Query 013019
Match_columns 451
No_of_seqs 424 out of 2737
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 20:42:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013019.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013019hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qgn_A Protein (cystathionine 100.0 1.5E-49 5.3E-54 416.3 35.3 301 145-446 49-350 (445)
2 3ri6_A O-acetylhomoserine sulf 100.0 5.7E-50 1.9E-54 417.7 27.6 294 150-446 24-338 (430)
3 2fq6_A Cystathionine beta-lyas 100.0 6.4E-49 2.2E-53 407.8 30.6 292 152-446 25-319 (415)
4 3ndn_A O-succinylhomoserine su 100.0 4.5E-48 1.6E-52 401.0 31.6 291 152-446 26-317 (414)
5 3nmy_A Xometc, cystathionine g 100.0 2.3E-47 7.8E-52 394.1 28.8 285 151-447 18-305 (400)
6 3qhx_A Cystathionine gamma-syn 100.0 3.7E-45 1.3E-49 375.4 33.9 286 151-446 16-302 (392)
7 3acz_A Methionine gamma-lyase; 100.0 4.4E-45 1.5E-49 373.8 33.2 291 152-447 5-296 (389)
8 3cog_A Cystathionine gamma-lya 100.0 1.4E-44 4.8E-49 372.8 30.4 283 152-446 18-303 (403)
9 1gc0_A Methionine gamma-lyase; 100.0 5.2E-42 1.8E-46 351.5 29.8 293 152-447 9-303 (398)
10 2ctz_A O-acetyl-L-homoserine s 100.0 1.2E-41 4.2E-46 352.3 29.9 291 152-445 2-326 (421)
11 1e5e_A MGL, methionine gamma-l 100.0 4.3E-41 1.5E-45 346.4 32.1 292 151-446 6-300 (404)
12 1n8p_A Cystathionine gamma-lya 100.0 3.3E-41 1.1E-45 346.3 27.7 280 152-444 7-292 (393)
13 2cb1_A O-acetyl homoserine sul 100.0 1.4E-39 4.9E-44 335.1 32.0 287 152-444 2-317 (412)
14 2rfv_A Methionine gamma-lyase; 100.0 1.1E-38 3.6E-43 326.3 33.5 292 152-446 8-301 (398)
15 1cs1_A CGS, protein (cystathio 100.0 2.9E-38 9.8E-43 321.4 32.0 284 151-445 3-287 (386)
16 1ibj_A CBL, cystathionine beta 100.0 1.5E-36 5E-41 319.3 32.1 282 152-446 86-368 (464)
17 3i16_A Aluminum resistance pro 100.0 1.2E-34 4E-39 302.0 25.4 240 200-446 66-333 (427)
18 3hvy_A Cystathionine beta-lyas 100.0 7.5E-34 2.6E-38 296.0 25.2 239 200-446 67-333 (427)
19 3jzl_A Putative cystathionine 100.0 2.2E-33 7.6E-38 290.8 25.8 239 200-446 52-316 (409)
20 1pff_A Methionine gamma-lyase; 100.0 4.1E-31 1.4E-35 261.9 22.9 231 214-445 2-235 (331)
21 3ht4_A Aluminum resistance pro 100.0 6.3E-28 2.1E-32 251.4 22.5 235 207-446 62-322 (431)
22 3op7_A Aminotransferase class 99.9 1.3E-24 4.5E-29 218.5 23.5 220 208-433 61-301 (375)
23 1bs0_A Protein (8-amino-7-oxon 99.9 2.2E-23 7.6E-28 210.2 29.8 212 209-428 83-310 (384)
24 1jg8_A L-ALLO-threonine aldola 99.9 9E-24 3.1E-28 209.9 23.2 216 208-427 36-272 (347)
25 1t3i_A Probable cysteine desul 99.9 6.3E-24 2.2E-28 215.5 21.8 227 202-432 64-329 (420)
26 3tqx_A 2-amino-3-ketobutyrate 99.9 4.1E-23 1.4E-27 208.4 26.9 213 208-427 86-318 (399)
27 1fc4_A 2-amino-3-ketobutyrate 99.9 2.6E-23 8.9E-28 210.9 25.5 212 209-427 89-319 (401)
28 3ffh_A Histidinol-phosphate am 99.9 4.6E-23 1.6E-27 206.3 26.4 221 204-432 61-300 (363)
29 3dzz_A Putative pyridoxal 5'-p 99.9 6.7E-23 2.3E-27 206.3 27.4 227 201-432 57-315 (391)
30 2aeu_A Hypothetical protein MJ 99.9 4.9E-24 1.7E-28 216.8 19.2 205 212-426 60-279 (374)
31 3ju7_A Putative PLP-dependent 99.9 1.2E-23 4E-28 214.7 21.9 210 209-430 35-274 (377)
32 3euc_A Histidinol-phosphate am 99.9 1.7E-23 5.7E-28 209.8 21.6 220 204-431 61-300 (367)
33 3get_A Histidinol-phosphate am 99.9 2.6E-23 9E-28 208.2 22.9 219 204-431 59-300 (365)
34 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 6.8E-24 2.3E-28 212.1 17.5 221 203-432 46-292 (371)
35 3nra_A Aspartate aminotransfer 99.9 3.5E-23 1.2E-27 209.7 22.4 219 208-432 80-331 (407)
36 3lvm_A Cysteine desulfurase; s 99.9 4.3E-23 1.5E-27 210.4 23.0 221 208-433 66-309 (423)
37 3ly1_A Putative histidinol-pho 99.9 4.7E-23 1.6E-27 205.2 22.7 217 204-427 45-283 (354)
38 2z61_A Probable aspartate amin 99.9 9.1E-23 3.1E-27 204.9 24.9 209 211-427 67-296 (370)
39 1fg7_A Histidinol phosphate am 99.9 1.3E-22 4.4E-27 204.0 25.8 218 205-432 53-291 (356)
40 4dq6_A Putative pyridoxal phos 99.9 1.7E-22 5.9E-27 203.3 26.8 225 201-432 62-319 (391)
41 3nyt_A Aminotransferase WBPE; 99.9 7.8E-23 2.7E-27 206.0 23.0 211 208-428 33-267 (367)
42 1kmj_A Selenocysteine lyase; p 99.9 5.2E-23 1.8E-27 207.5 21.6 221 208-432 65-325 (406)
43 3cai_A Possible aminotransfera 99.9 4.3E-23 1.5E-27 209.3 20.9 225 202-431 61-326 (406)
44 3e2y_A Kynurenine-oxoglutarate 99.9 1.3E-22 4.3E-27 206.1 24.2 220 205-431 55-323 (410)
45 3a2b_A Serine palmitoyltransfe 99.9 4.1E-22 1.4E-26 202.1 28.0 212 208-427 86-314 (398)
46 2dr1_A PH1308 protein, 386AA l 99.9 2.8E-22 9.7E-27 201.0 26.4 217 209-430 52-302 (386)
47 1b9h_A AHBA synthase, protein 99.9 7.8E-23 2.7E-27 206.7 22.2 217 204-432 32-278 (388)
48 2w8t_A SPT, serine palmitoyltr 99.9 1.7E-22 6E-27 208.1 24.6 213 209-430 108-337 (427)
49 1b5p_A Protein (aspartate amin 99.9 6.6E-22 2.2E-26 200.5 28.0 210 212-427 70-310 (385)
50 3kax_A Aminotransferase, class 99.9 6E-22 2E-26 198.8 27.1 226 201-432 54-311 (383)
51 3kki_A CAI-1 autoinducer synth 99.9 2E-22 6.9E-27 205.6 23.9 210 210-427 104-327 (409)
52 1j32_A Aspartate aminotransfer 99.9 7.9E-22 2.7E-26 199.1 27.9 214 212-431 69-314 (388)
53 1c7n_A Cystalysin; transferase 99.9 6.2E-22 2.1E-26 200.6 26.2 215 212-431 68-318 (399)
54 3uwc_A Nucleotide-sugar aminot 99.9 2.3E-22 7.9E-27 201.7 22.8 214 208-431 36-273 (374)
55 3frk_A QDTB; aminotransferase, 99.9 1.9E-22 6.6E-27 203.0 22.2 212 207-428 33-268 (373)
56 3lws_A Aromatic amino acid bet 99.9 2.1E-22 7.1E-27 201.1 22.0 217 209-432 46-280 (357)
57 3fvs_A Kynurenine--oxoglutarat 99.9 2.4E-22 8.1E-27 205.2 22.3 213 212-431 69-330 (422)
58 1v2d_A Glutamine aminotransfer 99.9 4.9E-22 1.7E-26 200.4 24.3 218 206-430 56-299 (381)
59 1o4s_A Aspartate aminotransfer 99.9 6.4E-22 2.2E-26 200.8 25.1 211 211-427 79-316 (389)
60 2dou_A Probable N-succinyldiam 99.9 4.1E-22 1.4E-26 200.6 23.4 216 206-427 58-303 (376)
61 4hvk_A Probable cysteine desul 99.9 1.3E-22 4.6E-27 202.2 19.4 223 202-432 35-280 (382)
62 3l8a_A METC, putative aminotra 99.9 6.7E-22 2.3E-26 202.9 25.0 229 200-433 90-349 (421)
63 3hdo_A Histidinol-phosphate am 99.9 2.3E-22 7.9E-27 201.5 20.8 220 204-431 59-287 (360)
64 1lc5_A COBD, L-threonine-O-3-p 99.9 6.7E-22 2.3E-26 198.4 24.0 218 205-432 54-292 (364)
65 3pj0_A LMO0305 protein; struct 99.9 4.3E-22 1.5E-26 198.6 22.5 220 208-433 46-283 (359)
66 2oga_A Transaminase; PLP-depen 99.9 6.4E-22 2.2E-26 201.7 24.2 214 208-431 61-298 (399)
67 3zrp_A Serine-pyruvate aminotr 99.9 3.4E-22 1.2E-26 200.0 21.6 214 209-427 34-285 (384)
68 3dyd_A Tyrosine aminotransfera 99.9 1E-21 3.4E-26 202.5 25.6 218 209-433 95-349 (427)
69 3fdb_A Beta C-S lyase, putativ 99.9 2.1E-22 7E-27 202.0 19.9 214 213-432 61-303 (377)
70 1u08_A Hypothetical aminotrans 99.9 1.9E-21 6.4E-26 196.5 26.7 213 212-431 69-312 (386)
71 1elu_A L-cysteine/L-cystine C- 99.9 5.8E-22 2E-26 199.1 22.8 220 210-432 59-321 (390)
72 1gd9_A Aspartate aminotransfer 99.9 1.9E-21 6.4E-26 196.4 26.6 210 212-427 65-308 (389)
73 2o1b_A Aminotransferase, class 99.9 5.6E-22 1.9E-26 202.7 22.5 211 211-427 86-326 (404)
74 3h14_A Aminotransferase, class 99.9 1E-21 3.5E-26 198.7 23.5 209 212-429 70-304 (391)
75 3g0t_A Putative aminotransfera 99.9 4.5E-22 1.6E-26 204.0 21.0 220 206-431 77-357 (437)
76 2x5d_A Probable aminotransfera 99.9 2.8E-21 9.7E-26 197.3 26.0 212 210-427 75-318 (412)
77 3ftb_A Histidinol-phosphate am 99.9 2.1E-21 7.1E-26 193.6 24.1 217 204-433 55-292 (361)
78 3jtx_A Aminotransferase; NP_28 99.9 5.4E-21 1.8E-25 193.2 26.6 210 212-427 72-317 (396)
79 1xi9_A Putative transaminase; 99.9 4.6E-21 1.6E-25 195.4 26.2 214 212-432 80-328 (406)
80 3vax_A Putative uncharacterize 99.9 4.6E-22 1.6E-26 201.0 18.3 224 202-432 55-307 (400)
81 1vjo_A Alanine--glyoxylate ami 99.9 1.5E-21 5.3E-26 197.0 22.1 217 209-430 66-316 (393)
82 3isl_A Purine catabolism prote 99.9 1.1E-21 3.8E-26 199.0 21.0 170 209-382 43-221 (416)
83 4eb5_A Probable cysteine desul 99.9 6.1E-22 2.1E-26 198.3 18.7 218 209-432 42-280 (382)
84 3ruy_A Ornithine aminotransfer 99.9 2.9E-21 9.8E-26 195.5 23.7 222 202-427 70-322 (392)
85 1eg5_A Aminotransferase; PLP-d 99.9 1.3E-21 4.5E-26 195.8 20.8 217 209-431 43-282 (384)
86 2o0r_A RV0858C (N-succinyldiam 99.9 7.5E-21 2.6E-25 194.1 26.7 210 212-427 64-306 (411)
87 3p1t_A Putative histidinol-pho 99.9 2.8E-21 9.7E-26 190.8 22.7 211 204-427 45-268 (337)
88 2z9v_A Aspartate aminotransfer 99.9 4.8E-21 1.7E-25 193.0 24.6 216 210-430 42-291 (392)
89 2po3_A 4-dehydrase; external a 99.9 2.1E-20 7.1E-25 192.0 29.5 212 209-432 51-285 (424)
90 1yiz_A Kynurenine aminotransfe 99.9 1E-20 3.5E-25 193.9 27.2 210 212-427 79-335 (429)
91 1mdo_A ARNB aminotransferase; 99.9 4.1E-21 1.4E-25 193.9 23.8 210 208-428 37-281 (393)
92 3ezs_A Aminotransferase ASPB; 99.9 1.1E-21 3.7E-26 197.0 19.1 208 212-425 61-301 (376)
93 1d2f_A MALY protein; aminotran 99.9 2E-20 6.8E-25 189.1 28.1 213 212-430 65-313 (390)
94 2c81_A Glutamine-2-deoxy-scyll 99.9 1.5E-20 5.2E-25 192.5 27.3 210 212-432 44-291 (418)
95 3cq5_A Histidinol-phosphate am 99.9 4.1E-21 1.4E-25 193.3 22.6 219 206-432 65-305 (369)
96 2r2n_A Kynurenine/alpha-aminoa 99.9 2.5E-20 8.5E-25 191.7 28.7 217 211-433 83-347 (425)
97 2bwn_A 5-aminolevulinate synth 99.9 1.9E-20 6.7E-25 189.9 27.3 211 209-427 90-321 (401)
98 2fnu_A Aminotransferase; prote 99.9 7.2E-21 2.5E-25 190.3 23.7 213 208-431 30-271 (375)
99 3nnk_A Ureidoglycine-glyoxylat 99.9 3.3E-21 1.1E-25 195.2 21.3 170 210-383 46-224 (411)
100 3b46_A Aminotransferase BNA3; 99.9 7.8E-21 2.7E-25 197.1 24.5 210 212-427 97-350 (447)
101 3dr4_A Putative perosamine syn 99.9 7.9E-21 2.7E-25 192.4 23.6 211 208-430 54-290 (391)
102 3f9t_A TDC, L-tyrosine decarbo 99.9 1.2E-21 4.2E-26 196.2 17.5 215 210-431 69-331 (397)
103 2gb3_A Aspartate aminotransfer 99.9 6.4E-21 2.2E-25 194.7 23.1 209 212-427 81-317 (409)
104 2huf_A Alanine glyoxylate amin 99.9 6E-21 2.1E-25 192.4 22.4 220 204-427 46-302 (393)
105 2x5f_A Aspartate_tyrosine_phen 99.9 8.1E-21 2.8E-25 195.0 23.6 216 206-426 83-353 (430)
106 1bw0_A TAT, protein (tyrosine 99.9 1.1E-20 3.9E-25 192.5 24.5 215 211-432 76-337 (416)
107 3aow_A Putative uncharacterize 99.9 1.3E-20 4.6E-25 196.0 25.4 216 211-432 119-370 (448)
108 2zyj_A Alpha-aminodipate amino 99.9 3.1E-21 1.1E-25 195.8 20.0 216 211-432 75-318 (397)
109 1iay_A ACC synthase 2, 1-amino 99.9 1.4E-20 4.6E-25 193.2 24.3 218 204-427 76-343 (428)
110 1vp4_A Aminotransferase, putat 99.9 9.8E-21 3.4E-25 194.5 22.1 211 211-427 86-334 (425)
111 3fkd_A L-threonine-O-3-phospha 99.9 4.1E-21 1.4E-25 191.4 18.7 216 204-432 44-272 (350)
112 1iug_A Putative aspartate amin 99.9 1.1E-20 3.9E-25 187.0 21.5 213 210-431 34-274 (352)
113 3kgw_A Alanine-glyoxylate amin 99.9 8.6E-21 2.9E-25 190.4 20.4 215 209-427 55-306 (393)
114 2zc0_A Alanine glyoxylate tran 99.9 1.2E-20 4.1E-25 191.6 21.3 214 211-430 76-326 (407)
115 4adb_A Succinylornithine trans 99.9 1.2E-20 4E-25 191.4 21.1 219 203-427 74-322 (406)
116 2ch1_A 3-hydroxykynurenine tra 99.9 7.4E-21 2.5E-25 191.9 19.5 220 204-427 45-301 (396)
117 3ele_A Amino transferase; RER0 99.9 1.9E-20 6.4E-25 189.6 22.0 208 213-427 79-323 (398)
118 3ffr_A Phosphoserine aminotran 99.9 1.9E-20 6.6E-25 185.8 21.5 213 210-432 43-290 (362)
119 1v72_A Aldolase; PLP-dependent 99.9 8.3E-20 2.8E-24 181.1 25.6 219 208-433 41-289 (356)
120 2eh6_A Acoat, acetylornithine 99.9 1.5E-20 5.1E-25 188.6 20.3 219 206-429 66-311 (375)
121 3ihj_A Alanine aminotransferas 99.9 9.7E-20 3.3E-24 192.5 27.2 218 210-432 133-407 (498)
122 3tcm_A Alanine aminotransferas 99.9 1.2E-19 4E-24 191.8 27.7 215 212-432 136-408 (500)
123 3b8x_A WBDK, pyridoxamine 5-ph 99.9 7.5E-20 2.6E-24 185.4 24.4 213 208-431 32-293 (390)
124 3piu_A 1-aminocyclopropane-1-c 99.9 3.7E-20 1.3E-24 190.5 22.5 215 206-427 81-348 (435)
125 1m32_A 2-aminoethylphosphonate 99.9 2.1E-20 7E-25 185.5 19.6 213 210-427 37-285 (366)
126 7aat_A Aspartate aminotransfer 99.9 1.7E-19 6E-24 182.9 26.8 211 212-427 73-336 (401)
127 3mad_A Sphingosine-1-phosphate 99.9 4.6E-20 1.6E-24 194.8 23.3 213 214-433 143-402 (514)
128 3f0h_A Aminotransferase; RER07 99.9 4.2E-20 1.4E-24 185.1 21.8 214 210-428 52-298 (376)
129 3t18_A Aminotransferase class 99.9 6.1E-20 2.1E-24 187.2 23.2 211 212-427 85-346 (413)
130 2yrr_A Aminotransferase, class 99.8 2.5E-20 8.4E-25 184.0 19.4 215 210-431 33-277 (353)
131 3ppl_A Aspartate aminotransfer 99.8 4.2E-20 1.4E-24 189.7 21.7 211 210-426 78-334 (427)
132 1o69_A Aminotransferase; struc 99.8 1.5E-19 5.3E-24 184.0 24.7 209 209-427 31-266 (394)
133 2bkw_A Alanine-glyoxylate amin 99.8 1.5E-19 5E-24 181.2 24.1 214 212-431 40-304 (385)
134 1qz9_A Kynureninase; kynurenin 99.8 6.2E-20 2.1E-24 186.6 20.6 216 210-431 71-331 (416)
135 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 1.7E-19 5.9E-24 186.3 24.1 216 207-431 59-331 (437)
136 3rq1_A Aminotransferase class 99.8 2.1E-19 7.1E-24 183.6 24.4 211 212-427 82-348 (418)
137 3nx3_A Acoat, acetylornithine 99.8 1.3E-19 4.5E-24 183.6 22.5 228 201-433 69-329 (395)
138 3if2_A Aminotransferase; YP_26 99.8 7.9E-20 2.7E-24 188.1 21.0 215 212-429 85-354 (444)
139 1uu1_A Histidinol-phosphate am 99.8 2E-19 6.9E-24 178.5 21.3 204 206-427 52-272 (335)
140 3ez1_A Aminotransferase MOCR f 99.8 1.9E-19 6.5E-24 184.1 21.5 190 210-405 70-299 (423)
141 3meb_A Aspartate aminotransfer 99.8 6.9E-19 2.3E-23 182.8 25.8 217 210-427 94-371 (448)
142 3qgu_A LL-diaminopimelate amin 99.8 1.1E-19 3.8E-24 187.5 19.5 212 210-427 111-364 (449)
143 3n0l_A Serine hydroxymethyltra 99.8 3E-19 1E-23 181.3 22.3 216 209-431 66-304 (417)
144 1vef_A Acetylornithine/acetyl- 99.8 1.3E-19 4.6E-24 183.4 19.4 217 207-428 84-325 (395)
145 3d6k_A Putative aminotransfera 99.8 1.5E-19 5.1E-24 185.7 20.0 215 206-426 71-332 (422)
146 3mc6_A Sphingosine-1-phosphate 99.8 1.6E-19 5.4E-24 189.3 20.0 214 213-433 110-371 (497)
147 3g7q_A Valine-pyruvate aminotr 99.8 2.8E-19 9.7E-24 181.8 21.3 215 210-429 75-328 (417)
148 1svv_A Threonine aldolase; str 99.8 2.2E-19 7.5E-24 177.9 19.8 222 202-430 41-289 (359)
149 3a9z_A Selenocysteine lyase; P 99.8 1.3E-19 4.5E-24 185.6 18.4 214 210-428 61-326 (432)
150 3hbx_A GAD 1, glutamate decarb 99.8 5.7E-19 1.9E-23 186.8 23.8 215 214-435 99-369 (502)
151 1wyu_B Glycine dehydrogenase s 99.8 2.7E-19 9.3E-24 187.5 21.1 213 211-430 108-365 (474)
152 1ajs_A Aspartate aminotransfer 99.8 1.1E-18 3.8E-23 177.6 24.9 215 209-428 73-345 (412)
153 2ez2_A Beta-tyrosinase, tyrosi 99.8 7.1E-19 2.4E-23 181.8 23.3 210 208-427 73-332 (456)
154 3ei9_A LL-diaminopimelate amin 99.8 4.2E-19 1.4E-23 182.3 20.5 212 210-427 98-352 (432)
155 4eu1_A Mitochondrial aspartate 99.8 9.7E-19 3.3E-23 178.3 22.9 215 209-428 78-345 (409)
156 2dgk_A GAD-beta, GADB, glutama 99.8 3.5E-19 1.2E-23 184.9 19.9 214 212-433 83-352 (452)
157 4f4e_A Aromatic-amino-acid ami 99.8 2.5E-18 8.4E-23 176.3 25.8 211 212-427 94-355 (420)
158 3fsl_A Aromatic-amino-acid ami 99.8 2.1E-18 7.1E-23 174.3 24.7 213 211-428 71-334 (397)
159 2q7w_A Aspartate aminotransfer 99.8 1.8E-18 6.2E-23 174.7 24.1 215 209-428 68-333 (396)
160 1yaa_A Aspartate aminotransfer 99.8 1.3E-18 4.5E-23 177.3 23.1 214 210-428 73-345 (412)
161 2dkj_A Serine hydroxymethyltra 99.8 5.1E-19 1.8E-23 179.1 19.8 216 208-431 63-303 (407)
162 3e9k_A Kynureninase; kynurenin 99.8 6E-19 2E-23 183.4 20.7 216 210-427 111-375 (465)
163 2a7v_A Serine hydroxymethyltra 99.8 3E-19 1E-23 188.9 17.8 217 208-431 94-357 (490)
164 3bwn_A AT1G70560, L-tryptophan 99.8 4.4E-19 1.5E-23 181.1 18.3 206 213-431 71-305 (391)
165 2ord_A Acoat, acetylornithine 99.8 2.2E-19 7.5E-24 182.2 15.9 210 207-426 79-320 (397)
166 2z67_A O-phosphoseryl-tRNA(SEC 99.8 6.9E-19 2.3E-23 183.5 19.8 210 211-428 134-370 (456)
167 3ke3_A Putative serine-pyruvat 99.8 2.6E-18 8.9E-23 174.2 22.5 213 210-427 35-294 (379)
168 3vp6_A Glutamate decarboxylase 99.8 1.9E-18 6.5E-23 183.2 22.4 221 208-434 129-415 (511)
169 3h7f_A Serine hydroxymethyltra 99.8 9.5E-19 3.3E-23 181.7 19.6 214 208-427 85-321 (447)
170 2pb2_A Acetylornithine/succiny 99.8 1.8E-18 6.2E-23 178.0 20.9 217 206-427 95-340 (420)
171 3gbx_A Serine hydroxymethyltra 99.8 9E-19 3.1E-23 177.8 18.2 213 212-431 78-311 (420)
172 1rv3_A Serine hydroxymethyltra 99.8 2.3E-18 7.8E-23 181.2 21.7 217 209-432 85-348 (483)
173 3f6t_A Aspartate aminotransfer 99.8 1.3E-18 4.5E-23 185.4 19.8 157 213-375 141-330 (533)
174 2oat_A Ornithine aminotransfer 99.8 7.7E-18 2.6E-22 174.8 25.0 217 207-427 115-363 (439)
175 1c4k_A Protein (ornithine deca 99.8 2.7E-18 9.2E-23 189.5 22.5 219 208-432 171-444 (730)
176 2ay1_A Aroat, aromatic amino a 99.8 3.7E-18 1.2E-22 172.5 21.6 213 210-427 69-329 (394)
177 3b1d_A Betac-S lyase; HET: PLP 99.7 4.3E-21 1.5E-25 194.7 0.0 215 212-431 68-318 (392)
178 1ax4_A Tryptophanase; tryptoph 99.8 3.7E-18 1.3E-22 176.8 21.9 215 208-430 74-344 (467)
179 1z7d_A Ornithine aminotransfer 99.8 1.3E-17 4.3E-22 172.7 25.1 217 207-426 104-351 (433)
180 3asa_A LL-diaminopimelate amin 99.8 4E-18 1.4E-22 173.5 20.5 215 210-431 75-318 (400)
181 3ecd_A Serine hydroxymethyltra 99.8 1.1E-17 3.6E-22 170.1 23.2 207 215-427 83-309 (425)
182 2okj_A Glutamate decarboxylase 99.8 6.8E-18 2.3E-22 177.9 22.2 220 210-433 128-411 (504)
183 2jis_A Cysteine sulfinic acid 99.8 1.2E-17 4.2E-22 176.7 23.7 215 213-433 151-426 (515)
184 2vyc_A Biodegradative arginine 99.8 7.3E-18 2.5E-22 186.9 22.9 215 207-429 202-466 (755)
185 1js3_A DDC;, DOPA decarboxylas 99.8 7.4E-18 2.5E-22 176.5 20.5 218 209-433 108-401 (486)
186 2vi8_A Serine hydroxymethyltra 99.8 6.6E-18 2.2E-22 170.8 19.1 217 208-431 63-302 (405)
187 3dxv_A Alpha-amino-epsilon-cap 99.8 1.6E-17 5.5E-22 171.0 21.2 227 201-432 77-348 (439)
188 2hox_A ALLIIN lyase 1; cystein 99.8 3.1E-18 1.1E-22 177.4 15.9 206 212-431 102-340 (427)
189 2x3l_A ORN/Lys/Arg decarboxyla 99.8 3.6E-18 1.2E-22 177.9 15.1 165 202-378 49-230 (446)
190 1sff_A 4-aminobutyrate aminotr 99.7 4.3E-17 1.5E-21 166.3 20.1 216 205-426 79-337 (426)
191 3n75_A LDC, lysine decarboxyla 99.7 3.3E-17 1.1E-21 180.1 19.3 213 208-429 193-444 (715)
192 1s0a_A Adenosylmethionine-8-am 99.7 1.3E-16 4.4E-21 163.8 22.6 225 204-431 80-357 (429)
193 3a8u_X Omega-amino acid--pyruv 99.7 2.8E-16 9.6E-21 162.4 24.8 218 206-426 89-367 (449)
194 4a6r_A Omega transaminase; tra 99.7 3.5E-16 1.2E-20 162.7 25.1 230 202-434 86-374 (459)
195 2c0r_A PSAT, phosphoserine ami 99.7 1E-17 3.6E-22 167.5 12.7 204 211-430 50-285 (362)
196 2oqx_A Tryptophanase; lyase, p 99.7 1.1E-16 3.8E-21 165.6 20.2 216 208-431 72-347 (467)
197 3k7y_A Aspartate aminotransfer 99.7 5.8E-16 2E-20 159.8 25.3 216 202-425 66-333 (405)
198 2zy4_A L-aspartate beta-decarb 99.7 3.3E-17 1.1E-21 175.3 16.3 150 227-380 166-338 (546)
199 1w23_A Phosphoserine aminotran 99.7 6.9E-18 2.3E-22 168.0 10.2 204 211-430 49-284 (360)
200 1wyu_A Glycine dehydrogenase ( 99.7 1.3E-16 4.4E-21 164.9 20.0 214 210-432 108-368 (438)
201 3gju_A Putative aminotransfera 99.7 6.3E-16 2.2E-20 160.9 25.0 229 203-434 88-379 (460)
202 3tfu_A Adenosylmethionine-8-am 99.7 1.5E-16 5.1E-21 166.2 19.7 229 204-435 112-390 (457)
203 2eo5_A 419AA long hypothetical 99.7 3.2E-16 1.1E-20 160.9 21.8 218 205-427 81-348 (419)
204 3i4j_A Aminotransferase, class 99.7 5.3E-16 1.8E-20 159.2 23.2 225 206-433 68-346 (430)
205 2qma_A Diaminobutyrate-pyruvat 99.7 1.7E-16 5.8E-21 166.9 19.6 226 202-433 130-419 (497)
206 4e1o_A HDC, histidine decarbox 99.7 2.4E-16 8.3E-21 165.5 20.7 226 201-433 107-405 (481)
207 3dod_A Adenosylmethionine-8-am 99.7 2E-16 6.9E-21 163.9 19.4 226 205-433 82-367 (448)
208 2cy8_A D-phgat, D-phenylglycin 99.7 2.6E-16 8.9E-21 163.0 19.9 215 207-426 94-343 (453)
209 3l44_A Glutamate-1-semialdehyd 99.7 2.1E-16 7.4E-21 162.4 18.9 217 206-426 91-342 (434)
210 2epj_A Glutamate-1-semialdehyd 99.7 1E-16 3.6E-21 164.9 16.2 217 206-426 92-343 (434)
211 3n5m_A Adenosylmethionine-8-am 99.7 8.9E-16 3E-20 158.9 22.6 226 205-434 86-372 (452)
212 1zod_A DGD, 2,2-dialkylglycine 99.7 1.7E-15 5.8E-20 155.4 23.9 224 205-432 80-353 (433)
213 2fyf_A PSAT, phosphoserine ami 99.7 1.8E-16 6.2E-21 161.1 15.9 211 211-432 79-322 (398)
214 3k40_A Aromatic-L-amino-acid d 99.7 8.1E-16 2.8E-20 161.5 20.1 220 208-433 107-398 (475)
215 3k28_A Glutamate-1-semialdehyd 99.7 3.6E-16 1.2E-20 160.8 16.7 216 207-426 90-339 (429)
216 4e77_A Glutamate-1-semialdehyd 99.7 6.9E-16 2.4E-20 158.5 18.8 216 207-426 90-340 (429)
217 3oks_A 4-aminobutyrate transam 99.7 2.8E-15 9.5E-20 155.9 22.5 229 202-434 96-377 (451)
218 3hmu_A Aminotransferase, class 99.7 5.3E-15 1.8E-19 155.1 24.0 229 202-434 91-376 (472)
219 3fq8_A Glutamate-1-semialdehyd 99.7 8E-16 2.8E-20 157.7 17.0 216 207-426 89-339 (427)
220 2e7u_A Glutamate-1-semialdehyd 99.7 2E-15 6.9E-20 154.8 20.0 215 207-426 89-339 (424)
221 3i5t_A Aminotransferase; pyrid 99.7 6.4E-15 2.2E-19 154.6 22.7 226 206-434 93-379 (476)
222 4ffc_A 4-aminobutyrate aminotr 99.6 4.6E-15 1.6E-19 154.4 20.1 228 202-434 99-375 (453)
223 2cjg_A L-lysine-epsilon aminot 99.6 6.8E-15 2.3E-19 152.9 18.6 221 205-433 96-382 (449)
224 4h51_A Aspartate aminotransfer 99.6 7.4E-14 2.5E-18 144.9 24.2 219 202-427 81-351 (420)
225 3hl2_A O-phosphoseryl-tRNA(SEC 99.6 1.3E-14 4.6E-19 150.8 17.9 203 216-427 123-355 (501)
226 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 4E-14 1.4E-18 147.8 19.2 210 213-428 101-338 (450)
227 3ou5_A Serine hydroxymethyltra 99.6 7.8E-14 2.7E-18 144.6 18.0 215 208-428 94-355 (490)
228 2yky_A Beta-transaminase; tran 99.3 3.6E-16 1.2E-20 164.3 0.0 215 206-426 136-374 (465)
229 3e77_A Phosphoserine aminotran 99.4 1.4E-12 4.7E-17 133.5 14.5 208 211-431 59-296 (377)
230 1ohv_A 4-aminobutyrate aminotr 99.4 4.3E-12 1.5E-16 132.9 15.5 205 211-426 111-393 (472)
231 3qm2_A Phosphoserine aminotran 99.3 6.6E-12 2.2E-16 128.8 11.1 155 209-377 71-239 (386)
232 3m5u_A Phosphoserine aminotran 99.3 1.8E-11 6.1E-16 124.5 14.2 203 210-430 50-283 (361)
233 4ao9_A Beta-phenylalanine amin 99.3 3.3E-11 1.1E-15 126.1 16.1 224 208-435 125-373 (454)
234 4atq_A 4-aminobutyrate transam 99.1 6.4E-09 2.2E-13 108.8 22.7 227 208-438 105-385 (456)
235 4e3q_A Pyruvate transaminase; 99.1 2.4E-08 8E-13 105.0 24.9 228 208-438 109-397 (473)
236 4a0g_A Adenosylmethionine-8-am 98.9 1.1E-08 3.6E-13 114.6 13.8 227 207-436 421-758 (831)
237 3dr5_A Putative O-methyltransf 68.1 57 0.0019 29.5 11.9 119 209-335 38-165 (221)
238 3ic5_A Putative saccharopine d 67.5 40 0.0014 26.2 9.6 90 227-330 7-97 (118)
239 3ruf_A WBGU; rossmann fold, UD 59.1 79 0.0027 29.9 11.7 99 226-327 26-143 (351)
240 2xhz_A KDSD, YRBH, arabinose 5 59.0 61 0.0021 27.9 10.0 40 309-354 106-147 (183)
241 2avd_A Catechol-O-methyltransf 58.5 88 0.003 27.6 11.2 122 209-335 54-181 (229)
242 1zco_A 2-dehydro-3-deoxyphosph 57.7 56 0.0019 30.9 10.0 88 273-360 129-237 (262)
243 3c85_A Putative glutathione-re 56.9 33 0.0011 29.7 7.7 88 226-326 40-130 (183)
244 1lss_A TRK system potassium up 56.4 75 0.0026 25.4 10.0 89 227-326 6-94 (140)
245 3llv_A Exopolyphosphatase-rela 55.6 78 0.0027 25.8 9.7 89 226-326 7-95 (141)
246 3i6i_A Putative leucoanthocyan 55.4 53 0.0018 31.3 9.7 105 227-336 12-121 (346)
247 2yxb_A Coenzyme B12-dependent 55.2 27 0.00091 30.4 6.8 82 250-333 19-107 (161)
248 3tr6_A O-methyltransferase; ce 54.3 1.1E+02 0.0036 27.0 11.0 120 209-336 49-177 (225)
249 3tfw_A Putative O-methyltransf 51.8 1.1E+02 0.0039 27.7 11.0 123 209-336 48-173 (248)
250 3duw_A OMT, O-methyltransferas 51.5 1.2E+02 0.0043 26.5 11.3 120 209-336 43-170 (223)
251 2r6j_A Eugenol synthase 1; phe 50.1 59 0.002 30.5 8.9 103 227-336 13-117 (318)
252 3cbg_A O-methyltransferase; cy 50.0 1.4E+02 0.0049 26.7 12.5 120 208-335 56-184 (232)
253 1sui_A Caffeoyl-COA O-methyltr 50.0 1.5E+02 0.0052 27.0 12.7 123 209-336 64-193 (247)
254 1qyd_A Pinoresinol-lariciresin 48.9 92 0.0032 28.8 10.1 105 228-336 7-118 (313)
255 1xrs_B D-lysine 5,6-aminomutas 48.8 1.1E+02 0.0039 28.9 10.5 122 232-356 103-243 (262)
256 3tnl_A Shikimate dehydrogenase 47.4 64 0.0022 31.4 8.7 103 226-337 155-266 (315)
257 4gqr_A Pancreatic alpha-amylas 47.2 12 0.00039 37.8 3.5 82 247-335 7-99 (496)
258 3c3y_A Pfomt, O-methyltransfer 47.1 1.6E+02 0.0055 26.5 12.1 119 209-335 55-183 (237)
259 3sho_A Transcriptional regulat 47.0 1.3E+02 0.0044 25.8 10.1 110 213-356 27-140 (187)
260 3r3h_A O-methyltransferase, SA 46.9 87 0.003 28.6 9.3 123 209-336 45-173 (242)
261 1tks_A 3,4-dihydroxy-2-butanon 45.6 24 0.00083 32.4 5.0 35 297-331 160-194 (204)
262 2g1u_A Hypothetical protein TM 43.3 1.4E+02 0.0049 24.8 10.1 96 225-333 19-118 (155)
263 3gi1_A LBP, laminin-binding pr 42.9 49 0.0017 31.5 7.1 70 248-331 178-256 (286)
264 2zcu_A Uncharacterized oxidore 42.5 97 0.0033 28.2 8.9 79 242-327 16-96 (286)
265 1y80_A Predicted cobalamin bin 42.3 77 0.0026 28.3 8.0 101 250-354 89-197 (210)
266 1vim_A Hypothetical protein AF 41.1 1.2E+02 0.004 26.7 9.0 42 309-354 99-140 (200)
267 3tsm_A IGPS, indole-3-glycerol 40.5 77 0.0026 30.2 7.9 98 251-353 97-195 (272)
268 3dm5_A SRP54, signal recogniti 39.2 1.6E+02 0.0055 30.0 10.6 124 212-336 76-225 (443)
269 2o1e_A YCDH; alpha-beta protei 39.0 71 0.0024 30.8 7.6 69 248-330 189-266 (312)
270 3qtp_A Enolase 1; glycolysis, 38.7 1.2E+02 0.004 31.1 9.4 95 236-333 283-380 (441)
271 3tla_A MCCF; serine protease, 38.7 92 0.0031 31.0 8.5 73 246-318 40-134 (371)
272 2jl1_A Triphenylmethane reduct 38.7 1.8E+02 0.006 26.4 10.1 80 241-327 16-99 (287)
273 1qyc_A Phenylcoumaran benzylic 38.3 1E+02 0.0036 28.3 8.5 102 228-336 7-115 (308)
274 2yvq_A Carbamoyl-phosphate syn 38.2 71 0.0024 27.1 6.6 87 236-331 37-130 (143)
275 1pq4_A Periplasmic binding pro 38.2 95 0.0032 29.5 8.3 70 248-331 189-265 (291)
276 3c1o_A Eugenol synthase; pheny 37.9 1.2E+02 0.004 28.3 8.9 89 242-336 21-115 (321)
277 3vnd_A TSA, tryptophan synthas 37.5 1E+02 0.0036 29.1 8.3 87 245-333 119-213 (267)
278 1vhx_A Putative holliday junct 37.3 49 0.0017 28.5 5.5 55 284-338 43-103 (150)
279 1g94_A Alpha-amylase; beta-alp 37.0 19 0.00063 36.6 3.1 31 305-335 57-87 (448)
280 4h1h_A LMO1638 protein; MCCF-l 36.9 96 0.0033 30.1 8.2 69 245-313 8-95 (327)
281 2gas_A Isoflavone reductase; N 36.6 1.4E+02 0.0048 27.4 9.1 60 272-336 54-114 (307)
282 3khj_A Inosine-5-monophosphate 36.5 3.2E+02 0.011 26.8 13.5 110 243-353 111-235 (361)
283 3u81_A Catechol O-methyltransf 36.3 1.6E+02 0.0056 25.8 9.2 124 208-336 42-173 (221)
284 3io5_A Recombination and repai 36.1 2.1E+02 0.0072 28.1 10.4 80 249-332 58-168 (333)
285 4e5s_A MCCFLIKE protein (BA_56 35.8 94 0.0032 30.3 7.9 61 246-306 9-88 (331)
286 1m3s_A Hypothetical protein YC 35.5 2.1E+02 0.0071 24.4 9.6 101 214-354 26-130 (186)
287 4af0_A Inosine-5'-monophosphat 35.3 1.1E+02 0.0038 32.2 8.6 118 242-362 286-419 (556)
288 3sr3_A Microcin immunity prote 35.3 1.1E+02 0.0037 29.9 8.3 73 246-318 10-104 (336)
289 2xw6_A MGS, methylglyoxal synt 35.0 35 0.0012 29.2 4.0 59 273-332 48-111 (134)
290 3enk_A UDP-glucose 4-epimerase 34.8 1.3E+02 0.0044 28.2 8.7 76 228-303 7-85 (341)
291 1b93_A Protein (methylglyoxal 34.7 87 0.003 27.3 6.6 76 249-332 39-119 (152)
292 3bh4_A Alpha-amylase; calcium, 34.2 25 0.00086 35.9 3.6 31 305-335 71-101 (483)
293 1qop_A Tryptophan synthase alp 33.5 1.3E+02 0.0045 28.1 8.3 108 243-352 116-232 (268)
294 4df3_A Fibrillarin-like rRNA/T 33.0 48 0.0016 30.8 5.0 128 203-334 51-184 (233)
295 3mfq_A TROA, high-affinity zin 33.0 28 0.00095 33.2 3.5 71 250-331 164-243 (282)
296 3qja_A IGPS, indole-3-glycerol 32.9 74 0.0025 30.2 6.5 99 251-354 90-189 (272)
297 1wpc_A Glucan 1,4-alpha-maltoh 32.9 27 0.00091 35.7 3.5 30 306-335 76-105 (485)
298 1ud2_A Amylase, alpha-amylase; 32.7 27 0.00092 35.6 3.5 28 308-335 76-103 (480)
299 3etn_A Putative phosphosugar i 32.5 1.9E+02 0.0064 25.9 9.0 42 309-354 116-159 (220)
300 3nzo_A UDP-N-acetylglucosamine 32.5 2.6E+02 0.009 27.3 10.8 110 217-327 27-157 (399)
301 1mxg_A Alpha amylase; hyperthe 32.3 28 0.00095 35.2 3.5 29 307-335 81-109 (435)
302 1jeo_A MJ1247, hypothetical pr 32.2 1.8E+02 0.0061 24.7 8.5 103 213-356 28-134 (180)
303 1hvx_A Alpha-amylase; hydrolas 32.2 27 0.00094 36.0 3.5 30 306-335 75-104 (515)
304 2yva_A DNAA initiator-associat 31.7 2.5E+02 0.0085 24.1 12.2 56 290-354 105-163 (196)
305 2ptz_A Enolase; lyase, glycoly 30.9 1E+02 0.0036 31.1 7.6 88 245-334 284-375 (432)
306 2oz8_A MLL7089 protein; struct 30.5 1E+02 0.0035 30.4 7.4 77 250-332 219-296 (389)
307 1gcy_A Glucan 1,4-alpha-maltot 30.5 31 0.0011 35.7 3.6 29 307-335 87-115 (527)
308 4aie_A Glucan 1,6-alpha-glucos 30.2 26 0.0009 35.9 3.0 28 308-335 75-102 (549)
309 1chr_A Chloromuconate cycloiso 30.0 2.3E+02 0.0077 27.7 9.7 89 246-336 211-300 (370)
310 3nvt_A 3-deoxy-D-arabino-heptu 29.8 77 0.0026 31.8 6.2 90 270-359 245-355 (385)
311 3e48_A Putative nucleoside-dip 29.8 1.6E+02 0.0054 26.9 8.2 84 245-335 20-107 (289)
312 3uj2_A Enolase 1; enzyme funct 29.8 2.9E+02 0.01 28.1 10.7 96 236-334 293-392 (449)
313 2fym_A Enolase; RNA degradosom 29.7 1.6E+02 0.0054 29.6 8.7 97 236-335 271-371 (431)
314 4e38_A Keto-hydroxyglutarate-a 29.5 1.4E+02 0.0047 27.7 7.5 59 282-352 93-152 (232)
315 3fwz_A Inner membrane protein 29.5 2.3E+02 0.0078 23.0 8.7 115 226-353 8-124 (140)
316 1lwj_A 4-alpha-glucanotransfer 29.2 28 0.00097 35.0 3.0 28 308-335 65-92 (441)
317 2al1_A Enolase 1, 2-phospho-D- 29.1 1.2E+02 0.0041 30.8 7.7 88 244-333 284-373 (436)
318 2akz_A Gamma enolase, neural; 29.1 1.4E+02 0.0048 30.3 8.2 88 244-333 281-370 (439)
319 2ya0_A Putative alkaline amylo 28.6 28 0.00095 37.8 2.9 32 305-336 247-278 (714)
320 1wza_A Alpha-amylase A; hydrol 28.5 31 0.0011 35.2 3.1 27 309-335 78-104 (488)
321 1vmd_A MGS, methylglyoxal synt 28.3 65 0.0022 28.9 4.8 45 287-332 89-135 (178)
322 3bo9_A Putative nitroalkan dio 28.1 4E+02 0.014 25.4 12.2 82 270-353 120-204 (326)
323 4had_A Probable oxidoreductase 28.1 1E+02 0.0034 29.5 6.7 21 313-333 124-144 (350)
324 1xgk_A Nitrogen metabolite rep 28.1 2.4E+02 0.0081 27.0 9.4 95 227-326 7-103 (352)
325 2guy_A Alpha-amylase A; (beta- 28.0 31 0.001 35.1 3.0 31 306-336 91-121 (478)
326 2d59_A Hypothetical protein PH 28.0 52 0.0018 27.8 4.0 43 286-336 92-134 (144)
327 3ujp_A Mn transporter subunit; 28.0 1.2E+02 0.004 29.3 7.0 67 249-329 190-265 (307)
328 1tk9_A Phosphoheptose isomeras 27.9 2.8E+02 0.0095 23.5 10.0 53 290-353 106-160 (188)
329 1ht6_A AMY1, alpha-amylase iso 27.8 32 0.0011 34.2 3.1 29 308-336 64-92 (405)
330 1jae_A Alpha-amylase; glycosid 27.8 27 0.00093 35.6 2.5 31 305-335 67-97 (471)
331 4ina_A Saccharopine dehydrogen 27.6 1.8E+02 0.006 28.9 8.6 77 228-305 4-85 (405)
332 2dh2_A 4F2 cell-surface antige 27.6 33 0.0011 34.5 3.1 30 306-335 75-104 (424)
333 3otr_A Enolase; structural gen 27.4 1.2E+02 0.0042 31.0 7.3 96 235-333 284-383 (452)
334 2e8y_A AMYX protein, pullulana 27.3 24 0.00081 38.4 2.1 28 309-336 312-339 (718)
335 3kts_A Glycerol uptake operon 27.1 73 0.0025 28.8 5.0 43 283-331 17-59 (192)
336 3dhu_A Alpha-amylase; structur 27.1 35 0.0012 34.4 3.2 28 308-335 79-106 (449)
337 3ghf_A Septum site-determining 27.0 1.2E+02 0.0039 25.2 5.9 54 273-330 15-78 (120)
338 1g57_A DHBP synthase, 3,4-dihy 26.5 90 0.0031 28.8 5.6 34 297-331 168-201 (217)
339 1zl0_A Hypothetical protein PA 26.4 1.7E+02 0.0057 28.3 7.8 75 246-320 14-107 (311)
340 1sjd_A N-acylamino acid racema 26.4 1.7E+02 0.0057 28.5 8.0 88 246-335 205-293 (368)
341 3inp_A D-ribulose-phosphate 3- 26.3 2.3E+02 0.0079 26.4 8.5 105 245-353 105-222 (246)
342 3mio_A DHBP synthase, 3,4-dihy 26.1 95 0.0033 28.4 5.6 35 297-331 159-194 (206)
343 2z1k_A (NEO)pullulanase; hydro 26.0 34 0.0012 34.7 2.9 30 306-335 90-119 (475)
344 3ohs_X Trans-1,2-dihydrobenzen 25.8 1.2E+02 0.004 29.0 6.6 19 315-333 132-152 (334)
345 3nav_A Tryptophan synthase alp 25.8 1.7E+02 0.0059 27.7 7.6 81 250-332 127-214 (271)
346 3tqp_A Enolase; energy metabol 25.8 4.2E+02 0.014 26.7 11.0 96 236-334 267-366 (428)
347 1xvl_A Mn transporter, MNTC pr 25.6 1.3E+02 0.0044 29.1 6.9 68 249-330 204-280 (321)
348 3q58_A N-acetylmannosamine-6-p 25.5 3.8E+02 0.013 24.3 9.9 64 284-353 90-155 (229)
349 3f4w_A Putative hexulose 6 pho 25.5 2.2E+02 0.0077 24.8 8.1 101 250-353 79-186 (211)
350 2wc7_A Alpha amylase, catalyti 25.4 33 0.0011 35.1 2.6 28 308-335 98-125 (488)
351 3ffs_A Inosine-5-monophosphate 25.4 2.1E+02 0.0071 28.8 8.5 110 242-352 149-273 (400)
352 1lc0_A Biliverdin reductase A; 25.4 1.3E+02 0.0044 28.3 6.7 33 298-332 90-122 (294)
353 2aaa_A Alpha-amylase; glycosid 25.1 35 0.0012 34.8 2.8 31 306-336 91-121 (484)
354 1ccw_A Protein (glutamate muta 25.0 80 0.0027 26.4 4.7 75 258-334 15-93 (137)
355 4fb5_A Probable oxidoreductase 25.0 1.1E+02 0.0038 29.4 6.4 77 250-333 96-180 (393)
356 2aef_A Calcium-gated potassium 25.0 2.5E+02 0.0084 25.0 8.4 112 226-353 10-124 (234)
357 2i2x_B MTAC, methyltransferase 24.8 88 0.003 29.2 5.4 84 249-334 123-212 (258)
358 3kl4_A SRP54, signal recogniti 24.8 3E+02 0.01 27.8 9.7 91 245-336 121-224 (433)
359 3jva_A Dipeptide epimerase; en 24.6 4.5E+02 0.016 25.3 10.8 115 217-335 174-294 (354)
360 3rc1_A Sugar 3-ketoreductase; 24.5 1.2E+02 0.0042 29.2 6.5 19 314-332 128-146 (350)
361 4id9_A Short-chain dehydrogena 24.3 3.8E+02 0.013 24.9 10.0 87 227-327 21-118 (347)
362 3ecs_A Translation initiation 24.2 4.9E+02 0.017 25.1 11.7 100 226-332 122-229 (315)
363 4had_A Probable oxidoreductase 24.2 1.4E+02 0.0049 28.4 7.0 93 228-336 26-120 (350)
364 3usb_A Inosine-5'-monophosphat 24.2 1.5E+02 0.0051 30.7 7.4 148 204-353 216-387 (511)
365 2axq_A Saccharopine dehydrogen 24.1 2E+02 0.0069 29.3 8.3 96 227-329 25-139 (467)
366 1zh8_A Oxidoreductase; TM0312, 23.9 1.3E+02 0.0043 29.0 6.5 35 298-334 107-141 (340)
367 3mwd_B ATP-citrate synthase; A 23.8 1.2E+02 0.0041 29.8 6.2 60 274-336 81-141 (334)
368 1ua7_A Alpha-amylase; beta-alp 23.8 36 0.0012 34.1 2.5 27 309-335 71-97 (422)
369 3evn_A Oxidoreductase, GFO/IDH 23.8 1.3E+02 0.0045 28.5 6.6 18 314-331 106-123 (329)
370 3dip_A Enolase; structural gen 23.8 4.9E+02 0.017 25.7 11.0 114 217-334 204-324 (410)
371 3i4k_A Muconate lactonizing en 23.8 5.1E+02 0.017 25.3 11.1 116 217-336 185-306 (383)
372 3e82_A Putative oxidoreductase 23.7 1.2E+02 0.0041 29.4 6.4 9 250-258 69-77 (364)
373 1lu0_A CMTI-I, trypsin inhibit 23.6 18 0.0006 22.7 0.1 15 7-29 2-16 (29)
374 3kux_A Putative oxidoreductase 23.6 1.4E+02 0.0047 28.8 6.7 10 250-259 69-78 (352)
375 3hh8_A Metal ABC transporter s 23.6 65 0.0022 30.8 4.2 67 250-330 184-259 (294)
376 1pjq_A CYSG, siroheme synthase 23.6 2.7E+02 0.0093 28.1 9.2 93 226-334 13-106 (457)
377 3u3x_A Oxidoreductase; structu 23.4 1.2E+02 0.004 29.5 6.2 45 286-334 103-147 (361)
378 1ea9_C Cyclomaltodextrinase; h 23.4 43 0.0015 35.2 3.1 32 305-336 211-242 (583)
379 1m53_A Isomaltulose synthase; 23.4 40 0.0014 35.3 2.9 28 308-335 88-115 (570)
380 3cx3_A Lipoprotein; zinc-bindi 23.3 73 0.0025 30.2 4.5 68 248-329 176-252 (284)
381 1zja_A Trehalulose synthase; s 23.2 42 0.0014 35.0 3.0 28 308-335 75-102 (557)
382 3dqp_A Oxidoreductase YLBE; al 23.2 2.5E+02 0.0086 24.3 7.9 79 240-327 15-98 (219)
383 3gnn_A Nicotinate-nucleotide p 23.1 2.8E+02 0.0096 26.7 8.6 131 204-358 151-286 (298)
384 2wm3_A NMRA-like family domain 23.0 1.8E+02 0.0062 26.7 7.2 85 242-331 22-112 (299)
385 3bc9_A AMYB, alpha amylase, ca 23.0 48 0.0016 35.1 3.4 28 308-335 204-231 (599)
386 1snn_A DHBP synthase, 3,4-dihy 22.9 88 0.003 29.1 4.7 34 297-331 179-212 (227)
387 3v2g_A 3-oxoacyl-[acyl-carrier 22.9 1.9E+02 0.0064 26.6 7.3 77 227-303 32-116 (271)
388 2p2s_A Putative oxidoreductase 22.8 1.2E+02 0.0042 28.8 6.2 44 287-334 82-125 (336)
389 1uok_A Oligo-1,6-glucosidase; 22.7 42 0.0015 35.0 2.9 28 308-335 74-101 (558)
390 1cyg_A Cyclodextrin glucanotra 22.6 43 0.0015 36.0 3.0 28 308-335 107-134 (680)
391 3qvo_A NMRA family protein; st 22.5 2.8E+02 0.0096 24.4 8.3 91 228-327 25-117 (236)
392 1j0h_A Neopullulanase; beta-al 22.4 44 0.0015 35.1 3.0 31 306-336 216-246 (588)
393 2rdx_A Mandelate racemase/muco 22.4 2.7E+02 0.0093 27.1 8.7 85 246-335 212-297 (379)
394 3aie_A Glucosyltransferase-SI; 22.3 49 0.0017 36.8 3.4 30 307-336 687-716 (844)
395 1wzl_A Alpha-amylase II; pullu 22.3 42 0.0014 35.3 2.8 30 306-335 213-242 (585)
396 3igs_A N-acetylmannosamine-6-p 22.2 3.4E+02 0.012 24.7 8.8 64 284-353 90-155 (232)
397 3dhn_A NAD-dependent epimerase 22.2 3.8E+02 0.013 23.1 9.6 92 227-327 6-104 (227)
398 3edf_A FSPCMD, cyclomaltodextr 22.1 45 0.0015 35.2 3.0 28 308-335 194-221 (601)
399 1d3c_A Cyclodextrin glycosyltr 22.1 44 0.0015 35.9 3.0 30 306-335 109-138 (686)
400 3l4b_C TRKA K+ channel protien 22.0 3.9E+02 0.013 23.3 9.0 73 228-306 3-75 (218)
401 3gdo_A Uncharacterized oxidore 21.9 1.3E+02 0.0044 29.1 6.1 9 250-258 67-75 (358)
402 3eua_A Putative fructose-amino 21.9 1.4E+02 0.0047 28.8 6.3 90 211-330 9-105 (329)
403 3v7e_A Ribosome-associated pro 21.9 1.3E+02 0.0043 23.0 4.8 46 285-334 16-61 (82)
404 3m6w_A RRNA methylase; rRNA me 21.8 4.2E+02 0.014 27.0 10.2 84 226-312 103-186 (464)
405 3e18_A Oxidoreductase; dehydro 21.8 1.4E+02 0.0046 29.0 6.3 10 250-259 67-76 (359)
406 3is3_A 17BETA-hydroxysteroid d 21.7 1.7E+02 0.0059 26.7 6.7 76 227-302 19-102 (270)
407 1qho_A Alpha-amylase; glycosid 21.6 46 0.0016 35.8 3.0 29 307-335 102-130 (686)
408 2ze0_A Alpha-glucosidase; TIM 21.6 45 0.0015 34.8 2.8 28 308-335 74-101 (555)
409 2poz_A Putative dehydratase; o 21.6 1.6E+02 0.0054 29.0 6.8 112 219-334 192-309 (392)
410 3faw_A Reticulocyte binding pr 21.6 45 0.0015 37.3 2.9 31 305-335 362-392 (877)
411 2glx_A 1,5-anhydro-D-fructose 21.6 1.4E+02 0.0047 28.3 6.2 15 315-329 102-116 (332)
412 4fxs_A Inosine-5'-monophosphat 21.5 2E+02 0.0068 29.6 7.7 89 264-353 261-362 (496)
413 2gl5_A Putative dehydratase pr 21.5 3.9E+02 0.013 26.2 9.8 112 219-334 211-328 (410)
414 3rht_A (gatase1)-like protein; 21.5 1E+02 0.0035 29.1 5.1 78 252-332 8-86 (259)
415 3db2_A Putative NADPH-dependen 21.5 1.6E+02 0.0054 28.3 6.6 9 250-258 68-76 (354)
416 2zic_A Dextran glucosidase; TI 21.5 45 0.0015 34.7 2.7 28 308-335 74-101 (543)
417 4aef_A Neopullulanase (alpha-a 21.5 41 0.0014 35.8 2.5 60 270-336 248-309 (645)
418 3sgz_A Hydroxyacid oxidase 2; 21.5 1.6E+02 0.0055 29.1 6.7 91 262-353 205-300 (352)
419 1w6t_A Enolase; bacterial infe 21.4 1.4E+02 0.0049 30.1 6.5 97 236-335 283-383 (444)
420 2hnk_A SAM-dependent O-methylt 21.3 4.2E+02 0.014 23.3 11.2 51 208-258 44-94 (239)
421 2ya1_A Putative alkaline amylo 21.3 43 0.0015 38.0 2.7 30 306-335 555-584 (1014)
422 1mct_I Trypsin inhibitor A; co 21.2 19 0.00065 22.3 -0.1 15 7-29 2-16 (28)
423 4gqa_A NAD binding oxidoreduct 21.1 1.4E+02 0.0049 29.3 6.3 19 315-333 162-182 (412)
424 3i23_A Oxidoreductase, GFO/IDH 21.0 1.3E+02 0.0044 28.9 5.9 20 314-333 130-151 (349)
425 3q45_A Mandelate racemase/muco 21.0 4.1E+02 0.014 25.8 9.6 115 217-335 175-295 (368)
426 2xij_A Methylmalonyl-COA mutas 20.9 5E+02 0.017 28.4 10.9 82 250-333 605-693 (762)
427 1n0w_A DNA repair protein RAD5 20.7 3.1E+02 0.011 23.9 8.1 44 288-331 111-169 (243)
428 3bmv_A Cyclomaltodextrin gluca 20.7 49 0.0017 35.5 3.0 30 306-335 110-139 (683)
429 4a29_A Engineered retro-aldol 20.7 99 0.0034 29.3 4.7 96 251-351 81-177 (258)
430 2cvh_A DNA repair and recombin 20.6 4E+02 0.014 22.7 10.9 40 290-330 100-150 (220)
431 8abp_A L-arabinose-binding pro 20.6 1.3E+02 0.0043 27.6 5.5 64 263-332 21-89 (306)
432 1iv0_A Hypothetical protein; r 20.6 1.3E+02 0.0043 24.0 4.7 53 284-336 39-96 (98)
433 3c3p_A Methyltransferase; NP_9 20.6 4E+02 0.014 22.8 11.1 119 208-336 40-163 (210)
434 1tqj_A Ribulose-phosphate 3-ep 20.4 3.2E+02 0.011 24.7 8.2 100 250-353 87-200 (230)
435 1g5a_A Amylosucrase; glycosylt 20.3 58 0.002 34.7 3.4 27 309-335 159-185 (628)
436 1ff9_A Saccharopine reductase; 20.3 3.1E+02 0.011 27.6 8.8 97 227-330 5-120 (450)
437 3tj4_A Mandelate racemase; eno 20.3 4.4E+02 0.015 25.6 9.8 113 217-333 188-306 (372)
438 4aee_A Alpha amylase, catalyti 20.3 51 0.0017 35.5 2.9 28 308-335 307-334 (696)
439 4hkt_A Inositol 2-dehydrogenas 20.2 1.7E+02 0.0057 27.8 6.4 9 250-258 65-73 (331)
440 1ydw_A AX110P-like protein; st 20.1 1.7E+02 0.0057 28.2 6.5 43 286-332 86-128 (362)
441 3u3x_A Oxidoreductase; structu 20.0 1.3E+02 0.0044 29.2 5.7 95 227-336 28-122 (361)
No 1
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=100.00 E-value=1.5e-49 Score=416.25 Aligned_cols=301 Identities=84% Similarity=1.228 Sum_probs=276.1
Q ss_pred hhcccCCCccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhC
Q 013019 145 NEASFLSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEG 224 (451)
Q Consensus 145 ~~~~~~~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~g 224 (451)
++++|+...+|+++|+|...+++..++++.+|||+|+||.|++.++..+.+.++..+|.|+|+++|+.++||++|++++|
T Consensus 49 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~Pi~~t~t~~~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~lA~l~g 128 (445)
T 1qgn_A 49 KYASFLNSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEG 128 (445)
T ss_dssp CCCTTCCSHHHHHHHTTTTTCCSSCCSBSSCCBCCCSBBCBSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHHT
T ss_pred cccccCCCcccEEEecCCCCCcCCCCCCcCCCcccCCceecCCHHHHHhhhccccCCccccCCCChHHHHHHHHHHHHhC
Confidence 66777654499999999875321357899999999999999999887777766667899999999999999999999999
Q ss_pred CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCe-EEEEEe
Q 013019 225 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNV-SLFFTE 303 (451)
Q Consensus 225 ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~t-klV~le 303 (451)
.++.++++||++|+..++.+++++||+||++++.|++++..+...++..|+++.+++..|+++|+++++++ + ++|++|
T Consensus 129 ~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~-tv~lV~le 207 (445)
T 1qgn_A 129 AESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQK-KVNLFFTE 207 (445)
T ss_dssp CSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHS-CEEEEEEE
T ss_pred CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccC-CCCEEEEe
Confidence 99999999999999999999999999999999999999888776778889999999998999999999875 7 999999
Q ss_pred CCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH
Q 013019 304 SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL 383 (451)
Q Consensus 304 sPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~ 383 (451)
+|+||+|.+.|+++|.++|+++|+++|+|++|+.++.+.++++|+|++++|+||+++|++|+++|+++++++++++++..
T Consensus 208 ~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~ 287 (445)
T 1qgn_A 208 SPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNL 287 (445)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHH
T ss_pred CCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCcccccccccceEEEEEECHHHHHHHHHH
Confidence 99999999999999999999999999999999988888888899999999999999999988999999999999999888
Q ss_pred hHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcc
Q 013019 384 HHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTL 446 (451)
Q Consensus 384 ~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~l 446 (451)
+..+|..++++.+|+++++++++..|++++.++++.++++|+++|+|.+|+||++++||++++
T Consensus 288 ~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~ 350 (445)
T 1qgn_A 288 HHILGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHI 350 (445)
T ss_dssp HHHHCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHH
T ss_pred HHHhCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHH
Confidence 888898899999999999999999999999999999999999999999999999999997543
No 2
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=100.00 E-value=5.7e-50 Score=417.71 Aligned_cols=294 Identities=28% Similarity=0.413 Sum_probs=229.2
Q ss_pred CCCccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEE
Q 013019 150 LSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTV 229 (451)
Q Consensus 150 ~~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~v 229 (451)
|.+++|+++|+|...+ ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|+++|+.++||++|++++|.+.++
T Consensus 24 m~~~~t~~~h~~~~~~--~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v 101 (430)
T 3ri6_A 24 MRGFTTRALHVPKAKR--DVHGALRTPVYDNAAFEFENSDEIAQVSLGRALGHVYSRSSNPTVEDLEQRLKNLTGALGVL 101 (430)
T ss_dssp -CCHHHHHHCCC----------------------------------------------CCHHHHHHHHHHHHHHTCSEEE
T ss_pred cCCcchhheeCCCCCC--CCCCCcCCCcccccccccCCHHHHHHHhhcccCCccccCCCCHHHHHHHHHHHHHHCCCcEE
Confidence 3458999999997643 35789999999999999999988777666666789999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCc
Q 013019 230 IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPF 309 (451)
Q Consensus 230 v~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPt 309 (451)
+++||++|+..++.+++++||+|+++++.|++++..+...+...|+++.+++..|+++|+++++++ +++|++|+|+||+
T Consensus 102 ~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~~-t~~v~~e~p~Npt 180 (430)
T 3ri6_A 102 ALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDET-TKLLFLETISNPQ 180 (430)
T ss_dssp EESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCTT-EEEEEEESSCTTT
T ss_pred EECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCCC-CeEEEEECCCCCC
Confidence 999999999999999999999999999999999988776778889999999999999999999874 9999999999999
Q ss_pred cccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEe--CHHH-----------
Q 013019 310 LRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG--SGKL----------- 376 (451)
Q Consensus 310 G~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~--~~el----------- 376 (451)
|.+.|+++|+++|+++|++||+|++|+.+..++++.+|+|++++|+||+++||+++++|+++. +.++
T Consensus 181 G~~~dl~~i~~la~~~g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~ 260 (430)
T 3ri6_A 181 LQVADLEALSKVVHAKGIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYA 260 (430)
T ss_dssp CCCCCHHHHHHHHHTTTCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHH
T ss_pred CeecCHHHHHHHHHHcCCEEEEECCCcccccCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhh
Confidence 999999999999999999999999999998899999999999999999999999999999994 3222
Q ss_pred -------HHHHHH-HhHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcc
Q 013019 377 -------VTQIRN-LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTL 446 (451)
Q Consensus 377 -------i~~lr~-~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~l 446 (451)
+++++. ....+|..++++.+|+++++++++..|++++.+|+++++++|+++|.|++|+||+|++||++++
T Consensus 261 ~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~ 338 (430)
T 3ri6_A 261 KAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAI 338 (430)
T ss_dssp HHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHH
T ss_pred hhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHH
Confidence 334332 3456788899999999999999999999999999999999999999999999999999998664
No 3
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=100.00 E-value=6.4e-49 Score=407.80 Aligned_cols=292 Identities=26% Similarity=0.428 Sum_probs=269.9
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcc-cCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKR-RASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~-~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv 230 (451)
+++|+++|+|...+ ..++++++|||+|+||.|++.+++.+.+.++ ..+|.|+|+++|+.++||++||+++|++++++
T Consensus 25 ~~~t~~~~~~~~~~--~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~ 102 (415)
T 2fq6_A 25 KLDTQLVNAGRSKK--YTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVL 102 (415)
T ss_dssp CHHHHHHHTTCCHH--HHTTBSSCCBCCCSCBCCSSHHHHHHHHHTTTTTSCCCTTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CcCceeEeCCCCCC--CCCCCEeCCeecccceeeCCHHHHHHhhccccCCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Confidence 48899999997643 2478999999999999999998887766554 56799999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcc
Q 013019 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (451)
Q Consensus 231 ~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG 310 (451)
++||++|+.+++.+++++||+||++++.|++++..+...++..|+++++++..|+++|+++++++ |++|++|+|+||+|
T Consensus 103 ~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~-tklV~~e~~~NptG 181 (415)
T 2fq6_A 103 FPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPN-TKIVFLESPGSITM 181 (415)
T ss_dssp ESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTT-EEEEEEESSCTTTC
T ss_pred eCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccC-CcEEEEECCCCCCC
Confidence 99999999999999999999999999999999988877788889999999999999999999875 99999999999999
Q ss_pred ccccHHHHHHHHHh--cCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhC
Q 013019 311 RCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG 388 (451)
Q Consensus 311 ~v~DL~~IaelA~~--~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G 388 (451)
.+.|+++|+++|++ +|+++|+|++|+.++.+.|+++|+|++++|+||++++++++++|+++++++++++++..+...|
T Consensus 182 ~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G 261 (415)
T 2fq6_A 182 EVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMG 261 (415)
T ss_dssp CCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTT
T ss_pred EeecHHHHHHHHHhhcCCCEEEEECCCcccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcC
Confidence 99999999999999 9999999999999888888999999999999999999998889999999988898888877788
Q ss_pred CCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcc
Q 013019 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTL 446 (451)
Q Consensus 389 ~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~l 446 (451)
..++++.+|+++++++++..|++++.+|++.++++|+++|.|.+|+||+|++||++++
T Consensus 262 ~~~~~~~a~~~~~~l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~ 319 (415)
T 2fq6_A 262 QMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEF 319 (415)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHH
T ss_pred CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHH
Confidence 8899999999999999999999999999999999999999999999999999987543
No 4
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.5e-48 Score=401.02 Aligned_cols=291 Identities=32% Similarity=0.502 Sum_probs=271.2
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|+|... ..++++.+|||+|+||.|++.+++.+.+.++..+|.|+||++|+.++|+++|++++|.++++++
T Consensus 26 ~~~t~~~~~~~~~---~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~~~~~~~ 102 (414)
T 3ndn_A 26 SQATVGVRGGMLR---SGFEETAEAMYLTSGYVYGSAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFAT 102 (414)
T ss_dssp CHHHHHHHTTCCC---CTTCBSSCCBCCCSBBCCSSHHHHHHHHTTSSCCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CccceeeecCCCC---CCCCCcCCCcccCCceecCChHHHHHHHhCCcCCcCcCCCCChHHHHHHHHHHHHHCCCcEEEE
Confidence 5899999999764 2478999999999999999999888877777778999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+||++|+..++.+++++||+|+++++.|+++...+...+...|+++.+++..|+++|+++++++ +++|++|+|+||+|.
T Consensus 103 ~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~-t~~v~le~p~NptG~ 181 (414)
T 3ndn_A 103 ASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVP-TQAVFFETPSNPMQS 181 (414)
T ss_dssp SSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSC-CSEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCC-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999999888877778899999999999999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHH-HHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~-~lr~~~~~~G~~ 390 (451)
+.|+++|.++|+++|++||+|++|+++..+.++.+|+|++++|+||+++++|++++|+++++++.+. +++.....+|..
T Consensus 182 ~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~ 261 (414)
T 3ndn_A 182 LVDIAAVTELAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPA 261 (414)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCC
T ss_pred cccHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999887778889999999999999999999889999999998876 777777788999
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTL 446 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~l 446 (451)
++++.+|+++++++++..|++++.+|+++++++|+++|.|..|+||+|++||++++
T Consensus 262 ~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~ 317 (414)
T 3ndn_A 262 MSAFNAWVLLKGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDL 317 (414)
T ss_dssp CCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHH
Confidence 99999999999999999999999999999999999999999999999999998755
No 5
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=100.00 E-value=2.3e-47 Score=394.06 Aligned_cols=285 Identities=35% Similarity=0.582 Sum_probs=261.6
Q ss_pred CCccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 013019 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (451)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv 230 (451)
++++|+++|+|...+ ..++++++|||+++||.|++.+ +..+|.|+|++||+..+||++|++++|.+++++
T Consensus 18 ~~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~--------~~~~~~y~r~~~p~~~~l~~~la~l~g~~~~~~ 87 (400)
T 3nmy_A 18 LSLATLAIHGGQSPD--PSTGAVMPPIYATSTYAQSSPG--------EHQGFEYSRTHNPTRFAYERCVAALEGGTRAFA 87 (400)
T ss_dssp CCHHHHHHHTTCCCC--TTTCBSSCCBCCCSBBBCSBTT--------BSSSCCBTTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCcchheeeCCCCCC--CCCCCcCCCccccceeeccCcc--------ccCCcccccCCCHHHHHHHHHHHHHhCCCCEEE
Confidence 368999999998753 3588999999999999998753 345799999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHh-hhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCc
Q 013019 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV-LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPF 309 (451)
Q Consensus 231 ~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~-l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPt 309 (451)
++||++|+.+ +.+++++||+|+++++.|++++..+... ++..|+++.+++..|+++|+++++++ +++|++|+|+||+
T Consensus 88 ~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-~~~v~~e~~~np~ 165 (400)
T 3nmy_A 88 FASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRAD-TKMVWIETPTNPM 165 (400)
T ss_dssp ESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHCCTT-EEEEEEESSCTTT
T ss_pred ecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHhccC-CCEEEEECCCCCC
Confidence 9999999988 5778999999999999999998888777 77889999999999999999999874 9999999999999
Q ss_pred cccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeE-EEE-eCHHHHHHHHHHhHhh
Q 013019 310 LRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG-SIS-GSGKLVTQIRNLHHVL 387 (451)
Q Consensus 310 G~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG-~Iv-~~~eli~~lr~~~~~~ 387 (451)
|.+.|+++|.++|+++|+++|+|++|++++.+.++.+|+|++++|+||+++|+++.++| +++ .+++++++++.....+
T Consensus 166 G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~ 245 (400)
T 3nmy_A 166 LKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSI 245 (400)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHH
T ss_pred CeeecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999988888899999999999999999999988999 555 4778889999888889
Q ss_pred CCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 388 GGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 388 G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
|..++++.+|+++++++++..|++++.+|++.++++|+++|.|..|+||+|++||++++.
T Consensus 246 g~~~~~~~a~~~l~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~ 305 (400)
T 3nmy_A 246 GGVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLA 305 (400)
T ss_dssp CCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHH
T ss_pred CCCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHH
Confidence 999999999999999999999999999999999999999999999999999999987653
No 6
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=100.00 E-value=3.7e-45 Score=375.35 Aligned_cols=286 Identities=34% Similarity=0.529 Sum_probs=264.6
Q ss_pred CCccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 013019 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (451)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv 230 (451)
++++|+++|+|..++ ..++++.+|||++++|.+++.+ ....+|.|+|+++|+.++|+++|++++|.+++++
T Consensus 16 ~~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~-------~~~~~~~y~r~~~~~~~~l~~~la~~~g~~~~~~ 86 (392)
T 3qhx_A 16 AGLATRAIHSGYRPD--PATGAVNAPIYASSTFAQDGVG-------GLRGGYEYARTGNPTRTALEAALAAVEDAAFGRA 86 (392)
T ss_dssp CCHHHHHHHSSCCCC--TTTCBSSCCBCCCSBBCCSSTT-------CCBTTBCBTTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCcchhheeCCCCCC--CCCCCccCCcccCcceEecCcc-------cccCCccccCCCChHHHHHHHHHHHHhCCCcEEE
Confidence 457999999997753 3578999999999999998753 2334799999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcc
Q 013019 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (451)
Q Consensus 231 ~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG 310 (451)
++||++|+..++.+++++||+|+++++.|++++..+...+...|+++.+++..|+++|+++++++ +++|++|+|+||+|
T Consensus 87 ~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-~~~v~~~~~~nptG 165 (392)
T 3qhx_A 87 FSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPT-TRLIWVETPTNPLL 165 (392)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTT-EEEEEEESSCTTTC
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCC-CeEEEEECCCCCCc
Confidence 99999999999999999999999999999999888877788899999999999999999999874 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhCC
Q 013019 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG 389 (451)
Q Consensus 311 ~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G~ 389 (451)
.+.|+++|.++|+++|+++|+|++|+.++.++++.+|+|++++|+||++++++++++|+++++ ++++++++.....+|.
T Consensus 166 ~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~ 245 (392)
T 3qhx_A 166 SIADIAGIAQLGADSSAKVLVDNTFASPALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGA 245 (392)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCC
T ss_pred EEecHHHHHHHHHHcCCEEEEECCCcccccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999988899999999999999999999998899999997 5888999888888899
Q ss_pred CccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcc
Q 013019 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTL 446 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~l 446 (451)
..+++.+++++++++++..|++++.+++++++++|+++|.|..|+||++++||++.+
T Consensus 246 ~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~ 302 (392)
T 3qhx_A 246 VPGPFDAYLTMRGLKTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAV 302 (392)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHH
T ss_pred CCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHH
Confidence 999999999999999999999999999999999999999999999999999998644
No 7
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=100.00 E-value=4.4e-45 Score=373.82 Aligned_cols=291 Identities=32% Similarity=0.514 Sum_probs=267.4
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|+| . + ..++++++|||+++||.|++.+++.+.+.+...+|.|+|+++|+..+|+++|++++|.++++++
T Consensus 5 ~~~t~~~~~~-~-~--~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~i~~ 80 (389)
T 3acz_A 5 DITTTLLHPK-G-D--HVLHSHAYPIFQTSTFCFDSTQQGADLFMGKGEGHIYSRLGNPTVEQFEEMVCSIEGAAGSAAF 80 (389)
T ss_dssp CHHHHHHSCS-S-C--CSTTBSSCCBCCCSBBCCSSHHHHHHHHTTCSSCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcceeEEecC-C-C--CCCCCCCCCcccCCceecCChHHHHHhhcCCCCCcccCCCCChHHHHHHHHHHHHhCCCeEEEe
Confidence 4789999999 3 2 2478999999999999999998888777666678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+||++|+..++.+++++||+|+++++.|++++..+...++..|+++.+++..|+++|+++++++ +++|++|+|+||+|.
T Consensus 81 ~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~ 159 (389)
T 3acz_A 81 GSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPN-TKMVYLESPANPTCK 159 (389)
T ss_dssp SSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTT-EEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCCe
Confidence 9999999999999999999999999999998877766677889999999999999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCH-HHHHHHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~~G~~ 390 (451)
+.|+++|.++|+++|+++|+|++|+.++.+.++++|+|++++|+||+++++++.++|++++++ +++++++.....+|..
T Consensus 160 ~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~ 239 (389)
T 3acz_A 160 VSDIKGIAVVCHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSL 239 (389)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCC
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCccccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999988777888899999999999999999977779999998 9999998887778888
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
++++.+|+++++++++..|++++.++++.++++|++++.|+.++||+|+++|+..++
T Consensus 240 ~~~~~~~~~~~~l~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~ 296 (389)
T 3acz_A 240 MAPMDAFLCARGMKTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIA 296 (389)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHH
T ss_pred CCHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHH
Confidence 999999999999999999999999999999999999999999999999999876543
No 8
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=100.00 E-value=1.4e-44 Score=372.83 Aligned_cols=283 Identities=32% Similarity=0.538 Sum_probs=249.1
Q ss_pred CccccccccCCcCCCCCCC-CCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 013019 152 SDGSLAIHAGERLGRGIVT-DAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~-~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv 230 (451)
+++|+++|+|...+ ..+ +++.+|||+++||.+++..+ ..+|.|+||+||+..+||++|++++|.+++++
T Consensus 18 ~~~t~~~h~g~~~~--~~~~~~~~~pi~~stt~~~~~~~~--------~~~~~y~r~~~p~~~~l~~~la~~~g~~~~i~ 87 (403)
T 3cog_A 18 HFATQAIHVGQDPE--QWTSRAVVPPISLSTTFKQGAPGQ--------HSGFEYSRSGNPTRNCLEKAVAALDGAKYCLA 87 (403)
T ss_dssp THHHHHHHTTCCGG--GSTTCBSSCCBCCCSCBCCC----------------------CHHHHHHHHHHHHHHTCSEEEE
T ss_pred CcccEEEeCCCCCC--cCCCCCccCCeeccceeecCCccc--------cCCCcccCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 57899999997643 246 89999999999999887532 12588999999999999999999999989999
Q ss_pred eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcc
Q 013019 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (451)
Q Consensus 231 ~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG 310 (451)
++||++|+..++. ++++||+|+++++.|++++..+...++..|+++.+++..|+++|++++++ ++++|++|+|+||+|
T Consensus 88 ~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~-~t~~v~~~~p~nptG 165 (403)
T 3cog_A 88 FASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITP-ETKLVWIETPTNPTQ 165 (403)
T ss_dssp ESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCT-TEEEEEEESSCTTTC
T ss_pred ECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCC
Confidence 9999999999998 89999999999999999888777777888999999998899999999987 499999999999999
Q ss_pred ccccHHHHHHHHHhcC-CEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhC
Q 013019 311 RCVDVKLVSDLCHKKG-AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG 388 (451)
Q Consensus 311 ~v~DL~~IaelA~~~g-~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G 388 (451)
.+.|+++|+++|+++| +++|+|++|+.+..+.++.+|+|++++|+||+++|++++++|+++++ ++++++++.....+|
T Consensus 166 ~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g 245 (403)
T 3cog_A 166 KVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLG 245 (403)
T ss_dssp CCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHC
T ss_pred eeeCHHHHHHHHHHcCCCEEEEECCCcccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcC
Confidence 9999999999999999 99999999999887788889999999999999999998889999984 788899988888888
Q ss_pred CCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcc
Q 013019 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTL 446 (451)
Q Consensus 389 ~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~l 446 (451)
..++++.+|+++++++++..|++++.+|+..++++|+++|.|+.+.||+|+++|+..+
T Consensus 246 ~~~~~~~~~~~~~~l~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~ 303 (403)
T 3cog_A 246 AVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHEL 303 (403)
T ss_dssp CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHH
T ss_pred CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHH
Confidence 8899999999999999999999999999999999999999999999999999987654
No 9
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=100.00 E-value=5.2e-42 Score=351.45 Aligned_cols=293 Identities=34% Similarity=0.501 Sum_probs=238.5
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|+|...+ ..++++.+|+|+++||.++...+....+.+...+|.|+|+++|..++|+++|++++|.++++++
T Consensus 9 ~~~t~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~~~~i~~ 86 (398)
T 1gc0_A 9 GFATRAIHHGYDPQ--DHGGALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLAL 86 (398)
T ss_dssp CHHHHHHHTTCCGG--GGTTBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcCceeEeCCCCCC--CCCCCcCCCccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 57899999997643 3578999999999999999877665545555567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+||++|+..++.+++++||+|+++++.|+++...+...+...|+++.+++..|+++|++++++ ++++|++++|+||+|.
T Consensus 87 ~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 165 (398)
T 1gc0_A 87 ASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTP-ATRVIYFESPANPNMH 165 (398)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCT-TEEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCcc
Confidence 999999999999999999999999999999887776666778999999998899999999987 4999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHH-HHHHHhHh-hCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHV-LGG 389 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~-~lr~~~~~-~G~ 389 (451)
+.|+++|.++|+++|+++|+|++|+.+....++.+|+|+++.|+||+++++++.++|++++++++++ .++..... +|.
T Consensus 166 ~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~ 245 (398)
T 1gc0_A 166 MADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGA 245 (398)
T ss_dssp CCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCC
T ss_pred cccHHHHHHHHHHcCCEEEEECCCcccccCCchhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCC
Confidence 9999999999999999999999998776666778899999999999999998777899999988776 56666666 777
Q ss_pred CccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCccc
Q 013019 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTLV 447 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~lv 447 (451)
.+++..+++++++++++..|++++.+|++.++++|+++|.|+.++||+|+++|+.+++
T Consensus 246 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~ 303 (398)
T 1gc0_A 246 VLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLA 303 (398)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC-----------
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHH
Confidence 8899999999999999999999999999999999999999999999999999876654
No 10
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=1.2e-41 Score=352.27 Aligned_cols=291 Identities=29% Similarity=0.386 Sum_probs=255.3
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|+|...+ ..++++.+|||+|+||.+++.++..+.+.++..+|.|+|+.+|+..+|+++|++++|.+.++++
T Consensus 2 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~v~~ 79 (421)
T 2ctz_A 2 RFETLQLHAGYEPE--PTTLSRQVPIYPTTSYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGKAALAT 79 (421)
T ss_dssp CHHHHHHHTTCCCC--TTTCBSSCCBCCCSCBCCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcceeeeeCCCCCC--cCCCCccCCeeccceeeeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHhCCCceEEe
Confidence 47899999997643 3478999999999999999998877766656668999999999999999999999999889999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe-CCCCHHHHHHhhcCCCeEEEEEeCCCCCcc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI-DPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v-d~~D~d~Le~ai~~~~tklV~lesPsNPtG 310 (451)
+||++|+..++.+++++||+|+++.+.|+++...+...+...|+++.++ +..|+++|++++++ ++++|++++|+||+|
T Consensus 80 ~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~n~~G 158 (421)
T 2ctz_A 80 ASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDE-KTRAWWVESIGNPAL 158 (421)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCT-TEEEEEEESSCTTTC
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhcc-CCeEEEEECCCCCCC
Confidence 9999999999999999999999999999998877655567789999999 88899999999987 499999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEecCC-CCCCccccccCCCcEEEECCcccCCccccceeEEEEeC--HHH----HHHHH--
Q 013019 311 RCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS--GKL----VTQIR-- 381 (451)
Q Consensus 311 ~v~DL~~IaelA~~~g~~lVVD~tf-a~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~--~el----i~~lr-- 381 (451)
.+.|+++|.++|+++|+++|+|+++ +.++..+++..|+|++++|++|+++++++.+||+++.+ .++ +++++
T Consensus 159 ~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~ 238 (421)
T 2ctz_A 159 NIPDLEALAQAAREKGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEP 238 (421)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSC
T ss_pred cccCHHHHHHHHHHcCCEEEEECCcccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccc
Confidence 9999999999999999999999999 87776778888999999999999999987778888873 222 11221
Q ss_pred -----------------------H-HhHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCC
Q 013019 382 -----------------------N-LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITL 437 (451)
Q Consensus 382 -----------------------~-~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPg 437 (451)
. ....+|..++++.+|+++++++++..|++++.+++++++++|+++|+|+.|.||+
T Consensus 239 ~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~ 318 (421)
T 2ctz_A 239 QPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPG 318 (421)
T ss_dssp BGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTT
T ss_pred cchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCC
Confidence 1 1234677889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCc
Q 013019 438 LLCFYNGT 445 (451)
Q Consensus 438 L~~~p~~~ 445 (451)
+++||+++
T Consensus 319 ~~~~~~~~ 326 (421)
T 2ctz_A 319 LPHHPHHD 326 (421)
T ss_dssp STTCTTHH
T ss_pred CCCCCCHH
Confidence 99888653
No 11
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=4.3e-41 Score=346.41 Aligned_cols=292 Identities=30% Similarity=0.493 Sum_probs=261.9
Q ss_pred CCccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 013019 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (451)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv 230 (451)
|+++|+++|+|.. + ..++++.+|+|+++++.++...+..+.+.+....|.|+|.++|+.++|+++|++++|.++.++
T Consensus 6 ~~~~t~~~~~~~~-~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~l~~~ia~~~g~~~~i~ 82 (404)
T 1e5e_A 6 MTPATACIHANPQ-K--DQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTEACVA 82 (404)
T ss_dssp CCHHHHHHHSSCC-C--CTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCccceeeecCCC-C--CCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcChHHHHHHHHHHHHhCCCcEEE
Confidence 4578999999975 3 246899999999999999988776665555566799999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcc
Q 013019 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (451)
Q Consensus 231 ~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG 310 (451)
+++|++|+..++.+++++||+|+++++.|+++...+...++..|+++.+++..|+++|+++++++ +++|++|+|+||+|
T Consensus 83 ~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-t~~v~l~~p~NptG 161 (404)
T 1e5e_A 83 TSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPN-TKIVYFETPANPTL 161 (404)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTT-EEEEEEESSCTTTC
T ss_pred eCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCC-CcEEEEECCCCCCC
Confidence 99999999999999999999999999999998876655677789999999988999999999874 99999999999999
Q ss_pred ccccHHHHHHHHHh-cCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHH-HHHHHhHhh-
Q 013019 311 RCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVL- 387 (451)
Q Consensus 311 ~v~DL~~IaelA~~-~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~-~lr~~~~~~- 387 (451)
.+.|+++|.++|++ +|+++|+|++|+.+....++++|+|++++|+||+++++++.++|++++++++++ +++..+..+
T Consensus 162 ~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~ 241 (404)
T 1e5e_A 162 KIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDIT 241 (404)
T ss_dssp CCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCC
T ss_pred cccCHHHHHHHHHhhcCCEEEEECCCchhhhCCccccCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCC
Confidence 99999999999999 999999999999887667778899999999999999998665799999999888 787776666
Q ss_pred CCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcc
Q 013019 388 GGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTL 446 (451)
Q Consensus 388 G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~l 446 (451)
|..++++.+++++++++++..|++++.+|++.++++|++++.|..+.||+|+++|+..+
T Consensus 242 g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~ 300 (404)
T 1e5e_A 242 GSVISPHDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDI 300 (404)
T ss_dssp CCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHH
T ss_pred CCCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHH
Confidence 77789999999999999999999999999999999999999999999999999986543
No 12
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=3.3e-41 Score=346.29 Aligned_cols=280 Identities=32% Similarity=0.516 Sum_probs=251.5
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|.|...+ .++++.+|||+++||.|++.+ .....|.|+|+++|..++|+++|++++|.++.+++
T Consensus 7 ~~~t~~~~~~~~~~---~~~~~~~pi~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~lr~~la~~~g~~~~i~~ 76 (393)
T 1n8p_A 7 KFATKAIHAGEHVD---VHGSVIEPISLSTTFKQSSPA-------NPIGTYEYSRSQNPNRENLERAVAALENAQYGLAF 76 (393)
T ss_dssp CHHHHHHHTTCCCC---SSCCSSCCBCCCSBCCBSSSS-------SBSSSCCBTTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CccceEEecCCCcc---CCCCcCCCcccccceeecccc-------ccccCcceecCCChhHHHHHHHHHHHhCCCcEEEE
Confidence 57899999997643 478999999999999997643 12246899999999999999999999999899999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+||++|+..++. ++++||+|+++.+.|++++..+...++..|+++.+++..| ++|+++++++ +++|++++|+||+|.
T Consensus 77 ~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-~~l~~~i~~~-t~lv~~~~~~nptG~ 153 (393)
T 1n8p_A 77 SSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLL-NDLPQLIKEN-TKLVWIETPTNPTLK 153 (393)
T ss_dssp SCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHH-HHHHHHSCSS-EEEEEECSSCTTTCC
T ss_pred CChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCCh-HHHHHhcccC-ceEEEEECCCCCcce
Confidence 999999999999 9999999999999999888777667788899999998878 9999999874 999999999999999
Q ss_pred cccHHHHHHHHHhc----CCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHh
Q 013019 312 CVDVKLVSDLCHKK----GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHV 386 (451)
Q Consensus 312 v~DL~~IaelA~~~----g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~ 386 (451)
+.|+++|.++|+++ |+++|+|++|+.+...++..+|+|++++|+||++++++++++|+++++ ++++++++..+..
T Consensus 154 ~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~~~~~~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~ 233 (393)
T 1n8p_A 154 VTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNA 233 (393)
T ss_dssp CCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHhCCCCCCEEEEeCCccccccCCHHHcCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHh
Confidence 99999999999999 999999999987655567778999999999999999988788999985 7899999888777
Q ss_pred hCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEecCCCCCCCCC
Q 013019 387 LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPK-VLLLFITLLLCFYNG 444 (451)
Q Consensus 387 ~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~-V~~V~yPgL~~~p~~ 444 (451)
+|..+++..++++.++++++..|++++.+|++.++++|+++|. +..+.||+++++|++
T Consensus 234 ~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~ 292 (393)
T 1n8p_A 234 IGAIPSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNY 292 (393)
T ss_dssp HCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTH
T ss_pred cCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccH
Confidence 8888899999999999999999999999999999999999998 999999999988764
No 13
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-39 Score=335.09 Aligned_cols=287 Identities=32% Similarity=0.455 Sum_probs=253.5
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
+++|+++|+|...+ .++++++|||++++|.|++.+++.+.+. ...+|.|+|++++..+++++++++++|.++++++
T Consensus 2 ~~~t~~~~~~~~~~---~~~~~~~pi~~s~~~~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~~~~ 77 (412)
T 2cb1_A 2 EYTTLAVLAGLPED---PHGAVGLPIYAVAAYGFKTLEEGQERFA-TGEGYVYARQKDPTAKALEERLKALEGALEAVVL 77 (412)
T ss_dssp CHHHHHHHTTCCCC---TTCCSSCCCCCCSBCCCSSHHHHHHHHH-HCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CccceeeecCCCcC---CCCCcCCCccccceeecCChHHHHHHhc-cccCcCcCCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 57899999997642 4789999999999999999988777654 4467899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
++|++|+..++.+++++||+|+++++.|++++..+...++..|+++.+++. |+++|+++++++ +++|++++|+||+|.
T Consensus 78 ~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~l~~~i~~~-~~~v~~~~~~n~~G~ 155 (412)
T 2cb1_A 78 ASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDP-EPEAVREALSAK-TRAVFVETVANPALL 155 (412)
T ss_dssp SSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECS-SHHHHHHHCCTT-EEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-CHHHHHHHhccC-CeEEEEeCCCCCCcc
Confidence 999999999999999999999999999998887766667778999999886 499999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEEECCcccCCccccceeEEEEeCH----------------
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG---------------- 374 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~---------------- 374 (451)
+.|+++|.++|+++|+++|+|++++.+ +...++..++|+++.|+||+++++++.+||+++.++
T Consensus 156 ~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 235 (412)
T 2cb1_A 156 VPDLEALATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLK 235 (412)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC---
T ss_pred cccHHHHHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccccCCCCcEEEEEEecccccccccccccccccc
Confidence 999999999999999999999999887 667777889999999999999999877788887773
Q ss_pred -----------HHHHHHHHHh-HhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCC
Q 013019 375 -----------KLVTQIRNLH-HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFY 442 (451)
Q Consensus 375 -----------eli~~lr~~~-~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p 442 (451)
++.++++... ...|..+.+..+++++++++++..+++++.++++.++++|.++|+|..|+||++++||
T Consensus 236 g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p 315 (412)
T 2cb1_A 236 GQIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDP 315 (412)
T ss_dssp ----HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCT
T ss_pred ccchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCc
Confidence 4556666554 4456677899999999999999999999999999999999999999999999999887
Q ss_pred CC
Q 013019 443 NG 444 (451)
Q Consensus 443 ~~ 444 (451)
++
T Consensus 316 ~~ 317 (412)
T 2cb1_A 316 AH 317 (412)
T ss_dssp TH
T ss_pred cH
Confidence 54
No 14
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=100.00 E-value=1.1e-38 Score=326.28 Aligned_cols=292 Identities=35% Similarity=0.583 Sum_probs=256.6
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
++.|+++|+|...+ ....++..|++.++++.++...+....+.+....|.|+|++++..++|++++++++|.++.+++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~i~~ 85 (398)
T 2rfv_A 8 GFNTQIVHAGQQPD--PSTGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLAT 85 (398)
T ss_dssp CHHHHHHHTTCCCC--TTTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCceeEeecCCcCc--cCCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 57899999997643 2467899999999999999887765544455567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
++|++|+..++.+++++||+|+++++.|+++...+...+...|+++.+++..|+++|++++++ ++++|++++|+||+|.
T Consensus 86 ~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 164 (398)
T 2rfv_A 86 ASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRP-ETKVVYIETPANPTLS 164 (398)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCT-TEEEEEEESSBTTTTB
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCC-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999999887765556778999999998899999999987 4999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHH-HHHHHhHhh-CC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVL-GG 389 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~-~lr~~~~~~-G~ 389 (451)
+.|+++|.++|+++|+++|+|++|+.+....++.+|+|+++.|+||+++++++.++|++++++++++ .++.....+ |.
T Consensus 165 ~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 244 (398)
T 2rfv_A 165 LVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGG 244 (398)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCC
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999877667778899999999999999988666799999998887 677666666 77
Q ss_pred CccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcc
Q 013019 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTL 446 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~l 446 (451)
.++++.++.+.++++.+..+++++.+|++.+.++|++++.|+.+.||+|+++|+.++
T Consensus 245 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~ 301 (398)
T 2rfv_A 245 CMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYEL 301 (398)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHH
T ss_pred CCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHH
Confidence 889999999999999999999999999999999999999999999999998875443
No 15
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=2.9e-38 Score=321.44 Aligned_cols=284 Identities=30% Similarity=0.496 Sum_probs=251.3
Q ss_pred CCccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 013019 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (451)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv 230 (451)
++++|+++|.|...+ ..++++.+|||++++|.|++.+ ...+|.|+||++|...+|+++|+++++.++.++
T Consensus 3 ~~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~ 72 (386)
T 1cs1_A 3 RKQATIAVRSGLNDD--EQYGCVVPPIHLSSTYNFTGFN--------EPRAHDYSRRGNPTRDVVQRALAELEGGAGAVL 72 (386)
T ss_dssp CCHHHHHHHTTTTCC--TTTCBSSCCBCCCSBBCCSBTT--------BCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCcceeEEecCCCcc--ccCCCCCCCccccceeeccccC--------CCCCcceeCCCCccHHHHHHHHHHHhCCCcEEE
Confidence 357899999997532 3478999999999999987542 235689999999999999999999999889999
Q ss_pred eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcc
Q 013019 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (451)
Q Consensus 231 ~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG 310 (451)
+++|++|+..++.+++++||+|+++++.|++++..+...++..|+++.+++..|+++|+++++++ +++|++++|+||+|
T Consensus 73 ~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG 151 (386)
T 1cs1_A 73 TNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEK-PKLVLVESPSNPLL 151 (386)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTC-CSEEEEECSCTTTC
T ss_pred eCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhccC-CcEEEEeCCCCCCC
Confidence 99999999999999999999999999999988776656667789999999988999999999874 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCH-HHHHHHHHHhHhhCC
Q 013019 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGG 389 (451)
Q Consensus 311 ~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~~G~ 389 (451)
.+.|+++|.++|+++|+++|+|++++.+....++.+++|+++.|++|++++++.+++|++++++ +++++++.....++.
T Consensus 152 ~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~ 231 (386)
T 1cs1_A 152 RVVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGV 231 (386)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999877655667789999999999999988866679999886 888998887777777
Q ss_pred CccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCc
Q 013019 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGT 445 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~ 445 (451)
..++..++.++++++++..++++..++++.+.++|++++.++.+.+|+|.++|+..
T Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~ 287 (386)
T 1cs1_A 232 TGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHE 287 (386)
T ss_dssp BCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHH
T ss_pred CCCHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHH
Confidence 78899999888899999889999999999999999999999999999998887543
No 16
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=100.00 E-value=1.5e-36 Score=319.32 Aligned_cols=282 Identities=31% Similarity=0.553 Sum_probs=248.8
Q ss_pred CccccccccCCcCCCCCCCCCccCCccccCCCccCCHHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 013019 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (451)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~ 231 (451)
.++|.++|.+... +..+++.+||+++.++.++... ....|.|+|+++|.++++++++++++|.++++++
T Consensus 86 ~~~~~~i~l~~g~---~~~~~~~~~i~~a~~~~~~~~~--------~~~~~~Y~~~g~~~~~~l~~~la~~~g~~~~i~~ 154 (464)
T 1ibj_A 86 SVSTLLVNLDNKF---DPFDAMSTPLYQTATFKQPSAI--------ENGPYDYTRSGNPTRDALESLLAKLDKADRAFCF 154 (464)
T ss_dssp CHHHHHTCCCCSS---CTTCCSSCCCCCCSBCCCSSSS--------CCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcCCeEEECCCCC---CCCCCCCccHHhhhhhhhhccc--------ccCCccccCCCCHHHHHHHHHHHHHhCCCeEEEE
Confidence 4678899987642 1356899999999998765431 2346889999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
++|++|+.+++. ++++||+|+++++.|+++...+...++..|+++.+++..|+++|+++++++ +++|++++|+||+|.
T Consensus 155 ~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~-tk~v~l~~p~NptG~ 232 (464)
T 1ibj_A 155 TSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQ-TKLVWLESPTNPRQQ 232 (464)
T ss_dssp SSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCSS-EEEEEECSSCTTTCC
T ss_pred CCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccC-ceEEEEeCCCCCCCE
Confidence 999999988775 889999999999999998776666677889999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEeCH-HHHHHHHHHhHhhCCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA 390 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~~G~~ 390 (451)
+.|+++|.++|+++|+++|+|++|+.+....++++|+|++++|+||+++|++++++|++++++ +++++++..+...|..
T Consensus 233 v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~ 312 (464)
T 1ibj_A 233 ISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSG 312 (464)
T ss_dssp CCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCB
T ss_pred eecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999887666777889999999999999998777889999984 7888888877777888
Q ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcc
Q 013019 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTL 446 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~l 446 (451)
++++.+++++++++++..|++++.+++..++++|++++.++.+.|++|+++|+..+
T Consensus 313 ~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~ 368 (464)
T 1ibj_A 313 LAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHL 368 (464)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHH
T ss_pred CCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHH
Confidence 89999999999999999999999999999999999999999999999999886543
No 17
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=100.00 E-value=1.2e-34 Score=302.04 Aligned_cols=240 Identities=18% Similarity=0.245 Sum_probs=212.0
Q ss_pred CCccccCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHHccCCCeEEEcC-CCCcchHHHH-------HH
Q 013019 200 ASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFI-------ET 268 (451)
Q Consensus 200 ~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv---~sSG~aAi~~al~all~~GD~VIv~~-~~Y~~t~~~l-------~~ 268 (451)
.+|.|+| +.++.||+++|+++|.+.+++ ++||++|+..++.+++++||+|++++ +.|+++..++ ..
T Consensus 66 ~gy~y~~---~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~ 142 (427)
T 3i16_A 66 SGYGYGD---IGRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMG 142 (427)
T ss_dssp CTTCTTC---HHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSC
T ss_pred CCCCCCH---HHHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHH
Confidence 3566655 468999999999999999998 89999999999999999999999999 9999988666 24
Q ss_pred hhhcCCcEEEEeCC-----CCHHHHHHhhcC-CCeEEEEEeC----CCCCccccccHHHHHHHHHh--cCCEEEEecCCC
Q 013019 269 VLPKMGITATVIDP-----ADMEGLEAALNN-NNVSLFFTES----PTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFA 336 (451)
Q Consensus 269 ~l~~~Gi~v~~vd~-----~D~d~Le~ai~~-~~tklV~les----PsNPtG~v~DL~~IaelA~~--~g~~lVVD~tfa 336 (451)
.+...|+++++++. .|+++|++++++ .++++|++++ |+||+|.+.|+++|+++|++ +|+++++|++|+
T Consensus 143 ~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~ 222 (427)
T 3i16_A 143 SLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYG 222 (427)
T ss_dssp CTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTT
T ss_pred HHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCc
Confidence 56778999999886 689999999982 2599999999 99999999999999999999 999999999999
Q ss_pred CCC-ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh--HhhCCCccH-HH-HHHHHHhhHHHHHHHH
Q 013019 337 TPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNP-NA-AYLIIRGMKTLHLRVQ 411 (451)
Q Consensus 337 ~~~-~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~--~~~G~~ls~-~~-a~l~lrgL~tl~~Rl~ 411 (451)
.+. ..+|+.+|+|++++|+||+++|+++.++|+++++++++++++... ..+|..+++ ++ ++++++++++++.|++
T Consensus 223 ~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~~~~~r~~ 302 (427)
T 3i16_A 223 EFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLFLAPHISM 302 (427)
T ss_dssp TTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHH
T ss_pred cccccCCccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCCccHHHHHHHHHHHHHHHHHHH
Confidence 887 678888999999999999999998888999999999999998743 344544455 55 8999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcc
Q 013019 412 QQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTL 446 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~l 446 (451)
++.+|+..++++|++++. .| ||+ ++||.+.+
T Consensus 303 ~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~~~~ 333 (427)
T 3i16_A 303 EALKGAILCSRIMELAGF--EV-MPK-YDEKRSDI 333 (427)
T ss_dssp HHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS
T ss_pred HHHHHHHHHHHHHHhCCC--ee-cCC-CCCCCccE
Confidence 999999999999999987 77 999 89998775
No 18
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=7.5e-34 Score=295.98 Aligned_cols=239 Identities=17% Similarity=0.220 Sum_probs=210.2
Q ss_pred CCccccCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHHccCCCeEEEcC-CCCcchHHHHH-------H
Q 013019 200 ASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE-------T 268 (451)
Q Consensus 200 ~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv---~sSG~aAi~~al~all~~GD~VIv~~-~~Y~~t~~~l~-------~ 268 (451)
.+|.|+|+ .++.||+++|+++|.+.+++ ++||++|+.+++.+++++||+|++.+ +.|+++..++. .
T Consensus 67 ~gy~Y~~~---g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~ 143 (427)
T 3hvy_A 67 SGYGYNDI---GRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVG 143 (427)
T ss_dssp CTTCTTCH---HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSC
T ss_pred cCCCCCch---hHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhh
Confidence 45667665 58999999999999999999 89999999999999999999999999 99998876652 4
Q ss_pred hhhcCCcEEEEeCC----CCHHHHHHhhc--CCCeEEEEEeC----CCCCccccccHHHHHHHHHh--cCCEEEEecCCC
Q 013019 269 VLPKMGITATVIDP----ADMEGLEAALN--NNNVSLFFTES----PTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFA 336 (451)
Q Consensus 269 ~l~~~Gi~v~~vd~----~D~d~Le~ai~--~~~tklV~les----PsNPtG~v~DL~~IaelA~~--~g~~lVVD~tfa 336 (451)
.++..|+++.+++. .|+++|+++++ + ++|+|++++ |+||+|.+.|+++|+++|++ +|+++++|++|+
T Consensus 144 ~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~-~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~ 222 (427)
T 3hvy_A 144 SLREYGVKYKMVDLKDGKVDINTVKEELKKDD-SIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYG 222 (427)
T ss_dssp CTGGGTCEEEECCCBTTBCCHHHHHHHHHHCT-TEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred HHHHcCCEEEEecCCCCCcCHHHHHHHhhCCC-CCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence 56678999999987 79999999998 5 599999999 99999999999999999999 899999999999
Q ss_pred CCC-ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH--hhCCCcc--HHHHHHHHHhhHHHHHHHH
Q 013019 337 TPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALN--PNAAYLIIRGMKTLHLRVQ 411 (451)
Q Consensus 337 ~~~-~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--~~G~~ls--~~~a~l~lrgL~tl~~Rl~ 411 (451)
.+. ..+|+.+|+|++++|+||+++|+++.+||+++++++++++++.... .+|..++ ...++++++++++++.|++
T Consensus 223 ~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~~~r~~ 302 (427)
T 3hvy_A 223 EFVEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFMAPHVTI 302 (427)
T ss_dssp TTTSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCcccCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhHHHHHHH
Confidence 887 6788899999999999999999988889999999999999987542 3332222 2348999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcc
Q 013019 412 QQNSTALRMAEILEAHPKVLLLFITLLLCFYNGTL 446 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~l 446 (451)
++.+|+..++++|++++. .| ||+ ++||.+.+
T Consensus 303 ~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~~~l 333 (427)
T 3hvy_A 303 EAVKGAVFCARIMELAGF--DV-LPK-YNDKRTDI 333 (427)
T ss_dssp HHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS
T ss_pred HHHHHHHHHHHHHHhCCC--ee-cCC-CCCCCceE
Confidence 999999999999999986 67 899 88988775
No 19
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=100.00 E-value=2.2e-33 Score=290.84 Aligned_cols=239 Identities=15% Similarity=0.170 Sum_probs=206.9
Q ss_pred CCccccCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHHccCCCeEEEcC-CCCcchHHHHH------Hh
Q 013019 200 ASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------TV 269 (451)
Q Consensus 200 ~~~~Y~R~~npt~~~Lee~LA~l~gae~~vv---~sSG~aAi~~al~all~~GD~VIv~~-~~Y~~t~~~l~------~~ 269 (451)
.+|.|+| +.++.||+++|+++|.+.+++ ++||++|+..++.+++++||+|++++ +.|+++...+. ..
T Consensus 52 ~~~~y~~---~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~ 128 (409)
T 3jzl_A 52 TGYGYDD---EGRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGS 128 (409)
T ss_dssp CTTCTTC---HHHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSC
T ss_pred cCCCCCh---hHHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhH
Confidence 4556654 568999999999999999998 88999999999999999999999998 99998876553 45
Q ss_pred hhcCCcEEEEeCC-----CCHHHHHHhhcCCCeEEEEEeC----CCCCccccccHHHHHHHHHh--cCCEEEEecCCCCC
Q 013019 270 LPKMGITATVIDP-----ADMEGLEAALNNNNVSLFFTES----PTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATP 338 (451)
Q Consensus 270 l~~~Gi~v~~vd~-----~D~d~Le~ai~~~~tklV~les----PsNPtG~v~DL~~IaelA~~--~g~~lVVD~tfa~~ 338 (451)
++..|+++.+++. .|+++|+++++++ +++|++++ |+||+|.+.|+++|.++|++ +|+++++|++|+.+
T Consensus 129 l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~-tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~ 207 (409)
T 3jzl_A 129 LKDFHIGYSSVPLLENGDVDFPRIAKKMTPK-TKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEF 207 (409)
T ss_dssp TGGGTCEEEECCCCTTSCCCHHHHHHHCCTT-EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTT
T ss_pred HHHcCCEEEEeCCCCCCCcCHHHHHHhccCC-CeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccc
Confidence 6778999999987 6899999999874 99999999 99999999999999999999 99999999999988
Q ss_pred C-ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHh--hCCCc--cHHHHHHHHHhhHHHHHHHHHH
Q 013019 339 L-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGAL--NPNAAYLIIRGMKTLHLRVQQQ 413 (451)
Q Consensus 339 ~-~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--~G~~l--s~~~a~l~lrgL~tl~~Rl~~~ 413 (451)
+ ..++..+|+|++++|+||+++|+++.+||+++++++++++++..+.. +|... ....++++++++++++.|++++
T Consensus 208 ~~~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~~~~r~~~~ 287 (409)
T 3jzl_A 208 VEYQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQA 287 (409)
T ss_dssp TSSCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred cccCCccccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHHHHHHHHHHHhhHHHHHHHH
Confidence 6 57888899999999999999999888899999999999998875432 22111 1112567889999999999999
Q ss_pred HHHHHHHHHHHHcCCCeEEEecCCCCCCCCCcc
Q 013019 414 NSTALRMAEILEAHPKVLLLFITLLLCFYNGTL 446 (451)
Q Consensus 414 ~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~l 446 (451)
.+|+..++++|++++. .| ||+ ++||++.+
T Consensus 288 ~~~a~~la~~L~~~g~--~v-~p~-~~~~~~~~ 316 (409)
T 3jzl_A 288 IKGARFTAAMLAEFGV--EA-DPV-WDAPRTDL 316 (409)
T ss_dssp HHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS
T ss_pred HHHHHHHHHHHHhCCC--cc-cCC-CCCCCccE
Confidence 9999999999999986 67 899 88888765
No 20
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.98 E-value=4.1e-31 Score=261.92 Aligned_cols=231 Identities=32% Similarity=0.495 Sum_probs=206.1
Q ss_pred HHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhc
Q 013019 214 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALN 293 (451)
Q Consensus 214 ~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~ 293 (451)
+|+++|++++|.++.+++++|++|+..++.+++++||+|+++++.|.++...+...++..|+++.+++..|+++++++++
T Consensus 2 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~ 81 (331)
T 1pff_A 2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLK 81 (331)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCC
T ss_pred hHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhc
Confidence 68999999999999999999999999999999999999999999999987666554567899999999889999999998
Q ss_pred CCCeEEEEEeCCCCCccccccHHHHHHHHHh-cCCEEEEecCCCCCCccccccCCCcEEEECCcccCCccccceeEEEEe
Q 013019 294 NNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG 372 (451)
Q Consensus 294 ~~~tklV~lesPsNPtG~v~DL~~IaelA~~-~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~ 372 (451)
++ +++|++++|+||+|.+.|+++|.++|++ +|+++|+|++|+.+....++++|+|+++.|++|++++++..++|++++
T Consensus 82 ~~-~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~~~~~r~~G~~~~ 160 (331)
T 1pff_A 82 PN-TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYINGHTDVVAGLVCS 160 (331)
T ss_dssp TT-EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTSSSSSCCCEEEEE
T ss_pred CC-CeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChhhcCCcEEEEECccccCCCCCceEEEEEe
Confidence 74 9999999999999999999999999999 999999999998765445667889999999999999988555899999
Q ss_pred CH-HHHHHHHHHhHh-hCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCCCCCCCc
Q 013019 373 SG-KLVTQIRNLHHV-LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFITLLLCFYNGT 445 (451)
Q Consensus 373 ~~-eli~~lr~~~~~-~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~yPgL~~~p~~~ 445 (451)
++ +++++++..... +|...++..++.+.++++++..|+++..+++..+.++|++++.+..+++++|.++|+..
T Consensus 161 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~ 235 (331)
T 1pff_A 161 RADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHE 235 (331)
T ss_dssp CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHH
T ss_pred CcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHH
Confidence 98 898888877666 66778888999888999999999999999999999999999999999999998887543
No 21
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.96 E-value=6.3e-28 Score=251.43 Aligned_cols=235 Identities=18% Similarity=0.199 Sum_probs=195.7
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHHccCCCeEEEcC-CCCcchHHHHH------HhhhcCCcE
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------TVLPKMGIT 276 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv---~sSG~aAi~~al~all~~GD~VIv~~-~~Y~~t~~~l~------~~l~~~Gi~ 276 (451)
|+++.+++|++++++++|.+.+++ ++||++|+..++.+++++||+|++++ +.|+.+...+. ..++..|++
T Consensus 62 y~~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~ 141 (431)
T 3ht4_A 62 YDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIG 141 (431)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCE
T ss_pred CChhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCE
Confidence 456779999999999999988776 88999999999999999999999998 99998776553 345678999
Q ss_pred EEEeCC-----CCHHHHHHhhcCCCeEEEEEeC-CCCC---ccccccHHHHHHHHHh--cCCEEEEecCCCCCC-ccccc
Q 013019 277 ATVIDP-----ADMEGLEAALNNNNVSLFFTES-PTNP---FLRCVDVKLVSDLCHK--KGAIVCIDGTFATPL-NQKAL 344 (451)
Q Consensus 277 v~~vd~-----~D~d~Le~ai~~~~tklV~les-PsNP---tG~v~DL~~IaelA~~--~g~~lVVD~tfa~~~-~~~pl 344 (451)
+.+++. .|+++|++++++ ++++|++++ |+|| +|...|+++|.++|++ +|+++++|++|+.+. ..++.
T Consensus 142 ~~~v~~~~~~~~d~e~l~~~l~~-~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~ 220 (431)
T 3ht4_A 142 YNAVPLTEGGLVDFEAVAAAIHS-NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC 220 (431)
T ss_dssp EEECCBCTTSSBCHHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG
T ss_pred EEEeCCCCCCCcCHHHHHhhcCC-CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc
Confidence 999886 489999999987 499999995 5555 5556689999999999 999999999998875 46788
Q ss_pred cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHh--hCCCccH--HHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 013019 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNP--NAAYLIIRGMKTLHLRVQQQNSTALRM 420 (451)
Q Consensus 345 ~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--~G~~ls~--~~a~l~lrgL~tl~~Rl~~~~~nA~~L 420 (451)
.+|+|+++.|++|+++|+.+..||+++++++++++++..... +|...++ ..++++++++++++.|++++.+++..+
T Consensus 221 ~~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~l 300 (431)
T 3ht4_A 221 HVGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFT 300 (431)
T ss_dssp GTTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHhhhHHHHHHHHHHHHHHH
Confidence 889999999999999997667789999999999998875543 2322222 236778899999999999999999999
Q ss_pred HHHHHcCCCeEEEecCCCCCCCCCcc
Q 013019 421 AEILEAHPKVLLLFITLLLCFYNGTL 446 (451)
Q Consensus 421 ae~L~~~p~V~~V~yPgL~~~p~~~l 446 (451)
+++|++++. .| ||+ +++|.+++
T Consensus 301 ~~~L~~~g~--~v-~p~-~~~~~~~l 322 (431)
T 3ht4_A 301 AAFLEKLGM--NT-SPA-WNAPRTDL 322 (431)
T ss_dssp HHHHHHHTC--CE-ESC-TTSCCSSS
T ss_pred HHHHHhCcC--Ee-cCC-CCCCCccE
Confidence 999999875 45 787 67776654
No 22
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.93 E-value=1.3e-24 Score=218.51 Aligned_cols=220 Identities=12% Similarity=0.162 Sum_probs=173.9
Q ss_pred CchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC--
Q 013019 208 GNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~g---ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-- 282 (451)
..+...+|++.++++++ .++.+++++|++|+..++.+++++||+|+++.+.|.++... +...|.++..++.
T Consensus 61 ~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~ 136 (375)
T 3op7_A 61 WIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDI----PKSLGAEVDLWQIEE 136 (375)
T ss_dssp CTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHH----HHHTTCEEEEEEEEG
T ss_pred CCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHH----HHHcCCEEEEEeccc
Confidence 34556789999999874 36788888888999999999999999999999999987644 3456777766653
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc---c-ccCCCcE
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A-LSLGADL 350 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~---p-l~~GaDi 350 (451)
.|+++|++++++ ++++|++++|+||+|.+.+ +++|.++|++||+++|+|++|+...... . -..+.++
T Consensus 137 ~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i 215 (375)
T 3op7_A 137 ENGWLPDLEKLRQLIRP-TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGI 215 (375)
T ss_dssp GGTTEECHHHHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEE
T ss_pred cCCCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEE
Confidence 289999999987 4999999999999999999 9999999999999999999987632211 0 1235679
Q ss_pred EEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHH----HHHHHHHHHHHHHHHHHc
Q 013019 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL----RVQQQNSTALRMAEILEA 426 (451)
Q Consensus 351 Vv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~----Rl~~~~~nA~~Lae~L~~ 426 (451)
++.|+||.++.+| .++|+++++++++++++..+...+...++..++++...++.... +.++..++++.+.+.|++
T Consensus 216 ~~~s~sK~~~~~G-~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 294 (375)
T 3op7_A 216 AVNSLSKTYSLPG-IRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEE 294 (375)
T ss_dssp EEEESSSSSSCGG-GCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeEChhhcCCcc-cceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999998665 56899999999999998877766666677776666555554332 334447788889999999
Q ss_pred CCCeEEE
Q 013019 427 HPKVLLL 433 (451)
Q Consensus 427 ~p~V~~V 433 (451)
+|++..+
T Consensus 295 ~~~~~~~ 301 (375)
T 3op7_A 295 EPLVSYI 301 (375)
T ss_dssp CTTEEEC
T ss_pred CCCceEe
Confidence 8888654
No 23
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.93 E-value=2.2e-23 Score=210.18 Aligned_cols=212 Identities=12% Similarity=0.124 Sum_probs=172.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~L 288 (451)
.+...+|+++|++++|.++.+++++|++|+..++.+++++||+|+++.+.|+.+... +...|.++..++..|+++|
T Consensus 83 ~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~l 158 (384)
T 1bs0_A 83 SVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEA----ASLSPSQLRRFAHNDVTHL 158 (384)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH----HHTSSSEEEEECTTCHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCcEEEEcccccHHHHHH----HHHcCCCEEEeCCCCHHHH
Confidence 377889999999999998899999999999999999999999999999999976643 3456889888988899999
Q ss_pred HHhhcCC--CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc-------ccccCCCcEEEECCcccC
Q 013019 289 EAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------KALSLGADLVLHSATKFI 359 (451)
Q Consensus 289 e~ai~~~--~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-------~pl~~GaDiVv~S~SK~l 359 (451)
++++++. ++++|++++|+||||.+.++++|.++|+++|+++|+|++|+.+... ..+..+.|+++.|+||++
T Consensus 159 ~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~ 238 (384)
T 1bs0_A 159 ARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGF 238 (384)
T ss_dssp HHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTT
T ss_pred HHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchh
Confidence 9999753 3799999999999999999999999999999999999998765321 112245899999999999
Q ss_pred CccccceeEEEEeCHHHHHHHHHHhHhh--CCCccHHHHHHHHHhhHHH-----HHHHHHHHHHHHHHHHHHHcCC
Q 013019 360 GGHNDVLAGSISGSGKLVTQIRNLHHVL--GGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 360 ~G~gdv~gG~Iv~~~eli~~lr~~~~~~--G~~ls~~~a~l~lrgL~tl-----~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
+.. ||+++++++++++++.....+ +...++..+..+...++.+ ..+.++..++++.+.+.|++++
T Consensus 239 ~~~----GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 310 (384)
T 1bs0_A 239 GVS----GAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP 310 (384)
T ss_dssp SSC----CEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred hcc----CcEEEeCHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 854 599999999998887653222 3346676665555444433 3556777788999999998873
No 24
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.92 E-value=9e-24 Score=209.89 Aligned_cols=216 Identities=19% Similarity=0.215 Sum_probs=167.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----C
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A 283 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----~ 283 (451)
.++...+|+++|++++|.+..+++++|++|+.+++.+++++||+|+++++.|..++... ......|+++..++. .
