Query 013019
Match_columns 451
No_of_seqs 424 out of 2737
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 08:42:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013019.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013019hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0626 MetC Cystathionine bet 100.0 2.9E-63 6.4E-68 507.8 30.6 295 151-447 6-302 (396)
2 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 3E-61 6.5E-66 496.5 31.5 291 154-447 1-294 (386)
3 COG2873 MET17 O-acetylhomoseri 100.0 2.9E-60 6.3E-65 469.8 26.9 294 151-448 6-332 (426)
4 PRK08114 cystathionine beta-ly 100.0 7.3E-59 1.6E-63 479.8 31.7 292 153-447 6-300 (395)
5 KOG0053 Cystathionine beta-lya 100.0 7.5E-58 1.6E-62 463.6 26.0 298 148-449 17-316 (409)
6 PRK05967 cystathionine beta-ly 100.0 6E-57 1.3E-61 465.8 30.8 289 152-447 12-300 (395)
7 PRK09028 cystathionine beta-ly 100.0 1.6E-56 3.5E-61 463.0 31.5 293 152-447 4-297 (394)
8 PRK06702 O-acetylhomoserine am 100.0 1.5E-54 3.3E-59 452.3 30.6 292 152-447 6-330 (432)
9 PRK08861 cystathionine gamma-s 100.0 1.8E-54 4E-59 447.3 30.4 285 152-447 5-290 (388)
10 TIGR01324 cysta_beta_ly_B cyst 100.0 1.3E-52 2.8E-57 432.3 31.9 286 155-447 1-286 (377)
11 PRK08249 cystathionine gamma-s 100.0 2.1E-52 4.6E-57 433.6 32.2 293 152-447 8-300 (398)
12 PRK07810 O-succinylhomoserine 100.0 2.8E-52 6.1E-57 433.3 32.2 292 152-447 15-307 (403)
13 PRK08248 O-acetylhomoserine am 100.0 6.3E-52 1.4E-56 433.9 31.1 294 152-448 8-334 (431)
14 PRK07812 O-acetylhomoserine am 100.0 1.3E-51 2.7E-56 431.8 31.5 293 152-447 13-337 (436)
15 PRK08045 cystathionine gamma-s 100.0 1.9E-51 4E-56 425.0 31.4 286 151-447 3-289 (386)
16 PRK07050 cystathionine beta-ly 100.0 2.3E-51 5.1E-56 425.3 31.8 292 152-446 9-301 (394)
17 PRK05613 O-acetylhomoserine am 100.0 1.6E-51 3.5E-56 431.1 30.9 292 153-447 14-342 (437)
18 TIGR01328 met_gam_lyase methio 100.0 3E-51 6.4E-56 424.2 31.4 293 152-447 3-297 (391)
19 PRK06084 O-acetylhomoserine am 100.0 3.4E-51 7.4E-56 427.8 31.4 292 152-446 2-327 (425)
20 PRK05939 hypothetical protein; 100.0 7.6E-51 1.7E-55 421.8 30.6 277 169-447 6-304 (397)
21 PRK07503 methionine gamma-lyas 100.0 1.1E-50 2.3E-55 421.5 31.4 291 153-446 10-302 (403)
22 PRK08134 O-acetylhomoserine am 100.0 2E-50 4.3E-55 422.7 32.0 293 152-447 8-333 (433)
23 TIGR02080 O_succ_thio_ly O-suc 100.0 3.5E-50 7.6E-55 415.0 31.2 285 152-447 3-288 (382)
24 PRK06176 cystathionine gamma-s 100.0 6E-50 1.3E-54 413.0 30.9 285 152-448 2-287 (380)
25 PRK07049 methionine gamma-lyas 100.0 8.8E-50 1.9E-54 417.4 32.1 293 153-447 18-333 (427)
26 PRK08133 O-succinylhomoserine 100.0 1.5E-49 3.3E-54 411.2 32.4 292 152-447 6-297 (390)
27 PRK08574 cystathionine gamma-s 100.0 8.4E-50 1.8E-54 412.6 30.1 288 151-447 1-289 (385)
28 TIGR01325 O_suc_HS_sulf O-succ 100.0 2.4E-49 5.1E-54 408.5 31.7 290 154-447 1-290 (380)
29 PRK07504 O-succinylhomoserine 100.0 2.4E-49 5.3E-54 410.8 32.0 292 152-447 10-302 (398)
30 PRK06234 methionine gamma-lyas 100.0 3.6E-49 7.8E-54 409.8 32.4 293 152-447 8-304 (400)
31 PRK07671 cystathionine beta-ly 100.0 4.1E-49 8.9E-54 406.4 32.1 284 152-447 2-286 (377)
32 PRK07269 cystathionine gamma-s 100.0 3.5E-49 7.7E-54 405.1 30.4 280 152-450 6-286 (364)
33 PRK05994 O-acetylhomoserine am 100.0 6E-49 1.3E-53 411.2 32.0 293 153-448 8-333 (427)
34 PRK08776 cystathionine gamma-s 100.0 1.3E-48 2.8E-53 406.1 31.7 286 152-448 12-298 (405)
35 PLN02509 cystathionine beta-ly 100.0 1.2E-48 2.6E-53 411.3 31.1 283 152-447 86-369 (464)
36 cd00614 CGS_like CGS_like: Cys 100.0 1.1E-48 2.4E-53 401.7 30.1 276 171-447 1-277 (369)
37 PRK06434 cystathionine gamma-l 100.0 1.1E-48 2.5E-53 403.4 30.0 282 152-439 8-290 (384)
38 PRK06767 methionine gamma-lyas 100.0 2.4E-48 5.3E-53 401.7 31.7 282 152-436 5-287 (386)
39 PRK07811 cystathionine gamma-s 100.0 2.1E-48 4.6E-53 402.5 31.1 286 152-447 12-298 (388)
40 TIGR01326 OAH_OAS_sulfhy OAH/O 100.0 3E-48 6.4E-53 405.1 30.8 292 153-447 2-325 (418)
41 TIGR01329 cysta_beta_ly_E cyst 100.0 4.6E-48 9.9E-53 398.7 30.3 283 153-448 1-284 (378)
42 PRK06460 hypothetical protein; 100.0 7.5E-48 1.6E-52 396.8 31.1 282 151-448 1-282 (376)
43 PRK07582 cystathionine gamma-l 100.0 1.3E-47 2.7E-52 393.8 29.8 281 152-447 3-284 (366)
44 PRK05968 hypothetical protein; 100.0 3.8E-47 8.1E-52 393.3 30.9 284 156-444 12-296 (389)
45 PRK08064 cystathionine beta-ly 100.0 4.4E-47 9.5E-52 392.9 30.7 285 152-448 6-291 (390)
46 PLN02242 methionine gamma-lyas 100.0 7.1E-47 1.5E-51 394.5 30.5 289 153-447 18-315 (418)
47 PRK08247 cystathionine gamma-s 100.0 1.5E-46 3.3E-51 385.7 31.4 277 150-438 2-279 (366)
48 TIGR00474 selA seryl-tRNA(sec) 99.9 1.8E-26 3.9E-31 242.7 24.7 212 210-427 122-371 (454)
49 PRK04311 selenocysteine syntha 99.9 2.3E-25 5.1E-30 234.9 22.1 213 210-428 127-377 (464)
50 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 3.2E-23 7E-28 214.2 25.9 252 176-433 25-305 (387)
51 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 5.5E-23 1.2E-27 210.0 25.5 222 205-432 39-285 (361)
52 PLN03227 serine palmitoyltrans 99.9 7.4E-23 1.6E-27 212.3 23.1 219 204-433 39-289 (392)
53 COG0436 Aspartate/tyrosine/aro 99.9 5.2E-22 1.1E-26 206.0 28.2 222 209-436 64-321 (393)
54 PRK07324 transaminase; Validat 99.9 5.8E-22 1.3E-26 204.0 25.5 223 202-432 56-300 (373)
55 PRK06207 aspartate aminotransf 99.9 1.2E-21 2.7E-26 203.7 26.8 214 211-430 83-327 (405)
56 PRK14807 histidinol-phosphate 99.9 1E-21 2.2E-26 200.2 25.3 222 203-431 52-286 (351)
57 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.3E-21 2.8E-26 201.0 24.6 214 209-428 50-288 (370)
58 COG0079 HisC Histidinol-phosph 99.9 7E-22 1.5E-26 202.4 22.0 224 203-433 50-287 (356)
59 PRK05957 aspartate aminotransf 99.9 2.9E-21 6.3E-26 199.6 25.9 215 210-430 69-309 (389)
60 PRK06290 aspartate aminotransf 99.9 4E-21 8.8E-26 200.4 25.3 215 207-427 78-323 (410)
61 PLN02721 threonine aldolase 99.9 4.2E-21 9.1E-26 194.2 24.7 221 207-431 37-281 (353)
62 PRK07681 aspartate aminotransf 99.9 4E-21 8.7E-26 199.1 25.0 212 210-427 69-312 (399)
63 cd06454 KBL_like KBL_like; thi 99.9 5.4E-21 1.2E-25 192.8 25.4 212 208-427 44-273 (349)
64 TIGR01822 2am3keto_CoA 2-amino 99.9 9.1E-21 2E-25 195.2 26.3 212 209-427 82-312 (393)
65 TIGR03540 DapC_direct LL-diami 99.9 8E-21 1.7E-25 195.4 25.8 217 205-427 61-310 (383)
66 PRK06348 aspartate aminotransf 99.9 8.5E-21 1.8E-25 195.7 25.9 220 205-430 60-310 (384)
67 cd06502 TA_like Low-specificit 99.9 7.4E-21 1.6E-25 191.3 23.6 218 208-429 30-269 (338)
68 PRK11658 UDP-4-amino-4-deoxy-L 99.9 9.1E-21 2E-25 195.7 24.8 211 208-429 31-276 (379)
69 TIGR01437 selA_rel uncharacter 99.9 5.1E-21 1.1E-25 196.6 22.6 221 208-433 43-288 (363)
70 PRK05764 aspartate aminotransf 99.9 2E-20 4.4E-25 192.8 26.9 216 210-431 68-315 (393)
71 PRK06108 aspartate aminotransf 99.9 2.4E-20 5.1E-25 191.3 26.9 214 212-431 67-309 (382)
72 PRK07179 hypothetical protein; 99.9 1.3E-20 2.8E-25 195.8 25.2 212 208-427 97-322 (407)
73 PRK08361 aspartate aminotransf 99.9 1.2E-20 2.7E-25 194.8 24.8 217 208-430 68-315 (391)
74 PRK09276 LL-diaminopimelate am 99.9 1.4E-20 3.1E-25 193.7 24.5 216 206-427 64-312 (385)
75 PLN03026 histidinol-phosphate 99.9 1.2E-20 2.5E-25 194.8 23.7 218 204-430 80-313 (380)
76 TIGR03537 DapC succinyldiamino 99.9 2E-20 4.3E-25 190.6 25.1 216 206-427 31-278 (350)
77 PRK01688 histidinol-phosphate 99.9 3.8E-21 8.3E-26 196.2 19.8 222 203-433 50-291 (351)
78 TIGR03588 PseC UDP-4-keto-6-de 99.9 2.9E-20 6.2E-25 191.5 25.2 213 208-431 27-282 (380)
79 PRK12414 putative aminotransfe 99.9 6E-20 1.3E-24 189.5 27.5 211 211-427 71-307 (384)
80 PRK04781 histidinol-phosphate 99.9 1.8E-20 3.8E-25 192.3 23.2 223 204-433 53-298 (364)
81 PRK04870 histidinol-phosphate 99.9 1.7E-20 3.8E-25 191.1 23.0 219 204-430 57-290 (356)
82 PRK10874 cysteine sulfinate de 99.9 3.4E-20 7.4E-25 191.9 25.4 219 210-432 63-320 (401)
83 PRK08960 hypothetical protein; 99.9 4.9E-20 1.1E-24 190.1 26.4 213 210-428 69-309 (387)
84 cd06453 SufS_like Cysteine des 99.9 2.6E-20 5.6E-25 190.4 23.9 218 212-433 45-300 (373)
85 PRK09147 succinyldiaminopimela 99.9 2.9E-20 6.2E-25 192.4 24.5 208 213-426 68-316 (396)
86 KOG0257 Kynurenine aminotransf 99.9 1.6E-20 3.5E-25 190.0 21.4 221 201-427 62-326 (420)
87 PRK08068 transaminase; Reviewe 99.9 5.3E-20 1.2E-24 190.0 25.8 218 204-427 63-313 (389)
88 PRK07682 hypothetical protein; 99.9 2.3E-20 5E-25 191.7 22.8 213 209-427 56-299 (378)
89 PRK05942 aspartate aminotransf 99.9 2.5E-20 5.4E-25 192.9 22.9 215 207-427 69-316 (394)
90 PLN02187 rooty/superroot1 99.9 9.4E-20 2E-24 193.0 27.6 216 209-430 107-360 (462)
91 PLN00145 tyrosine/nicotianamin 99.9 6.1E-20 1.3E-24 192.7 25.9 214 211-431 95-347 (430)
92 TIGR01140 L_thr_O3P_dcar L-thr 99.9 1.6E-20 3.5E-25 190.0 20.8 215 203-430 40-267 (330)
93 PLN00175 aminotransferase fami 99.9 1.4E-19 3.1E-24 188.9 28.0 210 212-427 93-332 (413)
94 PRK07337 aminotransferase; Val 99.9 4.9E-20 1.1E-24 190.1 24.3 210 212-427 69-306 (388)
95 PRK13392 5-aminolevulinate syn 99.9 3.9E-20 8.4E-25 192.4 23.6 213 207-427 87-319 (410)
96 COG0520 csdA Selenocysteine ly 99.9 5.3E-20 1.2E-24 191.5 24.6 235 209-449 65-338 (405)
97 PLN02483 serine palmitoyltrans 99.9 8.6E-20 1.9E-24 194.5 26.8 213 207-427 142-388 (489)
98 TIGR01141 hisC histidinol-phos 99.9 2.7E-20 5.8E-25 188.6 21.5 219 205-431 49-284 (346)
99 PRK15481 transcriptional regul 99.9 5E-20 1.1E-24 192.9 23.8 214 207-427 117-356 (431)
100 PRK06425 histidinol-phosphate 99.9 2.9E-20 6.3E-25 188.2 21.3 212 203-427 33-262 (332)
101 PRK07550 hypothetical protein; 99.9 6.6E-20 1.4E-24 189.0 24.2 213 212-430 69-312 (386)
102 PRK07366 succinyldiaminopimela 99.9 6.5E-20 1.4E-24 189.1 24.0 211 211-427 69-312 (388)
103 PTZ00433 tyrosine aminotransfe 99.9 1.3E-19 2.8E-24 188.9 26.3 219 205-430 69-331 (412)
104 PRK04635 histidinol-phosphate 99.9 1.6E-20 3.4E-25 191.7 19.1 218 204-431 54-290 (354)
105 TIGR03538 DapC_gpp succinyldia 99.9 5.3E-20 1.1E-24 190.2 23.2 216 206-427 59-316 (393)
106 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.3E-19 2.9E-24 183.2 25.6 214 208-432 16-256 (352)
107 PLN02656 tyrosine transaminase 99.9 1.3E-19 2.8E-24 188.8 25.7 213 210-429 73-324 (409)
108 TIGR00858 bioF 8-amino-7-oxono 99.9 1.5E-19 3.2E-24 182.7 25.3 212 209-428 60-289 (360)
109 PRK03158 histidinol-phosphate 99.9 3.3E-20 7.2E-25 189.1 20.3 214 206-427 60-292 (359)
110 PRK01533 histidinol-phosphate 99.9 3.6E-20 7.9E-25 190.4 20.6 214 205-427 59-292 (366)
111 PF00155 Aminotran_1_2: Aminot 99.9 1.1E-19 2.3E-24 184.8 23.8 219 204-430 37-297 (363)
112 PRK02610 histidinol-phosphate 99.9 6.9E-20 1.5E-24 188.4 22.3 220 205-431 61-308 (374)
113 TIGR03392 FeS_syn_CsdA cystein 99.9 1.6E-19 3.6E-24 186.6 25.1 218 211-432 61-317 (398)
114 PRK06225 aspartate aminotransf 99.8 2.5E-19 5.3E-24 184.4 26.1 220 204-430 59-300 (380)
115 TIGR02379 ECA_wecE TDP-4-keto- 99.8 4.6E-19 1E-23 183.0 28.2 210 209-428 30-272 (376)
116 COG1168 MalY Bifunctional PLP- 99.8 5.3E-19 1.2E-23 177.5 27.5 254 174-433 27-314 (388)
117 PRK08912 hypothetical protein; 99.8 1.4E-19 3E-24 186.7 24.2 217 205-427 57-305 (387)
118 PRK13355 bifunctional HTH-doma 99.8 1.9E-19 4.2E-24 193.0 26.0 218 207-431 181-437 (517)
119 PRK05664 threonine-phosphate d 99.8 1.1E-19 2.3E-24 184.1 22.6 208 205-427 45-262 (330)
120 PRK13034 serine hydroxymethylt 99.8 1.6E-19 3.4E-24 188.8 24.6 223 200-431 58-308 (416)
121 PF01041 DegT_DnrJ_EryC1: DegT 99.8 1.7E-19 3.7E-24 185.1 24.1 218 209-437 24-270 (363)
122 PRK07683 aminotransferase A; V 99.8 4E-19 8.7E-24 183.6 27.0 213 209-427 64-306 (387)
123 TIGR01264 tyr_amTase_E tyrosin 99.8 2E-19 4.3E-24 186.4 24.7 215 209-430 72-322 (401)
124 PLN02368 alanine transaminase 99.8 3.6E-19 7.7E-24 185.7 26.6 221 206-432 102-382 (407)
125 TIGR01265 tyr_nico_aTase tyros 99.8 3.3E-19 7.1E-24 185.2 26.3 216 209-431 72-325 (403)
126 PLN02855 Bifunctional selenocy 99.8 2E-19 4.4E-24 187.8 24.8 167 211-381 77-256 (424)
127 PRK10534 L-threonine aldolase; 99.8 2.5E-19 5.3E-24 180.7 24.6 217 204-427 27-266 (333)
128 PRK08153 histidinol-phosphate 99.8 1.1E-19 2.4E-24 186.7 22.3 215 206-427 63-293 (369)
129 PRK07309 aromatic amino acid a 99.8 3.2E-19 6.9E-24 184.5 25.9 211 212-427 69-310 (391)
130 PRK00950 histidinol-phosphate 99.8 5.4E-20 1.2E-24 187.4 19.8 191 205-403 64-266 (361)
131 PRK09082 methionine aminotrans 99.8 2.4E-19 5.2E-24 185.0 24.8 210 212-427 73-309 (386)
132 PRK03321 putative aminotransfe 99.8 4.6E-20 1E-24 187.6 19.2 215 205-427 52-286 (352)
133 PRK09295 bifunctional cysteine 99.8 2.3E-19 5E-24 186.3 24.6 219 210-432 67-325 (406)
134 TIGR01825 gly_Cac_T_rel pyrido 99.8 2.9E-19 6.2E-24 183.4 25.0 212 208-427 76-304 (385)
135 PLN00143 tyrosine/nicotianamin 99.8 3.8E-19 8.2E-24 185.3 26.2 212 211-429 75-325 (409)
136 PRK07568 aspartate aminotransf 99.8 3.7E-19 7.9E-24 183.7 25.7 213 211-430 67-311 (397)
137 PRK06939 2-amino-3-ketobutyrat 99.8 3.1E-19 6.8E-24 183.3 25.1 211 210-427 87-316 (397)
138 TIGR01977 am_tr_V_EF2568 cyste 99.8 3.3E-19 7.2E-24 182.2 25.1 221 210-432 44-294 (376)
139 TIGR01979 sufS cysteine desulf 99.8 2.2E-19 4.8E-24 185.7 24.0 219 210-432 62-319 (403)
140 PRK03967 histidinol-phosphate 99.8 1.3E-19 2.8E-24 184.0 21.6 213 203-427 48-274 (337)
141 PRK03317 histidinol-phosphate 99.8 1.2E-19 2.5E-24 186.0 21.0 217 204-427 59-298 (368)
142 PRK09105 putative aminotransfe 99.8 1.9E-19 4.2E-24 185.2 22.6 213 205-427 73-302 (370)
143 PRK02731 histidinol-phosphate 99.8 8.5E-20 1.8E-24 186.5 19.9 216 204-427 61-295 (367)
144 PRK05387 histidinol-phosphate 99.8 2.1E-19 4.6E-24 182.4 22.5 213 205-427 55-283 (353)
145 PRK07777 aminotransferase; Val 99.8 8.9E-19 1.9E-23 180.6 27.4 210 212-427 63-305 (387)
146 TIGR01976 am_tr_V_VC1184 cyste 99.8 3.3E-19 7.2E-24 183.9 24.1 168 210-382 60-239 (397)
147 PRK09148 aminotransferase; Val 99.8 3.9E-19 8.4E-24 184.9 24.8 217 205-427 62-311 (405)
148 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.3E-18 2.9E-23 179.2 28.4 210 209-428 30-271 (375)
149 PRK06107 aspartate aminotransf 99.8 1.1E-18 2.3E-23 181.3 27.8 213 212-430 76-317 (402)
150 TIGR01821 5aminolev_synth 5-am 99.8 3.3E-19 7.2E-24 184.8 24.0 211 209-427 89-318 (402)
151 PRK05166 histidinol-phosphate 99.8 2.1E-19 4.5E-24 184.6 21.8 216 204-427 65-302 (371)
152 PRK07865 N-succinyldiaminopime 99.8 2.6E-19 5.7E-24 183.1 22.4 204 213-427 65-295 (364)
153 PRK05958 8-amino-7-oxononanoat 99.8 7.3E-19 1.6E-23 179.7 25.6 213 207-427 81-310 (385)
154 TIGR03539 DapC_actino succinyl 99.8 3.8E-19 8.2E-24 181.7 23.0 211 206-427 51-289 (357)
155 cd00615 Orn_deC_like Ornithine 99.8 2.4E-19 5.2E-24 178.8 20.9 213 206-425 55-293 (294)
156 TIGR03576 pyridox_MJ0158 pyrid 99.8 7.4E-19 1.6E-23 179.6 24.5 204 209-425 53-271 (346)
157 PRK08056 threonine-phosphate d 99.8 3.5E-19 7.6E-24 181.9 21.9 216 206-431 51-287 (356)
158 PRK08363 alanine aminotransfer 99.8 2.3E-18 5E-23 178.3 28.2 217 209-431 69-319 (398)
159 PLN02651 cysteine desulfurase 99.8 3.4E-19 7.4E-24 182.4 21.8 222 209-436 42-287 (364)
160 PRK09265 aminotransferase AlaT 99.8 1.3E-18 2.7E-23 180.8 25.5 218 206-430 67-323 (404)
161 KOG1368 Threonine aldolase [Am 99.8 3E-19 6.4E-24 173.5 19.1 252 178-436 26-302 (384)
162 COG0399 WecE Predicted pyridox 99.8 9.1E-19 2E-23 179.2 23.7 211 209-430 33-271 (374)
163 PRK06959 putative threonine-ph 99.8 5.4E-19 1.2E-23 179.8 21.3 208 204-427 48-268 (339)
164 PRK08175 aminotransferase; Val 99.8 8.3E-19 1.8E-23 181.6 23.1 211 212-427 69-310 (395)
165 cd06451 AGAT_like Alanine-glyo 99.8 1.2E-18 2.7E-23 176.9 24.0 214 210-427 32-278 (356)
166 PRK13393 5-aminolevulinate syn 99.8 1.3E-18 2.8E-23 180.9 24.4 211 209-427 89-318 (406)
167 PLN02450 1-aminocyclopropane-1 99.8 8.9E-19 1.9E-23 185.8 23.3 217 205-427 80-347 (468)
168 PRK09064 5-aminolevulinate syn 99.8 1.4E-18 3E-23 180.4 23.8 212 208-427 89-319 (407)
169 PRK15407 lipopolysaccharide bi 99.8 2.6E-18 5.7E-23 180.8 26.1 209 209-429 62-330 (438)
170 PTZ00377 alanine aminotransfer 99.8 2.5E-18 5.4E-23 182.9 25.7 215 212-432 117-390 (481)
171 PRK07392 threonine-phosphate d 99.8 1.4E-18 3.1E-23 177.6 22.6 216 205-431 52-290 (360)
172 PRK06358 threonine-phosphate d 99.8 2.4E-18 5.3E-23 175.8 24.0 216 204-430 48-287 (354)
173 PLN02822 serine palmitoyltrans 99.8 2.1E-18 4.6E-23 183.5 24.1 214 209-430 153-390 (481)
174 COG2008 GLY1 Threonine aldolas 99.8 2.8E-18 6E-23 171.6 23.2 249 178-433 4-277 (342)
175 cd00609 AAT_like Aspartate ami 99.8 2.7E-18 5.9E-23 171.7 23.3 218 207-430 33-281 (350)
176 PRK08636 aspartate aminotransf 99.8 6E-18 1.3E-22 175.7 26.4 211 212-427 73-321 (403)
177 COG1104 NifS Cysteine sulfinat 99.8 1.1E-18 2.5E-23 177.6 20.0 231 195-430 29-283 (386)
178 PRK14809 histidinol-phosphate 99.8 2.8E-18 6.1E-23 175.1 23.1 212 206-426 61-291 (357)
179 PRK02948 cysteine desulfurase; 99.8 1.3E-18 2.8E-23 178.8 20.3 215 209-428 42-277 (381)
180 PRK14012 cysteine desulfurase; 99.8 3.1E-18 6.7E-23 177.8 23.0 217 210-431 49-288 (404)
181 PRK00011 glyA serine hydroxyme 99.8 3.4E-18 7.5E-23 177.9 23.1 214 208-427 65-302 (416)
182 cd00378 SHMT Serine-glycine hy 99.8 6.6E-18 1.4E-22 174.6 24.8 214 208-427 59-298 (402)
183 TIGR02006 IscS cysteine desulf 99.8 4.2E-18 9.2E-23 176.8 23.4 218 210-432 47-287 (402)
184 TIGR03403 nifS_epsilon cystein 99.8 2.9E-18 6.3E-23 176.4 21.8 221 207-432 36-283 (382)
185 PRK13238 tnaA tryptophanase/L- 99.8 5.2E-18 1.1E-22 179.5 24.0 215 203-427 73-335 (460)
186 PRK14808 histidinol-phosphate 99.8 3.2E-18 6.9E-23 173.8 21.0 208 204-427 50-272 (335)
187 PRK06836 aspartate aminotransf 99.8 9.6E-18 2.1E-22 173.7 24.8 211 210-427 73-319 (394)
188 PRK06855 aminotransferase; Val 99.8 1.7E-17 3.7E-22 174.2 26.3 213 212-430 75-328 (433)
189 PRK05839 hypothetical protein; 99.8 7.3E-18 1.6E-22 173.5 22.9 213 205-424 54-301 (374)
190 PLN02409 serine--glyoxylate am 99.8 9.8E-18 2.1E-22 174.3 23.4 169 210-382 42-224 (401)
191 TIGR03235 DNA_S_dndA cysteine 99.8 9.1E-18 2E-22 170.8 22.5 217 210-432 42-284 (353)
192 PRK07590 L,L-diaminopimelate a 99.8 7.3E-18 1.6E-22 175.4 22.2 214 208-427 74-335 (409)
193 COG0156 BioF 7-keto-8-aminopel 99.8 8.1E-18 1.8E-22 173.3 21.9 210 209-426 83-312 (388)
194 PRK08354 putative aminotransfe 99.8 1.1E-17 2.4E-22 167.9 22.3 163 211-387 41-208 (311)
195 PTZ00376 aspartate aminotransf 99.8 1.7E-17 3.8E-22 172.4 24.3 212 211-427 73-337 (404)
196 PLN02231 alanine transaminase 99.8 3.6E-17 7.8E-22 176.0 27.3 215 212-432 170-442 (534)
197 PF00266 Aminotran_5: Aminotra 99.8 1.9E-17 4E-22 169.8 22.7 221 208-432 41-299 (371)
198 cd01494 AAT_I Aspartate aminot 99.8 8.1E-18 1.8E-22 150.7 17.5 156 212-373 2-170 (170)
199 PRK00854 rocD ornithine--oxo-a 99.8 2.8E-17 6.1E-22 170.3 23.7 216 207-427 80-327 (401)
200 TIGR03542 DAPAT_plant LL-diami 99.8 2.1E-17 4.5E-22 171.6 22.7 214 208-427 73-328 (402)
201 cd00613 GDC-P Glycine cleavage 99.8 3.1E-17 6.6E-22 169.1 23.5 169 210-380 64-246 (398)
202 PLN02376 1-aminocyclopropane-1 99.8 4.1E-17 8.8E-22 174.3 25.0 209 213-427 97-354 (496)
203 PF01212 Beta_elim_lyase: Beta 99.8 1.4E-18 3E-23 173.4 12.9 239 186-430 7-273 (290)
204 PRK09440 avtA valine--pyruvate 99.8 1.8E-17 3.9E-22 172.6 21.7 193 206-403 69-293 (416)
205 cd00617 Tnase_like Tryptophana 99.8 2.5E-17 5.5E-22 172.7 22.8 214 204-427 49-310 (431)
206 PRK13479 2-aminoethylphosphona 99.8 4.1E-17 9E-22 166.8 23.8 213 211-427 38-284 (368)
207 PLN02607 1-aminocyclopropane-1 99.8 3E-17 6.4E-22 173.3 23.3 210 212-427 97-354 (447)
208 TIGR03402 FeS_nifS cysteine de 99.8 2.3E-17 5E-22 169.4 21.1 215 211-432 43-280 (379)
209 COG1167 ARO8 Transcriptional r 99.8 8.8E-17 1.9E-21 170.2 25.5 210 212-428 138-374 (459)
210 TIGR02326 transamin_PhnW 2-ami 99.8 7E-17 1.5E-21 164.9 23.5 213 211-427 36-283 (363)
211 PRK00451 glycine dehydrogenase 99.8 4.4E-17 9.6E-22 171.3 22.1 214 213-432 115-376 (447)
212 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 1.3E-16 2.7E-21 161.3 24.5 214 210-427 31-278 (355)
213 PRK09257 aromatic amino acid a 99.8 1.7E-16 3.7E-21 164.4 25.3 212 211-427 70-332 (396)
214 PLN02955 8-amino-7-oxononanoat 99.8 1.1E-16 2.4E-21 168.4 23.6 184 210-397 147-357 (476)
215 PRK07908 hypothetical protein; 99.8 8.3E-17 1.8E-21 163.8 21.3 209 205-430 52-278 (349)
216 cd06450 DOPA_deC_like DOPA dec 99.7 3.8E-17 8.1E-22 165.0 18.2 196 212-432 40-272 (345)
217 PLN02397 aspartate transaminas 99.7 1.9E-16 4E-21 166.0 23.5 213 210-427 91-355 (423)
218 TIGR03531 selenium_SpcS O-phos 99.7 4.8E-16 1E-20 163.2 25.1 212 210-427 105-344 (444)
219 PRK05937 8-amino-7-oxononanoat 99.7 2.8E-16 6E-21 161.6 22.9 211 208-426 54-283 (370)
220 PRK09275 aspartate aminotransf 99.7 2E-16 4.4E-21 169.2 21.6 144 228-375 163-328 (527)
221 PLN02672 methionine S-methyltr 99.7 5.8E-16 1.3E-20 175.6 25.5 211 212-427 736-989 (1082)
222 PRK13520 L-tyrosine decarboxyl 99.7 1.5E-15 3.3E-20 154.8 25.1 213 212-431 61-305 (371)
223 TIGR03812 tyr_de_CO2_Arch tyro 99.7 1.2E-15 2.7E-20 155.7 24.4 213 210-429 59-309 (373)
224 PF06838 Met_gamma_lyase: Meth 99.7 1.6E-15 3.6E-20 152.0 22.9 219 207-428 51-297 (403)
225 TIGR03801 asp_4_decarbox aspar 99.7 1.4E-15 3E-20 162.7 23.4 145 227-375 157-327 (521)
226 PRK04073 rocD ornithine--oxo-a 99.7 1.5E-15 3.2E-20 157.5 23.1 217 207-427 79-326 (396)
227 PLN03032 serine decarboxylase; 99.7 1.4E-15 3E-20 156.9 22.0 221 201-427 57-314 (374)
228 PRK03244 argD acetylornithine 99.7 2E-15 4.2E-20 156.4 23.2 224 204-432 79-329 (398)
229 PTZ00094 serine hydroxymethylt 99.7 1.5E-15 3.2E-20 160.5 22.3 216 208-430 74-324 (452)
230 PRK04366 glycine dehydrogenase 99.7 1.4E-15 3.1E-20 161.9 22.3 211 211-427 114-368 (481)
231 TIGR00707 argD acetylornithine 99.7 2E-15 4.3E-20 154.7 22.4 218 205-427 64-309 (379)
232 TIGR02618 tyr_phenol_ly tyrosi 99.7 3.4E-15 7.4E-20 155.7 24.0 217 201-427 64-328 (450)
233 PRK02769 histidine decarboxyla 99.7 3.2E-15 6.9E-20 154.7 23.7 231 203-437 58-320 (380)
234 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 5.1E-16 1.1E-20 161.1 16.8 211 208-425 64-315 (417)
235 PRK08637 hypothetical protein; 99.7 2E-14 4.4E-19 148.6 26.4 176 201-382 37-257 (388)
236 cd00610 OAT_like Acetyl ornith 99.7 1E-14 2.2E-19 151.0 24.0 215 208-426 77-331 (413)
237 PRK02627 acetylornithine amino 99.7 5E-15 1.1E-19 152.8 21.0 216 204-424 75-318 (396)
238 PLN03226 serine hydroxymethylt 99.7 2E-14 4.3E-19 152.8 25.9 218 208-432 74-337 (475)
239 PRK01278 argD acetylornithine 99.7 7.8E-15 1.7E-19 151.6 22.3 214 207-425 70-312 (389)
240 PTZ00125 ornithine aminotransf 99.7 2.3E-14 5E-19 148.3 24.3 216 208-426 71-317 (400)
241 KOG0259 Tyrosine aminotransfer 99.7 4.4E-14 9.5E-19 141.7 24.9 219 202-431 97-356 (447)
242 PRK13580 serine hydroxymethylt 99.7 9.2E-15 2E-19 154.3 21.2 214 208-428 89-359 (493)
243 PRK07505 hypothetical protein; 99.6 3.8E-14 8.1E-19 147.3 25.5 184 207-397 88-290 (402)
244 TIGR01814 kynureninase kynuren 99.6 1.5E-14 3.2E-19 150.5 22.3 159 212-374 73-248 (406)
245 KOG1549 Cysteine desulfurase N 99.6 6.6E-15 1.4E-19 151.0 19.0 173 195-374 71-257 (428)
246 COG0112 GlyA Glycine/serine hy 99.6 7.5E-15 1.6E-19 148.3 18.7 213 208-428 66-304 (413)
247 PLN02271 serine hydroxymethylt 99.6 2.3E-14 4.9E-19 152.4 22.6 213 208-427 188-454 (586)
248 PRK13237 tyrosine phenol-lyase 99.6 3.4E-14 7.3E-19 148.6 22.0 217 200-427 70-335 (460)
249 COG0075 Serine-pyruvate aminot 99.6 9.1E-14 2E-18 142.6 23.5 213 211-427 39-284 (383)
250 TIGR01788 Glu-decarb-GAD gluta 99.6 9.2E-14 2E-18 146.0 23.7 217 210-433 80-351 (431)
251 PRK05093 argD bifunctional N-s 99.6 1.6E-13 3.6E-18 142.6 23.5 216 208-427 80-323 (403)
252 PLN02414 glycine dehydrogenase 99.6 5.2E-14 1.1E-18 159.4 20.9 213 213-429 571-827 (993)
253 PF00464 SHMT: Serine hydroxym 99.6 3.7E-14 7.9E-19 146.7 17.8 215 208-428 60-320 (399)
254 PRK15029 arginine decarboxylas 99.6 9E-14 2E-18 153.7 21.9 211 208-428 203-465 (755)
255 PRK02936 argD acetylornithine 99.6 2.6E-13 5.7E-18 139.4 23.1 223 206-433 67-316 (377)
256 TIGR03246 arg_catab_astC succi 99.6 2.6E-13 5.7E-18 141.0 22.8 214 207-426 74-317 (397)
257 PLN02724 Molybdenum cofactor s 99.6 3.9E-13 8.5E-18 151.4 23.4 175 204-381 72-284 (805)
258 TIGR01885 Orn_aminotrans ornit 99.5 1.2E-12 2.6E-17 135.9 24.8 217 208-427 77-326 (401)
259 PRK13578 ornithine decarboxyla 99.5 3.6E-13 7.8E-18 147.8 21.2 211 210-430 174-442 (720)
260 COG1103 Archaea-specific pyrid 99.5 7.9E-13 1.7E-17 127.6 19.8 218 208-431 59-302 (382)
261 PRK12381 bifunctional succinyl 99.5 1.2E-12 2.7E-17 136.4 22.8 214 207-426 78-321 (406)
262 KOG0256 1-aminocyclopropane-1- 99.5 6.4E-13 1.4E-17 134.4 19.5 196 226-427 147-378 (471)
263 PF03841 SelA: L-seryl-tRNA se 99.5 2.8E-14 6.1E-19 144.4 9.1 210 214-429 51-298 (367)
264 PLN02263 serine decarboxylase 99.5 3.3E-12 7.1E-17 134.6 23.8 222 201-428 121-382 (470)
265 TIGR00461 gcvP glycine dehydro 99.5 1.6E-12 3.4E-17 146.0 21.6 217 213-437 533-792 (939)
266 KOG1360 5-aminolevulinate synt 99.5 1.1E-12 2.3E-17 132.2 17.7 210 210-427 216-446 (570)
267 TIGR03799 NOD_PanD_pyr putativ 99.5 5.2E-12 1.1E-16 135.6 24.0 203 228-436 162-428 (522)
268 TIGR00713 hemL glutamate-1-sem 99.5 2.8E-12 6E-17 134.2 21.3 223 207-434 85-347 (423)
269 COG0076 GadB Glutamate decarbo 99.5 4.1E-12 8.8E-17 134.4 21.3 218 214-438 105-372 (460)
270 PRK05367 glycine dehydrogenase 99.5 2E-12 4.3E-17 146.9 19.9 212 213-428 545-794 (954)
271 PLN02624 ornithine-delta-amino 99.5 5.1E-12 1.1E-16 134.6 21.2 198 206-406 113-341 (474)
272 KOG0633 Histidinol phosphate a 99.4 1.2E-12 2.6E-17 125.8 13.9 221 207-432 66-304 (375)
273 PRK04260 acetylornithine amino 99.4 1.1E-11 2.5E-16 127.5 22.2 219 210-433 66-314 (375)
274 COG4100 Cystathionine beta-lya 99.4 3.8E-12 8.2E-17 124.5 16.4 178 200-381 58-257 (416)
275 COG4992 ArgD Ornithine/acetylo 99.4 7.4E-12 1.6E-16 128.1 19.0 228 206-438 80-338 (404)
276 PLN02590 probable tyrosine dec 99.4 3.5E-11 7.6E-16 129.5 24.8 227 204-436 160-456 (539)
277 KOG1359 Glycine C-acetyltransf 99.4 2.1E-12 4.6E-17 125.9 13.7 175 210-393 112-298 (417)
278 PRK03080 phosphoserine aminotr 99.4 8.8E-12 1.9E-16 128.9 18.9 158 211-382 49-217 (378)
279 PLN02880 tyrosine decarboxylas 99.4 2.3E-11 4.9E-16 130.0 22.5 215 214-434 126-406 (490)
280 KOG2862 Alanine-glyoxylate ami 99.4 3E-11 6.6E-16 118.7 20.1 211 213-427 53-301 (385)
281 PRK04612 argD acetylornithine 99.4 3.4E-11 7.4E-16 125.9 21.8 228 207-437 79-340 (408)
282 PLN00144 acetylornithine trans 99.4 4.3E-11 9.3E-16 124.1 22.2 225 207-435 54-318 (382)
283 PRK15399 lysine decarboxylase 99.4 3.8E-11 8.3E-16 131.9 22.5 170 210-389 195-398 (713)
284 PRK15400 lysine decarboxylase 99.4 1.7E-11 3.6E-16 134.7 19.6 208 210-429 195-444 (714)
285 COG1921 SelA Selenocysteine sy 99.4 2.6E-11 5.6E-16 124.0 18.1 185 214-404 72-267 (395)
286 PRK05367 glycine dehydrogenase 99.4 3.2E-11 6.9E-16 137.3 20.0 158 213-380 124-292 (954)
287 PRK12566 glycine dehydrogenase 99.4 3.6E-11 7.7E-16 134.7 19.9 147 212-362 545-709 (954)
288 TIGR01366 serC_3 phosphoserine 99.3 2.6E-11 5.6E-16 124.8 17.1 213 210-431 41-284 (361)
289 PF00282 Pyridoxal_deC: Pyrido 99.3 3.2E-11 7E-16 124.7 17.8 221 208-434 73-361 (373)
290 TIGR02617 tnaA_trp_ase tryptop 99.3 8.7E-11 1.9E-15 122.2 20.6 238 178-427 46-344 (467)
291 KOG1357 Serine palmitoyltransf 99.3 7.9E-12 1.7E-16 127.9 10.4 210 210-427 182-424 (519)
292 PRK04013 argD acetylornithine/ 99.3 1.9E-10 4.1E-15 118.6 20.8 221 206-438 62-302 (364)
293 PRK03715 argD acetylornithine 99.3 2.5E-10 5.4E-15 118.9 21.6 210 207-425 75-315 (395)
294 cd00611 PSAT_like Phosphoserin 99.3 6.3E-11 1.4E-15 121.5 16.8 205 210-430 44-281 (355)
295 TIGR01364 serC_1 phosphoserine 99.3 3.6E-10 7.8E-15 115.9 21.3 205 210-430 37-273 (349)
296 PRK00062 glutamate-1-semialdeh 99.3 2.8E-10 6.1E-15 119.6 21.0 223 207-433 87-348 (426)
297 COG1982 LdcC Arginine/lysine/o 99.3 1.5E-10 3.3E-15 123.0 18.8 155 212-373 72-246 (557)
298 TIGR03372 putres_am_tran putre 99.3 6.5E-10 1.4E-14 117.4 23.4 229 207-438 114-382 (442)
299 PRK08117 4-aminobutyrate amino 99.3 4.8E-10 1E-14 118.0 22.4 230 206-437 82-360 (433)
300 PRK08088 4-aminobutyrate amino 99.3 5.5E-10 1.2E-14 117.3 22.6 230 207-438 81-353 (425)
301 PRK12403 putative aminotransfe 99.3 1.7E-09 3.7E-14 114.9 25.6 228 208-438 96-382 (460)
302 PLN02414 glycine dehydrogenase 99.2 4.5E-10 9.7E-15 127.8 21.2 158 212-379 150-319 (993)
303 PRK08593 4-aminobutyrate amino 99.2 1.8E-09 3.8E-14 114.3 24.3 228 207-438 82-361 (445)
304 PRK05964 adenosylmethionine--8 99.2 2.3E-09 4.9E-14 112.6 24.3 227 206-435 81-357 (423)
305 PRK06777 4-aminobutyrate amino 99.2 2.3E-09 5E-14 112.6 23.9 227 204-434 77-348 (421)
306 PF00202 Aminotran_3: Aminotra 99.2 8.6E-10 1.9E-14 112.6 19.9 230 205-438 54-331 (339)
307 PRK08360 4-aminobutyrate amino 99.2 2.5E-09 5.5E-14 113.0 23.9 226 208-437 82-357 (443)
308 COG0001 HemL Glutamate-1-semia 99.2 1.4E-09 3.1E-14 112.4 21.3 221 201-426 85-341 (432)
309 COG0403 GcvP Glycine cleavage 99.2 2.2E-09 4.8E-14 109.8 22.1 160 214-378 124-295 (450)
310 TIGR00700 GABAtrnsam 4-aminobu 99.2 3.5E-09 7.7E-14 111.1 24.4 231 204-438 70-351 (420)
311 PRK11522 putrescine--2-oxoglut 99.2 1.4E-09 2.9E-14 115.6 21.2 228 207-437 121-388 (459)
312 PRK07046 aminotransferase; Val 99.2 3.4E-09 7.4E-14 112.4 23.9 225 207-435 112-376 (453)
313 PRK09792 4-aminobutyrate trans 99.2 1.6E-09 3.5E-14 113.8 21.1 198 204-405 77-313 (421)
314 PRK05355 3-phosphoserine/phosp 99.2 8.5E-10 1.9E-14 113.6 18.0 204 210-428 48-282 (360)
315 PRK06105 aminotransferase; Pro 99.2 7.7E-09 1.7E-13 109.9 24.7 232 204-438 86-379 (460)
316 PRK07495 4-aminobutyrate amino 99.2 4.5E-09 9.7E-14 110.6 22.4 231 206-438 79-352 (425)
317 KOG0634 Aromatic amino acid am 99.2 2.8E-09 6.2E-14 109.0 19.7 154 226-385 124-321 (472)
318 PRK09221 beta alanine--pyruvat 99.1 6.3E-09 1.4E-13 110.1 22.7 228 207-437 89-378 (445)
319 PRK06541 hypothetical protein; 99.1 7.2E-09 1.6E-13 110.1 23.1 228 206-436 91-377 (460)
320 PRK13360 omega amino acid--pyr 99.1 1E-08 2.2E-13 108.5 23.8 229 207-438 86-376 (442)
321 PRK06058 4-aminobutyrate amino 99.1 1.2E-08 2.6E-13 107.9 24.2 226 207-436 96-371 (443)
322 PF02347 GDC-P: Glycine cleava 99.1 3E-09 6.5E-14 111.0 19.2 208 213-427 113-364 (429)
323 PRK12389 glutamate-1-semialdeh 99.1 1.5E-08 3.3E-13 106.6 24.6 228 207-438 90-357 (428)
324 PLN02760 4-aminobutyrate:pyruv 99.1 1.6E-08 3.5E-13 108.5 25.1 228 207-437 130-420 (504)
325 PRK07482 hypothetical protein; 99.1 2.7E-08 5.9E-13 105.7 25.5 230 206-438 90-382 (461)
326 TIGR00461 gcvP glycine dehydro 99.1 4.3E-09 9.3E-14 118.7 19.9 158 213-380 112-280 (939)
327 PRK07986 adenosylmethionine--8 99.1 1.8E-08 4E-13 106.1 23.6 229 206-438 82-364 (428)
328 PRK05965 hypothetical protein; 99.1 2.8E-08 6.1E-13 105.6 25.0 229 207-438 87-376 (459)
329 COG3977 Alanine-alpha-ketoisov 99.1 2.8E-09 6.1E-14 104.6 15.8 179 203-386 66-276 (417)
330 TIGR00709 dat 2,4-diaminobutyr 99.1 1.5E-08 3.3E-13 107.1 22.6 227 207-438 79-359 (442)
331 PRK06082 4-aminobutyrate amino 99.1 2E-08 4.3E-13 106.7 23.6 232 204-438 107-383 (459)
332 PRK06943 adenosylmethionine--8 99.1 2.2E-08 4.7E-13 106.2 23.2 230 206-438 93-382 (453)
333 PRK07678 aminotransferase; Val 99.1 2.6E-08 5.7E-13 105.6 23.7 228 207-437 86-373 (451)
334 PRK06918 4-aminobutyrate amino 99.0 3.3E-08 7.2E-13 104.7 23.1 196 207-406 94-335 (451)
335 PRK07480 putative aminotransfe 99.0 5.1E-08 1.1E-12 103.5 24.5 230 206-438 90-378 (456)
336 PLN02482 glutamate-1-semialdeh 99.0 2.7E-08 5.8E-13 106.1 22.0 215 208-426 137-386 (474)
337 PRK06173 adenosylmethionine--8 99.0 5E-08 1.1E-12 102.9 23.7 228 206-437 83-365 (429)
338 PRK06149 hypothetical protein; 99.0 6.1E-08 1.3E-12 111.7 26.0 230 204-438 618-900 (972)
339 TIGR01365 serC_2 phosphoserine 99.0 9E-09 2E-13 106.5 17.4 201 212-429 41-284 (374)
340 PRK05769 4-aminobutyrate amino 99.0 8.7E-08 1.9E-12 101.4 24.6 225 206-435 93-370 (441)
341 PRK00615 glutamate-1-semialdeh 99.0 2.4E-08 5.2E-13 105.3 20.2 214 207-425 90-340 (433)
342 PRK06062 hypothetical protein; 99.0 6.8E-08 1.5E-12 102.5 23.6 232 204-438 89-372 (451)
343 PRK09264 diaminobutyrate--2-ox 99.0 4.4E-08 9.6E-13 103.0 21.9 167 207-376 79-285 (425)
344 PRK05639 4-aminobutyrate amino 99.0 1.1E-07 2.3E-12 101.1 24.8 225 208-437 94-374 (457)
345 PRK07481 hypothetical protein; 99.0 1.2E-07 2.6E-12 100.5 25.0 229 207-438 83-375 (449)
346 TIGR02407 ectoine_ectB diamino 99.0 6.8E-08 1.5E-12 101.2 22.9 167 207-376 75-281 (412)
347 COG0160 GabT 4-aminobutyrate a 99.0 7.4E-08 1.6E-12 101.1 22.9 224 210-438 99-375 (447)
348 PRK07036 hypothetical protein; 99.0 1.6E-07 3.6E-12 100.0 25.6 229 207-438 92-382 (466)
349 PRK08742 adenosylmethionine--8 99.0 7.8E-08 1.7E-12 102.5 22.3 229 207-438 104-397 (472)
350 PRK05630 adenosylmethionine--8 99.0 1.2E-07 2.5E-12 99.8 23.4 228 207-438 80-361 (422)
351 PRK07030 adenosylmethionine--8 99.0 1.2E-07 2.6E-12 101.0 23.1 230 206-438 86-376 (466)
352 TIGR03811 tyr_de_CO2_Ent tyros 99.0 2E-07 4.3E-12 101.8 25.1 208 213-427 126-475 (608)
353 PRK06916 adenosylmethionine--8 98.9 1.2E-07 2.5E-12 100.9 22.1 229 207-438 96-385 (460)
354 COG3844 Kynureninase [Amino ac 98.9 1.5E-08 3.2E-13 100.7 14.0 160 213-373 79-244 (407)
355 COG1003 GcvP Glycine cleavage 98.9 2.1E-08 4.7E-13 102.8 15.1 211 211-427 110-364 (496)
356 PRK12566 glycine dehydrogenase 98.9 5E-08 1.1E-12 109.8 18.8 211 214-436 128-383 (954)
357 TIGR00508 bioA adenosylmethion 98.9 3.2E-07 7E-12 96.6 23.7 225 207-434 85-363 (427)
358 KOG1358 Serine palmitoyltransf 98.9 7.1E-09 1.5E-13 104.9 10.6 180 212-399 141-344 (467)
359 PRK06938 diaminobutyrate--2-ox 98.9 2E-07 4.4E-12 99.2 21.6 228 206-438 102-384 (464)
360 PRK07483 hypothetical protein; 98.9 2.2E-07 4.7E-12 98.4 21.7 229 207-438 70-359 (443)
361 COG0161 BioA Adenosylmethionin 98.9 2.6E-07 5.7E-12 96.7 21.5 230 205-438 83-375 (449)
362 PRK06209 glutamate-1-semialdeh 98.9 1.1E-07 2.4E-12 100.3 18.3 217 212-433 90-339 (431)
363 PRK06917 hypothetical protein; 98.8 6.6E-07 1.4E-11 94.8 23.5 230 206-438 70-359 (447)
364 KOG1402 Ornithine aminotransfe 98.8 2.5E-07 5.3E-12 92.2 18.6 214 209-427 100-347 (427)
365 COG1448 TyrB Aspartate/tyrosin 98.8 4.7E-07 1E-11 92.0 21.0 211 212-426 71-331 (396)
366 PRK06931 diaminobutyrate--2-ox 98.8 7.2E-07 1.6E-11 94.9 22.5 227 207-438 98-378 (459)
367 PRK06148 hypothetical protein; 98.8 9.2E-07 2E-11 102.4 24.3 230 205-438 658-940 (1013)
368 PLN02974 adenosylmethionine-8- 98.8 9.5E-07 2.1E-11 99.6 23.7 230 206-438 405-750 (817)
369 PLN02452 phosphoserine transam 98.7 4.2E-07 9.1E-12 93.9 17.1 205 210-430 52-288 (365)
370 KOG2467 Glycine/serine hydroxy 98.7 4.1E-07 9E-12 91.7 16.1 214 208-428 80-341 (477)
371 PF12897 Aminotran_MocR: Alani 98.7 2.9E-06 6.2E-11 86.7 22.1 198 210-415 69-314 (425)
372 KOG1401 Acetylornithine aminot 98.7 1.5E-06 3.3E-11 88.8 19.0 213 212-428 100-353 (433)
373 TIGR03251 LAT_fam L-lysine 6-t 98.6 2.1E-06 4.5E-11 90.7 19.8 162 206-374 81-299 (431)
374 KOG1404 Alanine-glyoxylate ami 98.6 1.3E-06 2.8E-11 88.9 16.2 229 204-438 86-367 (442)
375 PRK12462 phosphoserine aminotr 98.6 3.9E-06 8.5E-11 86.5 19.5 200 212-429 51-286 (364)
376 TIGR00699 GABAtrns_euk 4-amino 98.6 2.6E-06 5.7E-11 90.7 18.1 153 207-361 98-326 (464)
377 PRK08297 L-lysine aminotransfe 98.5 1.6E-05 3.5E-10 84.2 21.6 221 206-434 88-377 (443)
378 KOG0258 Alanine aminotransfera 98.5 1.7E-05 3.8E-10 80.7 20.0 212 212-432 115-387 (475)
379 PF05889 SLA_LP_auto_ag: Solub 98.4 3E-06 6.5E-11 87.1 13.7 153 226-385 75-250 (389)
380 KOG1383 Glutamate decarboxylas 98.3 2E-05 4.4E-10 81.9 14.9 212 215-433 125-379 (491)
381 KOG0629 Glutamate decarboxylas 98.2 2.9E-05 6.2E-10 80.0 14.2 202 226-433 160-419 (510)
382 KOG0628 Aromatic-L-amino-acid/ 97.9 0.00033 7.2E-09 73.0 16.3 237 192-433 91-399 (511)
383 PF04864 Alliinase_C: Allinase 97.8 9.6E-05 2.1E-09 74.7 9.9 174 211-396 44-233 (363)
384 KOG2040 Glycine dehydrogenase 97.8 0.00027 5.9E-09 76.0 13.5 215 212-430 584-839 (1001)
385 KOG2040 Glycine dehydrogenase 97.7 0.00012 2.5E-09 78.7 9.2 137 216-358 169-309 (1001)
386 COG3033 TnaA Tryptophanase [Am 97.7 0.0021 4.5E-08 65.4 17.1 212 202-427 73-346 (471)
387 KOG3846 L-kynurenine hydrolase 97.3 0.0036 7.7E-08 62.5 12.9 160 215-374 116-293 (465)
388 KOG1403 Predicted alanine-glyo 97.0 0.0048 1E-07 61.5 10.1 200 215-424 92-344 (452)
389 KOG1412 Aspartate aminotransfe 96.9 0.053 1.1E-06 54.5 16.4 150 228-381 102-279 (410)
390 KOG1411 Aspartate aminotransfe 96.7 0.058 1.3E-06 54.9 15.3 195 183-381 70-299 (427)
391 KOG3843 Predicted serine hydro 96.1 0.035 7.7E-07 54.6 9.2 152 226-385 76-252 (432)
392 PLN02994 1-aminocyclopropane-1 96.1 0.017 3.8E-07 52.5 6.8 50 212-261 98-153 (153)
393 COG1932 SerC Phosphoserine ami 95.7 0.18 4E-06 51.6 12.9 201 212-431 52-290 (365)
394 KOG1405 4-aminobutyrate aminot 90.7 3.2 6.9E-05 42.8 11.6 74 285-360 255-345 (484)
395 PF02310 B12-binding: B12 bind 89.1 1.2 2.6E-05 37.8 6.4 89 263-353 17-110 (121)
396 cd02067 B12-binding B12 bindin 83.9 6.8 0.00015 33.4 8.2 91 263-355 16-110 (119)
397 PF05368 NmrA: NmrA-like famil 82.4 6.5 0.00014 37.3 8.3 92 233-331 7-99 (233)
398 TIGR01305 GMP_reduct_1 guanosi 78.5 71 0.0015 33.0 14.4 126 228-354 97-241 (343)
399 PF01596 Methyltransf_3: O-met 78.3 9.8 0.00021 36.3 7.9 125 208-338 29-160 (205)
400 PLN02589 caffeoyl-CoA O-methyl 76.6 31 0.00067 33.9 11.1 124 209-338 64-195 (247)
401 KOG1663 O-methyltransferase [S 73.4 69 0.0015 31.3 12.2 121 208-334 57-184 (237)
402 PLN02476 O-methyltransferase 73.1 28 0.00062 34.8 10.0 124 208-337 102-232 (278)
403 cd02068 radical_SAM_B12_BD B12 72.9 21 0.00045 30.7 8.0 85 266-353 8-96 (127)
404 PRK05096 guanosine 5'-monophos 72.5 1.2E+02 0.0027 31.3 15.4 140 228-370 98-256 (346)
405 TIGR02026 BchE magnesium-proto 70.9 12 0.00026 40.4 7.3 85 266-353 28-121 (497)
406 cd04736 MDH_FMN Mandelate dehy 70.5 20 0.00043 37.3 8.4 86 264-353 226-317 (361)
407 PRK13396 3-deoxy-7-phosphohept 70.2 39 0.00084 35.1 10.4 65 296-360 236-316 (352)
408 PLN02781 Probable caffeoyl-CoA 67.0 1.2E+02 0.0026 29.3 12.7 126 209-338 53-183 (234)
409 cd00532 MGS-like MGS-like doma 66.7 52 0.0011 27.8 9.0 84 240-333 16-106 (112)
410 COG1606 ATP-utilizing enzymes 65.6 27 0.00058 34.6 7.7 100 226-337 19-124 (269)
411 cd00381 IMPDH IMPDH: The catal 65.4 1.6E+02 0.0036 29.9 15.3 176 173-353 33-225 (325)
412 PRK12595 bifunctional 3-deoxy- 65.1 92 0.002 32.4 12.1 97 264-361 216-331 (360)
413 cd01078 NAD_bind_H4MPT_DH NADP 63.7 1E+02 0.0022 28.4 11.2 105 226-339 29-134 (194)
414 TIGR03573 WbuX N-acetyl sugar 62.2 60 0.0013 33.3 10.1 116 213-335 43-169 (343)
415 PF00478 IMPDH: IMP dehydrogen 61.3 40 0.00086 35.0 8.4 119 242-363 113-247 (352)
416 PRK13397 3-deoxy-7-phosphohept 61.1 1E+02 0.0022 30.5 10.9 53 297-349 151-214 (250)
417 cd05013 SIS_RpiR RpiR-like pro 59.3 1E+02 0.0022 25.8 9.7 22 309-330 70-91 (139)
418 PRK08091 ribulose-phosphate 3- 59.0 1.3E+02 0.0027 29.4 11.0 109 243-353 85-206 (228)
419 PLN02274 inosine-5'-monophosph 58.9 68 0.0015 34.9 10.2 110 242-352 253-378 (505)
420 PF13460 NAD_binding_10: NADH( 57.2 62 0.0014 28.9 8.3 88 229-327 2-90 (183)
421 COG0552 FtsY Signal recognitio 57.0 67 0.0014 33.1 9.1 131 236-372 154-305 (340)
422 PRK14057 epimerase; Provisiona 56.3 1.3E+02 0.0028 29.9 10.7 72 281-353 141-220 (254)
423 PF15608 PELOTA_1: PELOTA RNA 55.6 48 0.001 28.1 6.6 66 263-334 22-88 (100)
424 PF14258 DUF4350: Domain of un 55.0 64 0.0014 24.7 6.9 60 267-332 11-70 (70)
425 COG1066 Sms Predicted ATP-depe 54.4 1.5E+02 0.0033 31.6 11.3 85 245-332 117-216 (456)
426 PTZ00314 inosine-5'-monophosph 53.6 83 0.0018 34.2 9.7 113 240-353 244-372 (495)
427 COG0673 MviM Predicted dehydro 53.3 44 0.00094 33.4 7.2 35 298-334 92-126 (342)
428 cd02071 MM_CoA_mut_B12_BD meth 52.9 68 0.0015 27.5 7.5 93 263-357 16-112 (122)
429 COG0296 GlgB 1,4-alpha-glucan 52.7 13 0.00028 41.4 3.4 39 297-337 200-238 (628)
430 COG1087 GalE UDP-glucose 4-epi 52.0 71 0.0015 32.6 8.2 103 228-334 2-118 (329)
431 cd02070 corrinoid_protein_B12- 50.4 2.1E+02 0.0045 26.8 10.9 88 264-355 100-192 (201)
432 PRK08745 ribulose-phosphate 3- 49.8 2E+02 0.0043 27.8 10.8 109 243-353 79-198 (223)
433 PRK05234 mgsA methylglyoxal sy 49.4 1.5E+02 0.0032 26.6 9.2 48 286-334 65-114 (142)
434 PRK08883 ribulose-phosphate 3- 48.1 1.6E+02 0.0036 28.2 9.9 107 243-353 75-194 (220)
435 TIGR01182 eda Entner-Doudoroff 47.9 1.8E+02 0.004 27.7 10.1 101 240-351 24-125 (204)
436 cd02065 B12-binding_like B12 b 47.5 1.7E+02 0.0036 24.4 9.0 85 264-353 17-104 (125)
437 smart00642 Aamy Alpha-amylase 46.9 20 0.00042 32.9 3.2 31 306-336 63-93 (166)
438 TIGR00640 acid_CoA_mut_C methy 46.8 1.1E+02 0.0025 26.9 7.9 93 258-353 14-111 (132)
439 PF01408 GFO_IDH_MocA: Oxidore 46.6 46 0.001 27.7 5.3 19 313-331 100-118 (120)
440 COG1748 LYS9 Saccharopine dehy 46.5 1.5E+02 0.0032 31.3 9.9 107 227-338 3-128 (389)
441 cd04795 SIS SIS domain. SIS (S 46.5 1.1E+02 0.0023 23.7 7.2 53 274-331 25-79 (87)
442 PF03435 Saccharop_dh: Sacchar 46.1 1.1E+02 0.0024 31.5 9.1 87 229-328 2-93 (386)
443 PRK07807 inosine 5-monophospha 45.5 1.4E+02 0.0029 32.4 9.8 114 238-352 228-357 (479)
444 CHL00200 trpA tryptophan synth 45.1 1.8E+02 0.0038 28.9 9.9 85 246-332 116-208 (263)
445 PRK11337 DNA-binding transcrip 44.7 2.3E+02 0.005 27.9 10.8 41 309-355 197-239 (292)
446 PF08423 Rad51: Rad51; InterP 44.6 91 0.002 30.6 7.7 39 295-333 132-185 (256)
447 COG0036 Rpe Pentose-5-phosphat 44.4 3.1E+02 0.0066 26.6 12.9 129 240-385 75-215 (220)
448 cd03332 LMO_FMN L-Lactate 2-mo 43.8 1E+02 0.0023 32.3 8.3 87 263-353 242-336 (383)
449 cd01121 Sms Sms (bacterial rad 43.7 1.7E+02 0.0036 30.6 9.9 53 279-331 141-205 (372)
450 TIGR00511 ribulose_e2b2 ribose 43.7 3.1E+02 0.0067 27.7 11.5 105 221-332 111-223 (301)
451 COG0367 AsnB Asparagine syntha 43.3 1.3E+02 0.0027 33.2 9.3 107 225-337 231-348 (542)
452 PRK05567 inosine 5'-monophosph 42.3 1.1E+02 0.0025 32.9 8.7 113 240-353 231-359 (486)
453 TIGR02990 ectoine_eutA ectoine 42.2 2.6E+02 0.0057 27.2 10.5 99 229-334 102-214 (239)
454 PF02142 MGS: MGS-like domain 41.9 41 0.00088 27.6 4.1 79 243-330 7-94 (95)
455 PRK08535 translation initiatio 41.6 3.2E+02 0.0069 27.7 11.3 105 221-332 116-228 (310)
456 PRK12724 flagellar biosynthesi 41.5 1.4E+02 0.003 31.9 8.9 90 246-337 249-346 (432)
457 PRK06843 inosine 5-monophospha 41.1 1.4E+02 0.0029 31.7 8.7 112 240-352 156-283 (404)
458 TIGR01302 IMP_dehydrog inosine 40.9 1.4E+02 0.003 32.0 8.9 109 243-352 230-354 (450)
459 COG1105 FruK Fructose-1-phosph 40.7 1.5E+02 0.0033 30.2 8.7 36 298-334 131-167 (310)
460 PRK04296 thymidine kinase; Pro 40.4 1E+02 0.0022 28.6 7.0 89 243-334 24-114 (190)
461 cd04726 KGPDC_HPS 3-Keto-L-gul 40.3 2.3E+02 0.005 26.0 9.5 107 244-352 72-184 (202)
462 PF00128 Alpha-amylase: Alpha 40.3 22 0.00047 34.5 2.6 30 306-335 45-74 (316)
463 PRK13307 bifunctional formalde 39.4 2.9E+02 0.0062 29.2 10.8 109 242-352 243-356 (391)
464 PF10087 DUF2325: Uncharacteri 38.4 1.1E+02 0.0025 25.0 6.3 62 265-333 14-82 (97)
465 PRK13937 phosphoheptose isomer 37.9 2.1E+02 0.0045 26.5 8.7 41 309-353 116-156 (188)
466 TIGR00649 MG423 conserved hypo 37.8 2.1E+02 0.0046 30.0 9.7 76 247-327 317-401 (422)
467 PRK10886 DnaA initiator-associ 37.8 2.5E+02 0.0054 26.5 9.2 44 286-334 101-144 (196)
468 TIGR01361 DAHP_synth_Bsub phos 37.6 3.1E+02 0.0068 27.0 10.3 89 271-359 129-238 (260)
469 TIGR00262 trpA tryptophan synt 37.6 2.7E+02 0.0057 27.4 9.8 108 243-352 109-225 (256)
470 PLN00191 enolase 37.6 2.2E+02 0.0047 30.7 9.7 97 234-333 297-395 (457)
471 COG2102 Predicted ATPases of P 37.4 4E+02 0.0086 25.9 11.5 146 228-389 4-174 (223)
472 TIGR00268 conserved hypothetic 37.3 3.3E+02 0.0072 26.4 10.4 110 213-337 3-118 (252)
473 TIGR03649 ergot_EASG ergot alk 37.2 1.8E+02 0.004 28.1 8.7 78 242-328 16-98 (285)
474 TIGR01303 IMP_DH_rel_1 IMP deh 37.1 3.2E+02 0.0069 29.6 11.0 115 238-353 226-356 (475)
475 PLN02672 methionine S-methyltr 37.0 1.2E+02 0.0027 36.1 8.4 124 204-334 419-565 (1082)
476 COG2185 Sbm Methylmalonyl-CoA 36.9 1.6E+02 0.0034 26.7 7.2 74 251-327 14-92 (143)
477 PRK09441 cytoplasmic alpha-amy 36.8 32 0.00069 37.0 3.4 31 305-335 73-103 (479)
478 TIGR03127 RuMP_HxlB 6-phospho 36.1 3E+02 0.0065 24.9 9.4 39 309-353 82-122 (179)
479 PRK11889 flhF flagellar biosyn 35.5 3.9E+02 0.0084 28.6 10.9 91 244-336 264-363 (436)
480 PTZ00081 enolase; Provisional 35.4 2.2E+02 0.0047 30.5 9.3 86 245-332 293-382 (439)
481 PF00834 Ribul_P_3_epim: Ribul 35.2 1.5E+02 0.0033 28.1 7.4 105 245-353 76-193 (201)
482 COG4122 Predicted O-methyltran 35.1 4.2E+02 0.0092 25.6 11.4 122 210-338 45-171 (219)
483 PLN03187 meiotic recombination 34.9 2.8E+02 0.006 28.7 9.7 43 291-333 216-273 (344)
484 TIGR02238 recomb_DMC1 meiotic 34.9 3.2E+02 0.0069 27.7 10.1 43 291-333 186-243 (313)
485 PRK09722 allulose-6-phosphate 34.8 3.7E+02 0.0081 26.1 10.1 120 226-353 63-196 (229)
486 cd05008 SIS_GlmS_GlmD_1 SIS (S 34.7 87 0.0019 26.4 5.2 39 309-353 56-96 (126)
487 PRK02705 murD UDP-N-acetylmura 34.4 2.9E+02 0.0063 29.1 10.2 97 228-333 3-99 (459)
488 COG1184 GCD2 Translation initi 34.1 5.2E+02 0.011 26.3 11.7 100 226-332 120-227 (301)
489 KOG1371 UDP-glucose 4-epimeras 34.1 1.1E+02 0.0023 31.6 6.3 103 228-331 4-124 (343)
490 PRK00077 eno enolase; Provisio 33.7 2.7E+02 0.0059 29.5 9.8 87 243-331 271-361 (425)
491 TIGR02402 trehalose_TreZ malto 33.7 36 0.00079 37.3 3.3 33 304-336 151-183 (542)
492 TIGR01060 eno phosphopyruvate 33.5 2.1E+02 0.0046 30.3 8.9 85 245-331 274-362 (425)
493 PRK11823 DNA repair protein Ra 33.3 3.2E+02 0.0069 29.2 10.2 53 279-331 139-203 (446)
494 PF01070 FMN_dh: FMN-dependent 33.0 1.2E+02 0.0026 31.5 6.7 87 263-353 214-308 (356)
495 PRK08335 translation initiatio 32.9 5.1E+02 0.011 25.9 12.1 109 217-332 101-217 (275)
496 PRK02261 methylaspartate mutas 32.8 2E+02 0.0042 25.5 7.3 69 264-334 21-93 (137)
497 COG0514 RecQ Superfamily II DN 32.8 3E+02 0.0065 30.7 10.0 121 203-336 14-142 (590)
498 PLN02535 glycolate oxidase 32.8 1.6E+02 0.0034 30.8 7.6 88 262-353 211-306 (364)
499 PRK06731 flhF flagellar biosyn 32.7 4.3E+02 0.0093 26.3 10.4 74 261-336 117-197 (270)
500 TIGR02370 pyl_corrinoid methyl 32.6 1.6E+02 0.0035 27.6 7.1 88 264-355 102-194 (197)
No 1
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-63 Score=507.84 Aligned_cols=295 Identities=39% Similarity=0.628 Sum_probs=273.7
Q ss_pred CCccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 013019 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (451)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv 230 (451)
..+.|+++|.|+..+ ..++++++|||+++||.|++.++..+.+.++..+|.|+|++|||++.||+++++|||++.++.
T Consensus 6 ~~~~T~~v~~g~~~~--~~~gav~~PI~~tStf~~~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~lE~~~a~LEg~~~~~a 83 (396)
T COG0626 6 LSLTTRLVHAGRRPD--DLTGAVNPPIYLTSTFVFDSAGEGLDAFAGEEGGYDYSRTGNPTRDALEEALAELEGGEDAFA 83 (396)
T ss_pred cccceeeEEcccccc--cCCCcccCCeeeeeeecccChhhhhhhccccccCcccccCCCccHHHHHHHHHHhhCCCcEEE
Confidence 357899999998753 468999999999999999999887666666677899999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcc
Q 013019 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (451)
Q Consensus 231 ~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG 310 (451)
|+|||+||.+++++++++||||++++..|++++.+++.+++++|++++++|..+.+++++++.+.+|++||+|+|+||++
T Consensus 84 fsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l 163 (396)
T COG0626 84 FSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPSNPLL 163 (396)
T ss_pred ecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHHHHHhcccCceEEEEeCCCCccc
Confidence 99999999999999999999999999999999999999999999999999998888888888743499999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHH-HHHHHHHHhH-hhC
Q 013019 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHH-VLG 388 (451)
Q Consensus 311 ~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~e-li~~lr~~~~-~~G 388 (451)
++.||++|+++||++|+++||||||++|++|+|+++|+|||++|+|||++||+|+++|+++++.+ +.+++...++ .+|
T Consensus 164 ~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G 243 (396)
T COG0626 164 EVPDIPAIARLAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTG 243 (396)
T ss_pred ccccHHHHHHHHHhcCCEEEEECCcccccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999998887654 5555555555 599
Q ss_pred CCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 389 ~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
..++|++||+++|||+||..||+++++||+++++||++||.|++|+||+|++||+|++.
T Consensus 244 ~~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~ 302 (396)
T COG0626 244 AVLSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELA 302 (396)
T ss_pred CCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999875
No 2
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=100.00 E-value=3e-61 Score=496.46 Aligned_cols=291 Identities=41% Similarity=0.712 Sum_probs=260.1
Q ss_pred cccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCC
Q 013019 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 233 (451)
Q Consensus 154 ~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sS 233 (451)
+|++||+|+..+. ..+++++||||+|+||.|++.+++ +.+.++..+|.|+|++||++..||++|++++|++.+++++|
T Consensus 1 ~T~~vh~g~~~~~-~~~~~v~~pi~~sstf~~~~~~~~-~~~~~~~~~~~Y~R~gnPt~~~le~~la~Le~g~~a~~~~S 78 (386)
T PF01053_consen 1 ETLLVHAGRDPDE-DQTGAVNPPIYQSSTFVFDSAEEL-DAFAGEEKGYIYSRYGNPTVRALEQRLAALEGGEDALLFSS 78 (386)
T ss_dssp HHHHHHTTTTGGT-STTTBSS--B---SBBBBSSHHHH-HHHTTSSSSCSBTTTC-HHHHHHHHHHHHHHT-SEEEEESS
T ss_pred CcceEeCCCCCCC-CCCCCeeCCccccccCcccchHHH-HhhcCCCCCcceeccccccHHHHHHHHHHhhcccceeeccc
Confidence 4899999987642 368899999999999999999998 77777888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccc
Q 013019 234 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 313 (451)
Q Consensus 234 G~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~ 313 (451)
||+||.+++++++++||+|++.+..|++++.+++..+.++|+++.++|..|+++|+++++++ |++||+|+|+||++++.
T Consensus 79 GmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l~~~l~~~-t~~v~~EspsNP~l~v~ 157 (386)
T PF01053_consen 79 GMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEALEAALRPN-TKLVFLESPSNPTLEVP 157 (386)
T ss_dssp HHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHHHHHHCTT-EEEEEEESSBTTTTB--
T ss_pred hHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHHHhhcccc-ceEEEEEcCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999984 99999999999999999
Q ss_pred cHHHHHHHHHhcC-CEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCH--HHHHHHHHHhHhhCCC
Q 013019 314 DVKLVSDLCHKKG-AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRNLHHVLGGA 390 (451)
Q Consensus 314 DL~~IaelA~~~g-~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~--eli~~lr~~~~~~G~~ 390 (451)
||++|+++||++| +++|||+||++|+.++|+++|+|+|++|+|||++||+|+++|+++.+. ++.++++..+..+|..
T Consensus 158 Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~ 237 (386)
T PF01053_consen 158 DLEAIAKLAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGAT 237 (386)
T ss_dssp -HHHHHHHHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B
T ss_pred cHHHHHHHHHHhCCceEEeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCcc
Confidence 9999999999999 999999999999999999999999999999999999999999999765 7888999999999999
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
++|+++|+++|+|+|+..||+++.+||++|++||++||.|++|+||+|++||++++.
T Consensus 238 ~~p~da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~ 294 (386)
T PF01053_consen 238 LSPFDAWLLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELA 294 (386)
T ss_dssp --HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHH
T ss_pred chHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeee
Confidence 999999999999999999999999999999999999999999999999999988764
No 3
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-60 Score=469.80 Aligned_cols=294 Identities=35% Similarity=0.567 Sum_probs=274.3
Q ss_pred CCccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 013019 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (451)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv 230 (451)
.+|+|+++|+|+. + ..+++...|||+|++|.|++.++..+.|..+..++.|+|..|||.+.||++|+.|||+-.++.
T Consensus 6 ~~f~T~~vHag~~-d--~~t~ara~PIyqtTsy~F~d~~haa~lF~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a 82 (426)
T COG2873 6 WGFETLAVHAGQE-D--PTTGARAVPIYQTTSYVFDDTDHAAALFGLKEPGNIYTRIMNPTTDVLEERIAALEGGVAALA 82 (426)
T ss_pred cCcchhhhcCCCC-C--CCCCceecceeeeeeeecCCHHHHHHHhCCCcCCceeeeccCchHHHHHHHHHHhhcchhhhh
Confidence 4699999999987 3 468999999999999999999999999988888999999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcc
Q 013019 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (451)
Q Consensus 231 ~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG 310 (451)
++|||+|+..++..+.++||+|+.....||+++.++...++++|++++|+|..|++.++++|+++ ||+||+|+..||-+
T Consensus 83 ~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~~aI~~n-Tkavf~EtigNP~~ 161 (426)
T COG2873 83 VASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFEAAIDEN-TKAVFAETIGNPGL 161 (426)
T ss_pred hccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHHHHhCcc-cceEEEEeccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999985 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCH--H-------------
Q 013019 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--K------------- 375 (451)
Q Consensus 311 ~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~--e------------- 375 (451)
.+.|+++|+++||++|+++|||||+++|+..+|+++|+|||+||+|||++|||..+||+|+-.- +
T Consensus 162 ~v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p 241 (426)
T COG2873 162 DVLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTP 241 (426)
T ss_pred cccCHHHHHHHHHHcCCcEEEecCCCcceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCC
Confidence 9999999999999999999999999999999999999999999999999999999999987210 0
Q ss_pred -----------------HHHHHH-HHhHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCC
Q 013019 376 -----------------LVTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITL 437 (451)
Q Consensus 376 -----------------li~~lr-~~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPg 437 (451)
++-+.| ...+.+|.+++|+.+|+++.||+||.+||+||++||+++++||++||+|.+|+|||
T Consensus 242 ~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~Ypg 321 (426)
T COG2873 242 DPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPG 321 (426)
T ss_pred CccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCC
Confidence 111222 34457899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccc
Q 013019 438 LLCFYNGTLVG 448 (451)
Q Consensus 438 L~~~p~~~lv~ 448 (451)
|++||.+.+..
T Consensus 322 L~~~~~h~la~ 332 (426)
T COG2873 322 LASHPYHALAK 332 (426)
T ss_pred CCCCcchhHHH
Confidence 99999988754
No 4
>PRK08114 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=7.3e-59 Score=479.77 Aligned_cols=292 Identities=26% Similarity=0.423 Sum_probs=272.6
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhccc-CCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR-ASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~-~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
++|+++|.|... ...+++++||||+|+||.|++.+++.+.+.++. .+|.|+|.+|||++.||++|++++|++.++++
T Consensus 6 ~~t~~~~~~~~~--~~~~~~v~~pi~~sstf~f~~~~~~~~~~~~~~~~~~~YsR~~nPt~~~le~~la~LEg~~~a~~~ 83 (395)
T PRK08114 6 LDTQLVNAGRSK--KYTQGSVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQEAMCELEGGAGCALY 83 (395)
T ss_pred cchheEeCCCCC--CCCCCCccCCeeCCCceecCCHHHHHHhhccCcCCCccccCCCChhHHHHHHHHHHHhCCCeEEEE
Confidence 679999999532 223489999999999999999988877665543 45999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|||+||.+++.+++++||+||+++..|++++.+++..++++|++++++|..|.++++++++++ ||+|++|+|+||+|.
T Consensus 84 ~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l~~~l~~~-TrlV~~EtpsNp~~~ 162 (395)
T PRK08114 84 PCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADIAKLIQPN-TKVVFLESPGSITME 162 (395)
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCCE
Confidence 9999999999999999999999999999999999988899999999999998999999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcC--CEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCC
Q 013019 312 CVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG 389 (451)
Q Consensus 312 v~DL~~IaelA~~~g--~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~ 389 (451)
+.||++|+++||++| ++++||+||++|+.++|+++|+|++++|+|||++||+|+++|+++.+++++++++..+..+|.
T Consensus 163 v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~ 242 (395)
T PRK08114 163 VHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQ 242 (395)
T ss_pred eecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccC
Confidence 999999999999984 999999999999999999999999999999999999999999999888888888888888999
Q ss_pred CccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
.++|+++|+++|||+||..||++|++||..+++||++||.|++|+||+|++||++++.
T Consensus 243 ~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~ 300 (395)
T PRK08114 243 MVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFW 300 (395)
T ss_pred CCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHH
Confidence 9999999999999999999999999999999999999999999999999999998764
No 5
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=7.5e-58 Score=463.57 Aligned_cols=298 Identities=39% Similarity=0.616 Sum_probs=275.6
Q ss_pred ccCCCccccccccCCcCCCCCCCCCccCCccccCCCccCCH-HHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCC
Q 013019 148 SFLSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKT-AELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAE 226 (451)
Q Consensus 148 ~~~~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~-~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae 226 (451)
++...++|.++|+|+..+.. ..++++||||.+.+++|+.. .+..... +..+|.|+|.+||++..||+.|++++|++
T Consensus 17 ~~~~~~~t~~~~~g~~~~~~-~~~~v~~pI~~~~s~tfk~~~~~~~~~~--~~~~~~Ysr~~nPt~~~le~~iaal~ga~ 93 (409)
T KOG0053|consen 17 SRLSHLDTNLLHAGQDPEKA-IHNAVAPPIYATLSTTFKQDLNEGEHGG--NLDGYDYSRSGNPTRDVLESGIAALEGAA 93 (409)
T ss_pred hhccccchhhhhcccccchh-ccccccCceecccceeecccCccccccc--cccccccccCCCCchHHHHHHHHHHhCCc
Confidence 34466999999999886543 57899999997777777765 3222111 11259999999999999999999999999
Q ss_pred cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCC
Q 013019 227 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (451)
Q Consensus 227 ~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPs 306 (451)
.+++++|||+|+..+++.|+++|++|++.+.+|++|+.+++.++.++|++.+++|..|++++++++++ +|++||+|+|+
T Consensus 94 ~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~~~~i~~-~t~~V~~ESPs 172 (409)
T KOG0053|consen 94 HALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKILKAIKE-NTKAVFLESPS 172 (409)
T ss_pred eEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHHHHhhcc-CceEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 49999999999
Q ss_pred CCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhH
Q 013019 307 NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHH 385 (451)
Q Consensus 307 NPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~ 385 (451)
||++++.||++|+++||++|+++||||||++|++++|+.+|||||++|+|||++||+|+++|.++.+ +++..+++..+.
T Consensus 173 NPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~ 252 (409)
T KOG0053|consen 173 NPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQE 252 (409)
T ss_pred CCccccccHHHHHHHHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999997 899999999999
Q ss_pred hhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccccc
Q 013019 386 VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLVGF 449 (451)
Q Consensus 386 ~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv~f 449 (451)
.+|.+++|+++|++.|+++|+.+|++++.+|+..+|++|+++|.|++|+||||++||+++++.+
T Consensus 253 ~lg~~~~p~~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~ 316 (409)
T KOG0053|consen 253 DLGWCEDPFDLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKR 316 (409)
T ss_pred HhcCCCCHHHHHHHhcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999988764
No 6
>PRK05967 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=6e-57 Score=465.82 Aligned_cols=289 Identities=30% Similarity=0.542 Sum_probs=269.2
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.. ...+|.|+|.+||+++.||+.|+.+++++.++++
T Consensus 12 ~~~t~~~~~~~~~~--~~~~~~~~Pi~~sst~~~~~~~~~~~----~~~~y~YsR~gnPt~~~Le~~la~le~~~~~v~~ 85 (395)
T PRK05967 12 GINTRLAHDGNDPG--DYHGFVNPPVVHASTVLFPDAETMAT----RGQKYTYGTRGTPTTDALCKAIDALEGSAGTILV 85 (395)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCChHHhhc----ccCCCccCCCCChHHHHHHHHHHHHhCCCCEEEE
Confidence 36899999996532 34689999999999999999887542 2357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|||+|+..++++++++||+||++++.|++++.++...++++|+++++++..+.++++++++++ ||+|++|+|+||++.
T Consensus 86 sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l~~al~~~-TklV~lesPsNP~l~ 164 (395)
T PRK05967 86 PSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGIAKLMRPN-TKVVHTEAPGSNTFE 164 (395)
T ss_pred CcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHhcCcC-ceEEEEECCCCCCCc
Confidence 9999999999999999999999999999999988888889999999999987788899999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCc
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 391 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~l 391 (451)
+.||++|+++||++|+++|+|+||++|+.++|+++|+|++++|+|||++||+|+++|+++++++++++++..+..+|..+
T Consensus 165 v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~ 244 (395)
T PRK05967 165 MQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCA 244 (395)
T ss_pred HHHHHHHHHHHHHhCCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988888888887788899999
Q ss_pred cHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 392 s~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
+|+++|+++|||+||..||++|++|+..|++||++||+|++|+||+|++||++++.
T Consensus 245 ~p~da~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~ 300 (395)
T PRK05967 245 GPDDTYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIW 300 (395)
T ss_pred CHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHH
Confidence 99999999999999999999999999999999999999999999999999998864
No 7
>PRK09028 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.6e-56 Score=462.95 Aligned_cols=293 Identities=29% Similarity=0.509 Sum_probs=270.2
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhccc-CCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR-ASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~-~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv 230 (451)
+++|+++|.|... ....++++||||+|+||.|++.+++.+.+.+.. .+|.|+|++||+...||++||++++++++++
T Consensus 4 ~~~t~~~~~~~~~--~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~~~~~~ 81 (394)
T PRK09028 4 KKATKIVSAGRDK--KWTKGVINPPVFRASTVVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGGAGTAL 81 (394)
T ss_pred CccceeEEcCCCC--CCCCCCccCCeeCCCCcccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 4789999999542 223489999999999999999988776554332 3588999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcc
Q 013019 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (451)
Q Consensus 231 ~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG 310 (451)
++|||+||.+++.+++++||+||++++.|++++.++...+.++|+++.+++..+.++++++++++ ||+|++|+|+||+|
T Consensus 82 ~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~~~l~~~-TklV~lespsNPtg 160 (394)
T PRK09028 82 YPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIRELIRPN-TKVLFLESPGSITM 160 (394)
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCC
Confidence 99999999999999999999999999999999988877788899999999887888999999874 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCC
Q 013019 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA 390 (451)
Q Consensus 311 ~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ 390 (451)
.+.|+++|+++||++|+++++|+||++++.++|+++|+|++++|+|||++||+|+++|+++.++++.++++..+..+|.+
T Consensus 161 ~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~ 240 (394)
T PRK09028 161 EVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQC 240 (394)
T ss_pred cHHHHHHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988888888888888889999
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
++|+++|+++|||+||..||++|++||+++++||++||.|++|+||||++||++++.
T Consensus 241 ~~p~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~ 297 (394)
T PRK09028 241 TSPDDVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFF 297 (394)
T ss_pred CCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHH
Confidence 999999999999999999999999999999999999999999999999999998874
No 8
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.5e-54 Score=452.29 Aligned_cols=292 Identities=28% Similarity=0.462 Sum_probs=264.4
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|... . .+++++||||+++||.|++.+++...++....+|.|+|.+||+++.||+.|++++|++.++++
T Consensus 6 ~~~t~~~~~g~~~--~-~~~~~~~PI~~sst~~f~~~~~~~~~~~~~~~g~~ysR~~nPtv~~lE~~la~leg~~~av~~ 82 (432)
T PRK06702 6 GKGTICVQGGYTP--K-NGEPRVLPLYQSTTYKYDTSDDLAALFNLEAEGYIYTRIGNPTLAAFEQKLAELEGGVGAVAT 82 (432)
T ss_pred CcchHheeCCCCC--C-CCCCccCCccCCcceecCCHHHHHHHHhccccCceeECCCCcHHHHHHHHHHHHhCCCcEEEE
Confidence 3689999999632 2 268999999999999999998877766555567899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-CCHHHHHHhhcCCCeEEEEEeCCCCCcc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFL 310 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-~D~d~Le~ai~~~~tklV~lesPsNPtG 310 (451)
+|||+||.+++.+++++||+||++.++|++|+.++...+..+|++++++|. .|+++++++|+++ ||+||+|+|+||++
T Consensus 83 ~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~~-Tk~I~~e~pgnP~~ 161 (432)
T PRK06702 83 ASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALANDK-TKLVYAESLGNPAM 161 (432)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCcC-CeEEEEEcCCCccc
Confidence 999999999999999999999999999999999988878899999999998 4899999999985 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCH----------HH----
Q 013019 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG----------KL---- 376 (451)
Q Consensus 311 ~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~----------el---- 376 (451)
.+.|+++|+++|+++|+++|+|+||++|+.++|+++|+|||++|+|||++||+|+++|+++... ++
T Consensus 162 ~v~Di~~I~~iA~~~gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~ 241 (432)
T PRK06702 162 NVLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPD 241 (432)
T ss_pred cccCHHHHHHHHHHcCCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999987422 11
Q ss_pred -----------------HHHHH-HHhHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCC
Q 013019 377 -----------------VTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLL 438 (451)
Q Consensus 377 -----------------i~~lr-~~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL 438 (451)
+.+.+ .....+|.+++|+++|+++++|+|++.|++++++|+.+|++||++||.|++|+||+|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl 321 (432)
T PRK06702 242 PSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGL 321 (432)
T ss_pred ccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCC
Confidence 11222 345567899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccc
Q 013019 439 LCFYNGTLV 447 (451)
Q Consensus 439 ~~~p~~~lv 447 (451)
++||++++.
T Consensus 322 ~~~p~~~l~ 330 (432)
T PRK06702 322 DSNENYSLA 330 (432)
T ss_pred CCCccHHHH
Confidence 999987754
No 9
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.8e-54 Score=447.29 Aligned_cols=285 Identities=28% Similarity=0.475 Sum_probs=262.9
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|...+ ..+++++||||+|+||.|++.. +..+|.|+|++||+...||++||+++|++.++++
T Consensus 5 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~--------~~~~~~Y~R~~npt~~~Le~~lA~leg~e~ivvt 74 (388)
T PRK08861 5 KPATIAVRTGIESD--SQYHAVVPPIYLSTNYGFPAFG--------EVPKYDYTRSGNPNRGLLEQTLSELESGKGAVVT 74 (388)
T ss_pred CcccceeECCCCCC--CCCCCccCCcccCcceEeCCcC--------ccCCccccCCCCchHHHHHHHHHHHhCCCeEEEE
Confidence 36899999996543 3358999999999999998742 2346999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+||++|+..++++++++||+|+++++.|++++.++...+...|+++.++|..|+++++++++++ +++|++|+|+||||.
T Consensus 75 ~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~i~~~-tklV~lesP~NPtG~ 153 (388)
T PRK08861 75 NCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAALDAALAKK-PKLILLETPSNPLVR 153 (388)
T ss_pred CCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999998887766667778999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G~~ 390 (451)
+.|+++|.++|+++|+++|+|++|+.++.++|+++|+|++++|+|||++||+|+++|+++++ +++.++++..+..+|..
T Consensus 154 v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~ 233 (388)
T PRK08861 154 VVDIAELCQKAKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGAT 233 (388)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCccccccCCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999988999999999999999999999999999999875 56778888888899999
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
++|+++|+++|||+||..||++|++||++|++||++||.|++|+||+|++||++++.
T Consensus 234 ~~p~~a~l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~ 290 (388)
T PRK08861 234 GTPFDSYMTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIA 290 (388)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHH
Confidence 999999999999999999999999999999999999999999999999999998764
No 10
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=1.3e-52 Score=432.35 Aligned_cols=286 Identities=27% Similarity=0.492 Sum_probs=262.1
Q ss_pred ccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCH
Q 013019 155 SLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASG 234 (451)
Q Consensus 155 t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG 234 (451)
|+++|.|...+ ..+++++||||+|+||.|++.++.. .+..+|.|+|++||+...||++||+++|++++++++||
T Consensus 1 t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~----~~~~~~~Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~sG 74 (377)
T TIGR01324 1 TRLIHSGRQPR--FSQGSVNPPLQRASTVLFDSHAAQR----RAKGELTYGRRGTLTHFALQDAMCELEGGAGCYLYPSG 74 (377)
T ss_pred CeeEECCCCCC--CCCCCccCCeeCCCceeeCChhhhc----CCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEECcH
Confidence 56789886532 2368999999999999999864432 23357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc
Q 013019 235 MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 314 (451)
Q Consensus 235 ~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D 314 (451)
|+|+..++.+++++||+||++++.|+++..++...++.+|+++++++..+.++++++++++ ||+|++|+|+||+|.+.|
T Consensus 75 ~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l~~~i~~~-tklV~lesp~Np~g~~~d 153 (377)
T TIGR01324 75 LAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDIATLIQPN-TKVLFLEAPSSITFEIQD 153 (377)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCCcHHH
Confidence 9999999999999999999999999998887766677889999998876668899999874 999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHH
Q 013019 315 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 394 (451)
Q Consensus 315 L~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~ 394 (451)
+++|+++|+++|+++|+|++|+.+..++|+++|+|++++|+|||++||+|+++|+++++++++++++.....+|..++|+
T Consensus 154 l~~I~~la~~~g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~ 233 (377)
T TIGR01324 154 IPAIAKAARNPGIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDAD 233 (377)
T ss_pred HHHHHHHHHHcCCEEEEECCCccccccCccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888887777889999999
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 395 AAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 395 ~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
++|+++|+++++..||+++++||++++++|++||.|++|+||+|++||++++.
T Consensus 234 ~a~~~~rgl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~ 286 (377)
T TIGR01324 234 DAYTTLRGLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFW 286 (377)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHH
Confidence 99999999999999999999999999999999999999999999999998764
No 11
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.1e-52 Score=433.57 Aligned_cols=293 Identities=39% Similarity=0.627 Sum_probs=272.2
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|+|...+ ..+++++||||+++||.|++.+++.+.+.++..+|.|+|+++|+.++||++|++++|++.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~ 85 (398)
T PRK08249 8 GVGTKAVWAGEKEY--LPYGATQVPVVLSVAYGYDDIDEWYDVALGKKPGHIYSRNTNPTVQAFEEKVRILEGAEAATAF 85 (398)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCCHHHHHHhhcCCcCCccccCCCChHHHHHHHHHHHHhCCCeEEEe
Confidence 36799999996532 3468999999999999999998777666555567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+||++|+..++.+++++||+|+++.+.|+++..++...++..|+++.++|..|+++++++++++ |++|++|+|+||+|.
T Consensus 86 ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l~~~i~~~-tklV~ie~p~NPtg~ 164 (398)
T PRK08249 86 STGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQIEAEIAKG-CDLLYLETPTNPTLK 164 (398)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHHHHhcCCC-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999999888877788899999999999999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCc
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 391 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~l 391 (451)
+.|+++|.++|+++|+++|+|++|+.++.++++.+|+|++++|+||+++||+|.++|+++++++++++++..+...|..+
T Consensus 165 v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~ 244 (398)
T PRK08249 165 IVDIERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATM 244 (398)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999888888889999999999999999999999999999999999998888889999
Q ss_pred cHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 392 s~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
+++.+|+++++++++..|++++.+|++.++++|++||.|++|+||||++||++++.
T Consensus 245 s~~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~ 300 (398)
T PRK08249 245 DPMSAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIA 300 (398)
T ss_pred CHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHH
Confidence 99999999999999999999999999999999999999999999999999998764
No 12
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=100.00 E-value=2.8e-52 Score=433.34 Aligned_cols=292 Identities=35% Similarity=0.532 Sum_probs=269.4
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|+|... ..++++++|||+++||.|++.+++.+.+.++..+|.|+||+||+.+.||++||+++|.++++++
T Consensus 15 ~~~t~~~~~~~~~---~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~al~~ 91 (403)
T PRK07810 15 SQATIGVRGGLLR---SGFEETAEALYLTSGYVYESAAAAEAAFTGELDRFVYSRYGNPTVSMFEERLRLIEGAEACFAT 91 (403)
T ss_pred CcchhheeCCCCC---CCCCCccCCccCCCccccCCHHHHHHHhccCcCCcceeCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 5789999999642 2367899999999999999998877666555567889999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|||+|+..++.+++++||+|++++..|++++..+...++..|+++.++|..|+++++++++++ +++|++|+|+||+|.
T Consensus 92 ~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~-tklV~~esp~Nptg~ 170 (403)
T PRK07810 92 ASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQWEEALSVP-TQAVFFETPSNPMQS 170 (403)
T ss_pred CChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCCe
Confidence 9999999999999999999999999999999988888888899999999999999999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHH-HHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~-~lr~~~~~~G~~ 390 (451)
+.|+++|.++|+++|+++|+|++|+.++.++++++|+|++++|+||+++||||++||+++++++++. +++.+...+|..
T Consensus 171 v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~ 250 (403)
T PRK07810 171 LVDIAAVSELAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPA 250 (403)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999998889999999999999999999999999999999887665 577677788999
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
++++++|+++++|+++..|++++.+|+.++++||++||+|++|+||||++||++++.
T Consensus 251 ~s~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~ 307 (403)
T PRK07810 251 LSAFNAWVLLKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLA 307 (403)
T ss_pred CCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHH
Confidence 999999999999999999999999999999999999999999999999999977654
No 13
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=6.3e-52 Score=433.90 Aligned_cols=294 Identities=34% Similarity=0.541 Sum_probs=266.5
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|...+ ..++++++|||+|+||.|++.+++.+.+.....+|.|+|++||+...||++|++++|.+.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~leg~~~al~~ 85 (431)
T PRK08248 8 RLETLAIHAGQEID--PTTGSRAVPIYQTTSYGFRDSEHAANLFSLKEFGNIYTRIMNPTTDVFEKRIAALEGGIGALAV 85 (431)
T ss_pred CcchhheeCCcCCC--CCCCCccCCeeCCCccccCCHHHHHhhhccccCCceeECCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 36799999996532 3468999999999999999999888776655567899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|||+|+..++.+++++||+|+++++.|++++..+...++.+|+++.++|..|+++++++++++ +++|++++|+||+|.
T Consensus 86 ~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l~~ai~~~-tklV~l~sp~NPtG~ 164 (431)
T PRK08248 86 SSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENFEAAITDK-TKALFAETIGNPKGD 164 (431)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999999988888888999999999999999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHH---------------
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL--------------- 376 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~el--------------- 376 (451)
+.|+++|.++|+++|+++|+|++|+.+..+.|+++|+|++++|+||+++||+|++||+++.+.+.
T Consensus 165 v~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~ 244 (431)
T PRK08248 165 VLDIEAVAAIAHEHGIPLIVDNTFASPYLLRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPD 244 (431)
T ss_pred ccCHHHHHHHHHHcCCEEEEeCCCCccccCChhHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCc
Confidence 99999999999999999999999999888899999999999999999999999999998864321
Q ss_pred ------------------HHHHHHHhHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCC
Q 013019 377 ------------------VTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLL 438 (451)
Q Consensus 377 ------------------i~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL 438 (451)
.+.++.....+|..++|++||+++|||+||+.|++++++||.+|+++|++||+|++|+||+|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl 324 (431)
T PRK08248 245 PSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGL 324 (431)
T ss_pred cccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCC
Confidence 11223455678999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccc
Q 013019 439 LCFYNGTLVG 448 (451)
Q Consensus 439 ~~~p~~~lv~ 448 (451)
++||++.+..
T Consensus 325 ~s~p~~~~~~ 334 (431)
T PRK08248 325 PSHPSYELAK 334 (431)
T ss_pred CCCccHHHHH
Confidence 9999987643
No 14
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.3e-51 Score=431.75 Aligned_cols=293 Identities=35% Similarity=0.523 Sum_probs=264.0
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.....+|.|+|++||+.+.||+.|++++|.+.++++
T Consensus 13 ~~~t~~~~~~~~~~--~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Ysr~~~p~~~~Le~~lA~l~g~~~av~~ 90 (436)
T PRK07812 13 SFETKQIHAGQTPD--PATNARALPIYQTTSYTFDDTDHAAALFGLAEPGNIYTRIMNPTQDVVEQRIAALEGGVAALLL 90 (436)
T ss_pred CcchhheeCCCCCC--CCCCCccCCCcCCCCcccCCHHHHHHhhcCCcCCccccCCCCchHHHHHHHHHHHhCCCeEEEE
Confidence 37899999996532 2368999999999999999998877766655567899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-CCCHHHHHHhhcCCCeEEEEEeCCCCCcc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFL 310 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd-~~D~d~Le~ai~~~~tklV~lesPsNPtG 310 (451)
+|||+|+.+++.+++++||+|+++...|++++.++...+.+.|+++.+++ ..|+++++++++++ +++|++|+|+||+|
T Consensus 91 sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~l~~ai~~~-tklV~ie~~sNp~G 169 (436)
T PRK07812 91 ASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDAWRAAVRPN-TKAFFAETISNPQI 169 (436)
T ss_pred ccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHHHHHhCCCC-CeEEEEECCCCCCC
Confidence 99999999999999999999999999999999888777788999999985 66899999999875 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHH---------------
Q 013019 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--------------- 375 (451)
Q Consensus 311 ~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~e--------------- 375 (451)
.+.|+++|.++||++|+++|+|+|+++++.++++++|+|++++|+||+++|||++++|+++.+..
T Consensus 170 ~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~ 249 (436)
T PRK07812 170 DVLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPD 249 (436)
T ss_pred eecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999886321
Q ss_pred ---------------HHHHHH-HHhHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCC
Q 013019 376 ---------------LVTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLL 439 (451)
Q Consensus 376 ---------------li~~lr-~~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~ 439 (451)
++.+++ ..+...|..++|+++|+++|||+||..|++++++||.+|+++|++||+|++|+||||+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~ 329 (436)
T PRK07812 250 PSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLP 329 (436)
T ss_pred cccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCC
Confidence 111222 3455789999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccc
Q 013019 440 CFYNGTLV 447 (451)
Q Consensus 440 ~~p~~~lv 447 (451)
+||++++.
T Consensus 330 s~p~~~~~ 337 (436)
T PRK07812 330 SSPWYERA 337 (436)
T ss_pred CCccHHHH
Confidence 99998764
No 15
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.9e-51 Score=424.97 Aligned_cols=286 Identities=30% Similarity=0.499 Sum_probs=262.7
Q ss_pred CCccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 013019 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (451)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv 230 (451)
++++|+++|.|...+ ..+++++||||+++||.|++.++ ..+|.|+||+||+.+.|+++||+++|.+++++
T Consensus 3 ~~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~--------~~~~~Y~R~~~pt~~~L~~~lA~l~g~~~~i~ 72 (386)
T PRK08045 3 RKQATIAVRSGLNDD--EQYGCVVPPIHLSSTYNFTGFNE--------PRAHDYSRRGNPTRDVVQRALAELEGGAGAVL 72 (386)
T ss_pred CCcccceeEcCCCCC--CCCCCccCCccCCcceecCCccc--------cCCceeeCCCCccHHHHHHHHHHHhCCCeEEE
Confidence 457899999996532 34689999999999999987542 23689999999999999999999999989999
Q ss_pred eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcc
Q 013019 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (451)
Q Consensus 231 ~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG 310 (451)
++||++|+..++.+++++||+|+++++.|++++..+.......++++.+++..|+++++++++++ +++|++|+|+||||
T Consensus 73 ~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~l~~~-tklV~l~sP~NPtG 151 (386)
T PRK08045 73 TNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEK-PKLVLVESPSNPLL 151 (386)
T ss_pred ECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHHHHhcccC-CeEEEEECCCCCCC
Confidence 99999999999999999999999999999998888877777777888888888999999999874 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCC
Q 013019 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG 389 (451)
Q Consensus 311 ~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~ 389 (451)
.+.|+++|.++|+++|+++|+|++|+.+..++|+++|+|++++|+|||++||+|+++|++++ +++++++++..+..+|.
T Consensus 152 ~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~ 231 (386)
T PRK08045 152 RVVDIAKICHLAREAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGV 231 (386)
T ss_pred EecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999998889999999999999999999999999999877 57888999888888999
Q ss_pred CccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
+++++++|+++|+|+++..|++++.+|+++|++||++||.|++|+||+|++||++++.
T Consensus 232 ~~~p~~~~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~ 289 (386)
T PRK08045 232 TGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIA 289 (386)
T ss_pred CCCHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHH
Confidence 9999999999999999999999999999999999999999999999999999998874
No 16
>PRK07050 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=2.3e-51 Score=425.34 Aligned_cols=292 Identities=22% Similarity=0.406 Sum_probs=269.3
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.++..+|.|+||+||+.++||+++++++|.+.++++
T Consensus 9 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~Le~~lA~l~g~~~~l~~ 86 (394)
T PRK07050 9 ALQTRIVQPDDQIP--PGFRSFVTPVARASTVVFPDLATMRALDWRQDVQWRYGLHATPTSLALAQRLAEIEGGRHALLQ 86 (394)
T ss_pred CccchheECCCCCC--CCCCCccCCeeCCcceecCCHHHHHhhcccccCCcccCCCCCHHHHHHHHHHHHHhCCCeEEEe
Confidence 47899999996532 3468999999999999999998877655545567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|||+|+.+++.+++++||+||++++.|++++.++...+..+|+++.+++..+.++++++++++ |++|++|+|+||+|.
T Consensus 87 ~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l~~~i~~~-tklV~le~p~Np~~~ 165 (394)
T PRK07050 87 PSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGIADLIQPN-TRLIWLEAPGSVTME 165 (394)
T ss_pred ccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCcc
Confidence 9999999999999999999999999999999887777778889999999887788999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ 390 (451)
+.|+++|+++|+++|+++|+|++|+.+..++++++|+|++++|+||+++||+|+++|++++ +++++++++..+..+|.+
T Consensus 166 ~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~ 245 (394)
T PRK07050 166 VPDVPAITAAARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIG 245 (394)
T ss_pred HhhHHHHHHHHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999999999998997776 578889999888888999
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTL 446 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~l 446 (451)
++++++|+++++|+++..|++++++|+++|++||++||+|.+|+||+|++||++.+
T Consensus 246 ~~~~~a~l~lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~ 301 (394)
T PRK07050 246 VSADDCSLVLRGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAF 301 (394)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHH
Confidence 99999999999999999999999999999999999999999999999999998765
No 17
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.6e-51 Score=431.05 Aligned_cols=292 Identities=31% Similarity=0.439 Sum_probs=262.6
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 013019 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (451)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~s 232 (451)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.....+|.|+|+++|+.+.||+.|++++|++.+++++
T Consensus 14 ~~t~~~~~~~~~~--~~~~~~~~Pi~~sstf~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~le~~la~l~g~~~~v~fs 91 (437)
T PRK05613 14 FETRSIHAGQSVD--SDTSARNLPIYQTTSYVFDSAEHAKQRFALEDLGPIYSRLTNPTVEALENRIASLEGGVHAVAFA 91 (437)
T ss_pred cchHheeCCCCCC--CCCCCccCCEeCCCCcccCCHHHHHHhhccccCCceeeCccChHHHHHHHHHHHHhCCCeEEEeC
Confidence 6899999996532 34689999999999999999988776555455679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-CCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 233 SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd-~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
|||+|+.+++.+++++||+||+++..|+++...+...+.++|+++.++| ..|+++++++++++ |++|++|+++||+|.
T Consensus 92 SG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~l~~~l~~~-tk~V~~e~~~Np~~~ 170 (437)
T PRK05613 92 SGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPESWQAAVQPN-TKAFFGETFANPQAD 170 (437)
T ss_pred CHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHHHHHhCCcc-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999998777777888999999997 56899999999885 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHH----------------
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 375 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~e---------------- 375 (451)
+.|+++|+++|+++|+++|+|+|++.+..++++++|+|++++|+||+++||++.+||+++.+.+
T Consensus 171 v~di~~I~~la~~~gi~livD~t~a~g~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~ 250 (437)
T PRK05613 171 VLDIPAVAEVAHRNQVPLIVDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYF 250 (437)
T ss_pred ccCHHHHHHHHHHcCCeEEEECCCccccccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCC
Confidence 9999999999999999999999999988899999999999999999999999999999986422
Q ss_pred -------------------HH-HHHHHHhHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEec
Q 013019 376 -------------------LV-TQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFI 435 (451)
Q Consensus 376 -------------------li-~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~y 435 (451)
++ +........+|..++|+++|+++|||+||..||+++++||.+|++||++||+|++|+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~y 330 (437)
T PRK05613 251 VTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNF 330 (437)
T ss_pred CCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEEC
Confidence 01 1122455678999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccc
Q 013019 436 TLLLCFYNGTLV 447 (451)
Q Consensus 436 PgL~~~p~~~lv 447 (451)
|+|++||++++.
T Consensus 331 Pgl~~~p~~~~~ 342 (437)
T PRK05613 331 AGLKDSPWYATK 342 (437)
T ss_pred CCCCCCccHHHH
Confidence 999999998765
No 18
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=100.00 E-value=3e-51 Score=424.18 Aligned_cols=293 Identities=34% Similarity=0.558 Sum_probs=269.7
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|...+ ..+++++||||+++||.|++.+++.+.+.+...+|.|+||+||+.+.||++||+++|.+.++++
T Consensus 3 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~av~~ 80 (391)
T TIGR01328 3 TFATRAIHAGYPPK--DQFGALTPPIYQTSTFVFDSCEQGGNRFAGQESGYIYSRLGNPTVSNLEGRIAFLEGTEAAVAT 80 (391)
T ss_pred CcccceeeCCccCC--CCCCCccCCcccCcceecCChHHHHHhhcCCcCCCceeCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 46899999996532 3468999999999999999998887766555567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+||++|+..++.+++++||+|+++++.|++++..+...+..+|+++.++|..|+++++++++++ |++|++|+|+||+|.
T Consensus 81 ~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l~~~i~~~-tklV~le~p~Np~G~ 159 (391)
T TIGR01328 81 SSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEVKAHIKDN-TKIVYFETPANPTMK 159 (391)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhhccC-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999999888888788899999999999999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh--HhhCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGG 389 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~--~~~G~ 389 (451)
+.|+++|.++|+++|+++|+|++|+.++.++++..|+|++++|+||+++|++++++|+++++++++++++... ...|.
T Consensus 160 v~dl~~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~ 239 (391)
T TIGR01328 160 LIDMERVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGS 239 (391)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999988888889999999999999999999988999999999999888643 24577
Q ss_pred CccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
.++++.+|+++++|+++..|++++.+|++.++++|++||+|+.|+||+|++||++++.
T Consensus 240 ~l~~~~a~l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~ 297 (391)
T TIGR01328 240 VISPFDAWLILRGLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIA 297 (391)
T ss_pred CCCcHHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHH
Confidence 8999999999999999999999999999999999999999999999999999998864
No 19
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=3.4e-51 Score=427.78 Aligned_cols=292 Identities=33% Similarity=0.509 Sum_probs=262.4
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|+++|+.+.||++|++++|.+.++++
T Consensus 2 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~g~~~~l~~ 79 (425)
T PRK06084 2 KLETLAIHAGYSPD--PTTKAVAVPIYQTTSYAFDDTQHGADLFDLKVPGNIYTRIMNPTNDVLEQRVAALEGGVGALAV 79 (425)
T ss_pred CcchhheeCCcCCC--CCCCCccCCEeCCCCcccCCHHHHHHhhccccCCccccCCCCchHHHHHHHHHHHhCCCceeEe
Confidence 36799999996532 2358999999999999999998887766655567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|||+|+.+++.+++++||+|+++.+.|++++..+...++..|+++.+++..|+++|+++++++ +++|++|+|+||+|.
T Consensus 80 ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le~ai~~~-tklV~lesp~NPtG~ 158 (425)
T PRK06084 80 ASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALEALIDER-TKAVFCESIGNPAGN 158 (425)
T ss_pred hhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHHHHhccC-CcEEEEeCCCCCCCe
Confidence 9999999999999999999999999999999888877777789999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHH---------------
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL--------------- 376 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~el--------------- 376 (451)
+.|+++|.++|+++|++||+|++++.+..++++++|+|++++|+||+++||++++||+++.+..+
T Consensus 159 v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~ 238 (425)
T PRK06084 159 IIDIQALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTP 238 (425)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999874321
Q ss_pred ------------------HHH-HHHHhHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCC
Q 013019 377 ------------------VTQ-IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITL 437 (451)
Q Consensus 377 ------------------i~~-lr~~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPg 437 (451)
..+ ....+..+|..++|++||+++++|+++..|++++++|+++++++|++||+|++|+||+
T Consensus 239 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~ 318 (425)
T PRK06084 239 DPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAG 318 (425)
T ss_pred CcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 001 1122446789999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcc
Q 013019 438 LLCFYNGTL 446 (451)
Q Consensus 438 L~~~p~~~l 446 (451)
|++||++.+
T Consensus 319 l~~~p~~~~ 327 (425)
T PRK06084 319 LPDHPEHEL 327 (425)
T ss_pred CCCcccHHH
Confidence 999999876
No 20
>PRK05939 hypothetical protein; Provisional
Probab=100.00 E-value=7.6e-51 Score=421.78 Aligned_cols=277 Identities=32% Similarity=0.554 Sum_probs=251.0
Q ss_pred CCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccC
Q 013019 169 VTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA 248 (451)
Q Consensus 169 ~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~ 248 (451)
.+++++||||+|+||.|++.+++.+.+.++..+|.|+|++||+.+.||++|++++|++.+++++|||+|+..++.+++++
T Consensus 6 ~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~~ 85 (397)
T PRK05939 6 EHGAVHKPIHTSVTYGYEDARDLIDVFQGKKPGFTYARQGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLRA 85 (397)
T ss_pred CCCCccCCccCCCCeecCCHHHHHHhhcCCcCCCCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcCC
Confidence 46889999999999999999888877766556799999999999999999999999999999999999999999999999
Q ss_pred CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCE
Q 013019 249 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAI 328 (451)
Q Consensus 249 GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~ 328 (451)
||+|+++++.|+++..++.. +...|+++.+++..|+++|+++++++ |++|++|+|+||+|.+.|+++|+++||++|++
T Consensus 86 Gd~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~v~~~d~e~l~~~l~~~-tklV~vesp~NptG~v~dl~~I~~la~~~gi~ 163 (397)
T PRK05939 86 GDHLVSSQFLFGNTNSLFGT-LRGLGVEVTMVDATDVQNVAAAIRPN-TRMVFVETIANPGTQVADLAGIGALCRERGLL 163 (397)
T ss_pred CCEEEECCCccccHHHHHHH-HHhcCCEEEEECCCCHHHHHHhCCCC-CeEEEEECCCCCCCCHHhHHHHHHHHHHcCCE
Confidence 99999999999998877744 67789999999998999999999874 99999999999999999999999999999999
Q ss_pred EEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHH--------H-------------HHHHH-HHhHh
Q 013019 329 VCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--------L-------------VTQIR-NLHHV 386 (451)
Q Consensus 329 lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~e--------l-------------i~~lr-~~~~~ 386 (451)
+|+|++++++..++++.+|+|++++|+||+++||+++++|+++.+.. + +.+++ .....
T Consensus 164 livD~t~a~~~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (397)
T PRK05939 164 YVVDNTMTSPWLFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRD 243 (397)
T ss_pred EEEECCcccccccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHh
Confidence 99999999988888999999999999999999999999998875321 1 12222 23346
Q ss_pred hCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 387 LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 387 ~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
+|..++|+++|+++|||+||..|++++.+|+.+|++||++||+|++|+||+|++||++++.
T Consensus 244 ~G~~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~ 304 (397)
T PRK05939 244 MGATLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARA 304 (397)
T ss_pred cCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHH
Confidence 7999999999999999999999999999999999999999999999999999999998764
No 21
>PRK07503 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.1e-50 Score=421.54 Aligned_cols=291 Identities=35% Similarity=0.545 Sum_probs=269.3
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 013019 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (451)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~s 232 (451)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|+++|+.+.||++|++++|++.+++++
T Consensus 10 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~~ 87 (403)
T PRK07503 10 FSTRAIHHGYDPL--DHGGALVPPVYLTATFAFPTAEYGAECFAGEEEGHFYSRISNPTLALLEQRMASLEGGEAAVALA 87 (403)
T ss_pred ccchheeCCCCCC--CCCCCccCCcccCcceecCChHHHHHhhccccCCceeeCCCCchHHHHHHHHHHHhCCCcEEEEc
Confidence 6799999996532 34689999999999999999998888776666679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccc
Q 013019 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (451)
Q Consensus 233 SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v 312 (451)
|||+|+.+++.+++++||+||++.+.|+.++.++...+...|++++++|..|++++++++++ +|++|++|+|+||+|.+
T Consensus 88 sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~-~tklV~le~p~NPtG~~ 166 (403)
T PRK07503 88 SGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAALKAAISD-KTRMVYFETPANPNMRL 166 (403)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHHHHhcCc-cCcEEEEeCCCCCCCee
Confidence 99999999999999999999999999999888887778889999999999899999999987 49999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH--hHhhCCC
Q 013019 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLGGA 390 (451)
Q Consensus 313 ~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~--~~~~G~~ 390 (451)
.|+++|.++|+++|+++|+|++|+.++.++++.+|+|++++|+||+++||+|+++|+++++++++++++.. +...|..
T Consensus 167 ~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~ 246 (403)
T PRK07503 167 VDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAV 246 (403)
T ss_pred eCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCC
Confidence 99999999999999999999999998888888899999999999999999999999999999999988743 5567889
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTL 446 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~l 446 (451)
++++++|+++++|+++..|++++.+|++.++++|++||.|++|+||++++||++++
T Consensus 247 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~ 302 (403)
T PRK07503 247 MSPFDAFLLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHAL 302 (403)
T ss_pred CCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHH
Confidence 99999999999999999999999999999999999999999999999999999765
No 22
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2e-50 Score=422.67 Aligned_cols=293 Identities=31% Similarity=0.534 Sum_probs=262.9
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|++||+.++||+++|+++|++.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~y~R~~~p~~~~le~~lA~l~g~~~av~~ 85 (433)
T PRK08134 8 GFDTLALHAGAAPD--PATGARAVPIHLTTSFVFRDSDHAAALFNLERAGHVYSRISNPTVAVLEERVAALEGGVGAIAT 85 (433)
T ss_pred CcchhheeCCCCCC--CCCCCccCCccCCCccccCCHHHHHHhhcccccCceeecCcChHHHHHHHHHHHHhCCCcEEEe
Confidence 36799999996532 3468999999999999999998887766655567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|||+|+.+++.+++++||+||+++..|+++..++...+.++|++++++|..|+++|+++|+++ |++|++++|+||+|.
T Consensus 86 sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l~~~i~~~-TklV~~e~~~np~g~ 164 (433)
T PRK08134 86 ASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGWRAAIRPN-TRLLFGETLGNPGLE 164 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHHHHhcCCC-CeEEEEECCCcccCc
Confidence 9999999999999999999999999999999888877778899999999988999999999885 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHH----------------
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 375 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~e---------------- 375 (451)
+.|+++|+++||++|+++|+|+|+++++.+.|+++|+|++++|.|||++||+|++||+++....
T Consensus 165 v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~ 244 (433)
T PRK08134 165 VLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPY 244 (433)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCc
Confidence 9999999999999999999999999999999999999999999999999999999998874211
Q ss_pred ----------------HHHHH-HHHhHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCC
Q 013019 376 ----------------LVTQI-RNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLL 438 (451)
Q Consensus 376 ----------------li~~l-r~~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL 438 (451)
+..+. ......+|..+++++||+++++|++++.|++++++||.+++++|++||.|++|+||+|
T Consensus 245 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l 324 (433)
T PRK08134 245 AGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPEL 324 (433)
T ss_pred ccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 01111 1233467889999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccc
Q 013019 439 LCFYNGTLV 447 (451)
Q Consensus 439 ~~~p~~~lv 447 (451)
++||++++.
T Consensus 325 ~~~p~~~~~ 333 (433)
T PRK08134 325 ESHPDHALA 333 (433)
T ss_pred CCCccHHHH
Confidence 999988765
No 23
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=100.00 E-value=3.5e-50 Score=414.99 Aligned_cols=285 Identities=30% Similarity=0.507 Sum_probs=260.8
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|...+ ..+++++|||+++++|.|++.. +..+|.|+||+||+...||++|++++|.++++++
T Consensus 3 ~~~t~~~~~~~~~~--~~~~~~~~pi~~ss~~~~~~~~--------~~~~~~Y~R~~~p~~~~le~~lA~l~g~~~v~~~ 72 (382)
T TIGR02080 3 KQATIAVRSGLNSD--TQYGCVVPPIYLSTTYNFTGFN--------EPRAYDYSRSGNPTRDLLQQALAELEGGAGAVVT 72 (382)
T ss_pred CcccceeecCCCCC--CCCCCccCCeeCCceeEeCCcC--------ccCCCcccCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 47899999996532 2368999999999999987532 1236889999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
++|++||.+++.+++++||+|+++++.|++++..+.......++++.+++..|+++++++++++ +++|++|+|+||||.
T Consensus 73 ~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~~-tklV~l~~p~NPtG~ 151 (382)
T TIGR02080 73 NTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQK-PKLVLIETPSNPLLR 151 (382)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCCE
Confidence 9999999999999999999999999999998888877667778899988888899999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ 390 (451)
+.|+++|.++|+++|+++|+|++|+.+..+.++.+|+|++++|+|||++|++++++|++++ +++++++++.++..+|..
T Consensus 152 ~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~ 231 (382)
T TIGR02080 152 VVDIAKICHLAKAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVT 231 (382)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999988888888999999999999999999999999876 578889999888888999
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
++++++|+++++++++..|++++.+|+..+++||++||.|++|+||+|++||++++.
T Consensus 232 ~sp~~a~l~lr~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~ 288 (382)
T TIGR02080 232 GGAFDSYLTLRGLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIA 288 (382)
T ss_pred CCHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHH
Confidence 999999999999999999999999999999999999999999999999999998864
No 24
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=100.00 E-value=6e-50 Score=412.97 Aligned_cols=285 Identities=35% Similarity=0.594 Sum_probs=260.8
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|...+ ..+++++||||+|+||.|++.+ +..+|.|+|++||+...||+++++++|.+.++++
T Consensus 2 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~p~~~~Le~~la~l~g~~~al~~ 71 (380)
T PRK06176 2 RMQTKLIHGGISED--TTTGAVSVPIYQTSTYRQDAIG--------RPKGYEYSRSGNPTRFALEELIADLEGGVKGFAF 71 (380)
T ss_pred CccceeeECCCCCC--CCCCCccCCcccCCceecCCCC--------CcCCCcccCCCChhHHHHHHHHHHHhCCCCEEEE
Confidence 46789999996532 3368999999999999988732 2347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|||+|+.+++ .++++||+|+++++.|++++..+...+...|++++++|..|+++++++++++ +++|++|+|+||+|.
T Consensus 72 ~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~~ai~~~-t~lV~lesP~Nptg~ 149 (380)
T PRK06176 72 ASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIKKAIKPN-TKALYLETPSNPLLK 149 (380)
T ss_pred CCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHHHhcCcC-ceEEEEECCCCCCce
Confidence 99999998655 6789999999999999999988888888899999999999999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G~~ 390 (451)
+.|+++|.++||++|+++|+|++|+.++.++|+.+|+|++++|+||+++||+|+++|+++++ +++.++++..+...|..
T Consensus 150 ~~di~~I~~la~~~gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~ 229 (380)
T PRK06176 150 ITDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGV 229 (380)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCccccccCCccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999888889999999999999999999999999998885 57778888888888989
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLVG 448 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv~ 448 (451)
++++++|+++++++++..|++++++|+.++++||++||.|.+|+||+|++||++.+..
T Consensus 230 ~~~~~~~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~ 287 (380)
T PRK06176 230 LGPQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAK 287 (380)
T ss_pred CCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHH
Confidence 9999999999999999999999999999999999999999999999999999987653
No 25
>PRK07049 methionine gamma-lyase; Validated
Probab=100.00 E-value=8.8e-50 Score=417.44 Aligned_cols=293 Identities=31% Similarity=0.507 Sum_probs=263.6
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhc----------ccCCccccCCCchhHHHHHHHHHhh
Q 013019 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEK----------RRASFEYGRYGNPTTVVVEEKMSAL 222 (451)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~----------~~~~~~Y~R~~npt~~~Lee~LA~l 222 (451)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.. ...+|.|+||+||+...||++||++
T Consensus 18 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~R~~~Pt~~~Le~~lA~l 95 (427)
T PRK07049 18 PETQMLNYGYDPE--LSEGAVKPPVFLTSTFVFRSAEDGRDFFDYVSGRKEPPAGEGAGLVYSRFNHPNSEIVEDRLAVY 95 (427)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCccceecCChHHHHhhhhccccccccccccccCccccCCCCcCHHHHHHHHHHH
Confidence 6799999996422 236899999999999999999887764421 2345899999999999999999999
Q ss_pred hCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE-EEEeCCCCHHHHHHhhc----CCCe
Q 013019 223 EGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT-ATVIDPADMEGLEAALN----NNNV 297 (451)
Q Consensus 223 ~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~-v~~vd~~D~d~Le~ai~----~~~t 297 (451)
+|.+++++++|||+||.+++.+++++||+|+++++.|+++..++...++.+|++ +.+.+..|+++++++++ +.++
T Consensus 96 eg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~t 175 (427)
T PRK07049 96 EGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRV 175 (427)
T ss_pred hCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCc
Confidence 999999999999999999999999999999999999999988877777888997 55666677888887764 2359
Q ss_pred EEEEEeCCCCCccccccHHHHHHHHHh------cCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEE
Q 013019 298 SLFFTESPTNPFLRCVDVKLVSDLCHK------KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS 371 (451)
Q Consensus 298 klV~lesPsNPtG~v~DL~~IaelA~~------~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv 371 (451)
++||+|+|+||||.+.|+++|.+++++ +++++|+||+|.+++.++|+.+|+|++++|+||+++||+++++|+++
T Consensus 176 klv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~g~divv~S~SK~~gG~~glr~G~vv 255 (427)
T PRK07049 176 SLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEHGADLSVYSLTKYVGGHSDLVAGAVL 255 (427)
T ss_pred eEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccccCCCEEEEcCceeecCCCCcEEEEEE
Confidence 999999999999999999999999988 89999999999998888899999999999999999999999999999
Q ss_pred eCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCC--CCCCCCccc
Q 013019 372 GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLL--LCFYNGTLV 447 (451)
Q Consensus 372 ~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL--~~~p~~~lv 447 (451)
++++++++++..+..+|..++++++|+++++|+++..|++++.+|++.++++|++||+|++|+||++ ++||++++.
T Consensus 256 ~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~ 333 (427)
T PRK07049 256 GRKALIRQVRALRSAIGTQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVY 333 (427)
T ss_pred CCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHH
Confidence 9999999999988889999999999999999999999999999999999999999999999999986 999998865
No 26
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=100.00 E-value=1.5e-49 Score=411.24 Aligned_cols=292 Identities=34% Similarity=0.571 Sum_probs=269.9
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|... ..++++.+|||+++||.+++.++....+.++..+|.|+|+++|+.++||++|++++|+++++++
T Consensus 6 ~~~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~v~~ 82 (390)
T PRK08133 6 GFDTLAVRAGQLR---SPFGEHSEALFLTSSFVFESAAEAAARFAGEEPGNIYSRFTNPTVTMFQERLAALEGAEACVAT 82 (390)
T ss_pred CcchhheeCCCCC---CCCCCccCCccCCCCcccCCHHHHHHhhcCCcCCceeECCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 3679999999642 2367899999999999999988776655545556889999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|||+|+..++.+++++||+||++++.|++++..+...+..+|+++.+++..|+++++++++++ |++|++|+|+||+|.
T Consensus 83 ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~-tklV~ie~p~NptG~ 161 (390)
T PRK08133 83 ASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAVRPN-TKLFFLETPSNPLTE 161 (390)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCCC
Confidence 9999999999999999999999999999999988877788899999999998999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCc
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 391 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~l 391 (451)
+.|+++|.++|+++|+++|+|++|+.+..+.|+.+|+|++++|+||+++|+++++||++++++++++++.......|..+
T Consensus 162 v~dl~~I~~la~~~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~ 241 (390)
T PRK08133 162 LADIAALAEIAHAAGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTL 241 (390)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999988889999999999999999999999999999999998888887778889999
Q ss_pred cHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 392 s~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
+++++|+++++++++..|++++.+|+..+++||++||+|++|+||+|++||++++.
T Consensus 242 ~~~~a~~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~ 297 (390)
T PRK08133 242 SPFNAWVFLKGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELA 297 (390)
T ss_pred CHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHH
Confidence 99999999999999999999999999999999999999999999999999998764
No 27
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=8.4e-50 Score=412.56 Aligned_cols=288 Identities=32% Similarity=0.498 Sum_probs=257.9
Q ss_pred CCccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 013019 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (451)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv 230 (451)
|+.+|+++|.|... ..+++++||||+|+||.+++.+. +.++..+|.|+|++||+.++||+++|+++|.+++++
T Consensus 1 ~~~~t~~~~~~~~~---~~~~~~~~pi~~~st~~~~~~~~----~~~~~~~~~y~r~~np~~~~lE~~lA~l~g~~~~l~ 73 (385)
T PRK08574 1 MRRGTDAVRGYRGS---DPYGSLQPPIYLTALFRQEGEAY----PSDRGFDLKYSREENPTLRPLEEALAKLEGGVDALA 73 (385)
T ss_pred CCccceeeecCCCC---CCCCCccCCccCCcceecCcchh----hcCCcCCceEECCCCccHHHHHHHHHHHhCCCcEEE
Confidence 35678999987442 24689999999999999876532 223335689999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcc
Q 013019 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (451)
Q Consensus 231 ~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG 310 (451)
++||++|+..++.+++++||+|+++.+.|+++...++.. ...|+++.+++. |++++++++++.++++|++|+|+||+|
T Consensus 74 ~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~~~-d~~~l~~~i~~~~tklV~ie~p~NPtG 151 (385)
T PRK08574 74 FNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLAYP-STEDIIEAIKEGRTKLVFIETMTNPTL 151 (385)
T ss_pred eCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHh-hccCcEEEEECC-CHHHHHHhcCccCceEEEEECCCCCCC
Confidence 999999999999999999999999999999988777653 678999888765 689999999863499999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEE-eCHHHHHHHHHHhHhhCC
Q 013019 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGG 389 (451)
Q Consensus 311 ~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv-~~~eli~~lr~~~~~~G~ 389 (451)
.+.|+++|+++|+++|+++|+|++|+.++.++++++|+|++++|+||+++||+|++||+++ .+++++++++.++..+|.
T Consensus 152 ~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~ 231 (385)
T PRK08574 152 KVIDVPEVAKAAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGT 231 (385)
T ss_pred EecCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999888899999999999999999999999999555 467888999888888899
Q ss_pred CccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
.++++++|+++++|+++..|++++.+|++++++||++||.|++|+||+|++||++++.
T Consensus 232 ~~~p~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~ 289 (385)
T PRK08574 232 IMQPFEAYLVLRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVA 289 (385)
T ss_pred CCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHH
Confidence 9999999999999999999999999999999999999999999999999999997764
No 28
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=100.00 E-value=2.4e-49 Score=408.49 Aligned_cols=290 Identities=37% Similarity=0.592 Sum_probs=268.0
Q ss_pred cccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCC
Q 013019 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 233 (451)
Q Consensus 154 ~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sS 233 (451)
.|+++|.|... ..++++.+|||+++||.|++.++..+.+.++..+|.|+||++|+..+||++|++++|.+.+++++|
T Consensus 1 ~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~~~~~s 77 (380)
T TIGR01325 1 ATLAIRGGKER---TEFREHAEALFLTSSFVYDSAAHAADRFAGEIPGFVYSRYANPTVAAFEERIAALEGAERAVATAT 77 (380)
T ss_pred CceeEECCCCC---CCCCCccCCeeCCcceecCCHHHHHHhhccccCCcceecCCCchHHHHHHHHHHHhCCCcEEEECC
Confidence 37789998632 236789999999999999998877665555556799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccc
Q 013019 234 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 313 (451)
Q Consensus 234 G~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~ 313 (451)
||+|+.+++.+++++||+|+++++.|++++..+...+..+|+++.++|..|+++++++++++ +++|++|+|+||+|.+.
T Consensus 78 G~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~-tklV~le~p~np~g~~~ 156 (380)
T TIGR01325 78 GMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAVKPN-TKLVFVETPSNPLGELV 156 (380)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCCeee
Confidence 99999999999999999999999999999888877888899999999988999999999874 99999999999999999
Q ss_pred cHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccH
Q 013019 314 DVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP 393 (451)
Q Consensus 314 DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~ 393 (451)
|+++|.++|+++|+++|+|++|+.++.++++++|+|++++|+||+++|+++++||+++++++++++++......|..+++
T Consensus 157 dl~~I~~la~~~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p 236 (380)
T TIGR01325 157 DIAALAELAHAIGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSP 236 (380)
T ss_pred CHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCH
Confidence 99999999999999999999999888888999999999999999999999999999999999999998887788999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 394 NAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 394 ~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
+++|+++++++++..|++++.+|+++++++|++||+|++|+||++++||++++.
T Consensus 237 ~~a~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~ 290 (380)
T TIGR01325 237 FNAWVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELA 290 (380)
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHH
Confidence 999999999999999999999999999999999999999999999999998764
No 29
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=100.00 E-value=2.4e-49 Score=410.78 Aligned_cols=292 Identities=33% Similarity=0.530 Sum_probs=266.2
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|... ..++++.+|||++++|.|++.++..+.+.++..+|.|+||++|+...||++||+++|.+.++++
T Consensus 10 ~~~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~~~~~ 86 (398)
T PRK07504 10 RPATRLVHSGTLR---SQFGETSEALFLTQGFVYDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAEDARAT 86 (398)
T ss_pred CcccceeeCCCCC---CCCCCCcCCeECCCCccCCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCeeeEe
Confidence 4679999999632 2367899999999999999988776655555567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+||++|+..++.+++++||+|+++++.|+++...+...++.+|+++++++..|+++++++++++ |++|++|+|+||+|.
T Consensus 87 ~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~ai~~~-tklV~lesp~NptG~ 165 (398)
T PRK07504 87 ASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNWEKAVRPN-TKVFFLESPTNPTLE 165 (398)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCcE
Confidence 9999999988888999999999999999998877777778889999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHH-HHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~-~lr~~~~~~G~~ 390 (451)
+.|+++|.++|+++|+++|+|++|+.++.+.++++|+|++++|+||+++|||+.+||+++++++++. +++......|..
T Consensus 166 v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~ 245 (398)
T PRK07504 166 VIDIAAVAKIANQAGAKLVVDNVFATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPS 245 (398)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCccccccCCchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999888888899999999999999999999999999999887765 466666778999
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
++++.+|+++++|+++..|++++.+|+++++++|++||+|.+|+||||++||++++.
T Consensus 246 ~s~~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~ 302 (398)
T PRK07504 246 LSPFNAWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADII 302 (398)
T ss_pred CCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHH
Confidence 999999999999999999999999999999999999999999999999999997664
No 30
>PRK06234 methionine gamma-lyase; Provisional
Probab=100.00 E-value=3.6e-49 Score=409.76 Aligned_cols=293 Identities=34% Similarity=0.590 Sum_probs=267.7
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
.++|+++|.|...+ ..++++++|+|++++|.+++.+++.+.+..+..+|.|+||++|+...||++|++++|.++++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~iA~~~g~~~~l~~ 85 (400)
T PRK06234 8 GFATKAIHGGHIGD--KQFGSLATPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRLGNPTSTEVENKLALLEGGEAAVVA 85 (400)
T ss_pred CccchheECCCCCC--CCCCCccCCcccccceecCChHHHHHhhccCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEE
Confidence 36799999996532 3468999999999999999988766655444457889999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+||++|+..++.+++++||+|+++++.|+.++..+...++..|+++.++|..|+++++++++++ +++|++|+|+||+|.
T Consensus 86 ~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~~i~~~-tklI~iesP~NPtG~ 164 (400)
T PRK06234 86 ASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVRNALKAN-TKVVYLETPANPTLK 164 (400)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHHHHHhccC-CeEEEEECCCCCCCC
Confidence 9999999999999999999999999999999888877788899999999999999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhc--CCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH--hHhh
Q 013019 312 CVDVKLVSDLCHKK--GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVL 387 (451)
Q Consensus 312 v~DL~~IaelA~~~--g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~--~~~~ 387 (451)
+.|+++|.++|+++ |+++|+|++|+.++...++.+|+|++++|+||+++|++++++|+++++++++++++.. +..+
T Consensus 165 v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~ 244 (400)
T PRK06234 165 VTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMT 244 (400)
T ss_pred cCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhc
Confidence 99999999999997 9999999999999888888889999999999999999999999999999998888753 4467
Q ss_pred CCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 388 GGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 388 G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
|..++++++|+++++|++++.|++++.+|+++++++|++||.|.+|+||+|++||++++.
T Consensus 245 g~~l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~ 304 (400)
T PRK06234 245 GSVIGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELA 304 (400)
T ss_pred CCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHH
Confidence 889999999999999999999999999999999999999999999999999999998763
No 31
>PRK07671 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=4.1e-49 Score=406.37 Aligned_cols=284 Identities=35% Similarity=0.606 Sum_probs=259.3
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|+|...+ ..+++++||||+++||.+++.+ +..+|.|+|++||+...||++|++++|.+.++++
T Consensus 2 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~p~~~~Le~~lA~l~g~~~~~~~ 71 (377)
T PRK07671 2 RAKTKLIHGGIIGD--PSTGAVSVPIYQVSTYKQEAVG--------KHQGYEYSRTGNPTRAALEELIAVLEGGHAGFAF 71 (377)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCCCC--------CcCCCCcCCCCChHHHHHHHHHHHHhCCCceEEe
Confidence 46899999996532 3368999999999999888642 2346899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|||+|+..++ .++++||+|+++++.|++++..+...+..+|+++.+++..|+++++++++++ |++|++|+|+||+|.
T Consensus 72 ~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~-tklV~le~P~NPtg~ 149 (377)
T PRK07671 72 GSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEVEEAIRPN-TKAIYVETPTNPLLK 149 (377)
T ss_pred CCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCCc
Confidence 99999887765 6889999999999999998888777778899999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ 390 (451)
+.|+++|.++|+++|+++|+|++|+.++.++++.+|+|++++|+||+++||+|+++|+++. +++++++++..+...|..
T Consensus 150 ~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~ 229 (377)
T PRK07671 150 ITDIKKISTIAKEKGLLTIVDNTFMTPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGI 229 (377)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999888888899999999999999999999989998776 467889999988888999
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
++++++|+++++++++..|++++++|++.|++||++||+|.+|+||+|++||++.+.
T Consensus 230 ~~~~~a~l~~~~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~ 286 (377)
T PRK07671 230 LGPQDSWLLLRGLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELA 286 (377)
T ss_pred CCHHHHHHHHcCcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHH
Confidence 999999999999999999999999999999999999999999999999999998764
No 32
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=3.5e-49 Score=405.06 Aligned_cols=280 Identities=32% Similarity=0.521 Sum_probs=249.4
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
.++|+++|.|...+ ..+++++||||+|+||.|++. ++..+|.|+|++||+..+||++|++++|+++++++
T Consensus 6 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~--------~~~~~~~Y~R~~~p~~~~le~~lA~leg~~~~v~~ 75 (364)
T PRK07269 6 HINTILAQAGIKSD--EATGALVTPLHFSTTYQHPEF--------GQSTGFDYTRTKNPTRAKLEETLAAIESADYALAT 75 (364)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCCC--------CCcCCcceeCCCCccHHHHHHHHHHHhCCCeEEEe
Confidence 36799999996532 236899999999999998863 22347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|||+|+.+++ .++++||+||++.+.|+++..++.......++++++. .|+++++++++++ ||+|++|+|+||+|.
T Consensus 76 ~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~--~d~~~l~~~i~~~-TklV~lesP~NPtg~ 151 (364)
T PRK07269 76 SSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYA--NTEEELIAAIEED-TDIVYIETPTNPLMV 151 (364)
T ss_pred CCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEec--CCHHHHHHhcCcC-ceEEEEECCCCCCCe
Confidence 99999999888 4679999999999999999887766655556665553 5799999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G~~ 390 (451)
+.|+++|+++|+++|+++|+|+||++++.++|+.+|+|++++|+||+++||+|+++|+|+++ +++.++++..+...|..
T Consensus 152 ~~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~ 231 (364)
T PRK07269 152 EFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAV 231 (364)
T ss_pred eeCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999988999999999999999999999999999998874 67888888877788999
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcccccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLVGFM 450 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv~f~ 450 (451)
++++++|+++++|++|..|++++++|++++++||++||.|.+|+||++ .++++|.
T Consensus 232 ~s~~~a~l~~~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~-----gg~~sf~ 286 (364)
T PRK07269 232 LSPFDSYLLMRGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGK-----GGMISFK 286 (364)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCc-----CcEEEEE
Confidence 999999999999999999999999999999999999999999999986 4555553
No 33
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=6e-49 Score=411.23 Aligned_cols=293 Identities=30% Similarity=0.436 Sum_probs=261.9
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 013019 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (451)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~s 232 (451)
++|+++|.|...+ ..+++++||||+++||.|++.+++.+.+..+..++.|+|.++|+...||++|++++|.+.+++++
T Consensus 8 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~al~~~ 85 (427)
T PRK05994 8 FATLAVHAGAQPD--PTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRITNPTNAVLEERVAALEGGTAALAVA 85 (427)
T ss_pred cchhheECCcCCC--CCCCCccCCCcCCCCcccCCHHHHHHhhccccCCcceECCCCccHHHHHHHHHHHhCCCcEEEEc
Confidence 6799999996532 23578999999999999999887776655444568999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccc
Q 013019 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (451)
Q Consensus 233 SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v 312 (451)
|||+|+.+++.+++++||+||++.+.|+++...+...+...|+++.++|..|+++++++++++ +++|++|+|+||+|.+
T Consensus 86 SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~-tklV~vesp~NptG~v 164 (427)
T PRK05994 86 SGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFERAITPR-TKAIFIESIANPGGTV 164 (427)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCCee
Confidence 999999999999999999999999999999888877778899999999998999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCH------------------
Q 013019 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG------------------ 374 (451)
Q Consensus 313 ~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~------------------ 374 (451)
.|+++|.++|+++|+++|+|+++++++.++++++|+|++++|+||+++||+|.+||+++...
T Consensus 165 ~dl~~I~~la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~ 244 (427)
T PRK05994 165 TDIAAIAEVAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRP 244 (427)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999988522
Q ss_pred H-----HHHH----------HHHHhHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCC
Q 013019 375 K-----LVTQ----------IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLL 439 (451)
Q Consensus 375 e-----li~~----------lr~~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~ 439 (451)
+ +.+. ........|..+++++||+++++|++|+.|++++++|++.++++|++||+|++|+||+|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~ 324 (427)
T PRK05994 245 EYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLP 324 (427)
T ss_pred hhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCC
Confidence 1 1111 112344678999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccc
Q 013019 440 CFYNGTLVG 448 (451)
Q Consensus 440 ~~p~~~lv~ 448 (451)
+||++++..
T Consensus 325 ~~~~~~~~~ 333 (427)
T PRK05994 325 DDPYHALAQ 333 (427)
T ss_pred CCccHHHHH
Confidence 999987753
No 34
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.3e-48 Score=406.11 Aligned_cols=286 Identities=33% Similarity=0.522 Sum_probs=261.1
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|...+ ..+++++||||++++|.|++.. ...+|.|+|+++|+.+.||++|++++|+++++++
T Consensus 12 ~~~t~~~~~~~~~~--~~~~~~~~pi~~ss~~~~~~~~--------~~~~~~y~R~~~p~~~~Le~~lA~l~g~~~~v~~ 81 (405)
T PRK08776 12 SAATAAVRAGIDRD--TAYGAVTPPIVLSSNFSFDGFG--------NKRQYDYTRSGNPTRDLLGEALAELEGGAGGVIT 81 (405)
T ss_pred CccchheeCCCCCC--CCCCCccCCEeccceEEeCCCC--------cccCCcccCCCChHHHHHHHHHHHHhCCCceEEE
Confidence 37799999996542 3468999999999999988732 1236899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|||+|+.+++.+++++||+|+++.+.|++++.++...+...|+++..++..|+++|++++++ ++++|++|+|+||+|.
T Consensus 82 ~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~-~tklV~l~~P~NPtG~ 160 (405)
T PRK08776 82 ATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSLADALAQ-SPKLVLIETPSNPLLR 160 (405)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999999988887777788999999998899999999987 4999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ 390 (451)
+.|+++|.++|+++|+++|+|++|+.+..++|+++|+|++++|+||+++||+++++|++++ ++++.++++..+...|..
T Consensus 161 v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~ 240 (405)
T PRK08776 161 ITDLRFVIEAAHKVGALTVVDNTFLSPALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLT 240 (405)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCCcccccCCcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999988888999999999999999999999999998877 567888888877788888
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLVG 448 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv~ 448 (451)
++++++|+++++++++..|++++.+|+..++++|++||.|++|+||+|++||++++..
T Consensus 241 ~s~~~a~l~~~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~ 298 (405)
T PRK08776 241 GSPFDAFLTLRGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAA 298 (405)
T ss_pred CCHHHHHHHHhhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988653
No 35
>PLN02509 cystathionine beta-lyase
Probab=100.00 E-value=1.2e-48 Score=411.33 Aligned_cols=283 Identities=31% Similarity=0.556 Sum_probs=255.6
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|...+ .+++++||||+++||.+++.. +...|.|+|++||++++||+++++++|.+.++++
T Consensus 86 ~~~t~~~~~~~~~~---~~~~~~~Pi~~sst~~~~~~~--------~~~~~~Y~r~gnpt~~aLE~~lA~leg~e~ai~~ 154 (464)
T PLN02509 86 SVSTLLVNLDNKFD---PFDAMSTPLYQTATFKQPSAI--------ENGPYDYTRSGNPTRDALESLLAKLDKADRAFCF 154 (464)
T ss_pred CcchHheeCCCCCC---CCCCccCCccccceecCcccc--------ccCCCccCCCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 37899999996532 357999999999999887631 2246899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+||++|+.+++ .++++||+||++++.|+++..++...+...|+++.+++..|+++++++++++ +++|++|+|+||+|.
T Consensus 155 ~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~~ai~~~-TklV~lesPsNPtG~ 232 (464)
T PLN02509 155 TSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVAAAIGPQ-TKLVWLESPTNPRQQ 232 (464)
T ss_pred CcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHHHhCCcC-CeEEEEECCCCCCCC
Confidence 99999986655 6789999999999999999888877778889999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCH-HHHHHHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~~G~~ 390 (451)
+.|+++|+++|+++|+++|+|++++.++.++++.+|+|++++|+|||++||+|+++|++++++ ++.++++..+...|..
T Consensus 233 i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~ 312 (464)
T PLN02509 233 ISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSG 312 (464)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999888999999999999999999999999999998754 4566677777777888
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
++++++|+++++|+++..|++++++|+++++++|++||.|++|+||||++||++.+.
T Consensus 313 l~p~~A~l~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~ 369 (464)
T PLN02509 313 LAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLH 369 (464)
T ss_pred cCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHH
Confidence 999999999999999999999999999999999999999999999999999998763
No 36
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=100.00 E-value=1.1e-48 Score=401.73 Aligned_cols=276 Identities=45% Similarity=0.749 Sum_probs=259.8
Q ss_pred CCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCC
Q 013019 171 DAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG 250 (451)
Q Consensus 171 ~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD 250 (451)
++++||||+|+||.|++.+++.+.+.++..++.|+|+++|+.++||++|++++|.+++++++||++|+..++.+++++||
T Consensus 1 ~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd 80 (369)
T cd00614 1 GAVAPPIYQTSTFVFPSPAEAADLFALREGGYIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGD 80 (369)
T ss_pred CCcCCCccCCCceecCCHHHHHHhhcCCcCCceeECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCC
Confidence 36889999999999999998887776666779999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEE
Q 013019 251 HIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (451)
Q Consensus 251 ~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lV 330 (451)
+|+++.+.|++++..+...++..|+++.+++..|++++++++++ ++++|++|+|+||+|.+.|+++|+++|+++|+++|
T Consensus 81 ~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~li 159 (369)
T cd00614 81 HVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLV 159 (369)
T ss_pred EEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEE
Confidence 99999999999998887777888999999999899999999987 49999999999999999999999999999999999
Q ss_pred EecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCH-HHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHHH
Q 013019 331 IDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLR 409 (451)
Q Consensus 331 VD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~R 409 (451)
+|++|+.++.++++++|+|++++|+||+++||+++++|++++++ +++++++..+..+|..++++.+|+++++++++..|
T Consensus 160 vD~t~~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~r 239 (369)
T cd00614 160 VDNTFATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTLPLR 239 (369)
T ss_pred EECCCcchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCHHHH
Confidence 99999999888899999999999999999999999999999987 89999998888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 410 VQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 410 l~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
++++.+|+++++++|+++|+|.+|+||+|++||++++.
T Consensus 240 ~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~ 277 (369)
T cd00614 240 MERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELA 277 (369)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHH
Confidence 99999999999999999999999999999999987654
No 37
>PRK06434 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=1.1e-48 Score=403.38 Aligned_cols=282 Identities=35% Similarity=0.582 Sum_probs=253.2
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|.++|.|...+ ..++++++|||+++||.|++.++.....+....+|.|+|++||+.++||+++++++|++.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pI~~ss~~~~~~~~~~~~~~~~~~~~~~Y~r~~~P~~~~lE~~la~leg~~~av~~ 85 (384)
T PRK06434 8 GFNTRAVQSGELRD--PRFGNVTTPIFETSTFVYPNSEKEAYMDSTRGMPYIYTRWGNPTVQAFEEKYAVLENAEHALSF 85 (384)
T ss_pred CcccceeECCCCCC--CCCCCccCCeeCCcceecCChHHhhhccccccCCcceeCCCChhHHHHHHHHHHHhCCCcEEEe
Confidence 47899999996532 3468999999999999999987654322222346999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|||+||.+++.+++++||+||++...|++++.++...+..+|+++.++|..+.+.++ ++++++++|++|+|+||++.
T Consensus 86 sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~snpt~~ 163 (384)
T PRK06434 86 SSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD--FDPSNYDLIYAESITNPTLK 163 (384)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee--ecCCCeeEEEEEcCCCCCce
Confidence 9999999999999999999999999999999999888888999999999987656655 55545999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G~~ 390 (451)
+.|+++|+++||++| +++|+|+++++.++|+.+|+|++++|.||+++||+|++||+++++ +++.++++..+..+|..
T Consensus 164 v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~ 241 (384)
T PRK06434 164 VPDIKNVSSFCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSN 241 (384)
T ss_pred eecHHHHHHHHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCC
Confidence 999999999999998 567999999999999999999999999999999999999999874 56778888777788999
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCC
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLL 439 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~ 439 (451)
+++++||+++++|++++.|++++++|+++++++|++||.|++|+||||+
T Consensus 242 ~~~~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~ 290 (384)
T PRK06434 242 PDPIQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTE 290 (384)
T ss_pred CCHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChH
Confidence 9999999999999999999999999999999999999999999999995
No 38
>PRK06767 methionine gamma-lyase; Provisional
Probab=100.00 E-value=2.4e-48 Score=401.73 Aligned_cols=282 Identities=32% Similarity=0.525 Sum_probs=259.9
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.++..+|.|+||++|+.++||++||+++|.++++++
T Consensus 5 ~~~t~~~~~~~~~~--~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~G~~~al~~ 82 (386)
T PRK06767 5 HMETALIHHGYTSE--EHKGSLTPPLFQTSTFTFETAQQGEASFAGVDPSYIYSRLGNPTVKLFEERMAVLEGGEEALAF 82 (386)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCccceecCCHHHHHHhhccCcCCccccCCCCcchHHHHHHHHHHhCCCcEEEE
Confidence 46899999996532 2468999999999999999998888777666667999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+||++|+..++.+++++||+|+++++.|++++..+.......|+++.+++..|+++++++++++ +++|++|+|+||+|.
T Consensus 83 ~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~~~i~~~-tklV~lesp~NptG~ 161 (386)
T PRK06767 83 GSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIENKIRPN-TKLIFVETPINPTMK 161 (386)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhhCcC-ceEEEEeCCCCCCce
Confidence 9999999999999999999999999999999888877777889999999888999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHH-HHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR-NLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr-~~~~~~G~~ 390 (451)
+.|+++|.++|+++|+++|+|++|+.++.+.++..|+|++++|+||+++|++++++|+++++++++++++ ..+..+|..
T Consensus 162 v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~ 241 (386)
T PRK06767 162 LIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGI 241 (386)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999988888999999999999999999999988999999998887754 556668888
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecC
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFIT 436 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yP 436 (451)
++++++|+++++|+++..|++++.+|++.++++|+++|+|+.|+||
T Consensus 242 ~~~~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p 287 (386)
T PRK06767 242 MAPFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP 287 (386)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECC
Confidence 9999999999999999999999999999999999999999999999
No 39
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.1e-48 Score=402.53 Aligned_cols=286 Identities=35% Similarity=0.578 Sum_probs=260.6
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
.++|+++|.|...+ ..+++++||||+|+||.+++.++ ...+|.|+|+++|+...||++|++++|.+.++++
T Consensus 12 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~-------~~~~~~Y~r~~~p~~~~Le~~lA~~~g~~~~i~~ 82 (388)
T PRK07811 12 GFATRAIHAGYEPD--PATGAVNPPIYASSTFAQDGVGG-------LRGGYEYARTGNPTRTALEEQLAALEGGAYGRAF 82 (388)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCCccc-------ccCCCcccCCCCccHHHHHHHHHHHhCCCceEEe
Confidence 36899999996532 34689999999999999887432 1236899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+||++|+.+++.+++++||+|+++++.|++++..+...+..+|+++.+++..|+++|+++++++ +++|++|+|+||+|.
T Consensus 83 ~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~~~i~~~-tklV~ie~p~NPtg~ 161 (388)
T PRK07811 83 SSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVRAAITPR-TKLIWVETPTNPLLS 161 (388)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHHHhcCcC-CeEEEEECCCCCcce
Confidence 9999999999999999999999999999999888777777889999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G~~ 390 (451)
+.|+++|.++|+++|+++|+|++|+.+..+.++.+|+|++++|++|+++||+++++|+++++ +++.++++..+...|..
T Consensus 162 ~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~ 241 (388)
T PRK07811 162 ITDIAALAELAHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAV 241 (388)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999888888889999999999999999999899988875 67778888777778888
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
++++++|+++++|+++..|++++.+|++.++++|++||+|++|+||+|++||++++.
