Query 013022
Match_columns 451
No_of_seqs 193 out of 724
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 20:45:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013022.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013022hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ii2_A Phosphoenolpyruvate car 100.0 1.8E-95 6E-100 768.0 29.4 300 142-441 2-320 (524)
2 2olr_A Phosphoenolpyruvate car 100.0 5.7E-94 1.9E-98 756.7 29.9 304 131-441 9-347 (540)
3 1ytm_A Phosphoenolpyruvate car 100.0 4.6E-94 1.6E-98 758.0 28.0 305 131-439 4-339 (532)
4 1j3b_A ATP-dependent phosphoen 100.0 8E-87 2.7E-91 702.6 29.9 306 133-440 3-332 (529)
5 2faf_A Phosphoenolpyruvate car 99.9 1.7E-21 5.7E-26 206.0 23.1 290 140-443 24-407 (608)
6 2zci_A Phosphoenolpyruvate car 99.9 3.2E-21 1.1E-25 204.1 22.6 297 140-443 32-405 (610)
7 3moe_A Phosphoenolpyruvate car 99.8 4.9E-18 1.7E-22 179.9 22.5 289 140-441 41-421 (624)
8 3tqf_A HPR(Ser) kinase; transf 97.9 4.1E-06 1.4E-10 78.2 2.3 46 321-367 4-52 (181)
9 1knx_A Probable HPR(Ser) kinas 97.7 1.1E-05 3.9E-10 80.5 2.5 47 320-367 134-183 (312)
10 1ko7_A HPR kinase/phosphatase; 97.7 2E-05 6.8E-10 78.8 3.7 49 318-367 129-180 (314)
11 2qmh_A HPR kinase/phosphorylas 97.4 3.9E-05 1.3E-09 72.8 2.2 49 318-367 19-70 (205)
12 3tr0_A Guanylate kinase, GMP k 95.4 0.0051 1.7E-07 54.4 1.8 20 333-352 6-25 (205)
13 4gp7_A Metallophosphoesterase; 95.3 0.0043 1.5E-07 54.8 1.1 21 332-352 7-27 (171)
14 1zp6_A Hypothetical protein AT 95.3 0.005 1.7E-07 54.0 1.4 21 332-352 7-27 (191)
15 1kgd_A CASK, peripheral plasma 95.2 0.0062 2.1E-07 54.0 1.7 20 333-352 4-23 (180)
16 3uie_A Adenylyl-sulfate kinase 95.2 0.006 2E-07 54.8 1.6 22 331-352 22-43 (200)
17 1znw_A Guanylate kinase, GMP k 95.1 0.0067 2.3E-07 54.8 1.9 21 332-352 18-38 (207)
18 1qhx_A CPT, protein (chloramph 95.1 0.0062 2.1E-07 52.8 1.5 19 334-352 3-21 (178)
19 2j41_A Guanylate kinase; GMP, 94.9 0.0084 2.9E-07 53.0 1.8 20 333-352 5-24 (207)
20 3tau_A Guanylate kinase, GMP k 94.8 0.0088 3E-07 54.3 1.8 21 332-352 6-26 (208)
21 3a00_A Guanylate kinase, GMP k 94.8 0.0078 2.7E-07 53.5 1.3 19 334-352 1-19 (186)
22 1kag_A SKI, shikimate kinase I 94.8 0.0074 2.5E-07 52.0 1.1 19 334-352 4-22 (173)
23 3c8u_A Fructokinase; YP_612366 94.7 0.009 3.1E-07 54.1 1.5 21 332-352 20-40 (208)
24 1s96_A Guanylate kinase, GMP k 94.7 0.01 3.5E-07 55.4 1.8 21 332-352 14-34 (219)
25 1lvg_A Guanylate kinase, GMP k 94.7 0.0084 2.9E-07 54.3 1.1 20 333-352 3-22 (198)
26 1z6g_A Guanylate kinase; struc 94.6 0.0094 3.2E-07 54.9 1.4 21 332-352 21-41 (218)
27 4eun_A Thermoresistant glucoki 94.5 0.012 4E-07 52.8 1.7 21 332-352 27-47 (200)
28 3lnc_A Guanylate kinase, GMP k 94.4 0.012 3.9E-07 54.0 1.5 21 332-352 25-45 (231)
29 1knq_A Gluconate kinase; ALFA/ 94.4 0.011 3.8E-07 51.3 1.3 20 333-352 7-26 (175)
30 2qor_A Guanylate kinase; phosp 94.4 0.01 3.5E-07 53.4 1.1 20 333-352 11-30 (204)
31 3asz_A Uridine kinase; cytidin 94.3 0.012 4.3E-07 52.5 1.4 21 332-352 4-24 (211)
32 3tif_A Uncharacterized ABC tra 94.3 0.015 5.1E-07 54.7 1.9 21 332-352 29-49 (235)
33 3ec2_A DNA replication protein 94.3 0.011 3.9E-07 51.7 1.0 19 334-352 38-56 (180)
34 1htw_A HI0065; nucleotide-bind 94.1 0.015 5.1E-07 51.8 1.6 21 332-352 31-51 (158)
35 2pcj_A ABC transporter, lipopr 94.1 0.015 5.1E-07 54.2 1.6 21 332-352 28-48 (224)
36 2bdt_A BH3686; alpha-beta prot 94.1 0.011 3.8E-07 52.1 0.6 19 334-352 2-20 (189)