T Consensus 36 ~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 114 (347)
T 1jg8_A 36 EDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVG-AMAVLSGVMPHPVPGKNGAM 114 (347)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCHHHHSSTT-HHHHHTCCEEEEECEETTEE
T ss_pred CChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHHHhcCCCCEEEEcCcchhhhcccc-chhhccCeEEEEecCCCCcc
Confidence 57888999999999999999999999999999999999999999999999997654311 123445777766621 3
Q ss_pred CHHHHHHhhcC-----CCeEEEEEeCCCCCc-ccccc---HHHHHHHHHhcCCEEEEecCCCC------CCccccccCCC
Q 013019 284 DMEGLEAALNN-----NNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGA 348 (451)
Q Consensus 284 D~d~Le~ai~~-----~~tklV~lesPsNPt-G~v~D---L~~IaelA~~~g~~lVVD~tfa~------~~~~~pl~~Ga 348 (451)
|+++|++++++ .++++|++++|+||| |.+.+ +++|.++|+++|+++|+|+++.. +....++..++
T Consensus 115 d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~ 194 (347)
T 1jg8_A 115 DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYA 194 (347)
T ss_dssp CHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTC
T ss_pred CHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccc
Confidence 89999999975 159999999999999 99875 57889999999999999998531 22222333468
Q ss_pred cEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCc--cHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHc
Q 013019 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEA 426 (451)
Q Consensus 349 DiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~l--s~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~ 426 (451)
|.++.|+||+++++ .||+++++++++++++..+..+|... ....+++...+++....++++..++++.+.+.|++
T Consensus 195 d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~ 271 (347)
T 1jg8_A 195 DSVMFCLSKGLCAP---VGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKE 271 (347)
T ss_dssp SEEEEESSSTTCCS---SCEEEEECHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHHH
T ss_pred cEEEEecccccCCC---ceEEEEcCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98899999999875 46678889999998887776666443 44555555566665544566666788888999987
Q ss_pred C
Q 013019 427 H 427 (451)
Q Consensus 427 ~ 427 (451)
+
T Consensus 272 ~ 272 (347)
T 1jg8_A 272 I 272 (347)
T ss_dssp H
T ss_pred c
Confidence 6
No 25
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.92 E-value=6.3e-24 Score=215.49 Aligned_cols=227 Identities=15% Similarity=0.167 Sum_probs=174.4
Q ss_pred ccccCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHH----ccCCCeEEEcCCCCcchHHHHHHhhhcCC
Q 013019 202 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~al----l~~GD~VIv~~~~Y~~t~~~l~~~l~~~G 274 (451)
+.|++...+...+++++|++++|. ++.+++++|++|+..++.++ +++||+|+++++.|.++...+...+...|
T Consensus 64 ~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g 143 (420)
T 1t3i_A 64 HQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTG 143 (420)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcC
Confidence 334432346678899999999998 67888888999999999999 89999999999999997544444555678
Q ss_pred cEEEEeCC-----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc-ccccCCC
Q 013019 275 ITATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGA 348 (451)
Q Consensus 275 i~v~~vd~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-~pl~~Ga 348 (451)
+++..++. .|+++|+++++++ +++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+... ....+|.
T Consensus 144 ~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~ 222 (420)
T 1t3i_A 144 AVLKFVQLDEQESFDLEHFKTLLSEK-TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDC 222 (420)
T ss_dssp CEEEEECBCTTSSBCHHHHHHHCCTT-EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTC
T ss_pred cEEEEeccCCCCCcCHHHHHHhhCCC-ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCC
Confidence 88888764 4799999999874 999999999999999999999999999999999999998765332 3334589
Q ss_pred cEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHh--------------------hCCCccHHHHHHHHH-hhHH--
Q 013019 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------------------LGGALNPNAAYLIIR-GMKT-- 405 (451)
Q Consensus 349 DiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--------------------~G~~ls~~~a~l~lr-gL~t-- 405 (451)
|+++.|+||.+++++ +|+++++++++++++..... +....++..+++++. .++.
T Consensus 223 di~~~s~sK~~~~~g---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 299 (420)
T 1t3i_A 223 DWLVASGHKMCAPTG---IGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLT 299 (420)
T ss_dssp SEEEEEGGGTTSCTT---CEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEehhhhcCCCc---eEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHH
Confidence 999999999887765 79999999888877643321 111223333333222 3333
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 013019 406 ---LHLRVQQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 406 ---l~~Rl~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
+....++..++++.+.+.|++.|+++.
T Consensus 300 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 329 (420)
T 1t3i_A 300 DLGMENIHNYEVELTHYLWQGLGQIPQLRL 329 (420)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 344567777889999999999888754
No 26
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.92 E-value=4.1e-23 Score=208.36 Aligned_cols=213 Identities=17% Similarity=0.168 Sum_probs=172.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHH
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~ 287 (451)
..+...+|++++++++|.++.+++++|++|+..++.+++++||+|+++.+.|+.+.. .+...|.++..++..|+++
T Consensus 86 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~ 161 (399)
T 3tqx_A 86 TQTIHKELEKDISEFLGTDDTILYSSCFDANGGLFETLLGPEDAIISDELNHASIID----GIRLCKAQRYRYKNNAMGD 161 (399)
T ss_dssp CBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHH----HHHSCCSEEEEECTTCTTH
T ss_pred CchHHHHHHHHHHHHHCCCcEEEECchHHHHHHHHHHhcCCCCEEEECCcccHHHHH----HHHHcCCceeEeCCCCHHH
Confidence 356789999999999999999999999999999999999999999999999998664 3456788888888888899
Q ss_pred HHHhhcCC-----CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc-------ccc--CCCcEEEE
Q 013019 288 LEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-------ALS--LGADLVLH 353 (451)
Q Consensus 288 Le~ai~~~-----~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~-------pl~--~GaDiVv~ 353 (451)
|++++++. ++++|++++|+||||.+.++++|.++|+++|+++|+|++|+.++... ... .+.|+++.
T Consensus 162 l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~ 241 (399)
T 3tqx_A 162 LEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTG 241 (399)
T ss_dssp HHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEE
T ss_pred HHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEe
Confidence 99888751 48999999999999999999999999999999999999986443211 111 25799999
Q ss_pred CCcccCCccccceeEEEEeCHHHHHHHHHHhHh--hCCCccHHHHHHHHHhhHHH----HHHHHHHHHHHHHHHHHHHcC
Q 013019 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL----HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 354 S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--~G~~ls~~~a~l~lrgL~tl----~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
|+||+++|. .||++++++++++.++..... +....++..+..+...++.+ ....++..++.+.+.+.|+++
T Consensus 242 s~sK~~~g~---~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (399)
T 3tqx_A 242 TLGKALGGA---SGGYTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL 318 (399)
T ss_dssp ESSSSSCSS---CCEEEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHhcccC---ceEEEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 999999954 479999999999988875432 34456676655555555544 455667778888888888875
No 27
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.92 E-value=2.6e-23 Score=210.87 Aligned_cols=212 Identities=19% Similarity=0.195 Sum_probs=174.5
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~L 288 (451)
.+...+|+++|++++|.++.+++++|++|+..++.+++++||+|+++.+.|+.+.. .+...|+++..++..|+++|
T Consensus 89 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~l 164 (401)
T 1fc4_A 89 QDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIID----GVRLCKAKRYRYANNDMQEL 164 (401)
T ss_dssp BHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHH----HHHTSCSEEEEECTTCHHHH
T ss_pred cHHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHHHHcCCCCEEEEcchhHHHHHH----HHHHcCCceEEECCCCHHHH
Confidence 67789999999999998889999999999999999999999999999999987654 34567899888888899999
Q ss_pred HHhhcCC-----CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc---c------cccCCCcEEEEC
Q 013019 289 EAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---K------ALSLGADLVLHS 354 (451)
Q Consensus 289 e~ai~~~-----~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~---~------pl~~GaDiVv~S 354 (451)
++++++. ++++|++++|+||||.+.++++|.++|+++|+++|+|++|+.++.. . .+..+.|+++.|
T Consensus 165 ~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s 244 (401)
T 1fc4_A 165 EARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGT 244 (401)
T ss_dssp HHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEE
T ss_pred HHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEec
Confidence 9988641 4899999999999999999999999999999999999999643321 1 122357999999
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHHhH--hhCCCccHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--~~G~~ls~~~a~l~lrgL~tl---~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+||++++.. ||+++++++++++++.... .++..+++..++.+...++.+ ....++..++++.+.+.|+++
T Consensus 245 ~sK~~~~~~---gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (401)
T 1fc4_A 245 LGKALGGAS---GGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA 319 (401)
T ss_dssp SSSTTCSSS---CEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhccCCC---CEEEEcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 999995543 5999999999998887542 235567787777777777665 355677788899999999886
No 28
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.92 E-value=4.6e-23 Score=206.31 Aligned_cols=221 Identities=12% Similarity=0.146 Sum_probs=173.4
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
+.+|+++...+|++++++++|. ++.+++++|++|+..++.+++++||+|+++++.|.+.... +...|.++..++
T Consensus 61 ~~~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~ 136 (363)
T 3ffh_A 61 TEIYPDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQN----ALIEGAEVREIP 136 (363)
T ss_dssp CCBC----CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHH----HHHHTCEEEEEE
T ss_pred hhcCCCcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHH----HHHcCCEEEEec
Confidence 4556777788999999999985 5677888888999999999999999999999999886543 445688888776
Q ss_pred CC-----CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc--CCEEEEecCCCCCCc-------cccccCC
Q 013019 282 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN-------QKALSLG 347 (451)
Q Consensus 282 ~~-----D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~--g~~lVVD~tfa~~~~-------~~pl~~G 347 (451)
.. |+++|+++++++ +++|++++|+||||.+.++++|.++++.+ |+++|+|++|+.... ......+
T Consensus 137 ~~~~~~~d~~~l~~~i~~~-~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 215 (363)
T 3ffh_A 137 LLQDGEHDLEGMLNAIDEK-TTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYK 215 (363)
T ss_dssp CCTTSCCCHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCT
T ss_pred CCCCCCcCHHHHHHhcccC-CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCC
Confidence 54 899999999874 99999999999999999999999999887 999999999873221 1111234
Q ss_pred CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHH
Q 013019 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 348 aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~Lae~L 424 (451)
.++++.|+||.++.+| .++|+++++++++++++.....+ ..++..++.+...+ +.+..+.++..++.+.+.+.|
T Consensus 216 ~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l 292 (363)
T 3ffh_A 216 NLIITRTFSKIYGLAS-ARVGYGIADKEIIRQLNIVRPPF--NTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFA 292 (363)
T ss_dssp TEEEEEESSSTTCCSS-CCCEEEEECHHHHHHHHHTCCSC--CCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeechhhhcCch-hceeeeecCHHHHHHHHHhCCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688999999998666 56799999999999988766533 45666666555554 556667778888899999999
Q ss_pred HcCCCeEE
Q 013019 425 EAHPKVLL 432 (451)
Q Consensus 425 ~~~p~V~~ 432 (451)
++++++..
T Consensus 293 ~~~~g~~~ 300 (363)
T 3ffh_A 293 KRFEKVKL 300 (363)
T ss_dssp HHCTTCEE
T ss_pred hhCCCceE
Confidence 99777753
No 29
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.92 E-value=6.7e-23 Score=206.29 Aligned_cols=227 Identities=18% Similarity=0.177 Sum_probs=171.7
Q ss_pred CccccCCCchhHHHHHHHHHhhhC----CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE
Q 013019 201 SFEYGRYGNPTTVVVEEKMSALEG----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (451)
Q Consensus 201 ~~~Y~R~~npt~~~Lee~LA~l~g----ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~ 276 (451)
.+.|+....+.++++.+.+++.+| .++.+++++|++|+..++.+++++||+|+++.+.|.++... +...|.+
T Consensus 57 ~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~ 132 (391)
T 3dzz_A 57 AFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSV----IEGNGRR 132 (391)
T ss_dssp CCCCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHHH----HHHTTCE
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHHH----HHHcCCE
Confidence 456666555667778888888777 35677777778999999999999999999999999986643 4456888
Q ss_pred EEEeCC--------CCHHHHHHhhcCCCeEEEEEeCCCCCcccc---ccHHHHHHHHHhcCCEEEEecCCCCCCc-----
Q 013019 277 ATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLN----- 340 (451)
Q Consensus 277 v~~vd~--------~D~d~Le~ai~~~~tklV~lesPsNPtG~v---~DL~~IaelA~~~g~~lVVD~tfa~~~~----- 340 (451)
+..++. .|+++|++++++.++++|++++|+||||.+ .++++|.++|+++|+++|+|++|+....
T Consensus 133 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~ 212 (391)
T 3dzz_A 133 VISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDI 212 (391)
T ss_dssp EEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCC
T ss_pred EEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCc
Confidence 777764 689999999984459999999999999999 6789999999999999999999874321
Q ss_pred cccccCC---Cc--EEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhC-CCccHHHHHHHHHhhH----HHHHH
Q 013019 341 QKALSLG---AD--LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-GALNPNAAYLIIRGMK----TLHLR 409 (451)
Q Consensus 341 ~~pl~~G---aD--iVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G-~~ls~~~a~l~lrgL~----tl~~R 409 (451)
.....++ .| +++.|+||.++.+| .++|+++++ ++++++++......+ ...++..++.+...++ .+..+
T Consensus 213 ~~~~~~~~~~~d~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 291 (391)
T 3dzz_A 213 TPAFTVDWDAKNWVVSLISPSKTFNLAA-LHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLREL 291 (391)
T ss_dssp CCGGGSCTTTGGGEEEEECSHHHHTCTT-TCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHH
T ss_pred eehhhcCccccCcEEEEEeChhhccccc-hhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHH
Confidence 1112222 45 99999999997555 468898886 889888887654333 2344444443333333 35666
Q ss_pred HHHHHHHHHHHHHHHHc-CCCeEE
Q 013019 410 VQQQNSTALRMAEILEA-HPKVLL 432 (451)
Q Consensus 410 l~~~~~nA~~Lae~L~~-~p~V~~ 432 (451)
.++..++++.+.+.|++ .|++..
T Consensus 292 ~~~~~~~~~~l~~~l~~~~~~~~~ 315 (391)
T 3dzz_A 292 KQVLRDNFAYAREFLAKEVPEVKV 315 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHHHHHHHHhhCCCcEE
Confidence 77788889999999998 787753
No 30
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.92 E-value=4.9e-24 Score=216.83 Aligned_cols=205 Identities=23% Similarity=0.213 Sum_probs=168.9
Q ss_pred HHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHH
Q 013019 212 TVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (451)
Q Consensus 212 ~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~L 288 (451)
.+.+++.+++++|. ++.+++++|++|+..++.++ +||+|+++++.|++++..+. .+...|+++.++ .|+++|
T Consensus 60 ~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~-~~~~~g~~~~~v--~d~~~l 134 (374)
T 2aeu_A 60 AEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPSIER-SCKIVNAKYFES--DKVGEI 134 (374)
T ss_dssp HHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHH-HHHHTTCEEEEE--SCHHHH
T ss_pred HHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHH-HHHHcCcEEEEe--CCHHHH
Confidence 34677777788898 77888999999999999987 99999999999988776554 556779988888 689999
Q ss_pred HHhhcCCCeEE-EEEeCCCCCcc-ccccHHHHHHHHHhcCCEEEEecCCCCCC----ccc-cccCCCcEEEECCcccCCc
Q 013019 289 EAALNNNNVSL-FFTESPTNPFL-RCVDVKLVSDLCHKKGAIVCIDGTFATPL----NQK-ALSLGADLVLHSATKFIGG 361 (451)
Q Consensus 289 e~ai~~~~tkl-V~lesPsNPtG-~v~DL~~IaelA~~~g~~lVVD~tfa~~~----~~~-pl~~GaDiVv~S~SK~l~G 361 (451)
+++ ++ ++++ |++++|+||+| ...++++|.++|+++|+++|+|++++... ... ++.++.|+++.|+||+++|
T Consensus 135 ~~~-~~-~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g 212 (374)
T 2aeu_A 135 LNK-ID-KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEG 212 (374)
T ss_dssp HTT-CC-TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSS
T ss_pred Hhc-CC-CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccC
Confidence 988 65 5999 99999999999 88899999999999999999999986543 111 4566889999999999987
Q ss_pred cccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHH-HHHHHHHHHHHH----HHHHHc
Q 013019 362 HNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL-RVQQQNSTALRM----AEILEA 426 (451)
Q Consensus 362 ~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~-Rl~~~~~nA~~L----ae~L~~ 426 (451)
. ++|+++++++++++++..+..++..+++..++.+..+++.+.. +++++.++++.+ .+.|.+
T Consensus 213 ~---~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 279 (374)
T 2aeu_A 213 P---RGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNK 279 (374)
T ss_dssp C---SCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred c---ceEEEEECHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 4899999999999998887777777888888888888877654 677777777666 455543
No 31
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.91 E-value=1.2e-23 Score=214.73 Aligned_cols=210 Identities=16% Similarity=0.158 Sum_probs=174.9
Q ss_pred chhHHHHHHHH-HhhhC-CCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC--
Q 013019 209 NPTTVVVEEKM-SALEG-AESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (451)
Q Consensus 209 npt~~~Lee~L-A~l~g-ae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~-- 283 (451)
+|...+||+++ ++++| .+++++++||++|+..++.++ +++||+||++.+.|.++... +...|.++.+++..
T Consensus 35 ~~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~----~~~~G~~~~~v~~~~~ 110 (377)
T 3ju7_A 35 GPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLA----AIWCGLEPYFIDISID 110 (377)
T ss_dssp CHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHH----HHHTTCEEEEECBCTT
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHH----HHHcCCEEEEEecCCc
Confidence 58899999999 99999 889999999999999999998 89999999999999987643 34568888888642
Q ss_pred ----CHHHHHHhh-cCCC--eEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc--ccc-cCCCcEEEE
Q 013019 284 ----DMEGLEAAL-NNNN--VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KAL-SLGADLVLH 353 (451)
Q Consensus 284 ----D~d~Le~ai-~~~~--tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~--~pl-~~GaDiVv~ 353 (451)
|+++|++++ ++ + |++|+ |+||+|.+.|+++|.++|+ +|++||+|++++.+... +++ ....|+.++
T Consensus 111 ~~~~d~~~l~~~i~~~-~~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~ 185 (377)
T 3ju7_A 111 DWYMDKTVLWDKIEEL-KEEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIY 185 (377)
T ss_dssp TCSBCHHHHHHHHHHH-GGGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEE
T ss_pred cCCcCHHHHHHHHhcC-CCCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEE
Confidence 899999988 43 4 88887 7889999999999999999 99999999998765332 232 223788888
Q ss_pred CC--cccCCccccceeEEEEe-CHHHHHHHHHHhHh------------hCCCccHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 013019 354 SA--TKFIGGHNDVLAGSISG-SGKLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTAL 418 (451)
Q Consensus 354 S~--SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~------------~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~ 418 (451)
|+ +|++++ + .||++++ ++++.++++.++.. ++..++++.+++.+.+++++..+++++.++++
T Consensus 186 S~~~~K~l~~-g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~ 262 (377)
T 3ju7_A 186 SFHATKPFGI-G--EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWDDKLKERTRISE 262 (377)
T ss_dssp ECBTTSSSCC-B--SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ECCCCCcCCC-C--CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 85 699997 4 4787776 56788888876542 23457899999999999999999999999999
Q ss_pred HHHHHHHcCCCe
Q 013019 419 RMAEILEAHPKV 430 (451)
Q Consensus 419 ~Lae~L~~~p~V 430 (451)
.+.+.|++++.+
T Consensus 263 ~~~~~L~~~~~~ 274 (377)
T 3ju7_A 263 WYKQLLQSNGLM 274 (377)
T ss_dssp HHHHHHHHTTTT
T ss_pred HHHHHhcCCCCc
Confidence 999999998754
No 32
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.91 E-value=1.7e-23 Score=209.81 Aligned_cols=220 Identities=15% Similarity=0.238 Sum_probs=171.6
Q ss_pred ccCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
+.+|+++...+|+++|++++|. ++.+++++|++|+..++.+++++||+|+++.+.|.+.... +...|.++..+
T Consensus 61 ~~~y~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v 136 (367)
T 3euc_A 61 LNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMS----AQFAGLEFVGV 136 (367)
T ss_dssp TTCSCCCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHH----HHTTTCEEEEE
T ss_pred hhcCCCCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHH----HHHcCCeEEEe
Confidence 4456667788999999999997 4556666667999999999999999999999999987643 44568888777
Q ss_pred C-----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccc---cHHHHHHHHHhc--CCEEEEecCCCCCCccc----cccC
Q 013019 281 D-----PADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKK--GAIVCIDGTFATPLNQK----ALSL 346 (451)
Q Consensus 281 d-----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~---DL~~IaelA~~~--g~~lVVD~tfa~~~~~~----pl~~ 346 (451)
+ ..|+++|++++++.++++|++++|+||||.+. ++++|+++|++| |+++|+|++|+...... ....
T Consensus 137 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 216 (367)
T 3euc_A 137 PLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDF 216 (367)
T ss_dssp ECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTC
T ss_pred cCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhC
Confidence 5 34899999999863489999999999999996 577888889999 99999999987532211 1123
Q ss_pred CCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHH
Q 013019 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAEI 423 (451)
Q Consensus 347 GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~Lae~ 423 (451)
+.++++.|+||+ +++| .++|+++++++++++++.....+ ..++..++.+...+ +.+..+.++..++++.+.+.
T Consensus 217 ~~~i~~~s~sK~-~~~G-~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 292 (367)
T 3euc_A 217 GNLLVMRTVSKL-GLAG-IRLGYVAGDPQWLEQLDKVRPPY--NVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEG 292 (367)
T ss_dssp TTEEEEEECCCT-TSCS-CCEEEEEECHHHHHHHGGGCCSS--CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecchhh-cccc-cCceeeeeCHHHHHHHHHhCCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 567999999999 6554 67899999999988887665443 35566555544444 34566777888899999999
Q ss_pred HHcCCCeE
Q 013019 424 LEAHPKVL 431 (451)
Q Consensus 424 L~~~p~V~ 431 (451)
|+++|++.
T Consensus 293 l~~~~g~~ 300 (367)
T 3euc_A 293 MAAHGGVT 300 (367)
T ss_dssp HHTSTTCE
T ss_pred HHhCCCcE
Confidence 99998886
No 33
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.91 E-value=2.6e-23 Score=208.20 Aligned_cols=219 Identities=13% Similarity=0.198 Sum_probs=173.1
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
+.+|+++...+|+++|++++|. ++.+++++|++|+..++.+++++||+|+++.+.|.+.... +...|.++..++
T Consensus 59 ~~~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~ 134 (365)
T 3get_A 59 AHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIY----AKQCGAKCYKTQ 134 (365)
T ss_dssp TTSCCCTTCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHH----HHHHTCEEEECS
T ss_pred hccCCCCChHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHH----HHHcCCEEEEEe
Confidence 4455666567999999999994 5778888888999999999999999999999999876543 445688888887
Q ss_pred C-----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHH--hcCCEEEEecCCCCCC---c----cccc---
Q 013019 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH--KKGAIVCIDGTFATPL---N----QKAL--- 344 (451)
Q Consensus 282 ~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~--~~g~~lVVD~tfa~~~---~----~~pl--- 344 (451)
. .|+++|++++++ ++++|++++|+||||.+.++++|.++++ ++|+++|+|++|+... . ...+
T Consensus 135 ~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 213 (365)
T 3get_A 135 SITHNLDEFKKLYETHKD-EIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELI 213 (365)
T ss_dssp SSSCCHHHHHHHHHHTTT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHH
T ss_pred cCCCCCCCHHHHHHHhCC-CCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHh
Confidence 6 468899999986 4999999999999999999999888888 6799999999987322 1 1111
Q ss_pred -cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHHHHHHH
Q 013019 345 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRM 420 (451)
Q Consensus 345 -~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~L 420 (451)
..+.++++.|+||.++.+| .++|+++++++++++++.....++ .++..++.+...+ +.+..+.++..++++.+
T Consensus 214 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 290 (365)
T 3get_A 214 KEFDNVLYLGTFSKLYGLGG-LRIGYGIANANIISAFYKLRAPFN--VSNLALKAAVAAMDDDEFTEKTLENNFSQMELY 290 (365)
T ss_dssp HHCTTEEEEEESSSTTSCTT-TCCEEEEECHHHHHHHHHHSCTTC--SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeecchHhcCcc-hheEEEEcCHHHHHHHHHhcCCCC--cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 2366799999999997665 568999999999999888766554 5555555444443 44666777888889999
Q ss_pred HHHHHcCCCeE
Q 013019 421 AEILEAHPKVL 431 (451)
Q Consensus 421 ae~L~~~p~V~ 431 (451)
.+.|+++ ++.
T Consensus 291 ~~~l~~~-g~~ 300 (365)
T 3get_A 291 KEFAKKH-NIK 300 (365)
T ss_dssp HHHHHHT-TCE
T ss_pred HHHHHhC-CCE
Confidence 9999987 554
No 34
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.91 E-value=6.8e-24 Score=212.06 Aligned_cols=221 Identities=13% Similarity=0.206 Sum_probs=167.5
Q ss_pred cccCCCchhHHHHHHH-HHhhhCCCcEEEeC-CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 203 EYGRYGNPTTVVVEEK-MSALEGAESTVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 203 ~Y~R~~npt~~~Lee~-LA~l~gae~~vv~s-SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
.++++..+...+|+++ +++++|.+ .++++ +|++|+..++.+++++||+|+++++.|.++... +...|+++..+
T Consensus 46 ~~~~~~~~~~~~l~~~~la~~~~~~-~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v 120 (371)
T 2e7j_A 46 RLDEIKTPPIHDFIHNQLPKFLGCD-VARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVA----AERAGLNIALV 120 (371)
T ss_dssp -------CCHHHHHHTHHHHHTTSS-EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH----HHHTTCEEEEE
T ss_pred cchhhHHHHHHHHHHHHHHHHcCCC-EEEEeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHH----HHHcCCeEEEe
Confidence 3445567888999999 99999988 55555 557999999999999999999999999987644 45678888888
Q ss_pred C--CC-----CHHHHHHhhc-----CCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCC
Q 013019 281 D--PA-----DMEGLEAALN-----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLG 347 (451)
Q Consensus 281 d--~~-----D~d~Le~ai~-----~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~G 347 (451)
+ .. |+++|+++++ + ++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+.. .....++
T Consensus 121 ~~~~~~~~~~d~~~l~~~l~~~~~~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~ 199 (371)
T 2e7j_A 121 PKTDYPDYAITPENFAQTIEETKKRG-EVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIG 199 (371)
T ss_dssp CCCCTTTCCCCHHHHHHHHHHHTTTS-CEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHT
T ss_pred ecccCCCCCcCHHHHHHHHHhhcccC-CeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcC
Confidence 7 44 7999999997 5 499999999999999999999999999999999999999876543 2333457
Q ss_pred CcEEEECCcccCCccccceeEEEEeCHHHHHH-HHHHhH--hh-----CCCccHHHHHHHHHhhHHHH-HHHHHH--HHH
Q 013019 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ-IRNLHH--VL-----GGALNPNAAYLIIRGMKTLH-LRVQQQ--NST 416 (451)
Q Consensus 348 aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~-lr~~~~--~~-----G~~ls~~~a~l~lrgL~tl~-~Rl~~~--~~n 416 (451)
.|+++.|++|+++++. ++|+++++++++++ ++.... .. ....++...+.+...++.+. ...++. .++
T Consensus 200 ~di~~~s~sK~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 277 (371)
T 2e7j_A 200 ADFIVGSGHKSMAASG--PIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEK 277 (371)
T ss_dssp CSEEEEEHHHHSSCCS--SCEEEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHH
T ss_pred CCEEEecCCcCCCCCC--CcEEEEEechhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999988764 57999999888776 654332 11 23344444444444555444 334555 688
Q ss_pred HHHHHHHHHcCCCeEE
Q 013019 417 ALRMAEILEAHPKVLL 432 (451)
Q Consensus 417 A~~Lae~L~~~p~V~~ 432 (451)
++.+.+.|+++ ++..
T Consensus 278 ~~~l~~~L~~~-~~~~ 292 (371)
T 2e7j_A 278 ARRFAAEMEKL-GIKQ 292 (371)
T ss_dssp HHHHHHHHHHT-TCEE
T ss_pred HHHHHHHHHHc-CcEE
Confidence 88999999887 6643
No 35
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.91 E-value=3.5e-23 Score=209.72 Aligned_cols=219 Identities=15% Similarity=0.192 Sum_probs=173.3
Q ss_pred CchhHHHHHHHHHhhhCC-----CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 208 GNPTTVVVEEKMSALEGA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~ga-----e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
..+.++++++++++++|. ++.+++++|++|+..++.+++++||+|+++.+.|.+.... +...|.++..++.
T Consensus 80 ~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~~ 155 (407)
T 3nra_A 80 DLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKL----VEFFEGEMVPVQL 155 (407)
T ss_dssp CHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCCTTCEEEEEESCCTHHHHH----HHHTTCEEEEEEB
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEcCCcccchHHH----HHHcCCEEEEeec
Confidence 345678889999998886 5677777778999999999999999999999999986643 4456777766653
Q ss_pred -----------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc-------c
Q 013019 283 -----------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-------Q 341 (451)
Q Consensus 283 -----------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~-------~ 341 (451)
.|+++|++++++ ++++|++++|+||||.+.+ +++|+++|++||+++|+|++|+.... .
T Consensus 156 ~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~ 234 (407)
T 3nra_A 156 DYVSADETRAGLDLTGLEEAFKA-GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHL 234 (407)
T ss_dssp CCCSSCCSSCCBCHHHHHHHHHT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCG
T ss_pred ccccccCcCCCcCHHHHHHHHhh-CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCh
Confidence 389999999987 4899999999999999998 89999999999999999999875321 1
Q ss_pred ccc---cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh----HHHHHHHHHHH
Q 013019 342 KAL---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQN 414 (451)
Q Consensus 342 ~pl---~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL----~tl~~Rl~~~~ 414 (451)
..+ ..+.++++.|+||.++.+| .++|++++++++++.++.....+....++..++.+...+ +.+..++++..
T Consensus 235 ~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 313 (407)
T 3nra_A 235 RAEAAVDAENVVTIMGPSKTESLSG-YRLGVAFGSRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQ 313 (407)
T ss_dssp GGCTTSCGGGEEEEECSSSTTCCGG-GCCEEEEECHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHH
T ss_pred hhcCcccCCcEEEEeCcccccCCCe-eeEEEEEcCHHHHHHHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHH
Confidence 111 1345699999999998665 568999999999999988777776666676665554444 34666777888
Q ss_pred HHHHHHHHHHHcCCCeEE
Q 013019 415 STALRMAEILEAHPKVLL 432 (451)
Q Consensus 415 ~nA~~Lae~L~~~p~V~~ 432 (451)
++++.+.+.|+++|++..
T Consensus 314 ~~~~~l~~~L~~~~~~~~ 331 (407)
T 3nra_A 314 AIRDELLHVLRGCEGVFA 331 (407)
T ss_dssp HHHHHHHHHHHTSTTCBC
T ss_pred HHHHHHHHHHhcCCCcee
Confidence 889999999998877643
No 36
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.91 E-value=4.3e-23 Score=210.43 Aligned_cols=221 Identities=18% Similarity=0.246 Sum_probs=168.9
Q ss_pred CchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHcc----CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 208 GNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVP----AGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all~----~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
..+...+++++|++++|.+ +.+++++|++|+.+++.++++ +||+|+++.+.|.++...+.. +...|+++..++
T Consensus 66 ~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~~~~g~~~~~v~ 144 (423)
T 3lvm_A 66 AEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQ-LEREGFEVTYLA 144 (423)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHH-HHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHH-HHHcCCEEEEec
Confidence 3456688999999999975 788888899999999998874 799999999999987665533 356688888887
Q ss_pred CC-----CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECC
Q 013019 282 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSA 355 (451)
Q Consensus 282 ~~-----D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~ 355 (451)
.. |+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|++||+|++++.+.. ......++|+++.|+
T Consensus 145 ~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~ 223 (423)
T 3lvm_A 145 PQRNGIIDLKELEAAMRDD-TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSG 223 (423)
T ss_dssp CCTTSCCCHHHHHHHCCTT-EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEES
T ss_pred cCCCCccCHHHHHHhcCCC-cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEech
Confidence 54 899999999874 99999999999999999999999999999999999999876543 333456889999999
Q ss_pred cccCCccccceeEEEEeCHHHHHHHHHHhH-------hhCCCccHHHHHHHHHhhHH----HHHHHHHHHHHHHHHHHHH
Q 013019 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 356 SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~-------~~G~~ls~~~a~l~lrgL~t----l~~Rl~~~~~nA~~Lae~L 424 (451)
||.+++.+ +|+++++++++++++.... ......+......+...++. +....++..++++.+.+.|
T Consensus 224 sK~~g~~g---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L 300 (423)
T 3lvm_A 224 HKIYGPKG---IGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGI 300 (423)
T ss_dssp TTTTSCSS---CEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCC---eEEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887765 6888888766555443221 11123334333332223322 3455677778888999999
Q ss_pred HcCCCeEEE
Q 013019 425 EAHPKVLLL 433 (451)
Q Consensus 425 ~~~p~V~~V 433 (451)
++.|++..+
T Consensus 301 ~~~~~~~~~ 309 (423)
T 3lvm_A 301 KDIEEVYLN 309 (423)
T ss_dssp TTSTTEEEE
T ss_pred hcCCCEEEe
Confidence 888887554
No 37
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.91 E-value=4.7e-23 Score=205.23 Aligned_cols=217 Identities=14% Similarity=0.182 Sum_probs=172.0
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
+.+|+++...+|+++|++++|. ++.+++++|++|+..++.+++++||+|+++.+.|.+... .+...|.++..++
T Consensus 45 ~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~~~ 120 (354)
T 3ly1_A 45 ANRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEH----FAKIAGMKVTKVK 120 (354)
T ss_dssp TTSCCHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSSCTHHHH----HHHHTTCEEEEEC
T ss_pred CcCCCCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHhCCCCeEEECCCCchHHHH----HHHHcCCEEEEec
Confidence 4556788889999999999995 567777777899999999999999999999999998664 3456788888887
Q ss_pred CC-----CHHHHHHhhcC-CCeEEEEEeCCCCCccccccHHHHHHHHHh--cCCEEEEecCCCCCCcc----ccc----c
Q 013019 282 PA-----DMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL----S 345 (451)
Q Consensus 282 ~~-----D~d~Le~ai~~-~~tklV~lesPsNPtG~v~DL~~IaelA~~--~g~~lVVD~tfa~~~~~----~pl----~ 345 (451)
.. |+++|++++++ .++++|++++|+||||.+.++++|.++++. +|+++|+|++|+..... ..+ .
T Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 200 (354)
T 3ly1_A 121 MLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQ 200 (354)
T ss_dssp CCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHT
T ss_pred CCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhh
Confidence 65 89999999983 259999999999999999998888888887 99999999998743221 111 1
Q ss_pred C-CCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHHHHHHHH
Q 013019 346 L-GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMA 421 (451)
Q Consensus 346 ~-GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~La 421 (451)
. +.++++.|+||.++.+| .++|+++++++++++++.....+ ..++..++.+...+ +.+..+.++..++++.+.
T Consensus 201 ~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~ 277 (354)
T 3ly1_A 201 GAENIILLKTFSKIHAMAG-MRVGYAVAHPTVIALMGRYVAGE--KINFSGVDAALASMNDSAFITYSKKSNDVSRQILL 277 (354)
T ss_dssp TCSSEEEEEESSSTTCCGG-GCCEEEECCHHHHHHHGGGTTCS--CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeeChhhccChh-hhheeeecCHHHHHHHHHhcCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 2 56799999999997555 56899999999999888766553 45666555554444 346666777888889999
Q ss_pred HHHHcC
Q 013019 422 EILEAH 427 (451)
Q Consensus 422 e~L~~~ 427 (451)
+.|+++
T Consensus 278 ~~l~~~ 283 (354)
T 3ly1_A 278 KALEDL 283 (354)
T ss_dssp HHHHHH
T ss_pred HHHHHC
Confidence 999876
No 38
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.91 E-value=9.1e-23 Score=204.95 Aligned_cols=209 Identities=15% Similarity=0.265 Sum_probs=167.5
Q ss_pred hHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 211 TTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 211 t~~~Lee~LA~l~g--------ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
...+|+++++++++ .++.+++++|++|+..++.+++++||+|+++++.|.+.... +...|.++..++
T Consensus 67 ~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~- 141 (370)
T 2z61_A 67 GILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNF----IRFLGAKPVFCD- 141 (370)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHH----HHHTTCEEEEEC-
T ss_pred CCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHH----HHHcCCEEEEeC-
Confidence 35678888888763 25678888888999999999999999999999999986643 455688888888
Q ss_pred CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc----ccccc----CCCcEEEEC
Q 013019 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN----QKALS----LGADLVLHS 354 (451)
Q Consensus 283 ~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~----~~pl~----~GaDiVv~S 354 (451)
.|+++|++++++ ++++|++++|+||||.+.+++ |.++|+++|+++|+|++|+.... ..... .+.|+++.|
T Consensus 142 ~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s 219 (370)
T 2z61_A 142 FTVESLEEALSD-KTKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILING 219 (370)
T ss_dssp SSHHHHHHHCCS-SEEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEE
T ss_pred CCHHHHHHhccc-CceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEec
Confidence 789999999987 499999999999999999999 99999999999999999875432 11122 367899999
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH-----HHHHHHHHHHHHHHHHHHHHcC
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t-----l~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+||+++.+| .++|+++++++++++++..........++...+.+...|+. +....++..++.+.+.+.|+++
T Consensus 220 ~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 296 (370)
T 2z61_A 220 FSKLYAMTG-WRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF 296 (370)
T ss_dssp STTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ChhccCCcc-ceEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999997665 57899999999999998877666556677776665555543 3444566677888888899876
No 39
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.91 E-value=1.3e-22 Score=204.02 Aligned_cols=218 Identities=16% Similarity=0.217 Sum_probs=165.2
Q ss_pred cCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 205 GRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
.+|+++...+|+++|++++|.+ +.+++++|++++..++.+++++| |+|++++|.|.+....+ ...|.++..++
T Consensus 53 ~~Y~~~~~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~v~ 128 (356)
T 1fg7_A 53 NRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSA----ETIGVECRTVP 128 (356)
T ss_dssp TSCCCSSCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHH----HHHTCEEEECC
T ss_pred ccCCCccHHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHH----HHcCCEEEEee
Confidence 4566666789999999999863 44444455699999999999999 99999999999866433 44577777775
Q ss_pred C-----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHH---HHHHHhcCCEEEEecCCCCCCc-cccc----cCCC
Q 013019 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV---SDLCHKKGAIVCIDGTFATPLN-QKAL----SLGA 348 (451)
Q Consensus 282 ~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~I---aelA~~~g~~lVVD~tfa~~~~-~~pl----~~Ga 348 (451)
. .|+++++++++ ++++|++++|+||||.+.+.++| +++|+ +|+++|+|++|..... .... ..+.
T Consensus 129 ~~~~~~~d~~~l~~~i~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~ 205 (356)
T 1fg7_A 129 TLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPH 205 (356)
T ss_dssp CCTTSCCCHHHHHTSCT--TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTT
T ss_pred CCCCCCCCHHHHHHHhc--CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCC
Confidence 3 47899999887 49999999999999999876555 55555 8999999999875431 1111 2356
Q ss_pred cEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH-----HHHHHHHHHHHHHHHHHH
Q 013019 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALRMAEI 423 (451)
Q Consensus 349 DiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t-----l~~Rl~~~~~nA~~Lae~ 423 (451)
++++.|+||.++.+| .+.|+++++++++++++..+..+ +.++..+..+...++. +..+.++..++.+.+.+.
T Consensus 206 ~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 282 (356)
T 1fg7_A 206 LAILRTLSKAFALAG-LRCGFTLANEEVINLLMKVIAPY--PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAA 282 (356)
T ss_dssp EEEEEESSSTTCCGG-GCCEEEEECHHHHHHHHHHSCSS--CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecchHhhcCch-hhhEEEEeCHHHHHHHHHhcCCC--CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999998665 56899999999999888766544 3566665555555543 455566777888999999
Q ss_pred HHcCCCeEE
Q 013019 424 LEAHPKVLL 432 (451)
Q Consensus 424 L~~~p~V~~ 432 (451)
|++++++..
T Consensus 283 L~~~~~~~~ 291 (356)
T 1fg7_A 283 LKEIPCVEQ 291 (356)
T ss_dssp HHHSTTEEE
T ss_pred HHhCCCceE
Confidence 999887544
No 40
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.91 E-value=1.7e-22 Score=203.27 Aligned_cols=225 Identities=14% Similarity=0.130 Sum_probs=173.6
Q ss_pred CccccCCCchhHHHHHHHHHhhhC----CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE
Q 013019 201 SFEYGRYGNPTTVVVEEKMSALEG----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (451)
Q Consensus 201 ~~~Y~R~~npt~~~Lee~LA~l~g----ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~ 276 (451)
.+.|+....+..+++++.+++++| .++.+++++|++|+..++.+++++||+|+++.+.|.+.... +...|.+
T Consensus 62 ~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~ 137 (391)
T 4dq6_A 62 IYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSV----VKNNNRE 137 (391)
T ss_dssp CCCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHH----HHHTTCE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHH----HHHcCCe
Confidence 466777777888899999999887 35678888888999999999999999999999999986643 3456888
Q ss_pred EEEeCCC---------CHHHHHHhhcCCCeEEEEEeCCCCCcccc---ccHHHHHHHHHhcCCEEEEecCCCCCCcc---
Q 013019 277 ATVIDPA---------DMEGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (451)
Q Consensus 277 v~~vd~~---------D~d~Le~ai~~~~tklV~lesPsNPtG~v---~DL~~IaelA~~~g~~lVVD~tfa~~~~~--- 341 (451)
+..++.. |+++|++++++ +++|++++|+||||.+ .++++|.++|+++|+++|+|++|+.....
T Consensus 138 ~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~ 215 (391)
T 4dq6_A 138 LIISPLQKLENGNYIMDYEDIENKIKD--VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHK 215 (391)
T ss_dssp EEECCCEECTTSCEECCHHHHHHHCTT--EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCC
T ss_pred EEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCC
Confidence 8777643 89999999976 8999999999999999 56889999999999999999998753211
Q ss_pred --ccccC-----CCcEEEECCcccCCccccceeEEEEeCH-HHHHHHHHHhHhhCC-CccHHHHHHHHHhhH----HHHH
Q 013019 342 --KALSL-----GADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGG-ALNPNAAYLIIRGMK----TLHL 408 (451)
Q Consensus 342 --~pl~~-----GaDiVv~S~SK~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~~G~-~ls~~~a~l~lrgL~----tl~~ 408 (451)
....+ +..+++.|+||.++.+| .++|++++++ +++++++......+. ..++..+..+...++ .+..
T Consensus 216 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 294 (391)
T 4dq6_A 216 HIPMASISKEFEKNTITCMAPTKTFNIAG-LQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLES 294 (391)
T ss_dssp CCCGGGSCHHHHHTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHH
T ss_pred ccCHHHcCccccCcEEEEEechhhccCcc-cceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHH
Confidence 11122 23489999999997665 5688888775 888888877654433 456655544444433 3555
Q ss_pred HHHHHHHHHHHHHHHHHc-CCCeEE
Q 013019 409 RVQQQNSTALRMAEILEA-HPKVLL 432 (451)
Q Consensus 409 Rl~~~~~nA~~Lae~L~~-~p~V~~ 432 (451)
+.++..++++.+.+.|++ .|++..
T Consensus 295 ~~~~~~~~~~~l~~~l~~~~~~~~~ 319 (391)
T 4dq6_A 295 FLEYLESNIDFAIKYINENMPKLKV 319 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCEe
Confidence 667778888999999988 577654
No 41
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.91 E-value=7.8e-23 Score=205.98 Aligned_cols=211 Identities=20% Similarity=0.271 Sum_probs=175.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC---
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~--- 283 (451)
.++...+||+++++++|.+++++++||++|+..++.++ +++||+|+++.+.|.++... +...|.++.+++..
T Consensus 33 ~~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~----~~~~G~~~~~~~~~~~~ 108 (367)
T 3nyt_A 33 LGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAET----VALLGAKPVYVDIDPRT 108 (367)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTT
T ss_pred CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHH----HHHcCCEEEEEecCCcc
Confidence 57889999999999999999999999999999999999 89999999999999987644 34568888887643
Q ss_pred ---CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCC--cEEEECC--c
Q 013019 284 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA--DLVLHSA--T 356 (451)
Q Consensus 284 ---D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~Ga--DiVv~S~--S 356 (451)
|+++|++++++ ++++|+ |+||+|...|+++|.++|+++|+++|+|++++.+........|. |+++.|+ +
T Consensus 109 ~~~d~~~l~~~i~~-~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~ 184 (367)
T 3nyt_A 109 YNLDPQLLEAAITP-RTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPS 184 (367)
T ss_dssp CSBCGGGTGGGCCT-TEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTSSSSEEEEECCTT
T ss_pred CCcCHHHHHHhcCc-CCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCeeccCCCCEEEEECCCC
Confidence 78999999987 499888 78999999999999999999999999999987654333323333 9999996 8
Q ss_pred ccCCccccceeEEEEe-CHHHHHHHHHHhHh------------hCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 013019 357 KFIGGHNDVLAGSISG-SGKLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEI 423 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~------------~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~ 423 (451)
|++++.+. +|++++ ++++.++++..+.. ++..+++..+.+.+..++.+....++..++++.+.+.
T Consensus 185 K~l~~~g~--gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~ 262 (367)
T 3nyt_A 185 APLGCYGD--GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLS 262 (367)
T ss_dssp SSSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCcCc--eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998663 888888 56788887765532 2345788888888888888888888888999999999
Q ss_pred HHcCC
Q 013019 424 LEAHP 428 (451)
Q Consensus 424 L~~~p 428 (451)
|++.+
T Consensus 263 L~~~~ 267 (367)
T 3nyt_A 263 LKQVG 267 (367)
T ss_dssp HHHTT
T ss_pred hccCC
Confidence 99874
No 42
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.91 E-value=5.2e-23 Score=207.47 Aligned_cols=221 Identities=16% Similarity=0.181 Sum_probs=168.5
Q ss_pred CchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHH----ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 208 GNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~al----l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
..+...+|+++|++++|. ++.+++++|++|+.+++.++ +++||+|+++++.|.+.+..+...+...|.++..+
T Consensus 65 ~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~ 144 (406)
T 1kmj_A 65 ATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVI 144 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEE
Confidence 356678899999999997 45667777889999999999 89999999999999987665555566678888887
Q ss_pred CC-----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc-ccccCCCcEEEEC
Q 013019 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHS 354 (451)
Q Consensus 281 d~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-~pl~~GaDiVv~S 354 (451)
+. .|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+... .....+.|+++.|
T Consensus 145 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s 223 (406)
T 1kmj_A 145 PLNPDGTLQLETLPTLFDE-KTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFS 223 (406)
T ss_dssp CBCTTSCBCGGGHHHHCCT-TEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEE
T ss_pred ecCCCCCcCHHHHHHHhcc-CCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEE
Confidence 64 378999999987 4999999999999999999999999999999999999998764321 2223579999999
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHHhH---------------------hhCCCccHHHHHHHH-HhhHHH-----H
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLII-RGMKTL-----H 407 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~---------------------~~G~~ls~~~a~l~l-rgL~tl-----~ 407 (451)
++|.++++| +|+++++++++++++.... .+....++..++.++ ..++.+ .
T Consensus 224 ~~K~~g~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 300 (406)
T 1kmj_A 224 GHKLYGPTG---IGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLN 300 (406)
T ss_dssp GGGTTSCTT---CEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHH
T ss_pred chhccCCCC---cEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHH
Confidence 999997665 6999999988887754321 011112223333222 233332 3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCeEE
Q 013019 408 LRVQQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 408 ~Rl~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
...++..++++.+.+.|++.|+++.
T Consensus 301 ~~~~~~~~~~~~l~~~L~~~~~~~~ 325 (406)
T 1kmj_A 301 NIAEYEQNLMHYALSQLESVPDLTL 325 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 4456666888899999998887754
No 43
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.90 E-value=4.3e-23 Score=209.33 Aligned_cols=225 Identities=14% Similarity=0.125 Sum_probs=168.7
Q ss_pred ccccCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHH---ccCCCeEEEcCCCCcchHHHHHHhhhcCCcE
Q 013019 202 FEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~al---l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~ 276 (451)
|.|++...+...++++++++++|.+ ..+++++|++++.+++.++ +++||+|+++.+.|.++...+....+..|.+
T Consensus 61 ~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~ 140 (406)
T 3cai_A 61 HPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAK 140 (406)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCE
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCe
Confidence 4444444677889999999999974 5666667779999988887 7899999999999998766554444446888
Q ss_pred EEEeCCC------CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCc
Q 013019 277 ATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGAD 349 (451)
Q Consensus 277 v~~vd~~------D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaD 349 (451)
+.+++.. |+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .....+|+|
T Consensus 141 v~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d 219 (406)
T 3cai_A 141 VKWAEVDIETGELPTWQWESLISK-STRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDAD 219 (406)
T ss_dssp EEEECCCTTTCCCCGGGHHHHCCT-TEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCS
T ss_pred EEEEecCcccCCcCHHHHHHHhCC-CceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcCCC
Confidence 8888754 78999999987 499999999999999999999999999999999999999876432 222345899
Q ss_pred EEEECCcccCCccccceeE-EEEeCHHHHHHHHHHhH---------hhCCCccHHHHHHHHHhhH---------------
Q 013019 350 LVLHSATKFIGGHNDVLAG-SISGSGKLVTQIRNLHH---------VLGGALNPNAAYLIIRGMK--------------- 404 (451)
Q Consensus 350 iVv~S~SK~l~G~gdv~gG-~Iv~~~eli~~lr~~~~---------~~G~~ls~~~a~l~lrgL~--------------- 404 (451)
+++.|++|+++ ++ +| +++++++++++++.... ...++.+......+...++
T Consensus 220 ~~~~s~~K~~g-~~---~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 295 (406)
T 3cai_A 220 VVTVNAHAWGG-PP---IGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRE 295 (406)
T ss_dssp EEEEEGGGGTS-CS---CEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHH
T ss_pred EEEeehhhhcC-CC---cCeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhh
Confidence 99999999876 33 56 99999988877654321 1122333333222222222
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 013019 405 ----TLHLRVQQQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 405 ----tl~~Rl~~~~~nA~~Lae~L~~~p~V~ 431 (451)
.+....++..++++.+.+.|++.|+++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 326 (406)
T 3cai_A 296 RLAVSMQSADAYLNRVFDYLMVSLRSLPLVM 326 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 244455667788899999999988874
No 44
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.90 E-value=1.3e-22 Score=206.11 Aligned_cols=220 Identities=15% Similarity=0.204 Sum_probs=165.9
Q ss_pred cCCCchh-HHHHHHHHHhhhC--------C-CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCC
Q 013019 205 GRYGNPT-TVVVEEKMSALEG--------A-ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (451)
Q Consensus 205 ~R~~npt-~~~Lee~LA~l~g--------a-e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~G 274 (451)
.+|+.+. ...|++.++++++ . ++.+++++|++|+..++.+++++||+|+++.+.|.++...+ ...|
T Consensus 55 ~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~----~~~g 130 (410)
T 3e2y_A 55 NQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMV----RMAG 130 (410)
T ss_dssp GSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTT
T ss_pred cCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHH----HHcC
Confidence 3444432 4567777777664 2 45666666779999999999999999999999999876443 4457
Q ss_pred cEEEEeCC----------------CCHHHHHHhhcCCCeEEEEEeCCCCCccccc---cHHHHHHHHHhcCCEEEEecCC
Q 013019 275 ITATVIDP----------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 275 i~v~~vd~----------------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~---DL~~IaelA~~~g~~lVVD~tf 335 (451)
.++..++. .|+++|++++++ ++++|++++|+||||.+. ++++|+++|+++|+++|+|++|
T Consensus 131 ~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~ 209 (410)
T 3e2y_A 131 AVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS-KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVY 209 (410)
T ss_dssp CEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred CEEEEEeccccccccccccccCCcCCHHHHHhhcCC-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhh
Confidence 76665543 389999999987 499999999999999995 7999999999999999999998
Q ss_pred CCCCcc-----cccc----CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH--
Q 013019 336 ATPLNQ-----KALS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-- 404 (451)
Q Consensus 336 a~~~~~-----~pl~----~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~-- 404 (451)
+..... .... .+.++++.|+||.++.+| .++|+++++++++++++..........++..+..+...++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 288 (410)
T 3e2y_A 210 EWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTG-WKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWID 288 (410)
T ss_dssp TTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGG-GCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred hhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCC-ceEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhh
Confidence 643211 1111 234599999999998666 5789999999999998877665555566766665555554
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 013019 405 ---------TLHLRVQQQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 405 ---------tl~~Rl~~~~~nA~~Lae~L~~~p~V~ 431 (451)
.+....++..++.+.+.+.|+++ ++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 323 (410)
T 3e2y_A 289 IKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLK 323 (410)
T ss_dssp HTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCE
T ss_pred hccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 35555677778889999999987 443
No 45
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.90 E-value=4.1e-22 Score=202.09 Aligned_cols=212 Identities=15% Similarity=0.164 Sum_probs=168.8
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHH
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~ 287 (451)
..+.++++++++++++|.++.+++++|++|+..++.+++++||+|+++++.|+.+... +...|.++..++..|+++
T Consensus 86 ~~~~~~~l~~~la~~~g~~~v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~----~~~~g~~~~~v~~~d~~~ 161 (398)
T 3a2b_A 86 TLDIHVELEEKLSAYVGKEAAILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDG----SRLSFSKVIKYGHNNMED 161 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHH----HHHSSSEEEEECTTCHHH
T ss_pred CcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHH----HHHcCCceEEeCCCCHHH
Confidence 3577899999999999999889999999999999999999999999999999987643 445688988888889999
Q ss_pred HHHhhcCC---CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-c--cc-cc-C----CCcEEEECC
Q 013019 288 LEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-Q--KA-LS-L----GADLVLHSA 355 (451)
Q Consensus 288 Le~ai~~~---~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~--~p-l~-~----GaDiVv~S~ 355 (451)
|++++++. ++++|++++|+||||.+.++++|.++|+++|+++|+|++|+.+.. . .+ .+ . ++|+++.|+
T Consensus 162 l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~ 241 (398)
T 3a2b_A 162 LRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTF 241 (398)
T ss_dssp HHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEES
T ss_pred HHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecc
Confidence 99999762 489999999999999999999999999999999999999976532 1 11 11 1 269999999
Q ss_pred cccCCccccceeEEEEeCHHHHHHHHHHh-H-hhCCCccHHHHHHHHHhhHH---HHHHHHHHHHHHHHHHHHHHcC
Q 013019 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLH-H-VLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 356 SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-~-~~G~~ls~~~a~l~lrgL~t---l~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
||+++.. ||+++++++++++++... . ......++..+..+...|+. +..+.++..++.+.+.+.|++.
T Consensus 242 sK~~~~~----GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 314 (398)
T 3a2b_A 242 SKSLASL----GGFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH 314 (398)
T ss_dssp SSTTCSS----CEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccCC----CcEEEeCHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999854 399999999999887742 2 22334445444333334433 3355667778888899999876
No 46
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.90 E-value=2.8e-22 Score=201.05 Aligned_cols=217 Identities=15% Similarity=0.094 Sum_probs=166.4
Q ss_pred chhHHHHHHHHHhhhCCC--c-EEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 209 NPTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae--~-~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
.+..+++++++++++|.+ + .+++++|++|+..++.+++++||+|+++++.|.+.. +...+...|+++..++.
T Consensus 52 ~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 129 (386)
T 2dr1_A 52 RKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKR--YKEVVESNGRKAVVLEYEPG 129 (386)
T ss_dssp HHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHH--HHHHHHHhCCceEEEecCCC
Confidence 567888999999999975 5 455677889999999999999999999999998731 22445567888877764
Q ss_pred --CCHHHHHHhhcC-CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECCccc
Q 013019 283 --ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKF 358 (451)
Q Consensus 283 --~D~d~Le~ai~~-~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~SK~ 358 (451)
.|+++|++++++ .++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .....+++|+++.|+||+
T Consensus 130 ~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~ 209 (386)
T 2dr1_A 130 KAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKA 209 (386)
T ss_dssp CCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTST
T ss_pred CCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEecccc
Confidence 589999999942 2489999999999999999999999999999999999999876533 222345789999999999
Q ss_pred CCccccceeEEEEeCHHHHHHHH----------------HHh--HhhCCCccHHHHHHHHHhhHH------HHHHHHHHH
Q 013019 359 IGGHNDVLAGSISGSGKLVTQIR----------------NLH--HVLGGALNPNAAYLIIRGMKT------LHLRVQQQN 414 (451)
Q Consensus 359 l~G~gdv~gG~Iv~~~eli~~lr----------------~~~--~~~G~~ls~~~a~l~lrgL~t------l~~Rl~~~~ 414 (451)
++++. .+|+++++++++++++ ... .....+.++..++.+...++. +..+.++..
T Consensus 210 ~~~~~--g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~ 287 (386)
T 2dr1_A 210 FGVPP--GLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYE 287 (386)
T ss_dssp TCCCS--SCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCCC--ceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 99874 2699999998888763 111 122234555555444444443 345567778
Q ss_pred HHHHHHHHHHHcCCCe
Q 013019 415 STALRMAEILEAHPKV 430 (451)
Q Consensus 415 ~nA~~Lae~L~~~p~V 430 (451)
++++.+.+.|+++ ++
T Consensus 288 ~~~~~l~~~L~~~-g~ 302 (386)
T 2dr1_A 288 KRAKMVREGVREI-GL 302 (386)
T ss_dssp HHHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHHHc-CC
Confidence 8899999999886 44
No 47
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.90 E-value=7.8e-23 Score=206.73 Aligned_cols=217 Identities=17% Similarity=0.204 Sum_probs=173.6
Q ss_pred ccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
|+++..+...+|+++|++++|.++.++++||++|+..++.++ +++||+|+++.+.|.++... +...|+++.+++.
T Consensus 32 ~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~----~~~~g~~~~~v~~ 107 (388)
T 1b9h_A 32 WWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQA----AQRLGAVTVPVDV 107 (388)
T ss_dssp CBTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEECB
T ss_pred eeecCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHHHHHH----HHHcCCEEEEEec
Confidence 455677889999999999999989999999999999999999 89999999999999987643 3556888887763
Q ss_pred ------CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc--c-cccCCCcEEEE
Q 013019 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--K-ALSLGADLVLH 353 (451)
Q Consensus 283 ------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~--~-pl~~GaDiVv~ 353 (451)
.|+++|+++++++ +++|+ |+||+|.+.|+++|.++|+++|++||+|++++.+... . ...++ |+++.
T Consensus 108 ~~~~~~~d~~~l~~~i~~~-~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~-~i~~~ 182 (388)
T 1b9h_A 108 DAATYNLDPEAVAAAVTPR-TKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELD-SIATF 182 (388)
T ss_dssp CTTTCCBCHHHHHHHCCTT-EEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGSS-SCEEE
T ss_pred CCCcCCCCHHHHHHhcCcC-ceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCeeccccc-ceEEE
Confidence 3799999999874 88887 9999999999999999999999999999999865432 1 22334 77888
Q ss_pred CCc--ccCCccccceeEEEEeCHH-H--HHHHHHHhHh-------------hCC--CccHHHHHHHHHhhHHHHHHHHHH
Q 013019 354 SAT--KFIGGHNDVLAGSISGSGK-L--VTQIRNLHHV-------------LGG--ALNPNAAYLIIRGMKTLHLRVQQQ 413 (451)
Q Consensus 354 S~S--K~l~G~gdv~gG~Iv~~~e-l--i~~lr~~~~~-------------~G~--~ls~~~a~l~lrgL~tl~~Rl~~~ 413 (451)
|++ |+++|. ++|+++++++ + +++++..... .|. .+++..++++..+++.+..+++++
T Consensus 183 S~s~~K~l~g~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~~~~~~ 259 (388)
T 1b9h_A 183 SFQNGKLMTAG---EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLDEQIAVR 259 (388)
T ss_dssp ECCTTSSSCSS---SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHHHHHHHH
T ss_pred EccCCCcccCC---CeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 876 777664 4899998875 5 5655543321 022 257777777777888888888888
Q ss_pred HHHHHHHHHHHHcCCCeEE
Q 013019 414 NSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 414 ~~nA~~Lae~L~~~p~V~~ 432 (451)
.++++.+.+.|+++|++..
T Consensus 260 ~~~~~~l~~~L~~~~~~~~ 278 (388)
T 1b9h_A 260 DERWTLLSRLLGAIDGVVP 278 (388)
T ss_dssp HHHHHHHHHHHHTSTTCEE
T ss_pred HHHHHHHHHHhccCCCccc
Confidence 8999999999999888754
No 48
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.90 E-value=1.7e-22 Score=208.13 Aligned_cols=213 Identities=16% Similarity=0.177 Sum_probs=173.5
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~L 288 (451)
.+...+|+++|++++|.++.++++||++|+..++.+++++||+|+++.+.|+++... +...|.++..++..|+++|
T Consensus 108 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~l 183 (427)
T 2w8t_A 108 FHDHMEVEQALRDFYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDG----CQQGNAEIVRFRHNSVEDL 183 (427)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHH----HHHSCSEEEEECTTCHHHH
T ss_pred cHHHHHHHHHHHHHhCCCceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHH----HHHcCCeeEEeCCCCHHHH
Confidence 477889999999999999999999999999999999999999999999999986643 3456888888888899999
Q ss_pred HHhhcCC---CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc---------ccccCCCcEEEECCc
Q 013019 289 EAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLVLHSAT 356 (451)
Q Consensus 289 e~ai~~~---~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~---------~pl~~GaDiVv~S~S 356 (451)
++++++. ++++|++++|+||+|.+.++++|.++|+++|+++|+|++++.+... ..+..++|+++.|++
T Consensus 184 e~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~s 263 (427)
T 2w8t_A 184 DKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFS 263 (427)
T ss_dssp HHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESS
T ss_pred HHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecch
Confidence 9999762 4899999999999999999999999999999999999998765332 111235799999999
Q ss_pred ccCCccccceeEEEEeCHHHHHHHHHHh--HhhCCCccHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcCCCe
Q 013019 357 KFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEILEAHPKV 430 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~~eli~~lr~~~--~~~G~~ls~~~a~l~lrgL~tl---~~Rl~~~~~nA~~Lae~L~~~p~V 430 (451)
|+++.. ||++++++++++.++... ..++..+++..+..+...++.+ ..+.++..++++.+.+.|++. ++
T Consensus 264 K~~g~~----gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 337 (427)
T 2w8t_A 264 KSVGTV----GGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM-GF 337 (427)
T ss_dssp STTCSC----CEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred hhhccC----CCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 999743 599999988888776542 2234556776666555555554 566778888899999999876 44
No 49
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.90 E-value=6.6e-22 Score=200.46 Aligned_cols=210 Identities=13% Similarity=0.170 Sum_probs=158.6
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 212 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 212 ~~~Lee~LA~l~----ga----e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
...|++.+++++ |. ++.+++++|++|+..++.+++++||+|+++.|.|.+.... ++..|.++..++.
T Consensus 70 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~ 145 (385)
T 1b5p_A 70 IPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEM----VRFAGGVVVEVETL 145 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH----HHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEeecC
Confidence 456667766665 42 4566666777999999999999999999999999876543 4456877776653
Q ss_pred ------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----ccccC--C
Q 013019 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSL--G 347 (451)
Q Consensus 283 ------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~pl~~--G 347 (451)
.|+++|+++++++ +++|++++|+||||.+++ +++|+++|+++|++||+|++|+..... ....+ +
T Consensus 146 ~~~~~~~d~~~l~~~l~~~-~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 224 (385)
T 1b5p_A 146 PEEGFVPDPERVRRAITPR-TKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPE 224 (385)
T ss_dssp GGGTTCCCHHHHHTTCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTT
T ss_pred cccCCCCCHHHHHHhcCCC-CEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCC
Confidence 4789999999874 999999999999999876 889999999999999999998764321 11222 5
Q ss_pred CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh-------HHHHHHHHHHHHHHHHH
Q 013019 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-------KTLHLRVQQQNSTALRM 420 (451)
Q Consensus 348 aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL-------~tl~~Rl~~~~~nA~~L 420 (451)
.++++.|+||.++.+| .++|+++++++++++++..+.......+....+.+...+ +.+....++..++.+.+
T Consensus 225 ~~i~~~s~SK~~~~~G-~RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 303 (385)
T 1b5p_A 225 HTLTVNGAAKAFAMTG-WRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLL 303 (385)
T ss_dssp TEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEechhhcCCcc-cceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHH
Confidence 6899999999998776 568999999999998887765544455555554443333 33444556667778888
Q ss_pred HHHHHcC
Q 013019 421 AEILEAH 427 (451)
Q Consensus 421 ae~L~~~ 427 (451)
.+.|+++
T Consensus 304 ~~~L~~~ 310 (385)
T 1b5p_A 304 LEGLTAL 310 (385)
T ss_dssp HHHHHHH
T ss_pred HHHHHHC
Confidence 8888875
No 50
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.90 E-value=6e-22 Score=198.77 Aligned_cols=226 Identities=18% Similarity=0.123 Sum_probs=174.3
Q ss_pred CccccCCCchhHHHHHHHHHhhhC----CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE
Q 013019 201 SFEYGRYGNPTTVVVEEKMSALEG----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (451)
Q Consensus 201 ~~~Y~R~~npt~~~Lee~LA~l~g----ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~ 276 (451)
.+.|+....+.++++++.+++.+| .++.+++++|++|+..++.+++++||+|+++.+.|.+.... +...|.+
T Consensus 54 ~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~ 129 (383)
T 3kax_A 54 IFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEM----VTTNNRQ 129 (383)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHCCTTCEEEECSSCCHHHHHH----HHHTTCE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHH----HHHcCCE
Confidence 456776667788899999999887 25677788888999999999999999999999999986643 4456888
Q ss_pred EEEeCC--------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----
Q 013019 277 ATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (451)
Q Consensus 277 v~~vd~--------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~---- 341 (451)
+..++. .|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.....
T Consensus 130 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~ 208 (383)
T 3kax_A 130 LCVSPLQKQNDTYAIDFEHLEKQFQQ-GVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTH 208 (383)
T ss_dssp EEECCCEEETTEEECCHHHHHHHHTT-TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC
T ss_pred EEeccceecCCcEEEcHHHHHHHhCc-CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCc
Confidence 777763 489999999965 4999999999999999986 566777799999999999998653211
Q ss_pred -cccc-----CCCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCC-CccHHHHHHHHHhhHH----HHHH
Q 013019 342 -KALS-----LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG-ALNPNAAYLIIRGMKT----LHLR 409 (451)
Q Consensus 342 -~pl~-----~GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~-~ls~~~a~l~lrgL~t----l~~R 409 (451)
.... .+.++++.|+||.++.+| .++|++++ +++++++++......+. ..++..+..+...++. +..+
T Consensus 209 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 287 (383)
T 3kax_A 209 TPFASLSEELAARTITCMAPSKTFNIAG-LQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTECNDWLNEI 287 (383)
T ss_dssp CCGGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTCHHHHHHH
T ss_pred eeHhhcCccccCcEEEEEEChhhccCcc-hhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhhHHHHHHH
Confidence 1111 145699999999998665 56788887 68888988877665543 5666665555554433 5556
Q ss_pred HHHHHHHHHHHHHHHHc-CCCeEE
Q 013019 410 VQQQNSTALRMAEILEA-HPKVLL 432 (451)
Q Consensus 410 l~~~~~nA~~Lae~L~~-~p~V~~ 432 (451)
.++..++.+.+.+.|++ .|++..
T Consensus 288 ~~~~~~~~~~l~~~l~~~~~~~~~ 311 (383)
T 3kax_A 288 RFYIEDNAKFACEYIKDHIPTLSV 311 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHHHHHHHHHhhCCCceE
Confidence 67778889999999988 677754
No 51
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.90 E-value=2e-22 Score=205.62 Aligned_cols=210 Identities=11% Similarity=0.112 Sum_probs=168.0
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHH
Q 013019 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLE 289 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le 289 (451)
+..++|+++|++++|.+..+++++|++|+..++.+++++||+|+++++.|+++... +...|.++..++..|+++|+
T Consensus 104 ~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~le 179 (409)
T 3kki_A 104 YDKPMIEKRLAKFTGFDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEG----ARYANAQAHPFMHNNCDHLR 179 (409)
T ss_dssp TTSCHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHH----HHHTTCEEEEECTTCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHH----HHHcCCeEEEecCCCHHHHH
Confidence 55678999999999999999999999999999999999999999999999887643 34458888888888999999
Q ss_pred HhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc---------cccCCCcEEEECCcccCC
Q 013019 290 AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLHSATKFIG 360 (451)
Q Consensus 290 ~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~---------pl~~GaDiVv~S~SK~l~ 360 (451)
++++++++++|++++|+||||.+.++++|.++|+++|++||+|++++.+.... .+..+.|+++.|++|.++
T Consensus 180 ~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~ 259 (409)
T 3kki_A 180 MLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFA 259 (409)
T ss_dssp HHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC
T ss_pred HHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhC
Confidence 99976448999999999999999999999999999999999999987543211 111247899999999998
Q ss_pred ccccceeEEEEeCHHHHHHHHHHhH--hhCCCccHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 013019 361 GHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 361 G~gdv~gG~Iv~~~eli~~lr~~~~--~~G~~ls~~~a~l~lrgL~tl---~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+. +|++++++++++.++.... .++...++..+..++..++.+ ....++..++.+.+.+.|++.
T Consensus 260 ~~----gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~ 327 (409)
T 3kki_A 260 YR----AGAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQL 327 (409)
T ss_dssp SS----CEEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CC----ceEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 76 5999999988887766432 234456666655444444443 445566677888888888876
No 52
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.90 E-value=7.9e-22 Score=199.06 Aligned_cols=214 Identities=16% Similarity=0.199 Sum_probs=163.9
Q ss_pred HHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 212 TVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 212 ~~~Lee~LA~l~----g----ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
...|++.+++++ | .++.+++++|++|+..++.+++++||+|+++++.|.+.... +...|.++..++.
T Consensus 69 ~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~~~ 144 (388)
T 1j32_A 69 EPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEM----VKLAEGTPVILPTT 144 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHH----HHHTTCEEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHcCCEEEEecCC
Confidence 456677776665 4 24566666677999999999999999999999999886543 4456888877764
Q ss_pred ------CCHHHHHHhhcCCCeEEEEEeCCCCCccccc---cHHHHHHHHHhcCCEEEEecCCCCCCcc-------cccc-
Q 013019 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ-------KALS- 345 (451)
Q Consensus 283 ------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~---DL~~IaelA~~~g~~lVVD~tfa~~~~~-------~pl~- 345 (451)
.|+++|+++++++ +++|++++|+||||.+. ++++|.++|+++|+++|+|++|+..... ..+.
T Consensus 145 ~~~~~~~d~~~l~~~l~~~-~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 223 (388)
T 1j32_A 145 VETQFKVSPEQIRQAITPK-TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASP 223 (388)
T ss_dssp GGGTTCCCHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCH
T ss_pred cccCCCCCHHHHHHhcCcC-ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccc
Confidence 3789999999874 99999999999999996 4899999999999999999998753211 1111
Q ss_pred --CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH----HHHHHHHHHHHHHHH
Q 013019 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALR 419 (451)
Q Consensus 346 --~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~----tl~~Rl~~~~~nA~~ 419 (451)
.+.|+++.|+||+++.+| .++|+++++++++++++..........++..++.+...|+ .+....++..++++.
T Consensus 224 ~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (388)
T 1j32_A 224 EAYERSVVCSGFAKTYAMTG-WRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRY 302 (388)
T ss_dssp HHHHTEEEEEESTTTTTCTT-TCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHH
T ss_pred cccCCEEEEeechhccCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 357899999999997665 5689999999999988877665445556665554444433 355566777788899
Q ss_pred HHHHHHcCCCeE
Q 013019 420 MAEILEAHPKVL 431 (451)
Q Consensus 420 Lae~L~~~p~V~ 431 (451)
+.+.|++.|++.
T Consensus 303 l~~~L~~~~g~~ 314 (388)
T 1j32_A 303 MLDALNAMPGLE 314 (388)
T ss_dssp HHHHHHTCTTCB
T ss_pred HHHHHhhCCCCc
Confidence 999999887764
No 53
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.90 E-value=6.2e-22 Score=200.61 Aligned_cols=215 Identities=13% Similarity=0.108 Sum_probs=163.1
Q ss_pred HHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 212 TVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 212 ~~~Lee~LA~l~----g----ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
..+|++++++++ | .++.+++++|++|+..++.+++++||+|+++.+.|.+.... +...|.++..++.
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~ 143 (399)
T 1c7n_A 68 TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMA----IKNQERKIIECELL 143 (399)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHH----HHTTTCEEEECCCE
T ss_pred cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHH----HHHcCCEEEecccc
Confidence 566777777763 5 35677777888999999999999999999999999986643 3455777776653
Q ss_pred -------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----ccc-c--
Q 013019 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-S-- 345 (451)
Q Consensus 283 -------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~pl-~-- 345 (451)
.|+++|++++++.++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+..... .++ .
T Consensus 144 ~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 223 (399)
T 1c7n_A 144 EKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSID 223 (399)
T ss_dssp EETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSC
T ss_pred cCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcC
Confidence 57999999997335999999999999999998 999999999999999999998753210 111 1
Q ss_pred ---CCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhCC-CccHHHHHHHHHhh----HHHHHHHHHHHHH
Q 013019 346 ---LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG-ALNPNAAYLIIRGM----KTLHLRVQQQNST 416 (451)
Q Consensus 346 ---~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G~-~ls~~~a~l~lrgL----~tl~~Rl~~~~~n 416 (451)
.+.++++.|+||.++.+| .++|+++++ ++++++++.....++. ..++..++.+...+ +.+....++..++
T Consensus 224 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 302 (399)
T 1c7n_A 224 EQLADKTITFTAPSKTFNIAG-MGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKN 302 (399)
T ss_dssp HHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ccccCcEEEEEeChhhccccc-hheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 245789999999998665 467998886 6799988877666543 45666555444443 3345556667788
Q ss_pred HHHHHHHHHc-CCCeE
Q 013019 417 ALRMAEILEA-HPKVL 431 (451)
Q Consensus 417 A~~Lae~L~~-~p~V~ 431 (451)
.+.+.+.|++ +|++.
T Consensus 303 ~~~l~~~L~~~~~~~~ 318 (399)
T 1c7n_A 303 QRIVKDFFEVNHPEIK 318 (399)
T ss_dssp HHHHHHHHHHHCTTSB
T ss_pred HHHHHHHHHhhCCCCe
Confidence 8899999988 67653
No 54
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.90 E-value=2.3e-22 Score=201.71 Aligned_cols=214 Identities=16% Similarity=0.177 Sum_probs=173.4
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC---
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~--- 283 (451)
.++...+|+++|+++++.++.+++++|++|+..++.++ +++||+|+++.+.|.++... +...|+++.+++..
T Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~ 111 (374)
T 3uwc_A 36 LGAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIASVGA----IVQAGATPVLVDSENGY 111 (374)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHH----HHHTTCEEEEECBCTTS
T ss_pred cChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHH----HHHcCCEEEEEecCCCC
Confidence 57889999999999999999999999999999999999 99999999999999987643 45678888888754
Q ss_pred --CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc--ccccCCCcEEEECCc--c
Q 013019 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KALSLGADLVLHSAT--K 357 (451)
Q Consensus 284 --D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~--~pl~~GaDiVv~S~S--K 357 (451)
|+++|+++++++ +++|+ |+||+|.+.|+++|.++|+++|+++|+|++++.+... .+.....|+++.|++ |
T Consensus 112 ~~d~~~l~~~~~~~-~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K 187 (374)
T 3uwc_A 112 VIDPEKIEAAITDK-TKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFVGSWGQFACFSLHPLK 187 (374)
T ss_dssp SBCGGGTGGGCCTT-EEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECSSSS
T ss_pred CcCHHHHHHhCCCC-ceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeeccccccEEEEeCCCCC
Confidence 889999999874 88888 8999999999999999999999999999998865332 222223799999976 9
Q ss_pred cCCccccceeEEEEeC-HHHHHHHHHHhHh------------hCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 013019 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~------------~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L 424 (451)
++++++ .+|+++++ +++.++++..+.. ....+.+..+.+.+..++.+....++..++++.+.+.|
T Consensus 188 ~l~~~g--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l 265 (374)
T 3uwc_A 188 NLNVWS--DAGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSF 265 (374)
T ss_dssp SSCCSS--CCEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHT
T ss_pred cCCccc--eeEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 998866 37888875 4677777765421 11234667777766677777777888888999999999
Q ss_pred HcCCC-eE
Q 013019 425 EAHPK-VL 431 (451)
Q Consensus 425 ~~~p~-V~ 431 (451)
++.++ +.
T Consensus 266 ~~~~~~~~ 273 (374)
T 3uwc_A 266 VDLSEFID 273 (374)
T ss_dssp GGGTTTEE
T ss_pred ccCCCeEE
Confidence 98876 54
No 55
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.90 E-value=1.9e-22 Score=203.03 Aligned_cols=212 Identities=14% Similarity=0.178 Sum_probs=171.6
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC--
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~-- 283 (451)
+.++...+||++|++++|.+++++++||++|+..++.++ +++||+|+++.+.|.++... +...|.++.+++..
T Consensus 33 ~~~~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~----~~~~g~~~~~~~~~~~ 108 (373)
T 3frk_A 33 ILGDEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALA----VSYTGAKPIFVEPDIR 108 (373)
T ss_dssp SSSHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHH----HHHHSCEEEEECEETT
T ss_pred cCCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHH----HHHcCCEEEEEecccc
Confidence 356889999999999999999999999999999999999 99999999999999987644 34558888887643
Q ss_pred ----CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCC--CcEEEECCc-
Q 013019 284 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT- 356 (451)
Q Consensus 284 ----D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~G--aDiVv~S~S- 356 (451)
|+++|++++++ ++++|+ |+||+|.+.|+++|.++|+++|+++|+|++++.+........| .|+++.|++
T Consensus 109 ~~~~d~~~l~~~l~~-~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~ 184 (373)
T 3frk_A 109 TYNIDPSLIESAITE-KTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKVGSLGDAAGFSFYP 184 (373)
T ss_dssp TTEECGGGTGGGCCT-TEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCT
T ss_pred ccCcCHHHHHHhcCC-CCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCEeccccccEEEEeCcC
Confidence 78999999987 499988 6889999999999999999999999999998865433322344 799999966
Q ss_pred -ccCCccccceeEEEEeC-HHHHHHHHHHhHhh------------CCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 013019 357 -KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL------------GGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAE 422 (451)
Q Consensus 357 -K~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~------------G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae 422 (451)
|++++++ .+|+++++ ++++++++..+... ...+.+..+.+.+..++.+....++..++++.+.+
T Consensus 185 ~K~l~~~g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (373)
T 3frk_A 185 AKNLGSLG--DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIA 262 (373)
T ss_dssp TSSSCCSS--SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCccCccc--eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998855 38888876 46777777654321 12356777777666677777777888888999999
Q ss_pred HHHcCC
Q 013019 423 ILEAHP 428 (451)
Q Consensus 423 ~L~~~p 428 (451)
.|++.+
T Consensus 263 ~l~~~~ 268 (373)
T 3frk_A 263 GINNPN 268 (373)
T ss_dssp HCCCTT
T ss_pred HhccCc
Confidence 998876
No 56
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.90 E-value=2.1e-22 Score=201.07 Aligned_cols=217 Identities=17% Similarity=0.166 Sum_probs=164.8
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCC--eEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD--~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
+|...+|+++|++++|.+..+++++|++|+..++.+++.+|| .|+++.+.|...+... ......|+++..++.
T Consensus 46 ~~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 124 (357)
T 3lws_A 46 GAIIEPFEQKFADVLGMDDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQD-GLKELHPIETILVGAADRL 124 (357)
T ss_dssp ETTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTT-HHHHHSSCEEEECSCTTSC
T ss_pred ChHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccc-hhhhccCcEEEEecCCCCC
Confidence 588999999999999998899999999999999999999998 6776666554433210 112334788777763
Q ss_pred CCHHHHHHhhcCCCeEEEEEeCCCCCc-ccccc---HHHHHHHHHhcCCEEEEecCCCC------CCccccccCCCcEEE
Q 013019 283 ADMEGLEAALNNNNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGADLVL 352 (451)
Q Consensus 283 ~D~d~Le~ai~~~~tklV~lesPsNPt-G~v~D---L~~IaelA~~~g~~lVVD~tfa~------~~~~~pl~~GaDiVv 352 (451)
.|+++|+++. + +++|++++|+||+ |.+.+ +++|.++|++||++||+|++|.. +.....+..+.|+++
T Consensus 125 ~d~~~l~~~~--~-~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~ 201 (357)
T 3lws_A 125 MTLDEIKALP--D-IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIY 201 (357)
T ss_dssp CCHHHHHTCC--S-CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEE
T ss_pred cCHHHHhcCc--C-cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEE
Confidence 4789998873 3 8999999999998 88874 89999999999999999998751 111222334579999
Q ss_pred ECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCc--cHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCe
Q 013019 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKV 430 (451)
Q Consensus 353 ~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~l--s~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V 430 (451)
.|+||+++++. +|+++++++++++++..+..++..+ ....+..+..+++....++++..++++.+.+.|+++|++
T Consensus 202 ~s~sK~~~~~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~ 278 (357)
T 3lws_A 202 ISFYKGLGGIA---GAILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYELRKDRMGQYYEQAKQLAEQFNALPGV 278 (357)
T ss_dssp EESSSTTCCSS---CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTE
T ss_pred EeccccCCCCc---eEEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999997765 6999999999999987776665432 222233334556665566777788899999999999988
Q ss_pred EE
Q 013019 431 LL 432 (451)
Q Consensus 431 ~~ 432 (451)
+.
T Consensus 279 ~~ 280 (357)
T 3lws_A 279 HT 280 (357)
T ss_dssp EE
T ss_pred ee
Confidence 64
No 57
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.90 E-value=2.4e-22 Score=205.16 Aligned_cols=213 Identities=14% Similarity=0.194 Sum_probs=161.5
Q ss_pred HHHHHHHHHhhhC----C-----CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 212 TVVVEEKMSALEG----A-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 212 ~~~Lee~LA~l~g----a-----e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
...|++.|+++++ . ++.+++++|++|+..++.+++++||+|+++.+.|.+.... +...|.++..++.
T Consensus 69 ~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~ 144 (422)
T 3fvs_A 69 YPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPM----TMMAGGRPVFVSL 144 (422)
T ss_dssp CHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHH----HHHcCCEEEEEec
Confidence 3455555555543 2 3566667777999999999999999999999999986643 3456777666532
Q ss_pred -----------------CCHHHHHHhhcCCCeEEEEEeCCCCCccccc---cHHHHHHHHHhcCCEEEEecCCCCCCcc-
Q 013019 283 -----------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ- 341 (451)
Q Consensus 283 -----------------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~---DL~~IaelA~~~g~~lVVD~tfa~~~~~- 341 (451)
.|+++|+++++++ +++|++++|+||||.+. ++++|.++|+++|+++|+|++|+.....
T Consensus 145 ~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~-~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 223 (422)
T 3fvs_A 145 KPGPIQNGELGSSSNWQLDPMELAGKFTSR-TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDG 223 (422)
T ss_dssp BCCCCCSSSCCBGGGSBCCHHHHHTTCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT
T ss_pred ccccccccccccccCCCCCHHHHHhhcCCC-ceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC
Confidence 4899999999874 99999999999999998 6999999999999999999998753211
Q ss_pred ----cccc----CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH---------
Q 013019 342 ----KALS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK--------- 404 (451)
Q Consensus 342 ----~pl~----~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~--------- 404 (451)
.... .+.++++.|+||.++.+| .+.|+++++++++++++..........++..++.+...++
T Consensus 224 ~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 302 (422)
T 3fvs_A 224 HQHISIASLPGMWERTLTIGSAGKTFSATG-WKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQP 302 (422)
T ss_dssp CCCCCGGGSTTTGGGEEEEEEHHHHHTCGG-GCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCT
T ss_pred CCCCChhhcccccCcEEEEecchhccCCcc-ceEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccch
Confidence 1111 245699999999998665 5689999999999998877665555566666665555554
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 013019 405 --TLHLRVQQQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 405 --tl~~Rl~~~~~nA~~Lae~L~~~p~V~ 431 (451)
.+....++..++.+.+.+.|+++ ++.
T Consensus 303 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 330 (422)
T 3fvs_A 303 SSYFVQFPQAMQRCRDHMIRSLQSV-GLK 330 (422)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTT-TCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-CCe
Confidence 34556677788889999999987 554
No 58
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.90 E-value=4.9e-22 Score=200.36 Aligned_cols=218 Identities=16% Similarity=0.163 Sum_probs=168.5
Q ss_pred CCCch-hHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 206 RYGNP-TTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 206 R~~np-t~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
+|+.+ ...+|+++|+++.+. ++.+++++|++|+..++.+++++||+|+++++.|.+.... ++..|.++..++.
T Consensus 56 ~y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~ 131 (381)
T 1v2d_A 56 QYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPD----AFLAGAKARLVRL 131 (381)
T ss_dssp SCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHcCCEEEEEeC
Confidence 34443 467899999999986 4677788888999999999999999999999999986643 4456777766653
Q ss_pred --------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----ccc--c
Q 013019 283 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL--S 345 (451)
Q Consensus 283 --------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~pl--~ 345 (451)
.|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... ... .
T Consensus 132 ~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~ 210 (381)
T 1v2d_A 132 DLTPEGFRLDLSALEKALTP-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFA 210 (381)
T ss_dssp EEETTEEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHC
T ss_pred CCCCccCCcCHHHHHHhcCc-CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhc
Confidence 379999999976 4999999999999999975 899999999999999999998754221 111 3
Q ss_pred CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH------HHHHHHHHHHHHHHH
Q 013019 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTALR 419 (451)
Q Consensus 346 ~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~------tl~~Rl~~~~~nA~~ 419 (451)
.+.|+++.|+||+++.+| .++|++++++++++.++........+.++...+.+...|+ .+....++..++++.
T Consensus 211 ~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 289 (381)
T 1v2d_A 211 PERTFTVGSAGKRLEATG-YRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDL 289 (381)
T ss_dssp TTTEEEEEEHHHHTTCGG-GCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeechhhcCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH
Confidence 478999999999998665 5689999999999888876655444555555444444443 234456667788888
Q ss_pred HHHHHHcCCCe
Q 013019 420 MAEILEAHPKV 430 (451)
Q Consensus 420 Lae~L~~~p~V 430 (451)
+.+.|++. ++
T Consensus 290 l~~~L~~~-g~ 299 (381)
T 1v2d_A 290 LAGGLRAM-GL 299 (381)
T ss_dssp HHHHHHHT-TC
T ss_pred HHHHHHHC-CC
Confidence 99999874 44
No 59
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.90 E-value=6.4e-22 Score=200.83 Aligned_cols=211 Identities=15% Similarity=0.175 Sum_probs=164.0
Q ss_pred hHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 211 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 211 t~~~Lee~LA~l~----ga----e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
...+|++.+++++ |. ++.+++++|++|+..++.+++++||+|+++++.|.+.... +...|.++..++.
T Consensus 79 g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~ 154 (389)
T 1o4s_A 79 GIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQ----IILAGGTVNVVET 154 (389)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHcCCEEEEEec
Confidence 4567888888876 53 4667777777999999999999999999999999986643 3456777776643
Q ss_pred -------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----c--ccc-
Q 013019 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----K--ALS- 345 (451)
Q Consensus 283 -------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~--pl~- 345 (451)
.|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+..... . .+.
T Consensus 155 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~ 233 (389)
T 1o4s_A 155 FMSKNFQPSLEEVEGLLVG-KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSE 233 (389)
T ss_dssp CGGGTTCCCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCS
T ss_pred CCccCCCCCHHHHHHhccc-CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCC
Confidence 278999999987 4999999999999999976 899999999999999999998754321 1 111
Q ss_pred -CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHH
Q 013019 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-LHLRVQQQNSTALRMAEI 423 (451)
Q Consensus 346 -~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t-l~~Rl~~~~~nA~~Lae~ 423 (451)
.+.|+++.|+||+++.+| .++|+++++++++++++..........++..++.+...|+. +....++..++++.+.+.
T Consensus 234 ~~~~~i~~~s~sK~~~~~G-~r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~l~~~ 312 (389)
T 1o4s_A 234 GFDRIVYINGFSKSHSMTG-WRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVER 312 (389)
T ss_dssp SSTTEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeechhhcCCcc-cceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 368999999999997665 56899999999999888776655555566666655555543 344456667788888889
Q ss_pred HHcC
Q 013019 424 LEAH 427 (451)
Q Consensus 424 L~~~ 427 (451)
|++.
T Consensus 313 L~~~ 316 (389)
T 1o4s_A 313 LKKM 316 (389)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9876
No 60
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.90 E-value=4.1e-22 Score=200.58 Aligned_cols=216 Identities=16% Similarity=0.163 Sum_probs=166.3
Q ss_pred CCCc-hhHHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc
Q 013019 206 RYGN-PTTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (451)
Q Consensus 206 R~~n-pt~~~Lee~LA~l~----ga----e-~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi 275 (451)
+|+. +....|++++++++ |. + +.+++++|++|+..++.+++++||+|+++++.|.+.... +...|.
T Consensus 58 ~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~----~~~~g~ 133 (376)
T 2dou_A 58 GYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGA----ARVASL 133 (376)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH----HHHTTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHH----HHHcCC
Confidence 4555 45778999999987 75 3 566667777999999999999999999999999886643 345688
Q ss_pred EEEEeCC-----CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc----ccc
Q 013019 276 TATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKA 343 (451)
Q Consensus 276 ~v~~vd~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~----~~p 343 (451)
++..++. .|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... ...
T Consensus 134 ~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~ 212 (376)
T 2dou_A 134 RTFLIPLREDGLADLKAVPEGVWR-EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSP 212 (376)
T ss_dssp EEEEECBCTTSSBCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCG
T ss_pred EEEEeeCCCCCCCCHHHHHHhhcc-CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCh
Confidence 8777763 467888888875 4899999999999999986 67899999999999999999865321 112
Q ss_pred cc----CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH----HHHHHHHHHHH
Q 013019 344 LS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNS 415 (451)
Q Consensus 344 l~----~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~----tl~~Rl~~~~~ 415 (451)
+. .+.++++.|+||.++.+| .++|+++++++++++++.....++...++..+..+...++ .+....++..+
T Consensus 213 ~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 291 (376)
T 2dou_A 213 LALPGAKERVVELFSLSKSYNLAG-FRLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRE 291 (376)
T ss_dssp GGSTTGGGTEEEEEEHHHHHTCGG-GCCEEEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred hhcCCCCCcEEEEecchhhcCChh-heeEEEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 22 246799999999998665 5689999999999999887766665566666555555443 34455566778
Q ss_pred HHHHHHHHHHcC
Q 013019 416 TALRMAEILEAH 427 (451)
Q Consensus 416 nA~~Lae~L~~~ 427 (451)
+.+.+.+.|+++
T Consensus 292 ~~~~l~~~L~~~ 303 (376)
T 2dou_A 292 RALGMAEALKGV 303 (376)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHHHHh
Confidence 888899999876
No 61
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.89 E-value=1.3e-22 Score=202.16 Aligned_cols=223 Identities=16% Similarity=0.172 Sum_probs=165.2
Q ss_pred ccccCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc----cCCCeEEEcCCCCcchHHHHHHhhhcCCc
Q 013019 202 FEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all----~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi 275 (451)
|.|++...+..+++++++++++|.+ +.+++++|++|+..++.+++ ++||+|+++++.|+++...+. .+...|+
T Consensus 35 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~-~~~~~g~ 113 (382)
T 4hvk_A 35 HSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGF 113 (382)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHHHTTC
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHH-HHHhcCC
Confidence 4455556777889999999999974 45666777799999999888 999999999999998766553 3456789
Q ss_pred EEEEeCCC-----CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc-ccccCCCc
Q 013019 276 TATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGAD 349 (451)
Q Consensus 276 ~v~~vd~~-----D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-~pl~~GaD 349 (451)
++.+++.. |+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+ +|+|++++.+... .....++|
T Consensus 114 ~~~~v~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~d 191 (382)
T 4hvk_A 114 EVEYIPVGKYGEVDVSFIDQKLRDD-TILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIGAD 191 (382)
T ss_dssp EEEEECBCTTSCBCHHHHHHHCCTT-EEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTCS
T ss_pred EEEEeccCCCCCcCHHHHHHHhccC-ceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCCC
Confidence 98888753 899999999874 9999999999999999999999999999999 9999998765432 22245789
Q ss_pred EEEECCcccCCccccceeEEEEeCHHHHHHHHHHh-------HhhCCCccHHHHHHHHHhh----HHHHHHHHHHHHHHH
Q 013019 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTAL 418 (451)
Q Consensus 350 iVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-------~~~G~~ls~~~a~l~lrgL----~tl~~Rl~~~~~nA~ 418 (451)
+++.|+||++++.+ .|+++.+++. +++... .......+....+.+...+ +.+....++..++++
T Consensus 192 ~~~~s~~K~~g~~g---~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 266 (382)
T 4hvk_A 192 MLTISSNDIYGPKG---VGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRD 266 (382)
T ss_dssp EEEEESGGGTSCTT---CEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeHHHhcCCCc---eEEEEEcCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999887665 5666655433 111111 0112233444433333333 234555667778888
Q ss_pred HHHHHHHcCCCeEE
Q 013019 419 RMAEILEAHPKVLL 432 (451)
Q Consensus 419 ~Lae~L~~~p~V~~ 432 (451)
.+.+.|++.|++..
T Consensus 267 ~l~~~L~~~~~~~~ 280 (382)
T 4hvk_A 267 RIIDNVLKIEESYL 280 (382)
T ss_dssp HHHHHHTTSTTEEE
T ss_pred HHHHHHhcCCCeEE
Confidence 99999998888754
No 62
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.89 E-value=6.7e-22 Score=202.95 Aligned_cols=229 Identities=17% Similarity=0.149 Sum_probs=172.6
Q ss_pred CCccccCCCchhHHHHHHHHHhhhC----CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc
Q 013019 200 ASFEYGRYGNPTTVVVEEKMSALEG----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (451)
Q Consensus 200 ~~~~Y~R~~npt~~~Lee~LA~l~g----ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi 275 (451)
..+.|+....+..+++.+++++.+| .+..+++++|++|+..++.+++++||+|++..+.|.+....+ ...|.
T Consensus 90 ~~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~----~~~g~ 165 (421)
T 3l8a_A 90 HIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTI----RLNDH 165 (421)
T ss_dssp CCSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHH----HHTTE
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHH----HHCCC
Confidence 3467877777778888888888887 245677777779999999999999999999999999866443 34566
Q ss_pred EEEEeCC--------CCHHHHHHhhcCCCeEEEEEeCCCCCcccc---ccHHHHHHHHHhcCCEEEEecCCCCCCc----
Q 013019 276 TATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLN---- 340 (451)
Q Consensus 276 ~v~~vd~--------~D~d~Le~ai~~~~tklV~lesPsNPtG~v---~DL~~IaelA~~~g~~lVVD~tfa~~~~---- 340 (451)
++..++. .|+++|++++++.++++|++++|+||+|.+ .++++|.++|+++|++||+|++|.....
T Consensus 166 ~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~ 245 (421)
T 3l8a_A 166 RLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNT 245 (421)
T ss_dssp EEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC
T ss_pred EEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC
Confidence 6665543 489999999983359999999999999988 4799999999999999999999764321
Q ss_pred ccc-cc-----CCCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhCC-CccHHHHHHHHHh----hHHHHH
Q 013019 341 QKA-LS-----LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG-ALNPNAAYLIIRG----MKTLHL 408 (451)
Q Consensus 341 ~~p-l~-----~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G~-~ls~~~a~l~lrg----L~tl~~ 408 (451)
..+ .. .+.++++.|++|.++.+| +++|+++++ +++++.++......+. ..+++.+..+... .+.+..
T Consensus 246 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~ 324 (421)
T 3l8a_A 246 HHSLNTLDASYKDFTIILSSATKTFNIAG-TKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEE 324 (421)
T ss_dssp CCCGGGSCTTGGGTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHH
T ss_pred CccHHHcCchhcCcEEEEEeChhhccCch-hheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhccHHHHHH
Confidence 111 11 245699999999998665 467888887 8888888876644433 4566554443333 334566
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEE
Q 013019 409 RVQQQNSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 409 Rl~~~~~nA~~Lae~L~~~p~V~~V 433 (451)
+.++..++.+.+.+.|+++|++..+
T Consensus 325 ~~~~~~~~~~~l~~~L~~~~~i~~~ 349 (421)
T 3l8a_A 325 LKTVIEGNIKLVIKELEAKTKIKVM 349 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEe
Confidence 6777788899999999888877654
No 63
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.89 E-value=2.3e-22 Score=201.52 Aligned_cols=220 Identities=12% Similarity=0.121 Sum_probs=167.2
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
+.+|+++...+|+++|++++|. ++.+++++|++|+..++.+++++||+|+++.+.|.+.... +...|.++..++
T Consensus 59 ~~~y~~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~v~ 134 (360)
T 3hdo_A 59 LRIYPSASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTL----AEVQGARVRTFG 134 (360)
T ss_dssp GGSCCCSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHH----HHHHTCEEEEEC
T ss_pred hhcCCCCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHH----HHHCCCEEEEee
Confidence 4556667678999999999984 6788888889999999999999999999999999986643 445688888877
Q ss_pred CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcccc----ccCCCcEEEECCcc
Q 013019 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA----LSLGADLVLHSATK 357 (451)
Q Consensus 282 ~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~p----l~~GaDiVv~S~SK 357 (451)
..+...+++..+..++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+....... ...+.++++.|+||
T Consensus 135 ~~~~~~~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK 214 (360)
T 3hdo_A 135 LTGDFRIAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSK 214 (360)
T ss_dssp BCTTSSBTTCCSSBCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTT
T ss_pred CCCCCCHHHHHhhcCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchH
Confidence 54221222222212367999999999999999999999999999999999999874211111 12356699999999
Q ss_pred cCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 013019 358 FIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~Lae~L~~~p~V~ 431 (451)
.++.+| .++|+++++++++++++.....+ ..++..++.+...| +.+..+.++..++.+.+.+.|+++ ++.
T Consensus 215 ~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~ 287 (360)
T 3hdo_A 215 SYSLAG-MRIGLAIARPEVIAALDKIRDHY--NLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GYD 287 (360)
T ss_dssp TTSCTT-SCCEEEECCHHHHHHHHHHSCSC--CSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred hhcCCc-cceeeEeeCHHHHHHHHHhCCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCE
Confidence 998665 56899999999999988776543 35566555444444 345666777888899999999887 553
No 64
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.89 E-value=6.7e-22 Score=198.44 Aligned_cols=218 Identities=14% Similarity=0.133 Sum_probs=166.3
Q ss_pred cCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
.+|+++...+|+++|++++|. ++.+++++|++++..++.++ +||+|++..+.|.+.... +...|.++..++.
T Consensus 54 ~~y~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~----~~~~g~~~~~v~~ 127 (364)
T 1lc5_A 54 ERYPDADYFHLHQALARHHQVPASWILAGNGETESIFTVASGL--KPRRAMIVTPGFAEYGRA----LAQSGCEIRRWSL 127 (364)
T ss_dssp GSCCCTTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHH----HHHTTCEEEEEEC
T ss_pred hcCCCCCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHH----HHHcCCeEEEEeC
Confidence 344556678999999999986 45666777789999999888 789999999999986643 3456777777654
Q ss_pred C-----C-HHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc--cccc----cCC
Q 013019 283 A-----D-MEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN--QKAL----SLG 347 (451)
Q Consensus 283 ~-----D-~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~--~~pl----~~G 347 (451)
. + ++++.+.+++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... ...+ ..+
T Consensus 128 ~~~~~~~~l~~~~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 206 (364)
T 1lc5_A 128 READGWQLTDAILEALTP-DLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNP 206 (364)
T ss_dssp CGGGTTCCCTTHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCT
T ss_pred CcccccchhHHHHHhccC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCC
Confidence 3 1 3545566655 4899999999999999998 89999999999999999999865321 1112 246
Q ss_pred CcEEEECCcccCCccccceeEEEE-eCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH---HHHHHHHHHHHHHHHHHH
Q 013019 348 ADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEI 423 (451)
Q Consensus 348 aDiVv~S~SK~l~G~gdv~gG~Iv-~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t---l~~Rl~~~~~nA~~Lae~ 423 (451)
.++++.|+||+++.+| .++|+++ ++++++++++.....+ ..++..++.+...|+. +..+.++..++.+.+.+.
T Consensus 207 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 283 (364)
T 1lc5_A 207 HIWVLRSLTKFYAIPG-LRLGYLVNSDDAAMARMRRQQMPW--SVNALAALAGEVALQDSAWQQATWHWLREEGARFYQA 283 (364)
T ss_dssp TEEEEEESTTTTTCTT-TCCEEEECCCHHHHHHHHHHSCTT--CSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECchhhcCCc-cceEEEEECCHHHHHHHHHhCCCC--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999998665 5679999 9999999888765433 4567777666666653 455566677888899999
Q ss_pred HHcCCCeEE
Q 013019 424 LEAHPKVLL 432 (451)
Q Consensus 424 L~~~p~V~~ 432 (451)
|+++|++..
T Consensus 284 L~~~~~~~~ 292 (364)
T 1lc5_A 284 LCQLPLLTV 292 (364)
T ss_dssp HHTSTTEEE
T ss_pred HhcCCCCEE
Confidence 998888753
No 65
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.89 E-value=4.3e-22 Score=198.64 Aligned_cols=220 Identities=17% Similarity=0.164 Sum_probs=163.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCe--EEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~--VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
.++...+|+++|++++|.+..+++++|++|+..++.+++.+||+ |+++.+.|...+... ......|.++..++.
T Consensus 46 ~~~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~ 124 (359)
T 3pj0_A 46 NGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQD-GLKELQQITPLLLGTANQ 124 (359)
T ss_dssp BSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTT-HHHHHHCCEEEECSCTTS
T ss_pred CCHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcc-hHHHhcCceEEecCCcCC
Confidence 46889999999999999988899999999999999999999987 555555443322110 111234788877764
Q ss_pred -CCHHHHHHhhcCCCeEEEEEeCCCCCc-cccccHH---HHHHHHHhcCCEEEEecCCCCCC------ccccccCCCcEE
Q 013019 283 -ADMEGLEAALNNNNVSLFFTESPTNPF-LRCVDVK---LVSDLCHKKGAIVCIDGTFATPL------NQKALSLGADLV 351 (451)
Q Consensus 283 -~D~d~Le~ai~~~~tklV~lesPsNPt-G~v~DL~---~IaelA~~~g~~lVVD~tfa~~~------~~~pl~~GaDiV 351 (451)
.|+++|+++ .+ ++++|++|+|+||+ |.+.+++ +|.++|++||++||+|+++.... ....+..+.|++
T Consensus 125 ~~d~~~l~~~-~~-~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~ 202 (359)
T 3pj0_A 125 LLTIDDIKSL-RE-PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSV 202 (359)
T ss_dssp CCCHHHHHTC-SS-CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEE
T ss_pred CcCHHHHHhc-cC-CceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEE
Confidence 379999988 55 59999999999998 6887755 55999999999999999864321 122233578999
Q ss_pred EECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCc--cHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 013019 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPK 429 (451)
Q Consensus 352 v~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~l--s~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~ 429 (451)
+.|+||+++++. +|+++++++++++++..+...+... ....+......++....++++..++++.+.+.|+++|+
T Consensus 203 ~~s~sK~~~~~~---gg~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g 279 (359)
T 3pj0_A 203 YVSFYKGIGGIA---GAILAGNDDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKRIGKMAEYFEAAKGLAERFNSCSG 279 (359)
T ss_dssp EEESSSTTCCSS---CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHTSTT
T ss_pred EEeccccCCCcc---eEEEECCHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCC
Confidence 999999998874 6899999999999988766555332 12222222345555556677788899999999999988
Q ss_pred eEEE
Q 013019 430 VLLL 433 (451)
Q Consensus 430 V~~V 433 (451)
+...
T Consensus 280 ~~~~ 283 (359)
T 3pj0_A 280 VKTV 283 (359)
T ss_dssp EEEE
T ss_pred ceee
Confidence 8543
No 66
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.89 E-value=6.4e-22 Score=201.69 Aligned_cols=214 Identities=18% Similarity=0.246 Sum_probs=174.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
..+...+|+++|++++|.++.+++++|++|+..++.++ +++||+|+++.+.|.++... +...|+++.+++.
T Consensus 61 ~~~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~ 136 (399)
T 2oga_A 61 LGPELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIASWLA----VSATGATPVPVEPHEDH 136 (399)
T ss_dssp SSHHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEECBCSSS
T ss_pred CchhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHH----HHHCCCEEEEEecCCCC
Confidence 34778999999999999988999999999999999999 89999999999999986643 4456888887753
Q ss_pred --CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCC--CcEEEECC--c
Q 013019 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSA--T 356 (451)
Q Consensus 283 --~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~G--aDiVv~S~--S 356 (451)
.|+++|++++++ ++++|+ |+||+|.+.|+++|.++|+++|+++|+|++++.+.......++ .|+++.|+ +
T Consensus 137 ~~~d~~~l~~~i~~-~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~~~s 212 (399)
T 2oga_A 137 PTLDPLLVEKAITP-RTRALL---PVHLYGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPG 212 (399)
T ss_dssp SSBCHHHHHHHCCT-TEEEEC---CBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEETTCTTCEEEEECCTT
T ss_pred CCcCHHHHHHhcCC-CCeEEE---EeCCcCCccCHHHHHHHHHHcCCEEEEECcccccCccCCeecccccCEEEEeCCCC
Confidence 379999999987 489887 5789999999999999999999999999999765322222234 69999999 7
Q ss_pred ccCCccccceeEEEEeC-HHHHHHHHHHhHhh----------C--CCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 013019 357 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL----------G--GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEI 423 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~----------G--~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~ 423 (451)
|+++++| ++|+++++ ++++++++..+... | ..+++..++++..+++.+....++..++++.+.+.
T Consensus 213 K~~~~~G--~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~ 290 (399)
T 2oga_A 213 KNLGCFG--DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYLSG 290 (399)
T ss_dssp SSSCCSS--CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcCC--ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998876 57888875 78888887654321 1 24578888887788888877778888889999999
Q ss_pred HHcCCCeE
Q 013019 424 LEAHPKVL 431 (451)
Q Consensus 424 L~~~p~V~ 431 (451)
|++.|+++
T Consensus 291 L~~~~g~~ 298 (399)
T 2oga_A 291 LAGLPGIG 298 (399)
T ss_dssp TTTCTTCB
T ss_pred hccCCCcc
Confidence 98887653
No 67
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.89 E-value=3.4e-22 Score=200.04 Aligned_cols=214 Identities=17% Similarity=0.177 Sum_probs=162.7
Q ss_pred chhHHHHHHHHHhhhCCCc----EEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC-
Q 013019 209 NPTTVVVEEKMSALEGAES----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~----~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~- 283 (451)
.+..+++++++++++|.+. .+++++|++|+. ++.+++++||+|+++++.|.+. .+...+...|+++..++..
T Consensus 34 ~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~ 110 (384)
T 3zrp_A 34 VEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVSNGVFGD--RWEQIFKRYPVNVKVLRPSP 110 (384)
T ss_dssp HHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEECSSHHHH--HHHHHHTTSSCEEEEECCST
T ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEecCCcchH--HHHHHHHHcCCcEEEecCCC
Confidence 4567889999999999754 667778889999 9999999999999999988663 2334456779998888753
Q ss_pred ----CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc-ccccCCCcEEEECCccc
Q 013019 284 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSATKF 358 (451)
Q Consensus 284 ----D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-~pl~~GaDiVv~S~SK~ 358 (451)
|+++|++++++.++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+... .....++|+++.|++|+
T Consensus 111 ~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~ 190 (384)
T 3zrp_A 111 GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKA 190 (384)
T ss_dssp TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTST
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCccc
Confidence 8999999998745999999999999999999999999999999999999998755322 22345799999999999
Q ss_pred CCccccceeEEEEeCHHHHHHH-------------HHHhHhh-------C---CCccHHHHHHHHHhhHH-----HHHHH
Q 013019 359 IGGHNDVLAGSISGSGKLVTQI-------------RNLHHVL-------G---GALNPNAAYLIIRGMKT-----LHLRV 410 (451)
Q Consensus 359 l~G~gdv~gG~Iv~~~eli~~l-------------r~~~~~~-------G---~~ls~~~a~l~lrgL~t-----l~~Rl 410 (451)
++|+. .+|++++++++++++ ..+.... + ++.+......+...++. +....
T Consensus 191 ~~~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~ 268 (384)
T 3zrp_A 191 LGSAA--GLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRI 268 (384)
T ss_dssp TCCCS--SEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred ccCCC--ceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHH
Confidence 87553 379999999988877 3222111 0 13344333333333332 34556
Q ss_pred HHHHHHHHHHHHHHHcC
Q 013019 411 QQQNSTALRMAEILEAH 427 (451)
Q Consensus 411 ~~~~~nA~~Lae~L~~~ 427 (451)
++..++++.+.+.|+++
T Consensus 269 ~~~~~~~~~l~~~L~~~ 285 (384)
T 3zrp_A 269 KRHTMVASAIRAGLEAL 285 (384)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHC
Confidence 67778888999999887
No 68
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.89 E-value=1e-21 Score=202.46 Aligned_cols=218 Identities=14% Similarity=0.122 Sum_probs=165.7
Q ss_pred chhHHHHHHHHHhhhC-------CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 209 NPTTVVVEEKMSALEG-------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 209 npt~~~Lee~LA~l~g-------ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
.+...+|+++++++++ .++.+++++|++|+..++.+++++||+|++++|.|.+... .+...|+++..++
T Consensus 95 ~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~ 170 (427)
T 3dyd_A 95 SIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKT----LAESMGIEVKLYN 170 (427)
T ss_dssp TTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH----HHHHTTCEEEEEE
T ss_pred CCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEEe
Confidence 3456789999999987 3677788888899999999999999999999999987653 3455677776654
Q ss_pred C-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc-----cccccC
Q 013019 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSL 346 (451)
Q Consensus 282 ~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~-----~~pl~~ 346 (451)
. .|+++|+++++++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... .....+
T Consensus 171 ~~~~~~~~~d~~~l~~~l~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~ 249 (427)
T 3dyd_A 171 LLPEKSWEIDLKQLEYLIDEK-TACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATL 249 (427)
T ss_dssp EEGGGTTEECHHHHHSSCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGG
T ss_pred cccccCCCCCHHHHHHHhccC-CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHh
Confidence 2 3899999999874 999999999999999999 99999999999999999999875321 111122
Q ss_pred CCc---EEEECCcccCCccccceeEEEEeC-------HHHHHHHHHHhHhhCCCccHHHHHHHHHhhH-----HHHHHHH
Q 013019 347 GAD---LVLHSATKFIGGHNDVLAGSISGS-------GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQ 411 (451)
Q Consensus 347 GaD---iVv~S~SK~l~G~gdv~gG~Iv~~-------~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~-----tl~~Rl~ 411 (451)
+.+ +++.|+||.++++| .+.|+++++ +++++.++...... ...++..+..+...|+ .+..+.+
T Consensus 250 ~~~~~vi~~~S~sK~~~~~G-~riG~~~~~~~~~~~~~~i~~~l~~~~~~~-~~~~~~~~~a~~~~L~~~~~~~~~~~~~ 327 (427)
T 3dyd_A 250 STDVPILSCGGLAKRWLVPG-WRLGWILIHDRRDIFGNEIRDGLVKLSQRI-LGPCTIVQGALKSILCRTPGEFYHNTLS 327 (427)
T ss_dssp CSSCCEEEEEESTTTSSCGG-GCCEEEEEECSTTSSHHHHHHHHHHHHHHH-CCSCHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CCCCcEEEEeeccccCCCcC-cceEEEEecCcchhhHHHHHHHHHHHHhcc-CCCCHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 333 77889999988777 456777765 46777776654332 2345555554444443 4566677
Q ss_pred HHHHHHHHHHHHHHcCCCeEEE
Q 013019 412 QQNSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~~p~V~~V 433 (451)
+..++++.+.+.|+++|++..+
T Consensus 328 ~~~~~~~~l~~~L~~~~g~~~~ 349 (427)
T 3dyd_A 328 FLKSNADLCYGALAAIPGLRPV 349 (427)
T ss_dssp HHHHHHHHHHHHHHHSTTEEEE
T ss_pred HHHHHHHHHHHHHhcCCCceec
Confidence 7888899999999999887543
No 69
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.89 E-value=2.1e-22 Score=202.02 Aligned_cols=214 Identities=13% Similarity=0.125 Sum_probs=162.1
Q ss_pred HHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC-
Q 013019 213 VVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (451)
Q Consensus 213 ~~Lee~LA~l~g--------ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~- 283 (451)
.++++.++++++ .++.+++++|++|+..++.+++++||+|+++.+.|.+.... +...|.++..++..
T Consensus 61 ~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~ 136 (377)
T 3fdb_A 61 SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHL----LSATQREGIFIDATG 136 (377)
T ss_dssp CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHH----HHHHTCCEEEEECTT
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHH----HHHcCCEEEEccCCC
Confidence 445566655544 36788888888999999999999999999999999986643 34457777777654
Q ss_pred --CHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc---c--cc-c---CCCc
Q 013019 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---K--AL-S---LGAD 349 (451)
Q Consensus 284 --D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~---~--pl-~---~GaD 349 (451)
|+++|+++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+..... . ++ . .+.+
T Consensus 137 ~~d~~~l~~~l~~~-~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 215 (377)
T 3fdb_A 137 GINLHDVEKGFQAG-ARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVC 215 (377)
T ss_dssp SCCHHHHHHHHHTT-CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHE
T ss_pred CCCHHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcE
Confidence 899999999875 899999999999999984 677888899999999999998753211 1 11 1 2345
Q ss_pred EEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH----HHHHHHHHHHHHHHHHHHH
Q 013019 350 LVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 350 iVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t----l~~Rl~~~~~nA~~Lae~L 424 (451)
+++.|+||.++.+| .++|+++. +++++++++..........++..++.+...++. +..+.++..++.+.+.+.|
T Consensus 216 i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 294 (377)
T 3fdb_A 216 ITITAPSKAWNIAG-LKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEI 294 (377)
T ss_dssp EEEECSTTTTTCGG-GCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeChHhccCcc-hhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999997666 46776665 788888888766555556667666555544443 5566777788899999999
Q ss_pred Hc-CCCeEE
Q 013019 425 EA-HPKVLL 432 (451)
Q Consensus 425 ~~-~p~V~~ 432 (451)
++ .|++..
T Consensus 295 ~~~~~~~~~ 303 (377)
T 3fdb_A 295 PKRIPGAKI 303 (377)
T ss_dssp HHHSTTCEE
T ss_pred HhhCCCceE
Confidence 88 677644
No 70
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.89 E-value=1.9e-21 Score=196.47 Aligned_cols=213 Identities=14% Similarity=0.115 Sum_probs=161.8
Q ss_pred HHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 212 TVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 212 ~~~Lee~LA~l~----ga----e-~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
..+|++++++++ |. + +.+++++|++|+..++.+++++||+|+++++.|.+.... +...|.++..++.
T Consensus 69 ~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~~ 144 (386)
T 1u08_A 69 VQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPA----IALSGGIVKRMAL 144 (386)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHH----HHHcCCEEEEeec
Confidence 456777777763 52 4 677788888999999999999999999999999986643 4456777776643
Q ss_pred ------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc-------cccc--
Q 013019 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-------QKAL-- 344 (451)
Q Consensus 283 ------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~-------~~pl-- 344 (451)
.|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... ...+
T Consensus 145 ~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 223 (386)
T 1u08_A 145 QPPHFRVDWQEFAALLSE-RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQ 223 (386)
T ss_dssp CTTTCCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHH
T ss_pred CcccCcCCHHHHHHhhcc-cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccC
Confidence 479999999976 4999999999999999985 78999999999999999999875321 1111
Q ss_pred cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH----HHHHHHHHHHHHHHH
Q 013019 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRM 420 (451)
Q Consensus 345 ~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t----l~~Rl~~~~~nA~~L 420 (451)
..+.|+++.|+||+++.+| .+.|+++++++++++++..........++..+..+...|+. +....++..++.+.+
T Consensus 224 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 302 (386)
T 1u08_A 224 LRERAVAVSSFGKTYHMTG-WKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDIL 302 (386)
T ss_dssp HHTTEEEEEEHHHHTTCGG-GCCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHH
T ss_pred ccCcEEEEecchhhcCCcc-cceEEEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 2468999999999998666 56799999999999888766544444555554444444442 444556667788888
Q ss_pred HHHHHcCCCeE
Q 013019 421 AEILEAHPKVL 431 (451)
Q Consensus 421 ae~L~~~p~V~ 431 (451)
.+.|+++ ++.
T Consensus 303 ~~~L~~~-g~~ 312 (386)
T 1u08_A 303 VNALNES-RLE 312 (386)
T ss_dssp HHHTTSS-SCE
T ss_pred HHHHHHC-CCe
Confidence 8888876 443
No 71
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.89 E-value=5.8e-22 Score=199.05 Aligned_cols=220 Identities=13% Similarity=0.079 Sum_probs=167.8
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
+...+|+++|++++|.+ +.+++++|++|+..++.++ +++||+|+++++.|.+....+....+..|.++..++.