T Consensus 242 ~s~~~a~l~~~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~ 298 (388)
T PRK07811 242 PGPFDAYLTLRGLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVA 298 (388)
T ss_pred CCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHH
Confidence 999999999999999999999999999999999999999999999999999998764
No 40
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=100.00 E-value=3e-48 Score=405.05 Aligned_cols=292 Identities=35% Similarity=0.570 Sum_probs=259.6
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 013019 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (451)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~s 232 (451)
++|+++|.|...+ ..+++++||||+++||.|++.+++.+.+.....+|.|+|+++|+.++||++||+++|.+.+++++
T Consensus 2 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~ysr~~~p~~~~le~~lA~l~g~~~~v~~~ 79 (418)
T TIGR01326 2 FETLQLHAGQEPD--PTTGSRAVPIYQTTSYVFDSTEHAAALFGLQEAGNIYSRLMNPTTDVLEQRIAALEGGVAALAVA 79 (418)
T ss_pred ccceeEECCCCCC--CCCCCccCCccCCCCeecCCHHHHHHhhccCcCCceeECCCChhHHHHHHHHHHHhCCCeEEEEc
Confidence 5688999996532 23578999999999999999987666554344568999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccc
Q 013019 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (451)
Q Consensus 233 SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v 312 (451)
|||+|+..++.+++++||+|+++++.|++++..+...+...|+++.+++..|+++++++++++ +++|++|+|+||+|.+
T Consensus 80 sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~-t~~V~le~p~NPtg~v 158 (418)
T TIGR01326 80 SGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEFEKAIDEN-TKAVFAETIGNPAINV 158 (418)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCCee
Confidence 999999999999999999999999999999888877788899999999988999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHH----------------
Q 013019 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL---------------- 376 (451)
Q Consensus 313 ~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~el---------------- 376 (451)
.|+++|.++|+++|+++|+|++|+.++.+.++.+|+|++++|+||+++|+|+++||+++.++++
T Consensus 159 ~dl~~I~~la~~~~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~ 238 (418)
T TIGR01326 159 PDIEAIAEVAHAHGVPLIVDNTFATPYLCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPS 238 (418)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCchhhcCCchhcCCeEEEECccccccCCccceEEEEEecccccccccccccccCCCCc
Confidence 9999999999999999999999998888888888999999999999999999888888754321
Q ss_pred ---------------HHHHH-HHhHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCC
Q 013019 377 ---------------VTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLC 440 (451)
Q Consensus 377 ---------------i~~lr-~~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~ 440 (451)
+.+.+ .....+|..++|+++|+++++++++..|++++.+|+..++++|.+||+|..|+||+|++
T Consensus 239 q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~ 318 (418)
T TIGR01326 239 YHGLVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLAS 318 (418)
T ss_pred cccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 11112 23455688899999999999999999999999999999999999999999999999999
Q ss_pred CCCCccc
Q 013019 441 FYNGTLV 447 (451)
Q Consensus 441 ~p~~~lv 447 (451)
||++++.
T Consensus 319 ~~~~~~~ 325 (418)
T TIGR01326 319 HPHHALA 325 (418)
T ss_pred CccHHHH
Confidence 9998663
No 41
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=4.6e-48 Score=398.72 Aligned_cols=283 Identities=31% Similarity=0.527 Sum_probs=257.3
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 013019 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (451)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~s 232 (451)
++|+++|.|... . .+++++||||+++||.+++.+ +..+|.|+|+++|+.++||+++++++|.+++++++
T Consensus 1 ~~t~~~~~~~~~--~-~~~~~~~pi~~~~~~~~~~~~--------~~~~~~Y~r~~~p~~~~le~~la~l~g~~~~l~~~ 69 (378)
T TIGR01329 1 LSTLLVNTDNKN--D-PYDASSMPIYQTATFKQPLAI--------ENGPYDYTRSGNPTRTALESLLAKLDKADRAFAFS 69 (378)
T ss_pred CCceeEeCCCCC--C-CCCCcCCCeecCcceecCCcc--------ccCCCccCCCCChHHHHHHHHHHHHhCCCcEEEEC
Confidence 368889999542 2 368999999999999987632 12468999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccc
Q 013019 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (451)
Q Consensus 233 SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v 312 (451)
||++|+.+++. ++++||+|+++++.|+++..++...+..+|+++.++|..|++++++++++ ++++|++|+|+||+|.+
T Consensus 70 sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le~~i~~-~tklv~le~psnptg~v 147 (378)
T TIGR01329 70 SGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVKAALGP-KTKLVLLESPTNPLQKI 147 (378)
T ss_pred CHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCc-CceEEEEECCCCCCCee
Confidence 99999988665 88999999999999999888877777889999999999999999999987 49999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhCCCc
Q 013019 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (451)
Q Consensus 313 ~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G~~l 391 (451)
.|+++|+++||++|+++|+|++++.+..++++++|+|++++|++|+++||+++++|+++++ +++.++++..+...|..+
T Consensus 148 ~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~ 227 (378)
T TIGR01329 148 VDIRKISEMAHAQNALVVVDNTMMSPLLCNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGL 227 (378)
T ss_pred ecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcC
Confidence 9999999999999999999999999988899999999999999999999998899999875 566688888877788899
Q ss_pred cHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcccc
Q 013019 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLVG 448 (451)
Q Consensus 392 s~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv~ 448 (451)
+++++|+++++++++..|++++.+|+..+++||++||.|++|+||+|++||++++++
T Consensus 228 ~~~~a~l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~ 284 (378)
T TIGR01329 228 APFDCWLLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHF 284 (378)
T ss_pred CHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHH
Confidence 999999999999999999999999999999999999999999999999999988754
No 42
>PRK06460 hypothetical protein; Provisional
Probab=100.00 E-value=7.5e-48 Score=396.85 Aligned_cols=282 Identities=37% Similarity=0.629 Sum_probs=258.1
Q ss_pred CCccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 013019 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (451)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv 230 (451)
|+++|.++|.|.+ ..+++++||||+++||.|++. .+|.|+|.++|+.++||++||+++|.+.+++
T Consensus 1 ~~~~t~~~~~~~~----~~~~~~~~pi~~~~~~~~~~~-----------~~~~y~r~~~p~~~~L~~~lA~l~g~~~~v~ 65 (376)
T PRK06460 1 MKDATRTVREDID----EATGAITTPIYQTTAYHYPEG-----------EKYRYSREANPTVLELTKKIVELENAEMGVA 65 (376)
T ss_pred CCcceeeeecCCC----CCCCCccCCccCCcceeeCCC-----------CCcceeCCCCccHHHHHHHHHHHhCCCcEEE
Confidence 4689999999952 235789999999999998863 2589999999999999999999999989999
Q ss_pred eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcc
Q 013019 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (451)
Q Consensus 231 ~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG 310 (451)
+++|++|+..++.+++++||+|+++.+.|++++..+...++..|+++..++..+.+.+++.+++ ++++|++|+|+||+|
T Consensus 66 ~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~l~~~~~~-~tklV~l~sp~NPtG 144 (376)
T PRK06460 66 FSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNIIEKAKSK-RYDVVFVENITNPLL 144 (376)
T ss_pred eCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCC
Confidence 9999999999999999999999999999999998887788889999998887666666666555 599999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCC
Q 013019 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA 390 (451)
Q Consensus 311 ~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ 390 (451)
.+.|+++|.++|+++|+++|+|++|+.++...++..|+|++++|+||+++|++|.++|+++++++++++++..+..+|..
T Consensus 145 ~v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~ 224 (376)
T PRK06460 145 RVVDITELSKVCKENGSILIVDATFSTPINQKPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTS 224 (376)
T ss_pred cccCHHHHHHHHHHcCCEEEEECCcCccccCChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999887777778899999999999999999999999999999999999888888988
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLVG 448 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv~ 448 (451)
+++..+|+++++++++..|++++.+|++.++++|++||.|++|+||+|++||++++..
T Consensus 225 ~~~~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~ 282 (376)
T PRK06460 225 LDPHAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIAR 282 (376)
T ss_pred CCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHH
Confidence 9999999999999999999999999999999999999999999999999999987643
No 43
>PRK07582 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=1.3e-47 Score=393.85 Aligned_cols=281 Identities=31% Similarity=0.464 Sum_probs=250.5
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
.+.|+++|.|...+ ..+++++||||+++||.|++. .+..+|.|+||++|+..+||++|++++ .++++++
T Consensus 3 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~--------~~~~~~~y~ry~~p~~~~Le~~lA~l~-~~~~v~~ 71 (366)
T PRK07582 3 GDGTRSVHAGGPEA--VPGEPVLPGPVFAAPYHLSPG--------EPTGPDTYGRASNPTWRALEAALGELE-GAEALVF 71 (366)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccccceEEccCc--------cccCCceeECCCCccHHHHHHHHHHHc-CCCEEEE
Confidence 36799999985432 236899999999999999842 123468899999999999999999999 6889999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+||++|+..++.+++++||+|+++++.|+++..++...++.+|+++.+++..+... .+.+ ++++|++|+|+||+|.
T Consensus 72 ~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~---~~~~-~t~lV~le~p~NPtg~ 147 (366)
T PRK07582 72 PSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE---AALA-GADLVLAETPSNPGLD 147 (366)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH---Hhcc-CceEEEEECCCCCCCC
Confidence 99999999999999999999999999999988777666778899999998765332 2334 4899999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ 390 (451)
+.|+++|+++|+++|+++|+|++|+.+..+.|+++|+|++++|+||+++||+++++|++++ +++++++++.++...|..
T Consensus 148 v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~ 227 (366)
T PRK07582 148 VCDLAALAAAAHAAGALLVVDNTTATPLGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAI 227 (366)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCCCccccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998888888999999999999999999999999999987 478889999888888999
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
++++++|+++++|+++..|++++++|++.++++|++||+|.+|+||+|++||++++.
T Consensus 228 ~~~~~a~l~~r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~ 284 (366)
T PRK07582 228 PGPFEAWLAHRSLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVA 284 (366)
T ss_pred CCHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHH
Confidence 999999999999999999999999999999999999999999999999999976543
No 44
>PRK05968 hypothetical protein; Provisional
Probab=100.00 E-value=3.8e-47 Score=393.31 Aligned_cols=284 Identities=34% Similarity=0.532 Sum_probs=261.7
Q ss_pred cccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHH
Q 013019 156 LAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGM 235 (451)
Q Consensus 156 ~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~ 235 (451)
.++|++... ..+++++||||+++||.|++.+++.+.+.++..+|.|+|+++|+.++||+++++++|.+.+++++|||
T Consensus 12 ~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~av~~~sG~ 88 (389)
T PRK05968 12 ALITAHDEG---NAFDAVVPPIFQTSLFTFDSYDEMEDVYAGEKVRPIYSRGDNPTVRAFEEMLAKLEGAEDARGFASGM 88 (389)
T ss_pred heeecCCCc---cCCCCccCCccCCcceecCCHHHHHHhhcCCCCCccccCCCChhHHHHHHHHHHHhCCCcEEEECCHH
Confidence 467887653 35789999999999999999988887776666679999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccH
Q 013019 236 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV 315 (451)
Q Consensus 236 aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL 315 (451)
+|+..++.+++++||+|+++.+.|++++..+...+...|+++.++|..|++++++++ + ++++|++|+|+|+++.+.|+
T Consensus 89 ~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~dl 166 (389)
T PRK05968 89 AAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVAKAL-P-GAKLLYLESPTSWVFELQDV 166 (389)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHHHhc-c-cCCEEEEECCCCCCCcHHHH
Confidence 999999999999999999999999999988877788899999999998999999998 4 38999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH-hhCCCccHH
Q 013019 316 KLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGALNPN 394 (451)
Q Consensus 316 ~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~-~~G~~ls~~ 394 (451)
++|.++|+++|+++|+|++|+.+..++++.+|+|++++|+||+++||+++++|+++++++++++++..+. .+|..++++
T Consensus 167 ~~i~~la~~~gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~ 246 (389)
T PRK05968 167 AALAALAKRHGVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPF 246 (389)
T ss_pred HHHHHHHHHcCCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChH
Confidence 9999999999999999999999887888899999999999999999998889999999999988886554 568889999
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCC
Q 013019 395 AAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNG 444 (451)
Q Consensus 395 ~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~ 444 (451)
++|+++++|+++..|++++.+++++++++|+++|+|+.|+||+|++||..
T Consensus 247 ~A~~~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~ 296 (389)
T PRK05968 247 EAWLLLRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPA 296 (389)
T ss_pred HHHHHHcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHH
Confidence 99999999999999999999999999999999999999999999999864
No 45
>PRK08064 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=4.4e-47 Score=392.92 Aligned_cols=285 Identities=34% Similarity=0.570 Sum_probs=260.8
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|...+ ..++++.+|||+++||.|++.++ ..+|.|+|.++|+.+.||++||+++|.+.++++
T Consensus 6 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~ 75 (390)
T PRK08064 6 SIDTLLLHNQYKHD--KQTGAVNVPIYHASTFHQFDFDT--------FGKYDYSRSGNPTREALEDIIAELEGGTKGFAF 75 (390)
T ss_pred CcccceeeCCCCCC--CCCCCccCCcccCcceecCcccc--------cCCCcccCCCChhHHHHHHHHHHHhCCCCeEEE
Confidence 36799999996532 34689999999999999887542 246889999999999999999999999899999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|||.|+..++. ++++||+||++++.|++++..+...++..|+++.+++..|+++++++++++ |++|++|+|+||+|.
T Consensus 76 ~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~-tklV~l~~p~NptG~ 153 (390)
T PRK08064 76 ASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEVAQNIKPN-TKLFYVETPSNPLLK 153 (390)
T ss_pred CCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCcE
Confidence 999999988886 789999999999999999888877788899999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G~~ 390 (451)
+.|+++|.++|+++|+++|+|++|+.+..+.++++|+|++++|+||+++||+++++|+++.+ ++++++++..+..+|..
T Consensus 154 ~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~ 233 (390)
T PRK08064 154 VTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAV 233 (390)
T ss_pred eccHHHHHHHHHHcCCEEEEECCCCcccccCchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999888888889999999999999999999889988765 68889999998889999
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLVG 448 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv~ 448 (451)
++++++|+++++++++..|++++.+|+..+++||++||.|.+|+||+|++||++++..
T Consensus 234 ~~~~~a~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~ 291 (390)
T PRK08064 234 LGVQDCWLVLRGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQ 291 (390)
T ss_pred CCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHH
Confidence 9999999999999999999999999999999999999999999999999999987654
No 46
>PLN02242 methionine gamma-lyase
Probab=100.00 E-value=7.1e-47 Score=394.48 Aligned_cols=289 Identities=30% Similarity=0.495 Sum_probs=258.6
Q ss_pred ccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhccc----CCccccCCCchhHHHHHHHHHhhhCCCcE
Q 013019 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR----ASFEYGRYGNPTTVVVEEKMSALEGAEST 228 (451)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~----~~~~Y~R~~npt~~~Lee~LA~l~gae~~ 228 (451)
..++++|+|...+ .+++++||||+|+||.|++.+++.+.+.++. .+|.|+|++||+.++||++||+++|.+.+
T Consensus 18 ~~~~~~~~~~~~~---~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~Pt~~~LE~~lA~l~g~~~~ 94 (418)
T PLN02242 18 PAAALASARHEFG---EHGGVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFYIYSRHFNPTVLNLGRQMAALEGTEAA 94 (418)
T ss_pred hHHHHhcCCCCCC---CCCCccCCcccCCceecCCHHHHHHHhcccccccCCCccccCCCChhHHHHHHHHHHHhCCCeE
Confidence 5688999997643 2467899999999999999988887765542 35899999999999999999999999999
Q ss_pred EEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhh-cCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCC
Q 013019 229 VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 307 (451)
Q Consensus 229 vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~-~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsN 307 (451)
++++||++|+..++.+++++||+|+++++.|+++...+...+. ..|+++++++..|+++++++++++++++|++|+|+|
T Consensus 95 l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i~~~~tklV~lesp~N 174 (418)
T PLN02242 95 YCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAVVPGKTKVLYFESISN 174 (418)
T ss_pred EEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhcCcCCCEEEEEecCCC
Confidence 9999999999999999999999999999999998877655543 479999999988999999999863499999999999
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH--
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-- 385 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~-- 385 (451)
|||.+.|+++|+++|+++|++||+|++|+ ++..++..+|+|++++|+||+++|++++++|+++++++++++++..+.
T Consensus 175 PtG~v~dl~~I~~la~~~gi~livDea~~-~~~~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~ 253 (418)
T PLN02242 175 PTLTVADIPELARIAHEKGVTVVVDNTFA-PMVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGA 253 (418)
T ss_pred CCCcccCHHHHHHHHHHhCCEEEEECCCC-ccCCCHHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhh
Confidence 99999999999999999999999999996 555677888999999999999999999999999999999998886643
Q ss_pred --hhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 386 --VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 386 --~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
..|..+.+..+|+++++++++..|++++.+|++.++++|++++ .+|+||+|++||++.+.
T Consensus 254 ~~~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~--~~V~yP~l~~~p~~~~~ 315 (418)
T PLN02242 254 LMLLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELG--LKVIYPGLEDHPQHALL 315 (418)
T ss_pred hhccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC--CEEECCCCCCCccHHHH
Confidence 4677889999999999999999999999999999999999996 38999999999998764
No 47
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=1.5e-46 Score=385.69 Aligned_cols=277 Identities=32% Similarity=0.556 Sum_probs=252.9
Q ss_pred CCCccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEE
Q 013019 150 LSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTV 229 (451)
Q Consensus 150 ~~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~v 229 (451)
|++++|+++|.|...+ ..+++++||||+|+||.+++.+ +..+|.|+||+||+...||++|++++|.+.++
T Consensus 2 ~~~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~pt~~~le~~la~l~g~~~~~ 71 (366)
T PRK08247 2 MSTIETKLAQIGNRSD--ERTGTVNPPVYFSTAYRHEGIG--------ESTGFDYSRTGNPTRGVLEQAIADLEGGDQGF 71 (366)
T ss_pred CCCcchhheeCCCCCC--CCCCCccCCcccCcccccCCCC--------CcCCccccCCCCchHHHHHHHHHHHhCCCcEE
Confidence 3468899999996532 2468999999999999887632 23469999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCc
Q 013019 230 IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPF 309 (451)
Q Consensus 230 v~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPt 309 (451)
+++|||+|+.+++ +++++||+|+++++.|++++..+...++.+|+++.++|..|+++++++++++ +++|++|+|+||+
T Consensus 72 ~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~-tklv~le~P~NP~ 149 (366)
T PRK08247 72 ACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAIEQAITPN-TKAIFIETPTNPL 149 (366)
T ss_pred EEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHHHHHhcccC-ceEEEEECCCCCC
Confidence 9999999998765 6889999999999999999988887888899999999999999999999874 9999999999999
Q ss_pred cccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhC
Q 013019 310 LRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG 388 (451)
Q Consensus 310 G~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G 388 (451)
|.+.|+++|.++|+++|+++|+|++|+.++.+.|++.|+|++++|+||+++||+|+++|+++++ ++++++++..+...|
T Consensus 150 ~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g 229 (366)
T PRK08247 150 MQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAG 229 (366)
T ss_pred CcHHHHHHHHHHHHHcCCEEEEECCCccccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999988888888999999999999999999999999986 678888888888888
Q ss_pred CCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCC
Q 013019 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLL 438 (451)
Q Consensus 389 ~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL 438 (451)
..++++++|+++++++++..|++++.+|++.++++|++||+|..|+||+.
T Consensus 230 ~~~s~~~a~l~~~~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~ 279 (366)
T PRK08247 230 AVLSPFDSWLLIRGMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGR 279 (366)
T ss_pred CCCChHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCc
Confidence 88999999999999999999999999999999999999999999999975
No 48
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.95 E-value=1.8e-26 Score=242.73 Aligned_cols=212 Identities=23% Similarity=0.303 Sum_probs=180.9
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCC---CcchHHHHHHhhhcCCcEEEEeCC---C
Q 013019 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDC---YRKTRIFIETVLPKMGITATVIDP---A 283 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~---Y~~t~~~l~~~l~~~Gi~v~~vd~---~ 283 (451)
...+.+|+.+++++|++++++++||++|+.+++. .+.+||+||+++.. |++++.+. ..++..|+++.+++. .
T Consensus 122 ~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~-~l~~GdeVIvs~~e~v~~ggs~~i~-~~~~~~G~~~~~v~~~~~~ 199 (454)
T TIGR00474 122 SRYSHVEGLLCELTGAEDALVVNNNAAAVLLALN-TLAKGKEVIVSRGELVEIGGSFRIP-DVMEQSGAKLVEVGTTNRT 199 (454)
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhCCcCEEEECCChhhhhcchhhHH-HHHHHcCCEEEEeCCCCCC
Confidence 4468899999999999999999999999988884 57899999999876 66766653 456778999999875 5
Q ss_pred CHHHHHHhhcCCCeEEEEEeCCCCCc--c--ccccHHHHHHHHHhcCCEEEEecCCC------------CCCccccccCC
Q 013019 284 DMEGLEAALNNNNVSLFFTESPTNPF--L--RCVDVKLVSDLCHKKGAIVCIDGTFA------------TPLNQKALSLG 347 (451)
Q Consensus 284 D~d~Le~ai~~~~tklV~lesPsNPt--G--~v~DL~~IaelA~~~g~~lVVD~tfa------------~~~~~~pl~~G 347 (451)
++++++++++++ |++|++++++|++ | .+.|+++|+++||++|+++++|++.+ .|..++++++|
T Consensus 200 ~l~dle~aI~~~-T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~G 278 (454)
T TIGR00474 200 HLKDYEDAITEN-TALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAG 278 (454)
T ss_pred CHHHHHHhcCcC-CEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcC
Confidence 789999999885 9999999999995 4 68899999999999999999999732 23345778899
Q ss_pred CcEEEECCcccCCccccceeEEEEeCHHHHHHH---------H-------HHhHhhCCCccHHHHHHHHHhhHHHHHHHH
Q 013019 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI---------R-------NLHHVLGGALNPNAAYLIIRGMKTLHLRVQ 411 (451)
Q Consensus 348 aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~l---------r-------~~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~ 411 (451)
+|++++|.+|+++||. +|++++++++++++ + .+...+|..++++.+|+.+++|+++..|++
T Consensus 279 aDiv~fSg~K~LgGp~---~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~ 355 (454)
T TIGR00474 279 VDLVTFSGDKLLGGPQ---AGIIVGKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPE 355 (454)
T ss_pred CCEEEecCccccCCCe---EEEEEECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHH
Confidence 9999999999999994 89999999887543 2 223456777889999999999999999999
Q ss_pred HHHHHHHHHHHHHHcC
Q 013019 412 QQNSTALRMAEILEAH 427 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~~ 427 (451)
++.++|++++++|++.
T Consensus 356 ~~~~~A~~la~~L~~~ 371 (454)
T TIGR00474 356 ELRARAERLAKRLKAA 371 (454)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999875
No 49
>PRK04311 selenocysteine synthase; Provisional
Probab=99.94 E-value=2.3e-25 Score=234.93 Aligned_cols=213 Identities=24% Similarity=0.349 Sum_probs=173.1
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCC---cchHHHHHHhhhcCCcEEEEeCC---C
Q 013019 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCY---RKTRIFIETVLPKMGITATVIDP---A 283 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y---~~t~~~l~~~l~~~Gi~v~~vd~---~ 283 (451)
+..+.+|+.+++++|++++++++||++|+.+++.+ +.+||+||+++..+ ++++.+ ...+...|+++.+++. .
T Consensus 127 ~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e~~~~ggs~~i-~~~~~~~G~~l~~v~~~~~t 204 (464)
T PRK04311 127 SRDRALAALLCALTGAEDALVVNNNAAAVLLALNA-LAAGKEVIVSRGELVEIGGAFRI-PDVMRQAGARLVEVGTTNRT 204 (464)
T ss_pred hHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHH-hCCCCEEEEcchhhhhcCcchhh-HHHHHHCCcEEEEECCCCCC
Confidence 44678999999999999999999999999988855 68999999998643 445543 3456778999888875 4
Q ss_pred CHHHHHHhhcCCCeEEEEEeCCCCC----ccccccHHHHHHHHHhcCCEEEEecC---------C---CCCCccccccCC
Q 013019 284 DMEGLEAALNNNNVSLFFTESPTNP----FLRCVDVKLVSDLCHKKGAIVCIDGT---------F---ATPLNQKALSLG 347 (451)
Q Consensus 284 D~d~Le~ai~~~~tklV~lesPsNP----tG~v~DL~~IaelA~~~g~~lVVD~t---------f---a~~~~~~pl~~G 347 (451)
++++++++|+++ |++|++++++|| ++...|+++|+++||+||+++++|+. | ..+..++++++|
T Consensus 205 ~~~dle~aI~~~-TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~G 283 (464)
T PRK04311 205 HLRDYEQAINEN-TALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAG 283 (464)
T ss_pred CHHHHHHhcCcc-CeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcC
Confidence 688999999875 999999999998 34678999999999999999999994 3 234456778899
Q ss_pred CcEEEECCcccCCccccceeEEEEeCHHHHHHHHH--HhHhh---CCCcc-----------HHHHHHHHHhhHHHHHHHH
Q 013019 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHHVL---GGALN-----------PNAAYLIIRGMKTLHLRVQ 411 (451)
Q Consensus 348 aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~--~~~~~---G~~ls-----------~~~a~l~lrgL~tl~~Rl~ 411 (451)
+|++++|.+|+++||. +|+++++++++++++. +.+.+ +..++ +..++..+++++++..|++
T Consensus 284 aDiv~fSg~K~LgGp~---~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~ 360 (464)
T PRK04311 284 VDLVTFSGDKLLGGPQ---AGIIVGKKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPE 360 (464)
T ss_pred CcEEEecCcccccCCc---eEEEEEcHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHH
Confidence 9999999999999995 8999999999988773 11111 23333 4445555677888999999
Q ss_pred HHHHHHHHHHHHHHcCC
Q 013019 412 QQNSTALRMAEILEAHP 428 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~~p 428 (451)
++.++|++++++|++++
T Consensus 361 ~~~~~A~~la~~L~~~~ 377 (464)
T PRK04311 361 ELRARAERLAAALKAAL 377 (464)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999999986
No 50
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.92 E-value=3.2e-23 Score=214.24 Aligned_cols=252 Identities=13% Similarity=0.186 Sum_probs=187.3
Q ss_pred CccccCCCccCCHHHHHHHHhcccC----CccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCe
Q 013019 176 PVVNTSAYFFKKTAELIDFKEKRRA----SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGH 251 (451)
Q Consensus 176 Pi~~sst~~~~~~~~~~~~~~~~~~----~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~ 251 (451)
||-+.....-.-.+.+.++...... .+.+++...|..+++|+.+|+++|.++++++++|++++..++.+++++||+
T Consensus 25 ~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~~~gd~ 104 (387)
T PRK09331 25 PIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLCKKGDY 104 (387)
T ss_pred hhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcCCCCE
Confidence 4554444433333444444322111 345555667889999999999999998998889999999999999999999
Q ss_pred EEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-------CCHHHHHHhhcCC------CeEEEEEeCCCCCccccccHHHH
Q 013019 252 IVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNNN------NVSLFFTESPTNPFLRCVDVKLV 318 (451)
Q Consensus 252 VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-------~D~d~Le~ai~~~------~tklV~lesPsNPtG~v~DL~~I 318 (451)
|+++.+.|.+.+.. +...|+++.+++. .|++++++++++. ++++|++++|+|++|.+.|+++|
T Consensus 105 Vlv~~~~h~s~~~~----~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I 180 (387)
T PRK09331 105 VVLDGLAHYTSYVA----AERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKV 180 (387)
T ss_pred EEECCCchHHHHHH----HHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHH
Confidence 99999988876643 4556888887765 4789999988631 48999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH--------hhCC
Q 013019 319 SDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------VLGG 389 (451)
Q Consensus 319 aelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--------~~G~ 389 (451)
.++|+++|+++++|++++.+. ......+|+|+++.|++|++++++ .+|+++++++++++++.... .+|.
T Consensus 181 ~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~--~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (387)
T PRK09331 181 AKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASA--PSGVLATTEEYADKVFRTSRKFGVKEVELLGC 258 (387)
T ss_pred HHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCC--CEEEEEECHHHHhhcccccCCCcccceeeece
Confidence 999999999999999998653 234446789999999999998764 58999999998887765432 1333
Q ss_pred CccHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Q 013019 390 ALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~---tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V 433 (451)
.+.+..++.++.+++ ....+++++.++++.+.+.|++.++++.+
T Consensus 259 ~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~~~ 305 (387)
T PRK09331 259 TLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIEGFKQL 305 (387)
T ss_pred ecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 333222332233333 33345677788899999999999877543
No 51
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.92 E-value=5.5e-23 Score=210.00 Aligned_cols=222 Identities=13% Similarity=0.219 Sum_probs=171.2
Q ss_pred cCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC---
Q 013019 205 GRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--- 281 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd--- 281 (451)
+...+|...+|++++++++|.++.+++++|++++..++.+++++||+|+++.+.|.+.+. .+...|+++..++
T Consensus 39 ~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~v~~~~ 114 (361)
T cd06452 39 DEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYV----AAERAGLNVREVPNTG 114 (361)
T ss_pred ccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHH----HHHhcCCEEEEEecCC
Confidence 334568899999999999999877777778899999999999999999999998887653 3456788887764
Q ss_pred ----CCCHHHHHHhhcC------CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcE
Q 013019 282 ----PADMEGLEAALNN------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADL 350 (451)
Q Consensus 282 ----~~D~d~Le~ai~~------~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDi 350 (451)
..|++++++++++ .++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+. .....++|+|+
T Consensus 115 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d~ 194 (361)
T cd06452 115 HPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADF 194 (361)
T ss_pred CCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCCE
Confidence 2378899988862 248999999999999999999999999999999999999987653 23445678999
Q ss_pred EEECCcccCCccccceeEEEEeCHHHHHHHHHHhHh--------hCCCccHHHHHHHHHhhHHHH---HHHHHHHHHHHH
Q 013019 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------LGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALR 419 (451)
Q Consensus 351 Vv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--------~G~~ls~~~a~l~lrgL~tl~---~Rl~~~~~nA~~ 419 (451)
++.|+||++++++ ++|+++++++++++++..+.. +|.......++.++.+++.+. .++.+..+++++
T Consensus 195 ~~~s~~K~l~~~~--~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 272 (361)
T cd06452 195 IVGSGHKSMAASA--PIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARW 272 (361)
T ss_pred EEecCCccccCCC--CeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998654 689999999999988765432 222222222333344444332 344555567789
Q ss_pred HHHHHHcCCCeEE
Q 013019 420 MAEILEAHPKVLL 432 (451)
Q Consensus 420 Lae~L~~~p~V~~ 432 (451)
+.+.|++.|+++.
T Consensus 273 l~~~L~~l~g~~v 285 (361)
T cd06452 273 FVAELEKIEGIKQ 285 (361)
T ss_pred HHHHHhcCCCeEE
Confidence 9999999988744
No 52
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.91 E-value=7.4e-23 Score=212.30 Aligned_cols=219 Identities=17% Similarity=0.189 Sum_probs=168.2
Q ss_pred ccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~ 283 (451)
|+|.. +..+||+++|+++|.+++++++||+.|+..++.+++++||+|+++++.|+++...+ ...+.++.+++..
T Consensus 39 yg~~~--~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~~~GD~Vl~~~~~h~s~~~~~----~l~~~~~~~~~~~ 112 (392)
T PLN03227 39 YGTID--AHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFAKRGDLLVVDRGVNEALLVGV----SLSRANVRWFRHN 112 (392)
T ss_pred cCChH--HHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhCCCCCEEEEeccccHHHHHHH----HHcCCeEEEeCCC
Confidence 66654 78999999999999999999999999999999999999999999999999876543 2224566666666
Q ss_pred CHHHHHH---hhcC----------CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc---------
Q 013019 284 DMEGLEA---ALNN----------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--------- 341 (451)
Q Consensus 284 D~d~Le~---ai~~----------~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~--------- 341 (451)
|.+++++ .+++ .++++|++|+|.||+|.+.|+++|.++|++||+++|+||+++.+...
T Consensus 113 d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~ 192 (392)
T PLN03227 113 DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEH 192 (392)
T ss_pred CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHH
Confidence 6655554 3321 24899999999999999999999999999999999999998754322
Q ss_pred ---ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh--HhhCCCccHHHHHHHHHhhHHH---HHHHHHH
Q 013019 342 ---KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQ 413 (451)
Q Consensus 342 ---~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~--~~~G~~ls~~~a~l~lrgL~tl---~~Rl~~~ 413 (451)
.| ..|+|+++.|+||+++. ++|++++++++++.++... ..++..++|..++.++..++.+ +.++++.
T Consensus 193 ~g~~p-~~~~Div~~slsk~~g~----~gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l 267 (392)
T PLN03227 193 AGLKP-MVHAEIVTFSLENAFGS----VGGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRL 267 (392)
T ss_pred cCCCC-CCCceEEEeechhhhhc----cCcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 22 24789999999999863 4788889998887766432 2456666787766665555432 4567788
Q ss_pred HHHHHHHHHHHHc--CCCeEEE
Q 013019 414 NSTALRMAEILEA--HPKVLLL 433 (451)
Q Consensus 414 ~~nA~~Lae~L~~--~p~V~~V 433 (451)
.++.+.+.+.|++ +|.|..|
T Consensus 268 ~~~~~~l~~~L~~~~~~~~~~~ 289 (392)
T PLN03227 268 HDSIANLYSTLTNSSHPYALKL 289 (392)
T ss_pred HHHHHHHHHHHHhcCCcccccc
Confidence 8889999999874 4444333
No 53
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=5.2e-22 Score=206.01 Aligned_cols=222 Identities=19% Similarity=0.256 Sum_probs=164.5
Q ss_pred chhHHHHHHHHHhh----hC----CCc-EEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEE
Q 013019 209 NPTTVVVEEKMSAL----EG----AES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (451)
Q Consensus 209 npt~~~Lee~LA~l----~g----ae~-~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~ 279 (451)
.....+|++++++. +| .++ .++++++++|+..++++++.+||+||+++|.|......+ ...|.++..
T Consensus 64 ~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~----~~~gg~~v~ 139 (393)
T COG0436 64 SAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAV----KLAGGKPVP 139 (393)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHH----HhcCCEEEE
Confidence 33344566666554 44 234 455555559999999999999999999999999866433 445666555
Q ss_pred eCC--------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-----cc
Q 013019 280 IDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KA 343 (451)
Q Consensus 280 vd~--------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~-----~p 343 (451)
++. .|+++|++++++ +||+|++++||||||.+.+ +++|+++|++||++||.|++|...... ..
T Consensus 140 v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~ 218 (393)
T COG0436 140 VPLDEEENGFKPDLEDLEAAITP-KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSI 218 (393)
T ss_pred EeCCcCccCCcCCHHHHHhhcCc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCH
Confidence 542 268999999998 5999999999999999986 788999999999999999998654322 11
Q ss_pred ccC-C---CcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhCCCccHHHHHHHHHhhH------HHHHHHHH
Q 013019 344 LSL-G---ADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQ 412 (451)
Q Consensus 344 l~~-G---aDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~------tl~~Rl~~ 412 (451)
++. + .-|+++|+||.++.+|. +.||++++ +++++.+.+.+.....+.+...++.+...|+ .+....+.
T Consensus 219 ~~~~~~~~~~i~i~s~SK~~~mtGw-RvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~ 297 (393)
T COG0436 219 LELAGARDRTITINSFSKTYGMTGW-RIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREE 297 (393)
T ss_pred hhcCCCcceEEEEeccccccccccc-ceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHH
Confidence 222 1 24889999999998874 68999988 8888988888777776666666555554443 33333467
Q ss_pred HHHHHHHHHHHHHcCCCeEEEecC
Q 013019 413 QNSTALRMAEILEAHPKVLLLFIT 436 (451)
Q Consensus 413 ~~~nA~~Lae~L~~~p~V~~V~yP 436 (451)
..++++.+.+.|.+.+++..+.+|
T Consensus 298 ~~~rrd~l~~~l~~~~g~~~~~~p 321 (393)
T COG0436 298 YRERRDLLVEALNEIGGLSVVKPP 321 (393)
T ss_pred HHHHHHHHHHHHHhcCCeeeccCC
Confidence 788899999999998877665433
No 54
>PRK07324 transaminase; Validated
Probab=99.90 E-value=5.8e-22 Score=203.95 Aligned_cols=223 Identities=16% Similarity=0.215 Sum_probs=164.0
Q ss_pred ccccCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEE
Q 013019 202 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~ 278 (451)
..|+.. .....|++.|+++++. ++.++++++++|+..++.+++++||+|+++.|.|.... ..++..|.++.
T Consensus 56 ~~Y~~~--~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~~g~~v~ 129 (373)
T PRK07324 56 LTYGWI--EGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLY----DIPESLGAEVD 129 (373)
T ss_pred ccCCCC--CCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHcCCEEE
Confidence 455532 2345799999998752 45555555669999999999999999999999998754 34456687777
Q ss_pred EeCC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc-c---c
Q 013019 279 VIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-A---L 344 (451)
Q Consensus 279 ~vd~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~-p---l 344 (451)
.++. .|++++++++++ ++|+|++++|+||||.+.+ +++|+++|++||+++|+|++|....... . .
T Consensus 130 ~v~~~~~~~~~~d~~~l~~~~~~-~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~ 208 (373)
T PRK07324 130 YWQLKEENGWLPDLDELRRLVRP-NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIA 208 (373)
T ss_pred EEecccccCCCCCHHHHHHhCCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChh
Confidence 6652 378999998877 4999999999999999998 8899999999999999999986532211 1 1
Q ss_pred cC-CCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH---HHHH-HHHHHHHHHH
Q 013019 345 SL-GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLR-VQQQNSTALR 419 (451)
Q Consensus 345 ~~-GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t---l~~R-l~~~~~nA~~ 419 (451)
+. ...|++.|+||.++.+| .+.||++++++++++++..+.....+.+.+..+++...++. +..+ .+...++...
T Consensus 209 ~~~~~~I~~~s~SK~~~~~G-~RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~ 287 (373)
T PRK07324 209 DLYEKGISTNSMSKTYSLPG-IRVGWIAANEEVIDILRKYRDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAI 287 (373)
T ss_pred hccCCEEEEecchhhcCCcc-ceeEEEecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 11 23488999999998776 57899999999999999887655444555555555444432 2222 3444567778
Q ss_pred HHHHHHcCCCeEE
Q 013019 420 MAEILEAHPKVLL 432 (451)
Q Consensus 420 Lae~L~~~p~V~~ 432 (451)
+.++|++++.+..
T Consensus 288 l~~~l~~~~~~~~ 300 (373)
T PRK07324 288 LDEWVAKEPRVSY 300 (373)
T ss_pred HHHHHhcCCCceE
Confidence 8889988877654
No 55
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.2e-21 Score=203.68 Aligned_cols=214 Identities=16% Similarity=0.226 Sum_probs=156.9
Q ss_pred hHHHHHHHHHhhhCC---C-cEEEeCC-HHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 211 TTVVVEEKMSALEGA---E-STVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 211 t~~~Lee~LA~l~ga---e-~~vv~sS-G~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
.++.+.+.+++.+|. . +.+++++ +++++..++.+++++||+|++++|.|...... +...|.++..++.
T Consensus 83 LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~----~~~~g~~v~~v~~~~~ 158 (405)
T PRK06207 83 IRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKL----VEFFEGEMVPVQLDYL 158 (405)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHH----HHHcCCEEEEEecccc
Confidence 455566666666673 2 4444554 55999999999999999999999999876543 4455666554432
Q ss_pred -------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----ccc-c--
Q 013019 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-S-- 345 (451)
Q Consensus 283 -------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~pl-~-- 345 (451)
.|+++|+++++++ +++|++++|+||||.+++ +++|+++|+++|++||+|++|...... .++ .
T Consensus 159 ~~~~~~~~d~~~l~~~~~~~-~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~ 237 (405)
T PRK06207 159 SADKRAGLDLDQLEEAFKAG-VRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALP 237 (405)
T ss_pred CcccCCCcCHHHHHHhhhhc-CeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCC
Confidence 3789999998774 899999999999999996 778899999999999999998753211 111 1
Q ss_pred --CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh----HHHHHHHHHHHHHHHH
Q 013019 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALR 419 (451)
Q Consensus 346 --~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL----~tl~~Rl~~~~~nA~~ 419 (451)
...-+++.|+||.++.+| ++.||++++++++++++..+..+....+.+....+...+ ..+..+++++.++...
T Consensus 238 ~~~~~vi~i~SfSK~~~lpG-lRiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~ 316 (405)
T PRK06207 238 IDPENVITIMGPSKTESLSG-YRLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDD 316 (405)
T ss_pred CCcCcEEEEecchhhccCcc-cceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 122389999999998666 679999999999999988776665555544444433333 3356667777778888
Q ss_pred HHHHHHcCCCe
Q 013019 420 MAEILEAHPKV 430 (451)
Q Consensus 420 Lae~L~~~p~V 430 (451)
+.+.|++++++
T Consensus 317 l~~~L~~~~~~ 327 (405)
T PRK06207 317 LLRVLRGVEGV 327 (405)
T ss_pred HHHHHhcCCCc
Confidence 88999877654
No 56
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1e-21 Score=200.17 Aligned_cols=222 Identities=14% Similarity=0.238 Sum_probs=166.5
Q ss_pred cccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 203 EYGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 203 ~Y~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
.+.+|+++....|++.++++++. ++.+++++|+ +++..++.+++++||+|++++|.|.... ..++..|.++..+
T Consensus 52 ~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v 127 (351)
T PRK14807 52 QVNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYS----VYSKIAGAVEIPV 127 (351)
T ss_pred cccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEe
Confidence 34567777778999999999986 3566666666 7889999999999999999999998543 2345567776665
Q ss_pred CC-----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcccc---c-cCCCcEE
Q 013019 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---L-SLGADLV 351 (451)
Q Consensus 281 d~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~p---l-~~GaDiV 351 (451)
+. .|++++++++++.++++|++++|+||||.+.+.+++.+++++++.++|+|++|........ + .....++
T Consensus 128 ~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~ 207 (351)
T PRK14807 128 KLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIV 207 (351)
T ss_pred ecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEE
Confidence 42 4789999999754599999999999999999999999999998889999999865332111 1 1234589
Q ss_pred EECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHHHHcCCC
Q 013019 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK--TLHLRVQQQNSTALRMAEILEAHPK 429 (451)
Q Consensus 352 v~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~--tl~~Rl~~~~~nA~~Lae~L~~~p~ 429 (451)
+.|+||.++.+| ++.||++++++++++++..+..+ .++......+...++ .+..+++...++...+.+.|++.++
T Consensus 208 ~~S~SK~~~~~G-lRiG~~v~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g 284 (351)
T PRK14807 208 LRTLSKAFGLAG-LRVGYAVANENILKYLNLVKSPY--NINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPG 284 (351)
T ss_pred EecchHhcccch-hceeeeecCHHHHHHHHHccCCC--CcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999998666 67899999999999888765432 234555444444443 3444556666777788888887777
Q ss_pred eE
Q 013019 430 VL 431 (451)
Q Consensus 430 V~ 431 (451)
+.
T Consensus 285 ~~ 286 (351)
T PRK14807 285 IK 286 (351)
T ss_pred cE
Confidence 53
No 57
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.89 E-value=1.3e-21 Score=201.00 Aligned_cols=214 Identities=13% Similarity=0.167 Sum_probs=164.0
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC-----
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~----- 283 (451)
+|....+++.+|+++|.+..+++++|++++..++.+++++||+|+++.+.|.+.+. .++..|+++..++..
T Consensus 50 ~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~----~~~~~g~~~~~~~~~~~~~~ 125 (370)
T TIGR02539 50 KPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYV----AAERAGLNVKEVPHTGHPEY 125 (370)
T ss_pred chHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHH----HHHHcCCEEEEEecCCcccC
Confidence 45778889999999999999999999999999999999999999999988877653 345678888777653
Q ss_pred --CHHHHHHhhcC------CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEEC
Q 013019 284 --DMEGLEAALNN------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (451)
Q Consensus 284 --D~d~Le~ai~~------~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S 354 (451)
|+++|++++++ .++++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+. .......++|+++.|
T Consensus 126 ~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s 205 (370)
T TIGR02539 126 KVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGS 205 (370)
T ss_pred CcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEee
Confidence 89999999863 248899999999999999999999999999999999999998753 223345678999999
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHHhHhhC--------CCccHHHHHHHHHhhHHHHH---HHHHHHHHHHHHHHH
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG--------GALNPNAAYLIIRGMKTLHL---RVQQQNSTALRMAEI 423 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G--------~~ls~~~a~l~lrgL~tl~~---Rl~~~~~nA~~Lae~ 423 (451)
++|++++++ +.|++++++++++.++.....+. .......+..+...++.... +..+..++++++.+.
T Consensus 206 ~sK~~~~~g--~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~ 283 (370)
T TIGR02539 206 GHKSMAASG--PCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAE 283 (370)
T ss_pred CcccccCCC--CEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998654 47999999999998886554321 11111122222233333222 334455667789999
Q ss_pred HHcCC
Q 013019 424 LEAHP 428 (451)
Q Consensus 424 L~~~p 428 (451)
|++.+
T Consensus 284 L~~~g 288 (370)
T TIGR02539 284 LEDIG 288 (370)
T ss_pred HHhCC
Confidence 98874
No 58
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.89 E-value=7e-22 Score=202.39 Aligned_cols=224 Identities=17% Similarity=0.242 Sum_probs=177.4
Q ss_pred cccCCCchhHHHHHHHHHhhhC-C-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEE
Q 013019 203 EYGRYGNPTTVVVEEKMSALEG-A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (451)
Q Consensus 203 ~Y~R~~npt~~~Lee~LA~l~g-a-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~ 279 (451)
.+.||++|...+|++++++.+| . .+.|+.++|+ +.|..++++++.+||.|++..|+|+... ..++..|.++..
T Consensus 50 ~~~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~----~~a~~~g~~~~~ 125 (356)
T COG0079 50 KLNRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYE----IAAQLAGAEVVK 125 (356)
T ss_pred hhccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHH----HHHHhcCCeEEE
Confidence 5889999999999999999999 4 4677778888 8999999999999999999999998644 345567877777
Q ss_pred eCC----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc--CCEEEEecCCCCCCcccccc----CCCc
Q 013019 280 IDP----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQKALS----LGAD 349 (451)
Q Consensus 280 vd~----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~--g~~lVVD~tfa~~~~~~pl~----~GaD 349 (451)
++. .|++.+.+++++ ++++||++|||||||...+.++|.+++... +.+||+||+|........+. ...-
T Consensus 126 v~~~~~~~d~~~~~~~~~~-~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nl 204 (356)
T COG0079 126 VPLKEFRLDLDAILAAIRD-KTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNL 204 (356)
T ss_pred ecccccccCHHHHHHhhhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCE
Confidence 665 578899988887 499999999999999999988888887754 88999999987654422221 2224
Q ss_pred EEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHH-HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCC
Q 013019 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNA-AYLIIRGMKTLHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 350 iVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~-a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
+|+.||||.++..| ++.||+++++++++.+++.+..+..+..... +..+++.-+.+...+++..+.++++.+.|++++
T Consensus 205 ivlRTfSKa~gLAG-lRlGy~ia~~~~i~~l~~vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~ 283 (356)
T COG0079 205 IVLRTFSKAFGLAG-LRVGYAIANPELIAALNKVRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG 283 (356)
T ss_pred EEEEecHHhhhcch-hceeeccCCHHHHHHHHHhcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 89999999999887 7899999999999999999988754332222 222233335667778888889999999999987
Q ss_pred CeEEE
Q 013019 429 KVLLL 433 (451)
Q Consensus 429 ~V~~V 433 (451)
+..|
T Consensus 284 -~~~v 287 (356)
T COG0079 284 -LFGV 287 (356)
T ss_pred -CCee
Confidence 5443
No 59
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.89 E-value=2.9e-21 Score=199.64 Aligned_cols=215 Identities=16% Similarity=0.205 Sum_probs=162.6
Q ss_pred hhHHHHHHHHHhhhCC----CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC--
Q 013019 210 PTTVVVEEKMSALEGA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~ga----e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-- 282 (451)
+.++.+++.+++..|. ++.+++++|. +++..++.+++++||+|++++|.|..... .++..|+++..++.
T Consensus 69 ~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~~~~ 144 (389)
T PRK05957 69 PLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM----AITMAGCQPILVPTDD 144 (389)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH----HHHhcCCEEEEeecCC
Confidence 4567788888888774 4456666555 89988888899999999999999987543 23456888777643
Q ss_pred ---CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-----ccc----cCC
Q 013019 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL----SLG 347 (451)
Q Consensus 283 ---~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~-----~pl----~~G 347 (451)
.|+++++++++++ +++|++.+|+||||.+.+ +++|+++|+++|+++|+|++|...... .+. ...
T Consensus 145 ~~~~d~~~l~~~i~~~-~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 223 (389)
T PRK05957 145 NYQLQPEAIEQAITPK-TRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGN 223 (389)
T ss_pred CCCcCHHHHHHhcCcC-ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccC
Confidence 4789999999874 999999999999999987 888999999999999999998643221 111 112
Q ss_pred CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHH
Q 013019 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAEI 423 (451)
Q Consensus 348 aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~----tl~~Rl~~~~~nA~~Lae~ 423 (451)
..+++.|+||.++.+| .+.|++++++++++++.......+.+.+......+...++ .+...+++..++.+.+.+.
T Consensus 224 ~~i~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~ 302 (389)
T PRK05957 224 HTISLYSLSKAYGFAS-WRIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKS 302 (389)
T ss_pred cEEEEecchhhccCcc-ceeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 3588999999998777 5789999999999999887766655555555555444443 2444456667778888899
Q ss_pred HHcCCCe
Q 013019 424 LEAHPKV 430 (451)
Q Consensus 424 L~~~p~V 430 (451)
|++++++
T Consensus 303 L~~~~~~ 309 (389)
T PRK05957 303 LGQLQDR 309 (389)
T ss_pred HHhcCCC
Confidence 9877654
No 60
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.88 E-value=4e-21 Score=200.39 Aligned_cols=215 Identities=15% Similarity=0.162 Sum_probs=157.5
Q ss_pred CCchhHHHHHHHHHhhh----C---C--CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE
Q 013019 207 YGNPTTVVVEEKMSALE----G---A--ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~----g---a--e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~ 276 (451)
|+......|++.+++++ | . ++.|++++|+ +++..++.+++++||+|++++|.|..... .++..|.+
T Consensus 78 Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~----~~~~~g~~ 153 (410)
T PRK06290 78 YADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGT----HTKYYGGE 153 (410)
T ss_pred CCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHH----HHHHcCCE
Confidence 44445667788888764 3 2 2357777777 89999999999999999999999988654 34456777
Q ss_pred EEEeCC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-c--c
Q 013019 277 ATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-K--A 343 (451)
Q Consensus 277 v~~vd~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~-~--p 343 (451)
+..++. .|++++++++.+ ++++|++++|+||||.+++ +++|.++|+++|++||+|++|...... . +
T Consensus 154 v~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s 232 (410)
T PRK06290 154 VYNLPLLEENNFLPDLDSIPKDIKE-KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLS 232 (410)
T ss_pred EEEEecCCCcCCcCCHHHHHHhhcc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcC
Confidence 666542 278888888876 4999999999999999998 578888899999999999998753211 1 1
Q ss_pred ---c--cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHH
Q 013019 344 ---L--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNS 415 (451)
Q Consensus 344 ---l--~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~ 415 (451)
+ ....+|+++|+||.++.+| ++.||+++++++++.++..+..+....+.....++...| +.+....++..+
T Consensus 233 ~~~~~~~~~~~I~i~SfSK~~g~~G-lRiG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~ 311 (410)
T PRK06290 233 FLSVPGAKEVGVEIHSLSKAYNMTG-WRLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSR 311 (410)
T ss_pred hhcCCCccccEEEEeechhhcCCch-hheEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHH
Confidence 1 1135699999999998776 678999999999999887766554443333333333333 334444555667
Q ss_pred HHHHHHHHHHcC
Q 013019 416 TALRMAEILEAH 427 (451)
Q Consensus 416 nA~~Lae~L~~~ 427 (451)
+...+.+.|+++
T Consensus 312 ~~~~l~~~L~~~ 323 (410)
T PRK06290 312 RLDKLVKILNEV 323 (410)
T ss_pred HHHHHHHHHHhC
Confidence 788888888876
No 61
>PLN02721 threonine aldolase
Probab=99.88 E-value=4.2e-21 Score=194.18 Aligned_cols=221 Identities=20% Similarity=0.273 Sum_probs=166.5
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc-CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~-~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
+.+|...+||++|++++|.+..+++++|++++..++.++++ +||+|++++++|...+... ..+...|+++.+++.
T Consensus 37 ~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~ 115 (353)
T PLN02721 37 GYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENG-GISTLGGVHPRTVKNNED 115 (353)
T ss_pred CCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHccCCCCeEEEcCccceehhccc-chhhhcCceeEecCCCcC
Confidence 34677899999999999998899999999888888888787 9999999999986554310 134456888777652
Q ss_pred --CCHHHHHHhhcC------CCeEEEEEeCC-CCCcccccc---HHHHHHHHHhcCCEEEEecCCCCC------Cccccc
Q 013019 283 --ADMEGLEAALNN------NNVSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP------LNQKAL 344 (451)
Q Consensus 283 --~D~d~Le~ai~~------~~tklV~lesP-sNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~------~~~~pl 344 (451)
.|++++++++++ .++++|+++++ +||+|.+.| +++|.++|+++|+++|+|+++... .....+
T Consensus 116 ~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~ 195 (353)
T PLN02721 116 GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRL 195 (353)
T ss_pred CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHH
Confidence 479999999972 24899999885 678999876 789999999999999999986422 111222
Q ss_pred cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccH--HHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 013019 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP--NAAYLIIRGMKTLHLRVQQQNSTALRMAE 422 (451)
Q Consensus 345 ~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~--~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae 422 (451)
..++|.++.|+||+++++ .||++++++++++.+...+...+..+.. ..+...+.+++....++++..++++.+.+
T Consensus 196 ~~~~d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 272 (353)
T PLN02721 196 VKAADSVSVCLSKGLGAP---VGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAE 272 (353)
T ss_pred hhhCCEEEEecccccCCc---eeeEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 337899999999999875 3566788999998887776655544322 22334445666666667777788889999
Q ss_pred HHHcCCCeE
Q 013019 423 ILEAHPKVL 431 (451)
Q Consensus 423 ~L~~~p~V~ 431 (451)
.|++++++.
T Consensus 273 ~L~~~~~~~ 281 (353)
T PLN02721 273 GLNQIKGLR 281 (353)
T ss_pred HHHhCCCcE
Confidence 999888764
No 62
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.88 E-value=4e-21 Score=199.10 Aligned_cols=212 Identities=13% Similarity=0.115 Sum_probs=154.7
Q ss_pred hhHHHHHHHHHhhhC------C-C-cEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 210 PTTVVVEEKMSALEG------A-E-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 210 pt~~~Lee~LA~l~g------a-e-~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
+....|++.|+++++ . . +.+++++|+ +++..++.+++++||+|++++|+|..... .+...|+++..+
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~----~~~~~G~~~~~v 144 (399)
T PRK07681 69 SGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYET----GIQMAGATSYYM 144 (399)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHH----HHHhcCCEEEEE
Confidence 344567777776653 1 2 456666665 89999999999999999999999988653 345567777665
Q ss_pred CC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc----c-cc
Q 013019 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A-LS 345 (451)
Q Consensus 281 d~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~----p-l~ 345 (451)
+. .|++++++++.+ ++++|++++|+||||.+++ +++|+++|+++|++||+|++|....... + ..
T Consensus 145 ~~~~~~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~ 223 (399)
T PRK07681 145 PLKKENDFLPDLELIPEEIAD-KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLS 223 (399)
T ss_pred ecCCCCCCcCCHHHHHHhccc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhh
Confidence 42 268889888876 4999999999999999997 7788889999999999999987432111 1 11
Q ss_pred ----CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh----HHHHHHHHHHHHHH
Q 013019 346 ----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTA 417 (451)
Q Consensus 346 ----~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL----~tl~~Rl~~~~~nA 417 (451)
....|++.|+||.++.+| ++.||++++++++++++..+.......+......+...+ +.+....+...++.
T Consensus 224 ~~~~~~~~i~~~S~SK~~~~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 302 (399)
T PRK07681 224 VPGAKEVGVEINSLSKSYSLAG-SRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERR 302 (399)
T ss_pred CCCCcccEEEEeecccccCCcc-ceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 123588999999998776 678999999999999988776555455555444444333 33444445556777
Q ss_pred HHHHHHHHcC
Q 013019 418 LRMAEILEAH 427 (451)
Q Consensus 418 ~~Lae~L~~~ 427 (451)
..+.+.|+++
T Consensus 303 ~~l~~~L~~~ 312 (399)
T PRK07681 303 DTLVDGFRTF 312 (399)
T ss_pred HHHHHHHHHC
Confidence 7888888876
No 63
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.88 E-value=5.4e-21 Score=192.85 Aligned_cols=212 Identities=21% Similarity=0.259 Sum_probs=167.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHH
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~ 287 (451)
.++..+.+++.+++++|.++.+++++|++++..++.+++++||+|+++++.|...... +...|+++..++..|.++
T Consensus 44 ~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~ 119 (349)
T cd06454 44 TSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDG----IRLSGAKKRIFKHNDMED 119 (349)
T ss_pred CchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHHH----HHHcCCceEEecCCCHHH
Confidence 4688899999999999998899999999999988889999999999999998876533 345688888777778888
Q ss_pred HHHhhcC----CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc---------ccccCCCcEEEEC
Q 013019 288 LEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLVLHS 354 (451)
Q Consensus 288 Le~ai~~----~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~---------~pl~~GaDiVv~S 354 (451)
+++++++ .++++|++++|+||+|...|+++|.++|+++|+++|+|++++.+... .....+.|+++.|
T Consensus 120 le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s 199 (349)
T cd06454 120 LEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGT 199 (349)
T ss_pred HHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEee
Confidence 8888864 34789999999999999999999999999999999999998643211 1124578999999
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHHhHh--hCCCccHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--~G~~ls~~~a~l~lrgL~tl---~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
++|.+++. +|+++++++++++++..... .+..+++.....+...++.+ ..+.++..++++.+.+.|+++
T Consensus 200 ~sK~~~~~----gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 273 (349)
T cd06454 200 LGKAFGAV----GGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL 273 (349)
T ss_pred chhhhccc----CCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc
Confidence 99999863 58888898888887765432 23345565555555555543 445667778888888888775
No 64
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.88 E-value=9.1e-21 Score=195.22 Aligned_cols=212 Identities=20% Similarity=0.178 Sum_probs=159.7
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~L 288 (451)
.+...+||++||+++|.+++++++||++|+..++.+++++||+|+++++.|.+....+ .. .+.....+...|+++|
T Consensus 82 ~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~-~~---~~~~~~~~~~~d~~~l 157 (393)
T TIGR01822 82 QDIHKELEAKIAAFLGTEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGV-RL---CKAKRYRYANNDMADL 157 (393)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHH-Hh---cCCceEEeCCCCHHHH
Confidence 5667899999999999999999999999999999999999999999999999866443 22 2333333445788999
Q ss_pred HHhhcC---C--CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc-------cc--cCCCcEEEEC
Q 013019 289 EAALNN---N--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-------AL--SLGADLVLHS 354 (451)
Q Consensus 289 e~ai~~---~--~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~-------pl--~~GaDiVv~S 354 (451)
++++++ . ++++|++++++||+|.+.|+++|.++|++||+++|+|++++.+.... .. ..++|+++.|
T Consensus 158 ~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s 237 (393)
T TIGR01822 158 EAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGT 237 (393)
T ss_pred HHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEE
Confidence 988874 1 48999999999999999999999999999999999999986443211 11 2257899999
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHHhH--hhCCCccHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--~~G~~ls~~~a~l~lrgL~tl---~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+||+++|. ++|++++++++++.++.... .++....+.....++..++.+ ....++..++.+.+.+.|++.
T Consensus 238 ~sK~l~g~---r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (393)
T TIGR01822 238 LGKALGGA---SGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA 312 (393)
T ss_pred ChHHhhCC---CcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 99999875 48999999999988876432 223333444333333444333 334556677778888888764
No 65
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.88 E-value=8e-21 Score=195.45 Aligned_cols=217 Identities=16% Similarity=0.214 Sum_probs=156.0
Q ss_pred cCCCchh-HHHHHHHHHhhh----CC----CcEEEeCCH-HHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCC
Q 013019 205 GRYGNPT-TVVVEEKMSALE----GA----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (451)
Q Consensus 205 ~R~~npt-~~~Lee~LA~l~----ga----e~~vv~sSG-~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~G 274 (451)
.+|+.+. ...|++.+++++ |. ++.+++++| ++++..++..++++||+|++++|+|..... .++..|
T Consensus 61 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~----~~~~~G 136 (383)
T TIGR03540 61 HRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRI----GTLFAG 136 (383)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHH----HHHhcC
Confidence 4455443 456777777764 32 335666655 599999999999999999999999988653 344567
Q ss_pred cEEEEeCC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc---
Q 013019 275 ITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (451)
Q Consensus 275 i~v~~vd~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~--- 341 (451)
.++..++. .|++++++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 137 ~~v~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~ 215 (383)
T TIGR03540 137 GEPYEMPLKEENGFLPDFDAIPEDIAK-KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYK 215 (383)
T ss_pred CEEEEEecCcccCCccCHHHHHhhccc-cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCC
Confidence 77665542 268899888876 4999999999999999998 688999999999999999998643211
Q ss_pred ----cccc--CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh----HHHHHHHH
Q 013019 342 ----KALS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQ 411 (451)
Q Consensus 342 ----~pl~--~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL----~tl~~Rl~ 411 (451)
..+. ....+++.|+||.++.+| ++.||+++++++++++...+...+...+......+...+ +.+....+
T Consensus 216 ~~~~~~~~~~~~~~i~~~SfSK~~g~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 294 (383)
T TIGR03540 216 APSFLEVDGAKDVGIEFHSLSKTYNMTG-WRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRK 294 (383)
T ss_pred CcCcccCCCcccCEEEEEecccccCCcc-ceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHH
Confidence 1111 123578899999998666 678999999999998887765554444443333333333 33444455
Q ss_pred HHHHHHHHHHHHHHcC
Q 013019 412 QQNSTALRMAEILEAH 427 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~~ 427 (451)
+..++...+.+.|+++
T Consensus 295 ~~~~~~~~~~~~L~~~ 310 (383)
T TIGR03540 295 IYQRRRDLLLEALKKI 310 (383)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 6667788888999886
No 66
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.88 E-value=8.5e-21 Score=195.72 Aligned_cols=220 Identities=11% Similarity=0.143 Sum_probs=157.8
Q ss_pred cCCCchh-HHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc
Q 013019 205 GRYGNPT-TVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (451)
Q Consensus 205 ~R~~npt-~~~Lee~LA~l~----g----ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi 275 (451)
.+|+++. ...|++.+++++ | .++.++++++++|+..++.+++++||+|++++|+|......+ ...|.
T Consensus 60 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~----~~~g~ 135 (384)
T PRK06348 60 TRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQI----EMVGG 135 (384)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHH----HHcCC
Confidence 4455544 356888888766 2 244555555559999999999999999999999999866444 34465
Q ss_pred EEEEeC-----C--CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc---
Q 013019 276 TATVID-----P--ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK--- 342 (451)
Q Consensus 276 ~v~~vd-----~--~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~--- 342 (451)
++..++ . .|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|++||+|++|.......
T Consensus 136 ~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 214 (384)
T PRK06348 136 KPIILETYEEDGFQINVKKLEALITS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFV 214 (384)
T ss_pred EEEEecCCcCcCCcCCHHHHHHhhCc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCcc
Confidence 555443 1 478999998876 4899999999999999986 6788888999999999999987543211
Q ss_pred c---cc--CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH----HHHHHHHH
Q 013019 343 A---LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQ 413 (451)
Q Consensus 343 p---l~--~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t----l~~Rl~~~ 413 (451)
+ +. .+..+++.|+||.++.+| ++.||++++++++++++..+.....+.+......+...+.. +....+..
T Consensus 215 ~~~~~~~~~~~vi~~~SfSK~~~l~G-lRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 293 (384)
T PRK06348 215 PMATLAGMPERTITFGSFSKDFAMTG-WRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEF 293 (384)
T ss_pred chhhcCCCcCcEEEEecchhccCCcc-ccceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 1 11 234588999999998676 67999999999999888777655445556554444433322 22233445
Q ss_pred HHHHHHHHHHHHcCCCe
Q 013019 414 NSTALRMAEILEAHPKV 430 (451)
Q Consensus 414 ~~nA~~Lae~L~~~p~V 430 (451)
.++.+.+.+.|++.+++
T Consensus 294 ~~r~~~~~~~L~~~~~~ 310 (384)
T PRK06348 294 QKRLEYAYKRIESIPNL 310 (384)
T ss_pred HHHHHHHHHHHhcCCCc
Confidence 56677788888877654
No 67
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.88 E-value=7.4e-21 Score=191.25 Aligned_cols=218 Identities=22% Similarity=0.231 Sum_probs=165.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----C
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A 283 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----~ 283 (451)
+.+..++|++.+++++|.++.+++++|++++..++.+++++||+|+++++.|...+... ......|+++..++. .
T Consensus 30 ~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 108 (338)
T cd06502 30 EDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAG-APEFLSGVKLLPVPGENGKL 108 (338)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCC-cHHHHcCceEEeecCCCCcC
Confidence 56889999999999999778889999999999999999999999999999987654221 112235777777754 5
Q ss_pred CHHHHHHhhcC------CCeEEEEEeCCCCCcc--ccccHHHHHHHHHhcCCEEEEecCCCC------CCccccccCCCc
Q 013019 284 DMEGLEAALNN------NNVSLFFTESPTNPFL--RCVDVKLVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGAD 349 (451)
Q Consensus 284 D~d~Le~ai~~------~~tklV~lesPsNPtG--~v~DL~~IaelA~~~g~~lVVD~tfa~------~~~~~pl~~GaD 349 (451)
|+++|++++++ .++++|++++|+||.+ ...|+++|+++|+++|+++|+|++|.. +.....+..++|
T Consensus 109 d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d 188 (338)
T cd06502 109 TPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVD 188 (338)
T ss_pred CHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCC
Confidence 78999999874 1489999999999844 234678899999999999999998632 111122335789
Q ss_pred EEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCC--CccHHHHHHHHHhhHH--HHHHHHHHHHHHHHHHHHHH
Q 013019 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNAAYLIIRGMKT--LHLRVQQQNSTALRMAEILE 425 (451)
Q Consensus 350 iVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~--~ls~~~a~l~lrgL~t--l~~Rl~~~~~nA~~Lae~L~ 425 (451)
+++.|+||++++++ |++++++++++++++.....+|. ..++..++.++..|+. ...++++..++++++.+.|+
T Consensus 189 ~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~ 265 (338)
T cd06502 189 SVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALE 265 (338)
T ss_pred EEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999775 56677889999998877655543 2445555666666654 44566778888899999998
Q ss_pred cCCC
Q 013019 426 AHPK 429 (451)
Q Consensus 426 ~~p~ 429 (451)
+++.
T Consensus 266 ~~~~ 269 (338)
T cd06502 266 ELGG 269 (338)
T ss_pred hcCC
Confidence 8653
No 68
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.88 E-value=9.1e-21 Score=195.69 Aligned_cols=211 Identities=19% Similarity=0.247 Sum_probs=169.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
.+|...+||+++++++|.+++++++||++|+.+++.++ +++||+||++++.|.++... +...|+++.++|.
T Consensus 31 ~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~----~~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 31 TGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNM----IVLLGATPVMVDVDRDT 106 (379)
T ss_pred CCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHH----HHHcCCEEEEEecCCCc
Confidence 46899999999999999999999999999999999999 89999999999999987643 3456888888763
Q ss_pred --CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc---cccCCCcEEEECCcc
Q 013019 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---ALSLGADLVLHSATK 357 (451)
Q Consensus 283 --~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~---pl~~GaDiVv~S~SK 357 (451)
.|+++++++++++ +++|+ |+|++|.+.|+++|.++|+++|+++|+|++++.+.... ....|.++...+.+|
T Consensus 107 ~~~d~~~l~~~i~~~-tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K 182 (379)
T PRK11658 107 LMVTPEAIEAAITPR-TKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIK 182 (379)
T ss_pred CCcCHHHHHHhcccC-CeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCCCC
Confidence 3789999999874 99987 67889999999999999999999999999987543222 234565555556668
Q ss_pred cCCccccceeEEEEeC-HHHHHHHHHHhHh----------------------hC--CCccHHHHHHHHHhhHHHHHHHHH
Q 013019 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV----------------------LG--GALNPNAAYLIIRGMKTLHLRVQQ 412 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~----------------------~G--~~ls~~~a~l~lrgL~tl~~Rl~~ 412 (451)
.+.+. .||+++++ +++.++++..+.. .| ..++.+.|.+.+..++.++...++
T Consensus 183 ~l~~g---~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~ 259 (379)
T PRK11658 183 NITCA---EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNAR 259 (379)
T ss_pred cCccc---CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHH
Confidence 88664 48888875 6788887764421 11 224566777777888889988999
Q ss_pred HHHHHHHHHHHHHcCCC
Q 013019 413 QNSTALRMAEILEAHPK 429 (451)
Q Consensus 413 ~~~nA~~Lae~L~~~p~ 429 (451)
..++++.+.+.|++.|.
T Consensus 260 r~~~a~~~~~~L~~~~~ 276 (379)
T PRK11658 260 RREIAARYLQALADLPF 276 (379)
T ss_pred HHHHHHHHHHHhcCCCC
Confidence 99999999999988763
No 69
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.88 E-value=5.1e-21 Score=196.58 Aligned_cols=221 Identities=19% Similarity=0.191 Sum_probs=162.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCC---------------eEEEcCCCCcchHHHHHHhhhc
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG---------------HIVTTTDCYRKTRIFIETVLPK 272 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD---------------~VIv~~~~Y~~t~~~l~~~l~~ 272 (451)
..+..+++++++++++|.++++++++|++|+.+++.+++++|| +||++.+.|......+...+..
T Consensus 43 ~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~ 122 (363)
T TIGR01437 43 IKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRL 122 (363)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHh
Confidence 3466888999999999999999999999999999999999998 8888875553221111234455
Q ss_pred CCcEEEEeCC---CCHHHHHHhhcCCCeEEEE-EeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCC
Q 013019 273 MGITATVIDP---ADMEGLEAALNNNNVSLFF-TESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA 348 (451)
Q Consensus 273 ~Gi~v~~vd~---~D~d~Le~ai~~~~tklV~-lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~Ga 348 (451)
.|.++.+++. .|+++++++|+++ |++|+ +++|+||+|.+.|+++|.++||++|+++++|++++..+ .....+|+
T Consensus 123 ~g~~~v~v~~~~~~d~~~le~ai~~~-t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-~~~~~~g~ 200 (363)
T TIGR01437 123 GGGKVVEAGYANECSAEQLEAAITEK-TAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-QKYYRLGA 200 (363)
T ss_pred cCCeEEEEcCCCCCCHHHHHHhcChh-ceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-HHHHHcCC
Confidence 6777777653 5899999999875 88655 68899999999999999999999999999999997433 23456789
Q ss_pred cEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCc--cHHHHHHHHHhhHHH----HHHHHHHHHHHHHHHH
Q 013019 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTL----HLRVQQQNSTALRMAE 422 (451)
Q Consensus 349 DiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~l--s~~~a~l~lrgL~tl----~~Rl~~~~~nA~~Lae 422 (451)
|++++|+||++.|+. +|++++++++++.++......+..+ .......+..+++.+ ..+++++.+++..+.+
T Consensus 201 D~~~~S~~K~l~gp~---~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~ 277 (363)
T TIGR01437 201 DLVIYSGAKAIEGPT---SGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIE 277 (363)
T ss_pred CEEEEeCCcccCCCc---eEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHH
Confidence 999999999998874 8999999888887754332222111 111111111222222 2335556667888999
Q ss_pred HHHcCCCeEEE
Q 013019 423 ILEAHPKVLLL 433 (451)
Q Consensus 423 ~L~~~p~V~~V 433 (451)
.|++.|++...
T Consensus 278 ~L~~i~g~~~~ 288 (363)
T TIGR01437 278 ALNTLKGVSAS 288 (363)
T ss_pred HHhcCCCeEEE
Confidence 99999988654
No 70
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.88 E-value=2e-20 Score=192.78 Aligned_cols=216 Identities=15% Similarity=0.182 Sum_probs=163.0
Q ss_pred hhHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 210 PTTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 210 pt~~~Lee~LA~l~----ga----e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
.....|++.|++++ |. ++.++++++++|+..++.+++++||+|++++|+|..... .++..|+++..++
T Consensus 68 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~~~ 143 (393)
T PRK05764 68 AGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPE----MVKLAGGVPVFVP 143 (393)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCCEEEEEe
Confidence 34577888888876 31 345555666799999999999999999999999987553 3455688777665
Q ss_pred C-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc----c---c
Q 013019 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A---L 344 (451)
Q Consensus 282 ~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~----p---l 344 (451)
. .|++++++++++ ++++|++++|+||||.+.+ +++|.++|++||+++|+|++|+...... + +
T Consensus 144 ~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 222 (393)
T PRK05764 144 TGEENGFKLTVEQLEAAITP-KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASL 222 (393)
T ss_pred cCcccCCcCCHHHHHHhhCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHc
Confidence 3 257899999876 4899999999999999874 7889999999999999999986542211 1 1
Q ss_pred ---cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH----HHHHHHHHHHHHH
Q 013019 345 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 417 (451)
Q Consensus 345 ---~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~----tl~~Rl~~~~~nA 417 (451)
..+.++++.|+||.++.+| .+.|+++++++++++++......+..+++..++.+.+.++ .+....++..++.
T Consensus 223 ~~~~~~~~i~~~s~SK~~~~~G-~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 301 (393)
T PRK05764 223 SPELRDRTITVNGFSKAYAMTG-WRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERR 301 (393)
T ss_pred CCCCcCCEEEEecCcccccCcc-ceeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 1246799999999998776 5789999999999999887766665667777666655553 2333345556777
Q ss_pred HHHHHHHHcCCCeE
Q 013019 418 LRMAEILEAHPKVL 431 (451)
Q Consensus 418 ~~Lae~L~~~p~V~ 431 (451)
..+.+.|++++++.
T Consensus 302 ~~l~~~L~~~~g~~ 315 (393)
T PRK05764 302 DLMVDGLNEIPGLE 315 (393)
T ss_pred HHHHHHHhhCCCCc
Confidence 88889999886653
No 71
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.87 E-value=2.4e-20 Score=191.27 Aligned_cols=214 Identities=17% Similarity=0.210 Sum_probs=153.0
Q ss_pred HHHHHHHHHhhhC----CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-----
Q 013019 212 TVVVEEKMSALEG----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (451)
Q Consensus 212 ~~~Lee~LA~l~g----ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----- 282 (451)
++.+.+.+.+++| .++.+++++|++++..++.+++++||+|++++|+|..... .+...|+++..++.
T Consensus 67 r~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~ 142 (382)
T PRK06108 67 REALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVA----APKILGARVVCVPLDFGGG 142 (382)
T ss_pred HHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHH----HHHHCCCEEEEeeCCCCCC
Confidence 3344444444446 2455555666799999999999999999999999987553 34556887766543
Q ss_pred ---CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc---c-c--cc----C
Q 013019 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---K-A--LS----L 346 (451)
Q Consensus 283 ---~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~---~-p--l~----~ 346 (451)
.|+++|++.+++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... . + .. .
T Consensus 143 ~~~~d~~~l~~~~~~-~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 221 (382)
T PRK06108 143 GWTLDLDRLLAAITP-RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPD 221 (382)
T ss_pred CccCCHHHHHHhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCc
Confidence 368999998876 4899999999999998875 678999999999999999997654221 0 0 11 1
Q ss_pred CCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHH
Q 013019 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAE 422 (451)
Q Consensus 347 GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL----~tl~~Rl~~~~~nA~~Lae 422 (451)
...+++.|+||.++.+| .+.|+++++++++++++..........+...+..+...| +.+....++..++...+.+
T Consensus 222 ~~~i~~~S~SK~~g~~G-~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 300 (382)
T PRK06108 222 DRIIFVNSFSKNWAMTG-WRLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVD 300 (382)
T ss_pred CCEEEEeechhhccCcc-cceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 24588999999997665 578999999999998887654444444555444333333 3344445566677788888
Q ss_pred HHHcCCCeE
Q 013019 423 ILEAHPKVL 431 (451)
Q Consensus 423 ~L~~~p~V~ 431 (451)
.|+++++++
T Consensus 301 ~L~~~~~~~ 309 (382)
T PRK06108 301 ALRALPGVE 309 (382)
T ss_pred HHHhCCCCc
Confidence 898876653
No 72
>PRK07179 hypothetical protein; Provisional
Probab=99.87 E-value=1.3e-20 Score=195.80 Aligned_cols=212 Identities=15% Similarity=0.177 Sum_probs=164.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHH
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~ 287 (451)
+.+...+||++|++++|.+.+++++||++|+..++.++..+||+|+++...|.+.... +...|+++..++..|+++
T Consensus 97 ~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~~d~~~ 172 (407)
T PRK07179 97 DDSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEG----VRAAGAQAHPFRHNDVDH 172 (407)
T ss_pred CchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHH----HHHCCCeEEEecCCCHHH
Confidence 4467889999999999999999999999999999999999999999988888765432 344577777777789999
Q ss_pred HHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-------ccccc--CCCcEEEECCccc
Q 013019 288 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------QKALS--LGADLVLHSATKF 358 (451)
Q Consensus 288 Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-------~~pl~--~GaDiVv~S~SK~ 358 (451)
|+++++++++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+.. ...+. .++|+++.|++|.
T Consensus 173 l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~ 252 (407)
T PRK07179 173 LRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKA 252 (407)
T ss_pred HHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHh
Confidence 99999763478999999999999999999999999999999999999864321 11111 2469999999999
Q ss_pred CCccccceeEEEEeCHHHHHHHHHHhH--hhCCCccHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 359 IGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 359 l~G~gdv~gG~Iv~~~eli~~lr~~~~--~~G~~ls~~~a~l~---lrgL~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+++. +|++++++++++.++.... .++.+..+..+..+ ++.++....+.++..++...+.+.|++.
T Consensus 253 ~g~~----~G~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~ 322 (407)
T PRK07179 253 FAGR----AGIITCPRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL 322 (407)
T ss_pred hhcc----CeEEEeCHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 9853 7999999888877765432 23444444443332 2333334456677888888888888875
No 73
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.87 E-value=1.2e-20 Score=194.81 Aligned_cols=217 Identities=13% Similarity=0.176 Sum_probs=160.2
Q ss_pred CchhHHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEE
Q 013019 208 GNPTTVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~----g----ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~ 279 (451)
+.+....|++++++++ | .++.+++++|++|+..++.+++++||+|++++|+|..... .+...|+++..
T Consensus 68 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~----~~~~~g~~~~~ 143 (391)
T PRK08361 68 PNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVE----DAKIAEAKPIR 143 (391)
T ss_pred CCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH----HHHHcCCEEEE
Confidence 3445677888888876 3 2455666666799999999999999999999999988653 33446777665
Q ss_pred eCC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----cc--
Q 013019 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA-- 343 (451)
Q Consensus 280 vd~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~p-- 343 (451)
++. .|+++++++++++ +++|++++|+||||.+.+ +++|.++|+++++++|+|++|...... .+
T Consensus 144 v~~~~~~~~~~d~~~l~~~i~~~-~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 222 (391)
T PRK08361 144 IPLREENEFQPDPDELLELITKR-TRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMI 222 (391)
T ss_pred EecCCccCCCCCHHHHHHhcccc-cEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHh
Confidence 532 4789999999874 899999999999999998 888999999999999999998653211 11
Q ss_pred -ccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH------HHHHHHHHHHHH
Q 013019 344 -LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNST 416 (451)
Q Consensus 344 -l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~------tl~~Rl~~~~~n 416 (451)
.....++++.|+||.++.+| ++.|++++++++++++...........+.+...++...++ .+....++..++
T Consensus 223 ~~~~~~~i~~~s~SK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 301 (391)
T PRK08361 223 KYAPDNTILANSFSKTFAMTG-WRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNER 301 (391)
T ss_pred hcCCCCEEEEecCchhcCCcH-hhhhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHH
Confidence 11235688999999998776 6789999999999988776654444455555444444332 233444555667
Q ss_pred HHHHHHHHHcCCCe
Q 013019 417 ALRMAEILEAHPKV 430 (451)
Q Consensus 417 A~~Lae~L~~~p~V 430 (451)
...+.+.|++.+++
T Consensus 302 ~~~~~~~L~~~~~~ 315 (391)
T PRK08361 302 RKLVLKRLKEMPHI 315 (391)
T ss_pred HHHHHHHHHhCCCC
Confidence 77788899887665
No 74
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.87 E-value=1.4e-20 Score=193.72 Aligned_cols=216 Identities=17% Similarity=0.204 Sum_probs=153.7
Q ss_pred CCCchh-HHHHHHHHHhhh----CC----CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc
Q 013019 206 RYGNPT-TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (451)
Q Consensus 206 R~~npt-~~~Lee~LA~l~----ga----e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi 275 (451)
+|+.+. ...|++++++++ |. ++.+++++|+ +++..++.+++++||+|++++|+|..... .++..|.
T Consensus 64 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~----~~~~~g~ 139 (385)
T PRK09276 64 QYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKI----GTIFAGG 139 (385)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHH----HHHHcCC
Confidence 444433 456777777765 42 3346666665 99999999999999999999999987543 3345577
Q ss_pred EEEEeCC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----
Q 013019 276 TATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (451)
Q Consensus 276 ~v~~vd~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~---- 341 (451)
++..++. .|++++++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 140 ~~~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 218 (385)
T PRK09276 140 EPYFMPLKEENGFLPDLDAIPEDVAK-KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKP 218 (385)
T ss_pred EEEEEecCCCCCCcCCHHHHHHhccc-cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCC
Confidence 6655432 267888888876 4999999999999999997 578888899999999999998643211
Q ss_pred cc---cc--CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH----HHHHHHHH
Q 013019 342 KA---LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQ 412 (451)
Q Consensus 342 ~p---l~--~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~----tl~~Rl~~ 412 (451)
.+ +. .+..+++.|+||.++.+| ++.||++++++++++++..+.......+...+..+...++ .+....++
T Consensus 219 ~~~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 297 (385)
T PRK09276 219 PSFLEVPGAKDVGIEFHSLSKTYNMTG-WRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKI 297 (385)
T ss_pred CChhccCCCcCCEEEEecchhhcCCcc-hhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 11 11 134588999999998776 6789999999999998877665554444444333333332 23333455
Q ss_pred HHHHHHHHHHHHHcC
Q 013019 413 QNSTALRMAEILEAH 427 (451)
Q Consensus 413 ~~~nA~~Lae~L~~~ 427 (451)
..++...+.+.|+++
T Consensus 298 ~~~~~~~l~~~L~~~ 312 (385)
T PRK09276 298 YQERRDILVEGLRKL 312 (385)
T ss_pred HHHHHHHHHHHHHhC
Confidence 566777888888875
No 75
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=1.2e-20 Score=194.82 Aligned_cols=218 Identities=13% Similarity=0.152 Sum_probs=162.4
Q ss_pred ccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
+.+|+++....|+++|++++|. .+.|++++|+ +++..++.+++++||+|++++|.|+... ..++..|+++..++
T Consensus 80 ~~~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~----~~~~~~g~~~~~v~ 155 (380)
T PLN03026 80 PYVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYV----FDAAVNGAEVIKVP 155 (380)
T ss_pred hccCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEee
Confidence 3557777788999999999986 3556667766 8999999899999999999999997433 33455688877664
Q ss_pred C-----CCHHHHHHhh-cCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc-cc---c-cCCCcE
Q 013019 282 P-----ADMEGLEAAL-NNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KA---L-SLGADL 350 (451)
Q Consensus 282 ~-----~D~d~Le~ai-~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-~p---l-~~GaDi 350 (451)
. .|+++|++++ ++ ++++|++++|+||||.+.+.+++.++++.. +++|+|++|...... .. + .....+
T Consensus 156 ~~~~~~~d~~~l~~~~~~~-~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~vi 233 (380)
T PLN03026 156 RTPDFSLDVPRIVEAVETH-KPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLI 233 (380)
T ss_pred cCCCCCcCHHHHHHHHhcc-CCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEE
Confidence 3 3689999988 44 599999999999999999999999999865 899999998643211 11 1 123468
Q ss_pred EEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 351 Vv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
++.|+||.++.+| ++.||++++++++++++..+..++ ++......+...| +.+....+...++...+.+.|+++
T Consensus 234 v~~SfSK~~glaG-lRiGy~~~~~~~i~~l~~~~~~~~--~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~ 310 (380)
T PLN03026 234 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQPYN--VSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEV 310 (380)
T ss_pred EEecchHhhcCcc-ccceeeecCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999998776 678999999999998887765443 4444444444444 333333455566777888889887
Q ss_pred CCe
Q 013019 428 PKV 430 (451)
Q Consensus 428 p~V 430 (451)
+.+
T Consensus 311 ~~~ 313 (380)
T PLN03026 311 PFL 313 (380)
T ss_pred CCC
Confidence 654
No 76
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.87 E-value=2e-20 Score=190.55 Aligned_cols=216 Identities=19% Similarity=0.223 Sum_probs=157.5
Q ss_pred CCCchh-HHHHHHHHHhhh----CC---Cc-EEEeCCHH-HHHHHHHHHHccCC---CeEEEcCCCCcchHHHHHHhhhc
Q 013019 206 RYGNPT-TVVVEEKMSALE----GA---ES-TVIMASGM-SASTVMLLALVPAG---GHIVTTTDCYRKTRIFIETVLPK 272 (451)
Q Consensus 206 R~~npt-~~~Lee~LA~l~----ga---e~-~vv~sSG~-aAi~~al~all~~G---D~VIv~~~~Y~~t~~~l~~~l~~ 272 (451)
+|+.|. ...|++.+++++ |. .+ .+++++|+ +++..++.+++++| |+|++++|+|...... ++.
T Consensus 31 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~----~~~ 106 (350)
T TIGR03537 31 QYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERG----ALF 106 (350)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHH----HHh
Confidence 345443 456777777764 52 22 56667666 89999999999887 6999999999986643 455
Q ss_pred CCcEEEEeCC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc
Q 013019 273 MGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK 342 (451)
Q Consensus 273 ~Gi~v~~vd~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~ 342 (451)
.|+++..++. .|++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+......
T Consensus 107 ~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~ 185 (350)
T TIGR03537 107 AGGEPTAVKLKKEDGFLLRLEKVEKSILE-ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGE 185 (350)
T ss_pred cCCEEEEcccCcccCCccCHHHHHHhhhh-ccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCC
Confidence 6777776643 278999998877 4999999999999999998 8899999999999999999987542221
Q ss_pred c----c--cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHH
Q 013019 343 A----L--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQ 413 (451)
Q Consensus 343 p----l--~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~ 413 (451)
+ . .....+++.|+||.++.+| +++|+++++++++++++..+..++...+.....++...+ +.+..+.++.
T Consensus 186 ~~~~~~~~~~~~~i~~~s~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l 264 (350)
T TIGR03537 186 PPHSALEVGIENVLAFHSLSKRSGMTG-YRSGFVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNHVLERRKIF 264 (350)
T ss_pred CCCchhhcCcCCEEEEeecccccCCcc-ccceeeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 1 1 1223488999999998776 678999999999999988776666555544333332222 3344445566
Q ss_pred HHHHHHHHHHHHcC
Q 013019 414 NSTALRMAEILEAH 427 (451)
Q Consensus 414 ~~nA~~Lae~L~~~ 427 (451)
.++...+.+.|+++
T Consensus 265 ~~~~~~~~~~l~~~ 278 (350)
T TIGR03537 265 KRKRDLFIEFFNKV 278 (350)
T ss_pred HHHHHHHHHHHHHC
Confidence 67777788888775
No 77
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=3.8e-21 Score=196.23 Aligned_cols=222 Identities=17% Similarity=0.238 Sum_probs=163.3
Q ss_pred cccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEE
Q 013019 203 EYGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (451)
Q Consensus 203 ~Y~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~ 279 (451)
..+||+++...+|++++++.+|. .+.|++++|+ +++..++.+++++| |+|++++|.|.... ..++..|+++..
T Consensus 50 ~~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~----~~~~~~G~~~~~ 125 (351)
T PRK01688 50 TLNRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS----VSAETIGVEIRT 125 (351)
T ss_pred ccccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHH----HHHHHcCCEEEE
Confidence 36788999889999999999996 3456666665 89999999999997 89999999997643 345567887776
Q ss_pred eCC-----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHh--cCCEEEEecCCCCCCccc-c---c-cCC
Q 013019 280 IDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQK-A---L-SLG 347 (451)
Q Consensus 280 vd~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~--~g~~lVVD~tfa~~~~~~-p---l-~~G 347 (451)
++. .|++++++++ + ++++|++++|+||||.+.+.++|.++++. .+++||+||+|....... . + ...
T Consensus 126 v~~~~~~~~d~~~l~~~~-~-~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~ 203 (351)
T PRK01688 126 VPTLDNWQLDLPAIADNL-D-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYP 203 (351)
T ss_pred eecCCCCCCCHHHHHHhc-c-CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCC
Confidence 643 3688998888 3 48999999999999999987777776653 268999999986543211 1 1 123
Q ss_pred CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHH
Q 013019 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG-----MKTLHLRVQQQNSTALRMAE 422 (451)
Q Consensus 348 aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrg-----L~tl~~Rl~~~~~nA~~Lae 422 (451)
.-+++.|+||.++.+| ++.|++++++++++.+++.+..+. ++...+..+... .+.+..+++...++.+.+.+
T Consensus 204 n~iv~rSfSK~~glaG-lRiGy~i~~~~~i~~l~~~~~~~~--v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~ 280 (351)
T PRK01688 204 HLVILRTLSKAFALAG-LRCGFTLANEEVINLLLKVIAPYP--LSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIA 280 (351)
T ss_pred CEEEEecchHhhcCHH-HHHhHHhCCHHHHHHHHhccCCCC--CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999998666 678999999999999887665443 233222222222 34455666777778889999
Q ss_pred HHHcCCCeEEE
Q 013019 423 ILEAHPKVLLL 433 (451)
Q Consensus 423 ~L~~~p~V~~V 433 (451)
.|++++++..+
T Consensus 281 ~L~~~~~~~~~ 291 (351)
T PRK01688 281 ALKEIPCVEQV 291 (351)
T ss_pred HHHhCCCCCeE
Confidence 99988766433
No 78
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.87 E-value=2.9e-20 Score=191.54 Aligned_cols=213 Identities=24% Similarity=0.274 Sum_probs=170.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
.++....||+.+++++|.+++++++||++|+..++.++ +++||+|+++.+.|.++.. .+...|+++.++|.
T Consensus 27 ~g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~----~~~~~G~~~~~~~~~~~~ 102 (380)
T TIGR03588 27 QGPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATAN----CALYCGAKVDFVDIDPDT 102 (380)
T ss_pred CChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH----HHHHcCCEEEEEecCCCc
Confidence 35788999999999999999999999999999999998 8999999999999987653 34567888888764
Q ss_pred --CCHHHHHHhhc----CCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCC----cEEE
Q 013019 283 --ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA----DLVL 352 (451)
Q Consensus 283 --~D~d~Le~ai~----~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~Ga----DiVv 352 (451)
.|+++++++++ + ++++|++ +|++|...|+++|.++|+++|++||+|++++.+...+....|. |+++
T Consensus 103 ~~~d~~~l~~~i~~~~~~-~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~ 178 (380)
T TIGR03588 103 GNIDEDALEKKLAAAKGK-LPKAIVP---VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATV 178 (380)
T ss_pred CCcCHHHHHHHhhcccCC-CceEEEE---eCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEE
Confidence 37899999998 4 4899885 6678999999999999999999999999987653222223344 9999
Q ss_pred ECCc--ccCCccccceeEEEEeC-HHHHHHHHHHhHh-----------------------hC--CCccHHHHHHHHHhhH
Q 013019 353 HSAT--KFIGGHNDVLAGSISGS-GKLVTQIRNLHHV-----------------------LG--GALNPNAAYLIIRGMK 404 (451)
Q Consensus 353 ~S~S--K~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~-----------------------~G--~~ls~~~a~l~lrgL~ 404 (451)
.|++ |+++... ||+++.+ +++.++++..+.. .| ..++...+.+.+..|+
T Consensus 179 ~S~~~~K~~~~~~---GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~ 255 (380)
T TIGR03588 179 FSFHPVKIITTAE---GGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLK 255 (380)
T ss_pred EecCCCCcccccC---ceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHH
Confidence 9987 8887643 7877764 6677777654320 11 2346666777777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 013019 405 TLHLRVQQQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 405 tl~~Rl~~~~~nA~~Lae~L~~~p~V~ 431 (451)
.++.++++..++++.+.+.|.+.|.+.
T Consensus 256 ~l~~~~~~r~~~~~~~~~~L~~~~~~~ 282 (380)
T TIGR03588 256 KLDRFVAKRREIAARYDRLLKDLPYFT 282 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 999999999999999999999888654
No 79
>PRK12414 putative aminotransferase; Provisional
Probab=99.87 E-value=6e-20 Score=189.53 Aligned_cols=211 Identities=15% Similarity=0.179 Sum_probs=152.2
Q ss_pred hHHHHHHHHHhhhCC-----CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 211 TTVVVEEKMSALEGA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 211 t~~~Lee~LA~l~ga-----e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
.++.+++.+++++|. ++.+++++|++++..++.+++.+||+|++++|.|...... ++..|.++..++.
T Consensus 71 lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~~ 146 (384)
T PRK12414 71 LREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPI----VRLQGATPVAIKLSPE 146 (384)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHH----HHHcCCEEEEEecCcc
Confidence 345566666666675 2466667777999999999999999999999999875533 3345666655542
Q ss_pred ---CCHHHHHHhhcCCCeEEEEEeCCCCCccccc---cHHHHHHHHHhcCCEEEEecCCCCCCcc----cccc-----CC
Q 013019 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS-----LG 347 (451)
Q Consensus 283 ---~D~d~Le~ai~~~~tklV~lesPsNPtG~v~---DL~~IaelA~~~g~~lVVD~tfa~~~~~----~pl~-----~G 347 (451)
.|+++|++++++ ++++|++++|+||||.++ ++++|+++|+++|+++|+|++|...... .++. .+
T Consensus 147 ~~~~d~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~ 225 (384)
T PRK12414 147 DFRVNWDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAE 225 (384)
T ss_pred ccccCHHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccC
Confidence 378999999876 499999999999999986 5788899999999999999998653211 1111 12
Q ss_pred CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH---HHHHHHHHHHHHHHHHHHH
Q 013019 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 348 aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t---l~~Rl~~~~~nA~~Lae~L 424 (451)
..+++.|+||.++.+| ++.||+++++++++.++..........+...+.++...|+. .....+...++...+.+.|
T Consensus 226 ~~i~~~SfSK~~~~pG-lRiG~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L 304 (384)
T PRK12414 226 RSVIVSSFGKSYHVTG-WRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLAREL 304 (384)
T ss_pred cEEEEecccccccCcc-ceEEEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 3489999999998666 67899999999999888876544444444444444443321 2222345567777888888
Q ss_pred HcC
Q 013019 425 EAH 427 (451)
Q Consensus 425 ~~~ 427 (451)
+++
T Consensus 305 ~~~ 307 (384)
T PRK12414 305 AGS 307 (384)
T ss_pred HhC
Confidence 876
No 80
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=1.8e-20 Score=192.34 Aligned_cols=223 Identities=19% Similarity=0.231 Sum_probs=161.3
Q ss_pred ccCCCchhHHHHHHHHHhhhCC-CcEEEeCCH-HHHHHHHHHHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASG-MSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG-~aAi~~al~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
..||++|....|++.|++++|. .+.|++++| ++++..++.+++.+| |+|++++|.|+... ..++..|.++..+
T Consensus 53 ~~~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~----~~~~~~g~~~~~v 128 (364)
T PRK04781 53 TRRYPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYA----VCARLQNAPLVEV 128 (364)
T ss_pred hccCCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEE
Confidence 5678888888999999999986 335666666 589999999999999 79999999887433 2334567777666
Q ss_pred CC--------CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHh--cCCEEEEecCCCCCCccc-c---cc-
Q 013019 281 DP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQK-A---LS- 345 (451)
Q Consensus 281 d~--------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~--~g~~lVVD~tfa~~~~~~-p---l~- 345 (451)
+. .|++++++++...++++|++++|+||||.+.+.+++.++++. +++++|+||+|....... + .+
T Consensus 129 ~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~ 208 (364)
T PRK04781 129 PLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLAR 208 (364)
T ss_pred ecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhh
Confidence 43 256777555433358999999999999999998888888764 478999999987543211 1 11
Q ss_pred CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh-----HHHHHHHHHHHHHHHHH
Q 013019 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRM 420 (451)
Q Consensus 346 ~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL-----~tl~~Rl~~~~~nA~~L 420 (451)
...-+++.|+||.++.+| ++.||+++++++++.+++.+..++. +.....++...| ..+..++++..++.+.+
T Consensus 209 ~~~vi~~~SfSK~~gl~G-lRvGy~v~~~~l~~~l~~~~~~~~~--~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l 285 (364)
T PRK04781 209 YDNLAVLRTLSKAHALAA-ARIGSLIANAELIAVLRRCQAPYPV--PTPCAALAEQALSAPALAVTARRVAEVRAERERL 285 (364)
T ss_pred CCCEEEEecChhhccccc-ceeeeeeCCHHHHHHHHhccCCCCC--CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 123588999999998666 6789999999999999887765543 333323323333 34445566677788889
Q ss_pred HHHHHcCCCeEEE
Q 013019 421 AEILEAHPKVLLL 433 (451)
Q Consensus 421 ae~L~~~p~V~~V 433 (451)
.+.|+++|++..+
T Consensus 286 ~~~L~~~~~~~~~ 298 (364)
T PRK04781 286 HAALAQLPGVRRV 298 (364)
T ss_pred HHHHHhCCCCCeE
Confidence 9999988765433
No 81
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=1.7e-20 Score=191.13 Aligned_cols=219 Identities=18% Similarity=0.282 Sum_probs=163.1
Q ss_pred ccCCCchhHHHHHHHHHhhhCCC--cEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 204 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~gae--~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
+.+|+.+...+|++.|++++|.. +.+++++|+ +++..++.+++++||+|++++|.|.... ..+...|+++..+
T Consensus 57 ~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~i 132 (356)
T PRK04870 57 LNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYR----MSAKLAGLEFVGV 132 (356)
T ss_pred cccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHH----HHHHHcCCEEEEe
Confidence 34555666788999999999863 357777776 7888888889999999999999988644 3456678887776
Q ss_pred CC-----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc---cc-cCCCcEE
Q 013019 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---AL-SLGADLV 351 (451)
Q Consensus 281 d~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~---pl-~~GaDiV 351 (451)
+. .|+++|++++.+.++++|++++|+||||.+.+.+++.++++..++++|+|++|....... .+ .....++
T Consensus 133 ~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~ 212 (356)
T PRK04870 133 PLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLV 212 (356)
T ss_pred cCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEE
Confidence 43 478999999865458999999999999999999988888887789999999986432111 11 1224588
Q ss_pred EECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHcCC
Q 013019 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 352 v~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrg---L~tl~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
+.|+|| ++.+| .+.|+++++++++++++..+..+ .++....+.+... .+.+...+++..++.+.+.+.|++.+
T Consensus 213 ~~S~SK-~~~~G-lRiG~~i~~~~~i~~~~~~~~~~--~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 288 (356)
T PRK04870 213 MRTVSK-LGLAG-LRLGYLAGHPAWIAELDKVRPPY--NVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALP 288 (356)
T ss_pred Eecchh-hhhHH-HhhhhhhCCHHHHHHHHHccCCC--cCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999 66665 67899999999999888765333 3444433333333 34455556677788888889998887
Q ss_pred Ce
Q 013019 429 KV 430 (451)
Q Consensus 429 ~V 430 (451)
++
T Consensus 289 ~~ 290 (356)
T PRK04870 289 GV 290 (356)
T ss_pred Cc
Confidence 76
No 82
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.87 E-value=3.4e-20 Score=191.89 Aligned_cols=219 Identities=15% Similarity=0.182 Sum_probs=160.3
Q ss_pred hhHHHHHHHHHhhhCC--CcEEE-eCCHHHHHHHHHHHH----ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 210 PTTVVVEEKMSALEGA--ESTVI-MASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~ga--e~~vv-~sSG~aAi~~al~al----l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
...+.+++++++++|. .+.++ ++++++++..++.++ +++||+|+++++.|.+.+..+....+..|++++.++.
T Consensus 63 ~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 142 (401)
T PRK10874 63 ARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPL 142 (401)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEec
Confidence 3456788999999997 34455 455569999998887 4789999999999998765565666778998888753
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEEECCc
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSAT 356 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv~S~S 356 (451)
.|+++++++++++ |++|++++|+||||.+.|+++|.++|+++|+++++|++++.+ ...+...+++|+++.|++
T Consensus 143 ~~~~~~d~~~l~~~i~~~-t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~ 221 (401)
T PRK10874 143 GADRLPDVDLLPELITPR-TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGH 221 (401)
T ss_pred CCCCcCCHHHHHHhcCcC-cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEecc
Confidence 3789999999874 999999999999999999999999999999999999998643 222223468999999999
Q ss_pred ccCCccccceeEEEEeCHHHHHHHHHHhH---------------------hhCCCccHHHHHHHHHhhHHHHH-----HH
Q 013019 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTLHL-----RV 410 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~~eli~~lr~~~~---------------------~~G~~ls~~~a~l~lrgL~tl~~-----Rl 410 (451)
|+++.+| .|+++.++++++++..+.. ...++.+......+..+++.+.. ..
T Consensus 222 K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~ 298 (401)
T PRK10874 222 KLYGPTG---IGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAE 298 (401)
T ss_pred cccCCCc---cEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHH
Confidence 9877665 6899999988877643210 00112222233333334443321 23
Q ss_pred HHHHHHHHHHHHHHHcCCCeEE
Q 013019 411 QQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 411 ~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
+++.+.+..+.+.|+++|+++.
T Consensus 299 ~~~~~l~~~l~~~l~~~~g~~~ 320 (401)
T PRK10874 299 SWSRSLATLAEDALAKLPGFRS 320 (401)
T ss_pred HHHHHHHHHHHHHHhcCCCEEE
Confidence 4445567788888888888754
No 83
>PRK08960 hypothetical protein; Provisional
Probab=99.87 E-value=4.9e-20 Score=190.15 Aligned_cols=213 Identities=16% Similarity=0.159 Sum_probs=153.3
Q ss_pred hhHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 210 PTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 210 pt~~~Lee~LA~l~g--------ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
+....|++.++++++ .++.++++++++++..++.+++++||+|++++|+|......+ ...|.++..++
T Consensus 69 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~----~~~g~~~~~v~ 144 (387)
T PRK08960 69 RGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFL----RLVEGAAQLVP 144 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhcCCeEEEEe
Confidence 345667787777752 244555555569999999999999999999999999876544 33455554443
Q ss_pred C-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----ccccCC
Q 013019 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLG 347 (451)
Q Consensus 282 ~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~pl~~G 347 (451)
. .|+++++++++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... ..+...
T Consensus 145 ~~~~~~~~~d~~~l~~~~~~~-~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~ 223 (387)
T PRK08960 145 VGPDSRYQLTPALVERHWNAD-TVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVD 223 (387)
T ss_pred cCcccCCCCCHHHHHHHhCcc-ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhcc
Confidence 1 4688999988874 889999999999999987 556777899999999999998653211 111221
Q ss_pred -CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHH
Q 013019 348 -ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMA 421 (451)
Q Consensus 348 -aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL-----~tl~~Rl~~~~~nA~~La 421 (451)
..+++.|+||.++.+| .+.|+++++++++++++..........+...+.++...+ +.+....++..++.+.+.
T Consensus 224 ~~vi~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~ 302 (387)
T PRK08960 224 DDAFVLNSFSKYFGMTG-WRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLL 302 (387)
T ss_pred CCEEEEeecccccCCcc-cEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHH
Confidence 2478899999998776 679999999999999888776555555555544333333 234344455667777888
Q ss_pred HHHHcCC
Q 013019 422 EILEAHP 428 (451)
Q Consensus 422 e~L~~~p 428 (451)
+.|++++
T Consensus 303 ~~L~~~~ 309 (387)
T PRK08960 303 PALRELG 309 (387)
T ss_pred HHHHhcC
Confidence 8998764
No 84
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.87 E-value=2.6e-20 Score=190.40 Aligned_cols=218 Identities=19% Similarity=0.230 Sum_probs=163.7
Q ss_pred HHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHcc---CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 212 TVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 212 ~~~Lee~LA~l~gae---~~vv~sSG~aAi~~al~all~---~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
..++++.+++++|.+ +.+++++|++++..++.++.. +||+|+++++.|.+.+..+....+..|+++.+++.
T Consensus 45 ~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 124 (373)
T cd06453 45 YEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDD 124 (373)
T ss_pred HHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCC
Confidence 456889999999965 555666777999999999887 89999999999998765555555677888888754
Q ss_pred --CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc-ccccCCCcEEEECCcccC
Q 013019 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSATKFI 359 (451)
Q Consensus 283 --~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-~pl~~GaDiVv~S~SK~l 359 (451)
.|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|++|++|++++.+... ...++|+|+++.|++|++
T Consensus 125 ~~~d~~~l~~~l~~-~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~ 203 (373)
T cd06453 125 GQLDLEALEKLLTE-RTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKML 203 (373)
T ss_pred CCcCHHHHHHHhcC-CceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEecccccc
Confidence 378999999987 4999999999999999999999999999999999999998765432 223568999999999999
Q ss_pred CccccceeEEEEeCHHHHHHHHHHhHh--------------------h-CCCccHHHHHHHHHhhHH-----HHHHHHHH
Q 013019 360 GGHNDVLAGSISGSGKLVTQIRNLHHV--------------------L-GGALNPNAAYLIIRGMKT-----LHLRVQQQ 413 (451)
Q Consensus 360 ~G~gdv~gG~Iv~~~eli~~lr~~~~~--------------------~-G~~ls~~~a~l~lrgL~t-----l~~Rl~~~ 413 (451)
++.+ +|+++++++++++++..... + ...++......+..+++. +..+.++.
T Consensus 204 ~~~g---~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~ 280 (373)
T cd06453 204 GPTG---IGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHE 280 (373)
T ss_pred CCCC---cEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 9854 78999999888776643210 0 011222222222223332 33345666
Q ss_pred HHHHHHHHHHHHcCCCeEEE
Q 013019 414 NSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 414 ~~nA~~Lae~L~~~p~V~~V 433 (451)
.+.++.+.+.|+++|+++.+
T Consensus 281 ~~~~~~l~~~l~~~~~~~~~ 300 (373)
T cd06453 281 HELTAYALERLSEIPGVRVY 300 (373)
T ss_pred HHHHHHHHHHHhcCCCeEEe
Confidence 67788888899988877654
No 85
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.87 E-value=2.9e-20 Score=192.44 Aligned_cols=208 Identities=18% Similarity=0.219 Sum_probs=148.6
Q ss_pred HHHHHHHHhhh----CC-----CcEEEeCCHH-HHHHHHHHHHccC---CCeEEEcCCCCcchHHHHHHhhhcCCcEEEE
Q 013019 213 VVVEEKMSALE----GA-----ESTVIMASGM-SASTVMLLALVPA---GGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (451)
Q Consensus 213 ~~Lee~LA~l~----ga-----e~~vv~sSG~-aAi~~al~all~~---GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~ 279 (451)
..|++.|++++ |. ++.+++++|. +++..++.+++++ ||.|++++|.|..... .+...|+++..
T Consensus 68 ~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~----~~~~~g~~~~~ 143 (396)
T PRK09147 68 PALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEG----AALLAGAEPYF 143 (396)
T ss_pred HHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHH----HHHhcCCEEEE
Confidence 45666666643 52 2356666665 9999999999999 9999999999987553 34456777766
Q ss_pred eCC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc---c---
Q 013019 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A--- 343 (451)
Q Consensus 280 vd~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~---p--- 343 (451)
++. .|++++++.+.+ ++++|++++|+||||.+++ +++|+++|++|+++||+||+|....... +
T Consensus 144 vp~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 222 (396)
T PRK09147 144 LNCDPANNFAPDFDAVPAEVWA-RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGL 222 (396)
T ss_pred eccCccccCccCHHHHHHHHhh-ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchh
Confidence 642 368889887766 4999999999999999985 6788888999999999999987542111 1
Q ss_pred c----cCC-----CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHH
Q 013019 344 L----SLG-----ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQ 411 (451)
Q Consensus 344 l----~~G-----aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~ 411 (451)
+ ..+ ..+++.|+||.++.+| ++.||+++++++++++...+...+..++......+...+ +.+....+
T Consensus 223 ~~~~~~~~~~~~~~vi~~~S~SK~~~~~G-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~ 301 (396)
T PRK09147 223 LEAAAELGRDDFKRLVVFHSLSKRSNVPG-LRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRA 301 (396)
T ss_pred hhhccccCccccccEEEEeccccccCCcc-ceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHH
Confidence 1 112 2389999999888777 678999999999999887766555555555544433333 22333445
Q ss_pred HHHHHHHHHHHHHHc
Q 013019 412 QQNSTALRMAEILEA 426 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~ 426 (451)
+..++.+.+.+.|++
T Consensus 302 ~~~~~~~~~~~~L~~ 316 (396)
T PRK09147 302 LYREKFDAVTPILAP 316 (396)
T ss_pred HHHHHHHHHHHHHHH
Confidence 555666667777765
No 86
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.86 E-value=1.6e-20 Score=189.96 Aligned_cols=221 Identities=19% Similarity=0.238 Sum_probs=162.2
Q ss_pred CccccC-CCchh-HHHHHHHHHhhhCC----CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcC
Q 013019 201 SFEYGR-YGNPT-TVVVEEKMSALEGA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (451)
Q Consensus 201 ~~~Y~R-~~npt-~~~Lee~LA~l~ga----e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~ 273 (451)
-..|+| ||.|. +..|.+++++++|. ++.|++|+|. +++..++++++.+||+||+.+|.|.+..... ...
T Consensus 62 ~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~----~ma 137 (420)
T KOG0257|consen 62 TNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQV----VMA 137 (420)
T ss_pred hccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHH----hhc
Confidence 356777 46655 67789999998774 5556666666 9999999999999999999999998866433 233
Q ss_pred CcEEEEeC-------------CCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCC
Q 013019 274 GITATVID-------------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFAT 337 (451)
Q Consensus 274 Gi~v~~vd-------------~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~ 337 (451)
|....++. ..|.++++.+++++ ||+|++++|+||||++.. |++|+++|++||+++|.||+|.-
T Consensus 138 G~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~k-Tk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~ 216 (420)
T KOG0257|consen 138 GGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEK-TKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEW 216 (420)
T ss_pred CCcceeeccccccccccCccccCChHHHHhhccCC-ccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHH
Confidence 43333332 24899999999985 999999999999999985 88999999999999999999753
Q ss_pred CCcc---------ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCC-CccHHH-HHHH--HHh--
Q 013019 338 PLNQ---------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG-ALNPNA-AYLI--IRG-- 402 (451)
Q Consensus 338 ~~~~---------~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~-~ls~~~-a~l~--lrg-- 402 (451)
.+.. .|..+...+.+.|++|+++..|+ +.||+++++.++..++..+...-. +..+.. |... ..+
T Consensus 217 ~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGW-rlGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~ 295 (420)
T KOG0257|consen 217 LVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGW-RLGWAIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELA 295 (420)
T ss_pred HhhCCCcceeeecCCchhheEEEeccccceeeeeee-eeeeeechHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhh
Confidence 2111 12223356889999999998884 678889988888888877654432 223332 1111 111
Q ss_pred ------hHHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 403 ------MKTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 403 ------L~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+.......+...++.+.|++.|.+.
T Consensus 296 ~~~p~~~y~~~~~~~~y~~krdil~k~L~~l 326 (420)
T KOG0257|consen 296 CLQPGGSYFITELVKEYKEKRDILAKALEEL 326 (420)
T ss_pred ccCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2344446677889999999999986
No 87
>PRK08068 transaminase; Reviewed
Probab=99.86 E-value=5.3e-20 Score=189.97 Aligned_cols=218 Identities=14% Similarity=0.097 Sum_probs=155.7
Q ss_pred ccCCC-chhHHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcC
Q 013019 204 YGRYG-NPTTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (451)
Q Consensus 204 Y~R~~-npt~~~Lee~LA~l~----ga----e-~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~ 273 (451)
+.+|+ .+....|++++++++ |. + +.+++++|++++..++.+++++||+|++++|+|+..... +...
T Consensus 63 ~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~----~~~~ 138 (389)
T PRK08068 63 NHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSG----VALA 138 (389)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH----HHhc
Confidence 34453 445677888888876 42 3 344555555899999999999999999999999876533 3456
Q ss_pred CcEEEEeCC-------CCHHHHHHhhcCCCeEEEEEeCCCCCccccccH---HHHHHHHHhcCCEEEEecCCCCCCcc--
Q 013019 274 GITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ-- 341 (451)
Q Consensus 274 Gi~v~~vd~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL---~~IaelA~~~g~~lVVD~tfa~~~~~-- 341 (451)
|+++..++. .|++++++++++ ++++|++++|+||||.+++. ++|.++|+++|+++|+|++|......
T Consensus 139 g~~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~ 217 (389)
T PRK08068 139 RAQFETMPLIAENNFLPDYTKIPEEVAE-KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQ 217 (389)
T ss_pred CCEEEEeecccccCCCCCHHHHHHhccc-cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCC
Confidence 777665542 257889888876 48999999999999999975 67888899999999999998542111
Q ss_pred cc---cc----CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh----HHHHHHH
Q 013019 342 KA---LS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRV 410 (451)
Q Consensus 342 ~p---l~----~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL----~tl~~Rl 410 (451)
.+ +. ....+++.|+||.++.+| ++.||++++++++++++.....+..+..+..+..+...+ +.+....
T Consensus 218 ~~~s~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 296 (389)
T PRK08068 218 KPVSFLQTPGAKDVGIELYTLSKTFNMAG-WRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELV 296 (389)
T ss_pred CCcChhhCCCccCCEEEEecchhccCCcc-ceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHH
Confidence 11 11 123489999999998776 678999999999999988776655444433322222222 3344445
Q ss_pred HHHHHHHHHHHHHHHcC
Q 013019 411 QQQNSTALRMAEILEAH 427 (451)
Q Consensus 411 ~~~~~nA~~Lae~L~~~ 427 (451)
++..++...+.+.|+++
T Consensus 297 ~~~~~~r~~~~~~L~~~ 313 (389)
T PRK08068 297 ARYESRRNAFISACREI 313 (389)
T ss_pred HHHHHHHHHHHHHHHHC
Confidence 66667777888888876
No 88
>PRK07682 hypothetical protein; Validated
Probab=99.86 E-value=2.3e-20 Score=191.69 Aligned_cols=213 Identities=11% Similarity=0.135 Sum_probs=154.3
Q ss_pred chhHHHHHHHHHhhhC----C----C-cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEE
Q 013019 209 NPTTVVVEEKMSALEG----A----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (451)
Q Consensus 209 npt~~~Lee~LA~l~g----a----e-~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~ 279 (451)
.+....|+++++++++ . + +.+++++|++|+..++.+++++||+|++++|+|+..... +...|.++..
T Consensus 56 ~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~----~~~~g~~~~~ 131 (378)
T PRK07682 56 NAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPL----VTLAGGVPVP 131 (378)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHH----HHHcCCEEEE
Confidence 3456677777777663 2 3 344445556999999999999999999999999865433 3344555544
Q ss_pred eC-------CCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc------c
Q 013019 280 ID-------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK------A 343 (451)
Q Consensus 280 vd-------~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~------p 343 (451)
++ ..|+++|++++.++ +++|++++|+||||.+++ +++|.++|+++|+++|+|++|....... .
T Consensus 132 ~~~~~~~~~~~d~~~l~~~~~~~-~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 210 (378)
T PRK07682 132 VATTLENEFKVQPAQIEAAITAK-TKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFAS 210 (378)
T ss_pred eecCCccCCCCCHHHHHhhcCcc-cEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhh
Confidence 43 23789999998774 899999999999999975 8899999999999999999987543211 1
Q ss_pred cc--CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH----HHHHHHHHHHHHH
Q 013019 344 LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 417 (451)
Q Consensus 344 l~--~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~----tl~~Rl~~~~~nA 417 (451)
+. ....+++.|+||.++.+| .+.||++++++++++++..........+...+..+.+.|+ .+....+...++.
T Consensus 211 ~~~~~~~~i~~~S~SK~~~~~G-lR~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 289 (378)
T PRK07682 211 IKGMRERTILISGFSKGFAMTG-WRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRR 289 (378)
T ss_pred cccccCCEEEEecCcccccChh-hhhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 11 124688999999998665 5789999999999998876654444445555544444443 2344455566778
Q ss_pred HHHHHHHHcC
Q 013019 418 LRMAEILEAH 427 (451)
Q Consensus 418 ~~Lae~L~~~ 427 (451)
..+.+.|+++
T Consensus 290 ~~~~~~L~~~ 299 (378)
T PRK07682 290 NFFVTSFNEI 299 (378)
T ss_pred HHHHHHHHHC
Confidence 8888889876
No 89
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.86 E-value=2.5e-20 Score=192.89 Aligned_cols=215 Identities=13% Similarity=0.147 Sum_probs=152.3
Q ss_pred CCchh-HHHHHHHHHhhh----CC----CcEEEeCCH-HHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE
Q 013019 207 YGNPT-TVVVEEKMSALE----GA----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (451)
Q Consensus 207 ~~npt-~~~Lee~LA~l~----ga----e~~vv~sSG-~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~ 276 (451)
|+++. ...|++++++++ |. ++.+++++| ++++..++.+++++||+|++++|+|+.....+ ...|++
T Consensus 69 Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~----~~~g~~ 144 (394)
T PRK05942 69 YPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGP----LIAGAQ 144 (394)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCE
Confidence 44433 356777777765 42 334555555 59999999999999999999999999865433 346777
Q ss_pred EEEeCC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----c
Q 013019 277 ATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----K 342 (451)
Q Consensus 277 v~~vd~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~ 342 (451)
+..++. .|++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .
T Consensus 145 ~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~ 223 (394)
T PRK05942 145 IYPIILKPENDWLIDLSSIPEEVAQ-QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPT 223 (394)
T ss_pred EEEeecCCccCCccCHHHHHHhccc-cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCC
Confidence 666532 478899998876 4999999999999999997 778999999999999999998643211 1
Q ss_pred c---cc--CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH---H-HHHHHHHH
Q 013019 343 A---LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---T-LHLRVQQQ 413 (451)
Q Consensus 343 p---l~--~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~---t-l~~Rl~~~ 413 (451)
+ +. ....+++.|+||.++.+| ++.||++++++++++++......+...+...+.++...++ . +....++.
T Consensus 224 ~~~~~~~~~~~~i~~~SfSK~~~~~G-lRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 302 (394)
T PRK05942 224 SLLEIPGAKDIGVEFHTLSKTYNMAG-WRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERY 302 (394)
T ss_pred ChhhCCCccccEEEEecchhccCChh-hheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 1 11 123578899999997666 6789999999999999887765444444444444333333 2 22333445
Q ss_pred HHHHHHHHHHHHcC
Q 013019 414 NSTALRMAEILEAH 427 (451)
Q Consensus 414 ~~nA~~Lae~L~~~ 427 (451)
.++...+.+.|+++
T Consensus 303 ~~~~~~~~~~L~~~ 316 (394)
T PRK05942 303 RTRRDFLIQGLGEL 316 (394)
T ss_pred HHHHHHHHHHHHHC
Confidence 56666777888765
No 90
>PLN02187 rooty/superroot1
Probab=99.86 E-value=9.4e-20 Score=192.97 Aligned_cols=216 Identities=14% Similarity=0.132 Sum_probs=153.5
Q ss_pred chhHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 209 NPTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 209 npt~~~Lee~LA~l~g--------ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
.+....|++.+|++++ .++.++++++++++..++.+++++||+|++++|.|..... .+...|+++..+
T Consensus 107 ~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~----~~~~~g~~~~~~ 182 (462)
T PLN02187 107 GAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDA----RAAYSGLEVRKF 182 (462)
T ss_pred CCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHH----HHHHcCCEEEEE
Confidence 3446678888888763 2344444455599999999999999999999999997543 345567777665
Q ss_pred CC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----ccc-c
Q 013019 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-S 345 (451)
Q Consensus 281 d~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~pl-~ 345 (451)
+. .|+++|+++++++ +++|++++|+||||.+++ +++|+++|+++|++||+||+|...... .++ .
T Consensus 183 ~l~~~~~~~~d~~~l~~~~~~~-~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~ 261 (462)
T PLN02187 183 DLLPEKEWEIDLEGIEAIADEN-TVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGK 261 (462)
T ss_pred eCccccCCccCHHHHHHhcCCC-cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHH
Confidence 42 3789999988774 899999999999999986 788999999999999999998763321 111 1
Q ss_pred C---CCcEEEECCcccCCccccceeEEEEe-CHH----HHHHHHHHhHhhCC--CccHHHHHHHHHhh-----HHHHHHH
Q 013019 346 L---GADLVLHSATKFIGGHNDVLAGSISG-SGK----LVTQIRNLHHVLGG--ALNPNAAYLIIRGM-----KTLHLRV 410 (451)
Q Consensus 346 ~---GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~e----li~~lr~~~~~~G~--~ls~~~a~l~lrgL-----~tl~~Rl 410 (451)
+ ..-+++.|+||.++.+| .+.||+++ +++ +++.+...+..++. ..+.+...++...| +.+....
T Consensus 262 ~~~~~~vi~l~SfSK~f~~pG-lRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~ 340 (462)
T PLN02187 262 FASIVPVLTLAGISKGWVVPG-WKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKN 340 (462)
T ss_pred hccCCcEEEEecchhhcCCcc-ceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHH
Confidence 1 12488899999999888 67888887 333 33455555554433 23454444444333 2344455
Q ss_pred HHHHHHHHHHHHHHHcCCCe
Q 013019 411 QQQNSTALRMAEILEAHPKV 430 (451)
Q Consensus 411 ~~~~~nA~~Lae~L~~~p~V 430 (451)
+...++.+.+.+.|+++|.+
T Consensus 341 ~~l~~~r~~l~~~L~~~~~~ 360 (462)
T PLN02187 341 KILKHNVDLVCDRLKDIPCV 360 (462)
T ss_pred HHHHHHHHHHHHHHhhCCCC
Confidence 66777888899999887643
No 91
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.86 E-value=6.1e-20 Score=192.67 Aligned_cols=214 Identities=16% Similarity=0.142 Sum_probs=151.1
Q ss_pred hHHHHHHHHHhhhCC--------CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 211 TTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 211 t~~~Lee~LA~l~ga--------e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
....|++.++++++. ++.++++++++|+..++.+++++||+|++++|.|..... .....|+++..++.
T Consensus 95 G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~----~~~~~g~~~~~~~~ 170 (430)
T PLN00145 95 GLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEA----RAVFSGLEVRHFDL 170 (430)
T ss_pred cCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHH----HHHHcCCEEEEeeC
Confidence 356788888887642 456666666799999999999999999999999987543 23345777776552
Q ss_pred -------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----ccc-cC-
Q 013019 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-SL- 346 (451)
Q Consensus 283 -------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~pl-~~- 346 (451)
.|+++|+++++++ +++|++++|+||||.+++ +++|.++|+++|++||+|++|...... .++ .+
T Consensus 171 ~~~~~~~~d~~~l~~~~~~~-~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~ 249 (430)
T PLN00145 171 LPERGWEVDLEGVEALADEN-TVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFG 249 (430)
T ss_pred CcccCCcCCHHHHHHHhCcC-ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhc
Confidence 3789999988874 999999999999999997 788899999999999999998753221 111 11
Q ss_pred --CCcEEEECCcccCCccccceeEEEEe--CHHHHHH------HHHHhHhhCCCccHHHHHHHHHhhH-----HHHHHHH
Q 013019 347 --GADLVLHSATKFIGGHNDVLAGSISG--SGKLVTQ------IRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQ 411 (451)
Q Consensus 347 --GaDiVv~S~SK~l~G~gdv~gG~Iv~--~~eli~~------lr~~~~~~G~~ls~~~a~l~lrgL~-----tl~~Rl~ 411 (451)
..-|++.|+||.++.+| .+.||+++ ++.+++. ++.... .....+.+.++.+...|+ .+...++
T Consensus 250 ~~~~vi~~~S~SK~~~~pG-~RlG~iv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~ 327 (430)
T PLN00145 250 EVAPVLTLGSISKRWVVPG-WRLGWIATCDPNGILKETKVVDSIRNYLN-ISTDPATFVQGAIPQIIANTKEEFFTKTLG 327 (430)
T ss_pred ccCcEEEEeccccccCCCC-eeEEEEEEecchhhhhhhHHHHHHHHHhc-ccCCCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 23488999999998887 57888886 3444432 222222 222334444444333332 3455566
Q ss_pred HHHHHHHHHHHHHHcCCCeE
Q 013019 412 QQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~~p~V~ 431 (451)
+..++++.+.+.|++++++.
T Consensus 328 ~~~~~~~~~~~~L~~~~g~~ 347 (430)
T PLN00145 328 LLKETADICYEKIKEIKCIT 347 (430)
T ss_pred HHHHHHHHHHHHHhcCCCCC
Confidence 77778888889998876653
No 92
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.86 E-value=1.6e-20 Score=189.98 Aligned_cols=215 Identities=18% Similarity=0.254 Sum_probs=161.8
Q ss_pred cccCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 203 EYGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 203 ~Y~R~~npt~~~Lee~LA~l~gae-~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
.|.+|+++....|++.+++++|.+ +.+++++|+ +++..++ .++.+| .|++.+|+|.... ..++..|+++..+
T Consensus 40 ~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~-~~l~~g-~vl~~~p~y~~~~----~~~~~~g~~~~~~ 113 (330)
T TIGR01140 40 AWARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLP-RLLAPG-RVLVLAPTYSEYA----RAWRAAGHEVVEL 113 (330)
T ss_pred HHhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHH-HHhCCC-eEEEeCCCcHHHH----HHHHHcCCEEEEe
Confidence 477888888899999999999963 667777777 6766654 446777 6999999998754 3456778988877
Q ss_pred CCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcccc-c----cCCCcEEE
Q 013019 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA-L----SLGADLVL 352 (451)
Q Consensus 281 d~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~p-l----~~GaDiVv 352 (451)
+ |++++++.+++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|........ . ..+.++++
T Consensus 114 ~--d~~~l~~~~~~--~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~ 189 (330)
T TIGR01140 114 P--DLDRLPAALEE--LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVL 189 (330)
T ss_pred C--CHHHHHhhccc--CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEE
Confidence 7 89999998843 789999999999999998 66778888999999999999865432211 1 12456999
Q ss_pred ECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH---HHHHHHHHHHHHHHHHHHHHcCCC
Q 013019 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEILEAHPK 429 (451)
Q Consensus 353 ~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t---l~~Rl~~~~~nA~~Lae~L~~~p~ 429 (451)
.|+||+++.+| ++.|++++++++++++......+ ..+...+..+.+.++. .....++..++.+.+.+.|++++.
T Consensus 190 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 266 (330)
T TIGR01140 190 RSLTKFFGLAG-LRLGFVVAHPALLARLREALGPW--TVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGG 266 (330)
T ss_pred EecchhhcCch-hhhhheeCCHHHHHHHHhcCCCC--CchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999998776 67899999999998888765433 3344544444444432 233456666778888899998876
Q ss_pred e
Q 013019 430 V 430 (451)
Q Consensus 430 V 430 (451)
+
T Consensus 267 ~ 267 (330)
T TIGR01140 267 L 267 (330)
T ss_pred c
Confidence 5
No 93
>PLN00175 aminotransferase family protein; Provisional
Probab=99.86 E-value=1.4e-19 Score=188.86 Aligned_cols=210 Identities=15% Similarity=0.200 Sum_probs=155.9
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCC-HHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 212 TVVVEEKMSALE----GA----ESTVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 212 ~~~Lee~LA~l~----ga----e~~vv~sS-G~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
...|++.+++++ |. ++.+++++ +++|+..++.+++++||+|++++|.|..... .+...|.++..++.
T Consensus 93 ~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~~ 168 (413)
T PLN00175 93 VPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA----TLSMAGAKIKTVTL 168 (413)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHH----HHHHcCCEEEEEEC
Confidence 455667666654 32 22455555 4599999999999999999999999987553 34456777766642
Q ss_pred ------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc---c-cc----
Q 013019 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A-LS---- 345 (451)
Q Consensus 283 ------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~---p-l~---- 345 (451)
.|+++|++++.++ +++|++++|+||||.+++ +++|+++|++||+++|+|++|....... + ..
T Consensus 169 ~~~~~~~~~~~l~~~~~~~-~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~ 247 (413)
T PLN00175 169 RPPDFAVPEDELKAAFTSK-TRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGM 247 (413)
T ss_pred CcccCCCCHHHHHHhcCcC-ceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCC
Confidence 3689999999774 999999999999999985 7789999999999999999986543211 1 11
Q ss_pred CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH----HHHHHHHHHHHHHHHHH
Q 013019 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMA 421 (451)
Q Consensus 346 ~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~----tl~~Rl~~~~~nA~~La 421 (451)
.+..|++.|+||.++.+| .+.||+++++++++.++........+.+....+++...|+ .+....+...++.+.+.
T Consensus 248 ~~~vi~i~SfSK~~~~~G-~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~ 326 (413)
T PLN00175 248 YERTVTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILV 326 (413)
T ss_pred cCcEEEEecchhhccCcc-hheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 134588999999998776 5789999999999999887765555566666555555553 23444556677888888
Q ss_pred HHHHcC
Q 013019 422 EILEAH 427 (451)
Q Consensus 422 e~L~~~ 427 (451)
+.|+++
T Consensus 327 ~~L~~~ 332 (413)
T PLN00175 327 EGLKEV 332 (413)
T ss_pred HHHHHC
Confidence 999886
No 94
>PRK07337 aminotransferase; Validated
Probab=99.86 E-value=4.9e-20 Score=190.05 Aligned_cols=210 Identities=20% Similarity=0.224 Sum_probs=153.7
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC--
Q 013019 212 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-- 281 (451)
Q Consensus 212 ~~~Lee~LA~l~----ga----e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd-- 281 (451)
...|++.+++++ |. ++.++++++++|+..++.+++++||+|++++|+|......+ ...|.++..++
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~~ 144 (388)
T PRK07337 69 LAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFV----AAAEGRPVLVPSG 144 (388)
T ss_pred CHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHH----HHcCCEEEEeecC
Confidence 567888888875 32 44555555669999999999999999999999999876443 34466665553
Q ss_pred -----CCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----ccccCCCc
Q 013019 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLGAD 349 (451)
Q Consensus 282 -----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~pl~~GaD 349 (451)
..|++++++.++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... ....++.+
T Consensus 145 ~~~~~~~~~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 223 (388)
T PRK07337 145 PAERFQLTAADVEAAWGER-TRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDD 223 (388)
T ss_pred CccCCcCCHHHHHhhcCcc-ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCC
Confidence 23689999999774 899999999999999885 678889999999999999998643211 12223333
Q ss_pred -EEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHH
Q 013019 350 -LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAEI 423 (451)
Q Consensus 350 -iVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL-----~tl~~Rl~~~~~nA~~Lae~ 423 (451)
+++.|+||.++.+| .+.||++++++++++++.....++...+....+++...+ +.+....++..++.+.+.+.
T Consensus 224 vi~~~S~SK~~~~~G-~RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~ 302 (388)
T PRK07337 224 VITINSFSKYFNMTG-WRLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPA 302 (388)
T ss_pred EEEEEechhhcCCch-hheeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHH
Confidence 56889999998776 568999999999999888776665555555544443333 23433345556677778888
Q ss_pred HHcC
Q 013019 424 LEAH 427 (451)
Q Consensus 424 L~~~ 427 (451)
|+++
T Consensus 303 L~~~ 306 (388)
T PRK07337 303 LESL 306 (388)
T ss_pred HHhc
Confidence 8875
No 95
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.86 E-value=3.9e-20 Score=192.43 Aligned_cols=213 Identities=21% Similarity=0.244 Sum_probs=159.0
Q ss_pred CCc-hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC
Q 013019 207 YGN-PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (451)
Q Consensus 207 ~~n-pt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~ 283 (451)
+++ +...+||++|++++|.+++++++||++|+..++..+.. +||.|+++...|+..+. .+...|.++..+...
T Consensus 87 ~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~----~~~~~g~~~~~~~~~ 162 (410)
T PRK13392 87 SGTSHPHVLLERELADLHGKESALLFTSGYVSNDAALSTLGKLLPGCVILSDALNHASMIE----GIRRSGAEKQVFRHN 162 (410)
T ss_pred ccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHH----HHHHcCCeEEEEeCC
Confidence 444 35789999999999999999999999998888877754 89988887767766543 334567777766666
Q ss_pred CHHHHHHhhc---CCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc---------cccCCCcEE
Q 013019 284 DMEGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLV 351 (451)
Q Consensus 284 D~d~Le~ai~---~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~---------pl~~GaDiV 351 (451)
|.+.+++.++ ..++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+.... .+....|++
T Consensus 163 d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div 242 (410)
T PRK13392 163 DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMI 242 (410)
T ss_pred CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEE
Confidence 7766666654 2258999999999999999999999999999999999999987443211 111246899
Q ss_pred EECCcccCCccccceeEEEEeCHHHHHHHHHHhHh--hCCCccHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHc
Q 013019 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAEILEA 426 (451)
Q Consensus 352 v~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~Lae~L~~ 426 (451)
+.|++|.+++. ||++++++++++.++..... ++..+++..++.+...| +....+.+++.++.+++.+.|++
T Consensus 243 ~~tlsK~~g~~----GG~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~ 318 (410)
T PRK13392 243 QGTLAKAFGCL----GGYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNA 318 (410)
T ss_pred EEEChHhhhcc----cchhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999875 58999999999988876543 23445555554443444 33444556677888888888876
Q ss_pred C
Q 013019 427 H 427 (451)
Q Consensus 427 ~ 427 (451)
.
T Consensus 319 ~ 319 (410)
T PRK13392 319 N 319 (410)
T ss_pred c
Confidence 4
No 96
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=5.3e-20 Score=191.47 Aligned_cols=235 Identities=19% Similarity=0.228 Sum_probs=174.2
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHH-HHHHHHHHHH---ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 209 NPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae--~~vv~sSG~-aAi~~al~al---l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
....++.|++++++.|++ +.|+|+.|+ +++..+..++ +++||+||+++..|.+....+....++.|+++++++.
T Consensus 65 t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~ 144 (405)
T COG0520 65 TDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPL 144 (405)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEec
Confidence 345677899999999975 567777666 8999999888 6999999999999999887777778888999988874
Q ss_pred C-----CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEECCc
Q 013019 283 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSAT 356 (451)
Q Consensus 283 ~-----D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S~S 356 (451)
. +.++++..++++ ||+|.+...+|.||.+.|+++|+++||++|++++||.+++.+. ..+.-++|+|+++.|.+
T Consensus 145 ~~~g~~~~~~~~~~i~~~-Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgH 223 (405)
T COG0520 145 DDDGLLDLDALEKLITPK-TKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGH 223 (405)
T ss_pred CCCCCcCHHHHHHhcCCC-ceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcCCCEEEEccc
Confidence 2 588999988874 9999999999999999999999999999999999999987763 33444689999999999
Q ss_pred ccCCccccceeEEEEeCHHHHHHHHHHhH----------------------hhCCCccHHHHHHHHHhhHHH---H-HHH
Q 013019 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH----------------------VLGGALNPNAAYLIIRGMKTL---H-LRV 410 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~~eli~~lr~~~~----------------------~~G~~ls~~~a~l~lrgL~tl---~-~Rl 410 (451)
||+.|+. ..|++++++++++++..... .-.++++....+.+..+++.+ . ..+
T Consensus 224 Kwl~gP~--GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i 301 (405)
T COG0520 224 KWLLGPT--GIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAI 301 (405)
T ss_pred ccccCCC--ceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHH
Confidence 9888884 38999999999888732211 011122222222222233322 2 123
Q ss_pred -HHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccccc
Q 013019 411 -QQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLVGF 449 (451)
Q Consensus 411 -~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv~f 449 (451)
++..+....+.+.|++.|+|+. +.|.. .....+++|
T Consensus 302 ~~~e~~L~~~~~~~L~~~~~v~i-~g~~~--~~r~~~vsF 338 (405)
T COG0520 302 EAHERELTEYLLEGLSELPGVEI-YGPPD--ADRGGIVSF 338 (405)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEE-ecCCc--ccCceEEEE
Confidence 3334567778888999999855 44433 334445544
No 97
>PLN02483 serine palmitoyltransferase
Probab=99.86 E-value=8.6e-20 Score=194.49 Aligned_cols=213 Identities=17% Similarity=0.230 Sum_probs=164.6
Q ss_pred CC-chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCH
Q 013019 207 YG-NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (451)
Q Consensus 207 ~~-npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~ 285 (451)
|+ .+..++||++||+++|.++++++++|+.++..++.+++++||+|+++++.|.+... .++..|+++..++..|.
T Consensus 142 ~g~~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~----~~~~~Ga~v~~~~~~d~ 217 (489)
T PLN02483 142 GGTTKLHRELEELVARFVGKPAAIVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVN----GARGSGATIRVFQHNTP 217 (489)
T ss_pred cCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHH----HHHHcCCeEEEEeCCCH
Confidence 44 57889999999999999999999999999988899999999999999999988653 34567899988887788
Q ss_pred HHHHHhhcC------CCe-----E-EEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc-------c--cc
Q 013019 286 EGLEAALNN------NNV-----S-LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------K--AL 344 (451)
Q Consensus 286 d~Le~ai~~------~~t-----k-lV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-------~--pl 344 (451)
+++++.+++ .++ + +|++|...|++|.+.++++|.++|+++|++|++||+++.+... . ..
T Consensus 218 ~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v 297 (489)
T PLN02483 218 SHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGV 297 (489)
T ss_pred HHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCC
Confidence 887776642 112 4 6777777899999999999999999999999999998643211 0 11
Q ss_pred -cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH--hhCCCccHHHHHHHHHhhHH---------HHHHHHH
Q 013019 345 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKT---------LHLRVQQ 412 (451)
Q Consensus 345 -~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--~~G~~ls~~~a~l~lrgL~t---------l~~Rl~~ 412 (451)
..+.||++.|+||.+++. ||++++++++++.++.... ..+..+++..+..++.+|+. ...++++
T Consensus 298 ~~~~~dI~~~SfSKs~g~~----GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~ 373 (489)
T PLN02483 298 DPADVDIMMGTFTKSFGSC----GGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQ 373 (489)
T ss_pred CcccCcEEEEecchhcccC----ceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHH
Confidence 135789999999999875 5999999999999887543 23434444444434444432 2345677
Q ss_pred HHHHHHHHHHHHHcC
Q 013019 413 QNSTALRMAEILEAH 427 (451)
Q Consensus 413 ~~~nA~~Lae~L~~~ 427 (451)
..++.+.+.+.|+++
T Consensus 374 l~~~~~~l~~~L~~~ 388 (489)
T PLN02483 374 IRENSNFFRSELQKM 388 (489)
T ss_pred HHHHHHHHHHHHHHC
Confidence 888888999999886
No 98
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.86 E-value=2.7e-20 Score=188.56 Aligned_cols=219 Identities=16% Similarity=0.264 Sum_probs=162.2
Q ss_pred cCCCchhHHHHHHHHHhhhCC-CcEEEeC-CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~ga-e~~vv~s-SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
.+|+.+...+|++.++++++. .+.++++ ++++++..++.+++++||+|++++|+|+... ..+...|+++..++.
T Consensus 49 ~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~----~~~~~~g~~~~~~~~ 124 (346)
T TIGR01141 49 HRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYE----ISAKIHGAEVVKVPL 124 (346)
T ss_pred hcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEecc
Confidence 456677778999999999985 2344455 4558988888999999999999999986433 334567888777653
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc--CCEEEEecCCCCCCcc-ccc---c-CCCcE
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ-KAL---S-LGADL 350 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~--g~~lVVD~tfa~~~~~-~pl---~-~GaDi 350 (451)
.|++++++++++ ++++|++++|+||||.+.+++++.++|+.+ |+++|+|++|...... .+. . ...++
T Consensus 125 ~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i 203 (346)
T TIGR01141 125 DEDGQLDLEDILVAIDD-KPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLI 203 (346)
T ss_pred CCCCCCCHHHHHHhcCC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEE
Confidence 478999998876 499999999999999999999999999887 9999999998732211 111 1 22357
Q ss_pred EEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 351 Vv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
++.|+||+++.+| .+.|+++++++++++++.....++ .++.....+...+ ..+....++..++.+.+.+.|+++
T Consensus 204 ~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 280 (346)
T TIGR01141 204 VLRTLSKAFGLAG-LRIGYAIANAEIIDALNKVRAPFN--LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL 280 (346)
T ss_pred EEehhhHhhhchh-hhceeeecCHHHHHHHHhccCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8899999997665 568999999999998887654443 3344333333333 234445667778888899999988
Q ss_pred CCeE
Q 013019 428 PKVL 431 (451)
Q Consensus 428 p~V~ 431 (451)
|++.
T Consensus 281 ~g~~ 284 (346)
T TIGR01141 281 PGLE 284 (346)
T ss_pred CCCE
Confidence 7765
No 99
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.86 E-value=5e-20 Score=192.88 Aligned_cols=214 Identities=15% Similarity=0.171 Sum_probs=155.8
Q ss_pred CCchh-HHHHHHHHHhhhC----CCcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 207 YGNPT-TVVVEEKMSALEG----AESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 207 ~~npt-~~~Lee~LA~l~g----ae~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
|+.+. ...|++.++++++ .++.+++++|+ +++..++.+++++||.|++++|+|...... ++..|+++..+
T Consensus 117 Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~----~~~~g~~~~~v 192 (431)
T PRK15481 117 YGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINM----LRYAGFSASPV 192 (431)
T ss_pred cCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH----HHHcCCeEEee
Confidence 44443 3568888888765 23355555555 999999999999999999999999886643 44567776665
Q ss_pred CC----CCHHHHHHhhcCCCeEEEEEe-CCCCCccccccHH---HHHHHHHhc-CCEEEEecCCCCCCc---ccccc--C
Q 013019 281 DP----ADMEGLEAALNNNNVSLFFTE-SPTNPFLRCVDVK---LVSDLCHKK-GAIVCIDGTFATPLN---QKALS--L 346 (451)
Q Consensus 281 d~----~D~d~Le~ai~~~~tklV~le-sPsNPtG~v~DL~---~IaelA~~~-g~~lVVD~tfa~~~~---~~pl~--~ 346 (451)
+. .|+++|++++++ ++++|+++ +|+||||.+++.+ +|.++|+++ +++||+|++|..... ..++. .
T Consensus 193 ~~~~~g~~~~~l~~~~~~-~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 271 (431)
T PRK15481 193 SVDAEGMQPEKLERALAQ-GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTT 271 (431)
T ss_pred ccCCCCCCHHHHHHHHhc-CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCC
Confidence 43 478999999876 48998887 9999999999865 899999999 999999999864321 11121 1
Q ss_pred CCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH------HHHHHHHHHHHHHHH
Q 013019 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTALRM 420 (451)
Q Consensus 347 GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t------l~~Rl~~~~~nA~~L 420 (451)
...+++.|+||.++ +| ++.||++++++++++++.........++...+.++...|+. +....+...++.+.+
T Consensus 272 ~~vi~~~SfSK~~~-~G-lRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~ 349 (431)
T PRK15481 272 QRWALIRSVSKALG-PD-LRLAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKL 349 (431)
T ss_pred CCEEEEeeeccccC-CC-ceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHH
Confidence 23589999999999 66 68899999999999887665544344566655554444432 333445566777788
Q ss_pred HHHHHcC
Q 013019 421 AEILEAH 427 (451)
Q Consensus 421 ae~L~~~ 427 (451)
.+.|+++
T Consensus 350 ~~~L~~~ 356 (431)
T PRK15481 350 ARALQQY 356 (431)
T ss_pred HHHHHHc
Confidence 8888875
No 100
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=2.9e-20 Score=188.22 Aligned_cols=212 Identities=20% Similarity=0.283 Sum_probs=148.6
Q ss_pred cccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 203 EYGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 203 ~Y~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
.+.||++|...+|+++|++++|. ...|++++|+ +++..++. ++++|+ |++.+|.|.... ..++..|+++..+
T Consensus 33 ~~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~----~~~~~~G~~v~~v 106 (332)
T PRK06425 33 DISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYK----GYAFTHGIRISAL 106 (332)
T ss_pred hcccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHH----HHHHHcCCeEEEE
Confidence 36789999999999999999986 4456666666 88888776 567764 666689888755 3455678888776
Q ss_pred CCC----CHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc--c-c----cC
Q 013019 281 DPA----DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK--A-L----SL 346 (451)
Q Consensus 281 d~~----D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~--p-l----~~ 346 (451)
+.. |.+.++ ..++++|++++|+||||.+++ +++|.++|+++|++||+||+|....... + . ..
T Consensus 107 p~~~~~~~~~~l~----~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~ 182 (332)
T PRK06425 107 PFNLINNNPEILN----NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSY 182 (332)
T ss_pred eCCcccCcHHHHh----hcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccC
Confidence 542 333333 225899999999999999987 5677778899999999999987543211 1 1 11
Q ss_pred CCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHH-hhHHH-HHHHHHHHHHHHHHHHHH
Q 013019 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR-GMKTL-HLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 347 GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lr-gL~tl-~~Rl~~~~~nA~~Lae~L 424 (451)
...|++.|+||.++.+| ++.||++++++++++++.....+.. +...+..+.. ..+.+ ....+...++.+.+.+.|
T Consensus 183 ~~vi~~~SfSK~~~l~G-lRiGy~v~~~~li~~l~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L 259 (332)
T PRK06425 183 GNVIIGRSLTKILGIPS-LRIGYIATDDYNMKISRKITEPWSV--CDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNL 259 (332)
T ss_pred CCEEEEeecHHhcCCch-hhheeeecCHHHHHHHHHcCCCCcc--CHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34588899999999776 6789999999999988876544332 2322222222 12222 233455566777788888
Q ss_pred HcC
Q 013019 425 EAH 427 (451)
Q Consensus 425 ~~~ 427 (451)
+++
T Consensus 260 ~~~ 262 (332)
T PRK06425 260 EAM 262 (332)
T ss_pred HHC
Confidence 876
No 101
>PRK07550 hypothetical protein; Provisional
Probab=99.86 E-value=6.6e-20 Score=188.98 Aligned_cols=213 Identities=16% Similarity=0.168 Sum_probs=154.1
Q ss_pred HHHHHHHHHhhh----CC---CcEEEeCCH-HHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 212 TVVVEEKMSALE----GA---ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 212 ~~~Lee~LA~l~----ga---e~~vv~sSG-~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
...|++.+++++ |. .+.+++++| ++|+..++.+++++||+|++++|.|..... .++..|+++..++.
T Consensus 69 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~ 144 (386)
T PRK07550 69 LPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKM----WLDMLGIRPVYLPCD 144 (386)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhcCCEEEEEecC
Confidence 445555555544 42 345666666 489999999999999999999999987653 34567888777653
Q ss_pred ------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc--cc---cc---
Q 013019 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--KA---LS--- 345 (451)
Q Consensus 283 ------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~--~p---l~--- 345 (451)
.|+++++++++++ +++|++++|+||||.+++ +++|.++|+++|+++|+|++|+..... .+ ..
T Consensus 145 ~~~~~~~~~~~l~~~~~~~-~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~ 223 (386)
T PRK07550 145 EGPGLLPDPAAAEALITPR-TRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPD 223 (386)
T ss_pred CCcCCCCCHHHHHHHhccc-CcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCC
Confidence 2678899999874 899999999999999986 788999999999999999998643211 11 11
Q ss_pred CC-CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHH----HHHHHHHHHHHHH
Q 013019 346 LG-ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH----LRVQQQNSTALRM 420 (451)
Q Consensus 346 ~G-aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~----~Rl~~~~~nA~~L 420 (451)
.+ ..+++.|+||.++.+| .++|+++++++++++++......+.+.+...++.+...++.+. ...++..++...+
T Consensus 224 ~~~~~i~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l 302 (386)
T PRK07550 224 WDDTLVHLYSFSKSYALTG-HRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAF 302 (386)
T ss_pred ccccEEEEecchhhccCcc-cceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 11 2477999999998555 5789999999999988887766655556666555555444322 2234455677788
Q ss_pred HHHHHcCCCe
Q 013019 421 AEILEAHPKV 430 (451)
Q Consensus 421 ae~L~~~p~V 430 (451)
.+.|.+++++
T Consensus 303 ~~~L~~~~~~ 312 (386)
T PRK07550 303 RAVFARLPGW 312 (386)
T ss_pred HHHHHhCCCc
Confidence 8889887554
No 102
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.86 E-value=6.5e-20 Score=189.13 Aligned_cols=211 Identities=13% Similarity=0.117 Sum_probs=148.2
Q ss_pred hHHHHHHHHHhhh----C--C-Cc-EEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 211 TTVVVEEKMSALE----G--A-ES-TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 211 t~~~Lee~LA~l~----g--a-e~-~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
....|+++|++++ | . .+ .|++++|+ +++..++.+++++||+|++++|+|...... +...|.++..++
T Consensus 69 G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~ 144 (388)
T PRK07366 69 GTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGG----VYLAGGQIYPMP 144 (388)
T ss_pred CCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH----HHhcCCEEEEEE
Confidence 3456777777765 4 2 23 57767666 899999999999999999999999886533 445677766653
Q ss_pred C-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc-----c-cc
Q 013019 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-----A-LS 345 (451)
Q Consensus 282 ~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~-----p-l~ 345 (451)
. .|++++++.+.+ ++++|++++|+||||.+.+ +++|+++|+++|++||+||+|....... . ..
T Consensus 145 ~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 223 (388)
T PRK07366 145 LRAENDFLPVFADIPTEVLA-QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQ 223 (388)
T ss_pred CCCccCCCCCHHHHHHhhcc-cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhh
Confidence 2 256778777765 4899999999999999986 5677888999999999999986543211 1 11
Q ss_pred C----CCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCc-cHHH-H-HHHHH-hhHHHHHHHHHHHHHH
Q 013019 346 L----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL-NPNA-A-YLIIR-GMKTLHLRVQQQNSTA 417 (451)
Q Consensus 346 ~----GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~l-s~~~-a-~l~lr-gL~tl~~Rl~~~~~nA 417 (451)
+ ...|++.|+||.++.+| ++.||++++++++++++..+...+.+. +... + ...+. .-+.+....+...++.
T Consensus 224 ~~~~~~~vi~~~SfSK~~g~~G-lRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r 302 (388)
T PRK07366 224 ADPEKSVSIEFFTLSKSYNMGG-FRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRR 302 (388)
T ss_pred CCCCcccEEEEeecccccCCcc-hhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 1 12377899999998776 678999999999999988776554433 2221 1 11111 1233444455566777
Q ss_pred HHHHHHHHcC
Q 013019 418 LRMAEILEAH 427 (451)
Q Consensus 418 ~~Lae~L~~~ 427 (451)
..+.+.|+++
T Consensus 303 ~~l~~~L~~~ 312 (388)
T PRK07366 303 DAFINALHQI 312 (388)
T ss_pred HHHHHHHHHC
Confidence 7788888776
No 103
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.86 E-value=1.3e-19 Score=188.86 Aligned_cols=219 Identities=14% Similarity=0.170 Sum_probs=153.6
Q ss_pred cCCCch-hHHHHHHHHHhhhCC-------------CcEEEeCC-HHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHh
Q 013019 205 GRYGNP-TTVVVEEKMSALEGA-------------ESTVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV 269 (451)
Q Consensus 205 ~R~~np-t~~~Lee~LA~l~ga-------------e~~vv~sS-G~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~ 269 (451)
.+|+++ ....|++.|+++++. ++.+++++ +++++..++.+++++||+|++++|+|..... .
T Consensus 69 ~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~----~ 144 (412)
T PTZ00433 69 NGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYET----V 144 (412)
T ss_pred CCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHH----H
Confidence 345555 367788888887641 23444554 4599999999999999999999999988553 3
Q ss_pred hhcCCcEEEEeCC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCC
Q 013019 270 LPKMGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL 339 (451)
Q Consensus 270 l~~~Gi~v~~vd~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~ 339 (451)
+...|+++..++. .|+++|+++++++ +++|++++|+||||.+++ +++|+++|+++|++||+|++|....
T Consensus 145 ~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~-~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~ 223 (412)
T PTZ00433 145 CKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDR-TKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMV 223 (412)
T ss_pred HHHcCCEEEEEecCccccCcCCHHHHHHHhccC-ceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccc
Confidence 4566777766642 3688999888764 899999999999999875 7788999999999999999987543
Q ss_pred ccc----cc-cC---CCcEEEECCcccCCccccceeEEEEe------CHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH-
Q 013019 340 NQK----AL-SL---GADLVLHSATKFIGGHNDVLAGSISG------SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK- 404 (451)
Q Consensus 340 ~~~----pl-~~---GaDiVv~S~SK~l~G~gdv~gG~Iv~------~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~- 404 (451)
... ++ .+ ..-+++.|+||.++.+| ++.||+++ .+++++.++...... ...+...+..+...+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG-lRlG~~i~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~q~a~~~~l~~ 301 (412)
T PTZ00433 224 FNGATFTSVADFDTTVPRVILGGTAKNLVVPG-WRLGWLLLVDPHGNGGDFLDGMKRLGMLV-CGPCSVVQAALGEALLN 301 (412)
T ss_pred cCCCCccchhhccCCCceEEEccchhhcCCCC-eeEEEEEEeCCcccHHHHHHHHHHHhhcc-CCCChHHHHHHHHHHhc
Confidence 211 11 11 12478899999998777 67888886 245777776654322 2345554443333332
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHcCCCe
Q 013019 405 ----TLHLRVQQQNSTALRMAEILEAHPKV 430 (451)
Q Consensus 405 ----tl~~Rl~~~~~nA~~Lae~L~~~p~V 430 (451)
.+....++..++.+.+.+.|+++.++
T Consensus 302 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 331 (412)
T PTZ00433 302 TPQEHLEQIVAKLEEGAMVLYNHIGECIGL 331 (412)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 23334456667788888899876544
No 104
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=1.6e-20 Score=191.71 Aligned_cols=218 Identities=16% Similarity=0.206 Sum_probs=159.3
Q ss_pred ccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
+.||+++....|++++|+.+|. ++.|++++|+ +++..++.+++++| |+|++++|.|.... ..++..|+++..+
T Consensus 54 ~~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~----~~~~~~g~~v~~v 129 (354)
T PRK04635 54 LNRYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYA----ISAETFNVGVKAL 129 (354)
T ss_pred hccCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEE
Confidence 6778888889999999999986 4456666666 89999999999999 89999999997643 3456678887776
Q ss_pred CC-----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHh-cCCEEEEecCCCCCCcccc-cc----CCCc
Q 013019 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKA-LS----LGAD 349 (451)
Q Consensus 281 d~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~-~g~~lVVD~tfa~~~~~~p-l~----~GaD 349 (451)
+. .|++.++ .+ + ++++|++++|+||||.+.+.+++.++++. .+++||+|++|........ .. ...-
T Consensus 130 ~~~~~~~~~~~~l~-~~-~-~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~ 206 (354)
T PRK04635 130 PLTADYQLPLDYIE-QL-D-GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNL 206 (354)
T ss_pred ecCCCCCCCHHHHH-hc-c-CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCE
Confidence 53 2567776 34 3 48999999999999999999999999876 3799999999865432111 11 1223
Q ss_pred EEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHH
Q 013019 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR-----GMKTLHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 350 iVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lr-----gL~tl~~Rl~~~~~nA~~Lae~L 424 (451)
+++.|+||+++.+| ++.|++++++++++.+......++ ++......+.. +.+.+..++++..++.+.+.+.|
T Consensus 207 iv~~S~SK~~~l~G-lRlG~~i~~~~~~~~l~~~~~~~~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L 283 (354)
T PRK04635 207 VVLRTLSKAFALAG-ARCGFTLANEELIEILMRVIAPYP--VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAAL 283 (354)
T ss_pred EEEechHHHhhhhH-HHHhhhhCCHHHHHHHHhhcCCCC--CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999998666 568999999999988876544333 22222222222 23445555666777788899999
Q ss_pred HcCCCeE
Q 013019 425 EAHPKVL 431 (451)
Q Consensus 425 ~~~p~V~ 431 (451)
++++++.
T Consensus 284 ~~~~~~~ 290 (354)
T PRK04635 284 SMYGGAK 290 (354)
T ss_pred HhCCCce
Confidence 9887653
No 105
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.86 E-value=5.3e-20 Score=190.25 Aligned_cols=216 Identities=18% Similarity=0.220 Sum_probs=153.3
Q ss_pred CCCchh-HHHHHHHHHhhh----C----C--CcEEEeCCHH-HHHHHHHHHHccCCCe--EEEcCCCCcchHHHHHHhhh
Q 013019 206 RYGNPT-TVVVEEKMSALE----G----A--ESTVIMASGM-SASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVLP 271 (451)
Q Consensus 206 R~~npt-~~~Lee~LA~l~----g----a--e~~vv~sSG~-aAi~~al~all~~GD~--VIv~~~~Y~~t~~~l~~~l~ 271 (451)
+|+.+. ...|++++++++ | . ++.+++++|+ +++..++.+++++||+ |++++|.|..... .+.
T Consensus 59 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~----~~~ 134 (393)
T TIGR03538 59 TYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEG----AAL 134 (393)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHH----HHH
Confidence 344443 456777777765 2 2 2356666665 8999999999999997 9999999987553 344
Q ss_pred cCCcEEEEeCC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc
Q 013019 272 KMGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ 341 (451)
Q Consensus 272 ~~Gi~v~~vd~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~ 341 (451)
..|+++..++. .|++++++++.+ ++|+|++++|+||||.+++ +++|+++|+++|++||+|++|......
T Consensus 135 ~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~ 213 (393)
T TIGR03538 135 LAGAEPYFLNCTAENGFLPDFDAVPESVWR-RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFD 213 (393)
T ss_pred hcCCeEEEeeccccCCCCCCHHHHHHHHhh-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccC
Confidence 56777666542 367889888866 4899999999999999987 778888999999999999998653221
Q ss_pred ---cc---c----cCC-----CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH--
Q 013019 342 ---KA---L----SLG-----ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-- 404 (451)
Q Consensus 342 ---~p---l----~~G-----aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~-- 404 (451)
.+ + ..+ ..+++.|+||.++.+| ++.||+++++++++++.......+...+...+..+...+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~G-lRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 292 (393)
T TIGR03538 214 EGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPG-LRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWNDE 292 (393)
T ss_pred CCCCCcCHHHhcccccccccccEEEEecchhhcCCcc-cceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcCh
Confidence 11 0 112 2388999999887776 6789999999999998877765555555555544433332
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHcC
Q 013019 405 -TLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 405 -tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
.+....+...++...+.+.|+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~L~~~ 316 (393)
T TIGR03538 293 QHVRENRALYREKFAAVLEILGQV 316 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 23333445556666677777654
No 106
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.86 E-value=1.3e-19 Score=183.15 Aligned_cols=214 Identities=19% Similarity=0.207 Sum_probs=169.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
.+|...++|+.|++++|.+++++++||++|+..++.++ +++||+|+++.+.|.++... +...|+++.+++.
T Consensus 16 ~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~ 91 (352)
T cd00616 16 LGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANA----ILLLGATPVFVDIDPDT 91 (352)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHH----HHHcCCeEEEEecCCCc
Confidence 46889999999999999999999999999999999988 68999999999999886543 3456888777653
Q ss_pred --CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc--ccccCCCcEEEECCc--
Q 013019 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KALSLGADLVLHSAT-- 356 (451)
Q Consensus 283 --~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~--~pl~~GaDiVv~S~S-- 356 (451)
.|++++++++++ ++++|+++ |++|.+.|+++|.++|+++|+++|+|++++.+... .++....|+.+.|++
T Consensus 92 ~~~d~~~l~~~i~~-~~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~ 167 (352)
T cd00616 92 YNIDPELIEAAITP-RTKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHPT 167 (352)
T ss_pred CCcCHHHHHHhcCc-CCeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCCC
Confidence 268999999976 48999974 57899999999999999999999999998754322 222223689999976
Q ss_pred ccCCccccceeEEEEeC-HHHHHHHHHHhHh---------------hCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 013019 357 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHV---------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRM 420 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~---------------~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~L 420 (451)
|+++++ .||+++.+ +++.++++..... +...+++..+.+.+..++.+....++..++++.+
T Consensus 168 K~~~~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~ 244 (352)
T cd00616 168 KNLTTG---EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAERY 244 (352)
T ss_pred CCCccc---CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999654 37877765 5787777654321 1123567777777777888888888889999999
Q ss_pred HHHHHcCCCeEE
Q 013019 421 AEILEAHPKVLL 432 (451)
Q Consensus 421 ae~L~~~p~V~~ 432 (451)
.+.|++.|+++.
T Consensus 245 ~~~L~~~~g~~~ 256 (352)
T cd00616 245 KELLADLPGIRL 256 (352)
T ss_pred HHHhcCCCCccC
Confidence 999999887753
No 107
>PLN02656 tyrosine transaminase
Probab=99.85 E-value=1.3e-19 Score=188.77 Aligned_cols=213 Identities=15% Similarity=0.139 Sum_probs=152.5
Q ss_pred hhHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 210 PTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 210 pt~~~Lee~LA~l~g--------ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
.....|+++++++++ .++.++++++++|+..++.+++++||+|++++|.|..... .....|+++..++
T Consensus 73 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~i~ 148 (409)
T PLN02656 73 VGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYEL----CAAFRHLEVRYVD 148 (409)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHH----HHHHcCCEEEEEe
Confidence 345667788877763 2455555566699999999999999999999999976432 2334577776664
Q ss_pred C-------CCHHHHHHhhcCCCeEEEEEeCCCCCccccc---cHHHHHHHHHhcCCEEEEecCCCCCCcc----ccc---
Q 013019 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL--- 344 (451)
Q Consensus 282 ~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~---DL~~IaelA~~~g~~lVVD~tfa~~~~~----~pl--- 344 (451)
. .|+++++++++++ +++|++++|+||||.+. ++++|+++|+++|++||+|++|...... .++
T Consensus 149 ~~~~~~~~~d~~~l~~~~~~~-~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 227 (409)
T PLN02656 149 LLPEKGWEVDLDAVEALADQN-TVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVF 227 (409)
T ss_pred CCCcCCCCCCHHHHHHHhccC-ceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHh
Confidence 3 3788999988764 89999999999999996 5888999999999999999998753211 111
Q ss_pred -cCCCcEEEECCcccCCccccceeEEEEeC--------HHHHHHHHHHhHhhCCCccHHHHHHHHHhhH-----HHHHHH
Q 013019 345 -SLGADLVLHSATKFIGGHNDVLAGSISGS--------GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRV 410 (451)
Q Consensus 345 -~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~--------~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~-----tl~~Rl 410 (451)
....-|++.|+||.++.+| .+.||++++ ++++++++......+ ..+...++.+...++ .+....
T Consensus 228 ~~~~~vi~~~SfSK~f~~pG-lRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~~~~~~~~~~~~ 305 (409)
T PLN02656 228 GSIVPVLTLGSLSKRWIVPG-WRLGWFVTTDPSGSFRDPKIVERIKKYFDILG-GPATFIQAAVPTILEQTDESFFKKTI 305 (409)
T ss_pred cccCcEEEEcccchhccCcc-eeEEEEEEeCcccccccHHHHHHHHHHHhhhc-CCCHHHHHHHHHHHhcCcHHHHHHHH
Confidence 1123478899999988877 678999873 578888877655433 334545444444443 244445
Q ss_pred HHHHHHHHHHHHHHHcCCC
Q 013019 411 QQQNSTALRMAEILEAHPK 429 (451)
Q Consensus 411 ~~~~~nA~~Lae~L~~~p~ 429 (451)
++..++...+.+.|++++.
T Consensus 306 ~~~~~~r~~~~~~L~~~~~ 324 (409)
T PLN02656 306 NILKQSSDICCDRIKEIPC 324 (409)
T ss_pred HHHHHHHHHHHHHHhhCCC
Confidence 5666777788888887654
No 108
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.85 E-value=1.5e-19 Score=182.72 Aligned_cols=212 Identities=21% Similarity=0.217 Sum_probs=162.2
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~L 288 (451)
.+...++++.|+++++.+..+++++|++++..++.+++++||+|++.++.|...... +...|.++..++..|+++|
T Consensus 60 ~~~~~~l~~~la~~~~~~~~i~~~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~l 135 (360)
T TIGR00858 60 SPLHEELEEELAEWKGTEAALLFSSGYLANVGVISALVGKGDLILSDALNHASLIDG----CRLSGARVRRYRHNDVEHL 135 (360)
T ss_pred cHHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHhCCCCCEEEEEccccHHHHHH----HHhcCCceEEecCCCHHHH
Confidence 366888999999999988899999999888878888899999999999999876533 3456788877777889999
Q ss_pred HHhhcCC---CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc-c--c------c-cCCCcEEEECC
Q 013019 289 EAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K--A------L-SLGADLVLHSA 355 (451)
Q Consensus 289 e~ai~~~---~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-~--p------l-~~GaDiVv~S~ 355 (451)
++.+++. ++++|++++++|++|...|+++|.++|+++|+++|+|+++..+... . + + ..+.|+++.|+
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 215 (360)
T TIGR00858 136 ERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTL 215 (360)
T ss_pred HHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEec
Confidence 9988642 3799999999999999999999999999999999999998643211 1 0 1 13678999999
Q ss_pred cccCCccccceeEEEEeCHHHHHHHHHHhHh--hCCCccHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHcCC
Q 013019 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 356 SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--~G~~ls~~~a~l~lrgL~---tl~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
||.+++. ||+++++++++++++..... .+...++.....+...++ .+..+.++..++.+.+.+.|++++
T Consensus 216 sK~~~~~----gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 289 (360)
T TIGR00858 216 SKALGSY----GAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG 289 (360)
T ss_pred hhhhhcc----CcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999874 48999999988887654332 223344444333333333 333455677788888888888763
No 109
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=3.3e-20 Score=189.09 Aligned_cols=214 Identities=15% Similarity=0.201 Sum_probs=157.3
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
+|+.+....|+++++++++. .+.+++++|. +++..++.+++++||+|++++|.|+.... .+...|.++..++.
T Consensus 60 ~~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~----~~~~~g~~~~~~~~~ 135 (359)
T PRK03158 60 LYPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRH----NAIIEGAEVREVPLK 135 (359)
T ss_pred cCCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHH----HHHHcCCeEEEEecC
Confidence 35556678899999999986 3455555555 89988888999999999999999987543 33455777766643
Q ss_pred ---CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHh--cCCEEEEecCCCCCCcc----ccc----cCCCc
Q 013019 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL----SLGAD 349 (451)
Q Consensus 283 ---~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~--~g~~lVVD~tfa~~~~~----~pl----~~GaD 349 (451)
.|++++++++++ ++++|++++|+||||.+.+.++|.++++. +|+++|+||+|...... ..+ ..+..
T Consensus 136 ~~~~d~~~l~~~~~~-~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v 214 (359)
T PRK03158 136 DGGHDLEAMLKAIDE-QTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENL 214 (359)
T ss_pred CCCcCHHHHHHhcCC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCE
Confidence 478999988876 48999999999999999999999999887 59999999998653221 111 12456
Q ss_pred EEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHc
Q 013019 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEA 426 (451)
Q Consensus 350 iVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~---tl~~Rl~~~~~nA~~Lae~L~~ 426 (451)
+++.|+||.++.+| ++.||++++++++++++..+..++ .+......+...++ .+....+...++.+.+.+.|++
T Consensus 215 i~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 291 (359)
T PRK03158 215 IVLRTFSKAYGLAA-LRVGYGIASEELIEKLNIARPPFN--TTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKE 291 (359)
T ss_pred EEEEechHhhcCcc-hhhehhcCCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999998776 678999999999998887665433 45555554444443 2333334445556667777877
Q ss_pred C
Q 013019 427 H 427 (451)
Q Consensus 427 ~ 427 (451)
+
T Consensus 292 ~ 292 (359)
T PRK03158 292 Y 292 (359)
T ss_pred C
Confidence 6
No 110
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.85 E-value=3.6e-20 Score=190.38 Aligned_cols=214 Identities=14% Similarity=0.203 Sum_probs=156.5
Q ss_pred cCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
++|+.+....|++.|+++++. .+.+++++|+ +++..++.+++++||+|++++|+|..... .+...|+++..++.
T Consensus 59 ~~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~----~~~~~g~~v~~v~~ 134 (366)
T PRK01533 59 ALYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRH----HAIIEGCEVKEVAL 134 (366)
T ss_pred CcCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHH----HHHHcCCEEEEeec
Confidence 346666677899999999986 4566666666 89999999999999999999999987553 34566888776653
Q ss_pred ----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHH---hcCCEEEEecCCCCCCcc----ccc----cCC
Q 013019 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH---KKGAIVCIDGTFATPLNQ----KAL----SLG 347 (451)
Q Consensus 283 ----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~---~~g~~lVVD~tfa~~~~~----~pl----~~G 347 (451)
.|+++|+++++++ +++|++++|+||||.+++.+++.++++ +++ ++|+||+|...... ..+ ..+
T Consensus 135 ~~~~~d~~~l~~~~~~~-~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~ 212 (366)
T PRK01533 135 NNGVYDLDEISSVVDND-TKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHK 212 (366)
T ss_pred CCCCcCHHHHHHHhCcC-CcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCC
Confidence 4789999998764 899999999999999998766666654 444 68889997642211 111 123
Q ss_pred CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHH
Q 013019 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 348 aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~---tl~~Rl~~~~~nA~~Lae~L 424 (451)
..|++.|+||.++.+| ++.||++++++++++++..+.. ..++.+...++...|+ .+....+...++.+.+.+.|
T Consensus 213 ~vi~~~SfSK~~~l~G-lRiG~~i~~~~~~~~l~~~~~~--~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l 289 (366)
T PRK01533 213 NILVLRTFSKAYGLAS-FRVGYAVGHEELIEKLNVVRLP--FNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFC 289 (366)
T ss_pred CEEEEeCchHHhcChH-HHHhHHhCCHHHHHHHHHhcCC--CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999999777 5789999999999999876543 3456666555555543 23333444556677777777
Q ss_pred HcC
Q 013019 425 EAH 427 (451)
Q Consensus 425 ~~~ 427 (451)
+.+
T Consensus 290 ~~~ 292 (366)
T PRK01533 290 KEN 292 (366)
T ss_pred HhC
Confidence 765
No 111
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.85 E-value=1.1e-19 Score=184.81 Aligned_cols=219 Identities=18% Similarity=0.256 Sum_probs=159.4
Q ss_pred ccCCCchh-HHHHHHHHHhhhC--------CCcEEEeCCHH-HHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhc
Q 013019 204 YGRYGNPT-TVVVEEKMSALEG--------AESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPK 272 (451)
Q Consensus 204 Y~R~~npt-~~~Lee~LA~l~g--------ae~~vv~sSG~-aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~ 272 (451)
+.+|+.+. ...|+++|+++++ .+..+++++|+ +++..++..+ .++||.|++++|+|......+ +.
T Consensus 37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~----~~ 112 (363)
T PF00155_consen 37 FLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAA----RL 112 (363)
T ss_dssp CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHH----HH
T ss_pred cccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccccccccceecCCccccccccc----cc
Confidence 34455554 7889999999988 34378888888 5555556566 569999999999999877544 45
Q ss_pred CCcEEEEeC-------CCCHHHHHHhhcCC-----CeEEEEEeCCCCCccccccHH---HHHHHHHhcCCEEEEecCCCC
Q 013019 273 MGITATVID-------PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFAT 337 (451)
Q Consensus 273 ~Gi~v~~vd-------~~D~d~Le~ai~~~-----~tklV~lesPsNPtG~v~DL~---~IaelA~~~g~~lVVD~tfa~ 337 (451)
.|+++..++ ..|+++|++.+++. ++++|++++|+||||.+.+.+ +|+++|+++|+++|+|++|..
T Consensus 113 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~ 192 (363)
T PF00155_consen 113 LGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSD 192 (363)
T ss_dssp TTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTT
T ss_pred cCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceec
Confidence 577766665 34899999988762 378999999999999998755 555559999999999999876
Q ss_pred CCcccc--------ccCCC-cEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh-----
Q 013019 338 PLNQKA--------LSLGA-DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----- 403 (451)
Q Consensus 338 ~~~~~p--------l~~Ga-DiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL----- 403 (451)
...... .+.+. .+++.|+||.++.+| ++.|++++++++++.++.....+.. +...+.++...+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-lRvG~i~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~ 269 (363)
T PF00155_consen 193 LIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPG-LRVGYIVAPPELIERLRRFQRSGLS--SSPMQAAAAAALSDPEL 269 (363)
T ss_dssp GBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGG-GTEEEEEEEHHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHH
T ss_pred cccCCCccCcccccccccccceeeeeccccccccc-cccccccchhhhhhhhhhccccccc--cchhhHHHHHhhhcccc
Confidence 543321 12233 489999999998776 5689999999999999987766544 333332222211
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHcCCCe
Q 013019 404 --KTLHLRVQQQNSTALRMAEILEAHPKV 430 (451)
Q Consensus 404 --~tl~~Rl~~~~~nA~~Lae~L~~~p~V 430 (451)
+.+..+.++..++.+.+.+.|++. ++
T Consensus 270 ~~~~~~~~~~~l~~~~~~l~~~L~~~-~~ 297 (363)
T PF00155_consen 270 VEKWLEELRERLRENRDLLREALEEI-GI 297 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT-TS
T ss_pred cccccccchhhHHHHHHHHHHHHHHh-hh
Confidence 255667778888899999999877 44
No 112
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=6.9e-20 Score=188.44 Aligned_cols=220 Identities=14% Similarity=0.194 Sum_probs=155.2
Q ss_pred cCCCchhHHHHHHHHHhhhC--------C-CcEEEeCCHH-HHHHHHHHHHccCCC-eEEEcCCCCcchHHHHHHhhhcC
Q 013019 205 GRYGNPTTVVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGG-HIVTTTDCYRKTRIFIETVLPKM 273 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~g--------a-e~~vv~sSG~-aAi~~al~all~~GD-~VIv~~~~Y~~t~~~l~~~l~~~ 273 (451)
.+|+.+....|+++|+++++ . .+.|++++|+ +++..++.+++.+|| +|++++|+|..... .++..
T Consensus 61 ~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~----~~~~~ 136 (374)
T PRK02610 61 NRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYGI----LAQTL 136 (374)
T ss_pred cCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHH----HHHHc
Confidence 45566667789999999886 2 2346666666 888888888888886 89999999987553 44566
Q ss_pred CcEEEEeC------CCCHHHHHHhhcC---CCeEEEEEeCCCCCccccccHHHHHHHHHh-cCCEEEEecCCCCCCcccc
Q 013019 274 GITATVID------PADMEGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKA 343 (451)
Q Consensus 274 Gi~v~~vd------~~D~d~Le~ai~~---~~tklV~lesPsNPtG~v~DL~~IaelA~~-~g~~lVVD~tfa~~~~~~p 343 (451)
|+++..++ ..|+++|++++++ .++++|++++|+||||.+++.+++.++++- +|++||+||+|........
T Consensus 137 g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~ 216 (374)
T PRK02610 137 GIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTL 216 (374)
T ss_pred CCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccch
Confidence 77776664 2368899988864 359999999999999999987766666532 4899999999875422111
Q ss_pred ---cc-CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHHH
Q 013019 344 ---LS-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNST 416 (451)
Q Consensus 344 ---l~-~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~n 416 (451)
+. ...-+++.|+||.++.+| ++.||+++++++++++...+..++ ++.....++...+ +.+..++++..+.
T Consensus 217 ~~~~~~~~~~ivi~SfSK~~g~~G-lRiG~~v~~~~l~~~l~~~~~~~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 293 (374)
T PRK02610 217 VGELAQHPNWVILRTFSKAFRLAA-HRVGYAIGHPELIAVLEKVRLPYN--LPSFSQLAAQLALEHRQELLAAIPEILQE 293 (374)
T ss_pred HHHHhcCCCEEEEEecchhccCcc-cceeeeecCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 11 112488999999998877 678999999999999887764333 3444444333333 3333445555556
Q ss_pred HHHHHHHHHcCCCeE
Q 013019 417 ALRMAEILEAHPKVL 431 (451)
Q Consensus 417 A~~Lae~L~~~p~V~ 431 (451)
...+.+.|++++++.
T Consensus 294 r~~l~~~L~~~~~~~ 308 (374)
T PRK02610 294 RDRLYQALQELPQLR 308 (374)
T ss_pred HHHHHHHHHhCCCcE
Confidence 667788888776653
No 113
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.85 E-value=1.6e-19 Score=186.64 Aligned_cols=218 Identities=16% Similarity=0.172 Sum_probs=158.0
Q ss_pred hHHHHHHHHHhhhCCC--cEEE-eCCHHHHHHHHHHHH----ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 211 TTVVVEEKMSALEGAE--STVI-MASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 211 t~~~Lee~LA~l~gae--~~vv-~sSG~aAi~~al~al----l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
..+.+++.+++++|.+ +.++ ++++++++..++.++ +++||+|+++++.|.+.+..+...++..|+++.+++.
T Consensus 61 ~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~ 140 (398)
T TIGR03392 61 RYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIG 140 (398)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecC
Confidence 3567899999999973 3454 555669999998887 4789999999999988665555566778999888753
Q ss_pred ----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECCcc
Q 013019 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 357 (451)
Q Consensus 283 ----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~SK 357 (451)
.|+++++++++++ |++|++++|+||||.+.|+++|.++|+++|+++++|++++.+.. .....+++|+++.|++|
T Consensus 141 ~~~~~~~~~l~~~i~~~-t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K 219 (398)
T TIGR03392 141 ADLLPDIRQLPELLTPR-TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHK 219 (398)
T ss_pred CCCCcCHHHHHHHhccC-ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEeccc
Confidence 3789999999875 99999999999999999999999999999999999999865422 22234679999999999
Q ss_pred cCCccccceeEEEEeCHHHHHHHHHHhH---------------------hhCCCccHHHHHHHHHhhHHH-----HHHHH
Q 013019 358 FIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HLRVQ 411 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~~eli~~lr~~~~---------------------~~G~~ls~~~a~l~lrgL~tl-----~~Rl~ 411 (451)
.++..| .|+++.++++++++..... .-.++.+......+..+++.+ ....+
T Consensus 220 ~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~ 296 (398)
T TIGR03392 220 LYGPTG---IGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEA 296 (398)
T ss_pred ccCCCc---eEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 887655 7899999888776643210 001122222222222333332 12234
Q ss_pred HHHHHHHHHHHHHHcCCCeEE
Q 013019 412 QQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~~p~V~~ 432 (451)
+..+.+..+.+.|++.|+++.
T Consensus 297 ~~~~l~~~l~~~l~~l~g~~~ 317 (398)
T TIGR03392 297 WSVSLADLAEERLAQLPGFRS 317 (398)
T ss_pred HHHHHHHHHHHHHhcCCCeEE
Confidence 455667788888888887753
No 114
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.85 E-value=2.5e-19 Score=184.37 Aligned_cols=220 Identities=16% Similarity=0.216 Sum_probs=155.1
Q ss_pred ccCCCchh-HHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 204 YGRYGNPT-TVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 204 Y~R~~npt-~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
+..|+.+. ...|++++++++|. ++.+++++|++++..++.+++.+||+|+++++.|.... ..+...|.++..+
T Consensus 59 ~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v 134 (380)
T PRK06225 59 YCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIID----NFASRFGAEVIEV 134 (380)
T ss_pred CCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHHhCceEEee
Confidence 34455554 67899999999986 45666777779999999999999999999999998644 3345567776655
Q ss_pred CC--------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc----ccc
Q 013019 281 DP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----ALS 345 (451)
Q Consensus 281 d~--------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~----pl~ 345 (451)
+. .|+++++++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....... .+.
T Consensus 135 ~~~~~~~~~~~d~~~l~~~~~~~-~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 213 (380)
T PRK06225 135 PIYSEECNYKLTPELVKENMDEN-TRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYA 213 (380)
T ss_pred ccccccCCccCCHHHHHhhcCCC-ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcC
Confidence 42 3789999998874 899999999999999874 8899999999999999999974321111 111
Q ss_pred CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH---HHHHHHH-HHHHHHHHHH
Q 013019 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQ-QQNSTALRMA 421 (451)
Q Consensus 346 ~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~---tl~~Rl~-~~~~nA~~La 421 (451)
....+++.|+||+++.+| ++.|+++++++++++++..... ....+...+..+...++ .+..++. ...++...+.
T Consensus 214 ~~~~i~~~s~SK~~g~~G-~RiG~i~~~~~l~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~ 291 (380)
T PRK06225 214 PEHTVTSYSFSKIFGMAG-LRIGAVVATPDLIEVVKSIVIN-DLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIK 291 (380)
T ss_pred CCCEEEEeechhhcCCcc-ceeEEEecCHHHHHHHHHHHhc-ccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 134688899999997565 6789999999999888765421 12233443333333332 2222332 2345566677
Q ss_pred HHHHcCCCe
Q 013019 422 EILEAHPKV 430 (451)
Q Consensus 422 e~L~~~p~V 430 (451)
+.|++.+++
T Consensus 292 ~~L~~~~~~ 300 (380)
T PRK06225 292 EAVDEIEGV 300 (380)
T ss_pred HHHHhCcCC
Confidence 788876654
No 115
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.85 E-value=4.6e-19 Score=183.02 Aligned_cols=210 Identities=15% Similarity=0.121 Sum_probs=166.2
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-----
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----- 282 (451)
.|.++++|+.++++.|.+++++++||++|+..++.++ +++||+||+++++|.++...+ ...|.++.++|.
T Consensus 30 g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~----~~~G~~~v~vd~d~~~~ 105 (376)
T TIGR02379 30 GPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF----VLRGAKIVFVDIRPDTM 105 (376)
T ss_pred cHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEecCCCcC
Confidence 5778999999999999999999999999999998887 899999999999998876433 456888888764
Q ss_pred -CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC--CccccccCCCcEEEECCc--c
Q 013019 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--LNQKALSLGADLVLHSAT--K 357 (451)
Q Consensus 283 -~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~--~~~~pl~~GaDiVv~S~S--K 357 (451)
.|++++++++++ ++++|+ |+||+|...|+++|.++|+++|++||+|++++.+ +..+++....|+.++|++ |
T Consensus 106 ~~d~~~le~~i~~-~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K 181 (376)
T TIGR02379 106 NIDETLIESAITH-RTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFHETK 181 (376)
T ss_pred CCCHHHHHHhcCc-CceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCcccCCCCCEEEEeCCCCC
Confidence 368899999987 499986 6889999999999999999999999999997654 333333322488888864 4
Q ss_pred cCCccccceeEEEEeC-HHHHHHHHHHhHh-------------------hC--CCccHHHHHHHHHhhHHHHHHHHHHHH
Q 013019 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV-------------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNS 415 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~-------------------~G--~~ls~~~a~l~lrgL~tl~~Rl~~~~~ 415 (451)
.+...+ .||+++.+ +++.++++.++.. .| ..++...|.+++..|+.++...++..+
T Consensus 182 ~l~~g~--~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~ 259 (376)
T TIGR02379 182 NYTSGG--EGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRLA 259 (376)
T ss_pred cCcccC--CceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHHH
Confidence 454321 37776665 7888888866531 12 224566777778889999999999999
Q ss_pred HHHHHHHHHHcCC
Q 013019 416 TALRMAEILEAHP 428 (451)
Q Consensus 416 nA~~Lae~L~~~p 428 (451)
+++.+.+.|.+.+
T Consensus 260 ~~~~y~~~L~~~~ 272 (376)
T TIGR02379 260 TWQLYQDALKPLE 272 (376)
T ss_pred HHHHHHHHhccCC
Confidence 9999999988765
No 116
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.85 E-value=5.3e-19 Score=177.45 Aligned_cols=254 Identities=20% Similarity=0.202 Sum_probs=182.6
Q ss_pred cCCccccCCCccCCHHHHHHHHhc--ccCCccccCCCch-hHHHHHHHHHhhhCC---CcEEEeC-CHHHHHHHHHHHHc
Q 013019 174 TTPVVNTSAYFFKKTAELIDFKEK--RRASFEYGRYGNP-TTVVVEEKMSALEGA---ESTVIMA-SGMSASTVMLLALV 246 (451)
Q Consensus 174 ~~Pi~~sst~~~~~~~~~~~~~~~--~~~~~~Y~R~~np-t~~~Lee~LA~l~ga---e~~vv~s-SG~aAi~~al~all 246 (451)
..|+..+. ..|+...++.+.... +++.|.|+ +.+. ..+++.++..+.++- ++.++++ +.+-++..+++++.
T Consensus 27 vlPmWVAD-MDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T 104 (388)
T COG1168 27 VLPMWVAD-MDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT 104 (388)
T ss_pred cceeeeec-ccCCCCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC
Confidence 34666665 566777666554332 35668898 5554 788889999988873 3445555 45599999999999
Q ss_pred cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC--------CCCHHHHHHhhcCCCeEEEEEeCCCCCccccc---cH
Q 013019 247 PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--------PADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DV 315 (451)
Q Consensus 247 ~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd--------~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~---DL 315 (451)
++||.|++..|.|.+.+..+. ..|-++...+ ..|.++||+++.+.+++++++|+|+||+|++. +|
T Consensus 105 ~~gd~Vvi~tPvY~PF~~~i~----~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL 180 (388)
T COG1168 105 KPGDGVVIQTPVYPPFYNAIK----LNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEEL 180 (388)
T ss_pred cCCCeeEecCCCchHHHHHHh----hcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHH
Confidence 999999999999999886553 3344443332 13899999999877689999999999999997 48
Q ss_pred HHHHHHHHhcCCEEEEecCCCCCCccc----c---cc-CCC--cEEEECCcccCCccccceeEEEEeCHHHHHHHH-HHh
Q 013019 316 KLVSDLCHKKGAIVCIDGTFATPLNQK----A---LS-LGA--DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR-NLH 384 (451)
Q Consensus 316 ~~IaelA~~~g~~lVVD~tfa~~~~~~----p---l~-~Ga--DiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr-~~~ 384 (451)
.+|.+||.+||+.||.||.++..+... + +. ..+ -|++.|.||.++..|...+-+|+.++++.++.. ++.
T Consensus 181 ~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~ 260 (388)
T COG1168 181 RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLK 260 (388)
T ss_pred HHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHH
Confidence 889999999999999999987643211 1 11 112 378889999999888555666777887755543 333
Q ss_pred HhhCCCccHHHHH----HHHHhhHHHHHHHHHHHHHHHHHHHHHHcC-CCeEEE
Q 013019 385 HVLGGALNPNAAY----LIIRGMKTLHLRVQQQNSTALRMAEILEAH-PKVLLL 433 (451)
Q Consensus 385 ~~~G~~ls~~~a~----l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~-p~V~~V 433 (451)
......++.+... +-..|-.+|..-++-...|...++++|.++ |+|+-.
T Consensus 261 ~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~ 314 (388)
T COG1168 261 RNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVT 314 (388)
T ss_pred HhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEe
Confidence 3333444444321 123577788888888889999999999876 777543
No 117
>PRK08912 hypothetical protein; Provisional
Probab=99.85 E-value=1.4e-19 Score=186.67 Aligned_cols=217 Identities=18% Similarity=0.221 Sum_probs=154.3
Q ss_pred cCCCchh-HHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCC
Q 013019 205 GRYGNPT-TVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (451)
Q Consensus 205 ~R~~npt-~~~Lee~LA~l~----ga----e-~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~G 274 (451)
.+|+.+. ..+|++++++++ |. + +.++++++++++..++.+++++||+|++++|.|..... .++..|
T Consensus 57 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g 132 (387)
T PRK08912 57 NQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP----LIRRAG 132 (387)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH----HHHHcC
Confidence 3455443 456777777764 32 3 44555555699999999999999999999999987553 345667
Q ss_pred cEEEEeCC------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----
Q 013019 275 ITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (451)
Q Consensus 275 i~v~~vd~------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~---- 341 (451)
+++..++. .|++++++.+.+ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|......
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 211 (387)
T PRK08912 133 GVPRLVRLEPPHWRLPRAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRH 211 (387)
T ss_pred CEEEEEecCcccCcCCHHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCC
Confidence 77665542 368999998876 4899999999999999986 677899999999999999998542211
Q ss_pred ccc----c-CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh----HHHHHHHHH
Q 013019 342 KAL----S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQ 412 (451)
Q Consensus 342 ~pl----~-~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL----~tl~~Rl~~ 412 (451)
.++ . .+.++++.|+||.++.+| .+.|++++++++++.++......+...++.....+...+ +.+....++
T Consensus 212 ~~~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 290 (387)
T PRK08912 212 IPLMTLPGMRERTVKIGSAGKIFSLTG-WKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRAD 290 (387)
T ss_pred cChhhCCCccCceEEEeechhhccCcC-ceeEEEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHH
Confidence 111 1 235799999999998676 678999999999998887665544333433333322222 233333455
Q ss_pred HHHHHHHHHHHHHcC
Q 013019 413 QNSTALRMAEILEAH 427 (451)
Q Consensus 413 ~~~nA~~Lae~L~~~ 427 (451)
..++.+.+.+.|+++
T Consensus 291 ~~~~~~~l~~~L~~~ 305 (387)
T PRK08912 291 LARSRDRLAAGLRRI 305 (387)
T ss_pred HHHHHHHHHHHHHhC
Confidence 667778888888876
No 118
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.85 E-value=1.9e-19 Score=193.04 Aligned_cols=218 Identities=13% Similarity=0.165 Sum_probs=147.1
Q ss_pred CCchh-HHHHHHHHHhhh------CC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEE
Q 013019 207 YGNPT-TVVVEEKMSALE------GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (451)
Q Consensus 207 ~~npt-~~~Lee~LA~l~------ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v 277 (451)
|+.+. ...|++.|++++ +. .+.|++++|+ +++..++.+++++||+|++++|.|..... .+...|.++
T Consensus 181 Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~----~~~~~g~~~ 256 (517)
T PRK13355 181 YSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTA----CVNLAGGTA 256 (517)
T ss_pred CCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHH----HHHHCCCEE
Confidence 44443 677888888877 32 3445666655 89999999999999999999999987553 334557666
Q ss_pred EEeCC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-----c
Q 013019 278 TVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----K 342 (451)
Q Consensus 278 ~~vd~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~-----~ 342 (451)
..++. .|+++|+++++++ +++|++++|+||||.+++ +++|+++|++||++||+||+|...... .
T Consensus 257 v~~~~~~~~~~~~d~~~l~~~~~~~-~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s 335 (517)
T PRK13355 257 VHYRCDEQSEWYPDIDDIRSKITSR-TKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTS 335 (517)
T ss_pred EEeecCcccCCCCCHHHHHHhcCcC-ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCccc
Confidence 55432 4789999999874 999999999999999997 788999999999999999998653211 1
Q ss_pred cccCCCc---EEEECCcccCCccccceeEEEE--eCHHHH----HHHHHHhHhhCCCccHHHHHHHHHhhH------HHH
Q 013019 343 ALSLGAD---LVLHSATKFIGGHNDVLAGSIS--GSGKLV----TQIRNLHHVLGGALNPNAAYLIIRGMK------TLH 407 (451)
Q Consensus 343 pl~~GaD---iVv~S~SK~l~G~gdv~gG~Iv--~~~eli----~~lr~~~~~~G~~ls~~~a~l~lrgL~------tl~ 407 (451)
...+..+ +++.|+||.++.+| .+.||++ ++++++ +.+..... ...+.+....+++...|+ ...
T Consensus 336 ~~~~~~~~~vi~~~S~SK~~~~~G-~RiG~~i~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~aL~~~~~~~~~~ 413 (517)
T PRK13355 336 IASLAPDLFCVTFSGLSKSHMIAG-YRIGWMILSGNKRIAKDYIEGLNMLAN-MRLCSNVPAQSIVQTALGGHQSVKDYL 413 (517)
T ss_pred HHHhCCCCeEEEEecchhhccCcc-cceEEEEeeCchhhHHHHHHHHHHHhc-CcCCcChHHHHHHHHHhcCCccHHHHH
Confidence 1122122 44689999998776 4678887 445443 33332222 222344444444433332 111
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCeE
Q 013019 408 LRVQQQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 408 ~Rl~~~~~nA~~Lae~L~~~p~V~ 431 (451)
....+..++...+.+.|++.|++.
T Consensus 414 ~~~~~~~~~r~~l~~~L~~~~g~~ 437 (517)
T PRK13355 414 VPGGRVYEQRELVYNALNAIPGIS 437 (517)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcc
Confidence 223345556777888898876653
No 119
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.85 E-value=1.1e-19 Score=184.08 Aligned_cols=208 Identities=19% Similarity=0.243 Sum_probs=148.2
Q ss_pred cCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCC
Q 013019 205 GRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD 284 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D 284 (451)
.||+.+. ..|+++|++.+|.++.++++++.+++..++ .+.+||+|++++|+|.... ..++..|+++..++.
T Consensus 45 ~~yp~~~-~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~----~~~~~~g~~~~~v~~-- 115 (330)
T PRK05664 45 ARLPETD-DGLEAAARAYYGAPQLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHA----HAWRRAGHQVRELDE-- 115 (330)
T ss_pred HhCCCCh-HHHHHHHHHHhCCCCEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHH----HHHHHcCCeEEEech--
Confidence 3455555 789999999999875554444448887765 4589999999999998865 345567888887764
Q ss_pred HHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcccc---cc-CCCcEEEECCcc
Q 013019 285 MEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA---LS-LGADLVLHSATK 357 (451)
Q Consensus 285 ~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~p---l~-~GaDiVv~S~SK 357 (451)
++++++++ +++++++++|+||||.+++ +++|+++|+++|++||+||+|.......+ +. ...-+++.|+||
T Consensus 116 -~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK 192 (330)
T PRK05664 116 -AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGK 192 (330)
T ss_pred -hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccc
Confidence 45666664 3789999999999999987 45566667889999999999864322111 11 112488999999
Q ss_pred cCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHcC
Q 013019 358 FIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~---tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
.++.+| ++.||+++++++++.++.....++ ++....+++...|. ......++..++...+.+.|+++
T Consensus 193 ~~gl~G-lRiG~~v~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 262 (330)
T PRK05664 193 FFGLAG-ARLGFVLAEPALLRALAELLGPWT--VSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH 262 (330)
T ss_pred cccCCC-cceEEEEeCHHHHHHHHHhcCCCC--CCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 998776 678999999999999887654332 34444444444443 23333455566778888888876
No 120
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.85 E-value=1.6e-19 Score=188.84 Aligned_cols=223 Identities=18% Similarity=0.188 Sum_probs=156.7
Q ss_pred CCccccCC--CchhHHHHHH----HHHhhhCCCcEEE-eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhc
Q 013019 200 ASFEYGRY--GNPTTVVVEE----KMSALEGAESTVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK 272 (451)
Q Consensus 200 ~~~~Y~R~--~npt~~~Lee----~LA~l~gae~~vv-~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~ 272 (451)
.++.++|+ |+|+.+.||+ ++++++|.+.+++ ++||+.|+.+++.+++++||+|++++..|+++...- .....
T Consensus 58 ~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g-~~~~~ 136 (416)
T PRK13034 58 EGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHG-AKVSL 136 (416)
T ss_pred CCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecC-Cccee
Confidence 45677887 7899999999 9999999999966 589999999999999999999999999998742110 00000
Q ss_pred CCcEE--EEeC------CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC-----C
Q 013019 273 MGITA--TVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-----L 339 (451)
Q Consensus 273 ~Gi~v--~~vd------~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~-----~ 339 (451)
.+... ..++ ..|++++++.++..++++|+++.+. +|...|+++|.++|+++|+++++|++++.+ .
T Consensus 137 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~ 214 (416)
T PRK13034 137 SGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELDFARFREIADEVGALLMVDMAHIAGLVAAGE 214 (416)
T ss_pred ccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--cccccCHHHHHHHHHHcCCEEEEeCcccccCcccCC
Confidence 11111 1222 2688999988854458999986655 578889999999999999999999996543 3
Q ss_pred ccccccCCCcEEEECCcccCCccccceeEEEEeCHHH-HHHHHHHhHhhC---CCccHHHHHHHHHhhHHH----HHHHH
Q 013019 340 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLG---GALNPNAAYLIIRGMKTL----HLRVQ 411 (451)
Q Consensus 340 ~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~el-i~~lr~~~~~~G---~~ls~~~a~l~lrgL~tl----~~Rl~ 411 (451)
...++. ++|++++|++|+++|+. ||+++++++. .++++... ..| ....+..+.+.+..++.+ ..+.+
T Consensus 215 ~~~~~~-~~Di~~~s~~K~l~g~~---GG~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~ 289 (416)
T PRK13034 215 HPNPFP-HAHVVTTTTHKTLRGPR---GGMILTNDEEIAKKINSAV-FPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAK 289 (416)
T ss_pred CCCCCC-CceEEEEeCcccCCCCC---CeEEEECcHHHHHHHHhhc-CCcccCCccHHHHHHHHHHHHHHhChhHHHHHH
Confidence 233443 58999999999998875 7888886654 44444432 222 122333333332222222 33468
Q ss_pred HHHHHHHHHHHHHHcCCCeE
Q 013019 412 QQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~~p~V~ 431 (451)
+..+|++++++.|++. ++.
T Consensus 290 ~l~~~a~~l~~~L~~~-G~~ 308 (416)
T PRK13034 290 QVIANAQALAEVLKER-GYD 308 (416)
T ss_pred HHHHHHHHHHHHHHHc-CCE
Confidence 8889999999999876 443
No 121
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.85 E-value=1.7e-19 Score=185.06 Aligned_cols=218 Identities=21% Similarity=0.240 Sum_probs=169.0
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-----
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----- 282 (451)
.+..++||+++++++|.+.++.++||+.|+.+++.++ +++||+|+++..+|..+... +...|.++.++|.
T Consensus 24 g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~a----i~~~G~~pv~~Di~~~~~ 99 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASA----ILWAGAEPVFVDIDPETL 99 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHH----HHHTT-EEEEE-BETTTS
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHH----HHHhccEEEEEeccCCcC
Confidence 5889999999999999999999999999999999998 68999999999999887743 4457999999884
Q ss_pred -CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC--ccccccCCCcEEEECC--cc
Q 013019 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVLHSA--TK 357 (451)
Q Consensus 283 -~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~--~~~pl~~GaDiVv~S~--SK 357 (451)
.|+++++++++++ |++|++ .+..|...|+++|.++|+++|++||.|.+.+.+. ..++...-.|+.++|| +|
T Consensus 100 ~id~~~~~~~i~~~-t~ai~~---~h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~~~K 175 (363)
T PF01041_consen 100 NIDPEALEKAITPK-TKAILV---VHLFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFHPTK 175 (363)
T ss_dssp SB-HHHHHHHHHTT-EEEEEE---E-GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESSTTS
T ss_pred CcCHHHHHHHhccC-ccEEEE---ecCCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecCCCCC
Confidence 3799999999985 999986 6778999999999999999999999999977653 3333222259999997 69
Q ss_pred cCCccccceeEEEEeCH-HHHHHHHHHhHh---------------hC--CCccHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 013019 358 FIGGHNDVLAGSISGSG-KLVTQIRNLHHV---------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNSTALR 419 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~---------------~G--~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~ 419 (451)
.+.... ||+|++++ ++.++++.++.. .| ..++++.|.+++..|+.++.++++..+++..
T Consensus 176 ~i~~ge---GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~ 252 (363)
T PF01041_consen 176 IITTGE---GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQR 252 (363)
T ss_dssp SS-SSS----EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCcCCC---CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 986553 89988864 677777765531 11 3478889999999999999999999999999
Q ss_pred HHHHHHcCCCeEEEecCC
Q 013019 420 MAEILEAHPKVLLLFITL 437 (451)
Q Consensus 420 Lae~L~~~p~V~~V~yPg 437 (451)
+.+.|.+.+.+.....+.
T Consensus 253 y~~~L~~~~~~~~~~~~~ 270 (363)
T PF01041_consen 253 YREALAGIPGIKPPPIPD 270 (363)
T ss_dssp HHHHHTTGTTEEEEGCGT
T ss_pred HHHHHhcCCCcccccccc
Confidence 999999999886654443
No 122
>PRK07683 aminotransferase A; Validated
Probab=99.85 E-value=4e-19 Score=183.57 Aligned_cols=213 Identities=14% Similarity=0.180 Sum_probs=153.3
Q ss_pred chhHHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEE
Q 013019 209 NPTTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (451)
Q Consensus 209 npt~~~Lee~LA~l~----ga----e-~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~ 279 (451)
.+....|++.+++++ |. + +.++++++++|+..++.+++++||+|++++|+|..+...+ ...|+++.+
T Consensus 64 ~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~ 139 (387)
T PRK07683 64 NAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPII----RLCGAKPVF 139 (387)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHH----HHcCCEEEE
Confidence 344567888888876 32 3 4455555569999999999999999999999999865433 456888777
Q ss_pred eCCC------CHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc---c-ccC
Q 013019 280 IDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A-LSL 346 (451)
Q Consensus 280 vd~~------D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~---p-l~~ 346 (451)
++.. |.+++++.++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....... + ..+
T Consensus 140 ~~~~~~~~~~~~~~l~~~~~~~-~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 218 (387)
T PRK07683 140 IDTRSTGFRLTAEALENAITEK-TRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHF 218 (387)
T ss_pred eecCcccCCCCHHHHHHhcCcC-ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhc
Confidence 7532 568899988764 899999999999999875 7889999999999999999987543211 1 111
Q ss_pred ----CCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh----HHHHHHHHHHHHHHH
Q 013019 347 ----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTAL 418 (451)
Q Consensus 347 ----GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL----~tl~~Rl~~~~~nA~ 418 (451)
+-.+++.|+||.++.+| ++.||+++++++++++...........+...+..+...+ ..+....++..++..
T Consensus 219 ~~~~~~vi~~~s~SK~~~~pG-lRiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 297 (387)
T PRK07683 219 PEMREKTIVINGLSKSHSMTG-WRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRD 297 (387)
T ss_pred cCCcCCeEEEeeccccccCcc-ceeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 24588999999998776 689999999999998887654333334444433333333 223333445566777
Q ss_pred HHHHHHHcC
Q 013019 419 RMAEILEAH 427 (451)
Q Consensus 419 ~Lae~L~~~ 427 (451)
.+.+.|.++
T Consensus 298 ~~~~~l~~~ 306 (387)
T PRK07683 298 YVYNRLISM 306 (387)
T ss_pred HHHHHHHHc
Confidence 788888764
No 123
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.85 E-value=2e-19 Score=186.43 Aligned_cols=215 Identities=15% Similarity=0.134 Sum_probs=149.9
Q ss_pred chhHHHHHHHHHhhhC-------CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 209 NPTTVVVEEKMSALEG-------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 209 npt~~~Lee~LA~l~g-------ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
.+....|+++++++++ .++.++++++++++..++.+++++||+|++++|.|.... ..+...|+++..++
T Consensus 72 ~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~----~~~~~~g~~v~~~~ 147 (401)
T TIGR01264 72 TVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYE----TLAESMGIEVKLYN 147 (401)
T ss_pred CCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHH----HHHHHcCCEEEEee
Confidence 3445678888888876 244555555669999999999999999999999998654 34456677776653
Q ss_pred C-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----ccc-cC
Q 013019 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-SL 346 (451)
Q Consensus 282 ~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~pl-~~ 346 (451)
. .|+++++++++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .++ .+
T Consensus 148 ~~~~~~~~~d~~~l~~~~~~~-~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 226 (401)
T TIGR01264 148 LLPDKSWEIDLKQLESLIDEK-TAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASL 226 (401)
T ss_pred cCCccCCCCCHHHHHHHhccC-ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHc
Confidence 2 4789999988764 899999999999999985 788999999999999999998653211 111 11
Q ss_pred ---CCcEEEECCcccCCccccceeEEEEeCH------HHHHHHHHHhHhhCCCccHHHHHHHHHhh-----HHHHHHHHH
Q 013019 347 ---GADLVLHSATKFIGGHNDVLAGSISGSG------KLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQ 412 (451)
Q Consensus 347 ---GaDiVv~S~SK~l~G~gdv~gG~Iv~~~------eli~~lr~~~~~~G~~ls~~~a~l~lrgL-----~tl~~Rl~~ 412 (451)
+-.+++.|+||.++.+| ++.||+++++ ++++.++..... ....+......+...| +.+....++
T Consensus 227 ~~~~~vi~~~SfSK~~~~~G-lRiG~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~ 304 (401)
T TIGR01264 227 SSTVPILSCGGLAKRWLVPG-WRLGWIIIHDRRGILRDIRDGLVKLSQR-ILGPCTIVQGALPSILLRTPQEYFDGTLSV 304 (401)
T ss_pred CCCCcEEEEccCcccCCCcc-ceEEEEEecCcchhHHHHHHHHHHHhhc-cCCCCcHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 12478999999988777 6789988763 344444443321 1223333333333333 234444566
Q ss_pred HHHHHHHHHHHHHcCCCe
Q 013019 413 QNSTALRMAEILEAHPKV 430 (451)
Q Consensus 413 ~~~nA~~Lae~L~~~p~V 430 (451)
..++.+.+.+.|+++|++
T Consensus 305 ~~~~r~~l~~~L~~~~~~ 322 (401)
T TIGR01264 305 LESNAMLCYGALAAVPGL 322 (401)
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 667778888999887654
No 124
>PLN02368 alanine transaminase
Probab=99.85 E-value=3.6e-19 Score=185.69 Aligned_cols=221 Identities=14% Similarity=0.164 Sum_probs=152.4
Q ss_pred CCCchh-HHHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHHc-cCCCeEEEcCCCCcchHHHHHHhhhcCCc
Q 013019 206 RYGNPT-TVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (451)
Q Consensus 206 R~~npt-~~~Lee~LA~l~----ga---e~~vv~sSG~-aAi~~al~all-~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi 275 (451)
+|+.+. ...|++.|++++ |. ++.+++++|. +++..++.+++ ++||+|++++|+|......+ ...|.
T Consensus 102 ~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~----~~~g~ 177 (407)
T PLN02368 102 AYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATI----SLLGG 177 (407)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHH----HHcCC
Confidence 344332 346777777665 52 3455566655 89999999988 79999999999999866443 44566
Q ss_pred EEEEeC-------CCCHHHHHHhhcC-----CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc
Q 013019 276 TATVID-------PADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN 340 (451)
Q Consensus 276 ~v~~vd-------~~D~d~Le~ai~~-----~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~ 340 (451)
++..++ ..|+++|++++++ .++++|++++|+||||.+++ +++|+++|++||++||+||+|.....
T Consensus 178 ~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y 257 (407)
T PLN02368 178 TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIY 257 (407)
T ss_pred EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcccccccc
Confidence 655542 2478999998863 14899999999999999986 56788889999999999999865432
Q ss_pred -c----cc-c----c-------CCCcEEEECCcccC-CccccceeEEEE---eCHHHHHHHHHHhHhhCCCccHHHHHHH
Q 013019 341 -Q----KA-L----S-------LGADLVLHSATKFI-GGHNDVLAGSIS---GSGKLVTQIRNLHHVLGGALNPNAAYLI 399 (451)
Q Consensus 341 -~----~p-l----~-------~GaDiVv~S~SK~l-~G~gdv~gG~Iv---~~~eli~~lr~~~~~~G~~ls~~~a~l~ 399 (451)
. .+ . . .+.-|+++|+||.+ +.+| .+.||++ +++++++++...... ..+.+....+++
T Consensus 258 ~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~G-lRiGy~i~~~~~~~li~~~~~~~~~-~~~~~~~~Q~aa 335 (407)
T PLN02368 258 QDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECG-QRGGYFEMTNIPPKTVEEIYKVASI-ALSPNVSGQIFM 335 (407)
T ss_pred CCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCc-cceEEEEEeCCCHHHHHHHHHHhcc-cCCCCcHHHHHH
Confidence 1 11 0 1 11348889999998 5555 5688888 488899888876432 223444444444
Q ss_pred HHhhH--------------HHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 013019 400 IRGMK--------------TLHLRVQQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 400 lrgL~--------------tl~~Rl~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
...++ .+...++...+++..+.+.|++.|++..
T Consensus 336 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~ 382 (407)
T PLN02368 336 GLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVC 382 (407)
T ss_pred HHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEe
Confidence 43332 1122345667778889999999887644
No 125
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.85 E-value=3.3e-19 Score=185.15 Aligned_cols=216 Identities=16% Similarity=0.150 Sum_probs=153.2
Q ss_pred chhHHHHHHHHHhhhCC--------CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 209 NPTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 209 npt~~~Lee~LA~l~ga--------e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
......|++.++++++. ++.+++++|++|+..++.+++.+||+|++++|.|.... ..+...|+++..+
T Consensus 72 ~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~ 147 (403)
T TIGR01265 72 SVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYD----TRAAFSGLEVRLY 147 (403)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHH----HHHHHcCCEEEEe
Confidence 34456788888888763 44566666679999999999999999999999998644 3345567777765
Q ss_pred CC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc----cc-c
Q 013019 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL-S 345 (451)
Q Consensus 281 d~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~----pl-~ 345 (451)
+. .|+++++++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....... ++ .
T Consensus 148 ~~~~~~~~~~d~~~l~~~~~~~-~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 226 (403)
T TIGR01265 148 DLLPEKDWEIDLDGLEALADEK-TVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMAS 226 (403)
T ss_pred cCCcccCCccCHHHHHHHhCcC-ccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhh
Confidence 42 3689999988764 899999999999999986 8889999999999999999987543211 11 1
Q ss_pred C---CCcEEEECCcccCCccccceeEEEEeC-H-H-----HHHHHHHHhHhhCCCccHHHHHHHHHhh-----HHHHHHH
Q 013019 346 L---GADLVLHSATKFIGGHNDVLAGSISGS-G-K-----LVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRV 410 (451)
Q Consensus 346 ~---GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~-e-----li~~lr~~~~~~G~~ls~~~a~l~lrgL-----~tl~~Rl 410 (451)
+ .--+++.|+||.++.+| ++.||+++. + + +++.+...... ....+.+.+..+...+ +.+....
T Consensus 227 ~~~~~~vi~~~S~SK~~~~pG-lRiG~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 304 (403)
T TIGR01265 227 FASIVPVLSLGGISKRWVVPG-WRLGWIIIHDPHGIFRDTVLQGLKNLLQR-ILGPATIVQGALPDILENTPQEFFDGKI 304 (403)
T ss_pred hccCCcEEEEeecccccCCCc-ceEEEEEEeCchhhhHHHHHHHHHHHhhh-hcCCChHHHHHHHHHHHhChHHHHHHHH
Confidence 1 12478899999988877 678888763 2 3 33334433321 2233444444433333 2344456
Q ss_pred HHHHHHHHHHHHHHHcCCCeE
Q 013019 411 QQQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 411 ~~~~~nA~~Lae~L~~~p~V~ 431 (451)
++..++...+.+.|+++|++.
T Consensus 305 ~~~~~~~~~l~~~L~~~~~~~ 325 (403)
T TIGR01265 305 SVLKSNAELCYEELKDIPGLV 325 (403)
T ss_pred HHHHHHHHHHHHHHhcCCCce
Confidence 667788888999999887664
No 126
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.85 E-value=2e-19 Score=187.80 Aligned_cols=167 Identities=19% Similarity=0.266 Sum_probs=135.4
Q ss_pred hHHHHHHHHHhhhCCC--cEEE-eCCHHHHHHHHHHH----HccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 211 TTVVVEEKMSALEGAE--STVI-MASGMSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 211 t~~~Lee~LA~l~gae--~~vv-~sSG~aAi~~al~a----ll~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
..+++++.|++++|.+ +.++ ++++++++..++.+ .+++||+|+++++.|++.+..+....+..|+++.+++.
T Consensus 77 ~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~ 156 (424)
T PLN02855 77 AYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLT 156 (424)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecC
Confidence 3568899999999972 3455 45556888888765 36889999999999998776666667778998887753
Q ss_pred ----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECCcc
Q 013019 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 357 (451)
Q Consensus 283 ----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~SK 357 (451)
.|++++++++++ ++++|++++|+||||.+.|+++|.++|+++|+++++|++++.+.. .+..++|+|+++.|++|
T Consensus 157 ~~~~~~~~~l~~~i~~-~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 235 (424)
T PLN02855 157 PDEVLDVEQLKELLSE-KTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHK 235 (424)
T ss_pred CCCCcCHHHHHHHhcc-CceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeeccc
Confidence 378999999987 499999999999999999999999999999999999999865422 23335689999999999
Q ss_pred cCCccccceeEEEEeCHHHHHHHH
Q 013019 358 FIGGHNDVLAGSISGSGKLVTQIR 381 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~~eli~~lr 381 (451)
+++++| .|+++.++++++++.
T Consensus 236 ~~gp~G---~G~l~~~~~~~~~~~ 256 (424)
T PLN02855 236 MCGPTG---IGFLWGKSDLLESMP 256 (424)
T ss_pred ccCCCc---cEEEEEchhhhhcCC
Confidence 766554 789999988877654
No 127
>PRK10534 L-threonine aldolase; Provisional
Probab=99.85 E-value=2.5e-19 Score=180.73 Aligned_cols=217 Identities=17% Similarity=0.220 Sum_probs=154.9
Q ss_pred ccCC-CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCC-cEEEEeC
Q 013019 204 YGRY-GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG-ITATVID 281 (451)
Q Consensus 204 Y~R~-~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~G-i~v~~vd 281 (451)
..+| ++|...+|+++|++++|.+..+++++|++++..++.+++.+||+|+++.+.|...+... .....+ +++..++
T Consensus 27 ~~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 104 (333)
T PRK10534 27 DDVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLYEAG--GAAVLGSIQPQPID 104 (333)
T ss_pred CcccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhcCCCCeeEEechhhhhHhcCC--chHHhcCceEEeec
Confidence 3456 78999999999999999988899999999999888899999999999887774322110 011222 4444442
Q ss_pred -----CCCHHHHHHhhcCC-----CeEEEEEeCCCCCccccccHH---HHHHHHHhcCCEEEEecCCCCCC----c--cc
Q 013019 282 -----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPL----N--QK 342 (451)
Q Consensus 282 -----~~D~d~Le~ai~~~-----~tklV~lesPsNPtG~v~DL~---~IaelA~~~g~~lVVD~tfa~~~----~--~~ 342 (451)
..|+++|+++++++ ++++|++++|+ +|.+.+++ +|.++|+++|++|++||+|.... . ..
T Consensus 105 ~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~ 182 (333)
T PRK10534 105 AAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELK 182 (333)
T ss_pred CCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHH
Confidence 23789999998652 48999999876 49988765 55678899999999999854210 0 01
Q ss_pred cccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCcc--HHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 013019 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN--PNAAYLIIRGMKTLHLRVQQQNSTALRM 420 (451)
Q Consensus 343 pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls--~~~a~l~lrgL~tl~~Rl~~~~~nA~~L 420 (451)
.+..+.|.++.|+||.++.. +||+++++++++++++..+..++..++ ...+......|+....++++..++++++
T Consensus 183 ~~~~~~~~~~~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l 259 (333)
T PRK10534 183 EITQYCDSFTICLSKGLGTP---VGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWL 259 (333)
T ss_pred HHHhcCCEEEEEeEcCCCCc---ccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 11123576777999988764 466888999999999988876664433 2334444455555455666777778899
Q ss_pred HHHHHcC
Q 013019 421 AEILEAH 427 (451)
Q Consensus 421 ae~L~~~ 427 (451)
.+.|+++
T Consensus 260 ~~~L~~~ 266 (333)
T PRK10534 260 AEQLREA 266 (333)
T ss_pred HHHHHhC
Confidence 9999986
No 128
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=1.1e-19 Score=186.74 Aligned_cols=215 Identities=16% Similarity=0.274 Sum_probs=153.9
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC--
Q 013019 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-- 281 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd-- 281 (451)
+|+.+....|+++||++++. ++.|++++|. +++..++.+++++||+|++++|+|......+ ...|.++..++
T Consensus 63 ~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~----~~~g~~~~~vp~~ 138 (369)
T PRK08153 63 KYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHV----AGFGGRLVTVPYR 138 (369)
T ss_pred cCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHH----HHcCCeEEEeeCC
Confidence 35555577899999999986 3566677776 8888888888999999999999998755333 33566665543
Q ss_pred --CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHh--cCCEEEEecCCCCCCcc---cccc--CCCcEEE
Q 013019 282 --PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ---KALS--LGADLVL 352 (451)
Q Consensus 282 --~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~--~g~~lVVD~tfa~~~~~---~pl~--~GaDiVv 352 (451)
..|++++++.+...++++|++++|+||||.+.+.+++.++++. +|++||+||+|...... .++. ....+++
T Consensus 139 ~~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~ 218 (369)
T PRK08153 139 DDREDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRM 218 (369)
T ss_pred CCCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEE
Confidence 3467888776654458999999999999999998887777764 38999999998643221 1111 1234889
Q ss_pred ECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHcC
Q 013019 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 353 ~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~---tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
.|+||.++.+| ++.||+++++++++.+...+..++ +++..++.+...++ .+....+...++...+.+.|+++
T Consensus 219 ~SfSK~~g~~G-lRiG~~v~~~~~~~~l~~~~~~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~ 293 (369)
T PRK08153 219 RTFSKAYGLAG-ARVGYAIGAPGTIKAFDKVRNHFG--MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN 293 (369)
T ss_pred ecchHhccCcc-hheeeeecCHHHHHHHHHhhcCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999998666 678999999999998887665443 45665555444443 23333444556666777777765
No 129
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.85 E-value=3.2e-19 Score=184.54 Aligned_cols=211 Identities=14% Similarity=0.152 Sum_probs=151.3
Q ss_pred HHHHHHHHHhhh----CC-----CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 212 TVVVEEKMSALE----GA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 212 ~~~Lee~LA~l~----ga-----e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
...|++.+++++ |. ++.+++++|++|+.+++.+++++||+|++++|.|++.... ++..|+++..++.
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~----~~~~g~~~~~~~~ 144 (391)
T PRK07309 69 LLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPI----VNLVGAEIVEIDT 144 (391)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHH----HHHcCCEEEEEec
Confidence 566777777765 32 2455555666999999999999999999999999986543 3456777766642
Q ss_pred ------CCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----cc-cc-
Q 013019 283 ------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA-LS- 345 (451)
Q Consensus 283 ------~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~p-l~- 345 (451)
.|+++|++++++ .++++|++++|+||||.+.+ +++|.++|++||+++|+|++|...... .+ ..
T Consensus 145 ~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~ 224 (391)
T PRK07309 145 TENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY 224 (391)
T ss_pred CCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHh
Confidence 368899988864 24899999999999999875 888999999999999999998753321 11 11
Q ss_pred -CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH----HHHHHHHHHHHHHHH
Q 013019 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRM 420 (451)
Q Consensus 346 -~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t----l~~Rl~~~~~nA~~L 420 (451)
....+++.|+||.++.+| ++.|+++++++++++++..........+......+...++. .....++..++...+
T Consensus 225 ~~~~~i~~~S~SK~~g~~G-lRvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 303 (391)
T PRK07309 225 LPDQTILINGLSKSHAMTG-WRIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYI 303 (391)
T ss_pred ccCCEEEEecChhhccCcc-ceeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHH
Confidence 123488999999998776 67999999999999988765443334455544444444432 212233445666677
Q ss_pred HHHHHcC
Q 013019 421 AEILEAH 427 (451)
Q Consensus 421 ae~L~~~ 427 (451)
.+.|+++
T Consensus 304 ~~~l~~~ 310 (391)
T PRK07309 304 IEKMTDL 310 (391)
T ss_pred HHHHHHC
Confidence 7888775
No 130
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.85 E-value=5.4e-20 Score=187.35 Aligned_cols=191 Identities=15% Similarity=0.227 Sum_probs=144.9
Q ss_pred cCCCchhHHHHHHHHHhhhCC--CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
.+|+.+...+|++.+++++|. ++.+++++|+ +++..++.+++++||+|++++|.|.... ..++..|+++..++
T Consensus 64 ~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~----~~~~~~g~~~~~~~ 139 (361)
T PRK00950 64 HRYPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYE----ISAKAHGAKPVYAK 139 (361)
T ss_pred cCCCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEee
Confidence 456667778999999999986 3344447887 6788888888899999999999887643 33456688877664
Q ss_pred -----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc--ccc--cCCCcEEE
Q 013019 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KAL--SLGADLVL 352 (451)
Q Consensus 282 -----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~--~pl--~~GaDiVv 352 (451)
..|++++++++++ ++++|++++|+||||.+.++++|.++|+++|+++|+|++|...... .++ .....+++
T Consensus 140 ~~~~~~~~~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~ 218 (361)
T PRK00950 140 REEDFSLDVDSVLNAITE-KTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIG 218 (361)
T ss_pred cCCCCCcCHHHHHHHhcc-CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEE
Confidence 3468899998876 4899999999999999999999999999999999999998643211 111 11234788
Q ss_pred ECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh
Q 013019 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM 403 (451)
Q Consensus 353 ~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL 403 (451)
.|+||.++.+| ++.|++++++++++.++.....++ ++......+...+
T Consensus 219 ~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~l 266 (361)
T PRK00950 219 RTFSKVFGLAG-LRIGYGFVPEWLIDYYMRAKTPFS--LTRLSQAAAIAAL 266 (361)
T ss_pred EeehHhhcCch-hhcchhcCCHHHHHHHHHhcCCCC--CCHHHHHHHHHHh
Confidence 99999998776 678999999999988887665443 3444444444443
No 131
>PRK09082 methionine aminotransferase; Validated
Probab=99.85 E-value=2.4e-19 Score=185.03 Aligned_cols=210 Identities=18% Similarity=0.168 Sum_probs=151.6
Q ss_pred HHHHHHHHHhhhCC----CcEEEe-CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 212 TVVVEEKMSALEGA----ESTVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 212 ~~~Lee~LA~l~ga----e~~vv~-sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
++++.+.+.+++|. +..+++ ++|++|+..++.+++.+||+|++++|.|......+ +..|.++..++.
T Consensus 73 r~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~----~~~g~~~~~~~~~~~~ 148 (386)
T PRK09082 73 REAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAI----ELAGGRAVRVALQPPD 148 (386)
T ss_pred HHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHH----HHcCCEEEEEecCccc
Confidence 45566666666664 224555 55569999999999999999999999999865433 445777666653
Q ss_pred --CCHHHHHHhhcCCCeEEEEEeCCCCCccccc---cHHHHHHHHHhcCCEEEEecCCCCCCc-c----cccc----CCC
Q 013019 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN-Q----KALS----LGA 348 (451)
Q Consensus 283 --~D~d~Le~ai~~~~tklV~lesPsNPtG~v~---DL~~IaelA~~~g~~lVVD~tfa~~~~-~----~pl~----~Ga 348 (451)
.|+++++++++++ +++|++++|+||||.+. ++++|.++|+++|+++|+|++|..... . .... ...
T Consensus 149 ~~~d~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~ 227 (386)
T PRK09082 149 FRVDWQRFAAAISPR-TRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRER 227 (386)
T ss_pred ccCCHHHHHHhcCcc-ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCc
Confidence 3788999999774 89999999999999884 688999999999999999999864321 1 1111 134
Q ss_pred cEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHH
Q 013019 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 349 DiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~----tl~~Rl~~~~~nA~~Lae~L 424 (451)
.+++.|+||.++.+| ++.|++++++++++.++..........+...+..+...++ .+....+...++...+.+.|
T Consensus 228 ~i~~~S~SK~~~~~G-~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L 306 (386)
T PRK09082 228 AFVVSSFGKTYHVTG-WKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAAL 306 (386)
T ss_pred EEEEeechhhccchh-hhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Confidence 588999999998776 6789999999999998887655444455554443333332 23333445567777888888
Q ss_pred HcC
Q 013019 425 EAH 427 (451)
Q Consensus 425 ~~~ 427 (451)
+++
T Consensus 307 ~~~ 309 (386)
T PRK09082 307 ANS 309 (386)
T ss_pred HhC
Confidence 764
No 132
>PRK03321 putative aminotransferase; Provisional
Probab=99.85 E-value=4.6e-20 Score=187.58 Aligned_cols=215 Identities=18% Similarity=0.250 Sum_probs=159.1
Q ss_pred cCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~gae-~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
.+|+.+....|++.++++++.+ +.+++++|+ +++..++..++++||+|+++.+.|..... .++..|.++..++.
T Consensus 52 ~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~----~~~~~g~~~~~v~~ 127 (352)
T PRK03321 52 NRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPI----LVQVAGATPVQVPL 127 (352)
T ss_pred CcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHH----HHHHcCCEEEEccC
Confidence 4456677889999999999863 466777777 67777888889999999999998875432 34556777776654
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHh--cCCEEEEecCCCCCCcc----cccc----CC
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KALS----LG 347 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~--~g~~lVVD~tfa~~~~~----~pl~----~G 347 (451)
.|++++++++++ ++++|++++|+||||.+.+.++|.++|++ +|+++|+|++|...... .++. ..
T Consensus 128 ~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 206 (352)
T PRK03321 128 TPDHTHDLDAMAAAITD-RTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHP 206 (352)
T ss_pred CCCCCCCHHHHHHhhcc-CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCC
Confidence 368999999877 48999999999999999999999999987 59999999998643221 1111 12
Q ss_pred CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHH
Q 013019 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 348 aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrg---L~tl~~Rl~~~~~nA~~Lae~L 424 (451)
-.+++.|+||.++.+| ++.|++++++++++.++.... ....+.....++... .+.+..++++..++...+.+.|
T Consensus 207 ~vi~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~~~~--~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L 283 (352)
T PRK03321 207 NVVVLRTFSKAYGLAG-LRVGYAVGHPEVIAALRKVAV--PFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAAL 283 (352)
T ss_pred CEEEEecchHHhhhHH-HhhhhhcCCHHHHHHHHHhcC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478899999998665 678999999999998887543 233455554433333 3445555666666667788888
Q ss_pred HcC
Q 013019 425 EAH 427 (451)
Q Consensus 425 ~~~ 427 (451)
+++
T Consensus 284 ~~~ 286 (352)
T PRK03321 284 RAA 286 (352)
T ss_pred HHC
Confidence 875
No 133
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.84 E-value=2.3e-19 Score=186.27 Aligned_cols=219 Identities=16% Similarity=0.169 Sum_probs=158.2
Q ss_pred hhHHHHHHHHHhhhCC--CcEEEeCC-HHHHHHHHHHH----HccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 210 PTTVVVEEKMSALEGA--ESTVIMAS-GMSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~ga--e~~vv~sS-G~aAi~~al~a----ll~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
...++++++|++++|. ++.+++++ +++++..++.+ ++++||+|+++++.|.+.+..+...++..|+++..++.
T Consensus 67 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 146 (406)
T PRK09295 67 EKMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPL 146 (406)
T ss_pred HHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEec
Confidence 4466789999999986 34555554 55888888776 46889999999999988766665666778998888753
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECCc
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~S 356 (451)
.|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+++++|++++.+.. .+..++|+|+++.|++
T Consensus 147 ~~~~~~d~~~l~~~i~~~-t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~ 225 (406)
T PRK09295 147 NPDGTLQLETLPALFDER-TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGH 225 (406)
T ss_pred CCCCCCCHHHHHHhcCCC-cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEeehh
Confidence 3789999999874 99999999999999999999999999999999999999876532 2222468999999999
Q ss_pred ccCCccccceeEEEEeCHHHHHHHHHHhH----------------------hhCCCccHHHHHHHHHhhHHHH-----HH
Q 013019 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH----------------------VLGGALNPNAAYLIIRGMKTLH-----LR 409 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~~eli~~lr~~~~----------------------~~G~~ls~~~a~l~lrgL~tl~-----~R 409 (451)
|+++++| .|+++.++++++++..... ...++.+....+.+..+++.+. ..
T Consensus 226 K~~gp~G---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i 302 (406)
T PRK09295 226 KLYGPTG---IGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNI 302 (406)
T ss_pred hccCCCC---cEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHH
Confidence 9777665 6899988887766532100 0111233323333333343322 22
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEE
Q 013019 410 VQQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 410 l~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
.++..+.+..+.+.|++.++++.
T Consensus 303 ~~~~~~l~~~l~~~l~~~~~~~~ 325 (406)
T PRK09295 303 AEYEQNLMHYALSQLESVPDLTL 325 (406)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEE
Confidence 34444567778888888887744
No 134
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.84 E-value=2.9e-19 Score=183.43 Aligned_cols=212 Identities=17% Similarity=0.192 Sum_probs=159.6
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHH
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~ 287 (451)
-.+.+++++++++++.|.+..+++++|++++..++.+++++||.|+++++.|+..... +...|+++..++..|+++
T Consensus 76 ~~~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~ 151 (385)
T TIGR01825 76 TLRLHEELEEKLAKFKKTEAALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDG----LRLTKATKKIYKHADMDD 151 (385)
T ss_pred CcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHH----HHhcCCceEEeCCCCHHH
Confidence 3567889999999999988889999999999989999999999999999999876432 233567776677778888
Q ss_pred HHHhhcCC---CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc---------ccccCCCcEEEECC
Q 013019 288 LEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLVLHSA 355 (451)
Q Consensus 288 Le~ai~~~---~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~---------~pl~~GaDiVv~S~ 355 (451)
+++.+++. ++++|+++++.||+|.+.++++|.++|++||+++|+|++|+.+... -....+.|+++.|+
T Consensus 152 l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 231 (385)
T TIGR01825 152 LDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTL 231 (385)
T ss_pred HHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEec
Confidence 88877532 4899999999999999999999999999999999999998654221 11234678999999
Q ss_pred cccCCccccceeEEEEeCHHHHHHHHHHhH--hhCCCccHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 013019 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 356 SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--~~G~~ls~~~a~l~lrgL~tl---~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
||++++. +|++++++++++.+..... ..+...++...+.+..+++.+ ....++..++.+.+.+.|++.
T Consensus 232 sK~~~~~----gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 304 (385)
T TIGR01825 232 SKAIGVV----GGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL 304 (385)
T ss_pred cHHhhcC----CCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 9999764 5899999999888876532 223333444444444444433 223455566677777777664
No 135
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.84 E-value=3.8e-19 Score=185.31 Aligned_cols=212 Identities=12% Similarity=0.105 Sum_probs=144.6
Q ss_pred hHHHHHHHHHhhhC------C-CcEEEeCCH-HHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 211 TTVVVEEKMSALEG------A-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 211 t~~~Lee~LA~l~g------a-e~~vv~sSG-~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
....|+++|+++++ . ++.+++++| ++++..++.+++++||+|++++|.|...... +...|+++..++.
T Consensus 75 G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~----~~~~g~~~~~~~~ 150 (409)
T PLN00143 75 GILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETY----AIFHHLEIRHFDL 150 (409)
T ss_pred CCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHH----HHHcCCEEEEEec
Confidence 34567777777762 1 234445555 5999999999999999999999999886533 3445777665532
Q ss_pred -------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----cccc-C-
Q 013019 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS-L- 346 (451)
Q Consensus 283 -------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~pl~-~- 346 (451)
.|+++|+++++++ ++++++++|+||||.+++ +++|+++|+++|+++|+|++|...... .++. +
T Consensus 151 ~~~~~~~~d~~~l~~~~~~~-~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~ 229 (409)
T PLN00143 151 LPEKGWEVDLDAVEAIADEN-TIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFA 229 (409)
T ss_pred cCCCCCcCCHHHHHHhcccC-CEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhc
Confidence 3789999988764 899999999999999987 677888899999999999998754221 1111 1
Q ss_pred --CCcEEEECCcccCCccccceeEEEEe-CH-HHH------HHHHHHhHhhCCCccHHHHHHHHHhh-----HHHHHHHH
Q 013019 347 --GADLVLHSATKFIGGHNDVLAGSISG-SG-KLV------TQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQ 411 (451)
Q Consensus 347 --GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~-eli------~~lr~~~~~~G~~ls~~~a~l~lrgL-----~tl~~Rl~ 411 (451)
..-+++.|+||.++.+| .+.||+++ ++ .++ +.++..... ....+......+...| ..+...++
T Consensus 230 ~~~~vi~~~SfSK~f~~pG-lRvG~~v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~ 307 (409)
T PLN00143 230 SIVPVITLGSISKRWMIPG-WGLGWLVTCDPSGLLQICEIADSIKKALNP-APFPPTFIQAAIPEILEKTTEDFFSKTIN 307 (409)
T ss_pred ccCcEEEEccchhhcCCCc-cceEEEEeeCchhhhhhHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcChHHHHHHHHH
Confidence 12488999999998887 67888887 33 343 223322221 1112333333333333 24555566
Q ss_pred HHHHHHHHHHHHHHcCCC
Q 013019 412 QQNSTALRMAEILEAHPK 429 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~~p~ 429 (451)
+..++.+.+.+.|++++.
T Consensus 308 ~~~~~~~~~~~~L~~~~~ 325 (409)
T PLN00143 308 ILRAALAFCYDKLKEIPC 325 (409)
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 677777778888877653
No 136
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.84 E-value=3.7e-19 Score=183.70 Aligned_cols=213 Identities=14% Similarity=0.176 Sum_probs=151.0
Q ss_pred hHHHHHHHHHhhhC-------CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 211 TTVVVEEKMSALEG-------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 211 t~~~Lee~LA~l~g-------ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
....|+++++++++ .++.+++++|++|+..++.+++++||+|++++|.|..... .++..|+++..++.
T Consensus 67 g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~ 142 (397)
T PRK07568 67 GIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNG----FATSAGVKIVPVTTK 142 (397)
T ss_pred CCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHH----HHHHcCCEEEEeecC
Confidence 35678888888762 2455666666799999999999999999999999986543 34456777666542
Q ss_pred -------CCHHHHHHhhcCCCeEEEEEeCCCCCccccc---cHHHHHHHHHhcCCEEEEecCCCCCCcc-----ccccC-
Q 013019 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALSL- 346 (451)
Q Consensus 283 -------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~---DL~~IaelA~~~g~~lVVD~tfa~~~~~-----~pl~~- 346 (451)
.++++|+++++++ +++|++++|+||||.+. ++++|+++|+++|+++|+|++|...... ....+
T Consensus 143 ~~~g~~~~~~~~l~~~~~~~-~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~ 221 (397)
T PRK07568 143 IEEGFHLPSKEEIEKLITPK-TKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLE 221 (397)
T ss_pred cccCCCCCCHHHHHHhcCcc-ceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcC
Confidence 2468899988764 89999999999999998 4788999999999999999998643211 11111
Q ss_pred ---CCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH----HHHHHHHHHHHHHH
Q 013019 347 ---GADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTAL 418 (451)
Q Consensus 347 ---GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~----tl~~Rl~~~~~nA~ 418 (451)
...+++.|+||.++.+| .+.|++++ ++++++++...... ....+...+..+...++ .+....+...++..
T Consensus 222 ~~~~~~i~~~S~SK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 299 (397)
T PRK07568 222 GLEDRVIIIDSVSKRYSACG-ARIGCLISKNKELIAAAMKLCQA-RLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRD 299 (397)
T ss_pred CCcCCEEEEecchhhccCCC-cceEEEecCCHHHHHHHHHHhhc-cCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 23488999999998776 57888887 46788776654332 22334444333333332 23334455667788
Q ss_pred HHHHHHHcCCCe
Q 013019 419 RMAEILEAHPKV 430 (451)
Q Consensus 419 ~Lae~L~~~p~V 430 (451)
.+.+.|++++++
T Consensus 300 ~l~~~L~~~~~~ 311 (397)
T PRK07568 300 ILYEELNKIPGV 311 (397)
T ss_pred HHHHHHhcCCCc
Confidence 888999887665
No 137
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.84 E-value=3.1e-19 Score=183.31 Aligned_cols=211 Identities=18% Similarity=0.177 Sum_probs=158.6
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHH
Q 013019 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLE 289 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le 289 (451)
+.++++++++++++|.++.+++++|++++..++.+++++||+|+++++.|.+....+ ...+.++..++..|+++++
T Consensus 87 ~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~d~~~l~ 162 (397)
T PRK06939 87 DLHKELEEKLAKFLGTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGV----RLCKAKRYRYANNDMADLE 162 (397)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHH----HhcCCceEEeCCCCHHHHH
Confidence 567889999999999888999999999999999999999999999999998765433 3345565566667888888
Q ss_pred HhhcC---C--CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc---------cccCCCcEEEECC
Q 013019 290 AALNN---N--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLHSA 355 (451)
Q Consensus 290 ~ai~~---~--~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~---------pl~~GaDiVv~S~ 355 (451)
+++++ . ++++|++++..|++|.+.++++|.++|+++|++||+|++|..++... .+..+.|+++.|+
T Consensus 163 ~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~ 242 (397)
T PRK06939 163 AQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTL 242 (397)
T ss_pred HHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEEC
Confidence 88753 1 48899988889999999999999999999999999999986432211 1112468999999
Q ss_pred cccCCccccceeEEEEeCHHHHHHHHHHhH--hhCCCccHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 013019 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 356 SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--~~G~~ls~~~a~l~lrgL~tl---~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
||+++|. ++|++++++++++.++.... .++....+..+..+...++.+ ....++..++.+.+.+.|+++
T Consensus 243 sK~~~g~---r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 316 (397)
T PRK06939 243 GKALGGA---SGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAA 316 (397)
T ss_pred HHHhCcc---CceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 9999764 47999999999988876432 223333444344333344433 334556667777888888765
No 138
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.84 E-value=3.3e-19 Score=182.21 Aligned_cols=221 Identities=16% Similarity=0.197 Sum_probs=157.8
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 210 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae---~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
+...++++.|++++|.+ +.+++++|++++..++.+++++||+|++..+.|+++...+....+..|+++..++.
T Consensus 44 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 123 (376)
T TIGR01977 44 REVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEG 123 (376)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCC
Confidence 56778999999999963 34555677799999999999999999999999988776665566667888887753
Q ss_pred -CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECCcccCC
Q 013019 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIG 360 (451)
Q Consensus 283 -~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~SK~l~ 360 (451)
.|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......|+|+++.|++|+++
T Consensus 124 ~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~ 202 (376)
T TIGR01977 124 LISPERIKRAIKT-NTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLL 202 (376)
T ss_pred CcCHHHHHHhcCC-CCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEeccccccc
Confidence 378999999977 499999999999999999999999999999999999999875532 22234689999999999998
Q ss_pred ccccceeEEEEeCHHHHHHHHHHh----------------HhhCCCccHHHHHHHHHhhHHH-----HHHHHHHHHHHHH
Q 013019 361 GHNDVLAGSISGSGKLVTQIRNLH----------------HVLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALR 419 (451)
Q Consensus 361 G~gdv~gG~Iv~~~eli~~lr~~~----------------~~~G~~ls~~~a~l~lrgL~tl-----~~Rl~~~~~nA~~ 419 (451)
++.. .|++++.++..+..+.... +...++.+....+.+..+++.+ ....+++.+.++.
T Consensus 203 ~p~g-~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~ 281 (376)
T TIGR01977 203 GPQG-TGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEK 281 (376)
T ss_pred CCCC-ceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 7652 2344444443222111100 0001122222222223344333 2234566778888
Q ss_pred HHHHHHcCCCeEE
Q 013019 420 MAEILEAHPKVLL 432 (451)
Q Consensus 420 Lae~L~~~p~V~~ 432 (451)
+.+.|++.++++-
T Consensus 282 ~~~~l~~~~~~~~ 294 (376)
T TIGR01977 282 LLNGLREINKVKI 294 (376)
T ss_pred HHHHHhcCCCeEE
Confidence 8899988887643
No 139
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.84 E-value=2.2e-19 Score=185.68 Aligned_cols=219 Identities=20% Similarity=0.220 Sum_probs=159.0
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHH----ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 210 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae---~~vv~sSG~aAi~~al~al----l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
...+++++.+++++|.+ +.++++++++++..++.++ +++||+|+++++.|.+....+.......|+++++++.
T Consensus 62 ~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~ 141 (403)
T TIGR01979 62 EAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPL 141 (403)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEec
Confidence 34568889999999974 3455555668888887764 5789999999999998766666666678988887753
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECCc
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~S 356 (451)
.|+++++++++++ +++|++.+|+||+|.+.|+++|.++|+++|+++++|++++.+.. .+..++++|+++.|++
T Consensus 142 ~~~~~~~~~~l~~~i~~~-~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~ 220 (403)
T TIGR01979 142 DDDGTLDLDDLEKLLTEK-TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGH 220 (403)
T ss_pred CCCCCCCHHHHHHHhccC-CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEecc
Confidence 3789999999874 99999999999999999999999999999999999999876532 2333568999999999
Q ss_pred ccCCccccceeEEEEeCHHHHHHHHHHhH---------------------hhCCCccHHHHHHHHHhhHHH-----HHHH
Q 013019 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HLRV 410 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~~eli~~lr~~~~---------------------~~G~~ls~~~a~l~lrgL~tl-----~~Rl 410 (451)
|++++.| .|+++.+++++++++.... ...++.+....+.+..+++.+ ....
T Consensus 221 K~~gp~G---~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~ 297 (403)
T TIGR01979 221 KMYGPTG---IGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIE 297 (403)
T ss_pred cccCCCC---ceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHH
Confidence 9887555 7899888887776542110 001122222222223333322 2234
Q ss_pred HHHHHHHHHHHHHHHcCCCeEE
Q 013019 411 QQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 411 ~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
++..+.++.+.+.|++.++++-
T Consensus 298 ~~~~~l~~~l~~~l~~~~g~~~ 319 (403)
T TIGR01979 298 AHEHELTAYALERLGEIPGLRI 319 (403)
T ss_pred HHHHHHHHHHHHHHhcCCCEEE
Confidence 5556667778888888887743
No 140
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=1.3e-19 Score=184.02 Aligned_cols=213 Identities=17% Similarity=0.212 Sum_probs=154.2
Q ss_pred cccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 203 EYGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 203 ~Y~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
.+.+|+.+....|+++++++++. .+.+++++|+ +++..++..+ +||+|++++|.|+... ......|+++..+
T Consensus 48 ~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~----~~~~~~g~~~~~v 121 (337)
T PRK03967 48 PFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF--EGKHIVITPPTFGMYS----FYAKLNGIPVIDV 121 (337)
T ss_pred ccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--CCCeEEEeCCChHHHH----HHHHHcCCeEEEe
Confidence 36677777778899999999985 3566666666 7887766655 7999999999997533 2345567777766
Q ss_pred CC-----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcccc---cc-CCCcEE
Q 013019 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---LS-LGADLV 351 (451)
Q Consensus 281 d~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~p---l~-~GaDiV 351 (451)
+. .|++.+++++ + +++++++++|+||||.+.+.++|.++++ +|+++|+|++|........ .. ..--++
T Consensus 122 ~~~~~~~~d~~~l~~~~-~-~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~ 198 (337)
T PRK03967 122 PLKEDFTIDGERIAEKA-K-NASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLIL 198 (337)
T ss_pred ecCCCCCcCHHHHHHhc-c-CCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcccchHHHHhhCCCEEE
Confidence 43 4678888765 3 3789999999999999999999999995 7999999999875322111 11 123488
Q ss_pred EECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 352 v~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+.|+||.++.+| ++.||++++++++++++.....++ .+.....++...+ +.+..+++...++...+.+.|.++
T Consensus 199 l~S~SK~~~l~G-lRiG~iv~~~~~i~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 274 (337)
T PRK03967 199 LRTFSKAFGLAG-IRAGYAIANEEIIDALYRIKPPFS--LNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY 274 (337)
T ss_pred EecchHhhcchh-hhheeeecCHHHHHHHHhhcCCCC--CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 899999998676 678999999999999887765443 3444444433333 344445556666677778888764
No 141
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=1.2e-19 Score=186.02 Aligned_cols=217 Identities=18% Similarity=0.168 Sum_probs=159.3
Q ss_pred ccCCCchhHHHHHHHHHhhh----C--C-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc
Q 013019 204 YGRYGNPTTVVVEEKMSALE----G--A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~----g--a-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi 275 (451)
+.+|+++....|++.|++++ | . .+.+++++|+ +++..++.+++++||.|+++.|+|...... +...|+
T Consensus 59 ~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~----~~~~g~ 134 (368)
T PRK03317 59 LNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPII----ARGTHT 134 (368)
T ss_pred hccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHH----HHhcCC
Confidence 45566666778999999987 3 2 3456666666 899999999999999999999999875533 344566
Q ss_pred EEEEeC-----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc---cccc--
Q 013019 276 TATVID-----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KALS-- 345 (451)
Q Consensus 276 ~v~~vd-----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~---~pl~-- 345 (451)
++..++ ..|+++++++++++++++|++++|+||||.+.+.+++.++++..++++|+||+|...... ....
T Consensus 135 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~ 214 (368)
T PRK03317 135 EWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLL 214 (368)
T ss_pred eeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHH
Confidence 655443 247899999987545899999999999999999999999999999999999998643211 1111
Q ss_pred --CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHHHHHHH
Q 013019 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRM 420 (451)
Q Consensus 346 --~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~L 420 (451)
....+++.|+||.++.+| ++.|++++++++++.++..+..+ ..++..+..+...+ +.+..++++..++...+
T Consensus 215 ~~~~~~i~~~SfSK~~g~~G-lRiG~~~~~~~~~~~l~~~~~~~--~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 291 (368)
T PRK03317 215 PEYPRLVVSRTMSKAFAFAG-GRLGYLAAAPAVVDALRLVRLPY--HLSAVTQAAARAALRHADELLASVAALRAERDRV 291 (368)
T ss_pred HhCCCEEEEEechhhhccch-hhhhhhhCCHHHHHHHHhcCCCC--CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 122478889999998666 67899999999999888665333 34555554444444 33444455666777778
Q ss_pred HHHHHcC
Q 013019 421 AEILEAH 427 (451)
Q Consensus 421 ae~L~~~ 427 (451)
.+.|+++
T Consensus 292 ~~~L~~~ 298 (368)
T PRK03317 292 VAWLREL 298 (368)
T ss_pred HHHHHHC
Confidence 8888876
No 142
>PRK09105 putative aminotransferase; Provisional
Probab=99.84 E-value=1.9e-19 Score=185.22 Aligned_cols=213 Identities=17% Similarity=0.203 Sum_probs=153.0
Q ss_pred cCCCchhHHHHHHHHHhhhCC-CcEEEeCCH-HHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG-~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
++|+.+...+|++.|++.+|. ++.|++++| ++++..++.+++++||+|++++|.|..... .++..|+++..++.
T Consensus 73 ~~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~----~~~~~g~~~~~v~~ 148 (370)
T PRK09105 73 GRYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWR----AADAQGAPVAKVPL 148 (370)
T ss_pred cCCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHH----HHHHcCCeEEEecC
Confidence 456666688899999999985 344555555 599999999999999999999999987653 34566777766642
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHh--cCCEEEEecCCCCCCcc-ccc---cCC-CcE
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ-KAL---SLG-ADL 350 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~--~g~~lVVD~tfa~~~~~-~pl---~~G-aDi 350 (451)
.|++++++. .+ ++++|++++|+||||.+.+.++|.++++. +|+++|+|++|...... ... +.+ .-+
T Consensus 149 ~~~~~~d~~~l~~~-~~-~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi 226 (370)
T PRK09105 149 RADGAHDVKAMLAA-DP-NAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLI 226 (370)
T ss_pred CCCCCCCHHHHHhc-CC-CCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEE
Confidence 467888776 34 48999999999999999998888888754 48999999998532111 111 112 237
Q ss_pred EEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 351 Vv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrg---L~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
++.|+||.++.+| ++.||++++++++++++.. . ....+......+... .+.+....++..++.+.+.+.|+++
T Consensus 227 ~~~SfSK~~g~~G-lRiG~~v~~~~~i~~l~~~-~--~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 302 (370)
T PRK09105 227 VLRTFSKLYGMAG-MRLGLAAARPDLLAKLARF-G--HNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK 302 (370)
T ss_pred EEecccHhhcCCc-cceeeeecCHHHHHHHHhc-C--CCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 7889999998877 6789999999999888765 1 122333333333332 2334444566667788888888875
No 143
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.84 E-value=8.5e-20 Score=186.51 Aligned_cols=216 Identities=13% Similarity=0.216 Sum_probs=157.9
Q ss_pred ccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
+.+|+.+....|++.++++++. .+.+++++|+ +++..++.+++++||+|++++|.|..... .....|+++..++
T Consensus 61 ~~~y~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~~~ 136 (367)
T PRK02731 61 LHRYPDGSGFELKAALAEKFGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPI----AAQAVGAKPVEVP 136 (367)
T ss_pred hcCCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHH----HHHHcCCeEEEec
Confidence 4566666677899999999986 3566777776 77888888899999999999999965432 2345688877765
Q ss_pred C----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc--CCEEEEecCCCCCCcc----cc---ccC-C
Q 013019 282 P----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ----KA---LSL-G 347 (451)
Q Consensus 282 ~----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~--g~~lVVD~tfa~~~~~----~p---l~~-G 347 (451)
. .|++++++++++ ++++|++++|+||||.+.++++|.++++.. |+++|+|++|...... .+ ++. .
T Consensus 137 ~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 215 (367)
T PRK02731 137 AKDYGHDLDAMLAAVTP-RTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFP 215 (367)
T ss_pred ccCCCCCHHHHHHHhCC-CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcC
Confidence 3 478999999976 489999999999999999999999999874 8999999997643211 11 111 2
Q ss_pred CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHH
Q 013019 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 348 aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~---tl~~Rl~~~~~nA~~Lae~L 424 (451)
..+++.|+||.++.+| .+.|+++++++++++++.....++ .+....+.+...++ .+....+...++...+.+.|
T Consensus 216 ~~i~~~S~SK~~g~~G-~RiG~l~~~~~~~~~l~~~~~~~~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L 292 (367)
T PRK02731 216 NVVVTRTFSKAYGLAG-LRVGYGIAPPEIIDALNRVRQPFN--VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFL 292 (367)
T ss_pred CEEEEeeehHhhcCcc-cceeeeeCCHHHHHHHHHccCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478889999987665 578999999999998887654443 34455444444443 23333344455666777888
Q ss_pred HcC
Q 013019 425 EAH 427 (451)
Q Consensus 425 ~~~ 427 (451)
+++
T Consensus 293 ~~~ 295 (367)
T PRK02731 293 AEL 295 (367)
T ss_pred HHC
Confidence 776
No 144
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=2.1e-19 Score=182.45 Aligned_cols=213 Identities=16% Similarity=0.159 Sum_probs=154.6
Q ss_pred cCCCchhHHHHHHHHHhhhCC-CcEEEeCCH-HHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG-~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
.+|+++....|++++|++++. .+.+++++| ++++..++.+++++||+|++++|.|..... .++..|+++..++.
T Consensus 55 ~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~----~~~~~g~~~~~v~~ 130 (353)
T PRK05387 55 RLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPV----YAGLYGIPYEEIPL 130 (353)
T ss_pred hcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHH----HHHHcCCEEEEeec
Confidence 456666678999999999985 334555554 599999999999999999999999965442 34556777766643
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc-CCEEEEecCCCCCCccccc----cCCCcEEE
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKAL----SLGADLVL 352 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~-g~~lVVD~tfa~~~~~~pl----~~GaDiVv 352 (451)
.|++++++ ++++|++++|+||||.+.+.+++.++++.+ |+++|+|++|......... .....+++
T Consensus 131 ~~~~~~d~~~l~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~ 205 (353)
T PRK05387 131 DDDFSIDVEDYLR-----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVV 205 (353)
T ss_pred CCCCCCCHHHHHh-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEE
Confidence 35666652 257899999999999999999999999875 9999999998543211111 12346999
Q ss_pred ECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhC-CCccHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG-GALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 353 ~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G-~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
.|+||.++.+| ++.|+++++++++++++..+...+ ..++....+.+...+ +.+....++..++...+.+.|+++
T Consensus 206 ~S~SK~~~~~G-lR~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 283 (353)
T PRK05387 206 QTFSKSRSLAG-LRVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL 283 (353)
T ss_pred EehhHhhcchh-hhceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999998666 578999999999999887764432 234555544444443 234444566667788888899877
No 145
>PRK07777 aminotransferase; Validated
Probab=99.84 E-value=8.9e-19 Score=180.63 Aligned_cols=210 Identities=15% Similarity=0.179 Sum_probs=148.3
Q ss_pred HHHHHHHHHhh----hCC----C-cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 212 TVVVEEKMSAL----EGA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 212 ~~~Lee~LA~l----~ga----e-~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
..+|++.++++ +|. + +.+++++|++|+.+++.+++++||+|+++.|.|...... +...|.++..++.
T Consensus 63 ~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~----~~~~g~~~~~~~~ 138 (387)
T PRK07777 63 IPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAV----IAMAGAHRVPVPL 138 (387)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHH----HHHCCCEEEEeec
Confidence 55677777764 453 2 355556667999999999999999999999999875533 3344655544421
Q ss_pred --------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----ccc---
Q 013019 283 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL--- 344 (451)
Q Consensus 283 --------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~pl--- 344 (451)
.|+++|+++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .++
T Consensus 139 ~~~~~~~~~d~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~ 217 (387)
T PRK07777 139 VPDGRGFALDLDALRAAVTPR-TRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATL 217 (387)
T ss_pred CCccCCCcCCHHHHHHhcCcc-cEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhC
Confidence 4789999988764 899999999999999874 888999999999999999998642210 111
Q ss_pred --cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHH----hhHHHHHHHHHHHHHHH
Q 013019 345 --SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR----GMKTLHLRVQQQNSTAL 418 (451)
Q Consensus 345 --~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lr----gL~tl~~Rl~~~~~nA~ 418 (451)
..+.++++.|+||.++.+| ++.|+++++++++++++..........+......+.. ..+.+....+...++..
T Consensus 218 ~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 296 (387)
T PRK07777 218 PGMRERTVTISSAAKTFNVTG-WKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRD 296 (387)
T ss_pred CCCcCcEEEEeechhhccCcC-ceeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 1246799999999998776 6789999999999888876654332222222222222 22333333456667788
Q ss_pred HHHHHHHcC
Q 013019 419 RMAEILEAH 427 (451)
Q Consensus 419 ~Lae~L~~~ 427 (451)
.+.+.|+++
T Consensus 297 ~l~~~L~~~ 305 (387)
T PRK07777 297 RLAAGLAEA 305 (387)
T ss_pred HHHHHHHhC
Confidence 888888775
No 146
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.84 E-value=3.3e-19 Score=183.87 Aligned_cols=168 Identities=20% Similarity=0.252 Sum_probs=133.8
Q ss_pred hhHHHHHHHHHhhhCCC-cEEEe-CCHHHHHHHHHHHH---ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC--
Q 013019 210 PTTVVVEEKMSALEGAE-STVIM-ASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae-~~vv~-sSG~aAi~~al~al---l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-- 282 (451)
+..+++++.+++++|.+ ..+++ +++++++..++.++ +++||+|++.++.|.+.+..+...++..|+++.+++.
T Consensus 60 ~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~ 139 (397)
T TIGR01976 60 QVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDE 139 (397)
T ss_pred HHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccc
Confidence 34678999999999963 33555 45557777666554 6899999999999988776665556778988887653
Q ss_pred ----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEECCcc
Q 013019 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATK 357 (451)
Q Consensus 283 ----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S~SK 357 (451)
.|+++++++++++ +++|++++|+||+|.+.|+++|.++|+++|+++++|+++..+. ..+..++|+|+++.|++|
T Consensus 140 ~~~~~~~~~l~~~i~~~-~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K 218 (397)
T TIGR01976 140 ATGELHPDDLASLLSPR-TRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYK 218 (397)
T ss_pred cCCCcCHHHHHHhcCCC-ceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechh
Confidence 2689999999874 9999999999999999999999999999999999999975432 223335789999999999
Q ss_pred cCCccccceeEEEEeCHHHHHHHHH
Q 013019 358 FIGGHNDVLAGSISGSGKLVTQIRN 382 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~~eli~~lr~ 382 (451)
+++ ++ +|++++++++++++..
T Consensus 219 ~~g-~~---~G~l~~~~~~~~~l~~ 239 (397)
T TIGR01976 219 FFG-PH---MGILWGRPELLMNLPP 239 (397)
T ss_pred hcC-Cc---eEEEEEcHHHHhhCCC
Confidence 985 33 7899999888877654
No 147
>PRK09148 aminotransferase; Validated
Probab=99.84 E-value=3.9e-19 Score=184.94 Aligned_cols=217 Identities=15% Similarity=0.147 Sum_probs=150.1
Q ss_pred cCCCch-hHHHHHHHHHhhh----CC----CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCC
Q 013019 205 GRYGNP-TTVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (451)
Q Consensus 205 ~R~~np-t~~~Lee~LA~l~----ga----e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~G 274 (451)
.+|+.+ ....|++++++++ |. ++.|++++|+ +++..++.+++.+||+|++++|.|...... +...|
T Consensus 62 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~g 137 (405)
T PRK09148 62 HRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFG----FIMAG 137 (405)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHH----HHhcC
Confidence 444443 2456777777765 42 3245556555 999999999999999999999999986533 34568
Q ss_pred cEEEEeCCC----CHHHHHHhhc---CCCeEEEEEeCCCCCccccccH---HHHHHHHHhcCCEEEEecCCCCCCcc---
Q 013019 275 ITATVIDPA----DMEGLEAALN---NNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (451)
Q Consensus 275 i~v~~vd~~----D~d~Le~ai~---~~~tklV~lesPsNPtG~v~DL---~~IaelA~~~g~~lVVD~tfa~~~~~--- 341 (451)
+++..++.. ++++++++++ + ++++|++++|+||||.+.+. ++|.++|+++|++||+|++|......
T Consensus 138 ~~v~~v~~~~~~~~~~~l~~~~~~~~~-~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 216 (405)
T PRK09148 138 GVIRSVPAEPDEEFFPALERAVRHSIP-KPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNP 216 (405)
T ss_pred CEEEEEeCCCCCCCccCHHHHHhhccc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCC
Confidence 877666432 2344444443 3 48999999999999999985 67888999999999999998643211
Q ss_pred -c-cccC----CCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH----HHHHHHH
Q 013019 342 -K-ALSL----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQ 411 (451)
Q Consensus 342 -~-pl~~----GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~----tl~~Rl~ 411 (451)
. ...+ +..+++.|+||.++.+| ++.||++++++++++++..+.....+.+......+...|+ .+....+
T Consensus 217 ~~s~~~~~~~~~~~i~~~SfSK~~~~pG-lR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~ 295 (405)
T PRK09148 217 PPSVLQVPGAKDVTVEFTSMSKTFSMAG-WRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRE 295 (405)
T ss_pred CCChhhCCCccCcEEEEeccccccCCcc-hheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHH
Confidence 1 1111 23467899999998777 6899999999999999887765544444444333333332 2333345
Q ss_pred HHHHHHHHHHHHHHcC
Q 013019 412 QQNSTALRMAEILEAH 427 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~~ 427 (451)
+..++...+.+.|+++
T Consensus 296 ~~~~~r~~l~~~L~~~ 311 (405)
T PRK09148 296 LYKKRRDVLVESFGRA 311 (405)
T ss_pred HHHHHHHHHHHHHHHc
Confidence 5667777788888775
No 148
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.84 E-value=1.3e-18 Score=179.25 Aligned_cols=210 Identities=13% Similarity=0.088 Sum_probs=165.9
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-----
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----- 282 (451)
.+.++++|+.+++++|.+++++++||++|+.+++.++ +++||+|+++.++|.++... +...|+++.++|.
T Consensus 30 ~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~----~~~~G~~~v~~d~d~~~~ 105 (375)
T PRK11706 30 GGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANA----FVLRGAKIVFVDIRPDTM 105 (375)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHH----HHHcCCEEEEEecCCCcC
Confidence 4678999999999999999999999999998887766 78999999999999987643 3456888888763
Q ss_pred -CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC--ccccccCCCcEEEECCc--c
Q 013019 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVLHSAT--K 357 (451)
Q Consensus 283 -~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~--~~~pl~~GaDiVv~S~S--K 357 (451)
.|+++++++++++ +++|++ +|++|...|+++|.++|+++|++||+|++++.+. ..++.....|+.+.|++ |
T Consensus 106 ~~d~~~le~~i~~~-tk~i~~---~~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~K 181 (375)
T PRK11706 106 NIDETLIEAAITPK-TRAIVP---VHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETK 181 (375)
T ss_pred CcCHHHHHHhcCCC-CeEEEE---eCCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCCc
Confidence 4789999999874 999986 4678999999999999999999999999986543 33444333588898877 9
Q ss_pred cCCccccceeEEEEeCHHHHHHHHHHhHh-------------------hCC--CccHHHHHHHHHhhHHHHHHHHHHHHH
Q 013019 358 FIGGHNDVLAGSISGSGKLVTQIRNLHHV-------------------LGG--ALNPNAAYLIIRGMKTLHLRVQQQNST 416 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~~eli~~lr~~~~~-------------------~G~--~ls~~~a~l~lrgL~tl~~Rl~~~~~n 416 (451)
.++... .|++++.++++.++++.++.. +|. .++...+.+++..++.++...++..++
T Consensus 182 ~l~~g~--gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~ 259 (375)
T PRK11706 182 NYTAGE--GGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQRRLAL 259 (375)
T ss_pred cccccC--CeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 997532 244555567888877766531 122 245666777778888898888888999
Q ss_pred HHHHHHHHHcCC
Q 013019 417 ALRMAEILEAHP 428 (451)
Q Consensus 417 A~~Lae~L~~~p 428 (451)
++.+.+.|.+.+
T Consensus 260 ~~~~~~~L~~~~ 271 (375)
T PRK11706 260 WQRYYDALAPLA 271 (375)
T ss_pred HHHHHHHhcCCC
Confidence 999999998876
No 149
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1.1e-18 Score=181.30 Aligned_cols=213 Identities=15% Similarity=0.186 Sum_probs=151.9
Q ss_pred HHHHHHHHHhhhCC---CcEEEeCCH-HHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-----
Q 013019 212 TVVVEEKMSALEGA---ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (451)
Q Consensus 212 ~~~Lee~LA~l~ga---e~~vv~sSG-~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----- 282 (451)
++.+.+.+++..|. .+.+++++| ++|+..++.+++++||+|++++|+|......+ ...+..+..++.
T Consensus 76 r~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~----~~~~~~~~~v~~~~~~~ 151 (402)
T PRK06107 76 RKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMV----LANDGTPVIVACPEEQG 151 (402)
T ss_pred HHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHH----HHcCCEEEEecCCcccC
Confidence 45555666655554 234556655 59999999999999999999999988765433 222333333321
Q ss_pred --CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhc-CCEEEEecCCCCCCcc----cc-cc-----C
Q 013019 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKK-GAIVCIDGTFATPLNQ----KA-LS-----L 346 (451)
Q Consensus 283 --~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~-g~~lVVD~tfa~~~~~----~p-l~-----~ 346 (451)
.|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++ |+++|+|++|...... .. .. .
T Consensus 152 ~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~ 230 (402)
T PRK06107 152 FKLTPEALEAAITP-RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELR 230 (402)
T ss_pred CCCCHHHHHhhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCcc
Confidence 367899998876 4899999999999999985 67788889998 9999999998642111 01 11 1
Q ss_pred CCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHH
Q 013019 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAE 422 (451)
Q Consensus 347 GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL----~tl~~Rl~~~~~nA~~Lae 422 (451)
+..+++.|+||.++.+| .+.||++++++++++++......+...+...++++...| +.+....+...++.+.+.+
T Consensus 231 ~~vi~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 309 (402)
T PRK06107 231 DRVLVTNGVSKTYAMTG-WRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALA 309 (402)
T ss_pred CCEEEEeccchhhcCcc-cceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 23588899999997676 678999999999999988877666566666655555444 2344445566777888889
Q ss_pred HHHcCCCe
Q 013019 423 ILEAHPKV 430 (451)
Q Consensus 423 ~L~~~p~V 430 (451)
.|++++++
T Consensus 310 ~L~~~~g~ 317 (402)
T PRK06107 310 LLNAIPGL 317 (402)
T ss_pred HHhcCCCC
Confidence 99887553
No 150
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.84 E-value=3.3e-19 Score=184.83 Aligned_cols=211 Identities=23% Similarity=0.249 Sum_probs=157.7
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d 286 (451)
++...+||++|++++|.+.+++++||++|+..++..+.. +|+.|+.....|+.+.. .+...|+++..++..|++
T Consensus 89 ~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~----~~~~~g~~~~~~~~~d~~ 164 (402)
T TIGR01821 89 NIPHVELEAELADLHGKESALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIE----GIRHSGAEKFIFRHNDVA 164 (402)
T ss_pred cHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHH----HHHHcCCeEEEECCCCHH
Confidence 577899999999999999999999999999999887765 67777766555554432 234457776666667888
Q ss_pred HHHHhhc---CCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc---------cccCCCcEEEEC
Q 013019 287 GLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLHS 354 (451)
Q Consensus 287 ~Le~ai~---~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~---------pl~~GaDiVv~S 354 (451)
++++.++ ++++++|++|+|+||+|.+.|+++|.++|+++|+++|+|++++.+.... .+....|+++.+
T Consensus 165 ~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t 244 (402)
T TIGR01821 165 HLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGT 244 (402)
T ss_pred HHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEe
Confidence 8888775 2248999999999999999999999999999999999999976432211 011235899999
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHHhHh--hCCCccHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--~G~~ls~~~a~l~lrgL~tl---~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
++|.+++. ||++++++++++.++..... +....++..+..++..|+.+ ..+.+++.+++..+.+.|+++
T Consensus 245 ~sKa~g~~----GG~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (402)
T TIGR01821 245 LAKAFGVV----GGYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL 318 (402)
T ss_pred chhhhccC----CceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 99999875 58999999998888764432 23345666665555555543 333455567888888888875
No 151
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=2.1e-19 Score=184.58 Aligned_cols=216 Identities=18% Similarity=0.226 Sum_probs=155.7
Q ss_pred ccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
..+|+++....|++.|++++|. .+.+++++|+ +++..++.+++++||+|++..|.|+... ..++..|+++..++
T Consensus 65 ~~~Y~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~----~~~~~~g~~~~~v~ 140 (371)
T PRK05166 65 LRLYPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHE----DYPTMMGARVERVT 140 (371)
T ss_pred hhcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCeEEEee
Confidence 3456666666899999999986 3456666666 8999898999999999999999998654 33456788877765
Q ss_pred C-----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHh--cCCEEEEecCCCCCCcc----cc---cc-C
Q 013019 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KA---LS-L 346 (451)
Q Consensus 282 ~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~--~g~~lVVD~tfa~~~~~----~p---l~-~ 346 (451)
. .|+++++++++++ +++|++++|+||||.+++.+++.++++. .++++|+|++|...... .. +. .
T Consensus 141 ~~~~~~~~~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 219 (371)
T PRK05166 141 VTPDLGFDLDALCAAVARA-PRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKAR 219 (371)
T ss_pred cCCCCCCCHHHHHHhhhcC-CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhc
Confidence 3 3689999988774 8999999999999999998777777664 47899999998643211 11 11 1
Q ss_pred -CCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHHHHHHHH
Q 013019 347 -GADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMA 421 (451)
Q Consensus 347 -GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~La 421 (451)
...+++.|+||.++.+| ++.||++. ++++++.++..+..++ .+......+...+ +.+...++...++.+.+.
T Consensus 220 ~~~vi~i~SfSK~~~l~G-lRiG~~i~~~~~l~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~ 296 (371)
T PRK05166 220 GLPWIVLRTFSKAYGLAG-LRVGYGLVSDPELVGLLDRVRTPFN--VNGAAQAAALAALDDEEHLAKGVALALAERERLK 296 (371)
T ss_pred CCCEEEEeechHhhhcch-hheeeeecCCHHHHHHHHHhccCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 13488999999998776 57888664 7788888876654333 3444433333222 344444556667777888
Q ss_pred HHHHcC
Q 013019 422 EILEAH 427 (451)
Q Consensus 422 e~L~~~ 427 (451)
+.|+++
T Consensus 297 ~~L~~~ 302 (371)
T PRK05166 297 KELAEM 302 (371)
T ss_pred HHHHHC
Confidence 999887
No 152
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.84 E-value=2.6e-19 Score=183.10 Aligned_cols=204 Identities=18% Similarity=0.215 Sum_probs=144.7
Q ss_pred HHHHHHHHhhh----C---C-CcEEEeCCHH-HHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 213 VVVEEKMSALE----G---A-ESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 213 ~~Lee~LA~l~----g---a-e~~vv~sSG~-aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
.+|++.+++++ | . ++.+++++|+ +++..++..+ +++||+|++++|.|..... .+...|+++..++
T Consensus 65 ~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~- 139 (364)
T PRK07865 65 PELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV----GARLAGATVVRAD- 139 (364)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH----HHHhcCCEEEecC-
Confidence 45666666654 4 2 3456667666 8888877777 7999999999999987553 3345688877664
Q ss_pred CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc-c---c-------cCCC
Q 013019 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-A---L-------SLGA 348 (451)
Q Consensus 283 ~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~-p---l-------~~Ga 348 (451)
++++++. + ++++|++++|+||||.+++ +++|.++|+++|++||+|++|....... + + ....
T Consensus 140 -~~~~l~~---~-~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 214 (364)
T PRK07865 140 -SLTELGP---Q-RPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTG 214 (364)
T ss_pred -ChhhCCc---c-cceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccce
Confidence 3444332 3 5899999999999999986 5788888999999999999987432111 1 1 1123
Q ss_pred cEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHH
Q 013019 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILE 425 (451)
Q Consensus 349 DiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~---tl~~Rl~~~~~nA~~Lae~L~ 425 (451)
.+++.|+||.++.+| .++||++++++++++++..+...+...+......+...++ .+....+...++...+.+.|+
T Consensus 215 ~i~~~S~SK~~~~~G-lRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 293 (364)
T PRK07865 215 LLAVHSLSKQSNLAG-YRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALE 293 (364)
T ss_pred EEEEeechhccCCCc-eeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 489999999998666 6789999999999999887766665566665554444443 233334555667777888887
Q ss_pred cC
Q 013019 426 AH 427 (451)
Q Consensus 426 ~~ 427 (451)
++
T Consensus 294 ~~ 295 (364)
T PRK07865 294 AA 295 (364)
T ss_pred Hc
Confidence 75
No 153
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.84 E-value=7.3e-19 Score=179.68 Aligned_cols=213 Identities=21% Similarity=0.198 Sum_probs=161.4
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHH
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d 286 (451)
+..+..++++++++++++.++.+++++|++++..++..++++||+|+++++.|+.+... +...|.++..++..|++
T Consensus 81 g~~~~~~~l~~~la~~~~~~~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~ 156 (385)
T PRK05958 81 GNSPAHEALEEELAEWFGAERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDG----ARLSRARVRRYPHNDVD 156 (385)
T ss_pred CCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHH----HHhcCCceEEeCCCCHH
Confidence 34677889999999999988899999999888888888899999999999999876543 34457787778778899
Q ss_pred HHHHhhcCC--CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc---c------ccc-CCCcEEEEC
Q 013019 287 GLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---K------ALS-LGADLVLHS 354 (451)
Q Consensus 287 ~Le~ai~~~--~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~---~------pl~-~GaDiVv~S 354 (451)
++++.+++. ++++++++++.|++|...++++|.++|+++|+++|+|++++.+... . .+. ...++++.|
T Consensus 157 ~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s 236 (385)
T PRK05958 157 ALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGT 236 (385)
T ss_pred HHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEe
Confidence 999988652 3678888899999999999999999999999999999998654221 0 111 123488999
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHHhHh--hCCCccHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--~G~~ls~~~a~l~lrgL~tl---~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
++|++++. ||+++++++++++++..... .+...++..+..+...++.+ ....++..++.+.+.+.|++.
T Consensus 237 ~sK~~~~~----Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T PRK05958 237 LGKALGSS----GAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRAL 310 (385)
T ss_pred chhhcccC----CcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 99999764 48888998888877644321 22334555544444444433 344566677788888888865
No 154
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.83 E-value=3.8e-19 Score=181.71 Aligned_cols=211 Identities=18% Similarity=0.209 Sum_probs=144.5
Q ss_pred CCCchh-HHHHHHHHHhhh----C---C-CcEEEeCCHH-HHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCC
Q 013019 206 RYGNPT-TVVVEEKMSALE----G---A-ESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (451)
Q Consensus 206 R~~npt-~~~Lee~LA~l~----g---a-e~~vv~sSG~-aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~G 274 (451)
+|+++. ...|++.+++++ | . .+.+++++|+ +++..++..+ +++||+|++++|+|...... +...|
T Consensus 51 ~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~----~~~~g 126 (357)
T TIGR03539 51 GYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVG----ALLAG 126 (357)
T ss_pred CCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHH----HHhcC
Confidence 444443 345666666654 3 2 2456666655 8888888877 79999999999999865432 34567
Q ss_pred cEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc-ccc---cc--
Q 013019 275 ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-QKA---LS-- 345 (451)
Q Consensus 275 i~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~-~~p---l~-- 345 (451)
.++..++ +++.+ ++.++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... ..+ +.
T Consensus 127 ~~~~~v~--~~~~l----~~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 200 (357)
T TIGR03539 127 ATPVAAD--DPTEL----DPVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPR 200 (357)
T ss_pred CEEeccC--Chhhc----CccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecc
Confidence 7776654 44433 2235899999999999999986 66788999999999999999864211 111 11
Q ss_pred -----CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH---HHHHHHHHHHHH
Q 013019 346 -----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTA 417 (451)
Q Consensus 346 -----~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t---l~~Rl~~~~~nA 417 (451)
..-.+++.|+||.++.+| .++||++++++++++++..+...+...+......+...|+. +....+...++.
T Consensus 201 ~~~~~~~~vi~~~S~SK~~~~~G-~R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 279 (357)
T TIGR03539 201 VCGGDHTGLLAVHSLSKRSNLAG-YRAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARR 279 (357)
T ss_pred cCCCccccEEEEeccccccCCCc-eeEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 112488999999987666 67899999999999988777665555555555544444422 222334445666
Q ss_pred HHHHHHHHcC
Q 013019 418 LRMAEILEAH 427 (451)
Q Consensus 418 ~~Lae~L~~~ 427 (451)
..+.+.|.++
T Consensus 280 ~~~~~~L~~~ 289 (357)
T TIGR03539 280 AQLKPALEKA 289 (357)
T ss_pred HHHHHHHHHc
Confidence 7777888775
No 155
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.83 E-value=2.4e-19 Score=178.78 Aligned_cols=213 Identities=16% Similarity=0.173 Sum_probs=149.0
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCH-HHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC---
Q 013019 206 RYGNPTTVVVEEKMSALEGAESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--- 281 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~gae~~vv~sSG-~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd--- 281 (451)
.++.....++|+.+|+++|+++++++++| ++++..++.+++++||+|++++++|.+....+ ...|+++.+++
T Consensus 55 ~~~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~----~~~g~~~~~v~~~~ 130 (294)
T cd00615 55 LDPTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGL----VLSGAVPVYLKPER 130 (294)
T ss_pred CCCChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHH----HHCCCEEEEecCcc
Confidence 34556678999999999999888875555 58999999999999999999999998866443 34577766653
Q ss_pred --------CCCHHHHHHhhcC-CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC------ccccccC
Q 013019 282 --------PADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL------NQKALSL 346 (451)
Q Consensus 282 --------~~D~d~Le~ai~~-~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~------~~~pl~~ 346 (451)
..|++++++++++ .++++|++++| |++|.+.|+++|.++|+++|+++++|++++..+ .......
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence 2478999999964 25899999998 699999999999999999999999999986521 2233456
Q ss_pred CCcEEEECCcccCCccccceeEEEEeCHHH--HHHHHHHhHhhCCC-ccHHHHHHHHHhhHH----HHHHHHHHHHHHHH
Q 013019 347 GADLVLHSATKFIGGHNDVLAGSISGSGKL--VTQIRNLHHVLGGA-LNPNAAYLIIRGMKT----LHLRVQQQNSTALR 419 (451)
Q Consensus 347 GaDiVv~S~SK~l~G~gdv~gG~Iv~~~el--i~~lr~~~~~~G~~-ls~~~a~l~lrgL~t----l~~Rl~~~~~nA~~ 419 (451)
|+|+++.|++|+++|.. .+|++..+.+. .++++.....+... ++......+..+++. -..++++..++++.
T Consensus 210 ~~div~~S~hK~l~g~~--~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~ 287 (294)
T cd00615 210 GADIVVQSTHKTLPALT--QGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALY 287 (294)
T ss_pred CCcEEEEchhcccchHh--HHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 89999999999998764 35666554432 23444433333222 221111111112221 23345666666666
Q ss_pred HHHHHH
Q 013019 420 MAEILE 425 (451)
Q Consensus 420 Lae~L~ 425 (451)
+.++|.
T Consensus 288 ~r~~l~ 293 (294)
T cd00615 288 ARQEIN 293 (294)
T ss_pred HHHHHh
Confidence 666654
No 156
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.83 E-value=7.4e-19 Score=179.61 Aligned_cols=204 Identities=22% Similarity=0.275 Sum_probs=151.7
Q ss_pred chhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcC---CCCcchHHHHHHhhhcCCcEEEEeCCC
Q 013019 209 NPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTT---DCYRKTRIFIETVLPKMGITATVIDPA 283 (451)
Q Consensus 209 npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~~GD~VIv~~---~~Y~~t~~~l~~~l~~~Gi~v~~vd~~ 283 (451)
.+..++||+++|+++|. ++++++++|.+|+..++.+++++||+|+++. +.|.... ..++..|.++ +...
T Consensus 53 ~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~----~~~~l~ga~~--~~~~ 126 (346)
T TIGR03576 53 AIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIP----RSCKLAGAEY--FESD 126 (346)
T ss_pred HHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHH----HHHHHcCCEE--eccC
Confidence 36688999999999998 8899999999999999999999999999753 4555433 3345556664 3334
Q ss_pred CHHHHHHhhcCCCeEEEEEeCCCCCcccc---ccHHHHHHHHHhcCCEEEEecCCCCCCc----cc-cccCCCcEEEECC
Q 013019 284 DMEGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLN----QK-ALSLGADLVLHSA 355 (451)
Q Consensus 284 D~d~Le~ai~~~~tklV~lesPsNPtG~v---~DL~~IaelA~~~g~~lVVD~tfa~~~~----~~-pl~~GaDiVv~S~ 355 (451)
++++++. . + ++++|++ +++|++|.+ .||++|+++|+++|++|++||+|+.++. .. ....|.|+++.|+
T Consensus 127 ~l~~l~~-~-~-~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~ 202 (346)
T TIGR03576 127 ELSELKK-I-D-GTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTST 202 (346)
T ss_pred CHHHHhh-C-c-CceEEEE-ECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEecc
Confidence 5666543 2 3 3788888 467899998 5899999999999999999999987531 11 2345789999999
Q ss_pred cccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHH
Q 013019 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAEILE 425 (451)
Q Consensus 356 SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~--~Rl~~~~~nA~~Lae~L~ 425 (451)
||.++|. ++|++++++++++.++.....++.++++..++.++.+|+.+. .+.+...++...+.+.|.
T Consensus 203 SKalaG~---r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~ 271 (346)
T TIGR03576 203 DKLMDGP---RGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFD 271 (346)
T ss_pred chhcccc---ceEEEEeCHHHHHHHHHhhcCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 9988776 489999999999999988776665566667777777776532 223344445555555555
No 157
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.83 E-value=3.5e-19 Score=181.92 Aligned_cols=216 Identities=17% Similarity=0.190 Sum_probs=150.1
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC
Q 013019 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~ 283 (451)
+|+.+....|++.++++++. ++.+++++|+ +++..++.++ .+|+ +++..|.|.... ..++..|+++..++..
T Consensus 51 ~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~~~~----~~~~~~g~~~~~v~~~ 124 (356)
T PRK08056 51 RYPDVEYRHLHQALARHHQVPASWILAGNGETESIFAVVSGL-KPRR-AMIVTPGFAEYR----RALQQVGCEIRRYSLR 124 (356)
T ss_pred cCcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh-CCCC-EEEeCCCcHHHH----HHHHHcCCeEEEEecc
Confidence 45656678999999999986 3455566665 8888888775 6776 677788887644 3445668877766431
Q ss_pred -----CH-HHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc-----cc-cCCC
Q 013019 284 -----DM-EGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-----AL-SLGA 348 (451)
Q Consensus 284 -----D~-d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~-----pl-~~Ga 348 (451)
++ +++++++.+ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....... .+ ....
T Consensus 125 ~~~~~~~~~~~~~~~~~-~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 203 (356)
T PRK08056 125 EADGWQLTDAILEALTP-DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPH 203 (356)
T ss_pred cccCCCccHHHHHhccC-CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCC
Confidence 22 355566665 4899999999999999998 7889999999999999999986543211 11 1245
Q ss_pred cEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHH
Q 013019 349 DLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 349 DiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~Lae~L 424 (451)
++++.|+||+++.+| .+.||+++ +++++++++.....+ ..+.+.+..+...+ ..+....++..++.+.+.+.|
T Consensus 204 ~i~~~S~SK~~~~~G-~RiG~~v~~~~~~~~~l~~~~~~~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L 280 (356)
T PRK08056 204 LWVLRSLTKFYAIPG-LRLGYLVNSDDAAVARMRRQQMPW--SINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQAL 280 (356)
T ss_pred EEEEEechhhccCcc-hhheeeecCCHHHHHHHHHhCCCC--chhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999777 57888887 567777777544322 33444444433333 223333455667788888999
Q ss_pred HcCCCeE
Q 013019 425 EAHPKVL 431 (451)
Q Consensus 425 ~~~p~V~ 431 (451)
++.+++.
T Consensus 281 ~~~~~~~ 287 (356)
T PRK08056 281 CALPLLT 287 (356)
T ss_pred hcCCCcE
Confidence 8887653
No 158
>PRK08363 alanine aminotransferase; Validated
Probab=99.83 E-value=2.3e-18 Score=178.35 Aligned_cols=217 Identities=15% Similarity=0.142 Sum_probs=151.5
Q ss_pred chhHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 209 NPTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 209 npt~~~Lee~LA~l~g--------ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
.+....|+++++++++ .++.++++++++|+..++.+++++||+|++++|+|......+ ...|..+..+
T Consensus 69 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~v~~ 144 (398)
T PRK08363 69 SEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLV----KFYGGVPVEY 144 (398)
T ss_pred CCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCEEEEe
Confidence 4556778888888763 134455555569999999999999999999999999876433 3455544433
Q ss_pred -C------CCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc---c---c
Q 013019 281 -D------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A---L 344 (451)
Q Consensus 281 -d------~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~---p---l 344 (451)
+ ..|+++++++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....... + +
T Consensus 145 ~~~~~~~~~~d~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~ 223 (398)
T PRK08363 145 RTIEEEGWQPDIDDIRKKITEK-TKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSL 223 (398)
T ss_pred ccccccCCcCCHHHHHhhCCcc-eEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHc
Confidence 1 13688899988764 899999999999999987 8889999999999999999986432111 1 1
Q ss_pred c-CCCcEEEECCcccCCccccceeEEEEe--CHHHHHHHHHHhHhh---CCCccHHHHHHHHHhh----HHHHHHHHHHH
Q 013019 345 S-LGADLVLHSATKFIGGHNDVLAGSISG--SGKLVTQIRNLHHVL---GGALNPNAAYLIIRGM----KTLHLRVQQQN 414 (451)
Q Consensus 345 ~-~GaDiVv~S~SK~l~G~gdv~gG~Iv~--~~eli~~lr~~~~~~---G~~ls~~~a~l~lrgL----~tl~~Rl~~~~ 414 (451)
. ....+++.|+||.++.+| ++.||+++ ++++++.++.....+ ....+.....++...| +.+....++..
T Consensus 224 ~~~~~vi~~~SfSK~~~~~G-lRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~ 302 (398)
T PRK08363 224 TKDVPVIVMNGLSKVYFATG-WRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLK 302 (398)
T ss_pred CcCCcEEEEecchhccCCcc-ceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 1 112477899999988776 67888886 677777766543221 1223444433333322 34444456667
Q ss_pred HHHHHHHHHHHcCCCeE
Q 013019 415 STALRMAEILEAHPKVL 431 (451)
Q Consensus 415 ~nA~~Lae~L~~~p~V~ 431 (451)
++...+.+.|+++|++.
T Consensus 303 ~~~~~l~~~L~~~~~~~ 319 (398)
T PRK08363 303 ERRDYIYKRLNEIPGIS 319 (398)
T ss_pred HHHHHHHHHHhcCCCCE
Confidence 77888889998887653
No 159
>PLN02651 cysteine desulfurase
Probab=99.83 E-value=3.4e-19 Score=182.41 Aligned_cols=222 Identities=17% Similarity=0.167 Sum_probs=155.3
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHH----ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~al----l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
....++++++|++++|.+ ..+++++|++++..++.++ .++||+|++.+..|+++...+.. +...|++++.++.
T Consensus 42 ~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~-~~~~g~~v~~v~~ 120 (364)
T PLN02651 42 EDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRH-LQQEGFEVTYLPV 120 (364)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHH-HHhcCCEEEEEcc
Confidence 345678899999999973 3455556668877776554 47899999999999886655533 3467888887754
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEEECCc
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSAT 356 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv~S~S 356 (451)
.|+++++++++++ +++|++++++|+||.+.|+++|.++||++|+++++|++++.+ ...+..++|+|+++.|.+
T Consensus 121 ~~~~~~d~~~l~~~i~~~-t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~h 199 (364)
T PLN02651 121 KSDGLVDLDELAAAIRPD-TALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGH 199 (364)
T ss_pred CCCCcCCHHHHHHhcCCC-cEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechh
Confidence 3789999999875 999999999999999999999999999999999999998765 334555689999999999
Q ss_pred ccCCccccceeEEEEeCHHHHHHHHHHhH-------hhCCCccHHHHHHHHHhhHHHHH----HHHHHHHHHHHHHHHHH
Q 013019 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMKTLHL----RVQQQNSTALRMAEILE 425 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~~eli~~lr~~~~-------~~G~~ls~~~a~l~lrgL~tl~~----Rl~~~~~nA~~Lae~L~ 425 (451)
|+++++| .|+++.+++...++..... ...++.+....+.+..+++.+.. ..++..+..+++.+.|+
T Consensus 200 K~~gp~G---~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~ 276 (364)
T PLN02651 200 KIYGPKG---VGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLR 276 (364)
T ss_pred hhCCCCc---eEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 9865554 6787777765544332211 11223333333333344443322 23344455666667776
Q ss_pred c-CCCeEEEecC
Q 013019 426 A-HPKVLLLFIT 436 (451)
Q Consensus 426 ~-~p~V~~V~yP 436 (451)
+ .|+++ ++.|
T Consensus 277 ~~~~~~~-i~~~ 287 (364)
T PLN02651 277 AKLGGVR-VNGP 287 (364)
T ss_pred hhCCCEE-EECC
Confidence 5 56763 3444
No 160
>PRK09265 aminotransferase AlaT; Validated
Probab=99.83 E-value=1.3e-18 Score=180.77 Aligned_cols=218 Identities=14% Similarity=0.166 Sum_probs=144.3
Q ss_pred CCCchh-HHHHHHHHHhhh------CC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE
Q 013019 206 RYGNPT-TVVVEEKMSALE------GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (451)
Q Consensus 206 R~~npt-~~~Lee~LA~l~------ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~ 276 (451)
+|+.+. ...|++.+++++ +. .+.+++++|+ +++..++.+++++||+|++++|+|......+ ...|..
T Consensus 67 ~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~ 142 (404)
T PRK09265 67 GYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAV----SLSGGK 142 (404)
T ss_pred CCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHH----HHcCCE
Confidence 344444 467888888876 32 3456666666 7888999999999999999999999755433 334555
Q ss_pred EEEe--CC-----CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----c
Q 013019 277 ATVI--DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----K 342 (451)
Q Consensus 277 v~~v--d~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~ 342 (451)
+..+ +. .|+++++++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .
T Consensus 143 ~v~~~~~~~~~~~~d~~~l~~~~~~~-~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~ 221 (404)
T PRK09265 143 PVHYLCDEEAGWFPDLDDIRSKITPR-TKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHI 221 (404)
T ss_pred EEEEecccccCCCCCHHHHHHhcccc-ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcC
Confidence 4433 21 3688999988764 999999999999999998 888999999999999999998643211 1
Q ss_pred c-ccC--C-CcEEEECCcccCCccccceeEEEEe--CHHH----HHHHHHHhHhhCCCccHHHHHHHHHhhH---HHHH-
Q 013019 343 A-LSL--G-ADLVLHSATKFIGGHNDVLAGSISG--SGKL----VTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHL- 408 (451)
Q Consensus 343 p-l~~--G-aDiVv~S~SK~l~G~gdv~gG~Iv~--~~el----i~~lr~~~~~~G~~ls~~~a~l~lrgL~---tl~~- 408 (451)
+ ..+ . .-+++.|+||.++.+| ++.||++. ++++ ++.++... ......+.....++...|. .+..
T Consensus 222 ~~~~~~~~~~vi~~~S~SK~~~~pG-lRiG~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~ 299 (404)
T PRK09265 222 SIASLAPDLLCVTFNGLSKAYRVAG-FRVGWMVLSGPKKHAKGYIEGLDMLA-SMRLCANVPAQHAIQTALGGYQSINEL 299 (404)
T ss_pred CHHHcCCCceEEEEecchhhccCcc-cceEEEEEeCchHHHHHHHHHHHHHh-ccccCCCcHHHHHHHHHhcCchhHHHH
Confidence 1 111 1 2367899999998777 56788874 4443 33333221 1222334444443333332 1211
Q ss_pred --HHHHHHHHHHHHHHHHHcCCCe
Q 013019 409 --RVQQQNSTALRMAEILEAHPKV 430 (451)
Q Consensus 409 --Rl~~~~~nA~~Lae~L~~~p~V 430 (451)
..++..++...+.+.|++++++
T Consensus 300 ~~~~~~~~~~r~~~~~~L~~~~~~ 323 (404)
T PRK09265 300 ILPGGRLYEQRDRAWELLNAIPGV 323 (404)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCC
Confidence 1234556677788888877664
No 161
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.83 E-value=3e-19 Score=173.54 Aligned_cols=252 Identities=18% Similarity=0.260 Sum_probs=192.6
Q ss_pred cccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc-CCCeEEEcC
Q 013019 178 VNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTTT 256 (451)
Q Consensus 178 ~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~-~GD~VIv~~ 256 (451)
.+|+|+..|+.++...+.+...++..|+ .+|+...||+.+|++.|.|.+++++||+..+.++++.-+. +|.+||+.+
T Consensus 26 LRSDTvT~PTdeMr~am~eA~vgDdVyG--eD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd 103 (384)
T KOG1368|consen 26 LRSDTVTVPTDEMRRAMAEASVGDDVYG--EDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGD 103 (384)
T ss_pred cccccccCChHHHHHHHhhcccCccccc--CCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcCCCceEEecc
Confidence 6788898888777777777777788898 6799999999999999999999999999998888887665 899999998
Q ss_pred CCCcchHHHHHHhhhcCCcEEEEeC-----CCCHHHHHHhhcCC-------CeEEEEEeCCCCCcc-ccccH---HHHHH
Q 013019 257 DCYRKTRIFIETVLPKMGITATVID-----PADMEGLEAALNNN-------NVSLFFTESPTNPFL-RCVDV---KLVSD 320 (451)
Q Consensus 257 ~~Y~~t~~~l~~~l~~~Gi~v~~vd-----~~D~d~Le~ai~~~-------~tklV~lesPsNPtG-~v~DL---~~Iae 320 (451)
.+|--.++.- .+...-|+.++.+. ..++++||+++..+ .|++|.+|+.+|.+| ++.+| ++|.+
T Consensus 104 ~~HI~~~E~g-g~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~ 182 (384)
T KOG1368|consen 104 RAHIHRYEQG-GISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKA 182 (384)
T ss_pred chheeehhcc-ChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHH
Confidence 8775444321 11222355555543 24799999999732 489999999999887 88876 46788
Q ss_pred HHHhcCCEEEEecC--C----CCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCcc--
Q 013019 321 LCHKKGAIVCIDGT--F----ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN-- 392 (451)
Q Consensus 321 lA~~~g~~lVVD~t--f----a~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls-- 392 (451)
+|++||+.|++|.+ | +.++..+-+-.-+|-|-.-+||.++.+ .|.+++++++++++.+.++..+|+.+-
T Consensus 183 lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAP---VGSViVG~k~FI~kA~~~RKalGGGmRQs 259 (384)
T KOG1368|consen 183 LAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGGMRQS 259 (384)
T ss_pred HHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCC---cccEEEccHHHHHHHHHHHHHhcCchhHH
Confidence 89999999999998 2 233333323334687888899999988 478899999999999999999988763
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecC
Q 013019 393 PNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFIT 436 (451)
Q Consensus 393 ~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yP 436 (451)
..-|..++-.|......++.-.+.|..||++++..+.+ +|.-|
T Consensus 260 GvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~~~~i-~v~v~ 302 (384)
T KOG1368|consen 260 GVLAAAALVALDENVPLLRADHKRAKELAEYINTPEEI-RVEVP 302 (384)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhccccce-eeecc
Confidence 34455555566655556777788899999999976655 33334
No 162
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.83 E-value=9.1e-19 Score=179.16 Aligned_cols=211 Identities=22% Similarity=0.269 Sum_probs=173.7
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC----
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~---- 283 (451)
.|...+||++++++.|..+++.++||+.|+.++++++ +++||+||++..+|..|...+ -..|.+..++|.+
T Consensus 33 G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i----~~~Ga~PVFvDid~~T~ 108 (374)
T COG0399 33 GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAV----LLVGAKPVFVDIDPDTL 108 (374)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHH----HHcCCeEEEEecCCccc
Confidence 5889999999999999999999999999999999966 699999999999999887433 4468888888753
Q ss_pred --CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCC--CcEEEECC--cc
Q 013019 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSA--TK 357 (451)
Q Consensus 284 --D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~G--aDiVv~S~--SK 357 (451)
|++.||++|+++ ||+|+ |.+-.|...|+++|.++|++||++||.|.+.+.+...+.-..| .|+.++|| +|
T Consensus 109 nid~~~ie~aIt~~-tKAIi---pVhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K 184 (374)
T COG0399 109 NIDPDLIEAAITPR-TKAII---PVHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATK 184 (374)
T ss_pred CCCHHHHHHHcccC-CeEEE---EehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCC
Confidence 899999999985 99998 4678899999999999999999999999997655322222223 58899996 68
Q ss_pred cCCccccceeEEEEeCH-HHHHHHHHHhHh--------------hC--CCccHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 013019 358 FIGGHNDVLAGSISGSG-KLVTQIRNLHHV--------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNSTALRM 420 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~--------------~G--~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~L 420 (451)
.+.... ||++++++ ++.++++.++.. .| ..++...|.+.+..|+.++..+++..+++..+
T Consensus 185 ~ittgE---GGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y 261 (374)
T COG0399 185 NLTTGE---GGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIY 261 (374)
T ss_pred CccccC---ceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887653 89998865 677777765431 12 24667778888999999999999999999999
Q ss_pred HHHHHcCCCe
Q 013019 421 AEILEAHPKV 430 (451)
Q Consensus 421 ae~L~~~p~V 430 (451)
.+.|++.+.+
T Consensus 262 ~~~l~~~~~~ 271 (374)
T COG0399 262 AEALKGLPGI 271 (374)
T ss_pred HHHhhcCCCc
Confidence 9999988753
No 163
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.83 E-value=5.4e-19 Score=179.85 Aligned_cols=208 Identities=20% Similarity=0.256 Sum_probs=148.4
Q ss_pred ccCCCchhHHHHHHHHHhhhCCC--cEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 204 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~gae--~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
+.||+++. ..|+++|++.+|.. +.|++++|+ ++|..+ ..++++|| |+++.|+|..... .++..|+++..+
T Consensus 48 ~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l-~~~~~~g~-v~v~~P~y~~y~~----~~~~~g~~~~~v 120 (339)
T PRK06959 48 WRRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRAL-PALLPRGR-VGIAPLAYSEYAP----AFARHGHRVVPL 120 (339)
T ss_pred HHhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHH-HHhcCCCe-EEEcCCCcHHHHH----HHHHCCCEEEee
Confidence 46688887 89999999999973 567777777 777755 45678877 8889999987653 345668887776
Q ss_pred CCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHH---HHhcCCEEEEecCCCCCCccccc----cCCCcEEEE
Q 013019 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDL---CHKKGAIVCIDGTFATPLNQKAL----SLGADLVLH 353 (451)
Q Consensus 281 d~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~Iael---A~~~g~~lVVD~tfa~~~~~~pl----~~GaDiVv~ 353 (451)
+..+ + .+.+ .++++++++|+||||.+.+.+++.++ |++++.++|+||+|.......++ ....-+++.
T Consensus 121 ~~~~-~----~~~~-~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~ 194 (339)
T PRK06959 121 DEAA-D----TLPA-ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLR 194 (339)
T ss_pred cccc-h----hccc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEe
Confidence 6533 2 2333 36799999999999999987666655 55789999999998764321211 112248899
Q ss_pred CCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHcC
Q 013019 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 354 S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~---tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
|+||.++.+| ++.||+++++++++++++.+..++ ++......+...|+ ......++..++.+.+.+.|+++
T Consensus 195 SfSK~~gl~G-lRiGy~v~~~~li~~l~~~~~~~~--vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 268 (339)
T PRK06959 195 SVGKFFGLAG-VRAGFVLAAPALLAALRDALGAWT--VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH 268 (339)
T ss_pred cChhhcCCcc-hheEEEecCHHHHHHHHHhcCCCC--CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999998776 678999999999999988765544 34444443333332 23333456667788888889876
No 164
>PRK08175 aminotransferase; Validated
Probab=99.83 E-value=8.3e-19 Score=181.57 Aligned_cols=211 Identities=15% Similarity=0.165 Sum_probs=147.1
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 212 TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 212 ~~~Lee~LA~l~----ga----e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
...|++.+++++ |. ++.+++++|+ +++..++..++++||+|++++|.|......+ ...|+++..++.
T Consensus 69 ~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~ 144 (395)
T PRK08175 69 IPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGA----VIAGAQVRSVPL 144 (395)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCeEEEEec
Confidence 456777777654 32 3246666666 8998888899999999999999998755333 345777766643
Q ss_pred C----CHHHHHHhhcC--CCeEEEEEeCCCCCccccccH---HHHHHHHHhcCCEEEEecCCCCCCcc----cc---cc-
Q 013019 283 A----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ----KA---LS- 345 (451)
Q Consensus 283 ~----D~d~Le~ai~~--~~tklV~lesPsNPtG~v~DL---~~IaelA~~~g~~lVVD~tfa~~~~~----~p---l~- 345 (451)
. +.++++++++. .++++|++++|+||||.+.+. ++|.++|+++|+++|+|++|...... .+ +.
T Consensus 145 ~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~ 224 (395)
T PRK08175 145 VEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPG 224 (395)
T ss_pred ccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCC
Confidence 2 47888887763 248999999999999999986 78899999999999999997542211 11 11
Q ss_pred -CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH----HHHHHHHHHHHHHHHH
Q 013019 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRM 420 (451)
Q Consensus 346 -~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~----tl~~Rl~~~~~nA~~L 420 (451)
.+..+++.|+||.++.+| .+.||+++++++++++++.+.....+.+......+...++ .+....++..++...+
T Consensus 225 ~~~~~i~~~S~SK~~g~pG-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 303 (395)
T PRK08175 225 AKDVAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVL 303 (395)
T ss_pred cccCEEEEeeccccccCcc-hhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 123467899999998776 5789999999999998877654443333333222222222 2333344555677778
Q ss_pred HHHHHcC
Q 013019 421 AEILEAH 427 (451)
Q Consensus 421 ae~L~~~ 427 (451)
.+.|+++
T Consensus 304 ~~~L~~~ 310 (395)
T PRK08175 304 VKGLHEA 310 (395)
T ss_pred HHHHHHc
Confidence 8888776
No 165
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.83 E-value=1.2e-18 Score=176.89 Aligned_cols=214 Identities=16% Similarity=0.156 Sum_probs=156.2
Q ss_pred hhHHHHHHHHHhhhCC--Cc-EEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 210 PTTVVVEEKMSALEGA--ES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~ga--e~-~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
...+++++.+++++|. ++ .+++++|++|+..++.+++++||+|++..+.|.+.. +...++..|.++.+++.
T Consensus 32 ~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 109 (356)
T cd06451 32 ALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDR--WADMAERYGADVDVVEKPWGE 109 (356)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHH--HHHHHHHhCCCeEEeecCCCC
Confidence 3467899999999997 23 456677899999999999999999999988776531 22345667888777642
Q ss_pred -CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEECCcccCC
Q 013019 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIG 360 (451)
Q Consensus 283 -~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S~SK~l~ 360 (451)
.|+++++++++++++++|++++|+||+|.+.|+++|.++|+++|+++++|++++.+. ..+....|+|+++.|++|+++
T Consensus 110 ~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~ 189 (356)
T cd06451 110 AVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALG 189 (356)
T ss_pred CCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhcc
Confidence 478999999976358999999999999999999999999999999999999875432 233345689999999999999
Q ss_pred ccccceeEEEEeCHHHHHHHHH---Hh----------H------hhCCCccHHHHHHHHHhhHH-----HHHHHHHHHHH
Q 013019 361 GHNDVLAGSISGSGKLVTQIRN---LH----------H------VLGGALNPNAAYLIIRGMKT-----LHLRVQQQNST 416 (451)
Q Consensus 361 G~gdv~gG~Iv~~~eli~~lr~---~~----------~------~~G~~ls~~~a~l~lrgL~t-----l~~Rl~~~~~n 416 (451)
++. .+|+++.++++++++.. .. . ..+.+.+....+.+..+++. +....++..++
T Consensus 190 ~p~--g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~ 267 (356)
T cd06451 190 APP--GLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRL 267 (356)
T ss_pred CCC--CcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 874 36999999988877653 00 0 11122223222222223322 23345566677
Q ss_pred HHHHHHHHHcC
Q 013019 417 ALRMAEILEAH 427 (451)
Q Consensus 417 A~~Lae~L~~~ 427 (451)
+..+.+.|++.
T Consensus 268 ~~~l~~~L~~~ 278 (356)
T cd06451 268 AKALREGLEAL 278 (356)
T ss_pred HHHHHHHHHHc
Confidence 88888888875
No 166
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.82 E-value=1.3e-18 Score=180.87 Aligned_cols=211 Identities=20% Similarity=0.221 Sum_probs=158.2
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d 286 (451)
++...+||++|++++|.+.+++++||++|+..++..+.+ +||.|+..+..|+.+...+ ...|.++..++..|++
T Consensus 89 ~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~----~~~g~~~~~~~~~d~~ 164 (406)
T PRK13393 89 NHYHVLLEAELADLHGKEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGI----RHSRAEKRIFRHNDPA 164 (406)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHH----HHcCCeEEEeCCCCHH
Confidence 456789999999999999999999999999999987765 7888887777777655433 3346677777777888
Q ss_pred HHHHhhc---CCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc---------cccCCCcEEEEC
Q 013019 287 GLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLHS 354 (451)
Q Consensus 287 ~Le~ai~---~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~---------pl~~GaDiVv~S 354 (451)
++++.++ ++++++|++|+++|++|.+.|+++|.++|+++|+++|+|++++.++..+ .+....|+++.|
T Consensus 165 ~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~t 244 (406)
T PRK13393 165 DLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGT 244 (406)
T ss_pred HHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEe
Confidence 8887774 2247899999999999999999999999999999999999976443211 111225788899
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHHhHh--hCCCccHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--~G~~ls~~~a~l~lrgL~tl---~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
++|.+++. ||++++++++++.++..... ++...++..+..+...|+.+ ..+.++..++.+.+.+.|++.
T Consensus 245 lsKa~g~~----GG~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (406)
T PRK13393 245 LAKAFGVM----GGYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA 318 (406)
T ss_pred Cchhhccc----CceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Confidence 99999875 58999999998888765543 24455665555444444433 233355567778888888764
No 167
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.82 E-value=8.9e-19 Score=185.81 Aligned_cols=217 Identities=15% Similarity=0.234 Sum_probs=147.9
Q ss_pred cCCCch-hHHHHHHHHHhhhC---------CCcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcC
Q 013019 205 GRYGNP-TTVVVEEKMSALEG---------AESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (451)
Q Consensus 205 ~R~~np-t~~~Lee~LA~l~g---------ae~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~ 273 (451)
.+|+++ ....|++.||++++ ..+.|++++|+ +++..++.+++++||.|++++|.|......+. ...
T Consensus 80 ~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~---~~~ 156 (468)
T PLN02450 80 ALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLK---WRT 156 (468)
T ss_pred hcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHh---hcC
Confidence 345444 24468888888763 13346666666 89999999999999999999999988654332 135
Q ss_pred CcEEEEeCC-------CCHHHHHHhhcC-----CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCC
Q 013019 274 GITATVIDP-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP 338 (451)
Q Consensus 274 Gi~v~~vd~-------~D~d~Le~ai~~-----~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~ 338 (451)
|+++..++. .|++++++++++ .++++|++++|+||||.+++ +++|.++|+++|++||+||+|+..
T Consensus 157 g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~ 236 (468)
T PLN02450 157 GVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGT 236 (468)
T ss_pred CcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcccccc
Confidence 776665542 256888887753 25899999999999999986 567888899999999999998743
Q ss_pred Ccc-----cccc------------CCCcEEEECCcccCCccccceeEEEEeCHH-HHHHHHHHhHhhCCCccHHHHHHHH
Q 013019 339 LNQ-----KALS------------LGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHVLGGALNPNAAYLII 400 (451)
Q Consensus 339 ~~~-----~pl~------------~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~e-li~~lr~~~~~~G~~ls~~~a~l~l 400 (451)
... ..+. ...-+++.|+||.++.+| ++.|+++++++ +++.+..... .+ .++......+.
T Consensus 237 ~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~G-lRiG~li~~~~~l~~~~~~~~~-~~-~~s~~~Q~a~~ 313 (468)
T PLN02450 237 VFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPG-FRVGAIYSNDEMVVSAATKMSS-FG-LVSSQTQYLLS 313 (468)
T ss_pred ccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCC-ccEEEEEECCHHHHHHHHHHhh-cC-CCCHHHHHHHH
Confidence 211 1111 123488999999998666 67899999754 4555554432 22 23444444433
Q ss_pred HhhH-------HHHHHHHHHHHHHHHHHHHHHcC
Q 013019 401 RGMK-------TLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 401 rgL~-------tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
..|+ .+....++..++.+.+.+.|+++
T Consensus 314 ~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~ 347 (468)
T PLN02450 314 ALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA 347 (468)
T ss_pred HHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3332 23344566667777888888876
No 168
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.82 E-value=1.4e-18 Score=180.38 Aligned_cols=212 Identities=20% Similarity=0.222 Sum_probs=157.9
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCH
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~ 285 (451)
.++...+||++|++++|.+.+++++||++|+..++..+.. +++.|+.....|...... +...++++..++..|+
T Consensus 89 ~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~----~~~~~~~~~~~~~~d~ 164 (407)
T PRK09064 89 TNHYHVELERELADLHGKEAALVFTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEG----IRRSRCEKHIFRHNDV 164 (407)
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHH----HHHcCCcEEEECCCCH
Confidence 3678899999999999988999999999998888877654 677676665555544322 2345666666667788
Q ss_pred HHHHHhhcC---CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc---------cccCCCcEEEE
Q 013019 286 EGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLH 353 (451)
Q Consensus 286 d~Le~ai~~---~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~---------pl~~GaDiVv~ 353 (451)
+++++.++. .++++|++|+|+||+|.+.|+++|.++|+++|++||+||+|+.+...+ .+....|+++.
T Consensus 165 ~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~ 244 (407)
T PRK09064 165 AHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEG 244 (407)
T ss_pred HHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEE
Confidence 888887752 248999999999999999999999999999999999999986432111 11113589999
Q ss_pred CCcccCCccccceeEEEEeCHHHHHHHHHHhHhh--CCCccHHHHHHHHHhhHHHH---HHHHHHHHHHHHHHHHHHcC
Q 013019 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL--GGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 354 S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~--G~~ls~~~a~l~lrgL~tl~---~Rl~~~~~nA~~Lae~L~~~ 427 (451)
|++|.++.. ||++++++++++.++.....+ ....++..+..++..++.+. ...++..++...+.+.|++.