T Consensus 59 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 138 (390)
T 1elu_A 59 QLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATL 138 (390)
T ss_dssp HHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGS
T ss_pred HHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCC
Confidence 67889999999999974 6778888999999999999 8999999999999998765554445566888888765
Q ss_pred ---CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHH----hcCCEEEEecCCCCCCcc-ccccCCCcEEEEC
Q 013019 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH----KKGAIVCIDGTFATPLNQ-KALSLGADLVLHS 354 (451)
Q Consensus 283 ---~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~----~~g~~lVVD~tfa~~~~~-~pl~~GaDiVv~S 354 (451)
.|+++|++++++ ++++|++++|+||||.+.|+++|.++|+ ++|+++|+|++++.+... .....+.|+++.|
T Consensus 139 ~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s 217 (390)
T 1elu_A 139 NQGDAAAVLANHLGP-KTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFT 217 (390)
T ss_dssp SSSCHHHHHHTTCCT-TEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEE
T ss_pred CccchHHHHHHhcCC-CceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEcc
Confidence 368999999987 4999999999999999999999999999 999999999998754221 1113578999999
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHHh----------------------HhhCCCccHHHHHH---HHHhhHH---H
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH----------------------HVLGGALNPNAAYL---IIRGMKT---L 406 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~----------------------~~~G~~ls~~~a~l---~lrgL~t---l 406 (451)
++|++.|+. ..|+++++++++++++... ....++.+...... +++.++. +
T Consensus 218 ~~K~~~~~~--g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~ 295 (390)
T 1elu_A 218 GHKWFAGPA--GVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTA 295 (390)
T ss_dssp SSSTTCCCT--TCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCH
T ss_pred ccccccCCC--ceEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 999555443 2699999988877665321 11122334433332 2333323 5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCeEE
Q 013019 407 HLRVQQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 407 ~~Rl~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
....++..++++.+.+.|++.|+++.
T Consensus 296 ~~~~~~~~~~~~~l~~~L~~~~g~~~ 321 (390)
T 1elu_A 296 EERYQAICQRSEFLWRGLNQLPHVHC 321 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEE
Confidence 55677788889999999999887743
No 72
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.89 E-value=1.9e-21 Score=196.39 Aligned_cols=210 Identities=11% Similarity=0.158 Sum_probs=162.4
Q ss_pred HHHHHHHHHhhh----C----CCc-EEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 212 TVVVEEKMSALE----G----AES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 212 ~~~Lee~LA~l~----g----ae~-~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
...|++.+++++ | .++ .+++++|++|+..++.+++++||+|+++++.|.+....+ ...|.++..++.
T Consensus 65 ~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~v~~ 140 (389)
T 1gd9_A 65 LLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAV----ILAGGKPVEVPT 140 (389)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHH----HHHTCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH----HHCCCEEEEecc
Confidence 466777777776 6 256 777888889999999999999999999999999866433 445777766542
Q ss_pred -------CCHHHHHHhhcCCCeEEEEEeCCCCCccccc---cHHHHHHHHHhcCCEEEEecCCCCCCcc-----cccc--
Q 013019 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS-- 345 (451)
Q Consensus 283 -------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~---DL~~IaelA~~~g~~lVVD~tfa~~~~~-----~pl~-- 345 (451)
.|+++|++++++ ++++|++++|+||||.+. ++++|.++|+++|+++|+|++|+..... ....
T Consensus 141 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 219 (389)
T 1gd9_A 141 YEEDEFRLNVDELKKYVTD-KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLD 219 (389)
T ss_dssp CGGGTTCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGST
T ss_pred CCccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhcc
Confidence 378999999987 499999999999999998 5999999999999999999998764321 1112
Q ss_pred --CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH------HHHHHHHHHHHHH
Q 013019 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTA 417 (451)
Q Consensus 346 --~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~------tl~~Rl~~~~~nA 417 (451)
.+.|+++.|+||.++.+| .++|+++++++++++++..........++...+.+...|+ .+....++..+++
T Consensus 220 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 298 (389)
T 1gd9_A 220 GMFERTITVNGFSKTFAMTG-WRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRR 298 (389)
T ss_dssp TCGGGEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecChhhcCCcc-cceEEEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Confidence 356899999999998665 5679999999999998877655545556666555444443 2444556677888
Q ss_pred HHHHHHHHcC
Q 013019 418 LRMAEILEAH 427 (451)
Q Consensus 418 ~~Lae~L~~~ 427 (451)
+.+.+.|+++
T Consensus 299 ~~l~~~L~~~ 308 (389)
T 1gd9_A 299 KLVWKRLNEM 308 (389)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 8889999886
No 73
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.89 E-value=5.6e-22 Score=202.70 Aligned_cols=211 Identities=9% Similarity=0.078 Sum_probs=162.3
Q ss_pred hHHHHHHHHHhhh----CC-----CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 211 TTVVVEEKMSALE----GA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 211 t~~~Lee~LA~l~----ga-----e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
....|+++|++++ |. ++.+++++|++|+..++.+++++||+|+++++.|.+....+ ...|.++..++
T Consensus 86 g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~ 161 (404)
T 2o1b_A 86 GKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGV----LLADGKPVPLN 161 (404)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHH----HHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHCCCEEEEec
Confidence 4567888888876 74 35666666779999999999999999999999999976443 44577766654
Q ss_pred C------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc----cccccC--
Q 013019 282 P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALSL-- 346 (451)
Q Consensus 282 ~------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~----~~pl~~-- 346 (451)
. .|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... .....+
T Consensus 162 ~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 240 (404)
T 2o1b_A 162 LEPPHYLPDWSKVDSQIID-KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASEN 240 (404)
T ss_dssp CCTTTCCCCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTT
T ss_pred cCcccCcCCHHHHHHhhcc-CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCC
Confidence 2 367888888875 4899999999999999985 78899999999999999999875432 112222
Q ss_pred --CCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH----HHHHHHHHHHHHHHH
Q 013019 347 --GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRM 420 (451)
Q Consensus 347 --GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t----l~~Rl~~~~~nA~~L 420 (451)
+.++++.|+||+++.+| .++|+++++++++++++......+...++...+.+...|+. +....++..++.+.+
T Consensus 241 ~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 319 (404)
T 2o1b_A 241 GKDVAIEIYSLSKGYNMSG-FRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRF 319 (404)
T ss_dssp HHHHEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecchhccCch-hheEeEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 45799999999998665 56899999999999998877666666677766655555543 444556677788889
Q ss_pred HHHHHcC
Q 013019 421 AEILEAH 427 (451)
Q Consensus 421 ae~L~~~ 427 (451)
.+.|+++
T Consensus 320 ~~~L~~~ 326 (404)
T 2o1b_A 320 EAMLAKA 326 (404)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9999887
No 74
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.89 E-value=1e-21 Score=198.68 Aligned_cols=209 Identities=15% Similarity=0.152 Sum_probs=162.5
Q ss_pred HHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC
Q 013019 212 TVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (451)
Q Consensus 212 ~~~Lee~LA~l~----g----ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~ 283 (451)
...|++.+++++ | .++.+++++|++|+..++.+++++||+|+++.+.|.+.... +...|.++..++..
T Consensus 70 ~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~~~ 145 (391)
T 3h14_A 70 LPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQI----LRALGLVPVDLPTA 145 (391)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHHTTCEEEEEECC
T ss_pred hHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHH----HHHcCCEEEEeecC
Confidence 456777777765 2 36778888888999999999999999999999999986643 44568887776542
Q ss_pred -------CHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc----cccccC-CC
Q 013019 284 -------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALSL-GA 348 (451)
Q Consensus 284 -------D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~----~~pl~~-Ga 348 (451)
|+++|+++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.... .....+ +.
T Consensus 146 ~~~~~~~d~~~l~~~----~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 221 (391)
T 3h14_A 146 PENRLQPVPADFAGL----DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDE 221 (391)
T ss_dssp GGGTTSCCHHHHTTS----CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSS
T ss_pred cccCCCCCHHHHHhc----CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCC
Confidence 78888766 3899999999999999987 88999999999999999999875321 112222 45
Q ss_pred cEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHHH
Q 013019 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR---GMKTLHLRVQQQNSTALRMAEILE 425 (451)
Q Consensus 349 DiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lr---gL~tl~~Rl~~~~~nA~~Lae~L~ 425 (451)
++++.|+||.++.+| .++|+++++++++++++......+...++..++.+.. ..+.+..+.++..++.+.+.+.|+
T Consensus 222 ~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 300 (391)
T 3h14_A 222 CYVINSFSKYFSMTG-WRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLP 300 (391)
T ss_dssp SEEEEESSSTTCCTT-SCCEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEechhccCCcc-ceeEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999997565 5689999999999999887777666666666554433 345566667778888889999998
Q ss_pred cCCC
Q 013019 426 AHPK 429 (451)
Q Consensus 426 ~~p~ 429 (451)
+++.
T Consensus 301 ~~~~ 304 (391)
T 3h14_A 301 KAGF 304 (391)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 7753
No 75
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.89 E-value=4.5e-22 Score=203.98 Aligned_cols=220 Identities=16% Similarity=0.158 Sum_probs=166.4
Q ss_pred CCCchh-HHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHHc--cCCC--eEEEcCCCCcchHHHHHHhhhc
Q 013019 206 RYGNPT-TVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALV--PAGG--HIVTTTDCYRKTRIFIETVLPK 272 (451)
Q Consensus 206 R~~npt-~~~Lee~LA~l~g--------ae~~vv~sSG~aAi~~al~all--~~GD--~VIv~~~~Y~~t~~~l~~~l~~ 272 (451)
+|+.+. ..+|++.++++++ .++.+++++|++|+..++.+++ ++|| +|+++.+.|.+....+ ..
T Consensus 77 ~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~----~~ 152 (437)
T 3g0t_A 77 IYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQC----RI 152 (437)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHH----HH
T ss_pred CCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHH----HH
Confidence 344443 4678888888776 3567777777799999999998 9999 9999999999866443 34
Q ss_pred CCcEEEEeCC------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc--
Q 013019 273 MGITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-- 341 (451)
Q Consensus 273 ~Gi~v~~vd~------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~-- 341 (451)
.|.++..++. .|+++|+++++..++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.....
T Consensus 153 ~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~ 232 (437)
T 3g0t_A 153 LGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKD 232 (437)
T ss_dssp HTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSC
T ss_pred cCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCC
Confidence 5666666653 27899999994335999999999999999986 778899999999999999998643211
Q ss_pred ----------ccc--cCCCcEEEECCcccCCccccceeEEEEeCHHHHH-H-----------------HHHHhHhhCCCc
Q 013019 342 ----------KAL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-Q-----------------IRNLHHVLGGAL 391 (451)
Q Consensus 342 ----------~pl--~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~-~-----------------lr~~~~~~G~~l 391 (451)
..+ ..+.++++.|+||.++.+| .++|++++++++++ + ++..........
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (437)
T 3g0t_A 233 YSHPGEPLYQPSVANYTDNYILALSSSKAFSYAG-QRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGA 311 (437)
T ss_dssp CCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGG-GCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSS
T ss_pred cCcccccchhhccCCCCCcEEEEEcCccCCCCcc-ceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCC
Confidence 111 2466799999999998665 56899999999888 7 665555444556
Q ss_pred cHHHHHHHHHhhHH-------HHHHHHHHHHHHHHHHHHHHcCCCeE
Q 013019 392 NPNAAYLIIRGMKT-------LHLRVQQQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 392 s~~~a~l~lrgL~t-------l~~Rl~~~~~nA~~Lae~L~~~p~V~ 431 (451)
++..++.+...++. +..+.++..++.+.+.+.|+++ ++.
T Consensus 312 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 357 (437)
T 3g0t_A 312 THSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFN 357 (437)
T ss_dssp CHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEE
T ss_pred CHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCE
Confidence 67666665555544 4556777888899999999988 554
No 76
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.89 E-value=2.8e-21 Score=197.28 Aligned_cols=212 Identities=12% Similarity=0.113 Sum_probs=162.8
Q ss_pred hhHHHHHHHHHhhh----CC-----CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 210 PTTVVVEEKMSALE----GA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 210 pt~~~Lee~LA~l~----ga-----e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
+....|++.+++++ |. ++.+++++|++|+..++.+++++||+|+++++.|.+....+ ...|.++..+
T Consensus 75 ~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~ 150 (412)
T 2x5d_A 75 RGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGA----VIAGAQVRSV 150 (412)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HHHTCEEEEE
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH----HHcCCEEEEe
Confidence 44567888888877 63 46777888889999999999999999999999999866443 3457777666
Q ss_pred CCC-------CHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc-------ccc
Q 013019 281 DPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-------QKA 343 (451)
Q Consensus 281 d~~-------D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~-------~~p 343 (451)
+.. |+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... ...
T Consensus 151 ~~~~~~~~~~d~~~l~~~i~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 229 (412)
T 2x5d_A 151 PLVPGIDFFNELERAIRESIP-KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQ 229 (412)
T ss_dssp ECSTTSCHHHHHHHHHHTEES-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGG
T ss_pred ecCCccCCCCCHHHHHHhccc-CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhh
Confidence 432 56889999986 4899999999999999986 68899999999999999999876432 111
Q ss_pred cc--CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH----HHHHHHHHHHHHH
Q 013019 344 LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 417 (451)
Q Consensus 344 l~--~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~----tl~~Rl~~~~~nA 417 (451)
+. .+.++++.|+||+++.+| .+.|+++++++++++++......+...++..++.+...|+ .+....++..++.
T Consensus 230 ~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 308 (412)
T 2x5d_A 230 VPGAKDIAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRR 308 (412)
T ss_dssp STTGGGTEEEEEECC-CCSCTT-SCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHH
T ss_pred ccCccCcEEEEecCccccCCcc-cceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 11 367899999999998665 4689999999999998877766555666766655554443 3455566677888
Q ss_pred HHHHHHHHcC
Q 013019 418 LRMAEILEAH 427 (451)
Q Consensus 418 ~~Lae~L~~~ 427 (451)
+.+.+.|+++
T Consensus 309 ~~l~~~L~~~ 318 (412)
T 2x5d_A 309 DVLVKGLREA 318 (412)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHC
Confidence 8888888875
No 77
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.89 E-value=2.1e-21 Score=193.55 Aligned_cols=217 Identities=14% Similarity=0.153 Sum_probs=166.2
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
+.+|+++...+|+++|+++++. ++.+++++|++|+..++.++ |+|+++.+.|.+.... +...|.++..++
T Consensus 55 ~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~----d~vi~~~~~~~~~~~~----~~~~g~~~~~~~ 126 (361)
T 3ftb_A 55 LGVYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF----EKILIIVPSYAEYEIN----AKKHGVSVVFSY 126 (361)
T ss_dssp GGSCCCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC----SEEEEEESCCTHHHHH----HHHTTCEEEEEE
T ss_pred hcCCCCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc----CcEEEecCChHHHHHH----HHHcCCeEEEee
Confidence 3455677788999999999985 45666677789999988876 9999999999986643 445688877765
Q ss_pred C-----CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc---cccc----cC
Q 013019 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN---QKAL----SL 346 (451)
Q Consensus 282 ~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~---~~pl----~~ 346 (451)
. .++++|++++++ +++|++++|+||||.+.+ +++|+++|++||+++|+|++|+.... .... ..
T Consensus 127 ~~~~~~~~~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 204 (361)
T 3ftb_A 127 LDENMCIDYEDIISKIDD--VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNY 204 (361)
T ss_dssp CCTTSCCCHHHHHHHTTT--CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTC
T ss_pred cCcccCCCHHHHHHhccC--CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccC
Confidence 3 367899999976 899999999999999985 67788888899999999999864322 1111 22
Q ss_pred CCcEEEECCcccCCccccceeEEEE-eCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHH
Q 013019 347 GADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAE 422 (451)
Q Consensus 347 GaDiVv~S~SK~l~G~gdv~gG~Iv-~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~nA~~Lae 422 (451)
+.++++.|+||.++.+| .++|+++ ++++++++++.....+ ..++..++.+...+ +.+..+.++..++.+.+.+
T Consensus 205 ~~~i~~~s~sK~~~~~G-~r~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ 281 (361)
T 3ftb_A 205 SCLFIIRAMTKFFAMPG-IRFGYGITNNKEIAAKIKAKQNPW--NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIE 281 (361)
T ss_dssp SSEEEEEESSSTTSCGG-GCCEEEEESCHHHHHHHHTTSCTT--CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeeChhhcCCCC-cceeEEEeCCHHHHHHHHhhCCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 34588999999998665 4678877 8999998888765543 45666665555544 4456667778889999999
Q ss_pred HHHcCCCeEEE
Q 013019 423 ILEAHPKVLLL 433 (451)
Q Consensus 423 ~L~~~p~V~~V 433 (451)
.|+++|++..+
T Consensus 282 ~l~~~~~~~~~ 292 (361)
T 3ftb_A 282 ELNKIGFIKRV 292 (361)
T ss_dssp HHHHSSSEEEE
T ss_pred HHHhCCCCcee
Confidence 99999988634
No 78
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.88 E-value=5.4e-21 Score=193.21 Aligned_cols=210 Identities=18% Similarity=0.141 Sum_probs=159.0
Q ss_pred HHHHHHHHHhhhC-----CC-cEEEeCCHHHHHHHHHHHHccCC-----CeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 212 TVVVEEKMSALEG-----AE-STVIMASGMSASTVMLLALVPAG-----GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 212 ~~~Lee~LA~l~g-----ae-~~vv~sSG~aAi~~al~all~~G-----D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
++++.+.+.+.+| .+ +.+++++|++|+..++.+++++| |+|+++.+.|.+... .+...|.++..+
T Consensus 72 r~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~----~~~~~g~~~~~v 147 (396)
T 3jtx_A 72 RQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEG----ATLLGGGEIHFA 147 (396)
T ss_dssp HHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHH----HHHHTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHH----HHHHcCCEEEEe
Confidence 3344444444445 34 67777788899999999999997 799999999987654 344568877776
Q ss_pred CC------CCHHHHHHhhcCCCeEEEEEeCCCCCccccccH---HHHHHHHHhcCCEEEEecCCCCCCcc--ccc-----
Q 013019 281 DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ--KAL----- 344 (451)
Q Consensus 281 d~------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL---~~IaelA~~~g~~lVVD~tfa~~~~~--~pl----- 344 (451)
+. .|+++|++++++ ++++|++++|+||||.+.+. ++|+++|+++|+++|+|++|...... .+.
T Consensus 148 ~~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 226 (396)
T 3jtx_A 148 NCPAPSFNPDWRSISEEVWK-RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQA 226 (396)
T ss_dssp ECCTTTCCCCGGGSCHHHHH-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHH
T ss_pred ecCCCCCccCHHHHHHhhcc-CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhh
Confidence 53 377888888877 49999999999999999865 55999999999999999998754221 111
Q ss_pred ------cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh---HHHHHHHHHHHH
Q 013019 345 ------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNS 415 (451)
Q Consensus 345 ------~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---~tl~~Rl~~~~~ 415 (451)
..+.++++.|+||.++.+| .++|+++++++++++++......+...++..+..+...+ +.+..+.++..+
T Consensus 227 ~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 305 (396)
T 3jtx_A 227 AAQLGRSRQKLLMFTSLSKRSNVPG-LRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQE 305 (396)
T ss_dssp HHHTTCCCTTEEEEEESTTTSSCGG-GCCEEEEECHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred hhhcccccCcEEEEeccccccCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 2567899999999887666 568999999999999988777766677777666555444 445566677778
Q ss_pred HHHHHHHHHHcC
Q 013019 416 TALRMAEILEAH 427 (451)
Q Consensus 416 nA~~Lae~L~~~ 427 (451)
+.+.+.+.|+++
T Consensus 306 ~~~~l~~~l~~~ 317 (396)
T 3jtx_A 306 KFERVIPILQQV 317 (396)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHHHhc
Confidence 888888888775
No 79
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.88 E-value=4.6e-21 Score=195.38 Aligned_cols=214 Identities=14% Similarity=0.159 Sum_probs=160.5
Q ss_pred HHHHHHHHHhhh----C--C--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 212 TVVVEEKMSALE----G--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 212 ~~~Lee~LA~l~----g--a--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
..+|++.+++++ | . ++.+++++|++|+..++.+++++||+|+++++.|.+.... +...|.++..++.
T Consensus 80 ~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~ 155 (406)
T 1xi9_A 80 LPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGL----VKFYGGKPVEYRTI 155 (406)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHHTTCEEEEEEEE
T ss_pred cHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHH----HHHcCCEEEEeecC
Confidence 456777777765 2 2 5677777778999999999999999999999999876543 3456777666542
Q ss_pred ------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----cc--ccCC
Q 013019 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA--LSLG 347 (451)
Q Consensus 283 ------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~p--l~~G 347 (451)
.|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+..... .. ++.+
T Consensus 156 ~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 234 (406)
T 1xi9_A 156 EEEDWQPDIDDIRKKITD-RTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKD 234 (406)
T ss_dssp GGGTSEECHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSS
T ss_pred CCcCCcCCHHHHHHhhCc-CceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCC
Confidence 279999999987 4999999999999999875 899999999999999999998754321 11 1135
Q ss_pred C-cEEEECCcccCCccccceeEEEE--eCH----HHHHHHHHHhHhhCCCccHHHHHHHHHhh----HHHHHHHHHHHHH
Q 013019 348 A-DLVLHSATKFIGGHNDVLAGSIS--GSG----KLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNST 416 (451)
Q Consensus 348 a-DiVv~S~SK~l~G~gdv~gG~Iv--~~~----eli~~lr~~~~~~G~~ls~~~a~l~lrgL----~tl~~Rl~~~~~n 416 (451)
. |+++.|+||+++.+| .+.|+++ +++ +++++++...... ...++..++.+...| +.+....++..++
T Consensus 235 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 312 (406)
T 1xi9_A 235 VPVIVMNGLSKVYFATG-WRLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKER 312 (406)
T ss_dssp SCEEEEEESTTTTCCGG-GCCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred ceEEEEeccccccCCCc-cEEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHH
Confidence 6 899999999998665 4578888 888 9999888766543 344555444444444 2344455667778
Q ss_pred HHHHHHHHHcCCCeEE
Q 013019 417 ALRMAEILEAHPKVLL 432 (451)
Q Consensus 417 A~~Lae~L~~~p~V~~ 432 (451)
.+.+.+.|++.|++..
T Consensus 313 ~~~l~~~L~~~~~~~~ 328 (406)
T 1xi9_A 313 RDYIYKRLNEIPGIST 328 (406)
T ss_dssp HHHHHHHHHTSTTEEC
T ss_pred HHHHHHHHHhCCCCee
Confidence 8889999998887643
No 80
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.88 E-value=4.6e-22 Score=201.04 Aligned_cols=224 Identities=15% Similarity=0.137 Sum_probs=164.3
Q ss_pred ccccCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc----cCCC-eEEEcCCCCcchHHHHHHhhhcCC
Q 013019 202 FEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGG-HIVTTTDCYRKTRIFIETVLPKMG 274 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all----~~GD-~VIv~~~~Y~~t~~~l~~~l~~~G 274 (451)
+.|+++..+..+++++++++++|.+ +.+++++|++|+..++.+++ ++|| +|+++++.|+++...+.. +...|
T Consensus 55 ~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~-~~~~g 133 (400)
T 3vax_A 55 HEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEH-LAGRG 133 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHH-HHTTT
T ss_pred chhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHH-HHhcC
Confidence 4556666677889999999999974 67777788899999999987 8999 999999999987766543 35678
Q ss_pred cEEEEeCCC-----CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcccc-ccCCC
Q 013019 275 ITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA-LSLGA 348 (451)
Q Consensus 275 i~v~~vd~~-----D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~p-l~~Ga 348 (451)
+++.+++.. |+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+..... ... +
T Consensus 134 ~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~-~ 211 (400)
T 3vax_A 134 FEVDFLTPGPSGRISVEGVMERLRPD-TLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP-I 211 (400)
T ss_dssp CEEEEECCCTTCCCCHHHHHTTCCTT-EEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC-C
T ss_pred CeEEEEccCCCCCcCHHHHHHhcCCC-ceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc-C
Confidence 998888753 899999999874 99999999999999999999999999999999999999876543222 223 8
Q ss_pred cEEEECCcccCCccccceeEEEE-eCH-HHH---HHHHHHh-------HhhCCCccHHHHHHHHHhhHH----HHHHHHH
Q 013019 349 DLVLHSATKFIGGHNDVLAGSIS-GSG-KLV---TQIRNLH-------HVLGGALNPNAAYLIIRGMKT----LHLRVQQ 412 (451)
Q Consensus 349 DiVv~S~SK~l~G~gdv~gG~Iv-~~~-eli---~~lr~~~-------~~~G~~ls~~~a~l~lrgL~t----l~~Rl~~ 412 (451)
|+++.|++|.+++.+ .|+++ .++ ++. ..++... .......+....+.+..+++. +....++
T Consensus 212 d~~~~s~~K~~g~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 288 (400)
T 3vax_A 212 DMISISGHKIGAPKG---VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVA 288 (400)
T ss_dssp SEEEEETGGGTSCSS---CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred cEEEEeHHHhCCCCc---eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 999999999766554 45655 544 221 1111111 111233444444433344433 3445566
Q ss_pred HHHHHHHHHHHHHcCCCeEE
Q 013019 413 QNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 413 ~~~nA~~Lae~L~~~p~V~~ 432 (451)
..++++.+.+.|+ .+++..
T Consensus 289 ~~~~~~~l~~~L~-~~~~~~ 307 (400)
T 3vax_A 289 AQDLRSRLLAGLA-STSFQV 307 (400)
T ss_dssp HHHHHHHHHHHHT-TTTCEE
T ss_pred HHHHHHHHHHhhC-CCCEEE
Confidence 6777888888888 777753
No 81
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.88 E-value=1.5e-21 Score=197.01 Aligned_cols=217 Identities=14% Similarity=0.144 Sum_probs=164.3
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 209 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae---~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
.+..+++++++++++|.+ ..+++++|++|+..++.+++++||+|+++++.|.+. .+...+...|.++..++.
T Consensus 66 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~ 143 (393)
T 1vjo_A 66 LALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGN--RLVDMAGRYGADVRTISKPWG 143 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHH--HHHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHH--HHHHHHHHcCCceEEEecCCC
Confidence 356788999999999974 456667788999999999999999999999999872 122345567888777753
Q ss_pred --CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECCcccC
Q 013019 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (451)
Q Consensus 283 --~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~SK~l 359 (451)
.|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.. ......++|+++.|++|++
T Consensus 144 ~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l 223 (393)
T 1vjo_A 144 EVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGL 223 (393)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTT
T ss_pred CCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccc
Confidence 5899999999761389999999999999999999999999999999999999873321 1112347899999999999
Q ss_pred CccccceeEEEEeCHHHHHHHHHHh--------------------HhhCCCccHHHHHHHHHhhHHH-----HHHHHHHH
Q 013019 360 GGHNDVLAGSISGSGKLVTQIRNLH--------------------HVLGGALNPNAAYLIIRGMKTL-----HLRVQQQN 414 (451)
Q Consensus 360 ~G~gdv~gG~Iv~~~eli~~lr~~~--------------------~~~G~~ls~~~a~l~lrgL~tl-----~~Rl~~~~ 414 (451)
++++ ..|+++++++++++++... ...+++.+......+...++.+ ....++..
T Consensus 224 ~~~~--~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 301 (393)
T 1vjo_A 224 GCSP--GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQ 301 (393)
T ss_dssp CSCS--SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred cCCC--ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 8876 4699999999888775320 0011145555555444455443 34566777
Q ss_pred HHHHHHHHHHHcCCCe
Q 013019 415 STALRMAEILEAHPKV 430 (451)
Q Consensus 415 ~nA~~Lae~L~~~p~V 430 (451)
++++.+.+.|++. ++
T Consensus 302 ~~~~~l~~~L~~~-g~ 316 (393)
T 1vjo_A 302 KNVEYLWERLEDI-GL 316 (393)
T ss_dssp HHHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHHHc-CC
Confidence 8888999999876 44
No 82
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.88 E-value=1.1e-21 Score=199.00 Aligned_cols=170 Identities=10% Similarity=0.090 Sum_probs=138.8
Q ss_pred chhHHHHHHHHHhhhCCCc--EE-EeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC--
Q 013019 209 NPTTVVVEEKMSALEGAES--TV-IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~--~v-v~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~-- 283 (451)
.+...++++++++++|.+. .+ +++||++|+..++.+++++||+|+++++.|.+.. +...+...|+++..++..
T Consensus 43 ~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 120 (416)
T 3isl_A 43 TGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYL--LTEIAERYGANVHMLECEWG 120 (416)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHhcCCeeEEEecCCC
Confidence 4557889999999999743 34 5678889999999999999999999999987632 334566778888887643
Q ss_pred ---CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECCcccC
Q 013019 284 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (451)
Q Consensus 284 ---D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~SK~l 359 (451)
|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......|+|+++.|++|++
T Consensus 121 ~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l 200 (416)
T 3isl_A 121 TVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCL 200 (416)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTT
T ss_pred CCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCcccc
Confidence 899999999832489999999999999999999999999999999999999875432 2233468999999999986
Q ss_pred CccccceeEEEEeCHHHHHHHHH
Q 013019 360 GGHNDVLAGSISGSGKLVTQIRN 382 (451)
Q Consensus 360 ~G~gdv~gG~Iv~~~eli~~lr~ 382 (451)
.|+. .+|+++.+++++++++.
T Consensus 201 ~g~~--g~g~~~~~~~~~~~~~~ 221 (416)
T 3isl_A 201 SVPS--GMAPITYNERVADVIAA 221 (416)
T ss_dssp CCCS--SEEEEEECHHHHHHHHT
T ss_pred CCCC--CeEEEEECHHHHHHhhc
Confidence 6554 37899999999888763
No 83
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.88 E-value=6.1e-22 Score=198.31 Aligned_cols=218 Identities=15% Similarity=0.156 Sum_probs=159.1
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc----cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all----~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
.+...++++++++++|.+ +.+++++|++|+.+++.++. ++||+|+++++.|.++...+. .+...|+++.+++.
T Consensus 42 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~ 120 (382)
T 4eb5_A 42 REAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGFEVEYIPV 120 (382)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHTTTTCEEEEECB
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHH-HHHhCCcEEEEecc
Confidence 466788999999999974 56666788899999999988 899999999999988765553 34557888888874
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc-ccccCCCcEEEECCc
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSAT 356 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-~pl~~GaDiVv~S~S 356 (451)
.|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|++ |+|++++.+... ....+++|+++.|+|
T Consensus 121 ~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~s 198 (382)
T 4eb5_A 121 GKYGEVDVSFIDQKLRDD-TILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSN 198 (382)
T ss_dssp CTTSCBCHHHHHHHCCTT-EEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEETG
T ss_pred CCCCccCHHHHHHHhcCC-CeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEEEeehH
Confidence 4899999999874 99999999999999999999999999999999 999998743211 112347899999999
Q ss_pred ccCCccccceeEEEEeCHHH-HHHHHH----HhHhhCCCccHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHHcC
Q 013019 357 KFIGGHNDVLAGSISGSGKL-VTQIRN----LHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~~el-i~~lr~----~~~~~G~~ls~~~a~l~lrgL~----tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
|+++..| .|+++++++. +..+.. .........+......+...++ .+..+.++..++++.+.+.|++.
T Consensus 199 K~~g~~g---~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 275 (382)
T 4eb5_A 199 DIYGPKG---VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKI 275 (382)
T ss_dssp GGTCCSS---CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HhcCCCc---eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhC
Confidence 9876544 4666666542 111100 0111122334333332222333 24455677778899999999988
Q ss_pred CCeEE
Q 013019 428 PKVLL 432 (451)
Q Consensus 428 p~V~~ 432 (451)
|+++.
T Consensus 276 ~~~~~ 280 (382)
T 4eb5_A 276 EESYL 280 (382)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 87753
No 84
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.88 E-value=2.9e-21 Score=195.48 Aligned_cols=222 Identities=16% Similarity=0.139 Sum_probs=166.7
Q ss_pred ccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccC----------CCeEEEcCCCCcchHHHHHHhhh
Q 013019 202 FEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA----------GGHIVTTTDCYRKTRIFIETVLP 271 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~----------GD~VIv~~~~Y~~t~~~l~~~l~ 271 (451)
+.+.++.++...+|+++|++++|.++++++++|++|+..++..+..+ ||+|++..+.|.+..........
T Consensus 70 ~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~ 149 (392)
T 3ruy_A 70 LTSRAFHSDQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSS 149 (392)
T ss_dssp CCCTTSEETTHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCS
T ss_pred ccccccCCHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccC
Confidence 34445678899999999999999888999999999999999877655 67999999999764433222111
Q ss_pred c---------CCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCC
Q 013019 272 K---------MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP 338 (451)
Q Consensus 272 ~---------~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~ 338 (451)
. ....+..++..|+++|++++++ ++++|++++|+||||.+.+ +++|.++|++||+++|+|+++...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~ 228 (392)
T 3ruy_A 150 NEEYKRGFGPMLPGIIVIPYGDLEALKAAITP-NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGL 228 (392)
T ss_dssp CTTTTTTCCSCCSSEEEECTTCHHHHHHHCCT-TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT
T ss_pred ChhhccccCCCCCCCeeeCcccHHHHHHHhcc-CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCC
Confidence 1 1123555666799999999986 4999999999999999998 999999999999999999998532
Q ss_pred ------CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHH--HHH
Q 013019 339 ------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRV 410 (451)
Q Consensus 339 ------~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~--~Rl 410 (451)
..........|+++ +||.++| |..++|++++++++++.++..........++..+..+...++.+. ...
T Consensus 229 ~~~g~~~~~~~~~~~~d~~~--~SK~l~g-G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 305 (392)
T 3ruy_A 229 GRTGKVFACDWDNVTPDMYI--LGKALGG-GVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLT 305 (392)
T ss_dssp TTTSSSSGGGGGTCCCSEEE--ECGGGGT-TTSCCEEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred CccccchhhhccCCCCCEEE--EchhhhC-ChhhhEEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhhhHH
Confidence 11122233467774 5699887 324689999999888777655444445567777777666666553 345
Q ss_pred HHHHHHHHHHHHHHHcC
Q 013019 411 QQQNSTALRMAEILEAH 427 (451)
Q Consensus 411 ~~~~~nA~~Lae~L~~~ 427 (451)
++..++++.+.+.|++.
T Consensus 306 ~~~~~~~~~l~~~L~~~ 322 (392)
T 3ruy_A 306 ERSLQLGEKLVGQLKEI 322 (392)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 66777888888888876
No 85
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.88 E-value=1.3e-21 Score=195.77 Aligned_cols=217 Identities=17% Similarity=0.117 Sum_probs=162.1
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc----cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all----~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
.+...+|++++++++|.+ +.+++++|++|+..++.++. ++||+|+++++.|.+....+. .+...|.++..++.
T Consensus 43 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~ 121 (384)
T 1eg5_A 43 NLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMK-YLSMKGFKVKYVPV 121 (384)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHH-HHHHTTCEEEECCB
T ss_pred HHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHH-HHHhcCCEEEEEcc
Confidence 455688999999999964 67777888899999999987 799999999999988665543 34556888888764
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcC--CEEEEecCCCCCCc-cccccCCCcEEEEC
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLN-QKALSLGADLVLHS 354 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g--~~lVVD~tfa~~~~-~~pl~~GaDiVv~S 354 (451)
.|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++| +++|+|++++.+.. .....++.|+++.|
T Consensus 122 ~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s 200 (384)
T 1eg5_A 122 DSRGVVKLEELEKLVDE-DTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFS 200 (384)
T ss_dssp CTTSCBCHHHHHHHCCT-TEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEE
T ss_pred CCCCccCHHHHHHHhCC-CCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEec
Confidence 479999999987 4999999999999999999999999999999 99999999763211 11123478999999
Q ss_pred CcccCCccccceeEEEEeCHHH--HHHHHHH---hHhhCCCccHHHHHHHHHhhHH----HHHHHHHHHHHHHHHHHHHH
Q 013019 355 ATKFIGGHNDVLAGSISGSGKL--VTQIRNL---HHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAEILE 425 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~el--i~~lr~~---~~~~G~~ls~~~a~l~lrgL~t----l~~Rl~~~~~nA~~Lae~L~ 425 (451)
+||+++.+| .|++++++++ ...+... ........+......+...++. +....++..++++.+.+.|+
T Consensus 201 ~sK~~g~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~ 277 (384)
T 1eg5_A 201 AHKFHGPKG---VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLM 277 (384)
T ss_dssp GGGGTSCTT---CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCc---eEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhC
Confidence 999987665 5898888765 2111110 0112224455544444444433 34556677788899999998
Q ss_pred cCCCeE
Q 013019 426 AHPKVL 431 (451)
Q Consensus 426 ~~p~V~ 431 (451)
+ ++++
T Consensus 278 ~-~g~~ 282 (384)
T 1eg5_A 278 N-LGAH 282 (384)
T ss_dssp T-TTCE
T ss_pred C-CCeE
Confidence 7 5664
No 86
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.88 E-value=7.5e-21 Score=194.07 Aligned_cols=210 Identities=14% Similarity=0.193 Sum_probs=156.2
Q ss_pred HHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 212 TVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 212 ~~~Lee~LA~l~----ga----e-~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
...|++++++++ |. + +.+++++|++|+..++.+++++||+|+++++.|.+.... +...|.++..++.
T Consensus 64 ~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~----~~~~g~~~~~v~~ 139 (411)
T 2o0r_A 64 SAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPV----VAMAGAHRVTVPL 139 (411)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHH----HHHcCCEEEEeec
Confidence 456777777664 52 3 566667777999999999999999999999999986643 3456777666543
Q ss_pred --------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc-------cccc
Q 013019 283 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-------QKAL 344 (451)
Q Consensus 283 --------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~-------~~pl 344 (451)
.|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.... ...+
T Consensus 140 ~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 218 (411)
T 2o0r_A 140 VPDGRGFALDADALRRAVTP-RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGF 218 (411)
T ss_dssp EEETTEEECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGS
T ss_pred cccccCCCCCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhc
Confidence 589999999986 4999999999999999976 58999999999999999999875321 1111
Q ss_pred --cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH----HHHHHHHHHHHHHH
Q 013019 345 --SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTAL 418 (451)
Q Consensus 345 --~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~----tl~~Rl~~~~~nA~ 418 (451)
..+.|+++.|++|.++.+| .++|+++++++++++++......+...++.....+...|+ .+....++..++.+
T Consensus 219 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 297 (411)
T 2o0r_A 219 DGMAERTITISSAAKMFNCTG-WKIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRD 297 (411)
T ss_dssp TTTGGGEEEEEEHHHHTTCTT-TCEEEEECCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeechhhcCCcc-ceEEEEeeCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 1367999999999998666 5789999999999988876654433333333333333332 34445566667788
Q ss_pred HHHHHHHcC
Q 013019 419 RMAEILEAH 427 (451)
Q Consensus 419 ~Lae~L~~~ 427 (451)
.+.+.|+++
T Consensus 298 ~l~~~L~~~ 306 (411)
T 2o0r_A 298 RLAAGLTEI 306 (411)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 888888775
No 87
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.88 E-value=2.8e-21 Score=190.79 Aligned_cols=211 Identities=15% Similarity=0.187 Sum_probs=159.4
Q ss_pred ccCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~gae-~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
+.+|+++...+|+++|++++|.+ +.+++++|+ +++..++.++ +||+|++++|.|.+... .++..|+++..++
T Consensus 45 ~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~~----~~~~~g~~~~~v~ 118 (337)
T 3p1t_A 45 INRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRA----RIAVSGLRHFEIG 118 (337)
T ss_dssp TTSCCTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHHH----HHTTSCCEEEEEC
T ss_pred hccCCCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHHH----HHHHcCCEEEEec
Confidence 55677889999999999999974 355555555 7888888776 89999999999998653 4556788888876
Q ss_pred C-----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc--cc-cCCCcEEEE
Q 013019 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--AL-SLGADLVLH 353 (451)
Q Consensus 282 ~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~--pl-~~GaDiVv~ 353 (451)
. .|+++|+++ . ++++|++++|+||||.+.++++|.++|+++++ +|+|++|....... .. ..+.++++.
T Consensus 119 ~~~~~~~d~~~l~~~--~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~ 194 (337)
T 3p1t_A 119 LTDDLLLDPNDLAQV--S-RDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFR 194 (337)
T ss_dssp BCTTSSBCHHHHTTC--C-TTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEE
T ss_pred CCCCCCCCHHHHHhh--c-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEe
Confidence 3 378888876 2 37999999999999999999999999999996 66699987432211 11 225679999
Q ss_pred CCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 354 S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrg---L~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
|+||.++.+| .++|+++++++++++++.....+ ..+......+... .+.+..++++..++.+.+.+.|+++
T Consensus 195 S~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 268 (337)
T 3p1t_A 195 SFSKSYGLAG-LRLGALFGPSELIAAMKRKQWFC--NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL 268 (337)
T ss_dssp ESSSTTCCTT-TCCEEEECCHHHHHHHHTTSCTT--CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCchhccCcc-hheEEEEeCHHHHHHHHhhcCCC--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999997555 46899999999999887654433 3344443333333 3445666777778888999999887
No 88
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.88 E-value=4.8e-21 Score=193.02 Aligned_cols=216 Identities=9% Similarity=0.014 Sum_probs=158.5
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-----
Q 013019 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----- 282 (451)
+....+++++++++|.+ ..+++++|++|+..++.+++++||+|+++++.|.+.. +...+...|.++..++.
T Consensus 42 ~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 119 (392)
T 2z9v_A 42 LLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKG--FGYWAKRYSPHLLEIEVPYNEA 119 (392)
T ss_dssp HHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEESSHHHHH--HHHHHHHHCSCEEEEECCTTSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHHcCCceEEeeCCCCCC
Confidence 34678999999999973 5666678889999999999999999999999998753 22344556777776653
Q ss_pred CCHHHHHHhhcC-CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc-ccccCCCcEEEECCcccCC
Q 013019 283 ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSATKFIG 360 (451)
Q Consensus 283 ~D~d~Le~ai~~-~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-~pl~~GaDiVv~S~SK~l~ 360 (451)
.|+++|++++++ .++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+... ....+++|+++.|+||+++
T Consensus 120 ~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~ 199 (392)
T 2z9v_A 120 IDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLG 199 (392)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTC
T ss_pred CCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCccccc
Confidence 489999999942 24899999999999999999999999999999999999998754221 2223578999999999776
Q ss_pred ccccceeEEEEeCHHHHHHHHHHh--------------------HhhCCCccHHHHHHHHHhhHH-----HHHHHHHHHH
Q 013019 361 GHNDVLAGSISGSGKLVTQIRNLH--------------------HVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNS 415 (451)
Q Consensus 361 G~gdv~gG~Iv~~~eli~~lr~~~--------------------~~~G~~ls~~~a~l~lrgL~t-----l~~Rl~~~~~ 415 (451)
|+. ..|+++++++++++++... .......+......+...++. +....++..+
T Consensus 200 ~~~--g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~ 277 (392)
T 2z9v_A 200 APP--GLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHAL 277 (392)
T ss_dssp CCS--CCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCC--ceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 543 1489999999888876421 011122333332222223332 3445667778
Q ss_pred HHHHHHHHHHcCCCe
Q 013019 416 TALRMAEILEAHPKV 430 (451)
Q Consensus 416 nA~~Lae~L~~~p~V 430 (451)
+++.+.+.|++. ++
T Consensus 278 ~~~~l~~~L~~~-g~ 291 (392)
T 2z9v_A 278 TAKAMRAGVTAM-GL 291 (392)
T ss_dssp HHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHHc-CC
Confidence 888888888876 44
No 89
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.88 E-value=2.1e-20 Score=192.03 Aligned_cols=212 Identities=18% Similarity=0.233 Sum_probs=169.4
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC-----
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~----- 283 (451)
.+...+|+++|++++|.++++++++|++|+..++.++. +||+|+++++.|.++... +...|.++.+++..
T Consensus 51 ~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~----~~~~G~~~~~v~~~~~~~~ 125 (424)
T 2po3_A 51 GPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAG-LTGEVIMPSMTFAATPHA----LRWIGLTPVFADIDPDTGN 125 (424)
T ss_dssp CHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHT-CCSEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTTSS
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcC-CCCEEEECCCccHHHHHH----HHHcCCEEEEEecCCCcCC
Confidence 37889999999999999989999999999999999875 789999999999987643 44568888887642
Q ss_pred -CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc--cccccCCCcEEEECCc--cc
Q 013019 284 -DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--QKALSLGADLVLHSAT--KF 358 (451)
Q Consensus 284 -D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~--~~pl~~GaDiVv~S~S--K~ 358 (451)
|+++|++++++ ++++|+++ ||+|.+.++++|.++|+++|+++|+|++++.+.. ..++....|+++.|++ |.
T Consensus 126 ~d~~~l~~~i~~-~~~~v~~~---~~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~ 201 (424)
T 2po3_A 126 LDPDQVAAAVTP-RTSAVVGV---HLWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKA 201 (424)
T ss_dssp BCHHHHGGGCCT-TEEEEEEE---CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred cCHHHHHHhhCc-CCcEEEEE---CCCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCC
Confidence 79999999987 49999984 5899999999999999999999999999885332 2233323689999998 88
Q ss_pred CCccccceeEEEEeC-HHHHHHHHHHhHhh----------C--CCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 013019 359 IGGHNDVLAGSISGS-GKLVTQIRNLHHVL----------G--GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILE 425 (451)
Q Consensus 359 l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~----------G--~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~ 425 (451)
+++. ++|+++++ ++++++++...... | ..+++..+.+.+..++.+....++..++++.+.+.|+
T Consensus 202 l~~~---~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 278 (424)
T 2po3_A 202 VNAF---EGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAFPEVIDRNRRNHAAYREHLA 278 (424)
T ss_dssp SCCS---SCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCC---CCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8773 58999998 78888887654321 1 1345677777777777777777888888889999998
Q ss_pred cCCCeEE
Q 013019 426 AHPKVLL 432 (451)
Q Consensus 426 ~~p~V~~ 432 (451)
+.|++..
T Consensus 279 ~~~g~~~ 285 (424)
T 2po3_A 279 DLPGVLV 285 (424)
T ss_dssp SCTTEEE
T ss_pred cCCCccc
Confidence 8887654
No 90
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.88 E-value=1e-20 Score=193.90 Aligned_cols=210 Identities=16% Similarity=0.189 Sum_probs=157.6
Q ss_pred HHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-
Q 013019 212 TVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (451)
Q Consensus 212 ~~~Lee~LA~l~----ga----e-~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd- 281 (451)
...|++++++++ |. + +.+++++|++|+.+++.+++++||+|+++.+.|.+....+ ...|.++..++
T Consensus 79 ~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~ 154 (429)
T 1yiz_A 79 HPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMV----KAAGGIPRFIPL 154 (429)
T ss_dssp CHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEEeC
Confidence 456777777664 52 4 5666666679999999999999999999999999866443 44577766553
Q ss_pred --------------CCCHHHHHHhhcCCCeEEEEEeCCCCCccccc---cHHHHHHHHHhcCCEEEEecCCCCCCc----
Q 013019 282 --------------PADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN---- 340 (451)
Q Consensus 282 --------------~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~---DL~~IaelA~~~g~~lVVD~tfa~~~~---- 340 (451)
..|+++|++++++ ++++|++++|+||||.+. ++++|.++|+++|+++|+|++|.....
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~ 233 (429)
T 1yiz_A 155 KPNKTGGTISSADWVLDNNELEALFNE-KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFE 233 (429)
T ss_dssp BCCCSSSSEEGGGCBCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSC
T ss_pred CcccccccccccCcccCHHHHHHHhcc-CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCC
Confidence 2479999999976 499999999999999998 499999999999999999999874321
Q ss_pred ---cccc--cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH----------
Q 013019 341 ---QKAL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---------- 405 (451)
Q Consensus 341 ---~~pl--~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t---------- 405 (451)
...+ ..+.|+++.|+||.++++| .+.|++++++++++.++..........++..+..+...|+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 312 (429)
T 1yiz_A 234 HIRICTLPGMWERTITIGSAGKTFSLTG-WKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPEC 312 (429)
T ss_dssp CCCGGGSTTTGGGEEEEEEHHHHHTCGG-GCCEEEESCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTS
T ss_pred CcChhhccCCcCceEEEecchhccCCCC-cceEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHH
Confidence 1112 2467999999999998666 56899999999999888766544444555554444444443
Q ss_pred -HHHHHHHHHHHHHHHHHHHHcC
Q 013019 406 -LHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 406 -l~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+....++..++.+.+.+.|+++
T Consensus 313 ~~~~~~~~~~~~~~~l~~~L~~~ 335 (429)
T 1yiz_A 313 YFNSISGELMAKRDYMASFLAEV 335 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Confidence 3444555667788888888876
No 91
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.88 E-value=4.1e-21 Score=193.85 Aligned_cols=210 Identities=19% Similarity=0.230 Sum_probs=170.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
.++...+|+++|++++|.++++++++|++|+..++.++ +++||+|+++.+.|.++... +...|+++.+++.
T Consensus 37 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~ 112 (393)
T 1mdo_A 37 TGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNM----IVLLGANPVMVDVDRDT 112 (393)
T ss_dssp SSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHH----HHHTTCEEEEECBCTTT
T ss_pred CChHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHHHH----HHHCCCEEEEEeccCCc
Confidence 45888999999999999998999999999999999999 89999999999999987643 4457888887763
Q ss_pred --CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCC-CcEEEECCc--c
Q 013019 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG-ADLVLHSAT--K 357 (451)
Q Consensus 283 --~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~G-aDiVv~S~S--K 357 (451)
.|+++|++++++ ++++|+++ ||+|.+.|+++|.++|+++|+++|+|++++.+.......+| .|+++.|++ |
T Consensus 113 ~~~d~~~l~~~l~~-~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K 188 (393)
T 1mdo_A 113 LMVTPEHIEAAITP-QTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIK 188 (393)
T ss_dssp CCBCHHHHHHHCCT-TEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTS
T ss_pred CCCCHHHHHHhcCC-CceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCC
Confidence 479999999987 49999874 58999999999999999999999999999865322222345 899999999 9
Q ss_pred cCCccccceeEEEEeC-HHHHHHHHHHhHhh----------------------C--CCccHHHHHHHHHhhHHHHHHHHH
Q 013019 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHVL----------------------G--GALNPNAAYLIIRGMKTLHLRVQQ 412 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~----------------------G--~~ls~~~a~l~lrgL~tl~~Rl~~ 412 (451)
++++. ++|+++++ ++++++++...... | ..+++..+.+.+..++.+....++
T Consensus 189 ~l~~~---~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~ 265 (393)
T 1mdo_A 189 NITCA---EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNAR 265 (393)
T ss_dssp SSCSS---SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHHHHH
T ss_pred ccccc---cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99764 48999886 78888887654311 1 124667777666777777777888
Q ss_pred HHHHHHHHHHHHHcCC
Q 013019 413 QNSTALRMAEILEAHP 428 (451)
Q Consensus 413 ~~~nA~~Lae~L~~~p 428 (451)
..++++.+.+.|++.+
T Consensus 266 ~~~~~~~l~~~L~~~~ 281 (393)
T 1mdo_A 266 RAAIAAQYHQAMADLP 281 (393)
T ss_dssp HHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHhcCC
Confidence 8889999999999887
No 92
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.88 E-value=1.1e-21 Score=197.00 Aligned_cols=208 Identities=13% Similarity=0.085 Sum_probs=155.0
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHHccC--CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 212 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 212 ~~~Lee~LA~l~----ga----e~~vv~sSG~aAi~~al~all~~--GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
..+|++.+++++ |. ++.+++++|++|+..++.+++++ ||+|+++.+.|.+.... +...|.++..++
T Consensus 61 ~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~ 136 (376)
T 3ezs_A 61 EESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGA----AKFIKAKSLLMP 136 (376)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHH----HHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHH----HHHcCCEEEEcc
Confidence 345666666654 63 56777888889999999999999 99999999999986543 455688887776
Q ss_pred CCCHH----HHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----ccc------
Q 013019 282 PADME----GLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL------ 344 (451)
Q Consensus 282 ~~D~d----~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~pl------ 344 (451)
..+.+ +|++++.+ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... ..+
T Consensus 137 ~~~~~~~~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 215 (376)
T 3ezs_A 137 LTKENDFTPSLNEKELQ-EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLA 215 (376)
T ss_dssp CCGGGTSCCCCCHHHHH-HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHT
T ss_pred cCCCCCcchhHHhhhcc-CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccc
Confidence 43211 56666665 4899999999999999987 677888899999999999998753221 111
Q ss_pred ---cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH---HHHHHHHHHHHHHH
Q 013019 345 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTAL 418 (451)
Q Consensus 345 ---~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~---tl~~Rl~~~~~nA~ 418 (451)
..+.++++.|+||.++.+| .+.|+++++++++++++......+...++..+..+...++ .+..+.++..++.+
T Consensus 216 ~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 294 (376)
T 3ezs_A 216 GNEAFKNVLVIHSLSKRSSAPG-LRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLK 294 (376)
T ss_dssp TCTTCTTEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHH
T ss_pred cccccCcEEEEecchhccCCcc-ceeEEEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 3567899999999997665 5689999999999999887766566667776665554443 34455566667777
Q ss_pred HHHHHHH
Q 013019 419 RMAEILE 425 (451)
Q Consensus 419 ~Lae~L~ 425 (451)
.+.+.|+
T Consensus 295 ~l~~~l~ 301 (376)
T 3ezs_A 295 LARKIFK 301 (376)
T ss_dssp HHHHHST
T ss_pred HHHHHhc
Confidence 7777775
No 93
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.88 E-value=2e-20 Score=189.15 Aligned_cols=213 Identities=16% Similarity=0.100 Sum_probs=156.8
Q ss_pred HHH-HHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 212 TVV-VEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 212 ~~~-Lee~LA~l~----g----ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
... |++.|++++ | .++.+++++|++|+..++.+++++||+|+++.+.|.+....+ ...|.++..++.
T Consensus 65 ~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~v~~ 140 (390)
T 1d2f_A 65 KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAI----EGNQRTVMPVAL 140 (390)
T ss_dssp CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHH----HHTTCEEEEEEC
T ss_pred ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHH----HHCCCEEEEeec
Confidence 344 666666654 4 256777777789999999999999999999999999866443 455777666542
Q ss_pred --------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-----ccccC
Q 013019 283 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALSL 346 (451)
Q Consensus 283 --------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~-----~pl~~ 346 (451)
.|+++|++++++.++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+..... ....+
T Consensus 141 ~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 220 (390)
T 1d2f_A 141 EKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNV 220 (390)
T ss_dssp EECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGT
T ss_pred ccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHc
Confidence 58999999997645999999999999999987 899999999999999999998754211 11122
Q ss_pred C--C-cEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhH-hhC-CCccHHHHHHHHHhhH----HHHHHHHHHHHH
Q 013019 347 G--A-DLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHH-VLG-GALNPNAAYLIIRGMK----TLHLRVQQQNST 416 (451)
Q Consensus 347 G--a-DiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~-~~G-~~ls~~~a~l~lrgL~----tl~~Rl~~~~~n 416 (451)
. . |. +.|+||.++.+| +++|+++++ ++++++++.... ... ...++..++.+...++ .+....++..++
T Consensus 221 ~~~~~d~-~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 298 (390)
T 1d2f_A 221 ARGDWAL-LTSGSKSFNIPA-LTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDN 298 (390)
T ss_dssp CCSSEEE-EECSHHHHTCGG-GCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred chhhHhh-ccCccHhhcccC-hhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 2 2 77 999999998655 567888874 788888877655 333 2456665554444443 344455667778
Q ss_pred HHHHHHHHHc-CCCe
Q 013019 417 ALRMAEILEA-HPKV 430 (451)
Q Consensus 417 A~~Lae~L~~-~p~V 430 (451)
.+.+.+.|++ .|++
T Consensus 299 ~~~l~~~L~~~~~~~ 313 (390)
T 1d2f_A 299 LTYIADKMNAAFPEL 313 (390)
T ss_dssp HHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHhhCCCC
Confidence 8888999988 6765
No 94
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.88 E-value=1.5e-20 Score=192.46 Aligned_cols=210 Identities=13% Similarity=0.165 Sum_probs=167.8
Q ss_pred HHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC------C
Q 013019 212 TVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA------D 284 (451)
Q Consensus 212 ~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~------D 284 (451)
.+++++++++++|.++.+++++|++|+..++.++ +++||+|+++.+.|.++... +...|.++.+++.. |
T Consensus 44 ~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~d 119 (418)
T 2c81_A 44 ERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATA----VLNVNALPVFVDVEADTYCID 119 (418)
T ss_dssp HHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTTCSBC
T ss_pred HHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHHH----HHHcCCEEEEEecCCCCCCcC
Confidence 8899999999999988999999999999999999 89999999999999987644 34568888877642 7
Q ss_pred HHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc--cccccCCCcEEEECC--cccCC
Q 013019 285 MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--QKALSLGADLVLHSA--TKFIG 360 (451)
Q Consensus 285 ~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~--~~pl~~GaDiVv~S~--SK~l~ 360 (451)
+++|++++++ ++++|++ +||+|.+.|+++|.++|+++|++||+|++++.+.. ..++....|+++.|+ +|+++
T Consensus 120 ~~~l~~~i~~-~~~~v~~---~~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~~ 195 (418)
T 2c81_A 120 PQLIKSAITD-KTKAIIP---VHLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLT 195 (418)
T ss_dssp HHHHGGGCCT-TEEEECC---BCCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSC
T ss_pred HHHHHHhhCC-CCeEEEE---eCCcCCcccHHHHHHHHHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcccC
Confidence 9999999987 4999986 56899999999999999999999999999887641 222222247888888 99998
Q ss_pred ccccceeEEEEe-CHHHHHHHHHHhHhh--------------C------------CCccHHHHHHHHHhhHHHHHHHHHH
Q 013019 361 GHNDVLAGSISG-SGKLVTQIRNLHHVL--------------G------------GALNPNAAYLIIRGMKTLHLRVQQQ 413 (451)
Q Consensus 361 G~gdv~gG~Iv~-~~eli~~lr~~~~~~--------------G------------~~ls~~~a~l~lrgL~tl~~Rl~~~ 413 (451)
+ + ++|++++ +++++++++..+... . ..+.+..+.+.+..++.+..+.++.
T Consensus 196 ~-g--~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~ 272 (418)
T 2c81_A 196 A-G--EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQELDDKNAIR 272 (418)
T ss_dssp S-S--SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTHHHHHHHH
T ss_pred C-C--CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 8 5 5899998 478888877644220 0 0134556666666777777788888
Q ss_pred HHHHHHHHHHHHcCCCeEE
Q 013019 414 NSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 414 ~~nA~~Lae~L~~~p~V~~ 432 (451)
.++++.+.+.|++.|+++.
T Consensus 273 ~~~~~~l~~~L~~~~g~~~ 291 (418)
T 2c81_A 273 EKNAMFLNDALSKIDGIKV 291 (418)
T ss_dssp HHHHHHHHHHHTTSTTEEE
T ss_pred HHHHHHHHHHhccCCCccc
Confidence 8899999999998888754
No 95
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.87 E-value=4.1e-21 Score=193.25 Aligned_cols=219 Identities=14% Similarity=0.134 Sum_probs=163.4
Q ss_pred CCCchhHHHHHHHHHhh------hCC--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEE
Q 013019 206 RYGNPTTVVVEEKMSAL------EGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l------~ga--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v 277 (451)
+|+++...+|+++++++ .+. +..+++++|++++..++.+++++||+|+++++.|.+... .+...|.++
T Consensus 65 ~y~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~~gd~Vl~~~~~y~~~~~----~~~~~g~~~ 140 (369)
T 3cq5_A 65 RYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPI----LAKGTHTEF 140 (369)
T ss_dssp SCCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCSTTCEEEEEESSCTHHHH----HHHHTTCEE
T ss_pred cCCCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcCCCCEEEEcCCChHHHHH----HHHHcCCEE
Confidence 34444446888888888 343 344444455589999999999999999999999988654 344567777
Q ss_pred EEeC-----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccc----cCC
Q 013019 278 TVID-----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKAL----SLG 347 (451)
Q Consensus 278 ~~vd-----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl----~~G 347 (451)
..++ ..|+++|++++++.++++|++++|+||||.+.++++|.++++.+++++|+|++|+.+.. ...+ ..+
T Consensus 141 ~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 220 (369)
T 3cq5_A 141 IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYP 220 (369)
T ss_dssp EEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCT
T ss_pred EEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCC
Confidence 7664 24789999999762389999999999999999999999999999999999999865432 1112 235
Q ss_pred -CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH
Q 013019 348 -ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEI 423 (451)
Q Consensus 348 -aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~---tl~~Rl~~~~~nA~~Lae~ 423 (451)
.++++.|+||+++.+| .++|+++++++++++++.....++ .++..++.+...++ .+..+.++..++++.+.+.
T Consensus 221 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 297 (369)
T 3cq5_A 221 TKLVVSRTMSKAFDFAG-GRLGYFVANPAFIDAVMLVRLPYH--LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAAR 297 (369)
T ss_dssp TTEEEEEESSSTTSCGG-GCCEEEEECTHHHHHHHTTSCTTC--SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCEEEEEechHhcCCcc-cceEEEEeCHHHHHHHHHcCCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 6799999999998665 568999999999888876554443 55666555544444 4555667777888889998
Q ss_pred HHcCCCeEE
Q 013019 424 LEAHPKVLL 432 (451)
Q Consensus 424 L~~~p~V~~ 432 (451)
|++. ++..
T Consensus 298 L~~~-g~~~ 305 (369)
T 3cq5_A 298 LEEL-GYAV 305 (369)
T ss_dssp HHHH-TCEE
T ss_pred HHhC-CCEE
Confidence 9873 4543
No 96
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.87 E-value=2.5e-20 Score=191.68 Aligned_cols=217 Identities=11% Similarity=0.108 Sum_probs=157.5
Q ss_pred hHHHHHHHHHhhhCCC----------cEEEeC-CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEE
Q 013019 211 TTVVVEEKMSALEGAE----------STVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (451)
Q Consensus 211 t~~~Lee~LA~l~gae----------~~vv~s-SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~ 279 (451)
.++++.+.+++.+|.+ +.++++ +|++|+..++.+++++||+|++++|.|.+... .+...|.++..
T Consensus 83 lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~ 158 (425)
T 2r2n_A 83 LLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQ----SLHPLGCNIIN 158 (425)
T ss_dssp HHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH----HHGGGTCEEEE
T ss_pred HHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH----HHHHcCCEEEE
Confidence 3555666666656642 355554 55699999999999999999999999998654 34556887777
Q ss_pred eCC----CCHHHHHHhhcC-----------CCeEEEEE-eCCCCCccccccHH---HHHHHHHhcCCEEEEecCCCCCCc
Q 013019 280 IDP----ADMEGLEAALNN-----------NNVSLFFT-ESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLN 340 (451)
Q Consensus 280 vd~----~D~d~Le~ai~~-----------~~tklV~l-esPsNPtG~v~DL~---~IaelA~~~g~~lVVD~tfa~~~~ 340 (451)
++. .|+++|++++++ .++++|++ ++|+||||.+.+.+ +|.++|+++|++||+|++|+....
T Consensus 159 v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~ 238 (425)
T 2r2n_A 159 VASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQF 238 (425)
T ss_dssp ECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBS
T ss_pred eCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccC
Confidence 653 478999998862 24888876 68999999999754 999999999999999999863211
Q ss_pred -------ccccc-CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH-------
Q 013019 341 -------QKALS-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------- 405 (451)
Q Consensus 341 -------~~pl~-~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t------- 405 (451)
...++ .+.++++.|+||+++ +| ++.|+++++++++++++..+.....+.++..++.+...|+.
T Consensus 239 ~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~G-lRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~ 316 (425)
T 2r2n_A 239 NKFRVPTFLSMDVDGRVIRADSFSKIIS-SG-LRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFM 316 (425)
T ss_dssp SSSCCCCTGGGCTTSCEEEEEESTTTTC-ST-TCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccccCCCCCEEEEccchhhcc-Cc-cceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHH
Confidence 11111 245699999999997 55 67899999999999988877665556677766655555543
Q ss_pred --HHHHHHHHHHHHHHHHHHHHc-CCCeEEE
Q 013019 406 --LHLRVQQQNSTALRMAEILEA-HPKVLLL 433 (451)
Q Consensus 406 --l~~Rl~~~~~nA~~Lae~L~~-~p~V~~V 433 (451)
+....++..++.+.+.+.|++ .|++..+
T Consensus 317 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 347 (425)
T 2r2n_A 317 AHVDRVIDFYSNQKDAILAAADKWLTGLAEW 347 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEE
Confidence 233345556777888888887 4665443
No 97
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.87 E-value=1.9e-20 Score=189.93 Aligned_cols=211 Identities=18% Similarity=0.123 Sum_probs=162.2
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d 286 (451)
.+...+|+++|++++|.++.+++++|+.++..++..+. .+||+|+++.+.|+++... +...|.++..++..|++
T Consensus 90 ~~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~d~~ 165 (401)
T 2bwn_A 90 TAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEG----IKRNAGPKRIFRHNDVA 165 (401)
T ss_dssp BHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHH----HHHSCCCEEEECTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcEEEECCcHHHHHHHHHHHhcCCCCCEEEECchhhHHHHHH----HHHcCCeEEEEcCCCHH
Confidence 46788999999999999899999999998777776654 4899999999999887643 34568888888888899
Q ss_pred HHHHhhcC---CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccc-------ccc--CCCcEEEEC
Q 013019 287 GLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-------ALS--LGADLVLHS 354 (451)
Q Consensus 287 ~Le~ai~~---~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~-------pl~--~GaDiVv~S 354 (451)
+|+++++. .++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.... ... .+.|+++.|
T Consensus 166 ~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s 245 (401)
T 2bwn_A 166 HLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGT 245 (401)
T ss_dssp HHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEE
T ss_pred HHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEee
Confidence 99988861 248999999999999999999999999999999999999987432210 011 135899999
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHHhHh--hCCCccHHHHHHHHHhhHHH-----HHHHHHHHHHHHHHHHHHHcC
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--~G~~ls~~~a~l~lrgL~tl-----~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
++|.++++ ||++++++++++.++..... +....++..+..+...++.+ ....++..++++.+.+.|++.
T Consensus 246 ~sK~~~~~----GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (401)
T 2bwn_A 246 LAKAYGVF----GGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL 321 (401)
T ss_dssp SSSTTCSC----CEEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhccCC----CCEEecCHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC
Confidence 99999976 48999999988887754322 22233444444444444433 445667778888888888875
No 98
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.87 E-value=7.2e-21 Score=190.32 Aligned_cols=213 Identities=19% Similarity=0.218 Sum_probs=168.6
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH---ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC--
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al---l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-- 282 (451)
+.+...+|+++|++++|.++++++++|++|+..++.++ +++||+|+++.+.|.++...+ ...|+++.+++.
T Consensus 30 ~~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~ 105 (375)
T 2fnu_A 30 QGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANML----LESGYTPVFAGIKN 105 (375)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHH----HHTTCEEEECCBCT
T ss_pred CChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHH----HHCCCEEEEeccCC
Confidence 36788899999999999988888999999999999999 899999999999999876543 346888888764
Q ss_pred ---CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCC--CcEEEECCc-
Q 013019 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT- 356 (451)
Q Consensus 283 ---~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~G--aDiVv~S~S- 356 (451)
.|+++|++++++ ++++|++++| +|.+.|+++|.++|+++|+++|+|++++.+........+ .|+++.|++
T Consensus 106 ~~~~d~~~l~~~i~~-~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~ 181 (375)
T 2fnu_A 106 DGNIDELALEKLINE-RTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHA 181 (375)
T ss_dssp TSSBCGGGSGGGCCT-TEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCT
T ss_pred CCCCCHHHHHhhcCc-CceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCC
Confidence 378899999987 4999888665 999999999999999999999999998765322211122 378888888
Q ss_pred -ccCCccccceeEEEEeC-HHHHHHHHHHhHhh--------------C--CCccHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 013019 357 -KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL--------------G--GALNPNAAYLIIRGMKTLHLRVQQQNSTAL 418 (451)
Q Consensus 357 -K~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~--------------G--~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~ 418 (451)
|++++ | .||+++.+ ++++++++...... + ..+.+..+.+.+..++.+..++++..++++
T Consensus 182 ~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 258 (375)
T 2fnu_A 182 IKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAAL 258 (375)
T ss_dssp TSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99976 5 46666654 77888887654211 1 145677666666667777888888899999
Q ss_pred HHHHHHHcCCCeE
Q 013019 419 RMAEILEAHPKVL 431 (451)
Q Consensus 419 ~Lae~L~~~p~V~ 431 (451)
.+.+.|++.|+++
T Consensus 259 ~l~~~L~~~~~~~ 271 (375)
T 2fnu_A 259 TYDRIFKDNPYFT 271 (375)
T ss_dssp HHHHHHTTCSSEE
T ss_pred HHHHHhhcCCCcc
Confidence 9999999988764
No 99
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.87 E-value=3.3e-21 Score=195.18 Aligned_cols=170 Identities=14% Similarity=0.136 Sum_probs=138.0
Q ss_pred hhHHHHHHHHHhhhCCC--c-EEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC---
Q 013019 210 PTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae--~-~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~--- 283 (451)
+...++++++++++|.+ . .++++||++|+..++.+++++||+|+++++.|.+.. +...+...|+++..++..
T Consensus 46 ~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 123 (411)
T 3nnk_A 46 HYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHL--LCEIARRCRAEVHTIEVPWGE 123 (411)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHH--HHHHHHHcCCeEEEEecCCCC
Confidence 44678999999999873 2 345567899999999999999999999999997632 224556678888877643
Q ss_pred --CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECCcccCC
Q 013019 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIG 360 (451)
Q Consensus 284 --D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~SK~l~ 360 (451)
|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......|+|+++.|++|+++
T Consensus 124 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~ 203 (411)
T 3nnk_A 124 VFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLG 203 (411)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTC
T ss_pred CCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccC
Confidence 899999999753489999999999999999999999999999999999999765422 22334579999999999866
Q ss_pred ccccceeEEEEeCHHHHHHHHHH
Q 013019 361 GHNDVLAGSISGSGKLVTQIRNL 383 (451)
Q Consensus 361 G~gdv~gG~Iv~~~eli~~lr~~ 383 (451)
++. .+|+++.+++++++++..
T Consensus 204 ~~~--g~g~~~~~~~~~~~~~~~ 224 (411)
T 3nnk_A 204 GPS--GTSPITLSARMEEAIRRR 224 (411)
T ss_dssp CCS--SEEEEEECHHHHHHHHTT
T ss_pred CCC--ceEEEEECHHHHHHHhhc
Confidence 554 379999999998888754
No 100
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=7.8e-21 Score=197.09 Aligned_cols=210 Identities=14% Similarity=0.165 Sum_probs=156.7
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC--
Q 013019 212 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-- 281 (451)
Q Consensus 212 ~~~Lee~LA~l~----ga----e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd-- 281 (451)
...|++.+++++ |. ++.+++++|++|+..++.+++++||+|++++|.|.+....+ ...|.++..++
T Consensus 97 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~ 172 (447)
T 3b46_A 97 RPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNI----ELCGGKVVYVPIN 172 (447)
T ss_dssp CHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHH----HHcCCEEEEEeCC
Confidence 456777777665 42 35666666679999999999999999999999999866443 44566655443
Q ss_pred ---------------CCCHHHHHHhhcCCCeEEEEEeCCCCCccccc---cHHHHHHHHHhcCCEEEEecCCCCCCc---
Q 013019 282 ---------------PADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (451)
Q Consensus 282 ---------------~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~---DL~~IaelA~~~g~~lVVD~tfa~~~~--- 340 (451)
..|+++|++++++ ++++|++++|+||||.+. ++++|+++|++||+++|+|++|.....
T Consensus 173 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~ 251 (447)
T 3b46_A 173 PPKELDQRNTRGEEWTIDFEQFEKAITS-KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS 251 (447)
T ss_dssp CCGGGGTSCBCSTTSEECHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC
T ss_pred CccccccccccccCcccCHHHHHHhhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCC
Confidence 2478999999986 499999999999999986 589999999999999999999875321
Q ss_pred ---cccc---cCCCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH------HH
Q 013019 341 ---QKAL---SLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LH 407 (451)
Q Consensus 341 ---~~pl---~~GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t------l~ 407 (451)
...+ ..+.++++.|+||+++.+| .+.|++++ ++++++.++........+.++...+.+...|+. +.
T Consensus 252 ~~~~~~~~~~~~~~~i~i~S~sK~~~~~G-~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~ 330 (447)
T 3b46_A 252 FTRIATLSPEIGQLTLTVGSAGKSFAATG-WRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFE 330 (447)
T ss_dssp CCCGGGSCHHHHTTEEEEEEHHHHTTCTT-SCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CcCHHHcCCCCCCcEEEEecCchhcCCcc-hhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHH
Confidence 1111 2478999999999998666 46899999 999999888766544444555555444444443 33
Q ss_pred HHHHHHHHHHHHHHHHHHcC
Q 013019 408 LRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 408 ~Rl~~~~~nA~~Lae~L~~~ 427 (451)
...++..++.+.+.+.|+++
T Consensus 331 ~~~~~~~~~~~~l~~~L~~~ 350 (447)
T 3b46_A 331 KMRQEYINKFKIFTSIFDEL 350 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHC
Confidence 34556677788888888875
No 101
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.87 E-value=7.9e-21 Score=192.43 Aligned_cols=211 Identities=15% Similarity=0.185 Sum_probs=166.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC---
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~--- 283 (451)
.++...+|++.|++++|.+++++++||++|+..++.++ +++||+|+++.+.|.++... +...|.++.+++..
T Consensus 54 ~~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~ 129 (391)
T 3dr4_A 54 VGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANS----VTYCGATPVLVDNDPRT 129 (391)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTT
T ss_pred CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHHH----HHHCCCEEEEEecCccc
Confidence 46889999999999999999999999999999999999 99999999999999987643 34568888887643
Q ss_pred ---CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCC--CcEEEECCc--
Q 013019 284 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT-- 356 (451)
Q Consensus 284 ---D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~G--aDiVv~S~S-- 356 (451)
|+++|+++++++ +++|+ |+||||.+.|+++|.++|+++|+++|+|++++.+........+ .|+++.|++
T Consensus 130 ~~~d~~~l~~~~~~~-~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~ 205 (391)
T 3dr4_A 130 FNLDAAKLEALITPR-TKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGN 205 (391)
T ss_dssp CSBCGGGSGGGCCTT-EEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTT
T ss_pred cCcCHHHHHHhcCCC-ceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCC
Confidence 789999999874 89888 5789999999999999999999999999998865432222222 489999866
Q ss_pred ccCCccccceeEEEEeC-HHHHHHHHHHhHhh--------------CCCccHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 013019 357 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL--------------GGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMA 421 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~--------------G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~La 421 (451)
|++++ + .+|+++.+ +++.++++...... ...+.+..+.+.+..++.+....++..++++.+.
T Consensus 206 K~l~~-g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~ 282 (391)
T 3dr4_A 206 AIITT-G--EGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYE 282 (391)
T ss_dssp SSSCC-B--SCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CcCCc-C--CeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 3 37887765 45777776554211 1245666666666666667777788888899999
Q ss_pred HHHHcCCCe
Q 013019 422 EILEAHPKV 430 (451)
Q Consensus 422 e~L~~~p~V 430 (451)
+.|++. ++
T Consensus 283 ~~L~~~-g~ 290 (391)
T 3dr4_A 283 QKLARL-GN 290 (391)
T ss_dssp HHHGGG-TT
T ss_pred HHhhcC-Cc
Confidence 999887 44
No 102
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.87 E-value=1.2e-21 Score=196.16 Aligned_cols=215 Identities=12% Similarity=0.070 Sum_probs=158.1
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHccC-------------CCeEEEcCCCCcchHHHHHHhhhcCC
Q 013019 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPA-------------GGHIVTTTDCYRKTRIFIETVLPKMG 274 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all~~-------------GD~VIv~~~~Y~~t~~~l~~~l~~~G 274 (451)
...+++++++++++|.+ +.+++++|++|+..++.+++.+ ||+|+++++.|.++...+ ...|
T Consensus 69 ~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~----~~~g 144 (397)
T 3f9t_A 69 LLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGR----EMMD 144 (397)
T ss_dssp HHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHH----HHHT
T ss_pred HHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHH----HHcC
Confidence 44567899999999873 4577888899999999998876 999999999999866443 4458
Q ss_pred cEEEEeCCC-----CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc---cc----
Q 013019 275 ITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---QK---- 342 (451)
Q Consensus 275 i~v~~vd~~-----D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~---~~---- 342 (451)
+++..++.. |+++|++++++.++++|++++|+||+|.+.|+++|.++|++||+++|+|++|+.+.. ..
T Consensus 145 ~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~ 224 (397)
T 3f9t_A 145 LEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKK 224 (397)
T ss_dssp CEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCC
T ss_pred ceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhccccccc
Confidence 888888754 899999999872389999999999999999999999999999999999999864211 10
Q ss_pred -----cccC--CCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhh---------CCC--ccHHHHHHHHHh-
Q 013019 343 -----ALSL--GADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVL---------GGA--LNPNAAYLIIRG- 402 (451)
Q Consensus 343 -----pl~~--GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~---------G~~--ls~~~a~l~lrg- 402 (451)
+... ++|+++.|++|+++++. .+|+++. ++.+.+.++.....+ |.. .+....+.+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~s~~K~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 302 (397)
T 3f9t_A 225 KGVNYKFDFSLGVDSITIDPHKMGHCPI--PSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYL 302 (397)
T ss_dssp TTCCCCCSGGGTCSEEECCTTTTTCCCS--SCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHH
T ss_pred ccccccccccccCCeEEEccccccCCCC--CceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHH
Confidence 2222 78999999999996654 3455555 555554443222221 111 133444444433
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 013019 403 -MKTLHLRVQQQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 403 -L~tl~~Rl~~~~~nA~~Lae~L~~~p~V~ 431 (451)
...+..++++..++++.+.+.|+++ ++.
T Consensus 303 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 331 (397)
T 3f9t_A 303 GREGQRKIVNECMENTLYLYKKLKEN-NFK 331 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHC-CCE
Confidence 3445667778888999999999987 543
No 103
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.87 E-value=6.4e-21 Score=194.69 Aligned_cols=209 Identities=14% Similarity=0.186 Sum_probs=159.9
Q ss_pred HHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC
Q 013019 212 TVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (451)
Q Consensus 212 ~~~Lee~LA~l~g--------ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~ 283 (451)
...|+++++++++ .++.+++++|++|+..++.+++++||+|+++++.|.+.... +...|.++..++..
T Consensus 81 ~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~ 156 (409)
T 2gb3_A 81 IWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAF----AKIAGVKLIPVTRR 156 (409)
T ss_dssp CHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH----HHHHTCEEEEEECC
T ss_pred cHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHcCCEEEEeccC
Confidence 5678888887763 15677777888999999999999999999999999986643 34457777776543
Q ss_pred -----C-HHHHHHhhcCCCeEEEEEeCCCCCccccc---cHHHHHHHHHhcCCEEEEecCCCCCCc----ccccc--CCC
Q 013019 284 -----D-MEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN----QKALS--LGA 348 (451)
Q Consensus 284 -----D-~d~Le~ai~~~~tklV~lesPsNPtG~v~---DL~~IaelA~~~g~~lVVD~tfa~~~~----~~pl~--~Ga 348 (451)
+ +++|++++++ ++++|++++|+||||.+. ++++|.++|+++|+++|+|++|+.... ...+. .+.
T Consensus 157 ~~~~~~~~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~ 235 (409)
T 2gb3_A 157 MEEGFAIPQNLESFINE-RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDK 235 (409)
T ss_dssp GGGTSCCCTTGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTT
T ss_pred CCCCCccHHHHHHhhCc-CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCC
Confidence 2 6788888876 499999999999999986 589999999999999999999875422 11122 357
Q ss_pred cEEEECCcccCCccccceeEEEEeCH-HHHHHHHHHhHhhCCCccHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHH
Q 013019 349 DLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAEI 423 (451)
Q Consensus 349 DiVv~S~SK~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~~G~~ls~~~a~l~lrgL----~tl~~Rl~~~~~nA~~Lae~ 423 (451)
|+++.|++|+++.+| .++|++++++ +++++++....... ..++...+.+...| +.+....++..++.+.+.+.
T Consensus 236 ~i~~~s~sK~~g~~G-~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 313 (409)
T 2gb3_A 236 VVVIDSVSKKFSACG-ARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKK 313 (409)
T ss_dssp EEEEEESTTTTTCGG-GCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecchhccCCcc-ceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999997665 5689999988 89998887766554 55666555544444 23444456677788888888
Q ss_pred HHcC
Q 013019 424 LEAH 427 (451)
Q Consensus 424 L~~~ 427 (451)
|+++
T Consensus 314 L~~~ 317 (409)
T 2gb3_A 314 LEEH 317 (409)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 9876
No 104
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.87 E-value=6e-21 Score=192.39 Aligned_cols=220 Identities=15% Similarity=0.151 Sum_probs=160.9
Q ss_pred ccCCCchhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 204 YGRYGNPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~gae---~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
|+.+..+...++++++++++|.+ ..+++++|++|+..++.+++++||+|+++++.|.+.. +...++..|.++..+
T Consensus 46 ~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v 123 (393)
T 2huf_A 46 LHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDR--SADMATRYGADVRVV 123 (393)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHH--HHHHHHHcCCeeEEE
Confidence 33334466788999999999974 2445577889999999999999999999999998742 223445678888777
Q ss_pred CC-----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEEC
Q 013019 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (451)
Q Consensus 281 d~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S 354 (451)
+. .|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .....+++|+++.|
T Consensus 124 ~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s 203 (393)
T 2huf_A 124 KSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTG 203 (393)
T ss_dssp ECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECC
T ss_pred eCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEEC
Confidence 63 5899999999762389999999999999999999999999999999999999764321 11223578999999
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHHh----H-h---------hC---------CCccHHHHHHHHHhhHH-----H
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH----H-V---------LG---------GALNPNAAYLIIRGMKT-----L 406 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~----~-~---------~G---------~~ls~~~a~l~lrgL~t-----l 406 (451)
++|+++|+.. .|+++++++++++++... . . ++ ...+......+...++. +
T Consensus 204 ~sK~l~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 281 (393)
T 2huf_A 204 SQKVLGAPPG--ITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGL 281 (393)
T ss_dssp SSSTTCCCSS--CEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCH
T ss_pred CCcccccCCC--eEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCH
Confidence 9998765431 388999999988877531 1 1 11 12333332222223322 4
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 013019 407 HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 407 ~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
....++..++++.+.+.|++.
T Consensus 282 ~~~~~~~~~~~~~l~~~L~~~ 302 (393)
T 2huf_A 282 PALIARHEDCAKRLYRGLQDA 302 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 445677778889999999876
No 105
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.87 E-value=8.1e-21 Score=194.97 Aligned_cols=216 Identities=12% Similarity=0.074 Sum_probs=163.8
Q ss_pred CCCch-hHHHHHHHHHhhh-----CC--Cc---EEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhc-C
Q 013019 206 RYGNP-TTVVVEEKMSALE-----GA--ES---TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK-M 273 (451)
Q Consensus 206 R~~np-t~~~Lee~LA~l~-----ga--e~---~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~-~ 273 (451)
+|+.+ ....|++.|++++ +. ++ .+++++|++|+..++.+++++||+|++++|.|.+... .+.. .
T Consensus 83 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~~ 158 (430)
T 2x5f_A 83 PYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKL----VFNTRN 158 (430)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHH----HHTTTT
T ss_pred ccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHH----HHHHhc
Confidence 34444 3678999999988 64 45 5666666799999999999999999999999998653 3445 6
Q ss_pred CcEEEEeCC------CCHHHHHHhhcCC--CeEEEEEeCCCCCcccccc---HHHHHHHHHh-----cCCEEEEecCCCC
Q 013019 274 GITATVIDP------ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHK-----KGAIVCIDGTFAT 337 (451)
Q Consensus 274 Gi~v~~vd~------~D~d~Le~ai~~~--~tklV~lesPsNPtG~v~D---L~~IaelA~~-----~g~~lVVD~tfa~ 337 (451)
|.++..++. .|+++|++++++. ++++|++++|+||||.+.+ +++|.++|++ +|+++|+|++|..
T Consensus 159 g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~ 238 (430)
T 2x5f_A 159 GANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYG 238 (430)
T ss_dssp CCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTT
T ss_pred CCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhccc
Confidence 888777653 3689999998751 4899999999999999998 8899999999 9999999999875
Q ss_pred CCcc----cc----c-c-CCC---cEEEECCcccCCccccceeEEEEe---CHHHHHHHHHHhHh----hCCCccHHHHH
Q 013019 338 PLNQ----KA----L-S-LGA---DLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHV----LGGALNPNAAY 397 (451)
Q Consensus 338 ~~~~----~p----l-~-~Ga---DiVv~S~SK~l~G~gdv~gG~Iv~---~~eli~~lr~~~~~----~G~~ls~~~a~ 397 (451)
.... .+ + . .+. ++++.|+||.++.+| .+.|++++ +++++++++..... .....++..++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 317 (430)
T 2x5f_A 239 LFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWG-FRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQS 317 (430)
T ss_dssp CBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGG-GCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHH
T ss_pred ccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCC-CCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHH
Confidence 3211 12 1 1 345 688999999998666 46789999 99999988876554 34456677666
Q ss_pred HHHHhhH----HHHH---HHHHHHHHHHHHHHHHHc
Q 013019 398 LIIRGMK----TLHL---RVQQQNSTALRMAEILEA 426 (451)
Q Consensus 398 l~lrgL~----tl~~---Rl~~~~~nA~~Lae~L~~ 426 (451)
.+...|+ .+.. ..++..++.+.+.+.|++
T Consensus 318 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 353 (430)
T 2x5f_A 318 AVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYA 353 (430)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6655555 2333 556677788888888883
No 106
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.87 E-value=1.1e-20 Score=192.55 Aligned_cols=215 Identities=12% Similarity=0.092 Sum_probs=157.3
Q ss_pred hHHHHHHHHHhhhC--------------CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE
Q 013019 211 TTVVVEEKMSALEG--------------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (451)
Q Consensus 211 t~~~Lee~LA~l~g--------------ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~ 276 (451)
...+|+++++++++ .++.+++++|++|+..++.+++++||+|+++++.|.+.... +...|++
T Consensus 76 ~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~----~~~~g~~ 151 (416)
T 1bw0_A 76 GSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETV----CKAYGIG 151 (416)
T ss_dssp CCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH----HHHTTCE
T ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHH----HHHcCcE
Confidence 45678888888877 35667777777999999999999999999999999986543 4456777
Q ss_pred EEEeCC-------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc-cc---
Q 013019 277 ATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-QK--- 342 (451)
Q Consensus 277 v~~vd~-------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~-~~--- 342 (451)
+..++. .|+++|+++++++ +++|++++|+||||.+.+ +++|.++|+++|++||+|++|..... ..
T Consensus 152 ~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~ 230 (416)
T 1bw0_A 152 MHFYNCRPENDWEADLDEIRRLKDDK-TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPN 230 (416)
T ss_dssp EEEEEEEGGGTTEECHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTT
T ss_pred EEEeecCcccCCCCCHHHHHHHhccC-CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCC
Confidence 666542 3799999999874 899999999999999998 99999999999999999999875321 11
Q ss_pred ----cc-cC---CCcEEEECCcccCCccccceeEEEEeCH--HHHHHHH----HHhHhhCCCccHHHHHHHHHhhH----
Q 013019 343 ----AL-SL---GADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIR----NLHHVLGGALNPNAAYLIIRGMK---- 404 (451)
Q Consensus 343 ----pl-~~---GaDiVv~S~SK~l~G~gdv~gG~Iv~~~--eli~~lr----~~~~~~G~~ls~~~a~l~lrgL~---- 404 (451)
++ .+ +.++++.|+||.++++| .++|++++++ ++++++. ..... ....++..++.+...|+
T Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-lr~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~ 308 (416)
T 1bw0_A 231 ATFTSVADFETTVPRVILGGTAKNLVVPG-WRLGWLLYVDPHGNGPSFLEGLKRVGML-VCGPCTVVQAALGEALLNTPQ 308 (416)
T ss_dssp CCCCCTTSSCCSCCEEEEEESTTTTSCGG-GCCEEEEEECTTCSCHHHHHHHHHHHHH-HTCSCHHHHHHHHHHHHSSCH
T ss_pred CCccCHHHccCCCcEEEEecchhhCCCCC-ceEEEEEeeCchhhHHHHHHHHHHHhcc-ccCCCcHHHHHHHHHHhcccH
Confidence 11 11 23588899999998766 4678888755 3444333 22211 22345555554444443
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 013019 405 -TLHLRVQQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 405 -tl~~Rl~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
.+....++..++.+.+.+.|+++|++..
T Consensus 309 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 337 (416)
T 1bw0_A 309 EHLDQIVAKIEESAMYLYNHIGECIGLAP 337 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 3555667778889999999998887753
No 107
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.87 E-value=1.3e-20 Score=196.03 Aligned_cols=216 Identities=15% Similarity=0.123 Sum_probs=160.4
Q ss_pred hHHHHHHHHHhhh----CC---CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 211 TTVVVEEKMSALE----GA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 211 t~~~Lee~LA~l~----ga---e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
....|+++|++++ |. ++.+++++|++|+..++.+++++||+|+++.|.|.+....+ ...|.++..++.
T Consensus 119 g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~ 194 (448)
T 3aow_A 119 GFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAF----NFYEPQYIQIPLD 194 (448)
T ss_dssp CCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HTTCCEEEEEEEE
T ss_pred CcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHH----HHcCCEEEEeccC
Confidence 3567888888877 75 45666667779999999999999999999999999866443 446777666643
Q ss_pred ---CCHHHHHHhhc----C-CCeEEEE-EeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-c----ccc
Q 013019 283 ---ADMEGLEAALN----N-NNVSLFF-TESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-K----ALS 345 (451)
Q Consensus 283 ---~D~d~Le~ai~----~-~~tklV~-lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~-~----pl~ 345 (451)
.|+++|+++++ + .++++|+ +++|+||||.+.+ +++|.++|+++|++||+|++|...... . ...
T Consensus 195 ~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~ 274 (448)
T 3aow_A 195 DEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKA 274 (448)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGG
T ss_pred CCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHh
Confidence 47999999987 5 2589985 6899999999986 578999999999999999998754221 1 112
Q ss_pred ---CCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH------HHHHHHHHHHH
Q 013019 346 ---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNST 416 (451)
Q Consensus 346 ---~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t------l~~Rl~~~~~n 416 (451)
.+.++++.|+||.++ +| .++|+++++++++++++..........++..++.+...|+. +....++..++
T Consensus 275 ~~~~~~vi~~~S~SK~~~-~G-lriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 352 (448)
T 3aow_A 275 LDNEGRVIYLGTFSKILA-PG-FRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPR 352 (448)
T ss_dssp GCTTSCEEEEEESTTTTC-GG-GCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEccchhhcc-cc-ccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 256799999999998 55 67899999999999988766544334466655554444432 34445556677
Q ss_pred HHHHHHHHHc-CC-CeEE
Q 013019 417 ALRMAEILEA-HP-KVLL 432 (451)
Q Consensus 417 A~~Lae~L~~-~p-~V~~ 432 (451)
.+.+.+.|++ .| ++..
T Consensus 353 ~~~l~~~L~~~~~~g~~~ 370 (448)
T 3aow_A 353 RDAMLEALEEFMPEGVKW 370 (448)
T ss_dssp HHHHHHHHHHHCCTTCEE
T ss_pred HHHHHHHHHHhCCCCeEE
Confidence 8888888987 46 4643
No 108
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.87 E-value=3.1e-21 Score=195.83 Aligned_cols=216 Identities=14% Similarity=0.133 Sum_probs=160.2
Q ss_pred hHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----CC
Q 013019 211 TTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----AD 284 (451)
Q Consensus 211 t~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----~D 284 (451)
...+|+++|++++|. ++.+++++|++|+..++.+++++||+|+++.+.|.+.... +...|.++..++. .|
T Consensus 75 ~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~d 150 (397)
T 2zyj_A 75 GYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQA----FRLQGPRFLTVPAGEEGPD 150 (397)
T ss_dssp CCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHTTCCEEEEEEEETTEEC
T ss_pred CCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH----HHHcCCEEEecCcCCCCCC
Confidence 467899999999985 4455555666899999999999999999999999986643 3456777666543 37
Q ss_pred HHHHHHhhcCCCeEEE-EEeCCCCCccccccH---HHHHHHHHhcCCEEEEecCCCCCCc-----cccccC------CCc
Q 013019 285 MEGLEAALNNNNVSLF-FTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLN-----QKALSL------GAD 349 (451)
Q Consensus 285 ~d~Le~ai~~~~tklV-~lesPsNPtG~v~DL---~~IaelA~~~g~~lVVD~tfa~~~~-----~~pl~~------GaD 349 (451)
+++|++++++.++++| ++++|+||||.+.+. ++|.++|+++|+++|+|++|+.... .....+ +.+
T Consensus 151 ~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~ 230 (397)
T 2zyj_A 151 LDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGV 230 (397)
T ss_dssp HHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCE
T ss_pred HHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeE
Confidence 9999999975348888 479999999999875 5899999999999999999876432 111122 334
Q ss_pred EEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH-----HHHHHHHHHHHHHHHHHHHH
Q 013019 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 350 iVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~-----tl~~Rl~~~~~nA~~Lae~L 424 (451)
+++.|+||+++ +| .+.|+++++++++++++.....+....++..+..+...|+ .+....++..++.+.+.+.|
T Consensus 231 i~~~s~sK~~~-~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 308 (397)
T 2zyj_A 231 IYLGSFSKVLS-PG-LRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHAL 308 (397)
T ss_dssp EEEEESTTTTC-GG-GCCEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccccc-cc-ceeEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999998 54 5789999999999988876554433345665555544443 34444566677888888989
Q ss_pred Hc-CC-CeEE
Q 013019 425 EA-HP-KVLL 432 (451)
Q Consensus 425 ~~-~p-~V~~ 432 (451)
++ .| ++..
T Consensus 309 ~~~~~~g~~~ 318 (397)
T 2zyj_A 309 DREVPKEVRY 318 (397)
T ss_dssp HHHSCTTSEE
T ss_pred HHHCCCCeEE
Confidence 87 46 4543
No 109
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.87 E-value=1.4e-20 Score=193.20 Aligned_cols=218 Identities=14% Similarity=0.188 Sum_probs=159.5
Q ss_pred ccCCCchh-HHHHHHHHHhhhC--------C--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhc
Q 013019 204 YGRYGNPT-TVVVEEKMSALEG--------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK 272 (451)
Q Consensus 204 Y~R~~npt-~~~Lee~LA~l~g--------a--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~ 272 (451)
..+|+++. ..+|++.++++++ . +..+++++|++++..++.+++++||+|+++++.|.+.... ....
T Consensus 76 ~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~---~~~~ 152 (428)
T 1iay_A 76 IANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRD---LRWR 152 (428)
T ss_dssp HHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHH---TTTT
T ss_pred hcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHH---HHHh
Confidence 35566665 6789999999875 2 4455555555999999999999999999999999985432 2345
Q ss_pred CCcEEEEeCC-------CCHHHHHHhhcC-----CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCC
Q 013019 273 MGITATVIDP-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFAT 337 (451)
Q Consensus 273 ~Gi~v~~vd~-------~D~d~Le~ai~~-----~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~ 337 (451)
.|+++..++. .|+++|++++++ .++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..
T Consensus 153 ~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~ 232 (428)
T 1iay_A 153 TGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAA 232 (428)
T ss_dssp TCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGG
T ss_pred cCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccc
Confidence 6888877753 278999998863 24899999999999999999 99999999999999999999875
Q ss_pred CCcc-------ccccCC-------Cc--EEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCCccHHHHHHHH
Q 013019 338 PLNQ-------KALSLG-------AD--LVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLII 400 (451)
Q Consensus 338 ~~~~-------~pl~~G-------aD--iVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ls~~~a~l~l 400 (451)
.... ..+..+ .| +++.|+||.++.+| ++.|++++ +++++++++.....+ ..++..+..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G-lr~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~ 309 (428)
T 1iay_A 233 TVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG-FRVGIIYSFNDDVVNCARKMSSFG--LVSTQTQYFLA 309 (428)
T ss_dssp GCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG-GCEEEEEESCHHHHHHHHHHHTTS--CCCHHHHHHHH
T ss_pred cccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC-ceEEEEEeCCHHHHHHHHHHHhcc--cCCHHHHHHHH
Confidence 2211 111112 57 89999999998666 56788888 688888887655433 23455544444
Q ss_pred HhhHH-------HHHHHHHHHHHHHHHHHHHHcC
Q 013019 401 RGMKT-------LHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 401 rgL~t-------l~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
..++. +....++..++.+.+.+.|+++
T Consensus 310 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 343 (428)
T 1iay_A 310 AMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV 343 (428)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 43332 3344556677888888899876
No 110
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.86 E-value=9.8e-21 Score=194.50 Aligned_cols=211 Identities=14% Similarity=0.156 Sum_probs=157.5
Q ss_pred hHHHHHHHHHhhh----C---C--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 211 TTVVVEEKMSALE----G---A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 211 t~~~Lee~LA~l~----g---a--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
....|++.|++++ | . ++.+++++|++|+..++.+++++||+|+++.+.|.+.... +...|.++..++
T Consensus 86 g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~ 161 (425)
T 1vp4_A 86 GDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINA----FRQYLANFVVVP 161 (425)
T ss_dssp CCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHTTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH----HHHcCCEEEEec
Confidence 4567888888877 7 3 3455555566999999999999999999999999986643 344677776654
Q ss_pred C----CCHHHHHHhhcC-------CCeEEEE-EeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc-c---c
Q 013019 282 P----ADMEGLEAALNN-------NNVSLFF-TESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-Q---K 342 (451)
Q Consensus 282 ~----~D~d~Le~ai~~-------~~tklV~-lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~-~---~ 342 (451)
. .|+++|++++++ .++++|+ +++|+||||.+.+ +++|.++|+++|+++|+|++|+.... . .
T Consensus 162 ~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~ 241 (425)
T 1vp4_A 162 LEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVD 241 (425)
T ss_dssp EETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCC
T ss_pred cCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCc
Confidence 3 479999998865 2489984 7899999999986 67899999999999999999875422 1 1
Q ss_pred cc----cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH------HHHHHHH
Q 013019 343 AL----SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQ 412 (451)
Q Consensus 343 pl----~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t------l~~Rl~~ 412 (451)
++ ..+.++++.|+||+++ +| .++|+++++++++++++..........++..++.+...|+. +....++
T Consensus 242 ~~~~~~~~~~~i~~~s~sK~~~-~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 319 (425)
T 1vp4_A 242 PIFKIGGPERVVLLNTFSKVLA-PG-LRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIEL 319 (425)
T ss_dssp CHHHHHCTTTEEEEEESTTTTC-GG-GCEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHH
T ss_pred CHHHhCCCCCEEEEeccccccc-cc-cceEEEeeCHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 11 1256799999999998 55 57899999999999888766554444566666665555543 3334555
Q ss_pred HHHHHHHHHHHHHcC
Q 013019 413 QNSTALRMAEILEAH 427 (451)
Q Consensus 413 ~~~nA~~Lae~L~~~ 427 (451)
..++.+.+.+.|+++
T Consensus 320 ~~~~~~~l~~~L~~~ 334 (425)
T 1vp4_A 320 YRRKRTVMLNALEEY 334 (425)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 667788888888874
No 111
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.86 E-value=4.1e-21 Score=191.38 Aligned_cols=216 Identities=11% Similarity=0.122 Sum_probs=164.0
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC
Q 013019 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
+.+|+++...+|+++|++++|. ++.+++++|++|+..++.++. ||+|+++.+.|.+... .+...|.++..++
T Consensus 44 ~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~--gd~Vi~~~p~~~~~~~----~~~~~g~~~~~v~ 117 (350)
T 3fkd_A 44 IRHYPEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR--GSRSLIAIPSFAEYED----ACRMYEHEVCFYP 117 (350)
T ss_dssp GGSCCCTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT--TCEEEEEESCCHHHHH----HHHHTTCEEEEEE
T ss_pred HhcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC--CCEEEEeCCCcHHHHH----HHHHcCCeEEEEe
Confidence 4566676668999999999986 456666777799999998887 9999999999988663 3456788888887
Q ss_pred C-CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcC-CEEEEecCCCCCCccc-----cc-cCCCcEEEE
Q 013019 282 P-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-AIVCIDGTFATPLNQK-----AL-SLGADLVLH 353 (451)
Q Consensus 282 ~-~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g-~~lVVD~tfa~~~~~~-----pl-~~GaDiVv~ 353 (451)
. .+.+.+ ...++++|++++|+||||.+.++++|.++++.++ .++|+|++|....... .. ..+.++++.
T Consensus 118 ~~~~~~~~----~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (350)
T 3fkd_A 118 SNEDIGEA----DFSNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVY 193 (350)
T ss_dssp TTSCGGGS----CCTTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEE
T ss_pred cCCccccC----ccCCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEe
Confidence 6 432332 2235899999999999999999999999998876 7999999987532211 11 234569999
Q ss_pred CCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH---HHHHHHHHHHHHHHHHHHHHcCCCe
Q 013019 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEILEAHPKV 430 (451)
Q Consensus 354 S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t---l~~Rl~~~~~nA~~Lae~L~~~p~V 430 (451)
|+||.++.+| .++|+++++++++++++.....+ .+++..++.+...|+. +..+++++.++++.+.+.|+++|++
T Consensus 194 S~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 270 (350)
T 3fkd_A 194 SFSHAYGIPG-LRIGYIVANKDFMKRVAAFSTPW--AVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGV 270 (350)
T ss_dssp ESHHHHSCGG-GCCEEEECCHHHHHHHHTTCCTT--CSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTE
T ss_pred cCchhccCcc-hheEeEEeCHHHHHHHHHhCCCC--CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999998665 56899999999999888765443 4566666666655554 2345666668899999999999887
Q ss_pred EE
Q 013019 431 LL 432 (451)
Q Consensus 431 ~~ 432 (451)
..
T Consensus 271 ~~ 272 (350)
T 3fkd_A 271 EV 272 (350)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 112
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.86 E-value=1.1e-20 Score=187.02 Aligned_cols=213 Identities=10% Similarity=0.038 Sum_probs=155.5
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-----
Q 013019 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----- 282 (451)
+...++++++++++|.+ +.+++++|++|+..++.+++++||+|+++++.|.+.. +...+...|.++..++.
T Consensus 34 ~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 111 (352)
T 1iug_A 34 EVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSER--FYEIALEAGLVVERLDYPYGDT 111 (352)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCCC
Confidence 34678999999999975 5666678889999999999999999999999998865 22345567888877754
Q ss_pred CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc--CCEEEEecCCCCCCc-cccccCCCcEEEECCcccC
Q 013019 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (451)
Q Consensus 283 ~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~--g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~SK~l 359 (451)
.|+++|++ + ++++|++++|+||||.+.|+++|.++|+++ |+++|+|++++.+.. .....+++|+++.|+||++
T Consensus 112 ~d~~~l~~---~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~ 187 (352)
T 1iug_A 112 PRPEDVAK---E-GYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGL 187 (352)
T ss_dssp CCTTTSCC---S-SCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTT
T ss_pred CCHHHHhc---c-CCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccc
Confidence 35666655 3 489999999999999999999999999999 999999999864321 1112347899999999977
Q ss_pred CccccceeEEEEeCHHHHHH---------HHHHh-----HhhCCCccHHHHHHHHHhhHH----HHHHHHHHHHHHHHHH
Q 013019 360 GGHNDVLAGSISGSGKLVTQ---------IRNLH-----HVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMA 421 (451)
Q Consensus 360 ~G~gdv~gG~Iv~~~eli~~---------lr~~~-----~~~G~~ls~~~a~l~lrgL~t----l~~Rl~~~~~nA~~La 421 (451)
.++. ..|+++++++++++ ++... .......+......+...++. +....++..++++.+.
T Consensus 188 ~~~~--g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~ 265 (352)
T 1iug_A 188 MCPP--GLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLY 265 (352)
T ss_dssp CCCS--CEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHH
T ss_pred cCCC--ceeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6653 25888889887755 33111 111223444433333333332 4456677778899999
Q ss_pred HHHHcCCCeE
Q 013019 422 EILEAHPKVL 431 (451)
Q Consensus 422 e~L~~~p~V~ 431 (451)
+.|++. ++.
T Consensus 266 ~~L~~~-g~~ 274 (352)
T 1iug_A 266 GVGEEG-GLR 274 (352)
T ss_dssp HHHHHT-TCE
T ss_pred HHHHHC-CCc
Confidence 999887 553
No 113
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.86 E-value=8.6e-21 Score=190.39 Aligned_cols=215 Identities=13% Similarity=0.149 Sum_probs=160.4
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 209 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae---~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
.+...++++++++++|.+ ..+++++|++|+..++.+++++||+|+++.+.|.+.. +...+...|.++..++.
T Consensus 55 ~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~ 132 (393)
T 3kgw_A 55 LQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMR--AAEIADRIGARVHQMIKKPG 132 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCC
Confidence 355678999999999863 2456678889999999999999999999987775321 22445667888777652
Q ss_pred --CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEECCcccC
Q 013019 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFI 359 (451)
Q Consensus 283 --~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S~SK~l 359 (451)
.|+++|++++++.++++|++++|+||||.+.++++|.++|+++|+++|+|++++.+. .......++|+++.|+||++
T Consensus 133 ~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~ 212 (393)
T 3kgw_A 133 EHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVL 212 (393)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTT
T ss_pred CCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccc
Confidence 489999999986348999999999999999999999999999999999999987432 22223457899999999988
Q ss_pred CccccceeEEEEeCHHHHHHHHHHhH--------------hh---------CCCccHHHHHHHHHhhHH-----HHHHHH
Q 013019 360 GGHNDVLAGSISGSGKLVTQIRNLHH--------------VL---------GGALNPNAAYLIIRGMKT-----LHLRVQ 411 (451)
Q Consensus 360 ~G~gdv~gG~Iv~~~eli~~lr~~~~--------------~~---------G~~ls~~~a~l~lrgL~t-----l~~Rl~ 411 (451)
+|+. ..|+++++++++++++.... .+ ....+......+...++. +....+
T Consensus 213 ~~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 290 (393)
T 3kgw_A 213 NAPP--GISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWR 290 (393)
T ss_dssp CCCS--SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred cCCC--ceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 6553 27899999999888764321 11 123344433333333332 455567
Q ss_pred HHHHHHHHHHHHHHcC
Q 013019 412 QQNSTALRMAEILEAH 427 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~~ 427 (451)
+..++++.+.+.|+++
T Consensus 291 ~~~~~~~~l~~~L~~~ 306 (393)
T 3kgw_A 291 RHREATAHLHKHLQEM 306 (393)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 7788899999999887
No 114
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.86 E-value=1.2e-20 Score=191.63 Aligned_cols=214 Identities=17% Similarity=0.227 Sum_probs=158.7
Q ss_pred hHHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC
Q 013019 211 TTVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (451)
Q Consensus 211 t~~~Lee~LA~l~----g----ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~ 282 (451)
...+|++++++++ | .++.+++++|++|+..++.+++++||+|+++.++|.+.... +...|.++..++.
T Consensus 76 ~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~~ 151 (407)
T 2zc0_A 76 GIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLA----FEQLGAKIEGVPV 151 (407)
T ss_dssp CCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHTTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHH----HHHcCCEEEEccc
Confidence 4577888888887 7 24555666667999999999999999999999999886543 3456777766643
Q ss_pred ----CCHHHHHHhhc----C-CCeEEE-EEeCCCCCccccccHH---HHHHHHHhcCCEEEEecCCCCCCc-cc----cc
Q 013019 283 ----ADMEGLEAALN----N-NNVSLF-FTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLN-QK----AL 344 (451)
Q Consensus 283 ----~D~d~Le~ai~----~-~~tklV-~lesPsNPtG~v~DL~---~IaelA~~~g~~lVVD~tfa~~~~-~~----pl 344 (451)
.|+++|+++++ + .++++| ++++|+||||.+.+++ +|.++|+++|+++|+|++|+.... .. ..
T Consensus 152 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 231 (407)
T 2zc0_A 152 DNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLK 231 (407)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGG
T ss_pred CCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChh
Confidence 47999999987 5 248987 4789999999999876 999999999999999999875422 11 11
Q ss_pred cC---CCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH-------HHHHHHHHH
Q 013019 345 SL---GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-------LHLRVQQQN 414 (451)
Q Consensus 345 ~~---GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t-------l~~Rl~~~~ 414 (451)
.+ +.++++.|+||+++ +| .++|+++++++++++++......+...++.....+...++. +....++..
T Consensus 232 ~~~~~~~~i~~~s~sK~~~-~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 309 (407)
T 2zc0_A 232 ALDNEGRVIVAGTLSKVLG-TG-FRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYK 309 (407)
T ss_dssp GGCSSCCEEEEEESTTTTC-TT-SCCEEEECCHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHH
T ss_pred hcCCCCCEEEEcccccccC-CC-cceEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 22 45689999999998 54 56899999999999888776655444566655544444432 223345566
Q ss_pred HHHHHHHHHHHc-CCCe
Q 013019 415 STALRMAEILEA-HPKV 430 (451)
Q Consensus 415 ~nA~~Lae~L~~-~p~V 430 (451)
++.+.+.+.|++ .|++
T Consensus 310 ~~~~~l~~~L~~~~~~~ 326 (407)
T 2zc0_A 310 EKRDIMLKALENHLPNA 326 (407)
T ss_dssp HHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 778888888876 3554
No 115
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.86 E-value=1.2e-20 Score=191.39 Aligned_cols=219 Identities=14% Similarity=0.148 Sum_probs=164.7
Q ss_pred cccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc-------CC-CeEEEcCCCCcchHHHHHHh-----
Q 013019 203 EYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV----- 269 (451)
Q Consensus 203 ~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~-------~G-D~VIv~~~~Y~~t~~~l~~~----- 269 (451)
.+.++.++...+|+++|++++|.++++++++|++|+..++.+++. +| |+|++.++.|.+........
T Consensus 74 ~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~ 153 (406)
T 4adb_A 74 TGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPA 153 (406)
T ss_dssp CCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGG
T ss_pred ccCCcCCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCcc
Confidence 345677889999999999999999899999999999999988865 66 99999999998864322211
Q ss_pred ----hhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccc-----cHHHHHHHHHhcCCEEEEecCCCCC-C
Q 013019 270 ----LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKKGAIVCIDGTFATP-L 339 (451)
Q Consensus 270 ----l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~-----DL~~IaelA~~~g~~lVVD~tfa~~-~ 339 (451)
+...+..+..++..|+++|++++++ ++++|+++ |+||+|.+. ++++|.++|++||++||+|++++.. .
T Consensus 154 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~ 231 (406)
T 4adb_A 154 YSQDFAPLPADIRHAAYNDINSASALIDD-STCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGR 231 (406)
T ss_dssp GTGGGCSCCSSEEEECTTCHHHHHTTCST-TEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred ccccCCCCCCCceEeCCCcHHHHHHHhcC-CeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 1112245666777899999999986 49999998 999999765 6899999999999999999998632 1
Q ss_pred -----ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHH--HHHHHH
Q 013019 340 -----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLRVQQ 412 (451)
Q Consensus 340 -----~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl--~~Rl~~ 412 (451)
.........|++ ++||.++ +| .++|+++++++++++++..........++..+..+...++.+ ....++
T Consensus 232 ~g~~~~~~~~~~~~d~~--t~sK~~~-~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 307 (406)
T 4adb_A 232 TGELYAYMHYGVTPDLL--TTAKALG-GG-FPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNG 307 (406)
T ss_dssp TSSSSHHHHHTCCCSEE--EECGGGG-TT-SCCEEEEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHHH
T ss_pred cchhHHHHhcCCCCCEE--Eechhhc-CC-CCeEEEEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 112233456777 5799998 44 578999999998887765544344456777777766666654 444566
Q ss_pred HHHHHHHHHHHHHcC
Q 013019 413 QNSTALRMAEILEAH 427 (451)
Q Consensus 413 ~~~nA~~Lae~L~~~ 427 (451)
..++++.+.+.|++.
T Consensus 308 ~~~~~~~l~~~l~~~ 322 (406)
T 4adb_A 308 VKQRHDWFVERLNTI 322 (406)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 667777777777653
No 116
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.86 E-value=7.4e-21 Score=191.94 Aligned_cols=220 Identities=17% Similarity=0.166 Sum_probs=159.7
Q ss_pred ccCCCchhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 204 YGRYGNPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~gae---~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
|+.+..+...+|+++|++++|.+ +.+++++|++|+..++.+++++||+|+++++.|.+.. ....+...|+++..+
T Consensus 45 ~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v 122 (396)
T 2ch1_A 45 FHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAER--AVEMSERYGADVRTI 122 (396)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEE
T ss_pred CChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHH--HHHHHHHcCCceEEe
Confidence 43333345788999999999974 3455567789999999999999999999999998853 113456678888777
Q ss_pred CC-----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEEC
Q 013019 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (451)
Q Consensus 281 d~-----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S 354 (451)
+. .|+++|++++++.++++|++++|+||||.+.++++|.++|+++|+++|+|++|+.+.. .....+|+|+++.|
T Consensus 123 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s 202 (396)
T 2ch1_A 123 EGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTG 202 (396)
T ss_dssp ECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECC
T ss_pred cCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEc
Confidence 63 5899999999762389999999999999999999999999999999999999874321 11223578999999
Q ss_pred CcccCCccccceeEEEEeCHHHHHHHHHHh--------------HhhC---------CCccHHHHHHHHHhhHH-----H
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH--------------HVLG---------GALNPNAAYLIIRGMKT-----L 406 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~--------------~~~G---------~~ls~~~a~l~lrgL~t-----l 406 (451)
++|+++++. ..|+++.++++++.++... ..++ .+.+......+...++. +
T Consensus 203 ~~K~~~~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 280 (396)
T 2ch1_A 203 AQKVLGAPP--GITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGL 280 (396)
T ss_dssp CC-CCCCCS--SCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCH
T ss_pred CCccccCCC--CeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhH
Confidence 999887654 2489999998887765310 1111 22333333332233332 3
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 013019 407 HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 407 ~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
....++..++++.+.+.|+++
T Consensus 281 ~~~~~~~~~~~~~l~~~L~~~ 301 (396)
T 2ch1_A 281 ENQIKRRIECAQILYEGLGKM 301 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHC
Confidence 445667778888898888876
No 117
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.86 E-value=1.9e-20 Score=189.60 Aligned_cols=208 Identities=15% Similarity=0.194 Sum_probs=151.0
Q ss_pred HHHHHHHHhh----hC----CCcEEEeCCHHHHHHHHHHHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC
Q 013019 213 VVVEEKMSAL----EG----AESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (451)
Q Consensus 213 ~~Lee~LA~l----~g----ae~~vv~sSG~aAi~~al~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~ 283 (451)
..|++.++++ +| .++.+++++|++|+..++.+++++| |+|++++|.|.+.... +...|.++..++..
T Consensus 79 ~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~----~~~~g~~~~~v~~~ 154 (398)
T 3ele_A 79 VETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVF----VNAAGARLVEVPAD 154 (398)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHH----HHHTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHH----HHHcCCEEEEEecC
Confidence 4555555554 34 2567777778899999999999999 9999999999986643 44568888877643
Q ss_pred ------CHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHh------cCCEEEEecCCCCCCccc---c--
Q 013019 284 ------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK------KGAIVCIDGTFATPLNQK---A-- 343 (451)
Q Consensus 284 ------D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~------~g~~lVVD~tfa~~~~~~---p-- 343 (451)
|+++|+++++++ +++|++++|+||||.+.+ +++|+++|++ +|+++|+|++|+...... +
T Consensus 155 ~~~~~~d~~~l~~~l~~~-~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 233 (398)
T 3ele_A 155 TEHFQIDFDALEERINAH-TRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFV 233 (398)
T ss_dssp TTTSSCCHHHHHHTCCTT-EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCG
T ss_pred CcCCcCCHHHHHHHhCcC-CCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCCh
Confidence 899999999874 999999999999999987 6777899998 999999999987532210 1
Q ss_pred -ccCCCcEEEECCcccCCccccceeEEEEeCHHH------HHHHHHHhHhhC-CCccHHHHHHHHHhhHHHHHHHHHHHH
Q 013019 344 -LSLGADLVLHSATKFIGGHNDVLAGSISGSGKL------VTQIRNLHHVLG-GALNPNAAYLIIRGMKTLHLRVQQQNS 415 (451)
Q Consensus 344 -l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~el------i~~lr~~~~~~G-~~ls~~~a~l~lrgL~tl~~Rl~~~~~ 415 (451)
...+.++++.|+||.++.+| .+.|++++++++ .+.+.......+ ...+...++.+...++... ..++..+
T Consensus 234 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~ 311 (398)
T 3ele_A 234 TKYYDNTLVCYSYSKSLSLPG-ERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG-DINAYKE 311 (398)
T ss_dssp GGTCSSEEEEEESTTTSSCTT-TCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-CHHHHHH
T ss_pred HhhcCCeEEEEehhhcCCCcc-ceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-HHHHHHH
Confidence 12356799999999998666 578999988763 333443333332 3445565555554444322 3456667
Q ss_pred HHHHHHHHHHcC
Q 013019 416 TALRMAEILEAH 427 (451)
Q Consensus 416 nA~~Lae~L~~~ 427 (451)
+.+.+.+.|++.
T Consensus 312 ~~~~l~~~L~~~ 323 (398)
T 3ele_A 312 NRDLLYEGLTRI 323 (398)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 788888888765
No 118
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.86 E-value=1.9e-20 Score=185.75 Aligned_cols=213 Identities=11% Similarity=0.078 Sum_probs=156.0
Q ss_pred hhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 210 PTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
+..+++++++++++|. ++.+++++|++|+..++.+++++ +.+++..+.|+. . +...+...|+++.+++.
T Consensus 43 ~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~~~~~--~-~~~~~~~~g~~~~~v~~~~~~ 118 (362)
T 3ffr_A 43 EVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVEK-KSFHCVNGSFSK--R-FYEFAGELGREAYKEEAAFGK 118 (362)
T ss_dssp HHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECSHHHH--H-HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCcHHHH--H-HHHHHHHhCCCeEEEecCCCC
Confidence 4567889999999986 34666778889999999999988 555555555541 1 22345667888887753
Q ss_pred -CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc-CCEEEEecCCCCCCccccccCCCcEEEECCcccCC
Q 013019 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIG 360 (451)
Q Consensus 283 -~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~-g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~ 360 (451)
.|+++|+ +++ ++++|++++|+||||.+.|+++|.++|+++ |+++|+|++++.+.....+.. +|+++.|+||+++
T Consensus 119 ~~d~~~l~--~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~-~d~~~~s~~K~~~ 194 (362)
T 3ffr_A 119 GFYPADIT--VPA-DAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWTK-IDSVFFSVQKCFG 194 (362)
T ss_dssp CCCGGGCC--CCT-TCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTTS-CSEEEEETTSTTC
T ss_pred CCCHHHHh--ccC-CccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChhH-CcEEEEecccccC
Confidence 3778887 555 499999999999999999999999999999 999999999875532222222 8999999999999
Q ss_pred ccccceeEEEEeCHHHHHHHHHHhHh---------------------hCCCccHHHHHHHHHhhHH-----HHHHHHHHH
Q 013019 361 GHNDVLAGSISGSGKLVTQIRNLHHV---------------------LGGALNPNAAYLIIRGMKT-----LHLRVQQQN 414 (451)
Q Consensus 361 G~gdv~gG~Iv~~~eli~~lr~~~~~---------------------~G~~ls~~~a~l~lrgL~t-----l~~Rl~~~~ 414 (451)
++. .+|+++.+++++++++..... ...+.+....+.+...++. +..++++..
T Consensus 195 ~~~--G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 272 (362)
T 3ffr_A 195 LPA--GLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTE 272 (362)
T ss_dssp CCS--CCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CCC--ceEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 443 268888999988888765430 0223334333333333332 456678888
Q ss_pred HHHHHHHHHHHcCCCeEE
Q 013019 415 STALRMAEILEAHPKVLL 432 (451)
Q Consensus 415 ~nA~~Lae~L~~~p~V~~ 432 (451)
++++.+.+.|+++|+++.