T Consensus 245 t~sKa~g~~----GG~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (407)
T PRK09064 245 TLAKAFGVM----GGYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA 319 (407)
T ss_pred ecchhhhcc----CceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 999999865 589999999988887654322 33456666555555665543 23566777888888888764
No 169
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.82 E-value=2.6e-18 Score=180.78 Aligned_cols=209 Identities=19% Similarity=0.211 Sum_probs=164.3
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH---------ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEE
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al---------l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~ 279 (451)
.+...+||++|++++|.+.+++++||++|+..++.++ +++||+||++.+.|..+...+ ...|.++.+
T Consensus 62 G~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v----~~~G~~pv~ 137 (438)
T PRK15407 62 GRFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPI----IQNGLVPVF 137 (438)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHH----HHcCCEEEE
Confidence 4678899999999999999999999999999988876 478999999999998876443 345777776
Q ss_pred eCC------CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc--cc-cccCCCcE
Q 013019 280 IDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--QK-ALSLGADL 350 (451)
Q Consensus 280 vd~------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~--~~-pl~~GaDi 350 (451)
+|. .|+++++++++++ +++|++++ ++|...|+++|.++|+++|++||+|++++.+.. .+ ...+| |+
T Consensus 138 vdvd~~~~~id~~~le~~i~~~-tkaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g-d~ 212 (438)
T PRK15407 138 VDVELPTYNIDASLLEAAVSPK-TKAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG-DI 212 (438)
T ss_pred EecCCCcCCcCHHHHHHHcCcC-CeEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC-ce
Confidence 653 3789999999874 99999854 468888999999999999999999999876532 22 22333 99
Q ss_pred EEECCc--ccCCccccceeEEEEeCH-HHHHHHHHHhHh-------------------------------------hC--
Q 013019 351 VLHSAT--KFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-------------------------------------LG-- 388 (451)
Q Consensus 351 Vv~S~S--K~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~-------------------------------------~G-- 388 (451)
.++|++ |.+.... ||++++++ ++.++++..+.. .|
T Consensus 213 ~~fSf~~~k~~~~ge---GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n 289 (438)
T PRK15407 213 ATLSFYPAHHITMGE---GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYN 289 (438)
T ss_pred EEEeCCCCCCccccC---ceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccc
Confidence 999975 6565432 78888875 455555543320 12
Q ss_pred CCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 013019 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPK 429 (451)
Q Consensus 389 ~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~ 429 (451)
..++.+.|.+.+..|+.++.++++..++++.+.+.|.+.++
T Consensus 290 ~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~ 330 (438)
T PRK15407 290 LKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLED 330 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 24677888999999999999999999999999999988774
No 170
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.82 E-value=2.5e-18 Score=182.88 Aligned_cols=215 Identities=17% Similarity=0.170 Sum_probs=147.3
Q ss_pred HHHHHHHHHhhhC----C---CcEEEeCCHH-HHHHHHHHHHc-cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-
Q 013019 212 TVVVEEKMSALEG----A---ESTVIMASGM-SASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (451)
Q Consensus 212 ~~~Lee~LA~l~g----a---e~~vv~sSG~-aAi~~al~all-~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd- 281 (451)
...|++.|+++++ . ++.|++++|. +++..++.+++ ++||+|++++|.|......+ +..|.++..++
T Consensus 117 ~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~----~~~g~~~v~v~~ 192 (481)
T PTZ00377 117 YPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAI----TLLGGKQVPYYL 192 (481)
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHH----HHcCCEEEEEEe
Confidence 5567777777653 1 3345555555 99999999998 79999999999999865433 44566555443
Q ss_pred ------CCCHHHHHHhhcC-----CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc-c--c--
Q 013019 282 ------PADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-Q--K-- 342 (451)
Q Consensus 282 ------~~D~d~Le~ai~~-----~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~-~--~-- 342 (451)
..|+++|++++++ .++|+|++++|+||||.+++ +++|+++|+++|++||+|++|..... . .
T Consensus 193 ~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~ 272 (481)
T PTZ00377 193 DEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFI 272 (481)
T ss_pred ccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcc
Confidence 1368999998864 14899999999999999997 78899999999999999999865321 0 0
Q ss_pred cc-----cCC-------CcEEEECCcccC-CccccceeEEEEe---CHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH--
Q 013019 343 AL-----SLG-------ADLVLHSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-- 404 (451)
Q Consensus 343 pl-----~~G-------aDiVv~S~SK~l-~G~gdv~gG~Iv~---~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~-- 404 (451)
++ .+. .-++++|+||.+ +.+| .++||+++ ++++++++...+.. ..+.+.....++...++
T Consensus 273 s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~G-lRiG~~~~~~~p~~li~~l~~~~~~-~~~~~~~~Q~a~~~~l~~~ 350 (481)
T PTZ00377 273 SFRKVLLELPAEYNTDVELVSFHSTSKGIIGECG-RRGGYFELTNIPPEVREQIYKLASI-NLCSNVVGQLMTGLMCNPP 350 (481)
T ss_pred cHHHHHHhhcccccCCeEEEEEecCCcccccCCc-CceEEEEEeCCCHHHHHHHHHHhhe-ecCCChHHHHHHHHHhCCC
Confidence 10 111 137889999975 5444 56888886 88999988876643 22344444444333331
Q ss_pred --------HHHHHH----HHHHHHHHHHHHHHHcCCCeEE
Q 013019 405 --------TLHLRV----QQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 405 --------tl~~Rl----~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
.....+ ++..++...+.+.|+++|++..
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~ 390 (481)
T PTZ00377 351 REGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSC 390 (481)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEe
Confidence 122222 2345677788899988877643
No 171
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.82 E-value=1.4e-18 Score=177.60 Aligned_cols=216 Identities=15% Similarity=0.115 Sum_probs=151.9
Q ss_pred cCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
.+|+.+....|++.||++++. ++.|++++|+ +++..++.++. +||+|++++|+|..... .++..|+++..++.
T Consensus 52 ~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~~----~~~~~g~~~~~v~~ 126 (360)
T PRK07392 52 RHYPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGRELA-QLRAVYLITPAFGDYRR----ALRAFGATVKELPL 126 (360)
T ss_pred hcCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhC-CCCeEEEECCCcHHHHH----HHHHcCCeEEEEec
Confidence 445666667899999999975 3445556655 89988888765 68999999999988653 34456776655532
Q ss_pred ----------CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc---cc-c---c
Q 013019 283 ----------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KA-L---S 345 (451)
Q Consensus 283 ----------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~---~p-l---~ 345 (451)
.+++++++.. + +++++++++|+||||.+++.++|.++++++++ +|+||+|...... .+ + .
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~ 203 (360)
T PRK07392 127 PLDQPSPGLTLRLQTLPPQL-T-PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLA 203 (360)
T ss_pred ccccCCcccccCHHHHHHhc-c-CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhh
Confidence 2355555543 2 47999999999999999999999999999985 6779998654211 11 1 1
Q ss_pred -CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH---HHHHHHHHHHHHHHHH
Q 013019 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMA 421 (451)
Q Consensus 346 -~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t---l~~Rl~~~~~nA~~La 421 (451)
...-+++.|+||.++.+| ++.||++++++++++++..+.. ..++....+++...++. .....+...++.+.+.
T Consensus 204 ~~~~vi~i~S~SK~~~l~G-lRiG~~v~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~ 280 (360)
T PRK07392 204 EYPNLIILRSLTKFYSLPG-LRLGYAIAHPDRLQRWQQWRDP--WPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALF 280 (360)
T ss_pred cCCCEEEEEechhhhcCCc-hheeeeeCCHHHHHHHHhhCCC--CCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 123488999999998776 6789999999998888765532 34556665555544432 2222344556777888
Q ss_pred HHHHcCCCeE
Q 013019 422 EILEAHPKVL 431 (451)
Q Consensus 422 e~L~~~p~V~ 431 (451)
+.|+.++++.
T Consensus 281 ~~L~~~~~~~ 290 (360)
T PRK07392 281 QGLASLPGLT 290 (360)
T ss_pred HHHHhCCCcE
Confidence 8898877653
No 172
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.82 E-value=2.4e-18 Score=175.79 Aligned_cols=216 Identities=14% Similarity=0.206 Sum_probs=153.0
Q ss_pred ccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
..+|+++....|+++++++++. .+.+++++|+ +++..++.++ .+ +.|++++|+|+.... .+...|.++..++
T Consensus 48 ~~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~~~~----~~~~~g~~~~~~~ 121 (354)
T PRK06358 48 LVEYPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT-KP-KKVLILAPTFAEYER----ALKAFDAEIEYAE 121 (354)
T ss_pred hhcCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh-CC-CcEEEecCChHHHHH----HHHHcCCeeEEEe
Confidence 3456777778999999999976 3456666666 8888888775 44 689999999986543 3445677766553
Q ss_pred C-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc----cc---
Q 013019 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL--- 344 (451)
Q Consensus 282 ~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~----pl--- 344 (451)
. .| +++.+.+.+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....... ++
T Consensus 122 ~~~~~~~~~d-~~~~~~~~~-~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 199 (354)
T PRK06358 122 LTEETNFAAN-EIVLEEIKE-EIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYL 199 (354)
T ss_pred CccccCCCcc-HHHHHhhcc-CCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhc
Confidence 2 24 455555655 4899999999999999996 7788888999999999999986543211 11
Q ss_pred c-CCCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHHHHHH
Q 013019 345 S-LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALR 419 (451)
Q Consensus 345 ~-~GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~ 419 (451)
. ...-+++.|+||.++.+| ++.||+++ +++++++++..+..+ .++....+++...+ +.+...++...++.+.
T Consensus 200 ~~~~~vi~~~S~SK~~gl~G-~RiG~lv~~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 276 (354)
T PRK06358 200 ENFKNLIIIRAFTKFFAIPG-LRLGYGLTSNKNLAEKLLQMREPW--SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDF 276 (354)
T ss_pred cCCCCEEEEEechhhccCcc-hhheeeecCCHHHHHHHHHhCCCC--cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 1 123488999999998776 67899887 567888887766433 34555545444444 2344455666777888
Q ss_pred HHHHHHcCCCe
Q 013019 420 MAEILEAHPKV 430 (451)
Q Consensus 420 Lae~L~~~p~V 430 (451)
+.+.|++++++
T Consensus 277 l~~~L~~~~~~ 287 (354)
T PRK06358 277 LYNGLSEFKGI 287 (354)
T ss_pred HHHHHhcCCCc
Confidence 99999887764
No 173
>PLN02822 serine palmitoyltransferase
Probab=99.82 E-value=2.1e-18 Score=183.52 Aligned_cols=214 Identities=17% Similarity=0.167 Sum_probs=163.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~L 288 (451)
++...+||++|+++++.++++++++|..++..++.+++++||.|++....|..+.. .+...+.++.+++..|.+++
T Consensus 153 ~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~----~~~ls~~~~~~~~~nd~~~l 228 (481)
T PLN02822 153 IDVHLDCETKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWGIQN----GLYLSRSTIVYFKHNDMESL 228 (481)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCCccHHHHH----HHHHcCCeEEEECCCCHHHH
Confidence 46688999999999999899999999988999999999999999998877766543 23334667778887777777
Q ss_pred HHhhcC--------CCe-EEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc-------ccc---CCCc
Q 013019 289 EAALNN--------NNV-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-------ALS---LGAD 349 (451)
Q Consensus 289 e~ai~~--------~~t-klV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~-------pl~---~GaD 349 (451)
+..+++ .++ ++|++|++.|++|.+.|+++|.++|++||+++|+||+++.+...+ -.. ...|
T Consensus 229 ~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~d 308 (481)
T PLN02822 229 RNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKID 308 (481)
T ss_pred HHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCe
Confidence 665531 124 799999999999999999999999999999999999987543221 111 1368
Q ss_pred EEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH--hhCCCccHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHH
Q 013019 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 350 iVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--~~G~~ls~~~a~l~lrgL~tl---~~Rl~~~~~nA~~Lae~L 424 (451)
|++.|++|.++.. ||++++++++++.++.... .++..+++..+..++..|+.+ ...+++..++.+.+.+.|
T Consensus 309 ii~~s~sKalg~~----GG~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L 384 (481)
T PLN02822 309 IITAAMGHALATE----GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGL 384 (481)
T ss_pred EEEecchhhhhhC----CeEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 9999999999855 5899999999988775332 234445566555544455433 446677888999999999
Q ss_pred HcCCCe
Q 013019 425 EAHPKV 430 (451)
Q Consensus 425 ~~~p~V 430 (451)
++.+++
T Consensus 385 ~~~~g~ 390 (481)
T PLN02822 385 SDIPGL 390 (481)
T ss_pred HhcCCc
Confidence 876443
No 174
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.81 E-value=2.8e-18 Score=171.61 Aligned_cols=249 Identities=20% Similarity=0.215 Sum_probs=184.9
Q ss_pred cccCCCccCCHHHHHHHHhcc-cCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcC
Q 013019 178 VNTSAYFFKKTAELIDFKEKR-RASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTT 256 (451)
Q Consensus 178 ~~sst~~~~~~~~~~~~~~~~-~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~ 256 (451)
+.|+++.-+..+.++.+...+ ...-.|| .+|+..++|+++++++|.+.+++++||++|+.++|.+.++||+.||+..
T Consensus 4 f~SDn~~g~~~~m~eam~~a~~~~~~~YG--~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~ 81 (342)
T COG2008 4 FRSDNVAGPTPEMREALAAANAVGDDVYG--EDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQPGESVICHE 81 (342)
T ss_pred cccCccCCCCHHHHHHHHhccccCCCCCC--CCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcCCCCeEEEec
Confidence 567788878777777666555 4455676 6799999999999999999999999999999999999999999999998
Q ss_pred CCCcchHHHHHHhhhcC--CcEEEEeC----CCCHHHHHHhhcCC-----CeEEEEEeCCCCCcccccc---HHHHHHHH
Q 013019 257 DCYRKTRIFIETVLPKM--GITATVID----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDLC 322 (451)
Q Consensus 257 ~~Y~~t~~~l~~~l~~~--Gi~v~~vd----~~D~d~Le~ai~~~-----~tklV~lesPsNPtG~v~D---L~~IaelA 322 (451)
..|-.+++.- ..+.+ +.++..++ ..++++|+.++.++ ++.++++++..|..|++++ |++|.++|
T Consensus 82 ~aHi~~~E~G--a~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~ 159 (342)
T COG2008 82 TAHIYTDECG--APEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVC 159 (342)
T ss_pred cccceecccC--cHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHH
Confidence 8875544211 11222 23333333 24799999988642 3677888787777899987 56788889
Q ss_pred HhcCCEEEEecCC------CCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccH--H
Q 013019 323 HKKGAIVCIDGTF------ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP--N 394 (451)
Q Consensus 323 ~~~g~~lVVD~tf------a~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~--~ 394 (451)
|++|++|++|.+- +..........++|++...+||.++.+. +.+++++.+++++++.++...|+.+.. +
T Consensus 160 k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~ 236 (342)
T COG2008 160 KEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLMRKARF 236 (342)
T ss_pred HHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccHhhhhH
Confidence 9999999999981 1122233345689999999999998874 667789999999999999988876543 2
Q ss_pred HHHHHHHhhHHHHHHHHHHHHH--HHHHHHHHHcCCCeEEE
Q 013019 395 AAYLIIRGMKTLHLRVQQQNST--ALRMAEILEAHPKVLLL 433 (451)
Q Consensus 395 ~a~l~lrgL~tl~~Rl~~~~~n--A~~Lae~L~~~p~V~~V 433 (451)
-+...+..|+.-.-++....+| |++|++.|+..|+++..
T Consensus 237 laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~ 277 (342)
T COG2008 237 LAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLA 277 (342)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceec
Confidence 2333334455544455555677 99999999988887553
No 175
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.81 E-value=2.7e-18 Score=171.68 Aligned_cols=218 Identities=17% Similarity=0.215 Sum_probs=157.9
Q ss_pred CCchhHHHHHHHHHhhhCC--------CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEE
Q 013019 207 YGNPTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga--------e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~ 278 (451)
...+....+++.++++++. ++.+++++|++++..++.++.++||+|+++++.|.+.... ++..|.++.
T Consensus 33 ~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~----~~~~~~~~~ 108 (350)
T cd00609 33 YPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAA----ARLAGAEVV 108 (350)
T ss_pred CCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHCCCEEE
Confidence 3445566677777776653 3567777888999999999999999999999999987644 445677776
Q ss_pred EeCCC-----CH--HHHHHhhcCCCeEEEEEeCCCCCccccccHHH---HHHHHHhcCCEEEEecCCCCCCc--------
Q 013019 279 VIDPA-----DM--EGLEAALNNNNVSLFFTESPTNPFLRCVDVKL---VSDLCHKKGAIVCIDGTFATPLN-------- 340 (451)
Q Consensus 279 ~vd~~-----D~--d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~---IaelA~~~g~~lVVD~tfa~~~~-------- 340 (451)
.++.. +. +.++..+++ ++++|++++|+||+|.+.|+++ |.++|+++|+++|+|++++.+..
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~-~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~ 187 (350)
T cd00609 109 PVPLDEEGGFLLDLELLEAAKTP-KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPAL 187 (350)
T ss_pred EEecccccCCccCHHHHHhhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccc
Confidence 66532 12 556666655 4999999999999999997554 55899999999999999765321
Q ss_pred cccccCCCcEEEECCcccCCccccceeEEEEeCH-HHHHHHHHHhHhhCCCccHHHHHHHHHhhH----HHHHHHHHHHH
Q 013019 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNS 415 (451)
Q Consensus 341 ~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~~G~~ls~~~a~l~lrgL~----tl~~Rl~~~~~ 415 (451)
......+.|+++.|++|+++.++ ..+|++++++ ++++.++......+...+...+..+...++ .+....+++.+
T Consensus 188 ~~~~~~~~~~~~~s~~K~~~~~g-~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 266 (350)
T cd00609 188 ALLDAYERVIVLRSFSKTFGLPG-LRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRR 266 (350)
T ss_pred cCcCccCcEEEEeecccccCCcc-cceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 12334568999999999997333 4689999998 788888877665444455554444433333 33444566778
Q ss_pred HHHHHHHHHHcCCCe
Q 013019 416 TALRMAEILEAHPKV 430 (451)
Q Consensus 416 nA~~Lae~L~~~p~V 430 (451)
+++.+.+.|++++..
T Consensus 267 ~~~~l~~~L~~~~~~ 281 (350)
T cd00609 267 RRDALLEALKELGPL 281 (350)
T ss_pred HHHHHHHHHHhcCCc
Confidence 888999999987654
No 176
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.81 E-value=6e-18 Score=175.72 Aligned_cols=211 Identities=14% Similarity=0.129 Sum_probs=142.6
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-
Q 013019 212 TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (451)
Q Consensus 212 ~~~Lee~LA~l~----ga----e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd- 281 (451)
...|++.+++++ |. ++.+++++|+ +++..++.+++++||.|++++|+|...... +...|.++..++
T Consensus 73 ~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~ 148 (403)
T PRK08636 73 IYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQA----FILAGGNVHKMPL 148 (403)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH----HHhcCCEEEEEec
Confidence 345666666654 52 3246666665 999999999999999999999999986543 344577665543
Q ss_pred ------CCCHH----HHHHhhcC--CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----c
Q 013019 282 ------PADME----GLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----K 342 (451)
Q Consensus 282 ------~~D~d----~Le~ai~~--~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~ 342 (451)
..|++ .+++++++ .++++|++++|+||||.+++ +++|.++|++|+++||+|++|...... .
T Consensus 149 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~ 228 (403)
T PRK08636 149 EYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTP 228 (403)
T ss_pred cccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCC
Confidence 23444 45666642 25899999999999999986 578888999999999999998753211 1
Q ss_pred c---ccC--CCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHH---HHHHHHh-hHHHHHHHHHH
Q 013019 343 A---LSL--GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNA---AYLIIRG-MKTLHLRVQQQ 413 (451)
Q Consensus 343 p---l~~--GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~---a~l~lrg-L~tl~~Rl~~~ 413 (451)
+ ++. ...+++.|+||.++.+| ++.||++++++++++++..........+... +..++.+ .+.+....+..
T Consensus 229 ~~~~~~~~~~~~i~~~S~SK~~~~~G-lRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~ 307 (403)
T PRK08636 229 SILEVEGAKDVAVESYTLSKSYNMAG-WRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETY 307 (403)
T ss_pred ChhcCCCccccEEEEEecccccCCcc-ceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 1 111 12355789999998776 6899999999999988876654322222222 2222222 22333334455
Q ss_pred HHHHHHHHHHHHcC
Q 013019 414 NSTALRMAEILEAH 427 (451)
Q Consensus 414 ~~nA~~Lae~L~~~ 427 (451)
.++...+.+.|+++
T Consensus 308 ~~~~~~l~~~L~~~ 321 (403)
T PRK08636 308 RKRRDVLIESFANA 321 (403)
T ss_pred HHHHHHHHHHHHHC
Confidence 66777788888875
No 177
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.81 E-value=1.1e-18 Score=177.58 Aligned_cols=231 Identities=18% Similarity=0.211 Sum_probs=170.3
Q ss_pred HhcccCCccccCCCchhHHHHHHHHHhhhCC-CcEEEe-CCHHHHHHHHHHHH--c----cCCCeEEEcCCCCcchHHHH
Q 013019 195 KEKRRASFEYGRYGNPTTVVVEEKMSALEGA-ESTVIM-ASGMSASTVMLLAL--V----PAGGHIVTTTDCYRKTRIFI 266 (451)
Q Consensus 195 ~~~~~~~~~Y~R~~npt~~~Lee~LA~l~ga-e~~vv~-sSG~aAi~~al~al--l----~~GD~VIv~~~~Y~~t~~~l 266 (451)
+.++.+.|.|||......+..++.+|++.|+ +..++| ++|++++.+++... . +.|.|||++.-.|......+
T Consensus 29 fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~ 108 (386)
T COG1104 29 FGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTC 108 (386)
T ss_pred cCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHH
Confidence 4566667889888888889999999999997 334555 55559988888762 2 24789999999999988877
Q ss_pred HHhhhcCCcEEEEeCCC-----CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC-Cc
Q 013019 267 ETVLPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LN 340 (451)
Q Consensus 267 ~~~l~~~Gi~v~~vd~~-----D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~-~~ 340 (451)
+.. +..|++|++++++ |+++|+++|+++ |.+|.+...||.+|.++||++|.++|+++|+++++|.+++.+ +.
T Consensus 109 ~~L-e~~g~~Vtyl~V~~~G~v~~e~L~~al~~~-T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkip 186 (386)
T COG1104 109 RYL-ERQGFEVTYLPVDSNGLVDLEQLEEALRPD-TILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIP 186 (386)
T ss_pred HHH-HhcCCeEEEeCCCCCCeEcHHHHHHhcCCC-ceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCcee
Confidence 655 7789999998764 799999999985 999999999999999999999999999999999999998765 34
Q ss_pred cccccCCCcEEEECCcccCCccccceeEEEEeCHHHH-HH-HHHHhH---hhCCCc--cHHHH--HHHHHhhHHHHHHHH
Q 013019 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLV-TQ-IRNLHH---VLGGAL--NPNAA--YLIIRGMKTLHLRVQ 411 (451)
Q Consensus 341 ~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli-~~-lr~~~~---~~G~~l--s~~~a--~l~lrgL~tl~~Rl~ 411 (451)
.+...+++|++..|.||+.|..| .|+++.++... +. +..-.+ ...++. ....+ ..+....+.+....+
T Consensus 187 i~~~~~~vD~ls~SaHK~~GpkG---iGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~ 263 (386)
T COG1104 187 IDLEELGVDLLSFSAHKFGGPKG---IGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENA 263 (386)
T ss_pred ccccccCcceEEeehhhccCCCc---eEEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456689999999999998877 67777654321 11 110000 011111 12211 122334556666667
Q ss_pred HHHHHHHHHHHHHHcC-CCe
Q 013019 412 QQNSTALRMAEILEAH-PKV 430 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~~-p~V 430 (451)
+..+...+|.+.|.+. |.+
T Consensus 264 ~~~~lr~~l~~~l~~~~p~~ 283 (386)
T COG1104 264 RLRKLRDRLEDGLLEIIPDV 283 (386)
T ss_pred HHHHHHHHHHHHHHhcCCcE
Confidence 7777777888888765 555
No 178
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=2.8e-18 Score=175.06 Aligned_cols=212 Identities=13% Similarity=0.126 Sum_probs=144.4
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
+|+++....|++.|++.++. .+.+++++|. +++..++.+++++||+|++++|+|..... .....|..+..++.
T Consensus 61 ~Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~----~~~~~g~~~~~~~l~ 136 (357)
T PRK14809 61 SYPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGM----SARYHHGEVREYPVS 136 (357)
T ss_pred cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH----HHHHcCCeEEEEecc
Confidence 34555567899999999985 4456666665 89999999999999999999999975332 22334555544322
Q ss_pred ------CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc--CCEEEEecCCCCCCcccc-c---c-CCCc
Q 013019 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQKA-L---S-LGAD 349 (451)
Q Consensus 283 ------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~--g~~lVVD~tfa~~~~~~p-l---~-~GaD 349 (451)
.+.+++++.+. ++++|++++|+||||.+++.+++.++++.. +++||+||+|........ . + ....
T Consensus 137 ~~~~~~~~~~~~~~~~~--~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~v 214 (357)
T PRK14809 137 KADDFEQTADTVLDAYD--GERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDV 214 (357)
T ss_pred cCcCCCcCHHHHHHhhc--CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCE
Confidence 24566666553 379999999999999999988777777653 789999999875422111 1 1 1234
Q ss_pred EEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHc
Q 013019 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAEILEA 426 (451)
Q Consensus 350 iVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~Lae~L~~ 426 (451)
+++.|+||.++.+| ++.||+++++++++++++....+ .++...+..++..+ +.+....+...++...+.+.|..
T Consensus 215 i~~~SfSK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 291 (357)
T PRK14809 215 AVLRTFSKAYGLAG-LRLGYAVVPEEWADAYARVNTPF--AASELACRAGLAALDDDEHVERTVETARWAREYIREELDA 291 (357)
T ss_pred EEEecchhHhcCcc-hhheeeecCHHHHHHHHHhCCCC--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 78899999998776 57899999999999888765433 34555544444443 22333334444455556666643
No 179
>PRK02948 cysteine desulfurase; Provisional
Probab=99.81 E-value=1.3e-18 Score=178.80 Aligned_cols=215 Identities=16% Similarity=0.179 Sum_probs=153.2
Q ss_pred chhHHHHHHHHHhhhCC-CcEEEeCCH-HHHHHHHHHHHc----cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 209 NPTTVVVEEKMSALEGA-ESTVIMASG-MSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 209 npt~~~Lee~LA~l~ga-e~~vv~sSG-~aAi~~al~all----~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
....+.+++.+++++|. ++.+++++| ++++..++.+++ ++||+|+++...|.+..... ..++..|+++..++.
T Consensus 42 ~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~-~~~~~~g~~v~~v~~ 120 (381)
T PRK02948 42 SSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYF-QSLESQGYTVTEIPV 120 (381)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHH-HHHHhCCCEEEEEee
Confidence 34467889999999985 456666555 688888887775 57899999998888766554 345667888777653
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEEECCc
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSAT 356 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv~S~S 356 (451)
.|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+++++|+++..+ ...+..++|+|+++.|++
T Consensus 121 ~~~~~~d~~~l~~~l~~~-~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~ 199 (381)
T PRK02948 121 DKSGLIRLVDLERAITPD-TVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAH 199 (381)
T ss_pred CCCCCCCHHHHHHhcCCC-CEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccCCCCEEEecHH
Confidence 3789999999774 899999999999999999999999999999999999875433 222333568999999999
Q ss_pred ccCCccccceeEEEEeCHHH-HHHHHH----HhHhhCCCccHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 357 KFIGGHNDVLAGSISGSGKL-VTQIRN----LHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~~el-i~~lr~----~~~~~G~~ls~~~a~l~lrgL----~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
|+++.+| .|+++.++++ +..+.. .......+++......+..++ +.+..+.++..+++..+.+.|++.
T Consensus 200 K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 276 (381)
T PRK02948 200 KIYGPKG---VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTL 276 (381)
T ss_pred hcCCCCc---EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9988776 6777777653 111110 000112233333333222232 444555677778888888888887
Q ss_pred C
Q 013019 428 P 428 (451)
Q Consensus 428 p 428 (451)
+
T Consensus 277 ~ 277 (381)
T PRK02948 277 P 277 (381)
T ss_pred C
Confidence 4
No 180
>PRK14012 cysteine desulfurase; Provisional
Probab=99.81 E-value=3.1e-18 Score=177.83 Aligned_cols=217 Identities=18% Similarity=0.252 Sum_probs=151.6
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc----cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all----~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
+..+++|+++++++|.+ +.+++++|++++..++.++. ++||+|++++..|.+....+. .++..|+++.+++.
T Consensus 49 ~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~-~~~~~g~~~~~v~~~ 127 (404)
T PRK14012 49 EAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCR-QLEREGFEVTYLDPQ 127 (404)
T ss_pred HHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHH-HHHhCCCEEEEEccC
Confidence 45678899999999974 36677777899988887764 789999999999988665443 33456888887754
Q ss_pred ----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECCcc
Q 013019 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 357 (451)
Q Consensus 283 ----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~SK 357 (451)
.|+++|+++++++ +++|++++++||||.+.|+++|.++|+++|+++++|++++.+.. .+....++|+++.|++|
T Consensus 128 ~~g~~d~~~l~~~i~~~-t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K 206 (404)
T PRK14012 128 SNGIIDLEKLEAAMRDD-TILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHK 206 (404)
T ss_pred CCCcCCHHHHHHhcCCC-CEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhh
Confidence 3799999999875 99999999999999999999999999999999999999876533 23335689999999999
Q ss_pred cCCccccceeEEEEeCHHHHHHHHHHhH-------hhCCCccHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHHc
Q 013019 358 FIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAEILEA 426 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~~eli~~lr~~~~-------~~G~~ls~~~a~l~lrgL~----tl~~Rl~~~~~nA~~Lae~L~~ 426 (451)
.+++.+ .|+++.+++...++..... ...++.+......+..+++ .+..+.+++.+.++.+.+.|++
T Consensus 207 ~~gp~g---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~ 283 (404)
T PRK14012 207 IYGPKG---IGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKD 283 (404)
T ss_pred ccCCCc---eEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Confidence 876544 4555544433222211100 0011111111111111222 2333456667778888888888
Q ss_pred CCCeE
Q 013019 427 HPKVL 431 (451)
Q Consensus 427 ~p~V~ 431 (451)
.+.+.
T Consensus 284 ~~~i~ 288 (404)
T PRK14012 284 IEEVY 288 (404)
T ss_pred CCCEE
Confidence 88775
No 181
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.81 E-value=3.4e-18 Score=177.91 Aligned_cols=214 Identities=21% Similarity=0.209 Sum_probs=151.2
Q ss_pred CchhHHHHHH----HHHhhhCCCcE-EEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHH-hhhcCCcEEEEeC
Q 013019 208 GNPTTVVVEE----KMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVID 281 (451)
Q Consensus 208 ~npt~~~Lee----~LA~l~gae~~-vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~-~l~~~Gi~v~~vd 281 (451)
+++..+.+|+ .+++++|.+.. ++++||++|+..++.+++++||+|+++.++|++....... .+...|.++..++
T Consensus 65 ~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (416)
T PRK00011 65 GCEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYG 144 (416)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCceeeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecC
Confidence 4455666666 88999998665 6668999999999999999999999999999764321111 1223345555543
Q ss_pred ------CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-----cccccCCCcE
Q 013019 282 ------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADL 350 (451)
Q Consensus 282 ------~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-----~~pl~~GaDi 350 (451)
..|++++++++++.++++|+++.+. +|...|+++|.++|+++|+++|+|++++.+.. ..++. ++|+
T Consensus 145 ~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~--~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di 221 (416)
T PRK00011 145 VDEETGLIDYDEVEKLALEHKPKLIIAGASA--YSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADV 221 (416)
T ss_pred cCcccCCcCHHHHHHHHHhcCCCEEEECCCc--CCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcE
Confidence 2478999999975358999986554 45667999999999999999999999754321 23344 7899
Q ss_pred EEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhh--CCCccHHHHHH---HHHhh-HHHHHHHHHHHHHHHHHHHH
Q 013019 351 VLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL--GGALNPNAAYL---IIRGM-KTLHLRVQQQNSTALRMAEI 423 (451)
Q Consensus 351 Vv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~--G~~ls~~~a~l---~lrgL-~tl~~Rl~~~~~nA~~Lae~ 423 (451)
++.|++|+++|+. ||+++++ ++++++++...... +.......+.+ +...+ +.+..+++++.++++.+.+.
T Consensus 222 ~~~S~~K~l~g~~---gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~ 298 (416)
T PRK00011 222 VTTTTHKTLRGPR---GGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEA 298 (416)
T ss_pred EEecCCcCCCCCC---ceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999997764 8888885 68888887654322 11111122211 11111 23566788899999999999
Q ss_pred HHcC
Q 013019 424 LEAH 427 (451)
Q Consensus 424 L~~~ 427 (451)
|++.
T Consensus 299 L~~~ 302 (416)
T PRK00011 299 LAER 302 (416)
T ss_pred HHhC
Confidence 9886
No 182
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.81 E-value=6.6e-18 Score=174.65 Aligned_cols=214 Identities=21% Similarity=0.227 Sum_probs=149.0
Q ss_pred CchhHHHHHH----HHHhhhCCCcE-EEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHH-HhhhcCCcEEEEe-
Q 013019 208 GNPTTVVVEE----KMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIE-TVLPKMGITATVI- 280 (451)
Q Consensus 208 ~npt~~~Lee----~LA~l~gae~~-vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~-~~l~~~Gi~v~~v- 280 (451)
+++....+++ .+++++|.+.. ++++||++|+..++.+++++||+|+++++.|++...... ..+...|.++..+
T Consensus 59 ~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 138 (402)
T cd00378 59 GCEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVP 138 (402)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCceeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEec
Confidence 4455555544 57788998655 555789999999999999999999999999987543211 1134456544333
Q ss_pred -C------CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-----ccccccCCC
Q 013019 281 -D------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQKALSLGA 348 (451)
Q Consensus 281 -d------~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-----~~~pl~~Ga 348 (451)
+ ..|++++++++.+.++++|++++|+|| ...|+++|.++|+++|+++|+|+++..+. ...++. ++
T Consensus 139 ~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~ 215 (402)
T cd00378 139 YGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--RPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GA 215 (402)
T ss_pred CCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--CCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CC
Confidence 2 238999999986445899999888765 56799999999999999999999964322 123344 78
Q ss_pred cEEEECCcccCCccccceeEEEEeCH-HHHHHHHHHhHhh-CCCccHHHHHH----HHHhhH-HHHHHHHHHHHHHHHHH
Q 013019 349 DLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVL-GGALNPNAAYL----IIRGMK-TLHLRVQQQNSTALRMA 421 (451)
Q Consensus 349 DiVv~S~SK~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~~-G~~ls~~~a~l----~lrgL~-tl~~Rl~~~~~nA~~La 421 (451)
|+++.|++|+++|+. +|++++++ +++++++...... ........... +...++ .+..+++++.++++.+.
T Consensus 216 dv~~~s~sK~l~G~~---gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 292 (402)
T cd00378 216 DVVTTTTHKTLRGPR---GGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALA 292 (402)
T ss_pred cEEEeccccCCCCCC---ceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 999999999997764 78888876 8888887654321 11111111111 112222 44566788889999999
Q ss_pred HHHHcC
Q 013019 422 EILEAH 427 (451)
Q Consensus 422 e~L~~~ 427 (451)
+.|.++
T Consensus 293 ~~L~~~ 298 (402)
T cd00378 293 EALKER 298 (402)
T ss_pred HHHHhC
Confidence 999887
No 183
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.81 E-value=4.2e-18 Score=176.80 Aligned_cols=218 Identities=17% Similarity=0.238 Sum_probs=152.8
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc----cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all----~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
...+.+++.|++++|.+ +.+++++|++++..++.++. ++||+|+++.+.|.+....+. .++..|+++.+++.
T Consensus 47 ~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~-~~~~~g~~v~~v~~~ 125 (402)
T TIGR02006 47 EAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCR-YLEREGFEVTYLPPK 125 (402)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHH-HHHhcCCEEEEEccC
Confidence 45677899999999963 45555566689888876653 689999999999988665543 34556888888754
Q ss_pred ----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECCcc
Q 013019 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 357 (451)
Q Consensus 283 ----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~SK 357 (451)
.|+++|+++++++ +++|++++++||||.+.|+++|.++|+++|+++++|++++.+.. .+..+.|+|+++.|++|
T Consensus 126 ~~~~~d~~~l~~~l~~~-~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K 204 (402)
T TIGR02006 126 SNGLIDLEELKAAIRDD-TILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHK 204 (402)
T ss_pred CCCcCCHHHHHHhcCCC-CEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhh
Confidence 3799999999875 89999999999999999999999999999999999999876532 23335689999999999
Q ss_pred cCCccccceeEEEEeCHHHHHHHHHHhH-------hhCCCccHHHHHHHHHhhHH----HHHHHHHHHHHHHHHHHHHHc
Q 013019 358 FIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAEILEA 426 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~~eli~~lr~~~~-------~~G~~ls~~~a~l~lrgL~t----l~~Rl~~~~~nA~~Lae~L~~ 426 (451)
+++++| .|+++.+++...++..... ...++.+......+...++. +..+.++..+.+..+.+.|++
T Consensus 205 ~~gp~G---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~ 281 (402)
T TIGR02006 205 IYGPKG---IGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKS 281 (402)
T ss_pred hcCCCc---eEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 887555 5666655443322221110 11122222222222233333 334445566677778888888
Q ss_pred CCCeEE
Q 013019 427 HPKVLL 432 (451)
Q Consensus 427 ~p~V~~ 432 (451)
.|+|..
T Consensus 282 ~~~v~~ 287 (402)
T TIGR02006 282 IEEVYL 287 (402)
T ss_pred CCCEEE
Confidence 887743
No 184
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.80 E-value=2.9e-18 Score=176.38 Aligned_cols=221 Identities=19% Similarity=0.265 Sum_probs=148.5
Q ss_pred CCchhHHHHHHHHHhhh---CC---CcEEEeCCHHHHHHHHHHHHc-----cC-CCeEEEcCCCCcchHHHHHHhhhcCC
Q 013019 207 YGNPTTVVVEEKMSALE---GA---ESTVIMASGMSASTVMLLALV-----PA-GGHIVTTTDCYRKTRIFIETVLPKMG 274 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~---ga---e~~vv~sSG~aAi~~al~all-----~~-GD~VIv~~~~Y~~t~~~l~~~l~~~G 274 (451)
|+.+....|++.++++. ++ ++.++++++++++..++.++. ++ ||+|+++...|++..... ..++..|
T Consensus 36 ~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~-~~~~~~G 114 (382)
T TIGR03403 36 FGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATC-AFLESLG 114 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHH-HHHHHCC
Confidence 34455555666555544 43 344445555689998888763 45 478999998888766554 3456789
Q ss_pred cEEEEeCCC-----CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC-CccccccCCC
Q 013019 275 ITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGA 348 (451)
Q Consensus 275 i~v~~vd~~-----D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~Ga 348 (451)
+++.+++.. |+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+++++|++++.+ ...+..++|+
T Consensus 115 ~~v~~v~~~~~g~~d~~~l~~~i~~~-t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~ 193 (382)
T TIGR03403 115 VEVTYLPINEQGTITAEQVREAITEK-TALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGV 193 (382)
T ss_pred CEEEEEecCCCCCCCHHHHHHhcccC-CeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccccCC
Confidence 998887642 789999999874 899999999999999999999999999999999999997755 3334446789
Q ss_pred cEEEECCcccCCccccceeEEEEeCHHHH-HH-HHH---HhHhhCCCccHHHHHHHHHhhHH----HHHHHHHHHHHHHH
Q 013019 349 DLVLHSATKFIGGHNDVLAGSISGSGKLV-TQ-IRN---LHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALR 419 (451)
Q Consensus 349 DiVv~S~SK~l~G~gdv~gG~Iv~~~eli-~~-lr~---~~~~~G~~ls~~~a~l~lrgL~t----l~~Rl~~~~~nA~~ 419 (451)
|+++.|++|+++++| .|+++.++++. .. +.. ......++++....+.+..+++. ++...++..+.+++
T Consensus 194 D~~~~s~~K~~gp~G---~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~ 270 (382)
T TIGR03403 194 DFLSFSAHKFHGPKG---VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDR 270 (382)
T ss_pred CEEEEcchhhCCCCc---eEEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 999999999987766 56666554321 00 000 00000122333332222233322 33344556667778
Q ss_pred HHHHHHcCCCeEE
Q 013019 420 MAEILEAHPKVLL 432 (451)
Q Consensus 420 Lae~L~~~p~V~~ 432 (451)
+.+.|++.|+++.
T Consensus 271 l~~~L~~~~~~~~ 283 (382)
T TIGR03403 271 LEDALLELPDVFV 283 (382)
T ss_pred HHHHHhcCCCEEE
Confidence 8888888888744
No 185
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.80 E-value=5.2e-18 Score=179.50 Aligned_cols=215 Identities=22% Similarity=0.222 Sum_probs=155.5
Q ss_pred cccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 203 EYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 203 ~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
.|+ +++...+||++++++++.++++++.+|++|+..++.+++++|| |+++++.|..+...+ ...|.++.+++.
T Consensus 73 ~Y~--~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i----~~~G~~~v~v~~ 145 (460)
T PRK13238 73 AYA--GSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHI----ELNGATAVDLVI 145 (460)
T ss_pred ccC--CCCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHH----HHcCCEEEEEec
Confidence 455 5677889999999999999999999999999999999999999 999998887665433 335655554432
Q ss_pred ---------------CCHHHHHHhhcC---CCeEEEEEeCCCCCcc-cccc---HHHHHHHHHhcCCEEEEecCCCC---
Q 013019 283 ---------------ADMEGLEAALNN---NNVSLFFTESPTNPFL-RCVD---VKLVSDLCHKKGAIVCIDGTFAT--- 337 (451)
Q Consensus 283 ---------------~D~d~Le~ai~~---~~tklV~lesPsNPtG-~v~D---L~~IaelA~~~g~~lVVD~tfa~--- 337 (451)
.|+++|++++++ .+|++|++++|+||+| .+.+ +++|.++|++||++||+|+++..
T Consensus 146 ~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a 225 (460)
T PRK13238 146 DEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENA 225 (460)
T ss_pred cccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhh
Confidence 578999999974 2599999999999998 6664 67999999999999999997521
Q ss_pred --------CCccccc-------cCCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHh-----hCCCccHHHH
Q 013019 338 --------PLNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHV-----LGGALNPNAA 396 (451)
Q Consensus 338 --------~~~~~pl-------~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~-----~G~~ls~~~a 396 (451)
++....+ .-.+|+++.|..|.+.++ .||+++++ ++++++++..... .-+.++....
T Consensus 226 ~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~---~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~ 302 (460)
T PRK13238 226 YFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVN---IGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDM 302 (460)
T ss_pred hhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCc---ceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHH
Confidence 1111111 123799999999987766 38999988 5788888766321 1122334434
Q ss_pred HHHHHhhHHH--HHHHHHHHHHHHHHHHHHHcC
Q 013019 397 YLIIRGMKTL--HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 397 ~l~lrgL~tl--~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
..+..+|+.. ...++...++++.|++.|.+.
T Consensus 303 ~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~ 335 (460)
T PRK13238 303 EALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA 335 (460)
T ss_pred HHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC
Confidence 4444444431 233445555678899999875
No 186
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=3.2e-18 Score=173.84 Aligned_cols=208 Identities=15% Similarity=0.172 Sum_probs=148.0
Q ss_pred ccCCCchhHHHHHHHHHhhhC---C-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEE
Q 013019 204 YGRYGNPTTVVVEEKMSALEG---A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~g---a-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~ 278 (451)
+++|+.+....|++++++.++ . ++.|++++|+ +++..++.++ |+|++++|+|.... ..++..|.++.
T Consensus 50 ~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~----~~~~~~g~~~~ 121 (335)
T PRK14808 50 LRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYR----IFAKAVGAKFL 121 (335)
T ss_pred hhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh----CcEEECCCCHHHHH----HHHHHcCCeEE
Confidence 566677778899999999987 2 4456666666 8998888776 78999999998755 34456688877
Q ss_pred EeCCCC---HHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc--c-cc-CCCcEE
Q 013019 279 VIDPAD---MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--A-LS-LGADLV 351 (451)
Q Consensus 279 ~vd~~D---~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~--p-l~-~GaDiV 351 (451)
.++..+ ++.. .+. ++++|++++|+||||.+.+.+++.+++ +++++||+||+|....... + +. ...-++
T Consensus 122 ~v~~~~~~~~~~~--~~~--~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~ 196 (335)
T PRK14808 122 EVPLTKDLRIPEV--NVG--EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAV 196 (335)
T ss_pred EecCCCcCCCChh--Hcc--CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEE
Confidence 765421 1111 232 368999999999999999999999998 5799999999986532111 1 11 123588
Q ss_pred EECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 352 v~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~---lrgL~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+.|+||.++.+| ++.||++++++++++++..+..++ .+.....++ +...+.+..++++..++.+.+.+.|+++
T Consensus 197 ~~S~SK~~~l~G-lRvG~~v~~~~~~~~l~~~~~~~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 272 (335)
T PRK14808 197 IRTFSKAFSLAA-QRIGYVVSSEKFIDAYNRVRLPFN--VSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM 272 (335)
T ss_pred EEechhhccCcc-cceEEEEeCHHHHHHHHHhcCCCC--CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 899999999666 678999999999999887664433 333333333 3333444555566667777888888876
No 187
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.80 E-value=9.6e-18 Score=173.70 Aligned_cols=211 Identities=16% Similarity=0.184 Sum_probs=147.1
Q ss_pred hhHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 210 PTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 210 pt~~~Lee~LA~l~g--------ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
.....|++.++++++ .++.++++++++++..++.+++++||.|++++|+|..... .++..|+++..++
T Consensus 73 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~----~~~~~g~~v~~v~ 148 (394)
T PRK06836 73 AGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRF----YVDNHGGKLVVVP 148 (394)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHH----HHHHcCCEEEEEe
Confidence 445567777777653 2445555566699999999999999999999999998553 3456788887775
Q ss_pred C------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHh------cCCEEEEecCCCCCCcc--c--
Q 013019 282 P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK------KGAIVCIDGTFATPLNQ--K-- 342 (451)
Q Consensus 282 ~------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~------~g~~lVVD~tfa~~~~~--~-- 342 (451)
. .|++++++++++ ++++|++++|+||||.+.+ +++|+++|++ ||+++|+|++|...... .
T Consensus 149 ~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~ 227 (394)
T PRK06836 149 TDTDTFQPDLDALEAAITP-KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVP 227 (394)
T ss_pred cCCccCcCCHHHHHhhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCC
Confidence 3 368999999977 4999999999999999987 6677888888 89999999998643211 0
Q ss_pred c-c-cCCCcEEEECCcccCCccccceeEEEEeCHHHHHH------HHHHhHhhC-CCccHHHHHHHHHhhHHHHHHHHHH
Q 013019 343 A-L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ------IRNLHHVLG-GALNPNAAYLIIRGMKTLHLRVQQQ 413 (451)
Q Consensus 343 p-l-~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~------lr~~~~~~G-~~ls~~~a~l~lrgL~tl~~Rl~~~ 413 (451)
. . .....+++.|+||.++.+| ++.|++++++++.+. +.......+ ...+......+.+.++.- .+.++.
T Consensus 228 ~~~~~~~~~i~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~ 305 (394)
T PRK06836 228 YIFKYYDNSIVVYSFSKSLSLPG-ERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT-VDVSIY 305 (394)
T ss_pred ChHHccCcEEEEecchhhccCcc-eeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-HHHHHH
Confidence 0 1 1234689999999998776 578999988765432 111122222 234454444444444332 233455
Q ss_pred HHHHHHHHHHHHcC
Q 013019 414 NSTALRMAEILEAH 427 (451)
Q Consensus 414 ~~nA~~Lae~L~~~ 427 (451)
.++...+.+.|+++
T Consensus 306 ~~~r~~l~~~L~~~ 319 (394)
T PRK06836 306 KRNRDLLYDGLTEL 319 (394)
T ss_pred HHHHHHHHHHHHhC
Confidence 66677788888876
No 188
>PRK06855 aminotransferase; Validated
Probab=99.80 E-value=1.7e-17 Score=174.25 Aligned_cols=213 Identities=15% Similarity=0.167 Sum_probs=137.5
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC--
Q 013019 212 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-- 281 (451)
Q Consensus 212 ~~~Lee~LA~l~----ga----e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd-- 281 (451)
...|++.+++++ |. ++.++++++++|+..++. ++.+||.|++++|+|.... ... ....|+.+..++
T Consensus 75 ~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~-~~~--~~~~g~~~v~v~~~ 150 (433)
T PRK06855 75 VLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHS-SAE--AAHAGYPPVTYRLD 150 (433)
T ss_pred CHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHH-HHH--HHhcCCeEEEEecc
Confidence 345666666654 42 344444444589888874 8899999999999998733 221 112354443332
Q ss_pred -----CCCHHHHHHhhcC-CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc----cc-cC-
Q 013019 282 -----PADMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL-SL- 346 (451)
Q Consensus 282 -----~~D~d~Le~ai~~-~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~----pl-~~- 346 (451)
..|+++|+++++. .+++++++++|+||||.+++ +++|+++|+++|++||+|++|....... ++ .+
T Consensus 151 ~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~ 230 (433)
T PRK06855 151 PENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVI 230 (433)
T ss_pred cccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHc
Confidence 1378999999863 24799999999999999987 5678888999999999999987542211 11 11
Q ss_pred --CCcEEEECCcccCCccccceeEEEEeC-----HH---HHHHHHHHhHhhCCCccHHHHHHHHHhhH------HHHHHH
Q 013019 347 --GADLVLHSATKFIGGHNDVLAGSISGS-----GK---LVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRV 410 (451)
Q Consensus 347 --GaDiVv~S~SK~l~G~gdv~gG~Iv~~-----~e---li~~lr~~~~~~G~~ls~~~a~l~lrgL~------tl~~Rl 410 (451)
+-.|++.|+||.++.+| .+.||++++ ++ +++++...... ....+.+.++.+.+.++ .+....
T Consensus 231 ~~~~~I~~~S~SK~~~~pG-lRiG~ii~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~ 308 (433)
T PRK06855 231 GDVPGIALKGISKELPWPG-SRCGWIEVYNADKDEVFKKYINSILNAKMI-EVCSTTLPQMAIPRIMSHPEYKNYLKERN 308 (433)
T ss_pred CcCCeEEEecCccccCCCc-ceEEEEEEeCCchhhHHHHHHHHHHHhhcc-ccCCChHHHHHHHHhhcCCcHHHHHHHHH
Confidence 23488999999998776 578898862 22 23333332221 22334555554444442 233445
Q ss_pred HHHHHHHHHHHHHHHcCCCe
Q 013019 411 QQQNSTALRMAEILEAHPKV 430 (451)
Q Consensus 411 ~~~~~nA~~Lae~L~~~p~V 430 (451)
+...++.+.+.+.|++++++
T Consensus 309 ~~~~~r~~~~~~~L~~~~~~ 328 (433)
T PRK06855 309 KRYEKRSNIAYEKLKDVPGL 328 (433)
T ss_pred HHHHHHHHHHHHHHhcCCCe
Confidence 55667777888889877654
No 189
>PRK05839 hypothetical protein; Provisional
Probab=99.80 E-value=7.3e-18 Score=173.52 Aligned_cols=213 Identities=16% Similarity=0.119 Sum_probs=137.0
Q ss_pred cCCCchh-HHHHHHHHH----hhhC---CCcEEEeCCHH-HHHHHHHHHHc--cCCCeEEEcCCCCcchHHHHHHhhhcC
Q 013019 205 GRYGNPT-TVVVEEKMS----ALEG---AESTVIMASGM-SASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKM 273 (451)
Q Consensus 205 ~R~~npt-~~~Lee~LA----~l~g---ae~~vv~sSG~-aAi~~al~all--~~GD~VIv~~~~Y~~t~~~l~~~l~~~ 273 (451)
.+|+.+. ...|++.++ +.+| ..+.|++++|+ +++..++.+++ ++||.|+++.|.|...... +...
T Consensus 54 ~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~----~~~~ 129 (374)
T PRK05839 54 NKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGA----AIAS 129 (374)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHH----HHhc
Confidence 3444432 245555554 4445 24556666666 78888777764 5799999999999876543 4566
Q ss_pred CcEEEEeCCC-----CHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc---
Q 013019 274 GITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK--- 342 (451)
Q Consensus 274 Gi~v~~vd~~-----D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~--- 342 (451)
|+++..++.. +++..+..+ + ++++|++++|+||||.+++ +++|+++|+++|++||+||+|.......
T Consensus 130 g~~v~~v~~~~~~~~~~d~~~~~~-~-~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~ 207 (374)
T PRK05839 130 RAKVLLMPLTKENDFTPSLNEKEL-Q-EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPP 207 (374)
T ss_pred CCEEEEeecccccCCcCCcchhhh-c-cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCC
Confidence 8887776532 122222223 3 4899999999999999986 5677888899999999999987532111
Q ss_pred c-c---------cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHH
Q 013019 343 A-L---------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLR 409 (451)
Q Consensus 343 p-l---------~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~R 409 (451)
. . ..+.-+++.|+||.++.+| ++.||++++++++++++......+...+......+...+ +.+...
T Consensus 208 s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G-lRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 286 (374)
T PRK05839 208 SLLEASILVGNESFKNVLVINSISKRSSAPG-LRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEFF 286 (374)
T ss_pred CHhhhhcccCccccCcEEEEeccccccCCcc-ceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHHH
Confidence 1 1 1123488999999988776 689999999999999887765554444444333322222 223333
Q ss_pred HHHHHHHHHHHHHHH
Q 013019 410 VQQQNSTALRMAEIL 424 (451)
Q Consensus 410 l~~~~~nA~~Lae~L 424 (451)
.++..++.+.+.+.|
T Consensus 287 ~~~~~~~~~~~~~~l 301 (374)
T PRK05839 287 RNIYAKNLKLAREIL 301 (374)
T ss_pred HHHHHHHHHHHHHhc
Confidence 344444444455544
No 190
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.79 E-value=9.8e-18 Score=174.35 Aligned_cols=169 Identities=15% Similarity=0.177 Sum_probs=137.2
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 210 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae---~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
...+++++.+++++|.+ ..++.++|++++..++..++++||+|++.++.|.+.. +...+++.|++++.++.
T Consensus 42 ~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~~ 119 (401)
T PLN02409 42 ALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWGQ 119 (401)
T ss_pred HHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCCC
Confidence 45677889999999863 3566678889999999899999999999998886543 23456777888887753
Q ss_pred -CCHHHHHHhhcC---CCeEEEEEeCCCCCccccccHHHHHHH--HHhcCCEEEEecCCCCCC-ccccccCCCcEEEECC
Q 013019 283 -ADMEGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDL--CHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSA 355 (451)
Q Consensus 283 -~D~d~Le~ai~~---~~tklV~lesPsNPtG~v~DL~~Iael--A~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S~ 355 (451)
.|+++|++++++ +++++|++.++.||||.+.|+++|.++ |+++|+++|+|++++.+. ..+..++|+|+++.|.
T Consensus 120 ~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~ 199 (401)
T PLN02409 120 GADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTGS 199 (401)
T ss_pred CCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEcC
Confidence 368999999975 258999999999999999999999999 999999999999987542 2233457899999999
Q ss_pred cccCCccccceeEEEEeCHHHHHHHHH
Q 013019 356 TKFIGGHNDVLAGSISGSGKLVTQIRN 382 (451)
Q Consensus 356 SK~l~G~gdv~gG~Iv~~~eli~~lr~ 382 (451)
+|+++++. ..|+++.+++++++++.
T Consensus 200 ~K~l~~P~--G~G~l~~~~~~~~~~~~ 224 (401)
T PLN02409 200 QKALSLPT--GLGIVCASPKALEASKT 224 (401)
T ss_pred ccccCcCC--CcceeEECHHHHHHHhc
Confidence 99998764 48999999988887754
No 191
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.79 E-value=9.1e-18 Score=170.80 Aligned_cols=217 Identities=16% Similarity=0.156 Sum_probs=151.8
Q ss_pred hhHHHHHHHHHhhhCCC-cEEEeCC-HHHHHHHHHHHHcc----CC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 210 PTTVVVEEKMSALEGAE-STVIMAS-GMSASTVMLLALVP----AG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae-~~vv~sS-G~aAi~~al~all~----~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
...++++++|++++|.+ +.+++++ +++++..++.++.. +| ++|++....|++....+. .++..|+++..++.
T Consensus 42 ~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~-~~~~~G~~v~~v~~ 120 (353)
T TIGR03235 42 KAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIR-ALERNGFTVTYLPV 120 (353)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHH-HHHhcCCEEEEEcc
Confidence 34578999999999973 3455554 56899888887763 56 789998888887665543 34566888888763
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECCc
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~S 356 (451)
.|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+++++|++++.+.. .+..+.++|+++.|++
T Consensus 121 ~~~~~~d~~~l~~~l~~~-~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~ 199 (353)
T TIGR03235 121 DESGRIDVDELADAIRPD-TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGH 199 (353)
T ss_pred CCCCcCCHHHHHHhCCCC-CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehh
Confidence 4789999999874 89999999999999999999999999999999999999765532 2223468999999999
Q ss_pred ccCCccccceeEEEEeCHHHHHH--HHHHh-------HhhCCCccHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHH
Q 013019 357 KFIGGHNDVLAGSISGSGKLVTQ--IRNLH-------HVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAEI 423 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~~eli~~--lr~~~-------~~~G~~ls~~~a~l~lrgL~----tl~~Rl~~~~~nA~~Lae~ 423 (451)
|+++.+| .|+++.+++.+.. ++... ....++.+....+.+..+++ .++.+.+++.+.+..+.+.
T Consensus 200 K~~gp~g---~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~ 276 (353)
T TIGR03235 200 KIYGPKG---IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDA 276 (353)
T ss_pred hcCCCCc---eEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9976554 6888777764322 11100 01112222222222222232 3345566777778888888
Q ss_pred HHcCCCeEE
Q 013019 424 LEAHPKVLL 432 (451)
Q Consensus 424 L~~~p~V~~ 432 (451)
|++ ++++.
T Consensus 277 l~~-~g~~~ 284 (353)
T TIGR03235 277 LQT-LGVKL 284 (353)
T ss_pred hcc-CCeEE
Confidence 876 67644
No 192
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.79 E-value=7.3e-18 Score=175.42 Aligned_cols=214 Identities=13% Similarity=0.126 Sum_probs=136.6
Q ss_pred CchhHHHHHHHHHhhh----C--C-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE---
Q 013019 208 GNPTTVVVEEKMSALE----G--A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--- 276 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~----g--a-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~--- 276 (451)
+.+....|+++|++++ | . ++.|++++|+ +++..+ ..++.+||+|++++|+|......+ ...|.+
T Consensus 74 ~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l-~~~~~~gd~V~v~~P~Y~~~~~~~----~~~g~~~~~ 148 (409)
T PRK07590 74 PEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNI-LDIFGPDNTIAVTDPVYPVYVDTN----VMAGRTGEA 148 (409)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHH----HHcCCcccc
Confidence 3445567888888764 2 2 3456666666 777764 567789999999999999866443 334443
Q ss_pred --------EEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----
Q 013019 277 --------ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (451)
Q Consensus 277 --------v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~---- 341 (451)
+..++...-+.+...+...++++|++++|+||||.+++ +++|+++|+++|++||+||+|......
T Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~ 228 (409)
T PRK07590 149 NEDGRYSGIVYLPCTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLP 228 (409)
T ss_pred cccccccceeEeecccccCCcccCcccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCC
Confidence 44444321111211222235899999999999999986 567888899999999999998753211
Q ss_pred ccc-cC----CCcEEEECCcccCCccccceeEEEEeCHHHHHHH------------HHHhHhhCCCccHHHHHHHHHh--
Q 013019 342 KAL-SL----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI------------RNLHHVLGGALNPNAAYLIIRG-- 402 (451)
Q Consensus 342 ~pl-~~----GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~l------------r~~~~~~G~~ls~~~a~l~lrg-- 402 (451)
.++ .+ ...|++.|+||.++.+| ++.||+++++++++++ ..........++...+.++...
T Consensus 229 ~~~~~~~~~~~~vi~~~SfSK~~~~pG-lRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~ 307 (409)
T PRK07590 229 HSIYEIEGARECAIEFRSFSKTAGFTG-TRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYS 307 (409)
T ss_pred cchhhCCCcccceEEEecCccccCCcC-ceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhc
Confidence 111 11 12477899999998676 6789999999888732 1111111122344443333222
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 403 ---MKTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 403 ---L~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
.+.+....+...++.+.+.+.|+++
T Consensus 308 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 335 (409)
T PRK07590 308 PEGKAQIKELIDYYMENAKIIREGLESA 335 (409)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2334444555667778888999876
No 193
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.79 E-value=8.1e-18 Score=173.25 Aligned_cols=210 Identities=23% Similarity=0.282 Sum_probs=168.9
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~L 288 (451)
.+...+||++||+++|.+.+++|+||-.|+..++.+++++||.|+.+...|.+...- .+..+.++..+...|+++|
T Consensus 83 ~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG----~rls~a~~~~f~HnD~~~L 158 (388)
T COG0156 83 SDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDG----IRLSRAEVRRFKHNDLDHL 158 (388)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHH----HHhCCCcEEEecCCCHHHH
Confidence 477889999999999999999999999999999999999999999999888875533 3445677777888999999
Q ss_pred HHhhcCC-----CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcccc---c--cCC-----CcEEEE
Q 013019 289 EAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---L--SLG-----ADLVLH 353 (451)
Q Consensus 289 e~ai~~~-----~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~p---l--~~G-----aDiVv~ 353 (451)
|+.+++. +.++|++|+.-+..|.+.||++|.+++++||++++|||+++.++...- + ..| .||++.
T Consensus 159 e~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~g 238 (388)
T COG0156 159 EALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVG 238 (388)
T ss_pred HHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEE
Confidence 9999761 258999999999999999999999999999999999999887654321 0 112 379999
Q ss_pred CCcccCCccccceeEEEEeCHHHHHHHHHHhH--hhCCCccHHHHHHHHHhhHH---HHHHHHHHHHHHHHHHHHHHc
Q 013019 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEILEA 426 (451)
Q Consensus 354 S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--~~G~~ls~~~a~l~lrgL~t---l~~Rl~~~~~nA~~Lae~L~~ 426 (451)
|++|.+|.. ||++.++..+++.++...+ .+...++|..+..+...++. ...|.++..++...+.+.++.
T Consensus 239 TlsKAlGs~----Gg~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~ 312 (388)
T COG0156 239 TLGKALGSS----GGYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKA 312 (388)
T ss_pred Echhhhccc----CceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Confidence 999999965 7999999999999887533 35667888876555544444 456677777777777654443
No 194
>PRK08354 putative aminotransferase; Provisional
Probab=99.79 E-value=1.1e-17 Score=167.92 Aligned_cols=163 Identities=19% Similarity=0.239 Sum_probs=121.9
Q ss_pred hHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHH
Q 013019 211 TTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLE 289 (451)
Q Consensus 211 t~~~Lee~LA~l~gae~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le 289 (451)
....|++++++++|. + +++++|+ +++..++. ++.+||+|++++|+|..... .++..|.++..+. .|++.++
T Consensus 41 ~~~~l~~~ia~~~~~-~-I~vt~G~~~al~~~~~-~~~~gd~vlv~~P~y~~~~~----~~~~~g~~~~~~~-~d~~~l~ 112 (311)
T PRK08354 41 YYEWLEEEFSKLFGE-P-IVITAGITEALYLIGI-LALRDRKVIIPRHTYGEYER----VARFFAARIIKGP-NDPEKLE 112 (311)
T ss_pred ChHHHHHHHHHHHCC-C-EEECCCHHHHHHHHHH-hhCCCCeEEEeCCCcHHHHH----HHHHcCCEEeecC-CCHHHHH
Confidence 356799999999984 4 5555555 88887764 44589999999999998653 4456788776553 5789999
Q ss_pred HhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-ccccCCCcEEEECCcccCCccccc
Q 013019 290 AALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSATKFIGGHNDV 365 (451)
Q Consensus 290 ~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~-~pl~~GaDiVv~S~SK~l~G~gdv 365 (451)
+++++ ++++++++|+||||.+.+ +++|.++|+++|+++|+||+|...... ........+++.|+||.++.+| +
T Consensus 113 ~~~~~--~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~G-l 189 (311)
T PRK08354 113 ELVER--NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPG-I 189 (311)
T ss_pred HhhcC--CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCcc-c
Confidence 88863 678999999999999986 566777888999999999998764321 1122334689999999998776 5
Q ss_pred eeEEEEeCHHHHHHHHHHhHhh
Q 013019 366 LAGSISGSGKLVTQIRNLHHVL 387 (451)
Q Consensus 366 ~gG~Iv~~~eli~~lr~~~~~~ 387 (451)
+.||+++ +.+.++..+..+
T Consensus 190 RiG~~v~---~~~~l~~~~~~~ 208 (311)
T PRK08354 190 RVGYVKG---FEEAFRSVRMPW 208 (311)
T ss_pred eeeeeee---hHHHHHHcCCCc
Confidence 7889888 555666554433
No 195
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.79 E-value=1.7e-17 Score=172.39 Aligned_cols=212 Identities=17% Similarity=0.146 Sum_probs=140.4
Q ss_pred hHHHHHHHHHhhhC-------CCcEEE---eCCHHHHHHHHHH---HHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEE
Q 013019 211 TTVVVEEKMSALEG-------AESTVI---MASGMSASTVMLL---ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (451)
Q Consensus 211 t~~~Lee~LA~l~g-------ae~~vv---~sSG~aAi~~al~---all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v 277 (451)
...+|++.+++++. .++.++ +.+|++|+..+++ +++++||+|++++|+|..... .++..|.++
T Consensus 73 G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~----~~~~~G~~~ 148 (404)
T PTZ00376 73 GLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN----IFKSAGLNV 148 (404)
T ss_pred CCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCce
Confidence 35578888887642 122344 4445577766653 678999999999999998664 345567766
Q ss_pred EEeCC-------CCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc---
Q 013019 278 TVIDP-------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK--- 342 (451)
Q Consensus 278 ~~vd~-------~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~--- 342 (451)
..++. .|++.++++++. .+++++++++|+||||.+++ +++|+++|++||+++|+|++|.......
T Consensus 149 ~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~ 228 (404)
T PTZ00376 149 KEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDK 228 (404)
T ss_pred eeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHH
Confidence 66543 268899888852 23678888999999999986 6678888999999999999987543211
Q ss_pred ---cc----cCC-CcEEEECCcccCCccccceeEEE---EeCHHHHHHHH----HHhHhhCCCccHHHHHHHHHhhHH--
Q 013019 343 ---AL----SLG-ADLVLHSATKFIGGHNDVLAGSI---SGSGKLVTQIR----NLHHVLGGALNPNAAYLIIRGMKT-- 405 (451)
Q Consensus 343 ---pl----~~G-aDiVv~S~SK~l~G~gdv~gG~I---v~~~eli~~lr----~~~~~~G~~ls~~~a~l~lrgL~t-- 405 (451)
++ ..+ .-+++.|+||.++.+| .+.||+ ++++++++++. ........+.+...+..+...++.
T Consensus 229 ~~~~~~~~~~~~~~vi~i~SfSK~~~~~G-lRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 307 (404)
T PTZ00376 229 DAYAIRLFAERGVEFLVAQSFSKNMGLYG-ERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPE 307 (404)
T ss_pred HHHHHHHHHhcCCcEEEEEeCCCcccccc-cccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHH
Confidence 11 111 3488999999999776 567887 57877665543 222222233344544444433321
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHcC
Q 013019 406 --------LHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 406 --------l~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+....++..++...+.+.|+++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 337 (404)
T PTZ00376 308 LRAEWLSELKEMSGRIQNMRQLLYDELKAL 337 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2222345567778888888876
No 196
>PLN02231 alanine transaminase
Probab=99.79 E-value=3.6e-17 Score=176.04 Aligned_cols=215 Identities=16% Similarity=0.190 Sum_probs=143.2
Q ss_pred HHHHHHHHHhhh----CC---CcEEEeCCH-HHHHHHHHHHHcc-CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-
Q 013019 212 TVVVEEKMSALE----GA---ESTVIMASG-MSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (451)
Q Consensus 212 ~~~Lee~LA~l~----ga---e~~vv~sSG-~aAi~~al~all~-~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd- 281 (451)
...|++.|++++ |. .+.|++++| ++|+..++.+++. +||.|+++.|.|......+ ...|.++..++
T Consensus 170 ~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~----~~~g~~~v~~~l 245 (534)
T PLN02231 170 IKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASI----ALHGGTLVPYYL 245 (534)
T ss_pred cHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHH----HHcCCEEEEEec
Confidence 455666666654 42 234555555 5999999999984 7999999999998765433 44565555442
Q ss_pred ------CCCHHHHHHhhcCC-----CeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc--c---
Q 013019 282 ------PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--K--- 342 (451)
Q Consensus 282 ------~~D~d~Le~ai~~~-----~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~--~--- 342 (451)
..|+++|++++++. ++|+|++.+|+||||.+++ +++|+++|+++|++||+||+|...... .
T Consensus 246 ~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~ 325 (534)
T PLN02231 246 DEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFH 325 (534)
T ss_pred CcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcc
Confidence 24789999988641 4899999999999999985 678899999999999999998754321 1
Q ss_pred cc-c----CC------CcEEEECCcccC-CccccceeEEEEe---CHHHHHHHHHHhHhhCCCccHHHHHHHHHhh----
Q 013019 343 AL-S----LG------ADLVLHSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---- 403 (451)
Q Consensus 343 pl-~----~G------aDiVv~S~SK~l-~G~gdv~gG~Iv~---~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---- 403 (451)
++ . .| .-++++|+||.+ +.+| .++||+++ ++++++++.+.... ..+.+.....++...+
T Consensus 326 s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pG-lRiGy~~~~~~~~~l~~~l~k~~~~-~~~s~~~~Q~~~~~~l~~p~ 403 (534)
T PLN02231 326 SFKKVARSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFTSDVREQIYKVASV-NLCSNISGQILASLVMSPPK 403 (534)
T ss_pred cHHHHHhhhccccCCceEEEEeccCcccccCCc-cceEEEEEecCCHHHHHHHHHHHhh-hcCCChHHHHHHHHHhCCCC
Confidence 11 0 11 136788999976 4344 57898875 67888888766542 2222222222222222
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 013019 404 ----------KTLHLRVQQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 404 ----------~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
+......+...++++.+.+.|++++++..
T Consensus 404 ~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~ 442 (534)
T PLN02231 404 PGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTC 442 (534)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 11112245667788889999998877653
No 197
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.78 E-value=1.9e-17 Score=169.77 Aligned_cols=221 Identities=23% Similarity=0.268 Sum_probs=165.3
Q ss_pred CchhHHHHHHHHHhhhCCCc---EEEeCCHHHHHHHHHHHH---ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 208 GNPTTVVVEEKMSALEGAES---TVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~---~vv~sSG~aAi~~al~al---l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
.....+++++.+++++|++. .+++++++.++..++.++ +++||+|++....|++....+....++.|+++++++
T Consensus 41 ~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~ 120 (371)
T PF00266_consen 41 FAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIP 120 (371)
T ss_dssp HHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred hhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhhcccc
Confidence 34566788999999999744 455667778999999998 789999999999999988777777778899988775
Q ss_pred -----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEECC
Q 013019 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSA 355 (451)
Q Consensus 282 -----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S~ 355 (451)
..|++++++++++ ++++|++....|.+|...|+++|.++||++|+++++|.+++.+. ..+.-++|+|+++.|.
T Consensus 121 ~~~~~~~~~~~~~~~l~~-~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~ 199 (371)
T PF00266_consen 121 ADPGGSLDLEDLEEALNP-DTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSS 199 (371)
T ss_dssp EGTTSSCSHHHHHHHHHT-TESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEES
T ss_pred ccccchhhhhhhhhhhcc-ccceEEeecccccccEEeeeceehhhhhccCCceeEechhccccccccccccccceeeecc
Confidence 2478999999986 49999999999999999999999999999999999999987653 2344467899999999
Q ss_pred cccCCccccceeEEEEeCHHHHHHHHHHhH---------------------hhCCCccHHHHHHHHHhhHHH-----HHH
Q 013019 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HLR 409 (451)
Q Consensus 356 SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~---------------------~~G~~ls~~~a~l~lrgL~tl-----~~R 409 (451)
+|+++++| .|+++.+++++++++.... ..+++.+....+.+..+++.+ ...
T Consensus 200 ~Kl~gp~G---~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i 276 (371)
T PF00266_consen 200 HKLGGPPG---LGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERI 276 (371)
T ss_dssp TSTTSSST---EEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCc---hhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccc
Confidence 99444444 6999999988888742211 012233333333333333333 222
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEE
Q 013019 410 VQQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 410 l~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
.++..+.++.+.+.|++.|.+..
T Consensus 277 ~~~~~~l~~~~~~~l~~~~~~~~ 299 (371)
T PF00266_consen 277 RERIRELAEYLREALEELPGIEV 299 (371)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEE
T ss_pred hhhhhhHHHHHHhhhhcCCceeE
Confidence 45566778888889999988754
No 198
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.78 E-value=8.1e-18 Score=150.70 Aligned_cols=156 Identities=23% Similarity=0.271 Sum_probs=127.5
Q ss_pred HHHHHHHHHhhh--CCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCC-----
Q 013019 212 TVVVEEKMSALE--GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD----- 284 (451)
Q Consensus 212 ~~~Lee~LA~l~--gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D----- 284 (451)
.+++++.+++++ +.+.++++++|++|+..++.++.++|++|++.++.|.+... ..+...|.++..++..+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ 78 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW---VAAELAGAKPVPVPVDDAGYGG 78 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh---hHHHhcCCEEEEeccCCCCccc
Confidence 467999999999 78889999999999999999998889999999999998763 23456688887776431
Q ss_pred H--HHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc----ccccCCCcEEEECCccc
Q 013019 285 M--EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLGADLVLHSATKF 358 (451)
Q Consensus 285 ~--d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~----~pl~~GaDiVv~S~SK~ 358 (451)
. +.+++.....+++++++++++|++|...|+++|.++|+++|+++|+|+++..+... .+...++|+++.|++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s~~K~ 158 (170)
T cd01494 79 LDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKN 158 (170)
T ss_pred hhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEEcccc
Confidence 1 24544443345899999999999999999999999999999999999998765433 34556899999999999
Q ss_pred CCccccceeEEEEeC
Q 013019 359 IGGHNDVLAGSISGS 373 (451)
Q Consensus 359 l~G~gdv~gG~Iv~~ 373 (451)
+++++ +|+++.+
T Consensus 159 ~~~~~---~G~l~~~ 170 (170)
T cd01494 159 LGGEG---GGVVIVK 170 (170)
T ss_pred cCCCc---eEEEEeC
Confidence 99864 8888764
No 199
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.78 E-value=2.8e-17 Score=170.30 Aligned_cols=216 Identities=19% Similarity=0.213 Sum_probs=159.0
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc---------CC-CeEEEcCCCCcch-HHHHHH-------
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AG-GHIVTTTDCYRKT-RIFIET------- 268 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~---------~G-D~VIv~~~~Y~~t-~~~l~~------- 268 (451)
+.++...+|+++|+++.+.+.+++++||++|+..++..+.. +| ++||+.+..|.+. ...+..
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~ 159 (401)
T PRK00854 80 FRNDQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDAR 159 (401)
T ss_pred cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcccc
Confidence 45678889999999999988999999999999999987753 23 5777777666553 332210
Q ss_pred -hhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCCCccc-
Q 013019 269 -VLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQK- 342 (451)
Q Consensus 269 -~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~~~~~- 342 (451)
.+......+.+++..|+++|++++.+ ++++|++|+|+||+|.+.+ +++|.++|++||+++|+||++. ++...
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~le~~i~~-~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~g~~g 237 (401)
T PRK00854 160 GGFGPFTPGFRVVPFGDAEALEAAITP-NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GLGRTG 237 (401)
T ss_pred ccCCCCCCCeEEeCCCCHHHHHHHhCC-CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCc
Confidence 01122234566777899999999987 4999999999999999986 9999999999999999999985 22211
Q ss_pred ------cccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHH--HHHHHH
Q 013019 343 ------ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQN 414 (451)
Q Consensus 343 ------pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~--Rl~~~~ 414 (451)
......|+++. +|++++.. ..+|++++++++++.++..........++..++.++..|+.+.. ..++..
T Consensus 238 ~~~~~~~~g~~~D~~~~--~K~l~gg~-~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~ 314 (401)
T PRK00854 238 KLLAEEHEGIEADVTLI--GKALSGGF-YPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAA 314 (401)
T ss_pred hHhHHhhcCCCCCEEEe--cccccCCc-cCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 12234688875 59998753 45789999999888776432222223477888888888877654 456666
Q ss_pred HHHHHHHHHHHcC
Q 013019 415 STALRMAEILEAH 427 (451)
Q Consensus 415 ~nA~~Lae~L~~~ 427 (451)
++...+.+.|++.
T Consensus 315 ~~~~~l~~~L~~~ 327 (401)
T PRK00854 315 EMGAYFLEGLRSI 327 (401)
T ss_pred HHHHHHHHHHHhh
Confidence 7777888888765
No 200
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.78 E-value=2.1e-17 Score=171.63 Aligned_cols=214 Identities=12% Similarity=0.117 Sum_probs=136.6
Q ss_pred CchhHHHHHHHHHhhh---CC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc-------
Q 013019 208 GNPTTVVVEEKMSALE---GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI------- 275 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~---ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi------- 275 (451)
+.+....|++++++++ +. .+.|++++|+ +++..+ ..++.+||+|++++|+|......+ +..|+
T Consensus 73 p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l-~~l~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~~~~ 147 (402)
T TIGR03542 73 PEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRL-QSLFGSDNTVAVQDPVYPAYVDSN----VMAGRAGVLDDD 147 (402)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHH----HHcCCccccccc
Confidence 3455677999999865 32 3456666666 787764 567789999999999999865433 44555
Q ss_pred ----EEEEeCCCCHHHHHHhhc-CCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----cc
Q 013019 276 ----TATVIDPADMEGLEAALN-NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA 343 (451)
Q Consensus 276 ----~v~~vd~~D~d~Le~ai~-~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~p 343 (451)
++..++....+.+...+. ..++++|++++|+||||.+++ +++|.++|+++|++||+|++|...... .+
T Consensus 148 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~ 227 (402)
T TIGR03542 148 GRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHS 227 (402)
T ss_pred cccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcc
Confidence 666554321111111111 124899999999999999997 788999999999999999998753211 11
Q ss_pred c---cC--CCcEEEECCcccCCccccceeEEEEeCHHHH--------HHHHHHhHhhCCCccHHHHHHHHHhh-----HH
Q 013019 344 L---SL--GADLVLHSATKFIGGHNDVLAGSISGSGKLV--------TQIRNLHHVLGGALNPNAAYLIIRGM-----KT 405 (451)
Q Consensus 344 l---~~--GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli--------~~lr~~~~~~G~~ls~~~a~l~lrgL-----~t 405 (451)
+ +. ...+++.|+||.++.+| ++.||++++++++ +.+...........+......+...+ +.
T Consensus 228 ~~~~~~~~~~vi~~~SfSK~~g~pG-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 306 (402)
T TIGR03542 228 IFEIPGAKECAIEFRSFSKTAGFTG-VRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQP 306 (402)
T ss_pred hhhCCCCcccEEEEecCccccCCCC-cceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhH
Confidence 1 11 12477899999998777 6789999998876 22211111112234444333322222 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC
Q 013019 406 LHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 406 l~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+....+...++.+.+.+.|+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~L~~~ 328 (402)
T TIGR03542 307 ILEAISYYMENARILRKALEAA 328 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 3333455566777788888875
No 201
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.78 E-value=3.1e-17 Score=169.15 Aligned_cols=169 Identities=19% Similarity=0.246 Sum_probs=129.6
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHH-HHHHHHHHHHccC--CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC--
Q 013019 210 PTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae--~~vv~sSG~-aAi~~al~all~~--GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-- 282 (451)
+.++++++++++++|.+ ..+++++|+ ++...++.+++.+ ||+|+++++.|+.+...+.......|.++.+++.
T Consensus 64 ~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~ 143 (398)
T cd00613 64 QALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE 143 (398)
T ss_pred HHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC
Confidence 34678999999999875 666677666 4555555566666 9999999999999876665444455677777654
Q ss_pred ---CCHHHHHHhhcCCCeEEEEEeCCCCCccccccH-HHHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEEECCcc
Q 013019 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV-KLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATK 357 (451)
Q Consensus 283 ---~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL-~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv~S~SK 357 (451)
.|+++++++++++ +++|++++|+ ++|.+.|+ ++|.++|+++|+++|+|++++.+ ...++..+++|+++.|++|
T Consensus 144 ~~~~d~~~l~~~i~~~-t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K 221 (398)
T cd00613 144 GGTVDLEALKEEVSEE-VAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQK 221 (398)
T ss_pred CCCcCHHHHHHhcCCC-eEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccc
Confidence 2689999999874 9999999985 89999885 99999999999999999986543 3344556789999999999
Q ss_pred cCCcc--ccceeEEEEeCHHHHHHH
Q 013019 358 FIGGH--NDVLAGSISGSGKLVTQI 380 (451)
Q Consensus 358 ~l~G~--gdv~gG~Iv~~~eli~~l 380 (451)
++.+. |.-++|+++.++++++.+
T Consensus 222 ~~~p~g~Ggp~~g~l~~~~~~~~~~ 246 (398)
T cd00613 222 TGVPHGGGGPGAGFFAVKKELVRFL 246 (398)
T ss_pred cCCCCCCCCCceeEEEEhhhhHhhC
Confidence 98321 113478999988777654
No 202
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.78 E-value=4.1e-17 Score=174.29 Aligned_cols=209 Identities=13% Similarity=0.226 Sum_probs=136.8
Q ss_pred HHHHHHHHhhhC--------C-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 213 VVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 213 ~~Lee~LA~l~g--------a-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
..|++.||++++ . ++.|++++|. +|+..++.+++++||.|++++|.|++....+. ...|+++..++.
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~---~~~G~~vv~v~~ 173 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLR---WRTGVEIIPVPC 173 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHH---hhCCCEEEEEeC
Confidence 446666666543 1 2445555555 99999999999999999999999998654332 135777666643
Q ss_pred -------CCHHHHHHhhc-----CCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----cc
Q 013019 283 -------ADMEGLEAALN-----NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA 343 (451)
Q Consensus 283 -------~D~d~Le~ai~-----~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~p 343 (451)
.|+++++++++ ..++|+|++++|+||||.+++ +++|+++|+++|++||+||+|+..... .+
T Consensus 174 ~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~s 253 (496)
T PLN02376 174 SSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVS 253 (496)
T ss_pred CCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCccc
Confidence 35777765532 125899999999999999997 567888899999999999998753211 11
Q ss_pred ---c----cC---CCc--EEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH---HH
Q 013019 344 ---L----SL---GAD--LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LH 407 (451)
Q Consensus 344 ---l----~~---GaD--iVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t---l~ 407 (451)
+ +. ..+ +++.|+||.++.+| .+.|+++++ +.+.+.++... ..+ .++...++++...|+. +.
T Consensus 254 i~~l~~~~~~~~~~~~~v~vv~S~SK~~glpG-lRvG~li~~~~~l~~~~~~~~-~~~-~vs~~~Q~a~~~~L~d~~~~~ 330 (496)
T PLN02376 254 VAEVVNDVDISEVNVDLIHIVYSLSKDMGLPG-FRVGIVYSFNDSVVSCARKMS-SFG-LVSSQTQLMLASMLSDDQFVD 330 (496)
T ss_pred HHHhhccccccccCCCeEEEEEeccccCCCCc-ceEEEEEECCHHHHHHHHHHh-hcC-CCCHHHHHHHHHHhCChhHHH
Confidence 1 00 112 45799999998776 678999985 55555554433 233 2445554444333321 11
Q ss_pred ----HHHHHHHHHHHHHHHHHHcC
Q 013019 408 ----LRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 408 ----~Rl~~~~~nA~~Lae~L~~~ 427 (451)
...++..++.+.+.+.|+++
T Consensus 331 ~~l~~~r~~l~~r~~~l~~~L~~~ 354 (496)
T PLN02376 331 NFLMESSRRLGIRHKVFTTGIKKA 354 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC
Confidence 11334445566677778764
No 203
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.78 E-value=1.4e-18 Score=173.40 Aligned_cols=239 Identities=23% Similarity=0.298 Sum_probs=170.5
Q ss_pred CCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHH
Q 013019 186 KKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIF 265 (451)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~ 265 (451)
++.+++........+...|+ .+|+..+|++++++++|.+.++++.||+.|+.+++.+++++++.||+.++.|.....-
T Consensus 7 ~~~~m~~a~~~a~~gd~~Yg--~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ 84 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDDAYG--EDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDET 84 (290)
T ss_dssp S-HHEEHHHHHTTSB-CCTT--SSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSST
T ss_pred CCHHHHHHHHccccCCcccC--CChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeecc
Confidence 44444444433333334566 6899999999999999999999999999999999999999999999988765432211
Q ss_pred HHHhhhcCCcEEEEeCC-----CCHHHHHHhhcC-----CCeEEEEEeCCCCCc-cccc---cHHHHHHHHHhcCCEEEE
Q 013019 266 IETVLPKMGITATVIDP-----ADMEGLEAALNN-----NNVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCI 331 (451)
Q Consensus 266 l~~~l~~~Gi~v~~vd~-----~D~d~Le~ai~~-----~~tklV~lesPsNPt-G~v~---DL~~IaelA~~~g~~lVV 331 (451)
- ......|.++..+.. .++++|++++++ .++++|++|+|+|.. |.++ +|++|.++||+||+.|+.
T Consensus 85 g-a~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhm 163 (290)
T PF01212_consen 85 G-AIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHM 163 (290)
T ss_dssp T-HHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEE
T ss_pred c-hhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEE
Confidence 0 111235776665532 478999998865 358999999999864 6666 578899999999999999
Q ss_pred ecCCC---C---CCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCcc---HHHH---H--
Q 013019 332 DGTFA---T---PLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN---PNAA---Y-- 397 (451)
Q Consensus 332 D~tfa---~---~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls---~~~a---~-- 397 (451)
|.+-. . ....+.+..++|++..|++|.++.+. +++++++++++++.+.++..+|+.+. ...+ |
T Consensus 164 DGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~---Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~ 240 (290)
T PF01212_consen 164 DGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPG---GAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQF 240 (290)
T ss_dssp EETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSS---EEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHH
T ss_pred ehhhHHHhhhcccccHHHHhhhCCEEEEEEEccccccc---ceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhH
Confidence 99831 1 12223334689999999999999875 89999999988887777777765442 2222 1
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCe
Q 013019 398 LIIRGMKTLHLRVQQQNSTALRMAEILEAHPKV 430 (451)
Q Consensus 398 l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V 430 (451)
..+++++....++.+..+++++|++.|++.+.+
T Consensus 241 ~~l~~l~~~~~~~~~~~~~A~~La~~l~~~~~~ 273 (290)
T PF01212_consen 241 AALRALELWLERARHANAMAKRLAAGLEALGGV 273 (290)
T ss_dssp HHHCHEECSHHHHHCHHHHHHCHHHCHHEECEE
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 233444544567778889999999999998765
No 204
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.78 E-value=1.8e-17 Score=172.57 Aligned_cols=193 Identities=16% Similarity=0.199 Sum_probs=131.3
Q ss_pred CCCchh-HHHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHHcc-----CCCeEEE-cCCCCcchHHHHHH--
Q 013019 206 RYGNPT-TVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALVP-----AGGHIVT-TTDCYRKTRIFIET-- 268 (451)
Q Consensus 206 R~~npt-~~~Lee~LA~l~----ga---e~~vv~sSG~-aAi~~al~all~-----~GD~VIv-~~~~Y~~t~~~l~~-- 268 (451)
+|+++. ...|+++|++++ |. ++.|++++|+ +++..++.++++ +||.|++ .+|+|.+.......
T Consensus 69 ~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~ 148 (416)
T PRK09440 69 NYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEED 148 (416)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccC
Confidence 344443 356777777665 32 3456666666 899999998885 6899999 69999875542210
Q ss_pred hhhcCCcEEEEeC------CCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCC
Q 013019 269 VLPKMGITATVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL 339 (451)
Q Consensus 269 ~l~~~Gi~v~~vd------~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~ 339 (451)
.+...+..+..++ ..|+++|+ +.+ ++++|++++|+||||.+++ +++|+++|+++|++||+|++|+.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~-~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~ 225 (416)
T PRK09440 149 LFVSYRPNIELLPEGQFKYHVDFEHLH--IDE-DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPF 225 (416)
T ss_pred ceeecccccccccccccccCCCHHHcc--cCC-CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccC
Confidence 1111222222121 24677776 344 4899999999999999997 6778888999999999999997532
Q ss_pred cc----c--cccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh
Q 013019 340 NQ----K--ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM 403 (451)
Q Consensus 340 ~~----~--pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL 403 (451)
.. . +...+.-|++.|+||+ +.+| ++.||+++++++++++...+.......+.+...++...+
T Consensus 226 ~~~~~~~~~~~~~~~vI~~~SfSK~-~~pG-lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l 293 (416)
T PRK09440 226 PGIIFSEATPLWNPNIILCMSLSKL-GLPG-VRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMI 293 (416)
T ss_pred CCcchhhcCccccCCeEEEeccccc-CCCc-ceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHh
Confidence 11 1 1112334888999996 6555 789999999999999988776665556666655555444
No 205
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.78 E-value=2.5e-17 Score=172.68 Aligned_cols=214 Identities=18% Similarity=0.203 Sum_probs=154.5
Q ss_pred ccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
|+ +.+...+||+.+++++|.++++++.+|++|+..++++++++||.| ++++.|..+...+ ...|....+++.
T Consensus 49 Y~--~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i----~~~Ga~pv~v~i~ 121 (431)
T cd00617 49 YA--GSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHI----EANGAVPVDLVID 121 (431)
T ss_pred cC--CCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHH----HhCCCEeEEEecc
Confidence 54 567789999999999999999999999999999999999999987 5777777765433 234544444322
Q ss_pred --------------CCHHHHHHhhcCC---CeEEEEEeCCCCCc-ccccc---HHHHHHHHHhcCCEEEEecCCCC----
Q 013019 283 --------------ADMEGLEAALNNN---NVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT---- 337 (451)
Q Consensus 283 --------------~D~d~Le~ai~~~---~tklV~lesPsNPt-G~v~D---L~~IaelA~~~g~~lVVD~tfa~---- 337 (451)
.|+++|+++|+++ ++++|++++|+||+ |.+.+ +++|.++|++||++||.|++...
T Consensus 122 ~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~ 201 (431)
T cd00617 122 EAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAY 201 (431)
T ss_pred cccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhh
Confidence 4799999999853 38899999999998 88875 56889999999999999999321
Q ss_pred -------CCccccc-c------CCCcEEEECCcccCCccccceeEEEEeCH-HHHHHHHHHhHh-----hCCCccHHHHH
Q 013019 338 -------PLNQKAL-S------LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-----LGGALNPNAAY 397 (451)
Q Consensus 338 -------~~~~~pl-~------~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~-----~G~~ls~~~a~ 397 (451)
++...++ + -.+|.+..|+.|...++ .||++++++ +++++++..... ..+.++..+..
T Consensus 202 ~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~---~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~ 278 (431)
T cd00617 202 FIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVN---IGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDME 278 (431)
T ss_pred hhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCc---cceEEEeCcHHHHHHHHHhccccCCccccccccHHHHH
Confidence 1222221 1 14788888888887766 489999986 588888754311 12234444433
Q ss_pred HHHHhhHHH--HHHHHHHHHHHHHHHHHHHcC
Q 013019 398 LIIRGMKTL--HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 398 l~lrgL~tl--~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
.+..+|+.. ...+++..++++.|++.|++.
T Consensus 279 A~A~gL~e~~~~~~l~~~~~~r~~l~~~L~~~ 310 (431)
T cd00617 279 ALAQGLREAVEEDYLRHRVEQVRYLGDRLDEA 310 (431)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC
Confidence 333355432 344566666778899999875
No 206
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.78 E-value=4.1e-17 Score=166.76 Aligned_cols=213 Identities=17% Similarity=0.200 Sum_probs=153.8
Q ss_pred hHHHHHHHHHhhhCCC---c-EEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 211 TTVVVEEKMSALEGAE---S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 211 t~~~Lee~LA~l~gae---~-~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
..+++++.+++++|.+ . .+++++|+.++..++.++..+||+|++..+.|.+.. +...++..|+++..++.
T Consensus 38 ~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~~~~~g~~~~~i~~~~~~ 115 (368)
T PRK13479 38 LTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGAR--IAQIAEYLGIAHVVLDTGEDE 115 (368)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHH--HHHHHHHcCCcEEEEECCCCC
Confidence 5678999999999973 3 346678999999999999999999999877766543 23456677888777653
Q ss_pred -CCHHHHHHhhcCC-CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEECCcccC
Q 013019 283 -ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFI 359 (451)
Q Consensus 283 -~D~d~Le~ai~~~-~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S~SK~l 359 (451)
.|+++++++++++ ++++|++++|+||||...|+++|.++|+++|+++|+|+++..+. ..+..++++|+++.|++|++
T Consensus 116 ~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l 195 (368)
T PRK13479 116 PPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCI 195 (368)
T ss_pred CCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCcccc
Confidence 4689999988642 46789999999999999999999999999999999998754332 12223468999999999988
Q ss_pred CccccceeEEEEeCHHHHHHHHHHhHhh--------------C---CCccHHHHHHHHHhhHH------HHHHHHHHHHH
Q 013019 360 GGHNDVLAGSISGSGKLVTQIRNLHHVL--------------G---GALNPNAAYLIIRGMKT------LHLRVQQQNST 416 (451)
Q Consensus 360 ~G~gdv~gG~Iv~~~eli~~lr~~~~~~--------------G---~~ls~~~a~l~lrgL~t------l~~Rl~~~~~n 416 (451)
.|+.. .|+++.+++++++++.....+ + .+.+....+.+..+++. +..+.+++.+.
T Consensus 196 ~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~ 273 (368)
T PRK13479 196 EGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANN 273 (368)
T ss_pred ccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Confidence 65531 599999998887765422110 0 12222222222222222 34556677778
Q ss_pred HHHHHHHHHcC
Q 013019 417 ALRMAEILEAH 427 (451)
Q Consensus 417 A~~Lae~L~~~ 427 (451)
++.+.+.|+++
T Consensus 274 ~~~l~~~L~~~ 284 (368)
T PRK13479 274 QRTLVAGMRAL 284 (368)
T ss_pred HHHHHHHHHHc
Confidence 88888888876
No 207
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.77 E-value=3e-17 Score=173.25 Aligned_cols=210 Identities=15% Similarity=0.199 Sum_probs=142.8
Q ss_pred HHHHHHHHHhhhC--------C-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 212 TVVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 212 ~~~Lee~LA~l~g--------a-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
...|++.+|++++ . ++.|++++|. +|+..++.+++.+||.|+++.|.|++....+. .+.|+++..++
T Consensus 97 ~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~---~~~g~~vv~v~ 173 (447)
T PLN02607 97 LKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR---WRTGVKIVPIH 173 (447)
T ss_pred hHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH---hcCCcEEEEEe
Confidence 3457777776653 1 2345556655 89999999999999999999999998654332 13566665553
Q ss_pred C-------CCHHHHHHhhcC-----CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-----
Q 013019 282 P-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (451)
Q Consensus 282 ~-------~D~d~Le~ai~~-----~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----- 341 (451)
. .|++++++++++ .++|+|++++|+||||.+++ +++|.++|+++|+++|+||+|+.....
T Consensus 174 ~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~ 253 (447)
T PLN02607 174 CDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFV 253 (447)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcc
Confidence 2 368889888763 25899999999999999987 778889999999999999998753211
Q ss_pred cccc----C------CCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH------
Q 013019 342 KALS----L------GADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------ 404 (451)
Q Consensus 342 ~pl~----~------GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~------ 404 (451)
..+. . ..-+++.|+||.++.+| .+.|++++ ++++++.++...... .++.....++...|+
T Consensus 254 S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~G-lRvG~ivs~n~~l~~~~~~~~~~~--~~s~~~q~~~~~~L~d~~~~~ 330 (447)
T PLN02607 254 SVAEIVEARGYKGVAERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSSFT--LVSSQTQHLLASMLSDEEFTE 330 (447)
T ss_pred cHHHHHhhcCCCCCcCcEEEEEcchhcCCCCc-ceEEEEEEcCHHHHHHHHHHhhcC--CCCHHHHHHHHHHhCCchhHH
Confidence 1110 1 12378899999998777 67899998 667777766553322 223333333332222
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHcC
Q 013019 405 -TLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 405 -tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
.+....++..++.+.+.+.|+++
T Consensus 331 ~~l~~~r~~l~~~~~~~~~~L~~~ 354 (447)
T PLN02607 331 NYIRTNRERLRKRYEMIVQGLRRA 354 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 22333445566677788888875
No 208
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.77 E-value=2.3e-17 Score=169.45 Aligned_cols=215 Identities=19% Similarity=0.197 Sum_probs=149.1
Q ss_pred hHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc---cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 211 TTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 211 t~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all---~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
..+++++++++++|.+ +.+++++|++++..++.+++ ++||+|++....|++....+. .+...|+++..++.
T Consensus 43 ~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~-~~~~~G~~v~~v~~~~~ 121 (379)
T TIGR03402 43 AVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQ-HLEKQGYKVTYLPVDEE 121 (379)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHH-HHHHcCCEEEEEccCCC
Confidence 3567889999999963 45566677899998887764 457899999999987655443 34557888888753
Q ss_pred --CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECCcccC
Q 013019 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (451)
Q Consensus 283 --~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~SK~l 359 (451)
.|+++++++++++ +++|++++++||||.+.|+++|.++|+++|+++++|++++.+.. .+..++|+|+++.|.+|++
T Consensus 122 g~~~~~~l~~~i~~~-~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~ 200 (379)
T TIGR03402 122 GRLDLEELRAAITDD-TALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLH 200 (379)
T ss_pred CcCCHHHHHHhcCCC-cEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHHcC
Confidence 4789999999874 99999999999999999999999999999999999999876532 2333578999999999966
Q ss_pred CccccceeEEEEeCHHHHHHHHHHh-------HhhCCCccHHHHHHHHHhhHH----HHHHHHHHHHHHHHHHHHHHc-C
Q 013019 360 GGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAEILEA-H 427 (451)
Q Consensus 360 ~G~gdv~gG~Iv~~~eli~~lr~~~-------~~~G~~ls~~~a~l~lrgL~t----l~~Rl~~~~~nA~~Lae~L~~-~ 427 (451)
+++| .|+++.+++.. ++... ....++.+....+.+..+++. +....++..+....+.+.|++ .
T Consensus 201 gp~G---~g~l~v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~ 275 (379)
T TIGR03402 201 GPKG---VGALYIRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARI 275 (379)
T ss_pred CCCc---eEEEEECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhC
Confidence 5555 67777665431 11100 001122222222222223332 333334555666777777775 7
Q ss_pred CCeEE
Q 013019 428 PKVLL 432 (451)
Q Consensus 428 p~V~~ 432 (451)
|+++.
T Consensus 276 ~~~~~ 280 (379)
T TIGR03402 276 PDARL 280 (379)
T ss_pred CCEEE
Confidence 77644
No 209
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.77 E-value=8.8e-17 Score=170.21 Aligned_cols=210 Identities=18% Similarity=0.218 Sum_probs=149.7
Q ss_pred HHHHHHHHHhhhCC---CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC----CC
Q 013019 212 TVVVEEKMSALEGA---ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID----PA 283 (451)
Q Consensus 212 ~~~Lee~LA~l~ga---e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd----~~ 283 (451)
++.+.+.+....|. ++.|++|+|+ +|+.+++..+++|||.|++.+|+|.+....+ +..|+++..++ ..
T Consensus 138 R~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~----~~~g~~~~~vp~d~~G~ 213 (459)
T COG1167 138 REAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQAL----EALGARVIPVPVDEDGI 213 (459)
T ss_pred HHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHH----HHcCCcEEecCCCCCCC
Confidence 33444444433342 3456666666 9999999999999999999999999977554 45566666554 45
Q ss_pred CHHHHHHhhcCCCeEEEEEeCCC--CCccccccH---HHHHHHHHhcCCEEEEecCCCCCCcc-c------cc-cCCCcE
Q 013019 284 DMEGLEAALNNNNVSLFFTESPT--NPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ-K------AL-SLGADL 350 (451)
Q Consensus 284 D~d~Le~ai~~~~tklV~lesPs--NPtG~v~DL---~~IaelA~~~g~~lVVD~tfa~~~~~-~------pl-~~GaDi 350 (451)
|+|+|+++++..++|++|+ +|+ ||||..+++ ++|.++|++||+++|.|+.|+..... . .+ ..+-.|
T Consensus 214 ~~e~le~~~~~~~~k~~y~-~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rVi 292 (459)
T COG1167 214 DPEALEEALAQWKPKAVYV-TPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVI 292 (459)
T ss_pred CHHHHHHHHhhcCCcEEEE-CCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEE
Confidence 8999999998766899988 554 999999985 57999999999999999998653211 1 11 225669
Q ss_pred EEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHH----Hh-hHHHHHHH-HHHHHHHHHHHHHH
Q 013019 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII----RG-MKTLHLRV-QQQNSTALRMAEIL 424 (451)
Q Consensus 351 Vv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~l----rg-L~tl~~Rl-~~~~~nA~~Lae~L 424 (451)
++.||||.+... ++.||+++++++++++...+.......+.+....+. .| ....-.|+ +...+....+.+.|
T Consensus 293 y~gSFSK~l~Pg--lRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L 370 (459)
T COG1167 293 YLGSFSKTLAPG--LRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEAL 370 (459)
T ss_pred EEeeehhhcccc--cceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999854 589999999999999988877766666665532222 32 22222333 33445566677788
Q ss_pred HcCC
Q 013019 425 EAHP 428 (451)
Q Consensus 425 ~~~p 428 (451)
+++.
T Consensus 371 ~~~~ 374 (459)
T COG1167 371 AEYL 374 (459)
T ss_pred HHhC
Confidence 8763
No 210
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.77 E-value=7e-17 Score=164.90 Aligned_cols=213 Identities=18% Similarity=0.196 Sum_probs=149.9
Q ss_pred hHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 211 TTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 211 t~~~Lee~LA~l~gae----~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
..+.+++.+++++|++ ..++++||++++..++.+++.+||++++..+.+.+.. +...++..|+++..++.
T Consensus 36 ~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~a~~~g~~~~~v~~~~~~ 113 (363)
T TIGR02326 36 VVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGAR--IVQIAEYLGIPHHVVDTGEVE 113 (363)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCCC
Confidence 4567899999999974 2455678889999999999989988766555444322 23445677888777653
Q ss_pred -CCHHHHHHhhcCC-CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEECCcccC
Q 013019 283 -ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFI 359 (451)
Q Consensus 283 -~D~d~Le~ai~~~-~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S~SK~l 359 (451)
.|+++++++++++ ++++|.+.++.||||...|+++|.++||++|+++++|++++.+. ..+..++++|+++.|++|++
T Consensus 114 ~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l 193 (363)
T TIGR02326 114 PPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCI 193 (363)
T ss_pred CCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCcccc
Confidence 3789999998753 36788888899999999999999999999999999999875432 22333568999999999998
Q ss_pred CccccceeEEEEeCHHHHHHHHHHhH------------h---hC---CCccHHHHHHHHHhhHH------HHHHHHHHHH
Q 013019 360 GGHNDVLAGSISGSGKLVTQIRNLHH------------V---LG---GALNPNAAYLIIRGMKT------LHLRVQQQNS 415 (451)
Q Consensus 360 ~G~gdv~gG~Iv~~~eli~~lr~~~~------------~---~G---~~ls~~~a~l~lrgL~t------l~~Rl~~~~~ 415 (451)
+|+. ..|+++.+++.++++..... . .| ...+......+..+++. +..+.+++.+
T Consensus 194 ~~p~--G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~ 271 (363)
T TIGR02326 194 QGVP--GFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQ 271 (363)
T ss_pred ccCC--cceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 7664 25999999887776532100 0 01 12222332222223322 3345667778
Q ss_pred HHHHHHHHHHcC
Q 013019 416 TALRMAEILEAH 427 (451)
Q Consensus 416 nA~~Lae~L~~~ 427 (451)
++..+.+.|+++
T Consensus 272 ~~~~l~~~L~~~ 283 (363)
T TIGR02326 272 NQKTLVAGMRAL 283 (363)
T ss_pred HHHHHHHHHHHc
Confidence 888888888776
No 211
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.76 E-value=4.4e-17 Score=171.34 Aligned_cols=214 Identities=21% Similarity=0.277 Sum_probs=153.9
Q ss_pred HHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc-cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC----CH
Q 013019 213 VVVEEKMSALEGAE--STVIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----DM 285 (451)
Q Consensus 213 ~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all-~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~----D~ 285 (451)
.++++++++++|.+ ..+++++|++++..+++++. .+||+|+++++.|+.+...+.......|+++..++.. |+
T Consensus 115 ~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d~ 194 (447)
T PRK00451 115 FEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTDL 194 (447)
T ss_pred HHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCCH
Confidence 34557789999974 34556677788888888874 7899999999999987777665566678888887653 78
Q ss_pred HHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEE--ecCCCCCCccccccCCCcEEEECCccc-----
Q 013019 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI--DGTFATPLNQKALSLGADLVLHSATKF----- 358 (451)
Q Consensus 286 d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVV--D~tfa~~~~~~pl~~GaDiVv~S~SK~----- 358 (451)
++|+++++++ +++|++++| |+||.+.|+++|.++||++|+++++ |.. ..+....+.++|+|+++.|..|+
T Consensus 195 ~~l~~~i~~~-t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~~~~~~~D~~~~s~~k~~~~~~ 271 (447)
T PRK00451 195 EALEAAVDDD-TAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKPPGEYGADIVVGEGQPLGIPLS 271 (447)
T ss_pred HHHHHhcCCC-eEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCCcccCCCCEEEECCCcCCCCCC
Confidence 9999999875 999999999 8999999999999999999999998 543 22333345678999999977665
Q ss_pred CCccccceeEEEEeCHHHHHHHH----------------------------HHhHhhCCCc-cH---HHHHHHHH--hhH
Q 013019 359 IGGHNDVLAGSISGSGKLVTQIR----------------------------NLHHVLGGAL-NP---NAAYLIIR--GMK 404 (451)
Q Consensus 359 l~G~gdv~gG~Iv~~~eli~~lr----------------------------~~~~~~G~~l-s~---~~a~l~lr--gL~ 404 (451)
++|++ +|+++.++++++++. ..+....... .. ..++..++ +-+
T Consensus 272 ~~Gpg---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~ 348 (447)
T PRK00451 272 FGGPY---LGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPE 348 (447)
T ss_pred CCCCC---chHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHH
Confidence 56664 889888888877631 1110000000 11 22222222 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 013019 405 TLHLRVQQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 405 tl~~Rl~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
.+....++..++++.+.+.|++.++++.
T Consensus 349 g~~~~~~~~~~~~~~l~~~L~~~~g~~~ 376 (447)
T PRK00451 349 GLRELAEQNHQKAHYLAERLAEIGGVEL 376 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCEEe
Confidence 4556667788889999999999887643
No 212
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.76 E-value=1.3e-16 Score=161.26 Aligned_cols=214 Identities=17% Similarity=0.215 Sum_probs=151.7
Q ss_pred hhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 210 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae----~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
+..+.+++.|++++|.+ ..+++++|++++..++.+++++||++++..+.+.+.. +...++..|.++..++.
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~--~~~~a~~~g~~~~~i~~~~~ 108 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGER--LAKICEYLGIPHTDLNFSEY 108 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhH--HHHHHHHcCCceEEEecCCC
Confidence 56788999999999974 2345789999999999999988888666555443321 22345567877776642
Q ss_pred --CCHHHHHHhhcCC-CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEECCccc
Q 013019 283 --ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKF 358 (451)
Q Consensus 283 --~D~d~Le~ai~~~-~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S~SK~ 358 (451)
.|+++++++++++ ++++|++.+++|++|.+.|+++|.++|+++|+++|+|++++.+. ......+++|+++.|++|+
T Consensus 109 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~ 188 (355)
T TIGR03301 109 EPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKC 188 (355)
T ss_pred CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcc
Confidence 3789999998642 46788888899999999999999999999999999999765432 2223356899999999999
Q ss_pred CCccccceeEEEEeCHHHHHHHHHHhH-----------------hhCCCccHHHHHHHHHhhHH------HHHHHHHHHH
Q 013019 359 IGGHNDVLAGSISGSGKLVTQIRNLHH-----------------VLGGALNPNAAYLIIRGMKT------LHLRVQQQNS 415 (451)
Q Consensus 359 l~G~gdv~gG~Iv~~~eli~~lr~~~~-----------------~~G~~ls~~~a~l~lrgL~t------l~~Rl~~~~~ 415 (451)
++|+. ..|+++++++++++++.... ....+.+....+.+..+++. +..++++..+
T Consensus 189 l~~~~--G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~ 266 (355)
T TIGR03301 189 LEGVP--GFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRR 266 (355)
T ss_pred cccCC--ceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 86543 25899999998887652100 00112333333333333332 3445667778
Q ss_pred HHHHHHHHHHcC
Q 013019 416 TALRMAEILEAH 427 (451)
Q Consensus 416 nA~~Lae~L~~~ 427 (451)
+++.+.+.|+++
T Consensus 267 ~~~~~~~~L~~~ 278 (355)
T TIGR03301 267 NRELLVDGLRAL 278 (355)
T ss_pred HHHHHHHHHHHc
Confidence 888888988876
No 213
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.76 E-value=1.7e-16 Score=164.37 Aligned_cols=212 Identities=15% Similarity=0.130 Sum_probs=137.2
Q ss_pred hHHHHHHHHHhhhC-------CCcE--EEeCCHH-HHHHHHHHHH--ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEE
Q 013019 211 TTVVVEEKMSALEG-------AEST--VIMASGM-SASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (451)
Q Consensus 211 t~~~Lee~LA~l~g-------ae~~--vv~sSG~-aAi~~al~al--l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~ 278 (451)
....|++++++++. .++. +++|+|. +|+..++.++ +++||+|++++|+|...... ++..|.++.
T Consensus 70 G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~----~~~~g~~~v 145 (396)
T PRK09257 70 GLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAI----FEAAGLEVK 145 (396)
T ss_pred CCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHH----HHHcCCcEE
Confidence 34567777777642 1223 2556665 8999887655 58999999999999987644 345666665
Q ss_pred EeC-------CCCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-----
Q 013019 279 VID-------PADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (451)
Q Consensus 279 ~vd-------~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----- 341 (451)
.++ ..|+++++++++. .+++++++++|+||||.+++ +++|+++|++||+++|+|++|......
T Consensus 146 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~ 225 (396)
T PRK09257 146 TYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDA 225 (396)
T ss_pred EEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHH
Confidence 543 2478899888752 23567777999999999986 677888999999999999998754321
Q ss_pred ccc---c-CC-CcEEEECCcccCCccccceeEEEE--e-CHHHH----HHHHHHhHhhCCCccHHHHHHHHHhh------
Q 013019 342 KAL---S-LG-ADLVLHSATKFIGGHNDVLAGSIS--G-SGKLV----TQIRNLHHVLGGALNPNAAYLIIRGM------ 403 (451)
Q Consensus 342 ~pl---~-~G-aDiVv~S~SK~l~G~gdv~gG~Iv--~-~~eli----~~lr~~~~~~G~~ls~~~a~l~lrgL------ 403 (451)
.++ . .+ ..+++.|+||.++.+| .+.||++ . +++.+ .+++..........+...+.++.+.+
T Consensus 226 ~~~~~~~~~~~~vi~i~SfSK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 304 (396)
T PRK09257 226 YGLRAFAAAGLELLVASSFSKNFGLYG-ERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELR 304 (396)
T ss_pred HHHHHHHhcCCcEEEEEEcCCcCcccc-ccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHH
Confidence 111 1 11 3488999999998766 5678876 2 44433 33333322222233444433333222
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 404 ----KTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 404 ----~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+.+....++..++.+.+.+.|+++
T Consensus 305 ~~~~~~~~~~r~~~~~rr~~l~~~L~~~ 332 (396)
T PRK09257 305 AEWEAELEEMRERIKAMRQLLVEALKAK 332 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 222233455566777788888876
No 214
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.76 E-value=1.1e-16 Score=168.45 Aligned_cols=184 Identities=18% Similarity=0.155 Sum_probs=142.5
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc--------------cCCCeEEEcCCCCcchHHHHHHhhhcCCc
Q 013019 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------------PAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all--------------~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi 275 (451)
...++||++||+++|.+++++++||..|+..++.++. ..+|.|+....+|.+.+..+...-.+-+.
T Consensus 147 ~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a 226 (476)
T PLN02955 147 TYHRLLESSLADLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNV 226 (476)
T ss_pred HHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCc
Confidence 4567899999999999999999999999999988873 45678888888888876555322122247
Q ss_pred EEEEeCCCCHHHHHHhhcCC--CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc---------cc
Q 013019 276 TATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------AL 344 (451)
Q Consensus 276 ~v~~vd~~D~d~Le~ai~~~--~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~---------pl 344 (451)
++..++..|+++|++.++.. +.++|++|...++.|.+.|+++|.++|+++|++||+||+++.+.... .+
T Consensus 227 ~~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~ 306 (476)
T PLN02955 227 EVFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNC 306 (476)
T ss_pred eEEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCC
Confidence 77778889999999888532 35799999999999999999999999999999999999987653322 01
Q ss_pred cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH--hhCCCccHHHHH
Q 013019 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAY 397 (451)
Q Consensus 345 ~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--~~G~~ls~~~a~ 397 (451)
....||++.|++|.+|.. ||++++++++++.++.... .++..+++..+.
T Consensus 307 ~~di~ii~~TLsKA~G~~----GGfi~gs~~~~~~l~~~~~~~ifStalpp~~aa 357 (476)
T PLN02955 307 EADVDLCVGTLSKAAGCH----GGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAA 357 (476)
T ss_pred CCCCcEEEEeCccchhcc----CceeecHHHHHHHHHHhCCCCeecccccHHHHH
Confidence 123689999999999865 6999999988888876443 234444444433
No 215
>PRK07908 hypothetical protein; Provisional
Probab=99.75 E-value=8.3e-17 Score=163.78 Aligned_cols=209 Identities=16% Similarity=0.179 Sum_probs=141.4
Q ss_pred cCCCch-hHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 205 GRYGNP-TTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 205 ~R~~np-t~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
..|+.+ ....|+++++++++. ++.+++++|+ +++..++. +++| .+++..|+|.... ..++..|+++..++
T Consensus 52 ~~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l~~~-~viv~~P~y~~~~----~~~~~~G~~i~~v~ 124 (349)
T PRK07908 52 AAYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--LRPR-RAAVVHPSFTEPE----AALRAAGIPVHRVV 124 (349)
T ss_pred hcCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--cCCC-eEEEeCCCChHHH----HHHHHcCCEEEeec
Confidence 345443 567899999999985 4455555555 88888776 5665 5667788887654 34456788877664
Q ss_pred CC-----CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc--c---ccCCCcEE
Q 013019 282 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--A---LSLGADLV 351 (451)
Q Consensus 282 ~~-----D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~--p---l~~GaDiV 351 (451)
.. |++ .+++ ++++|++++|+||||.+++.++|.++|++ +.++|+|++|...+... + .+....++
T Consensus 125 ~~~~~~~d~~----~l~~-~~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~ 198 (349)
T PRK07908 125 LDPPFRLDPA----AVPD-DADLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLV 198 (349)
T ss_pred cCcccCcChh----Hhcc-CCCEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEE
Confidence 32 333 3444 48999999999999999999999999974 78899999986432111 1 12223478
Q ss_pred EECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHHHc
Q 013019 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR-----GMKTLHLRVQQQNSTALRMAEILEA 426 (451)
Q Consensus 352 v~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lr-----gL~tl~~Rl~~~~~nA~~Lae~L~~ 426 (451)
+.|+||.++.+| ++.||++++++++++++.....+. +++.....+.. ..+.+....++..++.+.+.+.|++
T Consensus 199 i~S~SK~~~l~G-lRiG~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 275 (349)
T PRK07908 199 LRSLTKTWSLAG-LRVGYALGAPDVLARLTRGRAHWP--VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA 275 (349)
T ss_pred EeecccccCCcc-ceeeeeecCHHHHHHHHhcCCCCC--ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 889999998665 578999999999998887654432 23332222211 2234444455666777778888887
Q ss_pred CCCe
Q 013019 427 HPKV 430 (451)
Q Consensus 427 ~p~V 430 (451)
+ ++
T Consensus 276 ~-~~ 278 (349)
T PRK07908 276 V-GA 278 (349)
T ss_pred C-Cc
Confidence 6 44
No 216
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.75 E-value=3.8e-17 Score=164.99 Aligned_cols=196 Identities=16% Similarity=0.134 Sum_probs=140.4
Q ss_pred HHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHHcc------------CC--CeEEEcCCCCcchHHHHHHhhhcC
Q 013019 212 TVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP------------AG--GHIVTTTDCYRKTRIFIETVLPKM 273 (451)
Q Consensus 212 ~~~Lee~LA~l~gae----~~vv~sSG~aAi~~al~all~------------~G--D~VIv~~~~Y~~t~~~l~~~l~~~ 273 (451)
.+++.+++++++|.+ +.+++++|++|+..++.++.. +| +.|+++++.|....... ...
T Consensus 40 e~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~----~~~ 115 (345)
T cd06450 40 EAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAA----AYL 115 (345)
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHH----HHH
Confidence 344555567777864 678888888999999888753 33 37888888888754333 334
Q ss_pred CcEEEEeC-----CCCHHHHHHhhcCC-----CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc--
Q 013019 274 GITATVID-----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-- 341 (451)
Q Consensus 274 Gi~v~~vd-----~~D~d~Le~ai~~~-----~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-- 341 (451)
|.++..++ ..|+++|++++++. ++++|+++.|+||+|.+.|+++|+++|+++|+++++|++++.+...
T Consensus 116 g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~ 195 (345)
T cd06450 116 DVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFP 195 (345)
T ss_pred hcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhCh
Confidence 66666654 24799999999750 3789999999999999999999999999999999999998754321
Q ss_pred --cc--cc-CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHh--hHHHHHHHHHHH
Q 013019 342 --KA--LS-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG--MKTLHLRVQQQN 414 (451)
Q Consensus 342 --~p--l~-~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrg--L~tl~~Rl~~~~ 414 (451)
.. .. .++|.++.|++|+++++. .+|++..+ ....|.+++. ...+..++++..
T Consensus 196 ~~~~~~~~~~~~d~~~~s~~K~l~~p~--g~g~~~~~-------------------~~~~~~~l~~l~~~g~~~~~~~~~ 254 (345)
T cd06450 196 EPRHLDFGIERVDSISVDPHKYGLVPL--GCSAVLVR-------------------ALKLWATLRRFGRDGYGEHIDRIV 254 (345)
T ss_pred hhHHHhcCccccCEEEEchhHhhCCCc--chHHHHHH-------------------HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 11 01 268999999999987653 35655433 2223333332 234566778888
Q ss_pred HHHHHHHHHHHcCCCeEE
Q 013019 415 STALRMAEILEAHPKVLL 432 (451)
Q Consensus 415 ~nA~~Lae~L~~~p~V~~ 432 (451)
+.++.+.+.|++.+++..
T Consensus 255 ~~~~~l~~~L~~~~~~~~ 272 (345)
T cd06450 255 DLAKYLAELIRADPGFEL 272 (345)
T ss_pred HHHHHHHHHHhcCCCeEE
Confidence 899999999999887744
No 217
>PLN02397 aspartate transaminase
Probab=99.75 E-value=1.9e-16 Score=166.00 Aligned_cols=213 Identities=16% Similarity=0.163 Sum_probs=137.8
Q ss_pred hhHHHHHHHHHhhhCC-------Cc-E----EEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEE
Q 013019 210 PTTVVVEEKMSALEGA-------ES-T----VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (451)
Q Consensus 210 pt~~~Lee~LA~l~ga-------e~-~----vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v 277 (451)
....+|++.+++++.. ++ . ++.++|..++...+..++.+||+|++++|.|...... ++..|.++
T Consensus 91 ~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~----~~~~g~~~ 166 (423)
T PLN02397 91 EGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNI----FRDAGVPV 166 (423)
T ss_pred CCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHH----HHHcCCeE
Confidence 3455677888776532 12 1 2334455556666666677999999999999886643 34556665
Q ss_pred EEeC-------CCCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc---
Q 013019 278 TVID-------PADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK--- 342 (451)
Q Consensus 278 ~~vd-------~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~--- 342 (451)
..++ ..|++.+++.+.. .+++++++++|+||||.+.+ +++|+++|++||+++|+|++|.......
T Consensus 167 ~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~ 246 (423)
T PLN02397 167 RTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDA 246 (423)
T ss_pred EEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhh
Confidence 5542 2378877777752 34789999999999999986 6678888999999999999987653211
Q ss_pred ---c---cc-CC-CcEEEECCcccCCccccceeEEEE---eCHHHHHHHH----HHhHhhCCCccHHHHHHHHHhhHH--
Q 013019 343 ---A---LS-LG-ADLVLHSATKFIGGHNDVLAGSIS---GSGKLVTQIR----NLHHVLGGALNPNAAYLIIRGMKT-- 405 (451)
Q Consensus 343 ---p---l~-~G-aDiVv~S~SK~l~G~gdv~gG~Iv---~~~eli~~lr----~~~~~~G~~ls~~~a~l~lrgL~t-- 405 (451)
+ +. .+ .-|++.|+||.++.+| .+.||++ +++++++++. ........+.+...+.++...|+.
T Consensus 247 ~~~~~~~~~~~~~~vI~~~SfSK~~~~~G-~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~ 325 (423)
T PLN02397 247 DAQSVRMFVEDGHEILVAQSYAKNMGLYG-ERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPE 325 (423)
T ss_pred hhHHHHHHHhcCCcEEEEEECcccCCCcc-ccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHH
Confidence 1 11 12 2488999999999776 4678763 3566555433 333222333444444444333321
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHcC
Q 013019 406 --------LHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 406 --------l~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+....++..++.+.+.+.|+++
T Consensus 326 ~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 355 (423)
T PLN02397 326 LFSEWTKELKGMADRIISMRQKLYDALEAR 355 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2333456667788888888876
No 218
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.74 E-value=4.8e-16 Score=163.18 Aligned_cols=212 Identities=15% Similarity=0.155 Sum_probs=156.3
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHH-HHHHHHHHHHcc---CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 210 PTTVVVEEKMSALEGAE---STVIMASGM-SASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae---~~vv~sSG~-aAi~~al~all~---~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
-....|++.++++.|.+ .++++++|+ .++.+++.++-. +||+||++...|.++. +.+...|+++.++|.
T Consensus 105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~----kAi~~~G~~pv~Vd~ 180 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCI----KAISTAGFEPRVIET 180 (444)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHH----HHHHHcCCeEEEeee
Confidence 34567899999999987 799999999 688888777642 5899999998877766 344566887777763
Q ss_pred --------CCHHHHHHhhcCC--CeEEEEEeCCC-CCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc------cccc
Q 013019 283 --------ADMEGLEAALNNN--NVSLFFTESPT-NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALS 345 (451)
Q Consensus 283 --------~D~d~Le~ai~~~--~tklV~lesPs-NPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~------~pl~ 345 (451)
.|+++|+++|++. ++.++++.+|+ .+.|.+.|+++|+++|++||+++|+|++|+..... ....
T Consensus 181 ~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~ 260 (444)
T TIGR03531 181 VLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIK 260 (444)
T ss_pred eecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhcccc
Confidence 3799999999752 35666776665 45567899999999999999999999999853211 2233
Q ss_pred CC-CcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCCccHHHHHHH--HHhhHHHHHHHHHHHHHHHHHH
Q 013019 346 LG-ADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLI--IRGMKTLHLRVQQQNSTALRMA 421 (451)
Q Consensus 346 ~G-aDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ls~~~a~l~--lrgL~tl~~Rl~~~~~nA~~La 421 (451)
.| +|+++.|++|++..+++ ||+++. +++++++++..............+|+. ..|.+.+...+++..++++.+.
T Consensus 261 ~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~ 338 (444)
T TIGR03531 261 VGRVDAVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLK 338 (444)
T ss_pred ccCCCeEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 44 69999999999997763 777766 678888777643222112223344443 3466888888888999999999
Q ss_pred HHHHcC
Q 013019 422 EILEAH 427 (451)
Q Consensus 422 e~L~~~ 427 (451)
+.|++.
T Consensus 339 ~~L~~l 344 (444)
T TIGR03531 339 ELLQKL 344 (444)
T ss_pred HHHHHH
Confidence 888764
No 219
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.74 E-value=2.8e-16 Score=161.58 Aligned_cols=211 Identities=18% Similarity=0.135 Sum_probs=145.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHH
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~ 287 (451)
.++..+++|++||+++|.+.+++++||+.|+..++..+.++||.|++....|+++...+.. +. +..+. +...|+++
T Consensus 54 ~~~~~~~~e~~la~~~~~~~~l~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~-~~--~~~~~-~~~~d~~~ 129 (370)
T PRK05937 54 PSSLLDDLEHKIAHFHGAPEAFIVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSV-IS--GWHQS-FRHNDLDH 129 (370)
T ss_pred ChHHHHHHHHHHHHHhCCCeEEEECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHH-cC--CceEE-ecCCCHHH
Confidence 4567899999999999999999999999998877666667889999989899887765533 22 44444 35678999
Q ss_pred HHHhhcC-----CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcccc-----ccCCC---cEEEEC
Q 013019 288 LEAALNN-----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA-----LSLGA---DLVLHS 354 (451)
Q Consensus 288 Le~ai~~-----~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~p-----l~~Ga---DiVv~S 354 (451)
|++.+++ +++.+|++++++|++|.+.|+++|.++|+++|+++++|++++.+..... ..+|. ++++.|
T Consensus 130 l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~t 209 (370)
T PRK05937 130 LESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVT 209 (370)
T ss_pred HHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEe
Confidence 9998863 2366888999999999999999999999999999999999876532211 12332 367889
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHHhH--hhCCCccHHHHHHHHHhhHHHH----HHHHHHHHHHHHHHHHHHc
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTLH----LRVQQQNSTALRMAEILEA 426 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--~~G~~ls~~~a~l~lrgL~tl~----~Rl~~~~~nA~~Lae~L~~ 426 (451)
++|.+++.| +| ++..++..+.+..... .+....++.....+..+++.+. .+.++..++...+.+.|..
T Consensus 210 lsK~~g~~G---~~-vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~ 283 (370)
T PRK05937 210 YSKALGSMG---AA-LLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSS 283 (370)
T ss_pred chhhhhcCc---eE-EEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC
Confidence 999998765 44 4555665555443211 1223345554444444444432 1233444455555555543
No 220
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.73 E-value=2e-16 Score=169.18 Aligned_cols=144 Identities=17% Similarity=0.302 Sum_probs=106.0
Q ss_pred EEEeC-CHHHHHHHHHHH-----HccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-------CCCHHHHHHhhcC
Q 013019 228 TVIMA-SGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-------PADMEGLEAALNN 294 (451)
Q Consensus 228 ~vv~s-SG~aAi~~al~a-----ll~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd-------~~D~d~Le~ai~~ 294 (451)
.|+++ +|++|+..++.+ ++++||+|++++|.|........ +...++.+..++ ..|+++|++++++
T Consensus 163 ~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~--l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~ 240 (527)
T PRK09275 163 DLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPE--LPRYDLEVVHINADEENEWQYPDSELEKLRDP 240 (527)
T ss_pred eEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHH--HcCCCeEEEEeecCcccCCCCCHHHHHhhcCC
Confidence 45555 555899888876 68999999999999988654332 223344444442 1367899998877
Q ss_pred CCeEEEEEeCCCCCcccccc---HHHHHHHHHh--cCCEEEEecCCCCCCcc-cc-ccC--CCcEEEECCcccCCccccc
Q 013019 295 NNVSLFFTESPTNPFLRCVD---VKLVSDLCHK--KGAIVCIDGTFATPLNQ-KA-LSL--GADLVLHSATKFIGGHNDV 365 (451)
Q Consensus 295 ~~tklV~lesPsNPtG~v~D---L~~IaelA~~--~g~~lVVD~tfa~~~~~-~p-l~~--GaDiVv~S~SK~l~G~gdv 365 (451)
++|+|++++|+||||.+++ +++|+++|++ ++++||+|++|...... .+ ... ...|++.|+||+++.+| .
T Consensus 241 -~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG-~ 318 (527)
T PRK09275 241 -SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATG-W 318 (527)
T ss_pred -CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcH-h
Confidence 4999999999999999987 6778888854 59999999998764321 11 111 24589999999998777 4
Q ss_pred eeEEEEeCHH
Q 013019 366 LAGSISGSGK 375 (451)
Q Consensus 366 ~gG~Iv~~~e 375 (451)
+.||++++++
T Consensus 319 RlG~i~~~~~ 328 (527)
T PRK09275 319 RLGVIALHED 328 (527)
T ss_pred HHhhhhcCch
Confidence 6789888875
No 221
>PLN02672 methionine S-methyltransferase
Probab=99.73 E-value=5.8e-16 Score=175.64 Aligned_cols=211 Identities=16% Similarity=0.114 Sum_probs=148.2
Q ss_pred HHHHHHHHHhhhCCC----cEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 212 TVVVEEKMSALEGAE----STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 212 ~~~Lee~LA~l~gae----~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
++++.+++++.+|.+ +.+++++|+ +++..++.+++++||+|+++.|+|+..... ++..|.++..++.
T Consensus 736 r~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~----a~~~Ga~vv~Vpl~~e~ 811 (1082)
T PLN02672 736 RPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSA----AKFLKANFRRIPTKSSD 811 (1082)
T ss_pred HHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHH----HHHcCCEEEEEeccccc
Confidence 678999999988752 367777777 777788899999999999999999986643 4456777666543
Q ss_pred ---CCHHHHHHhhcCCCeEEEEEeCCC-CCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-cc---------c-
Q 013019 283 ---ADMEGLEAALNNNNVSLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-KA---------L- 344 (451)
Q Consensus 283 ---~D~d~Le~ai~~~~tklV~lesPs-NPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~-~p---------l- 344 (451)
.|+++|++++++.+.++|++++|+ ||||.+++ +++|+++|++||++||+|++|...... .+ +
T Consensus 812 gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~ 891 (1082)
T PLN02672 812 GFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILS 891 (1082)
T ss_pred CCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHH
Confidence 257889999865334689999998 99999986 677888899999999999998632211 00 0
Q ss_pred cC------CCcEEEECCcccCCccccceeEEEEeCH-HHHHHHHHHhHhhCCC-ccHHHHHHHHHh--------hHHHHH
Q 013019 345 SL------GADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA-LNPNAAYLIIRG--------MKTLHL 408 (451)
Q Consensus 345 ~~------GaDiVv~S~SK~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~~G~~-ls~~~a~l~lrg--------L~tl~~ 408 (451)
.+ ..-+++.|+||.++.+| ++.||+++++ +++++++......+.. .+...+..++.. .+.+..
T Consensus 892 ~~~~~sks~nVIvL~SfSKkf~lpG-LRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e 970 (1082)
T PLN02672 892 RLKSSNPSFAVALLGGLSTELLSGG-HEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAE 970 (1082)
T ss_pred HhccccCCceEEEEeCcHHhhccHH-HHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHH
Confidence 01 12478889999999887 6789999864 5888887754333222 122222222211 122333
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q 013019 409 RVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 409 Rl~~~~~nA~~Lae~L~~~ 427 (451)
..+...++.+.+.+.|+++
T Consensus 971 ~r~~Lk~rRd~L~e~L~~~ 989 (1082)
T PLN02672 971 QKKILKSRAERLKETLEAC 989 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHC
Confidence 4455677888899999876
No 222
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.72 E-value=1.5e-15 Score=154.82 Aligned_cols=213 Identities=14% Similarity=0.106 Sum_probs=148.4
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHcc----CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVP----AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 212 ~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all~----~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
.++++++|++++|.+ ..+++++|++++..++.++.. +||+|++.++.|.+.. ..++..|+++..++.
T Consensus 61 ~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~----~~~~~~g~~~~~v~~~~~ 136 (371)
T PRK13520 61 EEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFD----KAADMLGVELRRAPLDDD 136 (371)
T ss_pred HHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHH----HHHHHcCceEEEecCCCC
Confidence 367899999999974 457777888999888877654 5789999998887633 344566888877753
Q ss_pred --CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc---ccc--c---cCCCcEEE
Q 013019 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---QKA--L---SLGADLVL 352 (451)
Q Consensus 283 --~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~---~~p--l---~~GaDiVv 352 (451)
.|+++|+++++++ +++|++..++|++|.+.|+++|.++|+++|+++++|++|+.+.. ... + ..|+|.+.
T Consensus 137 ~~~d~~~l~~~i~~~-~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~ 215 (371)
T PRK13520 137 YRVDVKAVEDLIDDN-TIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSIT 215 (371)
T ss_pred CcCCHHHHHHHHhhC-CEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEE
Confidence 3799999999875 77777778899999999999999999999999999999864321 111 1 24789999
Q ss_pred ECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhC--------CCccH---HHHHHHHHhh--HHHHHHHHHHHHHHHH
Q 013019 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG--------GALNP---NAAYLIIRGM--KTLHLRVQQQNSTALR 419 (451)
Q Consensus 353 ~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G--------~~ls~---~~a~l~lrgL--~tl~~Rl~~~~~nA~~ 419 (451)
.|.+|+..++. ..|++++.++++++.+......+. ++.+. ..++.+++.+ +.+..+.++..++++.
T Consensus 216 ~s~~K~~~a~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~ 294 (371)
T PRK13520 216 IDPHKMGLAPI-PAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRW 294 (371)
T ss_pred ECCccccCccC-CceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHH
Confidence 99999865432 134555567777776642211111 11111 2223333322 2244567778888889
Q ss_pred HHHHHHcCCCeE
Q 013019 420 MAEILEAHPKVL 431 (451)
Q Consensus 420 Lae~L~~~p~V~ 431 (451)
+.+.|++. ++.
T Consensus 295 l~~~L~~~-g~~ 305 (371)
T PRK13520 295 LAEELKER-GFE 305 (371)
T ss_pred HHHHHHhC-CCE
Confidence 99999876 554
No 223
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.72 E-value=1.2e-15 Score=155.71 Aligned_cols=213 Identities=13% Similarity=0.094 Sum_probs=147.7
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc------cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV------PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all------~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
...+.++++|++++|.+ ..+++++|++++..++.++. ++||+|+++++.|.+.. ..++..|+++..++
T Consensus 59 ~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~----~~~~~~G~~~~~v~ 134 (373)
T TIGR03812 59 KIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFE----KAAEMLGLELRYAP 134 (373)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHH----HHHHHcCCeEEEEe
Confidence 44578999999999974 45778888888877776654 36799999998887643 34556788887775
Q ss_pred C-----CCHHHHHHhhcCCCe-EEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc--------ccccc--
Q 013019 282 P-----ADMEGLEAALNNNNV-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--------QKALS-- 345 (451)
Q Consensus 282 ~-----~D~d~Le~ai~~~~t-klV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~--------~~pl~-- 345 (451)
. .|+++++++++++ + .++++ +|+||+|.+.|+++|.++|+++|+++++|++|+.... ...++
T Consensus 135 ~~~~~~~d~~~l~~~l~~~-~~~vv~~-~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~ 212 (373)
T TIGR03812 135 LDEDYTVDVKDVEDLIDDN-TIGIVGI-AGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFS 212 (373)
T ss_pred eCCCCCcCHHHHHHHHhhC-cEEEEEE-CCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcccc
Confidence 3 4799999999775 5 45555 5899999999999999999999999999999864321 11122
Q ss_pred -CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCC--------CccHHHH---HHHHHhh--HHHHHHHH
Q 013019 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--------ALNPNAA---YLIIRGM--KTLHLRVQ 411 (451)
Q Consensus 346 -~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~--------~ls~~~a---~l~lrgL--~tl~~Rl~ 411 (451)
.|+|.+..|.+|+..++. ..||+++.++++++.++........ ..+.... +..++-+ +.+..+.+
T Consensus 213 ~~~~d~~~~s~~K~~~~~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~ 291 (373)
T TIGR03812 213 LPGVQSITIDPHKMGLSPI-PAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVA 291 (373)
T ss_pred CCCCCEEEECccccCCCcC-CceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHH
Confidence 378999999999754332 1356777788888776422221111 1122222 2222222 23445677
Q ss_pred HHHHHHHHHHHHHHcCCC
Q 013019 412 QQNSTALRMAEILEAHPK 429 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~~p~ 429 (451)
+..++++.+.+.|++.+.
T Consensus 292 ~~~~~~~~l~~~L~~~g~ 309 (373)
T TIGR03812 292 ECMENTRYLVEELKKIGF 309 (373)
T ss_pred HHHHHHHHHHHHHHhCCC
Confidence 888899999999988753
No 224
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.71 E-value=1.6e-15 Score=152.03 Aligned_cols=219 Identities=22% Similarity=0.311 Sum_probs=149.4
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHHccCCCeEEEcC-CCCcchHHHHH------HhhhcCCcE
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------TVLPKMGIT 276 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv---~sSG~aAi~~al~all~~GD~VIv~~-~~Y~~t~~~l~------~~l~~~Gi~ 276 (451)
|++..++.||+..|+.+|+|++++ +-||+.||.++|.++++|||+++... .-|......+. ..++.+|+.
T Consensus 51 Y~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~ 130 (403)
T PF06838_consen 51 YDDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIK 130 (403)
T ss_dssp TT-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-E
T ss_pred CCCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCce
Confidence 367889999999999999999998 67999999999999999999988643 44655444431 235778999
Q ss_pred EEEeCC-----CCHHHHHHhhcCCCeEEEEEeCCC----CCccccccHHHHHHHHHh--cCCEEEEecCCCCCC-ccccc
Q 013019 277 ATVIDP-----ADMEGLEAALNNNNVSLFFTESPT----NPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPL-NQKAL 344 (451)
Q Consensus 277 v~~vd~-----~D~d~Le~ai~~~~tklV~lesPs----NPtG~v~DL~~IaelA~~--~g~~lVVD~tfa~~~-~~~pl 344 (451)
.+.++. .|.+.++++++++ ||+|++.--. -|...+.+|+++.+++|+ -+++++|||+|+.+. ...|.
T Consensus 131 Y~~v~L~~dg~~D~~~i~~~~~~~-tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~ 209 (403)
T PF06838_consen 131 YREVPLTEDGTIDWEAIKKALKPN-TKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEPT 209 (403)
T ss_dssp EEE--B-TTSSB-HHHHHHHHHTT-EEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GG
T ss_pred eEEEeecCCCCcCHHHHHHhhccC-ceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCcc
Confidence 888863 3799999999974 9999996543 344556678888888887 479999999999875 46788
Q ss_pred cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhh------CCCccHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 013019 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL------GGALNPNAAYLIIRGMKTLHLRVQQQNSTAL 418 (451)
Q Consensus 345 ~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~------G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~ 418 (451)
+.|+|++..|+-|-.||.--..||||+++++++++.......- |.++. ...++.+||---+.-+.+..+.+.
T Consensus 210 ~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~--~~R~~~QGlFlAP~vV~eAlKgai 287 (403)
T PF06838_consen 210 EVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLG--TNRLMFQGLFLAPHVVGEALKGAI 287 (403)
T ss_dssp GGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TT--THHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccccCcc--hHHHHHhHHhhchHHHHHHHHHHH
Confidence 9999999999999999875557999999999999876543322 22221 233445566555555666667777
Q ss_pred HHHHHHHcCC
Q 013019 419 RMAEILEAHP 428 (451)
Q Consensus 419 ~Lae~L~~~p 428 (451)
..+..+++..
T Consensus 288 f~A~~fe~lG 297 (403)
T PF06838_consen 288 FAAALFEKLG 297 (403)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 7777777653
No 225
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.71 E-value=1.4e-15 Score=162.66 Aligned_cols=145 Identities=17% Similarity=0.253 Sum_probs=106.8
Q ss_pred cEEEeCCHHHHHHHHHHH-----HccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC------------CCHHHHH
Q 013019 227 STVIMASGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------------ADMEGLE 289 (451)
Q Consensus 227 ~~vv~sSG~aAi~~al~a-----ll~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~------------~D~d~Le 289 (451)
+.+++.+|++|+..++.+ ++.+||+|++++|.|........ +...|+++..++. .|.++|+
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~--l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~ 234 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPE--LPRYDFEVVRIKADEMTEDGTHTWQYPDKELE 234 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHH--HhcCCcEEEEeecccccccccccCCCCHHHHH
Confidence 344455555899888876 78999999999999988654332 2334555544432 2568899
Q ss_pred HhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhc--CCEEEEecCCCCCCcc--ccccC--CCcEEEECCcccCC
Q 013019 290 AALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKK--GAIVCIDGTFATPLNQ--KALSL--GADLVLHSATKFIG 360 (451)
Q Consensus 290 ~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~--g~~lVVD~tfa~~~~~--~pl~~--GaDiVv~S~SK~l~ 360 (451)
+++++ ++|+|++++|+||||.+++ +++|+++|++| +++||+||+|+..... ..... ...|++.|+||+++
T Consensus 235 ~~~~~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg 313 (521)
T TIGR03801 235 KLRDP-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFG 313 (521)
T ss_pred HhcCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhcc
Confidence 88776 4999999999999999987 67788889886 8999999998754321 11111 23589999999998
Q ss_pred ccccceeEEEEeCHH
Q 013019 361 GHNDVLAGSISGSGK 375 (451)
Q Consensus 361 G~gdv~gG~Iv~~~e 375 (451)
.+| .+.|+++++++
T Consensus 314 ~~G-~RlG~i~~~~~ 327 (521)
T TIGR03801 314 ATG-WRLGTIALHKD 327 (521)
T ss_pred Cch-hhhhhhhcCch
Confidence 777 46788888754
No 226
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.71 E-value=1.5e-15 Score=157.53 Aligned_cols=217 Identities=17% Similarity=0.163 Sum_probs=149.5
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc---------CC-CeEEEcCCCCcc-hHHHHHHhh-----
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AG-GHIVTTTDCYRK-TRIFIETVL----- 270 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~---------~G-D~VIv~~~~Y~~-t~~~l~~~l----- 270 (451)
..++...+|+++|+++.+.+.+++++||++|+..++..... +| ++||..+..|.+ +...+...-
T Consensus 79 ~~~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~ 158 (396)
T PRK04073 79 FHSDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYK 158 (396)
T ss_pred cCCHHHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccc
Confidence 45677888999999999888899999999999998876532 34 678888776665 332221100
Q ss_pred hcCC---cEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCC-Ccc-
Q 013019 271 PKMG---ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LNQ- 341 (451)
Q Consensus 271 ~~~G---i~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~-~~~- 341 (451)
..++ ..+..++..|+++++++++++ +++|++|.|+||+|.+.+ +++|.++|+++|+++|+||++... ...
T Consensus 159 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~-~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~ 237 (396)
T PRK04073 159 RGFGPMLPGIKKIPYGDLEALKAAITPN-TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGK 237 (396)
T ss_pred cCCCCCCCCceEeCCCCHHHHHHhcccC-eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcH
Confidence 0011 123456667899999999764 999999999999999876 899999999999999999997632 111
Q ss_pred ----ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHH--HHHHHHHH
Q 013019 342 ----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 415 (451)
Q Consensus 342 ----~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~--~Rl~~~~~ 415 (451)
.......|+++ ++|.+++.+ .+.|++++++++++.+...........++..+..++..|+.+. ...++..+
T Consensus 238 ~~~~~~~~~~pdi~~--~sK~lg~gg-~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~ 314 (396)
T PRK04073 238 LFACDWDNVTPDMYI--LGKALGGGV-FPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLE 314 (396)
T ss_pred HHHhhhcCCCCCEEE--ecccccCCC-CcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 11222356665 789998764 4578899999988877543222222346666666666665442 12344555
Q ss_pred HHHHHHHHHHcC
Q 013019 416 TALRMAEILEAH 427 (451)
Q Consensus 416 nA~~Lae~L~~~ 427 (451)
..+.+.+.|++.
T Consensus 315 ~~~~l~~~L~~l 326 (396)
T PRK04073 315 LGEYFKEQLKEI 326 (396)
T ss_pred HHHHHHHHHHhh
Confidence 677777777654
No 227
>PLN03032 serine decarboxylase; Provisional
Probab=99.70 E-value=1.4e-15 Score=156.90 Aligned_cols=221 Identities=17% Similarity=0.144 Sum_probs=160.5
Q ss_pred CccccCCCchhHHHHHHHHHhhhCCC--c--EEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcchHHHHHHhhhcCC
Q 013019 201 SFEYGRYGNPTTVVVEEKMSALEGAE--S--TVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (451)
Q Consensus 201 ~~~Y~R~~npt~~~Lee~LA~l~gae--~--~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t~~~l~~~l~~~G 274 (451)
.+.|++......+++.+++++++|.+ + .+++++|++|+..++.+.. .++++|+++...|.+..... +.+|
T Consensus 57 ~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa----~~lg 132 (374)
T PLN03032 57 ESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYR 132 (374)
T ss_pred cCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHH----HHcC
Confidence 34566655666777889999999963 3 4788888999988877653 24568999999998876443 3344
Q ss_pred cEEEEeC-----CCCHHHHHHhhcCC--CeEEEEEeCCCCCccccccHHHHHHHHHhcC-----CEEEEecCCCCCCcc-
Q 013019 275 ITATVID-----PADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-----AIVCIDGTFATPLNQ- 341 (451)
Q Consensus 275 i~v~~vd-----~~D~d~Le~ai~~~--~tklV~lesPsNPtG~v~DL~~IaelA~~~g-----~~lVVD~tfa~~~~~- 341 (451)
+.++.++ ..|+++|+++|+++ ++.+|++...+|++|.+.|+++|+++|+++| +++++|.+++.+...
T Consensus 133 ~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~ 212 (374)
T PLN03032 133 MEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPF 212 (374)
T ss_pred CCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhc
Confidence 4444443 24899999999763 3678888889999999999999999999996 589999998653211
Q ss_pred --c----cccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHh--------hCCC--ccHHHHHHHHH--hh
Q 013019 342 --K----ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------LGGA--LNPNAAYLIIR--GM 403 (451)
Q Consensus 342 --~----pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--------~G~~--ls~~~a~l~lr--gL 403 (451)
. .+..++|.+..|.||+++.+- ..|+++.++++++.+.....+ .|.. ......|+.++ |.
T Consensus 213 ~~~~~~~~~~~~vDSis~s~HK~~g~P~--g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~ 290 (374)
T PLN03032 213 VSRAPEVTFRKPIGSVSVSGHKFLGCPM--PCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGY 290 (374)
T ss_pred cCCCcccCCCcCCcEEEECcccccCCCc--CeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCH
Confidence 0 123479999999999998453 378888877666554321111 2222 23456676654 56
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 404 KTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 404 ~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+.+..++++..++++++.+.|+++
T Consensus 291 ~g~~~~~~~~~~~a~~l~~~l~~~ 314 (374)
T PLN03032 291 RGIKRDVQHCMRNAHYLKDRLTEA 314 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 778889999999999999999886
No 228
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=2e-15 Score=156.37 Aligned_cols=224 Identities=16% Similarity=0.182 Sum_probs=153.6
Q ss_pred ccCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHccCC-CeEEEcCCCCcchHHHHHHh---------h
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETV---------L 270 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all~~G-D~VIv~~~~Y~~t~~~l~~~---------l 270 (451)
..+|.++...+|+++|+++.+. +..++++||++|+..++..+..+| ++|+..++.|.+........ +
T Consensus 79 ~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 158 (398)
T PRK03244 79 SNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPF 158 (398)
T ss_pred cCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCC
Confidence 3567788888999999999874 467778899999999998776676 46777777787642211111 1
Q ss_pred hcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCC-Cc-----
Q 013019 271 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LN----- 340 (451)
Q Consensus 271 ~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~-~~----- 340 (451)
...+.++..++..|++++++++++ ++++|++|.++||+|.+.+ +++|.++|++||+++|+||++... ..
T Consensus 159 ~~~~~~~~~~~~~d~~~l~~~~~~-~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~ 237 (398)
T PRK03244 159 EPLPGGVEHVPYGDVDALAAAVDD-DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFA 237 (398)
T ss_pred CCCCCCceEeCCCCHHHHHHhhcC-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHh
Confidence 112234455666689999999865 4999999999999999987 899999999999999999997531 11
Q ss_pred cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHH--HHHHHHHHHHH
Q 013019 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTAL 418 (451)
Q Consensus 341 ~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~--~Rl~~~~~nA~ 418 (451)
........|++ +++|.+++ | ...|++++++++++.+...........++..+..++..|+.+. ...++..+..+
T Consensus 238 ~~~~~~~pDi~--t~sK~l~~-G-~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~ 313 (398)
T PRK03244 238 HQHDGVTPDVV--TLAKGLGG-G-LPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGE 313 (398)
T ss_pred hhhhCCCCCEE--EEchhhhC-C-cccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 11112235765 57899984 3 4678888888887776543222222346666666555555433 23455556667
Q ss_pred HHHHHHHc--CCCeEE
Q 013019 419 RMAEILEA--HPKVLL 432 (451)
Q Consensus 419 ~Lae~L~~--~p~V~~ 432 (451)
.+.+.|++ +|.+..
T Consensus 314 ~l~~~L~~~~~~~~~~ 329 (398)
T PRK03244 314 QLRAGIEALGHPLVDH 329 (398)
T ss_pred HHHHHHHhcCCCceee
Confidence 77788876 444433
No 229
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.70 E-value=1.5e-15 Score=160.52 Aligned_cols=216 Identities=19% Similarity=0.146 Sum_probs=143.6
Q ss_pred CchhHHHHH----HHHHhhhCCCc-EE----EeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhh------hc
Q 013019 208 GNPTTVVVE----EKMSALEGAES-TV----IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVL------PK 272 (451)
Q Consensus 208 ~npt~~~Le----e~LA~l~gae~-~v----v~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l------~~ 272 (451)
|....+.+| +++++++|++. .+ .++||++|+.+++.+++++||+|++.+..|++......... ..
T Consensus 74 g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~ 153 (452)
T PTZ00094 74 GNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATS 153 (452)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccce
Confidence 334445555 58999999742 22 23689999999999999999999999999988543221110 01
Q ss_pred CCcEEEEeC-----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-----cc
Q 013019 273 MGITATVID-----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QK 342 (451)
Q Consensus 273 ~Gi~v~~vd-----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-----~~ 342 (451)
.++++..+. ..|+++|++++++.++++|++. .+.+|...|+++|.++||++|+++++|++++.+.. ..
T Consensus 154 ~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~ 231 (452)
T PTZ00094 154 IYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPS 231 (452)
T ss_pred eeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCC
Confidence 112333322 2389999999965347787763 34599999999999999999999999999876543 23
Q ss_pred cccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh-----HhhCCCccHHHHHHHHHhhHHH-----HHHHHH
Q 013019 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGALNPNAAYLIIRGMKTL-----HLRVQQ 412 (451)
Q Consensus 343 pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-----~~~G~~ls~~~a~l~lrgL~tl-----~~Rl~~ 412 (451)
++. |+|+++.|++|++.|+. ||+++.++++.+.+.... ..+.+..++.....+..+++.+ ....++
T Consensus 232 ~~~-~~D~l~~S~hK~l~GP~---Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~ 307 (452)
T PTZ00094 232 PFP-YADVVTTTTHKSLRGPR---SGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQ 307 (452)
T ss_pred CCC-CCcEEEcCCccCCCCCC---ceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHH
Confidence 433 79999999999998885 677777665544332211 1111233333333333444443 234566
Q ss_pred HHHHHHHHHHHHHcCCCe
Q 013019 413 QNSTALRMAEILEAHPKV 430 (451)
Q Consensus 413 ~~~nA~~Lae~L~~~p~V 430 (451)
..++++.+.+.|.+. ++
T Consensus 308 i~~l~~~l~~~L~~~-g~ 324 (452)
T PTZ00094 308 VLKNAKALAAALEKR-GY 324 (452)
T ss_pred HHHHHHHHHHHHHhC-Cc
Confidence 778899999999775 44
No 230
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.70 E-value=1.4e-15 Score=161.95 Aligned_cols=211 Identities=15% Similarity=0.189 Sum_probs=146.3
Q ss_pred hHHHHHHHHHhhhCCCcEEEe-CCHHHHHHHH---HH-HHccCCC----eEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 211 TTVVVEEKMSALEGAESTVIM-ASGMSASTVM---LL-ALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 211 t~~~Lee~LA~l~gae~~vv~-sSG~aAi~~a---l~-all~~GD----~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
...++++++++++|.+.+.++ ++|+.+.... +. .++++|| +|+++++.|+.+... +...|+++..++
T Consensus 114 l~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~----~~~~G~~vv~v~ 189 (481)
T PRK04366 114 LMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPAS----AAMAGFKVVEIP 189 (481)
T ss_pred HHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHH----HHHcCCEEEEee
Confidence 356678999999998665554 5666444332 22 3456776 999999999876643 455788887765
Q ss_pred C-----CCHHHHHHhhcCCCeEEEEEeCCCCCcccc-ccHHHHHHHHHhcCCEEEEecCCCCC-C-ccccccCCCcEEEE
Q 013019 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATP-L-NQKALSLGADLVLH 353 (451)
Q Consensus 282 ~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v-~DL~~IaelA~~~g~~lVVD~tfa~~-~-~~~pl~~GaDiVv~ 353 (451)
. .|+++|+++++++ +++|++++|+ |+|.+ .|+++|+++||++|+++++|+++... + ...+.++|+|+++.
T Consensus 190 ~~~~~~~D~e~L~~~i~~~-t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~ 267 (481)
T PRK04366 190 SNEDGLVDLEALKAAVGED-TAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVHL 267 (481)
T ss_pred cCCCCCcCHHHHHhhcccC-CeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEEE
Confidence 3 4789999999874 9999999998 99977 48999999999999999999997532 1 13677889999999
Q ss_pred CCcccCCccc---cceeEEEEeCHHHHHHHHHH----------------------hHhhCCCccHHHHH--HHHHhhHHH
Q 013019 354 SATKFIGGHN---DVLAGSISGSGKLVTQIRNL----------------------HHVLGGALNPNAAY--LIIRGMKTL 406 (451)
Q Consensus 354 S~SK~l~G~g---dv~gG~Iv~~~eli~~lr~~----------------------~~~~G~~ls~~~a~--l~lrgL~tl 406 (451)
|.+|+++++- .-.+|+++.++++.+++... +...+..+....+| +...|.+.+
T Consensus 268 ~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl 347 (481)
T PRK04366 268 NLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGL 347 (481)
T ss_pred echhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHH
Confidence 9999987542 12367888888776655210 00000001112222 333345555
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 013019 407 HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 407 ~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
....+++.++++.+++.|++.
T Consensus 348 ~~~a~~~~~~a~~l~~~L~~~ 368 (481)
T PRK04366 348 REVSEDAVLNANYLKARLKDI 368 (481)
T ss_pred HHHHHHHHHHHHHHHHHhHhh
Confidence 555677788899999999876
No 231
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.70 E-value=2e-15 Score=154.69 Aligned_cols=218 Identities=16% Similarity=0.140 Sum_probs=148.0
Q ss_pred cCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc---c----CCCeEEEcCCCCcchHHHHHHh-h------
Q 013019 205 GRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---P----AGGHIVTTTDCYRKTRIFIETV-L------ 270 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all---~----~GD~VIv~~~~Y~~t~~~l~~~-l------ 270 (451)
.+|.++...+|+++|++++|.+++++++||++|+..++..+. . +||+|++.++.|.+........ .
T Consensus 64 ~~~~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~ 143 (379)
T TIGR00707 64 NLYYTEPQEELAEKLVEHSGADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQK 143 (379)
T ss_pred cccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhc
Confidence 456788999999999999999999999999999998887552 2 3799999999997643222111 0
Q ss_pred --hcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccc-c---cHHHHHHHHHhcCCEEEEecCCCCC-Cccc-
Q 013019 271 --PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC-V---DVKLVSDLCHKKGAIVCIDGTFATP-LNQK- 342 (451)
Q Consensus 271 --~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v-~---DL~~IaelA~~~g~~lVVD~tfa~~-~~~~- 342 (451)
.....++.+++..|++++++.++++ +++|+++.++|++|.. . ++++|.++|+++|+++|+||++... ....
T Consensus 144 ~~~~~~~~~~~~~~~d~~~l~~~~~~~-~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~ 222 (379)
T TIGR00707 144 GFEPLVPGFSYAPYNDIESLKKAIDDE-TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF 222 (379)
T ss_pred cCCCCCCCceeeCCCCHHHHHHHhhhC-eeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh
Confidence 0111233444555899999999774 8999998776666653 3 4899999999999999999998632 1111
Q ss_pred -c---ccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHH--HHHHHHHHH
Q 013019 343 -A---LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST 416 (451)
Q Consensus 343 -p---l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~--~Rl~~~~~n 416 (451)
+ .....|++ +++|.++ .| .+.|++++++++++.++..........++..+..+...|+.+. ...++..++
T Consensus 223 ~~~~~~~~~~d~~--t~sK~~~-~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~ 298 (379)
T TIGR00707 223 FAYEHYGIEPDII--TLAKGLG-GG-VPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEK 298 (379)
T ss_pred hhHHhcCCCCCEE--EEccccc-CC-cccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 1 11224554 6899999 44 5689999999988887753322222345666555554444332 234555566
Q ss_pred HHHHHHHHHcC
Q 013019 417 ALRMAEILEAH 427 (451)
Q Consensus 417 A~~Lae~L~~~ 427 (451)
.+.+.+.|++.
T Consensus 299 ~~~~~~~l~~~ 309 (379)
T TIGR00707 299 GDYFKERLEEL 309 (379)
T ss_pred HHHHHHHHHHH
Confidence 66676666543
No 232
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.70 E-value=3.4e-15 Score=155.70 Aligned_cols=217 Identities=18% Similarity=0.214 Sum_probs=154.8
Q ss_pred CccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 201 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 201 ~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
+..|+ ++|+..+||+.+++++|.+.++.++||++|+..+....+++||.| +.+.|..+.... ....|....-+
T Consensus 64 De~ya--g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ah---Ie~~Gav~vDi 136 (450)
T TIGR02618 64 DEAYA--GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYH---QEKNGATFVDI 136 (450)
T ss_pred chhhc--CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHH---HHhCCeEEEee
Confidence 34576 889999999999999999999999999999887776778999977 556675544321 12233321111
Q ss_pred --C-------------CCCHHHHHHhhcCC---CeEEEEEeCCCCCc-ccc---ccHHHHHHHHHhcCCEEEEecCCCC-
Q 013019 281 --D-------------PADMEGLEAALNNN---NVSLFFTESPTNPF-LRC---VDVKLVSDLCHKKGAIVCIDGTFAT- 337 (451)
Q Consensus 281 --d-------------~~D~d~Le~ai~~~---~tklV~lesPsNPt-G~v---~DL~~IaelA~~~g~~lVVD~tfa~- 337 (451)
| ..|+++|+++|+++ ++++|.+++++|.. |.+ .++++|.++|++||++||.|.+...
T Consensus 137 ~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~g 216 (450)
T TIGR02618 137 IIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVE 216 (450)
T ss_pred ecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhh
Confidence 1 12799999999863 35688899999966 777 4689999999999999999998432
Q ss_pred -C---------Cccccc-------cCCCcEEEECCcccCCccccceeEEEE-eCHHHHHHHHHHhHhhCC-----CccHH
Q 013019 338 -P---------LNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGG-----ALNPN 394 (451)
Q Consensus 338 -~---------~~~~pl-------~~GaDiVv~S~SK~l~G~gdv~gG~Iv-~~~eli~~lr~~~~~~G~-----~ls~~ 394 (451)
. +...++ -.++|.++.|+.|..+++ +||+|+ .+++++++++.+...+++ .++..
T Consensus 217 NA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~---~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r 293 (450)
T TIGR02618 217 NAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVN---IGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGR 293 (450)
T ss_pred ChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCC---CceEEEeCCHHHHHHHHHHhhhcCCccccCchhhh
Confidence 1 222222 225899999999999888 488888 677899999988766533 23333
Q ss_pred HHHHHHHhhHHHHHH--HHHHHHHHHHHHHHHHcC
Q 013019 395 AAYLIIRGMKTLHLR--VQQQNSTALRMAEILEAH 427 (451)
Q Consensus 395 ~a~l~lrgL~tl~~R--l~~~~~nA~~Lae~L~~~ 427 (451)
+...+..+|+..-.+ .+....+++.|++.|.+.
T Consensus 294 ~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~ 328 (450)
T TIGR02618 294 DMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA 328 (450)
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC
Confidence 323334455553332 344456799999999887
No 233
>PRK02769 histidine decarboxylase; Provisional
Probab=99.69 E-value=3.2e-15 Score=154.70 Aligned_cols=231 Identities=17% Similarity=0.135 Sum_probs=157.6
Q ss_pred cccCCCchhHHHHHHHHHhhhCCC--c--EEEeCCHHHHHHHHHHHH--ccCCCeEEEcCCCCcchHHHHHHhhhcCCcE
Q 013019 203 EYGRYGNPTTVVVEEKMSALEGAE--S--TVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (451)
Q Consensus 203 ~Y~R~~npt~~~Lee~LA~l~gae--~--~vv~sSG~aAi~~al~al--l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~ 276 (451)
.|++......+++.+++++++|.+ + .+++++|++++..++.+. ..++++|++++..|.+....++ .+...+..
T Consensus 58 ~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~-~lg~~~~~ 136 (380)
T PRK02769 58 NYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIAR-LLRIKSRV 136 (380)
T ss_pred CCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHH-HcCCCCce
Confidence 344433344556778889999963 3 466777789887776544 3568899999999998765442 22222222
Q ss_pred EEEeC--CCCHHHHHHhhcCC--CeEEEEEeCCCCCccccccHHHHHHHHHhcC---CEEEEecCCCCCCcc---c--cc
Q 013019 277 ATVID--PADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKG---AIVCIDGTFATPLNQ---K--AL 344 (451)
Q Consensus 277 v~~vd--~~D~d~Le~ai~~~--~tklV~lesPsNPtG~v~DL~~IaelA~~~g---~~lVVD~tfa~~~~~---~--pl 344 (451)
+...+ ..|+++|+++++++ +|.+|++..++|++|.+.|+++|+++|+++| +++++|.+++.+... . ++
T Consensus 137 V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~ 216 (380)
T PRK02769 137 ITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPF 216 (380)
T ss_pred eccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccC
Confidence 32222 24899999999763 3889999999999999999999999999998 699999998764321 1 12
Q ss_pred --cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH--------hhCCC--ccHHHHHHHHHh--hHHHHHHH
Q 013019 345 --SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------VLGGA--LNPNAAYLIIRG--MKTLHLRV 410 (451)
Q Consensus 345 --~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--------~~G~~--ls~~~a~l~lrg--L~tl~~Rl 410 (451)
..|+|.+..|.||+++++. ..|+++.+++.++++..... ..|+. ......|..++. .+.+..+.
T Consensus 217 d~~~~vDsis~s~HK~~~~P~--g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~ 294 (380)
T PRK02769 217 SFADGIDSIAISGHKFIGSPM--PCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRV 294 (380)
T ss_pred CccCCCCEEEECCcccCCCCC--CcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHH
Confidence 2389999999999998664 37888887776665432111 12222 133455655543 34566677
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEecCC
Q 013019 411 QQQNSTALRMAEILEAHPKVLLLFITL 437 (451)
Q Consensus 411 ~~~~~nA~~Lae~L~~~p~V~~V~yPg 437 (451)
++..+.++++.+.|++. +++.+..|.
T Consensus 295 ~~~~~la~~l~~~L~~~-g~~~~~~p~ 320 (380)
T PRK02769 295 QHCLDMAQYAVDRLQAN-GIPAWRNPN 320 (380)
T ss_pred HHHHHHHHHHHHHHHhC-CCEEEcCCC
Confidence 88889999999999874 555554443
No 234
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.69 E-value=5.1e-16 Score=161.07 Aligned_cols=211 Identities=21% Similarity=0.309 Sum_probs=144.4
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
+.....+.|+.+|+++|++.+.+..+|+ .+|.+++++++++||+|++++++|-+.+..+ ...|+...++++
T Consensus 64 p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~al----il~ga~Pvyi~p~~~~ 139 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNAL----ILSGAIPVYIPPEDNE 139 (417)
T ss_dssp TBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHH----HHHTEEEEEEEEEE-T
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHH----HHcCCeEEEecCCccc
Confidence 4445778999999999999999999999 8999999999999999999999999877533 334666666542
Q ss_pred ------CCH-----HHHHHhhcCC-C---eEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-----cc
Q 013019 283 ------ADM-----EGLEAALNNN-N---VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QK 342 (451)
Q Consensus 283 ------~D~-----d~Le~ai~~~-~---tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-----~~ 342 (451)
.++ +.|+++|+++ . .++|++.+|+ ..|.+.|+++|+++||++|++|+|||+++.-+. ..
T Consensus 140 ~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~ 218 (417)
T PF01276_consen 140 YGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPT-YYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRS 218 (417)
T ss_dssp TS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTT
T ss_pred cCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCC-CCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccc
Confidence 134 8898888753 2 3459998887 789999999999999999999999999876432 23
Q ss_pred cccCCCc-------EEEECCcccCCccccceeEEEEeCHHH---HHHHHHHhHhhCCCccHHH--HH--HHHHhh-HH-H
Q 013019 343 ALSLGAD-------LVLHSATKFIGGHNDVLAGSISGSGKL---VTQIRNLHHVLGGALNPNA--AY--LIIRGM-KT-L 406 (451)
Q Consensus 343 pl~~GaD-------iVv~S~SK~l~G~gdv~gG~Iv~~~el---i~~lr~~~~~~G~~ls~~~--a~--l~lrgL-~t-l 406 (451)
.+.+|+| ++++|+||.+++.. .+.++-.+.+. .++++.....+..+.+... +. .+.+.+ .. =
T Consensus 219 a~~~gad~~~~~~~~vvqS~HKtL~alt--Qts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G 296 (417)
T PF01276_consen 219 ALALGADRPNDPGIIVVQSTHKTLPALT--QTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEG 296 (417)
T ss_dssp CSSTTSS-CTSBEEEEEEEHHHHSSS-T--T-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHH
T ss_pred hhhccCccccccceeeeechhhcccccc--cceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhh
Confidence 4567999 99999999999876 56777665442 4667666555544322211 11 111122 11 1
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 013019 407 HLRVQQQNSTALRMAEILE 425 (451)
Q Consensus 407 ~~Rl~~~~~nA~~Lae~L~ 425 (451)
...+++..++++.+.+.|+
T Consensus 297 ~~l~~~~i~~a~~~R~~i~ 315 (417)
T PF01276_consen 297 RELLEEAIELAEEFRKKIN 315 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 1234566667777777773
No 235
>PRK08637 hypothetical protein; Provisional
Probab=99.67 E-value=2e-14 Score=148.60 Aligned_cols=176 Identities=14% Similarity=0.155 Sum_probs=117.3
Q ss_pred CccccCCCchhHHHHHHHHHhhhC-----C--C--cEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhh
Q 013019 201 SFEYGRYGNPTTVVVEEKMSALEG-----A--E--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVL 270 (451)
Q Consensus 201 ~~~Y~R~~npt~~~Lee~LA~l~g-----a--e--~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l 270 (451)
.+.|+.. .....|++.+++... . + +.+++++|. +++..++.+++++||+|++++|+|+.....+.
T Consensus 37 ~~~Y~~~--~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~--- 111 (388)
T PRK08637 37 IFPYAPP--QGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFN--- 111 (388)
T ss_pred ccCCCCC--CCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHH---
Confidence 3455532 224556666665431 1 2 235556655 89999999999999999999999987654332
Q ss_pred hcCCcEEEEeCC------CCHHHHHHhhc---CCCeEEEEEeCCCCCcccccc---HHHHHHHHHh-----cCCEEEEec
Q 013019 271 PKMGITATVIDP------ADMEGLEAALN---NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK-----KGAIVCIDG 333 (451)
Q Consensus 271 ~~~Gi~v~~vd~------~D~d~Le~ai~---~~~tklV~lesPsNPtG~v~D---L~~IaelA~~-----~g~~lVVD~ 333 (451)
...|.++..++. .|+++++++++ ++..+++++++|+||||.+++ +++|+++|++ ++++||+|+
T Consensus 112 ~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De 191 (388)
T PRK08637 112 TRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDD 191 (388)
T ss_pred HhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecc
Confidence 124666655432 36889988876 223567889999999999986 5667776664 899999999
Q ss_pred CCCCCCcc----cc-c----cC-CCc--EEEECCcccCCccccceeEEEEe------CHHHHHHHHH
Q 013019 334 TFATPLNQ----KA-L----SL-GAD--LVLHSATKFIGGHNDVLAGSISG------SGKLVTQIRN 382 (451)
Q Consensus 334 tfa~~~~~----~p-l----~~-GaD--iVv~S~SK~l~G~gdv~gG~Iv~------~~eli~~lr~ 382 (451)
+|...... .+ + +. +-. +.+.|+||.++.+| ++.||++. ++++++++..
T Consensus 192 ~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pG-lRlG~~~~~~~~~~~~~l~~~~~~ 257 (388)
T PRK08637 192 AYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWG-FRVGFITFGTKAGSSQTVKEALEK 257 (388)
T ss_pred cchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcc-cceEEEEEccccCCcHHHHHHHHH
Confidence 98643211 11 1 11 111 23459999888777 67888874 3677777654
No 236
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.67 E-value=1e-14 Score=151.01 Aligned_cols=215 Identities=19% Similarity=0.182 Sum_probs=146.3
Q ss_pred CchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcchHHHHHHhhh---------cCC
Q 013019 208 GNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP---------KMG 274 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t~~~l~~~l~---------~~G 274 (451)
.++...+|+++|+++.+ .+.+++++||++|+..++..+. .++|+|++.++.|.+.......... ...
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLL 156 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCC
Confidence 35778899999999998 6788889999999999998764 5689999999988874432211111 112
Q ss_pred cEEEEeCCC-----------CHHHHHHhhcC--CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCC
Q 013019 275 ITATVIDPA-----------DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT 337 (451)
Q Consensus 275 i~v~~vd~~-----------D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~ 337 (451)
.++..++.. |+++|++++++ +++++|+++..+|++|.+.+ +++|.++|+++|+++|+||++..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g 236 (413)
T cd00610 157 PGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTG 236 (413)
T ss_pred CCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 234445554 78899998875 35788898877778898877 99999999999999999999763
Q ss_pred C-Ccc-----ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHH--HHHhHhhCCCccHHHHHHHHHhhHHHH--
Q 013019 338 P-LNQ-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI--RNLHHVLGGALNPNAAYLIIRGMKTLH-- 407 (451)
Q Consensus 338 ~-~~~-----~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~l--r~~~~~~G~~ls~~~a~l~lrgL~tl~-- 407 (451)
. ... .......|++ |++|.+++ + .+.|++++++++++.+ ...........++..+..+...++.+.
T Consensus 237 ~g~~g~~~~~~~~~~~~d~~--t~sK~l~~-g-~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~ 312 (413)
T cd00610 237 FGRTGKMFAFEHFGVEPDIV--TLGKGLGG-G-LPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEE 312 (413)
T ss_pred CCcCcchhhHhhcCCCCCeE--EEcccccC-c-cccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 2 111 1112224554 67899997 4 5678888999888886 222211122345555555444454433
Q ss_pred HHHHHHHHHHHHHHHHHHc
Q 013019 408 LRVQQQNSTALRMAEILEA 426 (451)
Q Consensus 408 ~Rl~~~~~nA~~Lae~L~~ 426 (451)
...++..++.+.+.+.|++
T Consensus 313 ~~~~~~~~~~~~l~~~l~~ 331 (413)
T cd00610 313 GLLENAAELGEYLRERLRE 331 (413)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 2345555666666666654
No 237
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.67 E-value=5e-15 Score=152.77 Aligned_cols=216 Identities=17% Similarity=0.188 Sum_probs=146.1
Q ss_pred ccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCC-------CeEEEcCCCCcchHHHHHHhhh-----
Q 013019 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAG-------GHIVTTTDCYRKTRIFIETVLP----- 271 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~G-------D~VIv~~~~Y~~t~~~l~~~l~----- 271 (451)
...|.+|...+|+++|+++.+.+.++++++|++|+..++..++..+ ++|++.++.|.+........-.
T Consensus 75 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 154 (396)
T PRK02627 75 SNLYYIEPQEELAEKLVELSGMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQ 154 (396)
T ss_pred ccccCCHHHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCcccc
Confidence 3456789999999999999988889999999999999998776544 6799999888764322111100
Q ss_pred ----cCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcc-ccc---cHHHHHHHHHhcCCEEEEecCCCCC-Cccc
Q 013019 272 ----KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL-RCV---DVKLVSDLCHKKGAIVCIDGTFATP-LNQK 342 (451)
Q Consensus 272 ----~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG-~v~---DL~~IaelA~~~g~~lVVD~tfa~~-~~~~ 342 (451)
.....+..++..|++++++++.+ ++++|++|.++||+| .+. .+++|.++|++||+++|+||+|... ....
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~ 233 (396)
T PRK02627 155 EGFEPLVEGFIYVPFNDIEALKAAITD-KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK 233 (396)
T ss_pred ccCCCCCCCceEeCCCCHHHHHHhcCC-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc
Confidence 00112233455689999999976 499999999999998 344 3899999999999999999997632 1111
Q ss_pred --cc-cCC--CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHH--HHHHHHH
Q 013019 343 --AL-SLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNS 415 (451)
Q Consensus 343 --pl-~~G--aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~--Rl~~~~~ 415 (451)
+. ..| .|++ +++|.+++ | .+.|++++++++++.+...........++..+..+...|+.+.. .+++..+
T Consensus 234 ~~~~~~~~~~pdi~--t~sK~~~~-G-~rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~ 309 (396)
T PRK02627 234 LFAYQHYGIEPDIM--TLAKGLGG-G-VPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAE 309 (396)
T ss_pred eeeehhcCCCCCEE--EEcchhhC-C-cccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 11 123 3544 68999984 4 57889999998887775432222334567776666666654432 2334444
Q ss_pred HHHHHHHHH
Q 013019 416 TALRMAEIL 424 (451)
Q Consensus 416 nA~~Lae~L 424 (451)
+.+.+.+.|
T Consensus 310 ~~~~~~~~l 318 (396)
T PRK02627 310 VGEYLRAKL 318 (396)
T ss_pred HHHHHHHHH
Confidence 444444444
No 238
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.67 E-value=2e-14 Score=152.84 Aligned_cols=218 Identities=17% Similarity=0.093 Sum_probs=143.3
Q ss_pred CchhHHHHHH----HHHhhhCCC-cEEEe----CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHH--HHHh--hhcCC
Q 013019 208 GNPTTVVVEE----KMSALEGAE-STVIM----ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIF--IETV--LPKMG 274 (451)
Q Consensus 208 ~npt~~~Lee----~LA~l~gae-~~vv~----sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~--l~~~--l~~~G 274 (451)
|+...+++|+ ...++++.+ ..+++ .||+.|+..++.+++++||+|+..+...++.... .... +...+
T Consensus 74 G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~ 153 (475)
T PLN03226 74 GNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATS 153 (475)
T ss_pred CChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccce
Confidence 5667777776 445566654 44544 8999999999999999999999976544443221 1111 11112
Q ss_pred cEEEE--e--C----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-----c
Q 013019 275 ITATV--I--D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----Q 341 (451)
Q Consensus 275 i~v~~--v--d----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-----~ 341 (451)
..+.. + + ..|+++|++++.+.++++|++. -++ ++...|+++|.++|+++|+++++|+++..++. .
T Consensus 154 ~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~-~S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~ 231 (475)
T PLN03226 154 IYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG-ASA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAA 231 (475)
T ss_pred EEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe-cCc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCC
Confidence 21111 1 1 2389999998875457877662 333 78889999999999999999999998766532 2
Q ss_pred ccccCCCcEEEECCcccCCccccceeEEEEeCHHHH-----------H---HHHHHh-HhhCCCccHHHHHHHHHhhHHH
Q 013019 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLV-----------T---QIRNLH-HVLGGALNPNAAYLIIRGMKTL 406 (451)
Q Consensus 342 ~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli-----------~---~lr~~~-~~~G~~ls~~~a~l~lrgL~tl 406 (451)
.|++ ++|+++.|++|+|.|+. ||+|+++++++ + .+.... ..+.+.+++...+.+..+++.+
T Consensus 232 ~p~~-~~Div~~t~hK~L~GP~---Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i 307 (475)
T PLN03226 232 SPFE-YCDVVTTTTHKSLRGPR---GGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA 307 (475)
T ss_pred CCCC-CCeEEEecCcccccCCC---ceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH
Confidence 3443 69999999999998885 78888887543 1 121111 1122334444444444444443
Q ss_pred -----HHHHHHHHHHHHHHHHHHHcCCCeEE
Q 013019 407 -----HLRVQQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 407 -----~~Rl~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
....++..+|++.|++.|.+ .++.-
T Consensus 308 ~~~~~~~~~~~~~~na~~L~~~L~~-~G~~l 337 (475)
T PLN03226 308 MTPEFKAYQKQVKANAAALANRLMS-KGYKL 337 (475)
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHHh-CCCEE
Confidence 33577888999999999988 45543
No 239
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.66 E-value=7.8e-15 Score=151.56 Aligned_cols=214 Identities=18% Similarity=0.149 Sum_probs=145.0
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH----ccCCC----eEEEcCCCCcchHHHHHHhh--hc----
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL----VPAGG----HIVTTTDCYRKTRIFIETVL--PK---- 272 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al----l~~GD----~VIv~~~~Y~~t~~~l~~~l--~~---- 272 (451)
+.+|...+|+++|+++.+.+.+++++||++|+..++.++ ..+|| +||+.++.|.+........- ..
T Consensus 70 ~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 149 (389)
T PRK01278 70 YRIPEQERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEG 149 (389)
T ss_pred cCChHHHHHHHHHHhhCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhccc
Confidence 457888899999999987788999999999999998776 45676 89999999887532221110 00
Q ss_pred C---CcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccc----cHHHHHHHHHhcCCEEEEecCCCCC-Cccccc
Q 013019 273 M---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATP-LNQKAL 344 (451)
Q Consensus 273 ~---Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~----DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl 344 (451)
+ .-.+..++..|++++++++++ ++++|++|.++|++|... ++++|.++|++||+++|+||++... .....+
T Consensus 150 ~~~~~~~~~~~~~~d~~~l~~~l~~-~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~ 228 (389)
T PRK01278 150 FGPLVPGFDQVPFGDIEALKAAITP-NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF 228 (389)
T ss_pred CCCCCCCceEeCCCCHHHHHHhhCC-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce
Confidence 0 011233455689999999987 499999998888888433 5899999999999999999997632 111111
Q ss_pred ---cCC--CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHH--HHHHHHHHH
Q 013019 345 ---SLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTA 417 (451)
Q Consensus 345 ---~~G--aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~--Rl~~~~~nA 417 (451)
..| .|+ .+++|.+++ | .+.|++++++++++.+...........++..+..++..|+.+.. ..++..++.
T Consensus 229 ~~~~~~~~pdi--~t~sK~l~~-G-~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~ 304 (389)
T PRK01278 229 AHEWAGVTPDI--MAVAKGIGG-G-FPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMG 304 (389)
T ss_pred eecccCCCCCE--EEEehhccC-C-cceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 123 354 478999984 3 46888899988877765443333334567777766666655421 234444445
Q ss_pred HHHHHHHH
Q 013019 418 LRMAEILE 425 (451)
Q Consensus 418 ~~Lae~L~ 425 (451)
+.+.+.|+
T Consensus 305 ~~l~~~l~ 312 (389)
T PRK01278 305 LYLKQKLE 312 (389)
T ss_pred HHHHHHHH
Confidence 55555443
No 240
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.65 E-value=2.3e-14 Score=148.26 Aligned_cols=216 Identities=19% Similarity=0.165 Sum_probs=143.8
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc----------CCCeEEEcCCCCcchH-HHHHHhhh-----
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP----------AGGHIVTTTDCYRKTR-IFIETVLP----- 271 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~----------~GD~VIv~~~~Y~~t~-~~l~~~l~----- 271 (451)
.++....+++.++++.+.+.+++++||++|+..++..+.. .+++|++.+..|.+.. ..+...-.
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~ 150 (400)
T PTZ00125 71 YNDVLGLAEKYITDLFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYN 150 (400)
T ss_pred cCHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhc
Confidence 3567888999999998888999999999999999886641 3467888887776632 22211100
Q ss_pred ---cCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCC-Ccccc
Q 013019 272 ---KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LNQKA 343 (451)
Q Consensus 272 ---~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~-~~~~p 343 (451)
...-.+..++..|+++|+++++..++++|++|.++||+|.+.+ +++|.++|++||+++|+||++... .....
T Consensus 151 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~ 230 (400)
T PTZ00125 151 NFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKL 230 (400)
T ss_pred cCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh
Confidence 0011234456678999999996335999999999999999887 999999999999999999997431 11111
Q ss_pred -----ccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHH--HHHHHHHH
Q 013019 344 -----LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNST 416 (451)
Q Consensus 344 -----l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~--Rl~~~~~n 416 (451)
.....|+++ ++|.+++.. ...|++++++++++.+...........++..+..+...|+.+.. ..++..+.
T Consensus 231 ~~~~~~~~~pd~~~--~sK~l~~g~-~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~ 307 (400)
T PTZ00125 231 LAHDHEGVKPDIVL--LGKALSGGL-YPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRL 307 (400)
T ss_pred hHHHhcCCCCCEEE--EcccccCCC-cCcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 112247776 579998642 25788999999888876433222223456666655555554431 12333344
Q ss_pred HHHHHHHHHc
Q 013019 417 ALRMAEILEA 426 (451)
Q Consensus 417 A~~Lae~L~~ 426 (451)
.+.+.+.|++
T Consensus 308 ~~~l~~~l~~ 317 (400)
T PTZ00125 308 GEVFRDGLKE 317 (400)
T ss_pred HHHHHHHHHH
Confidence 4444454543
No 241
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.65 E-value=4.4e-14 Score=141.70 Aligned_cols=219 Identities=17% Similarity=0.174 Sum_probs=151.6
Q ss_pred ccccCCCchhHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcC
Q 013019 202 FEYGRYGNPTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~g--------ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~ 273 (451)
..|+ +.......++++|++.. +++.+++++..+||..++.+|.+||..|++++|.|.-.. ..+...
T Consensus 97 N~Ya--ps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~----~~a~~~ 170 (447)
T KOG0259|consen 97 NGYA--PSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYD----TRAIYS 170 (447)
T ss_pred CCcC--CccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHH----Hhhhhc
Confidence 3454 34555667788888742 244555444449999999999999999999999997533 334556
Q ss_pred CcEEEEeCC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-c
Q 013019 274 GITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-K 342 (451)
Q Consensus 274 Gi~v~~vd~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~-~ 342 (451)
|++++++|. .|++.+|+.++++ |.++++.+|+||+|.+++ |++|+++|+++|+++|.||.|...++. +
T Consensus 171 ~lEVR~ydlLPe~~weIDL~~veal~DEN-T~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~ 249 (447)
T KOG0259|consen 171 GLEVRYYDLLPEKDWEIDLDGVEALADEN-TVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDK 249 (447)
T ss_pred CceeEeecccCcccceechHHHHHhhccC-eeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCC
Confidence 899998874 3899999999885 999999999999999985 889999999999999999998654321 1
Q ss_pred c---c-cCC---CcEEEECCcccCCccccceeEEEEeC-H-------HHHHHHHHHhHhhCCCccHH--HHHHH----HH
Q 013019 343 A---L-SLG---ADLVLHSATKFIGGHNDVLAGSISGS-G-------KLVTQIRNLHHVLGGALNPN--AAYLI----IR 401 (451)
Q Consensus 343 p---l-~~G---aDiVv~S~SK~l~G~gdv~gG~Iv~~-~-------eli~~lr~~~~~~G~~ls~~--~a~l~----lr 401 (451)
| + .+. --+.+.+.+|-+--+|++ .||++.. + ..++.+.. .+.....|- .+..+ .+
T Consensus 250 pfvpmg~fssiVPVitlggisKrW~VPGWR-lGWi~~hD~~gvf~~~~~~q~~~~---~~~~~~~p~TiiQ~AlP~IL~k 325 (447)
T KOG0259|consen 250 PFVPMGKFSSIVPVITLGGISKRWIVPGWR-LGWIALHDPRGVFRDTKVVQGIKN---FLDIIPGPATIIQGALPDILEK 325 (447)
T ss_pred CccchhhccccCceEeecccccccccCCce-eeeEEEecccccccchHHHHHHHH---HHhccCCccHhHHHHhHHHHHh
Confidence 1 1 111 247788999988877765 5666543 2 22334443 333332221 11111 11
Q ss_pred hhHH-HHHHHHHHHHHHHHHHHHHHcCCCeE
Q 013019 402 GMKT-LHLRVQQQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 402 gL~t-l~~Rl~~~~~nA~~Lae~L~~~p~V~ 431 (451)
.-+. +..++.-...|+....++|++.|.+.
T Consensus 326 Tp~efF~k~~~~lk~na~l~y~~Lk~IP~l~ 356 (447)
T KOG0259|consen 326 TPEEFFDKKLSFLKSNADLCYSRLKDIPCLT 356 (447)
T ss_pred ChHHHHHHHHHHHHhhHHHHHHHHhcCCCcc
Confidence 1122 34456667789999999999999876
No 242
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.65 E-value=9.2e-15 Score=154.34 Aligned_cols=214 Identities=19% Similarity=0.168 Sum_probs=149.7
Q ss_pred CchhHHHH----HHHHHhhhCCCcEEE-eCCHHHHHHHHHHHHccC-------------------------------CCe
Q 013019 208 GNPTTVVV----EEKMSALEGAESTVI-MASGMSASTVMLLALVPA-------------------------------GGH 251 (451)
Q Consensus 208 ~npt~~~L----ee~LA~l~gae~~vv-~sSG~aAi~~al~all~~-------------------------------GD~ 251 (451)
|+...+.+ .++..+++|++.+-+ .-||+.|+.+++.++++| ||+
T Consensus 89 g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~ 168 (493)
T PRK13580 89 GCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQR 168 (493)
T ss_pred CCchHHHHHHHHHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCE
Confidence 45555554 455666889877655 459999999999999986 899
Q ss_pred EEEcCCCCcchHHHHHHhhhcCC--cEEEE--eC----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHH
Q 013019 252 IVTTTDCYRKTRIFIETVLPKMG--ITATV--ID----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH 323 (451)
Q Consensus 252 VIv~~~~Y~~t~~~l~~~l~~~G--i~v~~--vd----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~ 323 (451)
|+..+...|+....- ......+ ..+.. +| ..|.+++++.+++. +++|++...+|. +...|+++|.++|+
T Consensus 169 i~~l~l~~GGHlthg-~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~-~plvii~g~S~~-~~~~dl~~i~eia~ 245 (493)
T PRK13580 169 LLGMSLDSGGHLTHG-FRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREF-KPLILVAGYSAY-PRRVNFAKLREIAD 245 (493)
T ss_pred EEeecCCCCCeeecC-cccchhhheeeeEecccCcccCccCHHHHHHHHhhc-CCEEEEeCcccc-CCCcCHHHHHHHHH
Confidence 999988887742110 0000011 11111 12 24889999999876 666666677776 55889999999999
Q ss_pred hcCCEEEEecCCCCCCcc--------ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH-hhCCCccHH
Q 013019 324 KKGAIVCIDGTFATPLNQ--------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGALNPN 394 (451)
Q Consensus 324 ~~g~~lVVD~tfa~~~~~--------~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~-~~G~~ls~~ 394 (451)
++|+++++|++++.++.. .+. .++|+++.|++|++.|+. ||+|++++++++.+..... .+|+.+.+.
T Consensus 246 ~~gA~L~VD~AH~~Gligg~~~~~~~~~~-~~~D~vtgT~hKaL~GP~---GG~I~~~~~l~~~L~~a~P~i~gg~l~p~ 321 (493)
T PRK13580 246 EVGAVLMVDMAHFAGLVAGKVFTGDEDPV-PHADIVTTTTHKTLRGPR---GGLVLAKKEYADAVDKGCPLVLGGPLPHV 321 (493)
T ss_pred HcCCEEEEECchhhceeccccchhhcCCC-CCCcEEEeCChhhccCCC---eEEEEecHHHHHHHhhCCCcccCCCccHH
Confidence 999999999997665321 233 369999999999998774 8999999999888854432 345555565
Q ss_pred HHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHHcCC
Q 013019 395 AAYLIIRGMK----TLHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 395 ~a~l~lrgL~----tl~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
.+..+....+ ....+.++..+|++.|++.|.++.
T Consensus 322 iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G 359 (493)
T PRK13580 322 MAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRG 359 (493)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4443332222 123467888999999999998763
No 243
>PRK07505 hypothetical protein; Provisional
Probab=99.65 E-value=3.8e-14 Score=147.29 Aligned_cols=184 Identities=20% Similarity=0.196 Sum_probs=129.5
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc----cCCC-eEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV----PAGG-HIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all----~~GD-~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
+.++...+|+++|+++.+. +.++++||++|+..++..+. .+|+ .||+.+..|.++......... .+.++..++
T Consensus 88 ~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~v~~~~ 165 (402)
T PRK07505 88 VRSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DETEVETID 165 (402)
T ss_pred hhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCCeEEEeC
Confidence 4567788999999999998 88999999999887775432 2233 355666555554322222222 345777788
Q ss_pred CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC--------Ccccccc--C-CCcE
Q 013019 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--------LNQKALS--L-GADL 350 (451)
Q Consensus 282 ~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~--------~~~~pl~--~-GaDi 350 (451)
..|+++++++++++ ++++++..|+||+|.+.++++|.++|+++|++||+||+++.. +...... . ...+
T Consensus 166 ~~d~~~l~~~~~~~-~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i 244 (402)
T PRK07505 166 HNDLDALEDICKTN-KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTI 244 (402)
T ss_pred CCCHHHHHHHHhcC-CCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeE
Confidence 88999999998764 788888899999999999999999999999999999997421 1111111 1 1247
Q ss_pred EEECCcccCCccccceeEEEE-eCHHHHHHHHHHhHh--hCCCccHHHHH
Q 013019 351 VLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHV--LGGALNPNAAY 397 (451)
Q Consensus 351 Vv~S~SK~l~G~gdv~gG~Iv-~~~eli~~lr~~~~~--~G~~ls~~~a~ 397 (451)
++.|++|.+++. ||+++ .++++++.++..... ++..+++..+.
T Consensus 245 ~~~s~sK~~~~~----Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~a 290 (402)
T PRK07505 245 IAASLGKAFGAS----GGVIMLGDAEQIELILRYAGPLAFSQSLNVAALG 290 (402)
T ss_pred EEEechhhhhcc----CeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHH
Confidence 778999999876 47766 477888888764432 23344444433
No 244
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.65 E-value=1.5e-14 Score=150.50 Aligned_cols=159 Identities=18% Similarity=0.255 Sum_probs=116.5
Q ss_pred HHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCC---eEEEcCCCCcchHHHHHHhhhcCCcEE----EEeCC
Q 013019 212 TVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGG---HIVTTTDCYRKTRIFIETVLPKMGITA----TVIDP 282 (451)
Q Consensus 212 ~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~~GD---~VIv~~~~Y~~t~~~l~~~l~~~Gi~v----~~vd~ 282 (451)
.+.+++ + +++|+ ++.++++|+++++..++.+++++|+ +|++.+..|++....+...+++.|+++ ..++.
T Consensus 73 ~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~ 150 (406)
T TIGR01814 73 DESLLK-L-RLVGAKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP 150 (406)
T ss_pred hhhhcc-c-cccCCCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc
Confidence 344444 4 78886 3455666677999998888876653 688888999986655544456667775 33332
Q ss_pred -----CCHHHHHHhhc--CCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEEC
Q 013019 283 -----ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (451)
Q Consensus 283 -----~D~d~Le~ai~--~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S 354 (451)
.|++++++.++ ..+|++|+++.++|.+|.+.|+++|.++||++|+++++|++++.+. ..+..++|+|+++.|
T Consensus 151 ~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s 230 (406)
T TIGR01814 151 REEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWC 230 (406)
T ss_pred CCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEc
Confidence 26788888774 1259999999999999999999999999999999999999987653 233336799999999
Q ss_pred CcccCCccccceeEEEEeCH
Q 013019 355 ATKFIGGHNDVLAGSISGSG 374 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~ 374 (451)
.+|+++|+. .+|+++.++
T Consensus 231 ~hK~l~g~p--G~~l~v~~~ 248 (406)
T TIGR01814 231 TYKYLNAGP--GAGAFVHEK 248 (406)
T ss_pred CccccCCCC--CeEEEEehh
Confidence 999986543 144444443
No 245
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.65 E-value=6.6e-15 Score=150.98 Aligned_cols=173 Identities=19% Similarity=0.240 Sum_probs=141.6
Q ss_pred HhcccCCccccCCCchhHHHHHHHHHhhhCC--CcEEEeC-CHHHHHHHHHHHHc-cCCC----eEEEcCCCCcchHHHH
Q 013019 195 KEKRRASFEYGRYGNPTTVVVEEKMSALEGA--ESTVIMA-SGMSASTVMLLALV-PAGG----HIVTTTDCYRKTRIFI 266 (451)
Q Consensus 195 ~~~~~~~~~Y~R~~npt~~~Lee~LA~l~ga--e~~vv~s-SG~aAi~~al~all-~~GD----~VIv~~~~Y~~t~~~l 266 (451)
+.+.+.. .|++...+..++.|+.+|++.|+ .+ |+|+ ++++++.+++..+. ..+| |||+....|.+....+
T Consensus 71 ~~nPh~~-~y~w~~~~~~E~aR~~VAklInAd~~d-IiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~ 148 (428)
T KOG1549|consen 71 LGNPHSR-SYGWKAEDAVEAAREQVAKLINADPSD-IVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSC 148 (428)
T ss_pred hcCCCcc-ccchhhhHHHHHHHHHHHHHhCCCCCc-EEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHH
Confidence 3344333 57776777788999999999998 34 5555 45599999998873 3566 9999999999876555
Q ss_pred HHhhhcCCcEEEEeCC-----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC-Cc
Q 013019 267 ETVLPKMGITATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LN 340 (451)
Q Consensus 267 ~~~l~~~Gi~v~~vd~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~-~~ 340 (451)
..++..|+++++++. .|.+.++++|+++ |++|.+...+|..|.++|+++|.++|++.|+.+++|.+++.+ ..
T Consensus 149 -~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~-T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~ 226 (428)
T KOG1549|consen 149 -RALQEEGLEVTYLPVEDSGLVDISKLREAIRSK-TRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIP 226 (428)
T ss_pred -HHHHhcCeEEEEeccCccccccHHHHHHhcCCC-ceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCcc
Confidence 346667899998864 3789999999985 999999999999999999999999999999999999999876 33
Q ss_pred cccccCCCcEEEECCcccCCccccceeEEEEeCH
Q 013019 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG 374 (451)
Q Consensus 341 ~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~ 374 (451)
.+.-++++|++..|.||+++.++ .|+++.++
T Consensus 227 vDV~eln~D~~s~s~HK~ygp~~---iGaLYvr~ 257 (428)
T KOG1549|consen 227 VDVQELNADFLSISAHKIYGPPG---IGALYVRR 257 (428)
T ss_pred ccHHHcCchheeeecccccCCCc---ceEEEEcc
Confidence 45557899999999999999987 78888875
No 246
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.64 E-value=7.5e-15 Score=148.26 Aligned_cols=213 Identities=22% Similarity=0.234 Sum_probs=155.5
Q ss_pred CchhHHHHH----HHHHhhhCCCcEEEe-CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe--
Q 013019 208 GNPTTVVVE----EKMSALEGAESTVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI-- 280 (451)
Q Consensus 208 ~npt~~~Le----e~LA~l~gae~~vv~-sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v-- 280 (451)
|+...+.+| +...+|+|++.+-+. .||+.|+.+++++|++|||+|+-.+..+|+....-.. ....|..+..+
T Consensus 66 Gce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~~-v~~sG~~~~~v~Y 144 (413)
T COG0112 66 GCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSP-VNFSGKLFNVVSY 144 (413)
T ss_pred CCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCCC-CCccceeEEeEec
Confidence 556666554 556678899876665 5999999999999999999999999999885422100 11112222221
Q ss_pred --C----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCC-----CCCCccccccCCCc
Q 013019 281 --D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-----ATPLNQKALSLGAD 349 (451)
Q Consensus 281 --d----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tf-----a~~~~~~pl~~GaD 349 (451)
| ..|.|++++.+.+.++|+|+.- .+-.-+..|.+++.+||++.|++|++|-++ +.+..++|+.+ +|
T Consensus 145 ~vd~et~~IDyD~~~k~a~e~kPK~ii~G--~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~-Ad 221 (413)
T COG0112 145 GVDPETGLIDYDEVEKLAKEVKPKLIIAG--GSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH-AD 221 (413)
T ss_pred ccccccCccCHHHHHHHHHHhCCCEEEEC--ccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc-cc
Confidence 2 2488999998887789999983 445678899999999999999999999995 45678899998 99
Q ss_pred EEEECCcccCCccccceeEEEEeCH-HHHHHHHHHhHhhCCCccHHH---HH---HHHHhhH-HHHHHHHHHHHHHHHHH
Q 013019 350 LVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNA---AY---LIIRGMK-TLHLRVQQQNSTALRMA 421 (451)
Q Consensus 350 iVv~S~SK~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~~G~~ls~~~---a~---l~lrgL~-tl~~Rl~~~~~nA~~La 421 (451)
+|..|+||+|.|+. ||+|.+++ ++.+++.+.-. .|..-+|.. |. .+...++ .+....++..+||+.|+
T Consensus 222 vVTtTTHKTlrGPr---GG~Il~~~eel~kkin~aVF-Pg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLA 297 (413)
T COG0112 222 VVTTTTHKTLRGPR---GGIILTNDEELAKKINSAVF-PGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALA 297 (413)
T ss_pred eEeCCcccCCCCCC---ceEEEeccHHHHHHhhhhcC-CccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH
Confidence 99999999999995 99999985 78888876432 222223322 11 1222222 23555678889999999
Q ss_pred HHHHcCC
Q 013019 422 EILEAHP 428 (451)
Q Consensus 422 e~L~~~p 428 (451)
+.|.++.
T Consensus 298 e~l~~~G 304 (413)
T COG0112 298 EALKERG 304 (413)
T ss_pred HHHHHcC
Confidence 9999853
No 247
>PLN02271 serine hydroxymethyltransferase
Probab=99.64 E-value=2.3e-14 Score=152.44 Aligned_cols=213 Identities=21% Similarity=0.166 Sum_probs=147.4
Q ss_pred CchhHHHHH----HHHHhhhCCCc-----EEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHH-----HhhhcC
Q 013019 208 GNPTTVVVE----EKMSALEGAES-----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIE-----TVLPKM 273 (451)
Q Consensus 208 ~npt~~~Le----e~LA~l~gae~-----~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~-----~~l~~~ 273 (451)
|+...+++| ++..+++|.+. .|-.-||+.|+.+++.++++|||+|+..+..||+...... ......
T Consensus 188 G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~s 267 (586)
T PLN02271 188 GNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGA 267 (586)
T ss_pred CChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccc
Confidence 556566554 45556778543 2444599999999999999999999999999998654321 112334
Q ss_pred CcEEEEeC--------CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-----c
Q 013019 274 GITATVID--------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----N 340 (451)
Q Consensus 274 Gi~v~~vd--------~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-----~ 340 (451)
|+.+..+. ..|.++|++.+...++|+|++..-.+| ...|+++|.++|+++|+++++|.++..++ .
T Consensus 268 G~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~ 345 (586)
T PLN02271 268 SIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKEC 345 (586)
T ss_pred cceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcC
Confidence 55444332 248899998444446999999777777 77899999999999999999999976543 3
Q ss_pred cccccCCCcEEEECCcccCCccccceeEEEEeCHH--------------------HHHHHHHHhH--hhCCCccHHHHHH
Q 013019 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--------------------LVTQIRNLHH--VLGGALNPNAAYL 398 (451)
Q Consensus 341 ~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~e--------------------li~~lr~~~~--~~G~~ls~~~a~l 398 (451)
+.|+. ++|+++.|+||+|.|+. ||+|+.+++ +.+++..... ..|+......+.+
T Consensus 346 ~sP~~-~aDvvt~TTHKtLrGPr---GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAal 421 (586)
T PLN02271 346 VNPFD-YCDIVTSTTHKSLRGPR---GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAAL 421 (586)
T ss_pred CCCCc-CCcEEEeCCcccCCCCC---ceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHH
Confidence 45655 59999999999999996 788887653 4444443321 1122221112222
Q ss_pred HHHhhH-----HHHHHHHHHHHHHHHHHHHHHcC
Q 013019 399 IIRGMK-----TLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 399 ~lrgL~-----tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+ -+++ .+....++..+|++.|++.|.++
T Consensus 422 A-valkea~~~efk~Ya~QVv~NAkaLA~~L~~~ 454 (586)
T PLN02271 422 A-IALKQVATPEYKAYMQQVKKNAQALASALLRR 454 (586)
T ss_pred H-HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC
Confidence 1 1222 34566788899999999999887
No 248
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.63 E-value=3.4e-14 Score=148.64 Aligned_cols=217 Identities=19% Similarity=0.235 Sum_probs=150.9
Q ss_pred CCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHH-HHHhhhcCCcE-E
Q 013019 200 ASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIF-IETVLPKMGIT-A 277 (451)
Q Consensus 200 ~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~-l~~~l~~~Gi~-v 277 (451)
++..|+ ++|+..+||+.+++++|.++++.++||++|+.+++...+++||.| +...|..+... + ...|.. +
T Consensus 70 GDd~Ya--gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI----~~~Ga~fv 141 (460)
T PRK13237 70 GDEAYA--GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQ----ELNGGIFV 141 (460)
T ss_pred cchhhc--CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHH----HhCCcEEE
Confidence 344576 889999999999999999999999999999998766678999965 54544443322 2 222332 1
Q ss_pred EEe-------------C-CCCHHHHHHhhcCC---CeEEEEEeCCCCCc-cccc---cHHHHHHHHHhcCCEEEEecCCC
Q 013019 278 TVI-------------D-PADMEGLEAALNNN---NVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 278 ~~v-------------d-~~D~d~Le~ai~~~---~tklV~lesPsNPt-G~v~---DL~~IaelA~~~g~~lVVD~tfa 336 (451)
..+ + ..|+++|+++|+++ ++++|.++.++|.. |.+. ++++|.++|++||++||.|.+..
T Consensus 142 Di~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra 221 (460)
T PRK13237 142 DIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRC 221 (460)
T ss_pred eeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcch
Confidence 111 1 13799999999753 35678888889988 5665 78999999999999999999853
Q ss_pred CC-----------Ccccccc-------CCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhh-C----CCcc
Q 013019 337 TP-----------LNQKALS-------LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL-G----GALN 392 (451)
Q Consensus 337 ~~-----------~~~~pl~-------~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~-G----~~ls 392 (451)
.+ +..+++. ..+|+++.|++|.+..+. ||+|+.+ +++.++++.+...+ | +.++
T Consensus 222 ~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~---GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~ 298 (460)
T PRK13237 222 VENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI---GGFLAMNDEELFDEAKELVVVYEGMPSYGGMA 298 (460)
T ss_pred hcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC---ceEEEECCHHHHHHHHHhccccCCCcCCCChh
Confidence 22 3233321 248999999999998863 7888875 57888888775433 2 2333
Q ss_pred HHHHHHHHHhhHH-HH-HHHHHHHHHHHHHHHHHHcC
Q 013019 393 PNAAYLIIRGMKT-LH-LRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 393 ~~~a~l~lrgL~t-l~-~Rl~~~~~nA~~Lae~L~~~ 427 (451)
.-+...+..||+. +. ..++...++++.|++.|.+.
T Consensus 299 grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 299 GRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLAA 335 (460)
T ss_pred hhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHHC
Confidence 3232222334432 22 34556667889999999875
No 249
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.62 E-value=9.1e-14 Score=142.57 Aligned_cols=213 Identities=18% Similarity=0.217 Sum_probs=156.5
Q ss_pred hHHHHHHHHHhhhCCC--cEE-EeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-----
Q 013019 211 TTVVVEEKMSALEGAE--STV-IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (451)
Q Consensus 211 t~~~Lee~LA~l~gae--~~v-v~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----- 282 (451)
....+.+.|..+++.+ +++ +.+||+.++.+++..+++|||+|++......+ .-+..+++++|.+++.++.
T Consensus 39 ~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG--~R~~~ia~~~g~~v~~~~~~wg~~ 116 (383)
T COG0075 39 IMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFG--ERFAEIAERYGAEVVVLEVEWGEA 116 (383)
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHH--HHHHHHHHHhCCceEEEeCCCCCC
Confidence 3456677778888865 444 45799999999999999999999987755544 3355788899998888763
Q ss_pred CCHHHHHHhhcCC-CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCC-CCccccccCCCcEEEECCcccCC
Q 013019 283 ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFIG 360 (451)
Q Consensus 283 ~D~d~Le~ai~~~-~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~-~~~~~pl~~GaDiVv~S~SK~l~ 360 (451)
.|+++++++++++ +.++|.+..--..||...|+++|+++|++||+++|||..-+- ....+.-++|+|+++.+..|.++
T Consensus 117 v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~ 196 (383)
T COG0075 117 VDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALG 196 (383)
T ss_pred CCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhcc
Confidence 4899999999843 466776644445679999999999999999999999998442 34556668999999999999999
Q ss_pred ccccceeEEEEeCHHHHHHHHHH------------hHhh---CC---CccHHHHHHHHHhhH-----HHHHHHHHHHHHH
Q 013019 361 GHNDVLAGSISGSGKLVTQIRNL------------HHVL---GG---ALNPNAAYLIIRGMK-----TLHLRVQQQNSTA 417 (451)
Q Consensus 361 G~gdv~gG~Iv~~~eli~~lr~~------------~~~~---G~---~ls~~~a~l~lrgL~-----tl~~Rl~~~~~nA 417 (451)
++. ..|++..+++.++++... ...+ +. +++...-+.+..+|+ .++.|.+||.+++
T Consensus 197 ~PP--Gla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~ 274 (383)
T COG0075 197 APP--GLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLA 274 (383)
T ss_pred CCC--ccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 886 478888888766655422 1122 11 122222232223332 3678899999999
Q ss_pred HHHHHHHHcC
Q 013019 418 LRMAEILEAH 427 (451)
Q Consensus 418 ~~Lae~L~~~ 427 (451)
..+.+.+++.
T Consensus 275 ~a~r~~~~al 284 (383)
T COG0075 275 EALRAGLEAL 284 (383)
T ss_pred HHHHHHHHHc
Confidence 9999999864
No 250
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.61 E-value=9.2e-14 Score=146.01 Aligned_cols=217 Identities=15% Similarity=0.014 Sum_probs=149.5
Q ss_pred hhHHHHHHHHHhhhCCC----cEEE--eCCHHHHHHHHHHHHcc--------CC-----CeEEEcCCCCcchHHHHHHhh
Q 013019 210 PTTVVVEEKMSALEGAE----STVI--MASGMSASTVMLLALVP--------AG-----GHIVTTTDCYRKTRIFIETVL 270 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae----~~vv--~sSG~aAi~~al~all~--------~G-----D~VIv~~~~Y~~t~~~l~~~l 270 (451)
...++..+++++++|.+ +.+. +++|++|+..++.+... .| .+|++++..|.+.... +
T Consensus 80 ~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka----~ 155 (431)
T TIGR01788 80 EIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKF----A 155 (431)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHH----H
Confidence 33455678899999875 2332 57888999888765431 12 3799999888876543 3
Q ss_pred hcCCcEEEEeCC------CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc------CCEEEEecCCCCC
Q 013019 271 PKMGITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATP 338 (451)
Q Consensus 271 ~~~Gi~v~~vd~------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~------g~~lVVD~tfa~~ 338 (451)
..+|++++.++. .|+++|+++|+++ |.+|.+...+|.+|.+.|+++|+++|+++ |+++++|.+++.+
T Consensus 156 ~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~-t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~ 234 (431)
T TIGR01788 156 RYFDVELREVPMDPGRYVIDPEQVVEAVDEN-TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGF 234 (431)
T ss_pred HHcCceeEEEecCCCceeeCHHHHHHHHhhC-CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHH
Confidence 445776666542 2789999999875 89999999999999999999999999999 9999999998832
Q ss_pred C-----ccccc---cCCCcEEEECCcccCCccccceeEEEEeCHH--HHHHHHHHhHhhCC----------Cc--cHHHH
Q 013019 339 L-----NQKAL---SLGADLVLHSATKFIGGHNDVLAGSISGSGK--LVTQIRNLHHVLGG----------AL--NPNAA 396 (451)
Q Consensus 339 ~-----~~~pl---~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~e--li~~lr~~~~~~G~----------~l--s~~~a 396 (451)
. ..-+. ..++|.+..|.||++.++- ..|+++.++. +.+.+.....+++. .. .....
T Consensus 235 ~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~--g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~ 312 (431)
T TIGR01788 235 IAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYP--GVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQ 312 (431)
T ss_pred HHHHhCCCchhhcCCCCceEEEECchhccCCCC--CcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHH
Confidence 1 01111 3478999999999985553 2677776543 22222111111111 10 12335
Q ss_pred HHHHHh--hHHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Q 013019 397 YLIIRG--MKTLHLRVQQQNSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 397 ~l~lrg--L~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V 433 (451)
|+.++. ...+...+++..+.++.+++.|+++|.++-+
T Consensus 313 w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~ 351 (431)
T TIGR01788 313 YYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEII 351 (431)
T ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEe
Confidence 665543 3456677888889999999999999887554
No 251
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.60 E-value=1.6e-13 Score=142.61 Aligned_cols=216 Identities=13% Similarity=0.159 Sum_probs=145.4
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc--------CCCeEEEcCCCCcch-HHHHH--------Hhh
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKT-RIFIE--------TVL 270 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~--------~GD~VIv~~~~Y~~t-~~~l~--------~~l 270 (451)
.++...+|+++|+++.+.+.+++++||++|+..++..... ..++|+..+..|.+. ...+. ..+
T Consensus 80 ~~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~ 159 (403)
T PRK05093 80 TNEPALRLAKKLIDATFAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGF 159 (403)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcC
Confidence 4566789999999998878999999999999998875421 234677777766663 32211 001
Q ss_pred hcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccc--c---HHHHHHHHHhcCCEEEEecCCCCC-Cccccc
Q 013019 271 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV--D---VKLVSDLCHKKGAIVCIDGTFATP-LNQKAL 344 (451)
Q Consensus 271 ~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~--D---L~~IaelA~~~g~~lVVD~tfa~~-~~~~pl 344 (451)
......+..++..|++++++.+.++ +++|++| |.||+|.+. + +++|.++|++||+++|+||++... ...+..
T Consensus 160 ~~~~~~~~~~~~~d~~~l~~~l~~~-~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~ 237 (403)
T PRK05093 160 GPKPADITHVPFNDLAAVKAVIDDH-TCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF 237 (403)
T ss_pred CCCCCCcEEeCCCCHHHHHHHhcCC-eEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch
Confidence 1112245566777999999999764 9999998 777877654 2 899999999999999999997632 111111
Q ss_pred ---cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHH--HHHHHHHHHHHH
Q 013019 345 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALR 419 (451)
Q Consensus 345 ---~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~--~Rl~~~~~nA~~ 419 (451)
..+.+.-+.|++|.+++ | .++|++++++++++.+...........++..++.++..|+.+. ...++..++.+.
T Consensus 238 ~~~~~~~~pdi~s~sK~l~~-G-~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~ 315 (403)
T PRK05093 238 AYMHYGVTPDILTSAKALGG-G-FPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQR 315 (403)
T ss_pred hhhhcCCCCCEEEecccccC-C-cceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 12222225579999984 4 5789999999988887643222223346666666555555442 234566667777
Q ss_pred HHHHHHcC
Q 013019 420 MAEILEAH 427 (451)
Q Consensus 420 Lae~L~~~ 427 (451)
+.+.|++.
T Consensus 316 l~~~L~~~ 323 (403)
T PRK05093 316 FVDGLQKI 323 (403)
T ss_pred HHHHHHHH
Confidence 77777764
No 252
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.59 E-value=5.2e-14 Score=159.40 Aligned_cols=213 Identities=17% Similarity=0.178 Sum_probs=155.8
Q ss_pred HHHHHHHHhhhCCCcEEEeCCHH----HHHHHHHHHHccC-CC----eEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 213 VVVEEKMSALEGAESTVIMASGM----SASTVMLLALVPA-GG----HIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 213 ~~Lee~LA~l~gae~~vv~sSG~----aAi~~al~all~~-GD----~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
.+++++|+++.|.+.+++.++.+ .|+..++.++.++ || +||++...|+.....+ ...|+++.+++.
T Consensus 571 ~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a----~~~G~~vv~v~~d 646 (993)
T PLN02414 571 EDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASA----AMCGMKIVVVGTD 646 (993)
T ss_pred HHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHH----HHCCCEEEEeccC
Confidence 57899999999997777766555 6888999999877 88 8999999999876433 336889888764
Q ss_pred ----CCHHHHHHhhcC--CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC--CccccccCCCcEEEEC
Q 013019 283 ----ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--LNQKALSLGADLVLHS 354 (451)
Q Consensus 283 ----~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~--~~~~pl~~GaDiVv~S 354 (451)
.|+++|++++++ ++|++|++.+|+|.+|...|+++|+++||++|+++++|.+...+ ....|.++|+|+++.|
T Consensus 647 ~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~s 726 (993)
T PLN02414 647 AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLN 726 (993)
T ss_pred CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEec
Confidence 389999999985 24899999999999999999999999999999999999997543 3456778999999999
Q ss_pred CcccCCccc---cceeEEEEeCHHHHHHHHHH------------h-HhhCCCc-cHH-------H--HHHHHHhhHHHHH
Q 013019 355 ATKFIGGHN---DVLAGSISGSGKLVTQIRNL------------H-HVLGGAL-NPN-------A--AYLIIRGMKTLHL 408 (451)
Q Consensus 355 ~SK~l~G~g---dv~gG~Iv~~~eli~~lr~~------------~-~~~G~~l-s~~-------~--a~l~lrgL~tl~~ 408 (451)
.+|+|+++. .-..|++..++++...+-.. . ...|..- .++ . +|+...|.+.+..
T Consensus 727 ~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~ 806 (993)
T PLN02414 727 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTD 806 (993)
T ss_pred CCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHH
Confidence 999777442 12368888888765443211 1 0112211 122 1 2333334444544
Q ss_pred HHHHHHHHHHHHHHHHHcCCC
Q 013019 409 RVQQQNSTALRMAEILEAHPK 429 (451)
Q Consensus 409 Rl~~~~~nA~~Lae~L~~~p~ 429 (451)
--++...|+.++++.|+++..
T Consensus 807 ~a~~a~~nAnYl~~rL~~~~~ 827 (993)
T PLN02414 807 ASKIAILNANYMAKRLEGHYP 827 (993)
T ss_pred HHHHHHHHHHHHHHHHHhhCC
Confidence 445566788899998977543
No 253
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.59 E-value=3.7e-14 Score=146.67 Aligned_cols=215 Identities=21% Similarity=0.234 Sum_probs=137.1
Q ss_pred CchhHHHH----HHHHHhhhCCC----cEEE-eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHh-h-----hc
Q 013019 208 GNPTTVVV----EEKMSALEGAE----STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV-L-----PK 272 (451)
Q Consensus 208 ~npt~~~L----ee~LA~l~gae----~~vv-~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~-l-----~~ 272 (451)
|....+++ ++++.++++++ .+-+ .-||+.|+.+++.+|++|||+|+..+..+|+....-... . ..
T Consensus 60 G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~ 139 (399)
T PF00464_consen 60 GCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASG 139 (399)
T ss_dssp STHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHH
T ss_pred CcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhccccccccccccccccccc
Confidence 44555554 56677789988 6655 469999999999999999999999998888743110000 0 00
Q ss_pred CCcEEEE--eC----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCC-----CCCCcc
Q 013019 273 MGITATV--ID----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-----ATPLNQ 341 (451)
Q Consensus 273 ~Gi~v~~--vd----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tf-----a~~~~~ 341 (451)
...++.. +| ..|.|++++.+++.++++|++..-+ .....|++++.+||++.|++|++|.++ +.+..+
T Consensus 140 ~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~--y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~ 217 (399)
T PF00464_consen 140 LYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASS--YPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFP 217 (399)
T ss_dssp HHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SS--TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS-
T ss_pred ceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchh--ccCccCHHHHHHHHHhcCcEEEecccccccceehheec
Confidence 1122222 23 2388999998876678999985443 567789999999999999999999995 446778
Q ss_pred ccccCCCcEEEECCcccCCccccceeEEEEeC--------------HHHHHHHHHHhHhh--CC-CccHHHHHH--HHHh
Q 013019 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGS--------------GKLVTQIRNLHHVL--GG-ALNPNAAYL--IIRG 402 (451)
Q Consensus 342 ~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~--------------~eli~~lr~~~~~~--G~-~ls~~~a~l--~lrg 402 (451)
+|++. +|+|..|++|.|.|+. +|+|..+ +++.+++.+..... |+ .++...+.+ +...
T Consensus 218 ~P~~~-ADvvt~sThKtl~GPr---ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea 293 (399)
T PF00464_consen 218 NPFPY-ADVVTGSTHKTLRGPR---GGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEA 293 (399)
T ss_dssp -GCCT-SSEEEEESSGGG-SSS----EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHH
T ss_pred Ccccc-ceEEEeeccccccccC---ceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcc
Confidence 99987 9999999999999996 9999999 77888887654221 21 122222221 1222
Q ss_pred hH-HHHHHHHHHHHHHHHHHHHHHcCC
Q 013019 403 MK-TLHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 403 L~-tl~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
++ ....-.++..+||+.|++.|.++.
T Consensus 294 ~~~~fk~Ya~qVv~NAk~La~~L~~~G 320 (399)
T PF00464_consen 294 LSPEFKEYAKQVVKNAKALAEALQERG 320 (399)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 22 345667888999999999999874
No 254
>PRK15029 arginine decarboxylase; Provisional
Probab=99.59 E-value=9e-14 Score=153.68 Aligned_cols=211 Identities=14% Similarity=0.108 Sum_probs=150.4
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
+.....+.++..|+++|++.+.+..+|+ .+|.+++++++++||+|++++++|-+.+.. +...|+...++.+
T Consensus 203 p~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~a----l~L~ga~Pvyl~P~~~~ 278 (755)
T PRK15029 203 HTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQG----LILTGAKPVYMVPSRNR 278 (755)
T ss_pred CCcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHH----HHHcCCeEEEecccccc
Confidence 3444678899999999999999999999 789999999999999999999999887643 3445666666642
Q ss_pred ------CC-----HHHHHHhhcCC-CeE--------EEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC----
Q 013019 283 ------AD-----MEGLEAALNNN-NVS--------LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP---- 338 (451)
Q Consensus 283 ------~D-----~d~Le~ai~~~-~tk--------lV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~---- 338 (451)
.+ ++.|+++++++ .++ ++++.+|+ ..|.+.|+++|+++||++|++|+|||+++..
T Consensus 279 ~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~ 357 (755)
T PRK15029 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFN 357 (755)
T ss_pred cCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeCHHHHHHHHHhcCCeEEEECccccccccC
Confidence 12 78898888543 134 89998887 7899999999999999999999999997652
Q ss_pred --Ccc-ccc-----c-CCCc-EEEECCcccCCccccceeEEEEeCHH--H--HHHHHHHhHhhCCCccHHHHHHHHHhh-
Q 013019 339 --LNQ-KAL-----S-LGAD-LVLHSATKFIGGHNDVLAGSISGSGK--L--VTQIRNLHHVLGGALNPNAAYLIIRGM- 403 (451)
Q Consensus 339 --~~~-~pl-----~-~GaD-iVv~S~SK~l~G~gdv~gG~Iv~~~e--l--i~~lr~~~~~~G~~ls~~~a~l~lrgL- 403 (451)
+.. .++ . .|+| ++++|+||.+++.. .+.++-.+.. . .++++.....+.++... |+++.+|
T Consensus 358 ~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alT--QaS~LHv~~~~~~id~~r~~~~l~~~qSTSPS---Y~LmASLD 432 (755)
T PRK15029 358 PIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALS--QASYIHVREGRGAINFSRFNQAYMMHATTSPL---YAICASND 432 (755)
T ss_pred ccccccccccccccccCCCceEEEEchhhcccchh--hhhhheeCCCccccCHHHHHHHHHHHcCCCcH---HHHHHHHH
Confidence 222 334 3 7898 99999999999775 4566655332 2 24666665555543322 2222222
Q ss_pred ------HH--HHHHHHHHHHHHHHHHHHHHcCC
Q 013019 404 ------KT--LHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 404 ------~t--l~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
+. -...+++..+.+..+.+.|.+.+
T Consensus 433 ~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 433 VAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 21 12234555666777777776654
No 255
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.58 E-value=2.6e-13 Score=139.42 Aligned_cols=223 Identities=18% Similarity=0.150 Sum_probs=148.9
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc-cCC-CeEEEcCCCCcc-hHHHHHHhhh-c----C---C
Q 013019 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV-PAG-GHIVTTTDCYRK-TRIFIETVLP-K----M---G 274 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all-~~G-D~VIv~~~~Y~~-t~~~l~~~l~-~----~---G 274 (451)
.+.++...+|.+++++..+.+.+++++||++|+..++.... -+| ++|++.++.|.+ ++..+...-. . + .
T Consensus 67 ~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~ 146 (377)
T PRK02936 67 LFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLL 146 (377)
T ss_pred ccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCC
Confidence 34467777888888887766788889999999999987532 244 568888877765 3322211100 0 0 1
Q ss_pred cEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccc----cHHHHHHHHHhcCCEEEEecCCCCC-Cccccc---cC
Q 013019 275 ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATP-LNQKAL---SL 346 (451)
Q Consensus 275 i~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~----DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl---~~ 346 (451)
..+.+++..|++++++.+.++ +++|++|.+.++.|... .+++|.++|++||+++|+||++... ....+. ..
T Consensus 147 ~~~~~~~~~d~~~l~~~~~~~-~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~ 225 (377)
T PRK02936 147 PGFTHVPFNDIKALKEVMNEE-VAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQF 225 (377)
T ss_pred CCceEeCCCCHHHHHHhccCC-eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhh
Confidence 133445666899999999764 99999999999887653 3999999999999999999997431 111111 12
Q ss_pred C--CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHH
Q 013019 347 G--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAE 422 (451)
Q Consensus 347 G--aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~--~Rl~~~~~nA~~Lae 422 (451)
+ .|++ +++|.+++ | ..+|++++++++.+.+...........++..+..++..|+.+. ..+++..++...+.+
T Consensus 226 ~~~~di~--t~sK~l~~-G-~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~ 301 (377)
T PRK02936 226 GLDPDIV--TVAKGLGN-G-IPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQ 301 (377)
T ss_pred CCCCcEE--EEcccccC-C-CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 3 3554 68999984 4 5688999999888877543322222356777766666666542 345666667777777
Q ss_pred HHHc----CCCeEEE
Q 013019 423 ILEA----HPKVLLL 433 (451)
Q Consensus 423 ~L~~----~p~V~~V 433 (451)
.|++ ++.+..+
T Consensus 302 ~L~~~~~~~~~~~~v 316 (377)
T PRK02936 302 KLQEELEHLECVKNI 316 (377)
T ss_pred HHHHHHhhCCcEEeE
Confidence 6654 4555443
No 256
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.58 E-value=2.6e-13 Score=141.00 Aligned_cols=214 Identities=14% Similarity=0.135 Sum_probs=140.5
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc--------CCCeEEEcCCCCcch-HHHHHHhh-------
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKT-RIFIETVL------- 270 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~--------~GD~VIv~~~~Y~~t-~~~l~~~l------- 270 (451)
+.++...+|+++|+++.+.+.+++++||++|+..++..... ..++||..+..|.+. ...+...-
T Consensus 74 ~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~ 153 (397)
T TIGR03246 74 YTNEPVLRLAKKLVDATFADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQG 153 (397)
T ss_pred cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccC
Confidence 46788889999999999888999999999999999886521 235677777666653 32221110
Q ss_pred -hcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccc----ccHHHHHHHHHhcCCEEEEecCCCCCC------
Q 013019 271 -PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC----VDVKLVSDLCHKKGAIVCIDGTFATPL------ 339 (451)
Q Consensus 271 -~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v----~DL~~IaelA~~~g~~lVVD~tfa~~~------ 339 (451)
......+..++..|++++++++++ ++++|++|.++++.|.. ..+++|.++|++||+++|+||++ +++
T Consensus 154 ~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~ 231 (397)
T TIGR03246 154 FAPLPGGIKHAPYNDLAAAKALISD-KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGEL 231 (397)
T ss_pred CCCCCCceEEeCCCCHHHHHHHhcc-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccc
Confidence 011123455677799999999976 49999999766666644 24899999999999999999996 222
Q ss_pred -ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHH--HHHHHHHHH
Q 013019 340 -NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST 416 (451)
Q Consensus 340 -~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~--~Rl~~~~~n 416 (451)
.........|++ +++|.+++ | ...|++++++++++.++..........+|..+..++..|+.+. ..+++..++
T Consensus 232 ~a~~~~gv~pDi~--t~~K~lgg-G-~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~ 307 (397)
T TIGR03246 232 YAYMHYGVTPDIL--TSAKALGG-G-FPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQR 307 (397)
T ss_pred hhhhhcCCCCCEE--EeehhhhC-C-cceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 111112234665 68999974 3 4678888898888777533221111235555544444444332 234555566
Q ss_pred HHHHHHHHHc
Q 013019 417 ALRMAEILEA 426 (451)
Q Consensus 417 A~~Lae~L~~ 426 (451)
.+.+.+.|++
T Consensus 308 ~~~l~~~L~~ 317 (397)
T TIGR03246 308 HDLFVDGLEK 317 (397)
T ss_pred HHHHHHHHHH
Confidence 6667666654
No 257
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.55 E-value=3.9e-13 Score=151.45 Aligned_cols=175 Identities=15% Similarity=0.074 Sum_probs=127.7
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--Cc-EEEeCC-HHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEE
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA--ES-TVIMAS-GMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga--e~-~vv~sS-G~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~ 278 (451)
.++......++.++.+++++|+ ++ .++|++ +++|+.+++.++ +++||+|+++...|.+...+. ..+++.|+++.
T Consensus 72 ~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~-~~a~~~G~~v~ 150 (805)
T PLN02724 72 SSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIR-EYALEKGAAAI 150 (805)
T ss_pred hhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHH-HHHHHcCCeEE
Confidence 3444455677889999999997 33 456665 559999888877 688999999988898766443 55667799888
Q ss_pred EeCCC-------------C--HHHHHHhhc---------CCCeEEEEEeCCCCCccccccHHHHHHHHHhc--------C
Q 013019 279 VIDPA-------------D--MEGLEAALN---------NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--------G 326 (451)
Q Consensus 279 ~vd~~-------------D--~d~Le~ai~---------~~~tklV~lesPsNPtG~v~DL~~IaelA~~~--------g 326 (451)
+++.. + .++|++.++ ..++++|.+...+|.+|.+.|++.|.++++.. +
T Consensus 151 ~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~ 230 (805)
T PLN02724 151 AVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGR 230 (805)
T ss_pred eccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcc
Confidence 87643 1 144555431 12478999999999999999999775555432 3
Q ss_pred CEEEEecCCCCCCc-cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHH
Q 013019 327 AIVCIDGTFATPLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR 381 (451)
Q Consensus 327 ~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr 381 (451)
+++++|.+++.+.. .+.-++|+|+++.|++|+++|+. ..|+++.++++++++.
T Consensus 231 ~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~--G~G~L~vr~~~~~~l~ 284 (805)
T PLN02724 231 WMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPT--GLGALLVRRDAAKLLK 284 (805)
T ss_pred eEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCC--CceEEEEehhhhhhhc
Confidence 57999999765532 23335789999999999999664 3788888888777655
No 258
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.55 E-value=1.2e-12 Score=135.95 Aligned_cols=217 Identities=19% Similarity=0.175 Sum_probs=147.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc---------C-CCeEEEcCCCCcc-hHHHHHHhh-----h
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------A-GGHIVTTTDCYRK-TRIFIETVL-----P 271 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~---------~-GD~VIv~~~~Y~~-t~~~l~~~l-----~ 271 (451)
..+...+|+++|+++.|.+.+++++||++|+..++..+.. + .++|+..+..|.+ +...+...- .
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~ 156 (401)
T TIGR01885 77 YNDVFGEFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRT 156 (401)
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccccc
Confidence 5677889999999999988999999999999999886522 3 3567778878765 333332110 0
Q ss_pred cCC---cEEEEeCCCCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCC-Ccc
Q 013019 272 KMG---ITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LNQ 341 (451)
Q Consensus 272 ~~G---i~v~~vd~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~-~~~ 341 (451)
.++ ..+..++..|+++|++++++ .++.+|++|.+.+++|.+.+ +++|.++|++||+++|+||++... ...
T Consensus 157 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G 236 (401)
T TIGR01885 157 NFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTG 236 (401)
T ss_pred ccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc
Confidence 112 12344566789999988852 24889999999999999886 999999999999999999996321 111
Q ss_pred cc-----ccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHH--HHHHHH
Q 013019 342 KA-----LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQN 414 (451)
Q Consensus 342 ~p-----l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~--Rl~~~~ 414 (451)
.. .....|+++ ++|.+++.+ ...|++++++++++.++..........++..+..++..|+.+.. ..++..
T Consensus 237 ~~~~~~~~~~~~di~~--~gK~l~~g~-~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~ 313 (401)
T TIGR01885 237 KLLCVDHENVKPDIVL--LGKALSGGV-YPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENAE 313 (401)
T ss_pred hhhHHhhcCCCCCEEE--eeccccCCC-CCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHH
Confidence 11 123467776 569998643 34678888888888775422211112346666555556655542 234555
Q ss_pred HHHHHHHHHHHcC
Q 013019 415 STALRMAEILEAH 427 (451)
Q Consensus 415 ~nA~~Lae~L~~~ 427 (451)
+.+..+.+.|++.
T Consensus 314 ~~~~~~~~~L~~l 326 (401)
T TIGR01885 314 KLGEIFRDQLKKL 326 (401)
T ss_pred HHHHHHHHHHHhc
Confidence 6677777778765
No 259
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.54 E-value=3.6e-13 Score=147.79 Aligned_cols=211 Identities=14% Similarity=0.142 Sum_probs=146.4
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC------
Q 013019 210 PTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~------ 282 (451)
-...+.|+..|+++|++.+.++.+|+ .++.+++++++++||.|++++++|-+.+.. .+-..|....++.+
T Consensus 174 G~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hg---aLiLsGa~PVYl~P~~n~~G 250 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHG---ALIQAGATPVYLETARNPFG 250 (720)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHH---HHHHcCCeEEEeeccccccC
Confidence 34677899999999999999999998 789999999999999999999999886642 12334666555432
Q ss_pred ----CC-----HHHHHHhhcCC---------CeEEEEEeCCCCCccccccHHHHHHH-HHhcCCEEEEecCCCCCCcc--
Q 013019 283 ----AD-----MEGLEAALNNN---------NVSLFFTESPTNPFLRCVDVKLVSDL-CHKKGAIVCIDGTFATPLNQ-- 341 (451)
Q Consensus 283 ----~D-----~d~Le~ai~~~---------~tklV~lesPsNPtG~v~DL~~Iael-A~~~g~~lVVD~tfa~~~~~-- 341 (451)
.+ .+.|+++|+++ +.+++++.+|+ ..|.+.|++.|+++ +|.++ +|++|++|+.....
T Consensus 251 i~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p 328 (720)
T PRK13578 251 FIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIP 328 (720)
T ss_pred CcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHHHHHHHhhccCC-cEEEeCcchhhhccCc
Confidence 13 45588888653 15899998887 78999999999999 68888 99999997653211
Q ss_pred -------ccccCCCc----EEEECCcccCCccccceeEEEEeCHHHH---------HHHHHHhHhhCCCccHHHHHHHHH
Q 013019 342 -------KALSLGAD----LVLHSATKFIGGHNDVLAGSISGSGKLV---------TQIRNLHHVLGGALNPNAAYLIIR 401 (451)
Q Consensus 342 -------~pl~~GaD----iVv~S~SK~l~G~gdv~gG~Iv~~~eli---------~~lr~~~~~~G~~ls~~~a~l~lr 401 (451)
..+++|+| ++++|+||.+++.. .+.+|-.+...+ ++++.....+.++ ||. |+++.
T Consensus 329 ~~~~~p~~al~~GaD~p~i~v~QStHKtL~alT--QaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qST-SPs--Y~LmA 403 (720)
T PRK13578 329 MMADCSPLLLELNENDPGIFVTQSVHKQQAGFS--QTSQIHKKDNHIKGQARYCPHKRLNNAFMLHAST-SPF--YPLFA 403 (720)
T ss_pred ccccCChhhhhcCCCCCCeEEEEChhhcchhhh--hHhhhhcCCcccccccccCCHHHHHHHHHHHcCC-ChH--HHHHH
Confidence 23567999 99999999999876 456665544332 4566555555443 221 22222
Q ss_pred hhHH---------HHHHHHHHHHHHHHHHHHH-HcCCCe
Q 013019 402 GMKT---------LHLRVQQQNSTALRMAEIL-EAHPKV 430 (451)
Q Consensus 402 gL~t---------l~~Rl~~~~~nA~~Lae~L-~~~p~V 430 (451)
+|+. -...+++..+.+..+.+.| +..+.+
T Consensus 404 SLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~ 442 (720)
T PRK13578 404 ALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLI 442 (720)
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 2211 1122455566677777766 555554
No 260
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.53 E-value=7.9e-13 Score=127.65 Aligned_cols=218 Identities=16% Similarity=0.224 Sum_probs=159.8
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC----
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~---- 283 (451)
..|....+-+.|++++|.+.+-++...-+|-++++.+++++||-|++...+|..++. .+++.|+.+..++..
T Consensus 59 ~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyv----AAEragl~v~eVp~tg~Pe 134 (382)
T COG1103 59 TKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYV----AAERAGLNVAEVPNTGYPE 134 (382)
T ss_pred cCCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHH----HHHhcCCeEEecCCCCCCc
Confidence 357777887779999998766555444499999999999999999999999998874 345678888777632
Q ss_pred ---CHHHHHHhhc----C--CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEE
Q 013019 284 ---DMEGLEAALN----N--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLH 353 (451)
Q Consensus 284 ---D~d~Le~ai~----~--~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~ 353 (451)
+++...+.|+ + .++.+.++..|....|.+.|-+.++++|+++|+++++..+|..+. ..+..+.|+|+++.
T Consensus 135 y~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVg 214 (382)
T COG1103 135 YKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVG 214 (382)
T ss_pred eEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEe
Confidence 4555444443 2 247899999999999999999999999999999999999997652 33445789999999
Q ss_pred CCcccCCccccceeEEEEeCHHHHHHHHHHh---------HhhCCCccHHHHHHHHHhhHHHHHHHHH---HHHHHHHHH
Q 013019 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLH---------HVLGGALNPNAAYLIIRGMKTLHLRVQQ---QNSTALRMA 421 (451)
Q Consensus 354 S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~---------~~~G~~ls~~~a~l~lrgL~tl~~Rl~~---~~~nA~~La 421 (451)
|.||.++..+ ..|++..++++.+.+-+.. ..+|++.-......++..+.....|+++ -.++++.+.
T Consensus 215 SGHKsmAAs~--PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv 292 (382)
T COG1103 215 SGHKSMAASA--PIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFV 292 (382)
T ss_pred cCccchhccC--CeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998765 5899999999887754322 1345443222222333445555555444 456788888
Q ss_pred HHHHcCCCeE
Q 013019 422 EILEAHPKVL 431 (451)
Q Consensus 422 e~L~~~p~V~ 431 (451)
+.|++..+|+
T Consensus 293 ~elEkigg~~ 302 (382)
T COG1103 293 AELEKIGGVK 302 (382)
T ss_pred HHHHHhhhHH
Confidence 8887765443
No 261
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.53 E-value=1.2e-12 Score=136.37 Aligned_cols=214 Identities=14% Similarity=0.155 Sum_probs=142.8
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc--------CCCeEEEcCCCCcchHHHHHHhhhc------
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETVLPK------ 272 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~--------~GD~VIv~~~~Y~~t~~~l~~~l~~------ 272 (451)
+.++...+|+++|+++.+.+.+++++||++|+..++..... ...+|+..+..|.+........-..
T Consensus 78 ~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~ 157 (406)
T PRK12381 78 YTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQD 157 (406)
T ss_pred cCCHHHHHHHHHHHhhCCCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccC
Confidence 45777889999999998878899999999999999876421 3467888888887743211111000
Q ss_pred C---CcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccc-----ccHHHHHHHHHhcCCEEEEecCCCCC-Ccccc
Q 013019 273 M---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC-----VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKA 343 (451)
Q Consensus 273 ~---Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v-----~DL~~IaelA~~~g~~lVVD~tfa~~-~~~~p 343 (451)
+ .-.+..++..|++++++.+++ ++++|++| |.|++|-+ ..+++|.++|++||+++|+||++... .....
T Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~l~~-~~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~ 235 (406)
T PRK12381 158 FAPLPPDIRHAAYNDLNSASALIDD-QTCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGEL 235 (406)
T ss_pred CCCCCCCeeEeCCCCHHHHHHhccC-CeeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcch
Confidence 0 012344566789999999976 48999997 88888764 24899999999999999999997321 11111
Q ss_pred -----ccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHH--HHHHHHHH
Q 013019 344 -----LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNST 416 (451)
Q Consensus 344 -----l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~--Rl~~~~~n 416 (451)
...-.|+ .+++|.+++ | .+.|++++++++++.+...........++..+..++..|+.+.. .+++..++
T Consensus 236 ~~~~~~~v~pDi--~t~sK~l~g-G-~~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~ 311 (406)
T PRK12381 236 YAYMHYGVTPDV--LTTAKALGG-G-FPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQR 311 (406)
T ss_pred hhhHhhCCCCCE--EEehhhhhC-C-CceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 1122455 578999974 3 46888899999888776432222223466666655555544432 34555566
Q ss_pred HHHHHHHHHc
Q 013019 417 ALRMAEILEA 426 (451)
Q Consensus 417 A~~Lae~L~~ 426 (451)
.+.+.+.|++
T Consensus 312 ~~~l~~~L~~ 321 (406)
T PRK12381 312 HDWFVERLNT 321 (406)
T ss_pred HHHHHHHHHH
Confidence 6666666654
No 262
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.53 E-value=6.4e-13 Score=134.45 Aligned_cols=196 Identities=20% Similarity=0.242 Sum_probs=131.4
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-------CCHHHHHHhhcC----
Q 013019 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNN---- 294 (451)
Q Consensus 226 e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-------~D~d~Le~ai~~---- 294 (451)
+..++++.+++|+.++...|..|||..+++.|.|++.-+-+ -=+.|+++..+.. .+.++||+++++
T Consensus 147 ~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl---~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~ 223 (471)
T KOG0256|consen 147 ERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDL---RWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKL 223 (471)
T ss_pred cceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccc---eeccCceEEEEEeecCCCccccHHHHHHHHHHHHHh
Confidence 45666667779999999999999999999999999853222 2245787766632 257788777753
Q ss_pred -CCeEEEEEeCCCCCccccccH---HHHHHHHHhcCCEEEEecCCCCCCcccc-----c--------cCCCcEEEECCcc
Q 013019 295 -NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQKA-----L--------SLGADLVLHSATK 357 (451)
Q Consensus 295 -~~tklV~lesPsNPtG~v~DL---~~IaelA~~~g~~lVVD~tfa~~~~~~p-----l--------~~GaDiVv~S~SK 357 (451)
.++|.|++.+|+||.|...+- ..+.++|.++|+.||+||.|+.-++.++ + ...-.-++.|+||
T Consensus 224 ~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSK 303 (471)
T KOG0256|consen 224 GLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSK 303 (471)
T ss_pred CCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEecc
Confidence 368999999999999999874 5566677899999999999875433221 1 1112257889999
Q ss_pred cCCccccceeEEEEeCHH-HHHHHHHHhHhhCCCccHHHHHHHHHhhHH-------HHHHHHHHHHHHHHHHHHHHcC
Q 013019 358 FIGGHNDVLAGSISGSGK-LVTQIRNLHHVLGGALNPNAAYLIIRGMKT-------LHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~~e-li~~lr~~~~~~G~~ls~~~a~l~lrgL~t-------l~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
-+|.+| .+.|+|....+ ++...+++. .+|. +++...+++..-|.. +.+.-+|....-+.+.+.|++.
T Consensus 304 D~GlpG-fRvGviYS~ne~VvsaA~kms-sf~~-vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l 378 (471)
T KOG0256|consen 304 DFGLPG-FRVGVIYSNNEDVVSAATKMS-SFGL-VSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL 378 (471)
T ss_pred ccCCCc-eEEEEEEecChHHHHHHHHHh-hccC-CcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc
Confidence 999988 67899988654 555555544 3443 455555544333221 1222333344445566666654
No 263
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.52 E-value=2.8e-14 Score=144.42 Aligned_cols=210 Identities=21% Similarity=0.293 Sum_probs=52.6
Q ss_pred HHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCC---CCcchHHHHHHhhhcCCcEEEEeCC---CCHHH
Q 013019 214 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTD---CYRKTRIFIETVLPKMGITATVIDP---ADMEG 287 (451)
Q Consensus 214 ~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~---~Y~~t~~~l~~~l~~~Gi~v~~vd~---~D~d~ 287 (451)
.+++.++.+.|+++++++++.++|+.+++.++. +|.+||++.. .+|+.++.- .+++.-|..+..+-. ..+++
T Consensus 51 ~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRip-~vm~~sGa~lvEVGttN~t~~~D 128 (367)
T PF03841_consen 51 HVEELLCELTGAEAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRIP-DVMRQSGARLVEVGTTNRTHLSD 128 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccc-cccccccccccccccccccccc-ccccccccccccccccccccccc
Confidence 478889999999999999999999999888775 4778888763 355554432 455556766555533 34789
Q ss_pred HHHhhcCCCeEEEEEeCCCCCccc----cccHHHHHHHHHhcCCEEEEecCCC------------CCCccccccCCCcEE
Q 013019 288 LEAALNNNNVSLFFTESPTNPFLR----CVDVKLVSDLCHKKGAIVCIDGTFA------------TPLNQKALSLGADLV 351 (451)
Q Consensus 288 Le~ai~~~~tklV~lesPsNPtG~----v~DL~~IaelA~~~g~~lVVD~tfa------------~~~~~~pl~~GaDiV 351 (451)
++++|+++ |.+|+--.++|.... ..+++++++++|+||+++++|-.-+ .|-.++.++.|+|+|
T Consensus 129 ye~AI~e~-Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV 207 (367)
T PF03841_consen 129 YEKAITEN-TAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLV 207 (367)
T ss_dssp ---------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEE
T ss_pred cccccccc-ccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEE
Confidence 99999985 888877678887432 3589999999999999999998631 123345577899999
Q ss_pred EECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH----------------HHHHHHHHHHH
Q 013019 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----------------TLHLRVQQQNS 415 (451)
Q Consensus 352 v~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~----------------tl~~Rl~~~~~ 415 (451)
++|..|.++|+. +|+|+|++++++++++....-...++-.....+...|+ .+....+...+
T Consensus 208 ~fSGdKlLGGPQ---aGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~ 284 (367)
T PF03841_consen 208 TFSGDKLLGGPQ---AGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRA 284 (367)
T ss_dssp EEETTSSSSS-S----EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH--------------------------
T ss_pred EEECCCcCCCCC---eEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccc
Confidence 999999999997 89999999999999864433233333333222222222 22333555666
Q ss_pred HHHHHHHHHHcCCC
Q 013019 416 TALRMAEILEAHPK 429 (451)
Q Consensus 416 nA~~Lae~L~~~p~ 429 (451)
.|++|++.|++...
T Consensus 285 rA~~l~~~l~~~~~ 298 (367)
T PF03841_consen 285 RAERLAAQLKAALG 298 (367)
T ss_dssp --------------
T ss_pred cccccccccccccc
Confidence 78888887776544
No 264
>PLN02263 serine decarboxylase
Probab=99.50 E-value=3.3e-12 Score=134.65 Aligned_cols=222 Identities=16% Similarity=0.137 Sum_probs=157.4
Q ss_pred CccccCCCc---hhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHHHHHHhhh
Q 013019 201 SFEYGRYGN---PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLP 271 (451)
Q Consensus 201 ~~~Y~R~~n---pt~~~Lee~LA~l~gae----~~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l~~~l~ 271 (451)
.+.++-|+- ..-.++-+++++++|.+ ..+++++|++++..++.+... +...+++++..|.+.. +.+.
T Consensus 121 p~~~s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~----KAa~ 196 (470)
T PLN02263 121 PFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAAR 196 (470)
T ss_pred ccccCCcchhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHH----HHHH
Confidence 355554422 22334667788888852 378888999999888876543 2346888888887755 4555
Q ss_pred cCCcEEEEeCC-----CCHHHHHHhhcCCC--eEEEEEeCCCCCccccccHHHHHHHHHhcCC-----EEEEecCCCCCC
Q 013019 272 KMGITATVIDP-----ADMEGLEAALNNNN--VSLFFTESPTNPFLRCVDVKLVSDLCHKKGA-----IVCIDGTFATPL 339 (451)
Q Consensus 272 ~~Gi~v~~vd~-----~D~d~Le~ai~~~~--tklV~lesPsNPtG~v~DL~~IaelA~~~g~-----~lVVD~tfa~~~ 339 (451)
.+|++++.++. .|+++|+++|.++. +-+|+...++-++|.+.||++|.++|+++|+ |++||.+|+..+
T Consensus 197 llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~ 276 (470)
T PLN02263 197 MYRMECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLM 276 (470)
T ss_pred hcCCcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhH
Confidence 66777766653 48999999997542 4567777788899999999999999999997 999999986532
Q ss_pred c---cc--cc--cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH--------hhCCCc--cHHHHHHHHH-
Q 013019 340 N---QK--AL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------VLGGAL--NPNAAYLIIR- 401 (451)
Q Consensus 340 ~---~~--pl--~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--------~~G~~l--s~~~a~l~lr- 401 (451)
. .. .+ ..++|-+..+.|||++.+- .+|++..+++.++.+..... ..|... .+...|..++
T Consensus 277 lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~--~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~ 354 (470)
T PLN02263 277 MPFVKRAPKVTFKKPIGSVSVSGHKFVGCPM--PCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR 354 (470)
T ss_pred hhhcccccccCCCcCccEEEECCccccCCCc--CEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHH
Confidence 2 11 11 2248999999999998775 47888877655543322111 122222 2466777665
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHcCC
Q 013019 402 -GMKTLHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 402 -gL~tl~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
|.+.+..++++..++|+.+.+.|++++
T Consensus 355 ~G~~G~~~~i~~~~~~A~~l~~~l~~~g 382 (470)
T PLN02263 355 KGYRGFQKEVQKCLRNAHYLKDRLREAG 382 (470)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 567888999999999999999999874
No 265
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.49 E-value=1.6e-12 Score=146.04 Aligned_cols=217 Identities=14% Similarity=0.138 Sum_probs=151.4
Q ss_pred HHHHHHHHhhhCCCcEEEe-CCHHHHHHHHHHHHcc--------CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 213 VVVEEKMSALEGAESTVIM-ASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 213 ~~Lee~LA~l~gae~~vv~-sSG~aAi~~al~all~--------~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
.+++++|+++.|-+.+-++ ++|+.+..+.++++.. ..+.|+++...|+..... +...|++++.++.
T Consensus 533 ~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPas----a~~~G~~Vv~V~~d 608 (939)
T TIGR00461 533 AQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPAS----AAMAGMQVVPVNCD 608 (939)
T ss_pred HHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHH----HHHCCCEEEEeccC
Confidence 4678999999998765554 4555666655555532 235799999999887643 4556888888764
Q ss_pred ----CCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc-HHHHHHHHHhcCCEEEEecCCCC--CCccccccCCCcEEEE
Q 013019 283 ----ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFAT--PLNQKALSLGADLVLH 353 (451)
Q Consensus 283 ----~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D-L~~IaelA~~~g~~lVVD~tfa~--~~~~~pl~~GaDiVv~ 353 (451)
.|+++|++++++ .++++|++.+|+| +|.+.+ +++|+++||++|.++++|.+... ....+|.++|+|+++.
T Consensus 609 ~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~ 687 (939)
T TIGR00461 609 QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHL 687 (939)
T ss_pred CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEe
Confidence 389999999974 3599999999999 788877 99999999999999999999743 2345677899999999
Q ss_pred CCcccCCccc---cceeEEEEeCHHHHHHHHH--H-h--------HhhCCC--------ccHHHHH--HHHHhhHHHHHH
Q 013019 354 SATKFIGGHN---DVLAGSISGSGKLVTQIRN--L-H--------HVLGGA--------LNPNAAY--LIIRGMKTLHLR 409 (451)
Q Consensus 354 S~SK~l~G~g---dv~gG~Iv~~~eli~~lr~--~-~--------~~~G~~--------ls~~~a~--l~lrgL~tl~~R 409 (451)
|.+|+|+++. .-..|++.+++++...+-. . . ...|.. +-...+| +.+.|-+.+..-
T Consensus 688 s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~ 767 (939)
T TIGR00461 688 NLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKA 767 (939)
T ss_pred cCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHH
Confidence 9999776321 1236899888765443220 0 0 001111 1112233 334455666666
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEEecCC
Q 013019 410 VQQQNSTALRMAEILEAHPKVLLLFITL 437 (451)
Q Consensus 410 l~~~~~nA~~Lae~L~~~p~V~~V~yPg 437 (451)
.+....||.++++.|+++. .+.|++
T Consensus 768 a~~ailnAnYl~~rL~~~~---~~l~~~ 792 (939)
T TIGR00461 768 SVVAILNANYMATRLKDHY---PILFVG 792 (939)
T ss_pred HHHHHHHHHHHHHHhhccC---cccccC
Confidence 6777889999999998864 344554
No 266
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.49 E-value=1.1e-12 Score=132.24 Aligned_cols=210 Identities=19% Similarity=0.219 Sum_probs=154.0
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHH
Q 013019 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~ 287 (451)
-....||++||+|.+.+.+++|+|..-|+...|..|- -||=+|..+...|.+... -.+.-+++-.++..+|++.
T Consensus 216 ~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~----GIrns~v~K~IFrHND~~h 291 (570)
T KOG1360|consen 216 KHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQ----GIRNSRVPKHIFRHNDLDH 291 (570)
T ss_pred chhhhHHHHHHHHhcCcceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHH----HhhhcCCcceeeccCCHHH
Confidence 4467899999999999999999999988888777664 356666665555544332 2344466555567788999
Q ss_pred HHHhhcC---CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc--------cc-ccCCCcEEEECC
Q 013019 288 LEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--------KA-LSLGADLVLHSA 355 (451)
Q Consensus 288 Le~ai~~---~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~--------~p-l~~GaDiVv~S~ 355 (451)
|++.++. ..+|+|-+|+.++..|.+.||++|++++|++|++..+||.++.++.. ++ +-.-.||+..++
T Consensus 292 L~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTL 371 (570)
T KOG1360|consen 292 LEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTL 371 (570)
T ss_pred HHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccch
Confidence 9888864 24799999999999999999999999999999999999997654322 11 112368999999
Q ss_pred cccCCccccceeEEEEeCHHHHHHHHHHhHh--hCCCccHHHHHHHHHh---hHHHH--HHHHHHHHHHHHHHHHHHcC
Q 013019 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRG---MKTLH--LRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 356 SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--~G~~ls~~~a~l~lrg---L~tl~--~Rl~~~~~nA~~Lae~L~~~ 427 (451)
.|.||.- ||||++...+++-+|.+... +...+.|....-++.. |+.-+ ...+++++|.+.+.+.|.+.
T Consensus 372 gKafGcV----GGYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~ 446 (570)
T KOG1360|consen 372 GKAFGCV----GGYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL 446 (570)
T ss_pred hhhcccc----cceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 9999864 79999999999999987643 3456666543333333 33221 12355678888888888764
No 267
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.49 E-value=5.2e-12 Score=135.62 Aligned_cols=203 Identities=17% Similarity=0.132 Sum_probs=135.0
Q ss_pred EEEeCCHHHHHHHHHHHHcc--------------------------CCCeEEEcCCCCcchHHHHHHhhhcCCc---EEE
Q 013019 228 TVIMASGMSASTVMLLALVP--------------------------AGGHIVTTTDCYRKTRIFIETVLPKMGI---TAT 278 (451)
Q Consensus 228 ~vv~sSG~aAi~~al~all~--------------------------~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi---~v~ 278 (451)
.+++++|++|+..++.+... ++.+|++++..|.+..+. +..+|+ .++
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~ka----a~~lglg~~~v~ 237 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKA----ADVLGIGRDNLI 237 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHH----HHHcCCCcccEE
Confidence 67788888888887765321 134688888888876533 334444 455
Q ss_pred EeCC-----CCHHHHHHhhcC---CCeEEEEEe--CCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcccc-----
Q 013019 279 VIDP-----ADMEGLEAALNN---NNVSLFFTE--SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA----- 343 (451)
Q Consensus 279 ~vd~-----~D~d~Le~ai~~---~~tklV~le--sPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~p----- 343 (451)
.++. .|+++|+++|++ .+++.+.+. ..++.+|.+.|+++|+++|+++|++++||.+++.+....+
T Consensus 238 ~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~ 317 (522)
T TIGR03799 238 AIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHL 317 (522)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHH
Confidence 4432 489999998852 124444433 5566899999999999999999999999999886432221
Q ss_pred cc--CCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhh--------------CCC-ccHHHHHHHHHhh--
Q 013019 344 LS--LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL--------------GGA-LNPNAAYLIIRGM-- 403 (451)
Q Consensus 344 l~--~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~--------------G~~-ls~~~a~l~lrgL-- 403 (451)
+. .++|.++.|.||++.++- .+|+++.+ +++.+.+.....++ |+. ......|..++.+
T Consensus 318 l~gle~aDSit~d~HK~l~~P~--g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~ 395 (522)
T TIGR03799 318 LKGIERADSVTIDAHKQLYVPM--GAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGR 395 (522)
T ss_pred hcCchhCCEEEEChhhcCCcCc--ccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhH
Confidence 11 268999999999888775 35777654 55554443211110 111 1122355555543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecC
Q 013019 404 KTLHLRVQQQNSTALRMAEILEAHPKVLLLFIT 436 (451)
Q Consensus 404 ~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yP 436 (451)
+.+...+++..+.++.+++.|+++|+++.+.-|
T Consensus 396 ~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p 428 (522)
T TIGR03799 396 KGYELLIDQSIEKAKYFADLIQQQPDFELVTEP 428 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCC
Confidence 456677888889999999999999988765543
No 268
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.48 E-value=2.8e-12 Score=134.17 Aligned_cols=223 Identities=16% Similarity=0.184 Sum_probs=142.3
Q ss_pred CCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcchHHHHHHh-------h------
Q 013019 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV-------L------ 270 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga-e~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t~~~l~~~-------l------ 270 (451)
+.++...+|.++|+++... +..++++||++|+..++.... ...++||..++.|.+....+... .
T Consensus 85 ~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~ 164 (423)
T TIGR00713 85 APTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSP 164 (423)
T ss_pred CCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCC
Confidence 3567788999999998764 578888999999999887532 24589999999998843221110 0
Q ss_pred ---hcCCcEEEEeCCCCHHHHHHhhcC--CCeEEEEEe-CCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCCCc
Q 013019 271 ---PKMGITATVIDPADMEGLEAALNN--NNVSLFFTE-SPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN 340 (451)
Q Consensus 271 ---~~~Gi~v~~vd~~D~d~Le~ai~~--~~tklV~le-sPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~~~ 340 (451)
...+..+..++..|+++|++++++ .++++|++| .|+| +|.+.+ +++|.++|++||+++|+||++.....
T Consensus 165 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~ 243 (423)
T TIGR00713 165 GVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRV 243 (423)
T ss_pred CCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccccc
Confidence 000111233445689999998862 248999998 6777 787765 78999999999999999999743211
Q ss_pred -----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh---HhhCCCccHHHHHHHHHhhHHHHH--HH
Q 013019 341 -----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPNAAYLIIRGMKTLHL--RV 410 (451)
Q Consensus 341 -----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~---~~~G~~ls~~~a~l~lrgL~tl~~--Rl 410 (451)
........|++ +++|.+++ | ..+|++++++++++.+.... .......++..+..++..|+.+.. .+
T Consensus 244 g~~~~~~~~~~~pDi~--t~sK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~ 319 (423)
T TIGR00713 244 ALGGAQEYFGVEPDLT--TLGKIIGG-G-LPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVY 319 (423)
T ss_pred CcchhHHHhCCCcchh--hhhhhhcC-C-CceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHH
Confidence 11112224654 69999984 4 56899999999988876321 111123566666665555554432 22
Q ss_pred HHHHHHHH----HHHHHHHcCCCeEEEe
Q 013019 411 QQQNSTAL----RMAEILEAHPKVLLLF 434 (451)
Q Consensus 411 ~~~~~nA~----~Lae~L~~~p~V~~V~ 434 (451)
++..+..+ .|.+.+++++.+..|.
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~ 347 (423)
T TIGR00713 320 TELDELAKRLAEGLSEVLEDTGIPHTVN 347 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 33333333 3444455666554443
No 269
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.47 E-value=4.1e-12 Score=134.39 Aligned_cols=218 Identities=21% Similarity=0.184 Sum_probs=149.1
Q ss_pred HHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHccC--------CC------eEEEcCCCCcchHHHHHHhhhcCCcE
Q 013019 214 VVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPA--------GG------HIVTTTDCYRKTRIFIETVLPKMGIT 276 (451)
Q Consensus 214 ~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all~~--------GD------~VIv~~~~Y~~t~~~l~~~l~~~Gi~ 276 (451)
.+-..++++++. ....++++|++|+..++++.... +. +|+++...|.+.. +.+..+|+.
T Consensus 105 ~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~----Kaa~~lG~~ 180 (460)
T COG0076 105 RVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFE----KAARYLGLG 180 (460)
T ss_pred HHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHH----HHHHHhCCC
Confidence 344556667776 24678888889998877654211 11 6899888887755 444555665
Q ss_pred EEEeC------CCCHHHHHHhhcCCCeEE--EEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc---ccccc
Q 013019 277 ATVID------PADMEGLEAALNNNNVSL--FFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---QKALS 345 (451)
Q Consensus 277 v~~vd------~~D~d~Le~ai~~~~tkl--V~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~---~~pl~ 345 (451)
++.+. ..|+++|+++|+++ +.. |+...++-++|.+.||++|+++|++++++++||.+|+..+. .....
T Consensus 181 ~~~v~~~~~~~~id~~~l~~~i~~~-t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~ 259 (460)
T COG0076 181 LRRVPTVPTDYRIDVDALEEAIDEN-TIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR 259 (460)
T ss_pred ceeEEeccCccccCHHHHHHHHHhh-ccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccch
Confidence 54442 24899999999986 554 77778899999999999999999999999999999876432 11111
Q ss_pred ----C-CCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHH-HhHhhCC-----------Cc--cHHHHHHHHH--hh
Q 013019 346 ----L-GADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRN-LHHVLGG-----------AL--NPNAAYLIIR--GM 403 (451)
Q Consensus 346 ----~-GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~-~~~~~G~-----------~l--s~~~a~l~lr--gL 403 (451)
+ ++|-++.++|||+..+- .+|+++.+ ++...++.. ...+++. .. ....+|..++ |.
T Consensus 260 ~~f~l~~vdSIt~d~HK~g~aP~--~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~ 337 (460)
T COG0076 260 WDFGLEGVDSITVDGHKYGLAPI--GCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGR 337 (460)
T ss_pred hhcCCCCceEEEECcccccCCCC--CceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCH
Confidence 1 68999999999987664 36666554 433333332 2222221 11 2344666555 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCC
Q 013019 404 KTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLL 438 (451)
Q Consensus 404 ~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL 438 (451)
+.+...+++..++++.+++.|++.+..+-+.-|.+
T Consensus 338 eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l 372 (460)
T COG0076 338 EGYRKLLDRTLELARYLAEELEKLGDFELVNEPEL 372 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCcc
Confidence 77778889999999999999999876655554544
No 270
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.47 E-value=2e-12 Score=146.95 Aligned_cols=212 Identities=16% Similarity=0.182 Sum_probs=146.1
Q ss_pred HHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHc----cCCC----eEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 213 VVVEEKMSALEGAESTVIMASGM-SASTVMLLALV----PAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 213 ~~Lee~LA~l~gae~~vv~sSG~-aAi~~al~all----~~GD----~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
.+++++|+++.|.+.+-+..+|+ ++..+.++++. ++|| +|++++..|++.... +...|+++++++.
T Consensus 545 ~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~s----a~~~G~~vv~v~~d 620 (954)
T PRK05367 545 DQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPAS----AVMAGMKVVVVACD 620 (954)
T ss_pred HHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHH----HHHCCCEEEEECCC
Confidence 46789999999998777766554 56645444433 5666 599999999886643 4566889888764
Q ss_pred ----CCHHHHHHhhcCC--CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC--CccccccCCCcEEEEC
Q 013019 283 ----ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--LNQKALSLGADLVLHS 354 (451)
Q Consensus 283 ----~D~d~Le~ai~~~--~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~--~~~~pl~~GaDiVv~S 354 (451)
.|+++|+++++++ ++.+|++.+|++..+...|+++|+++||++|+++++|.++... ....|.++|+|+++.|
T Consensus 621 ~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s 700 (954)
T PRK05367 621 ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLN 700 (954)
T ss_pred CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEec
Confidence 3789999999653 4788888888865333468999999999999999999997532 2346678999999999
Q ss_pred CcccCCccc---cceeEEEEeCHHHHHHHHHHh-------HhhCCCc-cHH---------HHHHHHHhhHHHHHHHHHHH
Q 013019 355 ATKFIGGHN---DVLAGSISGSGKLVTQIRNLH-------HVLGGAL-NPN---------AAYLIIRGMKTLHLRVQQQN 414 (451)
Q Consensus 355 ~SK~l~G~g---dv~gG~Iv~~~eli~~lr~~~-------~~~G~~l-s~~---------~a~l~lrgL~tl~~Rl~~~~ 414 (451)
+||+|+++- .-..|++..++.+...+.... ...|... +++ ..|+...|.+.+....++..
T Consensus 701 ~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~ 780 (954)
T PRK05367 701 LHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAI 780 (954)
T ss_pred CcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Confidence 999976332 112577777755443322110 0011111 111 12333456677777778888
Q ss_pred HHHHHHHHHHHcCC
Q 013019 415 STALRMAEILEAHP 428 (451)
Q Consensus 415 ~nA~~Lae~L~~~p 428 (451)
.+|..+++.|+++.
T Consensus 781 ~~A~Yl~~~L~~~~ 794 (954)
T PRK05367 781 LNANYIAKRLKDHY 794 (954)
T ss_pred HHHHHHHHHHHhhc
Confidence 89999999998763
No 271
>PLN02624 ornithine-delta-aminotransferase
Probab=99.46 E-value=5.1e-12 Score=134.56 Aligned_cols=198 Identities=16% Similarity=0.201 Sum_probs=133.7
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc---------CCC-eEEEcCCCCcch-HHHHHHhh----
Q 013019 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AGG-HIVTTTDCYRKT-RIFIETVL---- 270 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~---------~GD-~VIv~~~~Y~~t-~~~l~~~l---- 270 (451)
++.++...+|+++|+++.+.+.+++++||++|+..++..... ++. .|+.....|.+. ...+....
T Consensus 113 ~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~ 192 (474)
T PLN02624 113 AFYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (474)
T ss_pred ccCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccc
Confidence 467888899999999999888899999999999998864332 123 467766666653 22221000
Q ss_pred -hcC---CcEEEEeCCCCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCC-C
Q 013019 271 -PKM---GITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-L 339 (451)
Q Consensus 271 -~~~---Gi~v~~vd~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~-~ 339 (451)
..+ .-.+.+++..|++.+++.++. .++++|++|.++|++|.+.+ +++|.++|++||+++|+||++... .
T Consensus 193 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~Gr 272 (474)
T PLN02624 193 TRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLAR 272 (474)
T ss_pred cccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCc
Confidence 001 112345666789999998852 35899999999999999887 999999999999999999997521 1
Q ss_pred cccc-----ccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHH
Q 013019 340 NQKA-----LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL 406 (451)
Q Consensus 340 ~~~p-----l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl 406 (451)
.... .....|+++ ++|.+++.. ..+|++++++++++.+...........++..+..+...|+.+
T Consensus 273 tG~~~a~~~~~i~pDiv~--lsK~lggG~-~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l 341 (474)
T PLN02624 273 TGKMLACDWEEVRPDVVI--LGKALGGGV-IPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVV 341 (474)
T ss_pred CcchhhHHhcCCCCCEEE--ecccccCCC-CcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHH
Confidence 1111 122356666 579998653 356788888888776653322111134566665555555544
No 272
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.45 E-value=1.2e-12 Score=125.79 Aligned_cols=221 Identities=11% Similarity=0.129 Sum_probs=157.5
Q ss_pred CCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga-e~~vv~sSG~-aAi~~al~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
|.+|-...+...+++--+- .+.++++-|+ +.|.++++..+-|| ++|+...|.|+-.. -.+...++++.-++.
T Consensus 66 ~~d~rnk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~----v~A~iNd~eVvkvpl~ 141 (375)
T KOG0633|consen 66 YPDPRNKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYV----VDAAINDAEVVKVPLN 141 (375)
T ss_pred cCCcccchhhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEE----EEeecCCceEEEecCC
Confidence 4445555555555554332 5678889999 89999999999999 88999999997532 123445677665542
Q ss_pred ----CCHHHHHHhhcCC-CeEEEEEeCCCCCccccccHHHHHHHHHh-cCCEEEEecCCCCCCc-cccc----cCCCcEE
Q 013019 283 ----ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLN-QKAL----SLGADLV 351 (451)
Q Consensus 283 ----~D~d~Le~ai~~~-~tklV~lesPsNPtG~v~DL~~IaelA~~-~g~~lVVD~tfa~~~~-~~pl----~~GaDiV 351 (451)
.|.|++.+.+..+ .+|++|+++|+||||.....+.|.++... -|.++|+||+|..+.. ...+ ++-.-++
T Consensus 142 pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLiv 221 (375)
T KOG0633|consen 142 PDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIV 221 (375)
T ss_pred CCccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceee
Confidence 3688888877643 58999999999999999988888887764 3789999999755322 1111 1223488
Q ss_pred EECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCc-cHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCC
Q 013019 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL-NPNAAYLIIR--GMKTLHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 352 v~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~l-s~~~a~l~lr--gL~tl~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
+.++||.+|..| ++.|+-..+.++++.+...+..+.... ....|..++. .++.++.-.+.+.+...+|...|.+.|
T Consensus 222 lqTlSKsfGLAG-iRvG~~~~~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~ 300 (375)
T KOG0633|consen 222 LQTLSKSFGLAG-IRVGYGAFPLSIAEILNRAKAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVP 300 (375)
T ss_pred hhhhhhhcCcce-eEeecccccHHHHHHHHhccCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 999999998776 778998888888888887776654332 2222222232 456666666777788889999999988
Q ss_pred CeEE
Q 013019 429 KVLL 432 (451)
Q Consensus 429 ~V~~ 432 (451)
.+..
T Consensus 301 ~~~~ 304 (375)
T KOG0633|consen 301 FLND 304 (375)
T ss_pred cccC
Confidence 8766
No 273
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.45 E-value=1.1e-11 Score=127.50 Aligned_cols=219 Identities=14% Similarity=0.097 Sum_probs=133.9
Q ss_pred hhHHHHHHHHHhhh-CC-C-cEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcc-hHHHHHHh-----hhcCCc---
Q 013019 210 PTTVVVEEKMSALE-GA-E-STVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRK-TRIFIETV-----LPKMGI--- 275 (451)
Q Consensus 210 pt~~~Lee~LA~l~-ga-e-~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~-t~~~l~~~-----l~~~Gi--- 275 (451)
+....+++++++.+ +. + .+++++||++|+..++.... ..+++|++.+..|.+ +...+... ...++.
T Consensus 66 ~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~ 145 (375)
T PRK04260 66 LYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVP 145 (375)
T ss_pred ccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCC
Confidence 34455666777644 32 2 25677899999998887653 346778888777665 33322110 011111
Q ss_pred EEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCC-Cccccc---c--
Q 013019 276 TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LNQKAL---S-- 345 (451)
Q Consensus 276 ~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~-~~~~pl---~-- 345 (451)
.+.+.+..|++++++++.+ ++.+|++|.++|++|.+.+ +++|.++|+++|+++|+|+++... ....+. .
T Consensus 146 ~~~~~~~~dl~~l~~~l~~-~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~ 224 (375)
T PRK04260 146 HFSYAIFNDLNSVKALVNK-NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYG 224 (375)
T ss_pred CeEEeCCCCHHHHHHhcCC-CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhC
Confidence 1233345689999998876 4899999999999998765 899999999999999999997421 111111 1
Q ss_pred CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHH--HHHHHHHHHHHH----
Q 013019 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALR---- 419 (451)
Q Consensus 346 ~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~--~Rl~~~~~nA~~---- 419 (451)
...|++ |++|.+++. ...|++++++++.+.+...........++..+..+...|+.+. ..+++..++.++
T Consensus 225 ~~pdi~--t~sK~l~~G--~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~ 300 (375)
T PRK04260 225 IEPDIF--TLAKGLANG--VPVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQ 300 (375)
T ss_pred CCCCEE--EecccccCC--cceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 224644 799999853 4689999999887776532221112235665555555554332 223333333333
Q ss_pred HHHHHHcCCCeEEE
Q 013019 420 MAEILEAHPKVLLL 433 (451)
Q Consensus 420 Lae~L~~~p~V~~V 433 (451)
+.+.+.+++.+..+
T Consensus 301 l~~~~~~~~~~~~~ 314 (375)
T PRK04260 301 LQKALQDKETVTTV 314 (375)
T ss_pred HHHHHhhCCCeeEE
Confidence 44445556555444
No 274
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.43 E-value=3.8e-12 Score=124.46 Aligned_cols=178 Identities=21% Similarity=0.357 Sum_probs=137.9
Q ss_pred CCccccCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHHccCCCeEEEcCCC-CcchHHHH------HHh
Q 013019 200 ASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTTDC-YRKTRIFI------ETV 269 (451)
Q Consensus 200 ~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv---~sSG~aAi~~al~all~~GD~VIv~~~~-Y~~t~~~l------~~~ 269 (451)
.+|.| .+-.++.|++..|+.+|+|.+++ +-||+.||.++|..+++|||+++..... |....+.+ ...
T Consensus 58 tGYGy---dD~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gS 134 (416)
T COG4100 58 TGYGY---DDLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGS 134 (416)
T ss_pred CCCCc---cccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCccc
Confidence 34555 45567789999999999998876 5699999999999999999998765432 33222222 123
Q ss_pred hhcCCcEEEEeCC-----CCHHHHHHhhcCCCeEEEEEeCCC----CCccccccHHHHHHHHHhc--CCEEEEecCCCCC
Q 013019 270 LPKMGITATVIDP-----ADMEGLEAALNNNNVSLFFTESPT----NPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATP 338 (451)
Q Consensus 270 l~~~Gi~v~~vd~-----~D~d~Le~ai~~~~tklV~lesPs----NPtG~v~DL~~IaelA~~~--g~~lVVD~tfa~~ 338 (451)
++.+|+..+-++. .|.+.++.+++++ ||+|.+.-.. -|...+.+|+++.++.++- ++++.|||+|+.+
T Consensus 135 L~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~~-tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEF 213 (416)
T COG4100 135 LKDFGIKYKAVPLTADGKIDIQAVKTAISDR-TKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEF 213 (416)
T ss_pred HHHhCcceeecccccCCcccHHHHHHhcCcc-ceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhh
Confidence 5667787776664 3889999999985 9999986433 3556677889999988874 6999999999987
Q ss_pred Cc-cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHH
Q 013019 339 LN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR 381 (451)
Q Consensus 339 ~~-~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr 381 (451)
+. ..|...|+|++..|+-|--||.---.||+++++++++++..
T Consensus 214 vE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 214 VEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred hhccCccccchhhhccceeeCCCCceeeccceeechHHHHHhhc
Confidence 54 56788899999999999998875556899999999998754
No 275
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.43 E-value=7.4e-12 Score=128.07 Aligned_cols=228 Identities=17% Similarity=0.163 Sum_probs=150.5
Q ss_pred CCCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHHccCC-----CeEEEcCCCCcc-hHHHH--------HHhh
Q 013019 206 RYGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALVPAG-----GHIVTTTDCYRK-TRIFI--------ETVL 270 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~g-ae~~vv~sSG~aAi~~al~all~~G-----D~VIv~~~~Y~~-t~~~l--------~~~l 270 (451)
-|.++...+|.++|+++.+ .+.+++++||++|+.+++....+.+ .+||.....|.+ |...+ .+.+
T Consensus 80 ~~~~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F 159 (404)
T COG4992 80 LFYNEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGF 159 (404)
T ss_pred ccCChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCC
Confidence 3567899999999999996 8889999999999999987654433 268888877765 22111 1111
Q ss_pred hcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCC----C--Cc
Q 013019 271 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----P--LN 340 (451)
Q Consensus 271 ~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~----~--~~ 340 (451)
..+--.+++++..|+++++++|++ +|.+|++|...-..|.+.. ++++.++|++||+++|.||.+.. + +.
T Consensus 160 ~Pl~~g~~~vpfnDi~al~~ai~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA 238 (404)
T COG4992 160 GPLLPGFRHVPFNDIEALEAAIDE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFA 238 (404)
T ss_pred CCCCCCceecCCCCHHHHHHHhcc-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHH
Confidence 111124566788899999999998 4999999998887776653 88999999999999999999642 1 11
Q ss_pred cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHH--HHHHHHHHHH
Q 013019 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTAL 418 (451)
Q Consensus 341 ~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~ 418 (451)
..-...-.||++ +.|.++|. ...|++++++++.+.+....+.....-+|+.+......|+.+.. -+++..+...
T Consensus 239 ~e~~gV~PDI~t--laK~LgGG--~PigA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~ 314 (404)
T COG4992 239 YEHYGVEPDILT--LAKALGGG--FPIGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGE 314 (404)
T ss_pred HHHhCCCCCEEE--eeccccCC--ccceeeEEchhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHH
Confidence 111122347776 79999976 45677777654444433222211122367777766666665432 2344444444
Q ss_pred HHHHHHH----cCCCeEEEecCCC
Q 013019 419 RMAEILE----AHPKVLLLFITLL 438 (451)
Q Consensus 419 ~Lae~L~----~~p~V~~V~yPgL 438 (451)
.+.+.|+ +.|.|+.|+--||
T Consensus 315 ~~~~~L~~l~~~~~~v~~vRG~GL 338 (404)
T COG4992 315 YLLQRLRELKRRYPLVKEVRGRGL 338 (404)
T ss_pred HHHHHHHHHhhcCCceeeeeccee
Confidence 4444444 3456777765554
No 276
>PLN02590 probable tyrosine decarboxylase
Probab=99.42 E-value=3.5e-11 Score=129.45 Aligned_cols=227 Identities=15% Similarity=0.190 Sum_probs=151.1
Q ss_pred ccCCCchhHHHHH----HHHHhhhCCC---------cEEEeCCHHHHHHHHHHHHccC-----C-----C-eEEEcCCCC
Q 013019 204 YGRYGNPTTVVVE----EKMSALEGAE---------STVIMASGMSASTVMLLALVPA-----G-----G-HIVTTTDCY 259 (451)
Q Consensus 204 Y~R~~npt~~~Le----e~LA~l~gae---------~~vv~sSG~aAi~~al~all~~-----G-----D-~VIv~~~~Y 259 (451)
++....|...++| ++|++++|.+ ..+++++|++|+..++.+.... | + .|++++..|
T Consensus 160 ~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH 239 (539)
T PLN02590 160 FTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTH 239 (539)
T ss_pred CCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCch
Confidence 4444556655555 5567777753 2678888999888877654221 1 1 344566666
Q ss_pred cchHHHHHHhhhcCCc---EEEEe--C-----CCCHHHHHHhhcCC-----CeEEEEEeCCCCCccccccHHHHHHHHHh
Q 013019 260 RKTRIFIETVLPKMGI---TATVI--D-----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHK 324 (451)
Q Consensus 260 ~~t~~~l~~~l~~~Gi---~v~~v--d-----~~D~d~Le~ai~~~-----~tklV~lesPsNPtG~v~DL~~IaelA~~ 324 (451)
.+.. +.+..+|+ .++.+ | ..|+++|+++|++. .+-+|+....+-.+|.+.||++|+++|++
T Consensus 240 ~Sv~----KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~ 315 (539)
T PLN02590 240 SSFR----KACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKK 315 (539)
T ss_pred HHHH----HHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHH
Confidence 6544 44444554 23333 3 24899999999642 24567777777889999999999999999
Q ss_pred cCCEEEEecCCCCCCccc----cccC---CCcEEEECCcccCCccccceeEEEEeCH--HHHHHHHHHhHh---------
Q 013019 325 KGAIVCIDGTFATPLNQK----ALSL---GADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRNLHHV--------- 386 (451)
Q Consensus 325 ~g~~lVVD~tfa~~~~~~----pl~~---GaDiVv~S~SK~l~G~gdv~gG~Iv~~~--eli~~lr~~~~~--------- 386 (451)
||+|++||.+|+...... .+.. .+|-+..++|||+..+- .+|++..++ .+.+.+.....+
T Consensus 316 ~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~--~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~ 393 (539)
T PLN02590 316 YGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQ--TCSPLWVKDRYSLIDALKTNPEYLEFKVSKKD 393 (539)
T ss_pred hCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCc--CEEEEEecCHHHHHHHhhcCHHHhCCcccccc
Confidence 999999999998653221 1122 37999999999998775 367666654 233322211111
Q ss_pred -----------hCCCccHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecC
Q 013019 387 -----------LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFIT 436 (451)
Q Consensus 387 -----------~G~~ls~~~a~l~lr--gL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yP 436 (451)
++-....+..|+.++ |.+.+..+++++.+.|+.+++.|+++|.++-+.-|
T Consensus 394 ~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~ 456 (539)
T PLN02590 394 TVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTR 456 (539)
T ss_pred cCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Confidence 112234455677665 56788899999999999999999999987765433
No 277
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.42 E-value=2.1e-12 Score=125.88 Aligned_cols=175 Identities=20% Similarity=0.262 Sum_probs=134.1
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHH-HH
Q 013019 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME-GL 288 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d-~L 288 (451)
.....||.+||++.+.|++++++++-.|+..++-+++.|.|-|+.+...|.+...-+ .++++++ .+|..|++ .+
T Consensus 112 ~iHk~LE~kiAqfh~rED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGi-rLckry~----h~dv~~l~~~l 186 (417)
T KOG1359|consen 112 DIHKLLESKIAQFHGREDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGI-RLCKRYR----HVDVFDLEHCL 186 (417)
T ss_pred HHHHHHHHHHHHHhCCCceEEeccccccchHHHHHhcChhhhhhccccccchhhhhh-HHHhhhc----cchhHHHHHHH
Confidence 456789999999999999999999999999999999999999988887777655444 2334332 23333333 23
Q ss_pred HHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcccc-----ccC----CCcEEEECCcccC
Q 013019 289 EAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA-----LSL----GADLVLHSATKFI 359 (451)
Q Consensus 289 e~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~p-----l~~----GaDiVv~S~SK~l 359 (451)
.++.+- +.++|.....-+..|.+.++++|.++++++|+++++|+++++++...- ..+ .+|++..+++|.+
T Consensus 187 ~~a~k~-r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAl 265 (417)
T KOG1359|consen 187 ISACKM-RLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKAL 265 (417)
T ss_pred HHhhhh-eEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhh
Confidence 333333 478999999999999999999999999999999999999988754321 112 2689999999999
Q ss_pred CccccceeEEEEeCHHHHHHHHHHhH--hhCCCccH
Q 013019 360 GGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNP 393 (451)
Q Consensus 360 ~G~gdv~gG~Iv~~~eli~~lr~~~~--~~G~~ls~ 393 (451)
||.. |||..++..++.-++...+ .+...+.|
T Consensus 266 Gga~---GGyttgp~~li~llrqr~RpylFSnslpp 298 (417)
T KOG1359|consen 266 GGAS---GGYTTGPKPLISLLRQRSRPYLFSNSLPP 298 (417)
T ss_pred cCCC---CCCccCChhHHHHHHhcCCceeecCCCCh
Confidence 9875 9999999999998886443 23344443
No 278
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.41 E-value=8.8e-12 Score=128.88 Aligned_cols=158 Identities=16% Similarity=0.095 Sum_probs=113.6
Q ss_pred hHHHHHHHHHhhhCCC---cEEEeC-CHHHHHHHHHHHHccC-CCeEEEcCCCCcchHHHHHHhhhcCCc-EEEEeCC--
Q 013019 211 TTVVVEEKMSALEGAE---STVIMA-SGMSASTVMLLALVPA-GGHIVTTTDCYRKTRIFIETVLPKMGI-TATVIDP-- 282 (451)
Q Consensus 211 t~~~Lee~LA~l~gae---~~vv~s-SG~aAi~~al~all~~-GD~VIv~~~~Y~~t~~~l~~~l~~~Gi-~v~~vd~-- 282 (451)
..++.++.|++++|.. +.++++ ||+.++..++.+++++ ++.|++ ...|+.. +.....++.|+ +++.+..
T Consensus 49 ~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~--~~~~~~~~~g~~~v~~~~~~~ 125 (378)
T PRK03080 49 LLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSK--WATDVVKQLKLEDPRVLEADY 125 (378)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHH--HHHHHHhhcCCCCceEeccCC
Confidence 3556789999999962 456565 8999999999999875 445554 5566653 22223356677 7776653
Q ss_pred ---CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccC
Q 013019 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFI 359 (451)
Q Consensus 283 ---~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l 359 (451)
.|+++ ++. +++|.+....|.||...|+++|++ |++|+++++|.+.+.+...-.++ .+|+++.|.+|+|
T Consensus 126 g~~~d~~~----i~~--~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~-~iD~~~~s~~K~l 196 (378)
T PRK03080 126 GSLPDLSA----VDF--DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWS-KLDVYTFSWQKVL 196 (378)
T ss_pred CCCCCHhh----cCC--CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHH-HCcEEEEehhhhC
Confidence 24444 332 466888888899999999999999 88999999999976542211112 2799999999999
Q ss_pred CccccceeEEEEeCHHHHHHHHH
Q 013019 360 GGHNDVLAGSISGSGKLVTQIRN 382 (451)
Q Consensus 360 ~G~gdv~gG~Iv~~~eli~~lr~ 382 (451)
+|+. ..|+++.++++++++..
T Consensus 197 ~~P~--G~g~l~v~~~~~~~~~p 217 (378)
T PRK03080 197 GGEG--GHGMAILSPRAVERLES 217 (378)
T ss_pred CCCC--ceEEEEECHHHHHhhhc
Confidence 8843 38999999988877653
No 279
>PLN02880 tyrosine decarboxylase
Probab=99.41 E-value=2.3e-11 Score=130.02 Aligned_cols=215 Identities=13% Similarity=0.143 Sum_probs=143.9
Q ss_pred HHHHHHHhhhCCC---------cEEEeCCHHHHHHHHHHHHcc-----C-----CC-eEEEcCCCCcchHHHHHHhhhcC
Q 013019 214 VVEEKMSALEGAE---------STVIMASGMSASTVMLLALVP-----A-----GG-HIVTTTDCYRKTRIFIETVLPKM 273 (451)
Q Consensus 214 ~Lee~LA~l~gae---------~~vv~sSG~aAi~~al~all~-----~-----GD-~VIv~~~~Y~~t~~~l~~~l~~~ 273 (451)
.+-+++++++|.+ ..+++++|++|+..++.+... . .. .|++++..|.+.. +.+..+
T Consensus 126 ~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~----Kaa~~l 201 (490)
T PLN02880 126 IVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQ----KACQIA 201 (490)
T ss_pred HHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHH----HHHHHc
Confidence 3456677777753 267788888988877765432 1 12 3556777776654 344445
Q ss_pred CcE---EEE--eC-----CCCHHHHHHhhcCC-----CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC
Q 013019 274 GIT---ATV--ID-----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 338 (451)
Q Consensus 274 Gi~---v~~--vd-----~~D~d~Le~ai~~~-----~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~ 338 (451)
|+. ++. +| ..|+++|+++|++. .+-+|+....+-.+|.+.|+++|+++|+++|+|++||.+|+.+
T Consensus 202 Glg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~ 281 (490)
T PLN02880 202 GIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGS 281 (490)
T ss_pred CCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHH
Confidence 552 233 33 24889999988642 2466777777888999999999999999999999999998865
Q ss_pred Cccc-----ccc--CCCcEEEECCcccCCccccceeEEEEeCH-H-HHHHHHHHhHh--------------------hCC
Q 013019 339 LNQK-----ALS--LGADLVLHSATKFIGGHNDVLAGSISGSG-K-LVTQIRNLHHV--------------------LGG 389 (451)
Q Consensus 339 ~~~~-----pl~--~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~-e-li~~lr~~~~~--------------------~G~ 389 (451)
.... .++ .++|.++.++|||+..+- .+|++..++ + +.+.+..-..+ .|.
T Consensus 282 ~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~--~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~r 359 (490)
T PLN02880 282 ACICPEYRHYIDGVEEADSFNMNAHKWFLTNF--DCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGR 359 (490)
T ss_pred HHhCHHHHHHhcCchhcCEEEECchhhcCCCc--cEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCC
Confidence 3221 111 258999999999998875 467777653 2 22222111111 111
Q ss_pred CccHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe
Q 013019 390 ALNPNAAYLII--RGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLF 434 (451)
Q Consensus 390 ~ls~~~a~l~l--rgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~ 434 (451)
.......|+.+ .|.+.+..++++..+.++++++.|+++|+++.+.
T Consensus 360 r~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~ 406 (490)
T PLN02880 360 RFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVT 406 (490)
T ss_pred cccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec
Confidence 22345566554 4678888999999999999999999998766544
No 280
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.40 E-value=3e-11 Score=118.75 Aligned_cols=211 Identities=19% Similarity=0.207 Sum_probs=152.3
Q ss_pred HHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-----CC
Q 013019 213 VVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----AD 284 (451)
Q Consensus 213 ~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-----~D 284 (451)
+++.+-+...+.. ..-++-++|+.+..+++..++.|||.|++....-.+.+ .....+++|++|+.++. ..
T Consensus 53 ~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~r--a~D~~~r~ga~V~~v~~~~G~~~~ 130 (385)
T KOG2862|consen 53 DEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQR--AADCARRYGAEVDVVEADIGQAVP 130 (385)
T ss_pred HHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHH--HHHHHHhhCceeeEEecCcccCcc
Confidence 3445555555553 22345578889999999999999999888654333322 23567899999998853 26
Q ss_pred HHHHHHhhcCCCeEEEEEeCCCCCcccccc-HHHHHHHHHhcCCEEEEecCCCC-CCccccccCCCcEEEECCcccCCcc
Q 013019 285 MEGLEAALNNNNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFIGGH 362 (451)
Q Consensus 285 ~d~Le~ai~~~~tklV~lesPsNPtG~v~D-L~~IaelA~~~g~~lVVD~tfa~-~~~~~pl~~GaDiVv~S~SK~l~G~ 362 (451)
+++|++++.++++++|+++.--.-||...| ++.+.++||+|+++++||..-.- ......-++|+|+......|.++++
T Consensus 131 le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP 210 (385)
T KOG2862|consen 131 LEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAP 210 (385)
T ss_pred HHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCCC
Confidence 899999998888999999988888999999 77888999999999999997432 2233444889999999999999988
Q ss_pred ccceeEEEEeCHHHHHHHHHHhH--------------hhCCC---------cc-----HHHHHHHHHhhHHHHHHHHHHH
Q 013019 363 NDVLAGSISGSGKLVTQIRNLHH--------------VLGGA---------LN-----PNAAYLIIRGMKTLHLRVQQQN 414 (451)
Q Consensus 363 gdv~gG~Iv~~~eli~~lr~~~~--------------~~G~~---------ls-----~~~a~l~lrgL~tl~~Rl~~~~ 414 (451)
. ..+.|..++...++++..+. ++|.. .+ .+.+.+.+-.-+.++.++++|.
T Consensus 211 ~--GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~ 288 (385)
T KOG2862|consen 211 A--GLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHR 288 (385)
T ss_pred C--CcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 35667777777777764332 23322 11 1222333333355777889999
Q ss_pred HHHHHHHHHHHcC
Q 013019 415 STALRMAEILEAH 427 (451)
Q Consensus 415 ~nA~~Lae~L~~~ 427 (451)
++++.+...|+++
T Consensus 289 e~s~~l~~~l~~~ 301 (385)
T KOG2862|consen 289 EMSKWLKLSLEAL 301 (385)
T ss_pred HHHHHHHHHHHHh
Confidence 9999998888875
No 281
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.39 E-value=3.4e-11 Score=125.89 Aligned_cols=228 Identities=17% Similarity=0.136 Sum_probs=143.8
Q ss_pred CCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHHcc----CC-----CeEEEcCCCCcch-HHHHHHh----h-
Q 013019 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALVP----AG-----GHIVTTTDCYRKT-RIFIETV----L- 270 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga-e~~vv~sSG~aAi~~al~all~----~G-----D~VIv~~~~Y~~t-~~~l~~~----l- 270 (451)
+.++...+|.++|.++.+. +...+++||++|+..++..... .| .+|+.....|.+. ...+... .
T Consensus 79 ~~~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~ 158 (408)
T PRK04612 79 FYSAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQ 158 (408)
T ss_pred cCCHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccc
Confidence 4567777888999887643 5677888999999998865432 22 3688888877663 2222110 0
Q ss_pred hcC---CcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc-----HHHHHHHHHhcCCEEEEecCCCCC-Ccc
Q 013019 271 PKM---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD-----VKLVSDLCHKKGAIVCIDGTFATP-LNQ 341 (451)
Q Consensus 271 ~~~---Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D-----L~~IaelA~~~g~~lVVD~tfa~~-~~~ 341 (451)
..+ .-.+.+++..|++.++++++++++.+|++| |.+++|.+.. +++|.++|+++|+++|+||++... ...
T Consensus 159 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~e-P~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G 237 (408)
T PRK04612 159 EGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLE-PIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG 237 (408)
T ss_pred cCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEEC-CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC
Confidence 001 112455677789999999975557777775 6667765543 889999999999999999997531 111
Q ss_pred cc---ccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHH--HHHHHHHH
Q 013019 342 KA---LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNST 416 (451)
Q Consensus 342 ~p---l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~--Rl~~~~~n 416 (451)
.. ...+....+.+++|.+++ | ...|++++++++++.+...........+|..+..++..|+.+.. .+++..+.
T Consensus 238 ~~~a~~~~~~~pdi~t~~K~l~~-G-~piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~ 315 (408)
T PRK04612 238 TLFAHWQEQVTPDIVTLAKALGG-G-FPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQ 315 (408)
T ss_pred chhhhhhcCCCCCEEEEcchhcC-C-CceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 11 123455566779999985 3 46778888888877765432222223467777766666665532 23444444
Q ss_pred HHHHHHHHHc----CCCeEEEecCC
Q 013019 417 ALRMAEILEA----HPKVLLLFITL 437 (451)
Q Consensus 417 A~~Lae~L~~----~p~V~~V~yPg 437 (451)
...+.+.|++ ++.|..|+..|
T Consensus 316 g~~l~~~l~~l~~~~~~i~~vrg~G 340 (408)
T PRK04612 316 SAALRAGLEALNAEFGVFAQVRGRG 340 (408)
T ss_pred HHHHHHHHHHHHhhCCCeeeeeccc
Confidence 5555554433 56666665544
No 282
>PLN00144 acetylornithine transaminase
Probab=99.39 E-value=4.3e-11 Score=124.05 Aligned_cols=225 Identities=13% Similarity=0.125 Sum_probs=143.4
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccC---------------CCeEEEcCCCCcchH-HHHHHhh
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA---------------GGHIVTTTDCYRKTR-IFIETVL 270 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~---------------GD~VIv~~~~Y~~t~-~~l~~~l 270 (451)
+.++...+|.++|+++.+.+.+.+++||++|+..++.....- ..+|+.....|.+.. ..+...-
T Consensus 54 ~~~~~~~~la~~l~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~ 133 (382)
T PLN00144 54 YHTIPQVELAKRLVASSFADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTS 133 (382)
T ss_pred ccCHHHHHHHHHHHhcCCCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCC
Confidence 457778889999998876678888899999999888754210 246888887776632 2221000
Q ss_pred ----h-cCC---cEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccc--c--HHHHHHHHHhcCCEEEEecCCCCC
Q 013019 271 ----P-KMG---ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV--D--VKLVSDLCHKKGAIVCIDGTFATP 338 (451)
Q Consensus 271 ----~-~~G---i~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~--D--L~~IaelA~~~g~~lVVD~tfa~~ 338 (451)
+ .++ -.+.+++..|++++++.+.++++++|++|...||.|... . +++|.++|++||+++|+||++...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~ 213 (382)
T PLN00144 134 KEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGL 213 (382)
T ss_pred CccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 0 010 124556667899999988655689999998888844432 3 889999999999999999996432
Q ss_pred -Ccccc-----ccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHH-----H
Q 013019 339 -LNQKA-----LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL-----H 407 (451)
Q Consensus 339 -~~~~p-----l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl-----~ 407 (451)
....+ ...-.| +.+++|.+++. ..+|++++++++++.+...........+|..+..++..|+.+ .
T Consensus 214 gr~g~~~~~~~~~~~PD--i~t~sK~l~~G--~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~ 289 (382)
T PLN00144 214 GRTGYLWAHEAYGVEPD--IMTLAKPLAGG--LPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFL 289 (382)
T ss_pred CccchHhhhhhcCCCCC--EEEecccccCC--cceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHH
Confidence 11111 122346 66689999864 578999999988887754322222334666665555444333 2
Q ss_pred HHHHHHHHH-HHHHHHHHHcCCCeEEEec
Q 013019 408 LRVQQQNST-ALRMAEILEAHPKVLLLFI 435 (451)
Q Consensus 408 ~Rl~~~~~n-A~~Lae~L~~~p~V~~V~y 435 (451)
.++++..+. .+.+.+.+.++|.+..|..
T Consensus 290 ~~~~~~g~~l~~~l~~~~~~~~~~~~vrg 318 (382)
T PLN00144 290 ASVAKKGEYLRELLRRKLGGNPHVKEVRG 318 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeec
Confidence 233332222 2234445666776666554
No 283
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.39 E-value=3.8e-11 Score=131.88 Aligned_cols=170 Identities=14% Similarity=0.154 Sum_probs=125.4
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC------
Q 013019 210 PTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~------ 282 (451)
-...+.|+..|+++|++.+.++.+|+ .++.+++++++++||.|++++++|-+.+. .+-..|+...++.+
T Consensus 195 G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~----aLilsga~PVYl~P~~n~~G 270 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAH----LLMMSDVVPIWLKPTRNALG 270 (713)
T ss_pred hHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHH----HHHHcCCeeEEecccccccC
Confidence 34567899999999999999999998 78999999999999999999999988664 33445666666542
Q ss_pred ----CC-----HHHHHHhhcCC----CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEE-EEecCCCCCCc-------c
Q 013019 283 ----AD-----MEGLEAALNNN----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV-CIDGTFATPLN-------Q 341 (451)
Q Consensus 283 ----~D-----~d~Le~ai~~~----~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~l-VVD~tfa~~~~-------~ 341 (451)
.+ .+.|+++|+++ +++.+++.+|+ ..|.+.|++.|+++| |+.+ ++|++|+.... .
T Consensus 271 i~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~ 346 (713)
T PRK15399 271 ILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGK 346 (713)
T ss_pred CcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccCCc
Confidence 12 38888888643 23688888885 789999999999999 6766 69999765321 2
Q ss_pred ccccC--CCcEE---EECCcccCCccccceeEEEEeCHHHH-HHHHHHhHhhCC
Q 013019 342 KALSL--GADLV---LHSATKFIGGHNDVLAGSISGSGKLV-TQIRNLHHVLGG 389 (451)
Q Consensus 342 ~pl~~--GaDiV---v~S~SK~l~G~gdv~gG~Iv~~~eli-~~lr~~~~~~G~ 389 (451)
.++.. |+|.+ ++|+||.+++.+ .+.+|-.+..+- ++++.....+.+
T Consensus 347 sam~~~~~aD~~i~~tQStHKtL~alT--QaS~iHvk~~vd~~~~n~a~~m~~S 398 (713)
T PRK15399 347 SGMSGERVPGKVIFETQSTHKMLAAFS--QASLIHIKGEYDEETFNEAFMMHTS 398 (713)
T ss_pred ChhhCCCCCCeeeeeeeehhccccccc--hheeeeecCCCCHHHHHHHHHHHcC
Confidence 23333 57877 999999999876 566665543322 445554444443
No 284
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.39 E-value=1.7e-11 Score=134.71 Aligned_cols=208 Identities=13% Similarity=0.185 Sum_probs=141.7
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC------
Q 013019 210 PTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~------ 282 (451)
-...+.|+..|+++|++.+.++.+|+ .++.+++++++++||.|++++++|-+.+. .+...|+...++.+
T Consensus 195 G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~h----aLilsga~PVYl~P~rn~~G 270 (714)
T PRK15400 195 GPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTH----LMMMSDVTPIYFRPTRNAYG 270 (714)
T ss_pred hHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHH----HHHHcCCeEEEecccccccC
Confidence 34577899999999999999999998 88999999999999999999999988664 33445666666542
Q ss_pred ----CC-----HHHHHHhhcCC-CeE---EEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC------c-cc
Q 013019 283 ----AD-----MEGLEAALNNN-NVS---LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL------N-QK 342 (451)
Q Consensus 283 ----~D-----~d~Le~ai~~~-~tk---lV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~------~-~~ 342 (451)
.+ .+.|+++|+++ +.+ .+++.+|+ ..|.+.|++.|+++|+.++ +++|++|+... . ..
T Consensus 271 i~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~s 347 (714)
T PRK15400 271 ILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKC 347 (714)
T ss_pred CccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCcC
Confidence 13 78899888653 123 68887885 7899999999999999887 78999976532 1 33
Q ss_pred cccCCC---c--EEEECCcccCCccccceeEEEEeCHHH-HHHHHHHhHhhCCCccHHHHHHHHHhhHH---------HH
Q 013019 343 ALSLGA---D--LVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLGGALNPNAAYLIIRGMKT---------LH 407 (451)
Q Consensus 343 pl~~Ga---D--iVv~S~SK~l~G~gdv~gG~Iv~~~el-i~~lr~~~~~~G~~ls~~~a~l~lrgL~t---------l~ 407 (451)
++..|+ | ++++|+||.+++.+ .+.+|-.+..+ .++++.....+.++ ||. |+++.+|+. -.
T Consensus 348 am~~ga~~~~~i~vtQStHKtL~alT--QaS~LHvkg~vd~~~~n~a~~m~~ST-SPs--Y~l~ASLD~a~~~m~~~~G~ 422 (714)
T PRK15400 348 GMSGGRVEGKVIYETQSTHKLLAAFS--QASMIHVKGDVNEETFNEAYMMHTTT-SPH--YGIVASTETAAAMMKGNAGK 422 (714)
T ss_pred hhhcCCCCCCceEEEEchhhcccchh--HHhHHHHcCCCCHHHHHHHHHHHcCC-CcH--HHHHHHHHHHHHHHHhhhhH
Confidence 455677 5 99999999999775 34443322211 13455544444433 221 111111111 11
Q ss_pred HHHHHHHHHHHHHHHHHHcCCC
Q 013019 408 LRVQQQNSTALRMAEILEAHPK 429 (451)
Q Consensus 408 ~Rl~~~~~nA~~Lae~L~~~p~ 429 (451)
..+++..+.+..+.+.|.+.+.
T Consensus 423 ~l~~~~i~~a~~~R~~l~~~~~ 444 (714)
T PRK15400 423 RLINGSIERAIKFRKEIKRLRT 444 (714)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC
Confidence 2244555667777777766554
No 285
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.36 E-value=2.6e-11 Score=123.96 Aligned_cols=185 Identities=23% Similarity=0.330 Sum_probs=131.2
Q ss_pred HHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcC-CCC-cchHHHHHHhhhcCCcEEEEeCC---CCHHHH
Q 013019 214 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTT-DCY-RKTRIFIETVLPKMGITATVIDP---ADMEGL 288 (451)
Q Consensus 214 ~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~-~~Y-~~t~~~l~~~l~~~Gi~v~~vd~---~D~d~L 288 (451)
.+.+.+..+.|++.++++++-++|+..++.++.. +.+|+++. +.- ++.. -+...++.-|.++..+.. ....++
T Consensus 72 ~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~-~~EvVis~g~lV~gg~~-~v~d~~~~aG~~l~EvG~tn~t~~~d~ 149 (395)
T COG1921 72 ELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAE-GKEVVVSRGELVEGGAF-RVPDIIRLAGAKLVEVGTTNRTHLKDY 149 (395)
T ss_pred HHHHHHhcccchhheeeECCcHHHHHHHHhhhcc-CCeEEEEccccccCCCC-ChhHHHHHcCCEEEEecccCcCCHHHH
Confidence 5667777777889999999999999999888876 55666643 111 1111 133456667887776653 368899
Q ss_pred HHhhcCCCeEEEE-EeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC-----CccccccCCCcEEEECCcccCCcc
Q 013019 289 EAALNNNNVSLFF-TESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-----LNQKALSLGADLVLHSATKFIGGH 362 (451)
Q Consensus 289 e~ai~~~~tklV~-lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~-----~~~~pl~~GaDiVv~S~SK~l~G~ 362 (451)
+.+|.++ +++++ +-+.+-+.-...++++++++||++|+++++|.+-+.. -.+..+..|+|+|++|..|.|+|+
T Consensus 150 ~~AIne~-ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGP 228 (395)
T COG1921 150 ELAINEN-TALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGP 228 (395)
T ss_pred HHHhccC-CeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCC
Confidence 9999986 66654 3333322333457888999999999999999986543 334556789999999999999999
Q ss_pred ccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH
Q 013019 363 NDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (451)
Q Consensus 363 gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~ 404 (451)
. +|+|+|+++++++++......+...+...-..+.+.|+
T Consensus 229 q---aGii~GkKelI~~lq~~~l~Ralrv~K~tla~l~~aLe 267 (395)
T COG1921 229 Q---AGIIVGKKELIEKLQSHPLKRALRVDKETLAALEAALE 267 (395)
T ss_pred c---cceEechHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHH
Confidence 6 99999999999998876554454444444333333333
No 286
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.35 E-value=3.2e-11 Score=137.25 Aligned_cols=158 Identities=22% Similarity=0.306 Sum_probs=127.0
Q ss_pred HHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHH-ccC--CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHH
Q 013019 213 VVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (451)
Q Consensus 213 ~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~al-l~~--GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~ 287 (451)
..+++.+++|.|.+ ++-++.+++++..++++++ .++ ||+|++++.+|+.+...+...++..|++++.++..+ +
T Consensus 124 ~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~--d 201 (954)
T PRK05367 124 LNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK--A 201 (954)
T ss_pred HHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--C
Confidence 35688999999974 4577788888777777776 344 489999999999998888777888999999887643 1
Q ss_pred HHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCC-CCCCccccccCCCcEEEECCccc-----CCc
Q 013019 288 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKF-----IGG 361 (451)
Q Consensus 288 Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tf-a~~~~~~pl~~GaDiVv~S~SK~-----l~G 361 (451)
+ ++.++.++++..|+ .+|.+.|+++|+++||++|+++++|... +......|.++|+||++.|.+|| +||
T Consensus 202 ~----~~~~~~~vlvq~p~-~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GG 276 (954)
T PRK05367 202 L----DHDDVFGVLLQYPG-TSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGG 276 (954)
T ss_pred C----CcccEEEEEEecCC-CCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCC
Confidence 1 12247778887774 6999999999999999999999999865 33455678899999999999999 778
Q ss_pred cccceeEEEEeCHHHHHHH
Q 013019 362 HNDVLAGSISGSGKLVTQI 380 (451)
Q Consensus 362 ~gdv~gG~Iv~~~eli~~l 380 (451)
++ +|+++.++++.+++
T Consensus 277 P~---aGflavr~~~~r~l 292 (954)
T PRK05367 277 PH---AAYFAVRDAYKRSM 292 (954)
T ss_pred CC---EEEEEECHHHHhhC
Confidence 86 89999998876654
No 287
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.35 E-value=3.6e-11 Score=134.74 Aligned_cols=147 Identities=16% Similarity=0.209 Sum_probs=115.3
Q ss_pred HHHHHHHHHhhhCCCcEEEeC-CHHHHHHHHHHHHcc-------C-CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 212 TVVVEEKMSALEGAESTVIMA-SGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 212 ~~~Lee~LA~l~gae~~vv~s-SG~aAi~~al~all~-------~-GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
..+|++.|+++.|.+.+-+.. +|+.+.+++++++.. + .++|+++...|+..... +...|+++..++.
T Consensus 545 i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas----a~~~GieVv~Vp~ 620 (954)
T PRK12566 545 IDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS----AQMAGMRVVIVEC 620 (954)
T ss_pred HHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH----HHHCCCEEEEecc
Confidence 457899999999998877776 788777777776542 2 35788999899776532 4456889888764
Q ss_pred -----CCHHHHHHhhcC--CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCC--CCccccccCCCcEEEE
Q 013019 283 -----ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT--PLNQKALSLGADLVLH 353 (451)
Q Consensus 283 -----~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~--~~~~~pl~~GaDiVv~ 353 (451)
.|+++|++.+++ .++.+|.+.+|++-.+...++++|+++||++|+++++|.+... .....|.++|+|+++.
T Consensus 621 D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~ 700 (954)
T PRK12566 621 DPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHM 700 (954)
T ss_pred CCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEe
Confidence 389999999872 2488899988987666666799999999999999999999643 2334567899999999
Q ss_pred CCcccCCcc
Q 013019 354 SATKFIGGH 362 (451)
Q Consensus 354 S~SK~l~G~ 362 (451)
+++|+|+++
T Consensus 701 s~HKtf~~P 709 (954)
T PRK12566 701 NLHKTFCIP 709 (954)
T ss_pred cCCcccCcC
Confidence 999999854
No 288
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.35 E-value=2.6e-11 Score=124.79 Aligned_cols=213 Identities=12% Similarity=0.063 Sum_probs=136.3
Q ss_pred hhHHHHHHHHHhhhCC--C-cEEEe-CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCH
Q 013019 210 PTTVVVEEKMSALEGA--E-STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (451)
Q Consensus 210 pt~~~Lee~LA~l~ga--e-~~vv~-sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~ 285 (451)
...++.++.++++++. + +.+++ +||+.++..++.+++.+ +.+++....|+.............+ ++.+++....
T Consensus 41 ~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~ 118 (361)
T TIGR01366 41 NLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPG 118 (361)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccC-CceEEecCCC
Confidence 4456779999999997 3 24444 55889999999988743 4445555667654443333332333 4455543222
Q ss_pred HHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccc
Q 013019 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDV 365 (451)
Q Consensus 286 d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv 365 (451)
+.++..+.+ ++++|.+..-.|.||.+.|+++| +|++|+++++|.+...+...-..+ .+|+++.|.+|++++++
T Consensus 119 ~~~~~~~~~-~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~-~~D~~~~s~~K~lg~~~-- 191 (361)
T TIGR01366 119 SAPEPQADP-GVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIA-ETDVYYFAPQKNFASDG-- 191 (361)
T ss_pred CCCCCccCC-CCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCCCCHH-HCCEEEEEchhhcCCCC--
Confidence 334444555 49999999999999999999887 588999999999966543221122 27999999999999986
Q ss_pred eeEEEEeCHHHHHHHHHHhH-------hh-----------C---CCccHHHHHHHHHhhHH------HHHHHHHHHHHHH
Q 013019 366 LAGSISGSGKLVTQIRNLHH-------VL-----------G---GALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (451)
Q Consensus 366 ~gG~Iv~~~eli~~lr~~~~-------~~-----------G---~~ls~~~a~l~lrgL~t------l~~Rl~~~~~nA~ 418 (451)
..++++.+++++++++.... .+ + .+++....+.+..+++. +..+.+++.+.++
T Consensus 192 Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~ 271 (361)
T TIGR01366 192 GLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSS 271 (361)
T ss_pred ceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 35566778888777652210 00 1 11122222222333333 3344577778888
Q ss_pred HHHHHHHcCCCeE
Q 013019 419 RMAEILEAHPKVL 431 (451)
Q Consensus 419 ~Lae~L~~~p~V~ 431 (451)
.+.++|++.+.++
T Consensus 272 ~l~~~l~~~~~~~ 284 (361)
T TIGR01366 272 RLYSWAQERPYAT 284 (361)
T ss_pred HHHHHHHhCCCcc
Confidence 8998998887653
No 289
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.34 E-value=3.2e-11 Score=124.70 Aligned_cols=221 Identities=18% Similarity=0.214 Sum_probs=146.5
Q ss_pred CchhHHHHHH----HHHhhhCCC---------cEEEeCCHHHHHHHHHHHHcc--------CC-----C-eEEEcCCCCc
Q 013019 208 GNPTTVVVEE----KMSALEGAE---------STVIMASGMSASTVMLLALVP--------AG-----G-HIVTTTDCYR 260 (451)
Q Consensus 208 ~npt~~~Lee----~LA~l~gae---------~~vv~sSG~aAi~~al~all~--------~G-----D-~VIv~~~~Y~ 260 (451)
..|....+|+ ++++++|.+ ..+++++|++++..++.+... .| . .|++++..|.