T Consensus 273 ~~~~~l~~~L~~~~g~~~ 290 (362)
T 3ffr_A 273 EKAALINTYIESSKVFSF 290 (362)
T ss_dssp HHHHHHHHHHHHCSSEEE
T ss_pred HHHHHHHHHHHHccCcee
Confidence 999999999999988754
No 119
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.86 E-value=8.3e-20 Score=181.05 Aligned_cols=219 Identities=17% Similarity=0.168 Sum_probs=158.5
Q ss_pred CchhHHHHHHHHHhhhCCCc-EEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcC--CcEEEEeCCC-
Q 013019 208 GNPTTVVVEEKMSALEGAES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM--GITATVIDPA- 283 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~-~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~--Gi~v~~vd~~- 283 (451)
..+..+++++++++++|.+. .+++++|++|+..++.+++++||+|+++++.|+.++.. ..+... |.++..++..
T Consensus 41 ~~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 118 (356)
T 1v72_A 41 TDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDEC--GAPEFFSNGAKLMTVDGPA 118 (356)
T ss_dssp CSHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTSCCTTEEEEECTTSHHHHSST--THHHHHTTSCEEEECCCGG
T ss_pred cchHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHhcCCCCEEEEcCccchhhhhc--hHHHHHhCCcEEEEecCCC
Confidence 36788999999999999655 57778999999999999999999999999988775532 003334 7788777653
Q ss_pred ---CHHHHHH-hhcCC------CeEEEEEeCCCCCcccc---ccHHHHHHHHHhcCCEEEEecCCCCC------Cccccc
Q 013019 284 ---DMEGLEA-ALNNN------NVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATP------LNQKAL 344 (451)
Q Consensus 284 ---D~d~Le~-ai~~~------~tklV~lesPsNPtG~v---~DL~~IaelA~~~g~~lVVD~tfa~~------~~~~pl 344 (451)
|+++|++ ++++. ++++|++++|+| ||.+ .++++|.++|++||+++|+|++|..+ .....+
T Consensus 119 ~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 197 (356)
T 1v72_A 119 AKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM 197 (356)
T ss_dssp GCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT
T ss_pred CeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh
Confidence 7999999 88751 489999999987 9994 56889999999999999999997531 111111
Q ss_pred --cCCCcEEEECCcccCCcccccee-EEEEeCHHHHHHHHHHhHhhCCCcc--HHHHHHHHHhhHH--HHHHHHHHHHHH
Q 013019 345 --SLGADLVLHSATKFIGGHNDVLA-GSISGSGKLVTQIRNLHHVLGGALN--PNAAYLIIRGMKT--LHLRVQQQNSTA 417 (451)
Q Consensus 345 --~~GaDiVv~S~SK~l~G~gdv~g-G~Iv~~~eli~~lr~~~~~~G~~ls--~~~a~l~lrgL~t--l~~Rl~~~~~nA 417 (451)
..++|+++.|+||+ +++ .| |+++++++++++++..+...|.... ...+...++.++. +...+++..+++
T Consensus 198 ~~~~~~d~~~~s~sK~-g~~---~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 273 (356)
T 1v72_A 198 TWKAGVDALSFGATKN-GVL---AAEAIVLFNTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAA 273 (356)
T ss_dssp TGGGTCCEEEECCGGG-TCS---SCEEEEESSGGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHH
T ss_pred hhhhcCCEEEEecccC-CCc---CccEEEEECHHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 23689999999999 433 34 6888899998888766544443222 2222222333321 223456677888
Q ss_pred HHHHHHHHcCCCeEEE
Q 013019 418 LRMAEILEAHPKVLLL 433 (451)
Q Consensus 418 ~~Lae~L~~~p~V~~V 433 (451)
+.+.+.|++.++++.+
T Consensus 274 ~~l~~~L~~~~g~~~~ 289 (356)
T 1v72_A 274 QRLAQGLEGLGGVEVL 289 (356)
T ss_dssp HHHHHHHTTCTTEEEE
T ss_pred HHHHHHHhhCCCcEEc
Confidence 9999999888887543
No 120
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.86 E-value=1.5e-20 Score=188.58 Aligned_cols=219 Identities=13% Similarity=0.087 Sum_probs=161.2
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHH---Hc---cCC-CeEEEcCCCCcchHHHHHHhhh----cC
Q 013019 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLA---LV---PAG-GHIVTTTDCYRKTRIFIETVLP----KM 273 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~aAi~~al~a---ll---~~G-D~VIv~~~~Y~~t~~~l~~~l~----~~ 273 (451)
+|+++...+|+++|++++|. ++.+++++|++|+..++.+ +. ++| |+|++.++.|.+.......... ..
T Consensus 66 ~y~~~~~~~l~~~la~~~g~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~ 145 (375)
T 2eh6_A 66 LYENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHK 145 (375)
T ss_dssp TBCCHHHHHHHHHHHHTSSSCEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTT
T ss_pred ccCCHHHHHHHHHHHhhcCCCCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccC
Confidence 45677788999999999998 7788888899999998865 35 678 9999999998875433222111 11
Q ss_pred Cc-----EEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCC-Cccc-
Q 013019 274 GI-----TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LNQK- 342 (451)
Q Consensus 274 Gi-----~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~-~~~~- 342 (451)
+. .+..++..|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.. ....
T Consensus 146 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 224 (375)
T 2eh6_A 146 GFEPLVPGFSYAKLNDIDSVYKLLDE-ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEF 224 (375)
T ss_dssp TTCSCCSSEEEECTTCHHHHHTTCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS
T ss_pred CCCCCCCCceeCCCchHHHHHHHhcC-CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc
Confidence 22 2556666799999999986 4999999999999999988 999999999999999999998732 1111
Q ss_pred --cccCC--CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 013019 343 --ALSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTAL 418 (451)
Q Consensus 343 --pl~~G--aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~ 418 (451)
...+| .|++ |+||++++ + .+.|+++++++++++++..........++..+..+...|+.+....++..++++
T Consensus 225 ~~~~~~~~~~d~~--s~SK~~~~-g-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 300 (375)
T 2eh6_A 225 YAYQHFNLKPDVI--ALAKGLGG-G-VPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGN 300 (375)
T ss_dssp SGGGGGTCCCSEE--EECGGGGT-T-SCCEEEEEEHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCCCCEE--EEcccccC-C-CCeEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12335 7877 56699985 3 467888888887776654211122234677666666667766555667778888
Q ss_pred HHHHHHHcCCC
Q 013019 419 RMAEILEAHPK 429 (451)
Q Consensus 419 ~Lae~L~~~p~ 429 (451)
.+.+.|++.+.
T Consensus 301 ~l~~~L~~~~~ 311 (375)
T 2eh6_A 301 YFKEKLKELGK 311 (375)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHHhc
Confidence 89999987653
No 121
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.86 E-value=9.7e-20 Score=192.49 Aligned_cols=218 Identities=12% Similarity=0.129 Sum_probs=157.0
Q ss_pred hhHHHHHHHHHhhhC-----CCcEEEeCCHHHHHHHHHHHHccCCC----eEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 210 PTTVVVEEKMSALEG-----AESTVIMASGMSASTVMLLALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 210 pt~~~Lee~LA~l~g-----ae~~vv~sSG~aAi~~al~all~~GD----~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
+.++++.+.+.+..| .++.++++++++++..++.+++++|| +|+++.|.|...... +...|.++..+
T Consensus 133 ~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~----~~~~g~~~v~~ 208 (498)
T 3ihj_A 133 CIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAV----ISELDAIQVNY 208 (498)
T ss_dssp HHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHH----HHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHH----HHHcCCEEEEe
Confidence 345555555555553 25677777778999999999999875 999999999976543 34557776665
Q ss_pred CC-------CCHHHHHHhhcCC----CeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc----
Q 013019 281 DP-------ADMEGLEAALNNN----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---- 342 (451)
Q Consensus 281 d~-------~D~d~Le~ai~~~----~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~---- 342 (451)
+. .|+++|++++++. ++++|++++|+||||.+++ +++|+++|+++|++||+|++|.......
T Consensus 209 ~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~ 288 (498)
T 3ihj_A 209 YLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRF 288 (498)
T ss_dssp ECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCC
T ss_pred eccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCc
Confidence 43 3899999999752 3899999999999999975 6779999999999999999987643321
Q ss_pred -cc-----cCC-------CcEEEECCcccCCccccceeEEEE---eCHHHHHHHHHHhHhhCCCccHHHHHHHHHh----
Q 013019 343 -AL-----SLG-------ADLVLHSATKFIGGHNDVLAGSIS---GSGKLVTQIRNLHHVLGGALNPNAAYLIIRG---- 402 (451)
Q Consensus 343 -pl-----~~G-------aDiVv~S~SK~l~G~gdv~gG~Iv---~~~eli~~lr~~~~~~G~~ls~~~a~l~lrg---- 402 (451)
++ +++ ..++++|+||.+.|..+.++||++ .++++++.+...... ..+.+.....++...
T Consensus 289 ~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~q~a~~~~l~~~ 367 (498)
T 3ihj_A 289 HSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSV-RLCPPVSGQAAMDIVVNPP 367 (498)
T ss_dssp CCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHH-SCCCCHHHHHHHHHHTCCC
T ss_pred CCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhc-cCCCCHHHHHHHHHHhcCC
Confidence 11 011 137889999999542236789987 688999988877653 333444443333322
Q ss_pred ----------hHHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 013019 403 ----------MKTLHLRVQQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 403 ----------L~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
++.+..+.++..++++.+.+.|+++|++..
T Consensus 368 ~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~ 407 (498)
T 3ihj_A 368 VAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHC 407 (498)
T ss_dssp CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEe
Confidence 233445567778899999999999888754
No 122
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.85 E-value=1.2e-19 Score=191.76 Aligned_cols=215 Identities=14% Similarity=0.144 Sum_probs=156.7
Q ss_pred HHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHHc-cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-
Q 013019 212 TVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (451)
Q Consensus 212 ~~~Lee~LA~l~----g----ae~~vv~sSG~aAi~~al~all-~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd- 281 (451)
...|++.+++++ | .++.+++++|++|+..++.+++ ++||+|+++.|.|...... +...|.++..++
T Consensus 136 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~~ 211 (500)
T 3tcm_A 136 IHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSAS----IALHGGALVPYYL 211 (500)
T ss_dssp CHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHH----HHHTTCEEEEEEC
T ss_pred hHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHH----HHHcCCEEEEEec
Confidence 445666666654 3 3667778888899999999998 7999999999999976643 345577766654
Q ss_pred ------CCCHHHHHHhhcCC-----CeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-----c
Q 013019 282 ------PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----K 342 (451)
Q Consensus 282 ------~~D~d~Le~ai~~~-----~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~-----~ 342 (451)
..|+++|++++++. ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .
T Consensus 212 ~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~ 291 (500)
T 3tcm_A 212 NESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFH 291 (500)
T ss_dssp BTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCC
T ss_pred ccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCC
Confidence 45899999999751 4899999999999999976 667777899999999999998764321 1
Q ss_pred cc-----cCC------CcEEEECCcccC-CccccceeEEEEe---CHHHHHHHHHHhHhhCCCccHHHHHHHHHhh----
Q 013019 343 AL-----SLG------ADLVLHSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---- 403 (451)
Q Consensus 343 pl-----~~G------aDiVv~S~SK~l-~G~gdv~gG~Iv~---~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL---- 403 (451)
++ .+| ..++++|+||.+ +.+| .++|++++ +++++++++..... ..+.+.....++...+
T Consensus 292 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~~~~l~~~~ 369 (500)
T 3tcm_A 292 SFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECG-KRGGYFEITGFSAPVREQIYKIASV-NLCSNITGQILASLVMNPPK 369 (500)
T ss_dssp CHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGG-GCCEEEEEESCCTTHHHHHHHHHHT-TCCCCHHHHHHHHHHHSCCC
T ss_pred cHHHHHHHhccccCCeEEEEEecCCccCCCCCc-cceEEEEEeCCCHHHHHHHHHHHhc-ccCCCHHHHHHHHHHhcCcc
Confidence 11 111 137788999999 4344 57899887 88899988876643 3344444444333222
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 013019 404 ----------KTLHLRVQQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 404 ----------~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
+.+....++..++++.+.+.|++.|++..
T Consensus 370 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~ 408 (500)
T 3tcm_A 370 ASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITC 408 (500)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 34555567778889999999999888754
No 123
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.85 E-value=7.5e-20 Score=185.39 Aligned_cols=213 Identities=16% Similarity=0.180 Sum_probs=167.4
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-------ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-------l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
..+...+||++|++++|.+++++++||++|+..++.++ +++||+|+++.+.|.++...+ ...|.++.++
T Consensus 32 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~----~~~g~~~~~~ 107 (390)
T 3b8x_A 32 MGEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPL----QQYGLRVKFV 107 (390)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHH----HHTTCEEEEE
T ss_pred CChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEE
Confidence 46889999999999999999999999999999999998 789999999999999876543 3568888887
Q ss_pred CCC------CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCC--cEEE
Q 013019 281 DPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA--DLVL 352 (451)
Q Consensus 281 d~~------D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~Ga--DiVv 352 (451)
+.. |+++|++++++ ++++|+++ |++|...|+++|.++|+++|+++|+|++++.+.......+|. |+.+
T Consensus 108 ~~~~~~~~~d~~~l~~~i~~-~~~~v~~~---~~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~g~~~~~~~ 183 (390)
T 3b8x_A 108 DIDINTLNIDIESLKEAVTD-STKAILTV---NLLGNPNNFDEINKIIGGRDIILLEDNCESMGATFNNKCAGTFGLMGT 183 (390)
T ss_dssp CBCTTTCSBCHHHHHHHCCT-TEEEEEEE---CGGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETTEETTSSSSEEE
T ss_pred ecCccccCcCHHHHHHHhCc-CCeEEEEE---CCccChhhHHHHHHHHHHcCCEEEEECcCcccCEECCcccccccceEE
Confidence 643 89999999987 49999985 467778999999999999999999999998654434344566 4544
Q ss_pred ECC--cccCCccccceeEEEEeCH-HHHHHHHHHhHh-----------------------------hCC--CccHHHHHH
Q 013019 353 HSA--TKFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-----------------------------LGG--ALNPNAAYL 398 (451)
Q Consensus 353 ~S~--SK~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~-----------------------------~G~--~ls~~~a~l 398 (451)
.|+ +|.++++ .||++++++ ++.++++..... .|. .+++..+++
T Consensus 184 ~s~~~~k~~~~g---~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~ 260 (390)
T 3b8x_A 184 FSSFYSNHIATM---EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAI 260 (390)
T ss_dssp EECCTTSSSCSS---SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHH
T ss_pred EEccCCCCCccC---CceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHH
Confidence 432 3444332 369998876 677766654321 121 166788887
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 013019 399 IIRGMKTLHLRVQQQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 399 ~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~ 431 (451)
.+..++.+..+.++..++++.+.+.|+++|+++
T Consensus 261 ~l~~l~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 293 (390)
T 3b8x_A 261 GIEQLKKLPRFISVRRKNAEYFLDKFKDHPYLD 293 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 777788888888999999999999999988874
No 124
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.85 E-value=3.7e-20 Score=190.53 Aligned_cols=215 Identities=15% Similarity=0.175 Sum_probs=155.5
Q ss_pred CCCchh-HHHHHHHHHhhhC----------CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhh-cC
Q 013019 206 RYGNPT-TVVVEEKMSALEG----------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KM 273 (451)
Q Consensus 206 R~~npt-~~~Lee~LA~l~g----------ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~-~~ 273 (451)
+|+.+. ..+|+++|+++++ .++.+++++|++|+..++.+++++||+|+++++.|.+.... +. ..
T Consensus 81 ~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~ 156 (435)
T 3piu_A 81 LFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRD----LKWRT 156 (435)
T ss_dssp HCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----TTTTT
T ss_pred ccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHH----HHHhc
Confidence 444433 5789999998887 46778888888999999999999999999999999986532 33 56
Q ss_pred CcEEEEeCC-------CCHHHHHHhhcC-----CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCC
Q 013019 274 GITATVIDP-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP 338 (451)
Q Consensus 274 Gi~v~~vd~-------~D~d~Le~ai~~-----~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~ 338 (451)
|.++..++. .|+++|++++++ .++++|++++|+||||.+.+ +++|.++|++||+++|+|++|+..
T Consensus 157 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 236 (435)
T 3piu_A 157 GVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGT 236 (435)
T ss_dssp CCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGG
T ss_pred CCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecccccc
Confidence 888777653 389999999875 24899999999999999976 578888999999999999998652
Q ss_pred Cc-----cccc----c---------CCCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCCccHHHHHH-
Q 013019 339 LN-----QKAL----S---------LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYL- 398 (451)
Q Consensus 339 ~~-----~~pl----~---------~GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ls~~~a~l- 398 (451)
.. .... + ...++++.|+||.++.+| .++|++++ ++++.+.++......+. ++.....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 313 (435)
T 3piu_A 237 AFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMSSFGLV--SSQTQHLL 313 (435)
T ss_dssp CCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGG-GCEEEEEESCHHHHHHHHHHGGGSCC--CHHHHHHH
T ss_pred ccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCc-eeEEEEEeCCHHHHHHHHHHhhcCCC--CHHHHHHH
Confidence 11 1111 1 122388999999997555 56788888 56777777765544432 3333322
Q ss_pred --HHHhhH----HHHHHHHHHHHHHHHHHHHHHcC
Q 013019 399 --IIRGMK----TLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 399 --~lrgL~----tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
++...+ .+..+.++..++.+.+.+.|+++
T Consensus 314 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (435)
T 3piu_A 314 SAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS 348 (435)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 222222 23344566677888888889876
No 125
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.85 E-value=2.1e-20 Score=185.53 Aligned_cols=213 Identities=16% Similarity=0.177 Sum_probs=155.8
Q ss_pred hhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHHccCCCeEEEcC-CCCcchHHHHHHhhhcCCcEEEEeCC--
Q 013019 210 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIETVLPKMGITATVIDP-- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae----~~vv~sSG~aAi~~al~all~~GD~VIv~~-~~Y~~t~~~l~~~l~~~Gi~v~~vd~-- 282 (451)
+...++++++++++|.+ +.+++++|++|+..++.+++++||+|++.+ +.|+..+ ...+...|+++..++.
T Consensus 37 ~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~~---~~~~~~~g~~~~~v~~~~ 113 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARM---VEMAGLMGIAHHAYDCGE 113 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHH---HHHHHHHTCCEEEEECCT
T ss_pred HHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCCeEEEEeCCCccHHH---HHHHHHhCCceEEEeCCC
Confidence 66789999999999842 477788888999999999999999988776 4454432 2334455777766653
Q ss_pred ---CCHHHHHHhhcCC-CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc-ccccCCCcEEEECCcc
Q 013019 283 ---ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSATK 357 (451)
Q Consensus 283 ---~D~d~Le~ai~~~-~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-~pl~~GaDiVv~S~SK 357 (451)
.|+++|+++++++ ++++|++.+|+||||.+.++++|.++|+++|+++|+|++++.+... ....++.|+++.|++|
T Consensus 114 ~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K 193 (366)
T 1m32_A 114 VARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANK 193 (366)
T ss_dssp TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSS
T ss_pred CCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcc
Confidence 5899999999753 4889999999999999999999999999999999999998754321 1123478999999999
Q ss_pred cCCccccceeEEEEeCHHHHHHHHHHh-----------Hhh----C---CCccHHHHHHHHHhhHH------HHHHHHHH
Q 013019 358 FIGGHNDVLAGSISGSGKLVTQIRNLH-----------HVL----G---GALNPNAAYLIIRGMKT------LHLRVQQQ 413 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~~eli~~lr~~~-----------~~~----G---~~ls~~~a~l~lrgL~t------l~~Rl~~~ 413 (451)
+++++. ..|+++++++++++++... ..+ + ...+....+.+...++. +....++.
T Consensus 194 ~~~~~~--g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 271 (366)
T 1m32_A 194 CIQGVP--GFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRY 271 (366)
T ss_dssp TTCCCS--SEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccCCC--ceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHH
Confidence 886553 2499999988876654310 000 1 24455444444444433 34456777
Q ss_pred HHHHHHHHHHHHcC
Q 013019 414 NSTALRMAEILEAH 427 (451)
Q Consensus 414 ~~nA~~Lae~L~~~ 427 (451)
.++++.+.+.|+++
T Consensus 272 ~~~~~~l~~~L~~~ 285 (366)
T 1m32_A 272 QQNQRSLVAGMRAL 285 (366)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC
Confidence 78888999999876
No 126
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.85 E-value=1.7e-19 Score=182.90 Aligned_cols=211 Identities=12% Similarity=0.051 Sum_probs=144.7
Q ss_pred HHHHHHHHHhhhC--------CCcEEE--eCCHHHHHHHHHHHHc---cCCCeEEEcCCCCcchHHHHHHhhhcCCcEEE
Q 013019 212 TVVVEEKMSALEG--------AESTVI--MASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (451)
Q Consensus 212 ~~~Lee~LA~l~g--------ae~~vv--~sSG~aAi~~al~all---~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~ 278 (451)
...|++.++++++ .++.++ +++|++|+..++.++. ++||+|++++|+|.+....+ +..|.++.
T Consensus 73 ~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~~ 148 (401)
T 7aat_A 73 LADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIF----RDAGLQLQ 148 (401)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHH----HHTTCEEE
T ss_pred CHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHH----HHcCCeeE
Confidence 4567777777654 345544 6677799998876654 89999999999999876544 44577766
Q ss_pred EeCC-------CCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcccc---
Q 013019 279 VIDP-------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA--- 343 (451)
Q Consensus 279 ~vd~-------~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~p--- 343 (451)
.++. .|++++++.+++ .++++|++++|+||||.+.+ +++|+++|++||+++|+|++|........
T Consensus 149 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~ 228 (401)
T 7aat_A 149 AYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRD 228 (401)
T ss_dssp EEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHH
T ss_pred eeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCcccc
Confidence 6542 267766666642 24899999999999998765 78899999999999999999876533211
Q ss_pred --------ccCCCcEEEECCcccCCccccceeEEEEe---CHH----HHHHHHHHhHhhCCCccHHHHHHHHHh------
Q 013019 344 --------LSLGADLVLHSATKFIGGHNDVLAGSISG---SGK----LVTQIRNLHHVLGGALNPNAAYLIIRG------ 402 (451)
Q Consensus 344 --------l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~---~~e----li~~lr~~~~~~G~~ls~~~a~l~lrg------ 402 (451)
......+++.|+||.++.+|. +.|+++. +++ +++.++..........+...+..+...
T Consensus 229 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 307 (401)
T 7aat_A 229 AWALRHFIEQGIDVVLSQSYAKNMGLYGE-RAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPEL 307 (401)
T ss_dssp THHHHHHHHTTCCCEEEEECTTTSCCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHhcCCcEEEEecCCcccccccC-ceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHH
Confidence 112356899999999998774 5677664 665 445555444444334444444333222
Q ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 403 ----MKTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 403 ----L~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
.+.+....++..++.+.+.+.|+++
T Consensus 308 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 336 (401)
T 7aat_A 308 RKEWLVEVKGMADRIISMRTQLVSNLKKE 336 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2334444566777888888888876
No 127
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.85 E-value=4.6e-20 Score=194.76 Aligned_cols=213 Identities=12% Similarity=0.068 Sum_probs=159.0
Q ss_pred HHHHHHHhhhCCC----cE--EEeCCHHHHHHHHHHHHccCC--------CeEEEcCCCCcchHHHHHHhhhcCCcEEEE
Q 013019 214 VVEEKMSALEGAE----ST--VIMASGMSASTVMLLALVPAG--------GHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (451)
Q Consensus 214 ~Lee~LA~l~gae----~~--vv~sSG~aAi~~al~all~~G--------D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~ 279 (451)
++++++++++|.+ .. +++++|++|+..++.+++.+| |+|+++.+.|.+.... +...|+++..
T Consensus 143 ~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~----~~~~G~~v~~ 218 (514)
T 3mad_A 143 EVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKA----AQYFGIKLVR 218 (514)
T ss_dssp HHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHH----HHHHTCEEEE
T ss_pred HHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHH----HHHcCCeeEE
Confidence 4556678888865 44 888889999999999998877 9999999999986543 4456888888
Q ss_pred eCCC-----CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc------------cc
Q 013019 280 IDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN------------QK 342 (451)
Q Consensus 280 vd~~-----D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~------------~~ 342 (451)
++.+ |+++|+++++++ +++|++++|+||+|.+.|+++|.++|+++|++||+|++|+.+.. ..
T Consensus 219 v~~~~~~~~d~~~Le~~i~~~-~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~ 297 (514)
T 3mad_A 219 TPLDADYRADVAAMREAITPN-TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFD 297 (514)
T ss_dssp ECBCTTSCBCHHHHHHHCCTT-EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS
T ss_pred eeeCCCCCCCHHHHHHHhccC-CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCccc
Confidence 8754 899999999874 99999999999999999999999999999999999999875432 12
Q ss_pred cccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH--h----------hCCCc--cHHHHHHHHHh--hHHH
Q 013019 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--V----------LGGAL--NPNAAYLIIRG--MKTL 406 (451)
Q Consensus 343 pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~--~----------~G~~l--s~~~a~l~lrg--L~tl 406 (451)
....|+|+++.|++|++.++. ..|+++.+++.+.+...... . .|... ....+|.+++. .+.+
T Consensus 298 ~~~~g~d~~~~s~~K~l~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~ 375 (514)
T 3mad_A 298 FRLEGVTSVSADTHKYGYGAK--GTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGY 375 (514)
T ss_dssp TTSTTCCEEEECTTTTTCCCS--SCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcEEEECchhccCCCC--CeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHH
Confidence 234588999999999965543 36777776654433211000 0 11111 12345555443 3446
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCeEEE
Q 013019 407 HLRVQQQNSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 407 ~~Rl~~~~~nA~~Lae~L~~~p~V~~V 433 (451)
..++++..++++.+.+.|++.|+++.+
T Consensus 376 ~~~~~~~~~~~~~l~~~L~~~~g~~~~ 402 (514)
T 3mad_A 376 LDATRRILQAADRLKAGVRAIPSLKIL 402 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTCEES
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEe
Confidence 677888899999999999998887543
No 128
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.85 E-value=4.2e-20 Score=185.13 Aligned_cols=214 Identities=14% Similarity=0.103 Sum_probs=155.1
Q ss_pred hhHHHHHHHHHhhhCCC---cEEE-eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 210 PTTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae---~~vv-~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
+..+++++++++++|.+ +.++ +++|++|+..++.+++++||+|++.++.|.+.. .. ..+...|+++..++.
T Consensus 52 ~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~-~~-~~~~~~g~~~~~v~~~~~ 129 (376)
T 3f0h_A 52 STMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHR-FV-QLCEIHEIPYVALKLEHG 129 (376)
T ss_dssp HHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHH-HH-HHHHHTTCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHH-HH-HHHHHcCCceEEEeCCCC
Confidence 55678999999999874 4555 456789999999999999999999988776633 22 345566777776642
Q ss_pred --CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECCcccC
Q 013019 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (451)
Q Consensus 283 --~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~SK~l 359 (451)
.|+++|++++++ ++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+.. ......|+|+++.|++|++
T Consensus 130 ~~~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l 208 (376)
T 3f0h_A 130 KKLTKEKLYEYDNQ-NFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVL 208 (376)
T ss_dssp CCCCHHHHHTTTTS-CCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTT
T ss_pred CCCCHHHHHHhhcc-CceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCcccc
Confidence 489999998876 499999999999999999999999999999999999999765432 2222457899999999999
Q ss_pred CccccceeEEEEeCHHHHHHHHHHhH------------h-----hCCCccHHHHHHHHHhhHH------HHHHHHHHHHH
Q 013019 360 GGHNDVLAGSISGSGKLVTQIRNLHH------------V-----LGGALNPNAAYLIIRGMKT------LHLRVQQQNST 416 (451)
Q Consensus 360 ~G~gdv~gG~Iv~~~eli~~lr~~~~------------~-----~G~~ls~~~a~l~lrgL~t------l~~Rl~~~~~n 416 (451)
+++. .+|+++.+++++++++.... . .....+....+.+..+++. +....++..++
T Consensus 209 ~~~~--G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 286 (376)
T 3f0h_A 209 ACPP--GISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQ 286 (376)
T ss_dssp CCCS--SCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred cCCC--ceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9443 26889999998888764210 0 0112223221222223332 34455666677
Q ss_pred HHHHHHHHHcCC
Q 013019 417 ALRMAEILEAHP 428 (451)
Q Consensus 417 A~~Lae~L~~~p 428 (451)
++.+.+.|++.+
T Consensus 287 ~~~l~~~L~~~~ 298 (376)
T 3f0h_A 287 AADFRAKIKDLP 298 (376)
T ss_dssp HHHHHHHTTTSS
T ss_pred HHHHHHHHHHcC
Confidence 888888887764
No 129
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.85 E-value=6.1e-20 Score=187.24 Aligned_cols=211 Identities=13% Similarity=0.131 Sum_probs=147.3
Q ss_pred HHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC------
Q 013019 212 TVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ 282 (451)
Q Consensus 212 ~~~Lee~LA~l~gae---~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~------ 282 (451)
++++.+.+....+.+ +.+++++|++|+..++.+++++||+|++++|.|.+.... +...|.++..++.
T Consensus 85 r~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~ 160 (413)
T 3t18_A 85 RKIVIDTLFGPYKPEGYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKI----CEEFGRNFKTFEFFTDDFA 160 (413)
T ss_dssp HHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHH----HHHHTCEEEEECCBCTTSS
T ss_pred HHHHHHHHhcccCccccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHH----HHHhCCeEEEeeccCCCCC
Confidence 344444444444555 667777777999999999999999999999999886643 3456777777753
Q ss_pred CCHHHHHHhhcCC---CeE-EEEEeCC-CCCccccccHHHH---HHHHH------hcCCEEEEecCCCCCCcc----cc-
Q 013019 283 ADMEGLEAALNNN---NVS-LFFTESP-TNPFLRCVDVKLV---SDLCH------KKGAIVCIDGTFATPLNQ----KA- 343 (451)
Q Consensus 283 ~D~d~Le~ai~~~---~tk-lV~lesP-sNPtG~v~DL~~I---aelA~------~~g~~lVVD~tfa~~~~~----~p- 343 (451)
.|+++|++++++. +++ +|++++| +||||.+.+.+++ +++|+ ++|++||+|++|...... .+
T Consensus 161 ~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 240 (413)
T 3t18_A 161 FNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKF 240 (413)
T ss_dssp BCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGG
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHH
Confidence 3789999998741 256 8999999 9999999986554 55555 899999999997532111 11
Q ss_pred c----cCCCc---EEEECCcccCCccccceeEEEEe---CHHHHHHHHHHhHhhC----CCccHHHHHHHHHhhHH----
Q 013019 344 L----SLGAD---LVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHVLG----GALNPNAAYLIIRGMKT---- 405 (451)
Q Consensus 344 l----~~GaD---iVv~S~SK~l~G~gdv~gG~Iv~---~~eli~~lr~~~~~~G----~~ls~~~a~l~lrgL~t---- 405 (451)
. ..+.+ +++.|+||.++.+| .+.|++++ +++++++++..+.... ...+...+..+...++.
T Consensus 241 ~~~~~~~~~~~~~i~~~S~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 319 (413)
T 3t18_A 241 FEKFSNLPRNLFVVVAFSMSKSHTAYG-LRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKK 319 (413)
T ss_dssp GGGGTTCCTTEEEEEEEEHHHHTTCGG-GCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHH
T ss_pred HHHHhhcCCCeeEEEEEecCccCCCcC-cCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHH
Confidence 1 11223 78899999998776 56789888 8999998887654321 23555555554444432
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHcC
Q 013019 406 -----LHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 406 -----l~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+....++..++.+.+.+.|+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ 346 (413)
T 3t18_A 320 IYEQELVDLRNMLKSRADVFVTAAKEN 346 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2233455667778888888876
No 130
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.85 E-value=2.5e-20 Score=184.05 Aligned_cols=215 Identities=13% Similarity=0.126 Sum_probs=156.5
Q ss_pred hhHHHHHHHHHhhhCCC---cEEE-eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 210 PTTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae---~~vv-~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
+...+++++|++++|.+ +.++ +++|++|+..++.++++ |+|+++++.|.+. . +...+...|+++..++.
T Consensus 33 ~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~~~~~-~-~~~~~~~~g~~~~~v~~~~~ 108 (353)
T 2yrr_A 33 RVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVNGAFSQ-R-VAEMAALHGLDPEVLDFPPG 108 (353)
T ss_dssp HHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEECSHHHH-H-HHHHHHHTTCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcCCCchH-H-HHHHHHHcCCceEEEeCCCC
Confidence 33788999999999973 4455 46677999999988876 8999999888875 2 22445667888777753
Q ss_pred --CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccCCCcEEEECCcccC
Q 013019 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (451)
Q Consensus 283 --~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~GaDiVv~S~SK~l 359 (451)
.|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.. .....++.|+++.|++|++
T Consensus 109 ~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~ 188 (353)
T 2yrr_A 109 EPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCL 188 (353)
T ss_dssp SCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTT
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccc
Confidence 5899999999762389999999999999999999999999999999999999864322 1122347899999999977
Q ss_pred CccccceeEEEEeCHHHHHHHHH-------------H--hHhhCCCccHHHHHHHHHhhHH-----HHHHHHHHHHHHHH
Q 013019 360 GGHNDVLAGSISGSGKLVTQIRN-------------L--HHVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALR 419 (451)
Q Consensus 360 ~G~gdv~gG~Iv~~~eli~~lr~-------------~--~~~~G~~ls~~~a~l~lrgL~t-----l~~Rl~~~~~nA~~ 419 (451)
+++.. .|+++++++++++++. . ......+.+......+...++. +....++..++++.
T Consensus 189 ~~~~g--~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 266 (353)
T 2yrr_A 189 SAPPG--LAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAW 266 (353)
T ss_dssp CCCSS--CEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred cCCCc--eEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 65432 5999999988876641 0 0111223444443333333332 34456777788889
Q ss_pred HHHHHHcCCCeE
Q 013019 420 MAEILEAHPKVL 431 (451)
Q Consensus 420 Lae~L~~~p~V~ 431 (451)
+.+.|++. +++
T Consensus 267 l~~~L~~~-g~~ 277 (353)
T 2yrr_A 267 VLEELKAR-GFR 277 (353)
T ss_dssp HHHHHHHT-TCE
T ss_pred HHHHHHHC-CCc
Confidence 99999886 554
No 131
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.85 E-value=4.2e-20 Score=189.70 Aligned_cols=211 Identities=13% Similarity=0.067 Sum_probs=152.9
Q ss_pred hhHHHHHHHHHhhhCC--CcEEEeCCHHHHH--HHHHHHHcc--C----------CCeEEEcCCCCcchHHHHHHhhhcC
Q 013019 210 PTTVVVEEKMSALEGA--ESTVIMASGMSAS--TVMLLALVP--A----------GGHIVTTTDCYRKTRIFIETVLPKM 273 (451)
Q Consensus 210 pt~~~Lee~LA~l~ga--e~~vv~sSG~aAi--~~al~all~--~----------GD~VIv~~~~Y~~t~~~l~~~l~~~ 273 (451)
.....|+++|+++++. ++.++++++++++ ..++.+++. + ||+|++++|+|.+.... +...
T Consensus 78 ~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~----~~~~ 153 (427)
T 3ppl_A 78 DGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSI----TERF 153 (427)
T ss_dssp SCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHH----HHHT
T ss_pred CCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHH----HHHc
Confidence 3467899999999986 4455555556888 477888877 6 99999999999986644 4456
Q ss_pred CcEEEEeCC----CCHHHHHHhhcCCCeEEEEEe-CCCCCccccccHH---HHHHHH-HhcCCEEEEecCCCCCCcc---
Q 013019 274 GITATVIDP----ADMEGLEAALNNNNVSLFFTE-SPTNPFLRCVDVK---LVSDLC-HKKGAIVCIDGTFATPLNQ--- 341 (451)
Q Consensus 274 Gi~v~~vd~----~D~d~Le~ai~~~~tklV~le-sPsNPtG~v~DL~---~IaelA-~~~g~~lVVD~tfa~~~~~--- 341 (451)
|.++..++. .|+++|+++++..++++|+++ +|+||||.+++.+ +|+++| +++|+++|+|++|+.....
T Consensus 154 g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~ 233 (427)
T 3ppl_A 154 GFEMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEF 233 (427)
T ss_dssp TCEEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCC
T ss_pred CCEEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCC
Confidence 777766643 389999999954459999876 7899999999876 888888 9999999999998752111
Q ss_pred ----ccc-------cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH-----
Q 013019 342 ----KAL-------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----- 405 (451)
Q Consensus 342 ----~pl-------~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t----- 405 (451)
... ..+.++++.|+||+ +++| .++|+++++++++++++......+...+...+..+...++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G-~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 311 (427)
T 3ppl_A 234 PEVIDIVGLGEAAGNPNRFWAFTSTSKI-TLAG-AGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVR 311 (427)
T ss_dssp CCCCCHHHHHHHTTCTTSEEEEEESTTT-SCTT-SSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHH
T ss_pred CCccchhhhhhccCCCCcEEEEechhhc-cCcC-ccEEEEEcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHH
Confidence 111 23567999999999 4444 57899999999999998887776666677766555444432
Q ss_pred --HHHHHHHHHHHHHHHHHHHHc
Q 013019 406 --LHLRVQQQNSTALRMAEILEA 426 (451)
Q Consensus 406 --l~~Rl~~~~~nA~~Lae~L~~ 426 (451)
+....+...++.+.+.+.|.+
T Consensus 312 ~~~~~~~~~~~~~~~~l~~~L~~ 334 (427)
T 3ppl_A 312 AVMRKHAASLAPKFNKVLEILDS 334 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 222233344555566666644
No 132
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.85 E-value=1.5e-19 Score=183.97 Aligned_cols=209 Identities=13% Similarity=0.121 Sum_probs=164.7
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-----
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al-l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----- 282 (451)
.|...+|+++|++++|.++.+++++|++|+..++.++ +++||+|+++.+.|.++...+ ...|+++.+++.
T Consensus 31 g~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~~~~~ 106 (394)
T 1o69_A 31 GEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPI----CYLKAKPVFIDCDETYN 106 (394)
T ss_dssp THHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHH----HHTTCEEEEECBCTTSS
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHH----HHcCCEEEEEEeCCCCC
Confidence 4778999999999999988999999999999999999 899999999999999976444 346888888764
Q ss_pred CCHHHHHHhhcCC--CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccc---c-CCCcEEEECCc
Q 013019 283 ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKAL---S-LGADLVLHSAT 356 (451)
Q Consensus 283 ~D~d~Le~ai~~~--~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl---~-~GaDiVv~S~S 356 (451)
.|+++|++++++. ++++|++++ |+|...++++|.++|+++|+++|+|++++.+...... . .++|+...|.+
T Consensus 107 ~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~ 183 (394)
T 1o69_A 107 IDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGN 183 (394)
T ss_dssp BCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTT
T ss_pred cCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCC
Confidence 3789999998752 489999974 8999999999999999999999999999854221111 1 13456666668
Q ss_pred ccCCccccceeEEEEeC-HHHHHHHHHHhHhhCC--------------CccHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 013019 357 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG--------------ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMA 421 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G~--------------~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~La 421 (451)
|.++|.+ +|+++++ ++++++++........ .+++..+.+.+..++.+..++++..++++.+.
T Consensus 184 K~l~~~~---~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~ 260 (394)
T 1o69_A 184 KIITTSG---GGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYK 260 (394)
T ss_dssp SSSCCSS---CEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred ccCCCCC---ceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888654 8999995 7888888765432100 04556666666567778888888899999999
Q ss_pred HHHHcC
Q 013019 422 EILEAH 427 (451)
Q Consensus 422 e~L~~~ 427 (451)
+.|++.
T Consensus 261 ~~L~~~ 266 (394)
T 1o69_A 261 EFLGEY 266 (394)
T ss_dssp HHHTTT
T ss_pred HHhccc
Confidence 999876
No 133
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.85 E-value=1.5e-19 Score=181.21 Aligned_cols=214 Identities=14% Similarity=0.169 Sum_probs=153.9
Q ss_pred HHHHHHHHHhhhCC------CcEEEeCCHHHHHHHHHHHHc---cCCCeEEEcCC-CCcchHHHHHHhhhcCCcEEEEeC
Q 013019 212 TVVVEEKMSALEGA------ESTVIMASGMSASTVMLLALV---PAGGHIVTTTD-CYRKTRIFIETVLPKMGITATVID 281 (451)
Q Consensus 212 ~~~Lee~LA~l~ga------e~~vv~sSG~aAi~~al~all---~~GD~VIv~~~-~Y~~t~~~l~~~l~~~Gi~v~~vd 281 (451)
..+++++++++++. ++.+++++|++|+..++.++. ++||+|++.++ .|+... ...+...|.++..++
T Consensus 40 ~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~---~~~~~~~g~~~~~v~ 116 (385)
T 2bkw_A 40 FQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRF---ADCLRSYGAQVDVVR 116 (385)
T ss_dssp HHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHH---HHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHH---HHHHHHcCCceEEEe
Confidence 45678888888875 345666778899999999997 89999988744 454432 134456788888887
Q ss_pred C------CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc--CCEEEEecCCCCCCc-cccccCCCcEEE
Q 013019 282 P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN-QKALSLGADLVL 352 (451)
Q Consensus 282 ~------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~--g~~lVVD~tfa~~~~-~~pl~~GaDiVv 352 (451)
. .|+++|++++++.++++|++++|+||||.+.|+++|.++|+++ |+++|+|++++.+.. .....+++|+++
T Consensus 117 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~ 196 (385)
T 2bkw_A 117 PLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFAL 196 (385)
T ss_dssp CSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEE
T ss_pred cCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEEE
Confidence 6 4899999999763489999999999999999999999999999 999999999874422 122245789999
Q ss_pred ECCcccCCccccceeEEEEeCHHHHH-HHH------------------HH-hHh-hC-----CCccHHHHHHHHHhhHH-
Q 013019 353 HSATKFIGGHNDVLAGSISGSGKLVT-QIR------------------NL-HHV-LG-----GALNPNAAYLIIRGMKT- 405 (451)
Q Consensus 353 ~S~SK~l~G~gdv~gG~Iv~~~eli~-~lr------------------~~-~~~-~G-----~~ls~~~a~l~lrgL~t- 405 (451)
.|++|+++|+.. .|++++++++++ +++ .. ... .+ ...+......+...++.
T Consensus 197 ~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~ 274 (385)
T 2bkw_A 197 TASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEI 274 (385)
T ss_dssp EESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHH
T ss_pred ecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 999998875431 489999988776 542 11 111 11 23444444333333333
Q ss_pred ----HHHHHHHHHHHHHHHHHHH-HcCCCeE
Q 013019 406 ----LHLRVQQQNSTALRMAEIL-EAHPKVL 431 (451)
Q Consensus 406 ----l~~Rl~~~~~nA~~Lae~L-~~~p~V~ 431 (451)
+..+.++..++++.+.+.| ++. +++
T Consensus 275 ~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~ 304 (385)
T 2bkw_A 275 LEEGLHKRWDLHREMSDWFKDSLVNGL-QLT 304 (385)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHTTT-CCE
T ss_pred HHccHHHHHHHHHHHHHHHHHHHHHhc-Cce
Confidence 3445677778889999999 776 553
No 134
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.84 E-value=6.2e-20 Score=186.60 Aligned_cols=216 Identities=16% Similarity=0.191 Sum_probs=156.2
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc------cCCCe-EEEcCCCCcchHHHHHHhhhcC--CcEEE
Q 013019 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV------PAGGH-IVTTTDCYRKTRIFIETVLPKM--GITAT 278 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all------~~GD~-VIv~~~~Y~~t~~~l~~~l~~~--Gi~v~ 278 (451)
+...+++++|++++|.+ +.+++++|++++..++.+++ ++||+ |+++.+.|+++...+....... |.++.
T Consensus 71 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~ 150 (416)
T 1qz9_A 71 DLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLR 150 (416)
T ss_dssp GHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEE
Confidence 56788999999999974 56666777789988888776 88997 5555667776655443333333 88888
Q ss_pred EeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc-ccccCCCcEEEECCcc
Q 013019 279 VIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSATK 357 (451)
Q Consensus 279 ~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-~pl~~GaDiVv~S~SK 357 (451)
+++. +++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+... ....+|+|+++.|++|
T Consensus 151 ~v~~--~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K 227 (416)
T 1qz9_A 151 LVDS--PEELPQAIDQ-DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYK 227 (416)
T ss_dssp EESS--GGGHHHHCST-TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSS
T ss_pred EeCc--HHHHHHHhCC-CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCcc
Confidence 8886 7899999987 4999999999999999999999999999999999999998754221 1123578999999999
Q ss_pred cCC-cccccee-EEEEeCHHHHHHHHHHh-----------------------HhhCCCccHHHHHHHHHhhHH-----HH
Q 013019 358 FIG-GHNDVLA-GSISGSGKLVTQIRNLH-----------------------HVLGGALNPNAAYLIIRGMKT-----LH 407 (451)
Q Consensus 358 ~l~-G~gdv~g-G~Iv~~~eli~~lr~~~-----------------------~~~G~~ls~~~a~l~lrgL~t-----l~ 407 (451)
+++ |.+ + |+++++++++++++... .....+.+......+...++. +.
T Consensus 228 ~l~~g~~---~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 304 (416)
T 1qz9_A 228 YLNGGPG---SQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMA 304 (416)
T ss_dssp TTCCCTT---CCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHH
T ss_pred cCCCCCC---CeEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHH
Confidence 975 444 5 89999888776654321 111123344433333333332 34
Q ss_pred HHHHHHHHHHHHHHHHHHcC-C--CeE
Q 013019 408 LRVQQQNSTALRMAEILEAH-P--KVL 431 (451)
Q Consensus 408 ~Rl~~~~~nA~~Lae~L~~~-p--~V~ 431 (451)
...++..++++.+.+.|++. | ++.
T Consensus 305 ~~~~~~~~~~~~l~~~L~~~~~~~g~~ 331 (416)
T 1qz9_A 305 SLRRKSLALTDLFIELVEQRCAAHELT 331 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCE
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCeE
Confidence 45677778888888889875 5 664
No 135
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.84 E-value=1.7e-19 Score=186.27 Aligned_cols=216 Identities=15% Similarity=0.124 Sum_probs=164.5
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH---------ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEE
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~al---------l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v 277 (451)
+.++...+|+++|++++|.++.++++||++|+..++.++ +++||+|+++.+.|.++...+ ...|+++
T Consensus 59 ~~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~----~~~g~~~ 134 (437)
T 3bb8_A 59 TTGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPT----IQNGLIP 134 (437)
T ss_dssp BSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHH----HHTTCEE
T ss_pred CCChHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHH----HHcCCEE
Confidence 356889999999999999999999999999999999988 789999999999999876443 3468888
Q ss_pred EEeCCC------CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCC--Cc
Q 013019 278 TVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--AD 349 (451)
Q Consensus 278 ~~vd~~------D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~G--aD 349 (451)
.+++.. |+++|+++++++ +++|++++ ++|...|+++|.++|+++|+++|+|++++.+.......+| .|
T Consensus 135 ~~v~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d 210 (437)
T 3bb8_A 135 VFVDVDIPTYNVNASLIEAAVSDK-TKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGKMAGTFGD 210 (437)
T ss_dssp EECCEETTTTEECGGGHHHHCCTT-EEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSS
T ss_pred EEEeccCccCCcCHHHHHHhcCCC-CeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCceECCeecccccC
Confidence 887642 789999999874 99999863 3455589999999999999999999999865433322345 79
Q ss_pred EEEECCcccCCccccceeEEEEeCHHHHHH-HHHHhHh-------------------------------------hC--C
Q 013019 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQ-IRNLHHV-------------------------------------LG--G 389 (451)
Q Consensus 350 iVv~S~SK~l~G~gdv~gG~Iv~~~eli~~-lr~~~~~-------------------------------------~G--~ 389 (451)
+++.|++|..+.++ .++|+++++++.+.. ++..+.. .| .
T Consensus 211 ~~~~s~~~~k~l~~-g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 289 (437)
T 3bb8_A 211 IGTVSFYPAKHITM-GEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNL 289 (437)
T ss_dssp EEEEECSTTSSSCC-SSCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBC
T ss_pred EEEEECcCCcCCCC-CCeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCccc
Confidence 99998755444333 258999998665443 3322110 11 1
Q ss_pred CccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 013019 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~ 431 (451)
.+++..+.+.+..++.+..+++++.++++.+.+.|++.+++.
T Consensus 290 ~~~~~~aa~~l~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 331 (437)
T 3bb8_A 290 KITDMQAACGLAQLERIEEFVEKRKANFKYLKDALQSCADFI 331 (437)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTTTE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Confidence 235667766666788878888888899999999999887653
No 136
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.84 E-value=2.1e-19 Score=183.58 Aligned_cols=211 Identities=13% Similarity=0.115 Sum_probs=146.4
Q ss_pred HHHHHHHHHhh----hCCC---cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC--
Q 013019 212 TVVVEEKMSAL----EGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (451)
Q Consensus 212 ~~~Lee~LA~l----~gae---~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-- 282 (451)
...|++.++++ .+.+ +.+++++|++|+..++.+++++||+|++++|.|.+... .+...|.++..++.
T Consensus 82 ~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~v~~~~ 157 (418)
T 3rq1_A 82 IPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRV----ICSDTGRTLVTYSLFD 157 (418)
T ss_dssp CHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHH----HHHHTTCEEEEECSBC
T ss_pred hHHHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHH----HHHHcCCEEEEEeeeC
Confidence 34455555554 3555 66777777799999999999999999999999988664 34556888877763
Q ss_pred ----CCHHHHHHhhcC----CCeEEEEEeCC-CCCccccccHHH---HHHHHH------hcCCEEEEecCCCCCCccc--
Q 013019 283 ----ADMEGLEAALNN----NNVSLFFTESP-TNPFLRCVDVKL---VSDLCH------KKGAIVCIDGTFATPLNQK-- 342 (451)
Q Consensus 283 ----~D~d~Le~ai~~----~~tklV~lesP-sNPtG~v~DL~~---IaelA~------~~g~~lVVD~tfa~~~~~~-- 342 (451)
.|+++|++++++ +..++|++++| +||||.+.+.++ |+++|+ ++|+++|+|++|.......
T Consensus 158 ~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~ 237 (418)
T 3rq1_A 158 EHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDE 237 (418)
T ss_dssp TTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHH
T ss_pred CCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHH
Confidence 378999999874 32348999999 999999998554 555565 8999999999985432110
Q ss_pred --c-c----cCCCc---EEEECCcccCCccccceeEEEEe---CHHHHHHHHHHhHhhC----CCccHHHHHHHHHhhHH
Q 013019 343 --A-L----SLGAD---LVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHVLG----GALNPNAAYLIIRGMKT 405 (451)
Q Consensus 343 --p-l----~~GaD---iVv~S~SK~l~G~gdv~gG~Iv~---~~eli~~lr~~~~~~G----~~ls~~~a~l~lrgL~t 405 (451)
+ . ...-+ +++.|+||.++.+| .++|++++ +++++++++..+.... ..++...+..+...++.
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 316 (418)
T 3rq1_A 238 VRAFFNKFSHLPKEILTCVCYSLSKGFTMYG-QRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVAD 316 (418)
T ss_dssp HHGGGGGGTTCCTTEEEEEEEESTTTTTCCS-SCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCCceEEEEEeCCCCCcCcC-CcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCC
Confidence 1 1 11223 78899999998776 56788888 8999988877654321 23455554444433322
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHHcC
Q 013019 406 ----------LHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 406 ----------l~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+....++..++.+.+.+.|+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (418)
T 3rq1_A 317 PAKFKEYEAERNCYYQLIRDRADIFKQEAAQV 348 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1122345566777788888765
No 137
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.84 E-value=1.3e-19 Score=183.65 Aligned_cols=228 Identities=12% Similarity=0.096 Sum_probs=164.5
Q ss_pred CccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc-------cCCCeEEEcCCCCcchHHH--------
Q 013019 201 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV-------PAGGHIVTTTDCYRKTRIF-------- 265 (451)
Q Consensus 201 ~~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all-------~~GD~VIv~~~~Y~~t~~~-------- 265 (451)
.+.|+++.++...+|+++|++++|.++++++++|++|+..++..+. .+||+|++.++.|.+....
T Consensus 69 ~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~ 148 (395)
T 3nx3_A 69 LHTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANE 148 (395)
T ss_dssp SCCCTTSBCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCH
T ss_pred cccccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCc
Confidence 4556778899999999999999998889999999999999988775 3479999999999764321
Q ss_pred -HHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCC--
Q 013019 266 -IETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-- 338 (451)
Q Consensus 266 -l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~-- 338 (451)
+...+...+.++..++..|+++|++++++ ++++|+++.++|++|.+.+ +++|.++|++||++||+||++...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~ 227 (395)
T 3nx3_A 149 KYQKPFKPLISGVKFAKYNDISSVEKLVNE-KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGR 227 (395)
T ss_dssp HHHGGGCSCCSCEEEECTTCHHHHHTTCCT-TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTT
T ss_pred ccccccCCCCCCcEEeCCCCHHHHHHhccC-CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCc
Confidence 11222334456777888899999999986 4999999999999998876 999999999999999999997632
Q ss_pred ----CccccccCCCcEEEECCcccCCccccceeEEEEeCHHH-HHHHHHHhHhhCCCccHHHHHHHHHhhHHHH--HHHH
Q 013019 339 ----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQ 411 (451)
Q Consensus 339 ----~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~el-i~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~--~Rl~ 411 (451)
..........|++ +++|.+++ | .++|++++++++ ++.++..........++..+..++..++.+. ..++
T Consensus 228 ~g~~~~~~~~~~~~d~~--t~sK~~~~-G-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~ 303 (395)
T 3nx3_A 228 SGKFFAYEHAQILPDIM--TSAKALGC-G-LSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILE 303 (395)
T ss_dssp TSSSSGGGGGTCCCSEE--EECGGGTT-T-SCCEEEEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHH
T ss_pred CCcchhHHhcCCCCCEE--EecccccC-C-CceEEEEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHH
Confidence 1122223345655 57899986 4 578999999988 7776544322233456777666666665442 2244
Q ss_pred HHHHHHHHHHHHH----HcCCCeEEE
Q 013019 412 QQNSTALRMAEIL----EAHPKVLLL 433 (451)
Q Consensus 412 ~~~~nA~~Lae~L----~~~p~V~~V 433 (451)
+..++.+.+.+.| .++|.+..+
T Consensus 304 ~~~~~~~~~~~~l~~~~~~~~~~~~~ 329 (395)
T 3nx3_A 304 NVNKLTPYLEQSLDELINEFDFCKKR 329 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 4445555555544 346666544
No 138
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.84 E-value=7.9e-20 Score=188.14 Aligned_cols=215 Identities=13% Similarity=0.099 Sum_probs=152.3
Q ss_pred HHHHHHHHHhhh--------CCCcEEEeCCHHHHHHHHHHHHccCCC--------------eEEEc-CCCCcchHHHHH-
Q 013019 212 TVVVEEKMSALE--------GAESTVIMASGMSASTVMLLALVPAGG--------------HIVTT-TDCYRKTRIFIE- 267 (451)
Q Consensus 212 ~~~Lee~LA~l~--------gae~~vv~sSG~aAi~~al~all~~GD--------------~VIv~-~~~Y~~t~~~l~- 267 (451)
...|+++|++++ +.++.+++++|++|+.+++.+++++|| +|+++ +|.|..+.....
T Consensus 85 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~ 164 (444)
T 3if2_A 85 DSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVE 164 (444)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSS
T ss_pred CHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccc
Confidence 567888888876 236788888888999999999999998 78876 888987543210
Q ss_pred -HhhhcCCcEEEEeC----------CCCHHHHHHh---hcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEE
Q 013019 268 -TVLPKMGITATVID----------PADMEGLEAA---LNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVC 330 (451)
Q Consensus 268 -~~l~~~Gi~v~~vd----------~~D~d~Le~a---i~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lV 330 (451)
..+...|..+..++ ..|+++|+++ +++ ++++|++++|+||||.+++ +++|.++|++||++||
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li 243 (444)
T 3if2_A 165 GQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEG-RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLI 243 (444)
T ss_dssp SCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTT-CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEE
T ss_pred cchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCC-CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEE
Confidence 02344566665554 2589999998 565 4999999999999999998 8889999999999999
Q ss_pred EecCCCCCCcc------ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH
Q 013019 331 IDGTFATPLNQ------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (451)
Q Consensus 331 VD~tfa~~~~~------~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~ 404 (451)
+|++|+.+... .+...+.++++.|+||+ +++| .++|+++++++++++++......+...++..+..+...++
T Consensus 244 ~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G-~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 321 (444)
T 3if2_A 244 IDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI-GLPG-MRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVA 321 (444)
T ss_dssp EECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT-TCGG-GCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHH
T ss_pred EECCCCCcccccccccccccCCCCEEEEechhhc-cCCC-CceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHHH
Confidence 99998753211 11123678999999997 5454 5789999999999998877665544444444443333222
Q ss_pred H------HHH-HHHHHHHHHHHHHHHHHc-CCC
Q 013019 405 T------LHL-RVQQQNSTALRMAEILEA-HPK 429 (451)
Q Consensus 405 t------l~~-Rl~~~~~nA~~Lae~L~~-~p~ 429 (451)
. +.. ..+...++.+.+.+.|.+ .+.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 354 (444)
T 3if2_A 322 NDRIKQLSDNEIKPFYQKQATLAVKLLKQALGD 354 (444)
T ss_dssp TSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSS
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 1 111 223445566677777765 343
No 139
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.83 E-value=2e-19 Score=178.53 Aligned_cols=204 Identities=13% Similarity=0.125 Sum_probs=152.9
Q ss_pred CCCchhHHHHHHHHHhhhC---C--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 206 RYGNPTTVVVEEKMSALEG---A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~g---a--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
+|+++...+|+++|+++++ . ++.+++++|++++..++.++ ||+|+++ |.|.+.... +...|.++..+
T Consensus 52 ~y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~---gd~Vl~~-p~y~~~~~~----~~~~g~~~~~v 123 (335)
T 1uu1_A 52 IYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF---DRSVFFP-PTYSCYRIF----AKAVGAKFLEV 123 (335)
T ss_dssp SCCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS---SEEEECS-SSCHHHHHH----HHHHTCEEEEC
T ss_pred cCCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh---CCcEEEC-CCcHHHHHH----HHHcCCeEEEe
Confidence 3455557889999999998 4 45666677779999998887 9999999 999886543 34567887777
Q ss_pred CCC-----CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc---cc-cccCCCcEE
Q 013019 281 DPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---QK-ALSLGADLV 351 (451)
Q Consensus 281 d~~-----D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~---~~-pl~~GaDiV 351 (451)
+.. |+++| + ++++|++++|+||||.+.+.++|.++++..| ++|+|++|+.... .. ....+.+++
T Consensus 124 ~~~~~~~~d~~~l-----~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~ 196 (335)
T 1uu1_A 124 PLTKDLRIPEVNV-----G-EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAV 196 (335)
T ss_dssp CCCTTSCCCCCCC-----C-TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEE
T ss_pred ccCCCCCCCHHHc-----C-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEE
Confidence 542 34433 3 4899999999999999999999999999889 9999999863211 11 112456899
Q ss_pred EECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHcC
Q 013019 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 352 v~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~---tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+.|+||.++.+| .+.|+++++++++++++.....+ ..++..++.+...|+ .+..+.++..++++.+.+.|+++
T Consensus 197 ~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 272 (335)
T 1uu1_A 197 IRTFSKAFSLAA-QRVGYVVASEKFIDAYNRVRLPF--NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM 272 (335)
T ss_dssp EEESTTTTTCGG-GCCEEEEECHHHHHHHHHHSCTT--CSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecchhhcCCcc-cCeEEEEeCHHHHHHHHHhcCCC--CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999998665 56899999999999888765443 455665555544443 35556677778888899999876
No 140
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.83 E-value=1.9e-19 Score=184.14 Aligned_cols=190 Identities=11% Similarity=0.109 Sum_probs=142.4
Q ss_pred hhHHHHHHHHHhhhCC--CcEEEeCCHHHHHH--HHHHHHcc--C---------CCeEEEcCCCCcchHHHHHHhhhcCC
Q 013019 210 PTTVVVEEKMSALEGA--ESTVIMASGMSAST--VMLLALVP--A---------GGHIVTTTDCYRKTRIFIETVLPKMG 274 (451)
Q Consensus 210 pt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~--~al~all~--~---------GD~VIv~~~~Y~~t~~~l~~~l~~~G 274 (451)
+...+|+++|+++++. ++.+++++|++++. .++.+++. + ||+|++++|.|.++...+ ...|
T Consensus 70 ~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g 145 (423)
T 3ez1_A 70 AGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLL----QTLG 145 (423)
T ss_dssp TCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHH----HHHT
T ss_pred CChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHH----HHcC
Confidence 3467899999999986 45555666668997 88888887 7 599999999998866443 4457
Q ss_pred cEEEEeCC----CCHHHHHHhhc-CCCeEEEEEe-CCCCCccccccHH---HHHHHH-HhcCCEEEEecCCCCCCcc---
Q 013019 275 ITATVIDP----ADMEGLEAALN-NNNVSLFFTE-SPTNPFLRCVDVK---LVSDLC-HKKGAIVCIDGTFATPLNQ--- 341 (451)
Q Consensus 275 i~v~~vd~----~D~d~Le~ai~-~~~tklV~le-sPsNPtG~v~DL~---~IaelA-~~~g~~lVVD~tfa~~~~~--- 341 (451)
.++..++. .|+++|+++++ ..++++|++. +|+||||.+++.+ +|+++| +++|+++|+|++|......
T Consensus 146 ~~~~~v~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~ 225 (423)
T 3ez1_A 146 FELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEED 225 (423)
T ss_dssp CEEEEEEEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSS
T ss_pred CEEEeccCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCC
Confidence 77666543 48999999994 2359999865 8999999999866 888888 8999999999998742111
Q ss_pred -----ccc-------cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH
Q 013019 342 -----KAL-------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT 405 (451)
Q Consensus 342 -----~pl-------~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t 405 (451)
... ..+.++++.|+||. .++| .++|+++++++++++++......+...++..++.+...++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 299 (423)
T 3ez1_A 226 RAEPVNFVVLARDAGYPDRAFVFASTSKI-TFAG-AGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTE 299 (423)
T ss_dssp CCCCCCHHHHHHHHTCTTSEEEEEESTTT-SCSS-SSCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHH
T ss_pred CCCCcchhhhhhccCCCCeEEEEeCchhh-ccCC-cceEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHh
Confidence 111 23567999999997 3333 46899999999999998887776666777766655544443
No 141
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.83 E-value=6.9e-19 Score=182.82 Aligned_cols=217 Identities=13% Similarity=0.103 Sum_probs=152.6
Q ss_pred hhHHHHHHHHHhhh-CCC-------cEEE--eCCHHHHHHH--HHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEE
Q 013019 210 PTTVVVEEKMSALE-GAE-------STVI--MASGMSASTV--MLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (451)
Q Consensus 210 pt~~~Lee~LA~l~-gae-------~~vv--~sSG~aAi~~--al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v 277 (451)
+....|++.+++++ |.+ +.++ +++|++|+.. .+.+++.+||+|++++|.|......+...++..|.++
T Consensus 94 ~G~~~lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v 173 (448)
T 3meb_A 94 AGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPY 173 (448)
T ss_dssp TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCC
T ss_pred cchHHHHHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeE
Confidence 44567888888886 643 4555 6777799876 5667788999999999999987765543333667766
Q ss_pred EEeCC---C-----CHHHHHHhhcC--CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc--
Q 013019 278 TVIDP---A-----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-- 342 (451)
Q Consensus 278 ~~vd~---~-----D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~-- 342 (451)
..++. . |+++|++++++ .++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 174 ~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~ 253 (448)
T 3meb_A 174 KEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFE 253 (448)
T ss_dssp EEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHH
T ss_pred EEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcc
Confidence 66543 2 88999999874 24789999999999999986 5569999999999999999987543221
Q ss_pred ----cc----cCCC-cEEEECCcccCCccccceeEEE--Ee---------CH----HHHHHHHHHhHhhCCCccHHHHHH
Q 013019 343 ----AL----SLGA-DLVLHSATKFIGGHNDVLAGSI--SG---------SG----KLVTQIRNLHHVLGGALNPNAAYL 398 (451)
Q Consensus 343 ----pl----~~Ga-DiVv~S~SK~l~G~gdv~gG~I--v~---------~~----eli~~lr~~~~~~G~~ls~~~a~l 398 (451)
++ ..+. .+++.|+||.++.+| .+.|++ ++ ++ ++++.++..........+...++.
T Consensus 254 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a 332 (448)
T 3meb_A 254 ADAFAVRMFVDAGVEVLVAQSFSKNFGLYG-ERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYI 332 (448)
T ss_dssp HHTHHHHHHHHTTCCEEEEEECTTTSCCGG-GCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHH
T ss_pred cCchhHHHHhhcCCcEEEEecccccCCCcc-ccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHH
Confidence 11 2233 477999999999776 456776 55 44 555666554444444455555554
Q ss_pred HHHhh----------HHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 399 IIRGM----------KTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 399 ~lrgL----------~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+...| +.+....++..++.+.+.+.|+++
T Consensus 333 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 371 (448)
T 3meb_A 333 VQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR 371 (448)
T ss_dssp HHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44333 224445566777888888889876
No 142
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.83 E-value=1.1e-19 Score=187.50 Aligned_cols=212 Identities=12% Similarity=0.089 Sum_probs=146.8
Q ss_pred hhHHHHHHHHHhhh----CC--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE-------
Q 013019 210 PTTVVVEEKMSALE----GA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT------- 276 (451)
Q Consensus 210 pt~~~Lee~LA~l~----ga--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~------- 276 (451)
+...+|+++|++++ +. ++.+++++|++++..+ .+++++||+|++++|.|.+....+. ..|.+
T Consensus 111 ~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~g~~~~~~ 185 (449)
T 3qgu_A 111 QGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSV----MMGMTGDHNGTG 185 (449)
T ss_dssp TCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHH----HHTCSCCBCSSS
T ss_pred CCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHH----HcCCcccccccc
Confidence 44678999999987 33 5566666667888887 8889999999999999998765443 33444
Q ss_pred ---EEEeCCCCHHHHHHhhcC-CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-----ccc
Q 013019 277 ---ATVIDPADMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL 344 (451)
Q Consensus 277 ---v~~vd~~D~d~Le~ai~~-~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~-----~pl 344 (451)
+..++..+.+.+...+.+ .++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... ...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~ 265 (449)
T 3qgu_A 186 FDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIY 265 (449)
T ss_dssp BTTEEEEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGG
T ss_pred cceeEEEecccccCCcCChhHcCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHh
Confidence 555543321111111211 24899999999999999985 788889999999999999998652211 111
Q ss_pred c----CCCcEEEECCcccCCccccceeEEEEeCHHHHH--------HHHHHhHhhCCCccHHHHHHHHHhh-----HHHH
Q 013019 345 S----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVT--------QIRNLHHVLGGALNPNAAYLIIRGM-----KTLH 407 (451)
Q Consensus 345 ~----~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~--------~lr~~~~~~G~~ls~~~a~l~lrgL-----~tl~ 407 (451)
. .+.++++.|+||.++.+| .+.|++++++++++ .+...........++..+..+...+ +.+.
T Consensus 266 ~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 344 (449)
T 3qgu_A 266 EIPGADEVAIETCSFSKYAGFTG-VRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMN 344 (449)
T ss_dssp GSTTGGGTEEEEEECSGGGTCTT-CCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHH
T ss_pred hccCCCCcEEEEecchhhcCCcc-ceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHH
Confidence 1 245799999999998555 46899999887765 3444333333345555554444333 3455
Q ss_pred HHHHHHHHHHHHHHHHHHcC
Q 013019 408 LRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 408 ~Rl~~~~~nA~~Lae~L~~~ 427 (451)
...++..++.+.+.+.|+++
T Consensus 345 ~~~~~~~~~~~~l~~~L~~~ 364 (449)
T 3qgu_A 345 AMIKFYKENAQILKTTFTEM 364 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHC
Confidence 66677788899999999886
No 143
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.83 E-value=3e-19 Score=181.33 Aligned_cols=216 Identities=16% Similarity=0.108 Sum_probs=146.2
Q ss_pred chhHHHHH----HHHHhhhCCCcE-EEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHH-hhhcCCcEEEEeCC
Q 013019 209 NPTTVVVE----EKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVIDP 282 (451)
Q Consensus 209 npt~~~Le----e~LA~l~gae~~-vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~-~l~~~Gi~v~~vd~ 282 (451)
++..+.++ +++++++|.+.. +++++|++|+..++.+++++||+|+++++.|.+....... .....++.+..++.
T Consensus 66 ~~~~~~~~~~~~~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 145 (417)
T 3n0l_A 66 CEFVDEIETLAIERCKKLFNCKFANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGV 145 (417)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECC
T ss_pred chHHHHHHHHHHHHHHHHhCCCCcceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccC
Confidence 34444454 488999998665 8899999999999999999999999999999875432111 11123344444432
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-----cccccCCCcEEE
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVL 352 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-----~~pl~~GaDiVv 352 (451)
.|+++|++++++.++++|++++|+| |.+.|+++|.++|++||+++|+|+++..+.. ..++. ++|+++
T Consensus 146 ~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~ 222 (417)
T 3n0l_A 146 ELDGRIDYEKVREIAKKEKPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-YAHVVS 222 (417)
T ss_dssp CTTSSCCHHHHHHHHHHHCCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-TCSEEE
T ss_pred CCCCCcCHHHHHHHHHhcCCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-cceEEE
Confidence 5899999999733489999887775 8899999999999999999999999643211 12222 479999
Q ss_pred ECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhC-CCccHHH--H-HHHHHh--hHHHHHHHHHHHHHHHHHHHHHH
Q 013019 353 HSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-GALNPNA--A-YLIIRG--MKTLHLRVQQQNSTALRMAEILE 425 (451)
Q Consensus 353 ~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G-~~ls~~~--a-~l~lrg--L~tl~~Rl~~~~~nA~~Lae~L~ 425 (451)
.|+||+++|+. +|+++++ ++++++++....... ....... + ...+.. .+.+..+.++..++++.+.+.|+
T Consensus 223 ~s~sK~l~g~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 299 (417)
T 3n0l_A 223 STTHKTLRGPR---GGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLM 299 (417)
T ss_dssp EESSTTTCSCS---CEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeCccccCCCC---eeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999997764 7999998 788888876543221 1222221 1 111211 24456677788888999999998
Q ss_pred cCCCeE
Q 013019 426 AHPKVL 431 (451)
Q Consensus 426 ~~p~V~ 431 (451)
+ .++.
T Consensus 300 ~-~g~~ 304 (417)
T 3n0l_A 300 D-RKFK 304 (417)
T ss_dssp H-TTCE
T ss_pred h-CCce
Confidence 7 4443
No 144
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.83 E-value=1.3e-19 Score=183.40 Aligned_cols=217 Identities=15% Similarity=0.135 Sum_probs=156.9
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcchHH-HHHHh-hh-------cC
Q 013019 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRI-FIETV-LP-------KM 273 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t~~-~l~~~-l~-------~~ 273 (451)
|..+...+++++|+++++ .++++++++|++|+..++.++. .+||+||+.++.|.+... .+... .. ..
T Consensus 84 ~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~ 163 (395)
T 1vef_A 84 LPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPL 163 (395)
T ss_dssp SCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSC
T ss_pred cCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCC
Confidence 467889999999999995 4677888899999999998764 679999999999866432 32210 00 11
Q ss_pred CcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCCC-c-----ccc
Q 013019 274 GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL-N-----QKA 343 (451)
Q Consensus 274 Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~~-~-----~~p 343 (451)
..++..++..|+++|++++++ ++++|+++.++||||.+.+ +++|.++|+++|++||+|++|+... . ...
T Consensus 164 ~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~ 242 (395)
T 1vef_A 164 VEPVEFIPYNDVEALKRAVDE-ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEH 242 (395)
T ss_dssp SSCEEEECTTCHHHHHHHCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHH
T ss_pred CCCeeEeCCCcHHHHHHHhcc-CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhh
Confidence 112555566799999999986 4999999877899999888 9999999999999999999987321 1 122
Q ss_pred ccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHH--HHHHHHHHHHHHH
Q 013019 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMA 421 (451)
Q Consensus 344 l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~~La 421 (451)
...+.|++ |++|++++ | .+.|+++++++++++++..........++..++.+...++.+.. ..++..++++.+.
T Consensus 243 ~~~~~d~~--s~sK~~~~-g-~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~ 318 (395)
T 1vef_A 243 FGIVPDIL--TLAKALGG-G-VPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFM 318 (395)
T ss_dssp HTCCCSEE--EECGGGGT-T-SSCEEEEEEHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred cCCCCCEE--EEcccccC-C-CceEEEEehHHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 23457876 78999997 4 46788888888777665421112234567766666666665542 3566677888888
Q ss_pred HHHHcCC
Q 013019 422 EILEAHP 428 (451)
Q Consensus 422 e~L~~~p 428 (451)
+.|++.+
T Consensus 319 ~~l~~~~ 325 (395)
T 1vef_A 319 EKLRAIP 325 (395)
T ss_dssp HHHHTSC
T ss_pred HHHHHhh
Confidence 8888764
No 145
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.83 E-value=1.5e-19 Score=185.71 Aligned_cols=215 Identities=12% Similarity=0.076 Sum_probs=151.4
Q ss_pred CCCchh-HHHHHHHHHhhhCCC-cEEEeCCH-HHHH--HHHHHHHccC------------CCeEEEcCCCCcchHHHHHH
Q 013019 206 RYGNPT-TVVVEEKMSALEGAE-STVIMASG-MSAS--TVMLLALVPA------------GGHIVTTTDCYRKTRIFIET 268 (451)
Q Consensus 206 R~~npt-~~~Lee~LA~l~gae-~~vv~sSG-~aAi--~~al~all~~------------GD~VIv~~~~Y~~t~~~l~~ 268 (451)
+|+.+. ...|++.|+++++.+ +.+++++| ++++ .+++.++.++ ||+|++++|+|.+....+
T Consensus 71 ~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~-- 148 (422)
T 3d6k_A 71 NYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTIT-- 148 (422)
T ss_dssp SSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHH--
T ss_pred CCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHH--
Confidence 455544 678999999999863 44555555 5776 5666777666 347999999999876443
Q ss_pred hhhcCCcEEEEeCC----CCHHHHHHhhcCCCeEEEE-EeCCCCCccccccHH---HHHHHHH-hcCCEEEEecCCCC--
Q 013019 269 VLPKMGITATVIDP----ADMEGLEAALNNNNVSLFF-TESPTNPFLRCVDVK---LVSDLCH-KKGAIVCIDGTFAT-- 337 (451)
Q Consensus 269 ~l~~~Gi~v~~vd~----~D~d~Le~ai~~~~tklV~-lesPsNPtG~v~DL~---~IaelA~-~~g~~lVVD~tfa~-- 337 (451)
+..|.++..++. .|+++|++++++.++++|+ +++|+||||.+.+.+ +|.++|+ ++|+++|+|++|..
T Consensus 149 --~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~ 226 (422)
T 3d6k_A 149 --EHFGFEMINVPMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHT 226 (422)
T ss_dssp --HHHTCEEEEEEEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCB
T ss_pred --HHcCCEEEecCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccc
Confidence 345777666543 4799999999764589988 789999999999866 7777787 89999999999863
Q ss_pred CCc----cccc--------cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH
Q 013019 338 PLN----QKAL--------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT 405 (451)
Q Consensus 338 ~~~----~~pl--------~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t 405 (451)
... ..++ ..+.++++.|+||+ +++| .+.|+++++++++++++......+...++..+..+...++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G-lriG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~ 304 (422)
T 3d6k_A 227 LSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAG-SGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGD 304 (422)
T ss_dssp SSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTT-SSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCS
T ss_pred cCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcc-cceEEEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhC
Confidence 211 1122 23567999999998 5555 57899999999999998877766656667666555544432
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHc
Q 013019 406 -------LHLRVQQQNSTALRMAEILEA 426 (451)
Q Consensus 406 -------l~~Rl~~~~~nA~~Lae~L~~ 426 (451)
+....+...++.+.+.+.|.+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 332 (422)
T 3d6k_A 305 VAGLKAHMLKHAASLAPKFERVLEILDS 332 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222233444566666666654
No 146
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.6e-19 Score=189.34 Aligned_cols=214 Identities=12% Similarity=0.100 Sum_probs=157.6
Q ss_pred HHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHHcc-----CC---CeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 213 VVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP-----AG---GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 213 ~~Lee~LA~l~gae----~~vv~sSG~aAi~~al~all~-----~G---D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
.++.+++++++|.+ ..+++++|++|+..++.++++ +| |+|+++.+.|.+... .+...|+++..+
T Consensus 110 ~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~----~~~~~G~~~~~v 185 (497)
T 3mc6_A 110 SEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDK----AAYYFGMKLRHV 185 (497)
T ss_dssp HHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHH----HHHHSCCEEEEE
T ss_pred HHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHH----HHHHcCCeEEEE
Confidence 35566678888865 577788888999999998865 56 899999999988653 345568888887
Q ss_pred CC------CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-------------cc
Q 013019 281 DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-------------NQ 341 (451)
Q Consensus 281 d~------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-------------~~ 341 (451)
+. .|+++|+++++++ +++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+. ..
T Consensus 186 ~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~ 264 (497)
T 3mc6_A 186 ELDPTTYQVDLGKVKKFINKN-TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLL 264 (497)
T ss_dssp CBCTTTCSBCTTTTGGGCCSS-EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCC
T ss_pred ecCcccCcCCHHHHHHHHhhC-CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccc
Confidence 53 3588999999875 9999999999999999999999999999999999999987321 12
Q ss_pred ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh-H-hhCCC----------cc--HHHHHHHHHhh--HH
Q 013019 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-H-VLGGA----------LN--PNAAYLIIRGM--KT 405 (451)
Q Consensus 342 ~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-~-~~G~~----------ls--~~~a~l~lrgL--~t 405 (451)
.....|+|+++.|++|++.++. .+|+++.+++.+.+..... . ..+.. .. ...+|.+++.+ ..
T Consensus 265 ~~~~~g~d~~~~s~~K~l~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~ 342 (497)
T 3mc6_A 265 DFRVPGVTSISCDTHKYGFAPK--GSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENG 342 (497)
T ss_dssp STTSTTCCEEEEETTTTTCCCS--SCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcEEEECchhhcCCCC--CceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHH
Confidence 2334589999999999975553 3688887766544332111 1 11110 00 33355555544 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHc-CCCeEEE
Q 013019 406 LHLRVQQQNSTALRMAEILEA-HPKVLLL 433 (451)
Q Consensus 406 l~~Rl~~~~~nA~~Lae~L~~-~p~V~~V 433 (451)
+..++++..++++.+.+.|++ .|+++.+
T Consensus 343 ~~~~~~~~~~~~~~l~~~L~~~~~g~~~~ 371 (497)
T 3mc6_A 343 YIESCQEIVGAAMKFKKYIQENIPDLDIM 371 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 566788888999999999999 5887654
No 147
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.83 E-value=2.8e-19 Score=181.78 Aligned_cols=215 Identities=13% Similarity=0.142 Sum_probs=149.8
Q ss_pred hhHHHHHHHHHhhh------C--CCcEEEeCCHHHHHHHHHHHHccCCC-----eEEEc-CCCCcchHHHHHH--hhhcC
Q 013019 210 PTTVVVEEKMSALE------G--AESTVIMASGMSASTVMLLALVPAGG-----HIVTT-TDCYRKTRIFIET--VLPKM 273 (451)
Q Consensus 210 pt~~~Lee~LA~l~------g--ae~~vv~sSG~aAi~~al~all~~GD-----~VIv~-~~~Y~~t~~~l~~--~l~~~ 273 (451)
.....|+++|++++ + .++.+++++|++|+..++.+++++|| +|+++ .|.|.+....... .+...
T Consensus 75 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~ 154 (417)
T 3g7q_A 75 QGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSA 154 (417)
T ss_dssp TSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEEC
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccc
Confidence 34667888888876 2 25777788888999999999999988 89997 8999875533211 12233
Q ss_pred CcEEEEeCC------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc----
Q 013019 274 GITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN---- 340 (451)
Q Consensus 274 Gi~v~~vd~------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~---- 340 (451)
+..+..++. .|+++|+ +++ ++++|++++|+||||.+++ +++|.++|++||+++|+|++|+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~--~~~-~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~ 231 (417)
T 3g7q_A 155 RPNIELLPEGQFKYHVDFEHLH--IGE-ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIF 231 (417)
T ss_dssp CCEEEEEGGGEEEEECCGGGCC--CCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBC
T ss_pred cCcccccCCcccccccCHHHhc--ccc-CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccc
Confidence 455544432 3777777 555 4999999999999999998 88999999999999999999975321
Q ss_pred --cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH------HHH-HHH
Q 013019 341 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHL-RVQ 411 (451)
Q Consensus 341 --~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t------l~~-Rl~ 411 (451)
..+...+.++++.|+||+ +++| .++|+++++++++++++......+...++..+..+...++. +.. ..+
T Consensus 232 ~~~~~~~~~~~i~~~s~sK~-~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 309 (417)
T 3g7q_A 232 SEARPLWNPNIILCMSLSKL-GLPG-SRCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKP 309 (417)
T ss_dssp SCCCCCCCTTEEEEEESGGG-TCTT-SCCEEEECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHH
T ss_pred cccccCCCCCEEEEEechhc-cCCC-cceEEEEeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHH
Confidence 112234678999999994 5555 67899999999999998877766655555555444433321 111 223
Q ss_pred HHHHHHHHHHHHHHc-CCC
Q 013019 412 QQNSTALRMAEILEA-HPK 429 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~-~p~ 429 (451)
+..++.+.+.+.|++ .+.
T Consensus 310 ~~~~~~~~~~~~l~~~l~~ 328 (417)
T 3g7q_A 310 FYYQRVQQTIAIIRRYLSE 328 (417)
T ss_dssp HHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 445666777777766 343
No 148
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.83 E-value=2.2e-19 Score=177.90 Aligned_cols=222 Identities=14% Similarity=0.054 Sum_probs=158.8
Q ss_pred ccccCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEE
Q 013019 202 FEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~ 279 (451)
|.+++...+..+++++++++++|.+ +.+++++|++|+..++.+++++||+|+++++.|.+.... ..+...|+++..
T Consensus 41 ~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~--~~~~~~g~~~~~ 118 (359)
T 1svv_A 41 QHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEAVIATQLGHISTHET--GAIEATGHKVVT 118 (359)
T ss_dssp CCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEEEEEETTSHHHHSST--THHHHTTCCEEE
T ss_pred ccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHhCCCCEEEEcccchHHHHHH--HHHhcCCCeeEE
Confidence 5555566788999999999999863 467778888999999999999999999999999876531 024556888887
Q ss_pred eCCC----CHHHHHHhhcCC------CeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCC---CCC---Cc
Q 013019 280 IDPA----DMEGLEAALNNN------NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTF---ATP---LN 340 (451)
Q Consensus 280 vd~~----D~d~Le~ai~~~------~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tf---a~~---~~ 340 (451)
++.. |+++|+++++++ ++++|++++| ||||.+.+ +++|.++|+++|+++|+|+++ +.+ ..
T Consensus 119 v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 197 (359)
T 1svv_A 119 APCPDGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVND 197 (359)
T ss_dssp ECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCC
T ss_pred EeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcc
Confidence 7643 589999998764 2899999999 79999998 899999999999999999997 211 11
Q ss_pred cccc--cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCC--ccHHHHHHHHHhh--HHHHHHHHHHH
Q 013019 341 QKAL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGM--KTLHLRVQQQN 414 (451)
Q Consensus 341 ~~pl--~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~--ls~~~a~l~lrgL--~tl~~Rl~~~~ 414 (451)
.+.+ ..+.|+++.|++|+.+.. ..|+++.+++++++++......+.. .+......+...+ ..+....++..
T Consensus 198 ~~~~~~~~~~d~~~~s~~K~g~~~---~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 274 (359)
T 1svv_A 198 LTLADIARLTDMFYIGATKAGGMF---GEALIILNDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSN 274 (359)
T ss_dssp CCHHHHHHHCSEEEEECTTTTCSS---CEEEEECSGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHH
T ss_pred hhhhhhhhcCCEEEEecccCCCCC---ceEEEEEcccHHHHHHHHHhcCCcccccchhhHHHHHHHHhhhhHHHHHHHHH
Confidence 1211 135799999999974332 3589998988887776543222221 1111111111122 22344566777
Q ss_pred HHHHHHHHHHHcCCCe
Q 013019 415 STALRMAEILEAHPKV 430 (451)
Q Consensus 415 ~nA~~Lae~L~~~p~V 430 (451)
++++.+.+.| +.+++
T Consensus 275 ~~~~~l~~~L-~~~~~ 289 (359)
T 1svv_A 275 KMAAILKAGL-EACGI 289 (359)
T ss_dssp HHHHHHHHHH-HHTTC
T ss_pred HHHHHHHHHh-ccCCe
Confidence 8888888888 55665
No 149
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.82 E-value=1.3e-19 Score=185.62 Aligned_cols=214 Identities=14% Similarity=0.136 Sum_probs=141.2
Q ss_pred hhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc--------cCCCeEEEcCCCCcch-------------HHHH
Q 013019 210 PTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKT-------------RIFI 266 (451)
Q Consensus 210 pt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all--------~~GD~VIv~~~~Y~~t-------------~~~l 266 (451)
+...+++++|++++|. ++.+++++|++|+..++.+++ ++||+|++..|.|.+. ...+
T Consensus 61 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~ 140 (432)
T 3a9z_A 61 DIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPL 140 (432)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHH
Confidence 4457899999999997 356666677899999998886 5898888877777542 2223
Q ss_pred HHhhhcCCcEEEEeCC------CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcC----------CEEE
Q 013019 267 ETVLPKMGITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG----------AIVC 330 (451)
Q Consensus 267 ~~~l~~~Gi~v~~vd~------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g----------~~lV 330 (451)
.......|.++..++. .|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++| +++|
T Consensus 141 ~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~li 219 (432)
T 3a9z_A 141 EHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPT-TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVH 219 (432)
T ss_dssp HHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTT-EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEE
T ss_pred HHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCC-ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEE
Confidence 3334556888888764 3789999999874 999999999999999999999999999999 9999
Q ss_pred EecCCCCCCcc-ccccCCCcEEEECCcccCCccccceeEEEEeCHHH-HHHHHHH-------hHhhCCCccHHHHHHHHH
Q 013019 331 IDGTFATPLNQ-KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNL-------HHVLGGALNPNAAYLIIR 401 (451)
Q Consensus 331 VD~tfa~~~~~-~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~el-i~~lr~~-------~~~~G~~ls~~~a~l~lr 401 (451)
+|++|+.+... .....+.|+++.|+||+++ + ++|++++++++ ..+++.. ......+.+....+.+..
T Consensus 220 vDea~~~~~~~~~~~~~~~d~~~~s~~K~~g-~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 295 (432)
T 3a9z_A 220 TDAAQALGKRRVDVEDLGVDFLTIVGHKFYG-P---RIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGK 295 (432)
T ss_dssp EECTTTTTTSCCCHHHHCCSEEEEEGGGTTC-C---SCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHH
T ss_pred EEchhhhCCcccChhhcCCCEEEEehhHhcC-C---cceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHH
Confidence 99998765321 2123578999999999874 4 27899888754 2222211 111112344444443333
Q ss_pred hhHH----HHHHHHHHHHHHHHHHHHHHcCC
Q 013019 402 GMKT----LHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 402 gL~t----l~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
.++. +....++..++++.+.+.|++.+
T Consensus 296 al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 326 (432)
T 3a9z_A 296 AADLVSENCETYEAHMRDIRDYLEERLEAEF 326 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4433 33345556677777878777643
No 150
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.82 E-value=5.7e-19 Score=186.77 Aligned_cols=215 Identities=15% Similarity=0.024 Sum_probs=158.7
Q ss_pred HHHHHHHhhhCCC-------cEEEeCCHHHHHHHHHHHHccC--------CC-----eEEEcCCCCcchHHHHHHhhhcC
Q 013019 214 VVEEKMSALEGAE-------STVIMASGMSASTVMLLALVPA--------GG-----HIVTTTDCYRKTRIFIETVLPKM 273 (451)
Q Consensus 214 ~Lee~LA~l~gae-------~~vv~sSG~aAi~~al~all~~--------GD-----~VIv~~~~Y~~t~~~l~~~l~~~ 273 (451)
+++++|++++|.+ .++++++|++|+..+++++..+ || +|+++.+.|.... ..+...
T Consensus 99 ~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~----~~~~~~ 174 (502)
T 3hbx_A 99 RCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWE----KFARYF 174 (502)
T ss_dssp HHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHH----HHHHHT
T ss_pred HHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHH----HHHHHc
Confidence 4556688888876 4556889999999998887665 87 8999999988754 345567
Q ss_pred CcEEEEeCC------CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc------CCEEEEecCCCCCC--
Q 013019 274 GITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATPL-- 339 (451)
Q Consensus 274 Gi~v~~vd~------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~------g~~lVVD~tfa~~~-- 339 (451)
|+++++++. .|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++ |+++++|++|+.+.
T Consensus 175 G~~~~~v~~~~~~~~~d~~~l~~~i~~~-t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p 253 (502)
T 3hbx_A 175 EVELKEVKLSEGYYVMDPQQAVDMVDEN-TICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAP 253 (502)
T ss_dssp TCEEEEECCBTTBCSCCHHHHHHHCCTT-EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHH
T ss_pred CceeEEEecCCCcCcCCHHHHHHHHhhC-CEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhh
Confidence 888888763 2899999999885 99999999999999999999999999999 99999999987432
Q ss_pred -ccccc-----cCCCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHH-HhHhhCCC------------ccHHHHHHH
Q 013019 340 -NQKAL-----SLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRN-LHHVLGGA------------LNPNAAYLI 399 (451)
Q Consensus 340 -~~~pl-----~~GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~-~~~~~G~~------------ls~~~a~l~ 399 (451)
..... ..++|++..|++|++.++. .+|+++. +++++..... ...+++.. ......|.+
T Consensus 254 ~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~--g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~a 331 (502)
T 3hbx_A 254 FLYPELEWDFRLPLVKSINVSGHKYGLVYA--GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (502)
T ss_dssp HHCTTCCCSTTSTTEEEEEEETTTTTCCCS--SCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHH
T ss_pred hhCcccccccCCCCceEEEECcccccCCCC--CeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHH
Confidence 11111 2378999999999997665 2465554 4544422111 11122211 123445555
Q ss_pred HH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEec
Q 013019 400 IR--GMKTLHLRVQQQNSTALRMAEILEAHPKVLLLFI 435 (451)
Q Consensus 400 lr--gL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~y 435 (451)
++ +.+.+..+++++.++++.+++.|+++++++.+..
T Consensus 332 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (502)
T 3hbx_A 332 LIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSK 369 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 54 4567788899999999999999999998866543
No 151
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.82 E-value=2.7e-19 Score=187.46 Aligned_cols=213 Identities=19% Similarity=0.212 Sum_probs=157.0
Q ss_pred hHHHHHHHHHhhhCCCcEEEe-CCHHHHHHHHHHHH----ccCCC-----eEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 211 TTVVVEEKMSALEGAESTVIM-ASGMSASTVMLLAL----VPAGG-----HIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 211 t~~~Lee~LA~l~gae~~vv~-sSG~aAi~~al~al----l~~GD-----~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
...++++++++++|.+..+++ ++|++|+.++++++ .++|| +|+++++.|+.+... +...|+++..+
T Consensus 108 l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~----~~~~G~~vv~v 183 (474)
T 1wyu_B 108 LMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPAT----ASMAGYQVREI 183 (474)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHH----HHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHH----HHHCCCEEEEe
Confidence 367789999999998766655 67778888766554 36888 999999999876643 45678888888
Q ss_pred CCC-----CHHHHHHhhcCCCeEEEEEeCCCCCcccc-ccHHHHHHHHHhcCCEEEEecCCCCCC--ccccccCCCcEEE
Q 013019 281 DPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVL 352 (451)
Q Consensus 281 d~~-----D~d~Le~ai~~~~tklV~lesPsNPtG~v-~DL~~IaelA~~~g~~lVVD~tfa~~~--~~~pl~~GaDiVv 352 (451)
+.. |+++|+++++++ +++|++++| ||+|.+ .++++|.++|+++|+++|+|++++.+. ..++..+|+|+++
T Consensus 184 ~~~~~~~~d~~~L~~~i~~~-t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~ 261 (474)
T 1wyu_B 184 PSGPEGEVDLEALKRELGPH-VAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVH 261 (474)
T ss_dssp CBCTTSSBCHHHHHHHCSTT-EEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEE
T ss_pred cCCCCCCcCHHHHHHhhCCC-ceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEE
Confidence 753 899999999874 999999998 689998 699999999999999999999986443 2344566899999
Q ss_pred ECCcccCCcc---ccceeEEEEeCHHHHHHHHH-Hh------------------HhhCCCccHHH---HHHHHH--hhHH
Q 013019 353 HSATKFIGGH---NDVLAGSISGSGKLVTQIRN-LH------------------HVLGGALNPNA---AYLIIR--GMKT 405 (451)
Q Consensus 353 ~S~SK~l~G~---gdv~gG~Iv~~~eli~~lr~-~~------------------~~~G~~ls~~~---a~l~lr--gL~t 405 (451)
.|+||+++++ |...+|++++++++++++.. .. .......+... ++..++ +.+.
T Consensus 262 ~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~ 341 (474)
T 1wyu_B 262 LNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEG 341 (474)
T ss_dssp CCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHH
Confidence 9999999855 22457999999887766541 00 00001123322 222222 3445
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCe
Q 013019 406 LHLRVQQQNSTALRMAEILEAHPKV 430 (451)
Q Consensus 406 l~~Rl~~~~~nA~~Lae~L~~~p~V 430 (451)
+....++..++++.+.+.|++. ++
T Consensus 342 l~~~~~~~~~~~~~l~~~L~~~-g~ 365 (474)
T 1wyu_B 342 LKKAAALAVLNARYLKELLKEK-GY 365 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-Cc
Confidence 6666777888999999999886 54
No 152
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.82 E-value=1.1e-18 Score=177.64 Aligned_cols=215 Identities=14% Similarity=0.102 Sum_probs=150.8
Q ss_pred chhHHHHHHHHHhhh-C-------CCcEEE--eCCHHHHHHHHH--HHHccCC-----CeEEEcCCCCcchHHHHHHhhh
Q 013019 209 NPTTVVVEEKMSALE-G-------AESTVI--MASGMSASTVML--LALVPAG-----GHIVTTTDCYRKTRIFIETVLP 271 (451)
Q Consensus 209 npt~~~Lee~LA~l~-g-------ae~~vv--~sSG~aAi~~al--~all~~G-----D~VIv~~~~Y~~t~~~l~~~l~ 271 (451)
.+....|+++|++++ + .++.++ +++|++|+..++ ..++.+| |+|+++.+.|.+.... +.
T Consensus 73 ~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~----~~ 148 (412)
T 1ajs_A 73 ILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGV----FT 148 (412)
T ss_dssp TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHH----HH
T ss_pred CCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHH----HH
Confidence 344678999999887 4 256776 777889999885 3556899 9999999999986543 34
Q ss_pred cCCcE-EEEeCC-------CCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCC
Q 013019 272 KMGIT-ATVIDP-------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP 338 (451)
Q Consensus 272 ~~Gi~-v~~vd~-------~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~ 338 (451)
..|.+ +..++. .|+++|++++++ .++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...
T Consensus 149 ~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~ 228 (412)
T 1ajs_A 149 TAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGF 228 (412)
T ss_dssp HTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTT
T ss_pred HcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccc
Confidence 45666 665543 278999998864 14789999999999999865 678999999999999999997654
Q ss_pred Ccc----c--ccc----C-CCcEEEECCcccCCccccceeEEEEe---CHHH----HHHHHHHhHhhCCCccHHHHHHHH
Q 013019 339 LNQ----K--ALS----L-GADLVLHSATKFIGGHNDVLAGSISG---SGKL----VTQIRNLHHVLGGALNPNAAYLII 400 (451)
Q Consensus 339 ~~~----~--pl~----~-GaDiVv~S~SK~l~G~gdv~gG~Iv~---~~el----i~~lr~~~~~~G~~ls~~~a~l~l 400 (451)
... . ++. . ..++++.|+||.++++| .+.|++++ ++++ ++.++..........++..++.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 307 (412)
T 1ajs_A 229 ASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYN-ERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVA 307 (412)
T ss_dssp TTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHH
T ss_pred cCCcccccchHHHHHhccCCcEEEEEecccccCCCC-cceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHH
Confidence 221 1 121 1 23488999999999876 56788888 8874 444444332222233444444444
Q ss_pred HhhH----------HHHHHHHHHHHHHHHHHHHHHcCC
Q 013019 401 RGMK----------TLHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 401 rgL~----------tl~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
..|+ .+....++..++.+.+.+.|++++
T Consensus 308 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1ajs_A 308 RTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALK 345 (412)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3333 334455666778888888998764
No 153
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.82 E-value=7.1e-19 Score=181.84 Aligned_cols=210 Identities=19% Similarity=0.202 Sum_probs=153.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCC-cchHHHHHHhhhcCCcEEEEeCC----
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCY-RKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y-~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
.++...+|+++|+++++.++++++++|++|+..++.+++++|| +++.+.| +.+.. .+...|.++..++.
T Consensus 73 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~----~~~~~G~~~~~v~~~~~~ 146 (456)
T 2ez2_A 73 GSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRY----HQEKNGAVFVDIVRDEAH 146 (456)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHH----HHHHTTCEEEECBCGGGG
T ss_pred cChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHH----HHHHcCCEEEEecccccc
Confidence 4678899999999999999999999999999999999999999 7778888 54343 34456777776532
Q ss_pred -----------CCHHHHHHhhcCCC---eEEEEEeCCCC-Ccccccc---HHHHHHHHHhcCCEEEEecCCCCC------
Q 013019 283 -----------ADMEGLEAALNNNN---VSLFFTESPTN-PFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP------ 338 (451)
Q Consensus 283 -----------~D~d~Le~ai~~~~---tklV~lesPsN-PtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~------ 338 (451)
.|+++|+++++++. +++|++++|+| |+|.+.+ +++|.++|++||++||+|++++.+
T Consensus 147 ~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~ 226 (456)
T 2ez2_A 147 DAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIK 226 (456)
T ss_dssp CTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHH
T ss_pred cccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEcccccccccccc
Confidence 27899999997531 39999999999 9999887 999999999999999999997642
Q ss_pred -----Ccccc-------ccCCCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhh-C----CCcc--HHHHHH
Q 013019 339 -----LNQKA-------LSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVL-G----GALN--PNAAYL 398 (451)
Q Consensus 339 -----~~~~p-------l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~-G----~~ls--~~~a~l 398 (451)
+...+ .....|+++.|++|+++ .+ ++|++++ +++++++++..+... | ...+ ...+ +
T Consensus 227 ~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~-~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-~ 302 (456)
T 2ez2_A 227 EQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCL-VN--IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEA-M 302 (456)
T ss_dssp HHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTC-CS--SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHH-H
T ss_pred ccccccCCcchhhhhhhhcccCCEEEEeCcccCC-CC--ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHH-H
Confidence 22222 12346888889888865 33 4899998 688888887655432 1 1122 2222 1
Q ss_pred HHHhhHHH-HHHHHHHHHHHHHHHHHHHcC
Q 013019 399 IIRGMKTL-HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 399 ~lrgL~tl-~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+...++.+ ...+++..++++.+.+.|++.
T Consensus 303 a~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (456)
T 2ez2_A 303 AIGLREAMQYEYIEHRVKQVRYLGDKLKAA 332 (456)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHhcC
Confidence 22222333 345566667778888888763
No 154
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.82 E-value=4.2e-19 Score=182.29 Aligned_cols=212 Identities=11% Similarity=0.119 Sum_probs=145.5
Q ss_pred hhHHHHHHHHHhhh----CC--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCC---------
Q 013019 210 PTTVVVEEKMSALE----GA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--------- 274 (451)
Q Consensus 210 pt~~~Lee~LA~l~----ga--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~G--------- 274 (451)
+...+|+++|++++ +. ++.++++++++++.. +.+++++||+|++++|.|.+....+.. ....+
T Consensus 98 ~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~ 175 (432)
T 3ei9_A 98 QGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVI-MGQTGQFNTDVQKY 175 (432)
T ss_dssp TCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH-HHHHHCTTCCEEEEESCCTHHHHHHHH-HTCSCCEETTTTEE
T ss_pred CCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHH-HHHHcCCCCEEEEeCCCCHHHHHHHHH-cCCccccccccccc
Confidence 44578999999885 43 345555555578776 578889999999999999987665532 22222
Q ss_pred cEEEEeCCCCH----HHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----cc
Q 013019 275 ITATVIDPADM----EGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA 343 (451)
Q Consensus 275 i~v~~vd~~D~----d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~p 343 (451)
.++.+++..+. .++++ .+ ++++|++++|+||||.+.+ +++|+++|+++|++||+|++|+..... ..
T Consensus 176 ~~~~~~~~~~~~~~~~~l~~--~~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~ 252 (432)
T 3ei9_A 176 GNIEYMRCTPENGFFPDLST--VG-RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSI 252 (432)
T ss_dssp TTCEEEECCGGGTTSCCGGG--CC-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSG
T ss_pred CceEEeccCcccCCcCChhh--CC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCCh
Confidence 13334332211 12222 13 4899999999999999985 677788899999999999998743211 11
Q ss_pred cc----CCCcEEEECCcccCCccccceeEEEEeCHHH--------HHHHHHHhHhhCCCccHHHHHHHHH-----hhHHH
Q 013019 344 LS----LGADLVLHSATKFIGGHNDVLAGSISGSGKL--------VTQIRNLHHVLGGALNPNAAYLIIR-----GMKTL 406 (451)
Q Consensus 344 l~----~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~el--------i~~lr~~~~~~G~~ls~~~a~l~lr-----gL~tl 406 (451)
.. .+.++++.|+||.++.+| .+.|++++++++ ++.+...........++.....+.. +.+.+
T Consensus 253 ~~~~~~~~~~i~~~S~SK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 331 (432)
T 3ei9_A 253 FEIPGAEEVAMETASFSNYAGFTG-VRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAM 331 (432)
T ss_dssp GGSTTGGGTEEEEEESHHHHCTTT-TCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHH
T ss_pred hhcCCCCCeEEEEecchhccCCcc-cceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHH
Confidence 11 245799999999998666 568999998877 6777766554444455555443333 33456
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 013019 407 HLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 407 ~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
....++..++.+.+.+.|+++
T Consensus 332 ~~~~~~~~~~~~~l~~~L~~~ 352 (432)
T 3ei9_A 332 HKVIGFYKENTNIIIDTFTSL 352 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHC
Confidence 666778888999999999886
No 155
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.82 E-value=9.7e-19 Score=178.30 Aligned_cols=215 Identities=17% Similarity=0.160 Sum_probs=149.5
Q ss_pred chhHHHHHHHHHhhh-CCC-------cE--EEeCCHHHHHHHH---HHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc
Q 013019 209 NPTTVVVEEKMSALE-GAE-------ST--VIMASGMSASTVM---LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (451)
Q Consensus 209 npt~~~Lee~LA~l~-gae-------~~--vv~sSG~aAi~~a---l~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi 275 (451)
.+...+|++.+++++ |.+ +. +.+.+|++++..+ +.+++++||+|++++|.|.+.... ++..|.
T Consensus 78 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~g~ 153 (409)
T 4eu1_A 78 VTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESI----FAKAGM 153 (409)
T ss_dssp TTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHH----HHHTTC
T ss_pred CCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHH----HHHcCC
Confidence 344567888998865 432 23 3366777777654 345678999999999999987644 445688
Q ss_pred EEEEeCC-------CCHHHHHHhhc--CCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccc-
Q 013019 276 TATVIDP-------ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK- 342 (451)
Q Consensus 276 ~v~~vd~-------~D~d~Le~ai~--~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~- 342 (451)
++..++. .|+++|+++++ +++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~ 233 (409)
T 4eu1_A 154 ELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQL 233 (409)
T ss_dssp EEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCH
T ss_pred eEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCc
Confidence 8777753 27899999986 224678888999999999987 5569999999999999999987643221
Q ss_pred -----cc----cC-CCcEEEECCcccCCccccceeEEE---EeCHH----HHHHHHHHhHhhCCCccHHHHHHHHHhhH-
Q 013019 343 -----AL----SL-GADLVLHSATKFIGGHNDVLAGSI---SGSGK----LVTQIRNLHHVLGGALNPNAAYLIIRGMK- 404 (451)
Q Consensus 343 -----pl----~~-GaDiVv~S~SK~l~G~gdv~gG~I---v~~~e----li~~lr~~~~~~G~~ls~~~a~l~lrgL~- 404 (451)
++ .. ...+++.|+||.++.+| .+.|++ +++++ ++++++..........+...++.+...++
T Consensus 234 ~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 312 (409)
T 4eu1_A 234 DYDAFVPRHLVDMVPNLIVAQSFSKNFGLYG-HRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKD 312 (409)
T ss_dssp HHHTHHHHHHHTTSSCCEEEEECTTTSSCGG-GCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHhhCCcEEEEecCcccccCcc-CCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCC
Confidence 11 11 23488999999998776 456774 66777 55666655443334445555554443333
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHcCC
Q 013019 405 ---------TLHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 405 ---------tl~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
.+....++..++.+.+.+.|++.+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 345 (409)
T 4eu1_A 313 PQLTALWKKELKQMSSRIAEVRKRLVSELKACG 345 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 244456677788888999998764
No 156
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.82 E-value=3.5e-19 Score=184.92 Aligned_cols=214 Identities=13% Similarity=-0.023 Sum_probs=155.6
Q ss_pred HHHHHHHHHhhhCCC--c-----EEEeCCHHHHHHHHHHHHcc--------CC-----CeEEEcCCCCcchHHHHHHhhh
Q 013019 212 TVVVEEKMSALEGAE--S-----TVIMASGMSASTVMLLALVP--------AG-----GHIVTTTDCYRKTRIFIETVLP 271 (451)
Q Consensus 212 ~~~Lee~LA~l~gae--~-----~vv~sSG~aAi~~al~all~--------~G-----D~VIv~~~~Y~~t~~~l~~~l~ 271 (451)
.+++++++++++|.+ . ++++++|++|+..++.++.. +| ++|++++ .|.... ..+.
T Consensus 83 ~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~----~~~~ 157 (452)
T 2dgk_A 83 DLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWH----KFAR 157 (452)
T ss_dssp HHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHH----HHHH
T ss_pred HHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHH----HHHH
Confidence 345666678899874 2 67888889999999888764 55 5899988 776544 3445
Q ss_pred cCCcEEEEeCCC------CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc------CCEEEEecCCCCCC
Q 013019 272 KMGITATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATPL 339 (451)
Q Consensus 272 ~~Gi~v~~vd~~------D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~------g~~lVVD~tfa~~~ 339 (451)
..|++++.++.. |+++|+++|+++ |++|++++|+||||.+.|+++|.++|+++ |+++++|++|+.+.
T Consensus 158 ~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~-t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~ 236 (452)
T 2dgk_A 158 YWDVELREIPMRPGQLFMDPKRMIEACDEN-TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFL 236 (452)
T ss_dssp HTTCEEEECCCBTTBCSCCHHHHHHHCCTT-EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGT
T ss_pred HcCceEEEEecCCCCCeECHHHHHHHHhhC-CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHH
Confidence 678898888642 799999999875 99999999999999999999999999995 99999999987643
Q ss_pred c---cc--ccc---CCCcEEEECCcccCCccccceeEEEEeCH-HHH-HHHHHHhHhhCC----------Cc--cHHHHH
Q 013019 340 N---QK--ALS---LGADLVLHSATKFIGGHNDVLAGSISGSG-KLV-TQIRNLHHVLGG----------AL--NPNAAY 397 (451)
Q Consensus 340 ~---~~--pl~---~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~-eli-~~lr~~~~~~G~----------~l--s~~~a~ 397 (451)
. .. +.. .++|+++.|++|++.++. .+|+++.++ +++ +.+......++. .. .....|
T Consensus 237 ~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 314 (452)
T 2dgk_A 237 APFVAPDIVWDFRLPRVKSISASGHKFGLAPL--GCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQY 314 (452)
T ss_dssp HHHHCTTCCCSTTSTTEEEEEEETTTTTCCCS--SCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHH
T ss_pred HHhhCccchhhcCCCCCcEEEECcccccCCCC--CeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHH
Confidence 1 11 122 278999999999886554 478888754 333 333211111111 11 233445
Q ss_pred HHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Q 013019 398 LIIR--GMKTLHLRVQQQNSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 398 l~lr--gL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V 433 (451)
.+++ +.+.+..++++..++++.+.+.|+++++++.+
T Consensus 315 aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 352 (452)
T 2dgk_A 315 YEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFI 352 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Confidence 5544 34567777888999999999999999887554
No 157
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.82 E-value=2.5e-18 Score=176.33 Aligned_cols=211 Identities=13% Similarity=0.092 Sum_probs=143.7
Q ss_pred HHHHHHHHHhhhC--------CC--cEEEeCCHHHHHHHH--HHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEE
Q 013019 212 TVVVEEKMSALEG--------AE--STVIMASGMSASTVM--LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (451)
Q Consensus 212 ~~~Lee~LA~l~g--------ae--~~vv~sSG~aAi~~a--l~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~ 279 (451)
...|++.++++++ .+ +.+++++|++|+..+ +.+++++||+|++++|.|.+.... +...|.++..
T Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~----~~~~g~~~~~ 169 (420)
T 4f4e_A 94 IAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRAL----FDMAGFEVVA 169 (420)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHH----HHHTTCCEEE
T ss_pred cHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHH----HHHcCCeEEE
Confidence 4556666666542 23 445556666999988 557789999999999999886543 3456777666
Q ss_pred eCC----C---CHHHHHHhhcC--CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-----c
Q 013019 280 IDP----A---DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----K 342 (451)
Q Consensus 280 vd~----~---D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~-----~ 342 (451)
++. . |+++|++++++ .++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... .
T Consensus 170 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~ 249 (420)
T 4f4e_A 170 YPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAA 249 (420)
T ss_dssp EECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGH
T ss_pred eeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhH
Confidence 654 2 79999999972 24899999999999999965 678999999999999999998654321 1
Q ss_pred c-----ccCCCcEEEECCcccCCccccceeEEEEe---CHHHHHHHH----HHhHhhCCCccHHHHHHHHHhh-------
Q 013019 343 A-----LSLGADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIR----NLHHVLGGALNPNAAYLIIRGM------- 403 (451)
Q Consensus 343 p-----l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~---~~eli~~lr----~~~~~~G~~ls~~~a~l~lrgL------- 403 (451)
+ ...+.++++.|+||.++.+| .+.|+++. ++++++++. ..........+...++.+...+
T Consensus 250 ~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 328 (420)
T 4f4e_A 250 AVRLFAAANLNVFVSSSFSKSFSLYG-ERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRA 328 (420)
T ss_dssp HHHHHHHTTCCEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHhcCCCEEEEEeCCccCcCcC-CCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHH
Confidence 1 12356799999999998766 45677643 566665532 2222222223333333322211
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 404 ---KTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 404 ---~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+.+....++..++.+.+.+.|+++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~L~~~ 355 (420)
T 4f4e_A 329 SWVQELGEMRDRIRAMRNGLVERLKAA 355 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 234555667778888899999876
No 158
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.82 E-value=2.1e-18 Score=174.28 Aligned_cols=213 Identities=12% Similarity=0.060 Sum_probs=145.8
Q ss_pred hHHHHHHHHHhhhCC--------C--cEEEeCCHHHHHHHH--HHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEE
Q 013019 211 TTVVVEEKMSALEGA--------E--STVIMASGMSASTVM--LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (451)
Q Consensus 211 t~~~Lee~LA~l~ga--------e--~~vv~sSG~aAi~~a--l~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~ 278 (451)
....|++.++++++. + +.+++++|++|+..+ +.+++++||+|+++.|.|.+.... +...|.++.
T Consensus 71 g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~ 146 (397)
T 3fsl_A 71 GLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAI----FAGAGFEVS 146 (397)
T ss_dssp CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHH----HHHTTCCEE
T ss_pred chHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHH----HHHcCCceE
Confidence 345677777776532 3 445556666999888 456789999999999999886543 445677777
Q ss_pred EeCC----C---CHHHHHHhhcC--CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-----
Q 013019 279 VIDP----A---DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (451)
Q Consensus 279 ~vd~----~---D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----- 341 (451)
.++. . |+++|++++++ .++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 147 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~ 226 (397)
T 3fsl_A 147 TYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDA 226 (397)
T ss_dssp EECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGG
T ss_pred EEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCccccc
Confidence 7765 2 79999999973 24899999999999999965 568999999999999999998754321
Q ss_pred ccc-----cCCCcEEEECCcccCCccccceeEEEEe---CHHHHHHHHHH-hH---hhCCCccHHHHHHH---HHh----
Q 013019 342 KAL-----SLGADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNL-HH---VLGGALNPNAAYLI---IRG---- 402 (451)
Q Consensus 342 ~pl-----~~GaDiVv~S~SK~l~G~gdv~gG~Iv~---~~eli~~lr~~-~~---~~G~~ls~~~a~l~---lrg---- 402 (451)
.++ ..+.++++.|+||.++.+| .+.|++++ ++++++++... .. ......+...+..+ +..
T Consensus 227 ~~~~~~~~~~~~~i~~~S~SK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 305 (397)
T 3fsl_A 227 YAIRAIASAGLPALVSNSFSKIFSLYG-ERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALK 305 (397)
T ss_dssp HHHHHHHHTTCCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHH
T ss_pred HHHHHHHhcCCCEEEEecccccccCcC-CCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHH
Confidence 111 2345689999999998665 46787763 56666554322 11 11122233332222 211
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHcCC
Q 013019 403 ---MKTLHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 403 ---L~tl~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
.+.+..+.++..++.+.+.+.|++++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 334 (397)
T 3fsl_A 306 ASWLKEVEEMRTRILAMRQELVKVLSTEM 334 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 23355556777788888999998764
No 159
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.81 E-value=1.8e-18 Score=174.65 Aligned_cols=215 Identities=13% Similarity=0.076 Sum_probs=149.6
Q ss_pred chhHHHHHHHHHhhh---C-----CCcEEE--eCCHHHHHHHHHHHH--ccCCCeEEEcCCCCcchHHHHHHhhhcCCcE
Q 013019 209 NPTTVVVEEKMSALE---G-----AESTVI--MASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (451)
Q Consensus 209 npt~~~Lee~LA~l~---g-----ae~~vv--~sSG~aAi~~al~al--l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~ 276 (451)
.+....|+++|++++ + .++.++ +++|++|+..++..+ +.+||+|++++|.|.+.... +...|.+
T Consensus 68 ~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~ 143 (396)
T 2q7w_A 68 IDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSV----FNSAGLE 143 (396)
T ss_dssp TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHH----HHHTTCE
T ss_pred CCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHH----HHHcCCc
Confidence 344678888888887 2 345555 677779999988665 46999999999999986543 3456777
Q ss_pred EEEeCC---C----CHHHHHHhhcCC--CeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc---
Q 013019 277 ATVIDP---A----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (451)
Q Consensus 277 v~~vd~---~----D~d~Le~ai~~~--~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~--- 341 (451)
+..++. . |+++|++++++. +++++++++|+||||.+.+ +++|.++|+++|+++|+|++|......
T Consensus 144 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~ 223 (396)
T 2q7w_A 144 VREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEE 223 (396)
T ss_dssp EEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHH
T ss_pred eEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccc
Confidence 776654 2 799999999752 3788999999999999875 668999999999999999998764321
Q ss_pred c--ccc----C-CCcEEEECCcccCCccccceeEEEEe---CHH----HHHHHHHHhHhhCCCccHHHHHHHHHhhH---
Q 013019 342 K--ALS----L-GADLVLHSATKFIGGHNDVLAGSISG---SGK----LVTQIRNLHHVLGGALNPNAAYLIIRGMK--- 404 (451)
Q Consensus 342 ~--pl~----~-GaDiVv~S~SK~l~G~gdv~gG~Iv~---~~e----li~~lr~~~~~~G~~ls~~~a~l~lrgL~--- 404 (451)
. ++. . ..++++.|+||.++.+| .+.|++++ +++ +++.+...........++..++.+...|+
T Consensus 224 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 302 (396)
T 2q7w_A 224 DAEGLRAFAAMHKELIVASSYSXNFGLYN-ERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDA 302 (396)
T ss_dssp HTHHHHHHHHHCSCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHH
T ss_pred hhHHHHHHHhcCCcEEEEEeccccccccc-cccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChh
Confidence 1 111 1 24688999999998666 46788876 564 44444443322223345665555444443
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHcCC
Q 013019 405 -------TLHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 405 -------tl~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
.+....++..++.+.+.+.|++++
T Consensus 303 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 333 (396)
T 2q7w_A 303 LRAIWEQELTDMRQRIQRMRQLFVNTLQEKG 333 (396)
T ss_dssp HHHHHHHHHHHC-CHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 233334556677888888888764
No 160
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.81 E-value=1.3e-18 Score=177.26 Aligned_cols=214 Identities=11% Similarity=0.082 Sum_probs=148.3
Q ss_pred hhHHHHHHHHHhhh-C-------CCcEEE--eCCHHHHHHHH--HHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEE
Q 013019 210 PTTVVVEEKMSALE-G-------AESTVI--MASGMSASTVM--LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (451)
Q Consensus 210 pt~~~Lee~LA~l~-g-------ae~~vv--~sSG~aAi~~a--l~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v 277 (451)
+....|++.+++++ + .++.++ +++|++|+..+ +..++.+||+|++++|.|.+.... +...|.++
T Consensus 73 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~ 148 (412)
T 1yaa_A 73 TGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAI----FENQGLKT 148 (412)
T ss_dssp TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHH----HHTTTCCE
T ss_pred CCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHH----HHHcCceE
Confidence 34567888888877 3 356666 67777999887 345567999999999999986643 34557776
Q ss_pred EEeCC-------CCHHHHHHhhcCC--CeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----
Q 013019 278 TVIDP-------ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (451)
Q Consensus 278 ~~vd~-------~D~d~Le~ai~~~--~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~---- 341 (451)
..++. .|+++|++++++. ++.++++++|+||||.+.+ +++|.++|+++|+++|+|++|......
T Consensus 149 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~ 228 (412)
T 1yaa_A 149 ATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDK 228 (412)
T ss_dssp EEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHH
T ss_pred EEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccc
Confidence 66543 3789999988653 2456666999999999975 678899999999999999998653221
Q ss_pred c--cc----cCC----CcEEEECCcccCCccccceeEEEE--e-----CHH----HHHHHHHHhHhhCCCccHHHHHHHH
Q 013019 342 K--AL----SLG----ADLVLHSATKFIGGHNDVLAGSIS--G-----SGK----LVTQIRNLHHVLGGALNPNAAYLII 400 (451)
Q Consensus 342 ~--pl----~~G----aDiVv~S~SK~l~G~gdv~gG~Iv--~-----~~e----li~~lr~~~~~~G~~ls~~~a~l~l 400 (451)
. ++ ..+ .++++.|+||.++++| .+.|+++ + +++ ++++++..........+......+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-lriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~ 307 (412)
T 1yaa_A 229 DAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYG-ERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVA 307 (412)
T ss_dssp HTHHHHHHHHHTTTTCCEEEEEECTTTSCCGG-GCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHH
T ss_pred hhHHHHHHHhcCCCCcceEEEeccCCCCCCcC-CcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHH
Confidence 1 22 123 4688999999998766 5678887 6 566 6777766433333333555544444
Q ss_pred HhhH----------HHHHHHHHHHHHHHHHHHHHHcCC
Q 013019 401 RGMK----------TLHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 401 rgL~----------tl~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
..|+ .+....++..++.+.+.+.|++++
T Consensus 308 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1yaa_A 308 KLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLG 345 (412)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3332 344445666677888888888764
No 161
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.81 E-value=5.1e-19 Score=179.05 Aligned_cols=216 Identities=19% Similarity=0.155 Sum_probs=154.3
Q ss_pred CchhHHHHH----HHHHhhhCCCcE-EEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc--EEEEe
Q 013019 208 GNPTTVVVE----EKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVI 280 (451)
Q Consensus 208 ~npt~~~Le----e~LA~l~gae~~-vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi--~v~~v 280 (451)
+++....++ +++++++|.+.. +++++|++|+..++.+++++||+|+++++.|+++.... ..+...|. ....+
T Consensus 63 g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 141 (407)
T 2dkj_A 63 GCEVIDRVESLAIERAKALFGAAWANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHG-SRVNFSGKLYKVVSY 141 (407)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGT-CTTSHHHHHSEEEEE
T ss_pred CchHHHHHHHHHHHHHHHHhCCCcceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchH-HHHHhcCceEEEEec
Confidence 566555555 489999998665 66799999999999999999999999999998763100 11122222 33333
Q ss_pred --C----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-----ccccccCCCc
Q 013019 281 --D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQKALSLGAD 349 (451)
Q Consensus 281 --d----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-----~~~pl~~GaD 349 (451)
+ ..|+++|++++++.++++|++++|+|| .+.|+++|.++|+++|+++|+|++|+.+. ...++. ..|
T Consensus 142 ~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~d 218 (407)
T 2dkj_A 142 GVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAH 218 (407)
T ss_dssp CCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCS
T ss_pred CCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc-ccc
Confidence 2 247999999997424899999999997 67799999999999999999999986521 111222 379
Q ss_pred EEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhC-CCccHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHH
Q 013019 350 LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-GALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAE 422 (451)
Q Consensus 350 iVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G-~~ls~~~a~l~lrgL-----~tl~~Rl~~~~~nA~~Lae 422 (451)
+++.|++|+++|+. +|+++++ ++++++++.....+. ...++.....+...+ +.+....++..++++.+.+
T Consensus 219 i~~~s~sK~l~g~~---~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 295 (407)
T 2dkj_A 219 VVTSTTHKTLRGPR---GGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAE 295 (407)
T ss_dssp EEEEESSGGGCCCS---CEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccCCCCC---ceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 99999999998764 7999999 799888877654332 233342222222222 3445667778888999999
Q ss_pred HHHcCCCeE
Q 013019 423 ILEAHPKVL 431 (451)
Q Consensus 423 ~L~~~p~V~ 431 (451)
.|+++ ++.
T Consensus 296 ~L~~~-g~~ 303 (407)
T 2dkj_A 296 ELARR-GYR 303 (407)
T ss_dssp HHHHT-TCE
T ss_pred HHHhC-Cce
Confidence 99887 553
No 162
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.81 E-value=6e-19 Score=183.45 Aligned_cols=216 Identities=10% Similarity=0.093 Sum_probs=155.1
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHccCCCe---EEEcCCCCcchHHHHHHhhhcCCcEE-----EE
Q 013019 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGH---IVTTTDCYRKTRIFIETVLPKMGITA-----TV 279 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all~~GD~---VIv~~~~Y~~t~~~l~~~l~~~Gi~v-----~~ 279 (451)
+..+.+++++++++|++ +.++++++++++..++.+++++||. |+++.+.|.+....+...++..|+++ .+
T Consensus 111 ~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~ 190 (465)
T 3e9k_A 111 TGDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMI 190 (465)
T ss_dssp GTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEE
T ss_pred HhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEE
Confidence 44577999999999973 5666677779999999999877665 99999999987665655566667653 33
Q ss_pred eCC-----CCHHHHHHhhcC--CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc-ccccCCCcEE
Q 013019 280 IDP-----ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLV 351 (451)
Q Consensus 280 vd~-----~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-~pl~~GaDiV 351 (451)
.+. .|+++|+++|++ .++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+... ...++++|++
T Consensus 191 ~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~ 270 (465)
T 3e9k_A 191 KPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFA 270 (465)
T ss_dssp CCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEE
T ss_pred ecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEE
Confidence 321 379999999962 24999999999999999999999999999999999999998876432 2234689999
Q ss_pred EECCcccCC-ccccceeEEEEeCHHHHHHHHHHhH-------------------------hhCCCccHHHHHHHHHhhHH
Q 013019 352 LHSATKFIG-GHNDVLAGSISGSGKLVTQIRNLHH-------------------------VLGGALNPNAAYLIIRGMKT 405 (451)
Q Consensus 352 v~S~SK~l~-G~gdv~gG~Iv~~~eli~~lr~~~~-------------------------~~G~~ls~~~a~l~lrgL~t 405 (451)
+.|++|+++ |++ ..|+++.++++++++..... ...++.+......+..+++.
T Consensus 271 ~~s~~K~l~~gp~--~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~ 348 (465)
T 3e9k_A 271 CWCSYKYLNAGAG--GIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEI 348 (465)
T ss_dssp EECSSSTTCCCTT--CCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHH
T ss_pred EECcccccccCCC--ceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHH
Confidence 999999995 554 34777888877654431100 00113344444433334433
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHcC
Q 013019 406 -----LHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 406 -----l~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+....++..+++..+.+.|+++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 3e9k_A 349 FKQATMKALRKKSVLLTGYLEYLIKHN 375 (465)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 3334455666777788888774
No 163
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.81 E-value=3e-19 Score=188.87 Aligned_cols=217 Identities=16% Similarity=0.124 Sum_probs=139.5
Q ss_pred CchhHHHHH----HHHHhhhCCCc----EEE-eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHH--HH-H-HhhhcCC
Q 013019 208 GNPTTVVVE----EKMSALEGAES----TVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRI--FI-E-TVLPKMG 274 (451)
Q Consensus 208 ~npt~~~Le----e~LA~l~gae~----~vv-~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~--~l-~-~~l~~~G 274 (451)
|+++.++|| +++++++|.+. +.+ ++||++|+..++.+++++||+|++.++.|++... .+ . ..+...|
T Consensus 94 G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g 173 (490)
T 2a7v_A 94 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATS 173 (490)
T ss_dssp ----CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC------------------------
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcC
Confidence 566667777 89999999875 444 4699999999999999999999999999976431 10 0 0111223
Q ss_pred c--EEEEe--C----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCC-----CCcc
Q 013019 275 I--TATVI--D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-----PLNQ 341 (451)
Q Consensus 275 i--~v~~v--d----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~-----~~~~ 341 (451)
. .+..+ + ..|+++|++++++.++++|+++.++|| ...|+++|.++|+++|++|++|+++.. +...
T Consensus 174 ~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~ 251 (490)
T 2a7v_A 174 IFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIP 251 (490)
T ss_dssp -------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSC
T ss_pred CeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCCCCC--CcccHHHHHHHHHHcCCEEEEccccccccccCCcCC
Confidence 2 22222 2 348999999986434899999888876 467999999999999999999999642 2334
Q ss_pred ccccCCCcEEEECCcccCCccccceeEEEEeCHH---------------HHHHHHHHhHhh--CCCccH-HHHHH-H-HH
Q 013019 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------LVTQIRNLHHVL--GGALNP-NAAYL-I-IR 401 (451)
Q Consensus 342 ~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~e---------------li~~lr~~~~~~--G~~ls~-~~a~l-~-lr 401 (451)
.++. ++|+++.|+||+++|+. ||+++++++ +.++++...... |+.... ..+.. + ..
T Consensus 252 ~~~~-~aDiv~~S~hK~l~Gp~---GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~ 327 (490)
T 2a7v_A 252 SPFK-HADIVTTTTHKTLRGAR---SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQ 327 (490)
T ss_dssp CGGG-TCSEEEEESSGGGCSCS---CEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHH
T ss_pred CCCC-CCCEEEECCcccCcccc---chheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHH
Confidence 4554 69999999999998874 899988764 456666543211 221111 22211 1 12
Q ss_pred hh-HHHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 013019 402 GM-KTLHLRVQQQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 402 gL-~tl~~Rl~~~~~nA~~Lae~L~~~p~V~ 431 (451)
.+ +.+..+.++..+|++.|++.|.+. ++.
T Consensus 328 ~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~ 357 (490)
T 2a7v_A 328 ACTPMFREYSLQVLKNARAMADALLER-GYS 357 (490)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHc-CcE
Confidence 22 345667888899999999999986 443
No 164
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.81 E-value=4.4e-19 Score=181.08 Aligned_cols=206 Identities=13% Similarity=0.124 Sum_probs=144.0
Q ss_pred HHHHHHHHhhhC-------CCcEEEeCCHH-HHHHHHHHHHccCCC----eEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 213 VVVEEKMSALEG-------AESTVIMASGM-SASTVMLLALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 213 ~~Lee~LA~l~g-------ae~~vv~sSG~-aAi~~al~all~~GD----~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
..|++.|+++++ .++.+++++|. +++..++.+++++|| +|++++|.|......+ +..|.++..+
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~----~~~g~~~~~~ 146 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEET----TYVRSGMYKW 146 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHH----HTTCBTTEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHH----HHcCCeEEEe
Confidence 789999999886 33456666665 899999999999999 9999999999866444 3445554443
Q ss_pred CCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccc--cCCCcEEEECCccc
Q 013019 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKAL--SLGADLVLHSATKF 358 (451)
Q Consensus 281 d~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl--~~GaDiVv~S~SK~ 358 (451)
+. |.+.++ .+ ++++|++++|+||||.+.+ +|++.++.+++++|+|++|..+. ..++ ..+.++++.|+||.
T Consensus 147 ~~-d~~~l~---~~-~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~-~~~l~~~~~~~i~~~S~SK~ 218 (391)
T 3bwn_A 147 EG-DAWGFD---KK-GPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPH-YTPITRRQDHDIMLFTFSKI 218 (391)
T ss_dssp EE-ESTTCC---CC-SCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTT-TSCCCCCBCCSEEEEEHHHH
T ss_pred cC-CHHHcC---CC-CCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCC-CCccccCCCCeEEEEechhh
Confidence 32 222222 23 5899999999999999986 45442233349999999987421 1122 24678999999999
Q ss_pred CCccccceeEEEEe-CHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH--------------HHHHHHHHHHHHHHHHHH
Q 013019 359 IGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT--------------LHLRVQQQNSTALRMAEI 423 (451)
Q Consensus 359 l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t--------------l~~Rl~~~~~nA~~Lae~ 423 (451)
++.+| ++.|++++ +++++++++..+.....+.+...+..+...|+. +....+...++.+.+.+.
T Consensus 219 ~g~~G-lRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 297 (391)
T 3bwn_A 219 TGHAG-SRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREV 297 (391)
T ss_dssp HSCGG-GCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCc-cceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 98776 56788886 889999988877654445566655544444432 334455666788889999
Q ss_pred HHcCCCeE
Q 013019 424 LEAHPKVL 431 (451)
Q Consensus 424 L~~~p~V~ 431 (451)
|+++|++.
T Consensus 298 L~~~~~~~ 305 (391)
T 3bwn_A 298 VKESDAFT 305 (391)
T ss_dssp HHTCSSEE
T ss_pred HHhCCCcc
Confidence 99987653
No 165
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.81 E-value=2.2e-19 Score=182.18 Aligned_cols=210 Identities=14% Similarity=0.130 Sum_probs=152.4
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc------C-CCeEEEcCCCCcchHH-HHHHhhhcCCcE--
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP------A-GGHIVTTTDCYRKTRI-FIETVLPKMGIT-- 276 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~------~-GD~VIv~~~~Y~~t~~-~l~~~l~~~Gi~-- 276 (451)
|.++...+|+++|++++|.++++++++|++|+..++.++.. + +|+|++.++.|.+... .+.. .|.+
T Consensus 79 ~~~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~----~g~~~~ 154 (397)
T 2ord_A 79 FWNRPQMELAELLSKNTFGGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTA----TGQPKY 154 (397)
T ss_dssp SEEHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHH----SBCHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhc----cCChhh
Confidence 46788999999999999988888999999999999988764 5 4789999999866433 3321 2222
Q ss_pred ----------EEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc-c---ccHHHHHHHHHhcCCEEEEecCCCCCC-cc
Q 013019 277 ----------ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR-C---VDVKLVSDLCHKKGAIVCIDGTFATPL-NQ 341 (451)
Q Consensus 277 ----------v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~-v---~DL~~IaelA~~~g~~lVVD~tfa~~~-~~ 341 (451)
+..++..|+++|++++++ ++++|++++|+||||. + .++++|.++|+++|++||+|+++.... ..
T Consensus 155 ~~~~~p~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g 233 (397)
T 2ord_A 155 QKPFEPLVPGFEYFEFNNVEDLRRKMSE-DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTG 233 (397)
T ss_dssp HGGGCSCCTTEEEECTTCHHHHHHHCCT-TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred ccccCCCCCCeeEecCCCHHHHHHHhhc-CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCc
Confidence 666777799999999986 4999999999999998 3 478999999999999999999986321 11
Q ss_pred cc-----ccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHH--HHHHHHH
Q 013019 342 KA-----LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQN 414 (451)
Q Consensus 342 ~p-----l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~--~Rl~~~~ 414 (451)
.+ +....|++ |++|++++ | .+.|+++++++++ .++..........++..++.+...|+.+. ...++..
T Consensus 234 ~~~~~~~~~~~~d~~--s~sK~~~~-G-~r~G~~~~~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 308 (397)
T 2ord_A 234 KLFAYQKYGVVPDVL--TTAKGLGG-G-VPIGAVIVNERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVE 308 (397)
T ss_dssp SSSHHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHH
T ss_pred cchhhhhhCCCCCee--eeccccCC-C-cCeEEEEEchHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 11 12236866 67899984 3 4678888887765 54322222223456777766666666543 2455666
Q ss_pred HHHHHHHHHHHc
Q 013019 415 STALRMAEILEA 426 (451)
Q Consensus 415 ~nA~~Lae~L~~ 426 (451)
++++.+.+.|++
T Consensus 309 ~~~~~l~~~L~~ 320 (397)
T 2ord_A 309 EKGNYLMKKLQE 320 (397)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777777765
No 166
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.81 E-value=6.9e-19 Score=183.52 Aligned_cols=210 Identities=14% Similarity=0.149 Sum_probs=152.8
Q ss_pred hHHHHHHHHHhhhCCCc-EEEeCCHH-HHHHHHHHHHcc--CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 211 TTVVVEEKMSALEGAES-TVIMASGM-SASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 211 t~~~Lee~LA~l~gae~-~vv~sSG~-aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
..+++++++++++|.+. ++++++|+ .++..++.++.. +|++||++++.|.+... .++..|+++..++.
T Consensus 134 ~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~----~~~~~G~~~~~v~~~~~~ 209 (456)
T 2z67_A 134 LTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIK----AVSFVGMNMRLVETVLDG 209 (456)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH----HHHHTTCEEEEECCEEET
T ss_pred HHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHH----HHHHcCCCceEEEEeccC
Confidence 34568999999999854 56666777 566656666544 67889999999987553 34457888877653
Q ss_pred ----CCHHHHHHhh-cC---CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccc---cC--CC
Q 013019 283 ----ADMEGLEAAL-NN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKAL---SL--GA 348 (451)
Q Consensus 283 ----~D~d~Le~ai-~~---~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl---~~--Ga 348 (451)
.|+++|+++| ++ .++.+|++++|+||+|.+.|+++|.++|+++|+++++|++|+.... ..+. .+ ++
T Consensus 210 ~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~ 289 (456)
T 2z67_A 210 DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRV 289 (456)
T ss_dssp TEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCC
T ss_pred CCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCC
Confidence 4799999999 52 3588899999999999999999999999999999999999875432 1111 12 79
Q ss_pred cEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCC--ccHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHH
Q 013019 349 DLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA--LNPNAAYLIIRG--MKTLHLRVQQQNSTALRMAEI 423 (451)
Q Consensus 349 DiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~--ls~~~a~l~lrg--L~tl~~Rl~~~~~nA~~Lae~ 423 (451)
|+++.|++|+++++. .+|+++. ++++++++... ..|.. ......|..+.. .+.+..+.++..++++.+.+.
T Consensus 290 D~~~~s~hK~~~~p~--g~G~l~~~~~~~~~~l~~~--~~g~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~ 365 (456)
T 2z67_A 290 DAVVSSSDKNLLTPI--GGGLVYSTDAEFIKEISLS--YPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDEL 365 (456)
T ss_dssp SEEEEEHHHHHCCCS--SCEEEEESCHHHHHHHHTT--SCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCCCcCCCC--CeEEEEEcCHHHHhhcCcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999876653 4788888 57787776432 23322 123334444333 345666778888899999999
Q ss_pred HHcCC
Q 013019 424 LEAHP 428 (451)
Q Consensus 424 L~~~p 428 (451)
|++.|
T Consensus 366 L~~~~ 370 (456)
T 2z67_A 366 LNDLS 370 (456)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 98874
No 167
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.80 E-value=2.6e-18 Score=174.17 Aligned_cols=213 Identities=15% Similarity=0.191 Sum_probs=153.5
Q ss_pred hhHHHHHHHHHhhhCCCcEEEe-CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCC--cEEEEeC-----
Q 013019 210 PTTVVVEEKMSALEGAESTVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVID----- 281 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae~~vv~-sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~G--i~v~~vd----- 281 (451)
...+++++++++++|.++.+++ +||++|+.+++. ++.+||+||+.++.|.+.. +...+...| .++.+++
T Consensus 35 ~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~g 111 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFSYR--WTQILEKGKFAKSSTVLTAERTE 111 (379)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHHHH--HHHHHHHHCCSSEEEEEECEESS
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchhHH--HHHHHHHhCCCCceEEEeccccc
Confidence 4567789999999998766665 588899998875 4579999999998887642 223334444 3555443
Q ss_pred ---------CCCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCccccccCCCc
Q 013019 282 ---------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGAD 349 (451)
Q Consensus 282 ---------~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaD 349 (451)
..|+++|++++++.++++|++..++|++|.+.| +++|.++|+++|+++|+|++++.........+|+|
T Consensus 112 ~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~g~~~~~~~~~~~d 191 (379)
T 3ke3_A 112 DTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIASGCVWLDMKELGID 191 (379)
T ss_dssp CCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTCTTCCCCHHHHTCS
T ss_pred cccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEecccCCccccccccCCC
Confidence 368999999995424899999999999999999 99999999999999999999872222333346899
Q ss_pred EEEECCcccCCccccceeEEEEeCHHHHHHHHHHh----------------H-hhC-----CCccHHHHHHHHHhhHH--
Q 013019 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----------------H-VLG-----GALNPNAAYLIIRGMKT-- 405 (451)
Q Consensus 350 iVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~----------------~-~~G-----~~ls~~~a~l~lrgL~t-- 405 (451)
+++.|++|+++|+. .+|+++.+++++++++... . ..| .+.+....+.+..+++.
T Consensus 192 ~~~~s~~K~l~~~~--g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~ 269 (379)
T 3ke3_A 192 VLISAPQKGWSSTP--CAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAK 269 (379)
T ss_dssp EEEECTTTTTCSCC--CEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHH
T ss_pred EEEecchhhcCCCC--ceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999998774 3789999999888775311 0 011 14444444433334433
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHcC
Q 013019 406 ---LHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 406 ---l~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+..+.++..++++.+.+.|++.
T Consensus 270 ~~g~~~~~~~~~~l~~~l~~~l~~~ 294 (379)
T 3ke3_A 270 EIGFDILRDAQWELGNRVRKVLTDK 294 (379)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHc
Confidence 2445566677788888888876
No 168
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.80 E-value=1.9e-18 Score=183.20 Aligned_cols=221 Identities=14% Similarity=0.158 Sum_probs=160.4
Q ss_pred CchhHHHHHH----HHHhhhCCC----cEEEeCCHHHHHHHHHHHHcc--------------CCCeEEEcCCCCcchHHH
Q 013019 208 GNPTTVVVEE----KMSALEGAE----STVIMASGMSASTVMLLALVP--------------AGGHIVTTTDCYRKTRIF 265 (451)
Q Consensus 208 ~npt~~~Lee----~LA~l~gae----~~vv~sSG~aAi~~al~all~--------------~GD~VIv~~~~Y~~t~~~ 265 (451)
..|....+|+ ++++++|.+ ..+++++|++|+..++.++.. +++.|++++..|.+....
T Consensus 129 ~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~ 208 (511)
T 3vp6_A 129 IAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKA 208 (511)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHH
Confidence 5677666665 556677764 567788889999888877654 467899999999886644
Q ss_pred HHHhhhcCCc---EEEEeCCC-----CHHHHHHhhcCC-----CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEe
Q 013019 266 IETVLPKMGI---TATVIDPA-----DMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 266 l~~~l~~~Gi---~v~~vd~~-----D~d~Le~ai~~~-----~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD 332 (451)
+ ...|+ ++..++.+ |+++|+++|+++ .+++|++++|+|++|.+.|+++|+++|++||+++++|
T Consensus 209 ~----~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD 284 (511)
T 3vp6_A 209 G----AALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVD 284 (511)
T ss_dssp H----HHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEE
T ss_pred H----HHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEE
Confidence 3 34455 67776643 899999999753 1789999999999999999999999999999999999
Q ss_pred cCCCCCCcccc-----c--cCCCcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHh-Hhh----------------
Q 013019 333 GTFATPLNQKA-----L--SLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLH-HVL---------------- 387 (451)
Q Consensus 333 ~tfa~~~~~~p-----l--~~GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~-~~~---------------- 387 (451)
++|+.+....+ + ..++|+++.+++|+++++. .+|+++. +++++++..... .++
T Consensus 285 ~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~--g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 362 (511)
T 3vp6_A 285 AAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLL--QCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDK 362 (511)
T ss_dssp ETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCS--CCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGG
T ss_pred ccchhhHhhChhhhhhccCCccCCEEEECcccccCCCc--CeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCC
Confidence 99876543211 1 1257999999999998774 2455554 555555432110 000
Q ss_pred ----CCCccHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe
Q 013019 388 ----GGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAEILEAHPKVLLLF 434 (451)
Q Consensus 388 ----G~~ls~~~a~l~lr--gL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V~ 434 (451)
+.....+..|.+++ +.+.+..+++++.++++.+.+.|+++|+++.+.
T Consensus 363 ~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~ 415 (511)
T 3vp6_A 363 AIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVF 415 (511)
T ss_dssp SSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESS
T ss_pred CCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 11123455555554 567788899999999999999999999886643
No 169
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.80 E-value=9.5e-19 Score=181.71 Aligned_cols=214 Identities=21% Similarity=0.204 Sum_probs=153.5
Q ss_pred CchhHHHHH----HHHHhhhCCCcEEE-eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHH-hhhcCCcEEEEeC
Q 013019 208 GNPTTVVVE----EKMSALEGAESTVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVID 281 (451)
Q Consensus 208 ~npt~~~Le----e~LA~l~gae~~vv-~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~-~l~~~Gi~v~~vd 281 (451)
+++..+.++ +++++++|.+...+ ++||++|+..++.+++++||+|++.++.|++.+..... .+...+..+..++
T Consensus 85 g~~~~~~~e~~a~~~la~~~g~~~~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 164 (447)
T 3h7f_A 85 GCEHVDVVENLARDRAKALFGAEFANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYG 164 (447)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEEC
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcC
Confidence 445544444 89999999987777 89999999999999999999999999998773211000 0111123333333
Q ss_pred ------CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC-----CccccccCCCcE
Q 013019 282 ------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-----LNQKALSLGADL 350 (451)
Q Consensus 282 ------~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~-----~~~~pl~~GaDi 350 (451)
..|+++|++++++.++++|++++|+||++. ++++|.++|+++|++||+|+++..+ ....++. ++|+
T Consensus 165 ~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~-~~di 241 (447)
T 3h7f_A 165 VDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVP-HADV 241 (447)
T ss_dssp CCTTTCSCCHHHHHHHHHHHCCSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT-TCSE
T ss_pred cCcccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCC-CCcE
Confidence 258999999986434889999999998876 9999999999999999999996432 2223332 5899
Q ss_pred EEECCcccCCccccceeEEEEeCHHHHHHHHHHhHh--hCCCccHHHH--HHHHH-hh-HHHHHHHHHHHHHHHHHHHHH
Q 013019 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAA--YLIIR-GM-KTLHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 351 Vv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--~G~~ls~~~a--~l~lr-gL-~tl~~Rl~~~~~nA~~Lae~L 424 (451)
++.|++|+++|+ ++|+++++++++++++..... .|....+..+ ..++. .+ +.+..+.++..++++.+.+.|
T Consensus 242 ~~~s~sK~l~G~---~gG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L 318 (447)
T 3h7f_A 242 VSTTVHKTLGGG---RSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRL 318 (447)
T ss_dssp EEEESSGGGCCC---SCEEEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCcCCCCC---CeEEEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999876 489999999888888765432 2222222121 11222 22 256677888899999999999
Q ss_pred HcC
Q 013019 425 EAH 427 (451)
Q Consensus 425 ~~~ 427 (451)
+++
T Consensus 319 ~~~ 321 (447)
T 3h7f_A 319 MAP 321 (447)
T ss_dssp TSH
T ss_pred Hhc
Confidence 876
No 170
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.80 E-value=1.8e-18 Score=178.02 Aligned_cols=217 Identities=14% Similarity=0.142 Sum_probs=154.3
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc-------CC-CeEEEcCCCCcchHH-HHHHh-hh----
Q 013019 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRI-FIETV-LP---- 271 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~-------~G-D~VIv~~~~Y~~t~~-~l~~~-l~---- 271 (451)
.+.++...+|+++|+++.|.+++++++||++|+..++.++.. +| ++||+.++.|.+... .+... ..
T Consensus 95 ~~~~~~~~~l~~~la~~~g~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~ 174 (420)
T 2pb2_A 95 VFTNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSD 174 (420)
T ss_dssp TSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHT
T ss_pred ccCCHHHHHHHHHHHhhCCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccc
Confidence 356788999999999999988889999999999999998775 67 489999999976432 22111 00
Q ss_pred ---cCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccc----cccHHHHHHHHHhcCCEEEEecCCCCC-Cc---
Q 013019 272 ---KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR----CVDVKLVSDLCHKKGAIVCIDGTFATP-LN--- 340 (451)
Q Consensus 272 ---~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~----v~DL~~IaelA~~~g~~lVVD~tfa~~-~~--- 340 (451)
.....+..++..|+++|++++++ ++++|++|.++|++|. ..++++|.++|+++|++||+|+++... ..
T Consensus 175 ~~~p~~~~~~~~~~~d~~~le~~i~~-~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~ 253 (420)
T 2pb2_A 175 GFGPKPADIIHVPFNDLHAVKAVMDD-HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDL 253 (420)
T ss_dssp TSSSCCSCEEEECTTCHHHHHHHCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred cCCCCCCCeEEecCCCHHHHHHHhcc-CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcH
Confidence 11123566677799999999987 4999999999888775 246899999999999999999998532 11
Q ss_pred --cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHH--HHHHHHHHH
Q 013019 341 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST 416 (451)
Q Consensus 341 --~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~--~Rl~~~~~n 416 (451)
........|++ |++|.+++ | .+.|++++++++++.++..........++..+..++..|+.+. ...++..++
T Consensus 254 ~~~~~~~~~~dii--t~sK~l~~-G-~~iG~~~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~ 329 (420)
T 2pb2_A 254 FAYMHYGVTPDIL--TSAKALGG-G-FPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTK 329 (420)
T ss_dssp SHHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHH
T ss_pred HHHHhcCCCCCeE--EecccccC-C-CceEEEEEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 11223456877 67899984 4 4678888898877766542222222456777766666666542 345666677
Q ss_pred HHHHHHHHHcC
Q 013019 417 ALRMAEILEAH 427 (451)
Q Consensus 417 A~~Lae~L~~~ 427 (451)
.+.+.+.|++.
T Consensus 330 ~~~l~~~L~~~ 340 (420)
T 2pb2_A 330 RQQFVQHLQAI 340 (420)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777777653
No 171
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.80 E-value=9e-19 Score=177.75 Aligned_cols=213 Identities=17% Similarity=0.183 Sum_probs=143.7
Q ss_pred HHHHHHHHHhhhCCCcE-EEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHH-hhhcCCcEEEEe--C---CCC
Q 013019 212 TVVVEEKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVI--D---PAD 284 (451)
Q Consensus 212 ~~~Lee~LA~l~gae~~-vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~-~l~~~Gi~v~~v--d---~~D 284 (451)
.+.+++++++++|.+.. +++++|++|+..++.+++++||+|+++.+.|+++...... .+...++....+ + ..|
T Consensus 78 ~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 157 (420)
T 3gbx_A 78 EQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKID 157 (420)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCC
T ss_pred HHHHHHHHHHHhCCCCceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcC
Confidence 34456889999998655 5589999999999999999999999999999874311111 111112222222 2 258
Q ss_pred HHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-----cccccCCCcEEEECCcccC
Q 013019 285 MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSATKFI 359 (451)
Q Consensus 285 ~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-----~~pl~~GaDiVv~S~SK~l 359 (451)
+++|+++++++++++|++++|+|| ...|+++|.++|++||+++|+|+++..+.. ...+. .+|+++.|+||++
T Consensus 158 ~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~ 234 (420)
T 3gbx_A 158 YDEMAKLAKEHKPKMIIGGFSAYS--GVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-HAHVVTTTTHKTL 234 (420)
T ss_dssp HHHHHHHHHHHCCSEEEECCTTCC--SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-TSSEEEEESSGGG
T ss_pred HHHHHHHHHhcCCeEEEEecCccC--CccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccc-cCCEEEeecccCC
Confidence 999999997644899999999986 478999999999999999999999754321 22222 3799999999999
Q ss_pred CccccceeEEEEeCH---HHHHHHHHHhHh--hCCCccHHHH--HHHH-Hhh-HHHHHHHHHHHHHHHHHHHHHHcCCCe
Q 013019 360 GGHNDVLAGSISGSG---KLVTQIRNLHHV--LGGALNPNAA--YLII-RGM-KTLHLRVQQQNSTALRMAEILEAHPKV 430 (451)
Q Consensus 360 ~G~gdv~gG~Iv~~~---eli~~lr~~~~~--~G~~ls~~~a--~l~l-rgL-~tl~~Rl~~~~~nA~~Lae~L~~~p~V 430 (451)
+|+. ||++++++ ++.+.++..... .+....+..+ ...+ ..+ +.+..+.++..++++.+.+.|++. ++
T Consensus 235 ~g~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 310 (420)
T 3gbx_A 235 AGPR---GGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GY 310 (420)
T ss_dssp CSCS---CEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred CCCC---ceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 8764 79999987 777777654332 2222222211 1122 222 455666788888899999999873 44
Q ss_pred E
Q 013019 431 L 431 (451)
Q Consensus 431 ~ 431 (451)
.
T Consensus 311 ~ 311 (420)
T 3gbx_A 311 K 311 (420)
T ss_dssp E
T ss_pred e
Confidence 3
No 172
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.80 E-value=2.3e-18 Score=181.21 Aligned_cols=217 Identities=16% Similarity=0.104 Sum_probs=150.9
Q ss_pred chhHHHHH----HHHHhhhCCC-----cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHH----hhhcCC-
Q 013019 209 NPTTVVVE----EKMSALEGAE-----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET----VLPKMG- 274 (451)
Q Consensus 209 npt~~~Le----e~LA~l~gae-----~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~----~l~~~G- 274 (451)
++..+.++ +++++++|.+ ..++++||++|+.+++.+++++||+|+++++.|+++...... .....|
T Consensus 85 ~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~ 164 (483)
T 1rv3_A 85 TEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSI 164 (483)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHH
T ss_pred chhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccc
Confidence 44455555 8899999975 348899999999998999999999999999999886421100 011112
Q ss_pred -cEEEEe--C----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC-----Cccc
Q 013019 275 -ITATVI--D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-----LNQK 342 (451)
Q Consensus 275 -i~v~~v--d----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~-----~~~~ 342 (451)
+....+ + ..|+++|++++++.++++|++ +++|++ .+.|+++|.++|+++|++|++|+++..+ ....
T Consensus 165 ~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~ 242 (483)
T 1rv3_A 165 FFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPS 242 (483)
T ss_dssp HSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCC
T ss_pred eEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCC
Confidence 333333 3 248999999998335899999 899998 8999999999999999999999997532 2223
Q ss_pred cccCCCcEEEECCcccCCccccceeEEEEeCHH---------------HHHHHHHHhH-h-hCCCccH-HHHH-HHHHhh
Q 013019 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------LVTQIRNLHH-V-LGGALNP-NAAY-LIIRGM 403 (451)
Q Consensus 343 pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~e---------------li~~lr~~~~-~-~G~~ls~-~~a~-l~lrgL 403 (451)
++. ++|+++.|+||+|+|+. +|+++++++ +.+++..... . .|..... ..+. .+++.+
T Consensus 243 p~~-~~div~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~ 318 (483)
T 1rv3_A 243 PFE-HCHVVTTTTHKTLRGCR---AGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQA 318 (483)
T ss_dssp GGG-TCSEEEEESSGGGCCCS---CEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHH
T ss_pred CCC-CCcEEEecCcccCCCCC---ceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHH
Confidence 333 68999999999998875 799988764 3344433211 1 1222111 1111 122222
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 013019 404 --KTLHLRVQQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 404 --~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
..+..+.++..++++.+++.|+++ +++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 348 (483)
T 1rv3_A 319 MTPEFKEYQRQVVANCRALSAALVEL-GYKI 348 (483)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred hChhHHHHHHHHHHHHHHHHHHHHhc-CCEe
Confidence 345667788889999999999987 6643
No 173
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.80 E-value=1.3e-18 Score=185.40 Aligned_cols=157 Identities=14% Similarity=0.164 Sum_probs=117.4
Q ss_pred HHHHHHHHhhh----CC-------CcEEEeCCHHHHHHHHHHH-----HccCCCeEEEcCCCCcchHHHHHHhhhcCCcE
Q 013019 213 VVVEEKMSALE----GA-------ESTVIMASGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (451)
Q Consensus 213 ~~Lee~LA~l~----ga-------e~~vv~sSG~aAi~~al~a-----ll~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~ 276 (451)
..|++.+++++ +. ++.+++++|++|+..++.+ ++++||+|++++|.|.+.. ..+...|.+
T Consensus 141 ~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~----~~~~~~g~~ 216 (533)
T 3f6t_A 141 VNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYL----RIPELKDYE 216 (533)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHH----TSGGGGGSE
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHH----HHHHHcCCe
Confidence 45555555554 32 3455555666999999988 7899999999999998755 344455777
Q ss_pred EEEeCCC---------CHHHHHHhhcCCCeEEEEEeCCCCCccccccHH---HHHHHHH-hcCCEEEEecCCCCCCcc-c
Q 013019 277 ATVIDPA---------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVK---LVSDLCH-KKGAIVCIDGTFATPLNQ-K 342 (451)
Q Consensus 277 v~~vd~~---------D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~---~IaelA~-~~g~~lVVD~tfa~~~~~-~ 342 (451)
+..++.. |+++|++++++ ++++|++++|+||||.+.+++ +|+++|+ ++|+++|+|++|+..... .
T Consensus 217 ~~~v~~~~~~~~~~~~d~~~l~~~l~~-~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~ 295 (533)
T 3f6t_A 217 LVEVDLHSYEKNDWEIEPNEIEKLKDP-SIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFK 295 (533)
T ss_dssp EEEECCCEETTTTSEECHHHHHHHSCT-TEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCC
T ss_pred EEEEEecCCcccCCCCCHHHHHHHhCC-CCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCcc
Confidence 7666532 79999999987 499999999999999998765 7888888 689999999998753221 1
Q ss_pred c---ccCCCcEEEECCcccCCccccceeEEEEeCHH
Q 013019 343 A---LSLGADLVLHSATKFIGGHNDVLAGSISGSGK 375 (451)
Q Consensus 343 p---l~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~e 375 (451)
+ ...+.++++.|+||.++.+| .+.|+++++++
T Consensus 296 ~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~l~~~~~ 330 (533)
T 3f6t_A 296 SIYSVVPYNTMLVYSYSKLFGCTG-WRLGVIALNEK 330 (533)
T ss_dssp CHHHHSGGGEEEEEESHHHHTCGG-GCEEEEEEESS
T ss_pred CHhhcCCCCEEEEecCcccCCCcc-cceEEEEECcH
Confidence 1 11235699999999998776 46788887654
No 174
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.80 E-value=7.7e-18 Score=174.76 Aligned_cols=217 Identities=17% Similarity=0.124 Sum_probs=156.0
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc---------cCC-CeEEEcCCCCcchH-HHHHHhhh----
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---------PAG-GHIVTTTDCYRKTR-IFIETVLP---- 271 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all---------~~G-D~VIv~~~~Y~~t~-~~l~~~l~---- 271 (451)
+.++...+|+++|++++|.+.+++++||++|+..++..+. .+| |+||+.++.|.+.. ..+ ....
T Consensus 115 ~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~-~~~g~~~~ 193 (439)
T 2oat_A 115 FYNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAI-SSSTDPTS 193 (439)
T ss_dssp SEESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHH-TTCCCHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHh-hcCCChhc
Confidence 4567889999999999998888999999999999998765 357 89999999997643 222 1111
Q ss_pred -----cCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccc----cHHHHHHHHHhcCCEEEEecCCCCC-C--
Q 013019 272 -----KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATP-L-- 339 (451)
Q Consensus 272 -----~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~----DL~~IaelA~~~g~~lVVD~tfa~~-~-- 339 (451)
.....+..++..|+++|+++++..++++|++|..+|++|.+. ++++|.++|++||++||+||++... .
T Consensus 194 ~~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g 273 (439)
T 2oat_A 194 YDGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG 273 (439)
T ss_dssp HTTSCSCCTTEEEECSSCHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS
T ss_pred ccCCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC
Confidence 111355667777999999999533589999987777889776 7999999999999999999998421 1
Q ss_pred ---ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHH--HHHHHH
Q 013019 340 ---NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQN 414 (451)
Q Consensus 340 ---~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~--Rl~~~~ 414 (451)
..+......|++ |++|.+++ |...+|++++++++++.++..........++..+..++..++.+.. ..++..
T Consensus 274 ~~~~~~~~~~~~Di~--t~sK~l~~-G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 350 (439)
T 2oat_A 274 RWLAVDYENVRPDIV--LLGKALSG-GLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENAD 350 (439)
T ss_dssp SSSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred cchhHHHhCCCCcEE--EecccccC-CCCCeEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 112223346876 78999986 3246899999998877665422222234467776666666665542 356666
Q ss_pred HHHHHHHHHHHcC
Q 013019 415 STALRMAEILEAH 427 (451)
Q Consensus 415 ~nA~~Lae~L~~~ 427 (451)
++.+.+.+.|++.
T Consensus 351 ~~~~~l~~~L~~l 363 (439)
T 2oat_A 351 KLGIILRNELMKL 363 (439)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHh
Confidence 7788888888764
No 175
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.80 E-value=2.7e-18 Score=189.48 Aligned_cols=219 Identities=11% Similarity=0.031 Sum_probs=159.4
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
+++...++|+.+|+++|++.++++++|+ +|+.+++++++++||+|+++.++|.+.+.. .+...|+++.+++.
T Consensus 171 ~~~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~---~~~l~Ga~~v~v~~~~~~ 247 (730)
T 1c4k_A 171 HEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNS---ALAMAGGRPVYLQTNRNP 247 (730)
T ss_dssp TBTHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH---HTTTTCCEEEEECEEECT
T ss_pred ChHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHH---HHHHCCCEEEEEeCCccc
Confidence 4567889999999999999999999998 899999999999999999999999886643 14556887776642
Q ss_pred ------CCHHHH-----HHhhcCCC-----e----EEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc--
Q 013019 283 ------ADMEGL-----EAALNNNN-----V----SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-- 340 (451)
Q Consensus 283 ------~D~d~L-----e~ai~~~~-----t----klV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-- 340 (451)
.|+++| ++++++++ + ++|++++| ||+|.+.|+++|+++|+++|++|++|++|+....
T Consensus 248 ~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~ 326 (730)
T 1c4k_A 248 YGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFI 326 (730)
T ss_dssp TCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSS
T ss_pred cCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccC
Confidence 266777 88887631 4 89999998 5899999999999999999999999999875321
Q ss_pred -----cccccC---CCc----EEEECCcccCCccccceeEEEEeCHHHH---------HHHHHHhHhhC-CCccHHHHHH
Q 013019 341 -----QKALSL---GAD----LVLHSATKFIGGHNDVLAGSISGSGKLV---------TQIRNLHHVLG-GALNPNAAYL 398 (451)
Q Consensus 341 -----~~pl~~---GaD----iVv~S~SK~l~G~gdv~gG~Iv~~~eli---------~~lr~~~~~~G-~~ls~~~a~l 398 (451)
..++.. |+| +++.|+||+++|++ .+|++..+++.+ .+++....... +.++......
T Consensus 327 ~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~--~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaa 404 (730)
T 1c4k_A 327 PMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAA 404 (730)
T ss_dssp GGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHH
T ss_pred cccCCcCcccccccCCCCCCEEEEECCCCCCCCCC--CEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHH
Confidence 123433 888 99999999999875 467775433221 23333322222 2333322211
Q ss_pred ---HHHhhH--HHHHHHHHHHHHHHHHHHHHHc-CCCeEE
Q 013019 399 ---IIRGMK--TLHLRVQQQNSTALRMAEILEA-HPKVLL 432 (451)
Q Consensus 399 ---~lrgL~--tl~~Rl~~~~~nA~~Lae~L~~-~p~V~~ 432 (451)
+.+.++ ....++++..++++.+.+.|++ .++++.
T Consensus 405 l~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v 444 (730)
T 1c4k_A 405 LDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRP 444 (730)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEE
Confidence 111122 2355678888999999999998 677754
No 176
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.79 E-value=3.7e-18 Score=172.52 Aligned_cols=213 Identities=15% Similarity=0.103 Sum_probs=145.8
Q ss_pred hhHHHHHHHHHhhh-CC----CcEEE--eCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 210 PTTVVVEEKMSALE-GA----ESTVI--MASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 210 pt~~~Lee~LA~l~-ga----e~~vv--~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
....+|+++|++++ +. ++.++ +++|++|+.+++..+.. +||+|+++.+.|.+....+ ...|.++..+
T Consensus 69 ~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~ 144 (394)
T 2ay1_A 69 SGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIM----NFMGLPVQTY 144 (394)
T ss_dssp SCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHH----HHHTCCEEEE
T ss_pred CCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHcCCceEEE
Confidence 34577889998886 42 45666 77788999999887755 9999999999999866443 3456666665
Q ss_pred CC-------CCHHHHHHhhcCC--CeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc-----cc
Q 013019 281 DP-------ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KA 343 (451)
Q Consensus 281 d~-------~D~d~Le~ai~~~--~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~-----~p 343 (451)
+. .|+++|++++++. +++++++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .+
T Consensus 145 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 224 (394)
T 2ay1_A 145 RYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAG 224 (394)
T ss_dssp ECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHH
T ss_pred ecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHH
Confidence 54 2789999998753 3678888999999999985 668899999999999999998764321 11
Q ss_pred ---c-cCC-CcEEEECCcccCCccccceeEEEEe---CHHHHHHHHH----HhHhhCCCccHHHHHHHHHhhH-------
Q 013019 344 ---L-SLG-ADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRN----LHHVLGGALNPNAAYLIIRGMK------- 404 (451)
Q Consensus 344 ---l-~~G-aDiVv~S~SK~l~G~gdv~gG~Iv~---~~eli~~lr~----~~~~~G~~ls~~~a~l~lrgL~------- 404 (451)
+ ..+ .++++.|+||.++.+| .+.|++++ ++++++++.. .........++..++.+...|+
T Consensus 225 ~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~ 303 (394)
T 2ay1_A 225 TRLIASRIPEVLIAASCSKNFGIYR-ERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRAD 303 (394)
T ss_dssp HHHHHHHCSSEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHH
T ss_pred HHHHhhcCCCEEEEEeccCCCcCcC-CccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHH
Confidence 1 123 3477999999998665 46788887 6766554332 2222212224444443333332
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHcC
Q 013019 405 ---TLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 405 ---tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
.+....++..++.+.+.+.|+++
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (394)
T 2ay1_A 304 WMAELEAVRSGMLRLREQLAGELRDL 329 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33344555666777777777765
No 177
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.67 E-value=4.3e-21 Score=194.66 Aligned_cols=215 Identities=17% Similarity=0.144 Sum_probs=151.1
Q ss_pred HHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 212 TVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 212 ~~~Lee~LA~l~----g----ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
...|++.+++++ | .++.+++++|++|+..++.+++++||+|++..+.|.+....+ ...|.++..++.
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~~ 143 (392)
T 3b1d_A 68 SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSV----RLNNRKLVSNSLK 143 (392)
Confidence 556777777654 3 244555566679999999999999999999999999866433 344555554432
Q ss_pred -------CCHHHHHHhhcCCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCcc----ccc----
Q 013019 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL---- 344 (451)
Q Consensus 283 -------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~~----~pl---- 344 (451)
.|+++|++++++.++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .++
T Consensus 144 ~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 223 (392)
T 3b1d_A 144 EENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVS 223 (392)
Confidence 47788998887335899999999999999875 889999999999999999998653211 011
Q ss_pred c--CCCcEEEECCcccCCccccceeEEEEeCH-HHHHHHHHHhHhhC-CCccHHHHHHHHHhhH----HHHHHHHHHHHH
Q 013019 345 S--LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLG-GALNPNAAYLIIRGMK----TLHLRVQQQNST 416 (451)
Q Consensus 345 ~--~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~-eli~~lr~~~~~~G-~~ls~~~a~l~lrgL~----tl~~Rl~~~~~n 416 (451)
. .+.++++.|+||.++.+| .+.|++++++ +++++++.....++ ...++..++.+...++ .+....++..++
T Consensus 224 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 302 (392)
T 3b1d_A 224 PDFKDFALVLSSATKTFNIAG-TKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEEN 302 (392)
Confidence 1 345689999999997565 5678888764 58888877665543 1334444443333332 233444556677
Q ss_pred HHHHHHHHHc-CCCeE
Q 013019 417 ALRMAEILEA-HPKVL 431 (451)
Q Consensus 417 A~~Lae~L~~-~p~V~ 431 (451)
.+.+.+.|++ +|++.
T Consensus 303 ~~~l~~~l~~~~~~~~ 318 (392)
T 3b1d_A 303 IQFAVEYFAQEAPRLK 318 (392)
Confidence 7788888877 56553
No 178
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.79 E-value=3.7e-18 Score=176.76 Aligned_cols=215 Identities=15% Similarity=0.170 Sum_probs=149.8
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc----CCCe---EEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP----AGGH---IVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~----~GD~---VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
..+...+|+++|+++++.++++++++|++|+.+++.+++. +||+ |+++.+.|+.+...+ ...|.++..+
T Consensus 74 ~~~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~----~~~g~~~~~~ 149 (467)
T 1ax4_A 74 GSRNYYDLKDKAKELFNYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHV----ELNGCKAINI 149 (467)
T ss_dssp SCHHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHH----HHTTCEEEEC
T ss_pred cCccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHH----hccCCceecc
Confidence 3577889999999999998889999999999999999988 9999 999855545444333 3345554432
Q ss_pred C---------------CCCHHHHHHhhcC---CCeEEEEEeCCCCCc-ccccc---HHHHHHHHHhcCCEEEEecCCCC-
Q 013019 281 D---------------PADMEGLEAALNN---NNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT- 337 (451)
Q Consensus 281 d---------------~~D~d~Le~ai~~---~~tklV~lesPsNPt-G~v~D---L~~IaelA~~~g~~lVVD~tfa~- 337 (451)
+ ..|+++|++++++ .++++|++++|+||+ |.+.+ +++|.++|++||++||+|+++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~ 229 (467)
T 1ax4_A 150 VTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCE 229 (467)
T ss_dssp BCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHH
T ss_pred cccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhh
Confidence 1 1379999999974 249999999999999 77754 68999999999999999998432
Q ss_pred ----------CCc-ccccc------CCCcEEEECCcccCCccccceeEEEEeC-H-HHHHHHHHHhHhhCC-----CccH
Q 013019 338 ----------PLN-QKALS------LGADLVLHSATKFIGGHNDVLAGSISGS-G-KLVTQIRNLHHVLGG-----ALNP 393 (451)
Q Consensus 338 ----------~~~-~~pl~------~GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~-eli~~lr~~~~~~G~-----~ls~ 393 (451)
... ....+ .++|+++.|+||.++.+ .||+++++ + +++++++..+..++. ..+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (467)
T 1ax4_A 230 NAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLN---IGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAG 306 (467)
T ss_dssp HHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCS---SCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCH
T ss_pred cchhccccccccCCCchhhhhhhhccccceEEEeccccCCCC---cceEEEeCCHHHHHHHHHhhccccccccccCCccc
Confidence 111 11111 24789999999998765 46888887 7 888887765443221 1222
Q ss_pred HHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHcCCCe
Q 013019 394 NAAYLIIRGMKTL--HLRVQQQNSTALRMAEILEAHPKV 430 (451)
Q Consensus 394 ~~a~l~lrgL~tl--~~Rl~~~~~nA~~Lae~L~~~p~V 430 (451)
.....+..+++.+ ..++++..++++.+.+.|++ +++
T Consensus 307 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~~ 344 (467)
T 1ax4_A 307 RDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLRE-AGI 344 (467)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH-TTC
T ss_pred hHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh-CCC
Confidence 2112111233322 12555666778889999987 344
No 179
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.79 E-value=1.3e-17 Score=172.68 Aligned_cols=217 Identities=17% Similarity=0.177 Sum_probs=148.2
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc---------cCC-CeEEEcCCCCcchHHHHHHhhh-----
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---------PAG-GHIVTTTDCYRKTRIFIETVLP----- 271 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all---------~~G-D~VIv~~~~Y~~t~~~l~~~l~----- 271 (451)
+.++...+|+++|+++.|.+.+++++||++|+..++..+. .+| |+||+.++.|.+..........
T Consensus 104 ~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~ 183 (433)
T 1z7d_A 104 FFSVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCT 183 (433)
T ss_dssp SEEHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC------------------
T ss_pred cCCHHHHHHHHHHHhhcCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCcccc
Confidence 5677889999999999998889999999999999988754 367 9999999999774321111111
Q ss_pred ----cCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccc----cHHHHHHHHHhcCCEEEEecCCCCC-C---
Q 013019 272 ----KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATP-L--- 339 (451)
Q Consensus 272 ----~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~----DL~~IaelA~~~g~~lVVD~tfa~~-~--- 339 (451)
.....+..++..|+++|+++++..++++|++|..+|++|.+. ++++|.++|+++|++||+||++... .
T Consensus 184 ~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~ 263 (433)
T 1z7d_A 184 SNFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK 263 (433)
T ss_dssp --------CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred ccCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCc
Confidence 011345566777999999999433589999987777889876 7999999999999999999998532 1
Q ss_pred --ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHHHHH--HHHHHHH
Q 013019 340 --NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNS 415 (451)
Q Consensus 340 --~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~tl~~--Rl~~~~~ 415 (451)
.........|++ |++|.+++ |...+|++++++++++.++..........++..+..++..|+.+.. ..++..+
T Consensus 264 ~~~~~~~~~~~di~--t~sK~l~~-G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 340 (433)
T 1z7d_A 264 LLCVHHYNVKPDVI--LLGKALSG-GHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEK 340 (433)
T ss_dssp SSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred chhhHhcCCCCCEE--EECccccC-CCCCeEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 112223346876 78899985 3246899999998877665422222224567766666666665532 3455566
Q ss_pred HHHHHHHHHHc
Q 013019 416 TALRMAEILEA 426 (451)
Q Consensus 416 nA~~Lae~L~~ 426 (451)
+.+.+.+.|++
T Consensus 341 ~~~~l~~~L~~ 351 (433)
T 1z7d_A 341 LGGPFLENLKR 351 (433)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 67777776654
No 180
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.79 E-value=4e-18 Score=173.47 Aligned_cols=215 Identities=11% Similarity=0.087 Sum_probs=143.7
Q ss_pred hhHHHHHHHHHhh--hC-C--CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE-EEEeCCC
Q 013019 210 PTTVVVEEKMSAL--EG-A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT-ATVIDPA 283 (451)
Q Consensus 210 pt~~~Lee~LA~l--~g-a--e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~-v~~vd~~ 283 (451)
+....|+++|+++ .| . ++.++++++++++..++ .++.+||+|++++|.|.+.... +...|.+ +..++..
T Consensus 75 ~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~~-~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~~ 149 (400)
T 3asa_A 75 FGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRLL-SFFGPNQTVAIQDPSYPAYLDI----ARLTGAKEIIALPCL 149 (400)
T ss_dssp TCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHHH-HHHCSSCEEEEEESCCHHHHHH----HHHTTCSEEEEEECC
T ss_pred CCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHHH-HHcCCCCEEEECCCCcHHHHHH----HHHcCCcceEecccc
Confidence 4567899999998 46 2 45666666678888754 5668999999999999886543 3445766 6666542
Q ss_pred CHHHHHHhhcC-CCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCCCCc-----cccccC----CCcE
Q 013019 284 DMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSL----GADL 350 (451)
Q Consensus 284 D~d~Le~ai~~-~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~~~~-----~~pl~~----GaDi 350 (451)
+.+.+...+++ .++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... .....+ +.++
T Consensus 150 ~~~~~~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i 229 (400)
T 3asa_A 150 QENAFFPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAI 229 (400)
T ss_dssp GGGTTCCCCCTTCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEE
T ss_pred hhcCcccChhhccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceE
Confidence 11111111111 24899999999999999986 66789999999999999999874211 111122 2358
Q ss_pred EEECCcccCCccccceeEEEEeCHHH-------HHHHHHHhH-hhCCCccHHHHHHHHHhhHH--HHHHHHHHHHHHHHH
Q 013019 351 VLHSATKFIGGHNDVLAGSISGSGKL-------VTQIRNLHH-VLGGALNPNAAYLIIRGMKT--LHLRVQQQNSTALRM 420 (451)
Q Consensus 351 Vv~S~SK~l~G~gdv~gG~Iv~~~el-------i~~lr~~~~-~~G~~ls~~~a~l~lrgL~t--l~~Rl~~~~~nA~~L 420 (451)
++.|+||.++.+| .+.|++++++++ ++++..... ......++.....+...++. +....++..++.+.+
T Consensus 230 ~~~s~sK~~g~~G-lriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l 308 (400)
T 3asa_A 230 EINSFSKPLGFAG-IRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLL 308 (400)
T ss_dssp EEEECCGGGTTTT-CCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred EEecchhhcCCcc-hheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 8999999998665 568999998887 666543222 22223455554444444443 334456666788888
Q ss_pred HHHHHcCCCeE
Q 013019 421 AEILEAHPKVL 431 (451)
Q Consensus 421 ae~L~~~p~V~ 431 (451)
.+.|++. ++.
T Consensus 309 ~~~L~~~-g~~ 318 (400)
T 3asa_A 309 RKALLAT-GFE 318 (400)
T ss_dssp HHHHHHT-TCE
T ss_pred HHHHHHC-CCe
Confidence 8999876 443
No 181
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.79 E-value=1.1e-17 Score=170.10 Aligned_cols=207 Identities=17% Similarity=0.183 Sum_probs=138.1
Q ss_pred HHHHHHhhhCCCcEE-EeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHH-hhhcCCcEEEEeCC------CCHH
Q 013019 215 VEEKMSALEGAESTV-IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVIDP------ADME 286 (451)
Q Consensus 215 Lee~LA~l~gae~~v-v~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~-~l~~~Gi~v~~vd~------~D~d 286 (451)
.++.+++++|.+... ++++|++|+..++.+++++||+|+++++.|++....... .....++....++. .|++
T Consensus 83 a~~~~~~~~~~~~~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~ 162 (425)
T 3ecd_A 83 AIERVKRLFNAGHANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYD 162 (425)
T ss_dssp HHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCHH
T ss_pred HHHHHHHHhCCCCceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHH
Confidence 457888999987774 489999999999999999999999999999873211111 11222334444442 3899
Q ss_pred HHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC-----CccccccCCCcEEEECCcccCCc
Q 013019 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-----LNQKALSLGADLVLHSATKFIGG 361 (451)
Q Consensus 287 ~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~-----~~~~pl~~GaDiVv~S~SK~l~G 361 (451)
+|++++++.++++|++++|+|| ...++++|.++|+++|++||+|+++..+ ....++.. +|+++.|+||+++|
T Consensus 163 ~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~-~di~~~s~sK~l~g 239 (425)
T 3ecd_A 163 QVEALAQQHKPSLIIAGFSAYP--RKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH-AHVVTSTTHKTLRG 239 (425)
T ss_dssp HHHHHHHHHCCSEEEEECSCCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-CSEEEEESSGGGCC
T ss_pred HHHHHHhhcCCcEEEEccccCC--CcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc-CcEEEecCCcccCC
Confidence 9999997434899999999985 5679999999999999999999995332 11223333 79999999999977
Q ss_pred cccceeEEEEeC-HHHHHHHHHHhHhh--CCCccHHHH--HHHH-Hhh-HHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 362 HNDVLAGSISGS-GKLVTQIRNLHHVL--GGALNPNAA--YLII-RGM-KTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 362 ~gdv~gG~Iv~~-~eli~~lr~~~~~~--G~~ls~~~a--~l~l-rgL-~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
+ ++|+++++ +++.+.++...... +....+..+ ..++ ..+ +.+....++..++++.+.+.|++.
T Consensus 240 ~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (425)
T 3ecd_A 240 P---RGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG 309 (425)
T ss_dssp C---SCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred C---CcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC
Confidence 6 37999987 56767666543221 122222222 1111 122 445566777888888999999874
No 182
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.78 E-value=6.8e-18 Score=177.90 Aligned_cols=220 Identities=13% Similarity=0.132 Sum_probs=157.5
Q ss_pred hhHHHH----HHHHHhhhCCC----cEEEeCCHHHHHHHHHHHHcc--------CC-----C-eEEEcCCCCcchHHHHH
Q 013019 210 PTTVVV----EEKMSALEGAE----STVIMASGMSASTVMLLALVP--------AG-----G-HIVTTTDCYRKTRIFIE 267 (451)
Q Consensus 210 pt~~~L----ee~LA~l~gae----~~vv~sSG~aAi~~al~all~--------~G-----D-~VIv~~~~Y~~t~~~l~ 267 (451)
|....+ .+++++++|.+ ..+++++|++|+..++.++.. +| + +|+++++.|.+....+.
T Consensus 128 ~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~ 207 (504)
T 2okj_A 128 PVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGA 207 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHH
Confidence 554444 45668888864 567778888999999888753 57 6 79999999988665443
Q ss_pred HhhhcCCc-EEEEeCCC-----CHHHHHHhhcCC-----CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 268 TVLPKMGI-TATVIDPA-----DMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 268 ~~l~~~Gi-~v~~vd~~-----D~d~Le~ai~~~-----~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
. +. .|. ++..++.+ |+++|+++|++. ++++|++++|+||+|.+.|+++|+++|+++|+++++|++|+
T Consensus 208 ~-~g-~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~ 285 (504)
T 2okj_A 208 A-LG-FGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWG 285 (504)
T ss_dssp H-TT-SCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTG
T ss_pred H-cC-CCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhh
Confidence 2 21 233 67777643 899999999751 38999999999999999999999999999999999999987
Q ss_pred CCCcc-----cccc--CCCcEEEECCcccCCccccceeEEEEeCH-HHHHHHHHH-hHhh-CC-----------------
Q 013019 337 TPLNQ-----KALS--LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNL-HHVL-GG----------------- 389 (451)
Q Consensus 337 ~~~~~-----~pl~--~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~-eli~~lr~~-~~~~-G~----------------- 389 (451)
.+... ..+. .++|+++.|+||+++++. .+|+++.++ +++++.... ...+ +.
T Consensus 286 ~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~--~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 363 (504)
T 2okj_A 286 GGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLL--QCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQC 363 (504)
T ss_dssp GGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCS--CCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCS
T ss_pred hHHHhCHhhHhhcCCcccCCEEEECchhhcCCCc--ceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCC
Confidence 65332 1222 268999999999999764 478877765 455542211 1111 10
Q ss_pred --CccHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Q 013019 390 --ALNPNAAYLIIRGM--KTLHLRVQQQNSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 390 --~ls~~~a~l~lrgL--~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V 433 (451)
.......|++++.+ +.+..++++..++++.+.+.|++.|+++.+
T Consensus 364 ~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 411 (504)
T 2okj_A 364 GRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMV 411 (504)
T ss_dssp SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEES
T ss_pred CCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 11355556655544 456667888889999999999998887543
No 183
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.78 E-value=1.2e-17 Score=176.67 Aligned_cols=215 Identities=16% Similarity=0.192 Sum_probs=155.2
Q ss_pred HHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc-------c-CCC------eEEEcCCCCcchHHHHHHhhhcCCc-
Q 013019 213 VVVEEKMSALEGAE--STVIMASGMSASTVMLLALV-------P-AGG------HIVTTTDCYRKTRIFIETVLPKMGI- 275 (451)
Q Consensus 213 ~~Lee~LA~l~gae--~~vv~sSG~aAi~~al~all-------~-~GD------~VIv~~~~Y~~t~~~l~~~l~~~Gi- 275 (451)
.+++++|++++|.+ ..+++++|++|+..++.++. + +|| +|++++..|.+....+. ..|+
T Consensus 151 ~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~----~~g~g 226 (515)
T 2jis_A 151 EEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAA----FLGLG 226 (515)
T ss_dssp HHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHH----HTTSC
T ss_pred HHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHH----HcCCC
Confidence 45667799999974 67778888899988887763 2 576 89999989988765442 3344
Q ss_pred --EEEEeCC-----CCHHHHHHhhcCC-----CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcccc
Q 013019 276 --TATVIDP-----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA 343 (451)
Q Consensus 276 --~v~~vd~-----~D~d~Le~ai~~~-----~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~p 343 (451)
++..++. .|+++|+++|++. ++++|++++|+|++|.+.|+++|+++|+++|+++++|++++.+....+
T Consensus 227 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~ 306 (515)
T 2jis_A 227 TDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQ 306 (515)
T ss_dssp GGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCT
T ss_pred CCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhCh
Confidence 6777764 3799999999751 389999999999999999999999999999999999999876543221
Q ss_pred -----cc-C-CCcEEEECCcccCCccccceeEEEEeCHH--HHHHHH----HHhHh-----------------hCCCccH
Q 013019 344 -----LS-L-GADLVLHSATKFIGGHNDVLAGSISGSGK--LVTQIR----NLHHV-----------------LGGALNP 393 (451)
Q Consensus 344 -----l~-~-GaDiVv~S~SK~l~G~gdv~gG~Iv~~~e--li~~lr----~~~~~-----------------~G~~ls~ 393 (451)
+. . ++|+++.|++|+++++. .+|+++.+++ ++++.. .+... .+.....
T Consensus 307 ~~~~~~~g~~~aD~v~~s~hK~l~~p~--g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~a 384 (515)
T 2jis_A 307 THRHLLDGIQRADSVAWNPHKLLAAGL--QCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDC 384 (515)
T ss_dssp TTGGGGTTGGGCSEEEECTTSTTCCCS--CCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCH
T ss_pred hhHhhcCCCccCCEEEECcccccCCCC--CeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccH
Confidence 22 2 78999999999998764 3677777655 655421 11100 0111224
Q ss_pred HHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Q 013019 394 NAAYLIIRGM--KTLHLRVQQQNSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 394 ~~a~l~lrgL--~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V 433 (451)
...|++++.+ +.+...+++..++++.+.+.|++.|+++.+
T Consensus 385 l~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 426 (515)
T 2jis_A 385 LKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELV 426 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEES
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 5555555433 456667788889999999999998887543
No 184
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.78 E-value=7.3e-18 Score=186.89 Aligned_cols=215 Identities=13% Similarity=0.081 Sum_probs=157.7
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 207 YGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~gae~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
........+++.+++++|.+..+++++|+ +|+.+++.+++++||+|++++++|.+.+..+ ...|+++.+++.
T Consensus 202 ~~~g~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~----~~~G~~~v~v~~~~~ 277 (755)
T 2vyc_A 202 DHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGL----MLTGAKPVYMVPSRN 277 (755)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHH----HHHCCEEEEECCCBC
T ss_pred cCccHHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHH----HHcCCEEEEEeCCCC
Confidence 34566788999999999999888899997 8899999999999999999999999876543 345888777653
Q ss_pred -------C-----CHHHHHHhhcCC-CeE--------EEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-
Q 013019 283 -------A-----DMEGLEAALNNN-NVS--------LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN- 340 (451)
Q Consensus 283 -------~-----D~d~Le~ai~~~-~tk--------lV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~- 340 (451)
. |+++|+++++++ +++ +|++++| ||+|.+.|+++|+++|+++|++|++|++++....
T Consensus 278 ~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~ 356 (755)
T 2vyc_A 278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARF 356 (755)
T ss_dssp TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGG
T ss_pred ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhccc
Confidence 2 899999998642 244 8999998 6999999999999999999999999999875321
Q ss_pred ------cccccCC--CcE------EEECCcccCCccccceeEEEEeCHH--HH--HHHHHHhHhhC-CCccHHHHHHHHH
Q 013019 341 ------QKALSLG--ADL------VLHSATKFIGGHNDVLAGSISGSGK--LV--TQIRNLHHVLG-GALNPNAAYLIIR 401 (451)
Q Consensus 341 ------~~pl~~G--aDi------Vv~S~SK~l~G~gdv~gG~Iv~~~e--li--~~lr~~~~~~G-~~ls~~~a~l~lr 401 (451)
..++ .| +|+ +++|+||+++|++ .+|+++.+++ .+ .+++.....+. ..++......+..
T Consensus 357 ~~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L~g~~--~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~a 433 (755)
T 2vyc_A 357 NPIYADHYAM-RGEPGDHNGPTVFATHSTHKLLNALS--QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDV 433 (755)
T ss_dssp CGGGTTSSSS-CSCCCCCSSBEEEEEEETTTSSSCCT--TCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHH
T ss_pred CcccCCcchh-cCCcCCccCCCeEEEECccccccCcC--CeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 1233 57 787 9999999999875 4677766543 22 33333322232 2333322221111
Q ss_pred hhH---H--HHHHHHHHHHHHHHHHHHHHcCCC
Q 013019 402 GMK---T--LHLRVQQQNSTALRMAEILEAHPK 429 (451)
Q Consensus 402 gL~---t--l~~Rl~~~~~nA~~Lae~L~~~p~ 429 (451)
+++ . ...++++..++++.+.+.|++.++
T Consensus 434 A~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 434 AVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp HHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 222 1 345778888899999999987665
No 185
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.78 E-value=7.4e-18 Score=176.50 Aligned_cols=218 Identities=15% Similarity=0.153 Sum_probs=154.8
Q ss_pred chhHHHHHH----HHHhhhCCCc-----------EEEeCCHHHHHHHHHHHHccC---------CC--------e--EEE
Q 013019 209 NPTTVVVEE----KMSALEGAES-----------TVIMASGMSASTVMLLALVPA---------GG--------H--IVT 254 (451)
Q Consensus 209 npt~~~Lee----~LA~l~gae~-----------~vv~sSG~aAi~~al~all~~---------GD--------~--VIv 254 (451)
.|....+|+ ++++++|.+. .+++++|++|+..++.++... || + |++
T Consensus 108 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~ 187 (486)
T 1js3_A 108 SPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYA 187 (486)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEE
T ss_pred ChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEE
Confidence 455555554 5577778642 678889999998888776421 43 4 788
Q ss_pred cCCCCcchHHHHHHhhhcCCcEEEEeCC-----CCHHHHHHhhcCCCe------EEEEEeCCCCCccccccHHHHHHHHH
Q 013019 255 TTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNV------SLFFTESPTNPFLRCVDVKLVSDLCH 323 (451)
Q Consensus 255 ~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-----~D~d~Le~ai~~~~t------klV~lesPsNPtG~v~DL~~IaelA~ 323 (451)
+.+.|.+... .+...|++++.++. .|+++|+++|+++ + .+|++++|+||+|.+.|+++|+++|+
T Consensus 188 s~~~h~s~~~----~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~-~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~ 262 (486)
T 1js3_A 188 SDQAHSSVER----AGLIGGVKLKAIPSDGKFAMRASALQEALERD-KAAGLIPFFVVATLGTTSCCSFDNLLEVGPICH 262 (486)
T ss_dssp ETTCCHHHHH----HHHHHTCEEEEECCCTTSCCCHHHHHHHHHHH-HHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred CCCCcHHHHH----HHHhCCCceEEeecCCCCCCCHHHHHHHHHHH-HhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 9999987553 34456888888875 3899999999764 4 38999999999999999999999999
Q ss_pred hcCCEEEEecCCCCCCcc----ccc---cCCCcEEEECCcccCCccccceeEEEEeCH-HH-HHHHHHHhHh--------
Q 013019 324 KKGAIVCIDGTFATPLNQ----KAL---SLGADLVLHSATKFIGGHNDVLAGSISGSG-KL-VTQIRNLHHV-------- 386 (451)
Q Consensus 324 ~~g~~lVVD~tfa~~~~~----~pl---~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~-el-i~~lr~~~~~-------- 386 (451)
++|+++++|++|+.+... +.+ -.++|+++.|+||+++++. .+|+++.++ ++ .+.+.....+
T Consensus 263 ~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~--~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~ 340 (486)
T 1js3_A 263 EEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNF--DCSAMWVKRRTDLTGAFKLDPVYLKHSHQGS 340 (486)
T ss_dssp HTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCS--SCEEEEESCHHHHHGGGC------------C
T ss_pred HcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCc--ceEEEEEeCHHHHHHHhcCCchhhCCCcccc
Confidence 999999999998764321 111 1268999999999998763 467777754 33 3333110000
Q ss_pred ------------hCCCccHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Q 013019 387 ------------LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 387 ------------~G~~ls~~~a~l~lr--gL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V 433 (451)
.+........|.+++ +.+.+..++++..++++.+.+.|++.|+++.+
T Consensus 341 ~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 401 (486)
T 1js3_A 341 GLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVC 401 (486)
T ss_dssp CSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEC
T ss_pred cCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 011223445555544 45677888888999999999999999888654
No 186
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.77 E-value=6.6e-18 Score=170.80 Aligned_cols=217 Identities=16% Similarity=0.138 Sum_probs=150.7
Q ss_pred CchhHHHHH----HHHHhhhCCCcEEE-eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCC--cEEEEe
Q 013019 208 GNPTTVVVE----EKMSALEGAESTVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVI 280 (451)
Q Consensus 208 ~npt~~~Le----e~LA~l~gae~~vv-~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~G--i~v~~v 280 (451)
+++....|+ +++++++|.+...+ +++|++|+..++.+++++||+|+++++.|+.+..... .+...| +++..+
T Consensus 63 ~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~~~~ 141 (405)
T 2vi8_A 63 GCEYVDIVEELARERAKQLFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGS-PVNFSGVQYNFVAY 141 (405)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTC-TTSHHHHHSEEEEE
T ss_pred cchHHHHHHHHHHHHHHHHhCCCceEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccc-hhhhccceeEEEec
Confidence 446666666 59999999876654 6899999999999999999999999999987542100 001112 244444
Q ss_pred C------CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC---cccccc-CCCcE
Q 013019 281 D------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL---NQKALS-LGADL 350 (451)
Q Consensus 281 d------~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~---~~~pl~-~GaDi 350 (451)
+ ..|+++|++++++.++++|++ +|+|+ |...|+++|.++|+++|+++|+|++++.+. ...+.. .+.|+
T Consensus 142 ~~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di 219 (405)
T 2vi8_A 142 GVDPETHVIDYDDVREKARLHRPKLIVA-AAAAY-PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHF 219 (405)
T ss_dssp CBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSE
T ss_pred ccccccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-CccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCE
Confidence 3 247999999997523888888 55554 566789999999999999999999986321 111111 15799
Q ss_pred EEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhC-CCccHHHHHH---HHHhh--HHHHHHHHHHHHHHHHHHHHH
Q 013019 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG-GALNPNAAYL---IIRGM--KTLHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 351 Vv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G-~~ls~~~a~l---~lrgL--~tl~~Rl~~~~~nA~~Lae~L 424 (451)
++.|++|+++|+. ||+++++++++++++.....+. +..++..... +++.+ +.+....++..++++.+.+.|
T Consensus 220 ~~~s~sK~~~g~~---gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 296 (405)
T 2vi8_A 220 VTTTTHKTLRGPR---GGMILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASAL 296 (405)
T ss_dssp EEEESSSTTCCCS---CEEEEECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccCCCCC---CeEEEEcHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999998654 5999999999888876543222 2223332222 22221 244556777888899999999
Q ss_pred HcCCCeE
Q 013019 425 EAHPKVL 431 (451)
Q Consensus 425 ~~~p~V~ 431 (451)
++. ++.
T Consensus 297 ~~~-g~~ 302 (405)
T 2vi8_A 297 QNE-GFT 302 (405)
T ss_dssp HHT-TCE
T ss_pred HhC-CCe
Confidence 887 553
No 187
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.77 E-value=1.6e-17 Score=171.00 Aligned_cols=227 Identities=13% Similarity=0.072 Sum_probs=153.8
Q ss_pred CccccCCCchhHHHHHHHHHhhh--CC-CcEEEeCCHHHHHHHHHHHH--ccCCCeEEEcCCCCcchHHHHHHhhhc---
Q 013019 201 SFEYGRYGNPTTVVVEEKMSALE--GA-ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPK--- 272 (451)
Q Consensus 201 ~~~Y~R~~npt~~~Lee~LA~l~--ga-e~~vv~sSG~aAi~~al~al--l~~GD~VIv~~~~Y~~t~~~l~~~l~~--- 272 (451)
.+.+.++.++...+|+++|++++ +. ++.+++++|++|+..++.++ ..++++||+.++.|.+...........
T Consensus 77 ~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 156 (439)
T 3dxv_A 77 GATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQ 156 (439)
T ss_dssp CSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC------
T ss_pred CccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCch
Confidence 34456778899999999999998 44 57888899999999999875 346788888888886643222111000
Q ss_pred --------CCcEEEEeCCC----------CHHHHHHhhc---CCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCC
Q 013019 273 --------MGITATVIDPA----------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGA 327 (451)
Q Consensus 273 --------~Gi~v~~vd~~----------D~d~Le~ai~---~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~ 327 (451)
....+.+++.. |+++|+++++ ++++++|++|.++|++|.+.+ +++|.++|++||+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~ 236 (439)
T 3dxv_A 157 ADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGI 236 (439)
T ss_dssp -------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTC
T ss_pred hhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 00011222322 5899999993 335899999999999999988 9999999999999
Q ss_pred EEEEecCCCCC------CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHH
Q 013019 328 IVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR 401 (451)
Q Consensus 328 ~lVVD~tfa~~------~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lr 401 (451)
+||+||+|... ..........|++ |++|.+++ | .++|++++++++++.++........ .++..+..++.
T Consensus 237 ~li~DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G-~riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~a 311 (439)
T 3dxv_A 237 LVVCDEVKVGLARSGRLHCFEHEGFVPDIL--VLGKGLGG-G-LPLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLA 311 (439)
T ss_dssp EEEEECTTTCTTTTSSSSGGGGTTCCCSEE--EECGGGGT-T-SCCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHH
T ss_pred EEEEeccccCCCcCchhhHHHhcCCCCCEE--EEcchhcC-C-cceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHH
Confidence 99999998632 1112222335666 78999986 4 4789999999888776654322233 56766666555
Q ss_pred hhHHHH--HHHHHHHHHHHHHHHHHH----cCCCeEE
Q 013019 402 GMKTLH--LRVQQQNSTALRMAEILE----AHPKVLL 432 (451)
Q Consensus 402 gL~tl~--~Rl~~~~~nA~~Lae~L~----~~p~V~~ 432 (451)
.++.+. ..+++..++.+.+.+.|+ ++|.+..
T Consensus 312 al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 348 (439)
T 3dxv_A 312 VLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGD 348 (439)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEE
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 555432 234555566666655554 4566544
No 188
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.77 E-value=3.1e-18 Score=177.38 Aligned_cols=206 Identities=12% Similarity=0.105 Sum_probs=147.9
Q ss_pred HHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHH--------ccCCCeEEEcCCCCcchHHHHHHhhhcCCc
Q 013019 212 TVVVEEKMSALEG--------AESTVIMASGMSASTVMLLAL--------VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (451)
Q Consensus 212 ~~~Lee~LA~l~g--------ae~~vv~sSG~aAi~~al~al--------l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi 275 (451)
...|++.|+++++ .++.++++++++++.+++.++ +++||+|+++.|.|......+ +..|.
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~----~~~g~ 177 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQT----KYFDK 177 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHH----HHSCB
T ss_pred hHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHH----HHcCC
Confidence 5788999988875 134444445559999999999 899999999999998766444 33454
Q ss_pred EEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEEEC
Q 013019 276 TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHS 354 (451)
Q Consensus 276 ~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv~S 354 (451)
++.... .|+++|++++++ ++++|++++|+||||.+.+ + +++ ++..+.|+.+..+ .....+..+.++++.|
T Consensus 178 ~~~~~~-~d~~~l~~~~~~-~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S 248 (427)
T 2hox_A 178 KGYVWA-GNAANYVNVSNP-EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHYTPIKYKADEDILLFT 248 (427)
T ss_dssp TTEEEE-EEGGGGTTCSCG-GGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTTSCCCSCBCCSEEEEE
T ss_pred eeeeec-CCHHHHHHhhcC-CceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCCCccccCCCceEEEEe
Confidence 433222 367888888876 4899999999999999999 4 233 5678999886432 1111122467999999
Q ss_pred CcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCCccHHHHHHHHHhhHH---------------HHHHHHHHHHHHH
Q 013019 355 ATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---------------LHLRVQQQNSTAL 418 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~t---------------l~~Rl~~~~~nA~ 418 (451)
+||.++.+| .++|++++ +++++++++..+.......+...+.++...|+. +....++..++.+
T Consensus 249 ~SK~~g~~G-~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 327 (427)
T 2hox_A 249 MSKFTGHSG-SRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWV 327 (427)
T ss_dssp HHHHTSCGG-GCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHH
T ss_pred ChhcCCCCC-ceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHH
Confidence 999998776 57889988 589999999887766555666665554444443 2223456667788
Q ss_pred HHHHHHHcCCCeE
Q 013019 419 RMAEILEAHPKVL 431 (451)
Q Consensus 419 ~Lae~L~~~p~V~ 431 (451)
.+.+.|+++|++.
T Consensus 328 ~l~~~L~~~~g~~ 340 (427)
T 2hox_A 328 NITALLDQSDRFS 340 (427)
T ss_dssp HHHHHHTTSSSEE
T ss_pred HHHHHHHhCcCcc
Confidence 8999999887763
No 189
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.76 E-value=3.6e-18 Score=177.95 Aligned_cols=165 Identities=13% Similarity=0.140 Sum_probs=123.9
Q ss_pred ccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEe
Q 013019 202 FEYGRYGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~v 280 (451)
+....++.+...++++++++ +|.++.+++++|+ +|+.+++.+++++||+|++++++|.++...+. ..|.++.++
T Consensus 49 ~d~~~~~~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~----~~G~~~~~v 123 (446)
T 2x3l_A 49 LDDLHHPEEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALD----ISQQEGHFI 123 (446)
T ss_dssp SCCTTSCSSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHH----HHTCCEEEC
T ss_pred CccccCcchHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHH----HcCCeEEEE
Confidence 34444567778999999999 9987777877776 89999999999999999999999998765442 245555554
Q ss_pred CC-----------CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-----ccccc
Q 013019 281 DP-----------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQKAL 344 (451)
Q Consensus 281 d~-----------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-----~~~pl 344 (451)
+. .|+++| +.+ ++++|++++| |++|.+.|+++|.++|+++|+++|+|++++..+ .....
T Consensus 124 ~~~~~~~~~~~~~~d~~~l---~~~-~~~~v~~~~~-n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~ 198 (446)
T 2x3l_A 124 ETHQSPLTNHYNKVNLSRL---NND-GHKLVVLTYP-NYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTL 198 (446)
T ss_dssp EEEECTTTSSEEEEEC-----------CCEEEEESS-CTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGG
T ss_pred eCeeccccCcCCCCCHHHH---cCC-CceEEEEECC-CCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChH
Confidence 32 134555 344 4899999884 569999999999999999999999999987522 12334
Q ss_pred cCCCcEEEECCcccCCccccceeEEEEeCHHHHH
Q 013019 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT 378 (451)
Q Consensus 345 ~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~ 378 (451)
.+|+|+++.|+||+++++. .+|++++++++++
T Consensus 199 ~~g~Di~~~S~~K~l~~~~--g~g~l~~~~~~i~ 230 (446)
T 2x3l_A 199 NYQADYVVQSFHKTLPALT--MGSVLYIHKNAPY 230 (446)
T ss_dssp GGTCSEEEECHHHHSSSCT--TCEEEEEETTCTT
T ss_pred HcCCCEEEECCcccccccc--ccEEEEEcCCcCC
Confidence 5689999999999777653 3688888776644
No 190
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.75 E-value=4.3e-17 Score=166.35 Aligned_cols=216 Identities=14% Similarity=0.151 Sum_probs=144.4
Q ss_pred cCCCchhHHHHHHHHHhhh-C-C-CcEEEeCCHHHHHHHHHH---HHccCCCeEEEcCCCCcchHH-HHHHh-hh-----
Q 013019 205 GRYGNPTTVVVEEKMSALE-G-A-ESTVIMASGMSASTVMLL---ALVPAGGHIVTTTDCYRKTRI-FIETV-LP----- 271 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~-g-a-e~~vv~sSG~aAi~~al~---all~~GD~VIv~~~~Y~~t~~-~l~~~-l~----- 271 (451)
.++.++...+|+++|++++ | . ++.+++++|++|+..++. ++.++| +|++.++.|.+... .+... ..
T Consensus 79 ~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~ 157 (426)
T 1sff_A 79 QVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSA 157 (426)
T ss_dssp TTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTT
T ss_pred cccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCcccccc
Confidence 3456788899999999999 5 3 556677788899999987 667776 89999999977443 22211 00
Q ss_pred cCCc---EEEEeCCC----------CHHHHHHhhcC----CCeEEEEEe-CCCCCcccccc----HHHHHHHHHhcCCEE
Q 013019 272 KMGI---TATVIDPA----------DMEGLEAALNN----NNVSLFFTE-SPTNPFLRCVD----VKLVSDLCHKKGAIV 329 (451)
Q Consensus 272 ~~Gi---~v~~vd~~----------D~d~Le~ai~~----~~tklV~le-sPsNPtG~v~D----L~~IaelA~~~g~~l 329 (451)
.++. .+..++.. |+++|++++++ .++++|+++ +++| ||...+ +++|.++|++||++|
T Consensus 158 ~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~l 236 (426)
T 1sff_A 158 GMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIML 236 (426)
T ss_dssp TSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEE
T ss_pred ccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEE
Confidence 1111 14334331 68899988862 248888885 3567 997777 999999999999999
Q ss_pred EEecCCCCCCc------cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhh
Q 013019 330 CIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM 403 (451)
Q Consensus 330 VVD~tfa~~~~------~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL 403 (451)
|+|++|..... ........|++ |+||.+++ | ++.|++++++++++.++..........++..+..+...|
T Consensus 237 i~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~-G-lriG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal 312 (426)
T 1sff_A 237 IADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSIAG-G-FPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVL 312 (426)
T ss_dssp EEECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGGGT-S-SCCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHH
T ss_pred EEechhhccCcccchhhhhhcCCCCCEE--EEcccccC-C-CceEEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHH
Confidence 99999874211 11122235655 88999997 5 678999999888776653222222345666666666555
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHc
Q 013019 404 KTLHL--RVQQQNSTALRMAEILEA 426 (451)
Q Consensus 404 ~tl~~--Rl~~~~~nA~~Lae~L~~ 426 (451)
+.+.. ..++..++.+.+.+.|++
T Consensus 313 ~~~~~~~~~~~~~~~~~~l~~~l~~ 337 (426)
T 1sff_A 313 KVFEQENLLQKANDLGQKLKDGLLA 337 (426)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 54432 345555666677776654
No 191
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.74 E-value=3.3e-17 Score=180.05 Aligned_cols=213 Identities=12% Similarity=0.149 Sum_probs=156.9
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC---
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~-aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~--- 283 (451)
+.....++|+.+|+++|+++++++++|+ .|+..++.+++++||+|++++++|.+.... +...|.++.+++..
T Consensus 193 ~~g~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~----l~lsGa~pv~v~~~~~~ 268 (715)
T 3n75_A 193 HSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHL----MMMSDVTPIYFRPTRNA 268 (715)
T ss_dssp TBTHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH----HHHSCCEEEEECCCBCT
T ss_pred CcHHHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHH----HHHcCCEEEEEeccccc
Confidence 4556889999999999999999999996 899999999999999999999999987753 44568887777632
Q ss_pred ------------CHHHHHHhhcCC-CeE---EEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc-------
Q 013019 284 ------------DMEGLEAALNNN-NVS---LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN------- 340 (451)
Q Consensus 284 ------------D~d~Le~ai~~~-~tk---lV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~------- 340 (451)
|+++|+++++++ +++ +|++++| |++|.+.|+++|.++|++++ +++|++++..+.
T Consensus 269 ~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~~ 345 (715)
T 3n75_A 269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEG 345 (715)
T ss_dssp TCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGTT
T ss_pred cccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccCCcccc
Confidence 799999999742 244 8999999 89999999999999998764 799999876531
Q ss_pred cccccCC--CcEE---EECCcccCCccccceeEEEEeCHHH-HHHHHHHhHhhC-CCccHHHHHHHHHh---hH--HHHH
Q 013019 341 QKALSLG--ADLV---LHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLG-GALNPNAAYLIIRG---MK--TLHL 408 (451)
Q Consensus 341 ~~pl~~G--aDiV---v~S~SK~l~G~gdv~gG~Iv~~~el-i~~lr~~~~~~G-~~ls~~~a~l~lrg---L~--tl~~ 408 (451)
..++..| +|++ ++|+||++++.. .+|++..++++ .++++....... +.++......+..+ ++ .-..
T Consensus 346 ~~al~~g~~aD~vii~~~S~hKtL~glt--qgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~ 423 (715)
T 3n75_A 346 KCGMSGGRVEGKVIYETQSTHKLLAAFS--QASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKR 423 (715)
T ss_dssp SSTTSSSCCTTCEEEEEECHHHHSSCCT--TCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHH
T ss_pred ccccccCcCCCEEEEEEecccccccCCC--CeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHH
Confidence 1233334 6866 999999999864 37787765442 234444444443 33444332222222 22 2244
Q ss_pred HHHHHHHHHHHHHHHHHcCCC
Q 013019 409 RVQQQNSTALRMAEILEAHPK 429 (451)
Q Consensus 409 Rl~~~~~nA~~Lae~L~~~p~ 429 (451)
++++..++++.+.+.|++.++
T Consensus 424 ~~~~l~~~a~~~r~~L~~i~~ 444 (715)
T 3n75_A 424 LINGSIERAIKFRKEIKRLRT 444 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 678888899999998887653
No 192
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.74 E-value=1.3e-16 Score=163.77 Aligned_cols=225 Identities=16% Similarity=0.134 Sum_probs=150.2
Q ss_pred ccCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHc---c----CCCeEEEcCCCCcchHHHHHHhhh---
Q 013019 204 YGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV---P----AGGHIVTTTDCYRKTRIFIETVLP--- 271 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all---~----~GD~VIv~~~~Y~~t~~~l~~~l~--- 271 (451)
+++|.++...+++++|+++++ .++.+++++|++|+..++.++. + +||+|++.++.|.+..........
T Consensus 80 ~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~ 159 (429)
T 1s0a_A 80 FGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDN 159 (429)
T ss_dssp CSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTT
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCch
Confidence 346677888899999999995 4677778889999999987653 2 589999999998774322111100
Q ss_pred ---------cCCcEEEEeC---------CCCHHHHHHhhcC--CCeEEEEEeCC-CCCcccccc----HHHHHHHHHhcC
Q 013019 272 ---------KMGITATVID---------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKG 326 (451)
Q Consensus 272 ---------~~Gi~v~~vd---------~~D~d~Le~ai~~--~~tklV~lesP-sNPtG~v~D----L~~IaelA~~~g 326 (451)
..++....++ ..|+++|++++++ .++++|+++.+ +||+|.+.+ +++|.++|+++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~ 239 (429)
T 1s0a_A 160 SMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREG 239 (429)
T ss_dssp TTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHT
T ss_pred hhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 0123322222 2468899998873 24788887655 799998776 999999999999
Q ss_pred CEEEEecCCCCC-C-----ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh-----HhhCCCccHHH
Q 013019 327 AIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGALNPNA 395 (451)
Q Consensus 327 ~~lVVD~tfa~~-~-----~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-----~~~G~~ls~~~ 395 (451)
+++|+|++|... . .........|++ |++|.++++ -.+.|++++++++++.++... .......++..
T Consensus 240 ~~li~De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~~G-~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~ 316 (429)
T 1s0a_A 240 ILLIADEIATGFGRTGKLFACEHAEIAPDIL--CLGKALTGG-TMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLA 316 (429)
T ss_dssp CEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTS-SSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHH
T ss_pred CEEEEeehhhCCcccchHHHhhhcCCCCCEE--EecccccCC-CccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHH
Confidence 999999998632 1 112223346766 578998862 135889999999888776521 11112345666
Q ss_pred HHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHcC---CCeE
Q 013019 396 AYLIIRGMKTLH--LRVQQQNSTALRMAEILEAH---PKVL 431 (451)
Q Consensus 396 a~l~lrgL~tl~--~Rl~~~~~nA~~Lae~L~~~---p~V~ 431 (451)
+..+...++.+. ...++..++.+.+.+.|++. |.+.
T Consensus 317 ~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~ 357 (429)
T 1s0a_A 317 CAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVA 357 (429)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGGCTTEE
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 555555555432 23456667778888888763 5554
No 193
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.74 E-value=2.8e-16 Score=162.36 Aligned_cols=218 Identities=15% Similarity=0.176 Sum_probs=149.0
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc--------CCCeEEEcCCCCcchHH-HHHHhh----
Q 013019 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRI-FIETVL---- 270 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~--------~GD~VIv~~~~Y~~t~~-~l~~~l---- 270 (451)
++..+...+|+++|+++++ .+..+++++|++|+..++.++.. +||+||+.++.|.+... .+...-
T Consensus 89 ~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~ 168 (449)
T 3a8u_X 89 QYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGN 168 (449)
T ss_dssp SCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHH
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhh
Confidence 5677888999999999985 36778888999999999987764 68999999999987432 222110
Q ss_pred -hc-----CCcEEEEeCC--------CC--------HHHHHHhhcC---CCeEEEEEeCCCCCcccccc----HHHHHHH
Q 013019 271 -PK-----MGITATVIDP--------AD--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (451)
Q Consensus 271 -~~-----~Gi~v~~vd~--------~D--------~d~Le~ai~~---~~tklV~lesPsNPtG~v~D----L~~Iael 321 (451)
.. .++....++. .| +++|++++++ .++++|++|..+|++|.+.+ +++|.++
T Consensus 169 ~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l 248 (449)
T 3a8u_X 169 RKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREI 248 (449)
T ss_dssp HTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHH
T ss_pred ccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHH
Confidence 00 1232221211 15 8999999872 24788888766678998888 9999999
Q ss_pred HHhcCCEEEEecCCCCC-Ccc-----ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH-------hhC
Q 013019 322 CHKKGAIVCIDGTFATP-LNQ-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLG 388 (451)
Q Consensus 322 A~~~g~~lVVD~tfa~~-~~~-----~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~-------~~G 388 (451)
|++||++||+|+++... ... .......|++ |++|.+++ |.++.|++++++++++.++.... ..+
T Consensus 249 ~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~ 325 (449)
T 3a8u_X 249 CNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--CIAKQVTN-GAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHG 325 (449)
T ss_dssp HHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCC
T ss_pred HHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--EEcccccC-CCCceEEEEECHHHHHHhhccCccccccccccc
Confidence 99999999999998532 111 1122345766 78899986 32457888888888888765310 111
Q ss_pred --CCccHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc
Q 013019 389 --GALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEA 426 (451)
Q Consensus 389 --~~ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L~~ 426 (451)
...++..+..+...++.+.. .+++..++...+.+.|++
T Consensus 326 ~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 367 (449)
T 3a8u_X 326 YTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHG 367 (449)
T ss_dssp CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHT
T ss_pred CCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 23466666665656655432 456667777888888876
No 194
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.74 E-value=3.5e-16 Score=162.73 Aligned_cols=230 Identities=13% Similarity=0.096 Sum_probs=152.0
Q ss_pred ccccCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc--------CCCeEEEcCCCCcchHHHHHHh--
Q 013019 202 FEYGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV-- 269 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~--------~GD~VIv~~~~Y~~t~~~l~~~-- 269 (451)
+.+.++.++...+|+++|+++.+ .+..++++||++|+..++..++. .+++||+.++.|.+........
T Consensus 86 ~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~ 165 (459)
T 4a6r_A 86 NTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGG 165 (459)
T ss_dssp CTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSC
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcC
Confidence 44556788999999999999985 46788888999999999998875 5789999999998743222111
Q ss_pred -------hhcCCcEEEEeCCC---------C--------HHHHHHhhcC---CCeEEEEEeCCCCCcccccc----HHHH
Q 013019 270 -------LPKMGITATVIDPA---------D--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLV 318 (451)
Q Consensus 270 -------l~~~Gi~v~~vd~~---------D--------~d~Le~ai~~---~~tklV~lesPsNPtG~v~D----L~~I 318 (451)
.......+.+++.. | +++|++++++ +++++|++|.++|++|.+.+ +++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l 245 (459)
T 4a6r_A 166 MKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEI 245 (459)
T ss_dssp CTTTC---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHH
T ss_pred ChhhccccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHH
Confidence 01111123334321 2 7888888862 34788888877777777776 9999
Q ss_pred HHHHHhcCCEEEEecCCCCC-Cc-----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHH---HhHhhCC
Q 013019 319 SDLCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN---LHHVLGG 389 (451)
Q Consensus 319 aelA~~~g~~lVVD~tfa~~-~~-----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~---~~~~~G~ 389 (451)
.++|++||++||+||++... .. ........|+++ ++|.++|.+ .+.|++++++++++.+.. .......
T Consensus 246 ~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t--~sK~l~gg~-~~lg~v~~~~~i~~~~~~~~~~~~~~t~ 322 (459)
T 4a6r_A 246 ERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFT--AAKGLSSGY-LPIGAVFVGKRVAEGLIAGGDFNHGFTY 322 (459)
T ss_dssp HHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEE--ECGGGGTTS-SCCEEEEECHHHHHHHHHHCTTHHHHHH
T ss_pred HHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeee--hhhhhcCCC-CCccceeeCHHHHHHhhcCCCcccCCCC
Confidence 99999999999999997632 11 111223356665 679988743 357889999999988872 2221122
Q ss_pred CccHHHHHHHHHhhHHHHH--HHHHHH-HHHHHHHHH----HHcCCCeEEEe
Q 013019 390 ALNPNAAYLIIRGMKTLHL--RVQQQN-STALRMAEI----LEAHPKVLLLF 434 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~--Rl~~~~-~nA~~Lae~----L~~~p~V~~V~ 434 (451)
..++..+..++..|+.+.. .+++.. ++...+.+. |.++|.+..+.
T Consensus 323 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 374 (459)
T 4a6r_A 323 SGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVR 374 (459)
T ss_dssp CSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3456666666666654422 234444 444444444 45667666543
No 195
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.73 E-value=1e-17 Score=167.47 Aligned_cols=204 Identities=12% Similarity=0.067 Sum_probs=140.9
Q ss_pred hHHHHHHHHHhhhCCC---cEEEe-CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----
Q 013019 211 TTVVVEEKMSALEGAE---STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (451)
Q Consensus 211 t~~~Lee~LA~l~gae---~~vv~-sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---- 282 (451)
..+++++++++++|.+ +.+++ ++|++|+..++.+++++||+|++.++.|.+.+ +...++..| ++++++.
T Consensus 50 ~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g-~~~~v~~~~~~ 126 (362)
T 2c0r_A 50 VHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASK--ALKEAKLIG-DTHVAASSEAS 126 (362)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHHS-CEEEEEECGGG
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHH--HHHHHHHhC-CeEEEeccccc
Confidence 4678999999999975 44566 46669999999999999999988776544432 113344557 6665532
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCcccc-ccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCc
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSAT 356 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v-~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~S 356 (451)
.|.++++ +++ +|++|++++|+||||.+ .|+++| +|+++|+|++++.+...-.+.. .|+++.|+|
T Consensus 127 ~~~~~~~~~~~~--i~~-~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~~~-~d~~~~s~~ 196 (362)
T 2c0r_A 127 NYMTLPKLQEIQ--LQD-NAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDLNQ-FGLVYAGAQ 196 (362)
T ss_dssp TTCSCCCGGGCC--CCT-TEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCGGG-CSEEEEETT
T ss_pred ccccCCCHHHcc--cCC-CcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCCccchhH-CcEEEEecc
Confidence 1333332 565 49999999999999996 677776 8999999999876532211221 489999999
Q ss_pred ccCCccccceeEEEEeCHHHHHHHHHH------------hHhhCCCccHHHHHHHHHhhHH------HHHHHHHHHHHHH
Q 013019 357 KFIGGHNDVLAGSISGSGKLVTQIRNL------------HHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~~eli~~lr~~------------~~~~G~~ls~~~a~l~lrgL~t------l~~Rl~~~~~nA~ 418 (451)
|+++..| .|+++++++++++++.. ......+.+....+.+..+++. +..+.++..++++
T Consensus 197 K~~g~~G---~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 273 (362)
T 2c0r_A 197 KNLGPSG---VTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKAS 273 (362)
T ss_dssp TTTCCSS---CEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred ccccCcC---cEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9997655 69999988876655421 1112234555554444444432 4556777788889
Q ss_pred HHHHHHHcCCCe
Q 013019 419 RMAEILEAHPKV 430 (451)
Q Consensus 419 ~Lae~L~~~p~V 430 (451)
.+.+.|++++++
T Consensus 274 ~l~~~L~~~~~~ 285 (362)
T 2c0r_A 274 LIYDAIDQSGGF 285 (362)
T ss_dssp HHHHHHHTSTTS
T ss_pred HHHHHHHHcCCc
Confidence 999999988643
No 196
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.73 E-value=1.1e-16 Score=165.64 Aligned_cols=216 Identities=18% Similarity=0.174 Sum_probs=141.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccC-----C----CeEEEcCCCCcchHHHHHHhhhcCCcEEE
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA-----G----GHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~-----G----D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~ 278 (451)
..+...+|+++|+++++.+++++++||++|+.+++.+++++ | |+|++. ..|+.++..... ..|..+.
T Consensus 72 ~~~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~~~~~~---~~~~~~~ 147 (467)
T 2oqx_A 72 GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFS-NYFFDTTQGHSQ---INGCTVR 147 (467)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEE-SSCCHHHHHHHH---HTTCEEE
T ss_pred cCchhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEec-ccccccchhhhh---ccCccee
Confidence 35778899999999999998999999999999999999888 9 998876 455444322211 1122211
Q ss_pred E------e--C-------CCCHHHHHHhhcC---CCeEEEEEeCCCCCc-cccc---cHHHHHHHHHhcCCEEEEecCCC
Q 013019 279 V------I--D-------PADMEGLEAALNN---NNVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 279 ~------v--d-------~~D~d~Le~ai~~---~~tklV~lesPsNPt-G~v~---DL~~IaelA~~~g~~lVVD~tfa 336 (451)
. + + ..|+++|++++++ .++++|++++|+||+ |.+. ++++|.++|++||++||+|++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~ 227 (467)
T 2oqx_A 148 NVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 227 (467)
T ss_dssp ECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTH
T ss_pred eccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhh
Confidence 1 1 1 1389999999973 248999999999998 7765 47899999999999999996532
Q ss_pred C--------------CCcccccc----CCCcEEEECCcccCCccccceeEEEEeCHH-HHHHHHHHhHh---hC-----C
Q 013019 337 T--------------PLNQKALS----LGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHV---LG-----G 389 (451)
Q Consensus 337 ~--------------~~~~~pl~----~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~e-li~~lr~~~~~---~G-----~ 389 (451)
. +.....+. .++|+++.|++|+++++ .||+++++++ +++.+...+.. .+ .
T Consensus 228 ~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (467)
T 2oqx_A 228 AENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVP---MGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYG 304 (467)
T ss_dssp HHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCS---SCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCC
T ss_pred hhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCC---CceEEEecChhHHHHHHHHHHhhhccCCccccc
Confidence 2 11111111 24788999999999765 3688888766 44444333221 11 1
Q ss_pred CccHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHcCCCeE
Q 013019 390 ALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAEILEAHPKVL 431 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl--~~Rl~~~~~nA~~Lae~L~~~p~V~ 431 (451)
.........+..+++.. ..++++..++++.+.+.|++. ++.
T Consensus 305 ~~~~~~~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~ 347 (467)
T 2oqx_A 305 GLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GVV 347 (467)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred chhhhHHHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 12222222222233322 235566678888999999886 443
No 197
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.73 E-value=5.8e-16 Score=159.75 Aligned_cols=216 Identities=16% Similarity=0.085 Sum_probs=142.8
Q ss_pred ccccCCCchhHHHHHHHHHhhh-C---C----Cc--EEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHHHHHHh
Q 013019 202 FEYGRYGNPTTVVVEEKMSALE-G---A----ES--TVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV 269 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~-g---a----e~--~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l~~~ 269 (451)
+.|+- .....+|++.+++++ + . ++ .+++++|++|+..++.+++. + |+|++++|.|......
T Consensus 66 ~~Y~~--~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~---- 138 (405)
T 3k7y_A 66 KPYLL--GNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNM---- 138 (405)
T ss_dssp CCCCT--TSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHH----
T ss_pred CCCCC--CCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHH----
Confidence 45653 233445777777654 2 1 22 34555666999999988887 8 9999999999986643
Q ss_pred hhcCCcEEEEeCC-------CCHHHHHHhhcC-CCeEEEEEeCC-CCCcccccc---HHHHHHHHHhcCCEEEEecCCCC
Q 013019 270 LPKMGITATVIDP-------ADMEGLEAALNN-NNVSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFAT 337 (451)
Q Consensus 270 l~~~Gi~v~~vd~-------~D~d~Le~ai~~-~~tklV~lesP-sNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~ 337 (451)
++..|.++..++. .|+++|++++++ .++++|++++| +||||.+++ +++|+++|++||+++|+|++|..
T Consensus 139 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~ 218 (405)
T 3k7y_A 139 IESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQG 218 (405)
T ss_dssp HHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTT
T ss_pred HHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCccc
Confidence 4556777766643 378999999864 23688888766 899999986 66788899999999999999875
Q ss_pred CCccc------cc----cC-CCcEEEECCcccCCccccceeEEEE---eCHHHHHHHHH----HhHhhCCCccHHHHHHH
Q 013019 338 PLNQK------AL----SL-GADLVLHSATKFIGGHNDVLAGSIS---GSGKLVTQIRN----LHHVLGGALNPNAAYLI 399 (451)
Q Consensus 338 ~~~~~------pl----~~-GaDiVv~S~SK~l~G~gdv~gG~Iv---~~~eli~~lr~----~~~~~G~~ls~~~a~l~ 399 (451)
..... ++ .. ..-+++.|+||.++.+| .+.||++ .++++++++.. .......+.+.+.+.++
T Consensus 219 l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G-lRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~ 297 (405)
T 3k7y_A 219 FGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYG-ERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRIL 297 (405)
T ss_dssp TSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTT-TTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHH
T ss_pred ccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCcc-ccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHH
Confidence 43210 11 11 23588999999998777 4677764 36777665543 22222223344443333
Q ss_pred HHhh----------HHHHHHHHHHHHHHHHHHHHHH
Q 013019 400 IRGM----------KTLHLRVQQQNSTALRMAEILE 425 (451)
Q Consensus 400 lrgL----------~tl~~Rl~~~~~nA~~Lae~L~ 425 (451)
...+ +.+....++..++...+.+.|+
T Consensus 298 ~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~ 333 (405)
T 3k7y_A 298 CQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLE 333 (405)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 2233334556778888899998
No 198
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.73 E-value=3.3e-17 Score=175.27 Aligned_cols=150 Identities=16% Similarity=0.277 Sum_probs=113.6
Q ss_pred cEEEeCCHH-HHHHHHHHH-----HccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-------CCHHHHHHhhc
Q 013019 227 STVIMASGM-SASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALN 293 (451)
Q Consensus 227 ~~vv~sSG~-aAi~~al~a-----ll~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-------~D~d~Le~ai~ 293 (451)
+.+++++|. +++..++.+ ++++||+|++++|.|.+..... .+...|+++..++. .|+++|+++++
T Consensus 166 ~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~ 243 (546)
T 2zy4_A 166 VNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIP--ELAQYALEEVAINADPSLNWQYPDSELDKLKD 243 (546)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHH--HSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS
T ss_pred ceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHH--HHcCCCcEEEEEecCcccCCCCCHHHHHHhhC
Confidence 455555555 899988887 4789999999999998865432 13445677666642 47899998886
Q ss_pred CCCeEEEEEeCCCCCcccccc---HHHHHHHH--HhcCCEEEEecCCCCCCc--ccccc--CCCcEEEECCcccCCcccc
Q 013019 294 NNNVSLFFTESPTNPFLRCVD---VKLVSDLC--HKKGAIVCIDGTFATPLN--QKALS--LGADLVLHSATKFIGGHND 364 (451)
Q Consensus 294 ~~~tklV~lesPsNPtG~v~D---L~~IaelA--~~~g~~lVVD~tfa~~~~--~~pl~--~GaDiVv~S~SK~l~G~gd 364 (451)
+ ++++|++++|+||||.+++ +++|.++| +++|++||+|++|+.... ..... .+.++++.|+||.++.+|
T Consensus 244 ~-~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~G- 321 (546)
T 2zy4_A 244 P-AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATG- 321 (546)
T ss_dssp T-TEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGG-
T ss_pred C-CCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCC-
Confidence 6 4999999999999999986 56788888 789999999999875432 11111 246799999999998776
Q ss_pred ceeEEEEeCHH-HHHHH
Q 013019 365 VLAGSISGSGK-LVTQI 380 (451)
Q Consensus 365 v~gG~Iv~~~e-li~~l 380 (451)
.+.|+++++++ +++++
T Consensus 322 lRiG~~~~~~~~l~~~l 338 (546)
T 2zy4_A 322 WRLGVVAAHQQNVFDLA 338 (546)
T ss_dssp GCEEEEEEESSCHHHHH
T ss_pred cceEEEEECCHHHHHHH
Confidence 56889888764 77766
No 199
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.73 E-value=6.9e-18 Score=167.97 Aligned_cols=204 Identities=10% Similarity=0.081 Sum_probs=140.7
Q ss_pred hHHHHHHHHHhhhCCC--cEE-EeCCH-HHHHHHHHHHHccC---CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-
Q 013019 211 TTVVVEEKMSALEGAE--STV-IMASG-MSASTVMLLALVPA---GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (451)
Q Consensus 211 t~~~Lee~LA~l~gae--~~v-v~sSG-~aAi~~al~all~~---GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~- 282 (451)
..+++++++++++|.+ +.+ +++++ ++|+.+++.+++.+ ||+|+++.+.|.. . ..+...| ++.+++.
T Consensus 49 ~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~----~-~~~~~~g-~~~~v~~~ 122 (360)
T 1w23_A 49 VHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKA----L-KEAKLLG-ETHIAAST 122 (360)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHH----H-HHHHTTS-EEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHH----H-HHHHHhC-CeEEeecc
Confidence 4678999999999975 344 45555 79999999998865 5667766544432 1 2245568 7776642
Q ss_pred -----CCHHHHHH-hhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCc
Q 013019 283 -----ADMEGLEA-ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSAT 356 (451)
Q Consensus 283 -----~D~d~Le~-ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~S 356 (451)
.|+++|++ ++++ ++++|++++|+||||.+.+ + +++++|+++|+|++++.+.....+.. .|+++.|+|
T Consensus 123 ~~~~~~d~~~l~~~~i~~-~~k~v~~~~~~nptG~~~~--~---i~~~~~~~li~D~a~~~~~~~~~~~~-~di~~~s~s 195 (360)
T 1w23_A 123 KANSYQSIPDFSEFQLNE-NDAYLHITSNNTIYGTQYQ--N---FPEINHAPLIADMSSDILSRPLKVNQ-FGMIYAGAQ 195 (360)
T ss_dssp GGGTSCSCCCGGGCCCCT-TEEEEEEESEETTTTEECS--S---CCCCCSSCEEEECTTTTTSSCCCGGG-CSEEEEETT
T ss_pred cccCcCCccchHhhccCC-CCCEEEEeCCCCCcceecc--c---ccccCCceEEEechhhcCCCCcCccc-CCEEEEEcc
Confidence 36778888 8876 4999999999999999977 3 33389999999999876532212221 389999999
Q ss_pred ccCCccccceeEEEEeCHHHHHHHHHHhH------------hhCCCccHHHHHHHHHhhHH------HHHHHHHHHHHHH
Q 013019 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH------------VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (451)
Q Consensus 357 K~l~G~gdv~gG~Iv~~~eli~~lr~~~~------------~~G~~ls~~~a~l~lrgL~t------l~~Rl~~~~~nA~ 418 (451)
|.+++.| .|+++++++++++++.... ....+.+....+.+..+++. +..+.++..++++
T Consensus 196 K~~~~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 272 (360)
T 1w23_A 196 KNLGPSG---VTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAK 272 (360)
T ss_dssp TTTSCTT---CEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccCCCC---cEEEEEcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 9998665 6888888887765543210 11123344444444444433 4455777788899
Q ss_pred HHHHHHHcCCCe
Q 013019 419 RMAEILEAHPKV 430 (451)
Q Consensus 419 ~Lae~L~~~p~V 430 (451)
.+.+.|++.+++
T Consensus 273 ~l~~~L~~~~~~ 284 (360)
T 1w23_A 273 IIYDTIDESNGF 284 (360)
T ss_dssp HHHHHHHTTTTS
T ss_pred HHHHHHHHccCc
Confidence 999999988754
No 200
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.73 E-value=1.3e-16 Score=164.89 Aligned_cols=214 Identities=15% Similarity=0.178 Sum_probs=145.8
Q ss_pred hhHHHHHHHHHhhhCCCcE--EEeCCHHHHHHHHHHH-HccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC---
Q 013019 210 PTTVVVEEKMSALEGAEST--VIMASGMSASTVMLLA-LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae~~--vv~sSG~aAi~~al~a-ll~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~--- 283 (451)
+...++++++++++|.+.. +++++|+++..+++.+ .+++||+|+++++.|..+...+...++..|+++.+++..
T Consensus 108 ~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~ 187 (438)
T 1wyu_A 108 QATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGR 187 (438)
T ss_dssp HHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTB
T ss_pred HHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCcCCc
Confidence 3467899999999998643 4555555444444433 357899999999999988777766667789999888742
Q ss_pred -CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC-CCCCCccccccCCCcEEEECCcc----
Q 013019 284 -DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATK---- 357 (451)
Q Consensus 284 -D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t-fa~~~~~~pl~~GaDiVv~S~SK---- 357 (451)
|+++ +++ +|++|++++| ||+|.+.|+++|.++|+++|+++++|.. .+.+....+..+|+|+++.|..|
T Consensus 188 ~d~~~----i~~-~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk~~~~ 261 (438)
T 1wyu_A 188 TPLPE----VGE-EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLP 261 (438)
T ss_dssp CCCCC----CCT-TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCC
T ss_pred cCHHH----hCC-CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCCccCCCCEEEECCcccCCC
Confidence 2333 665 4999999999 9999999999999999999999997743 22222233456789999999444
Q ss_pred -cCCccccceeEEEEeCHHHHHHHHHH-------------------------hHhhC-CCc---cHHH---HH--HHHHh
Q 013019 358 -FIGGHNDVLAGSISGSGKLVTQIRNL-------------------------HHVLG-GAL---NPNA---AY--LIIRG 402 (451)
Q Consensus 358 -~l~G~gdv~gG~Iv~~~eli~~lr~~-------------------------~~~~G-~~l---s~~~---a~--l~lrg 402 (451)
+++|++ +|++++++++++++... +...+ ... .... ++ +...+
T Consensus 262 ~~~~Gp~---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~ 338 (438)
T 1wyu_A 262 MGFGGPH---FGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALG 338 (438)
T ss_dssp CGGGCSC---CEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHH
T ss_pred ccCCCCC---eeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhC
Confidence 344553 79999998876654210 11111 111 2222 22 21122
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 013019 403 MKTLHLRVQQQNSTALRMAEILEAHPKVLL 432 (451)
Q Consensus 403 L~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~ 432 (451)
-+.+....++..++++.+.+.|++.|+++.
T Consensus 339 ~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~ 368 (438)
T 1wyu_A 339 PEGLREVALKSVEMAHKLHALLLEVPGVRP 368 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 233555567777889999999999888754
No 201
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.72 E-value=6.3e-16 Score=160.85 Aligned_cols=229 Identities=10% Similarity=0.065 Sum_probs=151.1
Q ss_pred cccCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc--------CCCeEEEcCCCCcchHHHHHHh---
Q 013019 203 EYGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV--- 269 (451)
Q Consensus 203 ~Y~R~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~--------~GD~VIv~~~~Y~~t~~~l~~~--- 269 (451)
.+.++.++...+|+++|+++.+ .+.+++++||++|+..++.+++. .+++||+.++.|.+........
T Consensus 88 ~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~ 167 (460)
T 3gju_A 88 AYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGL 167 (460)
T ss_dssp CCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCC
T ss_pred cccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCC
Confidence 3446678889999999999874 36788888999999999988874 4689999999997743222111
Q ss_pred ------hhcCCcEEEEeCC------CC------------HHHHHHhhcC---CCeEEEEEeCCCCCcccccc----HHHH
Q 013019 270 ------LPKMGITATVIDP------AD------------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLV 318 (451)
Q Consensus 270 ------l~~~Gi~v~~vd~------~D------------~d~Le~ai~~---~~tklV~lesPsNPtG~v~D----L~~I 318 (451)
+......+..++. .| +++|++++++ +++++|++|.++|++|.+.+ +++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l 247 (460)
T 3gju_A 168 DLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKI 247 (460)
T ss_dssp GGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHH
T ss_pred cccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHH
Confidence 1111122333331 12 6889988862 34899999988888887665 9999
Q ss_pred HHHHHhcCCEEEEecCCCCC-Cc-----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH-------hH
Q 013019 319 SDLCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HH 385 (451)
Q Consensus 319 aelA~~~g~~lVVD~tfa~~-~~-----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~-------~~ 385 (451)
.++|++||++||+||+|... .. ........|++ +++|.+++. ..+.|++++++++++.+... ..
T Consensus 248 ~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~--t~sK~l~gG-~~~lg~v~~~~~i~~~~~~~~~~~~~~~~ 324 (460)
T 3gju_A 248 QAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLI--TIAKGLTSA-YAPLSGVIVADRVWQVLVQGSDKLGSLGH 324 (460)
T ss_dssp HHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE--EECGGGTTT-SSCCEEEEEEHHHHHHHHHHHHHHCSCSC
T ss_pred HHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee--eeehhhcCC-CCCeEEEEECHHHHHHHhccccccccccc
Confidence 99999999999999997632 11 11112234665 477999873 13578899999999888642 11
Q ss_pred hhCCCccHHHHHHHHHhhHHHHH--HHHHHHHHHHHHH----HHHHcCCCeEEEe
Q 013019 386 VLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMA----EILEAHPKVLLLF 434 (451)
Q Consensus 386 ~~G~~ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~~La----e~L~~~p~V~~V~ 434 (451)
......++..+..++..|+.+.. .+++..++.+.+. +.|.++|.+..+.
T Consensus 325 ~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 379 (460)
T 3gju_A 325 GWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVR 379 (460)
T ss_dssp CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe
Confidence 11234567766666666654322 2444444444444 4455677766553
No 202
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.72 E-value=1.5e-16 Score=166.19 Aligned_cols=229 Identities=12% Similarity=0.124 Sum_probs=155.9
Q ss_pred ccCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------CCC-eEEEcCCCCcchHHHHHHh----
Q 013019 204 YGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AGG-HIVTTTDCYRKTRIFIETV---- 269 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~-------~GD-~VIv~~~~Y~~t~~~l~~~---- 269 (451)
++++.++...+|+++|+++.+ .+.+++++||++|+..++..++. +|+ +||+.++.|.+........
T Consensus 112 ~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~ 191 (457)
T 3tfu_A 112 FGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPH 191 (457)
T ss_dssp SSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC
T ss_pred ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCc
Confidence 467788999999999999995 46788889999999999988765 554 8898888887632211111
Q ss_pred ------hhcCCcEEEEeCC-------CCHHHHHHhhcC--CCeEEEEEeC-CCCCcccccc----HHHHHHHHHhcCCEE
Q 013019 270 ------LPKMGITATVIDP-------ADMEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAIV 329 (451)
Q Consensus 270 ------l~~~Gi~v~~vd~-------~D~d~Le~ai~~--~~tklV~les-PsNPtG~v~D----L~~IaelA~~~g~~l 329 (451)
.......+.+++. .|+++|++++++ +++++|++|. ++|++|.+.+ +++|.++|++||++|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gill 271 (457)
T 3tfu_A 192 GGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLL 271 (457)
T ss_dssp ----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEE
T ss_pred ccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 1111112233332 368899999872 2489999999 8999998875 999999999999999
Q ss_pred EEecCCCCC------CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH-----hHhhCCCccHHHHHH
Q 013019 330 CIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGGALNPNAAYL 398 (451)
Q Consensus 330 VVD~tfa~~------~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~-----~~~~G~~ls~~~a~l 398 (451)
|+||++... ..........|++ +++|.++|. ..++|++++++++++.+... ........++..+..
T Consensus 272 I~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l~gG-~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aa 348 (457)
T 3tfu_A 272 IFDEIATGFGRTGALFAADHAGVSPDIM--CVGKALTGG-YLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAV 348 (457)
T ss_dssp EEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTT-SSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHH
T ss_pred EEEcCccCCccccchhHhHhcCCCceEE--EEChhhhCC-CcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHH
Confidence 999997532 1112222345766 788998873 23588999999998888632 111123456777666
Q ss_pred HHHhhHHHHH--HHHHHHHHHHHHHHHHHc---CCCeEEEec
Q 013019 399 IIRGMKTLHL--RVQQQNSTALRMAEILEA---HPKVLLLFI 435 (451)
Q Consensus 399 ~lrgL~tl~~--Rl~~~~~nA~~Lae~L~~---~p~V~~V~y 435 (451)
++..|+.+.. ..++..++.+.+.+.|++ +|.|..+..
T Consensus 349 a~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~ 390 (457)
T 3tfu_A 349 SVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDVRV 390 (457)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEEEE
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeeeec
Confidence 6666665432 345566667777777764 466665543
No 203
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.72 E-value=3.2e-16 Score=160.86 Aligned_cols=218 Identities=13% Similarity=0.043 Sum_probs=145.7
Q ss_pred cCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHcc-CCCeEEEcCCCCcchHHHHHHh----------h
Q 013019 205 GRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETV----------L 270 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all~-~GD~VIv~~~~Y~~t~~~l~~~----------l 270 (451)
.+|.++...+|+++|++++|. ++.+++++|++|+..++.++.. +||+||+.++.|.+........ .