T Consensus 73 ~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 152 (373)
T PF00282_consen 73 ASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHY 152 (373)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-T
T ss_pred cccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccccc
Confidence 4577666665 456677754 478888999998888765421 12 2 4777777777
Q ss_pred chHHHHHHhhhcCCcEEEEeCC-----CCHHHHHHhhcCC----C-eEEEEEeCCCCCccccccHHHHHHHHHhcCCEEE
Q 013019 261 KTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNN----N-VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (451)
Q Consensus 261 ~t~~~l~~~l~~~Gi~v~~vd~-----~D~d~Le~ai~~~----~-tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lV 330 (451)
+.. +.+..+|+.++.++. .|+++|+++|++. . +-+|+....+..+|.+.|+++|.++|+++|+|++
T Consensus 153 S~~----Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlH 228 (373)
T PF00282_consen 153 SIE----KAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLH 228 (373)
T ss_dssp HHH----HHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEE
T ss_pred HHH----HhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeee
Confidence 654 555667777777653 3788888887531 1 3366677788889999999999999999999999
Q ss_pred EecCCCCCCc----cccccC---CCcEEEECCcccCCccccceeEEEEeCH-HHHHHHH-HHhHhhC-------------
Q 013019 331 IDGTFATPLN----QKALSL---GADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIR-NLHHVLG------------- 388 (451)
Q Consensus 331 VD~tfa~~~~----~~pl~~---GaDiVv~S~SK~l~G~gdv~gG~Iv~~~-eli~~lr-~~~~~~G------------- 388 (451)
||.+|+.... .+.+.. ++|-+..++||+++.+- .+|++..++ ..+.... ....+++
T Consensus 229 VDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~--~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~ 306 (373)
T PF00282_consen 229 VDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPY--GCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYG 306 (373)
T ss_dssp EEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SS--S-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEE
T ss_pred ecccccccccccccccccccccccccccccchhhhhcCCc--cceeEEeecccchHHHhccChhhhcccccccccccccc
Confidence 9999886322 122222 47999999999999875 467776654 3332211 0000111
Q ss_pred ---CC----ccHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe
Q 013019 389 ---GA----LNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAEILEAHPKVLLLF 434 (451)
Q Consensus 389 ---~~----ls~~~a~l~lr--gL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~ 434 (451)
.. ...+..|+.++ |.+.+..++++..+.++.+++.|+++|.++.+.
T Consensus 307 ~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~ 361 (373)
T PF00282_consen 307 DYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVN 361 (373)
T ss_dssp EGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS
T ss_pred cccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 11 23455676654 678899999999999999999999999977654
No 290
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.34 E-value=8.7e-11 Score=122.24 Aligned_cols=238 Identities=19% Similarity=0.145 Sum_probs=152.8
Q ss_pred cccCCCc-cCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc-CCCeEEEc
Q 013019 178 VNTSAYF-FKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTT 255 (451)
Q Consensus 178 ~~sst~~-~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~-~GD~VIv~ 255 (451)
.+|+|.+ -++.++...+.. ++..|+ ++|+..+||+.+++++|.+.++.+.+|..+...++..+++ +||++++.
T Consensus 46 LrSDTgT~apS~~m~aAM~~---GDD~Y~--gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~ 120 (467)
T TIGR02617 46 LLTDSGTGAVTQSMQAAMMR---GDEAYS--GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLD 120 (467)
T ss_pred CccCCCCCCCCHHHHHHHHc---CCcccc--cCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhccccccccccc
Confidence 4566776 377777666654 344576 8899999999999999999999999999999999988888 78877754
Q ss_pred CC-------C-CcchHHHHHHhhhcCCcEEEEe--------------C-CCCHHHHHHhhcC---CCeEEEEEeCCCCCc
Q 013019 256 TD-------C-YRKTRIFIETVLPKMGITATVI--------------D-PADMEGLEAALNN---NNVSLFFTESPTNPF 309 (451)
Q Consensus 256 ~~-------~-Y~~t~~~l~~~l~~~Gi~v~~v--------------d-~~D~d~Le~ai~~---~~tklV~lesPsNPt 309 (451)
.. . |..+.. .....|+....+ + ..|+++|+++|++ .++-.+.++-.+|-.
T Consensus 121 ~~~~~v~hn~~fett~g----~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~ 196 (467)
T TIGR02617 121 RSKMVAFSNYFFDTTQG----HSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSA 196 (467)
T ss_pred ccccccceEEEEecchH----HHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecC
Confidence 43 2 221221 112234332221 1 2389999999974 223344443334543
Q ss_pred -cccc---cHHHHHHHHHhcCCEEEEecC--C--CC-------CCcccc---c----cCCCcEEEECCcccCCcccccee
Q 013019 310 -LRCV---DVKLVSDLCHKKGAIVCIDGT--F--AT-------PLNQKA---L----SLGADLVLHSATKFIGGHNDVLA 367 (451)
Q Consensus 310 -G~v~---DL~~IaelA~~~g~~lVVD~t--f--a~-------~~~~~p---l----~~GaDiVv~S~SK~l~G~gdv~g 367 (451)
|.+. .++++.++|++||+.++.|.+ + +. .+...+ + -..+|.+..|++|-++.+ +|
T Consensus 197 GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgAp---vG 273 (467)
T TIGR02617 197 GGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVP---MG 273 (467)
T ss_pred CCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCc---cc
Confidence 5555 478899999999999999997 2 11 111111 1 135899999999999987 58
Q ss_pred EEEEeCHH----HHHHHHHHhHh-----hCCCccHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHcC
Q 013019 368 GSISGSGK----LVTQIRNLHHV-----LGGALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 368 G~Iv~~~e----li~~lr~~~~~-----~G~~ls~~~a~l~lrgL~tl--~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
|+++++++ +.++++..... .-+.++..+...+..||+.. ...+.......+.|.+.|.+.
T Consensus 274 g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~ 344 (467)
T TIGR02617 274 GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEI 344 (467)
T ss_pred ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhC
Confidence 99998764 33444432211 11245555555555566542 223444455677888888765
No 291
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.31 E-value=7.9e-12 Score=127.87 Aligned_cols=210 Identities=20% Similarity=0.243 Sum_probs=165.5
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHH
Q 013019 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLE 289 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le 289 (451)
....++|+.+|++.|.+++++|+-|-+.+...+.+++.+|.-|+.....|.+.. .-++.-|..++....+|.++||
T Consensus 182 ~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~----~GaRLSgAtiRVfkHNdm~~LE 257 (519)
T KOG1357|consen 182 EEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSLLGKGSLIISDELNHASLI----TGARLSGATTRVFRHNDMQGLE 257 (519)
T ss_pred HHHHHHHHHHHHhcCCcceEEEeccccccccCcceeecCCcceeeccccchhee----ccccccCceEEEEecCCHHHHH
Confidence 456789999999999999999999999998999999999999988887777643 3345568888888888888888
Q ss_pred HhhcCC------------CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc----------ccccCC
Q 013019 290 AALNNN------------NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----------KALSLG 347 (451)
Q Consensus 290 ~ai~~~------------~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~----------~pl~~G 347 (451)
+.+++. +.-+|+.|...+.-|.+.++.++.++++++.+.++.||++..+... .+-...
T Consensus 258 r~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~d 337 (519)
T KOG1357|consen 258 RLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPED 337 (519)
T ss_pred HHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchh
Confidence 887531 2347788888889999999999999999999999999997543221 111223
Q ss_pred CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh--HhhCCCccHHHHHHHHHhhHHH---------HHHHHHHHHH
Q 013019 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---------HLRVQQQNST 416 (451)
Q Consensus 348 aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~--~~~G~~ls~~~a~l~lrgL~tl---------~~Rl~~~~~n 416 (451)
+||.+..++|.++.. ||++.+++++++.++... ...+..++|..+...+.+++.+ .+++++..+|
T Consensus 338 vDImMGtftKSfga~----GGyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~n 413 (519)
T KOG1357|consen 338 VDIMMGTFTKSFGAA----GGYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAEN 413 (519)
T ss_pred heeecceehhhcccc----cceecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhh
Confidence 689999999999876 699999999999887543 2345667787777777777654 4667888888
Q ss_pred HHHHHHHHHcC
Q 013019 417 ALRMAEILEAH 427 (451)
Q Consensus 417 A~~Lae~L~~~ 427 (451)
...+...|++.
T Consensus 414 s~yfr~~l~~~ 424 (519)
T KOG1357|consen 414 SRYFRWELQKM 424 (519)
T ss_pred hHHHHHhhhcC
Confidence 88887777654
No 292
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.31 E-value=1.9e-10 Score=118.63 Aligned_cols=221 Identities=17% Similarity=0.069 Sum_probs=141.9
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc-cCC-CeEEEcCCCCcchH-HHHHH--------hhhcCC
Q 013019 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV-PAG-GHIVTTTDCYRKTR-IFIET--------VLPKMG 274 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all-~~G-D~VIv~~~~Y~~t~-~~l~~--------~l~~~G 274 (451)
.+.++...+|+++|+++.+.+.+++++||++|+..++.... .+| ++||..+..|.+.. ..+.. .+...-
T Consensus 62 ~~~~~~~~~la~~l~~~~~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~ 141 (364)
T PRK04013 62 MFEHEEKEEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLV 141 (364)
T ss_pred CcCCHHHHHHHHHHHhhcCCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCC
Confidence 46788889999999999887888999999999999987553 345 78999988887743 22210 011111
Q ss_pred cEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccc-cc---HHHHHHHHHhcCCEEEEecCCCCC-----Ccccccc
Q 013019 275 ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC-VD---VKLVSDLCHKKGAIVCIDGTFATP-----LNQKALS 345 (451)
Q Consensus 275 i~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v-~D---L~~IaelA~~~g~~lVVD~tfa~~-----~~~~pl~ 345 (451)
..+..++..|++.+++.+.+ ++++|++|......|.. .| +++|.++|++||+++|+||++... ....-..
T Consensus 142 ~~~~~~~~~d~~~l~~~i~~-~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~g 220 (364)
T PRK04013 142 PGFKHIPFNDVEAAKEAITK-ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYK 220 (364)
T ss_pred CCcEEecCCCHHHHHHHhcC-CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhcC
Confidence 23445566788999999976 49999999776544443 45 899999999999999999985421 1112223
Q ss_pred CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 013019 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILE 425 (451)
Q Consensus 346 ~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~ 425 (451)
.-.|+++ +.|.+++. ...|.++.++++. ..........+|..+..++..|+.+... ...++++++.+.|.
T Consensus 221 v~PDiv~--~gK~lggG--~P~~a~~~~~~~~----~~~~~~T~~gnp~~~aaa~a~l~~i~~~--~l~~~~~~~l~~l~ 290 (364)
T PRK04013 221 VEPDIVT--MGKGIGNG--VPVSLTLTNFDVE----RGKHGSTFGGNPLACKAVAVTLRILRRE--RLVEKAGEKFIEIK 290 (364)
T ss_pred CCCCEEE--ecccccCC--ceeEEEEeccccc----CCCcCCCCCcCHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHhc
Confidence 3457777 69999874 4456666665541 1111111234677777666666665432 23333333333342
Q ss_pred cCCCeEEEecCCC
Q 013019 426 AHPKVLLLFITLL 438 (451)
Q Consensus 426 ~~p~V~~V~yPgL 438 (451)
+|.|..|+.-||
T Consensus 291 -~~~v~~vRG~Gl 302 (364)
T PRK04013 291 -GERVVTTRGRGL 302 (364)
T ss_pred -cCcceeeeeCcE
Confidence 366666665543
No 293
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.30 E-value=2.5e-10 Score=118.95 Aligned_cols=210 Identities=13% Similarity=0.094 Sum_probs=133.8
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc------CC-CeEEEcCCCCcc-hHHHHHHhhhcC-----
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP------AG-GHIVTTTDCYRK-TRIFIETVLPKM----- 273 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~------~G-D~VIv~~~~Y~~-t~~~l~~~l~~~----- 273 (451)
+.++...+|.++|.+..+.+.+++++||++|+..++..... +| ++||+.+..|.+ +...+.. ....
T Consensus 75 ~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~-s~~~~~~~~ 153 (395)
T PRK03715 75 FYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSA-SGKPGWDTI 153 (395)
T ss_pred ccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhh-cCCcccccC
Confidence 44566677777777765567899999999999999876642 23 567777776655 3332211 1100
Q ss_pred ----CcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCC------C
Q 013019 274 ----GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------L 339 (451)
Q Consensus 274 ----Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~------~ 339 (451)
-..+..++..|++++++.+.+ ++.+|++|...+..|...+ +++|.++|++||+++|+||++... +
T Consensus 154 ~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~ 232 (395)
T PRK03715 154 FAPQVPGFPKAELNDIASVEKLITD-KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLF 232 (395)
T ss_pred CCCCCCCceeeCCchHHHHHHHcCC-CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchh
Confidence 001222344688999999976 4899999987777777766 999999999999999999996521 1
Q ss_pred ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCC--CccHHHHHHHHHhhHHHHH--HHHHHHH
Q 013019 340 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNAAYLIIRGMKTLHL--RVQQQNS 415 (451)
Q Consensus 340 ~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~--~ls~~~a~l~lrgL~tl~~--Rl~~~~~ 415 (451)
..+-.....||++ ++|.+++. ..+|.+++++++..... ...+. ..+|..+..++..|+.+.. .+++..+
T Consensus 233 a~~~~gv~PDi~t--~gK~lg~G--~p~~av~~~~~i~~~~~---~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~ 305 (395)
T PRK03715 233 AYELSGIEPDIMT--LGKGIGGG--VPLAALLAKAEVAVFEA---GDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRA 305 (395)
T ss_pred hHhhcCCCCceee--ehhhhhCC--cceEEEEEccccccccC---CCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 1122223457765 67999873 34677777777642111 11111 2356666666656655532 3455556
Q ss_pred HHHHHHHHHH
Q 013019 416 TALRMAEILE 425 (451)
Q Consensus 416 nA~~Lae~L~ 425 (451)
....+.+.|+
T Consensus 306 ~g~~l~~~L~ 315 (395)
T PRK03715 306 RGEYLKEKLL 315 (395)
T ss_pred HHHHHHHHHH
Confidence 6666666665
No 294
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.30 E-value=6.3e-11 Score=121.46 Aligned_cols=205 Identities=11% Similarity=0.068 Sum_probs=132.5
Q ss_pred hhHHHHHHHHHhhhCC--Cc-EEEeCC-HHHHHHHHHHHHcc---CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 210 PTTVVVEEKMSALEGA--ES-TVIMAS-GMSASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~ga--e~-~vv~sS-G~aAi~~al~all~---~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
...++.++.+++++|+ ++ ++++++ |++++.+++..+++ +||+|++. .|+ ..+...+++.|+++++++.
T Consensus 44 ~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~g--~~~---~~~~~~a~~~g~~~~~~~~ 118 (355)
T cd00611 44 AIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVTG--AWS---AKAAKEAKRYGGVVVIVAA 118 (355)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECC--HHH---HHHHHHHHhcCCCcEEEec
Confidence 3466789999999995 33 455544 88999999999987 56666551 222 1122355777888887653
Q ss_pred C------C-HHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEEC
Q 013019 283 A------D-MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (451)
Q Consensus 283 ~------D-~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S 354 (451)
. + ++..+..+++ ++++|.+..-.|.||...+ ++++.+|++++||.+.+.+. ..+.-++ |+++.|
T Consensus 119 ~~~g~~~~~~~~~~~~~~~-~~~lV~~~h~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~~idv~~~--~~~~ss 190 (355)
T cd00611 119 KEEGKYTKIPDVETWDLAP-DAAYVHYCSNETIHGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVSKF--GVIYAG 190 (355)
T ss_pred ccccCCCCCCCHhhcCCCC-CCCEEEEeCCcccccEEcc-----eecccCCCeEEEEccccccCCCCCHHHh--CEEEee
Confidence 2 3 3333344555 5999999888899998733 45556999999999976542 2222233 356677
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHH-------hH--h---hCCCccHHHHHHHHHhhHH------HHHHHHHHHHH
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HH--V---LGGALNPNAAYLIIRGMKT------LHLRVQQQNST 416 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~-------~~--~---~G~~ls~~~a~l~lrgL~t------l~~Rl~~~~~n 416 (451)
.+|.+|.+| .|+++.++++++++... .. . ...+++-...+.+..+++. ++.+.+++.+.
T Consensus 191 ~~K~lGP~G---~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l 267 (355)
T cd00611 191 AQKNLGPAG---VTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQK 267 (355)
T ss_pred cccccCCCc---eEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999998776 78888998887765431 10 0 0123333334444444443 33445666778
Q ss_pred HHHHHHHHHcCCCe
Q 013019 417 ALRMAEILEAHPKV 430 (451)
Q Consensus 417 A~~Lae~L~~~p~V 430 (451)
++.+.++|++.|++
T Consensus 268 ~~~l~~~l~~~~gl 281 (355)
T cd00611 268 AQLLYDTIDNSNGF 281 (355)
T ss_pred HHHHHHHHHhCccc
Confidence 88888899988764
No 295
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.28 E-value=3.6e-10 Score=115.89 Aligned_cols=205 Identities=12% Similarity=0.062 Sum_probs=137.7
Q ss_pred hhHHHHHHHHHhhhCC-C--cEEEe-CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC----
Q 013019 210 PTTVVVEEKMSALEGA-E--STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID---- 281 (451)
Q Consensus 210 pt~~~Lee~LA~l~ga-e--~~vv~-sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd---- 281 (451)
...+.+++.|+++++. + +++++ +||+.|+.+++..++++||++++....+.+.+ +..+++++|+ +..+.
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r--~~~~a~~~g~-~~~~~~~~~ 113 (349)
T TIGR01364 37 AVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKK--AAKEAKKYGV-VNVVASGKE 113 (349)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCC-cEEEecccc
Confidence 4466789999999995 2 35566 45889999999999999999877665554433 3466777787 44433
Q ss_pred -----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEECC
Q 013019 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSA 355 (451)
Q Consensus 282 -----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S~ 355 (451)
..++++++ +++ ++++|.+..-.+.||...+ ++++.++++++||.+.+.+. ..+.-+ .|+++.|.
T Consensus 114 ~~~~~~~~~~~~~--~~~-~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~id~~~--~d~~~~ss 183 (349)
T TIGR01364 114 GNYTKIPDPSTWE--ISE-DAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPIDVSK--FGLIYAGA 183 (349)
T ss_pred CCCCCCCCHHhcC--CCC-CCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCccCCHHH--ccEEEEec
Confidence 23455444 334 4889988777778898765 67777899999999965432 222223 35999999
Q ss_pred cccCCccccceeEEEEeCHHHHHHHHHH-------hHhh--C---CCccHHHHHHHHHhhHH------HHHHHHHHHHHH
Q 013019 356 TKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVL--G---GALNPNAAYLIIRGMKT------LHLRVQQQNSTA 417 (451)
Q Consensus 356 SK~l~G~gdv~gG~Iv~~~eli~~lr~~-------~~~~--G---~~ls~~~a~l~lrgL~t------l~~Rl~~~~~nA 417 (451)
+|.++.+| .|+++.++++++++... .... + .+.+-...+.+..+|+. ++.+.+++.+.+
T Consensus 184 qK~lgP~G---lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~ 260 (349)
T TIGR01364 184 QKNIGPAG---LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKA 260 (349)
T ss_pred ccccCCCc---eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 99998776 78999999888765321 1001 1 12333333333333332 455567777888
Q ss_pred HHHHHHHHcCCCe
Q 013019 418 LRMAEILEAHPKV 430 (451)
Q Consensus 418 ~~Lae~L~~~p~V 430 (451)
+.+.++|++.|++
T Consensus 261 ~~l~~~l~~~~gl 273 (349)
T TIGR01364 261 QLLYDTIDNSNGF 273 (349)
T ss_pred HHHHHHHHhCCCe
Confidence 9999999998763
No 296
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.28 E-value=2.8e-10 Score=119.56 Aligned_cols=223 Identities=19% Similarity=0.213 Sum_probs=143.4
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHHHHHHh-------hh-c--C
Q 013019 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV-------LP-K--M 273 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~-gae~~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l~~~-------l~-~--~ 273 (451)
+.++....|.++|+++. +.+.+++++||++|+..++..... .+++||..++.|.+........ .. . -
T Consensus 87 ~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 166 (426)
T PRK00062 87 APTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSP 166 (426)
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCC
Confidence 45677788999999876 356788889999999999886543 2678999999988853221111 00 0 0
Q ss_pred Cc------EEEEeCCCCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCCCc-
Q 013019 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN- 340 (451)
Q Consensus 274 Gi------~v~~vd~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~~~- 340 (451)
+. ....++..|++++++.+++ .++.+|++|...+..|.+.+ +++|.++|++||+++|+||++.....
T Consensus 167 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g 246 (426)
T PRK00062 167 GVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVA 246 (426)
T ss_pred CCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccC
Confidence 11 1222344688999888853 25889999966666888877 89999999999999999999752211
Q ss_pred ----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh---HhhCCCccHHHHHHHHHhhHHHHH--HHH
Q 013019 341 ----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPNAAYLIIRGMKTLHL--RVQ 411 (451)
Q Consensus 341 ----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~---~~~G~~ls~~~a~l~lrgL~tl~~--Rl~ 411 (451)
...+....|+ .+++|.+++. ..+|++++++++++.++... .......++..+..++..|+.+.. ..+
T Consensus 247 ~~~~~~~~~~~pDi--~~~gK~l~~G--~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~ 322 (426)
T PRK00062 247 LGGAQGYYGVTPDL--TTLGKIIGGG--LPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYE 322 (426)
T ss_pred CccHHHHhCCCcch--HhhhhHhhCC--CcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHH
Confidence 1111112354 5689999853 34677888888888875321 111224567766666666665543 344
Q ss_pred HHHHHHHHHHHHHH----cCCCeEEE
Q 013019 412 QQNSTALRMAEILE----AHPKVLLL 433 (451)
Q Consensus 412 ~~~~nA~~Lae~L~----~~p~V~~V 433 (451)
+..+....+.+.|+ +++.+..+
T Consensus 323 ~~~~~~~~~~~~l~~~~~~~~~~~~v 348 (426)
T PRK00062 323 ELEALTKRLAEGLKEAAKKAGIPLTV 348 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEE
Confidence 55555555555554 45654433
No 297
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.28 E-value=1.5e-10 Score=123.04 Aligned_cols=155 Identities=23% Similarity=0.321 Sum_probs=120.9
Q ss_pred HHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC---------
Q 013019 212 TVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--------- 281 (451)
Q Consensus 212 ~~~Lee~LA~l~gae~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd--------- 281 (451)
..+.++..|+.+|+++..++.+|+ .|+..++++++++||.|++++++|-+....+ -..|....++.
T Consensus 72 i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~gl----ilaGa~Pvyl~p~~np~~gi 147 (557)
T COG1982 72 IKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGL----ILAGATPVYLEPSRNPLYGI 147 (557)
T ss_pred HHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHH----HHcCCceEEecCCCCccccc
Confidence 567899999999999999998998 8999999999999999999999998865432 22344444432
Q ss_pred --CCCHHHHHHhhcCC-Ce-EEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC------CccccccCCCcEE
Q 013019 282 --PADMEGLEAALNNN-NV-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP------LNQKALSLGADLV 351 (451)
Q Consensus 282 --~~D~d~Le~ai~~~-~t-klV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~------~~~~pl~~GaDiV 351 (451)
..+.+.+++++.++ .. |++++.+|+ ..|.+.|+++|.+.+++.++|+.+|++.... ......+.|+|++
T Consensus 148 ~ggI~~~~~~~~l~~~~~~~k~~vitnpT-YdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~ 226 (557)
T COG1982 148 IGGIPLETFKEALLAHPDAEKLAVITNPT-YDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADFV 226 (557)
T ss_pred cCCCCHHHHHHHHHhChhhheeEEEecCc-cceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceEE
Confidence 23678888877543 24 788887776 6799999999999999999999999995432 1222344689999
Q ss_pred EECCcccCCccccceeEEEEeC
Q 013019 352 LHSATKFIGGHNDVLAGSISGS 373 (451)
Q Consensus 352 v~S~SK~l~G~gdv~gG~Iv~~ 373 (451)
++|.||.+++.+ .+-+|-.+
T Consensus 227 tqS~HK~l~alS--QaS~iHv~ 246 (557)
T COG1982 227 TQSTHKLLAALS--QASMIHVK 246 (557)
T ss_pred Eechhhhhhhhh--hhHHHhhC
Confidence 999999999876 45555554
No 298
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.28 E-value=6.5e-10 Score=117.40 Aligned_cols=229 Identities=14% Similarity=0.150 Sum_probs=143.0
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc----CC-CeEEEcCCCCcch-HHHHHHh----h-hcC
Q 013019 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP----AG-GHIVTTTDCYRKT-RIFIETV----L-PKM 273 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~----~G-D~VIv~~~~Y~~t-~~~l~~~----l-~~~ 273 (451)
+.+|...+|.++|+++... +.+++++||++|+..++..... .| .+||.....|.+. ...+... . ..+
T Consensus 114 ~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~ 193 (442)
T TIGR03372 114 LLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPF 193 (442)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCC
Confidence 3578888899999988753 4567778999999998874432 23 5688888777663 2222110 0 111
Q ss_pred ---CcEEEEeCCCCHHHHHHhhcC-----CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCC----
Q 013019 274 ---GITATVIDPADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT---- 337 (451)
Q Consensus 274 ---Gi~v~~vd~~D~d~Le~ai~~-----~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~---- 337 (451)
.-.+..++..|.+++++.++. .++.+|++|.....-|.+.+ +++|.++|++||+++|+||++..
T Consensus 194 ~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt 273 (442)
T TIGR03372 194 MPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRT 273 (442)
T ss_pred CCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcc
Confidence 112455667788888777741 35899999988877787777 99999999999999999999632
Q ss_pred C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCc--cHHHHHHHHHhhHHHHHH--HH
Q 013019 338 P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLR--VQ 411 (451)
Q Consensus 338 ~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~l--s~~~a~l~lrgL~tl~~R--l~ 411 (451)
+ +..+-...-.||++ ++|.+++.- ...|.+++++++.+.+.......+.+. +|..+..++..|+.+... ++
T Consensus 274 G~~~a~e~~gv~PDivt--~gK~lg~G~-~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~ 350 (442)
T TIGR03372 274 GKMFACEHEGVQPDILC--LAKALGGGV-MPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPA 350 (442)
T ss_pred ccchhhhhcCCCCCeee--ehhhhcCCc-ccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 1 11111222358876 899998631 125666778888777632111223333 677766666666655321 23
Q ss_pred HHHHHHHHHHHHHH----cCC-CeEEEecCCC
Q 013019 412 QQNSTALRMAEILE----AHP-KVLLLFITLL 438 (451)
Q Consensus 412 ~~~~nA~~Lae~L~----~~p-~V~~V~yPgL 438 (451)
+..+...++.+.|+ ++| .|..|+..|+
T Consensus 351 ~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl 382 (442)
T TIGR03372 351 QAAIKGDFLLDGFQQLAAEYPDLIIEARGKGL 382 (442)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEEecceE
Confidence 33344444444443 466 5666655443
No 299
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.28 E-value=4.8e-10 Score=117.98 Aligned_cols=230 Identities=16% Similarity=0.107 Sum_probs=138.2
Q ss_pred CCCchhHHHHHHHHHhhh-CC-CcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcc-hHHHHHHhh-----hc-CC
Q 013019 206 RYGNPTTVVVEEKMSALE-GA-ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRK-TRIFIETVL-----PK-MG 274 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~-ga-e~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~-t~~~l~~~l-----~~-~G 274 (451)
.+.++...+|.++|+++. +. +..++++||++|+..++.... ....+|+..+..|.+ +...+.... .. ++
T Consensus 82 ~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 161 (433)
T PRK08117 82 VIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQ 161 (433)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCC
Confidence 456788899999999998 33 444555899999999887532 123567777776665 332221100 00 00
Q ss_pred ---cEEEEeCC-----------------CCHHHHHHhhc----CCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcC
Q 013019 275 ---ITATVIDP-----------------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKG 326 (451)
Q Consensus 275 ---i~v~~vd~-----------------~D~d~Le~ai~----~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g 326 (451)
-.+.+++. .+++++++.++ .+++.+|++|......|.+.+ +++|.++|++||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g 241 (433)
T PRK08117 162 PLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHG 241 (433)
T ss_pred CCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcC
Confidence 01122221 14556666653 235889999988887888877 999999999999
Q ss_pred CEEEEecCCCCC-Ccccc---ccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHh
Q 013019 327 AIVCIDGTFATP-LNQKA---LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (451)
Q Consensus 327 ~~lVVD~tfa~~-~~~~p---l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrg 402 (451)
+++|+||++... ..... ..+|.+.-+.+++|.+++ | ...|++++++++++.+...........+|..+..++..
T Consensus 242 ~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg~-G-~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~ 319 (433)
T PRK08117 242 ILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIAS-G-LPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALAT 319 (433)
T ss_pred CEEEEecchhccCccccchhHhhcCCCCCEeehhhhccC-C-CcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHH
Confidence 999999997631 11111 122432224689999985 3 56788899998887764322211123467776666666
Q ss_pred hHHHHH--HHHHHHHHHHHHHHHHH----cCCCeEEEecCC
Q 013019 403 MKTLHL--RVQQQNSTALRMAEILE----AHPKVLLLFITL 437 (451)
Q Consensus 403 L~tl~~--Rl~~~~~nA~~Lae~L~----~~p~V~~V~yPg 437 (451)
|+.+.. .+++..+....+.+.|+ +++.+..|...|
T Consensus 320 L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G 360 (433)
T PRK08117 320 LEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIG 360 (433)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCC
Confidence 665432 23344444444544443 355554444333
No 300
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.28 E-value=5.5e-10 Score=117.29 Aligned_cols=230 Identities=13% Similarity=0.131 Sum_probs=137.6
Q ss_pred CCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcchHHHHHHh-hh----cCC--
Q 013019 207 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV-LP----KMG-- 274 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t~~~l~~~-l~----~~G-- 274 (451)
+.++...+|.++|.++.+. +..++++||++|+..++.... ....+||...+.|.+........ .. ..|
T Consensus 81 ~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~ 160 (425)
T PRK08088 81 LAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMG 160 (425)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCC
Confidence 4567777888999887653 477888999998888776432 22345666688887744332221 10 001
Q ss_pred -----cEEEEeC--CC------CHHHHHHhhc----CCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEec
Q 013019 275 -----ITATVID--PA------DMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDG 333 (451)
Q Consensus 275 -----i~v~~vd--~~------D~d~Le~ai~----~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~ 333 (451)
+....++ .. ++++|+++++ .+++.+|++|...+.-|.+.. +++|.++|+++|+++|+||
T Consensus 161 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~De 240 (425)
T PRK08088 161 LMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADE 240 (425)
T ss_pred CCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1100011 11 1556888775 235889999876654454443 8899999999999999999
Q ss_pred CCCCC-Ccccc--c-cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHH--
Q 013019 334 TFATP-LNQKA--L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH-- 407 (451)
Q Consensus 334 tfa~~-~~~~p--l-~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~-- 407 (451)
++... ..... . ..+.+.-+.|++|.+++ | .+.|++++++++++.+...........++..+..++..|+.+.
T Consensus 241 v~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~-G-~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~ 318 (425)
T PRK08088 241 VQTGAGRTGTLFAMEQMGVAADLTTFAKSIAG-G-FPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQE 318 (425)
T ss_pred cccCCCcCcchhHHhhcCCCCCEEEEeccccC-C-CcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 97632 11111 1 23444446889999984 3 5789999999998887654433333456666666555555432
Q ss_pred ---HHHHHHHHHH-HHHHHHHHcCCCeEEEecCCC
Q 013019 408 ---LRVQQQNSTA-LRMAEILEAHPKVLLLFITLL 438 (451)
Q Consensus 408 ---~Rl~~~~~nA-~~Lae~L~~~p~V~~V~yPgL 438 (451)
.++.+..+.. ..+.+.+.++|.+..|..+|+
T Consensus 319 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~ 353 (425)
T PRK08088 319 NLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGA 353 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccce
Confidence 1222222222 223333345677666655443
No 301
>PRK12403 putative aminotransferase; Provisional
Probab=99.26 E-value=1.7e-09 Score=114.88 Aligned_cols=228 Identities=18% Similarity=0.183 Sum_probs=137.9
Q ss_pred CchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------CCCe-EEEcCCCCcc-hHHHHHHh-h---hc
Q 013019 208 GNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AGGH-IVTTTDCYRK-TRIFIETV-L---PK 272 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~-------~GD~-VIv~~~~Y~~-t~~~l~~~-l---~~ 272 (451)
.++...+|.++|+++.+ .+.+++++||++|+..++..... +++. |+.....|.+ +...+... . ..
T Consensus 96 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~ 175 (460)
T PRK12403 96 THPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHE 175 (460)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccc
Confidence 46778899999999986 36788899999999999876541 2334 4444555544 33222110 0 00
Q ss_pred CC---cEEEEeCCC-------C----------HHHHHHhhc---CCCeEEEEEeCCCCCcccccc----HHHHHHHHHhc
Q 013019 273 MG---ITATVIDPA-------D----------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (451)
Q Consensus 273 ~G---i~v~~vd~~-------D----------~d~Le~ai~---~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~ 325 (451)
.+ -.+..++.. + .+++++.+. ++++.+|++|......|.+.+ +++|.++|++|
T Consensus 176 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~ 255 (460)
T PRK12403 176 MGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY 255 (460)
T ss_pred cCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc
Confidence 00 012222211 1 245655552 134889999988777777766 99999999999
Q ss_pred CCEEEEecCCCCC------CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH--hhCC--CccHHH
Q 013019 326 GAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGG--ALNPNA 395 (451)
Q Consensus 326 g~~lVVD~tfa~~------~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--~~G~--~ls~~~ 395 (451)
|+++|+||++... +...-...-.||++ ++|.++|.- +..|.+++++++.+.+..... ..+. ..+|..
T Consensus 256 g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gK~lggG~-~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~ 332 (460)
T PRK12403 256 DVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS--IAKGLTSGY-VPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVA 332 (460)
T ss_pred CCEEEEeccccCCCcCchhhhhhhcCCCCCeEE--Ecccccccc-cceEEEEECHHHHHHHhcCCCccccCCCCCCCHHH
Confidence 9999999996321 11122222358887 899998641 134555678888777643111 1222 256777
Q ss_pred HHHHHHhhHHHHH--HHHHHH-HHHHHHHHHH----HcCCCeEEEecCCC
Q 013019 396 AYLIIRGMKTLHL--RVQQQN-STALRMAEIL----EAHPKVLLLFITLL 438 (451)
Q Consensus 396 a~l~lrgL~tl~~--Rl~~~~-~nA~~Lae~L----~~~p~V~~V~yPgL 438 (451)
+..++..|+.+.. .+++.. ++..++.+.| +++|.|..|+.-||
T Consensus 333 ~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 382 (460)
T PRK12403 333 AAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGL 382 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecce
Confidence 7776666666543 234443 4555555544 45777777765544
No 302
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.24 E-value=4.5e-10 Score=127.76 Aligned_cols=158 Identities=20% Similarity=0.274 Sum_probs=121.2
Q ss_pred HHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHH-ccCC--CeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHH
Q 013019 212 TVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL-VPAG--GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (451)
Q Consensus 212 ~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~al-l~~G--D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d 286 (451)
..++++.|++|.|. +++-++.+++++..++++++ +.+| |+|++++..|+.+...+...++..|++++.++..+.+
T Consensus 150 l~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~ 229 (993)
T PLN02414 150 LLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD 229 (993)
T ss_pred HHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc
Confidence 34568899999997 45777888888888777766 3444 7899999999999888888888899999988764322
Q ss_pred HHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCC--CCCccccccCCCcEEEECCcccC-----
Q 013019 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA--TPLNQKALSLGADLVLHSATKFI----- 359 (451)
Q Consensus 287 ~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa--~~~~~~pl~~GaDiVv~S~SK~l----- 359 (451)
...+ .+..+++..|+ .+|.+.|+++|+++||++|+++++ .+.. ......|-++|+||++.+.+||.
T Consensus 230 ----~~~~-~v~~vlvq~P~-~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~ 302 (993)
T PLN02414 230 ----YSSG-DVCGVLVQYPA-TDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGY 302 (993)
T ss_pred ----cccC-ceEEEEEecCC-CCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCC
Confidence 2223 25566676665 599999999999999999999999 4422 22223577899999999999998
Q ss_pred CccccceeEEEEeCHHHHHH
Q 013019 360 GGHNDVLAGSISGSGKLVTQ 379 (451)
Q Consensus 360 ~G~gdv~gG~Iv~~~eli~~ 379 (451)
+|+. .|+++.++++.+.
T Consensus 303 GGP~---aGflavr~~~~r~ 319 (993)
T PLN02414 303 GGPH---AAFLATSQEYKRL 319 (993)
T ss_pred CCCC---eeEEEECHHHHhh
Confidence 5554 7999999877553
No 303
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.24 E-value=1.8e-09 Score=114.30 Aligned_cols=228 Identities=14% Similarity=0.131 Sum_probs=139.8
Q ss_pred CCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHcc-CC-CeEEEcCCCCcch-HHHHHHhh------hcCC
Q 013019 207 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVP-AG-GHIVTTTDCYRKT-RIFIETVL------PKMG 274 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all~-~G-D~VIv~~~~Y~~t-~~~l~~~l------~~~G 274 (451)
+.++...+|.++|+++... +.+.+++||++|+..++..... .| .+||..+..|.+. ...+...- ..++
T Consensus 82 ~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~ 161 (445)
T PRK08593 82 MYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYG 161 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCC
Confidence 5678888999999998753 3566668999999998874321 23 4677777777663 22221100 0011
Q ss_pred ---cEEEEeCCCC-----------------HHHHHHhhc----CCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcC
Q 013019 275 ---ITATVIDPAD-----------------MEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKG 326 (451)
Q Consensus 275 ---i~v~~vd~~D-----------------~d~Le~ai~----~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g 326 (451)
..+..++..| ++++++.+. .+++.+|++|...+..|.+.+ +++|.++|++||
T Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g 241 (445)
T PRK08593 162 PLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHG 241 (445)
T ss_pred CCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 1122222111 134554442 235899999998887777755 899999999999
Q ss_pred CEEEEecCCCCC-Ccc-----ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHH
Q 013019 327 AIVCIDGTFATP-LNQ-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII 400 (451)
Q Consensus 327 ~~lVVD~tfa~~-~~~-----~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~l 400 (451)
+++|+||++... ... .-...-.|++ +++|.+++. ..+|++++++++++.+...........+|..+..++
T Consensus 242 ~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~--t~gK~l~~G--~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~ 317 (445)
T PRK08593 242 ILFAVDDIQQGLGRTGKWSSISHFNITPDLM--SFGKSLAGG--MPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAAL 317 (445)
T ss_pred CEEEEechhhCCCcCchHHHHHhcCCCCCEe--eecccccCC--cccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHH
Confidence 999999996321 111 1112224766 589999853 457889999998887753222233345677666555
Q ss_pred HhhHHHHH--HHHHHHHHHHHHHHHHH----cCCCeEEEecCCC
Q 013019 401 RGMKTLHL--RVQQQNSTALRMAEILE----AHPKVLLLFITLL 438 (451)
Q Consensus 401 rgL~tl~~--Rl~~~~~nA~~Lae~L~----~~p~V~~V~yPgL 438 (451)
..|+.+.. .+++..+....+.+.|+ ++|.|..|+.-||
T Consensus 318 a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl 361 (445)
T PRK08593 318 ATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGL 361 (445)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccce
Confidence 55555432 23444445555555554 4777777765554
No 304
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.23 E-value=2.3e-09 Score=112.58 Aligned_cols=227 Identities=14% Similarity=0.161 Sum_probs=140.0
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------CC-CeEEEcCCCCcchHHHHHHhhhc---
Q 013019 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLPK--- 272 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~-------~G-D~VIv~~~~Y~~t~~~l~~~l~~--- 272 (451)
.+.++...+|.++|+++.. .+.+.+++||++|+..++..... +| .+||.....|.+...........
T Consensus 81 ~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~ 160 (423)
T PRK05964 81 GFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGM 160 (423)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccc
Confidence 4567888889999999874 46788889999999998875432 23 47888888887633211111100
Q ss_pred ------CCcEEEEeCC--CC-----HHHHHHhhcC--CCeEEEEEeC-CCCCcccccc----HHHHHHHHHhcCCEEEEe
Q 013019 273 ------MGITATVIDP--AD-----MEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 273 ------~Gi~v~~vd~--~D-----~d~Le~ai~~--~~tklV~les-PsNPtG~v~D----L~~IaelA~~~g~~lVVD 332 (451)
....+.+++. .| ++++++.+.+ +++.+|++|. ..+..|...+ +++|.++|++||+++|+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~D 240 (423)
T PRK05964 161 HALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFD 240 (423)
T ss_pred cccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 0011223332 24 7788888842 2488999987 4666665543 899999999999999999
Q ss_pred cCCCCC-C-----ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH---hH-hhCC--CccHHHHHHHH
Q 013019 333 GTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL---HH-VLGG--ALNPNAAYLII 400 (451)
Q Consensus 333 ~tfa~~-~-----~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~---~~-~~G~--~ls~~~a~l~l 400 (451)
|++... . .........|++ +++|.++|.. ...|++++++++.+.+... .. ..+. ..++..+..++
T Consensus 241 Ev~tg~gr~G~~~a~~~~~v~pDi~--~~~K~l~gG~-~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~ 317 (423)
T PRK05964 241 EIATGFGRTGTLFACEQAGVSPDIM--CLSKGLTGGY-LPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAAN 317 (423)
T ss_pred chhhCCCcCcchhHHHhcCCCCCee--eeehhhhcCc-ccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHH
Confidence 996321 1 111122235765 4679997653 3467788999988877531 11 1222 24666666555
Q ss_pred HhhHHHH--HHHHHHHHHHHHHHHHHHc---CCCeEEEec
Q 013019 401 RGMKTLH--LRVQQQNSTALRMAEILEA---HPKVLLLFI 435 (451)
Q Consensus 401 rgL~tl~--~Rl~~~~~nA~~Lae~L~~---~p~V~~V~y 435 (451)
..++.+. ..+++..+..+.+.+.|++ +|.|..|..
T Consensus 318 a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg 357 (423)
T PRK05964 318 ASLDLFEDEPVLERVAALSAGLAEGLEPFRDLPGVADVRV 357 (423)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHhhccCCCeEEeec
Confidence 5555443 2345555666666666654 455544433
No 305
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.22 E-value=2.3e-09 Score=112.57 Aligned_cols=227 Identities=15% Similarity=0.155 Sum_probs=139.9
Q ss_pred ccCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHcc-C-CCeEEEcCCCCcchHHHHHHhhh-----c-
Q 013019 204 YGRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP-A-GGHIVTTTDCYRKTRIFIETVLP-----K- 272 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~g---ae~~vv~sSG~aAi~~al~all~-~-GD~VIv~~~~Y~~t~~~l~~~l~-----~- 272 (451)
+..+.++...+|.++|+++.. .+...+++||++|+..++..... . ..+|+.....|.+.....-.+-. +
T Consensus 77 ~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~ 156 (421)
T PRK06777 77 YQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKV 156 (421)
T ss_pred ccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCccccc
Confidence 334567778889899998864 35788889999999998874321 2 34688877777664322111100 0
Q ss_pred -CC---cEEEEeCCC----------CHHHHHHhhc----CCCeEEEEEeCCCCCccc-ccc---HHHHHHHHHhcCCEEE
Q 013019 273 -MG---ITATVIDPA----------DMEGLEAALN----NNNVSLFFTESPTNPFLR-CVD---VKLVSDLCHKKGAIVC 330 (451)
Q Consensus 273 -~G---i~v~~vd~~----------D~d~Le~ai~----~~~tklV~lesPsNPtG~-v~D---L~~IaelA~~~g~~lV 330 (451)
++ -.+..++.. +++.+++.++ ++++.+|++|...+..|. +.+ +++|.++|++||+++|
T Consensus 157 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (421)
T PRK06777 157 GFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLI 236 (421)
T ss_pred CCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 00 011112211 2566777764 235899999988877774 344 8999999999999999
Q ss_pred EecCCCCC-Cccc-----cccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH
Q 013019 331 IDGTFATP-LNQK-----ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (451)
Q Consensus 331 VD~tfa~~-~~~~-----pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~ 404 (451)
+||++... .... ....-.|++ +++|.+++ | ...|++++++++++.+...........++..+..++..|+
T Consensus 237 ~DEv~tg~gr~g~~~~~~~~~~~pDiv--~~sK~l~~-G-~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 312 (421)
T PRK06777 237 ADEVQTGFARTGKLFAMEYYDVKPDLI--TMAKSLGG-G-MPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLD 312 (421)
T ss_pred EechhhCCccCCchhhhhhcCCCCCEE--eeehhhcC-C-CceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99996532 1111 112225765 58999984 4 5688999999888776543322222346776666666665
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHc----CCCeEEEe
Q 013019 405 TLH--LRVQQQNSTALRMAEILEA----HPKVLLLF 434 (451)
Q Consensus 405 tl~--~Rl~~~~~nA~~Lae~L~~----~p~V~~V~ 434 (451)
.+. ..+++..+..+.+.+.|++ +|.+..|.
T Consensus 313 ~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr 348 (421)
T PRK06777 313 VIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIR 348 (421)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEec
Confidence 443 2244455555566665543 56555553
No 306
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.22 E-value=8.6e-10 Score=112.59 Aligned_cols=230 Identities=17% Similarity=0.173 Sum_probs=141.6
Q ss_pred cCCCchhHHHHHHHHHhhh--CCCcEEEeCCHHHHHHHHHHHHc-------c-CCCeEEEcCCCCcch-HHHHH------
Q 013019 205 GRYGNPTTVVVEEKMSALE--GAESTVIMASGMSASTVMLLALV-------P-AGGHIVTTTDCYRKT-RIFIE------ 267 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~--gae~~vv~sSG~aAi~~al~all-------~-~GD~VIv~~~~Y~~t-~~~l~------ 267 (451)
..+.++...+|.++|.++. +.+...+++||++|+..++.... . ...+|+.....|.+. ...+.
T Consensus 54 ~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~ 133 (339)
T PF00202_consen 54 SGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPP 133 (339)
T ss_dssp TTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTH
T ss_pred cceeccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCcc
Confidence 5567788899999999999 44778888999999999987554 2 236788888888762 21221
Q ss_pred --HhhhcCCcEEEEeCCCCHHH----------HHH---hhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCE
Q 013019 268 --TVLPKMGITATVIDPADMEG----------LEA---ALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (451)
Q Consensus 268 --~~l~~~Gi~v~~vd~~D~d~----------Le~---ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~ 328 (451)
.........+..++..++.. +++ ....+++.+|++|....-.|.... +++|.++|++||++
T Consensus 134 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gil 213 (339)
T PF00202_consen 134 YRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGIL 213 (339)
T ss_dssp HHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-E
T ss_pred ccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccc
Confidence 11111212345556555544 222 222335899999976655554432 79999999999999
Q ss_pred EEEecCCCCC------CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHh
Q 013019 329 VCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (451)
Q Consensus 329 lVVD~tfa~~------~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrg 402 (451)
+|+||++... +..+....-.|+++. +|.+++. ...|.+++++++.+.+...........+|..+..++..
T Consensus 214 lI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~--gK~l~gG--~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~ 289 (339)
T PF00202_consen 214 LIADEVQTGFGRTGKFFASEHYGVDPDIVTF--GKGLGGG--LPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALAT 289 (339)
T ss_dssp EEEEETTTTTTTTSSSSGHHHHTSSSSEEEE--EGGGGTT--SSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHH
T ss_pred eecccccccccccCCccceecccccCccccc--ccchhhh--hhcccccccchhhccccccccccccccchHhhhhhhhH
Confidence 9999996431 222333445699985 5999875 56788888888777653322111122356666665555
Q ss_pred hHHHHHH--HHHHHHHHHHHHHHH---Hc-CCCeEEEecCCC
Q 013019 403 MKTLHLR--VQQQNSTALRMAEIL---EA-HPKVLLLFITLL 438 (451)
Q Consensus 403 L~tl~~R--l~~~~~nA~~Lae~L---~~-~p~V~~V~yPgL 438 (451)
|+.+... .++..+...++.+.| .+ ++.|..|+--||
T Consensus 290 l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl 331 (339)
T PF00202_consen 290 LEILEEEDLLERVRELGERLREGLRELAARYPLIGEVRGIGL 331 (339)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEETT
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeCe
Confidence 5554432 333333344443333 33 488888765554
No 307
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.21 E-value=2.5e-09 Score=113.05 Aligned_cols=226 Identities=15% Similarity=0.135 Sum_probs=136.9
Q ss_pred CchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcc-hHHHHHHh-h----h-cCC--
Q 013019 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRK-TRIFIETV-L----P-KMG-- 274 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~-t~~~l~~~-l----~-~~G-- 274 (451)
.++...+|.++|.++.+. +.+.+++||++|+..++..... ...+|+.-...|.+ +...+... . . .++
T Consensus 82 ~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~ 161 (443)
T PRK08360 82 FPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGEL 161 (443)
T ss_pred CcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCC
Confidence 467778888999988754 4677778999999998875421 23467776666655 32222110 0 0 011
Q ss_pred cEEEEeCC-----------------CCHHHHHHhhc----CCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEE
Q 013019 275 ITATVIDP-----------------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIV 329 (451)
Q Consensus 275 i~v~~vd~-----------------~D~d~Le~ai~----~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~l 329 (451)
..+.+++. .+++.+++.++ .+++++|++|...||+|.+.+ +++|.++|++||+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~ll 241 (443)
T PRK08360 162 SDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILL 241 (443)
T ss_pred CCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 11222211 12344556663 235999999976799997764 889999999999999
Q ss_pred EEecCCCCC-Cccc-----cccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh
Q 013019 330 CIDGTFATP-LNQK-----ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM 403 (451)
Q Consensus 330 VVD~tfa~~-~~~~-----pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL 403 (451)
|+||++... .... ....-.|++ +++|.+++ | ..+|++++++++++.+...........++..+..++..|
T Consensus 242 I~DEv~~g~gr~G~~~a~~~~~~~pDii--tlsK~l~~-G-~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l 317 (443)
T PRK08360 242 VVDEVQSGLGRTGKWFAIEHFGVEPDII--TLGKPLGG-G-LPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVI 317 (443)
T ss_pred EEeccccCCCcCccchhhhhcCCCCCEE--EecccccC-C-ceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHH
Confidence 999997532 1111 112224665 57999994 3 568899999998888764332223334566665555555
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHH----cCCCeEEEecCC
Q 013019 404 KTLHL--RVQQQNSTALRMAEILE----AHPKVLLLFITL 437 (451)
Q Consensus 404 ~tl~~--Rl~~~~~nA~~Lae~L~----~~p~V~~V~yPg 437 (451)
+.+.. .+++..+....+.+.|+ ++|.|..|+.-|
T Consensus 318 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~G 357 (443)
T PRK08360 318 EEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIG 357 (443)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccc
Confidence 55432 23344444444444443 466666664433
No 308
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.21 E-value=1.4e-09 Score=112.44 Aligned_cols=221 Identities=20% Similarity=0.268 Sum_probs=145.6
Q ss_pred CccccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcchHHHHHHhh-------
Q 013019 201 SFEYGRYGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL------- 270 (451)
Q Consensus 201 ~~~Y~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t~~~l~~~l------- 270 (451)
+..|+. ++..--++.+.|.++.+. |..-+++||++|.+.+++... -..|+|+..+.+|.+....+---.
T Consensus 85 G~~fg~-Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~ 163 (432)
T COG0001 85 GLSFGA-PTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATL 163 (432)
T ss_pred cCCCCC-CCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccC
Confidence 455654 333334567888888876 888999999999999887432 235889999999988655432110
Q ss_pred ---hcCCc------EEEEeCCCCHHHHHHhhcCC--CeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCC
Q 013019 271 ---PKMGI------TATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 271 ---~~~Gi------~v~~vd~~D~d~Le~ai~~~--~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tf 335 (451)
...|+ .+..++.+|++.+++++++. ++..|++|-...-.|.+.+ +++|.++|+++|++||.||+.
T Consensus 164 g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEVi 243 (432)
T COG0001 164 GSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVI 243 (432)
T ss_pred CCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecch
Confidence 11122 23445678999999999764 6899999876555666554 789999999999999999984
Q ss_pred CCC-----CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHh-hCCCc--cHHHHHHHHHhhHHHH
Q 013019 336 ATP-----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV-LGGAL--NPNAAYLIIRGMKTLH 407 (451)
Q Consensus 336 a~~-----~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~-~G~~l--s~~~a~l~lrgL~tl~ 407 (451)
-.. -.|.-...-.|+.+ +.|.++|. +-.|++.++.++++.+...... .++++ +|.........|+.+.
T Consensus 244 TGFR~~~gGaq~~~gi~PDltt--lGKiIGGG--lP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~ 319 (432)
T COG0001 244 TGFRVALGGAQGYYGVEPDLTT--LGKIIGGG--LPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELM 319 (432)
T ss_pred hhcccCCcccccccCcCcchhh--hhhhhcCC--cceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHH
Confidence 321 22333333457665 89999976 4689999999999877654322 22222 4544444333444443
Q ss_pred H---HHHHHHHHHHHHHHHHHc
Q 013019 408 L---RVQQQNSTALRMAEILEA 426 (451)
Q Consensus 408 ~---Rl~~~~~nA~~Lae~L~~ 426 (451)
. -.++..+.+.+|++.|++
T Consensus 320 ~~~~~y~~l~~~~~~L~~gl~~ 341 (432)
T COG0001 320 TEEGVYERLDALGERLAEGLRA 341 (432)
T ss_pred hcccHHHHHHHHHHHHHHHHHH
Confidence 3 245556667777776654
No 309
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.21 E-value=2.2e-09 Score=109.85 Aligned_cols=160 Identities=24% Similarity=0.369 Sum_probs=126.6
Q ss_pred HHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc---cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHH
Q 013019 214 VVEEKMSALEGA--ESTVIMASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (451)
Q Consensus 214 ~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all---~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~L 288 (451)
+++..+++|.|- .++-++-.|+++-.+++++.. ++.++++++..+|+.+...++..++.+|+++..++..|.+++
T Consensus 124 efQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l 203 (450)
T COG0403 124 EFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDL 203 (450)
T ss_pred HHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhh
Confidence 357888999985 456667777766566655543 235789999999999999999889999999999998899999
Q ss_pred HHhhcCCCeEEEEEeCCCCCcc-ccccHHHHHHHHHhcCCEEEEecC-CCCCCccccccCCCcEEEECCccc-----CCc
Q 013019 289 EAALNNNNVSLFFTESPTNPFL-RCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATKF-----IGG 361 (451)
Q Consensus 289 e~ai~~~~tklV~lesPsNPtG-~v~DL~~IaelA~~~g~~lVVD~t-fa~~~~~~pl~~GaDiVv~S~SK~-----l~G 361 (451)
+++ .+..+..|+++.|+ -+| ...|+++|.+.+|++|+++++=.- .+-.+...|.++|+||++.+..-+ |||
T Consensus 204 ~~~-~~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGG 281 (450)
T COG0403 204 ESA-DDGDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGG 281 (450)
T ss_pred hhc-cccCeEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCCC
Confidence 998 54458999999998 567 667899999999999988776432 334567788999999999997763 666
Q ss_pred cccceeEEEEeCHHHHH
Q 013019 362 HNDVLAGSISGSGKLVT 378 (451)
Q Consensus 362 ~gdv~gG~Iv~~~eli~ 378 (451)
+. +|+.+.++++..
T Consensus 282 Ph---ag~fA~~~~~~R 295 (450)
T COG0403 282 PH---AGYFAVKDEFKR 295 (450)
T ss_pred cc---eeeeeEhHhHhh
Confidence 65 888888877643
No 310
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.21 E-value=3.5e-09 Score=111.05 Aligned_cols=231 Identities=14% Similarity=0.098 Sum_probs=137.4
Q ss_pred ccCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHcc-C-CCeEEEcCCCCcch-HHHHHHhh----hcC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVP-A-GGHIVTTTDCYRKT-RIFIETVL----PKM 273 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all~-~-GD~VIv~~~~Y~~t-~~~l~~~l----~~~ 273 (451)
+..+.++...+|.++|.++... +...+++||++|+..++..... . ..+|+.....|.+. ...+...- ...
T Consensus 70 ~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~ 149 (420)
T TIGR00700 70 FMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKS 149 (420)
T ss_pred ccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCccccc
Confidence 3345677788899999988742 5678889999999998874321 2 34677777777663 22221100 011
Q ss_pred Cc-----EEEEeCCC----------------CHHHHHHhhc----CCCeEEEEEeCCCCCcccccc----HHHHHHHHHh
Q 013019 274 GI-----TATVIDPA----------------DMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (451)
Q Consensus 274 Gi-----~v~~vd~~----------------D~d~Le~ai~----~~~tklV~lesPsNPtG~v~D----L~~IaelA~~ 324 (451)
+. .+..++.. +++.+++.+. ++++.+|++|....-+|...+ +++|.++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~ 229 (420)
T TIGR00700 150 GFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCRE 229 (420)
T ss_pred CCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHH
Confidence 11 11112110 1456666652 235899999987776776654 8999999999
Q ss_pred cCCEEEEecCCCCC-Ccc-----ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHH
Q 013019 325 KGAIVCIDGTFATP-LNQ-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL 398 (451)
Q Consensus 325 ~g~~lVVD~tfa~~-~~~-----~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l 398 (451)
||+++|+||++... ... .....-.|+++ ++|.+++ | ...|++++++++++.+...........++..+..
T Consensus 230 ~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~--lsK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aa 305 (420)
T TIGR00700 230 HGIVFIADEVQTGFARTGAMFACEHEGPEPDLIT--TAKSLAD-G-LPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAA 305 (420)
T ss_pred cCCEEEEEecccCCcccchhHHHhhcCCCCCEEE--eeccccC-C-cceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHH
Confidence 99999999997532 111 11222357654 8999984 4 5788999999988877533222222345666665
Q ss_pred HHHhhHHHH-----HHHHHHHHH-HHHHHHHHHcCCCeEEEecCCC
Q 013019 399 IIRGMKTLH-----LRVQQQNST-ALRMAEILEAHPKVLLLFITLL 438 (451)
Q Consensus 399 ~lrgL~tl~-----~Rl~~~~~n-A~~Lae~L~~~p~V~~V~yPgL 438 (451)
++..|+.+. .++++..+. ...|.+....+|.+..|...|+
T Consensus 306 a~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~ 351 (420)
T TIGR00700 306 ALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGA 351 (420)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEeeccce
Confidence 544444332 223222222 2233333345677767655543
No 311
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.20 E-value=1.4e-09 Score=115.56 Aligned_cols=228 Identities=14% Similarity=0.142 Sum_probs=141.6
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc----CC-CeEEEcCCCCcch-HHHHHHh----h----
Q 013019 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP----AG-GHIVTTTDCYRKT-RIFIETV----L---- 270 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~----~G-D~VIv~~~~Y~~t-~~~l~~~----l---- 270 (451)
+.+|...+|.++|+++... +.+.+++||++|+..++..... .| .+||.....|.+. ...+... .
T Consensus 121 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~ 200 (459)
T PRK11522 121 LLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPF 200 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCC
Confidence 3578888899999998643 5677788999999998875431 12 3588877777663 2222110 0
Q ss_pred hcCCcEEEEeCCCCHHHHHHhhcC-----CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCC----
Q 013019 271 PKMGITATVIDPADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT---- 337 (451)
Q Consensus 271 ~~~Gi~v~~vd~~D~d~Le~ai~~-----~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~---- 337 (451)
....-.+..++..|.++++++++. .++.+|++|......|.+.+ +++|.++|++||+++|+||++..
T Consensus 201 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRt 280 (459)
T PRK11522 201 MPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRT 280 (459)
T ss_pred CCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCcc
Confidence 000112344556688888887752 34789999988877787776 99999999999999999999632
Q ss_pred C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCc--cHHHHHHHHHhhHHHHH--HHH
Q 013019 338 P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHL--RVQ 411 (451)
Q Consensus 338 ~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~l--s~~~a~l~lrgL~tl~~--Rl~ 411 (451)
+ +..+-...-.||+ +++|.+++.- +..|.+++++++.+.+.......+.+. +|..+..++..|+.+.. .++
T Consensus 281 G~~~a~e~~gv~PDiv--t~gK~lggG~-~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~ 357 (459)
T PRK11522 281 GKMFACEHENVQPDIL--CLAKALGGGV-MPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPA 357 (459)
T ss_pred chhhhhhccCCCCCEE--EechhhhCCC-ccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHH
Confidence 1 1111112235777 5799998631 125666777777775532111223333 67766666655655532 234
Q ss_pred HHHHHHHHHHHHHH----cCC-CeEEEecCC
Q 013019 412 QQNSTALRMAEILE----AHP-KVLLLFITL 437 (451)
Q Consensus 412 ~~~~nA~~Lae~L~----~~p-~V~~V~yPg 437 (451)
+..+....+.+.|+ ++| .|..|+..|
T Consensus 358 ~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~G 388 (459)
T PRK11522 358 QAEQKGDYLLDGFRQLAREYPDLVQEARGKG 388 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceeeEEece
Confidence 44455555555554 356 456665444
No 312
>PRK07046 aminotransferase; Validated
Probab=99.20 E-value=3.4e-09 Score=112.36 Aligned_cols=225 Identities=19% Similarity=0.204 Sum_probs=145.4
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHH-HHHHhh-----h---cCCc
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRI-FIETVL-----P---KMGI 275 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~-~l~~~l-----~---~~Gi 275 (451)
..++...+|.++|.++.+.+...+++||++|+..++..... ..++|+.....|.+... .+.... . ..|+
T Consensus 112 ~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~ 191 (453)
T PRK07046 112 LPSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQ 191 (453)
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCC
Confidence 45777788999999988878888999999999998875421 24678888888877432 111100 0 0121
Q ss_pred ------EEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCC----CCCcc
Q 013019 276 ------TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA----TPLNQ 341 (451)
Q Consensus 276 ------~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa----~~~~~ 341 (451)
.+..++..|++++++.+...++.+|++|......|.+.+ +++|.++|+++|+++|+||+.. .+-.+
T Consensus 192 ~~~~~~~~~~~~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~ 271 (453)
T PRK07046 192 VHDLTATTRVVEFNDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYT 271 (453)
T ss_pred CccccCceEeeCCCCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchh
Confidence 233455678999999996556899999977655565543 8999999999999999999863 22222
Q ss_pred ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh------H-hhCC--CccHHHHHHHHHhhHHHHH--HH
Q 013019 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH------H-VLGG--ALNPNAAYLIIRGMKTLHL--RV 410 (451)
Q Consensus 342 ~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~------~-~~G~--~ls~~~a~l~lrgL~tl~~--Rl 410 (451)
.-...-.||++ +.|.++|. ...|++++++++++.+.... . ..+. ..+|..+...+..|+.+.. ..
T Consensus 272 ~~~gv~PDi~t--~gK~lggG--~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~ 347 (453)
T PRK07046 272 RAHGLEPDFLV--VGKPIAGG--VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAY 347 (453)
T ss_pred HHhCCCcccee--ehhhhcCC--CcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHH
Confidence 22223358876 79999974 45788899999888775321 0 1122 2366666655555554422 13
Q ss_pred HHHHHHHHHHHHHHH----cCCCeEEEec
Q 013019 411 QQQNSTALRMAEILE----AHPKVLLLFI 435 (451)
Q Consensus 411 ~~~~~nA~~Lae~L~----~~p~V~~V~y 435 (451)
++..+..+.|.+.|+ +++.+..|..
T Consensus 348 ~~~~~~g~~l~~~L~~l~~~~~~~~~v~g 376 (453)
T PRK07046 348 AHMLALAARLAAGLRAVIARHGLPWHVTR 376 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 444445555555554 4554444443
No 313
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.20 E-value=1.6e-09 Score=113.79 Aligned_cols=198 Identities=15% Similarity=0.139 Sum_probs=124.8
Q ss_pred ccCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHcc-CC-CeEEEcCCCCcch-HHHHHHhh----hcC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVP-AG-GHIVTTTDCYRKT-RIFIETVL----PKM 273 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all~-~G-D~VIv~~~~Y~~t-~~~l~~~l----~~~ 273 (451)
+..+.++...+|.++|+++... +..++++||++|+..++..... .| .+|+.....|.+. ...+...- .+.
T Consensus 77 ~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 156 (421)
T PRK09792 77 YQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKI 156 (421)
T ss_pred cCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCccccc
Confidence 3345678888899999988642 5678889999999998875432 23 4688888777663 22221100 011
Q ss_pred Cc-----EEEEeCC----------CCHHHHHHhhc----CCCeEEEEEeCCCCCccccc-c---HHHHHHHHHhcCCEEE
Q 013019 274 GI-----TATVIDP----------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVC 330 (451)
Q Consensus 274 Gi-----~v~~vd~----------~D~d~Le~ai~----~~~tklV~lesPsNPtG~v~-D---L~~IaelA~~~g~~lV 330 (451)
+. .+..++. .+++.+++.++ .+++++|++|...+++|... + +++|.++|++||+++|
T Consensus 157 ~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (421)
T PRK09792 157 GFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMI 236 (421)
T ss_pred CCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 11 1222222 13477888775 23589999998889998654 5 8999999999999999
Q ss_pred EecCCCCC-Ccc-----ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH
Q 013019 331 IDGTFATP-LNQ-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (451)
Q Consensus 331 VD~tfa~~-~~~-----~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~ 404 (451)
+||++... ... ..+....|+ .+++|.+++. ...|++++++++++.+...........+|..+..++..++
T Consensus 237 ~DEv~tg~gr~G~~~a~~~~~~~pDi--~t~gK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~ 312 (421)
T PRK09792 237 ADEVQSGFARTGKLFAMDHYADKPDL--MTMAKSLAGG--MPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLN 312 (421)
T ss_pred EeccccCCCCCCchhHHHhcCCCCcE--EEeehhhcCC--CceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHH
Confidence 99986432 111 111123564 5689999853 4688899999888776532221122345655554333333
Q ss_pred H
Q 013019 405 T 405 (451)
Q Consensus 405 t 405 (451)
.
T Consensus 313 ~ 313 (421)
T PRK09792 313 I 313 (421)
T ss_pred H
Confidence 3
No 314
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.18 E-value=8.5e-10 Score=113.55 Aligned_cols=204 Identities=11% Similarity=0.042 Sum_probs=136.7
Q ss_pred hhHHHHHHHHHhhhCC-C--cEEEe-CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 210 PTTVVVEEKMSALEGA-E--STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~ga-e--~~vv~-sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
...+..++.|+++++. + +++++ +||+.|+.+++..++.+||++++......+.+ +...++++|.. ..+..
T Consensus 48 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r--~~~~a~~~g~~-~~~~~~~~ 124 (360)
T PRK05355 48 AVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKK--AIKEAKKYGEV-NVAASSED 124 (360)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCCc-eEEecccc
Confidence 4567789999999995 2 34444 67889999999999999998777654444432 23566777765 33321
Q ss_pred ---CCHHHHHH-hhcCCCeEEEEEeCCCCCccccc-cHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEECCc
Q 013019 283 ---ADMEGLEA-ALNNNNVSLFFTESPTNPFLRCV-DVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSAT 356 (451)
Q Consensus 283 ---~D~d~Le~-ai~~~~tklV~lesPsNPtG~v~-DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S~S 356 (451)
.+..++++ ++++ ++++|.+..-.+.||... |+++| +|++++||.+.+.+. ..+.-++ |+++.|.+
T Consensus 125 ~g~~~~~~~~~~~l~~-~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~~~--d~~~~ssq 195 (360)
T PRK05355 125 DGFTYIPPLDEWQLSD-DAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVSKF--GLIYAGAQ 195 (360)
T ss_pred cCCCCCCChhhccCCC-CCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHHHc--cEEEEecc
Confidence 12234444 6766 489999877778899997 77766 899999999965442 1222233 69999999
Q ss_pred ccCCccccceeEEEEeCHHHHHHHHHH-h----------H-hhCCCccHHHHHHHHHhhHH------HHHHHHHHHHHHH
Q 013019 357 KFIGGHNDVLAGSISGSGKLVTQIRNL-H----------H-VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~~eli~~lr~~-~----------~-~~G~~ls~~~a~l~lrgL~t------l~~Rl~~~~~nA~ 418 (451)
|.++.+| .|+++.++++++++... . . ....+++-...+.+..+|+. ++.+.+++.+.++
T Consensus 196 K~lgP~G---lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~ 272 (360)
T PRK05355 196 KNIGPAG---LTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAA 272 (360)
T ss_pred ccccCCc---eEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 9998766 89999999888775431 1 0 01122333333333333332 4456677788889
Q ss_pred HHHHHHHcCC
Q 013019 419 RMAEILEAHP 428 (451)
Q Consensus 419 ~Lae~L~~~p 428 (451)
.+.++|++.+
T Consensus 273 ~l~~~l~~~~ 282 (360)
T PRK05355 273 LLYDAIDSSD 282 (360)
T ss_pred HHHHHHHhCC
Confidence 9999999877
No 315
>PRK06105 aminotransferase; Provisional
Probab=99.16 E-value=7.7e-09 Score=109.88 Aligned_cols=232 Identities=13% Similarity=0.120 Sum_probs=142.5
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-------CC-CeEEEcCCCCcchH-HHHHH----
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTR-IFIET---- 268 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~-------~G-D~VIv~~~~Y~~t~-~~l~~---- 268 (451)
++++.++...+|.++|+++... +.+.+++||++|+.+++..... +| .+||.....|.+.. ..+..
T Consensus 86 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~ 165 (460)
T PRK06105 86 FSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLP 165 (460)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCc
Confidence 3456678888899999998753 5677789999999998876421 22 46777777776632 21100
Q ss_pred -hhhcCCc---EEEEeCCC------------------CHHHHHHhhc---CCCeEEEEEeCCCCCcccccc----HHHHH
Q 013019 269 -VLPKMGI---TATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVS 319 (451)
Q Consensus 269 -~l~~~Gi---~v~~vd~~------------------D~d~Le~ai~---~~~tklV~lesPsNPtG~v~D----L~~Ia 319 (451)
..+.++. .+..++.. ..+++++.+. .+++.+|++|......|.+.+ +++|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr 245 (460)
T PRK06105 166 NNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQ 245 (460)
T ss_pred ccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence 0001111 12222211 1356677663 235899999987766676665 89999
Q ss_pred HHHHhcCCEEEEecCCC-CCC-----ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh-------Hh
Q 013019 320 DLCHKKGAIVCIDGTFA-TPL-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HV 386 (451)
Q Consensus 320 elA~~~g~~lVVD~tfa-~~~-----~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-------~~ 386 (451)
++|++||+++|+||++. .+. ..+-...-.||++ ++|.++|.. +.+|++++++++.+.+.... ..
T Consensus 246 ~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~--~gK~lggG~-~P~~av~~~~~i~~~~~~~~~~~~~~~h~ 322 (460)
T PRK06105 246 AVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILV--MSKQLSSSY-QPLSAVLMNEKVYDPIADESGKIGTFGHG 322 (460)
T ss_pred HHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeee--eecccccCc-ccceEEEEcHHHHHHHhcccccCcccccC
Confidence 99999999999999962 211 1121222357775 799998742 24788888988887765321 11
Q ss_pred hCCCccHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHH---HcCCCeEEEecCCC
Q 013019 387 LGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEIL---EAHPKVLLLFITLL 438 (451)
Q Consensus 387 ~G~~ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L---~~~p~V~~V~yPgL 438 (451)
.....+|..+..++..|+.+.. .+++..+....|.+.| +++|.|..|+.-|+
T Consensus 323 ~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl 379 (460)
T PRK06105 323 FTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRALADHPLVGEVRGVGL 379 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecce
Confidence 1223567777766666666543 2444444555554444 45676777765444
No 316
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.16 E-value=4.5e-09 Score=110.58 Aligned_cols=231 Identities=12% Similarity=0.079 Sum_probs=137.6
Q ss_pred CCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcchH-HHHHH------hhhcC
Q 013019 206 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIET------VLPKM 273 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t~-~~l~~------~l~~~ 273 (451)
.+.++...+|.++|.++.+. +.+.+++||++|+..++.... ....+|+.....|.+.. ..+.. .-..+
T Consensus 79 ~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 158 (425)
T PRK07495 79 VVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGF 158 (425)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCC
Confidence 46678888899999998753 467778999999999887442 22356888777776632 21110 00001
Q ss_pred C---cEEEEeCCCC----------HHHHHHhhc----CCCeEEEEEeCCCCCcccc-cc---HHHHHHHHHhcCCEEEEe
Q 013019 274 G---ITATVIDPAD----------MEGLEAALN----NNNVSLFFTESPTNPFLRC-VD---VKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 274 G---i~v~~vd~~D----------~d~Le~ai~----~~~tklV~lesPsNPtG~v-~D---L~~IaelA~~~g~~lVVD 332 (451)
+ ..+.+++..+ ++++++.++ .+++.+|++|....-+|.. .+ +++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~D 238 (425)
T PRK07495 159 GAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIAD 238 (425)
T ss_pred CCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1 1223333221 455676653 2358999998766556633 22 889999999999999999
Q ss_pred cCCCCC-Ccccc---ccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHH
Q 013019 333 GTFATP-LNQKA---LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL 408 (451)
Q Consensus 333 ~tfa~~-~~~~p---l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~ 408 (451)
|++... ..... ...|...-+.+++|.+++. ..+|++++++++++.+...........+|..+..++..++.+..
T Consensus 239 Ev~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~ 316 (425)
T PRK07495 239 EVQTGFARTGKLFAMEHHEVAADLTTMAKGLAGG--FPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE 316 (425)
T ss_pred chhhcCCcCCCceeecccCCCCCEEeehhhhcCC--ccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh
Confidence 996421 11111 1123333346689999853 46889999998887765322222223466666655555554432
Q ss_pred --HHHHHHHHHHHHHHHH----HcCCCeEEEecCCC
Q 013019 409 --RVQQQNSTALRMAEIL----EAHPKVLLLFITLL 438 (451)
Q Consensus 409 --Rl~~~~~nA~~Lae~L----~~~p~V~~V~yPgL 438 (451)
..++..+...++.+.| +++|.+..|+.+||
T Consensus 317 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 352 (425)
T PRK07495 317 EDLCERANQLGNRLKQRLASLRETVPEIADIRGPGF 352 (425)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCce
Confidence 1233333333443333 34677777776664
No 317
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.15 E-value=2.8e-09 Score=109.02 Aligned_cols=154 Identities=21% Similarity=0.292 Sum_probs=113.2
Q ss_pred CcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----CCHHHHHHhhcCC-----
Q 013019 226 ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNNN----- 295 (451)
Q Consensus 226 e~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----~D~d~Le~ai~~~----- 295 (451)
+.-++.++|. .++..+++.+++.||+|++....|.+... .++.+|+.+..|+. .++|.|++.+...
T Consensus 124 ~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~----s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~ 199 (472)
T KOG0634|consen 124 NWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ----SMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSY 199 (472)
T ss_pred CceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHH----hccccCceEEeccccCCCCCHHHHHHHHhcCCcccc
Confidence 3456666666 89999999999999999999999988663 34567877776654 3688888877532
Q ss_pred ---CeEEEEE-eCCCCCccccccH---HHHHHHHHhcCCEEEEecCCCCC----Cc------c--------------ccc
Q 013019 296 ---NVSLFFT-ESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATP----LN------Q--------------KAL 344 (451)
Q Consensus 296 ---~tklV~l-esPsNPtG~v~DL---~~IaelA~~~g~~lVVD~tfa~~----~~------~--------------~pl 344 (451)
+++++|. -+-+||||....+ ++|.+||++|++++|.|+.|.-. +. . ..+
T Consensus 200 k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sfl 279 (472)
T KOG0634|consen 200 KKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFL 279 (472)
T ss_pred cCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcc
Confidence 2455554 4446999998875 68999999999999999985310 00 0 011
Q ss_pred c---CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH
Q 013019 345 S---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH 385 (451)
Q Consensus 345 ~---~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~ 385 (451)
. .|..|-..||||.++.. ++.||+.+++.+++++.....
T Consensus 280 slDtdGrVIr~dSFSKiiaPG--lRlG~it~~~~~l~ril~~ae 321 (472)
T KOG0634|consen 280 SLDTDGRVIRNDSFSKIIAPG--LRLGWITGNSLFLKRILDLAE 321 (472)
T ss_pred cccccccEEeccchhhhhcCc--ceeEEeecCHHHHHHHhhhcc
Confidence 1 14457788999999854 589999999988888765443
No 318
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.14 E-value=6.3e-09 Score=110.09 Aligned_cols=228 Identities=12% Similarity=0.149 Sum_probs=139.1
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------C-CCeEEEcCCCCcch-HHHHH--------
Q 013019 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKT-RIFIE-------- 267 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~-------~-GD~VIv~~~~Y~~t-~~~l~-------- 267 (451)
+.++...+|.++|+++.. .+.+.+++||++|+..++..... + ..+||.....|.+. ...+.
T Consensus 89 ~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~ 168 (445)
T PRK09221 89 MGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNR 168 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhh
Confidence 467888889999999874 36788889999999998875431 1 24688888887663 21110
Q ss_pred HhhhcCCcEEEEeCCC------------------CHHHHHHhhcC---CCeEEEEEeCCCCCcccccc----HHHHHHHH
Q 013019 268 TVLPKMGITATVIDPA------------------DMEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (451)
Q Consensus 268 ~~l~~~Gi~v~~vd~~------------------D~d~Le~ai~~---~~tklV~lesPsNPtG~v~D----L~~IaelA 322 (451)
..+......+..++.. ..+++++.++. +++.+|++|......|.+.+ +++|.++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc 248 (445)
T PRK09221 169 KMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREIC 248 (445)
T ss_pred hccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHH
Confidence 0001010112222211 13566776641 35889999988877888777 99999999
Q ss_pred HhcCCEEEEecCCCC-C-----CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH-------hHhhCC
Q 013019 323 HKKGAIVCIDGTFAT-P-----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLGG 389 (451)
Q Consensus 323 ~~~g~~lVVD~tfa~-~-----~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~-------~~~~G~ 389 (451)
+++|+++|+||++.. + +..+-...-.|+++ ++|.+++.. ...|.+++++++++.+... ......
T Consensus 249 ~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~--~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~ 325 (445)
T PRK09221 249 DKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIIT--FAKGLTNGA-IPMGAVIASDEIYDAFMQGPEYAIEFFHGYTY 325 (445)
T ss_pred HHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEE--eccccccCc-ccceeeEEcHHHHHhhccCcccccccccccCC
Confidence 999999999999632 1 11111122247765 789997542 2256678888888776421 111112
Q ss_pred CccHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc---CCCeEEEecCC
Q 013019 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEA---HPKVLLLFITL 437 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L~~---~p~V~~V~yPg 437 (451)
..+|..+..++..|+.+.. .+++..+..+.+.+.|++ +|.|..|+.-|
T Consensus 326 ~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~G 378 (445)
T PRK09221 326 SAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIG 378 (445)
T ss_pred CcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCc
Confidence 2466666665555655532 245555666666666654 46566665444
No 319
>PRK06541 hypothetical protein; Provisional
Probab=99.14 E-value=7.2e-09 Score=110.10 Aligned_cols=228 Identities=14% Similarity=0.147 Sum_probs=140.8
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc----C----CCeEEEcCCCCcch-HHHHHHh----h
Q 013019 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP----A----GGHIVTTTDCYRKT-RIFIETV----L 270 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~----~----GD~VIv~~~~Y~~t-~~~l~~~----l 270 (451)
.+.++...+|.++|+++... +.+.+++||++|+..++..... . ..+||.....|.+. ...+... .
T Consensus 91 ~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~ 170 (460)
T PRK06541 91 SYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAF 170 (460)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhh
Confidence 35678888899999998643 5778889999999998874432 1 35788888777663 2222100 0
Q ss_pred -hcCC---cEEEEeCC----------CC--------HHHHHHhhc---CCCeEEEEEeCCCCCcccccc----HHHHHHH
Q 013019 271 -PKMG---ITATVIDP----------AD--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (451)
Q Consensus 271 -~~~G---i~v~~vd~----------~D--------~d~Le~ai~---~~~tklV~lesPsNPtG~v~D----L~~Iael 321 (451)
..++ ..+..++. .+ ++.+++.++ +.++.+|++|...++.|.+.+ +++|.++
T Consensus 171 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~l 250 (460)
T PRK06541 171 KAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREI 250 (460)
T ss_pred ccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHH
Confidence 0000 01111211 11 256777774 235788999887888998877 9999999
Q ss_pred HHhcCCEEEEecCCC-CCCc-----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH--hh--CCCc
Q 013019 322 CHKKGAIVCIDGTFA-TPLN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VL--GGAL 391 (451)
Q Consensus 322 A~~~g~~lVVD~tfa-~~~~-----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--~~--G~~l 391 (451)
|+++|+++|+||++. .+.. ..-...-.|+++ ++|.+++. ....|++++++++++.+..... .. ....
T Consensus 251 c~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt--~gK~l~~G-~~pigav~~~~~i~~~~~~~~~~~~~~~T~~g 327 (460)
T PRK06541 251 CDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT--CAKGITSG-YSPLGAMIASDRLFEPFLDGPTMFLHGYTFGG 327 (460)
T ss_pred HHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--ecccccCC-ccceeEEEEcHHHHHHhhcCCCccccCCCCCC
Confidence 999999999999962 2211 111222358775 89999853 2236777888888877653211 11 1234
Q ss_pred cHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc---CCCeEEEecC
Q 013019 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEA---HPKVLLLFIT 436 (451)
Q Consensus 392 s~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L~~---~p~V~~V~yP 436 (451)
+|..+..++..|+.+.. ..++..+....+.+.|++ +|.|..|+..
T Consensus 328 np~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~ 377 (460)
T PRK06541 328 HPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGD 377 (460)
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence 66776666666665432 235555666666666644 4555555433
No 320
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.13 E-value=1e-08 Score=108.48 Aligned_cols=229 Identities=12% Similarity=0.138 Sum_probs=138.7
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------C-CCeEEEcCCCCcch-HHHHH--------
Q 013019 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKT-RIFIE-------- 267 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~-------~-GD~VIv~~~~Y~~t-~~~l~-------- 267 (451)
+.+|...+|.++|+++.. .+.+.+++||++|+..++..... + ..+||.....|.+. ...+.
T Consensus 86 ~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~ 165 (442)
T PRK13360 86 MGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNR 165 (442)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhh
Confidence 357888889999999874 36778889999999998874331 1 25788888887763 21110
Q ss_pred HhhhcCCcEEEEeCCC------------------CHHHHHHhhc---CCCeEEEEEeCCCCCcccccc----HHHHHHHH
Q 013019 268 TVLPKMGITATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (451)
Q Consensus 268 ~~l~~~Gi~v~~vd~~------------------D~d~Le~ai~---~~~tklV~lesPsNPtG~v~D----L~~IaelA 322 (451)
.........+.+++.. ..++|++++. .+++.+|++|......|.+.+ +++|.++|
T Consensus 166 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc 245 (442)
T PRK13360 166 KAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREIC 245 (442)
T ss_pred hccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 0001000112222211 1457777774 235889999988877788877 99999999
Q ss_pred HhcCCEEEEecCCC-CCC-----ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH-------hHhhCC
Q 013019 323 HKKGAIVCIDGTFA-TPL-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLGG 389 (451)
Q Consensus 323 ~~~g~~lVVD~tfa-~~~-----~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~-------~~~~G~ 389 (451)
+++|+++|+||++. .+. ...-...-.|++ +++|.+++.. +..|.+++++++.+.+... ......
T Consensus 246 ~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv--t~gK~l~gG~-~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~ 322 (442)
T PRK13360 246 DKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLL--TCAKGLTNGA-IPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTY 322 (442)
T ss_pred HHcCCEEEEechhhCCCCCccchhhhhcCCCCcee--eeeeccccCc-cceEEEEEcHHHHHHhhcCCccccccccCCCC
Confidence 99999999999962 211 112122235776 5799998631 2356677888887766431 111112
Q ss_pred CccHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH---cCCCeEEEecCCC
Q 013019 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILE---AHPKVLLLFITLL 438 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L~---~~p~V~~V~yPgL 438 (451)
..+|..+..++..|+.+.. .+++..+....+.+.|+ ++|.|..|+.-||
T Consensus 323 ~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl 376 (442)
T PRK13360 323 SGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGL 376 (442)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccce
Confidence 2466666666555655432 23444455555555554 4566666654443
No 321
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.13 E-value=1.2e-08 Score=107.91 Aligned_cols=226 Identities=15% Similarity=0.132 Sum_probs=133.4
Q ss_pred CCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcchHHHHHHhhh-----cCCc-
Q 013019 207 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP-----KMGI- 275 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t~~~l~~~l~-----~~Gi- 275 (451)
+.++...+|.++|+++.+. +..++++||++|+..++.... ...++||..+..|.+.....-.+-. ..+.
T Consensus 96 ~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~ 175 (443)
T PRK06058 96 TPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFG 175 (443)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccC
Confidence 4567778899999988752 467888999999999887321 2246888888888774322111000 0010
Q ss_pred ----EEEEeC---C-CC---------------HHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCE
Q 013019 276 ----TATVID---P-AD---------------MEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (451)
Q Consensus 276 ----~v~~vd---~-~D---------------~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~ 328 (451)
.+..++ . .+ ++.+++.+..+++.+|++|....-.|.+.+ +++|.++|++||++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gil 255 (443)
T PRK06058 176 PFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVV 255 (443)
T ss_pred CCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 111111 0 11 233444444345899998854433344432 89999999999999
Q ss_pred EEEecCCCCC-Cc-----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHh
Q 013019 329 VCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (451)
Q Consensus 329 lVVD~tfa~~-~~-----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrg 402 (451)
+|+||++... .. ..-...-.|+++. +|.+++ | ...|++++++++++.+...........+|..+..++..
T Consensus 256 lI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~--gK~l~~-G-~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~ 331 (443)
T PRK06058 256 FIADEVQTGFARTGAWFACEHEGIVPDLITT--AKGIAG-G-LPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAA 331 (443)
T ss_pred EEEeccccCCCcChhhhHHHhcCCCCCEEEE--cccccC-C-CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHH
Confidence 9999996422 11 1111223488874 799985 3 46788889988887765332212223467776666666
Q ss_pred hHHHHH--HHHHHHHHHHHHHHHHH----cCCCeEEEecC
Q 013019 403 MKTLHL--RVQQQNSTALRMAEILE----AHPKVLLLFIT 436 (451)
Q Consensus 403 L~tl~~--Rl~~~~~nA~~Lae~L~----~~p~V~~V~yP 436 (451)
|+.+.. -.++..+....+.+.|+ +++.|..|+.-
T Consensus 332 L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~ 371 (443)
T PRK06058 332 IETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGR 371 (443)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeecc
Confidence 665532 12333344445555553 35766666543
No 322
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.13 E-value=3e-09 Score=110.95 Aligned_cols=208 Identities=19% Similarity=0.228 Sum_probs=130.9
Q ss_pred HHHHHHHHhhhCCCcE--EEeCCHHH---HHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHH
Q 013019 213 VVVEEKMSALEGAEST--VIMASGMS---ASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (451)
Q Consensus 213 ~~Lee~LA~l~gae~~--vv~sSG~a---Ai~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~ 287 (451)
-+++..|+++.|-+-+ -+...+++ |+..+++.--+.+++|+++...|+.+...++..+...|+++..++..+...
T Consensus 113 fe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~ 192 (429)
T PF02347_consen 113 FEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGT 192 (429)
T ss_dssp HHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCS
T ss_pred HHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCC
Confidence 4578999999997642 34444553 333333333334569999999999999888888888899998877432111
Q ss_pred HHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC--CCCCCccccccCCCcEEEECCcccCCcc---
Q 013019 288 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT--FATPLNQKALSLGADLVLHSATKFIGGH--- 362 (451)
Q Consensus 288 Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t--fa~~~~~~pl~~GaDiVv~S~SK~l~G~--- 362 (451)
.. ++ ++.+|++++|+ -.|.+.|+++|.+++|++|+++++ .+ -+-.....|.++|+||++.+ +|.||.+
T Consensus 193 ~d---~~-~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~ 265 (429)
T PF02347_consen 193 TD---DD-DTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGF 265 (429)
T ss_dssp B----ST-TEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CC
T ss_pred cc---cc-CeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCC
Confidence 11 34 59999999998 589999999999999999999887 54 23345678899999999887 7766622
Q ss_pred ccceeEEEEeCHHHHHHHHHH----------------------------hHh--hCCC--ccH--HHHHHHHHhhHHHHH
Q 013019 363 NDVLAGSISGSGKLVTQIRNL----------------------------HHV--LGGA--LNP--NAAYLIIRGMKTLHL 408 (451)
Q Consensus 363 gdv~gG~Iv~~~eli~~lr~~----------------------------~~~--~G~~--ls~--~~a~l~lrgL~tl~~ 408 (451)
|.--.|++.++++++.++-.. +.. .+.. +-. ...|+.+.|-+.|..
T Consensus 266 GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~ 345 (429)
T PF02347_consen 266 GGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLRE 345 (429)
T ss_dssp C-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHH
Confidence 112378988887765543210 000 1111 111 124566666677776
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q 013019 409 RVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 409 Rl~~~~~nA~~Lae~L~~~ 427 (451)
--++...+|..+++.|++.
T Consensus 346 iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 346 IAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp HHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 6778889999999999987
No 323
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.12 E-value=1.5e-08 Score=106.58 Aligned_cols=228 Identities=18% Similarity=0.239 Sum_probs=145.0
Q ss_pred CCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHHcc-C-CCeEEEcCCCCcchH-HHHHHhh-h--------cC
Q 013019 207 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALVP-A-GGHIVTTTDCYRKTR-IFIETVL-P--------KM 273 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~g-ae~~vv~sSG~aAi~~al~all~-~-GD~VIv~~~~Y~~t~-~~l~~~l-~--------~~ 273 (451)
+.++...+|.++|.++.. .+.+.+++||++|+..++..... . ..+||.....|.+.. ..+...- . ..
T Consensus 90 ~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 169 (428)
T PRK12389 90 TPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSA 169 (428)
T ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCC
Confidence 567778888889888764 46778889999999998875432 2 356887777776632 2221100 0 01
Q ss_pred Cc------EEEEeCCCCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCC---
Q 013019 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (451)
Q Consensus 274 Gi------~v~~vd~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~--- 338 (451)
++ .+..++..|++.+++.+++ +++.+|++|...+..|.+.+ +++|.++|+++|+++|+||++...
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~ 249 (428)
T PRK12389 170 GVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFM 249 (428)
T ss_pred CCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccC
Confidence 11 2334456688999888852 24889999988777787776 999999999999999999985432
Q ss_pred Cc--cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh-HhhC--CCccHHHHHHHHHhhHHHHH--HHH
Q 013019 339 LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLG--GALNPNAAYLIIRGMKTLHL--RVQ 411 (451)
Q Consensus 339 ~~--~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-~~~G--~~ls~~~a~l~lrgL~tl~~--Rl~ 411 (451)
.. +.-...-.|++ +++|.++|. ...|.+++++++++.+.... ...+ ...+|..+..++..|+.+.. .++
T Consensus 250 ~~~a~~~~gv~PDiv--t~gK~lggG--~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~ 325 (428)
T PRK12389 250 YGGAQDLLGVEPDLT--ALGKIIGGG--LPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYE 325 (428)
T ss_pred cchhhHHhCCCCCee--eechhhcCC--CceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHH
Confidence 11 11122235776 479999864 34666788888888774211 1112 23467776666666665532 244
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEE-ecCCC
Q 013019 412 QQNSTALRMAEILEA----HPKVLLL-FITLL 438 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~----~p~V~~V-~yPgL 438 (451)
+..+..++|.+.|++ +|.+..+ ...|+
T Consensus 326 ~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g~ 357 (428)
T PRK12389 326 KLDRLGAMLEEGILEAAEKHGITITINRLKGA 357 (428)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEecCcE
Confidence 555556666665553 6654444 44433
No 324
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.12 E-value=1.6e-08 Score=108.52 Aligned_cols=228 Identities=13% Similarity=0.105 Sum_probs=137.4
Q ss_pred CCchhHHHHHHHHHhhhC-C--CcEEEeCCHHHHHHHHHHHHc------c-CC-CeEEEcCCCCcch-HHHHHHh-----
Q 013019 207 YGNPTTVVVEEKMSALEG-A--ESTVIMASGMSASTVMLLALV------P-AG-GHIVTTTDCYRKT-RIFIETV----- 269 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~g-a--e~~vv~sSG~aAi~~al~all------~-~G-D~VIv~~~~Y~~t-~~~l~~~----- 269 (451)
+.++...+|.++|.++.. . +.+++++||++|+..++.... . +| .+||..+..|.+. ...+...
T Consensus 130 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~ 209 (504)
T PLN02760 130 RTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPAL 209 (504)
T ss_pred cCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhh
Confidence 356777889999988853 2 357778999999999988653 1 22 4677777777663 2222100
Q ss_pred hhcCCcE---EEEeCCC----------C--------HHHHHHhhc---CCCeEEEEEeCCCCCcccccc----HHHHHHH
Q 013019 270 LPKMGIT---ATVIDPA----------D--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (451)
Q Consensus 270 l~~~Gi~---v~~vd~~----------D--------~d~Le~ai~---~~~tklV~lesPsNPtG~v~D----L~~Iael 321 (451)
...++.. +..++.. + .++|++.+. ++++.+|++|......|.+.+ +++|.++
T Consensus 210 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~l 289 (504)
T PLN02760 210 HQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAV 289 (504)
T ss_pred ccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 0111110 2222211 1 135666663 234889999988777787777 9999999
Q ss_pred HHhcCCEEEEecCCC-CCCc-----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH-------hHhhC
Q 013019 322 CHKKGAIVCIDGTFA-TPLN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLG 388 (451)
Q Consensus 322 A~~~g~~lVVD~tfa-~~~~-----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~-------~~~~G 388 (451)
|++||+++|+||++. .+.. +.-...-.||++ ++|.+++.. +..|.+++++++++.+... .....
T Consensus 290 c~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivt--lgK~lggG~-~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T 366 (504)
T PLN02760 290 LKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVS--LAKALSSAY-MPIGAVLVSPEISDVIHSQSNKLGSFAHGFT 366 (504)
T ss_pred HHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEE--ecccccCCc-cccceEeecHHHHhhhhcccccccCcccCCC
Confidence 999999999999862 2111 121222357665 799998631 2256678888888877532 11111
Q ss_pred CCccHHHHHHHHHhhHHHHHH--HHHHHHHHHHHHHHH---HcCCCeEEEecCC
Q 013019 389 GALNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAEIL---EAHPKVLLLFITL 437 (451)
Q Consensus 389 ~~ls~~~a~l~lrgL~tl~~R--l~~~~~nA~~Lae~L---~~~p~V~~V~yPg 437 (451)
...+|..+..++..|+.+... +++..+....|.+.| .++|.|..|+.-|
T Consensus 367 ~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~G 420 (504)
T PLN02760 367 YSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTG 420 (504)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCc
Confidence 223677777666666655432 344445555555544 4467666665443
No 325
>PRK07482 hypothetical protein; Provisional
Probab=99.10 E-value=2.7e-08 Score=105.73 Aligned_cols=230 Identities=11% Similarity=0.050 Sum_probs=137.7
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------C-CCeEEEcCCCCcchH-HHHHH-----h
Q 013019 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTR-IFIET-----V 269 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~-------~-GD~VIv~~~~Y~~t~-~~l~~-----~ 269 (451)
.+.++...+|.++|+++.. .+.+.+++||++|+..++..... + ..+||.....|.+.. ..+.. .
T Consensus 90 ~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~ 169 (461)
T PRK07482 90 GHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLF 169 (461)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchh
Confidence 4567888889999999874 36777889999999999875531 1 246888887777632 11100 0
Q ss_pred hhcCC---cEEEEeCCC------------------CHHHHHHhhc---CCCeEEEEEeCCCCCcccccc----HHHHHHH
Q 013019 270 LPKMG---ITATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (451)
Q Consensus 270 l~~~G---i~v~~vd~~------------------D~d~Le~ai~---~~~tklV~lesPsNPtG~v~D----L~~Iael 321 (451)
-..++ -.+..++.. +++++++.+. .+++.+|++|....-.|.+.+ +++|.++
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~l 249 (461)
T PRK07482 170 HQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAV 249 (461)
T ss_pred hhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 00011 011111110 3567777774 235899999977655555532 7899999
Q ss_pred HHhcCCEEEEecCCCC----C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh-----HhhC--
Q 013019 322 CHKKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLG-- 388 (451)
Q Consensus 322 A~~~g~~lVVD~tfa~----~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-----~~~G-- 388 (451)
|++||+++|+||++.. + +..+-...-.||++ +.|.++|.- ...|.+++++++.+.+.... ...+
T Consensus 250 c~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T 326 (461)
T PRK07482 250 LKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLIT--VAKGLTSAY-APLSGSIVGEKVWDVLEQGSDEHGAIGHGWT 326 (461)
T ss_pred HHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEE--EccccccCc-cccceeeecHHHHHHHhcccccCCccccCCC
Confidence 9999999999998532 1 11222223368888 699998641 12566677888777664210 0112
Q ss_pred CCccHHHHHHHHHhhHHHHHH--HHHHHHHHHHHHHHH----HcCCCeEEEecCCC
Q 013019 389 GALNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAEIL----EAHPKVLLLFITLL 438 (451)
Q Consensus 389 ~~ls~~~a~l~lrgL~tl~~R--l~~~~~nA~~Lae~L----~~~p~V~~V~yPgL 438 (451)
...+|..+..++..|+.+... +++..+....|.+.| +++|.|..|+.-|+
T Consensus 327 ~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl 382 (461)
T PRK07482 327 YSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGM 382 (461)
T ss_pred CCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecee
Confidence 134677666666566554321 233334444444444 46787777765443
No 326
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.10 E-value=4.3e-09 Score=118.75 Aligned_cols=158 Identities=21% Similarity=0.295 Sum_probs=122.8
Q ss_pred HHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc---cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHH
Q 013019 213 VVVEEKMSALEGAE--STVIMASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (451)
Q Consensus 213 ~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all---~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~ 287 (451)
-+++..+++|.|-+ ++-++..++++..+++++.. +++++|++++.+|+.+...++..+...|+++..+| +++
T Consensus 112 ~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~---~~~ 188 (939)
T TIGR00461 112 LNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD---CSD 188 (939)
T ss_pred HHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc---HHH
Confidence 34688999999975 45777777766666666542 23478999999999999888878888999988875 466
Q ss_pred HHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCC-CCCccccccCCCcEEEECCcccC-----Cc
Q 013019 288 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLHSATKFI-----GG 361 (451)
Q Consensus 288 Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa-~~~~~~pl~~GaDiVv~S~SK~l-----~G 361 (451)
|++.+ + +.+|++.+|+ -+|.+.|+++|++++|++|++++++.-.. ..+..+|.++|+||++.+..++- ||
T Consensus 189 l~~~~--~-~~~v~~q~Pn-~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GG 264 (939)
T TIGR00461 189 IKKAV--D-VFGCLLQYPA-TDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGG 264 (939)
T ss_pred HhhcC--C-EEEEEEECCC-CCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCC
Confidence 77666 2 7889998887 58999999999999999999999966543 34567888999999988766653 35
Q ss_pred cccceeEEEEeCHHHHHHH
Q 013019 362 HNDVLAGSISGSGKLVTQI 380 (451)
Q Consensus 362 ~gdv~gG~Iv~~~eli~~l 380 (451)
++ +|++..++++..++
T Consensus 265 P~---aG~~a~~~~l~r~l 280 (939)
T TIGR00461 265 PH---AAFFAVKDEYNRKM 280 (939)
T ss_pred Cc---eeeeeecHhhHhhC
Confidence 54 89999888776543
No 327
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.10 E-value=1.8e-08 Score=106.06 Aligned_cols=229 Identities=15% Similarity=0.124 Sum_probs=138.3
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc------C-CCeEEEcCCCCcch-HHHHHH-------
Q 013019 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP------A-GGHIVTTTDCYRKT-RIFIET------- 268 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~------~-GD~VIv~~~~Y~~t-~~~l~~------- 268 (451)
.+.++...+|.++|+++.+. +...+++||++|+..++..... . ..+||.....|.+. ...+..
T Consensus 82 ~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~ 161 (428)
T PRK07986 82 GITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSM 161 (428)
T ss_pred ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhh
Confidence 34678888899999998753 5677788999999998875432 2 35788888888762 211110
Q ss_pred --hhhcCCcEEEEeC-----------CCCHHHHHHhhcC--CCeEEEEEeCC-CCCccccc----cHHHHHHHHHhcCCE
Q 013019 269 --VLPKMGITATVID-----------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCV----DVKLVSDLCHKKGAI 328 (451)
Q Consensus 269 --~l~~~Gi~v~~vd-----------~~D~d~Le~ai~~--~~tklV~lesP-sNPtG~v~----DL~~IaelA~~~g~~ 328 (451)
......-.+.+++ ..|++++++.++. .++.+|++|.. ..-.|... -+++|.++|+++|++
T Consensus 162 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~l 241 (428)
T PRK07986 162 HSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGIL 241 (428)
T ss_pred hhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 0000000111221 1256677877752 24789999974 43334322 289999999999999
Q ss_pred EEEecCCCCCC-------ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh-----HhhCCCccHHHH
Q 013019 329 VCIDGTFATPL-------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGALNPNAA 396 (451)
Q Consensus 329 lVVD~tfa~~~-------~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-----~~~G~~ls~~~a 396 (451)
+|+||++ +++ ...-...-.||++ ++|.++|. -+.+|.+++++++.+.+.... .......+|..+
T Consensus 242 LI~DEv~-tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~gG-~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~ 317 (428)
T PRK07986 242 LIADEIA-TGFGRTGKLFACEHAGIAPDILC--LGKALTGG-TMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLAC 317 (428)
T ss_pred EEEeccc-cCCccCCCeeeecccCCCCCEEE--echhhhCC-cccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHH
Confidence 9999996 322 1111122347775 89999753 234677778888888775421 111122457776
Q ss_pred HHHHHhhHHHHH--HHHHHHHHHHHHHHHHH---cCCCeEEEecCCC
Q 013019 397 YLIIRGMKTLHL--RVQQQNSTALRMAEILE---AHPKVLLLFITLL 438 (451)
Q Consensus 397 ~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L~---~~p~V~~V~yPgL 438 (451)
..++..|+.+.. .+++..+..+++.+.|+ ++|.|..|+.-|+
T Consensus 318 aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl 364 (428)
T PRK07986 318 AVANASLSLLESGDWQQQVAAIEAQLREELAPLRDAPMVADVRVLGA 364 (428)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccce
Confidence 666666665542 24555555555655554 4666766665544
No 328
>PRK05965 hypothetical protein; Provisional
Probab=99.09 E-value=2.8e-08 Score=105.59 Aligned_cols=229 Identities=17% Similarity=0.172 Sum_probs=138.5
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------C-CCeEEEcCCCCcchHHH-HHH-----hh
Q 013019 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIF-IET-----VL 270 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~-------~-GD~VIv~~~~Y~~t~~~-l~~-----~l 270 (451)
+.++...+|.++|.++.. .+.+.+++||++|+..++..... + ..+||.....|.+.... +.. .-
T Consensus 87 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~ 166 (459)
T PRK05965 87 FGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFH 166 (459)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhh
Confidence 457777889999998874 35667778999999998875431 2 24688888888773211 110 00
Q ss_pred hcCCc---EEEEeCC---------CC--------HHHHHHhhcC---CCeEEEEEeCCCCCcccccc----HHHHHHHHH
Q 013019 271 PKMGI---TATVIDP---------AD--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (451)
Q Consensus 271 ~~~Gi---~v~~vd~---------~D--------~d~Le~ai~~---~~tklV~lesPsNPtG~v~D----L~~IaelA~ 323 (451)
..++. .+..++. .| ++++++.+.. +++.+|++|......|.+.+ +++|.++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~ 246 (459)
T PRK05965 167 RGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACR 246 (459)
T ss_pred cccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHH
Confidence 01111 1112211 12 2567777742 35899999987766665542 789999999
Q ss_pred hcCCEEEEecCCCC----C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh-----HhhC--CC
Q 013019 324 KKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLG--GA 390 (451)
Q Consensus 324 ~~g~~lVVD~tfa~----~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-----~~~G--~~ 390 (451)
+||+++|+||++.. + +..+-...-.||++ +.|.++|. -+..|.+++++++.+.+.... ...+ ..
T Consensus 247 ~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG-~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~ 323 (459)
T PRK05965 247 ELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT--VAKGLTSG-YVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYS 323 (459)
T ss_pred HcCCEEEEechhccCccCchhhhHhhcCCCCCeEE--echhhccC-CcceeEEEEcHHHHHHHhccccccccccccCCCC
Confidence 99999999998532 1 12222223368888 68999864 124677788888887764210 0112 23
Q ss_pred ccHHHHHHHHHhhHHHHHH--HHHHHHHHHHHHHHHH---cCCCeEEEecCCC
Q 013019 391 LNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAEILE---AHPKVLLLFITLL 438 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~R--l~~~~~nA~~Lae~L~---~~p~V~~V~yPgL 438 (451)
.+|..+..++..|+.+... +++..+....|.+.|+ ++|.|..|+.-|+
T Consensus 324 gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl 376 (459)
T PRK05965 324 AHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGL 376 (459)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecce
Confidence 4677776666666655331 3333344444444443 4677777766554
No 329
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.09 E-value=2.8e-09 Score=104.65 Aligned_cols=179 Identities=17% Similarity=0.246 Sum_probs=111.9
Q ss_pred cccCCCchh-----HHHHHHHHHhhhCC---CcEEEeCCHH-HHHHHHHHHHc---cCCC--eEEEc-CCCCcchHHHH-
Q 013019 203 EYGRYGNPT-----TVVVEEKMSALEGA---ESTVIMASGM-SASTVMLLALV---PAGG--HIVTT-TDCYRKTRIFI- 266 (451)
Q Consensus 203 ~Y~R~~npt-----~~~Lee~LA~l~ga---e~~vv~sSG~-aAi~~al~all---~~GD--~VIv~-~~~Y~~t~~~l- 266 (451)
.-.+|++|. .++|.+.+.+-+|- +..+..|+|+ .+.+-++..+- ..|+ +|+.+ .|.|-+.-...
T Consensus 66 ~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l 145 (417)
T COG3977 66 ALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGL 145 (417)
T ss_pred HHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhcccccccc
Confidence 345565554 44445555555563 6788889998 55555554432 3354 35554 56665532110
Q ss_pred -HHhhhcCCcEEEEeC------CCCHHHHHHhhcCCCeEEEEEeCCCCCccccc---cHHHHHHHHHhcCCEEEEecCCC
Q 013019 267 -ETVLPKMGITATVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 267 -~~~l~~~Gi~v~~vd------~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~---DL~~IaelA~~~g~~lVVD~tfa 336 (451)
...+-...-+++..+ ..|.++|. +.+ .+.+|.+.-|+||||.+. .+.+|.++|++||+++++|++|+
T Consensus 146 ~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e-~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg 222 (417)
T COG3977 146 EEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGE-STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYG 222 (417)
T ss_pred CccceeeccCCcccccccceeeccCHHHcc--ccc-ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccC
Confidence 011100111111111 23666664 445 489999999999999997 37788888999999999999999
Q ss_pred CCCcc------ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHh
Q 013019 337 TPLNQ------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV 386 (451)
Q Consensus 337 ~~~~~------~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~ 386 (451)
.|+.. .++-...-+.+.|+||. |.+| .+.|.+++++++++.+..+...
T Consensus 223 ~PFP~iifsd~~~~w~~NiilC~SLSK~-GLPG-~R~GIiIane~viqaitnmn~i 276 (417)
T COG3977 223 VPFPGIIFSDATPLWNENIILCMSLSKL-GLPG-SRCGIIIANEKVIQAITNMNGI 276 (417)
T ss_pred CCCCceecccccccCCCCEEEEeehhhc-CCCC-cceeEEEccHHHHHHHHhccce
Confidence 87532 22222234788999996 3344 5899999999999988876543
No 330
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.09 E-value=1.5e-08 Score=107.08 Aligned_cols=227 Identities=13% Similarity=0.061 Sum_probs=132.4
Q ss_pred CCchhHHHHHHHHHhhhCC----CcEEEe-CCHHHHHHHHHHHHcc-C-CCeEEEcCCCCcchHHHHHHhhh----c--C
Q 013019 207 YGNPTTVVVEEKMSALEGA----ESTVIM-ASGMSASTVMLLALVP-A-GGHIVTTTDCYRKTRIFIETVLP----K--M 273 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga----e~~vv~-sSG~aAi~~al~all~-~-GD~VIv~~~~Y~~t~~~l~~~l~----~--~ 273 (451)
+.++...+|.++|.++... ...+++ +||++|+..++..... . ..+|+.....|.+.......... + +
T Consensus 79 ~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~ 158 (442)
T TIGR00709 79 LTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAV 158 (442)
T ss_pred cCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccC
Confidence 5678888899999998753 244454 7999999998875432 2 35688888877774322211110 0 0
Q ss_pred C---cEEEEeCCCC-------------H----HHHHHhhc-----CCCeEEEEEeCCCCCccccc-c---HHHHHHHHHh
Q 013019 274 G---ITATVIDPAD-------------M----EGLEAALN-----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHK 324 (451)
Q Consensus 274 G---i~v~~vd~~D-------------~----d~Le~ai~-----~~~tklV~lesPsNPtG~v~-D---L~~IaelA~~ 324 (451)
+ ..+.+++..+ . +.+++.++ ..++.+|++|.+.+..|.+. + +++|.++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~ 238 (442)
T TIGR00709 159 GMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRK 238 (442)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 0 1122222111 1 12334442 12488999998877666553 3 8899999999
Q ss_pred cCCEEEEecCCCCC-Cc-----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHH
Q 013019 325 KGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL 398 (451)
Q Consensus 325 ~g~~lVVD~tfa~~-~~-----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l 398 (451)
||+++|.||++... .. ..-...-.|+++ ++|.+++ | ...|+++++++ ++.+...........+|..+..
T Consensus 239 ~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~-G-~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aa 313 (442)
T TIGR00709 239 HDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--MSKAVGG-G-LPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVT 313 (442)
T ss_pred cCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--EcccccC-C-cccEEEEEchH-HhccCCCcCCCCCCcCHHHHHH
Confidence 99999999996421 11 111222358888 7999987 4 56777777777 4433211111112346776666
Q ss_pred HHHhhHHHHH-H-HHHHHHHHHHHHHHHH----cCCCeEEEecCCC
Q 013019 399 IIRGMKTLHL-R-VQQQNSTALRMAEILE----AHPKVLLLFITLL 438 (451)
Q Consensus 399 ~lrgL~tl~~-R-l~~~~~nA~~Lae~L~----~~p~V~~V~yPgL 438 (451)
++..|+.+.. . .++..+....|.+.|+ ++|.|..|+.-||
T Consensus 314 a~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl 359 (442)
T TIGR00709 314 GTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGL 359 (442)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccce
Confidence 6666665432 1 2333344444444443 5777777776554
No 331
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.09 E-value=2e-08 Score=106.73 Aligned_cols=232 Identities=18% Similarity=0.182 Sum_probs=138.7
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcc-hHHHHHHh-h---h-cC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRK-TRIFIETV-L---P-KM 273 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~-t~~~l~~~-l---~-~~ 273 (451)
..++.++...+|.++|+++.+. +...+.+||++|+..++.... ....+|+.....|.+ +...+... . . .+
T Consensus 107 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~ 186 (459)
T PRK06082 107 PRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGM 186 (459)
T ss_pred cCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCC
Confidence 3467788899999999999853 467777899999998886442 123577777777766 32222110 0 0 00
Q ss_pred C---cEEEEeC--------CCC--------HHHHHHhhcC-CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEE
Q 013019 274 G---ITATVID--------PAD--------MEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVC 330 (451)
Q Consensus 274 G---i~v~~vd--------~~D--------~d~Le~ai~~-~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lV 330 (451)
+ -.+..++ ..+ ++.+++.++. .++.+|++|...+..+.+.+ +++|.++|++||+++|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI 266 (459)
T PRK06082 187 GPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLI 266 (459)
T ss_pred CCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 0 0111221 111 3457777752 24889999987765444455 8999999999999999
Q ss_pred EecCCCC----C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH
Q 013019 331 IDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (451)
Q Consensus 331 VD~tfa~----~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~ 404 (451)
+||++.. + +..+-...-.||++ ++|.++|.. ...|.+++++++.+.............+|..+..++..|+
T Consensus 267 ~DEV~tG~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~-~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 343 (459)
T PRK06082 267 IDEIPNGMGRTGEWFTHQAYGIEPDILC--IGKGLGGGL-VPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIE 343 (459)
T ss_pred EechhhCCCccchhhHhHhhCCCCCEEE--ecccccCCC-CcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 9999542 1 11122223368887 899998742 2356777777765332210011122346776666665666
Q ss_pred HHHH--HHHHHHHHHHHHHHHHH----cCCCeEEEecCCC
Q 013019 405 TLHL--RVQQQNSTALRMAEILE----AHPKVLLLFITLL 438 (451)
Q Consensus 405 tl~~--Rl~~~~~nA~~Lae~L~----~~p~V~~V~yPgL 438 (451)
.+.. .+++..+..+.|.+.|+ ++|.|..|+.-||
T Consensus 344 ~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 383 (459)
T PRK06082 344 VIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGL 383 (459)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccc
Confidence 5532 23444455555555553 4677777766554
No 332
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.07 E-value=2.2e-08 Score=106.24 Aligned_cols=230 Identities=14% Similarity=0.161 Sum_probs=137.8
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-------C-CCeEEEcCCCCcchH-HHHH-------
Q 013019 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTR-IFIE------- 267 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~-------~-GD~VIv~~~~Y~~t~-~~l~------- 267 (451)
.+.++...+|.++|+++.+. +.+.+++||++|+..++....+ + ..+||.....|.+.. ..+.
T Consensus 93 ~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~ 172 (453)
T PRK06943 93 GCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALF 172 (453)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhh
Confidence 35677888899999998764 4677788999999998876421 2 357888888887732 1110
Q ss_pred -HhhhcCCcEEEEeCC-----------------CCHHHHHHhhcC--CCeEEEEEeC-CCCCccccc-c---HHHHHHHH
Q 013019 268 -TVLPKMGITATVIDP-----------------ADMEGLEAALNN--NNVSLFFTES-PTNPFLRCV-D---VKLVSDLC 322 (451)
Q Consensus 268 -~~l~~~Gi~v~~vd~-----------------~D~d~Le~ai~~--~~tklV~les-PsNPtG~v~-D---L~~IaelA 322 (451)
......-..+..++. .+++++++.++. +++.+|++|. +..-.|.+. + +++|.++|
T Consensus 173 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc 252 (453)
T PRK06943 173 KDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALC 252 (453)
T ss_pred hcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHH
Confidence 000000001111211 124677777742 3589999997 355455543 2 88999999
Q ss_pred HhcCCEEEEecCCCC----C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh----HhhCC--C
Q 013019 323 HKKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLGG--A 390 (451)
Q Consensus 323 ~~~g~~lVVD~tfa~----~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~----~~~G~--~ 390 (451)
++||+++|+||++.. + +..+-...-.||++ +.|.++|. -+..|.+++++++.+.+.... ...+. .
T Consensus 253 ~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt--~gKgl~gG-~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~ 329 (453)
T PRK06943 253 DRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLC--LSKGISGG-YLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYT 329 (453)
T ss_pred HHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEe--eehhhccC-cccceEEEEcHHHHHhhcccCccCCccCCCCCC
Confidence 999999999998532 1 11122223368888 68998864 124677788888887764211 01121 2
Q ss_pred ccHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHH---HcCCCeEEEecCCC
Q 013019 391 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEIL---EAHPKVLLLFITLL 438 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L---~~~p~V~~V~yPgL 438 (451)
.+|..+..++..|+.+.. -+++..+..++|.+.| .++|.|..|+.-|+
T Consensus 330 gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl 382 (453)
T PRK06943 330 GNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRHLRQRGT 382 (453)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEeEecccc
Confidence 366666666655655532 1344444444555544 34677776665444
No 333
>PRK07678 aminotransferase; Validated
Probab=99.07 E-value=2.6e-08 Score=105.58 Aligned_cols=228 Identities=14% Similarity=0.159 Sum_probs=137.1
Q ss_pred CCchhHHHHHHHHHhhhCCC-cEEEeCCHHHHHHHHHHHHcc-------CC-CeEEEcCCCCcchH-HHHHHh-------
Q 013019 207 YGNPTTVVVEEKMSALEGAE-STVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTR-IFIETV------- 269 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae-~~vv~sSG~aAi~~al~all~-------~G-D~VIv~~~~Y~~t~-~~l~~~------- 269 (451)
+.++...+|.++|.++.+.. .+.+++||++|+..++..... +| .+||.....|.+.. ..+...
T Consensus 86 ~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~ 165 (451)
T PRK07678 86 QSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKY 165 (451)
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCccccc
Confidence 56777888999999988653 566668999999998875432 23 56888887776632 222100
Q ss_pred -hhcCCcEEEEeCCC--------------C---HHHHHHhhc---CCCeEEEEEeCCCCCcccccc----HHHHHHHHHh
Q 013019 270 -LPKMGITATVIDPA--------------D---MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (451)
Q Consensus 270 -l~~~Gi~v~~vd~~--------------D---~d~Le~ai~---~~~tklV~lesPsNPtG~v~D----L~~IaelA~~ 324 (451)
.....-.+..++.. | ++.+++.++ ++++.+|++|....-.|.+.+ +++|.++|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~ 245 (451)
T PRK07678 166 KYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQK 245 (451)
T ss_pred ccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHH
Confidence 00000011222211 1 223566663 235899999977655565543 8999999999
Q ss_pred cCCEEEEecCCCC-CC-----ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh------HhhCCCcc
Q 013019 325 KGAIVCIDGTFAT-PL-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH------HVLGGALN 392 (451)
Q Consensus 325 ~g~~lVVD~tfa~-~~-----~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~------~~~G~~ls 392 (451)
||+++|+||++.. +. ..+-...-.||++ ++|.++|.. +..|.+++++++.+.+.... .......+
T Consensus 246 ~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt--~gK~lggG~-~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gn 322 (451)
T PRK07678 246 HGALLISDEVICGFGRTGKAFGFMNYGVKPDIIT--MAKGITSAY-LPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGN 322 (451)
T ss_pred cCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEE--eecccccCC-cceeEEEEcHHHHHHHhccCcccccccCCCCCcC
Confidence 9999999998532 11 1121223368886 699998752 34788888988887765311 11112346
Q ss_pred HHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHH----HcCCCeEEEecCC
Q 013019 393 PNAAYLIIRGMKTLHL--RVQQQNSTALRMAEIL----EAHPKVLLLFITL 437 (451)
Q Consensus 393 ~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L----~~~p~V~~V~yPg 437 (451)
|..+..++..|+.+.. .+++..+..+.|.+.| +++|.|..|+.-|
T Consensus 323 p~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~G 373 (451)
T PRK07678 323 PAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKG 373 (451)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeec
Confidence 7776666666665543 2344444444444444 4567766665443
No 334
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.04 E-value=3.3e-08 Score=104.73 Aligned_cols=196 Identities=14% Similarity=0.139 Sum_probs=117.2
Q ss_pred CCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcchHHHHHHhhh-----c--CC
Q 013019 207 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP-----K--MG 274 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t~~~l~~~l~-----~--~G 274 (451)
+.++...+|.++|+++.+. +.+.+++||++|+..++.... ....+||.....|.+.....-..-. + ++
T Consensus 94 ~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~ 173 (451)
T PRK06918 94 MMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFG 173 (451)
T ss_pred cccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCC
Confidence 4567888899999998753 467778899999999887442 1234688877777663321111100 0 01
Q ss_pred ---cEEEEeCCCC-----------------HHHHHHhh----cCCCeEEEEEeCCCCCccccc---c-HHHHHHHHHhcC
Q 013019 275 ---ITATVIDPAD-----------------MEGLEAAL----NNNNVSLFFTESPTNPFLRCV---D-VKLVSDLCHKKG 326 (451)
Q Consensus 275 ---i~v~~vd~~D-----------------~d~Le~ai----~~~~tklV~lesPsNPtG~v~---D-L~~IaelA~~~g 326 (451)
..+..++..+ ++.+++.+ .++++.+|++|....-.|.+. + +++|.++|++||
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~g 253 (451)
T PRK06918 174 PFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHG 253 (451)
T ss_pred CCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 1122221110 12333333 233588999986554345433 2 889999999999
Q ss_pred CEEEEecCCCCC-Ccccc---ccCC--CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHH
Q 013019 327 AIVCIDGTFATP-LNQKA---LSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII 400 (451)
Q Consensus 327 ~~lVVD~tfa~~-~~~~p---l~~G--aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~l 400 (451)
+++|+||++... ....+ ..++ .|++ +++|.+++ | ...|++++++++++.+...........++..+..++
T Consensus 254 illI~DEV~tg~gr~g~~~a~~~~~v~pDi~--t~sK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~ 329 (451)
T PRK06918 254 ILFVADEIQTGFARTGKYFAIEHFDVVPDLI--TVSKSLGA-G-VPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAAL 329 (451)
T ss_pred CEEEEeccccCcCccCceehhHhcCCCCCEE--eeehhhcC-C-CccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHH
Confidence 999999996432 11111 1223 5644 79999984 4 578999999988887654332222334666665544
Q ss_pred HhhHHH
Q 013019 401 RGMKTL 406 (451)
Q Consensus 401 rgL~tl 406 (451)
..++.+
T Consensus 330 a~l~~i 335 (451)
T PRK06918 330 AVLDII 335 (451)
T ss_pred HHHHHH
Confidence 444433
No 335
>PRK07480 putative aminotransferase; Validated
Probab=99.04 E-value=5.1e-08 Score=103.51 Aligned_cols=230 Identities=16% Similarity=0.179 Sum_probs=135.2
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-------CC-CeEEEcCCCCcchH-HHHHH-----h
Q 013019 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTR-IFIET-----V 269 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~-------~G-D~VIv~~~~Y~~t~-~~l~~-----~ 269 (451)
.+.++...+|.++|+++.+. +.+.+++||++|+..++..... +| .+||.....|.+.. ..+.. .
T Consensus 90 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~ 169 (456)
T PRK07480 90 KTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYM 169 (456)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhh
Confidence 35678888999999998853 5788889999999998875432 23 46888777776632 11110 0
Q ss_pred hhcCCc---EEEEeCCC---------C--------HHHHHHhhc---CCCeEEEEEeCCCCCcccccc----HHHHHHHH
Q 013019 270 LPKMGI---TATVIDPA---------D--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (451)
Q Consensus 270 l~~~Gi---~v~~vd~~---------D--------~d~Le~ai~---~~~tklV~lesPsNPtG~v~D----L~~IaelA 322 (451)
-...+. .+..++.. + .+.+++.+. .+++.+|++|....-.|.+.+ +++|.++|
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc 249 (456)
T PRK07480 170 HEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRIC 249 (456)
T ss_pred hcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 000111 11222210 1 255655452 135899999987765666554 89999999
Q ss_pred HhcCCEEEEecCCCC----C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHH-HhH-hhC--CCcc
Q 013019 323 HKKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-LHH-VLG--GALN 392 (451)
Q Consensus 323 ~~~g~~lVVD~tfa~----~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~-~~~-~~G--~~ls 392 (451)
++||+++|+||++.. + +...-...-.||++ ++|.++|. -+..|.+++++++.+.+.. ... ..+ ...+
T Consensus 250 ~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG-~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gn 326 (456)
T PRK07480 250 RKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMT--IAKGLTSG-YIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGH 326 (456)
T ss_pred HHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeee--eehhhccC-CccceEEEEcHHHHHHHhcCCCCcccCCCCCcC
Confidence 999999999998532 1 11221222357776 79999863 1235667778888777631 110 111 2346
Q ss_pred HHHHHHHHHhhHHHHH--HHHHH-HHHHHHHHHHH---HcCCCeEEEecCCC
Q 013019 393 PNAAYLIIRGMKTLHL--RVQQQ-NSTALRMAEIL---EAHPKVLLLFITLL 438 (451)
Q Consensus 393 ~~~a~l~lrgL~tl~~--Rl~~~-~~nA~~Lae~L---~~~p~V~~V~yPgL 438 (451)
|..+..++..|+.+.. -+++. .+....|.+.| .++|.|..|+.-|+
T Consensus 327 pl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Gl 378 (456)
T PRK07480 327 PVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGL 378 (456)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecc
Confidence 7776666666665532 12333 23344444444 45776766665443
No 336
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.04 E-value=2.7e-08 Score=106.07 Aligned_cols=215 Identities=16% Similarity=0.165 Sum_probs=135.0
Q ss_pred CchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHHHH-HHh---------hhcCC
Q 013019 208 GNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFI-ETV---------LPKMG 274 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~g-ae~~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l-~~~---------l~~~G 274 (451)
.++...+|.++|.++.. .+...+++||++|+..++..... ..++||.....|.+....+ ... ....|
T Consensus 137 ~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g 216 (474)
T PLN02482 137 PCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPG 216 (474)
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCC
Confidence 56667778888888774 47788889999999998875432 2357888888787743211 110 00111
Q ss_pred c------EEEEeCCCCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCC----
Q 013019 275 I------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP---- 338 (451)
Q Consensus 275 i------~v~~vd~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~---- 338 (451)
+ .+..++..|++++++.++. +++.+|++|......|.+.+ +++|.++|++||+++|+||++...
T Consensus 217 ~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~ 296 (474)
T PLN02482 217 VPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAY 296 (474)
T ss_pred CCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCc
Confidence 1 2233455688999988853 24889999988777776665 678999999999999999996321
Q ss_pred -CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh-HhhCCC--ccHHHHHHHHHhhHHHH--HHHHH
Q 013019 339 -LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGA--LNPNAAYLIIRGMKTLH--LRVQQ 412 (451)
Q Consensus 339 -~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-~~~G~~--ls~~~a~l~lrgL~tl~--~Rl~~ 412 (451)
..+.-+..-.|+++ ++|.++|. .-.|.+++++++++.+.... ...+.+ .+|..+...+..|+.+. ...++
T Consensus 297 ~ga~~~~gv~PDi~t--~gK~lggG--~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~ 372 (474)
T PLN02482 297 GGAQEYFGITPDLTT--LGKVIGGG--LPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEY 372 (474)
T ss_pred chHhHHhCCCCCEEE--ecchhhCC--CceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHH
Confidence 11111222357754 79999864 34566688999888775321 112222 34555555555555443 23455
Q ss_pred HHHHHHHHHHHHHc
Q 013019 413 QNSTALRMAEILEA 426 (451)
Q Consensus 413 ~~~nA~~Lae~L~~ 426 (451)
..+..+.|.+.|++
T Consensus 373 ~~~~g~~l~~~L~~ 386 (474)
T PLN02482 373 LDKITKKLIQGILE 386 (474)
T ss_pred HHHHHHHHHHHHHH
Confidence 55556666665543
No 337
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.03 E-value=5e-08 Score=102.86 Aligned_cols=228 Identities=13% Similarity=0.126 Sum_probs=139.3
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------CC-CeEEEcCCCCcch-HHHHHH------
Q 013019 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKT-RIFIET------ 268 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~-------~G-D~VIv~~~~Y~~t-~~~l~~------ 268 (451)
.+.++...+|.++|.++.. .+.+.+++||++|+..++..... +| .+|+.....|.+. ...+..
T Consensus 83 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~ 162 (429)
T PRK06173 83 GFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTG 162 (429)
T ss_pred ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchh
Confidence 3467778889999998874 36777889999999998875432 23 4688888877662 221110
Q ss_pred hhhcCC---cEEEEeCCC-----------CHHHHHHhhc--CCCeEEEEEeCC-CCCccccc-c---HHHHHHHHHhcCC
Q 013019 269 VLPKMG---ITATVIDPA-----------DMEGLEAALN--NNNVSLFFTESP-TNPFLRCV-D---VKLVSDLCHKKGA 327 (451)
Q Consensus 269 ~l~~~G---i~v~~vd~~-----------D~d~Le~ai~--~~~tklV~lesP-sNPtG~v~-D---L~~IaelA~~~g~ 327 (451)
.-..++ -.+.+++.. +++.|++.+. .+++.+|++|.. ..-.|... + +++|.++|++||+
T Consensus 163 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~ 242 (429)
T PRK06173 163 MHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGV 242 (429)
T ss_pred hhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCC
Confidence 000000 011222211 3566777774 235899999974 55445443 2 7899999999999
Q ss_pred EEEEecCCCCCCc-------cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh---HhhC--CCccHHH
Q 013019 328 IVCIDGTFATPLN-------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLG--GALNPNA 395 (451)
Q Consensus 328 ~lVVD~tfa~~~~-------~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~---~~~G--~~ls~~~ 395 (451)
++|+||++ +++. ..-...-.||++ ++|.++|. -+.++.+++++++.+.+.... ...+ ...+|..
T Consensus 243 llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG-~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~ 318 (429)
T PRK06173 243 LLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKALTGG-YLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLA 318 (429)
T ss_pred eEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhhhCC-ccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHH
Confidence 99999996 3321 111122357887 89999653 234677788888877764210 1122 2346777
Q ss_pred HHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH---cCCCeEEEecCC
Q 013019 396 AYLIIRGMKTLHL--RVQQQNSTALRMAEILE---AHPKVLLLFITL 437 (451)
Q Consensus 396 a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L~---~~p~V~~V~yPg 437 (451)
+..++..|+.+.. .+++..++.+.+.+.|+ ++|.|..|+.-|
T Consensus 319 ~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~G 365 (429)
T PRK06173 319 CAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLG 365 (429)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccc
Confidence 7766666666542 24555666667777665 356565554433
No 338
>PRK06149 hypothetical protein; Provisional
Probab=99.03 E-value=6.1e-08 Score=111.73 Aligned_cols=230 Identities=13% Similarity=0.136 Sum_probs=139.3
Q ss_pred ccCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHH---HccCCCeEEEcCCCCcc-hHHHHHH--hh---hc
Q 013019 204 YGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLA---LVPAGGHIVTTTDCYRK-TRIFIET--VL---PK 272 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~a---ll~~GD~VIv~~~~Y~~-t~~~l~~--~l---~~ 272 (451)
.+|+.++...+|.++|+++.. .+.+++++||++|+..++.. +.. ..+||..+..|.+ +.....- .. ..
T Consensus 618 ~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~ 696 (972)
T PRK06149 618 NSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASG-RRDVVSVLEAYHGWTVATDAVSTSIADNPQ 696 (972)
T ss_pred cccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcC-CCeEEEEeCCCCCcChhHhhhcCCcccccc
Confidence 356677888999999999883 47788899999999999873 322 3457777766665 3221110 00 00
Q ss_pred C--Cc--EEEEeC--------C--CC-----HHHHHHhhc-----CCCeEEEEEeCCCCCcccccc----HHHHHHHHHh
Q 013019 273 M--GI--TATVID--------P--AD-----MEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (451)
Q Consensus 273 ~--Gi--~v~~vd--------~--~D-----~d~Le~ai~-----~~~tklV~lesPsNPtG~v~D----L~~IaelA~~ 324 (451)
. .. .+..++ . .+ .+++++.++ ..++.+|++|......|.+.+ +++|.++|++
T Consensus 697 ~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~ 776 (972)
T PRK06149 697 ALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRA 776 (972)
T ss_pred ccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHH
Confidence 0 00 011111 0 11 233333332 235889999987776777776 9999999999
Q ss_pred cCCEEEEecCCC-CCCccc------cccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhh-CCCccHHHH
Q 013019 325 KGAIVCIDGTFA-TPLNQK------ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL-GGALNPNAA 396 (451)
Q Consensus 325 ~g~~lVVD~tfa-~~~~~~------pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~-G~~ls~~~a 396 (451)
||+++|+||++. .+.... -...-.||++ ++|.+++. ...|++++++++.+.+....... +...+|..+
T Consensus 777 ~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt--~gK~lg~G--~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~ 852 (972)
T PRK06149 777 RGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIIT--MAKGMGNG--HPLGAVITRREIAEALEAEGYFFSSTGGSPVSC 852 (972)
T ss_pred cCCEEEEEeehhcCCccCccchhhhhcCCCCCEEE--ecccccCC--eeeEEEEEcHHHHhhhccCCcccCCCCCCHHHH
Confidence 999999999962 221111 1122358874 79999864 35788899998888775311111 234577777
Q ss_pred HHHHHhhHHHHHH--HHHHHHHHHHHHHHH----HcCCCeEEEecCCC
Q 013019 397 YLIIRGMKTLHLR--VQQQNSTALRMAEIL----EAHPKVLLLFITLL 438 (451)
Q Consensus 397 ~l~lrgL~tl~~R--l~~~~~nA~~Lae~L----~~~p~V~~V~yPgL 438 (451)
..++..|+.+... .++..+....|.+.| .++|.|..|+.-||
T Consensus 853 aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl 900 (972)
T PRK06149 853 RIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGL 900 (972)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecce
Confidence 7766666655421 222323334444444 34777777765544
No 339
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.03 E-value=9e-09 Score=106.50 Aligned_cols=201 Identities=15% Similarity=0.184 Sum_probs=130.8
Q ss_pred HHHHHHHHHhhhCCC--c-E-EEeCCHHHHHHHHHHHHc-cCCCeEEEcCCCCcchHHHHHHhhhcCCc-EEEEeC----
Q 013019 212 TVVVEEKMSALEGAE--S-T-VIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGI-TATVID---- 281 (451)
Q Consensus 212 ~~~Lee~LA~l~gae--~-~-vv~sSG~aAi~~al~all-~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi-~v~~vd---- 281 (451)
..+.++.|.++++.+ . + ++.+||+.++.+++..++ ++||+|++.. .|+. ++..++++.+|+ +++.++
T Consensus 41 ~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~--r~~~eia~~~g~~~v~~l~~~~g 117 (374)
T TIGR01365 41 LAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGK--GWVTDVTKQLKLPDVRVLEAEYG 117 (374)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHH--HHHHHHHHhcCCCCcEEEcCCCC
Confidence 445688888888852 2 3 446789999999999999 5898888754 4443 333356677888 466554
Q ss_pred -CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCC---CCccccccCCCcEEEECCcc
Q 013019 282 -PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT---PLNQKALSLGADLVLHSATK 357 (451)
Q Consensus 282 -~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~---~~~~~pl~~GaDiVv~S~SK 357 (451)
..|+++++. ++ .+-++..| -.||...|+++|.... +++++|||.+-+. ++..+ ++|+++.|..|
T Consensus 118 ~~~~~~~ve~--~~-~v~~vhnE---TSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d----~iDv~~tgsQK 185 (374)
T TIGR01365 118 KLPDLKKVDF--KN-DVVFTWNG---TTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH----KLDVVTFSWQK 185 (374)
T ss_pred CCCCHHHcCC--CC-CEEEecCC---Cchheecccccccccc--CCCcEEEEccchhcCCCCChh----HCcEEEEechh
Confidence 236777762 22 22222222 2468888987665322 5899999998432 23222 48999999999
Q ss_pred cCCccccceeEEEEeCHHHHHHHHHHh------H-------------hh-CC---CccHHHHHHHHHhhH------HHHH
Q 013019 358 FIGGHNDVLAGSISGSGKLVTQIRNLH------H-------------VL-GG---ALNPNAAYLIIRGMK------TLHL 408 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~~eli~~lr~~~------~-------------~~-G~---~ls~~~a~l~lrgL~------tl~~ 408 (451)
.|++++ ..++++.+++.+++++... . .. +. +.+-...+.+++.|+ .++.
T Consensus 186 ~L~~pp--Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~ 263 (374)
T TIGR01365 186 VLGGEG--AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKP 263 (374)
T ss_pred ccCCCC--ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHH
Confidence 999887 4678888888877655311 0 01 11 111222333333342 3778
Q ss_pred HHHHHHHHHHHHHHHHHcCCC
Q 013019 409 RVQQQNSTALRMAEILEAHPK 429 (451)
Q Consensus 409 Rl~~~~~nA~~Lae~L~~~p~ 429 (451)
|.+|+.++++.+.+++++.+.
T Consensus 264 ~~~Rh~~~a~~l~~~l~~lg~ 284 (374)
T TIGR01365 264 LIARADDNLAVLEAFVAKNNW 284 (374)
T ss_pred HHHHHHHHHHHHHHHHHHCCC
Confidence 899999999999999998763
No 340
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.01 E-value=8.7e-08 Score=101.37 Aligned_cols=225 Identities=12% Similarity=0.086 Sum_probs=134.0
Q ss_pred CCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHc-cC-CCeEEEcCCCCcchH-HHHHHhh----hc--C
Q 013019 206 RYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV-PA-GGHIVTTTDCYRKTR-IFIETVL----PK--M 273 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~g---ae~~vv~sSG~aAi~~al~all-~~-GD~VIv~~~~Y~~t~-~~l~~~l----~~--~ 273 (451)
.+.++...+|.++|.++.+ .+.+.+++||++|+..++.... -. .++|+.....|.+.. ..+...- .. +
T Consensus 93 ~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~ 172 (441)
T PRK05769 93 DFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGF 172 (441)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCC
Confidence 4567888899999999875 2567778899999999886432 12 356888777776633 2221100 00 0
Q ss_pred C---cEEEEeCC----------CC--------HHHHHH-hhc----CCCeEEEEEeCCCCCcccccc----HHHHHHHHH
Q 013019 274 G---ITATVIDP----------AD--------MEGLEA-ALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (451)
Q Consensus 274 G---i~v~~vd~----------~D--------~d~Le~-ai~----~~~tklV~lesPsNPtG~v~D----L~~IaelA~ 323 (451)
+ -.+..++. .+ ++.+++ .++ ..++.+|++|......|.+.+ +++|.++|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~ 252 (441)
T PRK05769 173 FPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLAD 252 (441)
T ss_pred CCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHH
Confidence 0 01222221 11 233555 222 235899999988777788777 999999999
Q ss_pred hcCCEEEEecCCCCC-C-----ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHH
Q 013019 324 KKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAY 397 (451)
Q Consensus 324 ~~g~~lVVD~tfa~~-~-----~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~ 397 (451)
+||+++|+||++... . .......-.|+++ ++|.+++. ..+|++++++++++.+.... ......+|..+.
T Consensus 253 ~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt--~~K~l~~G--~p~gav~~~~~i~~~~~~~~-~~T~~g~p~~~a 327 (441)
T PRK05769 253 KYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIIT--LAKAIAGG--LPLGAVIGRAELMFLPPGSH-ANTFGGNPVAAA 327 (441)
T ss_pred HcCCEEEEechhhCCCcccceehhhccCCCCCEEE--EcccccCC--cccEEEEEehhhhhcCCCCC-CCCCCcCHHHHH
Confidence 999999999996521 1 1111122248875 78999853 45788888888764322111 111123566665
Q ss_pred HHHHhhHHHHH-HHHHHHHHHHHHHHHHH----cCCCeEEEec
Q 013019 398 LIIRGMKTLHL-RVQQQNSTALRMAEILE----AHPKVLLLFI 435 (451)
Q Consensus 398 l~lrgL~tl~~-Rl~~~~~nA~~Lae~L~----~~p~V~~V~y 435 (451)
.++..|+.+.. .+++..+..+.|.+.|+ ++|.+..|+.
T Consensus 328 aa~a~L~~l~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg 370 (441)
T PRK05769 328 AALATLEELEEGLLENAQKLGEYLRKELKELKEKYEFIGDVRG 370 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeec
Confidence 55555555432 23444455555555553 3666656543
No 341
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.01 E-value=2.4e-08 Score=105.33 Aligned_cols=214 Identities=13% Similarity=0.171 Sum_probs=135.1
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-CC-CeEEEcCCCCcchHHH-HHH-hh---------h
Q 013019 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-AG-GHIVTTTDCYRKTRIF-IET-VL---------P 271 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~-~G-D~VIv~~~~Y~~t~~~-l~~-~l---------~ 271 (451)
+.++...+|-++|.++.+. +.+.+++||++|+..++..... .| .+|+.....|.+.... +.. .+ .
T Consensus 90 ~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~ 169 (433)
T PRK00615 90 LTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTH 169 (433)
T ss_pred CCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCC
Confidence 4567778888899888754 4677889999999998875432 23 5677777777663211 100 00 0
Q ss_pred cC-----CcEEEEeCCCCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCCC-
Q 013019 272 KM-----GITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL- 339 (451)
Q Consensus 272 ~~-----Gi~v~~vd~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~~- 339 (451)
.. ......++..|++++++.+.+ +++.+|++|......|.+.+ +++|.++|++||+++|+||++. ++
T Consensus 170 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~R 248 (433)
T PRK00615 170 LVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GFR 248 (433)
T ss_pred CCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-ccc
Confidence 00 001122344578888888752 34789999988777777766 5699999999999999999973 22
Q ss_pred c-----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH-hhCC--CccHHHHHHHHHhhHHHHH--H
Q 013019 340 N-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGG--ALNPNAAYLIIRGMKTLHL--R 409 (451)
Q Consensus 340 ~-----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~-~~G~--~ls~~~a~l~lrgL~tl~~--R 409 (451)
. ..-...-.||++ ++|.++|. ..+|++++++++++.+..... ..+. ..+|..+..++..|+.+.. .
T Consensus 249 ~G~~ga~~~~gv~PDi~~--~gK~lggG--~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~ 324 (433)
T PRK00615 249 VAQGGAAAIYHVKPDITV--YGKILGGG--LPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGF 324 (433)
T ss_pred ccHhHHHHhcCCCCCeEE--EcccccCC--cceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccH
Confidence 1 111122357776 79999853 347889999998887753211 1222 2467776666666655532 2
Q ss_pred HHHHHHHHHHHHHHHH
Q 013019 410 VQQQNSTALRMAEILE 425 (451)
Q Consensus 410 l~~~~~nA~~Lae~L~ 425 (451)
+++..++.+.+.+.|+
T Consensus 325 ~~~~~~~g~~l~~~l~ 340 (433)
T PRK00615 325 YTQLSTLEQNFLSPIE 340 (433)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4445555555544443
No 342
>PRK06062 hypothetical protein; Provisional
Probab=99.01 E-value=6.8e-08 Score=102.46 Aligned_cols=232 Identities=14% Similarity=0.097 Sum_probs=140.4
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-C-CCeEEEcCCCCcch-HHHHHHh----hhc--
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-A-GGHIVTTTDCYRKT-RIFIETV----LPK-- 272 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~-~-GD~VIv~~~~Y~~t-~~~l~~~----l~~-- 272 (451)
...+.++...+|.++|+++... +.+.+++||++|+..++..... . ..+||.....|.+. ...+... ...
T Consensus 89 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~ 168 (451)
T PRK06062 89 APAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPND 168 (451)
T ss_pred CCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCC
Confidence 3456788888999999998743 5777889999999998875422 2 35688877777663 2222110 000
Q ss_pred ---CCcEEEEeC---------CCC-------HHHHHHhhcC---CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcC
Q 013019 273 ---MGITATVID---------PAD-------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKG 326 (451)
Q Consensus 273 ---~Gi~v~~vd---------~~D-------~d~Le~ai~~---~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g 326 (451)
.|+.....+ ..| ++.+++.++. +++.+|++|......|.+.+ +++|.++|+++|
T Consensus 169 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g 248 (451)
T PRK06062 169 TGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHG 248 (451)
T ss_pred CCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 111110000 012 5677777742 35889999988777777776 999999999999
Q ss_pred CEEEEecCCCCC----C--ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhC--CCccHHHHHH
Q 013019 327 AIVCIDGTFATP----L--NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG--GALNPNAAYL 398 (451)
Q Consensus 327 ~~lVVD~tfa~~----~--~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G--~~ls~~~a~l 398 (451)
+++|+||++... . ...-...-.||++ ++|.+++. -+..|.+++++++++.+.......+ ...+|..+..
T Consensus 249 ~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t--~gK~lggG-~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aa 325 (451)
T PRK06062 249 IVLIADEVMAGFGRTGKWFAIEHFGVVPDLIT--FAKGVNSG-YVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAA 325 (451)
T ss_pred CEEEeeccccCCCcCcHHHHHHhcCCCCCeee--echhhhcC-CcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHH
Confidence 999999996431 1 1121222357665 79999863 1225667777888877653211111 1235777766
Q ss_pred HHHhhHHHHHH--HHHHHHHH-HHHHHHH----HcCCCeEEEecCCC
Q 013019 399 IIRGMKTLHLR--VQQQNSTA-LRMAEIL----EAHPKVLLLFITLL 438 (451)
Q Consensus 399 ~lrgL~tl~~R--l~~~~~nA-~~Lae~L----~~~p~V~~V~yPgL 438 (451)
++..|+.+... +++..+.. ..+.+.| +++|.|..|+.-|+
T Consensus 326 a~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl 372 (451)
T PRK06062 326 AVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGV 372 (451)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEecccc
Confidence 66666655321 22222222 2233333 44677777776666
No 343
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.00 E-value=4.4e-08 Score=103.00 Aligned_cols=167 Identities=16% Similarity=0.118 Sum_probs=107.0
Q ss_pred CCchhHHHHHHHHHhhhC----CC-cEEEe-CCHHHHHHHHHHHHc--cCCCeEEEcCCCCcc-hHHHHHHh-----hhc
Q 013019 207 YGNPTTVVVEEKMSALEG----AE-STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRK-TRIFIETV-----LPK 272 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~g----ae-~~vv~-sSG~aAi~~al~all--~~GD~VIv~~~~Y~~-t~~~l~~~-----l~~ 272 (451)
+.++...+|.++|+++.. .+ ...++ +||++|+..++.... ....+||.....|.+ +...+... -..
T Consensus 79 ~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~ 158 (425)
T PRK09264 79 MHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQG 158 (425)
T ss_pred cCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccC
Confidence 356777888888888642 23 34454 699999999887543 223568887777766 33222110 011
Q ss_pred CCc---EEEEeCC--------CCHHHHHHhhcC-----CCeEEEEEeCCCCCccccc----cHHHHHHHHHhcCCEEEEe
Q 013019 273 MGI---TATVIDP--------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 273 ~Gi---~v~~vd~--------~D~d~Le~ai~~-----~~tklV~lesPsNPtG~v~----DL~~IaelA~~~g~~lVVD 332 (451)
++. .+..++. .|++++++.+++ +++.+|++|......|.+. .+++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 238 (425)
T PRK09264 159 AGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVD 238 (425)
T ss_pred CCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEe
Confidence 111 2333433 367788888852 2478999998877666543 4899999999999999999
Q ss_pred cCCCCC------CccccccCCCcEEEECCcccCCccccceeEEEEeCHHH
Q 013019 333 GTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL 376 (451)
Q Consensus 333 ~tfa~~------~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~el 376 (451)
|++... +.........|+++ ++|.+++.| ...|++++++++
T Consensus 239 EV~tG~GrtG~~~~~~~~~v~PDi~t--~~K~l~~~G-~pigav~~~~~i 285 (425)
T PRK09264 239 DIQAGCGRTGTFFSFERAGITPDIVT--LSKSISGYG-LPMALVLIKPEL 285 (425)
T ss_pred chhhCCccccHHHHHhhcCCCCCEEE--eccccCCCc-cceEEEEEchhh
Confidence 997421 11121223457664 679998755 457888888775
No 344
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.00 E-value=1.1e-07 Score=101.08 Aligned_cols=225 Identities=14% Similarity=0.099 Sum_probs=133.1
Q ss_pred CchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcc-hHHHHHHh-h---hcCCc---
Q 013019 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRK-TRIFIETV-L---PKMGI--- 275 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~-t~~~l~~~-l---~~~Gi--- 275 (451)
.++...+|.++|+++.+. +.+.+++||++|+..++.... ....+||.....|.+ +...+... . .+.+.
T Consensus 94 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~ 173 (457)
T PRK05639 94 HSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPL 173 (457)
T ss_pred CCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCC
Confidence 356777899999988753 567888999999999887543 223468877777766 32222110 0 00111
Q ss_pred --EEEEeCCC-------------CH--------HHHHHhh-----cCCCeEEEEEeCCCCCcccccc----HHHHHHHHH
Q 013019 276 --TATVIDPA-------------DM--------EGLEAAL-----NNNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (451)
Q Consensus 276 --~v~~vd~~-------------D~--------d~Le~ai-----~~~~tklV~lesPsNPtG~v~D----L~~IaelA~ 323 (451)
.+.+++.. +. +.+++.+ .++++.+|++|......|.+.+ +++|.++|+
T Consensus 174 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~ 253 (457)
T PRK05639 174 MPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLD 253 (457)
T ss_pred CCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 12233221 12 2355443 1335899999977665565443 889999999
Q ss_pred hcCCEEEEecCCCC----CC--ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHH
Q 013019 324 KKGAIVCIDGTFAT----PL--NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAY 397 (451)
Q Consensus 324 ~~g~~lVVD~tfa~----~~--~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~ 397 (451)
+||+++|+||++.. +. ...-...-.||++ ++|.+++. ...|++++++++++... .........+|..+.
T Consensus 254 ~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG--~pi~av~~~~~i~~~~~-~~~~~T~~g~p~~~a 328 (457)
T PRK05639 254 EHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII--FGKGVASG--MGLSGVIGRKELMDLTS-GSALLTPAANPVISA 328 (457)
T ss_pred HcCCEEEEechhhccCcCchHHHHHhcCCCCCEEE--echhhcCC--CcceeEEehHHHHhhcC-CCcccCCCcCHHHHH
Confidence 99999999999542 11 1121223368888 89999863 24688888888877211 111112234676666
Q ss_pred HHHHhhHHHHH--HHHHHHHHHHHHHHHHH----cCCCeEEEecCC
Q 013019 398 LIIRGMKTLHL--RVQQQNSTALRMAEILE----AHPKVLLLFITL 437 (451)
Q Consensus 398 l~lrgL~tl~~--Rl~~~~~nA~~Lae~L~----~~p~V~~V~yPg 437 (451)
.++..|+.+.. .+++..+...+|.+.|+ ++|.+..|+.-|
T Consensus 329 aa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~G 374 (457)
T PRK05639 329 AAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKG 374 (457)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccce
Confidence 65555655532 13444444555555554 467666665443
No 345
>PRK07481 hypothetical protein; Provisional
Probab=99.00 E-value=1.2e-07 Score=100.49 Aligned_cols=229 Identities=13% Similarity=0.097 Sum_probs=134.9
Q ss_pred CCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHcc-------CC-CeEEEcCCCCcch-HHHHHHh----h
Q 013019 207 YGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKT-RIFIETV----L 270 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~g---ae~~vv~sSG~aAi~~al~all~-------~G-D~VIv~~~~Y~~t-~~~l~~~----l 270 (451)
+.+|...+|.++|.++.+ .+.+.+++||++|+..++..... +| .+||.....|.+. ...+... .
T Consensus 83 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 162 (449)
T PRK07481 83 TTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVF 162 (449)
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccc
Confidence 467888889999999873 35677788999999998875432 23 5688888888773 2111100 0
Q ss_pred -hcCC---cEEEEeC--------C--CCHHH--------HHHhhc---CCCeEEEEEeCCCCCcccccc----HHHHHHH
Q 013019 271 -PKMG---ITATVID--------P--ADMEG--------LEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (451)
Q Consensus 271 -~~~G---i~v~~vd--------~--~D~d~--------Le~ai~---~~~tklV~lesPsNPtG~v~D----L~~Iael 321 (451)
..++ -.+..++ . .|+++ +++++. ++++.+|++|....-.|.+.+ +++|.++
T Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~l 242 (449)
T PRK07481 163 RRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREV 242 (449)
T ss_pred ccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHH
Confidence 0000 0111111 0 13333 344442 235899999987665565543 8999999
Q ss_pred HHhcCCEEEEecCCCC----C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh-----HhhCC-
Q 013019 322 CHKKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGG- 389 (451)
Q Consensus 322 A~~~g~~lVVD~tfa~----~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-----~~~G~- 389 (451)
|++||+++|+||++.. + +...-...-.||++ ++|.++|.- +..|.+++++++.+.+.... ...+.
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T 319 (449)
T PRK07481 243 CDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMC--LAKGITSGY-VPLGATMVNARIADAFEANADFGGAIMHGYT 319 (449)
T ss_pred HHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEE--EeecccCCC-cCceEEEEcHHHHHHHhccCccccccccCCC
Confidence 9999999999998532 1 11222223368887 689998631 23677888888887765311 01121
Q ss_pred -CccHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH----cCCCeEEEecCCC
Q 013019 390 -ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILE----AHPKVLLLFITLL 438 (451)
Q Consensus 390 -~ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L~----~~p~V~~V~yPgL 438 (451)
..+|..+..++..|+.+.. -+++..+..+.|.+.|+ ++|.|..|+.-|+
T Consensus 320 ~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 375 (449)
T PRK07481 320 YSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGL 375 (449)
T ss_pred CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecce
Confidence 2356666655555554432 13334444444444443 3677777765543
No 346
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.00 E-value=6.8e-08 Score=101.21 Aligned_cols=167 Identities=13% Similarity=0.118 Sum_probs=108.0
Q ss_pred CCchhHHHHHHHHHhhh--C--CC-cEEEe-CCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchH-HHHHHh-----hhc
Q 013019 207 YGNPTTVVVEEKMSALE--G--AE-STVIM-ASGMSASTVMLLALVP--AGGHIVTTTDCYRKTR-IFIETV-----LPK 272 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~--g--ae-~~vv~-sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~-~~l~~~-----l~~ 272 (451)
+.++...+|.++|+++. + .. ...++ +||++|+..++..... ...+||.....|.+.. ..+... -..