T Consensus 81 ~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~ 160 (419)
T 2eo5_A 81 NDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIV 160 (419)
T ss_dssp SCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSS
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCcccccccc
Confidence 467788899999999999985 3566677788999999887654 4999999999997643322111 0
Q ss_pred hcCCcEEEEeCCC---------------------CHHHHH-HhhcC----CCeEEEEEeCCCCCcccccc----HHHHHH
Q 013019 271 PKMGITATVIDPA---------------------DMEGLE-AALNN----NNVSLFFTESPTNPFLRCVD----VKLVSD 320 (451)
Q Consensus 271 ~~~Gi~v~~vd~~---------------------D~d~Le-~ai~~----~~tklV~lesPsNPtG~v~D----L~~Iae 320 (451)
......+..++.. |+++|+ +++++ +++++|+++..+||+|.+.+ +++|.+
T Consensus 161 ~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~ 240 (419)
T 2eo5_A 161 GPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQK 240 (419)
T ss_dssp CCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHH
T ss_pred CCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHH
Confidence 0111234444322 367898 88863 24777777654567897665 999999
Q ss_pred HHHhcCCEEEEecCCCCC-Cc-----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHH
Q 013019 321 LCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 394 (451)
Q Consensus 321 lA~~~g~~lVVD~tfa~~-~~-----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~ 394 (451)
+|++||++||+||+|... .. ........|++ |++|.+++ |-.+.|+++++++++ .+ ..........++.
T Consensus 241 l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~-G~~riG~~~~~~~~~-~~-~~~~~~t~~~n~~ 315 (419)
T 2eo5_A 241 LAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI--TLAKALGG-GIMPIGATIFRKDLD-FK-PGMHSNTFGGNAL 315 (419)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TTSCCEEEEEEGGGC-CC-------CCCCCHH
T ss_pred HHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE--EecccccC-CccceEEEEEchHhh-cC-CcccCCCCCCCHH
Confidence 999999999999998632 11 11122345665 68999986 314678888888877 65 2122222344676
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 395 AAYLIIRGMKTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 395 ~a~l~lrgL~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
.+..+...++.+....++..++.+.+.+.|++.
T Consensus 316 ~~~aa~aal~~~~~~~~~~~~~~~~l~~~L~~~ 348 (419)
T 2eo5_A 316 ACAIGSKVIDIVKDLLPHVNEIGKIFAEELQGL 348 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 666666666655445566777888888888775
No 204
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.72 E-value=5.3e-16 Score=159.23 Aligned_cols=225 Identities=12% Similarity=0.108 Sum_probs=144.4
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc--------CCCeEEEcCCCCcchHHHHHHhhhc---
Q 013019 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETVLPK--- 272 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~--------~GD~VIv~~~~Y~~t~~~l~~~l~~--- 272 (451)
++.++...+|+++|+++++. ++.+++++|++|+..++.+++. .||+||+.++.|.+........-..
T Consensus 68 ~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 147 (430)
T 3i4j_A 68 QFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGAR 147 (430)
T ss_dssp TCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-----------------
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCcccc
Confidence 57788899999999999964 6777888899999999988763 4789999999998743221111000
Q ss_pred ------CCc--EEEEeCCC--------CHHHHHHhhcC---CCeEEEEEeCCCC-Ccccccc----HHHHHHHHHhcCCE
Q 013019 273 ------MGI--TATVIDPA--------DMEGLEAALNN---NNVSLFFTESPTN-PFLRCVD----VKLVSDLCHKKGAI 328 (451)
Q Consensus 273 ------~Gi--~v~~vd~~--------D~d~Le~ai~~---~~tklV~lesPsN-PtG~v~D----L~~IaelA~~~g~~ 328 (451)
... .+..++.. |+++|++++++ +++++|++|.++| ++|...+ +++|.++|++||++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 227 (430)
T 3i4j_A 148 RELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGII 227 (430)
T ss_dssp --------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCE
T ss_pred ccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 000 22233332 44888888862 3478888888788 8888776 99999999999999
Q ss_pred EEEecCCCCC-Cc-----cccc-cCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHH----hHhhCCCccHHHHH
Q 013019 329 VCIDGTFATP-LN-----QKAL-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HHVLGGALNPNAAY 397 (451)
Q Consensus 329 lVVD~tfa~~-~~-----~~pl-~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~----~~~~G~~ls~~~a~ 397 (451)
||+||+|... .. .... ....|++ +++|.+++ |-.+.|++++++++++.++.. ........++..+.
T Consensus 228 li~DEv~~~~~~~g~~~~~~~~~~~~~di~--t~sK~l~~-G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~a 304 (430)
T 3i4j_A 228 FIADEVMSGMGRCGSPLALSRWSGVTPDIA--VLGKGLAA-GYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVA 304 (430)
T ss_dssp EEEECTTTTTTTTSSSSGGGGTTTCCCSEE--EECGGGTT-TSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHH
T ss_pred EEEechhhCCCcccchhhhhhhcCCCCcEE--EEcccccC-CccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHH
Confidence 9999997642 11 1111 2224665 47899986 324678999999999988763 22222345677666
Q ss_pred HHHHhhHHHH--HHHHHHHHHHHHHHHHH----HcCCCeEEE
Q 013019 398 LIIRGMKTLH--LRVQQQNSTALRMAEIL----EAHPKVLLL 433 (451)
Q Consensus 398 l~lrgL~tl~--~Rl~~~~~nA~~Lae~L----~~~p~V~~V 433 (451)
.++..|+.+. ..+++..++.+.+.+.| .++|.+..+
T Consensus 305 aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 346 (430)
T 3i4j_A 305 AGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQV 346 (430)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 6555555432 22444445555554444 356766554
No 205
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.72 E-value=1.7e-16 Score=166.92 Aligned_cols=226 Identities=12% Similarity=0.166 Sum_probs=152.2
Q ss_pred ccccCCCchhHHHHHH----HHHhhhCC---CcEEEeCCHHHHHHHHHHHH----c---------cC------CC-eEEE
Q 013019 202 FEYGRYGNPTTVVVEE----KMSALEGA---ESTVIMASGMSASTVMLLAL----V---------PA------GG-HIVT 254 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee----~LA~l~ga---e~~vv~sSG~aAi~~al~al----l---------~~------GD-~VIv 254 (451)
+.|+. .|....+|+ +|++++|. +..+++++|++|+..++.++ + .+ || +|++
T Consensus 130 ~~~~~--~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~ 207 (497)
T 2qma_A 130 DSWDQ--ASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVC 207 (497)
T ss_dssp TCGGG--CHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEE
T ss_pred cchhh--ChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEE
Confidence 44543 355555554 49999986 45777788889999888773 3 13 46 7999
Q ss_pred cCCCCcchHHHHHHhhhcCCc-EEEEeCCC-----CHHHHHHhhcCC---Ce--EEEEEeCCCCCccccccHHHHHHHHH
Q 013019 255 TTDCYRKTRIFIETVLPKMGI-TATVIDPA-----DMEGLEAALNNN---NV--SLFFTESPTNPFLRCVDVKLVSDLCH 323 (451)
Q Consensus 255 ~~~~Y~~t~~~l~~~l~~~Gi-~v~~vd~~-----D~d~Le~ai~~~---~t--klV~lesPsNPtG~v~DL~~IaelA~ 323 (451)
+...|.+....+.. +. .|. ++..++.+ |+++|+++|+++ .+ .+|+++.++|++|.+.|+++|.++|+
T Consensus 208 s~~~h~s~~~~~~~-~g-~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~ 285 (497)
T 2qma_A 208 SKKSHFTVQKSASW-MG-LGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAV 285 (497)
T ss_dssp ETTSCTHHHHHHHH-TT-SCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred CCCchHHHHHHHHH-cC-CCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHH
Confidence 98899876644322 11 133 56666643 789999988642 13 48888999999999999999999999
Q ss_pred hcCCEEEEecCCCCCCcccc----c-cC-CCcEEEECCcccCCccccceeEEEEeC-HHHHHHHHHHhHhhC--------
Q 013019 324 KKGAIVCIDGTFATPLNQKA----L-SL-GADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-------- 388 (451)
Q Consensus 324 ~~g~~lVVD~tfa~~~~~~p----l-~~-GaDiVv~S~SK~l~G~gdv~gG~Iv~~-~eli~~lr~~~~~~G-------- 388 (451)
++|+++++|++|+.+....+ + .. ++|+++.|+||+++++. ..|+++.+ +.+++.+.....++.
T Consensus 286 ~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~--~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~ 363 (497)
T 2qma_A 286 KHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTI--SCGALLVNDKSNFKFLLHHADYLNREHDELPN 363 (497)
T ss_dssp HHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCS--SCEEEEESCGGGGGGGCC--------------
T ss_pred HcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCc--ceEEEEEeCHHHHHHhcCCchhcCCccccCCC
Confidence 99999999999876532211 1 12 67999999999998874 35666654 443333221010110
Q ss_pred ---C------CccHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Q 013019 389 ---G------ALNPNAAYLIIRG--MKTLHLRVQQQNSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 389 ---~------~ls~~~a~l~lrg--L~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V 433 (451)
. .......|.+++. .+.+..++++..++++.+.+.|++.|+++.+
T Consensus 364 ~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 419 (497)
T 2qma_A 364 LVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELL 419 (497)
T ss_dssp ------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEC
T ss_pred ccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence 0 0123334555543 3556677888889999999999998887543
No 206
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.72 E-value=2.4e-16 Score=165.55 Aligned_cols=226 Identities=15% Similarity=0.185 Sum_probs=159.9
Q ss_pred CccccCCCchhHHHHHHHH----HhhhCCC------------cEEEeCCHHHHHHHHHHHHcc-----------------
Q 013019 201 SFEYGRYGNPTTVVVEEKM----SALEGAE------------STVIMASGMSASTVMLLALVP----------------- 247 (451)
Q Consensus 201 ~~~Y~R~~npt~~~Lee~L----A~l~gae------------~~vv~sSG~aAi~~al~all~----------------- 247 (451)
.+.|. ..|...+||+.+ ++++|.+ ..+++++|++|+..++.+...
T Consensus 107 ~~~~~--~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~ 184 (481)
T 4e1o_A 107 GFTWA--SSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESS 184 (481)
T ss_dssp CSSTT--TCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHH
T ss_pred cCCcC--CCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCccccccc
Confidence 34454 457777777655 6667753 468888999999888876542
Q ss_pred --CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-----CCHHHHHHhhcCC-----CeEEEEEeCCCCCccccccH
Q 013019 248 --AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDV 315 (451)
Q Consensus 248 --~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-----~D~d~Le~ai~~~-----~tklV~lesPsNPtG~v~DL 315 (451)
+++.|+++...|.+..... ...|++++.++. .|+++|+++|+++ .+.+|++..++|++|.+.|+
T Consensus 185 ~~~~~~v~~s~~~H~s~~~~~----~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l 260 (481)
T 4e1o_A 185 LNARLVAYASDQAHSSVEKAG----LISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCL 260 (481)
T ss_dssp HHTTEEEEEETTSCHHHHHHH----HHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCH
T ss_pred ccCCeEEEEcCcchHHHHHHH----HhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCH
Confidence 5678999999998866543 335788888874 3899999999753 16788889999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCCCCc----cccccCC---CcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh-Hhh
Q 013019 316 KLVSDLCHKKGAIVCIDGTFATPLN----QKALSLG---ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVL 387 (451)
Q Consensus 316 ~~IaelA~~~g~~lVVD~tfa~~~~----~~pl~~G---aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-~~~ 387 (451)
++|+++|++||+++++|++|+.... .+.+..| +|.++.++||+++++.+ .+++++.+++++.+..... .++
T Consensus 261 ~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g-~g~l~~~~~~~l~~~~~~~~~yl 339 (481)
T 4e1o_A 261 SELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFD-CTGFWVKDKYKLQQTFSVNPIYL 339 (481)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS-CEEEEESBHHHHHTTTCCCCGGG
T ss_pred HHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCc-eEEEEEeCHHHHHHHhcCCchhc
Confidence 9999999999999999999876422 1222224 59999999999998753 2344444455443211100 011
Q ss_pred ------------------CCCccHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Q 013019 388 ------------------GGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 388 ------------------G~~ls~~~a~l~lr--gL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V 433 (451)
+........|.+++ +.+.+..++++..++++.+++.|++.|+++.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 405 (481)
T 4e1o_A 340 RHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIP 405 (481)
T ss_dssp CCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECC
T ss_pred cCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 11123455565554 55677888899999999999999999887643
No 207
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.71 E-value=2e-16 Score=163.88 Aligned_cols=226 Identities=15% Similarity=0.115 Sum_probs=144.2
Q ss_pred cCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc----CC----CeEEEcCCCCcchHHHHHHh-----
Q 013019 205 GRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP----AG----GHIVTTTDCYRKTRIFIETV----- 269 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~----~G----D~VIv~~~~Y~~t~~~l~~~----- 269 (451)
.++.++...+|+++|+++.+ .+.+++++||++|+..++..++. +| |+||+.++.|.+........
T Consensus 82 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 161 (448)
T 3dod_A 82 LGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIEL 161 (448)
T ss_dssp SSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC------------------
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCcc
Confidence 45677889999999999985 46788889999999999988776 45 99999999997643211100
Q ss_pred ----hhcCCcEEEEeCCC----------------CHHHHHHhhc--CCCeEEEEEeCCC-CCcccccc----HHHHHHHH
Q 013019 270 ----LPKMGITATVIDPA----------------DMEGLEAALN--NNNVSLFFTESPT-NPFLRCVD----VKLVSDLC 322 (451)
Q Consensus 270 ----l~~~Gi~v~~vd~~----------------D~d~Le~ai~--~~~tklV~lesPs-NPtG~v~D----L~~IaelA 322 (451)
+......+..++.. |+++|+++++ ++++++|++|.++ |++|.+.+ +++|.++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~ 241 (448)
T 3dod_A 162 FHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELC 241 (448)
T ss_dssp -----------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHH
T ss_pred ccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHH
Confidence 00001122333332 3788999886 2348899999888 88887765 99999999
Q ss_pred HhcCCEEEEecCCCCC-C-----ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHH-------HhHhhCC
Q 013019 323 HKKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-------LHHVLGG 389 (451)
Q Consensus 323 ~~~g~~lVVD~tfa~~-~-----~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~-------~~~~~G~ 389 (451)
++||++||+||++... . .........|++ +++|.+++ |.+..|++++++++++.++. .......
T Consensus 242 ~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~--t~sK~l~~-G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~ 318 (448)
T 3dod_A 242 TTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLM--AAGKGITG-GYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSY 318 (448)
T ss_dssp HHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTT
T ss_pred HHhCCEEEEeccccCCCcccchhhhhhcCCCCCEE--EecccccC-CcCceEEEEECHHHHHHhhhccccCCcccccCCC
Confidence 9999999999997632 1 112122234665 57899976 42467899999998887764 2221223
Q ss_pred CccHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH---cCCCeEEE
Q 013019 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILE---AHPKVLLL 433 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L~---~~p~V~~V 433 (451)
..++..+..++..|+.+.. .+++..++.+.+.+.|+ ++|.+..+
T Consensus 319 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 367 (448)
T 3dod_A 319 TGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDI 367 (448)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred CcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 4567776666666664432 24555555555555554 56666544
No 208
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.71 E-value=2.6e-16 Score=162.96 Aligned_cols=215 Identities=19% Similarity=0.212 Sum_probs=141.1
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHH---HccCCCeEEEcCCCCcchHHHHHHhh------h-cCCc
Q 013019 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLA---LVPAGGHIVTTTDCYRKTRIFIETVL------P-KMGI 275 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~-gae~~vv~sSG~aAi~~al~a---ll~~GD~VIv~~~~Y~~t~~~l~~~l------~-~~Gi 275 (451)
+.++...+|.++++++. +.+.+++++||++|+..++.+ +.+ +++||+.++.|.+......... . ..|+
T Consensus 94 ~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~ 172 (453)
T 2cy8_A 94 ASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGV 172 (453)
T ss_dssp SSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHHHHC-CCEEEEECC-------------------------
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCC
Confidence 56778888888988887 567788889999999999887 544 5788888898876433211100 0 1233
Q ss_pred ------EEEEeCCCCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCCCcc--
Q 013019 276 ------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQ-- 341 (451)
Q Consensus 276 ------~v~~vd~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~~~~-- 341 (451)
.+..++..|+++|++++++ .++++|++|..+|++|.+.+ +++|.++|++||++||+||++......
T Consensus 173 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~ 252 (453)
T 2cy8_A 173 LPETTANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGFRVGNH 252 (453)
T ss_dssp ---CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTCTT
T ss_pred CccccCceeecCCCCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccCch
Confidence 2444555789999999873 24888888766678998887 999999999999999999998732111
Q ss_pred ---ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHH---H--hHhhCCCccHHHHHHHHHhhHH-H-HHHHH
Q 013019 342 ---KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN---L--HHVLGGALNPNAAYLIIRGMKT-L-HLRVQ 411 (451)
Q Consensus 342 ---~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~---~--~~~~G~~ls~~~a~l~lrgL~t-l-~~Rl~ 411 (451)
.......|++ |++|.+++ | ..+|++++++++++.++. . ........++..+..++..|+. + ....+
T Consensus 253 ~~~~~~~~~~di~--s~sK~l~~-G-~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~~~~~~~ 328 (453)
T 2cy8_A 253 GMQALLDVQPDLT--CLAKASAG-G-LPGGILGGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTILEDDVCA 328 (453)
T ss_dssp HHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHHHTTHHH
T ss_pred hhhHHhCCCCcEE--EEChhhhC-C-cceEEEechHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHhhhhHHH
Confidence 1122345765 78899986 3 468999999988877654 1 1111224567777666666665 4 33455
Q ss_pred HHHHHHHHHHHHHHc
Q 013019 412 QQNSTALRMAEILEA 426 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~ 426 (451)
+..++.+.+.+.|++
T Consensus 329 ~~~~~~~~l~~~L~~ 343 (453)
T 2cy8_A 329 KINDLGQFAREAMNH 343 (453)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 666677777776654
No 209
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.71 E-value=2.1e-16 Score=162.35 Aligned_cols=217 Identities=18% Similarity=0.217 Sum_probs=147.6
Q ss_pred CCCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHHHHHHhhh----------c
Q 013019 206 RYGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLP----------K 272 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~g-ae~~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l~~~l~----------~ 272 (451)
.|.++...+|+++|+++++ .+..++++||++|+..++..+.. ++++||+.++.|.+.......... .
T Consensus 91 ~~~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~ 170 (434)
T 3l44_A 91 GTPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDS 170 (434)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSS
T ss_pred CCCCHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCc
Confidence 3578888999999999984 57788888999999999987654 678999999998763311100000 0
Q ss_pred CCc------EEEEeCCCCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCCCc
Q 013019 273 MGI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN 340 (451)
Q Consensus 273 ~Gi------~v~~vd~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~~~ 340 (451)
.++ .+..++..|+++|++++++ .++++|++|.++|++|.+.+ +++|.++|++||++||+||++.....
T Consensus 171 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~ 250 (434)
T 3l44_A 171 AGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRF 250 (434)
T ss_dssp TTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTS
T ss_pred CCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceec
Confidence 011 3445566689999998872 24888998877777888877 99999999999999999999864211
Q ss_pred -----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh---HhhCCCccHHHHHHHHHhhHHH--HHHH
Q 013019 341 -----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPNAAYLIIRGMKTL--HLRV 410 (451)
Q Consensus 341 -----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~---~~~G~~ls~~~a~l~lrgL~tl--~~Rl 410 (451)
........|++ +++|.+++ | .+.|++++++++++.+.... .......++..+..++..++.+ ...+
T Consensus 251 g~~~~~~~~~~~~di~--t~sK~~~~-G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~ 326 (434)
T 3l44_A 251 MYGGAQDLLGVTPDLT--ALGKVIGG-G-LPIGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLY 326 (434)
T ss_dssp SSSCHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHH
T ss_pred cccHHHHHcCCCCCee--ehhhhhcC-C-cCeeeEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHH
Confidence 11122334654 67899974 4 57888899999888766421 1112345666666555555543 2234
Q ss_pred HHHHHHHHHHHHHHHc
Q 013019 411 QQQNSTALRMAEILEA 426 (451)
Q Consensus 411 ~~~~~nA~~Lae~L~~ 426 (451)
++..++.+.+.+.|++
T Consensus 327 ~~~~~~~~~l~~~L~~ 342 (434)
T 3l44_A 327 EKLDELGATLEKGILE 342 (434)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555666666666654
No 210
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.71 E-value=1e-16 Score=164.89 Aligned_cols=217 Identities=15% Similarity=0.180 Sum_probs=150.7
Q ss_pred CCCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHH--ccCCCeEEEcCCCCcchHHHHHHhh----------hc
Q 013019 206 RYGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL----------PK 272 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~-gae~~vv~sSG~aAi~~al~al--l~~GD~VIv~~~~Y~~t~~~l~~~l----------~~ 272 (451)
.+.++...+|+++|+++. +.+..++++||++|+..++... +..+++||+.++.|.+......... ..
T Consensus 92 ~~~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~ 171 (434)
T 2epj_A 92 GAPGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTS 171 (434)
T ss_dssp SSCCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESS
T ss_pred CCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCC
Confidence 357788899999999999 6788888999999999998862 3456788888888876322110000 01
Q ss_pred CCc------EEEEeCCCCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCCCc
Q 013019 273 MGI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN 340 (451)
Q Consensus 273 ~Gi------~v~~vd~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~~~ 340 (451)
.|+ .+..++..|+++|++++++ .++++|++|..+|++|.+.+ +++|.++|++||++||+||++.....
T Consensus 172 ~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~ 251 (434)
T 2epj_A 172 AGVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRL 251 (434)
T ss_dssp TTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTS
T ss_pred CCCCCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeC
Confidence 233 2444555689999999873 24889988876778999888 99999999999999999999873211
Q ss_pred c-----ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH-hhC--CCccHHHHHHHHHhhHHHH--HHH
Q 013019 341 Q-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG--GALNPNAAYLIIRGMKTLH--LRV 410 (451)
Q Consensus 341 ~-----~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~-~~G--~~ls~~~a~l~lrgL~tl~--~Rl 410 (451)
. .......|++ |++|.+++ | ..+|++++++++++.++.... ..+ ...++..+..++..|+.+. ...
T Consensus 252 g~~~~~~~~~~~~di~--s~sK~l~~-G-~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~ 327 (434)
T 2epj_A 252 GLEGAQGYFNIEGDII--VLGKIIGG-G-FPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVY 327 (434)
T ss_dssp STTHHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHH
T ss_pred CcchhhHHhCCCCCee--eecchhcC-C-cceeeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHH
Confidence 1 1112346765 78899987 4 568999999988877654211 112 2356776666666665543 235
Q ss_pred HHHHHHHHHHHHHHHc
Q 013019 411 QQQNSTALRMAEILEA 426 (451)
Q Consensus 411 ~~~~~nA~~Lae~L~~ 426 (451)
++..++.+.+.+.|++
T Consensus 328 ~~~~~~~~~l~~~L~~ 343 (434)
T 2epj_A 328 SVSREAAKALEEAASE 343 (434)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5666677777777765
No 211
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.70 E-value=8.9e-16 Score=158.92 Aligned_cols=226 Identities=14% Similarity=0.164 Sum_probs=150.3
Q ss_pred cCCCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHHc-----c---CCCeEEEcCCCCcchHHHHHHhh-----
Q 013019 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALV-----P---AGGHIVTTTDCYRKTRIFIETVL----- 270 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~ga-e~~vv~sSG~aAi~~al~all-----~---~GD~VIv~~~~Y~~t~~~l~~~l----- 270 (451)
.++.++...+|+++|+++.+. .++++++||++|+..++..++ . ++|+|++.++.|.+........-
T Consensus 86 ~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 165 (452)
T 3n5m_A 86 MSQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQR 165 (452)
T ss_dssp TTSEEHHHHHHHHHHHHHHTSCEEEEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGG
T ss_pred cccCCHHHHHHHHHHHHhCCCCceEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhh
Confidence 456778899999999999875 237777889999999998877 4 78999999999977432221110
Q ss_pred ----hcCCcEEEEeCC--------CC---------HHHHHHhhc---CCCeEEEEEeCC-CCCcccccc----HHHHHHH
Q 013019 271 ----PKMGITATVIDP--------AD---------MEGLEAALN---NNNVSLFFTESP-TNPFLRCVD----VKLVSDL 321 (451)
Q Consensus 271 ----~~~Gi~v~~vd~--------~D---------~d~Le~ai~---~~~tklV~lesP-sNPtG~v~D----L~~Iael 321 (451)
......+.+++. .| +++|+++++ +.++++|++|.+ +| +|.+.+ +++|.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l 244 (452)
T 3n5m_A 166 RYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHET 244 (452)
T ss_dssp TTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHH
T ss_pred ccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHH
Confidence 001112333332 23 899999987 235899999998 89 998876 9999999
Q ss_pred HHhcCCEEEEecCCCCC-C-----ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHH---Hh---HhhCC
Q 013019 322 CHKKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN---LH---HVLGG 389 (451)
Q Consensus 322 A~~~g~~lVVD~tfa~~-~-----~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~---~~---~~~G~ 389 (451)
|++||++||+||++... . .........|++ +++|.+++ |-.+.|++++++++++.++. .. .....
T Consensus 245 ~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~-G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~ 321 (452)
T 3n5m_A 245 CQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDII--TMAKGITS-AYLPLSATAVKREIYEAFKGKGEYEFFRHINTF 321 (452)
T ss_dssp HHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEE--EECGGGGT-TSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSS
T ss_pred HHHcCCEEEEecchhCCCcccccchhhhcCCCCCEE--eecccccC-CCcceEEEEECHHHHHHHhhccCCCCccccCCC
Confidence 99999999999997532 1 112122234665 47899976 42467889999988887743 11 11123
Q ss_pred CccHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHH----HcCCCeEEEe
Q 013019 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEIL----EAHPKVLLLF 434 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L----~~~p~V~~V~ 434 (451)
..++..+..++..|+.+.. .+++..++.+.+.+.| .++|.+..+.
T Consensus 322 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 372 (452)
T 3n5m_A 322 GGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGDIR 372 (452)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 4567776666666654422 2455555555555555 4567665543
No 212
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.70 E-value=1.7e-15 Score=155.44 Aligned_cols=224 Identities=11% Similarity=0.111 Sum_probs=147.1
Q ss_pred cCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcchHHHHHHhh----------
Q 013019 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL---------- 270 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t~~~l~~~l---------- 270 (451)
.+|.++...+|+++|+++++. ++.+++++|++|+..++..+. ..+|+|++.++.|.+.........
T Consensus 80 ~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 159 (433)
T 1zod_A 80 SEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGP 159 (433)
T ss_dssp TTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCC
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCC
Confidence 356678889999999999973 667777889999999987653 345799999999976432211110
Q ss_pred hcCCcEEEEeCC------C---------CHHHHHHhhcC---CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCE
Q 013019 271 PKMGITATVIDP------A---------DMEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (451)
Q Consensus 271 ~~~Gi~v~~vd~------~---------D~d~Le~ai~~---~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~ 328 (451)
...|+....++. . |+++|++++++ +++++|++|..+||+|...+ +++|.++|++||++
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 239 (433)
T 1zod_A 160 AAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGML 239 (433)
T ss_dssp CCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCE
T ss_pred CCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCE
Confidence 011333222211 1 48899998873 34888888655688997665 99999999999999
Q ss_pred EEEecCCCCC-Ccc-----ccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHh--hCCCccHHHHHHHH
Q 013019 329 VCIDGTFATP-LNQ-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLII 400 (451)
Q Consensus 329 lVVD~tfa~~-~~~-----~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~--~G~~ls~~~a~l~l 400 (451)
||+||++... ... .......|++ |++|.+++ | .+.|++++++++++.++..... .....++..+..++
T Consensus 240 li~DEv~~~~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G-~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~ 315 (433)
T 1zod_A 240 LILDEAQTGVGRTGTMFACQRDGVTPDIL--TLSKTLGA-G-LPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGL 315 (433)
T ss_dssp EEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECHHHHT-T-SSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHH
T ss_pred EEEeccccCCCcCchHhHHhhcCCCCCEE--EecccccC-C-CCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHH
Confidence 9999998732 111 1112334654 78899987 4 5789999999998888763211 11234666655555
Q ss_pred HhhHHHH--HHHHHHHHHHHHHHHHHHc----CCCeEE
Q 013019 401 RGMKTLH--LRVQQQNSTALRMAEILEA----HPKVLL 432 (451)
Q Consensus 401 rgL~tl~--~Rl~~~~~nA~~Lae~L~~----~p~V~~ 432 (451)
..++.+. ...++..++.+.+.+.|++ +|.+..
T Consensus 316 aal~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 353 (433)
T 1zod_A 316 RVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGD 353 (433)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 5554432 2345555666666666654 465433
No 213
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.70 E-value=1.8e-16 Score=161.10 Aligned_cols=211 Identities=11% Similarity=0.032 Sum_probs=138.9
Q ss_pred hHHHHHHHHHhhhCCC---cEEE-eCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcC--CcEEEEeCCCC
Q 013019 211 TTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM--GITATVIDPAD 284 (451)
Q Consensus 211 t~~~Lee~LA~l~gae---~~vv-~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~--Gi~v~~vd~~D 284 (451)
..+++++++++++|.+ +.++ +++|++|+.+++.+++++| .+++....|+... . ...... |.++.+++..+
T Consensus 79 ~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~--~-~~~~~~~~g~~~~~v~~~~ 154 (398)
T 2fyf_A 79 LVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKF--A-SAVSKNPFVGEPIIITSDP 154 (398)
T ss_dssp HHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHH--H-HHHHHCTTSCCCEEEECCT
T ss_pred HHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHH--H-HHHHHhCCCCceEEEecCC
Confidence 4678999999999974 3455 5778899999999999887 2333333343211 1 112222 55555554321
Q ss_pred HHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcccCCcccc
Q 013019 285 MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHND 364 (451)
Q Consensus 285 ~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK~l~G~gd 364 (451)
-......+++ ++++|++++|+||||.+.|+++|.++ +|+++|+|++++.+...-.+. ++|+++.|+||++++++
T Consensus 155 g~~~~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~~-~~di~~~s~sK~~~~~g- 228 (398)
T 2fyf_A 155 GSAPEPQTDP-SVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDIA-ETDAYYFAPQKNFASDG- 228 (398)
T ss_dssp TCCCCCCCCT-TCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCGG-GCSEEEECTTSTTCSCS-
T ss_pred CCCCCccccC-CCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCcc-cCcEEEEecCcccCCCC-
Confidence 0000112555 48999999999999999999988887 899999999987543221222 47999999999999885
Q ss_pred ceeEEEEeCHHHHHHHHHHhH---------------------hhCCCccHHHHHHHHHhhHH------HHHHHHHHHHHH
Q 013019 365 VLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTA 417 (451)
Q Consensus 365 v~gG~Iv~~~eli~~lr~~~~---------------------~~G~~ls~~~a~l~lrgL~t------l~~Rl~~~~~nA 417 (451)
..|+++++++++++++.... ....+.+....+.+...++. +..+.++..+++
T Consensus 229 -g~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~ 307 (398)
T 2fyf_A 229 -GLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSS 307 (398)
T ss_dssp -SEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred -ceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 36889999998887754310 00122333333333333332 455567778889
Q ss_pred HHHHHHHHcCCCeEE
Q 013019 418 LRMAEILEAHPKVLL 432 (451)
Q Consensus 418 ~~Lae~L~~~p~V~~ 432 (451)
+.+.+.|++.|+++.
T Consensus 308 ~~l~~~L~~~~g~~~ 322 (398)
T 2fyf_A 308 QRLYSWAQERPYTTP 322 (398)
T ss_dssp HHHHHHHHHSTTEEE
T ss_pred HHHHHHHHHcCCcee
Confidence 999999999887643
No 214
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.69 E-value=8.1e-16 Score=161.49 Aligned_cols=220 Identities=13% Similarity=0.087 Sum_probs=155.0
Q ss_pred CchhHHHHHHH----HHhhhCCC-----------cEEEeCCHHHHHHHHHHHHcc-------------------CCCeEE
Q 013019 208 GNPTTVVVEEK----MSALEGAE-----------STVIMASGMSASTVMLLALVP-------------------AGGHIV 253 (451)
Q Consensus 208 ~npt~~~Lee~----LA~l~gae-----------~~vv~sSG~aAi~~al~all~-------------------~GD~VI 253 (451)
..|...+||+. +++++|.+ ..+++++|++|+..++.+... +++.|+
T Consensus 107 ~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi 186 (475)
T 3k40_A 107 ASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGY 186 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEE
T ss_pred CCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEE
Confidence 46777777765 46777764 478889999998888776531 346899
Q ss_pred EcCCCCcchHHHHHHhhhcCCcEEEEeCC----CCHHHHHHhhcCC-----CeEEEEEeCCCCCccccccHHHHHHHHHh
Q 013019 254 TTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHK 324 (451)
Q Consensus 254 v~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----~D~d~Le~ai~~~-----~tklV~lesPsNPtG~v~DL~~IaelA~~ 324 (451)
++...|.+..... ...|+++..++. .|+++|+++|+++ .+.+|++..++|++|.+.|+++|+++|++
T Consensus 187 ~s~~~H~s~~~~~----~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~ 262 (475)
T 3k40_A 187 CSDQAHSSVERAG----LLGGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNK 262 (475)
T ss_dssp EETTSCHHHHHHH----HHHTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred ECCCchHHHHHHH----HHcCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHH
Confidence 9999998866443 345888888876 4899999999753 16788888999999999999999999999
Q ss_pred cCCEEEEecCCCCCCcc----ccccC---CCcEEEECCcccCCccccceeEEEEe-CHHHHH-HHHHHhHhh--------
Q 013019 325 KGAIVCIDGTFATPLNQ----KALSL---GADLVLHSATKFIGGHNDVLAGSISG-SGKLVT-QIRNLHHVL-------- 387 (451)
Q Consensus 325 ~g~~lVVD~tfa~~~~~----~pl~~---GaDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~-~lr~~~~~~-------- 387 (451)
+|+++++|++++.+... +.... ++|.++.++||+++++. .+|+++. +++++. .+.....++
T Consensus 263 ~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~--g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~ 340 (475)
T 3k40_A 263 HNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNF--DCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSA 340 (475)
T ss_dssp TTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCS--SCEEEEESSGGGC-------------------
T ss_pred hCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCC--ceEEEEEeCHHHHHHHhcCCccccCCCcCCCC
Confidence 99999999998764221 11112 36999999999998775 2455554 444432 221110000
Q ss_pred ----------CCCccHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Q 013019 388 ----------GGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAEILEAHPKVLLL 433 (451)
Q Consensus 388 ----------G~~ls~~~a~l~lr--gL~tl~~Rl~~~~~nA~~Lae~L~~~p~V~~V 433 (451)
+........|.+++ +.+.+..++++..++++.+++.|++.|+++.+
T Consensus 341 ~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~ 398 (475)
T 3k40_A 341 PDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELA 398 (475)
T ss_dssp --------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEES
T ss_pred CCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 00112344455444 45667788899999999999999999988654
No 215
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.68 E-value=3.6e-16 Score=160.75 Aligned_cols=216 Identities=16% Similarity=0.167 Sum_probs=146.8
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHHHHHHh---------hh-cC
Q 013019 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV---------LP-KM 273 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~-gae~~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l~~~---------l~-~~ 273 (451)
+.++...+|+++|++++ +.+..++++||++|+..++..+.. .+++|++.++.|.+........ .. ..
T Consensus 90 ~~~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 169 (429)
T 3k28_A 90 APTEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSP 169 (429)
T ss_dssp SCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCT
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcC
Confidence 67888999999999998 457788888999999999987654 5688999888887532110000 00 00
Q ss_pred Cc------EEEEeCCCCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCCCc-
Q 013019 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN- 340 (451)
Q Consensus 274 Gi------~v~~vd~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~~~- 340 (451)
++ .+..++..|+++|++++++ +++++|++|.++|++|.+.+ +++|.++|++||++||+||+|.....
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g 249 (429)
T 3k28_A 170 GVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRVA 249 (429)
T ss_dssp TCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTSS
T ss_pred CCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Confidence 11 2334455689999998862 24888999887778888887 99999999999999999999863211
Q ss_pred ----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHh-h--CCCccHHHHHHHHHhhHHH-HHHHHH
Q 013019 341 ----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV-L--GGALNPNAAYLIIRGMKTL-HLRVQQ 412 (451)
Q Consensus 341 ----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~-~--G~~ls~~~a~l~lrgL~tl-~~Rl~~ 412 (451)
........|++ +++|.+++ | .++|++++++++++.++..... . ....++..+..++..++.+ ...+++
T Consensus 250 ~~~~~~~~~~~~di~--t~sK~~~~-G-~~iG~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~ 325 (429)
T 3k28_A 250 YNCGQGYYGVTPDLT--CLGKVIGG-G-LPVGAYGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLTPESYVE 325 (429)
T ss_dssp TTHHHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCCHHHHHH
T ss_pred cchHHHHhCCCCcee--hhhhhhcC-C-CCeEEEEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 11122234655 57899975 4 5789999999988876542211 1 1245666666555555432 344556
Q ss_pred HHHHHHHHHHHHHc
Q 013019 413 QNSTALRMAEILEA 426 (451)
Q Consensus 413 ~~~nA~~Lae~L~~ 426 (451)
..++.+.+.+.|++
T Consensus 326 ~~~~~~~l~~~L~~ 339 (429)
T 3k28_A 326 FERKAEMLEAGLRK 339 (429)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 66667777666654
No 216
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.68 E-value=6.9e-16 Score=158.49 Aligned_cols=216 Identities=15% Similarity=0.143 Sum_probs=143.6
Q ss_pred CCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcchHHHHH----------HhhhcC
Q 013019 207 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIE----------TVLPKM 273 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~g-ae~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t~~~l~----------~~l~~~ 273 (451)
|.++...+|+++|+++.+ .+.+++++||++|+..++.... ..+++||+.++.|.+.....- ......
T Consensus 90 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 169 (429)
T 4e77_A 90 APTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSP 169 (429)
T ss_dssp SCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCT
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcC
Confidence 578889999999999984 5778888999999999987543 356789998888877442110 000011
Q ss_pred C------cEEEEeCCCCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCC---
Q 013019 274 G------ITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (451)
Q Consensus 274 G------i~v~~vd~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~--- 338 (451)
+ ..+..++..|+++|++++++ .++++|++|..++.+|.+.+ +++|.++|++||++||+||++...
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g 249 (429)
T 4e77_A 170 GVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVA 249 (429)
T ss_dssp TSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTB
T ss_pred CCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccC
Confidence 1 13445566689999999873 24778887655555566666 999999999999999999998732
Q ss_pred --CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh---HhhCCCccHHHHHHHHHhhHHH--HHHHH
Q 013019 339 --LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPNAAYLIIRGMKTL--HLRVQ 411 (451)
Q Consensus 339 --~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~---~~~G~~ls~~~a~l~lrgL~tl--~~Rl~ 411 (451)
..........|++ |++|.+++ | .++|++++++++++.++... .......++..+..++..|+.+ ...++
T Consensus 250 ~~~~~~~~~~~pdi~--t~sK~~~~-G-~~~G~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 325 (429)
T 4e77_A 250 LAGAQDYYHVIPDLT--CLGKIIGG-G-MPVGAFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYE 325 (429)
T ss_dssp TTCHHHHTTCCCSEE--EEEGGGGT-T-SCCEEEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHH
T ss_pred cchHHHhcCCCCCee--eecccccC-C-CCeEEEEECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 1112122234664 78899985 4 57899999999888766421 1111246777777666666644 23355
Q ss_pred HHHHHHHHHHHHHHc
Q 013019 412 QQNSTALRMAEILEA 426 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~ 426 (451)
+..++.+.+.+.|++
T Consensus 326 ~~~~~~~~l~~~L~~ 340 (429)
T 4e77_A 326 TLTELTDSLATGLRH 340 (429)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 555666666666544
No 217
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.68 E-value=2.8e-15 Score=155.86 Aligned_cols=229 Identities=13% Similarity=0.073 Sum_probs=146.7
Q ss_pred ccccCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHHHHHHh-------
Q 013019 202 FEYGRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV------- 269 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~g---ae~~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l~~~------- 269 (451)
+.+.++.++...+|+++|+++.+ .+.+++++||++|+..++..++. .+++|++.++.|.+........
T Consensus 96 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~ 175 (451)
T 3oks_A 96 TCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPY 175 (451)
T ss_dssp CTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTT
T ss_pred ccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCccc
Confidence 44556788889999999999986 35788889999999999977654 4478999999998743222111
Q ss_pred ---hhcCCcEEEEeCCC------------------CHHHHHHhh----cCCCeEEEEEeCCCCCcccccc----HHHHHH
Q 013019 270 ---LPKMGITATVIDPA------------------DMEGLEAAL----NNNNVSLFFTESPTNPFLRCVD----VKLVSD 320 (451)
Q Consensus 270 ---l~~~Gi~v~~vd~~------------------D~d~Le~ai----~~~~tklV~lesPsNPtG~v~D----L~~Iae 320 (451)
.......+..++.. +++.+++++ .++++++|++|..++..|.+.+ +++|.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~ 255 (451)
T 3oks_A 176 KDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLD 255 (451)
T ss_dssp TTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHH
T ss_pred ccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHH
Confidence 01111134444432 233333443 3334777777655555556555 999999
Q ss_pred HHHhcCCEEEEecCCCCC-C-----ccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHH
Q 013019 321 LCHKKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 394 (451)
Q Consensus 321 lA~~~g~~lVVD~tfa~~-~-----~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~ 394 (451)
+|++||++||+||+|... . .........|++ +++|.+++ | .+.|++++++++++.++..........++.
T Consensus 256 l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~-G-~~iG~v~~~~~~~~~~~~~~~~~t~~~~~~ 331 (451)
T 3oks_A 256 WCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLI--VTAKGIAG-G-LPLSAVTGRAEIMDSPHVSGLGGTYGGNPI 331 (451)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-T-SSCEEEEEEHHHHTCSCTTSBCCSSSSCHH
T ss_pred HHHHcCCEEEEEecccCCCccccchhhhhcCCCCCee--eehhhhhC-C-cceEEEEECHHHHhhhcCCCcCCCCCCCHH
Confidence 999999999999997632 1 112222335666 67899987 4 568889999988887764443333445777
Q ss_pred HHHHHHHhhHHHHH--HHHHHHHHHHHHHHHH----HcCCCeEEEe
Q 013019 395 AAYLIIRGMKTLHL--RVQQQNSTALRMAEIL----EAHPKVLLLF 434 (451)
Q Consensus 395 ~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L----~~~p~V~~V~ 434 (451)
.+..++..|+.+.. .+++..++.+.+.+.| .++|.+..+.
T Consensus 332 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 377 (451)
T 3oks_A 332 ACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDVR 377 (451)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence 77666666654432 2444445555555544 4567665543
No 218
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.67 E-value=5.3e-15 Score=155.14 Aligned_cols=229 Identities=14% Similarity=0.145 Sum_probs=153.6
Q ss_pred ccccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc--------CCCeEEEcCCCCcchHHHHHHh--
Q 013019 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV-- 269 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all~--------~GD~VIv~~~~Y~~t~~~l~~~-- 269 (451)
+.+.++.++...+|+++|+++.+. +.+++++||++|+..++..+.. .+++||+.++.|.+........
T Consensus 91 ~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~ 170 (472)
T 3hmu_A 91 NTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGG 170 (472)
T ss_dssp CSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSC
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccC
Confidence 334567788999999999999853 6788888999999999988775 4678999999997733211111
Q ss_pred -------hhcCCcEEEEeCCC---------C--------HHHHHHhhcC---CCeEEEEEeCCCCCcccccc----HHHH
Q 013019 270 -------LPKMGITATVIDPA---------D--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLV 318 (451)
Q Consensus 270 -------l~~~Gi~v~~vd~~---------D--------~d~Le~ai~~---~~tklV~lesPsNPtG~v~D----L~~I 318 (451)
+. ....+..++.. | +++|++++++ +++++|++|.++|++|.+.+ +++|
T Consensus 171 ~~~~~~~~~-~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l 249 (472)
T 3hmu_A 171 MAGMHAQSG-LIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEI 249 (472)
T ss_dssp CHHHHHTTC-CCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHH
T ss_pred ChhhccccC-CCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHH
Confidence 11 11123333321 2 7888888862 34899999988888888876 9999
Q ss_pred HHHHHhcCCEEEEecCCCCC-Cc-----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhh--CCC
Q 013019 319 SDLCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL--GGA 390 (451)
Q Consensus 319 aelA~~~g~~lVVD~tfa~~-~~-----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~--G~~ 390 (451)
.++|+++|++||+||++... .. ........|+++ ++|.++|.+ ...|++++++++++.+....... ...
T Consensus 250 ~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t--~sK~l~gg~-~plG~v~~~~~i~~~~~~~~~~~~~t~~ 326 (472)
T 3hmu_A 250 QRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMT--IAKGLSSGY-APIGGSIVCDEVAHVIGKDEFNHGYTYS 326 (472)
T ss_dssp HHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEE--ECGGGTTTS-SCCEEEEEEHHHHHHHTTSCBCCCCTTT
T ss_pred HHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceee--echhhhcCC-cceEEEEECHHHHHhcccCCccccCCCC
Confidence 99999999999999997632 11 111223357775 679998743 35788899999988873211111 233
Q ss_pred ccHHHHHHHHHhhHHHH--HHHHHHH-HHHHHHHHHHHc---CCCeEEEe
Q 013019 391 LNPNAAYLIIRGMKTLH--LRVQQQN-STALRMAEILEA---HPKVLLLF 434 (451)
Q Consensus 391 ls~~~a~l~lrgL~tl~--~Rl~~~~-~nA~~Lae~L~~---~p~V~~V~ 434 (451)
.++..+..++..|+.+. ..+++.. ++...+.+.|++ +|.|..|.
T Consensus 327 ~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr 376 (472)
T 3hmu_A 327 GHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGEAK 376 (472)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 56777666666666543 2345555 566666666654 56665543
No 219
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.67 E-value=8e-16 Score=157.73 Aligned_cols=216 Identities=17% Similarity=0.195 Sum_probs=146.0
Q ss_pred CCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcchHHHHH----------HhhhcC
Q 013019 207 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIE----------TVLPKM 273 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~g-ae~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t~~~l~----------~~l~~~ 273 (451)
+.++...+|+++|+++++ .+..+++++|++|+..++.... ..+++||+.++.|.+...... ......
T Consensus 89 ~~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 168 (427)
T 3fq8_A 89 APCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSP 168 (427)
T ss_dssp SCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCS
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCC
Confidence 378889999999999985 5778888899999999884332 345789998888866321100 000011
Q ss_pred Cc------EEEEeCCCCHHHHHHhhcCC--CeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCCCc-
Q 013019 274 GI------TATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN- 340 (451)
Q Consensus 274 Gi------~v~~vd~~D~d~Le~ai~~~--~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~~~- 340 (451)
|+ .+..++..|+++|++++++. ++++|++|.++|++|.+.+ +++|.++|++||++||+||+|.....
T Consensus 169 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g 248 (427)
T 3fq8_A 169 GVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIA 248 (427)
T ss_dssp SSCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTB
T ss_pred CCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Confidence 11 24444556899999998752 5899999998899999988 99999999999999999999873311
Q ss_pred ----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH-hhCC--CccHHHHHHHHHhhHHH--HHHHH
Q 013019 341 ----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGG--ALNPNAAYLIIRGMKTL--HLRVQ 411 (451)
Q Consensus 341 ----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~-~~G~--~ls~~~a~l~lrgL~tl--~~Rl~ 411 (451)
........|++ |++|.+++ | .++|++++++++++.++.... ..+. ..++..+..++..++.+ ...++
T Consensus 249 ~~~~~~~~~~~~di~--t~sK~~~~-G-~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~ 324 (427)
T 3fq8_A 249 YGGVQEKFGVTPDLT--TLGKIIGG-G-LPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYE 324 (427)
T ss_dssp TTHHHHHTTCCCSEE--EECGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHH
T ss_pred cchhhHhcCCCCChh--hhhhhhhC-C-cceEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHH
Confidence 11122234654 67799985 4 578999999998887764321 1222 34677666666555543 22345
Q ss_pred HHHHHHHHHHHHHHc
Q 013019 412 QQNSTALRMAEILEA 426 (451)
Q Consensus 412 ~~~~nA~~Lae~L~~ 426 (451)
+..++.+.+.+.|++
T Consensus 325 ~~~~~~~~~~~~l~~ 339 (427)
T 3fq8_A 325 YLDQITKRLSDGLLA 339 (427)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 555666666665543
No 220
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.67 E-value=2e-15 Score=154.81 Aligned_cols=215 Identities=18% Similarity=0.158 Sum_probs=146.2
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHH--HccCCCeEEEcCCCCcchHHHHHHhh----------hcC
Q 013019 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLA--LVPAGGHIVTTTDCYRKTRIFIETVL----------PKM 273 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~-gae~~vv~sSG~aAi~~al~a--ll~~GD~VIv~~~~Y~~t~~~l~~~l----------~~~ 273 (451)
+.++...+|+++|++++ +.+.+++++||++|+..++.. .+..+|+||+.++.|.+......... ...
T Consensus 89 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~ 168 (424)
T 2e7u_A 89 APSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSA 168 (424)
T ss_dssp SCCHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESST
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCC
Confidence 56788899999999998 567888889999999998875 23446889999999977332110000 012
Q ss_pred Cc------EEEEeCCCCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCCCcc
Q 013019 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQ 341 (451)
Q Consensus 274 Gi------~v~~vd~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~~~~ 341 (451)
|+ .+..++..|+++|++++++ +++++|++|..++++|.+.+ +++|.++ ++||++||+||++......
T Consensus 169 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g 247 (424)
T 2e7u_A 169 GVPEEYAKLTLVLEYNDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLA 247 (424)
T ss_dssp TCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSS
T ss_pred CCCCccCCceEeCCCCCHHHHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccc
Confidence 32 3444566789999998863 24777777543344898887 9999999 9999999999998733111
Q ss_pred c-----cccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhH-hhC--CCccHHHHHHHHHhhHHHH---HHH
Q 013019 342 K-----ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG--GALNPNAAYLIIRGMKTLH---LRV 410 (451)
Q Consensus 342 ~-----pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~-~~G--~~ls~~~a~l~lrgL~tl~---~Rl 410 (451)
. ......|++ |++|.+++ | ..+|++++++++++.++.... ..+ ...++..+..++..++.+. ...
T Consensus 248 ~~~~~~~~~~~~di~--s~sK~l~~-G-~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 323 (424)
T 2e7u_A 248 FGGATELLGLKPDLV--TLGKILGG-G-LPAAAYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYY 323 (424)
T ss_dssp TTHHHHHHTCCCSEE--EECGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHH
T ss_pred hhHHHHHhCCCcchh--hhhhhhhC-C-cceEEEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 1 112235765 78999996 4 568999999988877654211 111 2456666666555555443 245
Q ss_pred HHHHHHHHHHHHHHHc
Q 013019 411 QQQNSTALRMAEILEA 426 (451)
Q Consensus 411 ~~~~~nA~~Lae~L~~ 426 (451)
++..++.+.+.+.|++
T Consensus 324 ~~~~~~~~~l~~~L~~ 339 (424)
T 2e7u_A 324 AYLEDLGARLEAGLKE 339 (424)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6666777777777765
No 221
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.66 E-value=6.4e-15 Score=154.59 Aligned_cols=226 Identities=13% Similarity=0.125 Sum_probs=153.7
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc--------CCCeEEEcCCCCcchHHHHHHh------
Q 013019 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV------ 269 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~g--ae~~vv~sSG~aAi~~al~all~--------~GD~VIv~~~~Y~~t~~~l~~~------ 269 (451)
.+.++...+|+++|+++.+ .+.+++++||++|+..++..++. .+++||+.++.|.+........
T Consensus 93 ~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~ 172 (476)
T 3i5t_A 93 YMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGN 172 (476)
T ss_dssp TCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGG
T ss_pred ccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhh
Confidence 5778899999999999985 47788889999999999988764 3578999999998743221111
Q ss_pred ---hhcCCcEEEEeCCC--------C--------HHHHHHhhcC---CCeEEEEEeCCCCCcccccc----HHHHHHHHH
Q 013019 270 ---LPKMGITATVIDPA--------D--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (451)
Q Consensus 270 ---l~~~Gi~v~~vd~~--------D--------~d~Le~ai~~---~~tklV~lesPsNPtG~v~D----L~~IaelA~ 323 (451)
.......+.+++.. | +++|++++++ +++++|++|.++|++|.+.. +++|.++|+
T Consensus 173 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~ 252 (476)
T 3i5t_A 173 WPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICE 252 (476)
T ss_dssp CTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHH
T ss_pred ccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHH
Confidence 00011123333311 1 7888888862 34899999999999887554 999999999
Q ss_pred hcCCEEEEecCCCCC-Cc-----cc-cccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHh-------HhhCC
Q 013019 324 KKGAIVCIDGTFATP-LN-----QK-ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGG 389 (451)
Q Consensus 324 ~~g~~lVVD~tfa~~-~~-----~~-pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~-------~~~G~ 389 (451)
+||++||+||++... .. .. ......|+++ ++|.+++ |-...|++++++++++.+.... .....
T Consensus 253 ~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t--~sK~l~~-G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~ 329 (476)
T 3i5t_A 253 KHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIIT--FAKGVTS-GYVPLGGLAISEAVLARISGENAKGSWFTNGYTY 329 (476)
T ss_dssp HTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEE--ECGGGGT-TSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTT
T ss_pred HcCCEEEEEecccCCccccCceeeecccCCCcchhh--hhhhhcC-CCcCeEEEEECHHHHHHHhcCCcccccccccCCC
Confidence 999999999997632 11 11 1222357775 6799986 2145788999999988876531 11123
Q ss_pred CccHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHc---CCCeEEEe
Q 013019 390 ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAEILEA---HPKVLLLF 434 (451)
Q Consensus 390 ~ls~~~a~l~lrgL~tl~--~Rl~~~~~nA~~Lae~L~~---~p~V~~V~ 434 (451)
..++..+..++..|+.+. ..+++..++.+.+.+.|++ +|.+..+.
T Consensus 330 ~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~ 379 (476)
T 3i5t_A 330 SNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLRDLPGVAETR 379 (476)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEEE
T ss_pred CcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 456777766666666543 2356666777777777764 45565543
No 222
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.65 E-value=4.6e-15 Score=154.39 Aligned_cols=228 Identities=13% Similarity=0.098 Sum_probs=144.9
Q ss_pred ccccCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHHHHHHhh------
Q 013019 202 FEYGRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVL------ 270 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~g---ae~~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l~~~l------ 270 (451)
+.+.++.++...+|+++|+++.+ .+.+++++||++|+..++..+.. .+++||+.++.|.+........-
T Consensus 99 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 178 (453)
T 4ffc_A 99 TCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPY 178 (453)
T ss_dssp CTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTT
T ss_pred cccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCccc
Confidence 44556788999999999999986 35688889999999999976543 45889999999987433221110
Q ss_pred ----hcCCcEEEEeCCC----C-------------HHHHHHhhcCCCeEEEEEeCCCCCc-ccccc----HHHHHHHHHh
Q 013019 271 ----PKMGITATVIDPA----D-------------MEGLEAALNNNNVSLFFTESPTNPF-LRCVD----VKLVSDLCHK 324 (451)
Q Consensus 271 ----~~~Gi~v~~vd~~----D-------------~d~Le~ai~~~~tklV~lesPsNPt-G~v~D----L~~IaelA~~ 324 (451)
......+..++.. | ++.|++++.++++.+|++| |.|++ |.+.+ +++|.++|++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~e-p~~~~gG~~~~~~~~l~~l~~l~~~ 257 (453)
T 4ffc_A 179 KSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIE-PIQGEGGFIVPAPGFLATLTAWASE 257 (453)
T ss_dssp TTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEEC-SSBTTTTSBCCCTTHHHHHHHHHHH
T ss_pred ccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEc-CCCCCCCcccCCHHHHHHHHHHHHH
Confidence 0111133444322 2 3667777755446666665 55555 45544 9999999999
Q ss_pred cCCEEEEecCCCCC-Cc-----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHH
Q 013019 325 KGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL 398 (451)
Q Consensus 325 ~g~~lVVD~tfa~~-~~-----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l 398 (451)
||++||+||+|... .. ........|++ +++|.+++ | .+.|++++++++++.++..........++..+..
T Consensus 258 ~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~--t~sK~~~~-G-~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~~~aa 333 (453)
T 4ffc_A 258 NGVVFIADEVQTGFARTGAWFASEHEGIVPDIV--TMAKGIAG-G-MPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCAA 333 (453)
T ss_dssp HTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGT-T-SSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHH
T ss_pred cCCEEEEecCccCCCcccccchhhhcCCCcchH--hhhhhhcC-C-cCeEEEEECHHHHhhhcccCcCCCCCcCHHHHHH
Confidence 99999999997532 11 11112234555 57899987 5 5788999999888877644332233456776666
Q ss_pred HHHhhHHHHH--HHHHHHHHHHHHHHHH----HcCCCeEEEe
Q 013019 399 IIRGMKTLHL--RVQQQNSTALRMAEIL----EAHPKVLLLF 434 (451)
Q Consensus 399 ~lrgL~tl~~--Rl~~~~~nA~~Lae~L----~~~p~V~~V~ 434 (451)
++..|+.+.. .+++..++.+.+.+.| .++|.+..+.
T Consensus 334 a~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 375 (453)
T 4ffc_A 334 AVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEVR 375 (453)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEE
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence 5555554322 2344444444444444 4567665543
No 223
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.63 E-value=6.8e-15 Score=152.85 Aligned_cols=221 Identities=13% Similarity=0.096 Sum_probs=144.1
Q ss_pred cCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHc---c-C----------CCeEEEcCCCCcchHHHH-
Q 013019 205 GRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV---P-A----------GGHIVTTTDCYRKTRIFI- 266 (451)
Q Consensus 205 ~R~~npt~~~Lee~LA~l~g---ae~~vv~sSG~aAi~~al~all---~-~----------GD~VIv~~~~Y~~t~~~l- 266 (451)
.+|.++...+|+++|+++++ .++.++++||++|+..++..+. + + ||+||+.++.|.+.....
T Consensus 96 ~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~ 175 (449)
T 2cjg_A 96 SDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTL 175 (449)
T ss_dssp TTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGG
T ss_pred cccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchh
Confidence 35778888999999999985 3677888899999999887543 2 2 899999999997632210
Q ss_pred ---------HHhhhcCCcEEEEeCCCC---------------HHHHHHhhc--CCCeEEEEEeCCCCCcccccc----HH
Q 013019 267 ---------ETVLPKMGITATVIDPAD---------------MEGLEAALN--NNNVSLFFTESPTNPFLRCVD----VK 316 (451)
Q Consensus 267 ---------~~~l~~~Gi~v~~vd~~D---------------~d~Le~ai~--~~~tklV~lesPsNPtG~v~D----L~ 316 (451)
......+...+.+++..| +++|+++++ ..++++|++|.++||+|...+ ++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~ 255 (449)
T 2cjg_A 176 SLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFA 255 (449)
T ss_dssp GTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHH
T ss_pred hhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHH
Confidence 011111112455555444 234888885 135899999877799997666 99
Q ss_pred HHHHHHHhcCCEEEEecCCCCC-Cc-----cccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHH-----HhH
Q 013019 317 LVSDLCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-----LHH 385 (451)
Q Consensus 317 ~IaelA~~~g~~lVVD~tfa~~-~~-----~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~-----~~~ 385 (451)
+|.++|++||++||+||+|... .. ........|++ +++|.+ + .|++++++++++.+.. ...
T Consensus 256 ~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l--~----iG~~~~~~~~~~~l~~~~~~~~~~ 327 (449)
T 2cjg_A 256 AMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV--AFGKKT--Q----VCGVMAGRRVDEVADNVFAVPSRL 327 (449)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGG--S----SEEEEECGGGGGSTTCTTTSTTSS
T ss_pred HHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEE--EecCcc--c----EEEEEECHHHhhhhhhcccCCccc
Confidence 9999999999999999998632 11 12223345766 578988 2 5777888887765321 111
Q ss_pred hhCCCccHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHc----CCC-eEEE
Q 013019 386 VLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAEILEA----HPK-VLLL 433 (451)
Q Consensus 386 ~~G~~ls~~~a~l~lrgL~tl~--~Rl~~~~~nA~~Lae~L~~----~p~-V~~V 433 (451)
......++..+..++..|+.+. ...++..++...+.+.|++ +|. +..+
T Consensus 328 ~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~ 382 (449)
T 2cjg_A 328 NSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDP 382 (449)
T ss_dssp CCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE
Confidence 1112345666665555555432 2345566677777777764 465 5443
No 224
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.61 E-value=7.4e-14 Score=144.89 Aligned_cols=219 Identities=16% Similarity=0.091 Sum_probs=135.5
Q ss_pred ccccCCCchhHHHHHHHHHhhh-CC------CcEEEeCCHHHHHHHHHHH----HccCCCeEEEcCCCCcchHHHHHHhh
Q 013019 202 FEYGRYGNPTTVVVEEKMSALE-GA------ESTVIMASGMSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIETVL 270 (451)
Q Consensus 202 ~~Y~R~~npt~~~Lee~LA~l~-ga------e~~vv~sSG~aAi~~al~a----ll~~GD~VIv~~~~Y~~t~~~l~~~l 270 (451)
+.|. +.....+|++.++++. |. ...+.+.+|+.|+..++.. ++.+||+|++++|.|+.....+
T Consensus 81 ~~Y~--p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~---- 154 (420)
T 4h51_A 81 YEYL--PISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVV---- 154 (420)
T ss_dssp CCCC--CTTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHH----
T ss_pred CCCC--CcCChHHHHHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHH----
Confidence 4565 3444556777777764 32 1233456777776655543 4579999999999999866544
Q ss_pred hcCCcE-EEE---eCC----CCHHHHHHhhc--CCCeEEEEEeCCCCCcccccc---HHHHHHHHHhcCCEEEEecCCCC
Q 013019 271 PKMGIT-ATV---IDP----ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFAT 337 (451)
Q Consensus 271 ~~~Gi~-v~~---vd~----~D~d~Le~ai~--~~~tklV~lesPsNPtG~v~D---L~~IaelA~~~g~~lVVD~tfa~ 337 (451)
+..|.+ +.. .+. .|.+.+.+.+. ..+++++++.+|+||||.+.+ +++|+++|+++++++++|++|..
T Consensus 155 ~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~ 234 (420)
T 4h51_A 155 KAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQG 234 (420)
T ss_dssp HHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTT
T ss_pred HHcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhh
Confidence 334543 322 221 26666666553 224789999999999999985 77899999999999999999865
Q ss_pred CCccc----c------ccCC-CcEEEECCcccCCccccceeEEEEeCHHHHH-------HHHHHhHhhCCCccHHHHHHH
Q 013019 338 PLNQK----A------LSLG-ADLVLHSATKFIGGHNDVLAGSISGSGKLVT-------QIRNLHHVLGGALNPNAAYLI 399 (451)
Q Consensus 338 ~~~~~----p------l~~G-aDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~-------~lr~~~~~~G~~ls~~~a~l~ 399 (451)
..... + .+.+ .-+++.|+||.++..|. +.|++++..+..+ ++.........+.+...+..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~ 313 (420)
T 4h51_A 235 YASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSE-RAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLA 313 (420)
T ss_dssp TTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGG-CEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHH
T ss_pred hccCCcccchHHHHhHHhhCceEEEEeccccccccccC-ceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHH
Confidence 43211 1 1111 24889999999998874 5677665433222 222233333344455554443
Q ss_pred HHhh----------HHHHHHHHHHHHHHHHHHHHHHcC
Q 013019 400 IRGM----------KTLHLRVQQQNSTALRMAEILEAH 427 (451)
Q Consensus 400 lrgL----------~tl~~Rl~~~~~nA~~Lae~L~~~ 427 (451)
...+ +.+....+++.+.++.|.+.|++.
T Consensus 314 ~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~ 351 (420)
T 4h51_A 314 HLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRL 351 (420)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3322 123333455666777788888765
No 225
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.60 E-value=1.3e-14 Score=150.84 Aligned_cols=203 Identities=10% Similarity=0.117 Sum_probs=139.8
Q ss_pred HHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHccC----CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC------
Q 013019 216 EEKMSALEGAE---STVIMASGMSASTVMLLALVPA----GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ 282 (451)
Q Consensus 216 ee~LA~l~gae---~~vv~sSG~aAi~~al~all~~----GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~------ 282 (451)
.++|..+ |.+ ..++++.++.++.+++++.+++ ||.||+++.+|.+.+.. +...|++..++++
T Consensus 123 ld~L~~~-G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kA----liL~Gl~Pv~V~p~~d~~~ 197 (501)
T 3hl2_A 123 LDIIKLA-GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKS----MITAGFEPVVIENVLEGDE 197 (501)
T ss_dssp HHHHHHT-TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHH----HHHTTCEEEEECEEEETTE
T ss_pred HHHHHHc-CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHH----HHHcCCeEEEEeeeecccc
Confidence 4444444 643 3556666666777777777774 49999999999887644 3445777777654
Q ss_pred --CCHHHHHHhhcCC---CeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc------cccccCC-CcE
Q 013019 283 --ADMEGLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLG-ADL 350 (451)
Q Consensus 283 --~D~d~Le~ai~~~---~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~------~~pl~~G-aDi 350 (451)
.|+++|+++|+++ .+.+|+..+++|..+.+.||++|+++||+||++++|||+|+.-+. ...+.+| +|+
T Consensus 198 ~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~ 277 (501)
T 3hl2_A 198 LRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDA 277 (501)
T ss_dssp EEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCE
T ss_pred cCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcE
Confidence 2789999999652 234555544455445668999999999999999999999887531 2345668 999
Q ss_pred EEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCC--CccHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHH
Q 013019 351 VLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG--ALNPNAAYLII--RGMKTLHLRVQQQNSTALRMAEILE 425 (451)
Q Consensus 351 Vv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~--~ls~~~a~l~l--rgL~tl~~Rl~~~~~nA~~Lae~L~ 425 (451)
++.|++|.+-.+- .||++.. ++++++++.... .|. .....+.|+.+ .|.+.+...+++..++++.+.+.|+
T Consensus 278 vVqS~HK~llvpI--GG~ii~~~d~e~l~~~~~~y--PGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~ 353 (501)
T 3hl2_A 278 FVQSLDKNFMVPV--GGAIIAGFNDSFIQEISKMY--PGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIK 353 (501)
T ss_dssp EEEEHHHHHCCCS--SCEEEEESCHHHHHHHHHTS--CSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecccccceeec--CceEEEeCCHHHHHHHHHhC--CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987662 2444434 567777764432 232 22334456544 3556677778888899999999988
Q ss_pred cC
Q 013019 426 AH 427 (451)
Q Consensus 426 ~~ 427 (451)
+.
T Consensus 354 ~l 355 (501)
T 3hl2_A 354 KL 355 (501)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 226
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.58 E-value=4e-14 Score=147.77 Aligned_cols=210 Identities=10% Similarity=0.102 Sum_probs=141.0
Q ss_pred HHHHHHHHhhhCCCc---EEEeCCHHHHHHHHHHHHccC----CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---
Q 013019 213 VVVEEKMSALEGAES---TVIMASGMSASTVMLLALVPA----GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (451)
Q Consensus 213 ~~Lee~LA~l~gae~---~vv~sSG~aAi~~al~all~~----GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--- 282 (451)
+.++.++.++.|.+. .+++++++.++.+++++.+++ |+.||+++.+|.+... .+...|+...++++
T Consensus 101 ~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~k----Al~l~Gl~p~~v~~~~~ 176 (450)
T 3bc8_A 101 NSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFK----SMVTAGFEPVVIENVLE 176 (450)
T ss_dssp HHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHH----HHHHTTCEEEEECCEEE
T ss_pred HHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHH----HHHHcCCeeEEEEeeec
Confidence 345666677778642 366666664444455555554 8999999999988764 34456777776654
Q ss_pred -----CCHHHHHHhhcCCC--eEEEEEeCCCC-CccccccHHHHHHHHHhcCCEEEEecCCCCCCcc------ccccC-C
Q 013019 283 -----ADMEGLEAALNNNN--VSLFFTESPTN-PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALSL-G 347 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~--tklV~lesPsN-PtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~------~pl~~-G 347 (451)
.|+++|+++|++++ .+++++.+|++ .+|.+.||++|+++||+||++++||++|+..... ..++. +
T Consensus 177 ~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~ 256 (450)
T 3bc8_A 177 GDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGR 256 (450)
T ss_dssp TTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSC
T ss_pred CccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccC
Confidence 37999999996521 34444545654 3568899999999999999999999999864221 22333 7
Q ss_pred CcEEEECCcccCCccccceeEEEEe-CHHHHHHHHHHhHhhCCCccHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHH
Q 013019 348 ADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAEIL 424 (451)
Q Consensus 348 aDiVv~S~SK~l~G~gdv~gG~Iv~-~~eli~~lr~~~~~~G~~ls~~~a~l~lr--gL~tl~~Rl~~~~~nA~~Lae~L 424 (451)
+|+++.|+||++..+- .++++.. ++++++++.......+...+.++.|..++ |.+.+...+++..++++.+.+.|
T Consensus 257 AD~~v~S~HK~l~a~~--~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l 334 (450)
T 3bc8_A 257 IDAFVQSLDKNFMVPV--GGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQL 334 (450)
T ss_dssp CCEEEEEHHHHHSCCS--SCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCccCCCchh--ccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998774 3666664 56666665443211122223345554433 44556666777788899999988
Q ss_pred HcCC
Q 013019 425 EAHP 428 (451)
Q Consensus 425 ~~~p 428 (451)
++.+
T Consensus 335 ~~~~ 338 (450)
T 3bc8_A 335 KKLA 338 (450)
T ss_dssp HHHH
T ss_pred HhhH
Confidence 7766
No 227
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.56 E-value=7.8e-14 Score=144.58 Aligned_cols=215 Identities=17% Similarity=0.128 Sum_probs=141.9
Q ss_pred CchhHHHHH----HHHHhhhCCCcE-----EEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHH--HH--hhhcCC
Q 013019 208 GNPTTVVVE----EKMSALEGAEST-----VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFI--ET--VLPKMG 274 (451)
Q Consensus 208 ~npt~~~Le----e~LA~l~gae~~-----vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l--~~--~l~~~G 274 (451)
|+...+.+| ++..+++|++.+ |=.-||+.|+.+++++|++|||+|+..+..+|+....- .. .....|
T Consensus 94 Gce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg 173 (490)
T 3ou5_A 94 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATS 173 (490)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------
T ss_pred CChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCccccccc
Confidence 555566554 456678898653 55679999999999999999999999999988843211 00 000111
Q ss_pred cEEEEe----C----CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCC-----CCCCcc
Q 013019 275 ITATVI----D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-----ATPLNQ 341 (451)
Q Consensus 275 i~v~~v----d----~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tf-----a~~~~~ 341 (451)
.-+..+ | ..|.|++++...+.++|+|++-. +-..+..|.+++.+||++.|++|++|-++ +.+..+
T Consensus 174 ~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~--SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~p 251 (490)
T 3ou5_A 174 IFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGT--SAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIP 251 (490)
T ss_dssp ------CBCEETTTTEECHHHHHHHHHHHCCSEEEECC--SSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSC
T ss_pred ccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECC--ccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccC
Confidence 111111 1 13889998888766789999843 34568889999999999999999999995 456778
Q ss_pred ccccCCCcEEEECCcccCCccccceeEEEEeCH---------------HHHHHHHHHhH--hhCCCccHHHHHHH---HH
Q 013019 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSG---------------KLVTQIRNLHH--VLGGALNPNAAYLI---IR 401 (451)
Q Consensus 342 ~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~---------------eli~~lr~~~~--~~G~~ls~~~a~l~---lr 401 (451)
+|+++ +|+|..|+||+|.|+. ||+|..++ ++.+++...-. ..|+...-..+..+ ..
T Consensus 252 sP~~~-ADvVTtTTHKTLrGPr---GG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~E 327 (490)
T 3ou5_A 252 SPFKH-ADIVTTTTHKTLRGAR---SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQ 327 (490)
T ss_dssp CGGGT-CSEEEEESSSTTCSCS---CEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHH
T ss_pred Ccccc-ceEEeccccccccCCC---ceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHH
Confidence 99987 9999999999999995 99999775 45666765432 22332222222221 22
Q ss_pred hh-HHHHHHHHHHHHHHHHHHHHHHcCC
Q 013019 402 GM-KTLHLRVQQQNSTALRMAEILEAHP 428 (451)
Q Consensus 402 gL-~tl~~Rl~~~~~nA~~Lae~L~~~p 428 (451)
.+ ..+....++..+||+.|++.|.++.
T Consensus 328 a~~p~fk~Ya~qVv~NAkaLA~~L~~~G 355 (490)
T 3ou5_A 328 ACTPMFREYSLQVLKNARAMADALLERG 355 (490)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 22 2455667888999999999999874
No 228
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.32 E-value=3.6e-16 Score=164.30 Aligned_cols=215 Identities=15% Similarity=0.128 Sum_probs=145.3
Q ss_pred CCCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcch-HHHHHHhhhcCCc--EEEE
Q 013019 206 RYGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKT-RIFIETVLPKMGI--TATV 279 (451)
Q Consensus 206 R~~npt~~~Lee~LA~l~-gae~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~t-~~~l~~~l~~~Gi--~v~~ 279 (451)
+|.++...+|+++|++++ +.+.+++++||++|+..++..+. ..+|+||+.+..|.+. ...+.. ....|+ .+..
T Consensus 136 ~~~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg-~~~~g~~~~~~~ 214 (465)
T 2yky_A 136 STQTENEALFAEAVCDRFPSIDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASG-HAPTNAPYHVVL 214 (465)
Confidence 457888899999999999 67888889999999999987642 3458999999999663 322200 012234 3334
Q ss_pred eCCCCHHHHHHhhcC--CCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCCCCccccc---cCC--C
Q 013019 280 IDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQKAL---SLG--A 348 (451)
Q Consensus 280 vd~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~~~~~~pl---~~G--a 348 (451)
++..|+++|++++++ .++++|++|...|++|.+.+ +++|.++|+++|++||+||++. ....... .+| .
T Consensus 215 ~~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~p 293 (465)
T 2yky_A 215 GVYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISA 293 (465)
Confidence 455688999999973 25899999887777997776 9999999999999999999988 4211111 113 3
Q ss_pred cEEEECCcccCCccccceeEEEEeCHHHHHHHHHH-----hHhhCCCccHHHHHHHHHhhHHHH--HHHHHHHHHHHHHH
Q 013019 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMA 421 (451)
Q Consensus 349 DiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~-----~~~~G~~ls~~~a~l~lrgL~tl~--~Rl~~~~~nA~~La 421 (451)
|+ .+++|++++ | ...|++++++++++.+... ........++..+..++..|+.+. ...++..+..+.+.
T Consensus 294 Di--~t~sK~lg~-G-~piG~v~~~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~ 369 (465)
T 2yky_A 294 DL--TTLGKYIGG-G-MSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFR 369 (465)
Confidence 54 479999997 4 5689999999998887651 111112345555554444444332 22344445555555
Q ss_pred HHHHc
Q 013019 422 EILEA 426 (451)
Q Consensus 422 e~L~~ 426 (451)
+.|++
T Consensus 370 ~~L~~ 374 (465)
T 2yky_A 370 ANLNR 374 (465)
Confidence 55543
No 229
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.42 E-value=1.4e-12 Score=133.54 Aligned_cols=208 Identities=13% Similarity=0.045 Sum_probs=140.0
Q ss_pred hHHHHHHHHHhhhCCC--cEEEe--CCHHHHHHHHHHHHccC--CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC--
Q 013019 211 TTVVVEEKMSALEGAE--STVIM--ASGMSASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (451)
Q Consensus 211 t~~~Lee~LA~l~gae--~~vv~--sSG~aAi~~al~all~~--GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-- 282 (451)
..++.++.|++++|++ ..++| ++|++++.+++..++.+ ||+|++....+.+. .++ ..+++.|..+.+++.
T Consensus 59 ~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~-~~~-~~a~~~G~~~~~~~~~~ 136 (377)
T 3e77_A 59 IINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSA-KAA-EEAKKFGTINIVHPKLG 136 (377)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHH-HHH-HHHTTTSEEEECSCCCS
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHH-HHH-HHHHHhCCceEEeccCC
Confidence 3566789999999974 34444 46779999999999876 99988766655543 233 456788887776543
Q ss_pred ---CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEECCccc
Q 013019 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKF 358 (451)
Q Consensus 283 ---~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S~SK~ 358 (451)
.++++++.++++ +|++|.+.+-.|.+|.+.|+ +|+++|+++++|.+.+.+. ..+.-++| +++.|.+|+
T Consensus 137 ~~~~~~~~~~~~i~~-~t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~~--~~~~s~~K~ 208 (377)
T 3e77_A 137 SYTKIPDPSTWNLNP-DASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSKFG--VIFAGAQKN 208 (377)
T ss_dssp SSCSCCCGGGCCCCT-TCSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGGCS--EEEEEGGGT
T ss_pred CcCCCCChHHhccCC-CccEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCchhhcC--EEEEecccc
Confidence 245666667776 49999988777788999998 4778999999999976542 22322444 688999999
Q ss_pred CCccccceeEEEEeCHHHHHHHH----------HHh--HhhCCCccHHHHHHHHHhhHH------HHHHHHHHHHHHHHH
Q 013019 359 IGGHNDVLAGSISGSGKLVTQIR----------NLH--HVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTALRM 420 (451)
Q Consensus 359 l~G~gdv~gG~Iv~~~eli~~lr----------~~~--~~~G~~ls~~~a~l~lrgL~t------l~~Rl~~~~~nA~~L 420 (451)
+|++| .|+++.++++++++. ... .....+++....+.+..+++. +..+.++..+.++.+
T Consensus 209 ~gp~G---~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l 285 (377)
T 3e77_A 209 VGSAG---VTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTI 285 (377)
T ss_dssp TSCTT---CEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred cCCCc---cEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 97666 677777665543221 110 011223444444444444443 344456667788888
Q ss_pred HHHHHcCCCeE
Q 013019 421 AEILEAHPKVL 431 (451)
Q Consensus 421 ae~L~~~p~V~ 431 (451)
.+.|++.|++.
T Consensus 286 ~~~L~~~~g~~ 296 (377)
T 3e77_A 286 YEIIDNSQGFY 296 (377)
T ss_dssp HHHHHTSTTSE
T ss_pred HHHHHhcCCce
Confidence 89999888764
No 230
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.38 E-value=4.3e-12 Score=132.89 Aligned_cols=205 Identities=13% Similarity=0.172 Sum_probs=124.2
Q ss_pred hHHHHHHHHHhhh--CCCcEEEeCCHHHHHHHHHHHHc-------c------------------CC---CeEEEcCCCCc
Q 013019 211 TTVVVEEKMSALE--GAESTVIMASGMSASTVMLLALV-------P------------------AG---GHIVTTTDCYR 260 (451)
Q Consensus 211 t~~~Lee~LA~l~--gae~~vv~sSG~aAi~~al~all-------~------------------~G---D~VIv~~~~Y~ 260 (451)
..+.|+++|+++. +.+.+++++||++|+..++..+. + +| ++||+.++.|.
T Consensus 111 l~~~la~~l~~~~~~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yH 190 (472)
T 1ohv_A 111 FVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFH 190 (472)
T ss_dssp HHHHHHHTGGGGCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCC
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcc
Confidence 3444455455555 45788899999999999997763 1 46 89999999987
Q ss_pred chHH-HHHHh----hhcCCcEE-----EEeC----C-------------CCHHHHHHhhcCC-----CeEEEEEeCCCCC
Q 013019 261 KTRI-FIETV----LPKMGITA-----TVID----P-------------ADMEGLEAALNNN-----NVSLFFTESPTNP 308 (451)
Q Consensus 261 ~t~~-~l~~~----l~~~Gi~v-----~~vd----~-------------~D~d~Le~ai~~~-----~tklV~lesPsNP 308 (451)
+... .+... ....+... ..++ . .|+++|++++++. ++++|++|..+|+
T Consensus 191 g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~ 270 (472)
T 1ohv_A 191 GRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSE 270 (472)
T ss_dssp CSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCT
T ss_pred cccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCC
Confidence 7332 22110 00112110 0111 0 1578899888751 4899999988889
Q ss_pred cccccc----HHHHHHHHHhcCCEEEEecCCCC-CCcc---ccccCC----CcEEEECCccc-CCccccceeEEEEeCHH
Q 013019 309 FLRCVD----VKLVSDLCHKKGAIVCIDGTFAT-PLNQ---KALSLG----ADLVLHSATKF-IGGHNDVLAGSISGSGK 375 (451)
Q Consensus 309 tG~v~D----L~~IaelA~~~g~~lVVD~tfa~-~~~~---~pl~~G----aDiVv~S~SK~-l~G~gdv~gG~Iv~~~e 375 (451)
+|.+.+ +++|.++|++||++||+|+++.. +... ....+| .|++ +++|. ++ ||+++ +++
T Consensus 271 ~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~--t~sK~~l~------GG~~~-~~~ 341 (472)
T 1ohv_A 271 GGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVM--TFSKKMMT------GGFFH-KEE 341 (472)
T ss_dssp TTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEE--EECGGGSS------EEEEE-CGG
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEE--EEcccccc------CCccC-chh
Confidence 998877 99999999999999999999752 1111 111234 5765 67798 44 36666 555
Q ss_pred HHHHHHHHhHhhCC-CccHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc
Q 013019 376 LVTQIRNLHHVLGG-ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEA 426 (451)
Q Consensus 376 li~~lr~~~~~~G~-~ls~~~a~l~lrgL~tl~~--Rl~~~~~nA~~Lae~L~~ 426 (451)
+. .+.... ..+. ..++..+..++..|+.+.. ..++..+..+.+.+.|++
T Consensus 342 ~~-~~~~~~-~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 393 (472)
T 1ohv_A 342 FR-PNAPYR-IFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLD 393 (472)
T ss_dssp GS-CSSSSS-SCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred hc-cccccc-ccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 42 111111 1121 3466666555555554322 244555566666666654
No 231
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.30 E-value=6.6e-12 Score=128.84 Aligned_cols=155 Identities=14% Similarity=0.025 Sum_probs=111.1
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEe--CCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCC-
Q 013019 209 NPTTVVVEEKMSALEGAE--STVIM--ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae--~~vv~--sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~- 283 (451)
....++.++.|++++|++ ..++| ++|++++.+++..++++||+|++....+.+.. +. ..+++.| ++++++.+
T Consensus 71 ~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~-~~-~~a~~~G-~v~~v~~~~ 147 (386)
T 3qm2_A 71 IQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAAS-AI-KEAKKYC-APQIIDAKI 147 (386)
T ss_dssp --CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHH-HH-HHHTTTS-EEEEEECEE
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHHH-HH-HHHHHhC-CeEEEecCc
Confidence 345677899999999984 33444 58889999999999999999875544444432 22 3456778 77766432
Q ss_pred -------CHHHHHHhhcCCCeEEEEEeCCCCCcccc-ccHHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEEC
Q 013019 284 -------DMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (451)
Q Consensus 284 -------D~d~Le~ai~~~~tklV~lesPsNPtG~v-~DL~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~S 354 (451)
++++++.+++++ |++|.+.+-.|.+|.+ .|+++|. +|+++++|.+.+.+. ..+.-++ |+++.|
T Consensus 148 ~~~G~~~~~~~~~~~l~~~-t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~--~~~~~s 219 (386)
T 3qm2_A 148 TVDGKRAVKPMREWQLSDN-AAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRY--GVIYAG 219 (386)
T ss_dssp EETTEEEECCGGGCCCCTT-CSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGC--SEEEEE
T ss_pred ccCCCCCCchHHHhhcCCC-CcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCcccc--CEEEEe
Confidence 456777788774 9999887767778996 8888885 799999999976542 2222244 467899
Q ss_pred CcccCCccccceeEEEEeCHHHH
Q 013019 355 ATKFIGGHNDVLAGSISGSGKLV 377 (451)
Q Consensus 355 ~SK~l~G~gdv~gG~Iv~~~eli 377 (451)
.+|++|..| .|+++.+++++
T Consensus 220 ~hK~lGP~G---~g~l~v~~~~~ 239 (386)
T 3qm2_A 220 AQKNIGPAG---LTLVIVREDLL 239 (386)
T ss_dssp TTTTTCCTT---EEEEEEEGGGC
T ss_pred cccccCCCc---cEEEEECHHHH
Confidence 999997655 78888777654
No 232
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.30 E-value=1.8e-11 Score=124.54 Aligned_cols=203 Identities=12% Similarity=0.072 Sum_probs=131.4
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEe--CCHHHHHHHHHHHHccCCCeEE-EcCCCCcchHHHHHHhhhcCCcEEEEeCC--
Q 013019 210 PTTVVVEEKMSALEGAE--STVIM--ASGMSASTVMLLALVPAGGHIV-TTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (451)
Q Consensus 210 pt~~~Lee~LA~l~gae--~~vv~--sSG~aAi~~al~all~~GD~VI-v~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-- 282 (451)
...++.++.|++++|++ ..++| ++|++++.+++..++ +||+++ +....| +. .+. ..+++.|+++++++.
T Consensus 50 ~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~-~~-~~~-~~a~~~G~~v~~~~~~~ 125 (361)
T 3m5u_A 50 EVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVW-TK-KAI-KEAQILGVNVKTVASSE 125 (361)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHH-HH-HHH-HHHHHTTCCEEEEEECT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHH-HH-HHH-HHHHHcCCceEEEeccc
Confidence 34566789999999983 34444 566699999999998 888652 222233 22 222 345667888877642
Q ss_pred -----CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEECCcc
Q 013019 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATK 357 (451)
Q Consensus 283 -----~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S~SK 357 (451)
.+++. + |++ +|++|.+.+..|.+|.+.|. +++ +|+++++|.+.+.+...-.++ ..|+++.|.+|
T Consensus 126 ~g~~~~~~~~--~-l~~-~t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~~-~~d~~~~s~~K 194 (361)
T 3m5u_A 126 ESNFDHIPRV--E-FSD-NADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDFS-NIALFYGGVQK 194 (361)
T ss_dssp TTTSCSCCCC--C-CCT-TSSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCCT-TEEEEEEETTT
T ss_pred CcCCCcCChh--h-cCC-CCCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCcc-cCCEEEEechh
Confidence 23444 3 776 49999998777788998662 344 499999999976542211112 36899999999
Q ss_pred cCCccccceeEEEEeCHHHHHHHHH--------HhH-----hhCCCccHHHHHHHHHhhHH------HHHHHHHHHHHHH
Q 013019 358 FIGGHNDVLAGSISGSGKLVTQIRN--------LHH-----VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (451)
Q Consensus 358 ~l~G~gdv~gG~Iv~~~eli~~lr~--------~~~-----~~G~~ls~~~a~l~lrgL~t------l~~Rl~~~~~nA~ 418 (451)
++|.+| .|+++.++++++++.. +.. ....+.+....+.+..+++. +..+.++..+.++
T Consensus 195 ~~gp~G---~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~ 271 (361)
T 3m5u_A 195 NAGISG---LSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKAT 271 (361)
T ss_dssp TSSCTT---CEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred ccCCCc---cEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 997665 7888889888877653 000 01123343344444444443 3344556667788
Q ss_pred HHHHHHHcCCCe
Q 013019 419 RMAEILEAHPKV 430 (451)
Q Consensus 419 ~Lae~L~~~p~V 430 (451)
.+.+.|++.+++
T Consensus 272 ~l~~~L~~~~g~ 283 (361)
T 3m5u_A 272 MLYECIDLSNGF 283 (361)
T ss_dssp HHHHHHHTSTTS
T ss_pred HHHHHHHHCCCe
Confidence 888899988866
No 233
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.29 E-value=3.3e-11 Score=126.14 Aligned_cols=224 Identities=14% Similarity=0.116 Sum_probs=146.2
Q ss_pred CchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHHcc--CCCeEEEcCCCCcchHHHHHHh--hhcCCcEEEEeCC
Q 013019 208 GNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV--LPKMGITATVIDP 282 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~ga-e~~vv~sSG~aAi~~al~all~--~GD~VIv~~~~Y~~t~~~l~~~--l~~~Gi~v~~vd~ 282 (451)
.++...+|+++|+++... +.+.+++||++|+..++..... ..++||..+.+|.+........ .......+..++.
T Consensus 125 ~~~~~~~lae~l~~~~p~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~ 204 (454)
T 4ao9_A 125 HNLLEGRLARLICERFPQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY 204 (454)
T ss_dssp EESSHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT
T ss_pred CcHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC
Confidence 356677899999998854 6777789999999999876532 3467888888887632110000 0112334556677
Q ss_pred CCHHHHHHhhcCC--CeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEEEecCCCC----CCccccccCCCcEEE
Q 013019 283 ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----PLNQKALSLGADLVL 352 (451)
Q Consensus 283 ~D~d~Le~ai~~~--~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~----~~~~~pl~~GaDiVv 352 (451)
.|++.+++.++++ ++.+|++|...+..|.+.+ |++|.++|++||++||+||++.. ...+.-...-.|+++
T Consensus 205 nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~~~a~e~~gv~PDi~t 284 (454)
T 4ao9_A 205 NDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTSRLAPHGLANKLGIRSDLTT 284 (454)
T ss_dssp TCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGGGGSTTCHHHHHTCCCSEEE
T ss_pred chHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcCCCccccchhccCCCCcEEE
Confidence 8999999988642 4899999988777787765 99999999999999999998742 111222223358876
Q ss_pred ECCcccCCccccceeEEEEeCHHHHHHHHHHh--HhhCC--CccHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHH-
Q 013019 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGG--ALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAEILE- 425 (451)
Q Consensus 353 ~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~--~~~G~--~ls~~~a~l~lrgL~tl--~~Rl~~~~~nA~~Lae~L~- 425 (451)
+.|.++|. ...|++.+++++++.+.... ...+. ..+|..+...+..|+.+ +...++..++.++|.+.|+
T Consensus 285 --~gK~lggG--~Piga~~~~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~ 360 (454)
T 4ao9_A 285 --LGKYIGGG--MSFGAFGGRADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNA 360 (454)
T ss_dssp --EEGGGGTT--SSCEEEEECHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred --eccccCCC--CcceeeeeHHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHH
Confidence 78999865 35788899998887664311 11222 23577666555555544 2234555555666665554
Q ss_pred ---cCCCeEEEec
Q 013019 426 ---AHPKVLLLFI 435 (451)
Q Consensus 426 ---~~p~V~~V~y 435 (451)
+++.+..|+.
T Consensus 361 l~~~~~~~~~vrg 373 (454)
T 4ao9_A 361 LCANEGVAMQFTG 373 (454)
T ss_dssp HHHHHTBSCEEEE
T ss_pred HHhhCCCCEEEee
Confidence 4555544443
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.11 E-value=6.4e-09 Score=108.83 Aligned_cols=227 Identities=15% Similarity=0.098 Sum_probs=134.8
Q ss_pred CchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHc--cCCCeEEEcCCCCcc-hHHHHHHhh---------hc
Q 013019 208 GNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRK-TRIFIETVL---------PK 272 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~ga---e~~vv~sSG~aAi~~al~all--~~GD~VIv~~~~Y~~-t~~~l~~~l---------~~ 272 (451)
.++...+|.++|.++... +.+++++||++|+..++.... ....+|+..+..|.+ +...+.... ..
T Consensus 105 ~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p 184 (456)
T 4atq_A 105 PYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGP 184 (456)
T ss_dssp CCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCS
T ss_pred CcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCC
Confidence 455666788999998753 457778999999999886432 234678888888876 332222110 01
Q ss_pred CCcEEEEeCC-----------CCHHH-------HHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCEEE
Q 013019 273 MGITATVIDP-----------ADMEG-------LEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVC 330 (451)
Q Consensus 273 ~Gi~v~~vd~-----------~D~d~-------Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~lV 330 (451)
+...+..++. .+.+. +++.+..+++.+|++|....-.|.+.+ +++|.++|++||+++|
T Consensus 185 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI 264 (456)
T 4atq_A 185 FAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFI 264 (456)
T ss_dssp CCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEE
T ss_pred ccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceE
Confidence 1122333332 12222 333333345899999987766666543 8999999999999999
Q ss_pred EecCCCC----C--CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHhhCCCccHHHHHHHHHhhH
Q 013019 331 IDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (451)
Q Consensus 331 VD~tfa~----~--~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~~G~~ls~~~a~l~lrgL~ 404 (451)
+||++.. + +.++....-.||++ +.|.++|. ...|.+++++++.+.+..........-+|..+..++..|+
T Consensus 265 ~DEV~tG~GRtG~~~a~e~~gv~PDivt--~gK~lggg--~P~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~ 340 (456)
T 4atq_A 265 ADEVQSGFCRTGEWFAVDHEGVVPDIIT--MAKGIAGG--LPLSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAID 340 (456)
T ss_dssp EECTTTTTTTTSSSSGGGGTTCCCSEEE--ECGGGGTT--SSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred ecccccccCCccccccccccCCCCchhh--hhhcccCc--CCceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHHH
Confidence 9998543 1 22332333469887 56888754 3577888888887765433221112346777776666666
Q ss_pred HHHHH--HHHHHHHHHHHHHHHH----c-----CCCeEEEecCCC
Q 013019 405 TLHLR--VQQQNSTALRMAEILE----A-----HPKVLLLFITLL 438 (451)
Q Consensus 405 tl~~R--l~~~~~nA~~Lae~L~----~-----~p~V~~V~yPgL 438 (451)
.+... +++..+..+.+.+.|+ + +|.|..|+.-||
T Consensus 341 ~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl 385 (456)
T 4atq_A 341 TMEQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGA 385 (456)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETT
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecce
Confidence 55421 2333333333333333 2 466777765443
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.07 E-value=2.4e-08 Score=105.04 Aligned_cols=228 Identities=14% Similarity=0.123 Sum_probs=141.0
Q ss_pred CchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc-------cCC-CeEEEcCCCCcc-hHHHHHHh----hhc
Q 013019 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRK-TRIFIETV----LPK 272 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~ga--e~~vv~sSG~aAi~~al~all-------~~G-D~VIv~~~~Y~~-t~~~l~~~----l~~ 272 (451)
.++...+|.++|.++.+. +.+.+++||++|+..++.... +++ .+||.....|.+ |...+... ...
T Consensus 109 ~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~ 188 (473)
T 4e3q_A 109 MSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSV 188 (473)
T ss_dssp EEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGG
T ss_pred cCHHHHHHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccc
Confidence 356667788999998853 578888999999999987543 122 468888878766 33222111 011
Q ss_pred CC---cEEEEeCCC----------C--------HHHHHHhhc---CCCeEEEEEeCCCCCcccccc----HHHHHHHHHh
Q 013019 273 MG---ITATVIDPA----------D--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (451)
Q Consensus 273 ~G---i~v~~vd~~----------D--------~d~Le~ai~---~~~tklV~lesPsNPtG~v~D----L~~IaelA~~ 324 (451)
++ .....++.. . .+++++.+. .+++.+|++|....-.|.+.+ +++|.++|++
T Consensus 189 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~ 268 (473)
T 4e3q_A 189 FGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRK 268 (473)
T ss_dssp GTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHH
T ss_pred cCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcc
Confidence 11 112222211 0 234444443 224889999987766665543 8999999999
Q ss_pred cCCEEEEecCCCCC------CccccccCCCcEEEECCcccCCccccceeEEEEeCHHHHHHHHHHhHh-----hCC--Cc
Q 013019 325 KGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV-----LGG--AL 391 (451)
Q Consensus 325 ~g~~lVVD~tfa~~------~~~~pl~~GaDiVv~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~~~-----~G~--~l 391 (451)
+|++||+||++... +.+.-...-.||++ +.|.++|.. ...|.+++++++.+.+...... .|. .-
T Consensus 269 ~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t--~~K~l~gG~-~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~G 345 (473)
T 4e3q_A 269 YDIPVISDEVICGFGRTGNTWGCVTYDFTPDAII--SSKNLTAGF-FPMGAVILGPELSKRLETAIEAIEEFPHGFTASG 345 (473)
T ss_dssp TTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEE--ECGGGGTTS-SCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTT
T ss_pred cceEEeccCccccCCcccchhHHHhcCCCCChHH--hcccccCCC-CCcccccccHHHHHHhccccccccccccCCCCCC
Confidence 99999999995431 22222233468887 689997653 3578888999998887653221 122 23
Q ss_pred cHHHHHHHHHhhHHHHHH--HHHHHHHHHHHHHHH---HcCCCeEEEecCCC
Q 013019 392 NPNAAYLIIRGMKTLHLR--VQQQNSTALRMAEIL---EAHPKVLLLFITLL 438 (451)
Q Consensus 392 s~~~a~l~lrgL~tl~~R--l~~~~~nA~~Lae~L---~~~p~V~~V~yPgL 438 (451)
+|..+..++..|+.+... +++..+...+|.+.| .++|.|..|+.-||
T Consensus 346 npla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG~Gl 397 (473)
T 4e3q_A 346 HPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGF 397 (473)
T ss_dssp CHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETT
T ss_pred CcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHhcCCCeeEEeecce
Confidence 677777766666655432 334444444454444 46788888775554
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.87 E-value=1.1e-08 Score=114.58 Aligned_cols=227 Identities=12% Similarity=0.089 Sum_probs=139.6
Q ss_pred CCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHc-----cCC------------CeEEEcCCCCcc-hHHH
Q 013019 207 YGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV-----PAG------------GHIVTTTDCYRK-TRIF 265 (451)
Q Consensus 207 ~~npt~~~Lee~LA~l~g---ae~~vv~sSG~aAi~~al~all-----~~G------------D~VIv~~~~Y~~-t~~~ 265 (451)
+.++...+|.++|+++.+ .+.+++++||++|+..++...+ +.| .+||..+..|.+ |...
T Consensus 421 ~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~ga 500 (831)
T 4a0g_A 421 NVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGA 500 (831)
T ss_dssp EECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHH
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceee
Confidence 346777899999999987 3578888999999998887542 122 268887777755 4443
Q ss_pred HHHhh----hc------C-CcEE-------------EEeCC--------------CC------------------HHHHH
Q 013019 266 IETVL----PK------M-GITA-------------TVIDP--------------AD------------------MEGLE 289 (451)
Q Consensus 266 l~~~l----~~------~-Gi~v-------------~~vd~--------------~D------------------~d~Le 289 (451)
+...- .. . +... ..++. .+ .+.|+
T Consensus 501 ls~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 580 (831)
T 4a0g_A 501 MEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLS 580 (831)
T ss_dssp HHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHH
T ss_pred eeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHH
Confidence 32110 00 0 1000 01100 11 25677
Q ss_pred Hhhc-------CCCeEEEEEeCC-CCCcccccc----HHHHHHHHHhcCCEEEEecCCCC----C--CccccccCCCcEE
Q 013019 290 AALN-------NNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----P--LNQKALSLGADLV 351 (451)
Q Consensus 290 ~ai~-------~~~tklV~lesP-sNPtG~v~D----L~~IaelA~~~g~~lVVD~tfa~----~--~~~~pl~~GaDiV 351 (451)
+.|+ ..++.+|++|.. .+..|.+.. +++|.++|++||++||+||++.. + +.......-.|++
T Consensus 581 ~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDii 660 (831)
T 4a0g_A 581 KHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIA 660 (831)
T ss_dssp HHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEE
T ss_pred HHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEE
Confidence 7775 235889999976 677776654 89999999999999999998642 1 1111122235777
Q ss_pred EECCcccCCccccceeEEEEeCHHHHHHHHHHh------HhhCCCccHHHHHHHHHhhHHHHHH--HHHHHHH-------
Q 013019 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH------HVLGGALNPNAAYLIIRGMKTLHLR--VQQQNST------- 416 (451)
Q Consensus 352 v~S~SK~l~G~gdv~gG~Iv~~~eli~~lr~~~------~~~G~~ls~~~a~l~lrgL~tl~~R--l~~~~~n------- 416 (451)
+ ++|.++| |-+..|++++++++++.+.... .......+|..+..++..|+.+... .++..++
T Consensus 661 t--lsK~L~g-G~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~ 737 (831)
T 4a0g_A 661 C--FAKLLTG-GMVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLREL 737 (831)
T ss_dssp E--ECGGGGT-TSSCCEEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCC
T ss_pred E--Eeccccc-CccCcEEEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 5 8899987 3245789999999888765321 1112335778777777666655321 1111111
Q ss_pred -HHHHHHHHHcCCCeEEEecC
Q 013019 417 -ALRMAEILEAHPKVLLLFIT 436 (451)
Q Consensus 417 -A~~Lae~L~~~p~V~~V~yP 436 (451)
.+.+.+.|.++|.|..|+.-
T Consensus 738 l~~~l~~~l~~~~~v~~vrg~ 758 (831)
T 4a0g_A 738 WDEELVQQISSHSAVQRVVVI 758 (831)
T ss_dssp SCHHHHHHHHHSTTEEEEEEE
T ss_pred HHHHHHHHHhhCCCceeEeec
Confidence 12355667788988887643
No 237
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=68.10 E-value=57 Score=29.46 Aligned_cols=119 Identities=10% Similarity=0.175 Sum_probs=70.0
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE---EEEeCC
Q 013019 209 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT---ATVIDP 282 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae---~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~---v~~vd~ 282 (451)
.|....+-..++...+.. ..+=+++|+......+...++++.+|+..+..-. .....+..++..|+. ++++..
T Consensus 38 ~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~g~~~~~i~~~~g 116 (221)
T 3dr5_A 38 DEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESE-HQRQAKALFREAGYSPSRVRFLLS 116 (221)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHH-HHHHHHHHHHHTTCCGGGEEEECS
T ss_pred CHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCcCcEEEEEc
Confidence 577777777788877765 6777888886665555555666778887765432 333444445555554 665543
Q ss_pred CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHh---cCCEEEEecCC
Q 013019 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIVCIDGTF 335 (451)
Q Consensus 283 ~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~---~g~~lVVD~tf 335 (451)
|..++...+.+..-.+||+..+. .+...+.+.+.+ .|.++++|++.
T Consensus 117 -da~~~l~~~~~~~fD~V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 117 -RPLDVMSRLANDSYQLVFGQVSP------MDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp -CHHHHGGGSCTTCEEEEEECCCT------TTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred -CHHHHHHHhcCCCcCeEEEcCcH------HHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 44444333422347899885432 223333333332 46788888885
No 238
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=67.48 E-value=40 Score=26.18 Aligned_cols=90 Identities=16% Similarity=0.251 Sum_probs=55.7
Q ss_pred cEEEeCCHHHHHHHHHHHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCC
Q 013019 227 STVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (451)
Q Consensus 227 ~~vv~sSG~aAi~~al~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesP 305 (451)
..++++.|..+... +..+.+.| .+|++.+.. ..-.+. +...++.....|..+.+.+++.+.. ..+|+.+.|
T Consensus 7 ~v~I~G~G~iG~~~-~~~l~~~g~~~v~~~~r~----~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~~~ 78 (118)
T 3ic5_A 7 NICVVGAGKIGQMI-AALLKTSSNYSVTVADHD----LAALAV-LNRMGVATKQVDAKDEAGLAKALGG--FDAVISAAP 78 (118)
T ss_dssp EEEEECCSHHHHHH-HHHHHHCSSEEEEEEESC----HHHHHH-HHTTTCEEEECCTTCHHHHHHHTTT--CSEEEECSC
T ss_pred eEEEECCCHHHHHH-HHHHHhCCCceEEEEeCC----HHHHHH-HHhCCCcEEEecCCCHHHHHHHHcC--CCEEEECCC
Confidence 45666666644433 34456667 566664432 122222 2245777777888888999988864 678887665
Q ss_pred CCCccccccHHHHHHHHHhcCCEEE
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIVC 330 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~lV 330 (451)
.. ....+.+.|.+.|+..+
T Consensus 79 ~~------~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 79 FF------LTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp GG------GHHHHHHHHHHTTCEEE
T ss_pred ch------hhHHHHHHHHHhCCCEE
Confidence 32 23678888888888754
No 239
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=59.10 E-value=79 Score=29.89 Aligned_cols=99 Identities=12% Similarity=0.090 Sum_probs=52.9
Q ss_pred CcEEEeC-CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhc------CCcEEEEeCCCCHHHHHHhhcCCCeE
Q 013019 226 ESTVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK------MGITATVIDPADMEGLEAALNNNNVS 298 (451)
Q Consensus 226 e~~vv~s-SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~------~Gi~v~~vd~~D~d~Le~ai~~~~tk 298 (451)
...++++ +|.-+- .++..|++.|.+|++....-......+...... -++++...|..|.+.++++++. +.
T Consensus 26 ~~vlVtGatG~iG~-~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d 102 (351)
T 3ruf_A 26 KTWLITGVAGFIGS-NLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG--VD 102 (351)
T ss_dssp CEEEEETTTSHHHH-HHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT--CS
T ss_pred CeEEEECCCcHHHH-HHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC--CC
Confidence 3445544 344332 334556778888777543322222222222111 4677777888899999999874 55
Q ss_pred EEEEeCC-CCCcccccc-----------HHHHHHHHHhcCC
Q 013019 299 LFFTESP-TNPFLRCVD-----------VKLVSDLCHKKGA 327 (451)
Q Consensus 299 lV~lesP-sNPtG~v~D-----------L~~IaelA~~~g~ 327 (451)
.|+-... .++.....+ ...|.+.|++.++
T Consensus 103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5554332 211111111 2457888888875
No 240
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=59.04 E-value=61 Score=27.87 Aligned_cols=40 Identities=8% Similarity=0.060 Sum_probs=26.0
Q ss_pred ccccccHHHHHHHHHhcCCEE--EEecCCCCCCccccccCCCcEEEEC
Q 013019 309 FLRCVDVKLVSDLCHKKGAIV--CIDGTFATPLNQKALSLGADLVLHS 354 (451)
Q Consensus 309 tG~v~DL~~IaelA~~~g~~l--VVD~tfa~~~~~~pl~~GaDiVv~S 354 (451)
.|...++-++++.|+++|+.+ |.|+. ..++..-+|+++.-
T Consensus 106 sG~t~~~~~~~~~ak~~g~~vi~IT~~~------~s~la~~ad~~l~~ 147 (183)
T 2xhz_A 106 SGESSEITALIPVLKRLHVPLICITGRP------ESSMARAADVHLCV 147 (183)
T ss_dssp SSCCHHHHHHHHHHHTTTCCEEEEESCT------TSHHHHHSSEEEEC
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCC------CChhHHhCCEEEEe
Confidence 477778889999999998654 33432 23444347777654
No 241
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=58.51 E-value=88 Score=27.59 Aligned_cols=122 Identities=11% Similarity=0.059 Sum_probs=60.5
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc--EEEEeCCCCHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi--~v~~vd~~D~d 286 (451)
++....+-..+..+.+....+=+++|+......+...++++.+|+..+..-. .....+..+...|+ .++++.. |..
T Consensus 54 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~g~~~~i~~~~~-d~~ 131 (229)
T 2avd_A 54 TCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQ-PPELGRPLWRQAEAEHKIDLRLK-PAL 131 (229)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSH-HHHHHHHHHHHTTCTTTEEEEES-CHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHCCCCCeEEEEEc-CHH
Confidence 4555555566666666677777888875544444333444667777664332 23333344444443 3444432 333
Q ss_pred -HHHHhhcC---CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 287 -GLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 287 -~Le~ai~~---~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
.+.....+ ....+|++..+. .....-++.+.++.+ .|..+++|+++
T Consensus 132 ~~~~~~~~~~~~~~~D~v~~d~~~--~~~~~~l~~~~~~L~-pgG~lv~~~~~ 181 (229)
T 2avd_A 132 ETLDELLAAGEAGTFDVAVVDADK--ENCSAYYERCLQLLR-PGGILAVLRVL 181 (229)
T ss_dssp HHHHHHHHTTCTTCEEEEEECSCS--TTHHHHHHHHHHHEE-EEEEEEEECCS
T ss_pred HHHHHHHhcCCCCCccEEEECCCH--HHHHHHHHHHHHHcC-CCeEEEEECCC
Confidence 33332211 247888885431 001111333333333 35567777764
No 242
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=57.66 E-value=56 Score=30.87 Aligned_cols=88 Identities=13% Similarity=0.154 Sum_probs=53.6
Q ss_pred CCcEEEEeCCC--CHHHHHHhhc----CCCeEEEEEe----CCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCc--
Q 013019 273 MGITATVIDPA--DMEGLEAALN----NNNVSLFFTE----SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-- 340 (451)
Q Consensus 273 ~Gi~v~~vd~~--D~d~Le~ai~----~~~tklV~le----sPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-- 340 (451)
.|.++.+-... +++++..+++ ..+..+++++ +..|..-...||..+..+.+..+.+||+|.+++.+..
T Consensus 129 ~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~~~~ 208 (262)
T 1zco_A 129 VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGRRSL 208 (262)
T ss_dssp SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCSGGG
T ss_pred cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCccch
Confidence 56665544332 4666655552 2234677776 4335555667888988887777999999999886641
Q ss_pred -----cccccCCCc-EEEE---CCcccCC
Q 013019 341 -----QKALSLGAD-LVLH---SATKFIG 360 (451)
Q Consensus 341 -----~~pl~~GaD-iVv~---S~SK~l~ 360 (451)
.....+|+| +++. ...|.+.
T Consensus 209 v~~~~~aAva~Ga~Gl~iE~H~~~d~al~ 237 (262)
T 1zco_A 209 VIPLAKAAYAIGADGIMVEVHPEPEKALS 237 (262)
T ss_dssp HHHHHHHHHHTTCSEEEEEBCSSGGGCSS
T ss_pred HHHHHHHHHHcCCCEEEEEecCCccccCC
Confidence 223456887 3333 2445554
No 243
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=56.86 E-value=33 Score=29.69 Aligned_cols=88 Identities=13% Similarity=0.075 Sum_probs=52.2
Q ss_pred CcEEEeCCHHHHHHHHHHHHccC-CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHh--hcCCCeEEEEE
Q 013019 226 ESTVIMASGMSASTVMLLALVPA-GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAA--LNNNNVSLFFT 302 (451)
Q Consensus 226 e~~vv~sSG~aAi~~al~all~~-GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~a--i~~~~tklV~l 302 (451)
...++++.|..+...+ ..|.+. |-+|++.+.. ....+. +...|+.+...|..+.+.++++ +.+ .++|++
T Consensus 40 ~~v~IiG~G~~G~~~a-~~L~~~~g~~V~vid~~----~~~~~~-~~~~g~~~~~gd~~~~~~l~~~~~~~~--ad~vi~ 111 (183)
T 3c85_A 40 AQVLILGMGRIGTGAY-DELRARYGKISLGIEIR----EEAAQQ-HRSEGRNVISGDATDPDFWERILDTGH--VKLVLL 111 (183)
T ss_dssp CSEEEECCSHHHHHHH-HHHHHHHCSCEEEEESC----HHHHHH-HHHTTCCEEECCTTCHHHHHTBCSCCC--CCEEEE
T ss_pred CcEEEECCCHHHHHHH-HHHHhccCCeEEEEECC----HHHHHH-HHHCCCCEEEcCCCCHHHHHhccCCCC--CCEEEE
Confidence 4688888888665444 345555 7666665432 222222 3445777766687788878776 443 678888
Q ss_pred eCCCCCccccccHHHHHHHHHhcC
Q 013019 303 ESPTNPFLRCVDVKLVSDLCHKKG 326 (451)
Q Consensus 303 esPsNPtG~v~DL~~IaelA~~~g 326 (451)
.+|+. .....+...+++.+
T Consensus 112 ~~~~~-----~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 112 AMPHH-----QGNQTALEQLQRRN 130 (183)
T ss_dssp CCSSH-----HHHHHHHHHHHHTT
T ss_pred eCCCh-----HHHHHHHHHHHHHC
Confidence 66641 12334556677654
No 244
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=56.40 E-value=75 Score=25.38 Aligned_cols=89 Identities=16% Similarity=0.105 Sum_probs=49.6
Q ss_pred cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCC
Q 013019 227 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (451)
Q Consensus 227 ~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPs 306 (451)
..++++.|.-+...+ ..|.+.|.+|++.+.. ...++......++.+...|..+.+.++++.-+ +.++|++++|.
T Consensus 6 ~i~IiG~G~iG~~~a-~~L~~~g~~v~~~d~~----~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-~~d~vi~~~~~ 79 (140)
T 1lss_A 6 YIIIAGIGRVGYTLA-KSLSEKGHDIVLIDID----KDICKKASAEIDALVINGDCTKIKTLEDAGIE-DADMYIAVTGK 79 (140)
T ss_dssp EEEEECCSHHHHHHH-HHHHHTTCEEEEEESC----HHHHHHHHHHCSSEEEESCTTSHHHHHHTTTT-TCSEEEECCSC
T ss_pred EEEEECCCHHHHHHH-HHHHhCCCeEEEEECC----HHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcc-cCCEEEEeeCC
Confidence 466777777555433 3455677777665432 22232333344776655566677777655223 36788887665
Q ss_pred CCccccccHHHHHHHHHhcC
Q 013019 307 NPFLRCVDVKLVSDLCHKKG 326 (451)
Q Consensus 307 NPtG~v~DL~~IaelA~~~g 326 (451)
. ..-..+.+++++.+
T Consensus 80 ~-----~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 80 E-----EVNLMSSLLAKSYG 94 (140)
T ss_dssp H-----HHHHHHHHHHHHTT
T ss_pred c-----hHHHHHHHHHHHcC
Confidence 2 11124556666655
No 245
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=55.62 E-value=78 Score=25.76 Aligned_cols=89 Identities=16% Similarity=0.149 Sum_probs=52.3
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCC
Q 013019 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (451)
Q Consensus 226 e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesP 305 (451)
...++++.|.-+... ...|.+.|-+|++.+.. ...++. +...|+.+...|..|.+.++++--+ +.++|++..|
T Consensus 7 ~~v~I~G~G~iG~~l-a~~L~~~g~~V~~id~~----~~~~~~-~~~~~~~~~~gd~~~~~~l~~~~~~-~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEAAGVGL-VRELTAAGKKVLAVDKS----KEKIEL-LEDEGFDAVIADPTDESFYRSLDLE-GVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSHHHHHH-HHHHHHTTCCEEEEESC----HHHHHH-HHHTTCEEEECCTTCHHHHHHSCCT-TCSEEEECCS
T ss_pred CEEEEECCCHHHHHH-HHHHHHCCCeEEEEECC----HHHHHH-HHHCCCcEEECCCCCHHHHHhCCcc-cCCEEEEecC
Confidence 467888888754433 34456678777765532 222222 2335777777788888888876323 3678887665
Q ss_pred CCCccccccHHHHHHHHHhcC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKG 326 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g 326 (451)
+ . ..-..+...+++.+
T Consensus 80 ~-~----~~n~~~~~~a~~~~ 95 (141)
T 3llv_A 80 D-D----EFNLKILKALRSVS 95 (141)
T ss_dssp C-H----HHHHHHHHHHHHHC
T ss_pred C-H----HHHHHHHHHHHHhC
Confidence 3 1 11234556666654
No 246
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=55.43 E-value=53 Score=31.32 Aligned_cols=105 Identities=11% Similarity=0.087 Sum_probs=58.8
Q ss_pred cEEEeC-CHHHHHHHHHHHHccCCCeEEEcCCCC---cchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEE
Q 013019 227 STVIMA-SGMSASTVMLLALVPAGGHIVTTTDCY---RKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFT 302 (451)
Q Consensus 227 ~~vv~s-SG~aAi~~al~all~~GD~VIv~~~~Y---~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~l 302 (451)
..++++ +|.-+- .++..|++.|.+|++....- ......+. .+...++++...|..|.+.+++++++.++..|+.
T Consensus 12 ~IlVtGatG~iG~-~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~-~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 12 RVLIAGATGFIGQ-FVATASLDAHRPTYILARPGPRSPSKAKIFK-ALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp CEEEECTTSHHHH-HHHHHHHHTTCCEEEEECSSCCCHHHHHHHH-HHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred eEEEECCCcHHHH-HHHHHHHHCCCCEEEEECCCCCChhHHHHHH-HHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 345554 244332 33445666776665543221 11111121 2344588888889999999999997322556655
Q ss_pred eCCCCCccccccHHHHHHHHHhcC-CEEEEecCCC
Q 013019 303 ESPTNPFLRCVDVKLVSDLCHKKG-AIVCIDGTFA 336 (451)
Q Consensus 303 esPsNPtG~v~DL~~IaelA~~~g-~~lVVD~tfa 336 (451)
.... ..+.....|.+.|++.| +..++=..|+
T Consensus 90 ~a~~---~n~~~~~~l~~aa~~~g~v~~~v~S~~g 121 (346)
T 3i6i_A 90 TVGG---ESILDQIALVKAMKAVGTIKRFLPSEFG 121 (346)
T ss_dssp CCCG---GGGGGHHHHHHHHHHHCCCSEEECSCCS
T ss_pred CCch---hhHHHHHHHHHHHHHcCCceEEeecccC
Confidence 3332 12333568889999988 6554434444
No 247
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=55.18 E-value=27 Score=30.45 Aligned_cols=82 Identities=12% Similarity=0.062 Sum_probs=51.8
Q ss_pred CeEEEcC---CCCcchHHHHHHhhhcCCcEEEEeCC-CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc
Q 013019 250 GHIVTTT---DCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (451)
Q Consensus 250 D~VIv~~---~~Y~~t~~~l~~~l~~~Gi~v~~vd~-~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~ 325 (451)
.+|++.. ..|.--..++...++..|.++.+... ..++++.+++.+.++.+|.++.-. +.....++++.+.+++.
T Consensus 19 ~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~~~--~~~~~~~~~~i~~L~~~ 96 (161)
T 2yxb_A 19 YKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSILN--GAHLHLMKRLMAKLREL 96 (161)
T ss_dssp CEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEESS--SCHHHHHHHHHHHHHHT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEeec--hhhHHHHHHHHHHHHhc
Confidence 3555442 33433345566678888999987654 357777777765568888886544 34445678888888775
Q ss_pred C---CEEEEec
Q 013019 326 G---AIVCIDG 333 (451)
Q Consensus 326 g---~~lVVD~ 333 (451)
| +.+++=.
T Consensus 97 g~~~i~v~vGG 107 (161)
T 2yxb_A 97 GADDIPVVLGG 107 (161)
T ss_dssp TCTTSCEEEEE
T ss_pred CCCCCEEEEeC
Confidence 4 4454443
No 248
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=54.29 E-value=1.1e+02 Score=26.96 Aligned_cols=120 Identities=13% Similarity=0.189 Sum_probs=62.3
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE--EEEeCCCCHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADME 286 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~--v~~vd~~D~d 286 (451)
.+....+-..+.........+=+++|+......+...++++.+|+..+..-. .....+..+...|+. ++++.. |..
T Consensus 49 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~v~~~~~-d~~ 126 (225)
T 3tr6_A 49 APEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEK-STALAKEYWEKAGLSDKIGLRLS-PAK 126 (225)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHH-HHHHHHHHHHHTTCTTTEEEEES-CHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHH-HHHHHHHHHHHCCCCCceEEEeC-CHH
Confidence 4555566666666666677777888875554444444444667777664322 233333444444542 444332 343
Q ss_pred HHHHhhcC----CCeEEEEEeCCCCCccccccHHHHHHHHHh---cCCEEEEecCCC
Q 013019 287 GLEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIVCIDGTFA 336 (451)
Q Consensus 287 ~Le~ai~~----~~tklV~lesPsNPtG~v~DL~~IaelA~~---~g~~lVVD~tfa 336 (451)
+....+.. ....+|++..+ ..+...+.+.+.+ .|..+++|+++.
T Consensus 127 ~~~~~~~~~~~~~~fD~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 127 DTLAELIHAGQAWQYDLIYIDAD------KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp HHHHHHHTTTCTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred HHHHHhhhccCCCCccEEEECCC------HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 33222221 24788887443 2233333333332 366777888753
No 249
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=51.85 E-value=1.1e+02 Score=27.72 Aligned_cols=123 Identities=13% Similarity=0.103 Sum_probs=64.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE--EEEeCCCCHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADME 286 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~--v~~vd~~D~d 286 (451)
.+....+-..++.+.+....+=+++|+......+...++++.+|+..+..- ......+..+...|+. ++++. .|..
T Consensus 48 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~-~~~~~a~~~~~~~g~~~~v~~~~-~d~~ 125 (248)
T 3tfw_A 48 AANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADA-HHAQVARENLQLAGVDQRVTLRE-GPAL 125 (248)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCH-HHHHHHHHHHHHTTCTTTEEEEE-SCHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEE-cCHH
Confidence 466666666777777777777788888555554444444466777766432 2233333444444542 44433 2444
Q ss_pred HHHHhhcC-CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 287 GLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 287 ~Le~ai~~-~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
+....+.+ ....+|++..+. .....-++.+.++.+ .|..+++|++..
T Consensus 126 ~~l~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lk-pGG~lv~~~~~~ 173 (248)
T 3tfw_A 126 QSLESLGECPAFDLIFIDADK--PNNPHYLRWALRYSR-PGTLIIGDNVVR 173 (248)
T ss_dssp HHHHTCCSCCCCSEEEECSCG--GGHHHHHHHHHHTCC-TTCEEEEECCSG
T ss_pred HHHHhcCCCCCeEEEEECCch--HHHHHHHHHHHHhcC-CCeEEEEeCCCc
Confidence 43233322 136788884421 011111333333333 366888888753
No 250
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=51.51 E-value=1.2e+02 Score=26.46 Aligned_cols=120 Identities=15% Similarity=0.181 Sum_probs=63.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc--EEEEeCCCCHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi--~v~~vd~~D~d 286 (451)
.|....+-..+..+......+=+++|+......+...++++.+|+..+..-. .....+..+...|+ .+.++.. |..
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~v~~~~~-d~~ 120 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEK-HADIARSNIERANLNDRVEVRTG-LAL 120 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHH-HHHHHHHHHHHTTCTTTEEEEES-CHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEc-CHH
Confidence 4666666666766667677777888876555555444554667777664322 23333344444444 2444332 332
Q ss_pred H-HHHhhcC--CCeEEEEEeCCCCCccccccHHHHHHHHHh---cCCEEEEecCCC
Q 013019 287 G-LEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIVCIDGTFA 336 (451)
Q Consensus 287 ~-Le~ai~~--~~tklV~lesPsNPtG~v~DL~~IaelA~~---~g~~lVVD~tfa 336 (451)
+ +...... ....+|++..+. .....+.+.+.+ .|..+++|+.+.
T Consensus 121 ~~~~~~~~~~~~~fD~v~~d~~~------~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 121 DSLQQIENEKYEPFDFIFIDADK------QNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp HHHHHHHHTTCCCCSEEEECSCG------GGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred HHHHHHHhcCCCCcCEEEEcCCc------HHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 2 2222211 236788875431 222333333332 366888888754
No 251
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=50.12 E-value=59 Score=30.46 Aligned_cols=103 Identities=12% Similarity=0.152 Sum_probs=57.3
Q ss_pred cEEEeC-CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCC
Q 013019 227 STVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (451)
Q Consensus 227 ~~vv~s-SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesP 305 (451)
..++++ +|.-+- .++..|++.|.+|++....-......+.. +...|+++...|..|.+.++++++. ...|+....
T Consensus 13 ~ilVtGatG~iG~-~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-l~~~~v~~v~~Dl~d~~~l~~a~~~--~d~vi~~a~ 88 (318)
T 2r6j_A 13 KILIFGGTGYIGN-HMVKGSLKLGHPTYVFTRPNSSKTTLLDE-FQSLGAIIVKGELDEHEKLVELMKK--VDVVISALA 88 (318)
T ss_dssp CEEEETTTSTTHH-HHHHHHHHTTCCEEEEECTTCSCHHHHHH-HHHTTCEEEECCTTCHHHHHHHHTT--CSEEEECCC
T ss_pred eEEEECCCchHHH-HHHHHHHHCCCcEEEEECCCCchhhHHHH-hhcCCCEEEEecCCCHHHHHHHHcC--CCEEEECCc
Confidence 355554 344232 23445667787665532211112222211 2345788888899999999999975 566665433
Q ss_pred CCCccccccHHHHHHHHHhcC-CEEEEecCCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKG-AIVCIDGTFA 336 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g-~~lVVD~tfa 336 (451)
.. .+.....+.+.|++.| +.-++=..++
T Consensus 89 ~~---~~~~~~~l~~aa~~~g~v~~~v~S~~g 117 (318)
T 2r6j_A 89 FP---QILDQFKILEAIKVAGNIKRFLPSDFG 117 (318)
T ss_dssp GG---GSTTHHHHHHHHHHHCCCCEEECSCCS
T ss_pred hh---hhHHHHHHHHHHHhcCCCCEEEeeccc
Confidence 21 1344578888898887 6444423444
No 252
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=50.02 E-value=1.4e+02 Score=26.67 Aligned_cols=120 Identities=14% Similarity=0.195 Sum_probs=62.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc--EEEEeCCCCH
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADM 285 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi--~v~~vd~~D~ 285 (451)
..|....+-..+..+.+....+=+++|+......+...++++.+|+..+..-. ........+...|+ .+.++.. |.
T Consensus 56 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~-~~~~a~~~~~~~g~~~~i~~~~~-d~ 133 (232)
T 3cbg_A 56 ISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPN-ATAIAKKYWQKAGVAEKISLRLG-PA 133 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHH-HHHHHHHHHHHHTCGGGEEEEES-CH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEc-CH
Confidence 45666666666666767777777888875544444434444567777664322 22333333333343 2444332 33
Q ss_pred HH-HHHhhcC---CCeEEEEEeCCCCCccccccHHHHHHHHHh---cCCEEEEecCC
Q 013019 286 EG-LEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIVCIDGTF 335 (451)
Q Consensus 286 d~-Le~ai~~---~~tklV~lesPsNPtG~v~DL~~IaelA~~---~g~~lVVD~tf 335 (451)
.+ +.....+ ....+|++..+ ..+...+.+.+.+ .|..+++|++.
T Consensus 134 ~~~l~~l~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 134 LATLEQLTQGKPLPEFDLIFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp HHHHHHHHTSSSCCCEEEEEECSC------GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred HHHHHHHHhcCCCCCcCEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 33 3332211 24788887543 1233343443433 36677778764
No 253
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=49.98 E-value=1.5e+02 Score=26.98 Aligned_cols=123 Identities=15% Similarity=0.119 Sum_probs=63.7
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc--EEEEeCCCCHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi--~v~~vd~~D~d 286 (451)
.|....+-..+..+.+....+=+++|+......+...++++.+|+..+..- ......+..++..|+ .++++.. |..
T Consensus 64 ~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~-~~~~~a~~~~~~~g~~~~i~~~~g-da~ 141 (247)
T 1sui_A 64 SADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINK-ENYELGLPVIKKAGVDHKIDFREG-PAL 141 (247)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCC-HHHHHHHHHHHHTTCGGGEEEEES-CHH
T ss_pred CHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCH-HHHHHHHHHHHHcCCCCCeEEEEC-CHH
Confidence 455556666666666777777788887555554444455566777766433 233344444455554 3444433 333
Q ss_pred H-HHHhhc----CCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 287 G-LEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 287 ~-Le~ai~----~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
+ +..... ...-.+|++.... .....-++.+.++.+. |.++++|++..
T Consensus 142 ~~l~~l~~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lkp-GG~lv~d~~~~ 193 (247)
T 1sui_A 142 PVLDEMIKDEKNHGSYDFIFVDADK--DNYLNYHKRLIDLVKV-GGVIGYDNTLW 193 (247)
T ss_dssp HHHHHHHHSGGGTTCBSEEEECSCS--TTHHHHHHHHHHHBCT-TCCEEEECTTG
T ss_pred HHHHHHHhccCCCCCEEEEEEcCch--HHHHHHHHHHHHhCCC-CeEEEEecCCc
Confidence 3 332210 2236788885431 1111123444444443 55667888743
No 254
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=48.94 E-value=92 Score=28.80 Aligned_cols=105 Identities=11% Similarity=0.112 Sum_probs=56.7
Q ss_pred EEEeC-CHHHHHHHHHHHHccCCCeEEEcCCC-Cc---chHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEE
Q 013019 228 TVIMA-SGMSASTVMLLALVPAGGHIVTTTDC-YR---KTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFT 302 (451)
Q Consensus 228 ~vv~s-SG~aAi~~al~all~~GD~VIv~~~~-Y~---~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~l 302 (451)
.++++ +|.-+- .++..|++.|.+|++.... -. .....+.. +...++++...|..|.+.++++++. ...|+.
T Consensus 7 ilVtGatG~iG~-~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~l~~~~~~--~d~vi~ 82 (313)
T 1qyd_A 7 VLIVGGTGYIGK-RIVNASISLGHPTYVLFRPEVVSNIDKVQMLLY-FKQLGAKLIEASLDDHQRLVDALKQ--VDVVIS 82 (313)
T ss_dssp EEEESTTSTTHH-HHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHH-HHTTTCEEECCCSSCHHHHHHHHTT--CSEEEE
T ss_pred EEEEcCCcHHHH-HHHHHHHhCCCcEEEEECCCcccchhHHHHHHH-HHhCCeEEEeCCCCCHHHHHHHHhC--CCEEEE
Confidence 44553 344222 2334566778776654322 11 11111211 2345788777788899999999975 556655
Q ss_pred eCCCC-CccccccHHHHHHHHHhcC-CEEEEecCCC
Q 013019 303 ESPTN-PFLRCVDVKLVSDLCHKKG-AIVCIDGTFA 336 (451)
Q Consensus 303 esPsN-PtG~v~DL~~IaelA~~~g-~~lVVD~tfa 336 (451)
..... +...+.....+.+.|++.| +.-++=..++
T Consensus 83 ~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g 118 (313)
T 1qyd_A 83 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFG 118 (313)
T ss_dssp CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCS
T ss_pred CCccccchhhHHHHHHHHHHHHhcCCCceEEecCCc
Confidence 43321 1113344678899999988 6433313443
No 255
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=48.80 E-value=1.1e+02 Score=28.87 Aligned_cols=122 Identities=12% Similarity=0.076 Sum_probs=69.5
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEcC---CCCcchHHHHHHh--------hhcC-CcEEEEeCC-CCHHHHHHhhcCCCeE
Q 013019 232 ASGMSASTVMLLALVPAGGHIVTTT---DCYRKTRIFIETV--------LPKM-GITATVIDP-ADMEGLEAALNNNNVS 298 (451)
Q Consensus 232 sSG~aAi~~al~all~~GD~VIv~~---~~Y~~t~~~l~~~--------l~~~-Gi~v~~vd~-~D~d~Le~ai~~~~tk 298 (451)
+.-+..+...+........+|++.. ..|.--..++..+ ++.. |.++.+.-. ..++++.+++.+.++.
T Consensus 103 ~~~~~~~~~~l~~~~~~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~aa~e~~~d 182 (262)
T 1xrs_B 103 ILSMEETDEYIKENIGRKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAVELEAD 182 (262)
T ss_dssp CCCHHHHHHHHHHHTCSCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHHHHHcCCC
Confidence 3334444444444443334555533 3443334445555 7888 999876543 2467776666655688
Q ss_pred EEEEeCCCCCcc--ccccHHHHHHHHHhcC----CEEEEecCCCCCCccccccCCCcEEEECCc
Q 013019 299 LFFTESPTNPFL--RCVDVKLVSDLCHKKG----AIVCIDGTFATPLNQKALSLGADLVLHSAT 356 (451)
Q Consensus 299 lV~lesPsNPtG--~v~DL~~IaelA~~~g----~~lVVD~tfa~~~~~~pl~~GaDiVv~S~S 356 (451)
+|.+..-.. ++ ....++++.+.+++.| +.+++=....+. ....+.|+|.+....+
T Consensus 183 ~VglS~l~t-~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~~~~~--~~a~~iGad~~~~da~ 243 (262)
T 1xrs_B 183 VLLVSQTVT-QKNVHIQNMTHLIELLEAEGLRDRFVLLCGGPRINN--EIAKELGYDAGFGPGR 243 (262)
T ss_dssp EEEEECCCC-TTSHHHHHHHHHHHHHHHTTCGGGSEEEEECTTCCH--HHHHTTTCSEEECTTC
T ss_pred EEEEEeecC-CccchHHHHHHHHHHHHhcCCCCCCEEEEECCcCCH--HHHHHcCCeEEECCch
Confidence 888854442 11 3456778888888766 778777663221 1122457777765443
No 256
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=47.40 E-value=64 Score=31.36 Aligned_cols=103 Identities=16% Similarity=0.205 Sum_probs=58.2
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCCC-eEEEcCCC---CcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEE
Q 013019 226 ESTVIMASGMSASTVMLLALVPAGG-HIVTTTDC---YRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 301 (451)
Q Consensus 226 e~~vv~sSG~aAi~~al~all~~GD-~VIv~~~~---Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~ 301 (451)
..+++++.|-.+ ..++.+|...|- +|.+.+.. ......+.+.+-...+..+..++..+.+++.+.+.+ ..+|+
T Consensus 155 k~~lVlGaGG~g-~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~--aDiII 231 (315)
T 3tnl_A 155 KKMTICGAGGAA-TAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAE--SVIFT 231 (315)
T ss_dssp SEEEEECCSHHH-HHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHT--CSEEE
T ss_pred CEEEEECCChHH-HHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcC--CCEEE
Confidence 467888776433 344445566674 66665444 333333333333445666776666677788877764 57888
Q ss_pred EeCCCCCccc----cc-cHHHHHHHHHhcCCEEEEecCCCC
Q 013019 302 TESPTNPFLR----CV-DVKLVSDLCHKKGAIVCIDGTFAT 337 (451)
Q Consensus 302 lesPsNPtG~----v~-DL~~IaelA~~~g~~lVVD~tfa~ 337 (451)
-.+|....+. .. +.+.+ ..-.+|+|-+|..
T Consensus 232 NaTp~Gm~~~~~~~p~~~~~~l------~~~~~V~DlvY~P 266 (315)
T 3tnl_A 232 NATGVGMKPFEGETLLPSADML------RPELIVSDVVYKP 266 (315)
T ss_dssp ECSSTTSTTSTTCCSCCCGGGC------CTTCEEEESCCSS
T ss_pred ECccCCCCCCCCCCCCCcHHHc------CCCCEEEEeccCC
Confidence 7777543222 12 22222 1235788988753
No 257
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=47.17 E-value=12 Score=37.81 Aligned_cols=82 Identities=15% Similarity=0.213 Sum_probs=49.1
Q ss_pred cCCCeEEEcCCCCcchHHH----HHHhhhcCCcEEEEeCCCCHHHH------HHhhcCCC-eEEEEEeCCCCCccccccH
Q 013019 247 PAGGHIVTTTDCYRKTRIF----IETVLPKMGITATVIDPADMEGL------EAALNNNN-VSLFFTESPTNPFLRCVDV 315 (451)
Q Consensus 247 ~~GD~VIv~~~~Y~~t~~~----l~~~l~~~Gi~v~~vd~~D~d~L------e~ai~~~~-tklV~lesPsNPtG~v~DL 315 (451)
.+|..+|+.--.+. +.- +...++.+|+.-.++.+.. +.+ ........ +. | .+.+..|+..|+
T Consensus 7 ~~g~~~i~~~f~W~--w~~ia~e~~~yl~~~G~~~v~~~P~~-e~~~~~~~~~~~~~~Y~~~d--y--~i~~~~Gt~~df 79 (496)
T 4gqr_A 7 QQGRTSIVHLFEWR--WVDIALECERYLAPKGFGGVQVSPPN-ENVAIYNPFRPWWERYQPVS--Y--KLCTRSGNEDEF 79 (496)
T ss_dssp CTTCCEEEEETTCC--HHHHHHHHHHTTTTTTCCEEEECCCS-CBBCCTTTTSCGGGGGSBSC--S--CSCBTTBCHHHH
T ss_pred CCCCcEEEEecCCC--HHHHHHHHHHHHHHhCCCEEEeCccc-cCccCCCCCCCcccccCccC--c--eeCCCCCCHHHH
Confidence 35666776544442 222 2234677888877775431 000 00000000 11 2 345568999999
Q ss_pred HHHHHHHHhcCCEEEEecCC
Q 013019 316 KLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 316 ~~IaelA~~~g~~lVVD~tf 335 (451)
++|++-||++|+.||+|-++
T Consensus 80 ~~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 80 RNMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp HHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHCCCEEEEEEcc
Confidence 99999999999999999984
No 258
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=47.13 E-value=1.6e+02 Score=26.47 Aligned_cols=119 Identities=18% Similarity=0.184 Sum_probs=62.4
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc--EEEEeCCCCHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi--~v~~vd~~D~d 286 (451)
.|....+-+.+..+.+....+=+++|+......+...++++.+|+..+.. .......+..++..|+ .++++.. |..
T Consensus 55 ~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~-~~~~~~a~~~~~~~g~~~~i~~~~g-da~ 132 (237)
T 3c3y_A 55 SPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFD-REAYEIGLPFIRKAGVEHKINFIES-DAM 132 (237)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESC-HHHHHHHHHHHHHTTCGGGEEEEES-CHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECC-HHHHHHHHHHHHHcCCCCcEEEEEc-CHH
Confidence 45555566666666677777778777754444444445556677776643 2233344444454554 2444433 333
Q ss_pred H-HHHhhc----CCCeEEEEEeCCCCCccccccHHHHHHHHHh---cCCEEEEecCC
Q 013019 287 G-LEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIVCIDGTF 335 (451)
Q Consensus 287 ~-Le~ai~----~~~tklV~lesPsNPtG~v~DL~~IaelA~~---~g~~lVVD~tf 335 (451)
+ +..... .....+|++..+. .+...+.+.+.+ .|..+++|++.
T Consensus 133 ~~l~~l~~~~~~~~~fD~I~~d~~~------~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 133 LALDNLLQGQESEGSYDFGFVDADK------PNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp HHHHHHHHSTTCTTCEEEEEECSCG------GGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred HHHHHHHhccCCCCCcCEEEECCch------HHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 2 333211 2247899885321 233333333332 36677888874
No 259
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=47.02 E-value=1.3e+02 Score=25.82 Aligned_cols=110 Identities=22% Similarity=0.212 Sum_probs=57.0
Q ss_pred HHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCC--HHHHHH
Q 013019 213 VVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD--MEGLEA 290 (451)
Q Consensus 213 ~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D--~d~Le~ 290 (451)
+.+++.+..+.+++..++++.|.+...+.... ..+.+.|..+..++... ......
T Consensus 27 ~~l~~~~~~i~~a~~I~i~G~G~S~~~a~~~~-----------------------~~l~~~g~~~~~~~~~~~~~~~~~~ 83 (187)
T 3sho_A 27 EAIEAAVEAICRADHVIVVGMGFSAAVAVFLG-----------------------HGLNSLGIRTTVLTEGGSTLTITLA 83 (187)
T ss_dssp HHHHHHHHHHHHCSEEEEECCGGGHHHHHHHH-----------------------HHHHHTTCCEEEECCCTHHHHHHHH
T ss_pred HHHHHHHHHHHhCCEEEEEecCchHHHHHHHH-----------------------HHHHhcCCCEEEecCCchhHHHHHh
Confidence 34555555555667888888887543332111 01122344444433111 111122
Q ss_pred hhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEE--EecCCCCCCccccccCCCcEEEECCc
Q 013019 291 ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC--IDGTFATPLNQKALSLGADLVLHSAT 356 (451)
Q Consensus 291 ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lV--VD~tfa~~~~~~pl~~GaDiVv~S~S 356 (451)
.++++ .-+|++ + ..|...++-++++.++++|+.+| .|+. ..++...+|+++...+
T Consensus 84 ~~~~~-d~~i~i-S---~sG~t~~~~~~~~~ak~~g~~vi~IT~~~------~s~l~~~ad~~l~~~~ 140 (187)
T 3sho_A 84 NLRPT-DLMIGV-S---VWRYLRDTVAALAGAAERGVPTMALTDSS------VSPPARIADHVLVAAT 140 (187)
T ss_dssp TCCTT-EEEEEE-C---CSSCCHHHHHHHHHHHHTTCCEEEEESCT------TSHHHHHCSEEEECCC
T ss_pred cCCCC-CEEEEE-e---CCCCCHHHHHHHHHHHHCCCCEEEEeCCC------CCcchhhCcEEEEecC
Confidence 34443 334443 2 34777788889999999987644 3432 2344444788776544
No 260
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=46.91 E-value=87 Score=28.56 Aligned_cols=123 Identities=13% Similarity=0.114 Sum_probs=60.3
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc--EEEEeCCCCHH
Q 013019 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (451)
Q Consensus 209 npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi--~v~~vd~~D~d 286 (451)
.|....+-..+....+...++=+++|+......+...++++.+|+..+..-.. ....+..++..|+ .++++.. |..
T Consensus 45 ~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~-~~~a~~~~~~~g~~~~i~~~~g-da~ 122 (242)
T 3r3h_A 45 APEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGW-TKHAHPYWREAKQEHKIKLRLG-PAL 122 (242)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSS-CCCSHHHHHHTTCTTTEEEEES-CHH
T ss_pred CHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHH-HHHHHHHHHHcCCCCcEEEEEc-CHH
Confidence 45555666666667777777667766644444444445556677776643222 1111122333333 2443332 333
Q ss_pred H-HHHhhc---CCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 287 G-LEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 287 ~-Le~ai~---~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
+ +..... .....+|++..+. .....-++++.++.+ .|.++++|++..
T Consensus 123 ~~l~~~~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lk-pGG~lv~d~~~~ 173 (242)
T 3r3h_A 123 DTLHSLLNEGGEHQFDFIFIDADK--TNYLNYYELALKLVT-PKGLIAIDNIFW 173 (242)
T ss_dssp HHHHHHHHHHCSSCEEEEEEESCG--GGHHHHHHHHHHHEE-EEEEEEEECSSS
T ss_pred HHHHHHhhccCCCCEeEEEEcCCh--HHhHHHHHHHHHhcC-CCeEEEEECCcc
Confidence 3 332211 1247899986541 111111333333333 366778888853
No 261
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=45.56 E-value=24 Score=32.39 Aligned_cols=35 Identities=9% Similarity=-0.086 Sum_probs=31.0
Q ss_pred eEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEE
Q 013019 297 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (451)
Q Consensus 297 tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVV 331 (451)
+..|++|-..|..|....++++.++|++||+.++.
T Consensus 160 Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 160 PAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp SBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred ceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 67888887778999999999999999999998763
No 262
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=43.33 E-value=1.4e+02 Score=24.76 Aligned_cols=96 Identities=16% Similarity=0.122 Sum_probs=54.4
Q ss_pred CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhh-cCCcEEEEeCCCCHHHHHHh-hcCCCeEEEEE
Q 013019 225 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KMGITATVIDPADMEGLEAA-LNNNNVSLFFT 302 (451)
Q Consensus 225 ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~-~~Gi~v~~vd~~D~d~Le~a-i~~~~tklV~l 302 (451)
....++++.|.-+...+ ..+...|-.|++.+..-.. + ..+. ..|..+...+..+.+.++++ +.. ..+|++
T Consensus 19 ~~~v~IiG~G~iG~~la-~~L~~~g~~V~vid~~~~~----~-~~~~~~~g~~~~~~d~~~~~~l~~~~~~~--ad~Vi~ 90 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIA-NLASSSGHSVVVVDKNEYA----F-HRLNSEFSGFTVVGDAAEFETLKECGMEK--ADMVFA 90 (155)
T ss_dssp CCEEEEECCSHHHHHHH-HHHHHTTCEEEEEESCGGG----G-GGSCTTCCSEEEESCTTSHHHHHTTTGGG--CSEEEE
T ss_pred CCcEEEECCCHHHHHHH-HHHHhCCCeEEEEECCHHH----H-HHHHhcCCCcEEEecCCCHHHHHHcCccc--CCEEEE
Confidence 46788888888665443 3445567677665432211 1 1233 45776655566677777765 433 578888
Q ss_pred eCCCCCccccccHHHHHHHHHh-cC-CEEEEec
Q 013019 303 ESPTNPFLRCVDVKLVSDLCHK-KG-AIVCIDG 333 (451)
Q Consensus 303 esPsNPtG~v~DL~~IaelA~~-~g-~~lVVD~ 333 (451)
++++. .....+.+++++ .+ ..++...
T Consensus 91 ~~~~~-----~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 91 FTNDD-----STNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp CSSCH-----HHHHHHHHHHHHTSCCSEEEEEC
T ss_pred EeCCc-----HHHHHHHHHHHHHCCCCeEEEEE
Confidence 76641 123456667776 44 3444443
No 263
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=42.94 E-value=49 Score=31.50 Aligned_cols=70 Identities=20% Similarity=0.356 Sum_probs=42.3
Q ss_pred CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC------C---CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHH
Q 013019 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (451)
Q Consensus 248 ~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~------~---D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~I 318 (451)
++..+++..+.|+- +++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+
T Consensus 178 ~~~~~v~~H~af~Y-------f~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 243 (286)
T 3gi1_A 178 RSKTFVTQHTAFSY-------LAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIA 243 (286)
T ss_dssp SCCEEEEEESCCHH-------HHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHH
T ss_pred CCCEEEEECCchHH-------HHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 46778887666652 34567777544321 1 3455566666556888888754433 333
Q ss_pred HHHHHhcCCEEEE
Q 013019 319 SDLCHKKGAIVCI 331 (451)
Q Consensus 319 aelA~~~g~~lVV 331 (451)
..++++.|+.+++
T Consensus 244 ~~la~~~g~~v~~ 256 (286)
T 3gi1_A 244 HAIAKSTGAKVKT 256 (286)
T ss_dssp HHHHHTTTCEEEE
T ss_pred HHHHHHhCCeEEE
Confidence 4567788887764
No 264
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=42.47 E-value=97 Score=28.16 Aligned_cols=79 Identities=23% Similarity=0.237 Sum_probs=43.3
Q ss_pred HHHHccC--CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHH
Q 013019 242 LLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (451)
Q Consensus 242 l~all~~--GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~Ia 319 (451)
+..|++. |.+|++....-..... +...++++...|..|.+.++++++. ...|+......+...+.-...+.
T Consensus 16 ~~~L~~~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~a~~~~~~~~~~~~~l~ 88 (286)
T 2zcu_A 16 IESLMKTVPASQIVAIVRNPAKAQA-----LAAQGITVRQADYGDEAALTSALQG--VEKLLLISSSEVGQRAPQHRNVI 88 (286)
T ss_dssp HHHHTTTSCGGGEEEEESCTTTCHH-----HHHTTCEEEECCTTCHHHHHHHTTT--CSEEEECC--------CHHHHHH
T ss_pred HHHHHhhCCCceEEEEEcChHhhhh-----hhcCCCeEEEcCCCCHHHHHHHHhC--CCEEEEeCCCCchHHHHHHHHHH
Confidence 4456665 7666654322111111 1123677777788899999998864 45565433322222233456788
Q ss_pred HHHHhcCC
Q 013019 320 DLCHKKGA 327 (451)
Q Consensus 320 elA~~~g~ 327 (451)
+.|++.|+
T Consensus 89 ~a~~~~~~ 96 (286)
T 2zcu_A 89 NAAKAAGV 96 (286)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCC
Confidence 88888775
No 265
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=42.34 E-value=77 Score=28.32 Aligned_cols=101 Identities=18% Similarity=0.120 Sum_probs=61.3
Q ss_pred CeEEEcC---CCCcchHHHHHHhhhcCCcEEEEeCCC-CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc
Q 013019 250 GHIVTTT---DCYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (451)
Q Consensus 250 D~VIv~~---~~Y~~t~~~l~~~l~~~Gi~v~~vd~~-D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~ 325 (451)
.+|++.. ..|.--..++...++..|.++.+.... ..+++.+++.+.++.+|.+..-. +.....++++.+..++.
T Consensus 89 ~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~--~~~~~~~~~~i~~l~~~ 166 (210)
T 1y80_A 89 GKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALL--TTTMMNMKSTIDALIAA 166 (210)
T ss_dssp CEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCS--GGGTHHHHHHHHHHHHT
T ss_pred CEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHhc
Confidence 3555543 334334455667788899999887653 46777777765457888885433 33455688888888876
Q ss_pred C----CEEEEecCCCCCCccccccCCCcEEEEC
Q 013019 326 G----AIVCIDGTFATPLNQKALSLGADLVLHS 354 (451)
Q Consensus 326 g----~~lVVD~tfa~~~~~~pl~~GaDiVv~S 354 (451)
+ +.+++=....+.-. ....|+|.+..+
T Consensus 167 ~~~~~~~v~vGG~~~~~~~--~~~~gad~~~~d 197 (210)
T 1y80_A 167 GLRDRVKVIVGGAPLSQDF--ADEIGADGYAPD 197 (210)
T ss_dssp TCGGGCEEEEESTTCCHHH--HHHHTCSEECSS
T ss_pred CCCCCCeEEEECCCCCHHH--HHHcCCeEEECC
Confidence 5 77777665332111 123466655443
No 266
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=41.12 E-value=1.2e+02 Score=26.74 Aligned_cols=42 Identities=17% Similarity=0.066 Sum_probs=27.3
Q ss_pred ccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEEC
Q 013019 309 FLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHS 354 (451)
Q Consensus 309 tG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S 354 (451)
.|...++-++++.|++.|+.+|.=- .....++..-+|+++..
T Consensus 99 SG~t~~~i~~~~~ak~~g~~vI~IT----~~~~s~La~~ad~~l~~ 140 (200)
T 1vim_A 99 SGETTSVVNISKKAKDIGSKLVAVT----GKRDSSLAKMADVVMVV 140 (200)
T ss_dssp SSCCHHHHHHHHHHHHHTCEEEEEE----SCTTSHHHHHCSEEEEC
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEEE----CCCCChHHHhCCEEEEE
Confidence 4777788899999999998754321 11223444447887753
No 267
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=40.52 E-value=77 Score=30.20 Aligned_cols=98 Identities=15% Similarity=0.048 Sum_probs=61.2
Q ss_pred eEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEE
Q 013019 251 HIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV 329 (451)
Q Consensus 251 ~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~l 329 (451)
+|++....|++....+..+.+..++++..-|. .|..++.++..-. ...|++-.. .....+++++.+.|++.|..+
T Consensus 97 sVltd~~~f~Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~G-AD~VlLi~a---~L~~~~l~~l~~~a~~lGl~~ 172 (272)
T 3tsm_A 97 SVLTDTPSFQGAPEFLTAARQACSLPALRKDFLFDPYQVYEARSWG-ADCILIIMA---SVDDDLAKELEDTAFALGMDA 172 (272)
T ss_dssp EEECCSTTTCCCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTT-CSEEEEETT---TSCHHHHHHHHHHHHHTTCEE
T ss_pred EEeccccccCCCHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcC-CCEEEEccc---ccCHHHHHHHHHHHHHcCCeE
Confidence 56666666767777776665556676644443 4556676665543 556666332 223346889999999999998
Q ss_pred EEecCCCCCCccccccCCCcEEEE
Q 013019 330 CIDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 330 VVD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
++|-.-.. -..+.+.+|+|++-.
T Consensus 173 lvevh~~e-El~~A~~~ga~iIGi 195 (272)
T 3tsm_A 173 LIEVHDEA-EMERALKLSSRLLGV 195 (272)
T ss_dssp EEEECSHH-HHHHHTTSCCSEEEE
T ss_pred EEEeCCHH-HHHHHHhcCCCEEEE
Confidence 88864211 123455678887643
No 268
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=39.23 E-value=1.6e+02 Score=29.97 Aligned_cols=124 Identities=17% Similarity=0.261 Sum_probs=64.0
Q ss_pred HHHHHHHHHhhhCC----------CcEEEeC--CH--HHHHH-HHHHHHccCCCeE-EEcCCCCc-chHHHHHHhhhcCC
Q 013019 212 TVVVEEKMSALEGA----------ESTVIMA--SG--MSAST-VMLLALVPAGGHI-VTTTDCYR-KTRIFIETVLPKMG 274 (451)
Q Consensus 212 ~~~Lee~LA~l~ga----------e~~vv~s--SG--~aAi~-~al~all~~GD~V-Iv~~~~Y~-~t~~~l~~~l~~~G 274 (451)
...+.+.|.++++. ...+++. +| =.-+. .+...+.+.|.+| ++..+.|. +.+..+.......|
T Consensus 76 ~~~l~~eL~~~L~~~~~~~~~~~~p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~aa~eqL~~~~~~~g 155 (443)
T 3dm5_A 76 IKIVYEELTKFLGTEAKPIEIKEKPTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYH 155 (443)
T ss_dssp HHHHHHHHHHHTTSSCCCCCCCSSSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHHHhcCcccccccCCCCeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchhHHHHHHHHHHhcC
Confidence 34567777777653 2233332 23 23222 2233445567654 44444454 34445555566778
Q ss_pred cEEEEeC-CCCHHH-----HHHhhcCCCeEEEEEeCCCCCccc---cccHHHHHHHHHhcCCEEEEecCCC
Q 013019 275 ITATVID-PADMEG-----LEAALNNNNVSLFFTESPTNPFLR---CVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 275 i~v~~vd-~~D~d~-----Le~ai~~~~tklV~lesPsNPtG~---v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
+++...+ ..|+.+ ++.+-.+ ...+|++++|.-..-. ...+..+.+..+.+.+++|+|.+.+
T Consensus 156 vpv~~~~~~~dp~~i~~~al~~a~~~-~~DvVIIDTaGrl~~d~~lm~el~~i~~~~~pd~vlLVvDA~~g 225 (443)
T 3dm5_A 156 IEVFGNPQEKDAIKLAKEGVDYFKSK-GVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIG 225 (443)
T ss_dssp CEEECCTTCCCHHHHHHHHHHHHHHT-TCSEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGG
T ss_pred CcEEecCCCCCHHHHHHHHHHHHHhC-CCCEEEEECCCcccchHHHHHHHHHHHHhhcCceEEEEEeCCCc
Confidence 8765433 235433 3333333 3689999998521111 1124444444445678999998753
No 269
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=39.00 E-value=71 Score=30.83 Aligned_cols=69 Identities=16% Similarity=0.264 Sum_probs=42.9
Q ss_pred CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC------C---CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHH
Q 013019 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (451)
Q Consensus 248 ~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~------~---D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~I 318 (451)
++..+++..+.|+- +++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+
T Consensus 189 ~~~~~v~~H~af~Y-------fa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~ 254 (312)
T 2o1e_A 189 EKKEFITQHTAFGY-------LAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIASS-------KVA 254 (312)
T ss_dssp SCCEEEESSCTTHH-------HHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECSSCCCH-------HHH
T ss_pred CCCEEEEECCchHH-------HHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 46678887666542 34667887654421 1 3556666666667889988644432 445
Q ss_pred HHHHHhcCCEEE
Q 013019 319 SDLCHKKGAIVC 330 (451)
Q Consensus 319 aelA~~~g~~lV 330 (451)
..++++.|+.++
T Consensus 255 ~~ia~e~g~~v~ 266 (312)
T 2o1e_A 255 DTLASEIGAKTE 266 (312)
T ss_dssp HHHHHHTCCEEE
T ss_pred HHHHHHhCCcEE
Confidence 556788888764
No 270
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=38.73 E-value=1.2e+02 Score=31.08 Aligned_cols=95 Identities=8% Similarity=-0.028 Sum_probs=66.9
Q ss_pred HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCC-cEEEEeCC--CCHHHHHHhhcCCCeEEEEEeCCCCCcccc
Q 013019 236 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG-ITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (451)
Q Consensus 236 aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~G-i~v~~vd~--~D~d~Le~ai~~~~tklV~lesPsNPtG~v 312 (451)
+++.. +..++.+-+-+.+.+|....-+..+..+.+..+ +++.--|. .+++.+++.|+.+-...|.+- .|-.|.+
T Consensus 283 elid~-y~~lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIK--vnqiGGI 359 (441)
T 3qtp_A 283 GLIAE-YVDYGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLIK--VNQIGTL 359 (441)
T ss_dssp HHHHH-HHHHHHHSCEEEEESCSCTTCHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC--GGGTCCH
T ss_pred HHHHH-HHHHhhhcceeeecCCCChHHHHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEec--ccccccH
Confidence 44433 344556556788888887776666666666676 76544342 378999998876545666663 3458889
Q ss_pred ccHHHHHHHHHhcCCEEEEec
Q 013019 313 VDVKLVSDLCHKKGAIVCIDG 333 (451)
Q Consensus 313 ~DL~~IaelA~~~g~~lVVD~ 333 (451)
.+..+++++|+++|..+++=.
T Consensus 360 TEalkaa~lA~~~G~~vmvsH 380 (441)
T 3qtp_A 360 TETFKTIKMAQEKGWGVMASH 380 (441)
T ss_dssp HHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHcCCeEEEeC
Confidence 999999999999999887644
No 271
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=38.72 E-value=92 Score=31.01 Aligned_cols=73 Identities=10% Similarity=0.034 Sum_probs=43.9
Q ss_pred ccCCCeEEEcCCCCcch------HHHHHHhhhcCCcEEEEeCCC----------C---HHHHHHhhcCCCeEEEEEeCCC
Q 013019 246 VPAGGHIVTTTDCYRKT------RIFIETVLPKMGITATVIDPA----------D---MEGLEAALNNNNVSLFFTESPT 306 (451)
Q Consensus 246 l~~GD~VIv~~~~Y~~t------~~~l~~~l~~~Gi~v~~vd~~----------D---~d~Le~ai~~~~tklV~lesPs 306 (451)
+++||+|-+..|..+.. .......++.+|.++.+-+.. | .++|.+++.+..+++|+...-.
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGG 119 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGG 119 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 57788888887776542 112223466778888765421 1 5678888876668999875544
Q ss_pred CCcccc---ccHHHH
Q 013019 307 NPFLRC---VDVKLV 318 (451)
Q Consensus 307 NPtG~v---~DL~~I 318 (451)
.-+.++ .|.+.|
T Consensus 120 yga~rlLp~LD~~~i 134 (371)
T 3tla_A 120 DNSNSLLPFLDYDAI 134 (371)
T ss_dssp SCGGGGGGGSCHHHH
T ss_pred ccHHHHHhhcChhhH
Confidence 333333 344444
No 272
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=38.72 E-value=1.8e+02 Score=26.39 Aligned_cols=80 Identities=19% Similarity=0.151 Sum_probs=44.9
Q ss_pred HHHHHccC--CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCcc--ccccHH
Q 013019 241 MLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL--RCVDVK 316 (451)
Q Consensus 241 al~all~~--GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG--~v~DL~ 316 (451)
++..|++. |.+|++....-..... +...++++...|..|.+.++++++. ...|+.....++.. .+.-..
T Consensus 16 l~~~L~~~~~g~~V~~~~r~~~~~~~-----l~~~~~~~~~~D~~d~~~l~~~~~~--~d~vi~~a~~~~~~~~n~~~~~ 88 (287)
T 2jl1_A 16 VIQHLLKKVPASQIIAIVRNVEKAST-----LADQGVEVRHGDYNQPESLQKAFAG--VSKLLFISGPHYDNTLLIVQHA 88 (287)
T ss_dssp HHHHHTTTSCGGGEEEEESCTTTTHH-----HHHTTCEEEECCTTCHHHHHHHTTT--CSEEEECCCCCSCHHHHHHHHH
T ss_pred HHHHHHHhCCCCeEEEEEcCHHHHhH-----HhhcCCeEEEeccCCHHHHHHHHhc--CCEEEEcCCCCcCchHHHHHHH
Confidence 34556665 7666654322111111 1224677777788899999999874 45565443322211 112245
Q ss_pred HHHHHHHhcCC
Q 013019 317 LVSDLCHKKGA 327 (451)
Q Consensus 317 ~IaelA~~~g~ 327 (451)
.+.+.|++.|+
T Consensus 89 ~l~~a~~~~~~ 99 (287)
T 2jl1_A 89 NVVKAARDAGV 99 (287)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 67888888876
No 273
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=38.31 E-value=1e+02 Score=28.34 Aligned_cols=102 Identities=12% Similarity=0.096 Sum_probs=55.9
Q ss_pred EEEeC-CHHHHHHHHHHHHccCCCeEEEcCCC-Cc----chHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEE
Q 013019 228 TVIMA-SGMSASTVMLLALVPAGGHIVTTTDC-YR----KTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 301 (451)
Q Consensus 228 ~vv~s-SG~aAi~~al~all~~GD~VIv~~~~-Y~----~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~ 301 (451)
.++++ +|.-+- .++..|++.|.+|++.... -. .....+. .+...|+++...|..|.+.++++++. ...|+
T Consensus 7 ilVtGatG~iG~-~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~-~l~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi 82 (308)
T 1qyc_A 7 ILLIGATGYIGR-HVAKASLDLGHPTFLLVRESTASSNSEKAQLLE-SFKASGANIVHGSIDDHASLVEAVKN--VDVVI 82 (308)
T ss_dssp EEEESTTSTTHH-HHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHH-HHHTTTCEEECCCTTCHHHHHHHHHT--CSEEE
T ss_pred EEEEcCCcHHHH-HHHHHHHhCCCCEEEEECCcccccCHHHHHHHH-HHHhCCCEEEEeccCCHHHHHHHHcC--CCEEE
Confidence 44554 243222 2345566778776654322 11 1111121 12345788777788899999999975 55666
Q ss_pred EeCCCCCccccccHHHHHHHHHhcC-CEEEEecCCC
Q 013019 302 TESPTNPFLRCVDVKLVSDLCHKKG-AIVCIDGTFA 336 (451)
Q Consensus 302 lesPsNPtG~v~DL~~IaelA~~~g-~~lVVD~tfa 336 (451)
...... .+.....+.+.|++.| +.-++=.+++
T Consensus 83 ~~a~~~---~~~~~~~l~~aa~~~g~v~~~v~S~~g 115 (308)
T 1qyc_A 83 STVGSL---QIESQVNIIKAIKEVGTVKRFFPSEFG 115 (308)
T ss_dssp ECCCGG---GSGGGHHHHHHHHHHCCCSEEECSCCS
T ss_pred ECCcch---hhhhHHHHHHHHHhcCCCceEeecccc
Confidence 543321 1334578888898887 5433323444
No 274
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=38.24 E-value=71 Score=27.13 Aligned_cols=87 Identities=13% Similarity=0.106 Sum_probs=51.7
Q ss_pred HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCC---H----HHHHHhhcCCCeEEEEEeCCCCC
Q 013019 236 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD---M----EGLEAALNNNNVSLFFTESPTNP 308 (451)
Q Consensus 236 aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D---~----d~Le~ai~~~~tklV~lesPsNP 308 (451)
..+......+..-|=+|+.+. +|..++ +..|++++.+.... - ..+.+.|.++++.+|+. +|..-
T Consensus 37 ~~l~~~a~~l~~lGf~i~AT~----GTa~~L----~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVIn-t~~~~ 107 (143)
T 2yvq_A 37 PRFLGVAEQLHNEGFKLFATE----ATSDWL----NANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVIN-LPNNN 107 (143)
T ss_dssp HHHHHHHHHHHTTTCEEEEEH----HHHHHH----HHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEE-CCCCC
T ss_pred HHHHHHHHHHHHCCCEEEECc----hHHHHH----HHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEE-CCCCC
Confidence 334444455556676766643 455433 45677776664211 1 23666676666777764 55431
Q ss_pred ccccccHHHHHHHHHhcCCEEEE
Q 013019 309 FLRCVDVKLVSDLCHKKGAIVCI 331 (451)
Q Consensus 309 tG~v~DL~~IaelA~~~g~~lVV 331 (451)
.....|-..|.+.|-++|++++.
T Consensus 108 ~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 108 TKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp GGGHHHHHHHHHHHHHTTCCEEC
T ss_pred CcCCccHHHHHHHHHHhCCCeEc
Confidence 22344777899999999999874
No 275
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=38.23 E-value=95 Score=29.51 Aligned_cols=70 Identities=14% Similarity=0.220 Sum_probs=41.0
Q ss_pred CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC----C---CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHH
Q 013019 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (451)
Q Consensus 248 ~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~----~---D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~Iae 320 (451)
++..+++..+.|+- +++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+..
T Consensus 189 ~~~~~v~~H~af~Y-------f~~~yGl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~~~ 254 (291)
T 1pq4_A 189 PQRKFIVFHPSWAY-------FARDYNLVQIPIEVEGQEPSAQELKQLIDTAKENNLTMVFGETQFST-------KSSEA 254 (291)
T ss_dssp SCCEEEESSCCCHH-------HHHHTTCEEEESCBTTBCCCHHHHHHHHHHHHTTTCCEEEEETTSCC-------HHHHH
T ss_pred CCCEEEEECCchHH-------HHHHCCCEEeecccCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHHHH
Confidence 46778887776652 34567777654321 1 3445555566656888888755443 12233
Q ss_pred HHHhcCCEEEE
Q 013019 321 LCHKKGAIVCI 331 (451)
Q Consensus 321 lA~~~g~~lVV 331 (451)
++++.|+.++.
T Consensus 255 ia~~~g~~v~~ 265 (291)
T 1pq4_A 255 IAAEIGAGVEL 265 (291)
T ss_dssp HHHHHTCEEEE
T ss_pred HHHHcCCeEEE
Confidence 56777776643
No 276
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=37.88 E-value=1.2e+02 Score=28.32 Aligned_cols=89 Identities=12% Similarity=0.097 Sum_probs=51.6
Q ss_pred HHHHccCCCeEEEcCCCC-----cchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHH
Q 013019 242 LLALVPAGGHIVTTTDCY-----RKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVK 316 (451)
Q Consensus 242 l~all~~GD~VIv~~~~Y-----~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~ 316 (451)
+..|++.|.+|++....- ......+.. +...++++...|..|.+.++++++. ...|+..... . .+.-..
T Consensus 21 ~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~-~~~~~v~~v~~D~~d~~~l~~a~~~--~d~vi~~a~~--~-~~~~~~ 94 (321)
T 3c1o_A 21 VRASLSFSHPTFIYARPLTPDSTPSSVQLREE-FRSMGVTIIEGEMEEHEKMVSVLKQ--VDIVISALPF--P-MISSQI 94 (321)
T ss_dssp HHHHHHTTCCEEEEECCCCTTCCHHHHHHHHH-HHHTTCEEEECCTTCHHHHHHHHTT--CSEEEECCCG--G-GSGGGH
T ss_pred HHHHHhCCCcEEEEECCcccccChHHHHHHHH-hhcCCcEEEEecCCCHHHHHHHHcC--CCEEEECCCc--c-chhhHH
Confidence 445666777665543221 111111211 2345788888898899999999975 5666654332 1 134457
Q ss_pred HHHHHHHhcC-CEEEEecCCC
Q 013019 317 LVSDLCHKKG-AIVCIDGTFA 336 (451)
Q Consensus 317 ~IaelA~~~g-~~lVVD~tfa 336 (451)
.+.+.|++.| +.-++=..++
T Consensus 95 ~l~~aa~~~g~v~~~v~S~~g 115 (321)
T 3c1o_A 95 HIINAIKAAGNIKRFLPSDFG 115 (321)
T ss_dssp HHHHHHHHHCCCCEEECSCCS
T ss_pred HHHHHHHHhCCccEEeccccc
Confidence 8888998888 6444434444
No 277
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=37.53 E-value=1e+02 Score=29.10 Aligned_cols=87 Identities=11% Similarity=0.044 Sum_probs=42.0
Q ss_pred HccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEE-eCC-CCHHHHHHhhcCCCeEEEEEeCCCCCccccc----cHHH
Q 013019 245 LVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKL 317 (451)
Q Consensus 245 ll~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~-vd~-~D~d~Le~ai~~~~tklV~lesPsNPtG~v~----DL~~ 317 (451)
+...| |-|++++-.+.....+. ..++..|++..+ +.+ .+.+.++...+.. ...|++-+-.-.||.-. ++.+
T Consensus 119 ~~~aGvdgvii~Dlp~ee~~~~~-~~~~~~gl~~i~liaP~t~~eri~~i~~~~-~gfvY~vS~~GvTG~~~~~~~~~~~ 196 (267)
T 3vnd_A 119 AQAAGVDSVLIADVPVEESAPFS-KAAKAHGIAPIFIAPPNADADTLKMVSEQG-EGYTYLLSRAGVTGTESKAGEPIEN 196 (267)
T ss_dssp HHHHTCCEEEETTSCGGGCHHHH-HHHHHTTCEEECEECTTCCHHHHHHHHHHC-CSCEEESCCCCCC--------CHHH
T ss_pred HHHcCCCEEEeCCCCHhhHHHHH-HHHHHcCCeEEEEECCCCCHHHHHHHHHhC-CCcEEEEecCCCCCCccCCcHHHHH
Confidence 33344 66777766555433333 455667776442 332 3456666555432 23566544444455432 3444
Q ss_pred HHHHHHhc-CCEEEEec
Q 013019 318 VSDLCHKK-GAIVCIDG 333 (451)
Q Consensus 318 IaelA~~~-g~~lVVD~ 333 (451)
+.+-++++ +.+++++-
T Consensus 197 ~v~~vr~~~~~pv~vGf 213 (267)
T 3vnd_A 197 ILTQLAEFNAPPPLLGF 213 (267)
T ss_dssp HHHHHHTTTCCCEEECS
T ss_pred HHHHHHHhcCCCEEEEC
Confidence 44444543 56666653
No 278
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=37.27 E-value=49 Score=28.55 Aligned_cols=55 Identities=13% Similarity=0.037 Sum_probs=39.7
Q ss_pred CHHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHH-HHHHhcCCE-EEEecCCCCC
Q 013019 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVS-DLCHKKGAI-VCIDGTFATP 338 (451)
Q Consensus 284 D~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~Ia-elA~~~g~~-lVVD~tfa~~ 338 (451)
+.+.|.+.+++.++..|+++.|-|..|+... .+.++ .++++.+++ ..+||.+.+-
T Consensus 43 ~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts~ 103 (150)
T 1vhx_A 43 GLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTTM 103 (150)
T ss_dssp CHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCHH
T ss_pred HHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCHH
Confidence 5788999998877999999999888777653 23344 444455754 6679988754
No 279
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=36.95 E-value=19 Score=36.56 Aligned_cols=31 Identities=10% Similarity=0.048 Sum_probs=27.4
Q ss_pred CCCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 305 PsNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
+....|+..|++++++.||++|+.||+|-++
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 87 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAAGVDIYVDTLI 87 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 4445788999999999999999999999985
No 280
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=36.93 E-value=96 Score=30.09 Aligned_cols=69 Identities=14% Similarity=0.089 Sum_probs=44.1
Q ss_pred HccCCCeEEEcCCCCcc------hHHHHHHhhhcCCcEEEEeCCC----------C---HHHHHHhhcCCCeEEEEEeCC
Q 013019 245 LVPAGGHIVTTTDCYRK------TRIFIETVLPKMGITATVIDPA----------D---MEGLEAALNNNNVSLFFTESP 305 (451)
Q Consensus 245 ll~~GD~VIv~~~~Y~~------t~~~l~~~l~~~Gi~v~~vd~~----------D---~d~Le~ai~~~~tklV~lesP 305 (451)
.+++||+|-+..|..+. ........++.+|.++.+-+.. | .++|.+++.+..+++|+...-
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 36789998888887542 1222234567789998875421 1 567888887667999997544
Q ss_pred CCCccccc
Q 013019 306 TNPFLRCV 313 (451)
Q Consensus 306 sNPtG~v~ 313 (451)
..-+.++.
T Consensus 88 G~g~~rlL 95 (327)
T 4h1h_A 88 GFNSNQLL 95 (327)
T ss_dssp CSCGGGGG
T ss_pred chhHHHHh
Confidence 43333443
No 281
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=36.55 E-value=1.4e+02 Score=27.40 Aligned_cols=60 Identities=17% Similarity=0.158 Sum_probs=39.7
Q ss_pred cCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcC-CEEEEecCCC
Q 013019 272 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-AIVCIDGTFA 336 (451)
Q Consensus 272 ~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g-~~lVVD~tfa 336 (451)
..|+++...|..|.+.++++++. ...|+...... .+.....+.+.|++.| +.-++=..++
T Consensus 54 ~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~a~~~---~~~~~~~l~~aa~~~g~v~~~v~S~~g 114 (307)
T 2gas_A 54 SLGVILLEGDINDHETLVKAIKQ--VDIVICAAGRL---LIEDQVKIIKAIKEAGNVKKFFPSEFG 114 (307)
T ss_dssp HTTCEEEECCTTCHHHHHHHHTT--CSEEEECSSSS---CGGGHHHHHHHHHHHCCCSEEECSCCS
T ss_pred hCCCEEEEeCCCCHHHHHHHHhC--CCEEEECCccc---ccccHHHHHHHHHhcCCceEEeecccc
Confidence 45788888898899999999974 56666543321 1344567888888887 6444423344
No 282
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=36.47 E-value=3.2e+02 Score=26.82 Aligned_cols=110 Identities=20% Similarity=0.180 Sum_probs=57.7
Q ss_pred HHHccCCCeEEEcCCCCcch---HHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEe-CCCCCc------cc-
Q 013019 243 LALVPAGGHIVTTTDCYRKT---RIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTE-SPTNPF------LR- 311 (451)
Q Consensus 243 ~all~~GD~VIv~~~~Y~~t---~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~le-sPsNPt------G~- 311 (451)
..++..|=.+|+-+..++.. ...++.+.+.+++.+..-...+.+..+.+++.. ...|.+. .|.... |.
T Consensus 111 ~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aG-aD~I~VG~~~Gs~~~tr~~~g~g 189 (361)
T 3khj_A 111 KLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENG-ADGIKVGIGPGSICTTRIVAGVG 189 (361)
T ss_dssp HHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTT-CSEEEECSSCCTTCCHHHHTCBC
T ss_pred HHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcC-cCEEEEecCCCcCCCcccccCCC
Confidence 34455563344433344432 233433334456666533445677777777653 6777662 122111 11
Q ss_pred ccc---HHHHHHHHHhcCCEEEEecCCCCCC-ccccccCCCcEEEE
Q 013019 312 CVD---VKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLH 353 (451)
Q Consensus 312 v~D---L~~IaelA~~~g~~lVVD~tfa~~~-~~~pl~~GaDiVv~ 353 (451)
..+ +.++.+++++.++++|.|.=..++- ..+.+.+|+|.|+-
T Consensus 190 ~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~v 235 (361)
T 3khj_A 190 VPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMI 235 (361)
T ss_dssp CCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred CCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 123 3455555677899999997543331 23455668886653
No 283
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=36.25 E-value=1.6e+02 Score=25.81 Aligned_cols=124 Identities=14% Similarity=0.203 Sum_probs=63.6
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE--EEEeCCCCH
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADM 285 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~--v~~vd~~D~ 285 (451)
-.|....+-..+....+....+=+++|+......+...++++.+|+..+..- ......+..+...|+. ++++.. |.
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~-~~~~~a~~~~~~~~~~~~v~~~~~-d~ 119 (221)
T 3u81_A 42 VGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINP-DCAAITQQMLNFAGLQDKVTILNG-AS 119 (221)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCH-HHHHHHHHHHHHHTCGGGEEEEES-CH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCh-HHHHHHHHHHHHcCCCCceEEEEC-CH
Confidence 3455555555566666667777788777555554444455677777766432 2233333444444432 444332 44
Q ss_pred HHHHHhhcC----CCeEEEEEeCCCCCccccccHHHHHHHHH--hcCCEEEEecCCC
Q 013019 286 EGLEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCH--KKGAIVCIDGTFA 336 (451)
Q Consensus 286 d~Le~ai~~----~~tklV~lesPsNPtG~v~DL~~IaelA~--~~g~~lVVD~tfa 336 (451)
.++...+.. ....+|++.... ....+..++.+.++ +.|..+++|+...
T Consensus 120 ~~~l~~~~~~~~~~~fD~V~~d~~~---~~~~~~~~~~~~~~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 120 QDLIPQLKKKYDVDTLDMVFLDHWK---DRYLPDTLLLEKCGLLRKGTVLLADNVIV 173 (221)
T ss_dssp HHHGGGTTTTSCCCCCSEEEECSCG---GGHHHHHHHHHHTTCCCTTCEEEESCCCC
T ss_pred HHHHHHHHHhcCCCceEEEEEcCCc---ccchHHHHHHHhccccCCCeEEEEeCCCC
Confidence 333223321 236788885432 12222222332222 2467888888754
No 284
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=36.09 E-value=2.1e+02 Score=28.07 Aligned_cols=80 Identities=14% Similarity=0.081 Sum_probs=44.7
Q ss_pred CCeEEEcCCCCcchHHHHHHhhhcCCcE---EEEeCCCCHHHH-HHh------hcCCCeEEEEEeCCCCCcc------cc
Q 013019 249 GGHIVTTTDCYRKTRIFIETVLPKMGIT---ATVIDPADMEGL-EAA------LNNNNVSLFFTESPTNPFL------RC 312 (451)
Q Consensus 249 GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~---v~~vd~~D~d~L-e~a------i~~~~tklV~lesPsNPtG------~v 312 (451)
|..++.-+....-... .++++|+. +.+..+.+.+++ .+. +++.++++|++.+.+...- ..
T Consensus 58 g~~vlyId~E~s~~~~----ra~~lGvd~d~llv~~~~~~E~~~l~i~~~l~~i~~~~~~lvVIDSI~aL~~~~eieg~~ 133 (333)
T 3io5_A 58 DAVCLFYDSEFGITPA----YLRSMGVDPERVIHTPVQSLEQLRIDMVNQLDAIERGEKVVVFIDSLGNLASKKETEDAL 133 (333)
T ss_dssp TCEEEEEESSCCCCHH----HHHHTTCCGGGEEEEECSBHHHHHHHHHHHHHTCCTTCCEEEEEECSTTCBCC-------
T ss_pred CceEEEEeccchhhHH----HHHHhCCCHHHeEEEcCCCHHHHHHHHHHHHHHhhccCceEEEEecccccccchhccCcc
Confidence 6677766655443222 23445543 333344455554 222 4555689999999886541 11
Q ss_pred --------c-------cHHHHHHHHHhcCCEEEEe
Q 013019 313 --------V-------DVKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 313 --------~-------DL~~IaelA~~~g~~lVVD 332 (451)
. -+.+|..+++++|+.+++=
T Consensus 134 gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i~vi~t 168 (333)
T 3io5_A 134 NEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIAI 168 (333)
T ss_dssp -------CTHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 1 1345666789999887653
No 285
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=35.79 E-value=94 Score=30.32 Aligned_cols=61 Identities=18% Similarity=0.171 Sum_probs=42.2
Q ss_pred ccCCCeEEEcCCCCcch---HHHH---HHhhhcCCcEEEEeCCC----------C---HHHHHHhhcCCCeEEEEEeCCC
Q 013019 246 VPAGGHIVTTTDCYRKT---RIFI---ETVLPKMGITATVIDPA----------D---MEGLEAALNNNNVSLFFTESPT 306 (451)
Q Consensus 246 l~~GD~VIv~~~~Y~~t---~~~l---~~~l~~~Gi~v~~vd~~----------D---~d~Le~ai~~~~tklV~lesPs 306 (451)
+++||+|-+..|..+.. ...+ ...++.+|.++.+-+.. | .++|.+++.+..+++|+...-.
T Consensus 9 L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (331)
T 4e5s_A 9 LKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGG 88 (331)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 68899999888887653 2223 23567789999875421 2 5678788876669999975544
No 286
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=35.51 E-value=2.1e+02 Score=24.42 Aligned_cols=101 Identities=11% Similarity=0.058 Sum_probs=53.9
Q ss_pred HHHHHHHhhhCCCcEEEeCCHHHHHHHHHH--HHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHh
Q 013019 214 VVEEKMSALEGAESTVIMASGMSASTVMLL--ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAA 291 (451)
Q Consensus 214 ~Lee~LA~l~gae~~vv~sSG~aAi~~al~--all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~a 291 (451)
.+++.+..+.+++..++++.|.+...+... -+.+-|-++....+. . ...
T Consensus 26 ~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~-------------------------~----~~~ 76 (186)
T 1m3s_A 26 EADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEI-------------------------L----TPP 76 (186)
T ss_dssp HHHHHHHHHHHCSCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTST-------------------------T----CCC
T ss_pred HHHHHHHHHHcCCeEEEEecCHHHHHHHHHHHHHHhcCCeEEEeCcc-------------------------c----ccC
Confidence 455555555567788999999864433221 122334333332111 0 112
Q ss_pred hcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEE--EecCCCCCCccccccCCCcEEEEC
Q 013019 292 LNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC--IDGTFATPLNQKALSLGADLVLHS 354 (451)
Q Consensus 292 i~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lV--VD~tfa~~~~~~pl~~GaDiVv~S 354 (451)
++++ .-+|++ +. .|...++-++++.|+++|+.+| .|+. ..++...+|+++.-
T Consensus 77 ~~~~-d~vI~i-S~---sG~t~~~~~~~~~ak~~g~~vi~IT~~~------~s~l~~~ad~~l~~ 130 (186)
T 1m3s_A 77 LAEG-DLVIIG-SG---SGETKSLIHTAAKAKSLHGIVAALTINP------ESSIGKQADLIIRM 130 (186)
T ss_dssp CCTT-CEEEEE-CS---SSCCHHHHHHHHHHHHTTCEEEEEESCT------TSHHHHHCSEEEEC
T ss_pred CCCC-CEEEEE-cC---CCCcHHHHHHHHHHHHCCCEEEEEECCC------CCchHHhCCEEEEe
Confidence 3443 334444 33 4666778888999999997654 3321 23444447877753
No 287
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=35.32 E-value=1.1e+02 Score=32.21 Aligned_cols=118 Identities=19% Similarity=0.150 Sum_probs=68.0
Q ss_pred HHHHccCCCeEEEcCCCCcchHHHHH---HhhhcC-CcEEEEeCCCCHHHHHHhhcCCCeEEEEEe-CCCCC------cc
Q 013019 242 LLALVPAGGHIVTTTDCYRKTRIFIE---TVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTNP------FL 310 (451)
Q Consensus 242 l~all~~GD~VIv~~~~Y~~t~~~l~---~~l~~~-Gi~v~~vd~~D~d~Le~ai~~~~tklV~le-sPsNP------tG 310 (451)
+.+|++.|--+|+-+..++.....++ .+-..+ .+.+.--...+.+..+..++.. ...|-+- -|... +|
T Consensus 286 ~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aG-AD~vkVGiGpGSiCtTr~v~G 364 (556)
T 4af0_A 286 LKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAG-ADGLRIGMGSGSICITQEVMA 364 (556)
T ss_dssp HHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHT-CSEEEECSSCSTTBCCTTTCC
T ss_pred HHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcC-CCEEeecCCCCcccccccccC
Confidence 35677888667777778876544332 222222 4555443445677776666543 4455431 22221 22
Q ss_pred cccc----HHHHHHHHHhcCCEEEEecCCCC-CCccccccCCCcEEEECCcccCCcc
Q 013019 311 RCVD----VKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFIGGH 362 (451)
Q Consensus 311 ~v~D----L~~IaelA~~~g~~lVVD~tfa~-~~~~~pl~~GaDiVv~S~SK~l~G~ 362 (451)
.-.+ +.+.++.++++|+++|.|.=.-. +-..+.+..|||.|+- .-+|+|+
T Consensus 365 vG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMl--GsllAGt 419 (556)
T 4af0_A 365 VGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAVMM--GGLLAGT 419 (556)
T ss_dssp SCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEE--STTTTTB
T ss_pred CCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEEEE--chhhccc
Confidence 2222 45667778889999999986432 2335677889998883 3444444
No 288
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=35.26 E-value=1.1e+02 Score=29.93 Aligned_cols=73 Identities=16% Similarity=0.023 Sum_probs=46.1
Q ss_pred ccCCCeEEEcCCCCcch------HHHHHHhhhcCCcEEEEeCCC----------C---HHHHHHhhcCCCeEEEEEeCCC
Q 013019 246 VPAGGHIVTTTDCYRKT------RIFIETVLPKMGITATVIDPA----------D---MEGLEAALNNNNVSLFFTESPT 306 (451)
Q Consensus 246 l~~GD~VIv~~~~Y~~t------~~~l~~~l~~~Gi~v~~vd~~----------D---~d~Le~ai~~~~tklV~lesPs 306 (451)
+++||+|-+..|..+.. .......++.+|.++.+-+.. | .++|.+++.+..+++|+...-.
T Consensus 10 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG 89 (336)
T 3sr3_A 10 LKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGG 89 (336)
T ss_dssp CCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 67899999888887642 112223567789998875421 2 5678788876569999975544
Q ss_pred CCcccc---ccHHHH
Q 013019 307 NPFLRC---VDVKLV 318 (451)
Q Consensus 307 NPtG~v---~DL~~I 318 (451)
.-+.++ .|.+.|
T Consensus 90 ~g~~rlL~~lD~~~i 104 (336)
T 3sr3_A 90 MNSNSLLPYIDYDAF 104 (336)
T ss_dssp SCGGGGGGGSCHHHH
T ss_pred ccHHHHhhhcChhHH
Confidence 333333 345544
No 289
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=34.98 E-value=35 Score=29.16 Aligned_cols=59 Identities=12% Similarity=0.162 Sum_probs=37.8
Q ss_pred CCcEEEEeCCCC---HHHHHHhhcCCCeEEEEEeCCC--CCccccccHHHHHHHHHhcCCEEEEe
Q 013019 273 MGITATVIDPAD---MEGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 273 ~Gi~v~~vd~~D---~d~Le~ai~~~~tklV~lesPs--NPtG~v~DL~~IaelA~~~g~~lVVD 332 (451)
.|++++.+.... -..+.+.|.+.++.+|+. +|. ++.....|...|.+.|-+++++++..
T Consensus 48 ~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVIn-t~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 48 TGLTVEKLLSGPLGGDQQMGARVAEGRILAVIF-FRDPLTAQPHEPDVQALLRVCDVHGVPLATN 111 (134)
T ss_dssp HCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEE-ECCTTTCCTTSCCSHHHHHHHHHHTCCEECS
T ss_pred hCceEEEEEecCCCCcchHHHHHHCCCccEEEE-ccCcccCCCccchHHHHHHHHHHcCCCeEcC
Confidence 466666553211 124666777666777665 444 43332568999999999999998653
No 290
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=34.77 E-value=1.3e+02 Score=28.15 Aligned_cols=76 Identities=13% Similarity=0.145 Sum_probs=41.2
Q ss_pred EEEeCCHHHHH-HHHHHHHccCCCeEEEcCCCCcchHHHHHHhhh--cCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEe
Q 013019 228 TVIMASGMSAS-TVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP--KMGITATVIDPADMEGLEAALNNNNVSLFFTE 303 (451)
Q Consensus 228 ~vv~sSG~aAi-~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~--~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~le 303 (451)
.+++++|+.-| ..+...|++.|.+|++.+..-............ ..++.+...|..|.+.++++++..++..|+-.
T Consensus 7 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 85 (341)
T 3enk_A 7 TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHF 85 (341)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred EEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEEC
Confidence 34444444322 233456777898888765433322222222211 22455555677899999998874235566543
No 291
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=34.71 E-value=87 Score=27.26 Aligned_cols=76 Identities=14% Similarity=0.110 Sum_probs=45.2
Q ss_pred CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCC---HHHHHHhhcCCCeEEEEEeCCC--CCccccccHHHHHHHHH
Q 013019 249 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD---MEGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCH 323 (451)
Q Consensus 249 GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D---~d~Le~ai~~~~tklV~lesPs--NPtG~v~DL~~IaelA~ 323 (451)
|=+++... +|..+++. ..|++++.+.... -.++.+.|.+.++.+|+. +|. ++.....|...|.+.|-
T Consensus 39 Gf~l~AT~----gTa~~L~e---~~Gl~v~~v~k~~eGG~p~I~d~I~~geIdlVIn-t~~pl~~~~h~~D~~~IrR~A~ 110 (152)
T 1b93_A 39 QHVLYATG----TTGNLISR---ATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIF-FWDPLNAVPHDPDVKALLRLAT 110 (152)
T ss_dssp TSEEEEET----THHHHHHH---HHCCCCEEECCGGGTHHHHHHHHHHTTCCCEEEE-ECCTTSCCTTHHHHHHHHHHHH
T ss_pred CCEEEEcc----HHHHHHHH---HhCceeEEEEecCCCCCchHHHHHHCCCccEEEE-cCCcccCCcccccHHHHHHHHH
Confidence 55565543 45543322 1466666554211 125666777666777765 444 32222458899999999
Q ss_pred hcCCEEEEe
Q 013019 324 KKGAIVCID 332 (451)
Q Consensus 324 ~~g~~lVVD 332 (451)
++|++++.-
T Consensus 111 ~~~IP~~T~ 119 (152)
T 1b93_A 111 VWNIPVATN 119 (152)
T ss_dssp HTTCCEESS
T ss_pred HcCCCEEeC
Confidence 999998754
No 292
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=34.17 E-value=25 Score=35.86 Aligned_cols=31 Identities=10% Similarity=0.009 Sum_probs=27.0
Q ss_pred CCCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 305 PsNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
+..-.|+..|+++|++.||++|+.||+|-++
T Consensus 71 id~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 101 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSRNVQVYGDVVL 101 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3444788899999999999999999999985
No 293
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=33.47 E-value=1.3e+02 Score=28.08 Aligned_cols=108 Identities=14% Similarity=0.069 Sum_probs=56.0
Q ss_pred HHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEE-EeCC-CCHHHHHHhhcCCCeEEEEEeCCCCCccccc----c-
Q 013019 243 LALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITAT-VIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCV----D- 314 (451)
Q Consensus 243 ~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~-~vd~-~D~d~Le~ai~~~~tklV~lesPsNPtG~v~----D- 314 (451)
..+...| |-|++++-.+.....+. ..++..|++.. ++.+ .+.+.++...... ...+++.+....||... +
T Consensus 116 ~~~~~aGadgii~~d~~~e~~~~~~-~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~-~g~v~~~s~~G~tG~~~~~~~~~ 193 (268)
T 1qop_A 116 ARCEQVGVDSVLVADVPVEESAPFR-QAALRHNIAPIFICPPNADDDLLRQVASYG-RGYTYLLSRSGVTGAENRGALPL 193 (268)
T ss_dssp HHHHHHTCCEEEETTCCGGGCHHHH-HHHHHTTCEEECEECTTCCHHHHHHHHHHC-CSCEEEESSSSCCCSSSCC--CC
T ss_pred HHHHHcCCCEEEEcCCCHHHHHHHH-HHHHHcCCcEEEEECCCCCHHHHHHHHhhC-CCcEEEEecCCcCCCccCCCchH
Confidence 3344444 66888776654433333 45566777643 3333 3455555544432 23456556555667532 2
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCCCcccc-ccCCCcEEE
Q 013019 315 VKLVSDLCHKKGAIVCIDGTFATPLNQKA-LSLGADLVL 352 (451)
Q Consensus 315 L~~IaelA~~~g~~lVVD~tfa~~~~~~p-l~~GaDiVv 352 (451)
.+.|.++.+..++++++|.=..++-.... +..|+|.++
T Consensus 194 ~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vV 232 (268)
T 1qop_A 194 HHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAI 232 (268)
T ss_dssp HHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 34455544444778888754333322222 456777554
No 294
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=33.04 E-value=48 Score=30.78 Aligned_cols=128 Identities=13% Similarity=0.131 Sum_probs=64.3
Q ss_pred cccCCCchhHHHHHHHHHh-hh--C---CCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcE
Q 013019 203 EYGRYGNPTTVVVEEKMSA-LE--G---AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (451)
Q Consensus 203 ~Y~R~~npt~~~Lee~LA~-l~--g---ae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~ 276 (451)
.|-++ ||.+..|...|-. +. + ++.++-+++|+......+.-.+.+..+|+..+..-.....+.+...+.-++.
T Consensus 51 e~r~w-~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~ 129 (233)
T 4df3_A 51 EYREW-NAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIF 129 (233)
T ss_dssp EEEEC-CTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEE
T ss_pred eeeeE-CCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCee
Confidence 35433 5777666555433 11 1 2456667777755555555567777888887755443333322222233566
Q ss_pred EEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC
Q 013019 277 ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 277 v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t 334 (451)
....+..+++...... . ...+||...+. |--...-++++..+.+.-|.+++++..
T Consensus 130 ~V~~d~~~p~~~~~~~-~-~vDvVf~d~~~-~~~~~~~l~~~~r~LKpGG~lvI~ik~ 184 (233)
T 4df3_A 130 PILGDARFPEKYRHLV-E-GVDGLYADVAQ-PEQAAIVVRNARFFLRDGGYMLMAIKA 184 (233)
T ss_dssp EEESCTTCGGGGTTTC-C-CEEEEEECCCC-TTHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEeccCcccccccc-c-eEEEEEEeccC-ChhHHHHHHHHHHhccCCCEEEEEEec
Confidence 5555655555433222 2 36777765443 211001123333333445666666654
No 295
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=33.04 E-value=28 Score=33.22 Aligned_cols=71 Identities=25% Similarity=0.315 Sum_probs=41.5
Q ss_pred CeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC------C---CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHH
Q 013019 250 GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (451)
Q Consensus 250 D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~------~---D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~Iae 320 (451)
..+++..+.|+- +++.+|++...+.. . ++.+|.+.++++++++||.|.-.+| --.+.|.+
T Consensus 164 ~~~vt~H~af~Y-------~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~----~~~~~l~~ 232 (282)
T 3mfq_A 164 RYLVTPHDAFNY-------FAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAIFTESTTNP----ERMKKLQE 232 (282)
T ss_dssp CEEECSSSCCHH-------HHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEEECBTTSCT----HHHHHHHH
T ss_pred cEEEEECchHHH-------HHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh----HHHHHHHH
Confidence 345554555542 34567777543221 1 3445555565556889998754432 12567888
Q ss_pred HHHhcCCEEEE
Q 013019 321 LCHKKGAIVCI 331 (451)
Q Consensus 321 lA~~~g~~lVV 331 (451)
+|++.|+.+++
T Consensus 233 ~a~~~g~~v~~ 243 (282)
T 3mfq_A 233 AVKAKGGQVEV 243 (282)
T ss_dssp HHHTTSCCCEE
T ss_pred HHHhcCCceEE
Confidence 89998876554
No 296
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=32.92 E-value=74 Score=30.17 Aligned_cols=99 Identities=13% Similarity=0.092 Sum_probs=58.0
Q ss_pred eEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEE
Q 013019 251 HIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV 329 (451)
Q Consensus 251 ~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~l 329 (451)
+|++.+..|.+....+..+.+..++.+..-|. .|..+++.+..-. ...|++-.. .+...+++++.+.|++.|..+
T Consensus 90 svltd~~~f~Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~G-AD~VlLi~a---~l~~~~l~~l~~~a~~lGl~~ 165 (272)
T 3qja_A 90 SVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHG-ADMLLLIVA---ALEQSVLVSMLDRTESLGMTA 165 (272)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEEEGG---GSCHHHHHHHHHHHHHTTCEE
T ss_pred EEecChhhcCCCHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcC-CCEEEEecc---cCCHHHHHHHHHHHHHCCCcE
Confidence 45555555566566665554445555554443 3555666666543 567766322 233346888899999999988
Q ss_pred EEecCCCCCCccccccCCCcEEEEC
Q 013019 330 CIDGTFATPLNQKALSLGADLVLHS 354 (451)
Q Consensus 330 VVD~tfa~~~~~~pl~~GaDiVv~S 354 (451)
+++-.-.. -.....+.|+|++...
T Consensus 166 lvev~t~e-e~~~A~~~Gad~IGv~ 189 (272)
T 3qja_A 166 LVEVHTEQ-EADRALKAGAKVIGVN 189 (272)
T ss_dssp EEEESSHH-HHHHHHHHTCSEEEEE
T ss_pred EEEcCCHH-HHHHHHHCCCCEEEEC
Confidence 88753211 1223446688876654
No 297
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=32.86 E-value=27 Score=35.70 Aligned_cols=30 Identities=10% Similarity=0.036 Sum_probs=26.5
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
..-.|+..|+++|++.||++|+.||+|-++
T Consensus 76 dp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 105 (485)
T 1wpc_A 76 RTKYGTRSQLQAAVTSLKNNGIQVYGDVVM 105 (485)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 334788899999999999999999999985
No 298
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=32.68 E-value=27 Score=35.60 Aligned_cols=28 Identities=7% Similarity=-0.079 Sum_probs=25.8
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
-.|+..|+++|++.||++|+.||+|-++
T Consensus 76 ~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 103 (480)
T 1ud2_A 76 KYGTKAQLERAIGSLKSNDINVYGDVVM 103 (480)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 4788899999999999999999999985
No 299
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=32.48 E-value=1.9e+02 Score=25.94 Aligned_cols=42 Identities=14% Similarity=0.169 Sum_probs=26.7
Q ss_pred ccccccHHHHHHHHHh--cCCEEEEecCCCCCCccccccCCCcEEEEC
Q 013019 309 FLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLHS 354 (451)
Q Consensus 309 tG~v~DL~~IaelA~~--~g~~lVVD~tfa~~~~~~pl~~GaDiVv~S 354 (451)
.|...++-++++.|++ .|+.+|.=-. ....++..-+|+++..
T Consensus 116 SG~t~~~i~~~~~ak~~~~Ga~vI~IT~----~~~s~La~~aD~~l~~ 159 (220)
T 3etn_A 116 SGKTREIVELTQLAHNLNPGLKFIVITG----NPDSPLASESDVCLST 159 (220)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCEEEEEES----CTTSHHHHHSSEEEEC
T ss_pred CCCCHHHHHHHHHHHhcCCCCeEEEEEC----CCCChhHHhCCEEEEc
Confidence 4677788889999999 9977653111 1123444447877764
No 300
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=32.47 E-value=2.6e+02 Score=27.28 Aligned_cols=110 Identities=6% Similarity=0.043 Sum_probs=54.2
Q ss_pred HHHHhhhCCCcEEEeC-CHHHHHHHHHHHHccCC-CeEEEcCCCCcchHHHHHHhhhc-----CCcEEEEeCCCCHHHHH
Q 013019 217 EKMSALEGAESTVIMA-SGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPK-----MGITATVIDPADMEGLE 289 (451)
Q Consensus 217 e~LA~l~gae~~vv~s-SG~aAi~~al~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~-----~Gi~v~~vd~~D~d~Le 289 (451)
+.+.........++++ +|.-+ ..+...|++.| .+|++.+..-.........+... .++.+...|..|.+.++
T Consensus 27 ~~~~~~~~~k~vLVTGatG~IG-~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~ 105 (399)
T 3nzo_A 27 KELQSVVSQSRFLVLGGAGSIG-QAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDA 105 (399)
T ss_dssp HHHHHHHHTCEEEEETTTSHHH-HHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHH
T ss_pred HHHHHHhCCCEEEEEcCChHHH-HHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHH
Confidence 3344444334455554 33322 23345667778 57777654322222222222111 23444445777888777
Q ss_pred HhhcCCCeEEEEEeCCCCCcccccc--------------HHHHHHHHHhcCC
Q 013019 290 AALNNNNVSLFFTESPTNPFLRCVD--------------VKLVSDLCHKKGA 327 (451)
Q Consensus 290 ~ai~~~~tklV~lesPsNPtG~v~D--------------L~~IaelA~~~g~ 327 (451)
.++...++..|+-...........+ ...+.+.|+++|+
T Consensus 106 ~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv 157 (399)
T 3nzo_A 106 FIKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGA 157 (399)
T ss_dssp HHHHCCCCSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred HHHHhCCCCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7765334666665432211111111 2367888888885
No 301
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=32.26 E-value=28 Score=35.17 Aligned_cols=29 Identities=17% Similarity=0.107 Sum_probs=26.1
Q ss_pred CCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 307 NPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 307 NPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
...|+..|++++++-||++|+.||+|-++
T Consensus 81 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 81 TRFGSKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 34688899999999999999999999985
No 302
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=32.23 E-value=1.8e+02 Score=24.71 Aligned_cols=103 Identities=14% Similarity=0.055 Sum_probs=55.1
Q ss_pred HHHHHHHHhhhCCCcEEEeCCHHHHHHHHHH--HHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHH
Q 013019 213 VVVEEKMSALEGAESTVIMASGMSASTVMLL--ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEA 290 (451)
Q Consensus 213 ~~Lee~LA~l~gae~~vv~sSG~aAi~~al~--all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ 290 (451)
+.+++.+..+..++..++++.|.+...+... -+.+-|..+....+. . ..
T Consensus 28 ~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~---------------------------~--~~ 78 (180)
T 1jeo_A 28 NKLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGET---------------------------T--TP 78 (180)
T ss_dssp HHHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHTTCCEEETTST---------------------------T--CC
T ss_pred HHHHHHHHHHHhCCEEEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCC---------------------------c--cc
Confidence 4455555556667889999999855433221 122334444332111 0 01
Q ss_pred hhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEE--EEecCCCCCCccccccCCCcEEEECCc
Q 013019 291 ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV--CIDGTFATPLNQKALSLGADLVLHSAT 356 (451)
Q Consensus 291 ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~l--VVD~tfa~~~~~~pl~~GaDiVv~S~S 356 (451)
.++++ .-+|++ + ..|...++-++++.|+++|+.+ |.|+. .. +...+|+++...+
T Consensus 79 ~~~~~-d~vi~i-S---~sG~t~~~~~~~~~ak~~g~~vi~IT~~~------~s-l~~~ad~~l~~~~ 134 (180)
T 1jeo_A 79 SYEKD-DLLILI-S---GSGRTESVLTVAKKAKNINNNIIAIVCEC------GN-VVEFADLTIPLEV 134 (180)
T ss_dssp CCCTT-CEEEEE-E---SSSCCHHHHHHHHHHHTTCSCEEEEESSC------CG-GGGGCSEEEECCC
T ss_pred cCCCC-CEEEEE-e---CCCCcHHHHHHHHHHHHCCCcEEEEeCCC------Ch-HHHhCCEEEEeCC
Confidence 23343 334444 2 2366677888899999998654 33332 12 3334787776443
No 303
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=32.22 E-value=27 Score=36.05 Aligned_cols=30 Identities=17% Similarity=0.133 Sum_probs=26.5
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
..-.|...|++++++.||++|+.||+|-++
T Consensus 75 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 75 RTKYGTKAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 334788899999999999999999999985
No 304
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=31.67 E-value=2.5e+02 Score=24.13 Aligned_cols=56 Identities=11% Similarity=-0.038 Sum_probs=32.6
Q ss_pred HhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCC---CcEEEEC
Q 013019 290 AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG---ADLVLHS 354 (451)
Q Consensus 290 ~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~G---aDiVv~S 354 (451)
..++++ .-+|++ + ..|...++-++++.|+++|+.+|.=- .....++..- +|+++.-
T Consensus 105 ~~~~~~-DvvI~i-S---~SG~t~~~i~~~~~ak~~g~~vI~IT----~~~~s~la~~~~~ad~~l~~ 163 (196)
T 2yva_A 105 ALGHAG-DVLLAI-S---TRGNSRDIVKAVEAAVTRDMTIVALT----GYDGGELAGLLGPQDVEIRI 163 (196)
T ss_dssp HHCCTT-CEEEEE-C---SSSCCHHHHHHHHHHHHTTCEEEEEE----CTTCHHHHTTCCTTSEEEEC
T ss_pred hcCCCC-CEEEEE-e---CCCCCHHHHHHHHHHHHCCCEEEEEe----CCCCchhhhcccCCCEEEEe
Confidence 445554 334444 2 34777788889999999998754311 1112333333 7877754
No 305
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=30.93 E-value=1e+02 Score=31.14 Aligned_cols=88 Identities=10% Similarity=0.061 Sum_probs=63.5
Q ss_pred HccCCCeEEEcCCCCcchHHHHHHhhhcC--CcEEEEeCC--CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHH
Q 013019 245 LVPAGGHIVTTTDCYRKTRIFIETVLPKM--GITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (451)
Q Consensus 245 ll~~GD~VIv~~~~Y~~t~~~l~~~l~~~--Gi~v~~vd~--~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~Iae 320 (451)
++.+-+-+.+.+|.....+..+..+.+.. .+++.--+. .+.+.+++.++.+-..+|.+. -|-.|.+....++++
T Consensus 284 ~l~~y~i~~iEdPl~~~D~~g~~~l~~~~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i~ik--~~~~GGitea~~i~~ 361 (432)
T 2ptz_A 284 WAHDYPIVSIEDPYDQDDFAGFAGITEALKGKTQIVGDDLTVTNTERIKMAIEKKACNSLLLK--INQIGTISEAIASSK 361 (432)
T ss_dssp HHHHSCEEEEECCSCTTCHHHHHHHHHHTTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC--HHHHCCHHHHHHHHH
T ss_pred HHHhCCceEEECCCCcchHHHHHHHHHhcCCCCeEEecCcccCCHHHHHHHHHcCCCCEEEec--ccccCCHHHHHHHHH
Confidence 44555688999998877666666666666 567733333 578889998876545666653 245788889999999
Q ss_pred HHHhcCCEEEEecC
Q 013019 321 LCHKKGAIVCIDGT 334 (451)
Q Consensus 321 lA~~~g~~lVVD~t 334 (451)
+|+++|+.+++=..
T Consensus 362 lA~~~g~~v~~~h~ 375 (432)
T 2ptz_A 362 LCMENGWSVMVSHR 375 (432)
T ss_dssp HHHHTTCEEEEECC
T ss_pred HHHHcCCeEEecCC
Confidence 99999999977543
No 306
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=30.52 E-value=1e+02 Score=30.45 Aligned_cols=77 Identities=13% Similarity=0.088 Sum_probs=56.0
Q ss_pred CeEEEcCCCCcchHHHHHHhhhcC-CcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCE
Q 013019 250 GHIVTTTDCYRKTRIFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAI 328 (451)
Q Consensus 250 D~VIv~~~~Y~~t~~~l~~~l~~~-Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~ 328 (451)
+-..+..|........+..+.+.. ++.+-..+..+.+++++.++.....+|.+. |-+....+++++|+++|+.
T Consensus 219 ~i~~iEqP~~~~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik------GGit~a~~i~~~A~~~gi~ 292 (389)
T 2oz8_A 219 DLLWVEDPILRHDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAADILNVH------GQVTDVMRIGWLAAELGIP 292 (389)
T ss_dssp CCSEEESCBCTTCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCSEEEEC------SCHHHHHHHHHHHHHHTCC
T ss_pred CceEEeCCCCCcCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCCEEEEC------cCHHHHHHHHHHHHHcCCe
Confidence 344667776544455555555566 677765443378899998876557788774 8888889999999999999
Q ss_pred EEEe
Q 013019 329 VCID 332 (451)
Q Consensus 329 lVVD 332 (451)
+++=
T Consensus 293 ~~~~ 296 (389)
T 2oz8_A 293 ISIG 296 (389)
T ss_dssp EEEC
T ss_pred Eeec
Confidence 8887
No 307
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=30.46 E-value=31 Score=35.74 Aligned_cols=29 Identities=10% Similarity=0.005 Sum_probs=26.4
Q ss_pred CCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 307 NPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 307 NPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
...|...|+++|++-||++|+.||+|-++
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 115 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVVP 115 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 45789999999999999999999999885
No 308
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=30.15 E-value=26 Score=35.90 Aligned_cols=28 Identities=7% Similarity=0.080 Sum_probs=25.7
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
-.|+..|+++|++.||++|+.||.|-++
T Consensus 75 ~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 75 QYGTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3788899999999999999999999985
No 309
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=30.01 E-value=2.3e+02 Score=27.68 Aligned_cols=89 Identities=7% Similarity=0.018 Sum_probs=62.1
Q ss_pred ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHh
Q 013019 246 VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK 324 (451)
Q Consensus 246 l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd-~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~ 324 (451)
+.+-+-..+..|........+..+.+..++.+-.-+ ..+.+++++.++.....+|.+. ++ -.|-+....+|+++|++
T Consensus 211 l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k-~~-~~GGit~~~~i~~~A~~ 288 (370)
T 1chr_A 211 LEALGVELIEQPVGRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLK-LC-NMGGVSATQKIAAVAEA 288 (370)
T ss_dssp HHTTTEEEEECCSCTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEEC-TT-TSCSHHHHHHHHHHHHH
T ss_pred HHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEEC-cc-ccCCHHHHHHHHHHHHH
Confidence 344456677788766555556555566677766433 2468888888876446777764 33 47888899999999999
Q ss_pred cCCEEEEecCCC
Q 013019 325 KGAIVCIDGTFA 336 (451)
Q Consensus 325 ~g~~lVVD~tfa 336 (451)
+|+.+++=..+.
T Consensus 289 ~g~~~~~~~~~e 300 (370)
T 1chr_A 289 SGIASYGGTMLD 300 (370)
T ss_dssp HTCEEEECCSCC
T ss_pred cCCeEEecCCCc
Confidence 999998765443
No 310
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=29.85 E-value=77 Score=31.78 Aligned_cols=90 Identities=18% Similarity=0.155 Sum_probs=53.8
Q ss_pred hhcCCcEEEEeCC--CCHHHHHHhhc----CCCeEEEEEeC-CC-CCc--cccccHHHHHHHHHhcCCEEEEecCCCCC-
Q 013019 270 LPKMGITATVIDP--ADMEGLEAALN----NNNVSLFFTES-PT-NPF--LRCVDVKLVSDLCHKKGAIVCIDGTFATP- 338 (451)
Q Consensus 270 l~~~Gi~v~~vd~--~D~d~Le~ai~----~~~tklV~les-Ps-NPt--G~v~DL~~IaelA~~~g~~lVVD~tfa~~- 338 (451)
+...|.++.+-.. .++++++.+++ ..+..+++++. .+ -|+ -...|+..|..+-+..+++|++|-|++.+
T Consensus 245 ~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G~ 324 (385)
T 3nvt_A 245 AGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTGR 324 (385)
T ss_dssp HHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHCC
T ss_pred HHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCCc
Confidence 3455666654332 35555555442 22346777765 22 233 24468999888877789999999997754
Q ss_pred ------CccccccCCCc-EEEE---CCcccC
Q 013019 339 ------LNQKALSLGAD-LVLH---SATKFI 359 (451)
Q Consensus 339 ------~~~~pl~~GaD-iVv~---S~SK~l 359 (451)
+..-...+|+| +++. ...|.+
T Consensus 325 r~~v~~~a~AAvA~GA~gl~iE~H~~pd~a~ 355 (385)
T 3nvt_A 325 KDLLLPCAKAALAIEADGVMAEVHPDPAVAL 355 (385)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEBCSCGGGCS
T ss_pred cchHHHHHHHHHHhCCCEEEEEecCChhhcC
Confidence 22334567998 3332 455665
No 311
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=29.79 E-value=1.6e+02 Score=26.85 Aligned_cols=84 Identities=12% Similarity=0.096 Sum_probs=48.3
Q ss_pred HccC-CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCC-CCc-cccccHHHHHHH
Q 013019 245 LVPA-GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT-NPF-LRCVDVKLVSDL 321 (451)
Q Consensus 245 ll~~-GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPs-NPt-G~v~DL~~Iael 321 (451)
|.+. |.+|++....-... ..+...++++...|..|.+.++++++. +..|+..... ++. ..+...+.+.+.
T Consensus 20 L~~~~g~~V~~~~R~~~~~-----~~~~~~~v~~~~~D~~d~~~l~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~l~~a 92 (289)
T 3e48_A 20 AIANHIDHFHIGVRNVEKV-----PDDWRGKVSVRQLDYFNQESMVEAFKG--MDTVVFIPSIIHPSFKRIPEVENLVYA 92 (289)
T ss_dssp HHHTTCTTEEEEESSGGGS-----CGGGBTTBEEEECCTTCHHHHHHHTTT--CSEEEECCCCCCSHHHHHHHHHHHHHH
T ss_pred HhhCCCCcEEEEECCHHHH-----HHhhhCCCEEEEcCCCCHHHHHHHHhC--CCEEEEeCCCCccchhhHHHHHHHHHH
Confidence 5555 77666643211110 112345788888899999999999974 5566654332 221 112335678888
Q ss_pred HHhcCC-EEEEecCC
Q 013019 322 CHKKGA-IVCIDGTF 335 (451)
Q Consensus 322 A~~~g~-~lVVD~tf 335 (451)
|++.|+ .+|.=.++
T Consensus 93 a~~~gv~~iv~~Ss~ 107 (289)
T 3e48_A 93 AKQSGVAHIIFIGYY 107 (289)
T ss_dssp HHHTTCCEEEEEEES
T ss_pred HHHcCCCEEEEEccc
Confidence 988885 34443333
No 312
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=29.76 E-value=2.9e+02 Score=28.08 Aligned_cols=96 Identities=9% Similarity=-0.001 Sum_probs=64.6
Q ss_pred HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcC--CcEEEEeCCC--CHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 236 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM--GITATVIDPA--DMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 236 aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~--Gi~v~~vd~~--D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+++.. +..++.+-+-+.+.+|.....+..+..+.+.. .+++.--+.. ++.++++.++..-..+|.+. -|-.|.
T Consensus 293 eai~~-~~~lle~y~i~~IEdPl~~dD~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iK--v~~iGG 369 (449)
T 3uj2_A 293 ELVAH-WKSLCERYPIVSIEDGLDEEDWEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIK--LNQIGT 369 (449)
T ss_dssp HHHHH-HHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC--HHHHCS
T ss_pred HHHHH-HHHHHHhcCceEEECCCCcchHHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEEC--ccccCC
Confidence 44433 23345555678889998776666666655555 4554433332 68899999876545666653 245788
Q ss_pred cccHHHHHHHHHhcCCEEEEecC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~t 334 (451)
+....+++++|+++|+.+++=-.
T Consensus 370 iTea~kia~lA~~~Gi~~~v~H~ 392 (449)
T 3uj2_A 370 VSETLEAIKMAHKAGYTAVVSHR 392 (449)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCeEEEeCC
Confidence 88999999999999999766443
No 313
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=29.70 E-value=1.6e+02 Score=29.65 Aligned_cols=97 Identities=8% Similarity=-0.041 Sum_probs=66.8
Q ss_pred HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcC--CcEEEEeC--CCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 236 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM--GITATVID--PADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 236 aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~--Gi~v~~vd--~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|+.. +..+...-+-..+.+|.....+..+..+.+.. .+++-.-+ ..+..++++.++..-..+|.+. + |-.|.
T Consensus 271 ~ai~~-~~~L~~~~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~ik-~-~~~GG 347 (431)
T 2fym_A 271 EFTHF-LEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIK-F-NQIGS 347 (431)
T ss_dssp HHHHH-HHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-G-GGTCS
T ss_pred HHHHH-HHHHHHhCCceEEECCCCcccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEEC-c-cccCC
Confidence 44433 34444434578889998876666665555555 56665434 2478899998876546677663 2 45788
Q ss_pred cccHHHHHHHHHhcCCEEEEecCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
+....+++++|+++|+.+++-...
T Consensus 348 ite~~~i~~~A~~~g~~~~~~h~~ 371 (431)
T 2fym_A 348 LTETLAAIKMAKDAGYTAVISHRS 371 (431)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCeEEEeCCC
Confidence 889999999999999999876544
No 314
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=29.49 E-value=1.4e+02 Score=27.75 Aligned_cols=59 Identities=19% Similarity=0.158 Sum_probs=41.9
Q ss_pred CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEE
Q 013019 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (451)
Q Consensus 282 ~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv 352 (451)
..+.++++.+++.. .+.|+ +|+ .-.++.+.|+++|++++-+.. ++ -....+++|+|++-
T Consensus 93 Vlt~~~a~~Ai~AG-A~fIv--sP~-------~~~~vi~~~~~~gi~~ipGv~--TptEi~~A~~~Gad~vK 152 (232)
T 4e38_A 93 ILNGEQALAAKEAG-ATFVV--SPG-------FNPNTVRACQEIGIDIVPGVN--NPSTVEAALEMGLTTLK 152 (232)
T ss_dssp CCSHHHHHHHHHHT-CSEEE--CSS-------CCHHHHHHHHHHTCEEECEEC--SHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHcC-CCEEE--eCC-------CCHHHHHHHHHcCCCEEcCCC--CHHHHHHHHHcCCCEEE
Confidence 45788898888764 56665 465 135788889999999999854 32 22456788999884
No 315
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=29.45 E-value=2.3e+02 Score=23.03 Aligned_cols=115 Identities=13% Similarity=0.100 Sum_probs=63.0
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCC
Q 013019 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (451)
Q Consensus 226 e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesP 305 (451)
.+.++++.|.-+...+ ..|.+.|-.|++-+..- ..++. +...|+.+...|..+.+.|+++--+ +.++|++..|
T Consensus 8 ~~viIiG~G~~G~~la-~~L~~~g~~v~vid~~~----~~~~~-~~~~g~~~i~gd~~~~~~l~~a~i~-~ad~vi~~~~ 80 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLG-EKLLASDIPLVVIETSR----TRVDE-LRERGVRAVLGNAANEEIMQLAHLE-CAKWLILTIP 80 (140)
T ss_dssp SCEEEECCSHHHHHHH-HHHHHTTCCEEEEESCH----HHHHH-HHHTTCEEEESCTTSHHHHHHTTGG-GCSEEEECCS
T ss_pred CCEEEECcCHHHHHHH-HHHHHCCCCEEEEECCH----HHHHH-HHHcCCCEEECCCCCHHHHHhcCcc-cCCEEEEECC
Confidence 4688888888555443 34556676666654322 22322 3346888877788888888775323 2678888666
Q ss_pred CCCccccccHHHHHHHHHhc--CCEEEEecCCCCCCccccccCCCcEEEE
Q 013019 306 TNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~--g~~lVVD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
+.. +-..++..+++. ++.+++=.. .......-..+|+|.++.
T Consensus 81 ~~~-----~n~~~~~~a~~~~~~~~iiar~~-~~~~~~~l~~~G~d~vi~ 124 (140)
T 3fwz_A 81 NGY-----EAGEIVASARAKNPDIEIIARAH-YDDEVAYITERGANQVVM 124 (140)
T ss_dssp CHH-----HHHHHHHHHHHHCSSSEEEEEES-SHHHHHHHHHTTCSEEEE
T ss_pred ChH-----HHHHHHHHHHHHCCCCeEEEEEC-CHHHHHHHHHCCCCEEEC
Confidence 521 122345556653 455443211 111111122467887764
No 316
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=29.21 E-value=28 Score=35.00 Aligned_cols=28 Identities=18% Similarity=0.199 Sum_probs=25.6
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
-.|+..|++++++.||++|+.||+|-++
T Consensus 65 ~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 65 EYGSEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3788899999999999999999999985
No 317
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=29.14 E-value=1.2e+02 Score=30.77 Aligned_cols=88 Identities=9% Similarity=0.024 Sum_probs=64.1
Q ss_pred HHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC--CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHH
Q 013019 244 ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDL 321 (451)
Q Consensus 244 all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~Iael 321 (451)
.++.+-+-+.+.+|.....+..+..+.+...+++.--+. .++.++++.|+..-...|.+. + |-.|.+.+..+++++
T Consensus 284 ~~l~~y~i~~iEdPl~~dD~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ik-v-~qiGGitea~~ia~l 361 (436)
T 2al1_A 284 SLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALLLK-V-NQIGTLSESIKAAQD 361 (436)
T ss_dssp HHHHHSCEEEEECCSCTTCHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-H-HHHCCHHHHHHHHHH
T ss_pred HHHHhCCcEEEECCCCCcCHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEEec-h-hhcCCHHHHHHHHHH
Confidence 345556688899998877776666666666777754443 378999999977545566552 2 457888899999999
Q ss_pred HHhcCCEEEEec
Q 013019 322 CHKKGAIVCIDG 333 (451)
Q Consensus 322 A~~~g~~lVVD~ 333 (451)
|+++|+.+++=-
T Consensus 362 A~~~g~~~~~sh 373 (436)
T 2al1_A 362 SFAAGWGVMVSH 373 (436)
T ss_dssp HHHTTCEEEEEC
T ss_pred HHHcCCeEEEec
Confidence 999999877643
No 318
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=29.12 E-value=1.4e+02 Score=30.32 Aligned_cols=88 Identities=11% Similarity=0.088 Sum_probs=64.1
Q ss_pred HHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC--CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHH
Q 013019 244 ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDL 321 (451)
Q Consensus 244 all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~Iael 321 (451)
.++.+-+-+.+.+|.....+..+..+.+...+++.--+. .++.++++.|+..-...|.+. -|-.|.+.+..+++++
T Consensus 281 ~ll~~y~i~~IEdPl~~dD~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iK--v~qiGGitea~~ia~l 358 (439)
T 2akz_A 281 DFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLK--VNQIGSVTEAIQACKL 358 (439)
T ss_dssp HHHHHSCEEEEECCSCTTCHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC--HHHHCCHHHHHHHHHH
T ss_pred HHHHhCCCcEEECCCCcccHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEEec--hhhcCCHHHHHHHHHH
Confidence 345555688999998877666666665566777754443 478999999987545566653 2457888899999999
Q ss_pred HHhcCCEEEEec
Q 013019 322 CHKKGAIVCIDG 333 (451)
Q Consensus 322 A~~~g~~lVVD~ 333 (451)
|+++|+.+++=-
T Consensus 359 A~~~g~~~~~sh 370 (439)
T 2akz_A 359 AQENGWGVMVSH 370 (439)
T ss_dssp HHHTTCEEEEEC
T ss_pred HHHCCCeEEeec
Confidence 999999877643
No 319
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=28.56 E-value=28 Score=37.77 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=26.6
Q ss_pred CCCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 305 PsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
|..|++...+++++++.||++|+.||.|-++.
T Consensus 247 ~~~~~~~~~efk~lV~~~H~~Gi~VilDvV~N 278 (714)
T 2ya0_A 247 PKNPEKRIAEFKNLINEIHKRGMGAILDVVYN 278 (714)
T ss_dssp TTSTTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCccchHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 44555567899999999999999999998853
No 320
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=28.50 E-value=31 Score=35.21 Aligned_cols=27 Identities=22% Similarity=0.308 Sum_probs=25.1
Q ss_pred ccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 309 FLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 309 tG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
.|+..|+++|++.||++|+.||+|-++
T Consensus 78 ~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 78 YGTLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 688889999999999999999999985
No 321
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=28.28 E-value=65 Score=28.86 Aligned_cols=45 Identities=18% Similarity=0.188 Sum_probs=31.4
Q ss_pred HHHHhhcCCCeEEEEEeCCC--CCccccccHHHHHHHHHhcCCEEEEe
Q 013019 287 GLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 287 ~Le~ai~~~~tklV~lesPs--NPtG~v~DL~~IaelA~~~g~~lVVD 332 (451)
++.+.|.+.++.+|+. +|. ++.....|...|.+.|-.+|++++.-
T Consensus 89 qI~d~I~~geIdlVIn-t~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tn 135 (178)
T 1vmd_A 89 QIGAMIAEGKIDVLIF-FWDPLEPQAHDVDVKALIRIATVYNIPVAIT 135 (178)
T ss_dssp HHHHHHHTTSCCEEEE-ECCSSSCCTTSCCHHHHHHHHHHTTCCEESS
T ss_pred hHHHHHHCCCccEEEE-ccCccCCCcccccHHHHHHHHHHcCCCEEeC
Confidence 4666676666777665 444 43332568999999999999998643
No 322
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=28.15 E-value=4e+02 Score=25.43 Aligned_cols=82 Identities=17% Similarity=0.102 Sum_probs=50.7
Q ss_pred hhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCC--CccccccHHHHHHHHHhcCCEEEEecCCCCCCc-cccccC
Q 013019 270 LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN--PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSL 346 (451)
Q Consensus 270 l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsN--PtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~-~~pl~~ 346 (451)
++..|+.+.. ...+.+..+.+.+.. ...|+++.+.. .+|...+++.+.++.+..+++++.+.=..++-. ...+.+
T Consensus 120 l~~~g~~v~~-~v~s~~~a~~a~~~G-aD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al~~ 197 (326)
T 3bo9_A 120 LKENGTKVIP-VVASDSLARMVERAG-ADAVIAEGMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFAL 197 (326)
T ss_dssp HHHTTCEEEE-EESSHHHHHHHHHTT-CSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHH
T ss_pred HHHcCCcEEE-EcCCHHHHHHHHHcC-CCEEEEECCCCCccCCCccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHh
Confidence 4445766542 335667776666553 77888876531 234556788888888888999999986543311 233445
Q ss_pred CCcEEEE
Q 013019 347 GADLVLH 353 (451)
Q Consensus 347 GaDiVv~ 353 (451)
|+|.|.-
T Consensus 198 GA~gV~v 204 (326)
T 3bo9_A 198 GAEAVQM 204 (326)
T ss_dssp TCSEEEE
T ss_pred CCCEEEe
Confidence 6665543
No 323
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=28.12 E-value=1e+02 Score=29.53 Aligned_cols=21 Identities=14% Similarity=0.060 Sum_probs=11.6
Q ss_pred ccHHHHHHHHHhcCCEEEEec
Q 013019 313 VDVKLVSDLCHKKGAIVCIDG 333 (451)
Q Consensus 313 ~DL~~IaelA~~~g~~lVVD~ 333 (451)
.+.++|.++|+++|..+.+.-
T Consensus 124 ~ea~~l~~~a~~~~~~l~v~~ 144 (350)
T 4had_A 124 GDIDAVIAARDRNKVVVTEAY 144 (350)
T ss_dssp GGGHHHHHHHHHHTCCEEECC
T ss_pred hhHHHHHHHHHHcCCceeEee
Confidence 345555666665555555543
No 324
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=28.08 E-value=2.4e+02 Score=27.04 Aligned_cols=95 Identities=11% Similarity=0.136 Sum_probs=49.9
Q ss_pred cEEEeC-CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-CCCHHHHHHhhcCCCeEEEEEeC
Q 013019 227 STVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTES 304 (451)
Q Consensus 227 ~~vv~s-SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd-~~D~d~Le~ai~~~~tklV~les 304 (451)
..++++ +|.-+- .++..|++.|.+|++....-.... ...+....++++...| ..|.+.++++++. ...|+.+.
T Consensus 7 ~ilVtGatG~iG~-~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~--~d~Vi~~a 81 (352)
T 1xgk_A 7 TIAVVGATGRQGA-SLIRVAAAVGHHVRAQVHSLKGLI--AEELQAIPNVTLFQGPLLNNVPLMDTLFEG--AHLAFINT 81 (352)
T ss_dssp CEEEESTTSHHHH-HHHHHHHHTTCCEEEEESCSCSHH--HHHHHTSTTEEEEESCCTTCHHHHHHHHTT--CSEEEECC
T ss_pred EEEEECCCCHHHH-HHHHHHHhCCCEEEEEECCCChhh--HHHHhhcCCcEEEECCccCCHHHHHHHHhc--CCEEEEcC
Confidence 345553 344332 233456667877766432111110 1111112356766678 8899999998864 56666543
Q ss_pred CCCCccccccHHHHHHHHHhcC
Q 013019 305 PTNPFLRCVDVKLVSDLCHKKG 326 (451)
Q Consensus 305 PsNPtG~v~DL~~IaelA~~~g 326 (451)
..........-+.+.+.|++.|
T Consensus 82 ~~~~~~~~~~~~~l~~aa~~~g 103 (352)
T 1xgk_A 82 TSQAGDEIAIGKDLADAAKRAG 103 (352)
T ss_dssp CSTTSCHHHHHHHHHHHHHHHS
T ss_pred CCCCcHHHHHHHHHHHHHHHcC
Confidence 3211111122367888888877
No 325
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=28.04 E-value=31 Score=35.11 Aligned_cols=31 Identities=19% Similarity=0.290 Sum_probs=27.0
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
+.-.|+..|++++++.||++|+.||+|-++.
T Consensus 91 dp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (478)
T 2guy_A 91 NENYGTADDLKALSSALHERGMYLMVDVVAN 121 (478)
T ss_dssp CTTSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 3347888999999999999999999999853
No 326
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=28.03 E-value=52 Score=27.83 Aligned_cols=43 Identities=14% Similarity=0.196 Sum_probs=29.0
Q ss_pred HHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 286 d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
+-++++++.. ++.||+. +. . .-+++.++|+++|+.++-+++.+
T Consensus 92 ~vv~~~~~~g-i~~i~~~-~g----~--~~~~l~~~a~~~Gi~vvGpnc~g 134 (144)
T 2d59_A 92 EYVEQAIKKG-AKVVWFQ-YN----T--YNREASKKADEAGLIIVANRCMM 134 (144)
T ss_dssp HHHHHHHHHT-CSEEEEC-TT----C--CCHHHHHHHHHTTCEEEESCCHH
T ss_pred HHHHHHHHcC-CCEEEEC-CC----c--hHHHHHHHHHHcCCEEEcCCchh
Confidence 3344455443 6777763 32 2 25789999999999999888753
No 327
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=28.01 E-value=1.2e+02 Score=29.28 Aligned_cols=67 Identities=18% Similarity=0.278 Sum_probs=39.5
Q ss_pred CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC------C---CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHH
Q 013019 249 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (451)
Q Consensus 249 GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~------~---D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~Ia 319 (451)
+..+++..+.|+- +++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+.
T Consensus 190 ~~~~v~~H~af~Y-------fa~~yGl~~~~~~~i~~~~ePs~~~l~~l~~~ik~~~v~~If~e~~~~~-------k~~~ 255 (307)
T 3ujp_A 190 QRFLVSCEGAFSY-------LARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSD-------KGQK 255 (307)
T ss_dssp GCEEEEEESTTHH-------HHHHTTCEEEEEESSCCSSCCCHHHHHHHHHHHHTTTCSEEEEETTSCS-------HHHH
T ss_pred CCEEEEECchHHH-------HHHHCCCcEEEeeccCCCCCCCHHHHHHHHHHHHhcCCcEEEEeCCCCh-------HHHH
Confidence 4456665555542 34667877654321 1 3555666666666888888755544 3455
Q ss_pred HHHHhcCCEE
Q 013019 320 DLCHKKGAIV 329 (451)
Q Consensus 320 elA~~~g~~l 329 (451)
.++++.|+.+
T Consensus 256 ~ia~e~g~~v 265 (307)
T 3ujp_A 256 QVAQATGARF 265 (307)
T ss_dssp HTTTTTCCEE
T ss_pred HHHHHhCCce
Confidence 5667777765
No 328
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=27.89 E-value=2.8e+02 Score=23.51 Aligned_cols=53 Identities=13% Similarity=-0.088 Sum_probs=31.3
Q ss_pred HhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEE--EEecCCCCCCccccccCCCcEEEE
Q 013019 290 AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV--CIDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 290 ~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~l--VVD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
..++++ .-+|++ + ..|...++-++++.|+++|+.+ |.++. ..++..-+|+++.
T Consensus 106 ~~~~~~-Dvvi~i-S---~sG~t~~~~~~~~~ak~~g~~vi~iT~~~------~s~L~~~ad~~l~ 160 (188)
T 1tk9_A 106 ALGNEK-DVLIGI-S---TSGKSPNVLEALKKAKELNMLCLGLSGKG------GGMMNKLCDHNLV 160 (188)
T ss_dssp HHCCTT-CEEEEE-C---SSSCCHHHHHHHHHHHHTTCEEEEEEEGG------GTTHHHHCSEEEE
T ss_pred HhCCCC-CEEEEE-e---CCCCCHHHHHHHHHHHHCCCEEEEEeCCC------CcchHHcCCEEEE
Confidence 335554 334444 2 2477778888999999999764 34432 2333334777663
No 329
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=27.83 E-value=32 Score=34.24 Aligned_cols=29 Identities=17% Similarity=0.186 Sum_probs=25.8
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
-.|...|++++++.||++|+.||+|-++.
T Consensus 64 ~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 92 (405)
T 1ht6_A 64 KYGNAAELKSLIGALHGKGVQAIADIVIN 92 (405)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 36888899999999999999999999853
No 330
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=27.75 E-value=27 Score=35.59 Aligned_cols=31 Identities=10% Similarity=0.126 Sum_probs=27.0
Q ss_pred CCCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 305 PsNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
+....|+..|++++++.||++|+.||+|-++
T Consensus 67 idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 97 (471)
T 1jae_A 67 INTRSGDESAFTDMTRRCNDAGVRIYVDAVI 97 (471)
T ss_dssp SEETTEEHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4444788889999999999999999999885
No 331
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=27.62 E-value=1.8e+02 Score=28.90 Aligned_cols=77 Identities=17% Similarity=0.220 Sum_probs=39.8
Q ss_pred EEEeCCHHHHHHHHHHHHccCCC---eEEEcCCCCcchHHHHHHhhhc--CCcEEEEeCCCCHHHHHHhhcCCCeEEEEE
Q 013019 228 TVIMASGMSASTVMLLALVPAGG---HIVTTTDCYRKTRIFIETVLPK--MGITATVIDPADMEGLEAALNNNNVSLFFT 302 (451)
Q Consensus 228 ~vv~sSG~aAi~~al~all~~GD---~VIv~~~~Y~~t~~~l~~~l~~--~Gi~v~~vd~~D~d~Le~ai~~~~tklV~l 302 (451)
.++++.|..+- .++..+.+.|+ +|++.+..-.....+.+.+-.. ..+....+|..|.+++++++++.+..+|+.
T Consensus 4 VlIiGaGgiG~-~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVin 82 (405)
T 4ina_A 4 VLQIGAGGVGG-VVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVLN 82 (405)
T ss_dssp EEEECCSHHHH-HHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred EEEECCCHHHH-HHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEEE
Confidence 55666664332 33445666664 5665433221111112111111 135666678788888888886522567776
Q ss_pred eCC
Q 013019 303 ESP 305 (451)
Q Consensus 303 esP 305 (451)
+.|
T Consensus 83 ~ag 85 (405)
T 4ina_A 83 IAL 85 (405)
T ss_dssp CSC
T ss_pred CCC
Confidence 555
No 332
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=27.62 E-value=33 Score=34.54 Aligned_cols=30 Identities=23% Similarity=0.073 Sum_probs=26.6
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
....|+..|+++|++-||++|+.||.|-++
T Consensus 75 dp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~ 104 (424)
T 2dh2_A 75 DPNFGSKEDFDSLLQSAKKKSIRVILDLTP 104 (424)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 334788999999999999999999999985
No 333
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=27.45 E-value=1.2e+02 Score=31.02 Aligned_cols=96 Identities=13% Similarity=0.048 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCC--cEEEEeC--CCCHHHHHHhhcCCCeEEEEEeCCCCCcc
Q 013019 235 MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVID--PADMEGLEAALNNNNVSLFFTESPTNPFL 310 (451)
Q Consensus 235 ~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~G--i~v~~vd--~~D~d~Le~ai~~~~tklV~lesPsNPtG 310 (451)
-+++.. +..++..-+-+.+.+|....-+..+..+.+..+ +++.--| ..+++.+++.|+.+-...|.+- -|-.|
T Consensus 284 ~Elid~-y~~lle~ypIv~IEDPl~~dD~eg~a~Lt~~lg~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIK--vnQIG 360 (452)
T 3otr_A 284 EKLKEV-YEGWLKKYPIISVEDPFDQDDFASFSAFTKDVGEKTQVIGDDILVTNILRIEKALKDKACNCLLLK--VNQIG 360 (452)
T ss_dssp HHHHHH-HHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC--HHHHC
T ss_pred HHHHHH-HHHHHhhhCceEEecCCChhhHHHHHHHHHhhCCCeEEEeCccccCCHHHHHHHHhcCCCCEEEee--ccccc
Confidence 344433 334555556788888887776666666666666 6664433 2478899988876545566652 34578
Q ss_pred ccccHHHHHHHHHhcCCEEEEec
Q 013019 311 RCVDVKLVSDLCHKKGAIVCIDG 333 (451)
Q Consensus 311 ~v~DL~~IaelA~~~g~~lVVD~ 333 (451)
.+.+.-+++++|+++|..+++=.
T Consensus 361 gITEalka~~lA~~~G~~vmvsh 383 (452)
T 3otr_A 361 SVTEAIEACLLAQKSGWGVQVSH 383 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEC
T ss_pred cHHHHHHHHHHHHHcCCeEEEeC
Confidence 88899999999999999887754
No 334
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=27.34 E-value=24 Score=38.36 Aligned_cols=28 Identities=25% Similarity=0.330 Sum_probs=24.4
Q ss_pred ccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 309 FLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 309 tG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
+++..|++++++.||++|+.||.|-++.
T Consensus 312 ~~~~~dfk~LV~~aH~~GI~VIlDvV~N 339 (718)
T 2e8y_A 312 QTRKTELKQMINTLHQHGLRVILDVVFN 339 (718)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cccHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4457899999999999999999998853
No 335
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=27.13 E-value=73 Score=28.82 Aligned_cols=43 Identities=12% Similarity=0.185 Sum_probs=34.4
Q ss_pred CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEE
Q 013019 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (451)
Q Consensus 283 ~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVV 331 (451)
.|.++|+++++.. ...||+ -+|.+..++++.+.++++|-.+++
T Consensus 17 r~~~~l~~al~s~-~~~ifl-----l~g~i~~l~~~v~~lk~~~K~v~V 59 (192)
T 3kts_A 17 HNQKDMEKILELD-LTYMVM-----LETHVAQLKALVKYAQAGGKKVLL 59 (192)
T ss_dssp SSSHHHHHHTTSS-CCEEEE-----CSEETTTHHHHHHHHHHTTCEEEE
T ss_pred cCHHHHHHHHcCC-CCEEEE-----ecCcHHHHHHHHHHHHHcCCeEEE
Confidence 3678999999764 677887 257888999999999999866555
No 336
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=27.07 E-value=35 Score=34.36 Aligned_cols=28 Identities=25% Similarity=0.373 Sum_probs=24.7
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
..|...|++++++.||++|+.||+|-++
T Consensus 79 ~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 79 EYGTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3577778999999999999999999985
No 337
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=26.96 E-value=1.2e+02 Score=25.15 Aligned_cols=54 Identities=11% Similarity=0.145 Sum_probs=32.3
Q ss_pred CCcEEEEeCCCCHHHHHHhhcC----------CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEE
Q 013019 273 MGITATVIDPADMEGLEAALNN----------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (451)
Q Consensus 273 ~Gi~v~~vd~~D~d~Le~ai~~----------~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lV 330 (451)
+++.+..+...|++.|.+.+++ +.+-+|-++.-. ...|+.+|.++++++|+.+|
T Consensus 15 ~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 15 FTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred eeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 4455555555677776666642 112233332221 23689999999999998764
No 338
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=26.48 E-value=90 Score=28.82 Aligned_cols=34 Identities=9% Similarity=-0.035 Sum_probs=28.7
Q ss_pred eEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEE
Q 013019 297 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (451)
Q Consensus 297 tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVV 331 (451)
+..|++|-. |..|....+.++.++|++||+.+|.
T Consensus 168 Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 168 PAGVLCELT-NDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp SCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEEE
Confidence 567777755 6789999999999999999998764
No 339
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=26.40 E-value=1.7e+02 Score=28.35 Aligned_cols=75 Identities=11% Similarity=0.079 Sum_probs=46.0
Q ss_pred ccCCCeEEEcCCCCcchHHHH---HHhhhcCCcEEEEeCC----------CC---HHHHHHhhcCCCeEEEEEeCCCCCc
Q 013019 246 VPAGGHIVTTTDCYRKTRIFI---ETVLPKMGITATVIDP----------AD---MEGLEAALNNNNVSLFFTESPTNPF 309 (451)
Q Consensus 246 l~~GD~VIv~~~~Y~~t~~~l---~~~l~~~Gi~v~~vd~----------~D---~d~Le~ai~~~~tklV~lesPsNPt 309 (451)
+++||+|-+..|..+.....+ ...++.+|.++.+-+. .| .++|.+++.+..+++|+...-..-.