T Consensus 75 ~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~ 154 (412)
T TIGR02407 75 MATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQG 154 (412)
T ss_pred cCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccC
Confidence 34677788888888864 2 22 34454 7999999998875432 2357888777776632 222110 011
Q ss_pred CC---cEEEEeCC--------CCHHHHHHhhcC-----CCeEEEEEeCCCCCccccc-c---HHHHHHHHHhcCCEEEEe
Q 013019 273 MG---ITATVIDP--------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 273 ~G---i~v~~vd~--------~D~d~Le~ai~~-----~~tklV~lesPsNPtG~v~-D---L~~IaelA~~~g~~lVVD 332 (451)
++ ..+..++. .+++.+++.+++ +++.+|++|...+..|.+. + +++|.++|+++|+++|+|
T Consensus 155 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 234 (412)
T TIGR02407 155 AGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVD 234 (412)
T ss_pred CCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 12 12233332 236678887752 2478999999888888743 2 889999999999999999
Q ss_pred cCCCCC------CccccccCCCcEEEECCcccCCccccceeEEEEeCHHH
Q 013019 333 GTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL 376 (451)
Q Consensus 333 ~tfa~~------~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~el 376 (451)
|++... +.........|+++ ++|.+++.| +..|++++++++
T Consensus 235 EV~tG~GRtG~~~a~~~~~v~PDi~~--~~K~lg~~G-~pigav~~~~~~ 281 (412)
T TIGR02407 235 DIQAGCGRTGTFFSFEPAGIEPDIVC--LSKSISGYG-LPLALTLIKPEL 281 (412)
T ss_pred chhhCCCccchhHHhcccCCCCCEEE--echhccCCc-cceeEEEEchhh
Confidence 996421 11222233468775 679998744 567888888765
No 347
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.00 E-value=7.4e-08 Score=101.10 Aligned_cols=224 Identities=16% Similarity=0.133 Sum_probs=135.8
Q ss_pred hhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHc-cC-CCeEEEcCCCCcc-hHHHHHHhh----h-----cCC
Q 013019 210 PTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV-PA-GGHIVTTTDCYRK-TRIFIETVL----P-----KMG 274 (451)
Q Consensus 210 pt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all-~~-GD~VIv~~~~Y~~-t~~~l~~~l----~-----~~G 274 (451)
+...++-++|.++... ..+++.+||++|+..++.... -. +..||.....|.+ |...+.... . .+.
T Consensus 99 e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~ 178 (447)
T COG0160 99 EPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLP 178 (447)
T ss_pred hhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCC
Confidence 6677788888887653 557788999999999986432 12 3457777777655 443332111 1 111
Q ss_pred cEEEEeCCC-----------------CHHHHHHhhcC-----CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCE
Q 013019 275 ITATVIDPA-----------------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (451)
Q Consensus 275 i~v~~vd~~-----------------D~d~Le~ai~~-----~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~ 328 (451)
-.+..++.. ..+.++..+.. .++.+|++|....-.|.+.+ +++|.++|++||++
T Consensus 179 ~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gil 258 (447)
T COG0160 179 PGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGIL 258 (447)
T ss_pred CCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 123333311 12335554432 24889999999988887764 89999999999999
Q ss_pred EEEecCCCC----C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHh
Q 013019 329 VCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (451)
Q Consensus 329 lVVD~tfa~----~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrg 402 (451)
+|+||++.. + +..+....-.||++ ++|.+++ | +..|.+++++++.+ ...........-+|..+...+.-
T Consensus 259 lI~DEVQtG~GRTG~~fa~E~~gv~PDivt--~aK~ig~-G-~Pl~avv~r~ei~~-~~~g~~~~Tf~GNpva~Aaa~Av 333 (447)
T COG0160 259 LIADEVQTGFGRTGKMFAFEHFGVEPDIVT--LAKSLGG-G-LPLSAVVGRAEIMD-WPPGGHGGTFGGNPVACAAALAV 333 (447)
T ss_pred EEEeccccCCCccccchhhhhcCCCCCEEE--ecccccC-C-CceeEEeccHHhcc-cCCcccCCCCCcCHHHHHHHHHH
Confidence 999999642 1 22222222358887 7899997 3 46788899988877 32211111123366666655555
Q ss_pred hHHHHHH--HHHHHHHHHHHHHHH----HcCCCeEEEecCCC
Q 013019 403 MKTLHLR--VQQQNSTALRMAEIL----EAHPKVLLLFITLL 438 (451)
Q Consensus 403 L~tl~~R--l~~~~~nA~~Lae~L----~~~p~V~~V~yPgL 438 (451)
|+.+... +++..+.-++|.+.| +++|.|..|+.-||
T Consensus 334 L~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Gl 375 (447)
T COG0160 334 LDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGL 375 (447)
T ss_pred HHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccce
Confidence 5544431 233333333344433 45787777776555
No 348
>PRK07036 hypothetical protein; Provisional
Probab=98.99 E-value=1.6e-07 Score=99.95 Aligned_cols=229 Identities=14% Similarity=0.154 Sum_probs=136.4
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-------C-CCeEEEcCCCCcchHHHHHHhhh-----
Q 013019 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLP----- 271 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~-------~-GD~VIv~~~~Y~~t~~~l~~~l~----- 271 (451)
+.++...+|.++|.++... +.+.+++||++|+..++..... + ..+|+.....|.+........-.
T Consensus 92 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~ 171 (466)
T PRK07036 92 MTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADR 171 (466)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCccc
Confidence 4677788899999888743 5677778999999998875321 1 25788878777663211111100
Q ss_pred -cCC---cEEEEeCCCC-----------------HHHHHHhhc---CCCeEEEEEeCCCCCcccccc----HHHHHHHHH
Q 013019 272 -KMG---ITATVIDPAD-----------------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (451)
Q Consensus 272 -~~G---i~v~~vd~~D-----------------~d~Le~ai~---~~~tklV~lesPsNPtG~v~D----L~~IaelA~ 323 (451)
.++ ..+.+++..+ .+.+++.+. .+++.+|++|......|.+.+ +++|.++|+
T Consensus 172 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~ 251 (466)
T PRK07036 172 TEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICR 251 (466)
T ss_pred ccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHH
Confidence 000 0122221111 234555553 235899999987766676665 899999999
Q ss_pred hcCCEEEEecCCCCC-C-----c-cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH---h--HhhC--C
Q 013019 324 KKGAIVCIDGTFATP-L-----N-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL---H--HVLG--G 389 (451)
Q Consensus 324 ~~g~~lVVD~tfa~~-~-----~-~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~---~--~~~G--~ 389 (451)
+||+++|+||++... - . +.-+..-.||++ ++|.+++. -+..|.+++++++.+.+... . ...| .
T Consensus 252 ~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt--~gK~l~gG-~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~ 328 (466)
T PRK07036 252 RYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIIT--FAKGLTSG-YQPLGAVIISERLLDVISGPNAKGNVFTHGFTY 328 (466)
T ss_pred HcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEE--EccccccC-ccccEEEEEcHHHHHHHhcccCcCcccccCCCC
Confidence 999999999985321 1 1 111222358876 69999863 12367777888888776531 0 0112 1
Q ss_pred CccHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHH---HcCCCeEEEecCCC
Q 013019 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEIL---EAHPKVLLLFITLL 438 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L---~~~p~V~~V~yPgL 438 (451)
..+|..+..++..|+.+.. .+++..+..++|.+.| .++|.|..|+.-|+
T Consensus 329 ~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl 382 (466)
T PRK07036 329 SGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVRGDHL 382 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeece
Confidence 2467777666666665532 2344444444444444 45677777765543
No 349
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.97 E-value=7.8e-08 Score=102.52 Aligned_cols=229 Identities=13% Similarity=0.135 Sum_probs=134.5
Q ss_pred CCchhHHHHHHHHHhhhCC-------CcEEEeCCHHHHHHHHHHHHcc-------C-CCeEEEcCCCCcchH-HHHHHh-
Q 013019 207 YGNPTTVVVEEKMSALEGA-------ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTR-IFIETV- 269 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga-------e~~vv~sSG~aAi~~al~all~-------~-GD~VIv~~~~Y~~t~-~~l~~~- 269 (451)
+.++...+|.++|.++... +.+.+++||++|+..++..... + ..+||.....|.+.. ..+...
T Consensus 104 ~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~ 183 (472)
T PRK08742 104 FTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGD 183 (472)
T ss_pred cCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccC
Confidence 5677888899999987642 4677789999999998875432 2 257888888877632 111100
Q ss_pred ---hh-cCC---cEEEEeCCC-----------------CHHHHHHhhc--CCCeEEEEEeC-CCCCcccccc----HHHH
Q 013019 270 ---LP-KMG---ITATVIDPA-----------------DMEGLEAALN--NNNVSLFFTES-PTNPFLRCVD----VKLV 318 (451)
Q Consensus 270 ---l~-~~G---i~v~~vd~~-----------------D~d~Le~ai~--~~~tklV~les-PsNPtG~v~D----L~~I 318 (451)
.. .++ ..+.+++.. +++.+++.++ .+++.+|++|. ..+-.|.+.+ +++|
T Consensus 184 ~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~l 263 (472)
T PRK08742 184 IPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRA 263 (472)
T ss_pred CcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHH
Confidence 00 000 011222211 2456677664 23589999996 3544555432 8899
Q ss_pred HHHHHhcCCEEEEecCCCC----C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh---H-hhC
Q 013019 319 SDLCHKKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---H-VLG 388 (451)
Q Consensus 319 aelA~~~g~~lVVD~tfa~----~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~---~-~~G 388 (451)
.++|+++|+++|+||++.. + +..+-...-.||++ +.|.++|. -+..|.+++++++.+.+.... . ..+
T Consensus 264 r~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~--~gKgl~gG-~~Plaav~~~~ei~~~~~~~~~~~~~~h~ 340 (472)
T PRK08742 264 RELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLC--LSKGLTGG-FLPLSAVLATQQLYDAFLDDSRERAFLHS 340 (472)
T ss_pred HHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEE--EcccccCC-CCCcceeeccHHHHHHhhccCccCccCcC
Confidence 9999999999999998432 2 11222223368888 68999764 123677778888877664210 0 112
Q ss_pred C--CccHHHHHHHHHhhHHHHH-----HHHHHHHHHHHHHHHHHcCCCeEEEecCCC
Q 013019 389 G--ALNPNAAYLIIRGMKTLHL-----RVQQQNSTALRMAEILEAHPKVLLLFITLL 438 (451)
Q Consensus 389 ~--~ls~~~a~l~lrgL~tl~~-----Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL 438 (451)
. ..+|..+..++..|+.+.. +.++.-+..+.+.+.+.++|.|..|+.-||
T Consensus 341 ~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl 397 (472)
T PRK08742 341 HSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQIGEHPHVADVRQAGM 397 (472)
T ss_pred CCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccce
Confidence 2 2356666655555554432 222222222233334566787877776554
No 350
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.97 E-value=1.2e-07 Score=99.83 Aligned_cols=228 Identities=13% Similarity=0.082 Sum_probs=133.1
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------CC-CeEEEcCCCCcch-HHHHHHhh-----
Q 013019 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKT-RIFIETVL----- 270 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~-------~G-D~VIv~~~~Y~~t-~~~l~~~l----- 270 (451)
+.++...+|.++|+++.+ .+...+++||++|+..++..... +| .+|+.....|.+. ...+...-
T Consensus 80 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~ 159 (422)
T PRK05630 80 LTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGM 159 (422)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccc
Confidence 456778889999999874 36788889999999988875432 22 4688888887763 22221000
Q ss_pred -hcCC---cEEEEeCCC--------C----HHHHHHhhcCCCeEEEEEeCC-CCCccccc----cHHHHHHHHHhcCCEE
Q 013019 271 -PKMG---ITATVIDPA--------D----MEGLEAALNNNNVSLFFTESP-TNPFLRCV----DVKLVSDLCHKKGAIV 329 (451)
Q Consensus 271 -~~~G---i~v~~vd~~--------D----~d~Le~ai~~~~tklV~lesP-sNPtG~v~----DL~~IaelA~~~g~~l 329 (451)
..++ -.+.+++.. + .+.+++.+.+ ++.+|++|.. ..-.|.+. .+++|.++|++||+++
T Consensus 160 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~ll 238 (422)
T PRK05630 160 HSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILL 238 (422)
T ss_pred cccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 0000 011222111 1 2345555654 4999999963 54445433 3889999999999999
Q ss_pred EEecCCCCC-Cc-----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH------hHhhCCCccHHHHH
Q 013019 330 CIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL------HHVLGGALNPNAAY 397 (451)
Q Consensus 330 VVD~tfa~~-~~-----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~------~~~~G~~ls~~~a~ 397 (451)
|+||++... .. ..-...-.||+ .+.|.++|.- ..+|++++++++.+.+... ........+|..+.
T Consensus 239 I~DEv~tG~GrtG~~~a~~~~gv~PDi~--t~gK~l~gG~-~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~a 315 (422)
T PRK05630 239 IADEIATGFGRTGELFATLAAGVTPDIM--CVGKALTGGF-MSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACA 315 (422)
T ss_pred EEecceeCCCcCchhhHHHhcCCCCCee--eeechhhcCc-cccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHH
Confidence 999996211 11 11112224777 5799996521 2368888888888776421 11111234676666
Q ss_pred HHHHhhHHHHH--HHHHHHHHHHHHHHHH---HcCCCeEEEecCCC
Q 013019 398 LIIRGMKTLHL--RVQQQNSTALRMAEIL---EAHPKVLLLFITLL 438 (451)
Q Consensus 398 l~lrgL~tl~~--Rl~~~~~nA~~Lae~L---~~~p~V~~V~yPgL 438 (451)
.++..|+.+.. ..++..+....+.+.| .++|.|..|+.-|+
T Consensus 316 aa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl 361 (422)
T PRK05630 316 VAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGA 361 (422)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhhcCCCeeeeecccc
Confidence 65555555432 2334444455555444 34666666655443
No 351
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.96 E-value=1.2e-07 Score=101.00 Aligned_cols=230 Identities=14% Similarity=0.171 Sum_probs=135.9
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------C-CCeEEEcCCCCcch-HHHHHHh-h---
Q 013019 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKT-RIFIETV-L--- 270 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~-------~-GD~VIv~~~~Y~~t-~~~l~~~-l--- 270 (451)
.+.++...+|.++|+++.. .+.+.+++||++|+..++..... + ..+||.....|.+. ...+... .
T Consensus 86 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 165 (466)
T PRK07030 86 GFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALF 165 (466)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccc
Confidence 3567888889999998764 35677889999999998875422 2 24688888877663 2222100 0
Q ss_pred -hcCC---cEEEEeCCC-----------------CHHHHHHhhcC--CCeEEEEEeC-CCCCcccccc----HHHHHHHH
Q 013019 271 -PKMG---ITATVIDPA-----------------DMEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLC 322 (451)
Q Consensus 271 -~~~G---i~v~~vd~~-----------------D~d~Le~ai~~--~~tklV~les-PsNPtG~v~D----L~~IaelA 322 (451)
..++ -.+..++.. +++++++.+.. +++.+|++|. ...-.|.+.. +++|.++|
T Consensus 166 ~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc 245 (466)
T PRK07030 166 TETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREAC 245 (466)
T ss_pred cccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHH
Confidence 0000 011122211 24566777742 3589999996 3444454432 88999999
Q ss_pred HhcCCEEEEecCCCC----C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH-----hHhhCC--
Q 013019 323 HKKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGG-- 389 (451)
Q Consensus 323 ~~~g~~lVVD~tfa~----~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~-----~~~~G~-- 389 (451)
+++|+++|+||++.. + +.......-.||++ +.|.++|. -+..|.+++++++.+.+... ....+.
T Consensus 246 ~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG-~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~ 322 (466)
T PRK07030 246 DRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLC--LSKALTGG-YLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSY 322 (466)
T ss_pred HHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEe--eehhccCC-cccceEEEecHHHHHHHhcccccccccccCCCC
Confidence 999999999998432 1 11222233368888 58998864 12467788898888776421 001122
Q ss_pred CccHHHHHHHHHhhHHHHHH--HHHHHHHHHHHHHHH---HcCCCeEEEecCCC
Q 013019 390 ALNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAEIL---EAHPKVLLLFITLL 438 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~R--l~~~~~nA~~Lae~L---~~~p~V~~V~yPgL 438 (451)
..+|..+..++..|+.+... +++..+...++.+.| .++|.|..|+.-||
T Consensus 323 ~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl 376 (466)
T PRK07030 323 TGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLADHPHVAEVRQTGM 376 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEecee
Confidence 23677666666556555321 233333444444443 34677777765544
No 352
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.95 E-value=2e-07 Score=101.80 Aligned_cols=208 Identities=14% Similarity=0.058 Sum_probs=136.1
Q ss_pred HHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccC------------------------------------------
Q 013019 213 VVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPA------------------------------------------ 248 (451)
Q Consensus 213 ~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~~------------------------------------------ 248 (451)
+++-++|+++.|- ....++++|+.|+..++.+....
T Consensus 126 ~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~ 205 (608)
T TIGR03811 126 EEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQI 205 (608)
T ss_pred HHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccch
Confidence 3455667788874 35788999998888776553210
Q ss_pred ----------CC------eEEEcCCCCcchHHHHHHhhhcCCc---EEEEeCC-----CCHHHHHHhhcC----C-CeEE
Q 013019 249 ----------GG------HIVTTTDCYRKTRIFIETVLPKMGI---TATVIDP-----ADMEGLEAALNN----N-NVSL 299 (451)
Q Consensus 249 ----------GD------~VIv~~~~Y~~t~~~l~~~l~~~Gi---~v~~vd~-----~D~d~Le~ai~~----~-~tkl 299 (451)
|. .++++...|.+.. +.+..+|+ .+..++. .|+++|+++|++ . ++-+
T Consensus 206 ~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~----KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~ 281 (608)
T TIGR03811 206 DEIKAHSARSGKDLQKLGKWLVPQTKHYSWL----KAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILG 281 (608)
T ss_pred hhhhhhccccccccccceEEEECCCccHHHH----HHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEE
Confidence 00 4666666666544 34444555 2444432 488999888853 1 2456
Q ss_pred EEEeCCCCCccccccHHHHHHHH---HhcCC--EEEEecCCCCCC---ccc-----------------------------
Q 013019 300 FFTESPTNPFLRCVDVKLVSDLC---HKKGA--IVCIDGTFATPL---NQK----------------------------- 342 (451)
Q Consensus 300 V~lesPsNPtG~v~DL~~IaelA---~~~g~--~lVVD~tfa~~~---~~~----------------------------- 342 (451)
|+....+-.+|.+.||++|+++| +++|+ +++||.+|+... ...
T Consensus 282 VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~ 361 (608)
T TIGR03811 282 VVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYIS 361 (608)
T ss_pred EEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhccccccccccccccccc
Confidence 67677788899999999999999 66887 699999988632 111
Q ss_pred --------cccCCCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhH-----------------hhCCCcc--HH
Q 013019 343 --------ALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHH-----------------VLGGALN--PN 394 (451)
Q Consensus 343 --------pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~-----------------~~G~~ls--~~ 394 (451)
.+ .++|-+...+||++.-+- .+|+++. ++++.+.+..... ..|...+ ..
T Consensus 362 ~~~~~~l~gl-e~ADSItvDpHK~g~~Py--~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~Al 438 (608)
T TIGR03811 362 REVYNAYKAI-SEAESVTIDPHKMGYIPY--SAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAA 438 (608)
T ss_pred HhHHHHHhcC-cCceEEEeCcccccccCC--CeEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccHHHH
Confidence 01 258999999999988664 3565554 4554443321111 1122222 45
Q ss_pred HHHHHHHh----hHHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 395 AAYLIIRG----MKTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 395 ~a~l~lrg----L~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
..|+.++. .+.+...+++..++++++++.|+++
T Consensus 439 klW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 439 SVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66777654 4578888999999999999999884
No 353
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.94 E-value=1.2e-07 Score=100.92 Aligned_cols=229 Identities=15% Similarity=0.136 Sum_probs=136.1
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-------CC-CeEEEcCCCCcchHH-HHHHhh-----
Q 013019 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRI-FIETVL----- 270 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~-------~G-D~VIv~~~~Y~~t~~-~l~~~l----- 270 (451)
+.++...+|.++|+++... +.+.+++||++|+..++..... +| .+||.....|.+... .+...-
T Consensus 96 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~ 175 (460)
T PRK06916 96 LANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFH 175 (460)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccc
Confidence 3577788899999998753 5677889999999998875432 33 578888888877322 121000
Q ss_pred hcCC---cEEEEeCC-----------------CCHHHHHHhhc--CCCeEEEEEeC-CCCCccccc-c---HHHHHHHHH
Q 013019 271 PKMG---ITATVIDP-----------------ADMEGLEAALN--NNNVSLFFTES-PTNPFLRCV-D---VKLVSDLCH 323 (451)
Q Consensus 271 ~~~G---i~v~~vd~-----------------~D~d~Le~ai~--~~~tklV~les-PsNPtG~v~-D---L~~IaelA~ 323 (451)
..++ ..+..++. .+++++++.++ .+++.+|++|. +..-.|.+. + +++|.++|+
T Consensus 176 ~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~ 255 (460)
T PRK06916 176 QVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCT 255 (460)
T ss_pred cccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHH
Confidence 0000 01111111 12456677774 23589999997 455455443 2 889999999
Q ss_pred hcCCEEEEecCCCC----C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH----hH-hhC--CC
Q 013019 324 KKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HH-VLG--GA 390 (451)
Q Consensus 324 ~~g~~lVVD~tfa~----~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~----~~-~~G--~~ 390 (451)
++|+++|+||++.. + +...-...-.||++ +.|.++|. -+..|++++++++.+.+... .. ..+ ..
T Consensus 256 ~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~--~gK~l~gG-~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~ 332 (460)
T PRK06916 256 KYNVLFITDEVATGFGRTGKMFACEHENVTPDIMT--AGKGLTGG-YLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYT 332 (460)
T ss_pred HcCCEEEeechhhCCCcCchhhHHHhcCCCCCeee--eehhhhcC-ccccceeeecHHHHHHhhccccccCccccCCCCC
Confidence 99999999998522 1 11121222358876 79998864 12467788888887765421 00 111 12
Q ss_pred ccHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH---cCCCeEEEecCCC
Q 013019 391 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILE---AHPKVLLLFITLL 438 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L~---~~p~V~~V~yPgL 438 (451)
.+|..+..++..|+.+.. .+++..+....+.+.|+ ++|.|..|+.-||
T Consensus 333 gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl 385 (460)
T PRK06916 333 GNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGL 385 (460)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCc
Confidence 366666655555555432 23444444555555544 4676767765554
No 354
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.94 E-value=1.5e-08 Score=100.71 Aligned_cols=160 Identities=19% Similarity=0.263 Sum_probs=113.2
Q ss_pred HHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHHH-HHHhhhcCCcEEEEeCCCCHHH
Q 013019 213 VVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIF-IETVLPKMGITATVIDPADMEG 287 (451)
Q Consensus 213 ~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~~-l~~~l~~~Gi~v~~vd~~D~d~ 287 (451)
+.|-.+||-+.|+ .+++++.+-+.-++.+|.+.++ +|+.||+++-.-.+|-.+ .+......++..+..-.+.+++
T Consensus 79 ~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~~ 158 (407)
T COG3844 79 ERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPRA 158 (407)
T ss_pred hHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeChHH
Confidence 4577888889997 3455554444555666655543 488888887554444322 3333444443322222235779
Q ss_pred HHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEECCcccCCccccce
Q 013019 288 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVL 366 (451)
Q Consensus 288 Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S~SK~l~G~gdv~ 366 (451)
++++++++ +.+|++...+--||...|+.+|.+++|++|++++-|=++..+. ..+-...|+|+-|.+..||++|.....
T Consensus 159 ~~~~~~dd-~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGap 237 (407)
T COG3844 159 LEEAITDD-VAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAP 237 (407)
T ss_pred HHHhhccc-eEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCCc
Confidence 99999885 9999998888889999999999999999999999999987653 334446799999999999999765556
Q ss_pred eEEEEeC
Q 013019 367 AGSISGS 373 (451)
Q Consensus 367 gG~Iv~~ 373 (451)
+|+.+.+
T Consensus 238 a~l~v~~ 244 (407)
T COG3844 238 AGLFVAP 244 (407)
T ss_pred eeEEecc
Confidence 6665544
No 355
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.92 E-value=2.1e-08 Score=102.79 Aligned_cols=211 Identities=17% Similarity=0.206 Sum_probs=139.6
Q ss_pred hHHHHHHHHHhhhCCCcEEEe-CCHHHHHHHHHH---HH-ccCC----CeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 211 TTVVVEEKMSALEGAESTVIM-ASGMSASTVMLL---AL-VPAG----GHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 211 t~~~Lee~LA~l~gae~~vv~-sSG~aAi~~al~---al-l~~G----D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
...+|+++|.++.|-+.+-+. .+|++.-.+-++ +. ...| +.+|+++..||.... .+...|.+|..++
T Consensus 110 li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA----SAam~G~~VV~V~ 185 (496)
T COG1003 110 LIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA----SAAMAGFKVVVVK 185 (496)
T ss_pred HHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh----hHhhcCceEEEEe
Confidence 456789999999998776665 477754444443 33 2233 479999999998763 3455688888776
Q ss_pred C-----CCHHHHHHhhcCCCeEEEEEeCCCCCcccc-ccHHHHHHHHHhcCCEEEEecCCCC--CCccccccCCCcEEEE
Q 013019 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFAT--PLNQKALSLGADLVLH 353 (451)
Q Consensus 282 ~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v-~DL~~IaelA~~~g~~lVVD~tfa~--~~~~~pl~~GaDiVv~ 353 (451)
. .|+++|++++.++ +.++.+.+|+. .|.. .+|.+|+++.|++|..|..|.+-.- --..+|.++|+|++-.
T Consensus 186 ~~~~G~VDlddLk~k~~~~-~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~Hl 263 (496)
T COG1003 186 CDENGNVDLDDLRAKAEDN-LAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHL 263 (496)
T ss_pred cCCCCCccHHHHHHHhccc-eeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEe
Confidence 4 3899999999874 99999988883 3433 4799999999999999999998322 1245788999999999
Q ss_pred CCcccCCccc---cceeEEEEeCHHHHHHHHH------H---h-------------HhhCCCccHHHH--HHHHHhhHHH
Q 013019 354 SATKFIGGHN---DVLAGSISGSGKLVTQIRN------L---H-------------HVLGGALNPNAA--YLIIRGMKTL 406 (451)
Q Consensus 354 S~SK~l~G~g---dv~gG~Iv~~~eli~~lr~------~---~-------------~~~G~~ls~~~a--~l~lrgL~tl 406 (451)
-+||+|+.+. .-.+|-|..+.++..-+-. . . ..+|...--..+ |....|-+.|
T Consensus 264 NLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL 343 (496)
T COG1003 264 NLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGL 343 (496)
T ss_pred ecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHH
Confidence 9999998332 1224555555554432211 0 0 011111101123 3344444555
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 013019 407 HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 407 ~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
..--+...-||..+++.|+.+
T Consensus 344 ~~ase~AvLNANYia~rL~~~ 364 (496)
T COG1003 344 KQASEVAVLNANYIARRLKGY 364 (496)
T ss_pred HHHHHHHHHhHHHHHHHhhhc
Confidence 555556667888999999863
No 356
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.91 E-value=5e-08 Score=109.81 Aligned_cols=211 Identities=18% Similarity=0.183 Sum_probs=141.3
Q ss_pred HHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc---cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHH
Q 013019 214 VVEEKMSALEGAE--STVIMASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (451)
Q Consensus 214 ~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all---~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~L 288 (451)
+++..+++|.|-+ .+-++..++++-.+++++.. ....+|++++.+|+.+...++..+...|+++.. +++
T Consensus 128 e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------~~~ 201 (954)
T PRK12566 128 NFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------DAV 201 (954)
T ss_pred HHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------cch
Confidence 4688999999975 55566666654444444432 124689999999999999998889999999875 344
Q ss_pred HHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC-CCCCCccccccCCCcEEEECCc-----ccCCcc
Q 013019 289 EAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSAT-----KFIGGH 362 (451)
Q Consensus 289 e~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t-fa~~~~~~pl~~GaDiVv~S~S-----K~l~G~ 362 (451)
++.+++ ++..|++.+|+ -.|.+.|+++|.+++|++|+++++-.- .+-.+...|.++|+||++.+.. =.+||+
T Consensus 202 ~~~~~~-~~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~~~~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP 279 (954)
T PRK12566 202 DNLAAH-AVFGALLQYPD-THGEIRDLRPLIDQLHGQQALACVAADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYGGP 279 (954)
T ss_pred hhcCCC-CEEEEEEECCC-CceEEccHHHHHHHHHHcCCEEEEEeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCCCC
Confidence 455655 48999999997 689999999999999999998653322 2334667889999999998643 345666
Q ss_pred ccceeEEEEeCHHHHHHHHH----------------------------HhHhhCCCcc------HHHHHHHHHhhHHHHH
Q 013019 363 NDVLAGSISGSGKLVTQIRN----------------------------LHHVLGGALN------PNAAYLIIRGMKTLHL 408 (451)
Q Consensus 363 gdv~gG~Iv~~~eli~~lr~----------------------------~~~~~G~~ls------~~~a~l~lrgL~tl~~ 408 (451)
. +|++++++++..++-. .+.....+-+ ....|++..|-+.|..
T Consensus 280 ~---ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ 356 (954)
T PRK12566 280 H---AAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKR 356 (954)
T ss_pred C---eeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHH
Confidence 5 8999988876544311 0000000000 0113444445454544
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEecC
Q 013019 409 RVQQQNSTALRMAEILEAHPKVLLLFIT 436 (451)
Q Consensus 409 Rl~~~~~nA~~Lae~L~~~p~V~~V~yP 436 (451)
--++...++..+++.|.+ ++++.++-|
T Consensus 357 ia~~~~~~a~~l~~~l~~-~g~~~~~~~ 383 (954)
T PRK12566 357 IAQRVHRLTAILAAGLEA-KGIKRLNRH 383 (954)
T ss_pred HHHHHHHHHHHHHHHHHh-cCCccccCC
Confidence 445566788899999988 676655433
No 357
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.90 E-value=3.2e-07 Score=96.63 Aligned_cols=225 Identities=13% Similarity=0.105 Sum_probs=134.1
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-------CC-CeEEEcCCCCcchHHHHHHhhh-----
Q 013019 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLP----- 271 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~-------~G-D~VIv~~~~Y~~t~~~l~~~l~----- 271 (451)
+.++...+|.++|+++.+. +.+.+++||++|+..++..... +| .+||.....|.+..........
T Consensus 85 ~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~ 164 (427)
T TIGR00508 85 FTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSM 164 (427)
T ss_pred cCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccc
Confidence 4567777888889888754 5778888999999988875432 22 5788888888774221111100
Q ss_pred --cCC--c-EEEEeC-----------CCCHHHHHHhhcC--CCeEEEEEeCC-CCCccc----cccHHHHHHHHHhcCCE
Q 013019 272 --KMG--I-TATVID-----------PADMEGLEAALNN--NNVSLFFTESP-TNPFLR----CVDVKLVSDLCHKKGAI 328 (451)
Q Consensus 272 --~~G--i-~v~~vd-----------~~D~d~Le~ai~~--~~tklV~lesP-sNPtG~----v~DL~~IaelA~~~g~~ 328 (451)
.++ . ....++ ..|++++++.+.. .++.+|++|.. .+-.|. ...+++|.++|+++|++
T Consensus 165 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~l 244 (427)
T TIGR00508 165 HSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDIL 244 (427)
T ss_pred cccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 000 0 011111 0145677777742 24889999974 433332 24589999999999999
Q ss_pred EEEecCCCC-CC-----ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH---hhC--CCccHHHHH
Q 013019 329 VCIDGTFAT-PL-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---VLG--GALNPNAAY 397 (451)
Q Consensus 329 lVVD~tfa~-~~-----~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~---~~G--~~ls~~~a~ 397 (451)
+|+||++.. +. ...-.....||++ ++|.++|. -..++.+++++++.+.++.... ..+ ...+|..+.
T Consensus 245 lI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~gG-~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~a 321 (427)
T TIGR00508 245 LIADEIATGFGRTGKLFACEHAGVVPDILC--VGKALTGG-YMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACA 321 (427)
T ss_pred EEEeccccCCCcCCccchhhhcCCCCCEEE--echhhhcC-cccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHH
Confidence 999999622 11 1111233467776 79999653 2346778888888887764210 111 123566666
Q ss_pred HHHHhhHHHHH--HHHHHHHHHHHHHHHHHc---CCCeEEEe
Q 013019 398 LIIRGMKTLHL--RVQQQNSTALRMAEILEA---HPKVLLLF 434 (451)
Q Consensus 398 l~lrgL~tl~~--Rl~~~~~nA~~Lae~L~~---~p~V~~V~ 434 (451)
.++..|+.+.. ..++..++..+|.+.|++ ++.+..|+
T Consensus 322 aa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vr 363 (427)
T TIGR00508 322 VAEASLAILLEGEWQKQVSAIENQLKRELSPLRKNPVVKDVR 363 (427)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCCCEEeEe
Confidence 65555554432 245555666667666654 34444443
No 358
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.90 E-value=7.1e-09 Score=104.91 Aligned_cols=180 Identities=17% Similarity=0.162 Sum_probs=132.5
Q ss_pred HHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHh
Q 013019 212 TVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAA 291 (451)
Q Consensus 212 ~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~a 291 (451)
+-.||+.||++.|.+++++++-|-+++..++.++.+.||.|++.+.+..+.. ..++...-.+.++..+|.++++..
T Consensus 141 HldlE~~iakF~G~E~aivYs~gF~ti~S~ipafsKrGDIi~~de~~nfaIq----~GlqlSRS~i~~Fkhndm~~lerl 216 (467)
T KOG1358|consen 141 HLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQ----KGLQLSRSTISYFKHNDMEDLERL 216 (467)
T ss_pred ecccHHHHHHhhCCcceeeeccccchhhhcchhhhccCcEEEEehhhhHHHH----HHHhhhhheeEEecCCCHHHHHHh
Confidence 5579999999999999999999999999999999999999999876655433 334444556777788888888877
Q ss_pred hcCCC------------eEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccc---------c-CCCc
Q 013019 292 LNNNN------------VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKAL---------S-LGAD 349 (451)
Q Consensus 292 i~~~~------------tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl---------~-~GaD 349 (451)
+.+.. -+.|++|...-++|.+.++.+|.++..++...+++|+++..+...+-. . -..|
T Consensus 217 l~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iD 296 (467)
T KOG1358|consen 217 LPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDID 296 (467)
T ss_pred ccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCcccee
Confidence 64421 357888988888999999999999999999999999998665433210 0 1268
Q ss_pred EEEECCcccCCccccceeEEEEeCHHHH--HHHHHHhHhhCCCccHHHHHHH
Q 013019 350 LVLHSATKFIGGHNDVLAGSISGSGKLV--TQIRNLHHVLGGALNPNAAYLI 399 (451)
Q Consensus 350 iVv~S~SK~l~G~gdv~gG~Iv~~~eli--~~lr~~~~~~G~~ls~~~a~l~ 399 (451)
+++.|+.-.++.. ||+.+|+.-++ +++-.....+...+.|..+-.+
T Consensus 297 iv~~sm~~alas~----GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa 344 (467)
T KOG1358|consen 297 IVTASMETALASG----GGFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAA 344 (467)
T ss_pred eeeeccccccccc----CceeecceeeEeeeeccccceeeeccCchhhhhhH
Confidence 9999999988865 58888754222 3333332333344555544333
No 359
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.88 E-value=2e-07 Score=99.20 Aligned_cols=228 Identities=13% Similarity=0.058 Sum_probs=131.4
Q ss_pred CCCchhHHHHHHHHHhhhCCC-----cEEEe-CCHHHHHHHHHHHHcc-CC-CeEEEcCCCCcch-HHHHHHh----h-h
Q 013019 206 RYGNPTTVVVEEKMSALEGAE-----STVIM-ASGMSASTVMLLALVP-AG-GHIVTTTDCYRKT-RIFIETV----L-P 271 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~gae-----~~vv~-sSG~aAi~~al~all~-~G-D~VIv~~~~Y~~t-~~~l~~~----l-~ 271 (451)
.+.+|...+|.++|.++...+ ..+++ +||++|+..++..... +| .+||.....|.+. ...+... . .
T Consensus 102 ~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~ 181 (464)
T PRK06938 102 DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKK 181 (464)
T ss_pred ccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccc
Confidence 356788888888888876422 34455 5999999998875431 23 5688877777663 2222100 0 0
Q ss_pred cCC---cEEEEeCCC-----------------CHHHHHHhhcC-----CCeEEEEEeCCCCCcccccc----HHHHHHHH
Q 013019 272 KMG---ITATVIDPA-----------------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (451)
Q Consensus 272 ~~G---i~v~~vd~~-----------------D~d~Le~ai~~-----~~tklV~lesPsNPtG~v~D----L~~IaelA 322 (451)
.++ -.+.+++.. +++.+++.+++ .++.+|++|....-.|.+.+ +++|.++|
T Consensus 182 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc 261 (464)
T PRK06938 182 PLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRIT 261 (464)
T ss_pred cCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHH
Confidence 000 112223211 25667777753 14899999976654455443 88999999
Q ss_pred HhcCCEEEEecCCCC----C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHH
Q 013019 323 HKKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAA 396 (451)
Q Consensus 323 ~~~g~~lVVD~tfa~----~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a 396 (451)
++||+++|+||++.. + +...-...-.||++ ++|.++|. ...|.+++++++ +.+...........+|..+
T Consensus 262 ~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gKglggG--~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~ 336 (464)
T PRK06938 262 EEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVV--LSKAIGGS--LPLAVVVYREWL-DTWQPGAHAGTFRGNQMAM 336 (464)
T ss_pred HHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEE--eeccccCC--CceEEEeehhHh-hccCCCCCCCCCCcCHHHH
Confidence 999999999998532 1 11222223368888 68999863 456777777663 4332111111112356666
Q ss_pred HHHHHhhHHHHHH--HHHHHHHHHHHHHHH----HcCCCeEEEecCCC
Q 013019 397 YLIIRGMKTLHLR--VQQQNSTALRMAEIL----EAHPKVLLLFITLL 438 (451)
Q Consensus 397 ~l~lrgL~tl~~R--l~~~~~nA~~Lae~L----~~~p~V~~V~yPgL 438 (451)
..++..|+.+... +++..+...+|.+.| +++|.|..|+.-||
T Consensus 337 Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl 384 (464)
T PRK06938 337 AAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGL 384 (464)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccce
Confidence 6666555554321 233333333444433 34787777776654
No 360
>PRK07483 hypothetical protein; Provisional
Probab=98.88 E-value=2.2e-07 Score=98.42 Aligned_cols=229 Identities=15% Similarity=0.183 Sum_probs=135.0
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------CC-CeEEEcCCCCcch-HHHHHHh-----h
Q 013019 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKT-RIFIETV-----L 270 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~-------~G-D~VIv~~~~Y~~t-~~~l~~~-----l 270 (451)
+.++....|.++|+++.. .+.+.+++||++|+..++..... +| .+||.....|.+. ...+... -
T Consensus 70 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~ 149 (443)
T PRK07483 70 FTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRR 149 (443)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccc
Confidence 567888899999999864 36778889999999998875432 23 4688877777663 2222100 0
Q ss_pred hcCC---cEEEEeCC----CC--------------HHHHHHhhc---CCCeEEEEEeCCCC-Ccccccc----HHHHHHH
Q 013019 271 PKMG---ITATVIDP----AD--------------MEGLEAALN---NNNVSLFFTESPTN-PFLRCVD----VKLVSDL 321 (451)
Q Consensus 271 ~~~G---i~v~~vd~----~D--------------~d~Le~ai~---~~~tklV~lesPsN-PtG~v~D----L~~Iael 321 (451)
..++ ..+..++. .+ ++++++++. .+++.+|++|.... -.|.+.+ +++|.++
T Consensus 150 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~l 229 (443)
T PRK07483 150 EPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREV 229 (443)
T ss_pred cccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHH
Confidence 0011 11122221 11 256666553 23589999997653 2343432 8999999
Q ss_pred HHhcCCEEEEecCCCCC------CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH--hhCC--Cc
Q 013019 322 CHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGG--AL 391 (451)
Q Consensus 322 A~~~g~~lVVD~tfa~~------~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--~~G~--~l 391 (451)
|++||+++|+||++... +..+-...-.||++ +.|.++|. -...|.+++++++.+.+..... ..+. .-
T Consensus 230 c~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG-~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~g 306 (443)
T PRK07483 230 CDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVT--IAKGLGAG-YQPIGAVLASDRIYDAIADGSGFFQHGHTYLG 306 (443)
T ss_pred HHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeee--ehhhhccC-ccccEEEEEcHHHHHHHhcCCCccccCCCCCC
Confidence 99999999999985321 11121223358887 68999864 1236777888888777653210 1121 23
Q ss_pred cHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHH----HcCCCeEEEecCCC
Q 013019 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEIL----EAHPKVLLLFITLL 438 (451)
Q Consensus 392 s~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L----~~~p~V~~V~yPgL 438 (451)
+|..+..++..|+.+.. -+++..+....|.+.| +++|.|..|+.-||
T Consensus 307 npl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Gl 359 (443)
T PRK07483 307 HATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGL 359 (443)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeeccc
Confidence 56666655555554432 1333334444444444 45777777776654
No 361
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.87 E-value=2.6e-07 Score=96.68 Aligned_cols=230 Identities=16% Similarity=0.155 Sum_probs=140.5
Q ss_pred cCCCchhHHHHHHHHHhhhC-C--CcEEEeCCHHHHHHHHHHHHc----c---CC-CeEEEcCCCCcc-hHHH-------
Q 013019 205 GRYGNPTTVVVEEKMSALEG-A--ESTVIMASGMSASTVMLLALV----P---AG-GHIVTTTDCYRK-TRIF------- 265 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~g-a--e~~vv~sSG~aAi~~al~all----~---~G-D~VIv~~~~Y~~-t~~~------- 265 (451)
+-.+.| ..+|.++|+++.. . +.+.+..||++|+.+++...+ . +. .++|.-...|.+ |...
T Consensus 83 ~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~ 161 (449)
T COG0161 83 GFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPV 161 (449)
T ss_pred ccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCch
Confidence 334567 8889999999987 3 567777899999999886532 1 22 248887777765 2111
Q ss_pred --HHHhhhcCCcEEEEeCC-----------C------CHHHHHHhhcC---CCeEEEEEeCCCCC-cccccc----HHHH
Q 013019 266 --IETVLPKMGITATVIDP-----------A------DMEGLEAALNN---NNVSLFFTESPTNP-FLRCVD----VKLV 318 (451)
Q Consensus 266 --l~~~l~~~Gi~v~~vd~-----------~------D~d~Le~ai~~---~~tklV~lesPsNP-tG~v~D----L~~I 318 (451)
........-..+.+++. . ..++|++.|.+ +++.++++|....- .|.+.+ ++++
T Consensus 162 ~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~v 241 (449)
T COG0161 162 ALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRV 241 (449)
T ss_pred hhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHH
Confidence 11111111011111211 1 14567776654 45889999977665 454443 8999
Q ss_pred HHHHHhcCCEEEEecCCCC----C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH-h----Hhh
Q 013019 319 SDLCHKKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-H----HVL 387 (451)
Q Consensus 319 aelA~~~g~~lVVD~tfa~----~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~-~----~~~ 387 (451)
.++|++||+++|.||+... + +..+-...-.||++ ++|.+.+.- +..|.++.++++.+.+..- . ...
T Consensus 242 r~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~--~aKGLT~GY-~Pl~a~l~~~~I~~~~~~~~~~~f~HG~ 318 (449)
T COG0161 242 REICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILC--LAKGLTGGY-LPLSAVLTSDRIYEAFSDGDAGAFMHGH 318 (449)
T ss_pred HHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeee--ecccccccc-hhhHhHhhhHHHHHHHhcccCCeeccCC
Confidence 9999999999999998321 1 11121112248877 789888654 3455566677777776643 1 112
Q ss_pred CCCccHHHHHHHHHhhHHHHHH--HHHHHHHHHHHHHHHH----cCCCeEEEecCCC
Q 013019 388 GGALNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAEILE----AHPKVLLLFITLL 438 (451)
Q Consensus 388 G~~ls~~~a~l~lrgL~tl~~R--l~~~~~nA~~Lae~L~----~~p~V~~V~yPgL 438 (451)
.-.-+|..|..++..|+-+... +++..+....+.+.|+ +||.|..|+--|+
T Consensus 319 TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gl 375 (449)
T COG0161 319 TYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGL 375 (449)
T ss_pred ccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccce
Confidence 2345788888888777766532 4455555555555554 4578877776554
No 362
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.86 E-value=1.1e-07 Score=100.30 Aligned_cols=217 Identities=17% Similarity=0.195 Sum_probs=124.4
Q ss_pred HHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHHcc-CCC-eEEEc-CCCCcchHHHHHHh-hhcCCc------EEEEe
Q 013019 212 TVVVEEKMSALEG-AESTVIMASGMSASTVMLLALVP-AGG-HIVTT-TDCYRKTRIFIETV-LPKMGI------TATVI 280 (451)
Q Consensus 212 ~~~Lee~LA~l~g-ae~~vv~sSG~aAi~~al~all~-~GD-~VIv~-~~~Y~~t~~~l~~~-l~~~Gi------~v~~v 280 (451)
..+|.++|.++.. .+.+.+++||++|+..++..... .|. +|+.. ...|.+....+... ....++ .+..+
T Consensus 90 ~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~ 169 (431)
T PRK06209 90 ELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF 169 (431)
T ss_pred HHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccccc
Confidence 3467888888774 46778889999999998874321 343 45543 23332211111000 000111 12234
Q ss_pred CCCCHHHHHHhhcC--CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc------cccccCCCcEEE
Q 013019 281 DPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLGADLVL 352 (451)
Q Consensus 281 d~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~------~~pl~~GaDiVv 352 (451)
+..|+++|+++++. +++.+|++|......+....+++|.++|++||+++|+||++ +++. +..+..-.|+++
T Consensus 170 ~~~d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi~t 248 (431)
T PRK06209 170 RYNDIASLEALFEDHPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDLSC 248 (431)
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCcceee
Confidence 45688999988852 24789999876544333334899999999999999999986 3221 111122346644
Q ss_pred ECCcccCCccccceeEEEEeCHHHHHH--HHHH--hH--hhCCC--ccHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHH
Q 013019 353 HSATKFIGGHNDVLAGSISGSGKLVTQ--IRNL--HH--VLGGA--LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAE 422 (451)
Q Consensus 353 ~S~SK~l~G~gdv~gG~Iv~~~eli~~--lr~~--~~--~~G~~--ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae 422 (451)
++|.+++. ..+|++++++++++. +... .. ..+.+ .+|..+..++..|+.+.. .+++..++...+.+
T Consensus 249 --~gK~lggG--~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~ 324 (431)
T PRK06209 249 --FGKALGNG--FAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAA 324 (431)
T ss_pred --ehhhhcCC--cccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 79999873 357888898888775 2111 11 12323 345666555555555432 24444455555555
Q ss_pred HHH----cCCCeEEE
Q 013019 423 ILE----AHPKVLLL 433 (451)
Q Consensus 423 ~L~----~~p~V~~V 433 (451)
.|+ +++.+..|
T Consensus 325 ~L~~~~~~~~~~~~v 339 (431)
T PRK06209 325 GVNEAAAEHGLQDHV 339 (431)
T ss_pred HHHHHHHhCCCCeEE
Confidence 554 35544333
No 363
>PRK06917 hypothetical protein; Provisional
Probab=98.84 E-value=6.6e-07 Score=94.84 Aligned_cols=230 Identities=13% Similarity=0.134 Sum_probs=134.8
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-------CC-CeEEEcCCCCcchH-HHHHHhh----
Q 013019 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTR-IFIETVL---- 270 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~-------~G-D~VIv~~~~Y~~t~-~~l~~~l---- 270 (451)
.+.++...+|.++|+++... +...+++||++|+..++..... +| .+|+.....|.+.. ..+...-
T Consensus 70 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~ 149 (447)
T PRK06917 70 QFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLR 149 (447)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccc
Confidence 45678888899999998753 4567779999999999875521 23 57888887776632 2221100
Q ss_pred -hcCC---cEEEEeC-----------------CCCHHHHHHhhcC---CCeEEEEEeCCCCCc-cccc-c---HHHHHHH
Q 013019 271 -PKMG---ITATVID-----------------PADMEGLEAALNN---NNVSLFFTESPTNPF-LRCV-D---VKLVSDL 321 (451)
Q Consensus 271 -~~~G---i~v~~vd-----------------~~D~d~Le~ai~~---~~tklV~lesPsNPt-G~v~-D---L~~Iael 321 (451)
..++ -.+..++ ..+++.+++.++. +++.+|++|....-. |.+. + +++|.++
T Consensus 150 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~l 229 (447)
T PRK06917 150 RQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEI 229 (447)
T ss_pred cccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHH
Confidence 0000 0011111 0124566777652 248999999655322 3333 2 7899999
Q ss_pred HHhcCCEEEEecCCCC----C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh-H-hhC--CCc
Q 013019 322 CHKKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-H-VLG--GAL 391 (451)
Q Consensus 322 A~~~g~~lVVD~tfa~----~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-~-~~G--~~l 391 (451)
|+++|+++|+||++.. + +.+.-...-.|+++ ++|.+++. -...|++++++++++.+.... . ..+ ...
T Consensus 230 c~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~--~gK~l~~G-~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~g 306 (447)
T PRK06917 230 CDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMT--LGKGLGAG-YTPIAATVVSDRVMEPILRGSRSIMSGHTLSA 306 (447)
T ss_pred HHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEE--eeehhccC-CcceEEEEEcHHHHHHHhccCcccccccCCCC
Confidence 9999999999998532 1 11121222358766 69999863 123677888888887765321 1 112 124
Q ss_pred cHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH----cCCCeEEEecCCC
Q 013019 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILE----AHPKVLLLFITLL 438 (451)
Q Consensus 392 s~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L~----~~p~V~~V~yPgL 438 (451)
+|..+..++..|+.+.. .+++..+..++|.+.|+ ++|.|..|+.-|+
T Consensus 307 npl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 359 (447)
T PRK06917 307 NPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGL 359 (447)
T ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecce
Confidence 66666666555555532 23444444444444443 4677777665443
No 364
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.84 E-value=2.5e-07 Score=92.17 Aligned_cols=214 Identities=18% Similarity=0.175 Sum_probs=136.8
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc--------CCC--eEEEcCCCCcc-hHHH---------HHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--------AGG--HIVTTTDCYRK-TRIF---------IET 268 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~--------~GD--~VIv~~~~Y~~-t~~~---------l~~ 268 (451)
|....++++.+.+++|.+..+-+++|.+|..+++....+ |.| .|+.....|.+ |... .+.
T Consensus 100 nd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~ 179 (427)
T KOG1402|consen 100 NDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDG 179 (427)
T ss_pred hhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhc
Confidence 345567899999999999999999999999998764432 223 34444455543 2211 111
Q ss_pred hhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCC----C--
Q 013019 269 VLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----P-- 338 (451)
Q Consensus 269 ~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~----~-- 338 (451)
+-....-.+..++..|.++|+.+++..+++.+++|-....-|.+.+ ++++.++|++|++++|.||.+.. +
T Consensus 180 fgp~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~ 259 (427)
T KOG1402|consen 180 FGPFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKL 259 (427)
T ss_pred cCCCCCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcE
Confidence 1111112255677789999999998878999999988888888765 89999999999999999998632 1
Q ss_pred CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 013019 339 LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTAL 418 (451)
Q Consensus 339 ~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~ 418 (451)
+..+--..-.|+|+ +.|.++|.- .....+..+++++-.++...+...-.-+|+.+..++..|+-+.+ ++..+++.
T Consensus 260 la~d~env~PDivi--lgKalSGG~-~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~e--ekL~era~ 334 (427)
T KOG1402|consen 260 LACDYENVRPDIVI--LGKALSGGV-YPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVE--EKLVERAA 334 (427)
T ss_pred EEeehhhcCCCeEE--EeccccCCe-eeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHHHHHH--HHHHHHHH
Confidence 11111122458888 789998764 22344456666665555433222222356666666666665543 33444444
Q ss_pred HH----HHHHHcC
Q 013019 419 RM----AEILEAH 427 (451)
Q Consensus 419 ~L----ae~L~~~ 427 (451)
.| ...|.+.
T Consensus 335 ~lG~~l~~~L~~l 347 (427)
T KOG1402|consen 335 KLGEILRDQLNKL 347 (427)
T ss_pred HHHHHHHHHHHhc
Confidence 44 4445444
No 365
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.83 E-value=4.7e-07 Score=92.02 Aligned_cols=211 Identities=17% Similarity=0.147 Sum_probs=128.6
Q ss_pred HHHHHHHHHhh-hCCC---------cEEEeCCHHHHHHHHHHH--HccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEE
Q 013019 212 TVVVEEKMSAL-EGAE---------STVIMASGMSASTVMLLA--LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (451)
Q Consensus 212 ~~~Lee~LA~l-~gae---------~~vv~sSG~aAi~~al~a--ll~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~ 279 (451)
...+.+.++++ +|.+ ..+-+.+|+.|+..+..- ...+...|.+++|.|+....+ +...|.++..
T Consensus 71 ~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~I----f~~aGl~v~~ 146 (396)
T COG1448 71 LPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAI----FEAAGLEVET 146 (396)
T ss_pred cHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHH----HHhcCCceee
Confidence 44555666554 4532 234467888888776543 344556799999999986644 4556777755
Q ss_pred eC---C----CCHHHHHHhhcCC-CeEEEEE-eCCCCCcccccc---HHHHHHHHHhcCCEEEEecCC---CCCCccccc
Q 013019 280 ID---P----ADMEGLEAALNNN-NVSLFFT-ESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTF---ATPLNQKAL 344 (451)
Q Consensus 280 vd---~----~D~d~Le~ai~~~-~tklV~l-esPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tf---a~~~~~~pl 344 (451)
++ . .|.+.+.+.++.- ...+|++ ..-+||||.-.+ +++|.++.++.|.+-++|-+| +.++..+..
T Consensus 147 Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~ 226 (396)
T COG1448 147 YPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAY 226 (396)
T ss_pred eeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHH
Confidence 43 2 3566665555421 1234444 456799998764 678888999999999999995 444433321
Q ss_pred ------cCCC-cEEEECCcccCCccccceeEEEEe--CHHHHHHH----HHHhHhhCCCccHHHHHHHH----------H
Q 013019 345 ------SLGA-DLVLHSATKFIGGHNDVLAGSISG--SGKLVTQI----RNLHHVLGGALNPNAAYLII----------R 401 (451)
Q Consensus 345 ------~~Ga-DiVv~S~SK~l~G~gdv~gG~Iv~--~~eli~~l----r~~~~~~G~~ls~~~a~l~l----------r 401 (451)
..+. -+|+.|+||.|+..+.+.|++.+. +++..+++ +...+..-.+++...+.++. .
T Consensus 227 ~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~ 306 (396)
T COG1448 227 ALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAE 306 (396)
T ss_pred HHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHH
Confidence 1122 488899999999988777766543 44444443 33333333334344333221 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHc
Q 013019 402 GMKTLHLRVQQQNSTALRMAEILEA 426 (451)
Q Consensus 402 gL~tl~~Rl~~~~~nA~~Lae~L~~ 426 (451)
-.+.+...++++.+.+..+.+.|++
T Consensus 307 W~~El~~Mr~Ri~~mR~~lv~~L~~ 331 (396)
T COG1448 307 WEQELEEMRQRILEMRQALVDALKA 331 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2233444456666777888888877
No 366
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.80 E-value=7.2e-07 Score=94.88 Aligned_cols=227 Identities=12% Similarity=0.065 Sum_probs=129.3
Q ss_pred CCchhHHHHHHHHHhhhCCC----cEEEe-CCHHHHHHHHHHHHc--cCCCeEEEcCCCCcchHHHHHHhh---------
Q 013019 207 YGNPTTVVVEEKMSALEGAE----STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL--------- 270 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae----~~vv~-sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t~~~l~~~l--------- 270 (451)
+.++...+|.++|.++.+.. ..+++ +||++|+..++.... ...++||.....|.+.....-.+-
T Consensus 98 ~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~ 177 (459)
T PRK06931 98 LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAV 177 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCC
Confidence 56788888999999887532 24455 799999999887532 234568888887777432211110
Q ss_pred hcCCcEEEEeCCC-------------CHHHH----HHhhc-----CCCeEEEEEeCCCCCcccccc----HHHHHHHHHh
Q 013019 271 PKMGITATVIDPA-------------DMEGL----EAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (451)
Q Consensus 271 ~~~Gi~v~~vd~~-------------D~d~L----e~ai~-----~~~tklV~lesPsNPtG~v~D----L~~IaelA~~ 324 (451)
......+.+++.. +.+.+ ++.++ ..++.+|++|....-.|.+.+ +++|.++|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~ 257 (459)
T PRK06931 178 NGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQK 257 (459)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHH
Confidence 0001112233221 12222 33332 124889999977655565443 8999999999
Q ss_pred cCCEEEEecCCCC----C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHH
Q 013019 325 KGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL 398 (451)
Q Consensus 325 ~g~~lVVD~tfa~----~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l 398 (451)
||+++|+||++.. + +...-...-.||++ +.|.++|. ...|++++++++ +.+...........+|..+..
T Consensus 258 ~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt--~gK~l~gG--~Pi~av~~~~~~-~~~~~~~~~~T~~gnpla~aa 332 (459)
T PRK06931 258 HGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIV--MSKAVGGG--LPLAVLGIKKEF-DAWQPGGHTGTFRGNQLAMAT 332 (459)
T ss_pred cCCEEEEecchhcCCcCchHHHhhhcCCCCCEEE--ecccccCC--cceeeeeeHHHH-hhccCCCCCCCCCCCHHHHHH
Confidence 9999999998532 1 11222223368887 68999874 345667776653 443211111111246776666
Q ss_pred HHHhhHHHHHH--HHHHHHHHHHHHHHH----HcCCCeEEEecCCC
Q 013019 399 IIRGMKTLHLR--VQQQNSTALRMAEIL----EAHPKVLLLFITLL 438 (451)
Q Consensus 399 ~lrgL~tl~~R--l~~~~~nA~~Lae~L----~~~p~V~~V~yPgL 438 (451)
++..|+.+... +++..+...+|.+.| +++|.|..|+.-||
T Consensus 333 ala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl 378 (459)
T PRK06931 333 GLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGL 378 (459)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCce
Confidence 66666554321 233333333333333 45787888876665
No 367
>PRK06148 hypothetical protein; Provisional
Probab=98.79 E-value=9.2e-07 Score=102.36 Aligned_cols=230 Identities=15% Similarity=0.107 Sum_probs=137.2
Q ss_pred cCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-C-CCeEEEcCCCCcch-HHHHHH----hhhcCC-
Q 013019 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-A-GGHIVTTTDCYRKT-RIFIET----VLPKMG- 274 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~-~-GD~VIv~~~~Y~~t-~~~l~~----~l~~~G- 274 (451)
+++.+|...+|.++|+++... +.+.+++||++|+..++..... . ..+||+.+..|.+. ...+.. .-...+
T Consensus 658 ~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~ 737 (1013)
T PRK06148 658 TRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGK 737 (1013)
T ss_pred CCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCC
Confidence 467888889999999998753 5677889999999998875432 2 35688877777663 211110 000011
Q ss_pred ---cEEEEe--------CCC--C-------HHHHHHhhc-----CCCeEEEEEeCCCCCcccccc----HHHHHHHHHhc
Q 013019 275 ---ITATVI--------DPA--D-------MEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (451)
Q Consensus 275 ---i~v~~v--------d~~--D-------~d~Le~ai~-----~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~ 325 (451)
-.+..+ +.. + .+.+++.++ .+++.+|++|....-.|.+.. +++|.++|+++
T Consensus 738 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~ 817 (1013)
T PRK06148 738 GRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA 817 (1013)
T ss_pred CCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh
Confidence 011111 111 1 134555443 135899999987765666554 89999999999
Q ss_pred CCEEEEecCCCC----C---CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhh-CCCccHHHHH
Q 013019 326 GAIVCIDGTFAT----P---LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL-GGALNPNAAY 397 (451)
Q Consensus 326 g~~lVVD~tfa~----~---~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~-G~~ls~~~a~ 397 (451)
|+++|+||++.. + +.++-...-.||++ +.|.+++. .-.|.+++++++.+.+....... ....+|..+.
T Consensus 818 g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt--~gK~lggG--~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~a 893 (1013)
T PRK06148 818 GGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVT--MGKPIGNG--HPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCA 893 (1013)
T ss_pred CCEEEEEecccCCCCCCCcchhhhhcCCCcceee--ecccccCC--cceEEEEEcHHHHhhccCCCccccCCCCCHHHHH
Confidence 999999998532 1 11221222358877 69999864 35788888888887764321111 1123677666
Q ss_pred HHHHhhHHHHHH--HHHHHHHHHHHHHHH----HcCCCeEEEecCCC
Q 013019 398 LIIRGMKTLHLR--VQQQNSTALRMAEIL----EAHPKVLLLFITLL 438 (451)
Q Consensus 398 l~lrgL~tl~~R--l~~~~~nA~~Lae~L----~~~p~V~~V~yPgL 438 (451)
.++..|+.+... +++..+....|.+.| +++|.|..|+.-||
T Consensus 894 aa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl 940 (1013)
T PRK06148 894 IGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGL 940 (1013)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeece
Confidence 666666655321 233334444444444 34676666655443
No 368
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.79 E-value=9.5e-07 Score=99.58 Aligned_cols=230 Identities=13% Similarity=0.113 Sum_probs=134.9
Q ss_pred CCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHcc-----C----------------CCeEEEcCCCCcc
Q 013019 206 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVP-----A----------------GGHIVTTTDCYRK 261 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all~-----~----------------GD~VIv~~~~Y~~ 261 (451)
.+.++...+|.++|.++.+. ..+.+.+||++|+..++....+ . ..+||.-...|.+
T Consensus 405 ~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG 484 (817)
T PLN02974 405 ENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHG 484 (817)
T ss_pred ccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCC
Confidence 34677778888888886652 4577778999999988764421 1 2358888888866
Q ss_pred -hHHHHHHh--------h-hc----CCcEE----EE---------eCCC-------------------C-----------
Q 013019 262 -TRIFIETV--------L-PK----MGITA----TV---------IDPA-------------------D----------- 284 (451)
Q Consensus 262 -t~~~l~~~--------l-~~----~Gi~v----~~---------vd~~-------------------D----------- 284 (451)
|...+... + .. .+..+ .. ++.. |
T Consensus 485 ~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~ 564 (817)
T PLN02974 485 DTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKA 564 (817)
T ss_pred CCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhhhHH
Confidence 33222110 0 00 00000 00 0000 0
Q ss_pred -HHHHHHhhc-------CCCeEEEEEeCC-CCCccccc-c---HHHHHHHHHhcCCEEEEecCCCCC------Ccccccc
Q 013019 285 -MEGLEAALN-------NNNVSLFFTESP-TNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATP------LNQKALS 345 (451)
Q Consensus 285 -~d~Le~ai~-------~~~tklV~lesP-sNPtG~v~-D---L~~IaelA~~~g~~lVVD~tfa~~------~~~~pl~ 345 (451)
.+.+++.|+ .+++.+|++|-. ..-.|.+. + +++|.++|++||+++|.||++... +..+-+.
T Consensus 565 ~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~g 644 (817)
T PLN02974 565 YRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLG 644 (817)
T ss_pred HHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcC
Confidence 144666664 235899999974 44445544 2 789999999999999999996432 1122222
Q ss_pred CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH------hHhhCCCccHHHHHHHHHhhHHHHHH--HHHHHHHH
Q 013019 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL------HHVLGGALNPNAAYLIIRGMKTLHLR--VQQQNSTA 417 (451)
Q Consensus 346 ~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~------~~~~G~~ls~~~a~l~lrgL~tl~~R--l~~~~~nA 417 (451)
.-.||++ +.|.++|.- +-.|.+++++++.+.+..- ........+|..+..++..|+.+... .+...+++
T Consensus 645 v~PDIi~--~gKgLtgG~-~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~ 721 (817)
T PLN02974 645 CKPDIAC--YAKLLTGGL-VPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPG 721 (817)
T ss_pred CCCCEEe--ecccccCCC-CccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 2358888 789998642 3467788888888876421 11112234677777776666655431 11222222
Q ss_pred --------HHHHHHHHcCCCeEEEecCCC
Q 013019 418 --------LRMAEILEAHPKVLLLFITLL 438 (451)
Q Consensus 418 --------~~Lae~L~~~p~V~~V~yPgL 438 (451)
..+.+.|+++|.|..|+.-|+
T Consensus 722 ~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl 750 (817)
T PLN02974 722 SRLRELWDEELVRAISSLPNVERVVSLGT 750 (817)
T ss_pred HHHHHHHHHHHHHHHhhCCCeeEEEeeee
Confidence 233345567898888876654
No 369
>PLN02452 phosphoserine transaminase
Probab=98.72 E-value=4.2e-07 Score=93.91 Aligned_cols=205 Identities=11% Similarity=0.017 Sum_probs=127.6
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEe-CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe---C-
Q 013019 210 PTTVVVEEKMSALEGAE---STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI---D- 281 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae---~~vv~-sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v---d- 281 (451)
...++.++.|.++++.+ +++++ ++|+.++.++++.++++||++++....+.+.+ +.+.++++|...... +
T Consensus 52 ~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r--~~~~a~~~g~~~~~~~~~~~ 129 (365)
T PLN02452 52 SIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKK--AAKEAKKYCKTNVIASGKDE 129 (365)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCCCcEEEecCCC
Confidence 34566788889999863 34444 68889999999999999998777665444422 224456666543332 1
Q ss_pred ----CCCHHHHHHhhcCCCeEEEEEeCCCCCcccc-ccHHHHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEEECC
Q 013019 282 ----PADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSA 355 (451)
Q Consensus 282 ----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v-~DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv~S~ 355 (451)
..++++++ ..+ +.+.|+++.-.-.+|.. .|++++. ++++|+|.+...+ ...+.-++|+| +.|.
T Consensus 130 ~~~~~~~~~~~~--~~~-~~~~v~~~hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~v~--~~sa 198 (365)
T PLN02452 130 KYTKIPSVSEWE--LTP-DAKFVHICANETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYGVI--YAGA 198 (365)
T ss_pred CCCCCCChHHcC--CCC-CCcEEEECCCCCCCcEecCcccccC------CCeEEEECCccccCcccCHHHcCEE--EEec
Confidence 23455542 222 36777774433456773 6776664 3899999985432 12223345554 4699
Q ss_pred cccCCccccceeEEEEeCHHHHHHHHHHhH-------hh-----CCCccHHHHHHHHHhhHH------HHHHHHHHHHHH
Q 013019 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VL-----GGALNPNAAYLIIRGMKT------LHLRVQQQNSTA 417 (451)
Q Consensus 356 SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~-------~~-----G~~ls~~~a~l~lrgL~t------l~~Rl~~~~~nA 417 (451)
.|.++.+| .|+++.++++++++..... .. -.+++....+.+...|++ +..+.+++.+.+
T Consensus 199 qK~lGP~G---l~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a 275 (365)
T PLN02452 199 QKNVGPSG---VTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKA 275 (365)
T ss_pred ccccCCCC---eEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 99998666 7888899988876542110 00 023333444444444444 345567778889
Q ss_pred HHHHHHHHcCCCe
Q 013019 418 LRMAEILEAHPKV 430 (451)
Q Consensus 418 ~~Lae~L~~~p~V 430 (451)
+.+.++|++.+++
T Consensus 276 ~~l~~~l~~~~G~ 288 (365)
T PLN02452 276 DLLYDAIDESNGF 288 (365)
T ss_pred HHHHHHHHhCCCc
Confidence 9999999988765
No 370
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.72 E-value=4.1e-07 Score=91.65 Aligned_cols=214 Identities=19% Similarity=0.146 Sum_probs=136.4
Q ss_pred CchhHHHHHHH----HHhhhCC---CcEE--EeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHH--HHHHhhhcCCcE
Q 013019 208 GNPTTVVVEEK----MSALEGA---ESTV--IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRI--FIETVLPKMGIT 276 (451)
Q Consensus 208 ~npt~~~Lee~----LA~l~ga---e~~v--v~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~--~l~~~l~~~Gi~ 276 (451)
||...+++|.. --+.++. .+.| -.=||+-|++.+..++++|+|+|.--+.-.|+... +.... ++.-..
T Consensus 80 Gne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~-kkISa~ 158 (477)
T KOG2467|consen 80 GNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPT-KKISAT 158 (477)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCC-ceeeee
Confidence 67777766433 2234443 2333 33499999999999999999999988877766321 11111 111111
Q ss_pred EEEe-------C----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCC-----CCc
Q 013019 277 ATVI-------D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-----PLN 340 (451)
Q Consensus 277 v~~v-------d----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~-----~~~ 340 (451)
-.++ | ..|.|.||+....-++|+|+.-. +-.-+.+|.+++.+||.+.|+.++.|-++.+ .+.
T Consensus 159 SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~--SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vi 236 (477)
T KOG2467|consen 159 SIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGT--SAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVI 236 (477)
T ss_pred eeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEecc--ccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccC
Confidence 1111 1 13778888766555678888743 3466888999999999999999999999644 455
Q ss_pred cccccCCCcEEEECCcccCCccccceeEEEEeCH---------------HHHHHHHHHh-H-hhCCCcc-HHHHH-HHHH
Q 013019 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG---------------KLVTQIRNLH-H-VLGGALN-PNAAY-LIIR 401 (451)
Q Consensus 341 ~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~---------------eli~~lr~~~-~-~~G~~ls-~~~a~-l~lr 401 (451)
..|+++ +|||..+.||.|-|+. ||+|.-++ ++-+++...- . ..|+.-+ ...+. .++.
T Consensus 237 psPFey-~DiVTTTTHKsLRGPR---g~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALk 312 (477)
T KOG2467|consen 237 PSPFEY-CDIVTTTTHKSLRGPR---GAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALK 312 (477)
T ss_pred CCcccc-cceeeccccccccCCc---ceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHH
Confidence 678887 9999999999999995 88887443 1223333221 1 1122111 11111 1122
Q ss_pred h--hHHHHHHHHHHHHHHHHHHHHHHcCC
Q 013019 402 G--MKTLHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 402 g--L~tl~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
. -..+..-.++..+|++.|++.|.++.
T Consensus 313 Qa~tpefk~Yq~qV~~Nakala~~l~~~G 341 (477)
T KOG2467|consen 313 QAMTPEFKEYQKQVLKNAKALASALISRG 341 (477)
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2 23455667788899999999998763
No 371
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.71 E-value=2.9e-06 Score=86.66 Aligned_cols=198 Identities=14% Similarity=0.168 Sum_probs=109.3
Q ss_pred hhHHHHHHHHHhhhCC--CcEEEeCCHH-HHHHHHH-HHHcc--C----------CCeEEEcCCCCcchHHHHHHhhhcC
Q 013019 210 PTTVVVEEKMSALEGA--ESTVIMASGM-SASTVML-LALVP--A----------GGHIVTTTDCYRKTRIFIETVLPKM 273 (451)
Q Consensus 210 pt~~~Lee~LA~l~ga--e~~vv~sSG~-aAi~~al-~all~--~----------GD~VIv~~~~Y~~t~~~l~~~l~~~ 273 (451)
....++++.+++++|. ++.++.++.+ .-++-++ .+++. . .=+.+++-|.|...+. +++.+
T Consensus 69 ~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFa----i~E~~ 144 (425)
T PF12897_consen 69 DGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFA----ITEHF 144 (425)
T ss_dssp S--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHH----HHHHC
T ss_pred CChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHH----HHHhh
Confidence 4467899999999997 5666666555 2222222 12211 1 1269999999987764 45678
Q ss_pred CcEEEEeC----CCCHHHHHHhhc-CCCeEEEEEeCC--CCCccccccHHHHHHHH----HhcCCEEEEecCCCCCCc--
Q 013019 274 GITATVID----PADMEGLEAALN-NNNVSLFFTESP--TNPFLRCVDVKLVSDLC----HKKGAIVCIDGTFATPLN-- 340 (451)
Q Consensus 274 Gi~v~~vd----~~D~d~Le~ai~-~~~tklV~lesP--sNPtG~v~DL~~IaelA----~~~g~~lVVD~tfa~~~~-- 340 (451)
|++...|+ ..|.|.+|+.+. +..+|.||+ .| +||+|.++.-+-+.++| ...+..++-||+|+.--+
T Consensus 145 Giemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWc-VP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~ 223 (425)
T PF12897_consen 145 GIEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWC-VPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYD 223 (425)
T ss_dssp T-EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE--SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSS
T ss_pred CcEEEecCCCCCCCCHHHHHHHHhcCCccceEEe-CCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccc
Confidence 99887775 458999999884 335899987 56 59999999766555555 357899999999865321
Q ss_pred c-------ccc----cCC---CcEEEECCccc-CCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHH---HHHh
Q 013019 341 Q-------KAL----SLG---ADLVLHSATKF-IGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL---IIRG 402 (451)
Q Consensus 341 ~-------~pl----~~G---aDiVv~S~SK~-l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l---~lrg 402 (451)
. +-+ +.| --++..|+||. +.|.| .+++.++++-++.+++..........-.++.. .++.
T Consensus 224 ~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaG---va~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d 300 (425)
T PF12897_consen 224 EEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAG---VAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFKD 300 (425)
T ss_dssp SSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS----EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHS
T ss_pred cccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcc---eeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhcC
Confidence 1 111 112 23778899995 55665 78889998888887766555444333333322 2233
Q ss_pred hH-HHHHHHHHHHH
Q 013019 403 MK-TLHLRVQQQNS 415 (451)
Q Consensus 403 L~-tl~~Rl~~~~~ 415 (451)
.+ .+...|++|.+
T Consensus 301 ~~gGv~aHM~kHa~ 314 (425)
T PF12897_consen 301 AEGGVRAHMRKHAA 314 (425)
T ss_dssp HHTHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHH
Confidence 34 44455666544
No 372
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.68 E-value=1.5e-06 Score=88.85 Aligned_cols=213 Identities=20% Similarity=0.225 Sum_probs=137.2
Q ss_pred HHHHHHHHHhhh---CCCcEEEeCCHHHHHHHHHHHHccCC--C------eEEEcCCCCcc-hHHHHHHh-hhcCCc---
Q 013019 212 TVVVEEKMSALE---GAESTVIMASGMSASTVMLLALVPAG--G------HIVTTTDCYRK-TRIFIETV-LPKMGI--- 275 (451)
Q Consensus 212 ~~~Lee~LA~l~---gae~~vv~sSG~aAi~~al~all~~G--D------~VIv~~~~Y~~-t~~~l~~~-l~~~Gi--- 275 (451)
...|+++|.+.. .++.+.++.||++|+.++|....+.. + .+|....+|.+ +...+... -..++.
T Consensus 100 av~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~ 179 (433)
T KOG1401|consen 100 AVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFD 179 (433)
T ss_pred HHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCC
Confidence 556788888877 46788899999999999987554321 2 38888777765 44444311 112222
Q ss_pred ----EEEEeCCCCHHHHHHhhcCCC--eEEEEEeCCCCCccccc-c---HHHHHHHHHhcCCEEEEecCCCCC------C
Q 013019 276 ----TATVIDPADMEGLEAALNNNN--VSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATP------L 339 (451)
Q Consensus 276 ----~v~~vd~~D~d~Le~ai~~~~--tklV~lesPsNPtG~v~-D---L~~IaelA~~~g~~lVVD~tfa~~------~ 339 (451)
++......|..++++.++.++ +.+|++|-...--|... | +..|.++|+++|+++|.||.+... .
T Consensus 180 p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~ 259 (433)
T KOG1401|consen 180 PIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGW 259 (433)
T ss_pred CCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHH
Confidence 233344568999999997653 78999997775555443 2 778999999999999999996431 2
Q ss_pred ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH-hhCC--CccHHHHHHHHHhhHHHH--HHHHHHH
Q 013019 340 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGG--ALNPNAAYLIIRGMKTLH--LRVQQQN 414 (451)
Q Consensus 340 ~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~-~~G~--~ls~~~a~l~lrgL~tl~--~Rl~~~~ 414 (451)
.+..+..-.||.+ +.|.++|. +..|+..+++++.+.+..-.. +.|. .-+|+.+......|+++. ..+++..
T Consensus 260 a~e~~~~~PDI~t--~aK~L~gG--lPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs 335 (433)
T KOG1401|consen 260 AQEYFGVTPDITT--VAKPLGGG--LPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVS 335 (433)
T ss_pred HHHHhCcCCccee--ehhhccCC--ceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHH
Confidence 2332333347665 79999876 578888899888887764332 1232 236777766666666653 2334444
Q ss_pred HHH----HHHHHHHHcCC
Q 013019 415 STA----LRMAEILEAHP 428 (451)
Q Consensus 415 ~nA----~~Lae~L~~~p 428 (451)
+.. +.+-+++.+.+
T Consensus 336 ~~~k~L~~~l~e~~~~~~ 353 (433)
T KOG1401|consen 336 KIGKELRKLLDEYLKKTP 353 (433)
T ss_pred HHHHHHHHHHHHHhccCC
Confidence 433 44444554444
No 373
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.65 E-value=2.1e-06 Score=90.66 Aligned_cols=162 Identities=13% Similarity=0.155 Sum_probs=98.7
Q ss_pred CCCchhHHHHHHHHHhhh---CCCcEEEeCCHHHHHHHHHHHHcc--------C------CCeEEEcCCCCcchH-HHHH
Q 013019 206 RYGNPTTVVVEEKMSALE---GAESTVIMASGMSASTVMLLALVP--------A------GGHIVTTTDCYRKTR-IFIE 267 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~---gae~~vv~sSG~aAi~~al~all~--------~------GD~VIv~~~~Y~~t~-~~l~ 267 (451)
.+.++...++-++|+++. +.+.+.+++||++|+.+++..... . +.+||.....|.+.. ..+.
T Consensus 81 ~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als 160 (431)
T TIGR03251 81 DVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLS 160 (431)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhh
Confidence 345666777777888774 236678889999999998875431 1 367888888887632 2221
Q ss_pred Hh----hh-cCC-------cEEEEe---------C------CCCHHHHHHhhc--CCCeEEEEEeCCCCCccccc----c
Q 013019 268 TV----LP-KMG-------ITATVI---------D------PADMEGLEAALN--NNNVSLFFTESPTNPFLRCV----D 314 (451)
Q Consensus 268 ~~----l~-~~G-------i~v~~v---------d------~~D~d~Le~ai~--~~~tklV~lesPsNPtG~v~----D 314 (451)
.. .. .+. +..... + ..+++++++.+. .+++.+|++|......|.+. -
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~ 240 (431)
T TIGR03251 161 LTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEF 240 (431)
T ss_pred ccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHH
Confidence 00 00 000 000000 0 012445555663 23589999997776667654 3
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCC-C-----ccccccCCCcEEEECCcccCCccccceeEEEEeCH
Q 013019 315 VKLVSDLCHKKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG 374 (451)
Q Consensus 315 L~~IaelA~~~g~~lVVD~tfa~~-~-----~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~ 374 (451)
+++|.++|++||+++|+||++... . ..+....-.|+++ ++|.+ + .+|++.+++
T Consensus 241 l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~--~gK~~--~---~~g~~~~~~ 299 (431)
T TIGR03251 241 LRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVA--FGKKT--Q---VCGIMAGRR 299 (431)
T ss_pred HHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEE--ecccC--c---cceEEecch
Confidence 899999999999999999996521 1 1122233468887 67876 2 367776553
No 374
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.61 E-value=1.3e-06 Score=88.87 Aligned_cols=229 Identities=17% Similarity=0.162 Sum_probs=135.6
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHH-ccCC-CeEEEcCCCCcchHH-HHHHh-hh--cC--
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL-VPAG-GHIVTTTDCYRKTRI-FIETV-LP--KM-- 273 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~al-l~~G-D~VIv~~~~Y~~t~~-~l~~~-l~--~~-- 273 (451)
..-|-+|...+|.++|++++-. ..+.+++||++|+.++++.. +-.| -+||.-+..|.+.-. .+... +. +.
T Consensus 86 t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~ 165 (442)
T KOG1404|consen 86 TSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNF 165 (442)
T ss_pred eccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccC
Confidence 3445677788888888887754 45677789999999887643 2222 367777777766321 11100 10 11
Q ss_pred -Cc--EEEEeCCC---------C---------HHHHHHhhc---CCCeEEEEEeCCCCCcccccc----HHHHHHHHHhc
Q 013019 274 -GI--TATVIDPA---------D---------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (451)
Q Consensus 274 -Gi--~v~~vd~~---------D---------~d~Le~ai~---~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~ 325 (451)
+. -+...... + .+++++.+. +..+...+.|+...-.|.+.. ++++.++|+++
T Consensus 166 ~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~ 245 (442)
T KOG1404|consen 166 PGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKR 245 (442)
T ss_pred CCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHc
Confidence 01 01111100 1 133444442 234788899999877777653 89999999999
Q ss_pred CCEEEEecCCCC------CCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh-HhhCCCccHHHHHH
Q 013019 326 GAIVCIDGTFAT------PLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGALNPNAAYL 398 (451)
Q Consensus 326 g~~lVVD~tfa~------~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-~~~G~~ls~~~a~l 398 (451)
|.++|.||++.. .+..+....-.||| ++.|.++.. .-.|.+++.+|+.+-+.+-. ....-.-+|..+..
T Consensus 246 Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIv--TmAKgiGnG--~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~av 321 (442)
T KOG1404|consen 246 GGLFIADEVQTGFGRTGHMWGFESHGVVPDIV--TMAKGIGNG--FPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAV 321 (442)
T ss_pred CCEEEehhhhhccccccccccccccCCCccHH--HHHhhccCC--CcceeeecCHHHHHHHHhccccccccCCCchhHHH
Confidence 999999998532 12222111113554 599999865 35677788888877766543 22222335666666
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHH--------cCCCeEEEecCCC
Q 013019 399 IIRGMKTLHLRVQQQNSTALRMAEILE--------AHPKVLLLFITLL 438 (451)
Q Consensus 399 ~lrgL~tl~~Rl~~~~~nA~~Lae~L~--------~~p~V~~V~yPgL 438 (451)
.+.-|+-+.. ++..+|+..+..+|. +||.|-.|+--||
T Consensus 322 g~aVL~Vike--e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GL 367 (442)
T KOG1404|consen 322 GLAVLKVIKE--ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGL 367 (442)
T ss_pred HHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHhhcCCceeeccccee
Confidence 5555555443 344555555555443 4788877776665
No 375
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.59 E-value=3.9e-06 Score=86.53 Aligned_cols=200 Identities=13% Similarity=0.083 Sum_probs=121.1
Q ss_pred HHHHHHHHHhhhCCC---cEEEe-CCHHHHHHHHHHHHccCCCeEE-EcCCCCcchHHHHHHhhhcCCcEEEEeC-----
Q 013019 212 TVVVEEKMSALEGAE---STVIM-ASGMSASTVMLLALVPAGGHIV-TTTDCYRKTRIFIETVLPKMGITATVID----- 281 (451)
Q Consensus 212 ~~~Lee~LA~l~gae---~~vv~-sSG~aAi~~al~all~~GD~VI-v~~~~Y~~t~~~l~~~l~~~Gi~v~~vd----- 281 (451)
..+.++.|.++++.+ +.+++ ++|+.++.++.+.++.+||+++ +....+.+.+ +. ..++++| ++..+.
T Consensus 51 ~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r-~~-~ea~~~g-~v~~~~~~~~~ 127 (364)
T PRK12462 51 LAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRK-AI-GEASRVA-AMRVVWDGAAS 127 (364)
T ss_pred HHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHH-HH-HHHHhcC-CceEecCcCCC
Confidence 456688888888862 34444 4577999999999999999654 3333333322 22 3455555 343332
Q ss_pred ----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCC---CCCccccccCCCcEEEEC
Q 013019 282 ----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA---TPLNQKALSLGADLVLHS 354 (451)
Q Consensus 282 ----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa---~~~~~~pl~~GaDiVv~S 354 (451)
..+++++ .+.+ +.+.|+++.-.-.+|...+ ++.+.+++++|+|.+-. .++..+ ++ |+++.+
T Consensus 128 ~~~~~p~~~~~--~~~~-d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~--~~--dvi~ag 195 (364)
T PRK12462 128 GYRTLPSLAEL--DWDA-RAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVE--AY--GMVYAH 195 (364)
T ss_pred CCCcCCCHHHh--ccCC-CCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChH--Hc--cEEEee
Confidence 1234444 2333 3677776433334566664 33334689999999832 233222 33 999999
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHHh-------H-----hhCCCccHHHHHHHHHhhHHH-------HHHHHHHHH
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------H-----VLGGALNPNAAYLIIRGMKTL-------HLRVQQQNS 415 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-------~-----~~G~~ls~~~a~l~lrgL~tl-------~~Rl~~~~~ 415 (451)
..|.++.+| .++++.+++++++..... . .+-.+++.+..|++...++++ ..+.+++.+
T Consensus 196 sQKnlgP~G---ltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ 272 (364)
T PRK12462 196 AQKNLGPAG---VTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINAR 272 (364)
T ss_pred ccccCCCCc---eEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 999999665 678888998887654311 0 011233444445444444443 345677888
Q ss_pred HHHHHHHHHHcCCC
Q 013019 416 TALRMAEILEAHPK 429 (451)
Q Consensus 416 nA~~Lae~L~~~p~ 429 (451)
.++.+.+++.+.++
T Consensus 273 ka~~ly~~id~~~~ 286 (364)
T PRK12462 273 KAAMLYATLDALNE 286 (364)
T ss_pred HHHHHHHHHHhCCC
Confidence 89999999998874
No 376
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.57 E-value=2.6e-06 Score=90.65 Aligned_cols=153 Identities=14% Similarity=0.108 Sum_probs=95.2
Q ss_pred CCchhHHHHHHHHHh----hhC--CCcEEEeCCHHHHHHHHHHHHcc--------------------------CC---Ce
Q 013019 207 YGNPTTVVVEEKMSA----LEG--AESTVIMASGMSASTVMLLALVP--------------------------AG---GH 251 (451)
Q Consensus 207 ~~npt~~~Lee~LA~----l~g--ae~~vv~sSG~aAi~~al~all~--------------------------~G---D~ 251 (451)
+.++....|.++|.+ +.. .+.+.+++||++|+.+++..... +| .+
T Consensus 98 ~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ 177 (464)
T TIGR00699 98 LGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLS 177 (464)
T ss_pred CCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCE
Confidence 567777777777754 443 25677889999999998875421 11 26
Q ss_pred EEEcCCCCcch-HHHHHHh----hhcCCc---EEEEeCC-------------------CCHHHHHHhhcC--CCeEEEEE
Q 013019 252 IVTTTDCYRKT-RIFIETV----LPKMGI---TATVIDP-------------------ADMEGLEAALNN--NNVSLFFT 302 (451)
Q Consensus 252 VIv~~~~Y~~t-~~~l~~~----l~~~Gi---~v~~vd~-------------------~D~d~Le~ai~~--~~tklV~l 302 (451)
||.....|.+. ...+... ....+. .+..++. .+++.+++++++ .++.+|++
T Consensus 178 ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~ 257 (464)
T TIGR00699 178 ILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIV 257 (464)
T ss_pred EEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 88888888773 2222110 001011 1111110 135567777742 25899999
Q ss_pred eCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCC-C-----ccccccCC--CcEEEECCcccCCc
Q 013019 303 ESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-L-----NQKALSLG--ADLVLHSATKFIGG 361 (451)
Q Consensus 303 esPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~-~-----~~~pl~~G--aDiVv~S~SK~l~G 361 (451)
|......|.+.+ +++|.++|++||+++|+||++... . ..+....- .||++ ++|.+++
T Consensus 258 EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t--~gK~lg~ 326 (464)
T TIGR00699 258 EPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVT--FSKKFQT 326 (464)
T ss_pred eCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEE--ehhhhcc
Confidence 988777777776 999999999999999999985211 1 11111222 68866 6999864
No 377
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.49 E-value=1.6e-05 Score=84.23 Aligned_cols=221 Identities=14% Similarity=0.139 Sum_probs=123.4
Q ss_pred CCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHcc--------CC------CeEEEcCCCCcchHH-HHH
Q 013019 206 RYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP--------AG------GHIVTTTDCYRKTRI-FIE 267 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~g---ae~~vv~sSG~aAi~~al~all~--------~G------D~VIv~~~~Y~~t~~-~l~ 267 (451)
.+.++...+|.++|+++.+ .+.+.+++||++|+..++..... .| .+||.....|.+... .+.
T Consensus 88 ~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als 167 (443)
T PRK08297 88 DVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLS 167 (443)
T ss_pred CcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhh
Confidence 3456777778888888762 35788889999999999875521 12 568888888877322 221
Q ss_pred Hhh---------hcCC---cEEEEeC----C-----------CCHHHHHHhhc--CCCeEEEEEeCCCCCccccc----c
Q 013019 268 TVL---------PKMG---ITATVID----P-----------ADMEGLEAALN--NNNVSLFFTESPTNPFLRCV----D 314 (451)
Q Consensus 268 ~~l---------~~~G---i~v~~vd----~-----------~D~d~Le~ai~--~~~tklV~lesPsNPtG~v~----D 314 (451)
..- ...+ +....+. . .+++++++.+. .+++.+|++|......|.+. -
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~y 247 (443)
T PRK08297 168 LTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEF 247 (443)
T ss_pred hcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHH
Confidence 100 0000 1000000 0 12345566664 23589999997765556542 3
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCC-Cc-----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHH-Hh--H
Q 013019 315 VKLVSDLCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-LH--H 385 (451)
Q Consensus 315 L~~IaelA~~~g~~lVVD~tfa~~-~~-----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~-~~--~ 385 (451)
+++|.++|++||+++|+||++... .. ..-+..-.||++ ++|.++ .+|++.+++ +.+.... +. .
T Consensus 248 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~-----~~a~l~~~~-i~~~~~~~~~~~~ 319 (443)
T PRK08297 248 FAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVA--FGKKTQ-----VCGIMAGRR-VDEVEDNVFAVSS 319 (443)
T ss_pred HHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEE--eccccc-----ccceecchH-HHHhhhhhccCcc
Confidence 899999999999999999996421 11 111222368887 789873 356665543 2221111 10 0
Q ss_pred hhCC--CccHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH----cCCCeE-EEe
Q 013019 386 VLGG--ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILE----AHPKVL-LLF 434 (451)
Q Consensus 386 ~~G~--~ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L~----~~p~V~-~V~ 434 (451)
..+. ..+|..+..++..|+.+.. .+++..+..+.+.+.|+ ++|.+. .|+
T Consensus 320 ~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vr 377 (443)
T PRK08297 320 RINSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVR 377 (443)
T ss_pred ccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeee
Confidence 1111 2466666555555554432 23444444455544443 356443 444
No 378
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.47 E-value=1.7e-05 Score=80.73 Aligned_cols=212 Identities=15% Similarity=0.201 Sum_probs=124.3
Q ss_pred HHHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHHc-cCCCeEEEcCCCCcchHHHHHHhhhcCC-cEEEE-e
Q 013019 212 TVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMG-ITATV-I 280 (451)
Q Consensus 212 ~~~Lee~LA~l~----ga---e~~vv~sSG~-aAi~~al~all-~~GD~VIv~~~~Y~~t~~~l~~~l~~~G-i~v~~-v 280 (451)
..-+++.+|++. |. .+-+++|+|. .|+..++..++ .+.+-|+++-|-|+-.-.-+ ..+| ..+.+ .
T Consensus 115 v~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti----~l~~~~~v~YyL 190 (475)
T KOG0258|consen 115 VPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATI----SLLGGTQVPYYL 190 (475)
T ss_pred ChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHH----HHhCCcccceee
Confidence 344556666544 42 2345666666 78877776654 45678999998876432222 2222 22222 2
Q ss_pred C-----CCCHHHHHHhhcC----CCeEEEEEeCCCCCccccc---cHHHHHHHHHhcCCEEEEecCCCCCCccc------
Q 013019 281 D-----PADMEGLEAALNN----NNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQK------ 342 (451)
Q Consensus 281 d-----~~D~d~Le~ai~~----~~tklV~lesPsNPtG~v~---DL~~IaelA~~~g~~lVVD~tfa~~~~~~------ 342 (451)
| ..|.++|++.+++ -+++++++-+|.||||.+. .|++|.++|++.|+.|+.|+.|-.-+...
T Consensus 191 dEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhS 270 (475)
T KOG0258|consen 191 DEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHS 270 (475)
T ss_pred ccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHh
Confidence 3 2477777776653 2477777779999999997 58899999999999999999863321111
Q ss_pred ---c-ccCC---C----cEEEECCcccCCccccceeEEEEe---CHHHHHHHHHHhH------hhCC-----Cc------
Q 013019 343 ---A-LSLG---A----DLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHH------VLGG-----AL------ 391 (451)
Q Consensus 343 ---p-l~~G---a----DiVv~S~SK~l~G~gdv~gG~Iv~---~~eli~~lr~~~~------~~G~-----~l------ 391 (451)
. .++| . -+..+|.||.+.|--.-+||+.=. .++..+.+.+... ..|. .+
T Consensus 271 fKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pg 350 (475)
T KOG0258|consen 271 FKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPG 350 (475)
T ss_pred HHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecCCCCCC
Confidence 0 1111 2 156789999888765567888642 2344443333221 1110 01
Q ss_pred -cHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 013019 392 -NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 392 -s~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
..++.+... -..-++...+.|+.+-+.++..++|..
T Consensus 351 d~Sy~~~~~E-----kd~il~~l~~ra~l~~~~~ns~~gi~c 387 (475)
T KOG0258|consen 351 DPSYDLFSSE-----KDGILSSLRSRAKLTEDAFNSLEGISC 387 (475)
T ss_pred Ccchhhhhhh-----hHhHHHHHHHHhHHHHHHHhhcCceee
Confidence 112222211 122244555677888888888888754
No 379
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.43 E-value=3e-06 Score=87.10 Aligned_cols=153 Identities=18% Similarity=0.239 Sum_probs=98.6
Q ss_pred CcEEEeC--CHHHHHHHHHHHHc--cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC--------CCHHHHHHhhc
Q 013019 226 ESTVIMA--SGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALN 293 (451)
Q Consensus 226 e~~vv~s--SG~aAi~~al~all--~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--------~D~d~Le~ai~ 293 (451)
..+++++ +|| ++.+.++++. +.++.||.+.-.+.+.+..+ ...|.++..++. .|++.++++++
T Consensus 75 ~~~~~vP~atgm-~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai----~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~ 149 (389)
T PF05889_consen 75 KSCFVVPMATGM-SLTLCLLALRMRPKAKYVIWPRIDQKSCFKAI----ERAGLEPVVVENVLEGDELITDLEAIEAKIE 149 (389)
T ss_dssp CEEEEESS-HHH-HHHHHHHHHHHHCT--EEEEEEEETHHHHHHH----HHTT-EEEEE-EEEETTEEEEHHHHHHHHHH
T ss_pred cceEEEeccccc-HHHHHHHHHhcccCCceEEEeeccccchHHHH----HhcCCeEEEeeccCCCCeeeccHHHHHHHHH
Confidence 5567764 555 5556666664 56789999887777665433 344777666652 25777777775
Q ss_pred C--CCeEEEEEeCCCCCcccccc-HHHHHHHHHhcCCEEEEecCCCCC------CccccccCC-CcEEEECCcccCCccc
Q 013019 294 N--NNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFATP------LNQKALSLG-ADLVLHSATKFIGGHN 363 (451)
Q Consensus 294 ~--~~tklV~lesPsNPtG~v~D-L~~IaelA~~~g~~lVVD~tfa~~------~~~~pl~~G-aDiVv~S~SK~l~G~g 363 (451)
+ .+..+.++.+++-..++..| +++|+++|+++|++.++-++|+-- ..++....| .|+++.|+-|-|--+.
T Consensus 150 ~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPv 229 (389)
T PF05889_consen 150 ELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPV 229 (389)
T ss_dssp HHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEES
T ss_pred HhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEecC
Confidence 3 13578888888888899988 999999999999999999999851 123333444 6999999999887663
Q ss_pred cceeEEEEe-CHHHHHHHHHHhH
Q 013019 364 DVLAGSISG-SGKLVTQIRNLHH 385 (451)
Q Consensus 364 dv~gG~Iv~-~~eli~~lr~~~~ 385 (451)
.++.+++ ++..+..+.+...
T Consensus 230 --Ggai~As~~~~~i~~vs~~Yp 250 (389)
T PF05889_consen 230 --GGAIMASFDPSGILAVSKEYP 250 (389)
T ss_dssp --SHEEEEESSHHHHHHHHHTSH
T ss_pred --CCcEEEecCHHHHHHHHHHhh
Confidence 2344444 4567777765443
No 380
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.26 E-value=2e-05 Score=81.88 Aligned_cols=212 Identities=16% Similarity=0.139 Sum_probs=132.9
Q ss_pred HHHHHHhhhCCCc---EEEeCCHHHHHHHHHHHH---ccC--C---CeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 215 VEEKMSALEGAES---TVIMASGMSASTVMLLAL---VPA--G---GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 215 Lee~LA~l~gae~---~vv~sSG~aAi~~al~al---l~~--G---D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
.-..++.+++++. ...+++|++++..+.... .+. | -.++++.. ....+++....++++++.++.
T Consensus 125 ~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~----v~~a~eK~a~yf~v~l~~V~~~ 200 (491)
T KOG1383|consen 125 CVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQN----VHAAFEKAARYFEVELREVPLD 200 (491)
T ss_pred HHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHH----HHHHHHHHHhhEEEEEEeeecc
Confidence 3455677777643 233455667754444332 122 2 12444332 334455666777887777653
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHh-cCCEEEEecCCCCCCc----cc--cccC---C
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLN----QK--ALSL---G 347 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~-~g~~lVVD~tfa~~~~----~~--pl~~---G 347 (451)
.|+..+.+.++++ |.+|+.+.|+-|+|.+.|+++|.++.-+ +++++++|.+-+.++. .. ++++ |
T Consensus 201 ~~~~~~D~~k~~~~i~eN-ti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~ 279 (491)
T KOG1383|consen 201 EGDYRVDPGKVVRMIDEN-TIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPG 279 (491)
T ss_pred ccceEecHHHHHHHhccc-eEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCC
Confidence 3789999999985 9999999999999999999999999999 9999999999655433 11 2222 2
Q ss_pred CcEEEECCcccCCccccceeEEEE-eCHHHH-HHHHHHhHhhCC----------Cc--cHHHHHHH--HHhhHHHHHHHH
Q 013019 348 ADLVLHSATKFIGGHNDVLAGSIS-GSGKLV-TQIRNLHHVLGG----------AL--NPNAAYLI--IRGMKTLHLRVQ 411 (451)
Q Consensus 348 aDiVv~S~SK~l~G~gdv~gG~Iv-~~~eli-~~lr~~~~~~G~----------~l--s~~~a~l~--lrgL~tl~~Rl~ 411 (451)
+.-+..+.|||--.+. ..|+++ .++++. +++......+|+ .. .-..+|.. .-|-+.+...++
T Consensus 280 V~Sisa~~HKYGl~~~--G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~ 357 (491)
T KOG1383|consen 280 VTSISADGHKYGLAPA--GSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQ 357 (491)
T ss_pred ceeEeeccceeeeeec--CcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHH
Confidence 3344556899843332 134444 444432 222211122221 11 12335543 346677888899
Q ss_pred HHHHHHHHHHHHHHcCCCeEEE
Q 013019 412 QQNSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~~p~V~~V 433 (451)
++.++++.|.+.+++.+++.-+
T Consensus 358 ~ive~~~~l~egie~i~~i~i~ 379 (491)
T KOG1383|consen 358 NIVETARKLREGIENIKGIKIV 379 (491)
T ss_pred HHHHHHHHHHHhhhccccceec
Confidence 9999999999999987666443
No 381
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.19 E-value=2.9e-05 Score=79.96 Aligned_cols=202 Identities=12% Similarity=0.145 Sum_probs=127.9
Q ss_pred CcEEEeCCHHHHHHHHHHHHc-c--C-----C-----C-eEEEcCCCCcchHHHHHHhhhcCC---cEEEEeCC-----C
Q 013019 226 ESTVIMASGMSASTVMLLALV-P--A-----G-----G-HIVTTTDCYRKTRIFIETVLPKMG---ITATVIDP-----A 283 (451)
Q Consensus 226 e~~vv~sSG~aAi~~al~all-~--~-----G-----D-~VIv~~~~Y~~t~~~l~~~l~~~G---i~v~~vd~-----~ 283 (451)
.+.++.++|+-++.-++.... + | | + .+.+++.+|.+.. +....+| -.+..++. .
T Consensus 160 ~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~----kaAa~lg~gtd~c~~v~t~e~Gkm 235 (510)
T KOG0629|consen 160 GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIK----KAAAFLGLGTDHCIKVKTDERGKM 235 (510)
T ss_pred CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHH----HHHHHhccCCceeEEecccccCcc
Confidence 478888888855544443221 1 1 1 2 2444555665543 3333344 23444443 3
Q ss_pred CHHHHHHhhcCCC-----eEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcccc----ccC---CCcEE
Q 013019 284 DMEGLEAALNNNN-----VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA----LSL---GADLV 351 (451)
Q Consensus 284 D~d~Le~ai~~~~-----tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~p----l~~---GaDiV 351 (451)
++++||+.|.+.+ +-+|-...-+...|...||..|+++|++|+.|++||.+++.++.... .-. -++-|
T Consensus 236 ~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~Sv 315 (510)
T KOG0629|consen 236 IPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSV 315 (510)
T ss_pred chHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCce
Confidence 6889988885421 33444444455678889999999999999999999999987644321 111 26889
Q ss_pred EECCcccCCccccceeEEEEeCHH-HHHHHHHHhH---------------------hhCCCccHHHHHHHHH--hhHHHH
Q 013019 352 LHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHH---------------------VLGGALNPNAAYLIIR--GMKTLH 407 (451)
Q Consensus 352 v~S~SK~l~G~gdv~gG~Iv~~~e-li~~lr~~~~---------------------~~G~~ls~~~a~l~lr--gL~tl~ 407 (451)
..+.||+++.+- -.+.+..+.+ ++++...... ..|-..+.+.-|+.++ |.+.++
T Consensus 316 twnpHK~~gapl--qCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe 393 (510)
T KOG0629|consen 316 TWNPHKLMGAPL--QCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFE 393 (510)
T ss_pred eecHHHhhcCcc--hhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHH
Confidence 999999998763 4555544432 3333222110 1233456677888764 667788
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCeEEE
Q 013019 408 LRVQQQNSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 408 ~Rl~~~~~nA~~Lae~L~~~p~V~~V 433 (451)
.++++..++|+.+.+.|++.++-..|
T Consensus 394 ~~v~k~~~lA~yl~~~lrer~~~~~l 419 (510)
T KOG0629|consen 394 AQVDKCLRLAEYLYDRLREREGFEML 419 (510)
T ss_pred HHHHHHHHHHHHHHHHHHhcccceeh
Confidence 88999999999999999998765444
No 382
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.94 E-value=0.00033 Score=72.97 Aligned_cols=237 Identities=15% Similarity=0.231 Sum_probs=143.4
Q ss_pred HHHHhcccCCccccCCCchhHHHHH----HHHHhhhCC-----------CcEEEeCCHHHHHHHHHHHHc-------cCC
Q 013019 192 IDFKEKRRASFEYGRYGNPTTVVVE----EKMSALEGA-----------ESTVIMASGMSASTVMLLALV-------PAG 249 (451)
Q Consensus 192 ~~~~~~~~~~~~Y~R~~npt~~~Le----e~LA~l~ga-----------e~~vv~sSG~aAi~~al~all-------~~G 249 (451)
.++..+..+.-.++....|...+|| ++|+++.+- ...++++|.+++...++++.. +.+
T Consensus 91 admLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~ 170 (511)
T KOG0628|consen 91 ADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSR 170 (511)
T ss_pred HHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcC
Confidence 3444444444556667899999998 455555432 357889999988777776531 222
Q ss_pred C------------eEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC-----CHHHHHHhhcCCC----eEEEEEeCCCCC
Q 013019 250 G------------HIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNNN----VSLFFTESPTNP 308 (451)
Q Consensus 250 D------------~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~-----D~d~Le~ai~~~~----tklV~lesPsNP 308 (451)
+ .+-+++..|.+ +++.+-.-|++++.+..+ +.+.|+++|+++. +-.+++.|-. -
T Consensus 171 ~p~~~e~~~~~~lV~Y~SDqahss----veka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~G-T 245 (511)
T KOG0628|consen 171 PPELHESSVLARLVAYCSDQAHSS----VEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLG-T 245 (511)
T ss_pred CCcccchhhhhhheEEecCcccch----HHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeec-C
Confidence 1 13334444444 334333446666666432 5778888886531 2233332322 2
Q ss_pred cccc--ccHHHHHHHHHhcCCEEEEecCCCCCCc-c---ccccCC---CcEEEECCcccCCccccceeEEE---------
Q 013019 309 FLRC--VDVKLVSDLCHKKGAIVCIDGTFATPLN-Q---KALSLG---ADLVLHSATKFIGGHNDVLAGSI--------- 370 (451)
Q Consensus 309 tG~v--~DL~~IaelA~~~g~~lVVD~tfa~~~~-~---~pl~~G---aDiVv~S~SK~l~G~gdv~gG~I--------- 370 (451)
|+.+ .+|.+|..+|+++|+||+||.+|+.... . +.+-.| +|-+-...||++-.+-|.-.=|+
T Consensus 246 T~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~ 325 (511)
T KOG0628|consen 246 TSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRA 325 (511)
T ss_pred ccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeee
Confidence 3433 4799999999999999999999985322 1 222223 57777778998876655432222
Q ss_pred -EeCHHHHHH--------HHHHhHhhCCCccHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Q 013019 371 -SGSGKLVTQ--------IRNLHHVLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 371 -v~~~eli~~--------lr~~~~~~G~~ls~~~a~l~lr--gL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V 433 (451)
-.++..++- ++.++-.+|-..-..-.|..+| |.+.+..++.++.+.++.+-+.+.+-+..+.+
T Consensus 326 ~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~ 399 (511)
T KOG0628|consen 326 FNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIV 399 (511)
T ss_pred eecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceee
Confidence 122222211 1223333455555667787776 67889999999999999888888877765554
No 383
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=97.83 E-value=9.6e-05 Score=74.71 Aligned_cols=174 Identities=15% Similarity=0.170 Sum_probs=89.5
Q ss_pred hHHHHHHHHHhhhC----C---CcEEEeCCHH-HHHHHHHHHHccC--C----CeEEEcCCCCcchHHHHHHhhhcCCcE
Q 013019 211 TTVVVEEKMSALEG----A---ESTVIMASGM-SASTVMLLALVPA--G----GHIVTTTDCYRKTRIFIETVLPKMGIT 276 (451)
Q Consensus 211 t~~~Lee~LA~l~g----a---e~~vv~sSG~-aAi~~al~all~~--G----D~VIv~~~~Y~~t~~~l~~~l~~~Gi~ 276 (451)
...+|++.|.+|+. + ..-|++++|+ +-+++++.+|... . -+|+...|.|..... ...+++....+
T Consensus 44 ~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~-qt~~f~s~~y~ 122 (363)
T PF04864_consen 44 ISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPE-QTDFFDSRLYK 122 (363)
T ss_dssp S-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHH-HCCCT-BTTEE
T ss_pred ccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHH-HHHhccccCcc
Confidence 35678888888763 1 4678888888 7788888887554 1 268998888876442 22333332222
Q ss_pred EEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc-cccCCCcEEEECC
Q 013019 277 ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-ALSLGADLVLHSA 355 (451)
Q Consensus 277 v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~-pl~~GaDiVv~S~ 355 (451)
.. -|..... .. +...+-+=++++||||.|.+- +.+ .+.-+..+|.|-+|--|-... +-...-||.++++
T Consensus 123 w~-Gda~~~~---~~-~~~~~~IElVTSPNNPDG~lr--~~V---~~g~~~k~I~D~AYYWPhyTpI~~~aD~DiMLFT~ 192 (363)
T PF04864_consen 123 WA-GDASNFK---NS-DNPSPYIELVTSPNNPDGQLR--EAV---LNGSSGKVIHDLAYYWPHYTPITAPADHDIMLFTL 192 (363)
T ss_dssp EE-EECCCGT---T--S-CCGEEEEEESS-TTT--------S---STTTEEEEEEE-TT-STTTS---S-B--SEEEEEH
T ss_pred cc-ccHHhhc---cC-CCCCCeEEEEeCCCCCccccc--chh---cCCCCcceeeeeeeecccccccCCCCCCceEEEEE
Confidence 21 1221111 00 111234447889999999752 122 244566789999976542211 1122348999999
Q ss_pred cccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCCccHHHH
Q 013019 356 TKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAA 396 (451)
Q Consensus 356 SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ls~~~a 396 (451)
||.-| |...+.||.+. ++++.+++..+...-..+++-..+
T Consensus 193 SK~TG-HAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQ 233 (363)
T PF04864_consen 193 SKLTG-HAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQ 233 (363)
T ss_dssp HHHCS--GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHH
T ss_pred ecccC-ccccccceeeecCHHHHHHHHHHHHHhcccCcHHHH
Confidence 99764 54456666555 556778887766554444554443
No 384
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.82 E-value=0.00027 Score=76.05 Aligned_cols=215 Identities=19% Similarity=0.189 Sum_probs=135.3
Q ss_pred HHHHHHHHHhhhCCCcEEEe-CCHHHHHH---HHHHHHc-cCCC----eEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 212 TVVVEEKMSALEGAESTVIM-ASGMSAST---VMLLALV-PAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 212 ~~~Lee~LA~l~gae~~vv~-sSG~aAi~---~al~all-~~GD----~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
...||+.|.++.|-+..-+. +||.+.-+ .++++.+ ..|+ .-+++-..||.... .+...|.++..++.
T Consensus 584 f~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA----SA~MagmkvvpV~~ 659 (1001)
T KOG2040|consen 584 FTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA----SAAMAGMKVVPVGC 659 (1001)
T ss_pred HHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh----hHHhcCCEEEEeec
Confidence 45688888988887665544 57775433 3444443 3443 36777778887653 23455777766653
Q ss_pred -----CCHHHHHHhhcCC--CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCC--CCccccccCCCcEEEE
Q 013019 283 -----ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT--PLNQKALSLGADLVLH 353 (451)
Q Consensus 283 -----~D~d~Le~ai~~~--~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~--~~~~~pl~~GaDiVv~ 353 (451)
.|..+|++..+++ +..++.+..|+..----.++++++++.|+||--|..|.+-.. --..+|.++|+|+.--
T Consensus 660 ~~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~HL 739 (1001)
T KOG2040|consen 660 DANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCHL 739 (1001)
T ss_pred cCCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceecccCCccccccceee
Confidence 3777887766543 467888888984322334799999999999999999998322 2356888999999988
Q ss_pred CCcccCCcc-c--cceeEEEEeCHHHHHHHHHHh----------H--------hhCCC--ccHHHHHHHHHhhHHHHHHH
Q 013019 354 SATKFIGGH-N--DVLAGSISGSGKLVTQIRNLH----------H--------VLGGA--LNPNAAYLIIRGMKTLHLRV 410 (451)
Q Consensus 354 S~SK~l~G~-g--dv~gG~Iv~~~eli~~lr~~~----------~--------~~G~~--ls~~~a~l~lrgL~tl~~Rl 410 (451)
-++|.|+-+ | .-.+|-|..++.+..-+-..- . .+|.. +..--+|.-+.|.+.|..--
T Consensus 740 NLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as 819 (1001)
T KOG2040|consen 740 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDAS 819 (1001)
T ss_pred cccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhh
Confidence 999998722 1 122344444444332221100 0 12211 11122555555666665555
Q ss_pred HHHHHHHHHHHHHHHcCCCe
Q 013019 411 QQQNSTALRMAEILEAHPKV 430 (451)
Q Consensus 411 ~~~~~nA~~Lae~L~~~p~V 430 (451)
+...-||..+++.|+.|=++
T Consensus 820 ~~AiLNaNYMakRLe~hYki 839 (1001)
T KOG2040|consen 820 KIAILNANYMAKRLESHYKI 839 (1001)
T ss_pred HHHhhhhHHHHHHHhhccce
Confidence 56667899999999998544
No 385
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.73 E-value=0.00012 Score=78.75 Aligned_cols=137 Identities=20% Similarity=0.351 Sum_probs=99.6
Q ss_pred HHHHHhhhCC--CcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhh
Q 013019 216 EEKMSALEGA--ESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAAL 292 (451)
Q Consensus 216 ee~LA~l~ga--e~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai 292 (451)
+..++++.|- ..+-++--|++|-.++.++. ..++.++++...+|+.|...++.....+|+++...| +++... .
T Consensus 169 QTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~---~~~~~~-s 244 (1001)
T KOG2040|consen 169 QTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD---IKEADY-S 244 (1001)
T ss_pred HHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEecC---HHHhhc-c
Confidence 5567788775 45666777886555544433 455678999999999999988877888888866544 333322 2
Q ss_pred cCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCC-CCCCccccccCCCcEEEECCccc
Q 013019 293 NNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKF 358 (451)
Q Consensus 293 ~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tf-a~~~~~~pl~~GaDiVv~S~SK~ 358 (451)
.+ ++..|++..|. --|.+.|.+++++.+++.|.++++-.-. +--++..|.++|+||++.|...+
T Consensus 245 ~~-~v~gvlvQYP~-t~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRF 309 (1001)
T KOG2040|consen 245 SK-DVSGVLVQYPD-TEGSVLDFDELVELAHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRF 309 (1001)
T ss_pred cc-ceeEEEEEcCC-CCCcccCHHHHHHHhhccCceEEEeehhhHHHccCChhhcCceeeecccccc
Confidence 23 38899998887 4799999999999999999886654332 22355678899999999997664
No 386
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.71 E-value=0.0021 Score=65.44 Aligned_cols=212 Identities=22% Similarity=0.236 Sum_probs=127.0
Q ss_pred ccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCC-----CeEEEcCCCCcchHHHHHHhhhcCCcE
Q 013019 202 FEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAG-----GHIVTTTDCYRKTRIFIETVLPKMGIT 276 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~G-----D~VIv~~~~Y~~t~~~l~~~l~~~Gi~ 276 (451)
-.|+ ++.....|++.+.+.+|-+..+-+.-|-.|-...+..++++| .+.++..+.|..|-+.- .+..|..
T Consensus 73 EAYa--gsrs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h---~~~ng~~ 147 (471)
T COG3033 73 EAYA--GSRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGH---IQINGAT 147 (471)
T ss_pred hhhc--ccccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHH---HHhcCCc
Confidence 3566 566778899999999998888888788877777777676655 45555666665543321 1122221
Q ss_pred EEE--eC-------------CCCHHHHHHhhcC---CCeEEEEEeCCCCC-ccccc---cHHHHHHHHHhcCCEEEEecC
Q 013019 277 ATV--ID-------------PADMEGLEAALNN---NNVSLFFTESPTNP-FLRCV---DVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 277 v~~--vd-------------~~D~d~Le~ai~~---~~tklV~lesPsNP-tG~v~---DL~~IaelA~~~g~~lVVD~t 334 (451)
..- +| -.|++.|++.|++ +++-.|++.-.+|- .|... +++++.+||++++++++.|.+
T Consensus 148 ~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~ 227 (471)
T COG3033 148 PRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAA 227 (471)
T ss_pred cccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehh
Confidence 111 11 1378889888874 23556666444444 34443 588999999999999999998
Q ss_pred -CCC---CCccc---------------cccCCCcEEEECCcccCCccccceeEEEEeCHH----HHHHHHHHhH------
Q 013019 335 -FAT---PLNQK---------------ALSLGADLVLHSATKFIGGHNDVLAGSISGSGK----LVTQIRNLHH------ 385 (451)
Q Consensus 335 -fa~---~~~~~---------------pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~e----li~~lr~~~~------ 385 (451)
|+. .+.++ .+. .+|-.+-|.-|---.. +||+++.+++ +...++...-
T Consensus 228 RfaENaYFIk~rE~gYrd~sI~~IarEm~s-YaD~~~mS~KKD~lvn---mGGfl~~~D~~~fDvy~~~~~~~V~~eG~~ 303 (471)
T COG3033 228 RFAENAYFIKQREPGYRDWSIEEIAREMYS-YADGCTMSAKKDGLVN---MGGFLCFKDDSFFDVYEECRTLVVVQEGFP 303 (471)
T ss_pred hhhhhhhhhhhcCcccccccHHHHHHHHHh-hhhhheeeccccceec---cccEEEecCccHHHHHHHHHhheEeecccc
Confidence 332 11111 112 3677788887753222 6899988765 5555554321
Q ss_pred hhCCCccHHHHHHHHHhhH------HHHHHHHHHHHHHHHHHHHHHcC
Q 013019 386 VLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 386 ~~G~~ls~~~a~l~lrgL~------tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
.+| .++.-+...+..||. .+..|++ ..+.|++.|++.
T Consensus 304 tYG-gl~GrdmealAvGL~e~~~~~yl~~Rv~----Qv~YL~~~l~~~ 346 (471)
T COG3033 304 TYG-GLAGRDMEALAVGLREGVNFDYLAHRVA----QVQYLADGLEEA 346 (471)
T ss_pred ccC-cccchhHHHHHHHHHHhcCcHHHHHHHH----HHHHHHHHHHhc
Confidence 223 233333222233443 3444444 467788888775
No 387
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.33 E-value=0.0036 Score=62.55 Aligned_cols=160 Identities=16% Similarity=0.217 Sum_probs=112.1
Q ss_pred HHHHHHhhhCC-C-cEEEeCCHHHHHHHHHHHHccCCC---eEEEcCCCCcchHHHHHHhhhcCCcEEE----EeCC---
Q 013019 215 VEEKMSALEGA-E-STVIMASGMSASTVMLLALVPAGG---HIVTTTDCYRKTRIFIETVLPKMGITAT----VIDP--- 282 (451)
Q Consensus 215 Lee~LA~l~ga-e-~~vv~sSG~aAi~~al~all~~GD---~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~----~vd~--- 282 (451)
.-..++.+.|+ + +.-+++|=+.-+..++.++.+|-. +|+...-.|++-+-.++.-++..|+.+. .+++
T Consensus 116 il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREG 195 (465)
T KOG3846|consen 116 ILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREG 195 (465)
T ss_pred hhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEeccccc
Confidence 45667778887 3 344455555666677777877753 5999988898876666666666666432 2222
Q ss_pred ---CCHHHHHHhhcCC--CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEEECCc
Q 013019 283 ---ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSAT 356 (451)
Q Consensus 283 ---~D~d~Le~ai~~~--~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv~S~S 356 (451)
...+++.+.|+++ .+.+|++...+-.||...|+.+|...-+..|+++-.|=+++.+ +...-.++|+|+.+...-
T Consensus 196 EetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSY 275 (465)
T KOG3846|consen 196 EETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSY 275 (465)
T ss_pred ccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEeee
Confidence 1244555555432 3788999888899999999999997667789999999987754 333445789999999999
Q ss_pred ccCCccccceeEEEEeCH
Q 013019 357 KFIGGHNDVLAGSISGSG 374 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~~ 374 (451)
||++....-+||..+-.+
T Consensus 276 KYlnaGaGgIgGlFvHek 293 (465)
T KOG3846|consen 276 KYLNAGAGGIGGLFVHEK 293 (465)
T ss_pred cccccCCCccceeeeehh
Confidence 999855445677766443
No 388
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.01 E-value=0.0048 Score=61.48 Aligned_cols=200 Identities=17% Similarity=0.224 Sum_probs=110.7
Q ss_pred HHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH---ccCCCeEEEcCCCCcchHHHHHHh----hhc-CCc-EEEEe---CC
Q 013019 215 VEEKMSALEGAESTVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETV----LPK-MGI-TATVI---DP 282 (451)
Q Consensus 215 Lee~LA~l~gae~~vv~sSG~aAi~~al~al---l~~GD~VIv~~~~Y~~t~~~l~~~----l~~-~Gi-~v~~v---d~ 282 (451)
.+...+.+-+-.-+++++||++|+.++|+.. .+..| +|+-+..|.+.....-++ +.. -++ +.+++ +.
T Consensus 92 A~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftkhqD-vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPc 170 (452)
T KOG1403|consen 92 ARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTKHQD-VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPC 170 (452)
T ss_pred HHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcccCc-eEEEechhccceeeeeeccceeccCCCCcCCCceeEecCC
Confidence 3444444444566788899999999988743 33344 555566666532211011 000 011 11111 11
Q ss_pred ---------------CC-----HHHHHHhhcC-----CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEec
Q 013019 283 ---------------AD-----MEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDG 333 (451)
Q Consensus 283 ---------------~D-----~d~Le~ai~~-----~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~ 333 (451)
.| .+.+++.+++ ..+.+.+.|+-.+=-|.+++ .+++++..|.+|-+.|.||
T Consensus 171 PDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDE 250 (452)
T KOG1403|consen 171 PDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADE 250 (452)
T ss_pred ccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeeh
Confidence 01 2344444432 13555666776666677765 5788888999999999999
Q ss_pred CCCCC-------CccccccCCCcEEEECCcccCC-ccccceeEEEEeCHHHHHHHHH----HhHhhCCCccHHHHHHHHH
Q 013019 334 TFATP-------LNQKALSLGADLVLHSATKFIG-GHNDVLAGSISGSGKLVTQIRN----LHHVLGGALNPNAAYLIIR 401 (451)
Q Consensus 334 tfa~~-------~~~~pl~~GaDiVv~S~SK~l~-G~gdv~gG~Iv~~~eli~~lr~----~~~~~G~~ls~~~a~l~lr 401 (451)
....+ +.......-.|||. +.|-+| ||. .+.+++.+++.+.+.. +.+.+|+ +|..+...+.
T Consensus 251 VQvGFGRvG~hyWafq~y~fiPDIVt--mgKpmGNGhP---Va~VattkeIA~Af~atgv~YFNTyGG--nPVsCAv~la 323 (452)
T KOG1403|consen 251 VQVGFGRVGSHYWAFQTYNFIPDIVT--MGKPMGNGHP---VAAVATTKEIAQAFHATGVEYFNTYGG--NPVSCAVGLA 323 (452)
T ss_pred hhhcccccchhhhhhhhhccccchhe--ecccCCCCCe---eeEEeccHHHHHHhccccceehhccCC--CchhHHHHHH
Confidence 84321 22222233357776 788887 554 7888888888887664 2234444 4565555444
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 013019 402 GMKTLHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 402 gL~tl~~Rl~~~~~nA~~Lae~L 424 (451)
-|+.+. -+...++++++-++|
T Consensus 324 Vm~v~e--~E~Lq~ha~~vG~~L 344 (452)
T KOG1403|consen 324 VMRVCE--DENLQEHAQQVGEKL 344 (452)
T ss_pred HHHHHh--hhhHHHHHHHHHHHH
Confidence 444332 133444555554444
No 389
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=96.91 E-value=0.053 Score=54.52 Aligned_cols=150 Identities=17% Similarity=0.184 Sum_probs=90.0
Q ss_pred EEEeCCHHHHHHHHHH--HHccCCCeEEEcCCCCcchHHHHHHhhhcCCc----EEEEeCC----CCHHHHHHhhcCCCe
Q 013019 228 TVIMASGMSASTVMLL--ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI----TATVIDP----ADMEGLEAALNNNNV 297 (451)
Q Consensus 228 ~vv~sSG~aAi~~al~--all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi----~v~~vd~----~D~d~Le~ai~~~~t 297 (451)
.+-.-||+.|+..... +-.-....|.++.|.|.....++ +..|. ...+.|. .|++.+...|+..+.
T Consensus 102 ~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if----~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe 177 (410)
T KOG1412|consen 102 GVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIF----EKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPE 177 (410)
T ss_pred ceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHH----HHcCCceeeeeeeecCCCceecHHHHHHHHhhCCC
Confidence 3445578877765532 22223557999999998876544 44452 2333442 367766666653222
Q ss_pred -EEEEEeC-CCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcccc----------ccCCC-cEEEECCcccCCc
Q 013019 298 -SLFFTES-PTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA----------LSLGA-DLVLHSATKFIGG 361 (451)
Q Consensus 298 -klV~les-PsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~p----------l~~Ga-DiVv~S~SK~l~G 361 (451)
.++++.. -+||||.-.. ...|++..++++...+.|-+|-.....++ .+.|. -+|+.||+|-+|.
T Consensus 178 ~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGl 257 (410)
T KOG1412|consen 178 GSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGL 257 (410)
T ss_pred CcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhccc
Confidence 3444433 3799997543 56788888889999999999633221111 12233 2788999999998
Q ss_pred cccceeEE--EEeCHHHHHHHH
Q 013019 362 HNDVLAGS--ISGSGKLVTQIR 381 (451)
Q Consensus 362 ~gdv~gG~--Iv~~~eli~~lr 381 (451)
.+++.|-+ ++-++..+..+.
T Consensus 258 YneRvGnltvv~~n~a~i~~v~ 279 (410)
T KOG1412|consen 258 YNERVGNLTVVVNNPAVIAGVK 279 (410)
T ss_pred ccccccceEEEecChhHHHHHH
Confidence 87655433 333455554443
No 390
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=96.72 E-value=0.058 Score=54.89 Aligned_cols=195 Identities=15% Similarity=0.195 Sum_probs=107.7
Q ss_pred CccCCHHHHHHHHhcccCCccccCC-CchhHHHHHHHHHhhhCC----CcEEE---eCCHHHH--HHHHHHHHccCCCeE
Q 013019 183 YFFKKTAELIDFKEKRRASFEYGRY-GNPTTVVVEEKMSALEGA----ESTVI---MASGMSA--STVMLLALVPAGGHI 252 (451)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~Y~R~-~npt~~~Lee~LA~l~ga----e~~vv---~sSG~aA--i~~al~all~~GD~V 252 (451)
|+++...+.+....+....-.|--. |-|....+..+|+-=.+. +.-++ +-||+.| +.+-+++..-++..|
T Consensus 70 ~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I 149 (427)
T KOG1411|consen 70 YVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDI 149 (427)
T ss_pred eeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccce
Confidence 5566665544433333333355433 334444444444321221 22222 2366644 455566666778999
Q ss_pred EEcCCCCcchHHHHHHhhhcCCcEEEE---eCC----CCHHHHHHhhcCC--CeEEEEEeCCCCCcccccc---HHHHHH
Q 013019 253 VTTTDCYRKTRIFIETVLPKMGITATV---IDP----ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSD 320 (451)
Q Consensus 253 Iv~~~~Y~~t~~~l~~~l~~~Gi~v~~---vd~----~D~d~Le~ai~~~--~tklV~lesPsNPtG~v~D---L~~Iae 320 (451)
.+++|.|+.... ++...|+.+.+ .|. .|.+.+.+.+.+. .--+++-..-+||||.-.. .++|.+
T Consensus 150 ~ip~PTWgNh~~----if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~ 225 (427)
T KOG1411|consen 150 YIPDPTWGNHKN----IFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISD 225 (427)
T ss_pred eecCCcccccCc----cccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHH
Confidence 999999998653 34455666544 332 2544433334321 1223333346799996543 678888
Q ss_pred HHHhcCCEEEEecCCCCCCcccc----------ccCCCc-EEEECCcccCCccccceeEE--EEeCHHHHHHHH
Q 013019 321 LCHKKGAIVCIDGTFATPLNQKA----------LSLGAD-LVLHSATKFIGGHNDVLAGS--ISGSGKLVTQIR 381 (451)
Q Consensus 321 lA~~~g~~lVVD~tfa~~~~~~p----------l~~GaD-iVv~S~SK~l~G~gdv~gG~--Iv~~~eli~~lr 381 (451)
+.++.+.+-++|-+|..+...+. ++.|.. +++.|+.|-+|..|.+.|.+ ++.+.+...++.
T Consensus 226 ~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~ 299 (427)
T KOG1411|consen 226 LIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVE 299 (427)
T ss_pred HhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHH
Confidence 89999999999999654322211 122333 67789999999877544433 233445544443
No 391
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.06 E-value=0.035 Score=54.57 Aligned_cols=152 Identities=15% Similarity=0.233 Sum_probs=85.8
Q ss_pred CcEEEe--CCHHHHHHHHHHHHcc--C-CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC--------CCHHHHHHhh
Q 013019 226 ESTVIM--ASGMSASTVMLLALVP--A-GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAAL 292 (451)
Q Consensus 226 e~~vv~--sSG~aAi~~al~all~--~-GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--------~D~d~Le~ai 292 (451)
..++++ .+||+ +.+.+..+.. | ...|+-.+-.--+.+.. .-..|.+...++. .|++.+++.+
T Consensus 76 ~nc~vvpl~tgms-lslc~~s~r~krpkakyiiw~ridqks~~ks----i~~agfepiiie~i~d~d~l~tdleav~~~i 150 (432)
T KOG3843|consen 76 ANCFVVPLATGMS-LSLCFLSLRHKRPKAKYIIWLRIDQKSCFKS----IIHAGFEPIIIENILDGDELITDLEAVEAII 150 (432)
T ss_pred hceeEEecccccc-HHHHHHHHhhcCCcccEEEEEecchHHHHHH----HHhcCCCceeeeccccchHHHHhHHHHHHHH
Confidence 556554 57773 4444545432 2 34465554333332221 1123555444432 3677888777
Q ss_pred cCCCeE-EEEE-eCCCCCccccc-cHHHHHHHHHhcCCEEEEecCCCCCCc------cccccCC-CcEEEECCcccCCcc
Q 013019 293 NNNNVS-LFFT-ESPTNPFLRCV-DVKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLG-ADLVLHSATKFIGGH 362 (451)
Q Consensus 293 ~~~~tk-lV~l-esPsNPtG~v~-DL~~IaelA~~~g~~lVVD~tfa~~~~------~~pl~~G-aDiVv~S~SK~l~G~ 362 (451)
++.... .+.+ .+.+.-.-+.. .+++|+.+|..|+++-+|.|+|+--.. +...+.| .|.++.|+-|-|.-+
T Consensus 151 ee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~grida~vqsldknf~vp 230 (432)
T KOG3843|consen 151 EELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVP 230 (432)
T ss_pred HHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceee
Confidence 653223 2222 22222222333 499999999999999999999874211 1112223 588999999999877
Q ss_pred ccceeEEEEe--CHHHHHHHHHHhH
Q 013019 363 NDVLAGSISG--SGKLVTQIRNLHH 385 (451)
Q Consensus 363 gdv~gG~Iv~--~~eli~~lr~~~~ 385 (451)
.||.++. ++.+++.+.+...
T Consensus 231 ---vggaiia~fk~n~iq~iak~yp 252 (432)
T KOG3843|consen 231 ---VGGAIIAAFKDNFIQEIAKMYP 252 (432)
T ss_pred ---cchhHhhHhHHHHHHHHHHhCC
Confidence 3676664 4567777665543
No 392
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.06 E-value=0.017 Score=52.54 Aligned_cols=50 Identities=16% Similarity=0.355 Sum_probs=36.5
Q ss_pred HHHHHHHHHhhhC--C----CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcc
Q 013019 212 TVVVEEKMSALEG--A----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRK 261 (451)
Q Consensus 212 ~~~Lee~LA~l~g--a----e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~ 261 (451)
++++.+.+.+..| . ++.++++++++|+..++.+++.+||.|++++|.|++
T Consensus 98 R~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 98 RKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 4455555555545 1 344445555599999999999999999999999974
No 393
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=95.68 E-value=0.18 Score=51.65 Aligned_cols=201 Identities=13% Similarity=0.131 Sum_probs=110.1
Q ss_pred HHHHHHHHHhhhCCC---cEEEeCCHH-HHHHHHHHHHccCCCe--EEEcCCCCcchHHHHHHhhhcCCcEEEEeC----
Q 013019 212 TVVVEEKMSALEGAE---STVIMASGM-SASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVLPKMGITATVID---- 281 (451)
Q Consensus 212 ~~~Lee~LA~l~gae---~~vv~sSG~-aAi~~al~all~~GD~--VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd---- 281 (451)
..+.|+.+.++++.+ ..+++..|. .....+.+.|+..+.. |.. ..|...- + ...+.++.+....+
T Consensus 52 ~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~--g~Ws~~a--~-~eA~~~~~~~~~~~~~~~ 126 (365)
T COG1932 52 LEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDT--GAWSEFA--I-KEAKKVGKQPKLIDARIE 126 (365)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEee--eehhHhH--H-HHHHHhccccccccccee
Confidence 456788889999863 344444444 6777777888765542 433 2233211 1 12233332111111
Q ss_pred ------CCCHHHHHHhhcCCCeEEEEEeCCCCC-cccccc-HHHHHHHHHhcCCEEEEecCCCCCCccccccC-CCcEEE
Q 013019 282 ------PADMEGLEAALNNNNVSLFFTESPTNP-FLRCVD-VKLVSDLCHKKGAIVCIDGTFATPLNQKALSL-GADLVL 352 (451)
Q Consensus 282 ------~~D~d~Le~ai~~~~tklV~lesPsNP-tG~v~D-L~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~-GaDiVv 352 (451)
..+++.+. +.++ ...|+++ +|+- +|.-.+ ...+. . +.++|+|.+-. .+.++++. .-|++.
T Consensus 127 ~~~~~~iP~~~~~~--~~~~-~ayv~~~-~NeTi~Gv~v~~~p~~~---~--~~~~v~D~SS~--ilsr~iDvsk~dviy 195 (365)
T COG1932 127 EAGYGSIPDLSKWD--FSDN-DAYVHFC-WNETISGVEVPELPDIG---S--DGLLVADASSA--ILSRPIDVSKYDVIY 195 (365)
T ss_pred ccCccCCCChhhcc--cCCC-ccEEEEe-cCCcccceEccCCCCCC---C--CceEEEecccH--HhcCCCChhHcceEE
Confidence 12333332 3332 3335543 3322 243222 22221 1 27899998732 22233332 358999
Q ss_pred ECCcccCCccccceeEEEEeCHHHHHHHHHH-h----H--------hhCCCccHHHHHHHHHhhHHHH------HHHHHH
Q 013019 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNL-H----H--------VLGGALNPNAAYLIIRGMKTLH------LRVQQQ 413 (451)
Q Consensus 353 ~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~-~----~--------~~G~~ls~~~a~l~lrgL~tl~------~Rl~~~ 413 (451)
.+..|-+|+.| .++++.++++++++... . + .+-.+++.+.-++....++++. .-.++.
T Consensus 196 agaQKnlGpaG---ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn 272 (365)
T COG1932 196 AGAQKNLGPAG---LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARN 272 (365)
T ss_pred EehhhccCccc---eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99999999887 78899999999887653 1 0 1112344444455555555543 334566
Q ss_pred HHHHHHHHHHHHcCCCeE
Q 013019 414 NSTALRMAEILEAHPKVL 431 (451)
Q Consensus 414 ~~nA~~Lae~L~~~p~V~ 431 (451)
.++++.|.+++.+.+..+
T Consensus 273 ~~ka~~LY~~id~s~fy~ 290 (365)
T COG1932 273 QAKAQLLYDWIDKSDFYR 290 (365)
T ss_pred HHHHHHHHHHHHhCCccc
Confidence 688999999999886543
No 394
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=90.72 E-value=3.2 Score=42.82 Aligned_cols=74 Identities=15% Similarity=0.123 Sum_probs=49.5
Q ss_pred HHHHHHhhcC-----CCeEEEEEeCCCCCccccc----cHHHHHHHHHhcCCEEEEecCCCC----C--Cccc--cccCC
Q 013019 285 MEGLEAALNN-----NNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFAT----P--LNQK--ALSLG 347 (451)
Q Consensus 285 ~d~Le~ai~~-----~~tklV~lesPsNPtG~v~----DL~~IaelA~~~g~~lVVD~tfa~----~--~~~~--pl~~G 347 (451)
++++|+.|.+ .++.+|++|-..+.-|.-. =++.|.+++++||+.+||||++-. + +... .++.-
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 5566666642 2478999998887766543 278999999999999999998522 2 1111 12234
Q ss_pred CcEEEECCcccCC
Q 013019 348 ADLVLHSATKFIG 360 (451)
Q Consensus 348 aDiVv~S~SK~l~ 360 (451)
.|+|. |||-+-
T Consensus 335 pD~vT--FSKK~q 345 (484)
T KOG1405|consen 335 PDVVT--FSKKFQ 345 (484)
T ss_pred cccee--hhhhhh
Confidence 67776 667654
No 395
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=89.11 E-value=1.2 Score=37.79 Aligned_cols=89 Identities=18% Similarity=0.238 Sum_probs=61.4
Q ss_pred HHHHHHhhhcCCcEEEEeCCC-CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc--CCEEEEecCCCCCC
Q 013019 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPL 339 (451)
Q Consensus 263 ~~~l~~~l~~~Gi~v~~vd~~-D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~--g~~lVVD~tfa~~~ 339 (451)
...+...+++.|.++.++|.. +.+++.+.+.+.++++|.+.... +.......++++..++. ++.+++=+.+.+..
T Consensus 17 l~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~t~~ 94 (121)
T PF02310_consen 17 LLYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVVGGPHATAD 94 (121)
T ss_dssp HHHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEEEESSSGHH
T ss_pred HHHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEEECCchhcC
Confidence 344556788889999988765 46778777765568888885443 33444567788877776 78999988876654
Q ss_pred cccccc--CCCcEEEE
Q 013019 340 NQKALS--LGADLVLH 353 (451)
Q Consensus 340 ~~~pl~--~GaDiVv~ 353 (451)
....++ .|+|.++.
T Consensus 95 ~~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 95 PEEILREYPGIDYVVR 110 (121)
T ss_dssp HHHHHHHHHTSEEEEE
T ss_pred hHHHhccCcCcceecC
Confidence 444443 57887774
No 396
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=83.87 E-value=6.8 Score=33.38 Aligned_cols=91 Identities=13% Similarity=0.076 Sum_probs=57.7
Q ss_pred HHHHHHhhhcCCcEEEEeCC-CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc---CCEEEEecCCCCC
Q 013019 263 RIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDGTFATP 338 (451)
Q Consensus 263 ~~~l~~~l~~~Gi~v~~vd~-~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~---g~~lVVD~tfa~~ 338 (451)
..++...++..|.++.+... ..++++.+.+.+.++.+|.++.-. +....++.++.+.+++. ++.+++=......
T Consensus 16 ~~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~--~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~ 93 (119)
T cd02067 16 KNIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTR 93 (119)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHHcCCCCCeEEEECCCCCh
Confidence 34556678888999877653 346677666665568888885432 23445677888888775 4666666654433
Q ss_pred CccccccCCCcEEEECC
Q 013019 339 LNQKALSLGADLVLHSA 355 (451)
Q Consensus 339 ~~~~pl~~GaDiVv~S~ 355 (451)
........|+|.+++..
T Consensus 94 ~~~~~~~~G~D~~~~~~ 110 (119)
T cd02067 94 DFKFLKEIGVDAYFGPA 110 (119)
T ss_pred hHHHHHHcCCeEEECCH
Confidence 22234456888887643
No 397
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=82.35 E-value=6.5 Score=37.27 Aligned_cols=92 Identities=23% Similarity=0.222 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHHccCCCeEEE-cCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 233 SGMSASTVMLLALVPAGGHIVT-TTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 233 SG~aAi~~al~all~~GD~VIv-~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|..+- .++.+|++.|-+|.+ .++. ..... ..++..|+++...|..|.+.|.++++. ...|++..+......
T Consensus 7 tG~~G~-~v~~~L~~~~~~V~~l~R~~---~~~~~-~~l~~~g~~vv~~d~~~~~~l~~al~g--~d~v~~~~~~~~~~~ 79 (233)
T PF05368_consen 7 TGNQGR-SVVRALLSAGFSVRALVRDP---SSDRA-QQLQALGAEVVEADYDDPESLVAALKG--VDAVFSVTPPSHPSE 79 (233)
T ss_dssp TSHHHH-HHHHHHHHTTGCEEEEESSS---HHHHH-HHHHHTTTEEEES-TT-HHHHHHHHTT--CSEEEEESSCSCCCH
T ss_pred ccHHHH-HHHHHHHhCCCCcEEEEecc---chhhh-hhhhcccceEeecccCCHHHHHHHHcC--CceEEeecCcchhhh
Confidence 465432 334455556655544 2322 21222 335567999888899999999999975 566777677544333
Q ss_pred cccHHHHHHHHHhcCCEEEE
Q 013019 312 CVDVKLVSDLCHKKGAIVCI 331 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVV 331 (451)
..-...|++.|++.|+..++
T Consensus 80 ~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 80 LEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHHHHHHHT-SEEE
T ss_pred hhhhhhHHHhhhccccceEE
Confidence 33456789999999987666
No 398
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=78.45 E-value=71 Score=33.00 Aligned_cols=126 Identities=19% Similarity=0.164 Sum_probs=71.6
Q ss_pred EEEeCCHH-HHHHHHHHHHccCC--CeEEEcCCCCcchHHHHHH---hhhcC-CcEEEEeCCCCHHHHHHhhcCCCeEEE
Q 013019 228 TVIMASGM-SASTVMLLALVPAG--GHIVTTTDCYRKTRIFIET---VLPKM-GITATVIDPADMEGLEAALNNNNVSLF 300 (451)
Q Consensus 228 ~vv~sSG~-aAi~~al~all~~G--D~VIv~~~~Y~~t~~~l~~---~l~~~-Gi~v~~vd~~D~d~Le~ai~~~~tklV 300 (451)
.+..+.|+ ..-.--+..|++.| =.+|+-+..|+-....++. +-+.+ +..+.--...+.++.+.+++-. ...|
T Consensus 97 ~~~vsvG~~~~d~er~~~L~~a~~~~d~iviD~AhGhs~~~i~~ik~ir~~~p~~~viaGNV~T~e~a~~Li~aG-AD~i 175 (343)
T TIGR01305 97 NVAVSSGSSDNDLEKMTSILEAVPQLKFICLDVANGYSEHFVEFVKLVREAFPEHTIMAGNVVTGEMVEELILSG-ADIV 175 (343)
T ss_pred eEEEEeccCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHhhCCCCeEEEecccCHHHHHHHHHcC-CCEE
Confidence 34446666 34444455666654 4466667778765444432 22223 3333322345778888877653 5666
Q ss_pred EEe-CC-CCCccccc------c---HHHHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEEEC
Q 013019 301 FTE-SP-TNPFLRCV------D---VKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHS 354 (451)
Q Consensus 301 ~le-sP-sNPtG~v~------D---L~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv~S 354 (451)
.+. -| +|-+++.. - +.++++.++++++.+|.|.-.-.+ -..+.+.+|||.|+-.
T Consensus 176 kVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~~v~VIaDGGIr~~gDI~KALA~GAd~VMlG 241 (343)
T TIGR01305 176 KVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLG 241 (343)
T ss_pred EEcccCCCcccCceeCCCCcCHHHHHHHHHHHhccCCCeEEEcCCcCchhHHHHHHHcCCCEEEEC
Confidence 553 12 22233332 2 445555566678999999865432 3456788999988854
No 399
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=78.33 E-value=9.8 Score=36.28 Aligned_cols=125 Identities=16% Similarity=0.141 Sum_probs=73.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH--HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc--EEEEeCCC
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPA 283 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~--aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi--~v~~vd~~ 283 (451)
-.|...+|-+.|+++.++..++=++++. +++..+ ..++++.+|++.+..- ......+..+++.|. .++++..+
T Consensus 29 i~~~~g~lL~~l~~~~~~k~vLEIGt~~GySal~la--~~l~~~g~i~tiE~~~-~~~~~A~~~~~~ag~~~~I~~~~gd 105 (205)
T PF01596_consen 29 ISPETGQLLQMLVRLTRPKRVLEIGTFTGYSALWLA--EALPEDGKITTIEIDP-ERAEIARENFRKAGLDDRIEVIEGD 105 (205)
T ss_dssp HHHHHHHHHHHHHHHHT-SEEEEESTTTSHHHHHHH--HTSTTTSEEEEEESSH-HHHHHHHHHHHHTTGGGGEEEEES-
T ss_pred cCHHHHHHHHHHHHhcCCceEEEeccccccHHHHHH--HhhcccceEEEecCcH-HHHHHHHHHHHhcCCCCcEEEEEec
Confidence 3466667778888899988888877655 555443 2345666877776533 234444455666554 34444433
Q ss_pred CHHHHHHhhcCC---CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC
Q 013019 284 DMEGLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 338 (451)
Q Consensus 284 D~d~Le~ai~~~---~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~ 338 (451)
-.+-|.+...+. +-.+||+... .......++.+.++.+ .|.++|+||++..+
T Consensus 106 a~~~l~~l~~~~~~~~fD~VFiDa~--K~~y~~y~~~~~~ll~-~ggvii~DN~l~~G 160 (205)
T PF01596_consen 106 ALEVLPELANDGEEGQFDFVFIDAD--KRNYLEYFEKALPLLR-PGGVIIADNVLWRG 160 (205)
T ss_dssp HHHHHHHHHHTTTTTSEEEEEEEST--GGGHHHHHHHHHHHEE-EEEEEEEETTTGGG
T ss_pred cHhhHHHHHhccCCCceeEEEEccc--ccchhhHHHHHhhhcc-CCeEEEEccccccc
Confidence 234455444322 3789999753 2223333555555444 57789999996433
No 400
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=76.63 E-value=31 Score=33.89 Aligned_cols=124 Identities=15% Similarity=0.142 Sum_probs=72.8
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHH--HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc--EEEEeCCCC
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPAD 284 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~--aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi--~v~~vd~~D 284 (451)
.|....|-..+++..++..++=+++++ +++..+ ..++++.+|++.+..- ......+..+...|+ .++++...-
T Consensus 64 ~~~~g~lL~~l~~~~~ak~iLEiGT~~GySal~la--~al~~~g~v~tiE~~~-~~~~~Ar~~~~~ag~~~~I~~~~G~a 140 (247)
T PLN02589 64 SADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATA--LALPEDGKILAMDINR-ENYELGLPVIQKAGVAHKIDFREGPA 140 (247)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEEeChhhHHHHHHH--hhCCCCCEEEEEeCCH-HHHHHHHHHHHHCCCCCceEEEeccH
Confidence 466677888888888888877776555 555433 2245666888776542 233444445555564 344443332
Q ss_pred HHHHHHhhcC----CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC
Q 013019 285 MEGLEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 338 (451)
Q Consensus 285 ~d~Le~ai~~----~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~ 338 (451)
.+-|.+.... ..-.+||+. .+.......++.+.++.+ .|.++|+||++..+
T Consensus 141 ~e~L~~l~~~~~~~~~fD~iFiD--adK~~Y~~y~~~~l~ll~-~GGviv~DNvl~~G 195 (247)
T PLN02589 141 LPVLDQMIEDGKYHGTFDFIFVD--ADKDNYINYHKRLIDLVK-VGGVIGYDNTLWNG 195 (247)
T ss_pred HHHHHHHHhccccCCcccEEEec--CCHHHhHHHHHHHHHhcC-CCeEEEEcCCCCCC
Confidence 3444443321 247899996 334444445566666555 46779999996543
No 401
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=73.43 E-value=69 Score=31.31 Aligned_cols=121 Identities=18% Similarity=0.220 Sum_probs=75.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeC--CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc--EEEEeCCC
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMA--SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPA 283 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~s--SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi--~v~~vd~~ 283 (451)
..|..-.|-+.+-++.++..++-++ +|.+|+..++ .++++.+|+..+-.... +.....+.+..|+ +++++...
T Consensus 57 v~~d~g~fl~~li~~~~ak~~lelGvfTGySaL~~Al--alp~dGrv~a~eid~~~-~~~~~~~~k~agv~~KI~~i~g~ 133 (237)
T KOG1663|consen 57 VGPDKGQFLQMLIRLLNAKRTLELGVFTGYSALAVAL--ALPEDGRVVAIEIDADA-YEIGLELVKLAGVDHKITFIEGP 133 (237)
T ss_pred cChHHHHHHHHHHHHhCCceEEEEecccCHHHHHHHH--hcCCCceEEEEecChHH-HHHhHHHHHhccccceeeeeecc
Confidence 5677778889999999998877654 5667776654 35667788776644333 2222233334443 46666555
Q ss_pred CHHHHHHhhcC---CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC
Q 013019 284 DMEGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 284 D~d~Le~ai~~---~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t 334 (451)
-.+.|.+.+.+ ..-.++|+..== .-.....+++..+.+ .|.++++||+
T Consensus 134 a~esLd~l~~~~~~~tfDfaFvDadK--~nY~~y~e~~l~Llr-~GGvi~~DNv 184 (237)
T KOG1663|consen 134 ALESLDELLADGESGTFDFAFVDADK--DNYSNYYERLLRLLR-VGGVIVVDNV 184 (237)
T ss_pred hhhhHHHHHhcCCCCceeEEEEccch--HHHHHHHHHHHhhcc-cccEEEEecc
Confidence 56666666654 235678874311 112234677777776 4788999997
No 402
>PLN02476 O-methyltransferase
Probab=73.14 E-value=28 Score=34.83 Aligned_cols=124 Identities=15% Similarity=0.225 Sum_probs=71.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH--HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE--EEEeCCC
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPA 283 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~--aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~--v~~vd~~ 283 (451)
-.|...+|-..|+++.++...+=+++++ +++..+. .++++.+|+..+..- ......+..+++.|+. ++++..+
T Consensus 102 v~~~~g~lL~~L~~~~~ak~VLEIGT~tGySal~lA~--al~~~G~V~TiE~d~-e~~~~Ar~n~~~aGl~~~I~li~Gd 178 (278)
T PLN02476 102 VSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAVAL--VLPESGCLVACERDS-NSLEVAKRYYELAGVSHKVNVKHGL 178 (278)
T ss_pred cCHHHHHHHHHHHHhcCCCeEEEecCCCCHHHHHHHH--hCCCCCEEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 3577778889999999987776665544 5554432 345566766655332 2344445556667764 4444332
Q ss_pred CHHHHHHhhc---CCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCC
Q 013019 284 DMEGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (451)
Q Consensus 284 D~d~Le~ai~---~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~ 337 (451)
-.+.|.+... ...-.+||+...- .....-++.+.++.+ .|.++|+||+...
T Consensus 179 A~e~L~~l~~~~~~~~FD~VFIDa~K--~~Y~~y~e~~l~lL~-~GGvIV~DNvL~~ 232 (278)
T PLN02476 179 AAESLKSMIQNGEGSSYDFAFVDADK--RMYQDYFELLLQLVR-VGGVIVMDNVLWH 232 (278)
T ss_pred HHHHHHHHHhcccCCCCCEEEECCCH--HHHHHHHHHHHHhcC-CCcEEEEecCccC
Confidence 2344444331 1236899997543 222223445555554 4677899999643
No 403
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=72.89 E-value=21 Score=30.74 Aligned_cols=85 Identities=14% Similarity=0.148 Sum_probs=52.8
Q ss_pred HHHhhhcCCcEEEEeCCCCHHHHHHhhcC-CCeEEEEEeCCCCCccccccHHHHHHHHHhcC--CEEEEecCCCCCCccc
Q 013019 266 IETVLPKMGITATVIDPADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQK 342 (451)
Q Consensus 266 l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~-~~tklV~lesPsNPtG~v~DL~~IaelA~~~g--~~lVVD~tfa~~~~~~ 342 (451)
+...++..|+.+.+.+....+...+.+.. .+.++|.+.. .+.......++++..|+.+ +++++=..+.+.....
T Consensus 8 ~aa~l~~~g~~v~~~~~~~~~~~~~~~~~~~~pdiv~~S~---~~~~~~~~~~~~~~ik~~~p~~~iv~GG~~~t~~p~~ 84 (127)
T cd02068 8 LAAVLEDAGFIVAEHDVLSADDIVEDIKELLKPDVVGISL---MTSAIYEALELAKIAKEVLPNVIVVVGGPHATFFPEE 84 (127)
T ss_pred HHHHHHHCCCeeeecCCCCHHHHHHHHHHhcCCCEEEEee---ccccHHHHHHHHHHHHHHCCCCEEEECCcchhhCHHH
Confidence 34456667888777776655555445543 3478887743 2333346778888888865 8898888776644333
Q ss_pred -cccCCCcEEEE
Q 013019 343 -ALSLGADLVLH 353 (451)
Q Consensus 343 -pl~~GaDiVv~ 353 (451)
....++|+++.
T Consensus 85 ~~~~~~~D~vv~ 96 (127)
T cd02068 85 ILEEPGVDFVVI 96 (127)
T ss_pred HhcCCCCCEEEE
Confidence 12335676663
No 404
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=72.50 E-value=1.2e+02 Score=31.28 Aligned_cols=140 Identities=15% Similarity=0.124 Sum_probs=78.1
Q ss_pred EEEeCCHH-HHHHHHHHHHcc--CCCeEEEcCCCCcchHHHHH---HhhhcC-CcEEEEeCCCCHHHHHHhhcCCCeEEE
Q 013019 228 TVIMASGM-SASTVMLLALVP--AGGHIVTTTDCYRKTRIFIE---TVLPKM-GITATVIDPADMEGLEAALNNNNVSLF 300 (451)
Q Consensus 228 ~vv~sSG~-aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l~---~~l~~~-Gi~v~~vd~~D~d~Le~ai~~~~tklV 300 (451)
.+..+.|. ..-.--+..|+. +|=.+|+-|..|+-....++ .+-+.+ .+.+.--...+.+..+++++.. ...|
T Consensus 98 ~~~vavG~~~~d~er~~~L~~~~~g~D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vIaGNV~T~e~a~~Li~aG-AD~v 176 (346)
T PRK05096 98 HVMVSTGTSDADFEKTKQILALSPALNFICIDVANGYSEHFVQFVAKAREAWPDKTICAGNVVTGEMVEELILSG-ADIV 176 (346)
T ss_pred eEEEEecCCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHcC-CCEE
Confidence 34446666 333344445555 46556677778876544443 222233 2444333445677777777643 3444
Q ss_pred E-------EeCCCCCccccc----cHHHHHHHHHhcCCEEEEecCCCC-CCccccccCCCcEEEECCcccCCccccceeE
Q 013019 301 F-------TESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFIGGHNDVLAG 368 (451)
Q Consensus 301 ~-------lesPsNPtG~v~----DL~~IaelA~~~g~~lVVD~tfa~-~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG 368 (451)
- +|+.--.+|.-. -+.+.++.|+++|+++|.|.-.-. +-..+.+..|+|.|+ +...|+|+-...|-
T Consensus 177 KVGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGGi~~sGDI~KAlaaGAd~VM--lGsllAGt~EsPGe 254 (346)
T PRK05096 177 KVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCTVPGDVAKAFGGGADFVM--LGGMLAGHEESGGE 254 (346)
T ss_pred EEcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCCcccccHHHHHHHcCCCEEE--eChhhcCcccCCCc
Confidence 2 122222333322 356777778899999999986432 334567888999888 44555555433343
Q ss_pred EE
Q 013019 369 SI 370 (451)
Q Consensus 369 ~I 370 (451)
++
T Consensus 255 ~~ 256 (346)
T PRK05096 255 IV 256 (346)
T ss_pred EE
Confidence 43
No 405
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=70.86 E-value=12 Score=40.41 Aligned_cols=85 Identities=18% Similarity=0.174 Sum_probs=57.4
Q ss_pred HHHhhhcCC-cEEEEeCC----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc--CCEEEEecCCCCC
Q 013019 266 IETVLPKMG-ITATVIDP----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATP 338 (451)
Q Consensus 266 l~~~l~~~G-i~v~~vd~----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~--g~~lVVD~tfa~~ 338 (451)
+...++..| .++.++|. .+.+++.+.+.+.++++|.+... |.......++++.+++. ++.+|+=+.+++.