T Consensus 14 L~~Gd~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga 93 (311)
T 1zl0_A 14 QPIDGRVALIAPASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYGC 93 (311)
T ss_dssp CCCCSEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSSCG
T ss_pred CCCcCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEECccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCcCH
Confidence 578999888887765433222 2346678988886432 12 5677778876668999985443322
Q ss_pred ccc---ccHHHHHH
Q 013019 310 LRC---VDVKLVSD 320 (451)
Q Consensus 310 G~v---~DL~~Iae 320 (451)
.++ .|.+.|.+
T Consensus 94 ~rlLp~LD~~~i~~ 107 (311)
T 1zl0_A 94 GQLLPGLDWGRLQA 107 (311)
T ss_dssp GGGTTTCCHHHHHH
T ss_pred HHHhhccchhhhhc
Confidence 233 34555543
No 340
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=26.36 E-value=1.7e+02 Score=28.49 Aligned_cols=88 Identities=11% Similarity=0.154 Sum_probs=59.1
Q ss_pred ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHh
Q 013019 246 VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK 324 (451)
Q Consensus 246 l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd-~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~ 324 (451)
+.+-+-..+..|........+..+.+..++.+-..+ ..+++++++.++.....+|.+. | +-.|-+....+++++|++
T Consensus 205 l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik-~-~~~GGit~~~~i~~~A~~ 282 (368)
T 1sjd_A 205 LDPFGLLLIEQPLEEEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIK-P-GRVGGYLEARRVHDVCAA 282 (368)
T ss_dssp TGGGCCSEEECCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEEC-T-TTTTSHHHHHHHHHHHHH
T ss_pred HHhcCCCeEeCCCChhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEec-c-cccCCHHHHHHHHHHHHH
Confidence 343334466777655455555555555667765443 2478888888876556777763 3 457888888999999999
Q ss_pred cCCEEEEecCC
Q 013019 325 KGAIVCIDGTF 335 (451)
Q Consensus 325 ~g~~lVVD~tf 335 (451)
+|+.+++=..+
T Consensus 283 ~g~~~~~~~~~ 293 (368)
T 1sjd_A 283 HGIPVWCGGMI 293 (368)
T ss_dssp TTCCEEECCCC
T ss_pred cCCcEEeCCcc
Confidence 99996665544
No 341
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=26.25 E-value=2.3e+02 Score=26.36 Aligned_cols=105 Identities=17% Similarity=0.176 Sum_probs=54.7
Q ss_pred HccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEE--eCCCCHHHHHHhhcCCCeEEEEEeCCCCCc--ccc---cc--
Q 013019 245 LVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPF--LRC---VD-- 314 (451)
Q Consensus 245 ll~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~--vd~~D~d~Le~ai~~~~tklV~lesPsNPt--G~v---~D-- 314 (451)
+.+.| |-|.+....-....+.++ ..+..|+++-. .+...++.++..+.. +.+|++-+. ||. |.. ..
T Consensus 105 ~~~aGAd~itvH~Ea~~~~~~~i~-~ir~~G~k~Gvalnp~Tp~e~l~~~l~~--vD~VlvMsV-~PGfgGQ~fi~~~l~ 180 (246)
T 3inp_A 105 FAKAGATSIVFHPEASEHIDRSLQ-LIKSFGIQAGLALNPATGIDCLKYVESN--IDRVLIMSV-NPGFGGQKFIPAMLD 180 (246)
T ss_dssp HHHHTCSEEEECGGGCSCHHHHHH-HHHTTTSEEEEEECTTCCSGGGTTTGGG--CSEEEEECS-CTTC--CCCCTTHHH
T ss_pred HHHcCCCEEEEccccchhHHHHHH-HHHHcCCeEEEEecCCCCHHHHHHHHhc--CCEEEEeee-cCCCCCcccchHHHH
Confidence 33445 555553322222233443 34666766433 233456666666653 566665443 342 321 12
Q ss_pred -HHHHHHHHHhc--CCEEEEecCCCCCCccccccCCCcEEEE
Q 013019 315 -VKLVSDLCHKK--GAIVCIDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 315 -L~~IaelA~~~--g~~lVVD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
++++.+++.++ ++.+.+|.-....-.....+.|+|+++-
T Consensus 181 KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~ 222 (246)
T 3inp_A 181 KAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVA 222 (246)
T ss_dssp HHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEE
Confidence 45555555554 4889999865433333456789998774
No 342
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=26.07 E-value=95 Score=28.44 Aligned_cols=35 Identities=6% Similarity=-0.091 Sum_probs=29.6
Q ss_pred eEEEEEeCC-CCCccccccHHHHHHHHHhcCCEEEE
Q 013019 297 VSLFFTESP-TNPFLRCVDVKLVSDLCHKKGAIVCI 331 (451)
Q Consensus 297 tklV~lesP-sNPtG~v~DL~~IaelA~~~g~~lVV 331 (451)
+..|++|-. -|..|....++++.++|++||+.++.
T Consensus 159 Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 159 PAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp SBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred ceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 577888873 46789999999999999999998874
No 343
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=25.99 E-value=34 Score=34.67 Aligned_cols=30 Identities=20% Similarity=0.338 Sum_probs=26.3
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
..-.|+..|++++++.||++|+.||+|-++
T Consensus 90 dp~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 119 (475)
T 2z1k_A 90 DPILGGNEALRHLLEVAHAHGVRVILDGVF 119 (475)
T ss_dssp CGGGTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 334688899999999999999999999875
No 344
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=25.79 E-value=1.2e+02 Score=28.98 Aligned_cols=19 Identities=5% Similarity=0.116 Sum_probs=9.7
Q ss_pred HHHHHHHHHh--cCCEEEEec
Q 013019 315 VKLVSDLCHK--KGAIVCIDG 333 (451)
Q Consensus 315 L~~IaelA~~--~g~~lVVD~ 333 (451)
++++.++.++ .|-+..+..
T Consensus 132 ~~~~k~~i~~g~iG~i~~v~~ 152 (334)
T 3ohs_X 132 SEALRSVLAQGTLGDLRVARA 152 (334)
T ss_dssp HHHHHHHHHHTTTCSEEEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEEE
Confidence 5566666543 344544444
No 345
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=25.79 E-value=1.7e+02 Score=27.67 Aligned_cols=81 Identities=12% Similarity=0.052 Sum_probs=39.1
Q ss_pred CeEEEcCCCCcchHHHHHHhhhcCCcEEEE-eCC-CCHHHHHHhhcCCCeEEEEEeCCCCCccccc----cHHHHHHHHH
Q 013019 250 GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCH 323 (451)
Q Consensus 250 D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~-vd~-~D~d~Le~ai~~~~tklV~lesPsNPtG~v~----DL~~IaelA~ 323 (451)
|-|++++-.+..... +...++..|+...+ +.+ .+.+.+++..+.. ...|++-+-...||.-. ++.++.+..+
T Consensus 127 dGvIipDlp~ee~~~-~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~-~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr 204 (271)
T 3nav_A 127 DSVLIADVPTNESQP-FVAAAEKFGIQPIFIAPPTASDETLRAVAQLG-KGYTYLLSRAGVTGAETKANMPVHALLERLQ 204 (271)
T ss_dssp CEEEETTSCGGGCHH-HHHHHHHTTCEEEEEECTTCCHHHHHHHHHHC-CSCEEECCCC--------CCHHHHHHHHHHH
T ss_pred CEEEECCCCHHHHHH-HHHHHHHcCCeEEEEECCCCCHHHHHHHHHHC-CCeEEEEeccCCCCcccCCchhHHHHHHHHH
Confidence 667777766654333 33456677776443 333 3455555544432 34566544433466432 3445455555
Q ss_pred hc-CCEEEEe
Q 013019 324 KK-GAIVCID 332 (451)
Q Consensus 324 ~~-g~~lVVD 332 (451)
++ ++++++.
T Consensus 205 ~~~~~Pv~vG 214 (271)
T 3nav_A 205 QFDAPPALLG 214 (271)
T ss_dssp HTTCCCEEEC
T ss_pred HhcCCCEEEE
Confidence 54 5666663
No 346
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=25.78 E-value=4.2e+02 Score=26.65 Aligned_cols=96 Identities=10% Similarity=-0.011 Sum_probs=64.7
Q ss_pred HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCC--cEEEEeCC--CCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 236 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 236 aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~G--i~v~~vd~--~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+++.. +..++.+-+-+.+.+|.....+..+..+.+..+ +.+.--+. .++.++++.++.+-..+|.+. -|-.|.
T Consensus 267 eai~~-~~~ll~~y~i~~IEdPl~~dD~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iK--v~~iGG 343 (428)
T 3tqp_A 267 EMIDR-LTEWTKKYPVISIEDGLSENDWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILVK--LNQIGT 343 (428)
T ss_dssp HHHHH-HHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC--HHHHCC
T ss_pred HHHHH-HHHHHhhcccceEeCCCCcccHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEec--ccccCC
Confidence 44433 344455556788899987766666666655556 44432222 378899998876545666653 245788
Q ss_pred cccHHHHHHHHHhcCCEEEEecC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~t 334 (451)
+.+..+++++|+++|+.+++=-.
T Consensus 344 iTealkia~lA~~~G~~~~v~H~ 366 (428)
T 3tqp_A 344 LTETLATVGLAKSNKYGVIISHR 366 (428)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCeEEEeCC
Confidence 88999999999999999776544
No 347
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=25.58 E-value=1.3e+02 Score=29.14 Aligned_cols=68 Identities=18% Similarity=0.264 Sum_probs=40.5
Q ss_pred CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC------C---CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHH
Q 013019 249 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (451)
Q Consensus 249 GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~------~---D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~Ia 319 (451)
+..+++..+.|+- +++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+.
T Consensus 204 ~r~~v~~H~af~Y-------fa~~yGL~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~~ 269 (321)
T 1xvl_A 204 QRFLVSCEGAFSY-------LARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSD-------KGQK 269 (321)
T ss_dssp GCEEEEEESTTHH-------HHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEETTSCS-------HHHH
T ss_pred CCEEEEECchHHH-------HHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCCh-------HHHH
Confidence 4568876666542 34567877554321 1 3455555666666888888755543 3334
Q ss_pred HHHHhcCCEEE
Q 013019 320 DLCHKKGAIVC 330 (451)
Q Consensus 320 elA~~~g~~lV 330 (451)
.++++.|+.++
T Consensus 270 ~iA~e~g~~v~ 280 (321)
T 1xvl_A 270 QVAQATGARFG 280 (321)
T ss_dssp HHHTTTCCEEE
T ss_pred HHHHhcCCcee
Confidence 55777887764
No 348
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=25.54 E-value=3.8e+02 Score=24.32 Aligned_cols=64 Identities=11% Similarity=0.164 Sum_probs=43.0
Q ss_pred CHHHHHHhhcCCCeEEEEEeCCC--CCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEE
Q 013019 284 DMEGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 284 D~d~Le~ai~~~~tklV~lesPs--NPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
..+++++++... ...|.+.... +| ..++++.+.++++|..+++|-.-. .......+.|+|++..
T Consensus 90 ~~~~i~~~~~aG-ad~I~l~~~~~~~p----~~l~~~i~~~~~~g~~v~~~v~t~-eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 90 YLQDVDALAQAG-ADIIAFDASFRSRP----VDIDSLLTRIRLHGLLAMADCSTV-NEGISCHQKGIEFIGT 155 (229)
T ss_dssp SHHHHHHHHHHT-CSEEEEECCSSCCS----SCHHHHHHHHHHTTCEEEEECSSH-HHHHHHHHTTCSEEEC
T ss_pred cHHHHHHHHHcC-CCEEEECccccCCh----HHHHHHHHHHHHCCCEEEEecCCH-HHHHHHHhCCCCEEEe
Confidence 356677666543 6677765443 33 478999999999999999986421 1223455789999863
No 349
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=25.53 E-value=2.2e+02 Score=24.85 Aligned_cols=101 Identities=11% Similarity=0.059 Sum_probs=52.9
Q ss_pred CeEEEcCCCCcchHHHHHHhhhcCCcEEEE--eCCCCH-HHHHHhhcCCCeEEEEEeCCCCCcccc---ccHHHHHHHHH
Q 013019 250 GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADM-EGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCH 323 (451)
Q Consensus 250 D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~--vd~~D~-d~Le~ai~~~~tklV~lesPsNPtG~v---~DL~~IaelA~ 323 (451)
|.|++...........+...++..|+++.. ..+.++ +.++.+.+.. ...|.+. |. .+|.. .+++.+.++.+
T Consensus 79 d~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g-~d~i~v~-~g-~~g~~~~~~~~~~i~~l~~ 155 (211)
T 3f4w_A 79 DYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAG-ADMLAVH-TG-TDQQAAGRKPIDDLITMLK 155 (211)
T ss_dssp SEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHT-CCEEEEE-CC-HHHHHTTCCSHHHHHHHHH
T ss_pred CEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcC-CCEEEEc-CC-CcccccCCCCHHHHHHHHH
Confidence 777776543322222233445556776543 233343 4556655542 5667664 32 12221 25677777766
Q ss_pred hc-CCEEEEecCCCCCCccccccCCCcEEEE
Q 013019 324 KK-GAIVCIDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 324 ~~-g~~lVVD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
.. +++++++.=....-.....+.|+|.++.
T Consensus 156 ~~~~~~i~~~gGI~~~~~~~~~~~Gad~vvv 186 (211)
T 3f4w_A 156 VRRKARIAVAGGISSQTVKDYALLGPDVVIV 186 (211)
T ss_dssp HCSSCEEEEESSCCTTTHHHHHTTCCSEEEE
T ss_pred HcCCCcEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 64 7899988644311122344568886663
No 350
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=25.44 E-value=33 Score=35.06 Aligned_cols=28 Identities=25% Similarity=0.318 Sum_probs=25.5
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
-.|...|+++|++.||++|+.||+|-++
T Consensus 98 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 125 (488)
T 2wc7_A 98 MLGGNEAFKELLDAAHQRNIKVVLDGVF 125 (488)
T ss_dssp GGTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3688899999999999999999999875
No 351
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=25.38 E-value=2.1e+02 Score=28.75 Aligned_cols=110 Identities=20% Similarity=0.176 Sum_probs=53.8
Q ss_pred HHHHccCCCeEEEcCCCCcch---HHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEe-CCCCC-c-----cc
Q 013019 242 LLALVPAGGHIVTTTDCYRKT---RIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTE-SPTNP-F-----LR 311 (451)
Q Consensus 242 l~all~~GD~VIv~~~~Y~~t---~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~le-sPsNP-t-----G~ 311 (451)
+..++..|=.+|+.+..++.. ...++.+.+.+++.+..-...+.++.+.+++.. ...|.+. .|.+. + +.
T Consensus 149 ~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aG-AD~I~vG~g~Gs~~~tr~~~g~ 227 (400)
T 3ffs_A 149 AKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENG-ADGIKVGIGPGSICTTRIVAGV 227 (400)
T ss_dssp HHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTT-CSEEEECC---------CCSCB
T ss_pred HHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcC-CCEEEEeCCCCcCccccccccc
Confidence 344455564444433334321 334444434446665432345677777666553 6666661 11110 0 11
Q ss_pred -cccHH---HHHHHHHhcCCEEEEecCCCCC-CccccccCCCcEEE
Q 013019 312 -CVDVK---LVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (451)
Q Consensus 312 -v~DL~---~IaelA~~~g~~lVVD~tfa~~-~~~~pl~~GaDiVv 352 (451)
..++. ++.+.+++.++++|.|.=..++ -..+.+.+|+|.|.
T Consensus 228 g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~ 273 (400)
T 3ffs_A 228 GVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVM 273 (400)
T ss_dssp CCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEE
T ss_pred chhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEE
Confidence 22344 4444455579999999754433 12345566777654
No 352
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=25.36 E-value=1.3e+02 Score=28.33 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=16.5
Q ss_pred EEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEe
Q 013019 298 SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 298 klV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD 332 (451)
+-|++|-|- +....+.++|.++|+++|+.+.+-
T Consensus 90 khVl~EKPl--a~~~~ea~~l~~~a~~~g~~~~~~ 122 (294)
T 1lc0_A 90 KHVLVEYPM--TLSFAAAQELWELAAQKGRVLHEE 122 (294)
T ss_dssp CEEEEESCS--CSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcEEEeCCC--CCCHHHHHHHHHHHHHhCCEEEEE
Confidence 344555543 223334556666666666554443
No 353
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=25.13 E-value=35 Score=34.76 Aligned_cols=31 Identities=23% Similarity=0.285 Sum_probs=27.0
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
..-.|...|++++++.||++|+.||+|-++.
T Consensus 91 d~~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (484)
T 2aaa_A 91 NSNFGTADNLKSLSDALHARGMYLMVDVVPD 121 (484)
T ss_dssp CTTTCCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 3447888999999999999999999999853
No 354
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=25.03 E-value=80 Score=26.42 Aligned_cols=75 Identities=15% Similarity=0.243 Sum_probs=46.9
Q ss_pred CCcchHHHHHHhhhcCCcEEEEeCC-CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc---CCEEEEec
Q 013019 258 CYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDG 333 (451)
Q Consensus 258 ~Y~~t~~~l~~~l~~~Gi~v~~vd~-~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~---g~~lVVD~ 333 (451)
.|.--..++...++..|.++.+.-. ..++++.+++.+.++.+|.+++-.. .....++++.+..++. ++.+++=.
T Consensus 15 ~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~~~~~d~v~lS~~~~--~~~~~~~~~i~~l~~~g~~~i~v~vGG 92 (137)
T 1ccw_A 15 CHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYG--QGEIDCKGLRQKCDEAGLEGILLYVGG 92 (137)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCSEEEEEECSS--THHHHHTTHHHHHHHTTCTTCEEEEEE
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEecCc--CcHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 3433345566778889999886532 3567776666554578888865542 2333466677766665 36676665
Q ss_pred C
Q 013019 334 T 334 (451)
Q Consensus 334 t 334 (451)
.
T Consensus 93 ~ 93 (137)
T 1ccw_A 93 N 93 (137)
T ss_dssp S
T ss_pred C
Confidence 4
No 355
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=25.02 E-value=1.1e+02 Score=29.37 Aligned_cols=77 Identities=10% Similarity=0.009 Sum_probs=35.3
Q ss_pred CeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC--CCHHH---HHHhhcCCCeEEEEEeCCCCCcccc-ccHHHHHHHHH
Q 013019 250 GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--ADMEG---LEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCH 323 (451)
Q Consensus 250 D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~--~D~d~---Le~ai~~~~tklV~lesPsNPtG~v-~DL~~IaelA~ 323 (451)
|-|++..|.+.- .......+ ..|..|-.-.+ .++++ |.++.++.+..+ .+ .-+ .+. ..+.++.++.+
T Consensus 96 DaV~IatP~~~H-~~~a~~al-~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l-~v-g~~---~R~~p~~~~~k~~i~ 168 (393)
T 4fb5_A 96 DVVSVTTPNQFH-AEMAIAAL-EAGKHVWCEKPMAPAYADAERMLATAERSGKVA-AL-GYN---YIQNPVMRHIRKLVG 168 (393)
T ss_dssp CEEEECSCGGGH-HHHHHHHH-HTTCEEEECSCSCSSHHHHHHHHHHHHHSSSCE-EE-CCG---GGGCHHHHHHHHHHH
T ss_pred cEEEECCChHHH-HHHHHHHH-hcCCeEEEccCCcccHHHHHHhhhhHHhcCCcc-cc-ccc---cccChHHHHHHHHHH
Confidence 677777765532 23332333 34666543333 24444 444444432222 22 111 222 23567777776
Q ss_pred h--cCCEEEEec
Q 013019 324 K--KGAIVCIDG 333 (451)
Q Consensus 324 ~--~g~~lVVD~ 333 (451)
+ .|-+..+..
T Consensus 169 ~G~iG~i~~v~~ 180 (393)
T 4fb5_A 169 DGVIGRVNHVRV 180 (393)
T ss_dssp TTTTCSEEEEEE
T ss_pred cCCCccccceee
Confidence 4 455555543
No 356
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=24.98 E-value=2.5e+02 Score=24.96 Aligned_cols=112 Identities=17% Similarity=0.076 Sum_probs=63.7
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHh-hcCCCeEEEEEeC
Q 013019 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAA-LNNNNVSLFFTES 304 (451)
Q Consensus 226 e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~a-i~~~~tklV~les 304 (451)
.+.++++.|.-+.. +...|...|. |++-+..-. .++. +. .|+.+...|..|.+.|+++ +.+ .++|++.+
T Consensus 10 ~~viI~G~G~~G~~-la~~L~~~g~-v~vid~~~~----~~~~-~~-~~~~~i~gd~~~~~~l~~a~i~~--ad~vi~~~ 79 (234)
T 2aef_A 10 RHVVICGWSESTLE-CLRELRGSEV-FVLAEDENV----RKKV-LR-SGANFVHGDPTRVSDLEKANVRG--ARAVIVDL 79 (234)
T ss_dssp CEEEEESCCHHHHH-HHHHSTTSEE-EEEESCGGG----HHHH-HH-TTCEEEESCTTCHHHHHHTTCTT--CSEEEECC
T ss_pred CEEEEECCChHHHH-HHHHHHhCCe-EEEEECCHH----HHHH-Hh-cCCeEEEcCCCCHHHHHhcCcch--hcEEEEcC
Confidence 46788888875533 3345566666 666553322 1222 22 5788877788899998877 543 67788765
Q ss_pred CCCCccccccHHHHHHHHHhcC--CEEEEecCCCCCCccccccCCCcEEEE
Q 013019 305 PTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 305 PsNPtG~v~DL~~IaelA~~~g--~~lVVD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
++. ..-..++..|++.+ +.+++....... .......|+|.++.
T Consensus 80 ~~d-----~~n~~~~~~a~~~~~~~~iia~~~~~~~-~~~l~~~G~~~vi~ 124 (234)
T 2aef_A 80 ESD-----SETIHCILGIRKIDESVRIIAEAERYEN-IEQLRMAGADQVIS 124 (234)
T ss_dssp SCH-----HHHHHHHHHHHHHCSSSEEEEECSSGGG-HHHHHHHTCSEEEC
T ss_pred CCc-----HHHHHHHHHHHHHCCCCeEEEEECCHhH-HHHHHHCCCCEEEC
Confidence 541 11234566777765 466665432111 11112468887664
No 357
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=24.81 E-value=88 Score=29.18 Aligned_cols=84 Identities=15% Similarity=0.168 Sum_probs=52.0
Q ss_pred CCeEEEcC---CCCcchHHHHHHhhhcCCcEEEEeCC-CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHh
Q 013019 249 GGHIVTTT---DCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK 324 (451)
Q Consensus 249 GD~VIv~~---~~Y~~t~~~l~~~l~~~Gi~v~~vd~-~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~ 324 (451)
+.+|++.. ..|.--..++...++..|.++.+... ..++++.+++.+.++.+|.+..-. +.....++++.+..++
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~--~~~~~~~~~~i~~l~~ 200 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALM--TTTMYAFKEVNDMLLE 200 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCC--TTTTTHHHHHHHHHHT
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeec--cCCHHHHHHHHHHHHh
Confidence 34555543 33433445566678889999876542 245666666654457888875443 3345578888888887
Q ss_pred cC--CEEEEecC
Q 013019 325 KG--AIVCIDGT 334 (451)
Q Consensus 325 ~g--~~lVVD~t 334 (451)
.| +.+++=..
T Consensus 201 ~~~~~~v~vGG~ 212 (258)
T 2i2x_B 201 NGIKIPFACGGG 212 (258)
T ss_dssp TTCCCCEEEEST
T ss_pred cCCCCcEEEECc
Confidence 65 66666554
No 358
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=24.78 E-value=3e+02 Score=27.81 Aligned_cols=91 Identities=13% Similarity=0.207 Sum_probs=48.1
Q ss_pred HccCCCeE-EEcCCCCcc-hHHHHHHhhhcCCcEEEEeC-CCCHH-----HHHHhhcCCCeEEEEEeCCCCCc--ccc--
Q 013019 245 LVPAGGHI-VTTTDCYRK-TRIFIETVLPKMGITATVID-PADME-----GLEAALNNNNVSLFFTESPTNPF--LRC-- 312 (451)
Q Consensus 245 ll~~GD~V-Iv~~~~Y~~-t~~~l~~~l~~~Gi~v~~vd-~~D~d-----~Le~ai~~~~tklV~lesPsNPt--G~v-- 312 (451)
+.+.|.+| ++..+.|.+ ....+.......|+++.... ..++. .++.+..+ ...+|++.+|.... -..
T Consensus 121 l~~~G~kVllv~~D~~r~~a~eqL~~~~~~~gv~~~~~~~~~dp~~i~~~al~~a~~~-~~DvvIIDTaGr~~~~~d~~l 199 (433)
T 3kl4_A 121 YKKRGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKN-KMDIIIVDTAGRHGYGEETKL 199 (433)
T ss_dssp HHHTTCCEEEEEECCSCHHHHHHHHHHHHTTTCCEECCTTCSCHHHHHHHHHHHTTTT-TCSEEEEEECCCSSSCCTTHH
T ss_pred HHHcCCeEEEEecCccchhHHHHHHHHHHhcCCceeeccccCCHHHHHHHHHHHHHhc-CCCEEEEECCCCccccCCHHH
Confidence 44556665 445566654 33334444556677654332 23443 33333323 37899999986211 111
Q ss_pred -ccHHHHHHHHHhcCCEEEEecCCC
Q 013019 313 -VDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 313 -~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
..+.++.+..+...+++|+|.+.+
T Consensus 200 m~el~~i~~~~~pd~vlLVlDa~~g 224 (433)
T 3kl4_A 200 LEEMKEMYDVLKPDDVILVIDASIG 224 (433)
T ss_dssp HHHHHHHHHHHCCSEEEEEEEGGGG
T ss_pred HHHHHHHHHhhCCcceEEEEeCccc
Confidence 123344444444678999999854
No 359
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=24.60 E-value=4.5e+02 Score=25.27 Aligned_cols=115 Identities=9% Similarity=0.041 Sum_probs=72.2
Q ss_pred HHHHhhhCCCcEEEe--CCHH---HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-CCCHHHHHH
Q 013019 217 EKMSALEGAESTVIM--ASGM---SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEA 290 (451)
Q Consensus 217 e~LA~l~gae~~vv~--sSG~---aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd-~~D~d~Le~ 290 (451)
+.+.+..|.+-.+.+ +.|. +|+.. +. .+.+-+-..+..|........+..+.+..++.+-..+ ..+.+++++
T Consensus 174 ~avR~a~g~~~~l~vDan~~~~~~~a~~~-~~-~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ 251 (354)
T 3jva_A 174 KAIREAVGFDIKLRLDANQAWTPKDAVKA-IQ-ALADYQIELVEQPVKRRDLEGLKYVTSQVNTTIMADESCFDAQDALE 251 (354)
T ss_dssp HHHHHHHCTTSEEEEECTTCSCHHHHHHH-HH-HTTTSCEEEEECCSCTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHH
T ss_pred HHHHHHcCCCCeEEEECCCCCCHHHHHHH-HH-HHHhcCCCEEECCCChhhHHHHHHHHHhCCCCEEEcCCcCCHHHHHH
Confidence 445555665555554 2232 23322 22 3444455677778765555556555556677776543 246888888
Q ss_pred hhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 291 ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 291 ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
.++.....+|.+. + +-.|-+....+|+++|+++|+.+++-..+
T Consensus 252 ~l~~~~~d~v~~k-~-~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 252 LVKKGTVDVINIK-L-MKCGGIHEALKINQICETAGIECMIGCMA 294 (354)
T ss_dssp HHHHTCCSEEEEC-H-HHHTSHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred HHHcCCCCEEEEC-c-hhcCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 8865446677663 2 23677778899999999999999887665
No 360
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=24.50 E-value=1.2e+02 Score=29.22 Aligned_cols=19 Identities=5% Similarity=0.249 Sum_probs=9.5
Q ss_pred cHHHHHHHHHhcCCEEEEe
Q 013019 314 DVKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 314 DL~~IaelA~~~g~~lVVD 332 (451)
+.++|.++|+++|+.+.+.
T Consensus 128 ea~~l~~~a~~~g~~~~v~ 146 (350)
T 3rc1_A 128 QAERLFAVARERGLLLMEN 146 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHhCCEEEEE
Confidence 4445555555555544444
No 361
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=24.30 E-value=3.8e+02 Score=24.88 Aligned_cols=87 Identities=15% Similarity=0.049 Sum_probs=48.3
Q ss_pred cEEEeC-CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEe-C
Q 013019 227 STVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTE-S 304 (451)
Q Consensus 227 ~~vv~s-SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~le-s 304 (451)
..++++ +|.-+- .++..|++.|.+|++.+..-.. .++++...|..|.+.+++++.. +..|+-. .
T Consensus 21 ~vlVtGatG~iG~-~l~~~L~~~G~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~~--~d~vih~A~ 86 (347)
T 4id9_A 21 MILVTGSAGRVGR-AVVAALRTQGRTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIMG--VSAVLHLGA 86 (347)
T ss_dssp CEEEETTTSHHHH-HHHHHHHHTTCCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHTT--CSEEEECCC
T ss_pred EEEEECCCChHHH-HHHHHHHhCCCEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHhC--CCEEEECCc
Confidence 345543 233222 3345567778877765322111 3566667788899999998874 4555533 2
Q ss_pred CCCCcccc---------ccHHHHHHHHHhcCC
Q 013019 305 PTNPFLRC---------VDVKLVSDLCHKKGA 327 (451)
Q Consensus 305 PsNPtG~v---------~DL~~IaelA~~~g~ 327 (451)
+..+.... .-...|.+.|++.++
T Consensus 87 ~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 118 (347)
T 4id9_A 87 FMSWAPADRDRMFAVNVEGTRRLLDAASAAGV 118 (347)
T ss_dssp CCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred ccCcchhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22222111 012467888888876
No 362
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=24.24 E-value=4.9e+02 Score=25.11 Aligned_cols=100 Identities=10% Similarity=0.052 Sum_probs=52.6
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCCC--eEEEcC--CCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEE
Q 013019 226 ESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 301 (451)
Q Consensus 226 e~~vv~sSG~aAi~~al~all~~GD--~VIv~~--~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~ 301 (451)
...+++-+.+..+...|....+.|. +|++.+ |.+.+. .+ ...+...|++++++.- ..+...+.+ +..|+
T Consensus 122 g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~-~l-a~~L~~~gI~vtli~D---sa~~~~m~~--vd~Vi 194 (315)
T 3ecs_A 122 GATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGK-KM-AKALCHLNVPVTVVLD---AAVGYIMEK--ADLVI 194 (315)
T ss_dssp TEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHH-HH-HHHHHTTTCCEEEECG---GGHHHHGGG--CSEEE
T ss_pred CCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHH-HH-HHHHHHcCCCEEEEeh---hHHHHHHHh--CCEEE
Confidence 3455543333334444444444553 466554 444443 33 3456778999988753 223333432 55565
Q ss_pred EeCCC-CCcccccc---HHHHHHHHHhcCCEEEEe
Q 013019 302 TESPT-NPFLRCVD---VKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 302 lesPs-NPtG~v~D---L~~IaelA~~~g~~lVVD 332 (451)
+-.=. -..|.+.. --.++-+|+.+|++++|=
T Consensus 195 vGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 195 VGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp EECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred ECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEE
Confidence 53211 12344432 246788899999998764
No 363
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=24.23 E-value=1.4e+02 Score=28.38 Aligned_cols=93 Identities=11% Similarity=0.110 Sum_probs=52.1
Q ss_pred EEEeCCHHHHHHHHHHHHcc-CCCeEE-EcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCC
Q 013019 228 TVIMASGMSASTVMLLALVP-AGGHIV-TTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (451)
Q Consensus 228 ~vv~sSG~aAi~~al~all~-~GD~VI-v~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesP 305 (451)
.-+++.|.-+-...+.++.. ++-+|+ +.+. ...-.+.+.+++|+.-.+ .|.+++ +++.++.+|++++|
T Consensus 26 igiIG~G~ig~~~~~~~~~~~~~~~lvav~d~----~~~~a~~~a~~~g~~~~y---~d~~el---l~~~~iDaV~I~tP 95 (350)
T 4had_A 26 FGIISTAKIGRDNVVPAIQDAENCVVTAIASR----DLTRAREMADRFSVPHAF---GSYEEM---LASDVIDAVYIPLP 95 (350)
T ss_dssp EEEESCCHHHHHTHHHHHHHCSSEEEEEEECS----SHHHHHHHHHHHTCSEEE---SSHHHH---HHCSSCSEEEECSC
T ss_pred EEEEcChHHHHHHHHHHHHhCCCeEEEEEECC----CHHHHHHHHHHcCCCeee---CCHHHH---hcCCCCCEEEEeCC
Confidence 34567776443333344433 343444 3332 233344556677875333 345554 44435899999999
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
++- =.+++..|-++|..|++.=-.+
T Consensus 96 ~~~------H~~~~~~al~aGkhVl~EKPla 120 (350)
T 4had_A 96 TSQ------HIEWSIKAADAGKHVVCEKPLA 120 (350)
T ss_dssp GGG------HHHHHHHHHHTTCEEEECSCCC
T ss_pred Cch------hHHHHHHHHhcCCEEEEeCCcc
Confidence 842 2355666667899998875543
No 364
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=24.23 E-value=1.5e+02 Score=30.71 Aligned_cols=148 Identities=20% Similarity=0.101 Sum_probs=74.8
Q ss_pred ccCC-CchhHHHHHHHHHhhhCC-------CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcc---hHHHHHHhhhc
Q 013019 204 YGRY-GNPTTVVVEEKMSALEGA-------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRK---TRIFIETVLPK 272 (451)
Q Consensus 204 Y~R~-~npt~~~Lee~LA~l~ga-------e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~---t~~~l~~~l~~ 272 (451)
+++. |--+...+.+.+..-... .-...+..+...... +..+++.|=.+++-+..++. ....++.+.+.
T Consensus 216 ~g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~er-a~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~ 294 (511)
T 3usb_A 216 NGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTR-IDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAK 294 (511)
T ss_dssp TSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHH-HHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred CCCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHH-HHHHHhhccceEEecccccchhhhhhHHHHHHHh
Confidence 4443 446666776666542111 112233323222222 34555666444443333442 23344444444
Q ss_pred C-CcEEEEeCCCCHHHHHHhhcCCCeEEEEEeC-CCCC-c-----cc-ccc---HHHHHHHHHhcCCEEEEecCCCCCC-
Q 013019 273 M-GITATVIDPADMEGLEAALNNNNVSLFFTES-PTNP-F-----LR-CVD---VKLVSDLCHKKGAIVCIDGTFATPL- 339 (451)
Q Consensus 273 ~-Gi~v~~vd~~D~d~Le~ai~~~~tklV~les-PsNP-t-----G~-v~D---L~~IaelA~~~g~~lVVD~tfa~~~- 339 (451)
+ ++.+..-+..+.+..+.+++.. ...|.+.. |... + |. ..+ +.++.+.+++.++++|.|.=..++.
T Consensus 295 ~~~~~vi~g~v~t~e~a~~~~~aG-ad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~d 373 (511)
T 3usb_A 295 YPSLNIIAGNVATAEATKALIEAG-ANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGD 373 (511)
T ss_dssp CTTSEEEEEEECSHHHHHHHHHHT-CSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHH
T ss_pred CCCceEEeeeeccHHHHHHHHHhC-CCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHH
Confidence 4 3555544555677777666553 66776511 1110 1 11 222 4455666788899999998655442
Q ss_pred ccccccCCCcEEEE
Q 013019 340 NQKALSLGADLVLH 353 (451)
Q Consensus 340 ~~~pl~~GaDiVv~ 353 (451)
..+.+.+|||.|+-
T Consensus 374 i~kala~GA~~V~v 387 (511)
T 3usb_A 374 MVKALAAGAHVVML 387 (511)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHHhCchhhee
Confidence 23456789987664
No 365
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=24.15 E-value=2e+02 Score=29.30 Aligned_cols=96 Identities=16% Similarity=0.194 Sum_probs=53.0
Q ss_pred cEEEeCCHHHHHHHHHHHHccC-CCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCC
Q 013019 227 STVIMASGMSASTVMLLALVPA-GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (451)
Q Consensus 227 ~~vv~sSG~aAi~~al~all~~-GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesP 305 (451)
..++++.|..+-. ++..|.+. |-+|.+.+.. ..-.+.+....++....+|..|.+++++++.+ ..+|+.++|
T Consensus 25 ~VlIiGAGgiG~a-ia~~L~~~~g~~V~v~~R~----~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~--~DvVIn~tp 97 (467)
T 2axq_A 25 NVLLLGSGFVAQP-VIDTLAANDDINVTVACRT----LANAQALAKPSGSKAISLDVTDDSALDKVLAD--NDVVISLIP 97 (467)
T ss_dssp EEEEECCSTTHHH-HHHHHHTSTTEEEEEEESS----HHHHHHHHGGGTCEEEECCTTCHHHHHHHHHT--SSEEEECSC
T ss_pred EEEEECChHHHHH-HHHHHHhCCCCeEEEEECC----HHHHHHHHHhcCCcEEEEecCCHHHHHHHHcC--CCEEEECCc
Confidence 5677777664433 23345555 4456554322 22222332224566556777788888888864 578887777
Q ss_pred CCCccc-----------cc-------cHHHHHHHHHhcCCEE
Q 013019 306 TNPFLR-----------CV-------DVKLVSDLCHKKGAIV 329 (451)
Q Consensus 306 sNPtG~-----------v~-------DL~~IaelA~~~g~~l 329 (451)
...... +. +..++.+.|++.|+.+
T Consensus 98 ~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv~~ 139 (467)
T 2axq_A 98 YTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITV 139 (467)
T ss_dssp GGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTCEE
T ss_pred hhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCCEE
Confidence 532110 01 2356667777777653
No 366
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=23.93 E-value=1.3e+02 Score=28.95 Aligned_cols=35 Identities=23% Similarity=0.167 Sum_probs=19.4
Q ss_pred EEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC
Q 013019 298 SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 298 klV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t 334 (451)
+-|++|-|- +....+.++|.++|+++|+.+.+.-.
T Consensus 107 khVl~EKPl--a~~~~ea~~l~~~a~~~g~~~~v~~~ 141 (340)
T 1zh8_A 107 VHVICEKPI--STDVETGKKVVELSEKSEKTVYIAEN 141 (340)
T ss_dssp CEEEEESSS--SSSHHHHHHHHHHHHHCSSCEEEECG
T ss_pred CcEEEeCCC--CCCHHHHHHHHHHHHHcCCeEEEEec
Confidence 445555554 22334556666666666666655543
No 367
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=23.82 E-value=1.2e+02 Score=29.75 Aligned_cols=60 Identities=8% Similarity=0.060 Sum_probs=40.1
Q ss_pred CcEEEEeCCCC-HHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 274 GITATVIDPAD-MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 274 Gi~v~~vd~~D-~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
.+-+.+++... .+.+.+++.+..++.+++-+-.-| ..+.++|.++|+++|+.|+==|+.+
T Consensus 81 DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~~---e~~~~~l~~~a~~~g~rliGPNc~G 141 (334)
T 3mwd_B 81 DVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIP---EALTRKLIKKADQKGVTIIGPATVG 141 (334)
T ss_dssp CEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCC---HHHHHHHHHHHHHHTCEEECSSCCC
T ss_pred cEEEEecCHHHHHHHHHHHHHHCCCCEEEEECCCCC---HHHHHHHHHHHHHcCCEEEccCCcc
Confidence 34455555544 467777787445777776333222 1477899999999999998877754
No 368
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=23.81 E-value=36 Score=34.06 Aligned_cols=27 Identities=15% Similarity=0.145 Sum_probs=25.4
Q ss_pred ccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 309 FLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 309 tG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
.|...|++++++.||++|+.||+|-++
T Consensus 71 ~G~~~d~~~lv~~~h~~Gi~VilD~V~ 97 (422)
T 1ua7_A 71 LGTEQEFKEMCAAAEEYGIKVIVDAVI 97 (422)
T ss_dssp TEEHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 789999999999999999999999885
No 369
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=23.81 E-value=1.3e+02 Score=28.54 Aligned_cols=18 Identities=6% Similarity=-0.029 Sum_probs=8.7
Q ss_pred cHHHHHHHHHhcCCEEEE
Q 013019 314 DVKLVSDLCHKKGAIVCI 331 (451)
Q Consensus 314 DL~~IaelA~~~g~~lVV 331 (451)
+.++|.++|+++|+.+.+
T Consensus 106 e~~~l~~~a~~~~~~~~v 123 (329)
T 3evn_A 106 QANELFALAESCNLFLME 123 (329)
T ss_dssp HHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHcCCEEEE
Confidence 444455555555544443
No 370
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=23.79 E-value=4.9e+02 Score=25.74 Aligned_cols=114 Identities=10% Similarity=0.052 Sum_probs=70.1
Q ss_pred HHHHhhhCCCcEEEe-CCHH----HHHHHHHHHHccCCCeEEEcCC-CCcchHHHHHHhhhcCCcEEEEeC-CCCHHHHH
Q 013019 217 EKMSALEGAESTVIM-ASGM----SASTVMLLALVPAGGHIVTTTD-CYRKTRIFIETVLPKMGITATVID-PADMEGLE 289 (451)
Q Consensus 217 e~LA~l~gae~~vv~-sSG~----aAi~~al~all~~GD~VIv~~~-~Y~~t~~~l~~~l~~~Gi~v~~vd-~~D~d~Le 289 (451)
+++.+..|.+-.+.+ .+|. +|+.. +.. +.+-+-..+..| +.......+..+.+..++.+-..+ ..+.++++
T Consensus 204 ~avR~a~g~d~~l~vDaN~~~~~~~A~~~-~~~-L~~~~i~~iEqP~~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 281 (410)
T 3dip_A 204 RKIRAAVGQRIEIMCELHSLWGTHAAARI-CNA-LADYGVLWVEDPIAKMDNIPAVADLRRQTRAPICGGENLAGTRRFH 281 (410)
T ss_dssp HHHHHHHTTSSEEEEECTTCBCHHHHHHH-HHH-GGGGTCSEEECCBSCTTCHHHHHHHHHHHCCCEEECTTCCSHHHHH
T ss_pred HHHHHHcCCCceEEEECCCCCCHHHHHHH-HHH-HHhcCCCEEECCCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHH
Confidence 344455565544544 2333 33322 223 344344566777 555555555555555677765443 24688888
Q ss_pred HhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC
Q 013019 290 AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 290 ~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t 334 (451)
+.++.....+|.+. ++ -.|-+....+|+++|+++|+.+..=+.
T Consensus 282 ~~l~~~~~d~v~~k-~~-~~GGit~~~~ia~~A~~~gi~~~~h~~ 324 (410)
T 3dip_A 282 EMLCADAIDFVMLD-LT-WCGGLSEGRKIAALAETHARPLAPHXT 324 (410)
T ss_dssp HHHHTTCCSEEEEC-TT-TSSCHHHHHHHHHHHHHTTCCEEECSS
T ss_pred HHHHcCCCCeEeec-cc-ccCCHHHHHHHHHHHHHcCCEEeeeCc
Confidence 88876556777764 33 467788889999999999999877554
No 371
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=23.77 E-value=5.1e+02 Score=25.27 Aligned_cols=116 Identities=8% Similarity=0.041 Sum_probs=70.3
Q ss_pred HHHHhhhCCCcEEEe--CCHH---HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-CCCHHHHHH
Q 013019 217 EKMSALEGAESTVIM--ASGM---SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEA 290 (451)
Q Consensus 217 e~LA~l~gae~~vv~--sSG~---aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd-~~D~d~Le~ 290 (451)
+.+.+..|.+-.+.+ +.|. +|+.. +..+ .+-+-..+..|........+..+.+..++.+-..+ ..+.+++++
T Consensus 185 ~avR~a~g~~~~l~vDan~~~~~~~A~~~-~~~l-~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ 262 (383)
T 3i4k_A 185 AELAREVGDRVSLRIDINARWDRRTALHY-LPIL-AEAGVELFEQPTPADDLETLREITRRTNVSVMADESVWTPAEALA 262 (383)
T ss_dssp HHHHHTTTTTSEEEEECTTCSCHHHHHHH-HHHH-HHTTCCEEESCSCTTCHHHHHHHHHHHCCEEEESTTCSSHHHHHH
T ss_pred HHHHHHcCCCCEEEEECCCCCCHHHHHHH-HHHH-HhcCCCEEECCCChhhHHHHHHHHhhCCCCEEecCccCCHHHHHH
Confidence 344555565444443 2222 33322 2333 33344566777665545555555555677765433 246888888
Q ss_pred hhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 291 ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 291 ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
.++.....+|.+. ++ -.|-+....+|+++|+++|+.+++=..+.
T Consensus 263 ~i~~~~~d~v~~k-~~-~~GGit~~~~ia~~A~~~gi~~~~~~~~e 306 (383)
T 3i4k_A 263 VVKAQAADVIALK-TT-KHGGLLESKKIAAIAEAGGLACHGATSLE 306 (383)
T ss_dssp HHHHTCCSEEEEC-TT-TTTSHHHHHHHHHHHHHTTCEEEECCSCC
T ss_pred HHHcCCCCEEEEc-cc-ccCCHHHHHHHHHHHHHcCCeEEeCCCCc
Confidence 8865446777764 33 47888889999999999999998765443
No 372
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=23.67 E-value=1.2e+02 Score=29.43 Aligned_cols=9 Identities=11% Similarity=0.139 Sum_probs=4.7
Q ss_pred CeEEEcCCC
Q 013019 250 GHIVTTTDC 258 (451)
Q Consensus 250 D~VIv~~~~ 258 (451)
|-|++..|.
T Consensus 69 D~V~i~tp~ 77 (364)
T 3e82_A 69 DLVVIASPN 77 (364)
T ss_dssp SEEEECSCG
T ss_pred CEEEEeCCh
Confidence 555555544
No 373
>1lu0_A CMTI-I, trypsin inhibitor I; serine protease inhibitor, metal coordination, hydrolase INH; 1.03A {Cucurbita maxima} SCOP: g.3.2.1 PDB: 2v1v_A 1cti_A 1ppe_I 2cti_A 2sta_I 3cti_A 2btc_I 2stb_I 2eti_A 2it7_A
Probab=23.62 E-value=18 Score=22.66 Aligned_cols=15 Identities=40% Similarity=0.855 Sum_probs=12.5
Q ss_pred cccccccccCCCCCccccCCCCC
Q 013019 7 SSQKILSFSSSCSSFECRSDPDF 29 (451)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (451)
.|||++ .+|..|.|-
T Consensus 2 ~CPrIl--------m~CK~DsDC 16 (29)
T 1lu0_A 2 VCPRIL--------LECKKDSDC 16 (29)
T ss_dssp CCCSCC--------CBCSSGGGS
T ss_pred CCchhh--------hhccccccc
Confidence 389999 899998874
No 374
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=23.58 E-value=1.4e+02 Score=28.77 Aligned_cols=10 Identities=30% Similarity=0.079 Sum_probs=5.1
Q ss_pred CeEEEcCCCC
Q 013019 250 GHIVTTTDCY 259 (451)
Q Consensus 250 D~VIv~~~~Y 259 (451)
|-|++..|.+
T Consensus 69 D~V~i~tp~~ 78 (352)
T 3kux_A 69 DLIVIPTPND 78 (352)
T ss_dssp CEEEECSCTT
T ss_pred CEEEEeCChH
Confidence 5555555443
No 375
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=23.57 E-value=65 Score=30.79 Aligned_cols=67 Identities=19% Similarity=0.319 Sum_probs=40.6
Q ss_pred CeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC------C---CHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHH
Q 013019 250 GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (451)
Q Consensus 250 D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~------~---D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~Iae 320 (451)
..+++..+.|+- +++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+..
T Consensus 184 ~~~v~~H~af~Y-------f~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ 249 (294)
T 3hh8_A 184 KLIVTSEGCFKY-------FSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVIKPSALFVESSVDR-------RPMET 249 (294)
T ss_dssp CCEEEEESCCHH-------HHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHSCCSCEEEETTSCS-------HHHHH
T ss_pred cEEEEECChHHH-------HHHHcCCceeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCc-------HHHHH
Confidence 557776666652 23456666544311 1 3555666666666889998765543 34556
Q ss_pred HHHhcCCEEE
Q 013019 321 LCHKKGAIVC 330 (451)
Q Consensus 321 lA~~~g~~lV 330 (451)
++++.|+.++
T Consensus 250 ia~~~g~~v~ 259 (294)
T 3hh8_A 250 VSKDSGIPIY 259 (294)
T ss_dssp HHHHHCCCEE
T ss_pred HHHHhCCcEE
Confidence 7788888775
No 376
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=23.56 E-value=2.7e+02 Score=28.09 Aligned_cols=93 Identities=15% Similarity=0.128 Sum_probs=55.2
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCC
Q 013019 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (451)
Q Consensus 226 e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesP 305 (451)
..+++++.|-.|...+ ..|++.|-+|.+.++..... +.......++++..-+ .+.++ ++. ..+|+. +|
T Consensus 13 ~~vlVvGgG~va~~k~-~~L~~~ga~V~vi~~~~~~~---~~~l~~~~~i~~~~~~-~~~~~----l~~--~~lVi~-at 80 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKA-RLLLEAGARLTVNALTFIPQ---FTVWANEGMLTLVEGP-FDETL----LDS--CWLAIA-AT 80 (457)
T ss_dssp CEEEEECCSHHHHHHH-HHHHHTTBEEEEEESSCCHH---HHHHHTTTSCEEEESS-CCGGG----GTT--CSEEEE-CC
T ss_pred CEEEEECCCHHHHHHH-HHHHhCcCEEEEEcCCCCHH---HHHHHhcCCEEEEECC-CCccc----cCC--ccEEEE-cC
Confidence 5688899998776554 56778888877766654332 2233333345544322 22222 222 456666 45
Q ss_pred CCCccccccHHHHHHHHHhcCCEE-EEecC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIV-CIDGT 334 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~l-VVD~t 334 (451)
.++.. -..+.+.|+++|+++ ++|+.
T Consensus 81 ~~~~~----n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 81 DDDTV----NQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp SCHHH----HHHHHHHHHHTTCEEEETTCT
T ss_pred CCHHH----HHHHHHHHHHcCCEEEECCCc
Confidence 54311 357899999999986 56765
No 377
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=23.43 E-value=1.2e+02 Score=29.54 Aligned_cols=45 Identities=13% Similarity=0.115 Sum_probs=28.1
Q ss_pred HHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC
Q 013019 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 286 d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t 334 (451)
+.+.++++.. +-|++|-|- .....+.++|.++|+++|+.+.+.-.
T Consensus 103 ~~~~~al~aG--khVl~EKPl--a~~~~ea~~l~~~a~~~g~~l~v~~~ 147 (361)
T 3u3x_A 103 ELAIRAMQHG--KDVLVDKPG--MTSFDQLAKLRRVQAETGRIFSILYS 147 (361)
T ss_dssp HHHHHHHHTT--CEEEEESCS--CSSHHHHHHHHHHHHTTCCCEEEECH
T ss_pred HHHHHHHHCC--CeEEEeCCC--CCCHHHHHHHHHHHHHcCCEEEEech
Confidence 3444555442 567777665 33445677777888888877777654
No 378
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=23.42 E-value=43 Score=35.20 Aligned_cols=32 Identities=31% Similarity=0.487 Sum_probs=27.0
Q ss_pred CCCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 305 PsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
|..-.|...|++++++.||++|+.||+|-++.
T Consensus 211 idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 242 (583)
T 1ea9_C 211 IDPQFGDKDTLKKLVDLCHERGIRVLLDAVFN 242 (583)
T ss_dssp CCTTTCCHHHHHHHHHHHTTTTCEEEEECCCS
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEccc
Confidence 33346888899999999999999999999853
No 379
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=23.42 E-value=40 Score=35.29 Aligned_cols=28 Identities=14% Similarity=0.101 Sum_probs=25.8
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
-.|+..|+++|++.||++|+.||+|-++
T Consensus 88 ~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 115 (570)
T 1m53_A 88 EYGTMEDFDSLVAEMKKRNMRLMIDVVI 115 (570)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4788899999999999999999999985
No 380
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=23.29 E-value=73 Score=30.17 Aligned_cols=68 Identities=18% Similarity=0.296 Sum_probs=34.4
Q ss_pred CCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC---------CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHH
Q 013019 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (451)
Q Consensus 248 ~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~---------~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~I 318 (451)
++..+++..+.|+- +++.+|++...+.. .++.+|.+.++++++++||.|.-.++ +.+
T Consensus 176 ~~~~~v~~H~af~Y-------f~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 241 (284)
T 3cx3_A 176 TQKTFVTQHTAFSY-------LAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTYKVKTIFTESNASS-------KVA 241 (284)
T ss_dssp SCCCEEEEESCCHH-------HHHHTTCCEEEEECSSTTCCCCSHHHHHHHHHHHHTTCCCEEECSSSCC-------HHH
T ss_pred CCCEEEEECCchHH-------HHHHcCCEEeeccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCc-------HHH
Confidence 45678887666652 34566766443211 12444555555445666666543322 223
Q ss_pred HHHHHhcCCEE
Q 013019 319 SDLCHKKGAIV 329 (451)
Q Consensus 319 aelA~~~g~~l 329 (451)
..++++.|+.+
T Consensus 242 ~~ia~~~g~~v 252 (284)
T 3cx3_A 242 ETLVKSTGVGL 252 (284)
T ss_dssp HHHHSSSSCCE
T ss_pred HHHHHHcCCeE
Confidence 33455556554
No 381
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=23.18 E-value=42 Score=35.02 Aligned_cols=28 Identities=14% Similarity=0.151 Sum_probs=25.6
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
-.|+..|+++|++.||++|+.||+|-++
T Consensus 75 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 102 (557)
T 1zja_A 75 EYGTMEDFDRLMAELKKRGMRLMVDVVI 102 (557)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3788899999999999999999999985
No 382
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=23.17 E-value=2.5e+02 Score=24.30 Aligned_cols=79 Identities=14% Similarity=0.061 Sum_probs=46.1
Q ss_pred HHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCC-HHHHHHhhcCCCeEEEEEeCCCCC-cc---cccc
Q 013019 240 VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD-MEGLEAALNNNNVSLFFTESPTNP-FL---RCVD 314 (451)
Q Consensus 240 ~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D-~d~Le~ai~~~~tklV~lesPsNP-tG---~v~D 314 (451)
.++..|++.|.+|++..-.-.. .....++++...|..| .+++++++++ ..+|+.+..... .. .+.-
T Consensus 15 ~l~~~L~~~g~~V~~~~R~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~~~--~d~vi~~ag~~~~~~~~~n~~~ 85 (219)
T 3dqp_A 15 SLLKSLSTTDYQIYAGARKVEQ-------VPQYNNVKAVHFDVDWTPEEMAKQLHG--MDAIINVSGSGGKSLLKVDLYG 85 (219)
T ss_dssp HHHHHHTTSSCEEEEEESSGGG-------SCCCTTEEEEECCTTSCHHHHHTTTTT--CSEEEECCCCTTSSCCCCCCHH
T ss_pred HHHHHHHHCCCEEEEEECCccc-------hhhcCCceEEEecccCCHHHHHHHHcC--CCEEEECCcCCCCCcEeEeHHH
Confidence 3345677888887765432111 1111467777778889 9999999874 566665443221 11 1112
Q ss_pred HHHHHHHHHhcCC
Q 013019 315 VKLVSDLCHKKGA 327 (451)
Q Consensus 315 L~~IaelA~~~g~ 327 (451)
...+.+.|++.++
T Consensus 86 ~~~l~~a~~~~~~ 98 (219)
T 3dqp_A 86 AVKLMQAAEKAEV 98 (219)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCC
Confidence 4567888887764
No 383
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=23.13 E-value=2.8e+02 Score=26.70 Aligned_cols=131 Identities=13% Similarity=0.100 Sum_probs=56.1
Q ss_pred ccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHh---hhcCCcEEEEe
Q 013019 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV---LPKMGITATVI 280 (451)
Q Consensus 204 Y~R~~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~---l~~~Gi~v~~v 280 (451)
-+|...|..+.+++.-...-|+...- ..+.-++ +++ ..||.. +++....++.. .....+++.
T Consensus 151 ~TRKt~Pglr~l~kyAv~~GGg~nHR------~gL~d~v--lik-dNHi~~----~G~i~~Av~~~r~~~p~~~ieVE-- 215 (298)
T 3gnn_A 151 DTRKTLPGLRLAQKYAVRVGGGANQR------LALYAGI--LIK-ENHIAA----AGGVGEALDAAFALNAEVPVQIE-- 215 (298)
T ss_dssp CCSCCCTTCHHHHHHHHHHTTCCCC--------------------------------CHHHHHHHHHHHC--CCCEEE--
T ss_pred EecCCCcchHHHHHhhHHhcCcccee------cCCCcEE--EEe-HHHHHH----cCCHHHHHHHHHHhCCCCCEEEE--
Confidence 46778888888877666554442211 0111111 111 234443 23333333322 222223333
Q ss_pred CCCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCCCCCcc-ccccCCCcEE-EECCccc
Q 013019 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLV-LHSATKF 358 (451)
Q Consensus 281 d~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~-~pl~~GaDiV-v~S~SK~ 358 (451)
..++++++++++.. ...|.+.+.+ ..++++.++... .++.+.+=.= -++... ...+.|+|++ +.++++.
T Consensus 216 -vdtlde~~eAl~aG-aD~I~LDn~~-----~~~l~~av~~i~-~~v~ieaSGG-I~~~~i~~~a~tGVD~isvG~lt~s 286 (298)
T 3gnn_A 216 -VETLDQLRTALAHG-ARSVLLDNFT-----LDMMRDAVRVTE-GRAVLEVSGG-VNFDTVRAIAETGVDRISIGALTKD 286 (298)
T ss_dssp -ESSHHHHHHHHHTT-CEEEEEESCC-----HHHHHHHHHHHT-TSEEEEEESS-CSTTTHHHHHHTTCSEEECGGGGTS
T ss_pred -eCCHHHHHHHHHcC-CCEEEECCCC-----HHHHHHHHHHhC-CCCeEEEEcC-CCHHHHHHHHHcCCCEEEECCeecC
Confidence 45678888888764 7888886532 234444444432 1233222110 011111 2224588877 5566654
No 384
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=23.00 E-value=1.8e+02 Score=26.65 Aligned_cols=85 Identities=24% Similarity=0.149 Sum_probs=46.7
Q ss_pred HHHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCCCCc-c---ccccHH
Q 013019 242 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPF-L---RCVDVK 316 (451)
Q Consensus 242 l~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPsNPt-G---~v~DL~ 316 (451)
+..|++.| .+|++....-... . . ..+...++++...|..|.+.++++++. +..|+......+. . .+.-..
T Consensus 22 ~~~L~~~g~~~V~~~~R~~~~~-~-~-~~l~~~~~~~~~~D~~d~~~l~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~ 96 (299)
T 2wm3_A 22 ARTLLEDGTFKVRVVTRNPRKK-A-A-KELRLQGAEVVQGDQDDQVIMELALNG--AYATFIVTNYWESCSQEQEVKQGK 96 (299)
T ss_dssp HHHHHHHCSSEEEEEESCTTSH-H-H-HHHHHTTCEEEECCTTCHHHHHHHHTT--CSEEEECCCHHHHTCHHHHHHHHH
T ss_pred HHHHHhcCCceEEEEEcCCCCH-H-H-HHHHHCCCEEEEecCCCHHHHHHHHhc--CCEEEEeCCCCccccchHHHHHHH
Confidence 44566667 5665543211111 0 0 112334788877888899999999874 5666654332110 0 011245
Q ss_pred HHHHHHHhcCC-EEEE
Q 013019 317 LVSDLCHKKGA-IVCI 331 (451)
Q Consensus 317 ~IaelA~~~g~-~lVV 331 (451)
.+.+.|++.|+ .+|.
T Consensus 97 ~~~~aa~~~gv~~iv~ 112 (299)
T 2wm3_A 97 LLADLARRLGLHYVVY 112 (299)
T ss_dssp HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 67788888776 3444
No 385
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=22.99 E-value=48 Score=35.11 Aligned_cols=28 Identities=14% Similarity=0.153 Sum_probs=25.8
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
..|...|++++++.||++|+.||+|-++
T Consensus 204 ~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 231 (599)
T 3bc9_A 204 KYGTKGELENAIDALHNNDIKVYFDAVL 231 (599)
T ss_dssp TTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 4788899999999999999999999985
No 386
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=22.90 E-value=88 Score=29.10 Aligned_cols=34 Identities=9% Similarity=-0.129 Sum_probs=29.1
Q ss_pred eEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEE
Q 013019 297 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (451)
Q Consensus 297 tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVV 331 (451)
+..|++|-- |..|....++++.++|++||+.++.
T Consensus 179 Pa~VicEi~-~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 179 PITTICEMM-GDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp SEEEEEEEB-CTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred ceEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 677777765 6789999999999999999998764
No 387
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=22.87 E-value=1.9e+02 Score=26.61 Aligned_cols=77 Identities=16% Similarity=0.194 Sum_probs=39.0
Q ss_pred cEEEeCCHHHHHH-HHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEE--EEeCCCCHHHHHHhhcC-----CCeE
Q 013019 227 STVIMASGMSAST-VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA--TVIDPADMEGLEAALNN-----NNVS 298 (451)
Q Consensus 227 ~~vv~sSG~aAi~-~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v--~~vd~~D~d~Le~ai~~-----~~tk 298 (451)
..+++++|+..|- .+...|.+.|-+|++....-......+...+...|.++ ...|..|.+++++++++ .++.
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 111 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLD 111 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence 3455555554432 33456778898887753222111122222233344443 34577788887776652 1356
Q ss_pred EEEEe
Q 013019 299 LFFTE 303 (451)
Q Consensus 299 lV~le 303 (451)
+++-+
T Consensus 112 ~lvnn 116 (271)
T 3v2g_A 112 ILVNS 116 (271)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 66543
No 388
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=22.82 E-value=1.2e+02 Score=28.76 Aligned_cols=44 Identities=16% Similarity=0.147 Sum_probs=23.7
Q ss_pred HHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC
Q 013019 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 287 ~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t 334 (451)
...++++.. +-|++|-|- +....+.++|.++|+++|+.+.+.-.
T Consensus 82 ~~~~al~aG--khVl~EKP~--a~~~~e~~~l~~~a~~~g~~~~v~~~ 125 (336)
T 2p2s_A 82 LALRTLDAG--KDFFTAKPP--LTTLEQLDAVQRRVAETGRKFAVYFN 125 (336)
T ss_dssp HHHHHHHTT--CEEEECSSC--CSCHHHHHHHHHHHHHHCCCEEECCT
T ss_pred HHHHHHHCC--CcEEEeCCC--CCCHHHHHHHHHHHHHcCCEEEEeec
Confidence 334444432 345556554 23334566777777777766665543
No 389
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=22.75 E-value=42 Score=34.98 Aligned_cols=28 Identities=14% Similarity=0.081 Sum_probs=25.5
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
-.|+..|+++|++.||++|+.||+|-++
T Consensus 74 ~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 101 (558)
T 1uok_A 74 EFGTMEDWDELLHEMHERNMKLMMDLVV 101 (558)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3688889999999999999999999885
No 390
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=22.63 E-value=43 Score=35.97 Aligned_cols=28 Identities=32% Similarity=0.241 Sum_probs=25.8
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
-.|...|+++|++-||++|+.||+|-++
T Consensus 107 ~~Gt~~df~~Lv~~aH~~GIkVilD~V~ 134 (680)
T 1cyg_A 107 FFGTLSDFQRLVDAAHAKGIKVIIDFAP 134 (680)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4788999999999999999999999885
No 391
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=22.47 E-value=2.8e+02 Score=24.43 Aligned_cols=91 Identities=9% Similarity=-0.039 Sum_probs=49.3
Q ss_pred EEEeCCHHHHH-HHHHHHHccCC-CeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCC
Q 013019 228 TVIMASGMSAS-TVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (451)
Q Consensus 228 ~vv~sSG~aAi-~~al~all~~G-D~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesP 305 (451)
.+++++|+..| ..++..|++.| -+|++..-.-.. + ..+...++.+...|..|.++++++++. +..|+.+..
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~----~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vv~~a~ 97 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAK----I-HKPYPTNSQIIMGDVLNHAALKQAMQG--QDIVYANLT 97 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGG----S-CSSCCTTEEEEECCTTCHHHHHHHHTT--CSEEEEECC
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhh----h-cccccCCcEEEEecCCCHHHHHHHhcC--CCEEEEcCC
Confidence 34444433222 23345677888 466553321110 0 011223566666788899999999974 566665332
Q ss_pred CCCccccccHHHHHHHHHhcCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGA 327 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~ 327 (451)
. .......+.+.+.+++.++
T Consensus 98 ~--~~~~~~~~~~~~~~~~~~~ 117 (236)
T 3qvo_A 98 G--EDLDIQANSVIAAMKACDV 117 (236)
T ss_dssp S--TTHHHHHHHHHHHHHHTTC
T ss_pred C--CchhHHHHHHHHHHHHcCC
Confidence 2 1122235678888888764
No 392
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=22.41 E-value=44 Score=35.14 Aligned_cols=31 Identities=32% Similarity=0.477 Sum_probs=26.8
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
..-.|...|++++++.||++|+.||+|-++.
T Consensus 216 dp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 246 (588)
T 1j0h_A 216 DPHFGDKETLKTLIDRCHEKGIRVMLDAVFN 246 (588)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 3347888999999999999999999999853
No 393
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=22.36 E-value=2.7e+02 Score=27.11 Aligned_cols=85 Identities=5% Similarity=0.000 Sum_probs=59.0
Q ss_pred ccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-CCCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHh
Q 013019 246 VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK 324 (451)
Q Consensus 246 l~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd-~~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~ 324 (451)
+.+-+- .+..|.. ....+..+.+..++++-..+ ..+++++++.++.....+|.+. + +-.|-+....+++++|++
T Consensus 212 l~~~~i-~iE~P~~--~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik-~-~~~GGit~~~~i~~~A~~ 286 (379)
T 2rdx_A 212 TRDLDY-ILEQPCR--SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLK-I-SNLGGLSKARRTRDFLID 286 (379)
T ss_dssp TTTSCC-EEECCSS--SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEE-T-TTTTSHHHHHHHHHHHHH
T ss_pred HHhCCe-EEeCCcC--CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEe-c-cccCCHHHHHHHHHHHHH
Confidence 444344 7777765 55555555555677766443 2478888888876556777774 2 347888888999999999
Q ss_pred cCCEEEEecCC
Q 013019 325 KGAIVCIDGTF 335 (451)
Q Consensus 325 ~g~~lVVD~tf 335 (451)
+|+.+++=..+
T Consensus 287 ~g~~~~~~~~~ 297 (379)
T 2rdx_A 287 NRMPVVAEDSW 297 (379)
T ss_dssp TTCCEEEECSB
T ss_pred cCCeEEEeecc
Confidence 99988887543
No 394
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=22.32 E-value=49 Score=36.78 Aligned_cols=30 Identities=23% Similarity=0.129 Sum_probs=27.0
Q ss_pred CCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 307 NPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 307 NPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
...|...|++++++.||++|+.||+|-++.
T Consensus 687 ~~~Gt~~df~~lv~~~H~~GI~VilD~V~N 716 (844)
T 3aie_A 687 NKYGTADDLVKAIKALHSKGIKVMADWVPD 716 (844)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 567888999999999999999999999853
No 395
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=22.29 E-value=42 Score=35.25 Aligned_cols=30 Identities=20% Similarity=0.377 Sum_probs=26.2
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
..-.|...|++++++.||++|+.||+|-++
T Consensus 213 d~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~ 242 (585)
T 1wzl_A 213 DPQFGDLPTFRRLVDEAHRRGIKIILDAVF 242 (585)
T ss_dssp CTTTCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 334788889999999999999999999875
No 396
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=22.24 E-value=3.4e+02 Score=24.72 Aligned_cols=64 Identities=16% Similarity=0.220 Sum_probs=42.8
Q ss_pred CHHHHHHhhcCCCeEEEEEeCCC--CCccccccHHHHHHHHHhcCCEEEEecCCCCCCccccccCCCcEEEE
Q 013019 284 DMEGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 284 D~d~Le~ai~~~~tklV~lesPs--NPtG~v~DL~~IaelA~~~g~~lVVD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
+.+++++++... ...|++.... +| ..++++.+.++++|+.+++|-.-. .......+.|+|++..
T Consensus 90 ~~~~i~~~~~~G-ad~V~l~~~~~~~p----~~l~~~i~~~~~~g~~v~~~v~t~-eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 90 FLDDVDALAQAG-AAIIAVDGTARQRP----VAVEALLARIHHHHLLTMADCSSV-DDGLACQRLGADIIGT 155 (232)
T ss_dssp SHHHHHHHHHHT-CSEEEEECCSSCCS----SCHHHHHHHHHHTTCEEEEECCSH-HHHHHHHHTTCSEEEC
T ss_pred cHHHHHHHHHcC-CCEEEECccccCCH----HHHHHHHHHHHHCCCEEEEeCCCH-HHHHHHHhCCCCEEEE
Confidence 356666666543 6677665443 33 478999999999999999986421 1223455789998863
No 397
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=22.18 E-value=3.8e+02 Score=23.07 Aligned_cols=92 Identities=12% Similarity=0.087 Sum_probs=49.0
Q ss_pred cEEEeC-CHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCC
Q 013019 227 STVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (451)
Q Consensus 227 ~~vv~s-SG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesP 305 (451)
..++++ +|.-+- .++..|++.|.+|++....-... ..+ ..++++...|..|.+++++++++ +.+|+....
T Consensus 6 ~ilItGatG~iG~-~l~~~L~~~g~~V~~~~r~~~~~-----~~~-~~~~~~~~~Dl~d~~~~~~~~~~--~d~vi~~a~ 76 (227)
T 3dhn_A 6 KIVLIGASGFVGS-ALLNEALNRGFEVTAVVRHPEKI-----KIE-NEHLKVKKADVSSLDEVCEVCKG--ADAVISAFN 76 (227)
T ss_dssp EEEEETCCHHHHH-HHHHHHHTTTCEEEEECSCGGGC-----CCC-CTTEEEECCCTTCHHHHHHHHTT--CSEEEECCC
T ss_pred EEEEEcCCchHHH-HHHHHHHHCCCEEEEEEcCcccc-----hhc-cCceEEEEecCCCHHHHHHHhcC--CCEEEEeCc
Confidence 345554 344332 33456677888877765332110 001 13556655677899999999974 556655332
Q ss_pred CCC-cccc-----ccHHHHHHHHHhcCC
Q 013019 306 TNP-FLRC-----VDVKLVSDLCHKKGA 327 (451)
Q Consensus 306 sNP-tG~v-----~DL~~IaelA~~~g~ 327 (451)
... .-.. .-...+.+.|++.++
T Consensus 77 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 104 (227)
T 3dhn_A 77 PGWNNPDIYDETIKVYLTIIDGVKKAGV 104 (227)
T ss_dssp C------CCSHHHHHHHHHHHHHHHTTC
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhCC
Confidence 211 0011 124567788888775
No 398
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=22.14 E-value=45 Score=35.21 Aligned_cols=28 Identities=18% Similarity=0.105 Sum_probs=25.7
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
-.|...|+++|++.||++|+.||+|-++
T Consensus 194 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 221 (601)
T 3edf_A 194 RYGSNEDFVRLSTEARKRGMGLIQDVVL 221 (601)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEEECC
Confidence 3788889999999999999999999985
No 399
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=22.11 E-value=44 Score=35.89 Aligned_cols=30 Identities=20% Similarity=0.120 Sum_probs=26.6
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
..-.|...|+++|++.||++|+.||+|-++
T Consensus 109 dp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 138 (686)
T 1d3c_A 109 NPAYGTIADFQNLIAAAHAKNIKVIIDFAP 138 (686)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEeCc
Confidence 334788999999999999999999999885
No 400
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=22.02 E-value=3.9e+02 Score=23.33 Aligned_cols=73 Identities=16% Similarity=0.116 Sum_probs=45.1
Q ss_pred EEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCC
Q 013019 228 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (451)
Q Consensus 228 ~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPs 306 (451)
.++++.|.-+...+ ..|.+.|..|++-+.. ...++......|+.+..-|..+.+.++++--+ +.++|++.+++
T Consensus 3 iiIiG~G~~G~~la-~~L~~~g~~v~vid~~----~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~-~ad~vi~~~~~ 75 (218)
T 3l4b_C 3 VIIIGGETTAYYLA-RSMLSRKYGVVIINKD----RELCEEFAKKLKATIIHGDGSHKEILRDAEVS-KNDVVVILTPR 75 (218)
T ss_dssp EEEECCHHHHHHHH-HHHHHTTCCEEEEESC----HHHHHHHHHHSSSEEEESCTTSHHHHHHHTCC-TTCEEEECCSC
T ss_pred EEEECCCHHHHHHH-HHHHhCCCeEEEEECC----HHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcc-cCCEEEEecCC
Confidence 56778777554433 4556677776665432 22233333445788777788888888876333 26788876655
No 401
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=21.93 E-value=1.3e+02 Score=29.13 Aligned_cols=9 Identities=22% Similarity=0.294 Sum_probs=4.6
Q ss_pred CeEEEcCCC
Q 013019 250 GHIVTTTDC 258 (451)
Q Consensus 250 D~VIv~~~~ 258 (451)
|-|++..|.
T Consensus 67 D~V~i~tp~ 75 (358)
T 3gdo_A 67 ELVIVTTPS 75 (358)
T ss_dssp CEEEECSCT
T ss_pred CEEEEcCCc
Confidence 555555544
No 402
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=21.91 E-value=1.4e+02 Score=28.79 Aligned_cols=90 Identities=12% Similarity=0.133 Sum_probs=49.0
Q ss_pred hHHHHHHHHHhhh--CCCcEEEeCCHHHHHHHHH-HHHccCCCeEEEcCCCCcchHHHHHHhhhcC-CcEEEEeCCCCHH
Q 013019 211 TTVVVEEKMSALE--GAESTVIMASGMSASTVML-LALVPAGGHIVTTTDCYRKTRIFIETVLPKM-GITATVIDPADME 286 (451)
Q Consensus 211 t~~~Lee~LA~l~--gae~~vv~sSG~aAi~~al-~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~-Gi~v~~vd~~D~d 286 (451)
..+.+++.+..+. +.+..++++.|++...... ..++. +.. |+.+..+.. .+
T Consensus 9 ~~~~i~~~v~~i~~~~~~~I~i~G~GtS~~aa~~~~~~l~-----------------------~~~~g~~~~~~~~--~e 63 (329)
T 3eua_A 9 VNREVQAFLQDLKGKTIDHVFFVACGGSSAIMYPSKYVFD-----------------------RESKSINSDLYSA--NE 63 (329)
T ss_dssp SCHHHHHHHHHHTTCCCCEEEEEECTHHHHTTHHHHHHHH-----------------------HHCSSCEEEEEEH--HH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEccHHHHHHHHHHHHHH-----------------------HhcCCCeEEEEcc--HH
Confidence 4456777777676 6788888999986543221 11111 011 333332221 11
Q ss_pred HHHH---hhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEE
Q 013019 287 GLEA---ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (451)
Q Consensus 287 ~Le~---ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lV 330 (451)
-... .++++ .-+|.+ +-.|...|+-+..+.|+++|+.+|
T Consensus 64 ~~~~~~~~l~~~-dlvI~i----S~SG~T~e~l~a~~~ak~~Ga~~i 105 (329)
T 3eua_A 64 FIQRNPVQLGEK-SLVILC----SHSGNTPETVKAAAFARGKGALTI 105 (329)
T ss_dssp HHHHCCTTCSTT-EEEEEE----ESSSCCHHHHHHHHHHHHTTCEEE
T ss_pred HHhcCccCCCCC-cEEEEE----cCCCCCHHHHHHHHHHHHCCCCEE
Confidence 1111 13332 444444 235888888899999999998754
No 403
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=21.91 E-value=1.3e+02 Score=22.99 Aligned_cols=46 Identities=17% Similarity=0.221 Sum_probs=33.1
Q ss_pred HHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC
Q 013019 285 MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 285 ~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t 334 (451)
..+..++++..+.++|++..=..| .-...|..+|+++|++++.-.+
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~----~~~~~i~~lc~~~~Ip~~~v~s 61 (82)
T 3v7e_A 16 TKQTVKALKRGSVKEVVVAKDADP----ILTSSVVSLAEDQGISVSMVES 61 (82)
T ss_dssp HHHHHHHHTTTCEEEEEEETTSCH----HHHHHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHHHHcCCeeEEEEeCCCCH----HHHHHHHHHHHHcCCCEEEECC
Confidence 466777887777899998533333 2356788899999999887654
No 404
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=21.83 E-value=4.2e+02 Score=26.97 Aligned_cols=84 Identities=15% Similarity=0.088 Sum_probs=51.7
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCC
Q 013019 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (451)
Q Consensus 226 e~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesP 305 (451)
+.++=+.+|.....+.+...+..+.+|+..+.. ......+...+++.|+.+.++ ..|..++...... ...+|++..|
T Consensus 103 ~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis-~~~l~~a~~n~~r~G~~v~~~-~~Da~~l~~~~~~-~FD~Il~D~P 179 (464)
T 3m6w_A 103 ERVLDLAAAPGGKTTHLAARMGGKGLLLANEVD-GKRVRGLLENVERWGAPLAVT-QAPPRALAEAFGT-YFHRVLLDAP 179 (464)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSC-HHHHHHHHHHHHHHCCCCEEE-CSCHHHHHHHHCS-CEEEEEEECC
T ss_pred CEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECC-HHHHHHHHHHHHHcCCeEEEE-ECCHHHhhhhccc-cCCEEEECCC
Confidence 445546777766666666666655577776643 333444555566677664433 3466666544444 4789999999
Q ss_pred CCCcccc
Q 013019 306 TNPFLRC 312 (451)
Q Consensus 306 sNPtG~v 312 (451)
.+.+|.+
T Consensus 180 cSg~G~~ 186 (464)
T 3m6w_A 180 CSGEGMF 186 (464)
T ss_dssp CCCGGGT
T ss_pred cCCcccc
Confidence 8777653
No 405
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=21.78 E-value=1.4e+02 Score=28.99 Aligned_cols=10 Identities=10% Similarity=0.049 Sum_probs=5.6
Q ss_pred CeEEEcCCCC
Q 013019 250 GHIVTTTDCY 259 (451)
Q Consensus 250 D~VIv~~~~Y 259 (451)
|-|++..|..
T Consensus 67 D~V~i~tp~~ 76 (359)
T 3e18_A 67 DAVLIATPND 76 (359)
T ss_dssp CEEEECSCGG
T ss_pred CEEEEcCCcH
Confidence 5666655543
No 406
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=21.68 E-value=1.7e+02 Score=26.70 Aligned_cols=76 Identities=9% Similarity=0.123 Sum_probs=38.9
Q ss_pred cEEEeCCHHHHHH-HHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEE--EEeCCCCHHHHHHhhcC-----CCeE
Q 013019 227 STVIMASGMSAST-VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA--TVIDPADMEGLEAALNN-----NNVS 298 (451)
Q Consensus 227 ~~vv~sSG~aAi~-~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v--~~vd~~D~d~Le~ai~~-----~~tk 298 (451)
..+++++|+..|- .+...|.+.|-+|++....-......+...+...+.++ ...|..|.+++++++++ .++.
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 98 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLD 98 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3455555554442 33456778898887743221111222222233344443 34577788877776642 1356
Q ss_pred EEEE
Q 013019 299 LFFT 302 (451)
Q Consensus 299 lV~l 302 (451)
+++-
T Consensus 99 ~lvn 102 (270)
T 3is3_A 99 IAVS 102 (270)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 6654
No 407
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=21.63 E-value=46 Score=35.77 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=26.3
Q ss_pred CCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 307 NPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 307 NPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
.-.|...|+++|++.||++|+.||+|-++
T Consensus 102 p~~Gt~~df~~Lv~~aH~~GikVilD~V~ 130 (686)
T 1qho_A 102 EHFGNWTTFDTLVNDAHQNGIKVIVDFVP 130 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 34788999999999999999999999985
No 408
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=21.62 E-value=45 Score=34.77 Aligned_cols=28 Identities=21% Similarity=0.240 Sum_probs=25.4
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
..|...|++++++.||++|+.||+|-++
T Consensus 74 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 101 (555)
T 2ze0_A 74 EFGTMDDFDELLAQAHRRGLKVILDLVI 101 (555)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3688889999999999999999999874
No 409
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=21.60 E-value=1.6e+02 Score=29.02 Aligned_cols=112 Identities=7% Similarity=0.067 Sum_probs=70.2
Q ss_pred HHhhhCCCcEEEe--CCHH---HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-CCHHHHHHhh
Q 013019 219 MSALEGAESTVIM--ASGM---SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAAL 292 (451)
Q Consensus 219 LA~l~gae~~vv~--sSG~---aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-~D~d~Le~ai 292 (451)
+.+..|.+-.+.+ ..|. +|+.. +.. +.+-+-..+.+|........+..+.+..++++-..+. .+++++++.+
T Consensus 192 vr~a~G~d~~l~vD~n~~~~~~~a~~~-~~~-l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i 269 (392)
T 2poz_A 192 VRDAAGPEIELMVDLSGGLTTDETIRF-CRK-IGELDICFVEEPCDPFDNGALKVISEQIPLPIAVGERVYTRFGFRKIF 269 (392)
T ss_dssp HHHHHCTTSEEEEECTTCSCHHHHHHH-HHH-HGGGCEEEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHH
T ss_pred HHHhcCCCCEEEEECCCCCCHHHHHHH-HHH-HHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHH
Confidence 3344565544444 2232 34433 333 4444556777777655555565555556777665443 3578888888
Q ss_pred cCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC
Q 013019 293 NNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 293 ~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t 334 (451)
+.....+|.+. -+-.|-+....+++++|+++|+.+++=..
T Consensus 270 ~~~~~d~v~ik--~~~~GGit~~~~i~~~A~~~g~~~~~h~~ 309 (392)
T 2poz_A 270 ELQACGIIQPD--IGTAGGLMETKKICAMAEAYNMRVAPHVC 309 (392)
T ss_dssp TTTCCSEECCC--TTTSSCHHHHHHHHHHHHTTTCEECCCCC
T ss_pred HcCCCCEEecC--ccccCCHHHHHHHHHHHHHcCCeEecCCC
Confidence 76546666653 24578888899999999999999888543
No 410
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=21.60 E-value=45 Score=37.26 Aligned_cols=31 Identities=29% Similarity=0.469 Sum_probs=26.6
Q ss_pred CCCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 305 PsNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
|..|.+.+.+++++++.||++|+-||+|-++
T Consensus 362 p~~~~~~~~efk~lV~~~H~~GI~VILDvV~ 392 (877)
T 3faw_A 362 PKDPSARIAELKQLIHDIHKRGMGVILDVVY 392 (877)
T ss_dssp TTSTTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCcchHHHHHHHHHHHHHHcCCEEEEEEee
Confidence 4455566789999999999999999999986
No 411
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=21.59 E-value=1.4e+02 Score=28.26 Aligned_cols=15 Identities=7% Similarity=0.224 Sum_probs=6.3
Q ss_pred HHHHHHHHHhcCCEE
Q 013019 315 VKLVSDLCHKKGAIV 329 (451)
Q Consensus 315 L~~IaelA~~~g~~l 329 (451)
.++|.++|+++|+.+
T Consensus 102 ~~~l~~~a~~~g~~~ 116 (332)
T 2glx_A 102 AREMVVAAREAGVVL 116 (332)
T ss_dssp HHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHcCCEE
Confidence 344444444444433
No 412
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=21.55 E-value=2e+02 Score=29.58 Aligned_cols=89 Identities=19% Similarity=0.142 Sum_probs=48.5
Q ss_pred HHHHHhhhcC-CcEEEEeCCCCHHHHHHhhcCCCeEEEEEe-CCCCCccc-------cccH---HHHHHHHHhcCCEEEE
Q 013019 264 IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTNPFLR-------CVDV---KLVSDLCHKKGAIVCI 331 (451)
Q Consensus 264 ~~l~~~l~~~-Gi~v~~vd~~D~d~Le~ai~~~~tklV~le-sPsNPtG~-------v~DL---~~IaelA~~~g~~lVV 331 (451)
..++.+.+.+ ++.+..-...+.+..+.+++.. ...|.+. .|....+. ..++ .++++.+++.++++|.
T Consensus 261 ~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aG-aD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa 339 (496)
T 4fxs_A 261 QRIRETRAAYPHLEIIGGNVATAEGARALIEAG-VSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIA 339 (496)
T ss_dssp HHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHT-CSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred HHHHHHHHHCCCceEEEcccCcHHHHHHHHHhC-CCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEE
Confidence 3344444444 4444332344567666666543 6677663 33322111 2233 4555555677999999
Q ss_pred ecCCCCCC-ccccccCCCcEEEE
Q 013019 332 DGTFATPL-NQKALSLGADLVLH 353 (451)
Q Consensus 332 D~tfa~~~-~~~pl~~GaDiVv~ 353 (451)
|.=..++- ..+.+.+|+|.|+-
T Consensus 340 ~GGI~~~~di~kala~GAd~V~i 362 (496)
T 4fxs_A 340 DGGIRFSGDISKAIAAGASCVMV 362 (496)
T ss_dssp ESCCCSHHHHHHHHHTTCSEEEE
T ss_pred eCCCCCHHHHHHHHHcCCCeEEe
Confidence 97554432 23456778887764
No 413
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=21.55 E-value=3.9e+02 Score=26.23 Aligned_cols=112 Identities=13% Similarity=0.036 Sum_probs=70.1
Q ss_pred HHhhhCCCcEEEe--CCHH---HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-CCHHHHHHhh
Q 013019 219 MSALEGAESTVIM--ASGM---SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAAL 292 (451)
Q Consensus 219 LA~l~gae~~vv~--sSG~---aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-~D~d~Le~ai 292 (451)
+.+..|.+-.+.+ ..|. +|+..+ .. +.+-+-..+.+|........+..+.+..++++-..+. .+++++++.+
T Consensus 211 vR~a~G~d~~l~vDan~~~~~~~ai~~~-~~-l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i 288 (410)
T 2gl5_A 211 MREAMGDDADIIVEIHSLLGTNSAIQFA-KA-IEKYRIFLYEEPIHPLNSDNMQKVSRSTTIPIATGERSYTRWGYRELL 288 (410)
T ss_dssp HHHHHCSSSEEEEECTTCSCHHHHHHHH-HH-HGGGCEEEEECSSCSSCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHH
T ss_pred HHHhcCCCCEEEEECCCCCCHHHHHHHH-HH-HHhcCCCeEECCCChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHH
Confidence 3444565544444 2232 344332 33 4444556777777655555565555566777665443 3678888888
Q ss_pred cCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecC
Q 013019 293 NNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (451)
Q Consensus 293 ~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~t 334 (451)
+.....+|.+. -+-.|-+....+|+++|+++|+.+++=..
T Consensus 289 ~~~~~d~v~ik--~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 289 EKQSIAVAQPD--LCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp HTTCCSEECCC--TTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred HcCCCCEEecC--ccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 76546666653 23578888889999999999999887443
No 414
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=21.53 E-value=1e+02 Score=29.05 Aligned_cols=78 Identities=6% Similarity=0.014 Sum_probs=45.3
Q ss_pred EEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHH-HHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEE
Q 013019 252 IVTTTDCYRKTRIFIETVLPKMGITATVIDPADME-GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (451)
Q Consensus 252 VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d-~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lV 330 (451)
+++....|......+...++..|++|++++..++. ..+ .+.+ ..+|++.....-.....-++.|.+..++-|.+++
T Consensus 8 LiV~g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~~~~~-~L~~--yDvIIl~d~~~~~l~~~~~~~L~~yV~~GGgLi~ 84 (259)
T 3rht_A 8 LYCGDTSLETAAGYLAGLMTSWQWEFDYIPSHVGLDVGE-LLAK--QDLVILSDYPAERMTAQAIDQLVTMVKAGCGLVM 84 (259)
T ss_dssp EEEESSCTTTTHHHHHHHHHHTTCCCEEECTTSCBCSSH-HHHT--CSEEEEESCCGGGBCHHHHHHHHHHHHTTCEEEE
T ss_pred EEECCCCchhHHHHHHHHHHhCCceEEEecccccccChh-HHhc--CCEEEEcCCccccCCHHHHHHHHHHHHhCCeEEE
Confidence 44555555544556667788889999988765431 111 2333 4677775322101112236788888887677777
Q ss_pred Ee
Q 013019 331 ID 332 (451)
Q Consensus 331 VD 332 (451)
+=
T Consensus 85 ~g 86 (259)
T 3rht_A 85 LG 86 (259)
T ss_dssp EC
T ss_pred ec
Confidence 73
No 415
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=21.48 E-value=1.6e+02 Score=28.30 Aligned_cols=9 Identities=11% Similarity=0.132 Sum_probs=4.2
Q ss_pred CeEEEcCCC
Q 013019 250 GHIVTTTDC 258 (451)
Q Consensus 250 D~VIv~~~~ 258 (451)
|-|++..|.
T Consensus 68 D~V~i~tp~ 76 (354)
T 3db2_A 68 EMVIITVPN 76 (354)
T ss_dssp CEEEECSCT
T ss_pred CEEEEeCCh
Confidence 444444443
No 416
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=21.48 E-value=45 Score=34.72 Aligned_cols=28 Identities=14% Similarity=0.150 Sum_probs=25.6
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
..|+..|+++|++.||++|+.||+|-++
T Consensus 74 ~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 101 (543)
T 2zic_A 74 IFGNMADMDNLLTQAKMRGIKIIMDLVV 101 (543)
T ss_dssp GGCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3688889999999999999999999985
No 417
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=21.46 E-value=41 Score=35.78 Aligned_cols=60 Identities=18% Similarity=0.209 Sum_probs=39.2
Q ss_pred hhcCCcEEEEeCCCCHHHHHHhhcC--CCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 270 LPKMGITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 270 l~~~Gi~v~~vd~~D~d~Le~ai~~--~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
++.+|+...++.+.- + .-.. ..+.=.+ .+....|+..|+++|++-||++|+.||+|-++.
T Consensus 248 Lk~LGvt~I~L~Pif-~----s~~~~GYd~~dy~--~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~N 309 (645)
T 4aef_A 248 LVNLGINAIYLTPIF-S----SLTYHGYDIVDYF--HVARRLGGDRAFVDLLSELKRFDIKVILDGVFH 309 (645)
T ss_dssp HHHHTCCEEEECCCE-E----ESSTTCSSEEEEE--EECGGGTCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHcCCCEEEECCCC-C----CCCCCCcCccCCC--ccCcccCCHHHHHHHHHHhhhcCCEEEEEeccc
Confidence 667788777665420 0 0001 1122222 234457888999999999999999999999853
No 418
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=21.45 E-value=1.6e+02 Score=29.07 Aligned_cols=91 Identities=16% Similarity=0.102 Sum_probs=53.7
Q ss_pred hHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCC--CCccccccHHHHHHHHHhc--CCEEEEecCCCC
Q 013019 262 TRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKK--GAIVCIDGTFAT 337 (451)
Q Consensus 262 t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPs--NPtG~v~DL~~IaelA~~~--g~~lVVD~tfa~ 337 (451)
++..++.+.+..++++..-...+.++.+.+.+.. ...|++.+.. +..+...+++.|.++++.. +++||.|.=..+
T Consensus 205 ~w~~i~~lr~~~~~PvivK~v~~~e~A~~a~~~G-aD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~ 283 (352)
T 3sgz_A 205 CWNDLSLLQSITRLPIILKGILTKEDAELAMKHN-VQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRT 283 (352)
T ss_dssp CHHHHHHHHHHCCSCEEEEEECSHHHHHHHHHTT-CSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCS
T ss_pred CHHHHHHHHHhcCCCEEEEecCcHHHHHHHHHcC-CCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCC
Confidence 3444544444445554332235677777766654 7888874321 1122334577787777665 699999986555
Q ss_pred CC-ccccccCCCcEEEE
Q 013019 338 PL-NQKALSLGADLVLH 353 (451)
Q Consensus 338 ~~-~~~pl~~GaDiVv~ 353 (451)
+. ..+.+.+|||.|..
T Consensus 284 g~Dv~kaLalGA~aV~i 300 (352)
T 3sgz_A 284 GTDVLKALALGARCIFL 300 (352)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 42 23556778887763
No 419
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=21.43 E-value=1.4e+02 Score=30.14 Aligned_cols=97 Identities=8% Similarity=0.019 Sum_probs=65.5
Q ss_pred HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcC--CcEEEEeC--CCCHHHHHHhhcCCCeEEEEEeCCCCCccc
Q 013019 236 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM--GITATVID--PADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (451)
Q Consensus 236 aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~--Gi~v~~vd--~~D~d~Le~ai~~~~tklV~lesPsNPtG~ 311 (451)
+|+.. +..+..+-+-..+.+|........+..+.+.. .+++-.-+ ..+..++++.++..-..+|.+. -|-.|.
T Consensus 283 eai~~-~~~l~~~~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik--~~~~GG 359 (444)
T 1w6t_A 283 EQIDY-LEELVNKYPIITIEDGMDENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILIK--VNQIGT 359 (444)
T ss_dssp HHHHH-HHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC--HHHHCS
T ss_pred HHHHH-HHHHHHhCCcEEEECCCChhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEc--ccccCC
Confidence 44433 33444444578889998876666665655555 56665434 2468888888865445666653 234788
Q ss_pred cccHHHHHHHHHhcCCEEEEecCC
Q 013019 312 CVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 312 v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
+....+++++|+++|+.+++-...
T Consensus 360 itea~~ia~lA~~~g~~v~~~h~~ 383 (444)
T 1w6t_A 360 LTETFEAIEMAKEAGYTAVVSHRS 383 (444)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCeEEecCCC
Confidence 889999999999999999884443
No 420
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=21.33 E-value=4.2e+02 Score=23.31 Aligned_cols=51 Identities=14% Similarity=0.216 Sum_probs=31.4
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCC
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDC 258 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~ 258 (451)
..|....+-..+..+.....++-+++|+......+...+.++.+|+..+..
T Consensus 44 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~ 94 (239)
T 2hnk_A 44 ISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVS 94 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESC
T ss_pred cCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECC
Confidence 345555555555666666777878888755555554445546677776643
No 421
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=21.32 E-value=43 Score=38.01 Aligned_cols=30 Identities=27% Similarity=0.358 Sum_probs=25.1
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
..|++...+++++++.||++|+-||.|-++
T Consensus 555 ~~~~~~~~efk~lV~~~H~~GI~VIlDvV~ 584 (1014)
T 2ya1_A 555 KNPEKRIAEFKNLINEIHKRGMGAILDVVY 584 (1014)
T ss_dssp TCTTHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred ccccchHHHHHHHHHHHHHcCCEEEEEEec
Confidence 334445678999999999999999999886
No 422
>1mct_I Trypsin inhibitor A; complex(proteinase/inhibitor); 1.60A {Momordica charantia} SCOP: g.3.2.1 PDB: 1f2s_I
Probab=21.19 E-value=19 Score=22.31 Aligned_cols=15 Identities=33% Similarity=0.654 Sum_probs=12.4
Q ss_pred cccccccccCCCCCccccCCCCC
Q 013019 7 SSQKILSFSSSCSSFECRSDPDF 29 (451)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (451)
.|||++ .+|..|.|-
T Consensus 2 ~CPrIl--------m~Ck~DsDC 16 (28)
T 1mct_I 2 ICPRIW--------MECTRDSDC 16 (28)
T ss_dssp CEECCC--------CBCSSGGGS
T ss_pred CCchhh--------hhccccccc
Confidence 389999 899998874
No 423
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=21.08 E-value=1.4e+02 Score=29.30 Aligned_cols=19 Identities=21% Similarity=0.302 Sum_probs=9.7
Q ss_pred HHHHHHHHHh--cCCEEEEec
Q 013019 315 VKLVSDLCHK--KGAIVCIDG 333 (451)
Q Consensus 315 L~~IaelA~~--~g~~lVVD~ 333 (451)
+.++.++.++ .|-++.+..
T Consensus 162 ~~~~k~~i~~G~iG~i~~~~~ 182 (412)
T 4gqa_A 162 ALLAKQIIARGDIGEPVRFRG 182 (412)
T ss_dssp HHHHHHHHHHTTTCSEEEEEE
T ss_pred HHHHHHHHhcCCcCCeEEEEE
Confidence 4555565554 344554443
No 424
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=21.03 E-value=1.3e+02 Score=28.95 Aligned_cols=20 Identities=15% Similarity=0.245 Sum_probs=10.8
Q ss_pred cHHHHHHHHHh--cCCEEEEec
Q 013019 314 DVKLVSDLCHK--KGAIVCIDG 333 (451)
Q Consensus 314 DL~~IaelA~~--~g~~lVVD~ 333 (451)
.+..+.++.++ .|-+..+..
T Consensus 130 ~~~~~~~~i~~g~iG~i~~~~~ 151 (349)
T 3i23_A 130 DYLAMKQVVEQGFLGEINEVET 151 (349)
T ss_dssp HHHHHHHHHHHTTTCSEEEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEEE
Confidence 35566666654 355555544
No 425
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=21.00 E-value=4.1e+02 Score=25.82 Aligned_cols=115 Identities=11% Similarity=0.018 Sum_probs=69.4
Q ss_pred HHHHhhhCCCcEEEe-CCHH----HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-CCCHHHHHH
Q 013019 217 EKMSALEGAESTVIM-ASGM----SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEA 290 (451)
Q Consensus 217 e~LA~l~gae~~vv~-sSG~----aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd-~~D~d~Le~ 290 (451)
+++.+..|.+-.+.+ .+|. +|+.. +..+ .+-+-..+..|........+..+.+..++.+-..+ ..+.+++++
T Consensus 175 ~avR~~~g~~~~l~vDaN~~~~~~~A~~~-~~~l-~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ 252 (368)
T 3q45_A 175 RMIREAAGDSITLRIDANQGWSVETAIET-LTLL-EPYNIQHCEEPVSRNLYTALPKIRQACRIPIMADESCCNSFDAER 252 (368)
T ss_dssp HHHHHHHCSSSEEEEECTTCBCHHHHHHH-HHHH-GGGCCSCEECCBCGGGGGGHHHHHHTCSSCEEESTTCCSHHHHHH
T ss_pred HHHHHHhCCCCeEEEECCCCCChHHHHHH-HHHH-hhcCCCEEECCCChhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHH
Confidence 445555665544444 2332 33322 2333 33334455666654434344444455677765433 346888888
Q ss_pred hhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 291 ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 291 ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
.++.....+|.+. ++ -.|-+....+|+++|+++|+.+++-..+
T Consensus 253 ~~~~~~~d~v~~k-~~-~~GGit~~~~i~~~A~~~gi~~~~~~~~ 295 (368)
T 3q45_A 253 LIQIQACDSFNLK-LS-KSAGITNALNIIRLAEQAHMPVQVGGFL 295 (368)
T ss_dssp HHHTTCCSEEEEC-TT-TTTSHHHHHHHHHHHHHTTCCEEECCSS
T ss_pred HHHcCCCCeEEec-hh-hcCCHHHHHHHHHHHHHcCCcEEecCcc
Confidence 8876546777764 33 4677888899999999999999886543
No 426
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=20.94 E-value=5e+02 Score=28.41 Aligned_cols=82 Identities=11% Similarity=0.047 Sum_probs=52.4
Q ss_pred CeEEEcC---CCCcchHHHHHHhhhcCCcEEEEeCC-CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhc
Q 013019 250 GHIVTTT---DCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (451)
Q Consensus 250 D~VIv~~---~~Y~~t~~~l~~~l~~~Gi~v~~vd~-~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~ 325 (451)
-+|++.. ..|.--..++...++..|++|..... ..++++.++..+.++.+|.+++-. ++...-++++.+..++.
T Consensus 605 ~kVvlatvg~D~HdiG~~iVa~~l~~~GfeVi~lG~~v~~eeiv~aA~e~~adiVglSsl~--~~~~~~~~~vi~~Lr~~ 682 (762)
T 2xij_A 605 PRLLVAKMGQDGHDRGAKVIATGFADLGFDVDIGPLFQTPREVAQQAVDADVHAVGVSTLA--AGHKTLVPELIKELNSL 682 (762)
T ss_dssp CEEEEECCSSCCCCHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEECS--SCHHHHHHHHHHHHHHT
T ss_pred CEEEEEecCcchhhHHHHHHHHHHHhCCeEEeeCCCCCCHHHHHHHHHHcCCCEEEEeeec--HHHHHHHHHHHHHHHhc
Confidence 3566544 23443445666678888999976543 256776665554458899987554 33444578888888887
Q ss_pred CC---EEEEec
Q 013019 326 GA---IVCIDG 333 (451)
Q Consensus 326 g~---~lVVD~ 333 (451)
|+ +|++=.
T Consensus 683 G~~dv~VivGG 693 (762)
T 2xij_A 683 GRPDILVMCGG 693 (762)
T ss_dssp TCTTSEEEEEE
T ss_pred CCCCCEEEEeC
Confidence 64 666554
No 427
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=20.74 E-value=3.1e+02 Score=23.89 Aligned_cols=44 Identities=18% Similarity=0.255 Sum_probs=26.9
Q ss_pred HHHhhcCCCeEEEEEeCCCCCcccc--------------c-cHHHHHHHHHhcCCEEEE
Q 013019 288 LEAALNNNNVSLFFTESPTNPFLRC--------------V-DVKLVSDLCHKKGAIVCI 331 (451)
Q Consensus 288 Le~ai~~~~tklV~lesPsNPtG~v--------------~-DL~~IaelA~~~g~~lVV 331 (451)
+.+.+...++++|++..|++..-.. . -+..|.++++++|+.+++
T Consensus 111 ~~~~~~~~~~~lliiD~~~~~~~~~~~~~~~~~~r~~~~~~~~~~l~~~~~~~~~tvi~ 169 (243)
T 1n0w_A 111 ASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVI 169 (243)
T ss_dssp HHHHHHHSCEEEEEEETSSGGGC-------CHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHhcCCceEEEEeCchHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 4444443358999999988543211 1 134566778888877665
No 428
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=20.69 E-value=49 Score=35.50 Aligned_cols=30 Identities=20% Similarity=0.103 Sum_probs=26.5
Q ss_pred CCCccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 306 sNPtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
.-..|...|+++|++.||++|+.||+|-++
T Consensus 110 dp~~Gt~~dfk~Lv~~aH~~GikVilD~V~ 139 (683)
T 3bmv_A 110 NPYFGSFTDFQNLINTAHAHNIKVIIDFAP 139 (683)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 334788999999999999999999999885
No 429
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=20.68 E-value=99 Score=29.34 Aligned_cols=96 Identities=14% Similarity=0.101 Sum_probs=55.3
Q ss_pred eEEEcCCCCcchHHHHHHhhhcCCcEEEEeCC-CCHHHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEE
Q 013019 251 HIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV 329 (451)
Q Consensus 251 ~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~-~D~d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~l 329 (451)
.|++....|++....+...-....+++-.=|. .|+-++.++-.-. ..+|++-.- ...-..++++.++|++.|.-+
T Consensus 81 SVLTd~~~F~Gs~~~L~~vr~~v~lPvLrKDFiid~yQI~eAr~~G-ADaILLI~a---~L~~~~l~~l~~~A~~lGl~~ 156 (258)
T 4a29_A 81 SITTEEKYFNGSYETLRKIASSVSIPILMSDFIVKESQIDDAYNLG-ADTVLLIVK---ILTERELESLLEYARSYGMEP 156 (258)
T ss_dssp EEECCSTTTCCCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHHHT-CSEEEEEGG---GSCHHHHHHHHHHHHHTTCCC
T ss_pred EEeCCCCCCCCCHHHHHHHHHhcCCCEeeccccccHHHHHHHHHcC-CCeeehHHh---hcCHHHHHHHHHHHHHHhHHH
Confidence 36777788888888887665556666654453 3666665543221 334443111 122235889999999999777
Q ss_pred EEecCCCCCCccccccCCCcEE
Q 013019 330 CIDGTFATPLNQKALSLGADLV 351 (451)
Q Consensus 330 VVD~tfa~~~~~~pl~~GaDiV 351 (451)
++.- +...-..+.+..|++++
T Consensus 157 LvEV-h~~~El~rAl~~~a~iI 177 (258)
T 4a29_A 157 LILI-NDENDLDIALRIGARFI 177 (258)
T ss_dssp EEEE-SSHHHHHHHHHTTCSEE
T ss_pred HHhc-chHHHHHHHhcCCCcEE
Confidence 7643 22111233445566655
No 430
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=20.63 E-value=4e+02 Score=22.73 Aligned_cols=40 Identities=15% Similarity=0.222 Sum_probs=24.2
Q ss_pred HhhcCCCeEEEEEeCCCCCcccc-------cc----HHHHHHHHHhcCCEEE
Q 013019 290 AALNNNNVSLFFTESPTNPFLRC-------VD----VKLVSDLCHKKGAIVC 330 (451)
Q Consensus 290 ~ai~~~~tklV~lesPsNPtG~v-------~D----L~~IaelA~~~g~~lV 330 (451)
+.+.+ ++++|++..|+...-.. .+ ++.|.++++++|+.++
T Consensus 100 ~l~~~-~~~lliiD~~~~~l~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~vi 150 (220)
T 2cvh_A 100 KTVDS-NFALVVVDSITAHYRAEENRSGLIAELSRQLQVLLWIARKHNIPVI 150 (220)
T ss_dssp HHCCT-TEEEEEEECCCCCTTGGGGSSTTHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHhhc-CCCEEEEcCcHHHhhhcCchHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 34434 48999999998643211 11 3346777888775544
No 431
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=20.62 E-value=1.3e+02 Score=27.56 Aligned_cols=64 Identities=14% Similarity=0.137 Sum_probs=39.2
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCHH----HHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEE-Ee
Q 013019 263 RIFIETVLPKMGITATVIDPADME----GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC-ID 332 (451)
Q Consensus 263 ~~~l~~~l~~~Gi~v~~vd~~D~d----~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lV-VD 332 (451)
...++..+...|+++.+.+..|.+ .++..+.. ++..|++. |.++ .....+.+.+++.|+++| +|
T Consensus 21 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~i~~l~~~-~vdgiii~-~~~~----~~~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 21 WKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAAS-GAKGFVIC-TPDP----KLGSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHT-TCCEEEEE-CSCG----GGHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHHHHc-CCCEEEEe-CCCc----hhhHHHHHHHHHCCCcEEEeC
Confidence 334455667779888777665644 35555555 47888874 3322 134555666777898866 45
No 432
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=20.57 E-value=1.3e+02 Score=23.96 Aligned_cols=53 Identities=17% Similarity=0.187 Sum_probs=35.5
Q ss_pred CHHHHHHhhcCCCeEEEEEeCCCCCcccccc----HHHHHHHHHhcCCE-EEEecCCC
Q 013019 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI-VCIDGTFA 336 (451)
Q Consensus 284 D~d~Le~ai~~~~tklV~lesPsNPtG~v~D----L~~IaelA~~~g~~-lVVD~tfa 336 (451)
+.+.|++.+++.++..|++--|-|..|..-+ .++.++..++.+++ ..+||-+.
T Consensus 39 ~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 39 DVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 4667787777656889999999988887654 34444443333655 56787654
No 433
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=20.56 E-value=4e+02 Score=22.79 Aligned_cols=119 Identities=11% Similarity=0.148 Sum_probs=62.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCc--EEEEeCCCCH
Q 013019 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADM 285 (451)
Q Consensus 208 ~npt~~~Lee~LA~l~gae~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi--~v~~vd~~D~ 285 (451)
..|....+-+.+.........+=+++|+......+...++++.+|+..+..-. .....+..+...|+ .+.++.. |.
T Consensus 40 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~v~~~~~-d~ 117 (210)
T 3c3p_A 40 VDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRD-NVEHARRMLHDNGLIDRVELQVG-DP 117 (210)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHH-HHHHHHHHHHHHSGGGGEEEEES-CH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHCCCCceEEEEEe-cH
Confidence 34555566666666666677777888886655555444444667777664332 23333333333343 2444332 33
Q ss_pred HHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHh---cCCEEEEecCCC
Q 013019 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIVCIDGTFA 336 (451)
Q Consensus 286 d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~---~g~~lVVD~tfa 336 (451)
.++...+. . ..+|++..+ ..+...+.+.+.+ .|..+++|+++.
T Consensus 118 ~~~~~~~~-~-fD~v~~~~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 118 LGIAAGQR-D-IDILFMDCD------VFNGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp HHHHTTCC-S-EEEEEEETT------TSCHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred HHHhccCC-C-CCEEEEcCC------hhhhHHHHHHHHHhcCCCeEEEEECccc
Confidence 33322222 3 678887532 2344444444443 355677787743
No 434
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=20.40 E-value=3.2e+02 Score=24.71 Aligned_cols=100 Identities=16% Similarity=0.197 Sum_probs=47.7
Q ss_pred CeEEEcCC--CCcchHHHHHHhhhcCCcEEEE-eCC-CCHHHHHHhhcCCCeEEEEEeCCCCCc--cccc---cHHHHHH
Q 013019 250 GHIVTTTD--CYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPF--LRCV---DVKLVSD 320 (451)
Q Consensus 250 D~VIv~~~--~Y~~t~~~l~~~l~~~Gi~v~~-vd~-~D~d~Le~ai~~~~tklV~lesPsNPt--G~v~---DL~~Iae 320 (451)
|-|.+... ........++ .++..|..+-. +.+ ...+.++..+.. ...|++- +.||+ |... .++.|.+
T Consensus 87 dgv~vh~e~~~~~~~~~~~~-~i~~~g~~~gv~~~p~t~~e~~~~~~~~--~D~v~~m-sv~pg~ggq~~~~~~~~~i~~ 162 (230)
T 1tqj_A 87 DIISVHVEHNASPHLHRTLC-QIRELGKKAGAVLNPSTPLDFLEYVLPV--CDLILIM-SVNPGFGGQSFIPEVLPKIRA 162 (230)
T ss_dssp SEEEEECSTTTCTTHHHHHH-HHHHTTCEEEEEECTTCCGGGGTTTGGG--CSEEEEE-SSCC----CCCCGGGHHHHHH
T ss_pred CEEEECcccccchhHHHHHH-HHHHcCCcEEEEEeCCCcHHHHHHHHhc--CCEEEEE-EeccccCCccCcHHHHHHHHH
Confidence 55655543 2222233332 33445655433 232 233444444432 5666653 34564 3221 2444544
Q ss_pred HHHhc-----CCEEEEecCCCCCCccccccCCCcEEEE
Q 013019 321 LCHKK-----GAIVCIDGTFATPLNQKALSLGADLVLH 353 (451)
Q Consensus 321 lA~~~-----g~~lVVD~tfa~~~~~~pl~~GaDiVv~ 353 (451)
+.+.. ++++.+|.=....-.....+.|+|.++-
T Consensus 163 lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aGad~vvv 200 (230)
T 1tqj_A 163 LRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVA 200 (230)
T ss_dssp HHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEE
T ss_pred HHHHHHhcCCCCcEEEECCcCHHHHHHHHHcCCCEEEE
Confidence 44332 7999999754432223334568997774
No 435
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=20.32 E-value=58 Score=34.71 Aligned_cols=27 Identities=22% Similarity=0.223 Sum_probs=24.2
Q ss_pred ccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 309 FLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 309 tG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
.|...|++++++-||++|+.||+|-++
T Consensus 159 ~Gt~~d~~~Lv~~ah~~GI~VilD~V~ 185 (628)
T 1g5a_A 159 LGTIGDLREVIAALHEAGISAVVDFIF 185 (628)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 566778999999999999999999985
No 436
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=20.29 E-value=3.1e+02 Score=27.57 Aligned_cols=97 Identities=18% Similarity=0.202 Sum_probs=54.8
Q ss_pred cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCC-cEEEEeCCCCHHHHHHhhcCCCeEEEEEeCC
Q 013019 227 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG-ITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (451)
Q Consensus 227 ~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~G-i~v~~vd~~D~d~Le~ai~~~~tklV~lesP 305 (451)
..+++++|..+-. +...+.+.|.+|++.+. +..-.+.....++ +.....|..|.+++++++.+ ..+|+.+.|
T Consensus 5 ~VlViGaG~iG~~-ia~~L~~~G~~V~v~~R----~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~--~DvVIn~a~ 77 (450)
T 1ff9_A 5 SVLMLGSGFVTRP-TLDVLTDSGIKVTVACR----TLESAKKLSAGVQHSTPISLDVNDDAALDAEVAK--HDLVISLIP 77 (450)
T ss_dssp EEEEECCSTTHHH-HHHHHHTTTCEEEEEES----SHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTT--SSEEEECCC
T ss_pred EEEEECCCHHHHH-HHHHHHhCcCEEEEEEC----CHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcC--CcEEEECCc
Confidence 4566666653332 23345567777766442 2222333333333 44445677788888888863 678888777
Q ss_pred CCCcc----------c-cc-------cHHHHHHHHHhcCCEEE
Q 013019 306 TNPFL----------R-CV-------DVKLVSDLCHKKGAIVC 330 (451)
Q Consensus 306 sNPtG----------~-v~-------DL~~IaelA~~~g~~lV 330 (451)
..... . +. ...++.+.|++.|+.++
T Consensus 78 ~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~i 120 (450)
T 1ff9_A 78 YTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVM 120 (450)
T ss_dssp --CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEEE
T ss_pred cccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeEE
Confidence 64321 1 11 24567788888888754
No 437
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=20.27 E-value=4.4e+02 Score=25.58 Aligned_cols=113 Identities=6% Similarity=0.007 Sum_probs=69.6
Q ss_pred HHHHhhhCCCcEEEe-CCHH----HHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeC-CCCHHHHHH
Q 013019 217 EKMSALEGAESTVIM-ASGM----SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEA 290 (451)
Q Consensus 217 e~LA~l~gae~~vv~-sSG~----aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd-~~D~d~Le~ 290 (451)
+.+.+..|.+-.+.+ .+|. +|+.. +. .+.+-+-..+..|........+..+.+..++.+-..+ ..+.+++++
T Consensus 188 ~avR~~~g~~~~l~vDan~~~~~~~a~~~-~~-~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ 265 (372)
T 3tj4_A 188 TAVRERVDSAVRIAIDGNGKWDLPTCQRF-CA-AAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRS 265 (372)
T ss_dssp HHHHHHSCTTCEEEEECTTCCCHHHHHHH-HH-HTTTSCEEEEESCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHH
T ss_pred HHHHHHcCCCCcEEeeCCCCCCHHHHHHH-HH-HHhhcCCCEEECCCCchhHHHHHHHHhhcCCCEEeCCCccCHHHHHH
Confidence 445555665545544 2332 23222 22 3455455677888766555555555556677765433 346888888
Q ss_pred hhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEec
Q 013019 291 ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDG 333 (451)
Q Consensus 291 ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD~ 333 (451)
.++.....+|.+. + +-.|-+....+|+++|+++|+.+.+=.
T Consensus 266 ~i~~~~~d~v~~k-~-~~~GGit~~~~ia~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 266 FIDAGAVAYVQPD-V-TRLGGITEYIQVADLALAHRLPVVPHA 306 (372)
T ss_dssp HHHTTCCSEECCC-T-TTTTHHHHHHHHHHHHHHTTCCBCCCC
T ss_pred HHHcCCCCEEEeC-c-cccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 8876545666543 2 346778889999999999999876543
No 438
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=20.25 E-value=51 Score=35.52 Aligned_cols=28 Identities=14% Similarity=0.150 Sum_probs=25.3
Q ss_pred CccccccHHHHHHHHHhcCCEEEEecCC
Q 013019 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (451)
Q Consensus 308 PtG~v~DL~~IaelA~~~g~~lVVD~tf 335 (451)
-.|...|+++|++-||++|+.||+|-++
T Consensus 307 ~~Gt~~df~~Lv~~aH~~GikVilD~V~ 334 (696)
T 4aee_A 307 YLGTMEDFEKLVQVLHSRKIKIVLDITM 334 (696)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 3688889999999999999999999985
No 439
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=20.22 E-value=1.7e+02 Score=27.78 Aligned_cols=9 Identities=22% Similarity=0.224 Sum_probs=4.1
Q ss_pred CeEEEcCCC
Q 013019 250 GHIVTTTDC 258 (451)
Q Consensus 250 D~VIv~~~~ 258 (451)
|-|++..|.
T Consensus 65 D~V~i~tp~ 73 (331)
T 4hkt_A 65 DAVVICTPT 73 (331)
T ss_dssp CEEEECSCG
T ss_pred CEEEEeCCc
Confidence 445544433
No 440
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=20.11 E-value=1.7e+02 Score=28.23 Aligned_cols=43 Identities=16% Similarity=0.257 Sum_probs=24.8
Q ss_pred HHHHHhhcCCCeEEEEEeCCCCCccccccHHHHHHHHHhcCCEEEEe
Q 013019 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCID 332 (451)
Q Consensus 286 d~Le~ai~~~~tklV~lesPsNPtG~v~DL~~IaelA~~~g~~lVVD 332 (451)
+.+.++++.. +-|++|-|- +....+.++|.++|+++|+.+.+-
T Consensus 86 ~~~~~al~aG--k~V~~EKP~--a~~~~e~~~l~~~a~~~g~~~~~~ 128 (362)
T 1ydw_A 86 EWAIKAAEKG--KHILLEKPV--AMNVTEFDKIVDACEANGVQIMDG 128 (362)
T ss_dssp HHHHHHHTTT--CEEEECSSC--SSSHHHHHHHHHHHHTTTCCEEEC
T ss_pred HHHHHHHHCC--CeEEEecCC--cCCHHHHHHHHHHHHHcCCEEEEE
Confidence 3344445432 456666664 234446677777777777766654
No 441
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=20.02 E-value=1.3e+02 Score=29.20 Aligned_cols=95 Identities=13% Similarity=0.107 Sum_probs=51.7
Q ss_pred cEEEeCCHHHHHHHHHHHHccCCCeEEEcCCCCcchHHHHHHhhhcCCcEEEEeCCCCHHHHHHhhcCCCeEEEEEeCCC
Q 013019 227 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (451)
Q Consensus 227 ~~vv~sSG~aAi~~al~all~~GD~VIv~~~~Y~~t~~~l~~~l~~~Gi~v~~vd~~D~d~Le~ai~~~~tklV~lesPs 306 (451)
..-+++.|..+....+..+..+|-+|+..- .....-.+...+.+|....+ .|.+++ +++.++.+|++++|+
T Consensus 28 rvgiiG~G~~~~~~~~~~~~~~~~~lvav~---d~~~~~a~~~a~~~~~~~~~---~~~~~l---l~~~~vD~V~I~tp~ 98 (361)
T 3u3x_A 28 RFAAVGLNHNHIYGQVNCLLRAGARLAGFH---EKDDALAAEFSAVYADARRI---ATAEEI---LEDENIGLIVSAAVS 98 (361)
T ss_dssp EEEEECCCSTTHHHHHHHHHHTTCEEEEEE---CSCHHHHHHHHHHSSSCCEE---SCHHHH---HTCTTCCEEEECCCH
T ss_pred EEEEECcCHHHHHHHHHHhhcCCcEEEEEE---cCCHHHHHHHHHHcCCCccc---CCHHHH---hcCCCCCEEEEeCCh
Confidence 455566665333333334445665654322 12233334455566632222 345554 444348899998887
Q ss_pred CCccccccHHHHHHHHHhcCCEEEEecCCC
Q 013019 307 NPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (451)
Q Consensus 307 NPtG~v~DL~~IaelA~~~g~~lVVD~tfa 336 (451)
+. -.+++..|-++|..|+++--.+
T Consensus 99 ~~------H~~~~~~al~aGkhVl~EKPla 122 (361)
T 3u3x_A 99 SE------RAELAIRAMQHGKDVLVDKPGM 122 (361)
T ss_dssp HH------HHHHHHHHHHTTCEEEEESCSC
T ss_pred HH------HHHHHHHHHHCCCeEEEeCCCC
Confidence 31 2455666777899999887654
Done!