T Consensus 28 lAa~L~~~G~~~V~iiD~~~~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t~ 104 (497)
T TIGR02026 28 IGGALLDAGYHDVTFLDAMTGPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHPTF 104 (497)
T ss_pred HHHHHHhcCCcceEEecccccCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCcCc
Confidence 444566678 68888874 24677777776555788888432 34444567888888886 8999999988776
Q ss_pred Ccccccc--CCCcEEEE
Q 013019 339 LNQKALS--LGADLVLH 353 (451)
Q Consensus 339 ~~~~pl~--~GaDiVv~ 353 (451)
.....+. -++|+|+.
T Consensus 105 ~~~~~l~~~p~vD~Vv~ 121 (497)
T TIGR02026 105 MFHQVLTEAPWIDFIVR 121 (497)
T ss_pred CHHHHHhcCCCccEEEe
Confidence 5544443 25787775
No 406
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=70.52 E-value=20 Score=37.34 Aligned_cols=86 Identities=17% Similarity=0.057 Sum_probs=60.3
Q ss_pred HHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccc-----cHHHHHHHHHhcCCEEEEecCCCCC
Q 013019 264 IFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKKGAIVCIDGTFATP 338 (451)
Q Consensus 264 ~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~-----DL~~IaelA~~~g~~lVVD~tfa~~ 338 (451)
..++.+-...+..+..-+..+.++.+.+++-. .+.|++. |--|+-. +++.|.++++..++.|++|.-+-.+
T Consensus 226 ~~i~~ir~~~~~pviiKgV~~~eda~~a~~~G-~d~I~VS---nhGGrqld~~~~~~~~L~ei~~~~~~~vi~dGGIr~g 301 (361)
T cd04736 226 QDLRWLRDLWPHKLLVKGIVTAEDAKRCIELG-ADGVILS---NHGGRQLDDAIAPIEALAEIVAATYKPVLIDSGIRRG 301 (361)
T ss_pred HHHHHHHHhCCCCEEEecCCCHHHHHHHHHCC-cCEEEEC---CCCcCCCcCCccHHHHHHHHHHHhCCeEEEeCCCCCH
Confidence 34444545555566555667888888888764 8888874 4445444 4888999888888999999876554
Q ss_pred C-ccccccCCCcEEEE
Q 013019 339 L-NQKALSLGADLVLH 353 (451)
Q Consensus 339 ~-~~~pl~~GaDiVv~ 353 (451)
. ..+.+.+|+|.|..
T Consensus 302 ~Dv~KALaLGA~aV~i 317 (361)
T cd04736 302 SDIVKALALGANAVLL 317 (361)
T ss_pred HHHHHHHHcCCCEEEE
Confidence 3 34677889998874
No 407
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=70.17 E-value=39 Score=35.07 Aligned_cols=65 Identities=20% Similarity=0.277 Sum_probs=42.8
Q ss_pred CeEEEEEeC-----CCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-------cccccCCCc-EE--EE-CCcccC
Q 013019 296 NVSLFFTES-----PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------QKALSLGAD-LV--LH-SATKFI 359 (451)
Q Consensus 296 ~tklV~les-----PsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-------~~pl~~GaD-iV--v~-S~SK~l 359 (451)
+..++++|. -+..+-...|+..|..+-+..+.++|+|-+++.+.. .....+|+| ++ +| ...|.+
T Consensus 236 n~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~sd~~~~~a~AAva~GAdGliIE~H~~pd~Al 315 (352)
T PRK13396 236 NPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKSEYVPSMAMAAIAAGTDSLMIEVHPNPAKAL 315 (352)
T ss_pred CCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcHHHHHHHHHHHHhhCCCeEEEEecCCcccCC
Confidence 356888876 223334667999999987777999999999987632 123456888 22 22 455655
Q ss_pred C
Q 013019 360 G 360 (451)
Q Consensus 360 ~ 360 (451)
+
T Consensus 316 s 316 (352)
T PRK13396 316 S 316 (352)
T ss_pred C
Confidence 4
No 408
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=66.96 E-value=1.2e+02 Score=29.28 Aligned_cols=126 Identities=14% Similarity=0.155 Sum_probs=67.0
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE--EEEeCCCCHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADME 286 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~--v~~vd~~D~d 286 (451)
.|....|-..++++.++...+=+++|+......+...+.++.+|+..+..- ......+..+...|+. ++++..+-.+
T Consensus 53 ~~~~g~~L~~l~~~~~~~~vLEiGt~~G~s~l~la~~~~~~g~v~tiD~d~-~~~~~A~~n~~~~gl~~~i~~~~gda~~ 131 (234)
T PLN02781 53 PVDEGLFLSMLVKIMNAKNTLEIGVFTGYSLLTTALALPEDGRITAIDIDK-EAYEVGLEFIKKAGVDHKINFIQSDALS 131 (234)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCcccHHHHHHHHhCCCCCEEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEEccHHH
Confidence 455666778888888888777777666433333333345455777766432 2234444455556653 3433322123
Q ss_pred HHHHhhc---CCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC
Q 013019 287 GLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 338 (451)
Q Consensus 287 ~Le~ai~---~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~ 338 (451)
.|.+... ..+..+||+...-.+.- .-++.+.++.+ .|..+++||+...+
T Consensus 132 ~L~~l~~~~~~~~fD~VfiDa~k~~y~--~~~~~~~~ll~-~GG~ii~dn~l~~G 183 (234)
T PLN02781 132 ALDQLLNNDPKPEFDFAFVDADKPNYV--HFHEQLLKLVK-VGGIIAFDNTLWFG 183 (234)
T ss_pred HHHHHHhCCCCCCCCEEEECCCHHHHH--HHHHHHHHhcC-CCeEEEEEcCCcCC
Confidence 3333221 12368999864321111 11344444444 46789999985443
No 409
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=66.65 E-value=52 Score=27.84 Aligned_cols=84 Identities=13% Similarity=0.097 Sum_probs=50.5
Q ss_pred HHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----CCHHHHHHhhcC-CCeEEEEEeCCC--CCcccc
Q 013019 240 VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNN-NNVSLFFTESPT--NPFLRC 312 (451)
Q Consensus 240 ~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----~D~d~Le~ai~~-~~tklV~lesPs--NPtG~v 312 (451)
..+..+..-|=+|+... +|..++ +..|++++.+.. .+ .++.+.|.+ .++.+|+. +|. +.....
T Consensus 16 ~~a~~l~~~G~~i~AT~----gTa~~L----~~~Gi~~~~v~~~~~~g~-~~i~~~i~~~g~idlVIn-~~~~~~~~~~~ 85 (112)
T cd00532 16 DLAPKLSSDGFPLFATG----GTSRVL----ADAGIPVRAVSKRHEDGE-PTVDAAIAEKGKFDVVIN-LRDPRRDRCTD 85 (112)
T ss_pred HHHHHHHHCCCEEEECc----HHHHHH----HHcCCceEEEEecCCCCC-cHHHHHHhCCCCEEEEEE-cCCCCcccccC
Confidence 33444455666666643 455443 346777665532 22 345556666 56777764 454 211135
Q ss_pred ccHHHHHHHHHhcCCEEEEec
Q 013019 313 VDVKLVSDLCHKKGAIVCIDG 333 (451)
Q Consensus 313 ~DL~~IaelA~~~g~~lVVD~ 333 (451)
.|-..|.+.|-++|++++.+-
T Consensus 86 ~dg~~iRR~A~~~~Ip~~T~~ 106 (112)
T cd00532 86 EDGTALLRLARLYKIPVTTPN 106 (112)
T ss_pred CChHHHHHHHHHcCCCEEECH
Confidence 567899999999999998764
No 410
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=65.63 E-value=27 Score=34.59 Aligned_cols=100 Identities=24% Similarity=0.291 Sum_probs=59.4
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcch----HHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEE
Q 013019 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKT----RIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 301 (451)
Q Consensus 226 e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t----~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~ 301 (451)
.-.+.|++|.-.-.++..+.-.-||+|+...-..+-+ ..-....++..|++-.+++.+-.+ ++ +
T Consensus 19 kv~vAfSGGvDSslLa~la~~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~~~~~-------~~-----~ 86 (269)
T COG1606 19 KVVVAFSGGVDSSLLAKLAKEALGDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKMNRMD-------PE-----F 86 (269)
T ss_pred eEEEEecCCccHHHHHHHHHHHhccceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeehhhcc-------hh-----h
Confidence 4567788888555555555444578766544333222 222334567788887776643211 11 2
Q ss_pred EeCCCCCccccc--cHHHHHHHHHhcCCEEEEecCCCC
Q 013019 302 TESPTNPFLRCV--DVKLVSDLCHKKGAIVCIDGTFAT 337 (451)
Q Consensus 302 lesPsNPtG~v~--DL~~IaelA~~~g~~lVVD~tfa~ 337 (451)
..+|-|++--+- =...|.+.+++.|.-+|+|.|-++
T Consensus 87 ~~n~~~rCY~CK~~v~~~l~~~a~~~Gyd~V~dGtNas 124 (269)
T COG1606 87 KENPENRCYLCKRAVYSTLVEEAEKRGYDVVADGTNAS 124 (269)
T ss_pred ccCCCCcchHHHHHHHHHHHHHHHHcCCCEEEeCCcHH
Confidence 334555444332 256789999999999999999443
No 411
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Probab=65.42 E-value=1.6e+02 Score=29.95 Aligned_cols=176 Identities=18% Similarity=0.125 Sum_probs=84.7
Q ss_pred ccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCe
Q 013019 173 ITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGH 251 (451)
Q Consensus 173 ~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~-aAi~~al~all~~GD~ 251 (451)
+..||+.+.-....+.+......+...-+... +.. ..+++++.+.+.-+.- .+....|. .-....+..+++.|=.
T Consensus 33 l~~Piv~apM~~vt~~~ma~ava~~GglGvi~-~~~--~~~~~~~~i~~vk~~l-~v~~~~~~~~~~~~~~~~l~eagv~ 108 (325)
T cd00381 33 LNIPLVSAPMDTVTESEMAIAMARLGGIGVIH-RNM--SIEEQAEEVRKVKGRL-LVGAAVGTREDDKERAEALVEAGVD 108 (325)
T ss_pred cCCCEEecCCCcCCcHHHHHHHHHCCCEEEEe-CCC--CHHHHHHHHHHhccCc-eEEEecCCChhHHHHHHHHHhcCCC
Confidence 55577765544333444333333221112222 222 2355666666554321 12122222 1122334456666755
Q ss_pred EEEcCCCCcch---HHHHHHhhhcCC-cEEEEeCCCCHHHHHHhhcCCCeEEEEEe-CCCC-C-----ccc-ccc---HH
Q 013019 252 IVTTTDCYRKT---RIFIETVLPKMG-ITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN-P-----FLR-CVD---VK 316 (451)
Q Consensus 252 VIv~~~~Y~~t---~~~l~~~l~~~G-i~v~~vd~~D~d~Le~ai~~~~tklV~le-sPsN-P-----tG~-v~D---L~ 316 (451)
+|.-+..++.. ...++.+-+... +.+..-...+.+..+++++-. ...|.+. .|.. - +|. ..+ +.
T Consensus 109 ~I~vd~~~G~~~~~~~~i~~ik~~~p~v~Vi~G~v~t~~~A~~l~~aG-aD~I~vg~g~G~~~~t~~~~g~g~p~~~~i~ 187 (325)
T cd00381 109 VIVIDSAHGHSVYVIEMIKFIKKKYPNVDVIAGNVVTAEAARDLIDAG-ADGVKVGIGPGSICTTRIVTGVGVPQATAVA 187 (325)
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHCCCceEEECCCCCHHHHHHHHhcC-CCEEEECCCCCcCcccceeCCCCCCHHHHHH
Confidence 55544455543 223333222222 444433556677777777653 6677652 1211 0 111 122 45
Q ss_pred HHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEEE
Q 013019 317 LVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLH 353 (451)
Q Consensus 317 ~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv~ 353 (451)
++.+.++++++++|.|.=..++ -..+.+.+|+|.|+-
T Consensus 188 ~v~~~~~~~~vpVIA~GGI~~~~di~kAla~GA~~Vmi 225 (325)
T cd00381 188 DVAAAARDYGVPVIADGGIRTSGDIVKALAAGADAVML 225 (325)
T ss_pred HHHHHHhhcCCcEEecCCCCCHHHHHHHHHcCCCEEEe
Confidence 5666677779999998765543 234567789887654
No 412
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=65.06 E-value=92 Score=32.38 Aligned_cols=97 Identities=19% Similarity=0.196 Sum_probs=56.8
Q ss_pred HHHHHhhhcCCcEEEEeCC--CCHHHHHHhhc----CCCeEEEEEe-CCCC-C--ccccccHHHHHHHHHhcCCEEEEec
Q 013019 264 IFIETVLPKMGITATVIDP--ADMEGLEAALN----NNNVSLFFTE-SPTN-P--FLRCVDVKLVSDLCHKKGAIVCIDG 333 (451)
Q Consensus 264 ~~l~~~l~~~Gi~v~~vd~--~D~d~Le~ai~----~~~tklV~le-sPsN-P--tG~v~DL~~IaelA~~~g~~lVVD~ 333 (451)
.++.. +...|..|..-.. .++++++.+++ ..+.++++++ ..++ | +-...|+..|..+-+..++++++|.
T Consensus 216 ~LL~~-~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~ 294 (360)
T PRK12595 216 ELLKA-AGRVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDV 294 (360)
T ss_pred HHHHH-HHccCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeC
Confidence 34433 3445665554333 35666665553 2234677776 2222 2 2333599999998888999999999
Q ss_pred CCCCC---C----ccccccCCCc-EEEEC-CcccCCc
Q 013019 334 TFATP---L----NQKALSLGAD-LVLHS-ATKFIGG 361 (451)
Q Consensus 334 tfa~~---~----~~~pl~~GaD-iVv~S-~SK~l~G 361 (451)
++..+ + ......+|+| +++.. +.|-..|
T Consensus 295 ~Hs~G~r~~~~~~a~aAva~GAdg~~iE~H~dp~~a~ 331 (360)
T PRK12595 295 THSTGRRDLLLPTAKAALAIGADGVMAEVHPDPAVAL 331 (360)
T ss_pred CCCCcchhhHHHHHHHHHHcCCCeEEEEecCCCCCCC
Confidence 98765 2 1224567888 44432 3555544
No 413
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=63.66 E-value=1e+02 Score=28.42 Aligned_cols=105 Identities=13% Similarity=0.181 Sum_probs=55.6
Q ss_pred CcEEEeC-CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeC
Q 013019 226 ESTVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTES 304 (451)
Q Consensus 226 e~~vv~s-SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~les 304 (451)
...+++. +|..+- .+...+.+.|.+|++..........+.+.+-...+.++...+..+.+++.+++.+ ..+|+..+
T Consensus 29 ~~vlVlGgtG~iG~-~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~diVi~at 105 (194)
T cd01078 29 KTAVVLGGTGPVGQ-RAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKG--ADVVFAAG 105 (194)
T ss_pred CEEEEECCCCHHHH-HHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhc--CCEEEECC
Confidence 3566675 466553 3334455667677665433222222222222234666666777788888888864 56777766
Q ss_pred CCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC
Q 013019 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 339 (451)
Q Consensus 305 PsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~ 339 (451)
|. |.... .+.+... ....+++|-.+..+.
T Consensus 106 ~~---g~~~~--~~~~~~~-~~~~vv~D~~~~~~~ 134 (194)
T cd01078 106 AA---GVELL--EKLAWAP-KPLAVAADVNAVPPV 134 (194)
T ss_pred CC---Cceec--hhhhccc-CceeEEEEccCCCCC
Confidence 54 33211 1111111 224689998876543
No 414
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=62.16 E-value=60 Score=33.33 Aligned_cols=116 Identities=13% Similarity=0.081 Sum_probs=61.2
Q ss_pred HHHHHHHHhhhC--C--CcEEE-eCCHHHHHHHHHHHHccCCCeEE--EcCCCCcch--HHHHHHhhhcCCcEEEEeCCC
Q 013019 213 VVVEEKMSALEG--A--ESTVI-MASGMSASTVMLLALVPAGGHIV--TTTDCYRKT--RIFIETVLPKMGITATVIDPA 283 (451)
Q Consensus 213 ~~Lee~LA~l~g--a--e~~vv-~sSG~aAi~~al~all~~GD~VI--v~~~~Y~~t--~~~l~~~l~~~Gi~v~~vd~~ 283 (451)
.+|++.+.++-+ . -++++ +++|--...++......-|..++ .-++.+..- ...++.++..+|++...+..
T Consensus 43 ~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~- 121 (343)
T TIGR03573 43 KELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI- 121 (343)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC-
Confidence 346655555432 1 33544 56666433333222122354443 445555432 22566677888998776654
Q ss_pred CHHHHHHhhcCCCeEEEEEeCCCCCccccc--cHHHHHHHHHhcCCEEEEecCC
Q 013019 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCV--DVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 284 D~d~Le~ai~~~~tklV~lesPsNPtG~v~--DL~~IaelA~~~g~~lVVD~tf 335 (451)
|.+.+....... .+ ...+|...+. -...+.++|+++|+.+|+....
T Consensus 122 d~~~~~~l~~~~-~~-----~~~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~~ 169 (343)
T TIGR03573 122 NPETFRKLQRAY-FK-----KVGDPEWPQDHAIFASVYQVALKFNIPLIIWGEN 169 (343)
T ss_pred CHHHHHHHHHHH-Hh-----ccCCCchhhhhHHHHHHHHHHHHhCCCEEEeCCC
Confidence 445444433221 11 2233433322 2467889999999999998763
No 415
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase. These enzymes adopt a TIM barrel structure. IMP dehydrogenase (1.1.1.205 from EC) (IMPDH) catalyzes the rate-limiting reaction of de novo GTP biosynthesis, the NAD-dependent reduction of IMP into XMP []. Inosine 5-phosphate + NAD+ + H2O = xanthosine 5-phosphate + NADH IMP dehydrogenase is associated with cell proliferation and is a possible target for cancer chemotherapy. Mammalian and bacterial IMPDHs are tetramers of identical chains. There are two IMP dehydrogenase isozymes in humans []. IMP dehydrogenase nearly always contains a long insertion that has two CBS domains within it. GMP reductase (1.7.1.7 from EC) catalyzes the irreversible and NADPH-dependent reductive deamination of GMP into IMP []. NADPH + guanosine 5-phosphate = NADP+ + inosine 5-phosphate + NH3 It converts nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and maintains intracellular balance of A and G nucleotides.; GO: 0003824 catalytic activity, 0055114 oxidation-reduction process; PDB: 3FFS_D 1VRD_A 1JCN_B 1EEP_B 3TSB_B 3USB_B 3TSD_A 4FF0_A 4FEZ_A 3KHJ_D ....
Probab=61.28 E-value=40 Score=35.01 Aligned_cols=119 Identities=20% Similarity=0.222 Sum_probs=67.8
Q ss_pred HHHHccCCCeEEEcCCCCcchHHHH---HHhhhcCC-cEEEEeCCCCHHHHHHhhcCCCeEEEEEe-CCCCC------cc
Q 013019 242 LLALVPAGGHIVTTTDCYRKTRIFI---ETVLPKMG-ITATVIDPADMEGLEAALNNNNVSLFFTE-SPTNP------FL 310 (451)
Q Consensus 242 l~all~~GD~VIv~~~~Y~~t~~~l---~~~l~~~G-i~v~~vd~~D~d~Le~ai~~~~tklV~le-sPsNP------tG 310 (451)
+..|++.|=.+|+-+..++.....+ +.+-+.++ +.+.--...+.+..+..++.. ...|-+- -|... +|
T Consensus 113 ~~~L~~agvD~ivID~a~g~s~~~~~~ik~ik~~~~~~~viaGNV~T~e~a~~L~~aG-ad~vkVGiGpGsiCtTr~v~G 191 (352)
T PF00478_consen 113 AEALVEAGVDVIVIDSAHGHSEHVIDMIKKIKKKFPDVPVIAGNVVTYEGAKDLIDAG-ADAVKVGIGPGSICTTREVTG 191 (352)
T ss_dssp HHHHHHTT-SEEEEE-SSTTSHHHHHHHHHHHHHSTTSEEEEEEE-SHHHHHHHHHTT--SEEEESSSSSTTBHHHHHHS
T ss_pred HHHHHHcCCCEEEccccCccHHHHHHHHHHHHHhCCCceEEecccCCHHHHHHHHHcC-CCEEEEeccCCcccccccccc
Confidence 3456667766667776777654433 33334444 555443445677777777653 5666552 22222 12
Q ss_pred ccc----cHHHHHHHHHhcCCEEEEecCCCC-CCccccccCCCcEEEECCcccCCccc
Q 013019 311 RCV----DVKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFIGGHN 363 (451)
Q Consensus 311 ~v~----DL~~IaelA~~~g~~lVVD~tfa~-~~~~~pl~~GaDiVv~S~SK~l~G~g 363 (451)
.-. -+.+.++.++++++++|.|.=.-. +-..+.+..|||.|+ +...|+|+-
T Consensus 192 vG~PQ~tAv~~~a~~a~~~~v~iIADGGi~~sGDi~KAla~GAd~VM--lG~llAgt~ 247 (352)
T PF00478_consen 192 VGVPQLTAVYECAEAARDYGVPIIADGGIRTSGDIVKALAAGADAVM--LGSLLAGTD 247 (352)
T ss_dssp BSCTHHHHHHHHHHHHHCTTSEEEEESS-SSHHHHHHHHHTT-SEEE--ESTTTTTBT
T ss_pred cCCcHHHHHHHHHHHhhhccCceeecCCcCcccceeeeeeeccccee--echhhccCc
Confidence 111 356777888889999999985332 334577888999888 455666554
No 416
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=61.12 E-value=1e+02 Score=30.51 Aligned_cols=53 Identities=17% Similarity=0.185 Sum_probs=35.9
Q ss_pred eEEEEEe-CC---CCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-------ccccccCCCc
Q 013019 297 VSLFFTE-SP---TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-------NQKALSLGAD 349 (451)
Q Consensus 297 tklV~le-sP---sNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-------~~~pl~~GaD 349 (451)
.++++++ .. .+++-...|+..|..+-+..+.+|++|-++..+. ......+|+|
T Consensus 151 ~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~r~~v~~~a~AAvA~GAd 214 (250)
T PRK13397 151 SNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGRRDLLLPAAKIAKAVGAN 214 (250)
T ss_pred CeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcccchHHHHHHHHHHhCCC
Confidence 4677776 11 1233336799999988887899999999976553 1233456887
No 417
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=59.34 E-value=1e+02 Score=25.85 Aligned_cols=22 Identities=14% Similarity=0.155 Sum_probs=16.8
Q ss_pred ccccccHHHHHHHHHhcCCEEE
Q 013019 309 FLRCVDVKLVSDLCHKKGAIVC 330 (451)
Q Consensus 309 tG~v~DL~~IaelA~~~g~~lV 330 (451)
.|...++-++++.++++|+.++
T Consensus 70 ~g~~~~~~~~~~~a~~~g~~iv 91 (139)
T cd05013 70 SGETKETVEAAEIAKERGAKVI 91 (139)
T ss_pred CCCCHHHHHHHHHHHHcCCeEE
Confidence 4666778888899999987653
No 418
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=58.99 E-value=1.3e+02 Score=29.38 Aligned_cols=109 Identities=19% Similarity=0.186 Sum_probs=55.0
Q ss_pred HHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCc--EEEE--eCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccc-c---
Q 013019 243 LALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGI--TATV--IDPADMEGLEAALNNNNVSLFFTESPTNPFLRC-V--- 313 (451)
Q Consensus 243 ~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi--~v~~--vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v-~--- 313 (451)
..+.+.| |.|.+.-..-......++ .++..|. +.-. -+.+.++.++..+..-+.-+|+.-.|.. .|.- .
T Consensus 85 ~~~~~aGad~It~H~Ea~~~~~~~l~-~Ik~~g~~~kaGlalnP~Tp~~~i~~~l~~vD~VLiMtV~PGf-gGQ~f~~~~ 162 (228)
T PRK08091 85 KACVAAGADIVTLQVEQTHDLALTIE-WLAKQKTTVLIGLCLCPETPISLLEPYLDQIDLIQILTLDPRT-GTKAPSDLI 162 (228)
T ss_pred HHHHHhCCCEEEEcccCcccHHHHHH-HHHHCCCCceEEEEECCCCCHHHHHHHHhhcCEEEEEEECCCC-CCccccHHH
Confidence 4445555 555554332112223332 3455565 4332 2445788888888642233444434432 2322 2
Q ss_pred --cHHHHHHHHHhcC--CEEEEecCCCCCCccccccCCCcEEEE
Q 013019 314 --DVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 314 --DL~~IaelA~~~g--~~lVVD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
-++++.++.+++| ..+-+|.-....-.....+.|+|++|.
T Consensus 163 l~KI~~lr~~~~~~~~~~~IeVDGGI~~~ti~~l~~aGaD~~V~ 206 (228)
T PRK08091 163 LDRVIQVENRLGNRRVEKLISIDGSMTLELASYLKQHQIDWVVS 206 (228)
T ss_pred HHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHCCCCEEEE
Confidence 2455555556655 679999753322222334679998774
No 419
>PLN02274 inosine-5'-monophosphate dehydrogenase
Probab=58.90 E-value=68 Score=34.92 Aligned_cols=110 Identities=20% Similarity=0.187 Sum_probs=69.3
Q ss_pred HHHHccCCCeEEEcCCCCcchHH---HHHHhhhcC-CcEEEEeCCCCHHHHHHhhcCCCeEEEEEeC-CC----CC--c-
Q 013019 242 LLALVPAGGHIVTTTDCYRKTRI---FIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTES-PT----NP--F- 309 (451)
Q Consensus 242 l~all~~GD~VIv~~~~Y~~t~~---~l~~~l~~~-Gi~v~~vd~~D~d~Le~ai~~~~tklV~les-Ps----NP--t- 309 (451)
+.+|++.|-.||+-+..++.... .++.+-+.+ +..+..-+..+.++.+.+++.. ...|.+.. |. ++ +
T Consensus 253 ~~~l~~ag~d~i~iD~~~g~~~~~~~~i~~ik~~~p~~~vi~g~v~t~e~a~~a~~aG-aD~i~vg~g~G~~~~t~~~~~ 331 (505)
T PLN02274 253 LEHLVKAGVDVVVLDSSQGDSIYQLEMIKYIKKTYPELDVIGGNVVTMYQAQNLIQAG-VDGLRVGMGSGSICTTQEVCA 331 (505)
T ss_pred HHHHHHcCCCEEEEeCCCCCcHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHcC-cCEEEECCCCCccccCccccc
Confidence 45677778667777777776443 344433334 3555444666788878777653 66776531 11 11 1
Q ss_pred -c--ccccHHHHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEE
Q 013019 310 -L--RCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (451)
Q Consensus 310 -G--~v~DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv 352 (451)
| ...++..+.+++++.+++||.|.-+..+ -..+.+.+|||.|+
T Consensus 332 ~g~~~~~~i~~~~~~~~~~~vpVIadGGI~~~~di~kAla~GA~~V~ 378 (505)
T PLN02274 332 VGRGQATAVYKVASIAAQHGVPVIADGGISNSGHIVKALTLGASTVM 378 (505)
T ss_pred cCCCcccHHHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 2 2236778899999999999999976554 23567788888665
No 420
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=57.17 E-value=62 Score=28.95 Aligned_cols=88 Identities=16% Similarity=0.230 Sum_probs=53.6
Q ss_pred EEeC-CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCC
Q 013019 229 VIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 307 (451)
Q Consensus 229 vv~s-SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsN 307 (451)
++++ +|.-+- .++..|++.|-+|.+....-.... . ..++++...|..|++.+.+++.. ...|+...+.+
T Consensus 2 ~V~GatG~vG~-~l~~~L~~~~~~V~~~~R~~~~~~----~---~~~~~~~~~d~~d~~~~~~al~~--~d~vi~~~~~~ 71 (183)
T PF13460_consen 2 LVFGATGFVGR-ALAKQLLRRGHEVTALVRSPSKAE----D---SPGVEIIQGDLFDPDSVKAALKG--ADAVIHAAGPP 71 (183)
T ss_dssp EEETTTSHHHH-HHHHHHHHTTSEEEEEESSGGGHH----H---CTTEEEEESCTTCHHHHHHHHTT--SSEEEECCHST
T ss_pred EEECCCChHHH-HHHHHHHHCCCEEEEEecCchhcc----c---ccccccceeeehhhhhhhhhhhh--cchhhhhhhhh
Confidence 3444 455443 345567777766665432222111 1 55788888899999999999985 45566544332
Q ss_pred CccccccHHHHHHHHHhcCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGA 327 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~ 327 (451)
+. .....+.+.+.|+++|+
T Consensus 72 ~~-~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 72 PK-DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp TT-HHHHHHHHHHHHHHTTS
T ss_pred cc-ccccccccccccccccc
Confidence 22 33346778888888775
No 421
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=57.05 E-value=67 Score=33.12 Aligned_cols=131 Identities=18% Similarity=0.248 Sum_probs=80.2
Q ss_pred HHHHHHHHHHccCCCeEEEc-CCCCcc-hHHHHHHhhhcCCcEEEEe-CCCC-----HHHHHHhhcCCCeEEEEEeCCC-
Q 013019 236 SASTVMLLALVPAGGHIVTT-TDCYRK-TRIFIETVLPKMGITATVI-DPAD-----MEGLEAALNNNNVSLFFTESPT- 306 (451)
Q Consensus 236 aAi~~al~all~~GD~VIv~-~~~Y~~-t~~~l~~~l~~~Gi~v~~v-d~~D-----~d~Le~ai~~~~tklV~lesPs- 306 (451)
..|.-+..-+.+.|-.|++. .++|.. ....++...++.|+++.-- ...| .++++.+..++ ..+|++.+-.
T Consensus 154 TTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~-~DvvliDTAGR 232 (340)
T COG0552 154 TTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARG-IDVVLIDTAGR 232 (340)
T ss_pred hHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcC-CCEEEEeCccc
Confidence 45555555667788776554 455533 2334555577888887652 2345 46778777764 8999998753
Q ss_pred --CCccccccHHHHHHHHHhcC------CEEEEecCCCCCCcccc--c--cCCCcEEEECCcccCCccccceeEEEEe
Q 013019 307 --NPFLRCVDVKLVSDLCHKKG------AIVCIDGTFATPLNQKA--L--SLGADLVLHSATKFIGGHNDVLAGSISG 372 (451)
Q Consensus 307 --NPtG~v~DL~~IaelA~~~g------~~lVVD~tfa~~~~~~p--l--~~GaDiVv~S~SK~l~G~gdv~gG~Iv~ 372 (451)
|-..-+..|++|.+++++.. +++++|.+-+.--..+. + ..+.|-++ +||.=+.. .||.++.
T Consensus 233 Lhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l~GiI--lTKlDgtA---KGG~il~ 305 (340)
T COG0552 233 LHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGLDGII--LTKLDGTA---KGGIILS 305 (340)
T ss_pred ccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCCceEE--EEecccCC---Ccceeee
Confidence 44444456888888888754 67888999664321111 1 22456555 67865433 6888774
No 422
>PRK14057 epimerase; Provisional
Probab=56.32 E-value=1.3e+02 Score=29.86 Aligned_cols=72 Identities=18% Similarity=0.209 Sum_probs=40.7
Q ss_pred CCCCHHHHHHhhcCCCeEEEEEeCCCCCccccc------cHHHHHHHHHhcC--CEEEEecCCCCCCccccccCCCcEEE
Q 013019 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCV------DVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVL 352 (451)
Q Consensus 281 d~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~------DL~~IaelA~~~g--~~lVVD~tfa~~~~~~pl~~GaDiVv 352 (451)
+...++.++..+..-..-+|+.-+|.. .|.-. -++++.++.+++| ..+-+|.-....-.....+.|+|++|
T Consensus 141 P~Tp~e~i~~~l~~vD~VLvMtV~PGf-gGQ~Fi~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~ti~~l~~aGad~~V 219 (254)
T PRK14057 141 PATPLDVIIPILSDVEVIQLLAVNPGY-GSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQGIDRVV 219 (254)
T ss_pred CCCCHHHHHHHHHhCCEEEEEEECCCC-CchhccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHCCCCEEE
Confidence 446788888888642223333333432 23222 2455555656655 77999985443222334567999887
Q ss_pred E
Q 013019 353 H 353 (451)
Q Consensus 353 ~ 353 (451)
.
T Consensus 220 ~ 220 (254)
T PRK14057 220 S 220 (254)
T ss_pred E
Confidence 4
No 423
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=55.65 E-value=48 Score=28.09 Aligned_cols=66 Identities=20% Similarity=0.222 Sum_probs=48.4
Q ss_pred HHHHHHhhhcCCcE-EEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC
Q 013019 263 RIFIETVLPKMGIT-ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 263 ~~~l~~~l~~~Gi~-v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t 334 (451)
...++.+.+++|+. +.++.+.--|.-+-.++.- +-.|++..+.+ .|++-|..+|+++|+.+.++.-
T Consensus 22 ~~~v~~i~~~~gI~diN~IKPGIgEaTRvLLRRv-P~~vLVr~~~~-----pd~~Hl~~LA~ekgVpVe~~~d 88 (100)
T PF15608_consen 22 WAEVERIAERYGISDINLIKPGIGEATRVLLRRV-PWKVLVRDPDD-----PDLAHLLLLAEEKGVPVEVYPD 88 (100)
T ss_pred HHHHHHHHHHhCCCCcccccCChhHHHHHHHhcC-CCEEEECCCCC-----ccHHHHHHHHHHcCCcEEEeCC
Confidence 45566777888874 5556665556666667664 66777777776 5899999999999999988764
No 424
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=55.04 E-value=64 Score=24.65 Aligned_cols=60 Identities=15% Similarity=0.211 Sum_probs=36.4
Q ss_pred HHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEe
Q 013019 267 ETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 267 ~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD 332 (451)
..+++..|++++.+... .+.++. + +.-+|++ .|.-......++++|.++.++-|-++|+|
T Consensus 11 ~~~L~~~g~~v~~~~~~-~~~l~~---~-~~tll~i-~~~~~~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 11 YQLLEEQGVKVERWRKP-YEALEA---D-DGTLLVI-GPDLRLSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHCCCeeEEeccc-HHHhCC---C-CCEEEEE-eCCCCCCchHHHHHHHHHHHcCCEEEEeC
Confidence 35677779998866543 455432 2 3455555 34422222356889999998777777664
No 425
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=54.41 E-value=1.5e+02 Score=31.61 Aligned_cols=85 Identities=15% Similarity=0.174 Sum_probs=52.0
Q ss_pred HccCCCeEEEcCCCCcchHHHHHHhhhcCCcE---EEEeCCCCHHHHHHhhcCCCeEEEEEeCCCC---Cc-----cccc
Q 013019 245 LVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT---ATVIDPADMEGLEAALNNNNVSLFFTESPTN---PF-----LRCV 313 (451)
Q Consensus 245 ll~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~---v~~vd~~D~d~Le~ai~~~~tklV~lesPsN---Pt-----G~v~ 313 (451)
+.+.+ +|+.-...-.. ..++..+.++|+. +......+++++.+.+++.+++++++.+... +. |.+.
T Consensus 117 lA~~~-~vLYVsGEES~--~QiklRA~RL~~~~~~l~l~aEt~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVs 193 (456)
T COG1066 117 LAKRG-KVLYVSGEESL--QQIKLRADRLGLPTNNLYLLAETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVS 193 (456)
T ss_pred HHhcC-cEEEEeCCcCH--HHHHHHHHHhCCCccceEEehhcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHH
Confidence 44455 55554333222 2233345666642 3334456899999989877789999988762 22 4443
Q ss_pred cH----HHHHHHHHhcCCEEEEe
Q 013019 314 DV----KLVSDLCHKKGAIVCID 332 (451)
Q Consensus 314 DL----~~IaelA~~~g~~lVVD 332 (451)
-. .+|.++|++.|+.+++=
T Consensus 194 QVRe~t~~L~~~AK~~~i~~fiV 216 (456)
T COG1066 194 QVREVAAELMRLAKTKNIAIFIV 216 (456)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEE
Confidence 33 47889999999886653
No 426
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=53.62 E-value=83 Score=34.17 Aligned_cols=113 Identities=17% Similarity=0.159 Sum_probs=68.7
Q ss_pred HHHHHHccCCCeEEEcCCCCcchHH---HHHHhhhcC-CcEEEEeCCCCHHHHHHhhcCCCeEEEEEe-CCCCC--c---
Q 013019 240 VMLLALVPAGGHIVTTTDCYRKTRI---FIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTNP--F--- 309 (451)
Q Consensus 240 ~al~all~~GD~VIv~~~~Y~~t~~---~l~~~l~~~-Gi~v~~vd~~D~d~Le~ai~~~~tklV~le-sPsNP--t--- 309 (451)
..+.++++.|-.+|+-+..++.+.. .++.+-+.+ ++.+..-+..+.++.+.+++-. ...|.+. .|..- |
T Consensus 244 ~~~~~l~~ag~d~i~id~a~G~s~~~~~~i~~ik~~~~~~~v~aG~V~t~~~a~~~~~aG-ad~I~vg~g~Gs~~~t~~~ 322 (495)
T PTZ00314 244 ERAAALIEAGVDVLVVDSSQGNSIYQIDMIKKLKSNYPHVDIIAGNVVTADQAKNLIDAG-ADGLRIGMGSGSICITQEV 322 (495)
T ss_pred HHHHHHHHCCCCEEEEecCCCCchHHHHHHHHHHhhCCCceEEECCcCCHHHHHHHHHcC-CCEEEECCcCCcccccchh
Confidence 3445677888777777777764433 344443333 3444333456778888777654 6677552 12210 1
Q ss_pred ---cc--cccHHHHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEEE
Q 013019 310 ---LR--CVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLH 353 (451)
Q Consensus 310 ---G~--v~DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv~ 353 (451)
|. ...+.++.++|+++|+++|.|.=..++ -..+.+.+|||.|+-
T Consensus 323 ~~~g~p~~~ai~~~~~~~~~~~v~vIadGGi~~~~di~kAla~GA~~Vm~ 372 (495)
T PTZ00314 323 CAVGRPQASAVYHVARYARERGVPCIADGGIKNSGDICKALALGADCVML 372 (495)
T ss_pred ccCCCChHHHHHHHHHHHhhcCCeEEecCCCCCHHHHHHHHHcCCCEEEE
Confidence 11 123566778888999999999876554 235677889997764
No 427
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=53.30 E-value=44 Score=33.43 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=25.2
Q ss_pred EEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC
Q 013019 298 SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 298 klV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t 334 (451)
|-|++|=|- +.+..+.++|.++|+++|..+.+.-.
T Consensus 92 khVl~EKPl--a~t~~ea~~l~~~a~~~~~~l~v~~~ 126 (342)
T COG0673 92 KHVLCEKPL--ALTLEEAEELVELARKAGVKLMVGFN 126 (342)
T ss_pred CEEEEcCCC--CCCHHHHHHHHHHHHHcCCceeeehh
Confidence 445555554 33445778999999999999988876
No 428
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=52.95 E-value=68 Score=27.54 Aligned_cols=93 Identities=14% Similarity=0.053 Sum_probs=54.8
Q ss_pred HHHHHHhhhcCCcEEEEeCCC-CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc---CCEEEEecCCCCC
Q 013019 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDGTFATP 338 (451)
Q Consensus 263 ~~~l~~~l~~~Gi~v~~vd~~-D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~---g~~lVVD~tfa~~ 338 (451)
..++..+++..|.++.+.-.. .++++.+++.+.++.+|.++.-. .-....++++.+..++. ++.+++=.....-
T Consensus 16 ~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~--~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~ 93 (122)
T cd02071 16 AKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLS--GGHMTLFPEVIELLRELGAGDILVVGGGIIPPE 93 (122)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccc--hhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHH
Confidence 344556678889998876543 45666555555558888886544 22334577888877776 4566665442211
Q ss_pred CccccccCCCcEEEECCcc
Q 013019 339 LNQKALSLGADLVLHSATK 357 (451)
Q Consensus 339 ~~~~pl~~GaDiVv~S~SK 357 (451)
...+..++|.|-+++.-++
T Consensus 94 ~~~~~~~~G~d~~~~~~~~ 112 (122)
T cd02071 94 DYELLKEMGVAEIFGPGTS 112 (122)
T ss_pred HHHHHHHCCCCEEECCCCC
Confidence 1112235677777764443
No 429
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=52.68 E-value=13 Score=41.38 Aligned_cols=39 Identities=23% Similarity=0.276 Sum_probs=34.2
Q ss_pred eEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCC
Q 013019 297 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (451)
Q Consensus 297 tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~ 337 (451)
+...| .|++..|...|++++++.||++||-||+|-+++-
T Consensus 200 ~~g~y--Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~~H 238 (628)
T COG0296 200 GTGYY--APTSRYGTPEDFKALVDAAHQAGIGVILDWVPNH 238 (628)
T ss_pred cceec--cccccCCCHHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 34444 6999999999999999999999999999999654
No 430
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=52.02 E-value=71 Score=32.61 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=63.3
Q ss_pred EEEeCCHHHHH-HHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEE-----
Q 013019 228 TVIMASGMSAS-TVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF----- 301 (451)
Q Consensus 228 ~vv~sSG~aAi-~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~----- 301 (451)
.+++++|+.=| ......|++.|-.|++-|....+....+.... +++...|..|-+.|.+.+.++++..|+
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~----~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~ 77 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ----FKFYEGDLLDRALLTAVFEENKIDAVVHFAAS 77 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc----CceEEeccccHHHHHHHHHhcCCCEEEECccc
Confidence 35666666322 34455678899888888887777665543321 455556777888888888775555443
Q ss_pred ---EeCCCCCcccc----ccHHHHHHHHHhcCCE-EEEecC
Q 013019 302 ---TESPTNPFLRC----VDVKLVSDLCHKKGAI-VCIDGT 334 (451)
Q Consensus 302 ---lesPsNPtG~v----~DL~~IaelA~~~g~~-lVVD~t 334 (451)
-|+..+|.-.. .---.|.+.++++|+. +|.-.+
T Consensus 78 ~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSSt 118 (329)
T COG1087 78 ISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSST 118 (329)
T ss_pred cccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecc
Confidence 25555553211 1234678888888875 444444
No 431
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=50.42 E-value=2.1e+02 Score=26.85 Aligned_cols=88 Identities=16% Similarity=0.100 Sum_probs=55.7
Q ss_pred HHHHHhhhcCCcEEEEeCC-CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc----CCEEEEecCCCCC
Q 013019 264 IFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK----GAIVCIDGTFATP 338 (451)
Q Consensus 264 ~~l~~~l~~~Gi~v~~vd~-~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~----g~~lVVD~tfa~~ 338 (451)
.++..+++..|.++.+... ...+++.+++.+.++.+|.+..-. +.....++++.+..++. ++.+++=....+.
T Consensus 100 ~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~--~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~~ 177 (201)
T cd02070 100 NLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALM--TTTMGGMKEVIEALKEAGLRDKVKVMVGGAPVNQ 177 (201)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHHCCCCcCCeEEEECCcCCH
Confidence 4455678889999876543 246788887776668888885433 23345678888888775 4567776643222
Q ss_pred CccccccCCCcEEEECC
Q 013019 339 LNQKALSLGADLVLHSA 355 (451)
Q Consensus 339 ~~~~pl~~GaDiVv~S~ 355 (451)
. -....|+|.+..+.
T Consensus 178 ~--~~~~~GaD~~~~da 192 (201)
T cd02070 178 E--FADEIGADGYAEDA 192 (201)
T ss_pred H--HHHHcCCcEEECCH
Confidence 1 11245788776543
No 432
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=49.81 E-value=2e+02 Score=27.78 Aligned_cols=109 Identities=17% Similarity=0.164 Sum_probs=54.8
Q ss_pred HHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEE--eCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccc------
Q 013019 243 LALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV------ 313 (451)
Q Consensus 243 ~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~--vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~------ 313 (451)
..+...| |.|.+.-..-....+.+ ...+..|++.-. -+...++.++..+..-+.-+|+.-.|.. .|.-.
T Consensus 79 ~~~~~~gad~I~~H~Ea~~~~~~~l-~~Ir~~g~k~GlalnP~T~~~~i~~~l~~vD~VlvMtV~PGf-~GQ~fi~~~l~ 156 (223)
T PRK08745 79 PDFADAGATTISFHPEASRHVHRTI-QLIKSHGCQAGLVLNPATPVDILDWVLPELDLVLVMSVNPGF-GGQAFIPSALD 156 (223)
T ss_pred HHHHHhCCCEEEEcccCcccHHHHH-HHHHHCCCceeEEeCCCCCHHHHHHHHhhcCEEEEEEECCCC-CCccccHHHHH
Confidence 3444555 55555433222223333 234555665433 2445678888877642223344333432 13222
Q ss_pred cHHHHHHHHHhcC--CEEEEecCCCCCCccccccCCCcEEEE
Q 013019 314 DVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 314 DL~~IaelA~~~g--~~lVVD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
.++++.++..+++ ..+-+|.-....-.....+.|+|++|.
T Consensus 157 KI~~l~~~~~~~~~~~~IeVDGGI~~eti~~l~~aGaDi~V~ 198 (223)
T PRK08745 157 KLRAIRKKIDALGKPIRLEIDGGVKADNIGAIAAAGADTFVA 198 (223)
T ss_pred HHHHHHHHHHhcCCCeeEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 2455555555554 778999753322222334679998874
No 433
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=49.36 E-value=1.5e+02 Score=26.56 Aligned_cols=48 Identities=13% Similarity=0.096 Sum_probs=32.8
Q ss_pred HHHHHhhcCCCeEEEEEeCC--CCCccccccHHHHHHHHHhcCCEEEEecC
Q 013019 286 EGLEAALNNNNVSLFFTESP--TNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 286 d~Le~ai~~~~tklV~lesP--sNPtG~v~DL~~IaelA~~~g~~lVVD~t 334 (451)
..+.+.|...++.+|+. +| ..+.+...|...|.+.|-++|++++..-.
T Consensus 65 ~~i~~~I~~g~i~lVIn-t~dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l~ 114 (142)
T PRK05234 65 QQIGALIAEGKIDMLIF-FRDPLTAQPHDPDVKALLRLADVWNIPVATNRA 114 (142)
T ss_pred hhHHHHHHcCceeEEEE-ecCCCCCCcccchHHHHHHHHHHcCCCEEcCHH
Confidence 34555666655777654 45 44444356888999999999999886553
No 434
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=48.13 E-value=1.6e+02 Score=28.23 Aligned_cols=107 Identities=20% Similarity=0.279 Sum_probs=52.9
Q ss_pred HHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEEe--CCCCHHHHHHhhcCCCeEEEEEeCCCCCc--cc-cc---
Q 013019 243 LALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI--DPADMEGLEAALNNNNVSLFFTESPTNPF--LR-CV--- 313 (451)
Q Consensus 243 ~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v--d~~D~d~Le~ai~~~~tklV~lesPsNPt--G~-v~--- 313 (451)
..+.+.| |.|.+.-..-....+.+ ...+..|++.-.. +...++.++..+.. +.+|.+-+. ||. |. ..
T Consensus 75 ~~~~~~gad~i~~H~Ea~~~~~~~l-~~ik~~g~k~GlalnP~Tp~~~i~~~l~~--~D~vlvMtV-~PGfgGq~fi~~~ 150 (220)
T PRK08883 75 PDFAKAGASMITFHVEASEHVDRTL-QLIKEHGCQAGVVLNPATPLHHLEYIMDK--VDLILLMSV-NPGFGGQSFIPHT 150 (220)
T ss_pred HHHHHhCCCEEEEcccCcccHHHHH-HHHHHcCCcEEEEeCCCCCHHHHHHHHHh--CCeEEEEEe-cCCCCCceecHhH
Confidence 3444455 55555333222222333 2345566654432 34567888887764 444444322 342 21 11
Q ss_pred --cHHHHHHHHHhcC--CEEEEecCCCCCCccccccCCCcEEEE
Q 013019 314 --DVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 314 --DL~~IaelA~~~g--~~lVVD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
.++++.++.+++| +++.+|.-....-.....+.|+|+++-
T Consensus 151 lekI~~l~~~~~~~~~~~~I~vdGGI~~eni~~l~~aGAd~vVv 194 (220)
T PRK08883 151 LDKLRAVRKMIDESGRDIRLEIDGGVKVDNIREIAEAGADMFVA 194 (220)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 2445555555544 778899753321122334679997763
No 435
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=47.90 E-value=1.8e+02 Score=27.71 Aligned_cols=101 Identities=15% Similarity=0.071 Sum_probs=56.2
Q ss_pred HHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCC-cEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHH
Q 013019 240 VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG-ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (451)
Q Consensus 240 ~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~G-i~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~I 318 (451)
.+..++...|=+++=-+..-......++.+.+.++ +.+---...+.++++++++-. .+.|+ +|+- -.++
T Consensus 24 ~~~~al~~~Gi~~iEit~~t~~a~~~i~~l~~~~~~~~vGAGTVl~~~~a~~a~~aG-A~Fiv--sP~~-------~~~v 93 (204)
T TIGR01182 24 PLAKALIEGGLRVLEVTLRTPVALDAIRLLRKEVPDALIGAGTVLNPEQLRQAVDAG-AQFIV--SPGL-------TPEL 93 (204)
T ss_pred HHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHcC-CCEEE--CCCC-------CHHH
Confidence 44556666664433222222333444444433332 323222356889999998764 55554 5651 2489
Q ss_pred HHHHHhcCCEEEEecCCCCCCccccccCCCcEE
Q 013019 319 SDLCHKKGAIVCIDGTFATPLNQKALSLGADLV 351 (451)
Q Consensus 319 aelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiV 351 (451)
.+.|+++|++++--..-. .-....+++|+|++
T Consensus 94 ~~~~~~~~i~~iPG~~Tp-tEi~~A~~~Ga~~v 125 (204)
T TIGR01182 94 AKHAQDHGIPIIPGVATP-SEIMLALELGITAL 125 (204)
T ss_pred HHHHHHcCCcEECCCCCH-HHHHHHHHCCCCEE
Confidence 999999999887632211 12234567888865
No 436
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=47.48 E-value=1.7e+02 Score=24.45 Aligned_cols=85 Identities=14% Similarity=0.116 Sum_probs=53.1
Q ss_pred HHHHHhhhcCCcEEEEeCCC-CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc--CCEEEEecCCCCCCc
Q 013019 264 IFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN 340 (451)
Q Consensus 264 ~~l~~~l~~~Gi~v~~vd~~-D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~--g~~lVVD~tfa~~~~ 340 (451)
..+...++..|.++.+.... ..+++.+.+.+.++++|.+..-. +....+++.+.++.+++ ++.+++=..+.+...
T Consensus 17 ~~~~~~l~~~G~~v~~l~~~~~~~~~~~~i~~~~pdiV~iS~~~--~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~t~~~ 94 (125)
T cd02065 17 NIVAIALRDNGFEVIDLGVDVPPEEIVEAAKEEDADVVGLSALS--TTHMEAMKLVIEALKELGIDIPVVVGGAHPTADP 94 (125)
T ss_pred HHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEEecch--HhHHHHHHHHHHHHHhcCCCCeEEEeCCcCCccc
Confidence 34455677889998877543 34566666655558888884332 22224567777777776 588988887665433
Q ss_pred cccccCCCcEEEE
Q 013019 341 QKALSLGADLVLH 353 (451)
Q Consensus 341 ~~pl~~GaDiVv~ 353 (451)
.. ..+|+++.
T Consensus 95 ~~---~~~d~~~~ 104 (125)
T cd02065 95 EE---PKVDAVVI 104 (125)
T ss_pred cc---cccceeee
Confidence 32 34566664
No 437
>smart00642 Aamy Alpha-amylase domain.
Probab=46.89 E-value=20 Score=32.94 Aligned_cols=31 Identities=26% Similarity=0.292 Sum_probs=26.7
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
....|...+++++++.||++|+.|++|-++.
T Consensus 63 ~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 63 DPRFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3346888899999999999999999998854
No 438
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=46.76 E-value=1.1e+02 Score=26.88 Aligned_cols=93 Identities=15% Similarity=0.104 Sum_probs=52.8
Q ss_pred CCcchHHHHHHhhhcCCcEEEEeCCC-CHHHH-HHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcC---CEEEEe
Q 013019 258 CYRKTRIFIETVLPKMGITATVIDPA-DMEGL-EAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG---AIVCID 332 (451)
Q Consensus 258 ~Y~~t~~~l~~~l~~~Gi~v~~vd~~-D~d~L-e~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g---~~lVVD 332 (451)
.|.--..++..+++..|+++...... .++++ +++.+. +..+|.+++-. +.....++++.+..++.| +.+++=
T Consensus 14 ~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~-~adii~iSsl~--~~~~~~~~~~~~~L~~~g~~~i~vivG 90 (132)
T TIGR00640 14 GHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEA-DVHVVGVSSLA--GGHLTLVPALRKELDKLGRPDILVVVG 90 (132)
T ss_pred ccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHc-CCCEEEEcCch--hhhHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 34444456667788889998765432 35554 555544 58888885444 334445788888887764 556664
Q ss_pred cCCCCCCccccccCCCcEEEE
Q 013019 333 GTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 333 ~tfa~~~~~~pl~~GaDiVv~ 353 (451)
......-...-.++|.|-+++
T Consensus 91 G~~~~~~~~~l~~~Gvd~~~~ 111 (132)
T TIGR00640 91 GVIPPQDFDELKEMGVAEIFG 111 (132)
T ss_pred CCCChHhHHHHHHCCCCEEEC
Confidence 332211111223456665554
No 439
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=46.65 E-value=46 Score=27.74 Aligned_cols=19 Identities=16% Similarity=0.305 Sum_probs=10.6
Q ss_pred ccHHHHHHHHHhcCCEEEE
Q 013019 313 VDVKLVSDLCHKKGAIVCI 331 (451)
Q Consensus 313 ~DL~~IaelA~~~g~~lVV 331 (451)
.+.++|.++++++|..+.+
T Consensus 100 ~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 100 EEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp HHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHHHHHHHHhCCEEEE
Confidence 3455666666666655544
No 440
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=46.55 E-value=1.5e+02 Score=31.34 Aligned_cols=107 Identities=19% Similarity=0.236 Sum_probs=66.6
Q ss_pred cEEEeCCHHHHHHHHHHHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCC
Q 013019 227 STVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (451)
Q Consensus 227 ~~vv~sSG~aAi~~al~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesP 305 (451)
..+++++|.-+-..+ .-+.+.| .+|.+.+-.-....++..... -+++...+|..|.+++.++|++. .+|+-.-|
T Consensus 3 ~ilviGaG~Vg~~va-~~la~~~d~~V~iAdRs~~~~~~i~~~~~--~~v~~~~vD~~d~~al~~li~~~--d~VIn~~p 77 (389)
T COG1748 3 KILVIGAGGVGSVVA-HKLAQNGDGEVTIADRSKEKCARIAELIG--GKVEALQVDAADVDALVALIKDF--DLVINAAP 77 (389)
T ss_pred cEEEECCchhHHHHH-HHHHhCCCceEEEEeCCHHHHHHHHhhcc--ccceeEEecccChHHHHHHHhcC--CEEEEeCC
Confidence 567888888554333 3344555 456665543333222221111 15777788999999999999874 77777777
Q ss_pred CCCccccc------------------cHHHHHHHHHhcCCEEEEecCCCCC
Q 013019 306 TNPFLRCV------------------DVKLVSDLCHKKGAIVCIDGTFATP 338 (451)
Q Consensus 306 sNPtG~v~------------------DL~~IaelA~~~g~~lVVD~tfa~~ 338 (451)
...+..+. +..++.+.|++.|+..|.+.=|..+
T Consensus 78 ~~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPG 128 (389)
T COG1748 78 PFVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPG 128 (389)
T ss_pred chhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcc
Confidence 64433221 1356788888889888888776654
No 441
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=46.52 E-value=1.1e+02 Score=23.72 Aligned_cols=53 Identities=15% Similarity=0.139 Sum_probs=29.5
Q ss_pred CcEEEEeCCCCHHHHH--HhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEE
Q 013019 274 GITATVIDPADMEGLE--AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (451)
Q Consensus 274 Gi~v~~vd~~D~d~Le--~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVV 331 (451)
|.++..++.......+ ..++++ .-+|++ + ..|...++.++.+.++++|+.+|.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~-d~~i~i-S---~sg~t~~~~~~~~~a~~~g~~ii~ 79 (87)
T cd04795 25 GIEVVALIATELEHASLLSLLRKG-DVVIAL-S---YSGRTEELLAALEIAKELGIPVIA 79 (87)
T ss_pred CCceEEeCCcHHHHHHHHhcCCCC-CEEEEE-E---CCCCCHHHHHHHHHHHHcCCeEEE
Confidence 5655554433222222 233443 334444 2 335566788899999999987653
No 442
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=46.07 E-value=1.1e+02 Score=31.50 Aligned_cols=87 Identities=16% Similarity=0.156 Sum_probs=46.2
Q ss_pred EEeCCHHHHHHHHHHHHccCCC--eEEEcCCCCcchHHHHHHhh---hcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEe
Q 013019 229 VIMASGMSASTVMLLALVPAGG--HIVTTTDCYRKTRIFIETVL---PKMGITATVIDPADMEGLEAALNNNNVSLFFTE 303 (451)
Q Consensus 229 vv~sSG~aAi~~al~all~~GD--~VIv~~~~Y~~t~~~l~~~l---~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~le 303 (451)
++++.|..+-. ++..|.+.++ +|++.+..- .-++... ....++...+|..|.++|++.+++ .++|+-+
T Consensus 2 lvlG~G~vG~~-~~~~L~~~~~~~~v~va~r~~----~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~--~dvVin~ 74 (386)
T PF03435_consen 2 LVLGAGRVGSA-IARLLARRGPFEEVTVADRNP----EKAERLAEKLLGDRVEAVQVDVNDPESLAELLRG--CDVVINC 74 (386)
T ss_dssp EEE--SHHHHH-HHHHHHCTTCE-EEEEEESSH----HHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTT--SSEEEE-
T ss_pred EEEcCcHHHHH-HHHHHhcCCCCCcEEEEECCH----HHHHHHHhhccccceeEEEEecCCHHHHHHHHhc--CCEEEEC
Confidence 45666663332 2344555554 666654332 2222333 234677777899999999999976 4777765
Q ss_pred CCCCCccccccHHHHHHHHHhcCCE
Q 013019 304 SPTNPFLRCVDVKLVSDLCHKKGAI 328 (451)
Q Consensus 304 sPsNPtG~v~DL~~IaelA~~~g~~ 328 (451)
.|.. .-..|++.|.++|+.
T Consensus 75 ~gp~------~~~~v~~~~i~~g~~ 93 (386)
T PF03435_consen 75 AGPF------FGEPVARACIEAGVH 93 (386)
T ss_dssp SSGG------GHHHHHHHHHHHT-E
T ss_pred Cccc------hhHHHHHHHHHhCCC
Confidence 5432 233566666666655
No 443
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=45.52 E-value=1.4e+02 Score=32.42 Aligned_cols=114 Identities=18% Similarity=0.137 Sum_probs=66.2
Q ss_pred HHHHHHHHccCCCeEEEcCCCCcchHHH---HHHhhhcC-CcEEEEeCCCCHHHHHHhhcCCCeEEEE-------EeCCC
Q 013019 238 STVMLLALVPAGGHIVTTTDCYRKTRIF---IETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFF-------TESPT 306 (451)
Q Consensus 238 i~~al~all~~GD~VIv~~~~Y~~t~~~---l~~~l~~~-Gi~v~~vd~~D~d~Le~ai~~~~tklV~-------lesPs 306 (451)
+...+..++..|-.+|+-+..++..... ++.+-+.+ ++.+.--+..+.+..+.+++-. ...|- +|+-.
T Consensus 228 ~~~~a~~Lv~aGvd~i~~D~a~~~~~~~~~~i~~ik~~~p~~~v~agnv~t~~~a~~l~~aG-ad~v~vgig~gsictt~ 306 (479)
T PRK07807 228 VAAKARALLEAGVDVLVVDTAHGHQEKMLEALRAVRALDPGVPIVAGNVVTAEGTRDLVEAG-ADIVKVGVGPGAMCTTR 306 (479)
T ss_pred HHHHHHHHHHhCCCEEEEeccCCccHHHHHHHHHHHHHCCCCeEEeeccCCHHHHHHHHHcC-CCEEEECccCCcccccc
Confidence 3445566777887778888888764333 33333333 3444333566777777777643 44443 12223
Q ss_pred CCcccc-ccHHHHHHHH---HhcCCEEEEecCCCCC-CccccccCCCcEEE
Q 013019 307 NPFLRC-VDVKLVSDLC---HKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (451)
Q Consensus 307 NPtG~v-~DL~~IaelA---~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv 352 (451)
..||.- .++..|.+++ +++++++|.|.-...+ -..+.+.+|+|.|+
T Consensus 307 ~~~~~~~p~~~av~~~~~~~~~~~~~via~ggi~~~~~~~~al~~ga~~v~ 357 (479)
T PRK07807 307 MMTGVGRPQFSAVLECAAAARELGAHVWADGGVRHPRDVALALAAGASNVM 357 (479)
T ss_pred cccCCchhHHHHHHHHHHHHHhcCCcEEecCCCCCHHHHHHHHHcCCCeee
Confidence 334422 3555555555 4789999999975543 23456777888665
No 444
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=45.11 E-value=1.8e+02 Score=28.88 Aligned_cols=85 Identities=14% Similarity=0.144 Sum_probs=41.9
Q ss_pred ccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEE-eCCC-CHHHHHHhhcCCCeEEEEEeCCCCCccccc----cHHHH
Q 013019 246 VPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLV 318 (451)
Q Consensus 246 l~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~-vd~~-D~d~Le~ai~~~~tklV~lesPsNPtG~v~----DL~~I 318 (451)
.+.| |-|++++-.+.....++ ..++..|+...+ +.+. ..+.++...+.. ...||+-+-...||.-. +++++
T Consensus 116 ~~aGvdgviipDLP~ee~~~~~-~~~~~~gi~~I~lv~PtT~~eri~~i~~~a-~gFIY~vS~~GvTG~~~~~~~~~~~~ 193 (263)
T CHL00200 116 SQAGVKGLIIPDLPYEESDYLI-SVCNLYNIELILLIAPTSSKSRIQKIARAA-PGCIYLVSTTGVTGLKTELDKKLKKL 193 (263)
T ss_pred HHcCCeEEEecCCCHHHHHHHH-HHHHHcCCCEEEEECCCCCHHHHHHHHHhC-CCcEEEEcCCCCCCCCccccHHHHHH
Confidence 3444 56777665554433322 345666665443 2332 345555544432 23566544444566532 24555
Q ss_pred HHHHHhc-CCEEEEe
Q 013019 319 SDLCHKK-GAIVCID 332 (451)
Q Consensus 319 aelA~~~-g~~lVVD 332 (451)
.+..+++ +.++++|
T Consensus 194 i~~ir~~t~~Pi~vG 208 (263)
T CHL00200 194 IETIKKMTNKPIILG 208 (263)
T ss_pred HHHHHHhcCCCEEEE
Confidence 5555543 5666665
No 445
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional
Probab=44.69 E-value=2.3e+02 Score=27.89 Aligned_cols=41 Identities=27% Similarity=0.265 Sum_probs=26.6
Q ss_pred ccccccHHHHHHHHHhcCCEEEE--ecCCCCCCccccccCCCcEEEECC
Q 013019 309 FLRCVDVKLVSDLCHKKGAIVCI--DGTFATPLNQKALSLGADLVLHSA 355 (451)
Q Consensus 309 tG~v~DL~~IaelA~~~g~~lVV--D~tfa~~~~~~pl~~GaDiVv~S~ 355 (451)
.|...++.++++.|+++|+.+|. |+. ..++...+|+++...
T Consensus 197 sG~t~~~~~~~~~ak~~g~~ii~IT~~~------~s~la~~ad~~l~~~ 239 (292)
T PRK11337 197 SGRTSDVIEAVELAKKNGAKIICITNSY------HSPIAKLADYVICST 239 (292)
T ss_pred CCCCHHHHHHHHHHHHCCCeEEEEeCCC------CChhHHhCCEEEEcC
Confidence 46666788999999999976543 332 223333478777543
No 446
>PF08423 Rad51: Rad51; InterPro: IPR013632 This domain is found at the C terminus of the DNA repair and recombination protein Rad51. It is critical for DNA binding []. Rad51 is a homologue of the bacterial RecA protein. Rad51 and RecA share a core ATPase domain.; PDB: 2ZUC_A 2Z43_C 2ZUD_B 2DFL_A 2ZUB_A 2BKE_A 2KZ3_A 2CVH_B 2CVF_B 1SZP_D ....
Probab=44.57 E-value=91 Score=30.59 Aligned_cols=39 Identities=15% Similarity=0.249 Sum_probs=26.1
Q ss_pred CCeEEEEEeCCCCCcc-------ccc----c----HHHHHHHHHhcCCEEEEec
Q 013019 295 NNVSLFFTESPTNPFL-------RCV----D----VKLVSDLCHKKGAIVCIDG 333 (451)
Q Consensus 295 ~~tklV~lesPsNPtG-------~v~----D----L~~IaelA~~~g~~lVVD~ 333 (451)
.++++|++.+...+.- ... . +..|..+|+++++.||+=|
T Consensus 132 ~~ikLIVIDSIaalfr~e~~~~~~~~~R~~~L~~~~~~L~~lA~~~~iaVvvTN 185 (256)
T PF08423_consen 132 SKIKLIVIDSIAALFRSEFSGRGDLAERQRMLARLARILKRLARKYNIAVVVTN 185 (256)
T ss_dssp SCEEEEEEETSSHHHHHHSGSTTTHHHHHHHHHHHHHHHHHHHHHTT-EEEEEE
T ss_pred cceEEEEecchHHHHHHHHccchhhHHHHHHHHHHHHHHHHHHHhCCceEEeec
Confidence 4699999999886532 111 1 2347788999998877655
No 447
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=44.41 E-value=3.1e+02 Score=26.64 Aligned_cols=129 Identities=19% Similarity=0.327 Sum_probs=68.4
Q ss_pred HHHHHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEE--eCCCCHHHHHHhhcCCCeEEEEEeCCCCCc--ccc-c
Q 013019 240 VMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPF--LRC-V 313 (451)
Q Consensus 240 ~al~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~--vd~~D~d~Le~ai~~~~tklV~lesPsNPt--G~v-~ 313 (451)
..+..+.+.| |.|.+.-.......+.++ ..+..|++.-. -+.+.++.++..+.+ ..+|.+-+. ||- |.- .
T Consensus 75 ~~i~~fa~agad~It~H~E~~~~~~r~i~-~Ik~~G~kaGv~lnP~Tp~~~i~~~l~~--vD~VllMsV-nPGfgGQ~Fi 150 (220)
T COG0036 75 RYIEAFAKAGADIITFHAEATEHIHRTIQ-LIKELGVKAGLVLNPATPLEALEPVLDD--VDLVLLMSV-NPGFGGQKFI 150 (220)
T ss_pred HHHHHHHHhCCCEEEEEeccCcCHHHHHH-HHHHcCCeEEEEECCCCCHHHHHHHHhh--CCEEEEEeE-CCCCcccccC
Confidence 3445566667 555443333333344443 34556766433 345567888888865 566666443 342 322 1
Q ss_pred -----cHHHHHHHHHhc-CCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH
Q 013019 314 -----DVKLVSDLCHKK-GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH 385 (451)
Q Consensus 314 -----DL~~IaelA~~~-g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~ 385 (451)
.++++.++..+. ++.+-+|.-..........+.|+|++|. |-++...+++.+.++.++.
T Consensus 151 ~~~l~Ki~~lr~~~~~~~~~~IeVDGGI~~~t~~~~~~AGad~~Va-------------GSalF~~~d~~~~i~~~~~ 215 (220)
T COG0036 151 PEVLEKIRELRAMIDERLDILIEVDGGINLETIKQLAAAGADVFVA-------------GSALFGADDYKATIRELRG 215 (220)
T ss_pred HHHHHHHHHHHHHhcccCCeEEEEeCCcCHHHHHHHHHcCCCEEEE-------------EEEEeCCccHHHHHHHHHH
Confidence 245555555433 5678888743322222334579998882 3355555555566655543
No 448
>cd03332 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-binding domain. LMO is a FMN-containing enzyme that catalyzes the conversion of L-lactate and oxygen to acetate, carbon dioxide, and water. LMO is a member of the family of alpha-hydroxy acid oxidases. It is thought to be a homooctamer with two- and four- fold axes in the center of the octamer.
Probab=43.78 E-value=1e+02 Score=32.33 Aligned_cols=87 Identities=18% Similarity=0.090 Sum_probs=56.9
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccc-----cHHHHHHHHHhc--CCEEEEecCC
Q 013019 263 RIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKK--GAIVCIDGTF 335 (451)
Q Consensus 263 ~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~-----DL~~IaelA~~~--g~~lVVD~tf 335 (451)
+..++.+....++++..-...+.++.+.+++.. .+.|++. |.-|+.. .+..|.++.+.. ++.|++|.=.
T Consensus 242 W~~i~~lr~~~~~pvivKgV~~~~dA~~a~~~G-~d~I~vs---nhGGr~~d~~~~t~~~L~ei~~~~~~~~~vi~dGGI 317 (383)
T cd03332 242 WEDLAFLREWTDLPIVLKGILHPDDARRAVEAG-VDGVVVS---NHGGRQVDGSIAALDALPEIVEAVGDRLTVLFDSGV 317 (383)
T ss_pred HHHHHHHHHhcCCCEEEecCCCHHHHHHHHHCC-CCEEEEc---CCCCcCCCCCcCHHHHHHHHHHHhcCCCeEEEeCCc
Confidence 344444444556665544456788888888764 8888884 4445443 466777776654 4999999876
Q ss_pred CCCC-ccccccCCCcEEEE
Q 013019 336 ATPL-NQKALSLGADLVLH 353 (451)
Q Consensus 336 a~~~-~~~pl~~GaDiVv~ 353 (451)
..+. ..+.+.+|+|.|..
T Consensus 318 r~G~Dv~KALaLGA~~v~i 336 (383)
T cd03332 318 RTGADIMKALALGAKAVLI 336 (383)
T ss_pred CcHHHHHHHHHcCCCEEEE
Confidence 5553 34667889997764
No 449
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=43.74 E-value=1.7e+02 Score=30.56 Aligned_cols=53 Identities=9% Similarity=0.196 Sum_probs=35.6
Q ss_pred EeCCCCHHHHHHhhcCCCeEEEEEeCCCCCc--------ccccc----HHHHHHHHHhcCCEEEE
Q 013019 279 VIDPADMEGLEAALNNNNVSLFFTESPTNPF--------LRCVD----VKLVSDLCHKKGAIVCI 331 (451)
Q Consensus 279 ~vd~~D~d~Le~ai~~~~tklV~lesPsNPt--------G~v~D----L~~IaelA~~~g~~lVV 331 (451)
+....+++.+.+.+++.++++|++.+.+... |.... +..|.++++++|+.+++
T Consensus 141 l~~e~~le~I~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 141 LLAETNLEDILASIEELKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred EEccCcHHHHHHHHHhcCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 3455678888888876568999998876432 11222 34578889999977544
No 450
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=43.66 E-value=3.1e+02 Score=27.70 Aligned_cols=105 Identities=10% Similarity=0.091 Sum_probs=53.5
Q ss_pred hhhCCCcEEEeCCHHHHHHHHHHHHccCCC--eEEEcC--CCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCC
Q 013019 221 ALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNN 296 (451)
Q Consensus 221 ~l~gae~~vv~sSG~aAi~~al~all~~GD--~VIv~~--~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~ 296 (451)
++....+.+++-+-+..+...|....+.|. +|++.+ |.+.+ +. +...+...|++++++.- ..+...+.+
T Consensus 111 ~~i~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G-~~-~a~~L~~~gI~vtlI~D---sa~~~~m~~-- 183 (301)
T TIGR00511 111 KRIRDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQG-HI-TAKELRDYGIPVTLIVD---SAVRYFMKE-- 183 (301)
T ss_pred HHcCCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchH-HH-HHHHHHHCCCCEEEEeh---hHHHHHHHh--
Confidence 343333455544434334444454444554 455544 44444 33 33456678999988742 233333432
Q ss_pred eEEEEEeCC-CCCcccccc---HHHHHHHHHhcCCEEEEe
Q 013019 297 VSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 297 tklV~lesP-sNPtG~v~D---L~~IaelA~~~g~~lVVD 332 (451)
+..|++..= --..|.+.. --.++-+|+.+++++++=
T Consensus 184 vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~ 223 (301)
T TIGR00511 184 VDHVVVGADAITANGALINKIGTSQLALAAREARVPFMVA 223 (301)
T ss_pred CCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEE
Confidence 444554211 012344433 246777889999987764
No 451
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=43.28 E-value=1.3e+02 Score=33.16 Aligned_cols=107 Identities=18% Similarity=0.202 Sum_probs=62.2
Q ss_pred CCcEEEeCCHH-HHHHHHHHH-HccCCCe----EEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeE
Q 013019 225 AESTVIMASGM-SASTVMLLA-LVPAGGH----IVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVS 298 (451)
Q Consensus 225 ae~~vv~sSG~-aAi~~al~a-ll~~GD~----VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tk 298 (451)
.+-++++++|. +++.+++.. ..+.... |-..+..+ .-..+.+..+..+|.+.+.+ ....+++.+++.+ -
T Consensus 231 vpvg~~lSGGlDSS~Iaa~a~~~~~~~~~~~fsvg~~~~~~-~D~~~a~~~A~~lg~~h~~~-~~~~~e~~~~~~~---v 305 (542)
T COG0367 231 VPVGVFLSGGLDSSLIAAIAAEELGKEGKTTFTVGFEDSDS-PDAKYARAVAKFLGTPHHEI-ILTNEELLNALPE---V 305 (542)
T ss_pred CcEEEEeCCCccHHHHHHHHHHhccccceeeeEeecCCCCC-chHHHHHHHHHHhCCCcEEE-eecHHHHHHHHHH---H
Confidence 35677788888 544444443 3322221 22222211 13344555666777643322 2346777777643 2
Q ss_pred EEEEeCCCCCccccccHHHHHHHHHhcCCEEEE-----ecCCCC
Q 013019 299 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI-----DGTFAT 337 (451)
Q Consensus 299 lV~lesPsNPtG~v~DL~~IaelA~~~g~~lVV-----D~tfa~ 337 (451)
+..++.|.. .....++-.+++.+++++..++. ||.|+.
T Consensus 306 v~~~~~p~~-~~~~~ply~~~~~a~~~g~kVvLSGeGADElFgG 348 (542)
T COG0367 306 VKALDTPGG-MAASIPLYLLSRKARAEGEKVVLSGEGADELFGG 348 (542)
T ss_pred HhhcCCCCc-ccchhHHHHHHHhhhhcCcEEeecCccHHHHhcC
Confidence 456677775 66667888999999999988887 555654
No 452
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed
Probab=42.25 E-value=1.1e+02 Score=32.90 Aligned_cols=113 Identities=19% Similarity=0.167 Sum_probs=64.5
Q ss_pred HHHHHHccCCCeEEEcCCCCcchH---HHHHHhhhcC-CcEEEEeCCCCHHHHHHhhcCCCeEEEEEe-CCC-CCccc--
Q 013019 240 VMLLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPT-NPFLR-- 311 (451)
Q Consensus 240 ~al~all~~GD~VIv~~~~Y~~t~---~~l~~~l~~~-Gi~v~~vd~~D~d~Le~ai~~~~tklV~le-sPs-NPtG~-- 311 (451)
..+.+++..|-.+++.+..++... ..++.+...+ ++.+..-+..+.++.+.+++-. ...|-+. .|. +-+++
T Consensus 231 e~a~~L~~agvdvivvD~a~g~~~~vl~~i~~i~~~~p~~~vi~g~v~t~e~a~~l~~aG-ad~i~vg~g~gs~~~~r~~ 309 (486)
T PRK05567 231 ERAEALVEAGVDVLVVDTAHGHSEGVLDRVREIKAKYPDVQIIAGNVATAEAARALIEAG-ADAVKVGIGPGSICTTRIV 309 (486)
T ss_pred HHHHHHHHhCCCEEEEECCCCcchhHHHHHHHHHhhCCCCCEEEeccCCHHHHHHHHHcC-CCEEEECCCCCccccceee
Confidence 334456666755666665555432 2333333344 5555555666788777777643 5566431 232 11222
Q ss_pred ----cccHHHH---HHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEE
Q 013019 312 ----CVDVKLV---SDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLH 353 (451)
Q Consensus 312 ----v~DL~~I---aelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~ 353 (451)
+.++..| ++.+++.++++|.|.=..++. ..+.+.+|||.|+-
T Consensus 310 ~~~g~p~~~~~~~~~~~~~~~~~~viadGGi~~~~di~kAla~GA~~v~~ 359 (486)
T PRK05567 310 AGVGVPQITAIADAAEAAKKYGIPVIADGGIRYSGDIAKALAAGASAVML 359 (486)
T ss_pred cCCCcCHHHHHHHHHHHhccCCCeEEEcCCCCCHHHHHHHHHhCCCEEEE
Confidence 2234444 555556799999998765542 35677889997763
No 453
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=42.20 E-value=2.6e+02 Score=27.21 Aligned_cols=99 Identities=14% Similarity=0.030 Sum_probs=59.5
Q ss_pred EEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC---C--------CCHHHHHHhhc---C
Q 013019 229 VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID---P--------ADMEGLEAALN---N 294 (451)
Q Consensus 229 vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd---~--------~D~d~Le~ai~---~ 294 (451)
+-.++.+.|+..++.++ . -.+|-+-.|.-...-..+...+...|+++.-.. . .+++.+.+++. .
T Consensus 102 ~p~tt~~~A~~~AL~al-g-~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~ 179 (239)
T TIGR02990 102 TPVVTPSSAAVDGLAAL-G-VRRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFD 179 (239)
T ss_pred CCeeCHHHHHHHHHHHc-C-CCEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcC
Confidence 44556677887888777 2 246666666444444555567788898876542 1 25666666664 2
Q ss_pred CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC
Q 013019 295 NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 295 ~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t 334 (451)
.+..+||+. -+| +--++-|.++=++.|.+|+.=|.
T Consensus 180 ~~aDAifis-CTn----Lrt~~vi~~lE~~lGkPVlsSNq 214 (239)
T TIGR02990 180 PDADALFLS-CTA----LRAATCAQRIEQAIGKPVVTSNQ 214 (239)
T ss_pred CCCCEEEEe-CCC----chhHHHHHHHHHHHCCCEEEHHH
Confidence 247788884 232 22244555555678888866554
No 454
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=41.90 E-value=41 Score=27.58 Aligned_cols=79 Identities=16% Similarity=0.141 Sum_probs=43.6
Q ss_pred HHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe----CCC-CHH---HHHHhhcCCCeEEEEEeCCCCCccccc-
Q 013019 243 LALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI----DPA-DME---GLEAALNNNNVSLFFTESPTNPFLRCV- 313 (451)
Q Consensus 243 ~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v----d~~-D~d---~Le~ai~~~~tklV~lesPsNPtG~v~- 313 (451)
..|..-|=+|+.+. +|..++ +..|+++..+ ... .++ ++.+.++..++.+|+. +|..-.....
T Consensus 7 ~~l~~lG~~i~AT~----gTa~~L----~~~Gi~~~~v~~~~~~~~~~~g~~~i~~~i~~~~IdlVIn-~~~~~~~~~~~ 77 (95)
T PF02142_consen 7 KRLAELGFEIYATE----GTAKFL----KEHGIEVTEVVNKIGEGESPDGRVQIMDLIKNGKIDLVIN-TPYPFSDQEHT 77 (95)
T ss_dssp HHHHHTTSEEEEEH----HHHHHH----HHTT--EEECCEEHSTG-GGTHCHHHHHHHHTTSEEEEEE-E--THHHHHTH
T ss_pred HHHHHCCCEEEECh----HHHHHH----HHcCCCceeeeeecccCccCCchhHHHHHHHcCCeEEEEE-eCCCCcccccC
Confidence 34555566666643 555443 4567773222 222 112 2666777766886654 5553333333
Q ss_pred cHHHHHHHHHhcCCEEE
Q 013019 314 DVKLVSDLCHKKGAIVC 330 (451)
Q Consensus 314 DL~~IaelA~~~g~~lV 330 (451)
|-..|.+.|-++|++++
T Consensus 78 dg~~irr~a~~~~Ip~~ 94 (95)
T PF02142_consen 78 DGYKIRRAAVEYNIPLF 94 (95)
T ss_dssp HHHHHHHHHHHTTSHEE
T ss_pred CcHHHHHHHHHcCCCCc
Confidence 77889999999998765
No 455
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=41.62 E-value=3.2e+02 Score=27.71 Aligned_cols=105 Identities=10% Similarity=0.118 Sum_probs=53.8
Q ss_pred hhhCCCcEEEeCCHHHHHHHHHHHHccCCC--eEEEcC--CCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCC
Q 013019 221 ALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNN 296 (451)
Q Consensus 221 ~l~gae~~vv~sSG~aAi~~al~all~~GD--~VIv~~--~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~ 296 (451)
++....+.+++-+-+..+...|....+.|. +|++.+ |...+ + .+...+...|++++++.- ..+-..+.+
T Consensus 116 ~~i~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G-~-~~a~~L~~~GI~vtlI~D---sav~~~m~~-- 188 (310)
T PRK08535 116 KRIRDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQG-H-ITAKELAEYGIPVTLIVD---SAVRYFMKD-- 188 (310)
T ss_pred HHcCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhH-H-HHHHHHHHCCCCEEEEeh---hHHHHHHHh--
Confidence 343333455554434444444454444453 456554 33333 3 333456677999988653 233333432
Q ss_pred eEEEEEeCC-CCCcccccc---HHHHHHHHHhcCCEEEEe
Q 013019 297 VSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 297 tklV~lesP-sNPtG~v~D---L~~IaelA~~~g~~lVVD 332 (451)
+..|++..= --..|.+.. --.++-+|+.+++++++=
T Consensus 189 vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~ 228 (310)
T PRK08535 189 VDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVA 228 (310)
T ss_pred CCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEe
Confidence 445555211 112344443 246777889999988764
No 456
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=41.46 E-value=1.4e+02 Score=31.91 Aligned_cols=90 Identities=13% Similarity=0.198 Sum_probs=53.2
Q ss_pred ccCCCeE-EEcCCCCcc-hHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHH
Q 013019 246 VPAGGHI-VTTTDCYRK-TRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH 323 (451)
Q Consensus 246 l~~GD~V-Iv~~~~Y~~-t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~ 323 (451)
...|.+| ++..+.|.. ....+...+...|+.+.. ..++..+.+.+...+..+|++.++..+.-....++++.++.+
T Consensus 249 ~~~G~~V~Lit~Dt~R~aA~eQLk~yAe~lgvp~~~--~~~~~~l~~~l~~~~~D~VLIDTaGr~~rd~~~l~eL~~~~~ 326 (432)
T PRK12724 249 LHMGKSVSLYTTDNYRIAAIEQLKRYADTMGMPFYP--VKDIKKFKETLARDGSELILIDTAGYSHRNLEQLERMQSFYS 326 (432)
T ss_pred HhcCCeEEEecccchhhhHHHHHHHHHHhcCCCeee--hHHHHHHHHHHHhCCCCEEEEeCCCCCccCHHHHHHHHHHHH
Confidence 4566655 444455544 233344445666765532 223455555554334689999998755444556777777665
Q ss_pred h------cCCEEEEecCCCC
Q 013019 324 K------KGAIVCIDGTFAT 337 (451)
Q Consensus 324 ~------~g~~lVVD~tfa~ 337 (451)
. ...+||+|.+...
T Consensus 327 ~~~~~~~~e~~LVLsAt~~~ 346 (432)
T PRK12724 327 CFGEKDSVENLLVLSSTSSY 346 (432)
T ss_pred hhcCCCCCeEEEEEeCCCCH
Confidence 3 2578999998654
No 457
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated
Probab=41.14 E-value=1.4e+02 Score=31.73 Aligned_cols=112 Identities=15% Similarity=0.131 Sum_probs=64.2
Q ss_pred HHHHHHccCCCeEEEcCCCCcchH---HHHHHhhhcC-CcEEEEeCCCCHHHHHHhhcCCCeEEEEEe-CCCC------C
Q 013019 240 VMLLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------P 308 (451)
Q Consensus 240 ~al~all~~GD~VIv~~~~Y~~t~---~~l~~~l~~~-Gi~v~~vd~~D~d~Le~ai~~~~tklV~le-sPsN------P 308 (451)
.-+..++..|=.||+-+..++... ..++.+-..+ ++.+..-+..+.++.+.+++-. ...|.+. .|.. .
T Consensus 156 ~~v~~lv~aGvDvI~iD~a~g~~~~~~~~v~~ik~~~p~~~vi~g~V~T~e~a~~l~~aG-aD~I~vG~g~Gs~c~tr~~ 234 (404)
T PRK06843 156 ERVEELVKAHVDILVIDSAHGHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLISVG-ADCLKVGIGPGSICTTRIV 234 (404)
T ss_pred HHHHHHHhcCCCEEEEECCCCCChhHHHHHHHHHhhCCCCcEEEEecCCHHHHHHHHHcC-CCEEEECCCCCcCCcceee
Confidence 344567777866666566665322 2333332233 3444333566777777777643 5566542 2321 1
Q ss_pred ccc-cc---cHHHHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEE
Q 013019 309 FLR-CV---DVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (451)
Q Consensus 309 tG~-v~---DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv 352 (451)
+|. .. .+..+.+++++.+++||.|.=+.++ -..+.+.+|||.|+
T Consensus 235 ~g~g~p~ltai~~v~~~~~~~~vpVIAdGGI~~~~Di~KALalGA~aVm 283 (404)
T PRK06843 235 AGVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 (404)
T ss_pred cCCCCChHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 221 12 3445677777889999999976554 33567788998766
No 458
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase. This model describes a rather tightly conserved cluster of IMP dehydrogenase sequences, many of which are characterized. The model excludes two related families of proteins proposed also to be IMP dehydrogenases, but without characterized members. These are related families are the subject of separate models.
Probab=40.91 E-value=1.4e+02 Score=31.98 Aligned_cols=109 Identities=21% Similarity=0.189 Sum_probs=65.9
Q ss_pred HHHccCCCeEEEcCCCCcchHHHHH---HhhhcC-CcEEEEeCCCCHHHHHHhhcCCCeEEEEEe-CCCC--Cc------
Q 013019 243 LALVPAGGHIVTTTDCYRKTRIFIE---TVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN--PF------ 309 (451)
Q Consensus 243 ~all~~GD~VIv~~~~Y~~t~~~l~---~~l~~~-Gi~v~~vd~~D~d~Le~ai~~~~tklV~le-sPsN--Pt------ 309 (451)
..+...|-.+|+-+..++.....++ .+-+.+ .+.+..-+..+.++.+.+++-. ...|-+. .|.. .|
T Consensus 230 ~~L~~aG~d~I~vd~a~g~~~~~~~~i~~i~~~~~~~~vi~G~v~t~~~a~~l~~aG-ad~i~vg~g~G~~~~t~~~~~~ 308 (450)
T TIGR01302 230 EALVKAGVDVIVIDSSHGHSIYVIDSIKEIKKTYPDLDIIAGNVATAEQAKALIDAG-ADGLRVGIGPGSICTTRIVAGV 308 (450)
T ss_pred HHHHHhCCCEEEEECCCCcHhHHHHHHHHHHHhCCCCCEEEEeCCCHHHHHHHHHhC-CCEEEECCCCCcCCccceecCC
Confidence 3566777667777777765443332 222232 3444433566788888887654 6677553 2321 11
Q ss_pred cc--cccHHHHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEE
Q 013019 310 LR--CVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (451)
Q Consensus 310 G~--v~DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv 352 (451)
|. ...+.++.+.|+++++++|.|.=..++ -..+.+.+|||.|+
T Consensus 309 g~p~~~~i~~~~~~~~~~~vpviadGGi~~~~di~kAla~GA~~V~ 354 (450)
T TIGR01302 309 GVPQITAVYDVAEYAAQSGIPVIADGGIRYSGDIVKALAAGADAVM 354 (450)
T ss_pred CccHHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 11 112466777788899999999865554 23567888999776
No 459
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=40.70 E-value=1.5e+02 Score=30.21 Aligned_cols=36 Identities=19% Similarity=0.149 Sum_probs=27.4
Q ss_pred EEEEEeCCCCCcccccc-HHHHHHHHHhcCCEEEEecC
Q 013019 298 SLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 298 klV~lesPsNPtG~v~D-L~~IaelA~~~g~~lVVD~t 334 (451)
.+|++ +-+=|-|...| ..+|.++|++.|+.+++|.+
T Consensus 131 d~Vvl-sGSlP~g~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 131 DIVVL-SGSLPPGVPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred CEEEE-eCCCCCCCCHHHHHHHHHHHHhcCCeEEEECC
Confidence 45555 34445565554 78999999999999999997
No 460
>PRK04296 thymidine kinase; Provisional
Probab=40.41 E-value=1e+02 Score=28.60 Aligned_cols=89 Identities=10% Similarity=0.122 Sum_probs=45.2
Q ss_pred HHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhc--CCCeEEEEEeCCCCCccccccHHHHHH
Q 013019 243 LALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALN--NNNVSLFFTESPTNPFLRCVDVKLVSD 320 (451)
Q Consensus 243 ~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~--~~~tklV~lesPsNPtG~v~DL~~Iae 320 (451)
..+...|.+|++..+.+.... ....++.++|+++........+++.+.+. +.+..+|++...+. .....+.++.+
T Consensus 24 ~~~~~~g~~v~i~k~~~d~~~-~~~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~dvviIDEaq~--l~~~~v~~l~~ 100 (190)
T PRK04296 24 YNYEERGMKVLVFKPAIDDRY-GEGKVVSRIGLSREAIPVSSDTDIFELIEEEGEKIDCVLIDEAQF--LDKEQVVQLAE 100 (190)
T ss_pred HHHHHcCCeEEEEeccccccc-cCCcEecCCCCcccceEeCChHHHHHHHHhhCCCCCEEEEEcccc--CCHHHHHHHHH
Confidence 334456878777654332211 12234555665543221223333333332 22367888876642 11122556777
Q ss_pred HHHhcCCEEEEecC
Q 013019 321 LCHKKGAIVCIDGT 334 (451)
Q Consensus 321 lA~~~g~~lVVD~t 334 (451)
.++..|+.+++=.-
T Consensus 101 ~l~~~g~~vi~tgl 114 (190)
T PRK04296 101 VLDDLGIPVICYGL 114 (190)
T ss_pred HHHHcCCeEEEEec
Confidence 77778988777543
No 461
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=40.34 E-value=2.3e+02 Score=26.01 Aligned_cols=107 Identities=17% Similarity=0.073 Sum_probs=56.7
Q ss_pred HHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEE--eCCCCHHHHHHhhcCCCeEEEEEeCCCCCcc---ccccHHH
Q 013019 244 ALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPFL---RCVDVKL 317 (451)
Q Consensus 244 all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~--vd~~D~d~Le~ai~~~~tklV~lesPsNPtG---~v~DL~~ 317 (451)
.+.+.| |.|+++..........+-..++..|+.+-. ....+++++.+++... ...|.+ .|.-..+ .....+.
T Consensus 72 ~~~~aGad~i~~h~~~~~~~~~~~i~~~~~~g~~~~v~~~~~~t~~e~~~~~~~~-~d~v~~-~~~~~~~~~~~~~~~~~ 149 (202)
T cd04726 72 MAFKAGADIVTVLGAAPLSTIKKAVKAAKKYGKEVQVDLIGVEDPEKRAKLLKLG-VDIVIL-HRGIDAQAAGGWWPEDD 149 (202)
T ss_pred HHHhcCCCEEEEEeeCCHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHCC-CCEEEE-cCcccccccCCCCCHHH
Confidence 333444 666665433221122222345566777654 4566777766666533 555555 3432222 2345677
Q ss_pred HHHHHHhcCCEEEEecCCCCCCccccccCCCcEEE
Q 013019 318 VSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVL 352 (451)
Q Consensus 318 IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv 352 (451)
+.++.+..++++++|.=....-....++.|+|.++
T Consensus 150 i~~~~~~~~~~i~~~GGI~~~~i~~~~~~Gad~vv 184 (202)
T cd04726 150 LKKVKKLLGVKVAVAGGITPDTLPEFKKAGADIVI 184 (202)
T ss_pred HHHHHhhcCCCEEEECCcCHHHHHHHHhcCCCEEE
Confidence 77777657888999864321112233456888665
No 462
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=40.33 E-value=22 Score=34.50 Aligned_cols=30 Identities=30% Similarity=0.292 Sum_probs=26.5
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
..-.|...|+++|++.||++|+.||+|-++
T Consensus 45 d~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 45 DPRFGTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp STTTBHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred ccccchhhhhhhhhhccccccceEEEeeec
Confidence 444788889999999999999999999984
No 463
>PRK13307 bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional
Probab=39.44 E-value=2.9e+02 Score=29.18 Aligned_cols=109 Identities=15% Similarity=0.051 Sum_probs=52.8
Q ss_pred HHHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEE--eCCCCH-HHHHHhhcCCCeEEEEEeCCCCCccccccHHH
Q 013019 242 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADM-EGLEAALNNNNVSLFFTESPTNPFLRCVDVKL 317 (451)
Q Consensus 242 l~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~--vd~~D~-d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~ 317 (451)
+..+.+.| |.+.+....-..+....-...+..|+.+-. +.+.++ +.++.. .. .+..|.+-+-.+|.+.-..++.
T Consensus 243 v~~~a~aGAD~vTVH~ea~~~ti~~ai~~akk~GikvgVD~lnp~tp~e~i~~l-~~-~vD~Vllht~vdp~~~~~~~~k 320 (391)
T PRK13307 243 ARMAADATADAVVISGLAPISTIEKAIHEAQKTGIYSILDMLNVEDPVKLLESL-KV-KPDVVELHRGIDEEGTEHAWGN 320 (391)
T ss_pred HHHHHhcCCCEEEEeccCCHHHHHHHHHHHHHcCCEEEEEEcCCCCHHHHHHHh-hC-CCCEEEEccccCCCcccchHHH
Confidence 33445555 555553221111222222446677877543 233344 444443 33 2566766554445433333445
Q ss_pred HHHHHH-hcCCEEEEecCCCCCCccccccCCCcEEE
Q 013019 318 VSDLCH-KKGAIVCIDGTFATPLNQKALSLGADLVL 352 (451)
Q Consensus 318 IaelA~-~~g~~lVVD~tfa~~~~~~pl~~GaDiVv 352 (451)
|.++.+ ..++.+.+|.=....-.....+.|+|+++
T Consensus 321 I~~ikk~~~~~~I~VdGGI~~eti~~l~~aGADivV 356 (391)
T PRK13307 321 IKEIKKAGGKILVAVAGGVRVENVEEALKAGADILV 356 (391)
T ss_pred HHHHHHhCCCCcEEEECCcCHHHHHHHHHcCCCEEE
Confidence 544433 24678999974332212233467899776
No 464
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=38.39 E-value=1.1e+02 Score=25.01 Aligned_cols=62 Identities=15% Similarity=0.062 Sum_probs=40.3
Q ss_pred HHHHhhhcCCcEEEEe--C-CCCH--HHHHHhhcCCCeEEEEEeCCCCCcccc--ccHHHHHHHHHhcCCEEEEec
Q 013019 265 FIETVLPKMGITATVI--D-PADM--EGLEAALNNNNVSLFFTESPTNPFLRC--VDVKLVSDLCHKKGAIVCIDG 333 (451)
Q Consensus 265 ~l~~~l~~~Gi~v~~v--d-~~D~--d~Le~ai~~~~tklV~lesPsNPtG~v--~DL~~IaelA~~~g~~lVVD~ 333 (451)
.+...++..|.+..+. + .... ..|+..+.+ +.+|++- |..+ .-...+.+.|+++|++++.=.
T Consensus 14 ~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~--aD~VIv~-----t~~vsH~~~~~vk~~akk~~ip~~~~~ 82 (97)
T PF10087_consen 14 RYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKK--ADLVIVF-----TDYVSHNAMWKVKKAAKKYGIPIIYSR 82 (97)
T ss_pred HHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCC--CCEEEEE-----eCCcChHHHHHHHHHHHHcCCcEEEEC
Confidence 3456678889998887 2 2222 247777754 5677662 2222 236788999999999887644
No 465
>PRK13937 phosphoheptose isomerase; Provisional
Probab=37.95 E-value=2.1e+02 Score=26.50 Aligned_cols=41 Identities=10% Similarity=-0.122 Sum_probs=27.4
Q ss_pred ccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEE
Q 013019 309 FLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 309 tG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
.|...++-++.+.|+++|+.+|.=-. ....++...+|+++.
T Consensus 116 sG~t~~~~~~~~~ak~~g~~~I~iT~----~~~s~L~~~ad~~l~ 156 (188)
T PRK13937 116 SGNSPNVLAALEKARELGMKTIGLTG----RDGGKMKELCDHLLI 156 (188)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEEeC----CCCChhHHhCCEEEE
Confidence 47778899999999999988765322 223344434676664
No 466
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=37.81 E-value=2.1e+02 Score=30.03 Aligned_cols=76 Identities=16% Similarity=0.159 Sum_probs=44.5
Q ss_pred cCCCeEEEcCCCCcchH-----HHHHHhhhcCCcEEEE-eC---CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHH
Q 013019 247 PAGGHIVTTTDCYRKTR-----IFIETVLPKMGITATV-ID---PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKL 317 (451)
Q Consensus 247 ~~GD~VIv~~~~Y~~t~-----~~l~~~l~~~Gi~v~~-vd---~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~ 317 (451)
++||.|+.+.+...+.. .+++..+.+.|+++.. +. ..+.++|+..++--+++.++ |. .|....+.+
T Consensus 317 ~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~i---pv--Hge~~~~~~ 391 (422)
T TIGR00649 317 RKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSGHASQEDHKLLLRLLKPKYII---PV--HGEYRMLIN 391 (422)
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecCCCCHHHHHHHHHHhCCCEEE---ec--CCcHHHHHH
Confidence 37888888876666644 2222145567776533 11 23455665555422345444 22 367667888
Q ss_pred HHHHHHhcCC
Q 013019 318 VSDLCHKKGA 327 (451)
Q Consensus 318 IaelA~~~g~ 327 (451)
.++++++.|+
T Consensus 392 ~~~~a~~~g~ 401 (422)
T TIGR00649 392 HTKLAEEEGY 401 (422)
T ss_pred HHHHHHHcCC
Confidence 8888888775
No 467
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=37.76 E-value=2.5e+02 Score=26.54 Aligned_cols=44 Identities=9% Similarity=-0.007 Sum_probs=29.2
Q ss_pred HHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC
Q 013019 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 286 d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t 334 (451)
..++...++++ -+|++ + ..|...++-.++++|+++|+.+|.=-.
T Consensus 101 ~ql~~~~~~gD-vli~i-S---~SG~s~~v~~a~~~Ak~~G~~vI~IT~ 144 (196)
T PRK10886 101 KQVRALGHAGD-VLLAI-S---TRGNSRDIVKAVEAAVTRDMTIVALTG 144 (196)
T ss_pred HHHHHcCCCCC-EEEEE-e---CCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 34555555542 23333 2 357778899999999999999876443
No 468
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=37.63 E-value=3.1e+02 Score=27.01 Aligned_cols=89 Identities=20% Similarity=0.193 Sum_probs=50.7
Q ss_pred hcCCcEEEEeCC-C-CHHHHHHhhc----CCCeEEEEEeC-C-CC-Cc-cccccHHHHHHHHHhcCCEEEEecCCCCCC-
Q 013019 271 PKMGITATVIDP-A-DMEGLEAALN----NNNVSLFFTES-P-TN-PF-LRCVDVKLVSDLCHKKGAIVCIDGTFATPL- 339 (451)
Q Consensus 271 ~~~Gi~v~~vd~-~-D~d~Le~ai~----~~~tklV~les-P-sN-Pt-G~v~DL~~IaelA~~~g~~lVVD~tfa~~~- 339 (451)
...|..+.+-.. . ++++++.+++ ..+..+++++. . +- |+ -...|+..|..+.+..+.+|++|.++..+.
T Consensus 129 a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G~r 208 (260)
T TIGR01361 129 GKQGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAGRR 208 (260)
T ss_pred hcCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCCcc
Confidence 344554443222 1 4555544442 22245677664 2 21 32 345789999999888899999999876551
Q ss_pred ------ccccccCCCcEE-E--E-CCcccC
Q 013019 340 ------NQKALSLGADLV-L--H-SATKFI 359 (451)
Q Consensus 340 ------~~~pl~~GaDiV-v--~-S~SK~l 359 (451)
......+|+|-+ + | +..|.+
T Consensus 209 ~~~~~~~~aAva~Ga~gl~iE~H~t~d~a~ 238 (260)
T TIGR01361 209 DLVIPLAKAAIAAGADGLMIEVHPDPEKAL 238 (260)
T ss_pred chHHHHHHHHHHcCCCEEEEEeCCCccccC
Confidence 123446788832 2 2 455655
No 469
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=37.62 E-value=2.7e+02 Score=27.41 Aligned_cols=108 Identities=15% Similarity=0.158 Sum_probs=49.4
Q ss_pred HHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEE-EeCC-CCHHHHHHhhcCCCeEEEEEeCCCCCcccc----ccH
Q 013019 243 LALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITAT-VIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRC----VDV 315 (451)
Q Consensus 243 ~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~-~vd~-~D~d~Le~ai~~~~tklV~lesPsNPtG~v----~DL 315 (451)
..+.+.| |.|++++-.+.....++ ..++..|+... .+.+ .+.+.++...+.. ...|++-+.+..||.- .++
T Consensus 109 ~~~~~aGvdgviipDlp~ee~~~~~-~~~~~~gl~~i~lv~P~T~~eri~~i~~~~-~gfiy~vs~~G~TG~~~~~~~~~ 186 (256)
T TIGR00262 109 AKCKEVGVDGVLVADLPLEESGDLV-EAAKKHGVKPIFLVAPNADDERLKQIAEKS-QGFVYLVSRAGVTGARNRAASAL 186 (256)
T ss_pred HHHHHcCCCEEEECCCChHHHHHHH-HHHHHCCCcEEEEECCCCCHHHHHHHHHhC-CCCEEEEECCCCCCCcccCChhH
Confidence 3344444 56777765553322222 34566676644 3333 3455665555432 2255554444556642 133
Q ss_pred HHHHHHHHh-cCCEEEEecCCCCCC-ccccccCCCcEEE
Q 013019 316 KLVSDLCHK-KGAIVCIDGTFATPL-NQKALSLGADLVL 352 (451)
Q Consensus 316 ~~IaelA~~-~g~~lVVD~tfa~~~-~~~pl~~GaDiVv 352 (451)
.+..+..++ .+.++++|-=..++- .....+.|+|.++
T Consensus 187 ~~~i~~lr~~~~~pi~vgfGI~~~e~~~~~~~~GADgvV 225 (256)
T TIGR00262 187 NELVKRLKAYSAKPVLVGFGISKPEQVKQAIDAGADGVI 225 (256)
T ss_pred HHHHHHHHhhcCCCEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 333333333 356666664333221 1223345666443
No 470
>PLN00191 enolase
Probab=37.58 E-value=2.2e+02 Score=30.71 Aligned_cols=97 Identities=7% Similarity=-0.007 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC--CCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 234 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 234 G~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
..+++.. +..++.+-+-+.+.+|.....+..+..+.+...+.+..-|. .+++.+++.++.+-...|.+- .|..|.
T Consensus 297 ~~e~i~~-~~~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~iK--l~qiGG 373 (457)
T PLN00191 297 GDELIDL-YKEFVSDYPIVSIEDPFDQDDWEHWAKLTSLEDVQIVGDDLLVTNPKRVAKAIQEKACNALLLK--VNQIGT 373 (457)
T ss_pred HHHHHHH-HHHHhhcCCcEEEECCCCcccHHHHHHHHccCCCcEEccCcccCCHHHHHHHHHhCCCCEEEec--ccccCC
Confidence 3344433 34455545567788888776666665554554555443332 468888888876545566653 346888
Q ss_pred cccHHHHHHHHHhcCCEEEEec
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDG 333 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~ 333 (451)
+.+..+++++|+++|+.+++-.
T Consensus 374 ITea~~~a~lA~~~G~~~~ish 395 (457)
T PLN00191 374 VTESIEAVKMSKAAGWGVMTSH 395 (457)
T ss_pred HHHHHHHHHHHHHCCCEEEeCC
Confidence 9999999999999999988754
No 471
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=37.35 E-value=4e+02 Score=25.92 Aligned_cols=146 Identities=18% Similarity=0.243 Sum_probs=86.7
Q ss_pred EEEeCCHHHHHHHHHHHHccCCCeEEE-----cCCC--C---cchHHHHHHhhhcCCcEEEEeCCC-----CHHHHHHhh
Q 013019 228 TVIMASGMSASTVMLLALVPAGGHIVT-----TTDC--Y---RKTRIFIETVLPKMGITATVIDPA-----DMEGLEAAL 292 (451)
Q Consensus 228 ~vv~sSG~aAi~~al~all~~GD~VIv-----~~~~--Y---~~t~~~l~~~l~~~Gi~v~~vd~~-----D~d~Le~ai 292 (451)
+.++++|--...++..++ +.|.+|.. +... | .....+.....+.+|+++...+.. ..++|.+++
T Consensus 4 ~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~l 82 (223)
T COG2102 4 IALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEAL 82 (223)
T ss_pred EEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHHH
Confidence 556777777776666554 55654322 2111 2 123445555567789887766532 467888888
Q ss_pred cCCCeEEEEEeCCCCCccccc---cHHHHHHHHHhcCCEEEEecCCCCCCccc-------cccCCCcEEEECCcccCCcc
Q 013019 293 NNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQK-------ALSLGADLVLHSATKFIGGH 362 (451)
Q Consensus 293 ~~~~tklV~lesPsNPtG~v~---DL~~IaelA~~~g~~lVVD~tfa~~~~~~-------pl~~GaDiVv~S~SK~l~G~ 362 (451)
+.-+...|+. |.+. -...+-.+|++.|+.++ ...+..+ ....|.++++.+.+|.--+-
T Consensus 83 ~~l~~d~iv~-------GaI~s~yqk~rve~lc~~lGl~~~-----~PLWg~d~~ell~e~~~~Gf~~~Iv~Vsa~gL~~ 150 (223)
T COG2102 83 RRLKVDGIVA-------GAIASEYQKERVERLCEELGLKVY-----APLWGRDPEELLEEMVEAGFEAIIVAVSAEGLDE 150 (223)
T ss_pred HhCcccEEEE-------chhhhHHHHHHHHHHHHHhCCEEe-----ecccCCCHHHHHHHHHHcCCeEEEEEEeccCCCh
Confidence 7643446653 6664 36789999999998774 2222222 23568888888877764332
Q ss_pred ccceeEEEEeCHHHHHHHHHHhHhhCC
Q 013019 363 NDVLAGSISGSGKLVTQIRNLHHVLGG 389 (451)
Q Consensus 363 gdv~gG~Iv~~~eli~~lr~~~~~~G~ 389 (451)
. -.|.- .+.+.+++++.....+|.
T Consensus 151 ~--~lGr~-i~~~~~e~l~~l~~~ygi 174 (223)
T COG2102 151 S--WLGRR-IDREFLEELKSLNRRYGI 174 (223)
T ss_pred H--HhCCc-cCHHHHHHHHHHHHhcCC
Confidence 2 13332 355778888877555553
No 472
>TIGR00268 conserved hypothetical protein TIGR00268. The N-terminal region of the model shows similarity to Argininosuccinate synthase proteins using PSI-blast and using the recognize protein identification server.
Probab=37.29 E-value=3.3e+02 Score=26.42 Aligned_cols=110 Identities=13% Similarity=0.189 Sum_probs=59.0
Q ss_pred HHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcc----hHHHHHHhhhcCCcEEEEeCCCCHHHH
Q 013019 213 VVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRK----TRIFIETVLPKMGITATVIDPADMEGL 288 (451)
Q Consensus 213 ~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~----t~~~l~~~l~~~Gi~v~~vd~~D~d~L 288 (451)
+.|++.|.+. ..-.+.+++|.-...++..+ .+.|.+|+.-.-.++. ........++.+|++...++.. .+
T Consensus 3 ~~l~~~l~~~--~~vlVa~SGGvDSs~ll~la-~~~g~~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~ii~~~---~~ 76 (252)
T TIGR00268 3 ENLRNFLKEF--KKVLIAYSGGVDSSLLAAVC-SDAGTEVLAITVVSPSISPRELEDAIIIAKEIGVNHEFVKID---KM 76 (252)
T ss_pred HHHHHHHHhc--CCEEEEecCcHHHHHHHHHH-HHhCCCEEEEEecCCCCCHHHHHHHHHHHHHcCCCEEEEEcH---HH
Confidence 3455555543 23467788888443333322 2236665544333332 2334456678889988777652 22
Q ss_pred HHhhcCCCeEEEEEeCCCCCcccc--ccHHHHHHHHHhcCCEEEEecCCCC
Q 013019 289 EAALNNNNVSLFFTESPTNPFLRC--VDVKLVSDLCHKKGAIVCIDGTFAT 337 (451)
Q Consensus 289 e~ai~~~~tklV~lesPsNPtG~v--~DL~~IaelA~~~g~~lVVD~tfa~ 337 (451)
...+.. ++.++.-.+ .=...+.++|+++|+.+|+|.+...
T Consensus 77 ~~~~~~---------n~~~~c~~ck~~~~~~l~~~A~~~g~~~I~~G~n~d 118 (252)
T TIGR00268 77 INPFRA---------NVEERCYFCKKMVLSILVKEAEKRGYDVVVDGTNAD 118 (252)
T ss_pred HHHHHh---------CCCcccchhhHHHHHHHHHHHHHcCCCEEEECCCCc
Confidence 211221 111211111 1145688899999999999998554
No 473
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=37.22 E-value=1.8e+02 Score=28.11 Aligned_cols=78 Identities=13% Similarity=0.094 Sum_probs=45.0
Q ss_pred HHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcC----CC-eEEEEEeCCCCCccccccHH
Q 013019 242 LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNN----NN-VSLFFTESPTNPFLRCVDVK 316 (451)
Q Consensus 242 l~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~----~~-tklV~lesPsNPtG~v~DL~ 316 (451)
+..|++.|.+|.+..-.-.. ....++++...|..|.+.|.++++. .. ...|++..|..+ .......
T Consensus 16 v~~L~~~g~~V~~~~R~~~~--------~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~-~~~~~~~ 86 (285)
T TIGR03649 16 ARLLQAASVPFLVASRSSSS--------SAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIP-DLAPPMI 86 (285)
T ss_pred HHHHHhCCCcEEEEeCCCcc--------ccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCC-ChhHHHH
Confidence 34566777766554322111 0123555555677888999888831 12 566776666422 2233456
Q ss_pred HHHHHHHhcCCE
Q 013019 317 LVSDLCHKKGAI 328 (451)
Q Consensus 317 ~IaelA~~~g~~ 328 (451)
.+.+.|++.|+.
T Consensus 87 ~~i~aa~~~gv~ 98 (285)
T TIGR03649 87 KFIDFARSKGVR 98 (285)
T ss_pred HHHHHHHHcCCC
Confidence 788888888863
No 474
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein. This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302.
Probab=37.13 E-value=3.2e+02 Score=29.56 Aligned_cols=115 Identities=19% Similarity=0.119 Sum_probs=67.2
Q ss_pred HHHHHHHHccCCCeEEEcCCCCcchHHHH---HHhhhcC-CcEEEEeCCCCHHHHHHhhcCCCeEEEEE-------eCCC
Q 013019 238 STVMLLALVPAGGHIVTTTDCYRKTRIFI---ETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFT-------ESPT 306 (451)
Q Consensus 238 i~~al~all~~GD~VIv~~~~Y~~t~~~l---~~~l~~~-Gi~v~~vd~~D~d~Le~ai~~~~tklV~l-------esPs 306 (451)
+...+..|+..|-.+|+-+..++-....+ +.+-..+ ++.+..-...+.+..+.+++-. ...|-+ |+-.
T Consensus 226 ~~~ra~~Lv~aGVd~i~~D~a~g~~~~~~~~i~~i~~~~~~~~vi~g~~~t~~~~~~l~~~G-~d~i~vg~g~Gs~~ttr 304 (475)
T TIGR01303 226 VGGKAKALLDAGVDVLVIDTAHGHQVKMISAIKAVRALDLGVPIVAGNVVSAEGVRDLLEAG-ANIIKVGVGPGAMCTTR 304 (475)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCcHHHHHHHHHHHHHCCCCeEEEeccCCHHHHHHHHHhC-CCEEEECCcCCccccCc
Confidence 34455677788877788888886543332 2222222 4554432355777777777643 555531 1222
Q ss_pred CCcccc----ccHHHHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEEE
Q 013019 307 NPFLRC----VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLH 353 (451)
Q Consensus 307 NPtG~v----~DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv~ 353 (451)
..+|.- ..+-++++.++++|+.+|.|.=+-.+ -..+.+.+|||.|+-
T Consensus 305 ~~~~~g~~~~~a~~~~~~~~~~~~~~viadGgi~~~~di~kala~GA~~vm~ 356 (475)
T TIGR01303 305 MMTGVGRPQFSAVLECAAEARKLGGHVWADGGVRHPRDVALALAAGASNVMV 356 (475)
T ss_pred cccCCCCchHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCCEEee
Confidence 223311 12445666678889999999876554 345677889997763
No 475
>PLN02672 methionine S-methyltransferase
Probab=36.98 E-value=1.2e+02 Score=36.09 Aligned_cols=124 Identities=12% Similarity=0.094 Sum_probs=69.1
Q ss_pred ccCCCchh-HHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHH------ccCCCeEEEcCCCCcchHHHHHH
Q 013019 204 YGRYGNPT-TVVVEEKMSALEG--------AESTVIMASGMSASTVMLLAL------VPAGGHIVTTTDCYRKTRIFIET 268 (451)
Q Consensus 204 Y~R~~npt-~~~Lee~LA~l~g--------ae~~vv~sSG~aAi~~al~al------l~~GD~VIv~~~~Y~~t~~~l~~ 268 (451)
|--|..|. ...++..+|.+.. .++.++++|-..||..+++.+ +..+..... + ..++..
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~ 491 (1082)
T PLN02672 419 YFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWL------P-KKWLTS 491 (1082)
T ss_pred CCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccC------C-HHHHhH
Confidence 44444454 4568888887653 367889999999997776533 333211111 1 112211
Q ss_pred h-------hhcCCcEEEEeCCC-CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC
Q 013019 269 V-------LPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 269 ~-------l~~~Gi~v~~vd~~-D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t 334 (451)
+ ....+..++.++.. .-+.+.+.|++-++++|++..-.-..-+..-++.|.+.+++.|++++.|..
T Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 492 LAIENATSDSKSDDVITVIEAPRQSDLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred hhhhcccccCccCCeEEEEeCCCcchHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehh
Confidence 1 12223455555421 223444455443567887633221111223467888899999999999997
No 476
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=36.93 E-value=1.6e+02 Score=26.69 Aligned_cols=74 Identities=14% Similarity=0.077 Sum_probs=48.4
Q ss_pred eEEEcCCC---CcchHHHHHHhhhcCCcEEEEeCCC-CH-HHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc
Q 013019 251 HIVTTTDC---YRKTRIFIETVLPKMGITATVIDPA-DM-EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (451)
Q Consensus 251 ~VIv~~~~---Y~~t~~~l~~~l~~~Gi~v~~vd~~-D~-d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~ 325 (451)
+|++.... |..-..++...++..|+++...... .+ |.+..++++. ..+|.+++-. -+.....+.+.+.+++.
T Consensus 14 rvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~tp~e~v~aA~~~d-v~vIgvSsl~--g~h~~l~~~lve~lre~ 90 (143)
T COG2185 14 RVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQTPEEAVRAAVEED-VDVIGVSSLD--GGHLTLVPGLVEALREA 90 (143)
T ss_pred eEEEeccCccccccchHHHHHHHHhCCceEEecCCcCCHHHHHHHHHhcC-CCEEEEEecc--chHHHHHHHHHHHHHHh
Confidence 45555543 3333455667788889998875432 23 4566666664 7888886555 34555688999999998
Q ss_pred CC
Q 013019 326 GA 327 (451)
Q Consensus 326 g~ 327 (451)
|.
T Consensus 91 G~ 92 (143)
T COG2185 91 GV 92 (143)
T ss_pred CC
Confidence 63
No 477
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=36.76 E-value=32 Score=36.96 Aligned_cols=31 Identities=16% Similarity=0.116 Sum_probs=27.4
Q ss_pred CCCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 305 PsNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
+..-.|+..|+++|++.||++|+.||+|-++
T Consensus 73 id~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 73 VRTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred cCcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3445799999999999999999999999985
No 478
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=36.09 E-value=3e+02 Score=24.88 Aligned_cols=39 Identities=21% Similarity=0.173 Sum_probs=26.0
Q ss_pred ccccccHHHHHHHHHhcCCEEEE--ecCCCCCCccccccCCCcEEEE
Q 013019 309 FLRCVDVKLVSDLCHKKGAIVCI--DGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 309 tG~v~DL~~IaelA~~~g~~lVV--D~tfa~~~~~~pl~~GaDiVv~ 353 (451)
.|...++-++++.|+++|+.+|. |.. ..|+...+|+++.
T Consensus 82 sG~t~~~i~~~~~ak~~g~~ii~IT~~~------~s~la~~ad~~l~ 122 (179)
T TIGR03127 82 SGETESLVTVAKKAKEIGATVAAITTNP------ESTLGKLADVVVE 122 (179)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEEECCC------CCchHHhCCEEEE
Confidence 47777888999999999977543 332 2334444776664
No 479
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=35.45 E-value=3.9e+02 Score=28.64 Aligned_cols=91 Identities=12% Similarity=0.172 Sum_probs=52.2
Q ss_pred HHccCCCeE-EEcCCCCc-chHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcC----CCeEEEEEeCCCCCccccccHHH
Q 013019 244 ALVPAGGHI-VTTTDCYR-KTRIFIETVLPKMGITATVIDPADMEGLEAALNN----NNVSLFFTESPTNPFLRCVDVKL 317 (451)
Q Consensus 244 all~~GD~V-Iv~~~~Y~-~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~----~~tklV~lesPsNPtG~v~DL~~ 317 (451)
.+...|-+| ++..+.|. +....+.......|+++... .+++++.+++.. .+..+|++.++....-....+++
T Consensus 264 ~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lgipv~v~--~d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~kd~~lm~E 341 (436)
T PRK11889 264 QFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAV--RDEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEE 341 (436)
T ss_pred HHHHcCCcEEEEecCCcchHHHHHHHHHhhhcCCcEEec--CCHHHHHHHHHHHHhccCCCEEEEeCccccCcCHHHHHH
Confidence 345556444 44555564 33444445556678776543 356666666631 12579999988743322333556
Q ss_pred HHHHHHh---cCCEEEEecCCC
Q 013019 318 VSDLCHK---KGAIVCIDGTFA 336 (451)
Q Consensus 318 IaelA~~---~g~~lVVD~tfa 336 (451)
+.++.+. +.++|++|.+..
T Consensus 342 L~~~lk~~~PdevlLVLsATtk 363 (436)
T PRK11889 342 MIETMGQVEPDYICLTLSASMK 363 (436)
T ss_pred HHHHHhhcCCCeEEEEECCccC
Confidence 6665543 567888998744
No 480
>PTZ00081 enolase; Provisional
Probab=35.43 E-value=2.2e+02 Score=30.54 Aligned_cols=86 Identities=10% Similarity=0.073 Sum_probs=59.9
Q ss_pred HccCCCeEEEcCCCCcchHHHHHHhhhcC--CcEEEEeC--CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHH
Q 013019 245 LVPAGGHIVTTTDCYRKTRIFIETVLPKM--GITATVID--PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (451)
Q Consensus 245 ll~~GD~VIv~~~~Y~~t~~~l~~~l~~~--Gi~v~~vd--~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~Iae 320 (451)
++..-+-+.+.+|.....+..+..+.+.. .+.+.--| ..+++.+++.++.+-...|.+. -|..|.+.+..++++
T Consensus 293 ~l~~y~I~~IEDPl~~~D~eg~~~Lt~~lg~~i~IvgDE~~~tn~~~l~~~I~~~aad~i~iK--vnqiGGITe~l~~a~ 370 (439)
T PTZ00081 293 LVKKYPIVSIEDPFDQDDWEAYAKLTAAIGQKVQIVGDDLLVTNPTRIKKAIEKKACNALLLK--VNQIGTVTEAIEAAK 370 (439)
T ss_pred HHhcCCcEEEEcCCCcccHHHHHHHHHhhCCCceEEcCCcccCCHHHHHHHHHhCCCCEEEec--cccccCHHHHHHHHH
Confidence 44544567888888877666666666666 34443223 2468888888876545566553 346788999999999
Q ss_pred HHHhcCCEEEEe
Q 013019 321 LCHKKGAIVCID 332 (451)
Q Consensus 321 lA~~~g~~lVVD 332 (451)
+|+++|+.+++=
T Consensus 371 lA~~~Gi~~iis 382 (439)
T PTZ00081 371 LAQKNGWGVMVS 382 (439)
T ss_pred HHHHcCCcEEEe
Confidence 999999888874
No 481
>PF00834 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase family; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Ralstonia eutropha (Alcaligenes eutrophus) two copies of the gene coding for PPE are known [], one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process; PDB: 3CTL_A 3CT7_D 3CU2_A 1RPX_A 3OVR_A 3OVP_A 3OVQ_B 3QC3_B 3INP_A 1TQJ_D ....
Probab=35.23 E-value=1.5e+02 Score=28.09 Aligned_cols=105 Identities=19% Similarity=0.252 Sum_probs=54.8
Q ss_pred HccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEE--eCCCCHHHHHHhhcCCCeEEEEEeCCCCC--ccccc------
Q 013019 245 LVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNP--FLRCV------ 313 (451)
Q Consensus 245 ll~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~--vd~~D~d~Le~ai~~~~tklV~lesPsNP--tG~v~------ 313 (451)
+...| |.|.+.-.........+ ...+..|+++-. -+...++.++..+.. ..+|.+-+. +| .|...
T Consensus 76 ~~~~g~~~i~~H~E~~~~~~~~i-~~ik~~g~k~GialnP~T~~~~~~~~l~~--vD~VlvMsV-~PG~~Gq~f~~~~~~ 151 (201)
T PF00834_consen 76 FAEAGADYITFHAEATEDPKETI-KYIKEAGIKAGIALNPETPVEELEPYLDQ--VDMVLVMSV-EPGFGGQKFIPEVLE 151 (201)
T ss_dssp HHHHT-SEEEEEGGGTTTHHHHH-HHHHHTTSEEEEEE-TTS-GGGGTTTGCC--SSEEEEESS--TTTSSB--HGGHHH
T ss_pred HHhcCCCEEEEcccchhCHHHHH-HHHHHhCCCEEEEEECCCCchHHHHHhhh--cCEEEEEEe-cCCCCcccccHHHHH
Confidence 34445 55555433333333344 334556666433 244456778777754 566666554 34 34332
Q ss_pred cHHHHHHHHHh--cCCEEEEecCCCCCCccccccCCCcEEEE
Q 013019 314 DVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 314 DL~~IaelA~~--~g~~lVVD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
-++++.++..+ ++..+.+|.-..........+.|+|++|.
T Consensus 152 KI~~l~~~~~~~~~~~~I~vDGGI~~~~~~~~~~aGad~~V~ 193 (201)
T PF00834_consen 152 KIRELRKLIPENGLDFEIEVDGGINEENIKQLVEAGADIFVA 193 (201)
T ss_dssp HHHHHHHHHHHHTCGSEEEEESSESTTTHHHHHHHT--EEEE
T ss_pred HHHHHHHHHHhcCCceEEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 24556666666 45899999865444334445679998774
No 482
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=35.12 E-value=4.2e+02 Score=25.58 Aligned_cols=122 Identities=16% Similarity=0.229 Sum_probs=69.4
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHH--HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE--EEEeCC-CC
Q 013019 210 PTTVVVEEKMSALEGAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDP-AD 284 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae~~vv~sSG~--aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~--v~~vd~-~D 284 (451)
|..-.|-..|+++-++...+=++++. +++..+. + ++...++++.+.. ..........+++.|+. ++.+-. +-
T Consensus 45 ~e~g~~L~~L~~~~~~k~iLEiGT~~GySal~mA~-~-l~~~g~l~tiE~~-~e~~~~A~~n~~~ag~~~~i~~~~~gda 121 (219)
T COG4122 45 PETGALLRLLARLSGPKRILEIGTAIGYSALWMAL-A-LPDDGRLTTIERD-EERAEIARENLAEAGVDDRIELLLGGDA 121 (219)
T ss_pred hhHHHHHHHHHHhcCCceEEEeecccCHHHHHHHh-h-CCCCCeEEEEeCC-HHHHHHHHHHHHHcCCcceEEEEecCcH
Confidence 77777888888888887776665544 5554432 2 3322366665422 12233344556666664 333332 33
Q ss_pred HHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC
Q 013019 285 MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 338 (451)
Q Consensus 285 ~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~ 338 (451)
++.+++...+ .-.+||+..== --....++.+.++.+ .|.++|+||+.-.+
T Consensus 122 l~~l~~~~~~-~fDliFIDadK--~~yp~~le~~~~lLr-~GGliv~DNvl~~G 171 (219)
T COG4122 122 LDVLSRLLDG-SFDLVFIDADK--ADYPEYLERALPLLR-PGGLIVADNVLFGG 171 (219)
T ss_pred HHHHHhccCC-CccEEEEeCCh--hhCHHHHHHHHHHhC-CCcEEEEeecccCC
Confidence 5566653333 37899995321 112234566666644 68899999996554
No 483
>PLN03187 meiotic recombination protein DMC1 homolog; Provisional
Probab=34.91 E-value=2.8e+02 Score=28.68 Aligned_cols=43 Identities=9% Similarity=0.192 Sum_probs=28.0
Q ss_pred hhcCCCeEEEEEeCCCCCccc-------ccc--------HHHHHHHHHhcCCEEEEec
Q 013019 291 ALNNNNVSLFFTESPTNPFLR-------CVD--------VKLVSDLCHKKGAIVCIDG 333 (451)
Q Consensus 291 ai~~~~tklV~lesPsNPtG~-------v~D--------L~~IaelA~~~g~~lVVD~ 333 (451)
.+.+.++++|++.+.+...-. ..+ +..|..+++++|+.+++=|
T Consensus 216 ~i~~~~~~LvVIDSital~r~~~~~rg~l~~rq~~L~~~~~~L~~lA~~~~vavvvTN 273 (344)
T PLN03187 216 KMAEEPFRLLIVDSVIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTN 273 (344)
T ss_pred HHHhcCCCEEEEeCcHHhhhccccCccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 343445899999998755321 111 2457778899998877755
No 484
>TIGR02238 recomb_DMC1 meiotic recombinase Dmc1. This model describes DMC1, a subfamily of a larger family of DNA repair and recombination proteins. It is eukaryotic only and most closely related to eukaryotic RAD51. It also resembles archaeal RadA (TIGR02236) and RadB (TIGR02237) and bacterial RecA (TIGR02012). It has been characterized for human as a recombinase active only in meiosis.
Probab=34.85 E-value=3.2e+02 Score=27.74 Aligned_cols=43 Identities=9% Similarity=0.175 Sum_probs=27.8
Q ss_pred hhcCCCeEEEEEeCCCCCccc-------ccc--------HHHHHHHHHhcCCEEEEec
Q 013019 291 ALNNNNVSLFFTESPTNPFLR-------CVD--------VKLVSDLCHKKGAIVCIDG 333 (451)
Q Consensus 291 ai~~~~tklV~lesPsNPtG~-------v~D--------L~~IaelA~~~g~~lVVD~ 333 (451)
.+.+.++++|++.+.++..-. ..+ +..|..+|+++|+.+++=|
T Consensus 186 ~i~~~~~~LvVIDSisal~r~~~~~~g~~~~r~~~l~~~~~~L~~la~~~~vavvitN 243 (313)
T TIGR02238 186 KFSEEPFRLLIVDSIMALFRVDFSGRGELSERQQKLAQMLSRLNKISEEFNVAVFVTN 243 (313)
T ss_pred HhhccCCCEEEEEcchHhhhhhccCccchHHHHHHHHHHHHHHHHHHHHcCcEEEEEC
Confidence 344445899999998755321 111 2347778999998877744
No 485
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=34.81 E-value=3.7e+02 Score=26.07 Aligned_cols=120 Identities=13% Similarity=0.216 Sum_probs=60.6
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCC-CeEEEcCCC-CcchHHHHHHhhhcCCcEEEE--eCCCCHHHHHHhhcCCCeEEEE
Q 013019 226 ESTVIMASGMSASTVMLLALVPAG-GHIVTTTDC-YRKTRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFF 301 (451)
Q Consensus 226 e~~vv~sSG~aAi~~al~all~~G-D~VIv~~~~-Y~~t~~~l~~~l~~~Gi~v~~--vd~~D~d~Le~ai~~~~tklV~ 301 (451)
+--+++..--. .+..+.+.| |.|.+.-.. .....+.+ ...+..|++.-. -+.+.++.++..+.. +.+|.
T Consensus 63 DvHLMv~~P~~----~i~~~~~aGad~it~H~Ea~~~~~~~~i-~~Ik~~G~kaGlalnP~T~~~~l~~~l~~--vD~VL 135 (229)
T PRK09722 63 DVHLMVTDPQD----YIDQLADAGADFITLHPETINGQAFRLI-DEIRRAGMKVGLVLNPETPVESIKYYIHL--LDKIT 135 (229)
T ss_pred EEEEEecCHHH----HHHHHHHcCCCEEEECccCCcchHHHHH-HHHHHcCCCEEEEeCCCCCHHHHHHHHHh--cCEEE
Confidence 33455554322 233444555 555554331 11122333 334555665433 244578888888864 44444
Q ss_pred E--eCCCCCccccc------cHHHHHHHHHhcC--CEEEEecCCCCCCccccccCCCcEEEE
Q 013019 302 T--ESPTNPFLRCV------DVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 302 l--esPsNPtG~v~------DL~~IaelA~~~g--~~lVVD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
+ -+|.. .|... -++++.++..++| +.+-+|.-....-.....+.|+|++|.
T Consensus 136 vMsV~PGf-~GQ~fi~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~~i~~~~~aGad~~V~ 196 (229)
T PRK09722 136 VMTVDPGF-AGQPFIPEMLDKIAELKALRERNGLEYLIEVDGSCNQKTYEKLMEAGADVFIV 196 (229)
T ss_pred EEEEcCCC-cchhccHHHHHHHHHHHHHHHhcCCCeEEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 4 33432 23322 2455555555655 779999754322222334679998874
No 486
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=34.66 E-value=87 Score=26.37 Aligned_cols=39 Identities=26% Similarity=0.179 Sum_probs=26.1
Q ss_pred ccccccHHHHHHHHHhcCCEEE--EecCCCCCCccccccCCCcEEEE
Q 013019 309 FLRCVDVKLVSDLCHKKGAIVC--IDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 309 tG~v~DL~~IaelA~~~g~~lV--VD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
.|...++-++++.++++|+.+| .|+. ..++...+|.++.
T Consensus 56 sG~t~e~~~~~~~a~~~g~~vi~iT~~~------~s~la~~ad~~l~ 96 (126)
T cd05008 56 SGETADTLAALRLAKEKGAKTVAITNVV------GSTLAREADYVLY 96 (126)
T ss_pred CcCCHHHHHHHHHHHHcCCeEEEEECCC------CChHHHhCCEEEE
Confidence 5777788899999999997764 4432 2334444676664
No 487
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=34.39 E-value=2.9e+02 Score=29.06 Aligned_cols=97 Identities=20% Similarity=0.186 Sum_probs=51.0
Q ss_pred EEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCC
Q 013019 228 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 307 (451)
Q Consensus 228 ~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsN 307 (451)
.++++.|-+.+.+ ...+.+.|-.|...+.........+...+...|+.+..-...+++.++..+.+ ..+|+. +|.-
T Consensus 3 v~viG~G~sG~s~-a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~--~d~vv~-s~gi 78 (459)
T PRK02705 3 AHVIGLGRSGIAA-ARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQ--PDLVVV-SPGI 78 (459)
T ss_pred EEEEccCHHHHHH-HHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhc--CCEEEE-CCCC
Confidence 4566666666654 45566788888887744332222221234556887754333344444444543 456665 5654
Q ss_pred CccccccHHHHHHHHHhcCCEEEEec
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDG 333 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~ 333 (451)
| .|-. +...|++.|+.++-+-
T Consensus 79 ~----~~~~-~~~~a~~~~i~v~~~~ 99 (459)
T PRK02705 79 P----WDHP-TLVELRERGIEVIGEI 99 (459)
T ss_pred C----CCCH-HHHHHHHcCCcEEEhH
Confidence 3 2222 3334456666665544
No 488
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=34.15 E-value=5.2e+02 Score=26.31 Aligned_cols=100 Identities=13% Similarity=0.069 Sum_probs=55.5
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCCC--eEEEcC--CCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEE
Q 013019 226 ESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 301 (451)
Q Consensus 226 e~~vv~sSG~aAi~~al~all~~GD--~VIv~~--~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~ 301 (451)
.+.+++-+-+.++..++....+.|. +|++.+ |.+.+ ..+.+.++..|++++.+.- .++-..+++ +..|+
T Consensus 120 g~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG--~~~ak~L~~~gI~~~~I~D---sa~~~~~~~--vd~Vi 192 (301)
T COG1184 120 GDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEG--RIMAKELRQSGIPVTVIVD---SAVGAFMSR--VDKVL 192 (301)
T ss_pred CCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchH--HHHHHHHHHcCCceEEEec---hHHHHHHHh--CCEEE
Confidence 4456655555666666666667776 555543 55554 3344667888998876531 233333432 44455
Q ss_pred EeCCC-CCcccccc---HHHHHHHHHhcCCEEEEe
Q 013019 302 TESPT-NPFLRCVD---VKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 302 lesPs-NPtG~v~D---L~~IaelA~~~g~~lVVD 332 (451)
+-.=. --.|.+.. ---|+..||+++.++++=
T Consensus 193 vGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~ 227 (301)
T COG1184 193 VGADAILANGALVNKIGTSPLALAARELRVPFYVV 227 (301)
T ss_pred ECccceecCCcEEeccchHHHHHHHHHhCCCEEEE
Confidence 42111 01133332 246888899999886553
No 489
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=34.07 E-value=1.1e+02 Score=31.61 Aligned_cols=103 Identities=17% Similarity=0.154 Sum_probs=57.7
Q ss_pred EEEeCCHH--HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHh----hhcCCcEEEEeCCCCHHHHHHhhcCCC-eEEE
Q 013019 228 TVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV----LPKMGITATVIDPADMEGLEAALNNNN-VSLF 300 (451)
Q Consensus 228 ~vv~sSG~--aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~----l~~~Gi~v~~vd~~D~d~Le~ai~~~~-tklV 300 (451)
.++++.|. -.-.+ ...|++.|+.|++.|+.-......+... .+..++.+...|..|.+.|++..+..+ ..++
T Consensus 4 ~VLVtGgaGyiGsht-~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~ 82 (343)
T KOG1371|consen 4 HVLVTGGAGYIGSHT-VLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM 82 (343)
T ss_pred EEEEecCCcceehHH-HHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence 45555555 23333 3467899999888887655544333322 222457777788889999998886543 2344
Q ss_pred EE-------eCCCCCcccccc----HHHHHHHHHhcCCEEEE
Q 013019 301 FT-------ESPTNPFLRCVD----VKLVSDLCHKKGAIVCI 331 (451)
Q Consensus 301 ~l-------esPsNPtG~v~D----L~~IaelA~~~g~~lVV 331 (451)
++ |+.-||+-..-. -=.+.+.++++|..-+|
T Consensus 83 Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V 124 (343)
T KOG1371|consen 83 HFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALV 124 (343)
T ss_pred eehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEE
Confidence 43 222233211111 12466777787755333
No 490
>PRK00077 eno enolase; Provisional
Probab=33.73 E-value=2.7e+02 Score=29.48 Aligned_cols=87 Identities=10% Similarity=0.077 Sum_probs=60.7
Q ss_pred HHHccCCCeEEEcCCCCcchHHHHHHhhhcCC--cEEEEeCC--CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHH
Q 013019 243 LALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (451)
Q Consensus 243 ~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~G--i~v~~vd~--~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~I 318 (451)
..++.+-+-+.+.+|.....+..+..+.+..| +.+..-+. .+++.+++.++..-...|.+. .|..|.+.+..++
T Consensus 271 ~~l~e~y~i~~iEdPl~~~D~~g~~~L~~~~~~~ipI~gdE~~~t~~~~~~~~i~~~a~d~v~ik--~~~~GGitea~~i 348 (425)
T PRK00077 271 AELVDKYPIVSIEDGLDENDWEGWKLLTEKLGDKVQLVGDDLFVTNTKRLKKGIEKGAANSILIK--VNQIGTLTETLDA 348 (425)
T ss_pred HHHHhhCCcEEEEcCCCCccHHHHHHHHHhcCCCCeEEcCCCccCCHHHHHHHHHhCCCCEEEeC--ccccCCHHHHHHH
Confidence 44555556778889988776666666655654 55533332 368899988876545666653 3457889999999
Q ss_pred HHHHHhcCCEEEE
Q 013019 319 SDLCHKKGAIVCI 331 (451)
Q Consensus 319 aelA~~~g~~lVV 331 (451)
+++|+++|+.+++
T Consensus 349 a~lA~~~gi~~~v 361 (425)
T PRK00077 349 IELAKRAGYTAVV 361 (425)
T ss_pred HHHHHHcCCeEEE
Confidence 9999999997665
No 491
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=33.72 E-value=36 Score=37.29 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=29.3
Q ss_pred CCCCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 304 SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 304 sPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
.|....|...+++++++.||++|+.||+|-++.
T Consensus 151 ~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~N 183 (542)
T TIGR02402 151 APHNAYGGPDDLKALVDAAHGLGLGVILDVVYN 183 (542)
T ss_pred ccccccCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 566678999999999999999999999998864
No 492
>TIGR01060 eno phosphopyruvate hydratase. Alternate name: enolase
Probab=33.45 E-value=2.1e+02 Score=30.28 Aligned_cols=85 Identities=13% Similarity=0.066 Sum_probs=59.3
Q ss_pred HccCCCeEEEcCCCCcchHHHHHHhhhcC--CcEEEEeCC--CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHH
Q 013019 245 LVPAGGHIVTTTDCYRKTRIFIETVLPKM--GITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (451)
Q Consensus 245 ll~~GD~VIv~~~~Y~~t~~~l~~~l~~~--Gi~v~~vd~--~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~Iae 320 (451)
++..=+-+.+.+|.....+..+..+.+.. .+.+..-+. .+++.+++.++..-...|.+. + |..|.+.+..++++
T Consensus 274 lle~~~i~~iEdPl~~~D~~~~~~L~~~~~~~ipI~gDE~~~t~~~~~~~~i~~~a~d~v~ik-~-~~iGGItea~~ia~ 351 (425)
T TIGR01060 274 LVEKYPIVSIEDGLSEEDWEGWAELTKELGDKVQIVGDDLFVTNTEILREGIEMGVANSILIK-P-NQIGTLTETLDAVE 351 (425)
T ss_pred HHhcCCcEEEEcCCCcccHHHHHHHHHhcCCCCeEEeCCCcccCHHHHHHHHHhCCCCEEEec-c-cccCCHHHHHHHHH
Confidence 34444566788898777666666665666 455543332 368899988876545566653 3 56899999999999
Q ss_pred HHHhcCCEEEE
Q 013019 321 LCHKKGAIVCI 331 (451)
Q Consensus 321 lA~~~g~~lVV 331 (451)
+|+++|+.+++
T Consensus 352 lA~~~Gi~~vv 362 (425)
T TIGR01060 352 LAKKAGYTAVI 362 (425)
T ss_pred HHHHcCCcEEE
Confidence 99999997554
No 493
>PRK11823 DNA repair protein RadA; Provisional
Probab=33.34 E-value=3.2e+02 Score=29.21 Aligned_cols=53 Identities=13% Similarity=0.270 Sum_probs=35.6
Q ss_pred EeCCCCHHHHHHhhcCCCeEEEEEeCCCCCc--------ccccc----HHHHHHHHHhcCCEEEE
Q 013019 279 VIDPADMEGLEAALNNNNVSLFFTESPTNPF--------LRCVD----VKLVSDLCHKKGAIVCI 331 (451)
Q Consensus 279 ~vd~~D~d~Le~ai~~~~tklV~lesPsNPt--------G~v~D----L~~IaelA~~~g~~lVV 331 (451)
+....+++.+.+.+++.++++|++.+.+... |.... +..|.++++++|+.+++
T Consensus 139 ~~~e~~l~~i~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~~ak~~~itvil 203 (446)
T PRK11823 139 LLAETNLEAILATIEEEKPDLVVIDSIQTMYSPELESAPGSVSQVRECAAELMRLAKQRGIAVFL 203 (446)
T ss_pred EeCCCCHHHHHHHHHhhCCCEEEEechhhhccccccCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 3444578888888876568999999887432 12222 23578889999986554
No 494
>PF01070 FMN_dh: FMN-dependent dehydrogenase; InterPro: IPR000262 A number of oxidoreductases that act on alpha-hydroxy acids and which are FMN-containing flavoproteins have been shown [, , ] to be structurally related. These enzymes are: Lactate dehydrogenase (1.1.2.3 from EC), which consists of a dehydrogenase domain and a haem-binding domain called cytochrome b2 and which catalyses the conversion of lactate into pyruvate. Glycolate oxidase (1.1.3.15 from EC) ((S)-2-hydroxy-acid oxidase), a peroxisomal enzyme that catalyses the conversion of glycolate and oxygen to glyoxylate and hydrogen peroxide. Long chain alpha-hydroxy acid oxidase from rat (1.1.3.15 from EC), a peroxisomal enzyme. Lactate 2-monooxygenase (1.13.12.4 from EC) (lactate oxidase) from Mycobacterium smegmatis, which catalyses the conversion of lactate and oxygen to acetate, carbon dioxide and water. (S)-mandelate dehydrogenase from Pseudomonas putida (gene mdlB), which catalyses the reduction of (S)-mandelate to benzoylformate. The first step in the reaction mechanism of these enzymes is the abstraction of the proton from the alpha-carbon of the substrate producing a carbanion which can subsequently attach to the N5 atom of FMN. A conserved histidine has been shown [] to be involved in the removal of the proton. The region around this active site residue is highly conserved and contains an arginine residue which is involved in substrate binding.; GO: 0016491 oxidoreductase activity; PDB: 1VCG_C 1VCF_A 1P0N_B 1P0K_A 2A85_A 2A7P_A 3GIY_A 2A7N_A 3DH7_A 2RDU_A ....
Probab=33.00 E-value=1.2e+02 Score=31.49 Aligned_cols=87 Identities=22% Similarity=0.117 Sum_probs=54.8
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc-----cccHHHHHHHHHhc--CCEEEEecCC
Q 013019 263 RIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR-----CVDVKLVSDLCHKK--GAIVCIDGTF 335 (451)
Q Consensus 263 ~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~-----v~DL~~IaelA~~~--g~~lVVD~tf 335 (451)
+.-++.+.+..++++..=...+.++.+.+.+-. ++.|++ +|--|+ +..++.|.++.+.. ++.|++|.-.
T Consensus 214 w~~i~~~~~~~~~pvivKgv~~~~da~~~~~~G-~~~i~v---s~hGGr~~d~~~~~~~~L~~i~~~~~~~~~i~~dgGi 289 (356)
T PF01070_consen 214 WDDIEWIRKQWKLPVIVKGVLSPEDAKRAVDAG-VDGIDV---SNHGGRQLDWGPPTIDALPEIRAAVGDDIPIIADGGI 289 (356)
T ss_dssp HHHHHHHHHHCSSEEEEEEE-SHHHHHHHHHTT--SEEEE---ESGTGTSSTTS-BHHHHHHHHHHHHTTSSEEEEESS-
T ss_pred HHHHHHHhcccCCceEEEecccHHHHHHHHhcC-CCEEEe---cCCCcccCccccccccccHHHHhhhcCCeeEEEeCCC
Confidence 344555566667776543446788888888764 889998 444455 34467777776644 5999999876
Q ss_pred CCCC-ccccccCCCcEEEE
Q 013019 336 ATPL-NQKALSLGADLVLH 353 (451)
Q Consensus 336 a~~~-~~~pl~~GaDiVv~ 353 (451)
-.+. ..+.+.+|+|.|..
T Consensus 290 r~g~Dv~kalaLGA~~v~i 308 (356)
T PF01070_consen 290 RRGLDVAKALALGADAVGI 308 (356)
T ss_dssp -SHHHHHHHHHTT-SEEEE
T ss_pred CCHHHHHHHHHcCCCeEEE
Confidence 5553 34667889988764
No 495
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=32.94 E-value=5.1e+02 Score=25.90 Aligned_cols=109 Identities=20% Similarity=0.190 Sum_probs=54.7
Q ss_pred HHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCC--eEEEcC--CCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhh
Q 013019 217 EKMSALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAAL 292 (451)
Q Consensus 217 e~LA~l~gae~~vv~sSG~aAi~~al~all~~GD--~VIv~~--~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai 292 (451)
+.-+++....+.+++-+.+.....+|....+.|. +|++.+ |.+.+. .+ ...+...|++++++.-.-...+ +
T Consensus 101 ~~a~~~I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~-~l-a~eL~~~GI~vtlI~Dsa~~~~---m 175 (275)
T PRK08335 101 NIGSELIDDGDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGL-AL-ANELEFLGIEFEVITDAQLGLF---A 175 (275)
T ss_pred HHHHHHcCCCCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHH-HH-HHHHHHCCCCEEEEeccHHHHH---H
Confidence 3334444434455544333334444444455554 566654 444442 33 3456677999887643222222 3
Q ss_pred cCCCeEEEEEeCC-CCCcccccc---HHHHHHHHHhcCCEEEEe
Q 013019 293 NNNNVSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 293 ~~~~tklV~lesP-sNPtG~v~D---L~~IaelA~~~g~~lVVD 332 (451)
.+ +..|++..= --..|.+.. --.|+-+|+.||+++++=
T Consensus 176 ~~--vd~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV~ 217 (275)
T PRK08335 176 KE--ATLALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYVA 217 (275)
T ss_pred Hh--CCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEEE
Confidence 22 444444110 011243332 235777789999998763
No 496
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=32.80 E-value=2e+02 Score=25.52 Aligned_cols=69 Identities=12% Similarity=0.217 Sum_probs=44.8
Q ss_pred HHHHHhhhcCCcEEEEeCCC-CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc---CCEEEEecC
Q 013019 264 IFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDGT 334 (451)
Q Consensus 264 ~~l~~~l~~~Gi~v~~vd~~-D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~---g~~lVVD~t 334 (451)
.++...++..|.++.+.-.. .++++.+++.+.++.+|.+..-.. .....++++.+..++. ++.+++=..
T Consensus 21 ~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~--~~~~~~~~~~~~L~~~~~~~~~i~vGG~ 93 (137)
T PRK02261 21 KILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYG--HGEIDCRGLREKCIEAGLGDILLYVGGN 93 (137)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccc--cCHHHHHHHHHHHHhcCCCCCeEEEECC
Confidence 34555678889999876543 467777777665688998854442 3444677777777776 444555443
No 497
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=32.80 E-value=3e+02 Score=30.69 Aligned_cols=121 Identities=18% Similarity=0.291 Sum_probs=64.6
Q ss_pred cccCCCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHH---hhhcCCcEEE
Q 013019 203 EYGRYGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIET---VLPKMGITAT 278 (451)
Q Consensus 203 ~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~---~l~~~Gi~v~ 278 (451)
.|........+.++..++ |.+..+++++|. =.+-.-+-+++.+|=.+|+++ ...+++. .+...|+...
T Consensus 14 Gy~~FR~gQ~evI~~~l~---g~d~lvvmPTGgGKSlCyQiPAll~~G~TLVVSP-----LiSLM~DQV~~l~~~Gi~A~ 85 (590)
T COG0514 14 GYASFRPGQQEIIDALLS---GKDTLVVMPTGGGKSLCYQIPALLLEGLTLVVSP-----LISLMKDQVDQLEAAGIRAA 85 (590)
T ss_pred CccccCCCHHHHHHHHHc---CCcEEEEccCCCCcchHhhhHHHhcCCCEEEECc-----hHHHHHHHHHHHHHcCceee
Confidence 344443333333444333 233344455555 344444677888897777753 3444432 3567788887
Q ss_pred EeCCC-C---HHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 279 VIDPA-D---MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 279 ~vd~~-D---~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
.++.. + ...+...+.....+++|+ +|- ........+..+ +-.=..+++||++.
T Consensus 86 ~lnS~l~~~e~~~v~~~l~~g~~klLyi-sPE--rl~~~~f~~~L~--~~~i~l~vIDEAHC 142 (590)
T COG0514 86 YLNSTLSREERQQVLNQLKSGQLKLLYI-SPE--RLMSPRFLELLK--RLPISLVAIDEAHC 142 (590)
T ss_pred hhhcccCHHHHHHHHHHHhcCceeEEEE-Cch--hhcChHHHHHHH--hCCCceEEechHHH
Confidence 76643 3 334555555445899998 443 111112222222 33457899999954
No 498
>PLN02535 glycolate oxidase
Probab=32.79 E-value=1.6e+02 Score=30.75 Aligned_cols=88 Identities=20% Similarity=0.177 Sum_probs=56.6
Q ss_pred hHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc-----HHHHHHHHHhc--CCEEEEecC
Q 013019 262 TRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD-----VKLVSDLCHKK--GAIVCIDGT 334 (451)
Q Consensus 262 t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D-----L~~IaelA~~~--g~~lVVD~t 334 (451)
++..++.+....+.++..=...+.++.+.+++-. ...|++.+ .-|+..| +..|.++.+.. ++.||.|.=
T Consensus 211 tW~~i~~lr~~~~~PvivKgV~~~~dA~~a~~~G-vD~I~vsn---~GGr~~d~~~~t~~~L~ev~~av~~~ipVi~dGG 286 (364)
T PLN02535 211 SWKDIEWLRSITNLPILIKGVLTREDAIKAVEVG-VAGIIVSN---HGARQLDYSPATISVLEEVVQAVGGRVPVLLDGG 286 (364)
T ss_pred CHHHHHHHHhccCCCEEEecCCCHHHHHHHHhcC-CCEEEEeC---CCcCCCCCChHHHHHHHHHHHHHhcCCCEEeeCC
Confidence 3444444444455555544456778877777654 78888743 3354444 67777776653 689999987
Q ss_pred CCCCCc-cccccCCCcEEEE
Q 013019 335 FATPLN-QKALSLGADLVLH 353 (451)
Q Consensus 335 fa~~~~-~~pl~~GaDiVv~ 353 (451)
...+.. .+.+.+|+|.|..
T Consensus 287 Ir~g~Dv~KALalGA~aV~v 306 (364)
T PLN02535 287 VRRGTDVFKALALGAQAVLV 306 (364)
T ss_pred CCCHHHHHHHHHcCCCEEEE
Confidence 666532 4678899997764
No 499
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=32.70 E-value=4.3e+02 Score=26.28 Aligned_cols=74 Identities=9% Similarity=0.158 Sum_probs=42.8
Q ss_pred chHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhc---C-CCeEEEEEeCCCCCccccccHHHHHHHHHh---cCCEEEEec
Q 013019 261 KTRIFIETVLPKMGITATVIDPADMEGLEAALN---N-NNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIVCIDG 333 (451)
Q Consensus 261 ~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~---~-~~tklV~lesPsNPtG~v~DL~~IaelA~~---~g~~lVVD~ 333 (451)
+....+.......++++.. ..+.+++.++++ + .+..+|++.+|....-....++++.++.+. ..+.+|+|.
T Consensus 117 ~~~~ql~~~~~~~~~~~~~--~~~~~~l~~~l~~l~~~~~~D~ViIDt~Gr~~~~~~~l~el~~~~~~~~~~~~~LVl~a 194 (270)
T PRK06731 117 GTVQQLQDYVKTIGFEVIA--VRDEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEEMIETMGQVEPDYICLTLSA 194 (270)
T ss_pred HHHHHHHHHhhhcCceEEe--cCCHHHHHHHHHHHHhcCCCCEEEEECCCCCcCCHHHHHHHHHHHhhhCCCeEEEEEcC
Confidence 3444444555666766543 235566655542 1 236899999987443333346666665543 346889998
Q ss_pred CCC
Q 013019 334 TFA 336 (451)
Q Consensus 334 tfa 336 (451)
+..
T Consensus 195 ~~~ 197 (270)
T PRK06731 195 SMK 197 (270)
T ss_pred ccC
Confidence 743
No 500
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=32.61 E-value=1.6e+02 Score=27.60 Aligned_cols=88 Identities=15% Similarity=0.132 Sum_probs=56.3
Q ss_pred HHHHHhhhcCCcEEEEeCCC-CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcC----CEEEEecCCCCC
Q 013019 264 IFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG----AIVCIDGTFATP 338 (451)
Q Consensus 264 ~~l~~~l~~~Gi~v~~vd~~-D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g----~~lVVD~tfa~~ 338 (451)
.++..+++..|.++.+.-.. .++++.+++.+.++.+|.+..-. +-....++++.+..++.+ +.+++=...-++
T Consensus 102 ~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~--~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~~~~ 179 (197)
T TIGR02370 102 NIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALM--TTTMYGQKDINDKLKEEGYRDSVKFMVGGAPVTQ 179 (197)
T ss_pred HHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcccc--ccCHHHHHHHHHHHHHcCCCCCCEEEEEChhcCH
Confidence 34556678889999876543 46788887876668888884433 223446788888888763 667776653322
Q ss_pred CccccccCCCcEEEECC
Q 013019 339 LNQKALSLGADLVLHSA 355 (451)
Q Consensus 339 ~~~~pl~~GaDiVv~S~ 355 (451)
.. ....|+|.+..+.
T Consensus 180 ~~--~~~~gad~~~~da 194 (197)
T TIGR02370 180 DW--ADKIGADVYGENA 194 (197)
T ss_pred HH--HHHhCCcEEeCCh
Confidence 11 1245888776544
Done!