37 3vaa_A Shikimate kinase, SK; s 94.1 0.016 5.4E-07 51.9 1.7 21 332-352 23-43 (199)
38 3kb2_A SPBC2 prophage-derived 94.1 0.015 5.2E-07 49.5 1.4 17 336-352 3-19 (173)
39 2ehv_A Hypothetical protein PH 94.1 0.015 5.3E-07 52.5 1.5 21 332-352 28-48 (251)
40 3lw7_A Adenylate kinase relate 94.0 0.015 5E-07 49.1 1.2 17 336-352 3-19 (179)
41 1kht_A Adenylate kinase; phosp 93.9 0.017 5.9E-07 50.1 1.5 19 334-352 3-21 (192)
42 4a74_A DNA repair and recombin 93.9 0.016 5.3E-07 51.8 1.2 21 332-352 23-43 (231)
43 1b0u_A Histidine permease; ABC 93.9 0.019 6.6E-07 54.8 1.9 21 332-352 30-50 (262)
44 2pez_A Bifunctional 3'-phospho 93.9 0.016 5.6E-07 50.6 1.3 21 332-352 3-23 (179)
45 2rhm_A Putative kinase; P-loop 93.8 0.019 6.5E-07 50.1 1.6 19 334-352 5-23 (193)
46 3trf_A Shikimate kinase, SK; a 93.7 0.02 6.8E-07 50.0 1.5 19 334-352 5-23 (185)
47 1ly1_A Polynucleotide kinase; 93.7 0.018 6.3E-07 49.4 1.3 17 336-352 4-20 (181)
48 3ney_A 55 kDa erythrocyte memb 93.7 0.023 7.8E-07 52.9 1.9 21 332-352 17-37 (197)
49 2cbz_A Multidrug resistance-as 93.6 0.023 7.9E-07 53.4 1.9 21 332-352 29-49 (237)
50 2qt1_A Nicotinamide riboside k 93.6 0.024 8E-07 50.8 1.8 21 332-352 19-39 (207)
51 3iij_A Coilin-interacting nucl 93.6 0.021 7.2E-07 49.9 1.4 20 333-352 10-29 (180)
52 3b85_A Phosphate starvation-in 93.4 0.027 9.2E-07 52.2 2.0 21 332-352 20-40 (208)
53 1g6h_A High-affinity branched- 93.4 0.023 7.9E-07 54.0 1.5 21 332-352 31-51 (257)
54 2olj_A Amino acid ABC transpor 93.4 0.026 8.9E-07 54.3 1.9 21 332-352 48-68 (263)
55 2pze_A Cystic fibrosis transme 93.4 0.024 8.3E-07 52.9 1.5 21 332-352 32-52 (229)
56 2kjq_A DNAA-related protein; s 93.4 0.029 9.8E-07 49.0 1.9 20 333-352 35-54 (149)
57 2ff7_A Alpha-hemolysin translo 93.4 0.024 8.3E-07 53.7 1.5 21 332-352 33-53 (247)
58 3fvq_A Fe(3+) IONS import ATP- 93.4 0.027 9.4E-07 57.0 2.0 21 332-352 28-48 (359)
59 3t61_A Gluconokinase; PSI-biol 93.3 0.02 7E-07 51.0 1.0 19 334-352 18-36 (202)
60 2d2e_A SUFC protein; ABC-ATPas 93.3 0.025 8.4E-07 53.6 1.5 21 332-352 27-47 (250)
61 1ji0_A ABC transporter; ATP bi 93.3 0.025 8.5E-07 53.2 1.5 21 332-352 30-50 (240)
62 1nks_A Adenylate kinase; therm 93.3 0.022 7.6E-07 49.3 1.1 17 336-352 3-19 (194)
63 4g1u_C Hemin import ATP-bindin 93.3 0.025 8.5E-07 54.4 1.5 21 332-352 35-55 (266)
64 3gfo_A Cobalt import ATP-bindi 93.3 0.026 8.8E-07 54.7 1.6 21 332-352 32-52 (275)
65 1cke_A CK, MSSA, protein (cyti 93.3 0.026 8.8E-07 50.8 1.5 19 334-352 5-23 (227)
66 1mv5_A LMRA, multidrug resista 93.2 0.026 8.8E-07 53.1 1.5 21 332-352 26-46 (243)
67 2ixe_A Antigen peptide transpo 93.2 0.03 1E-06 53.9 1.9 21 332-352 43-63 (271)
68 1vpl_A ABC transporter, ATP-bi 93.2 0.03 1E-06 53.6 1.9 21 332-352 39-59 (256)
69 2wwf_A Thymidilate kinase, put 93.1 0.03 1E-06 49.6 1.8 20 333-352 9-28 (212)
70 2cdn_A Adenylate kinase; phosp 93.1 0.032 1.1E-06 49.7 1.9 30 323-352 8-38 (201)
71 2yz2_A Putative ABC transporte 93.1 0.031 1.1E-06 53.4 1.9 21 332-352 31-51 (266)
72 2ghi_A Transport protein; mult 93.1 0.031 1.1E-06 53.3 1.9 21 332-352 44-64 (260)
73 2zu0_C Probable ATP-dependent 93.1 0.032 1.1E-06 53.5 1.9 21 332-352 44-64 (267)
74 1sgw_A Putative ABC transporte 93.0 0.025 8.6E-07 52.8 1.1 21 332-352 33-53 (214)
75 2yyz_A Sugar ABC transporter, 92.9 0.034 1.2E-06 56.2 1.9 21 332-352 27-47 (359)
76 3rlf_A Maltose/maltodextrin im 92.9 0.034 1.2E-06 56.8 1.9 21 332-352 27-47 (381)
77 2ihy_A ABC transporter, ATP-bi 92.9 0.031 1.1E-06 54.1 1.5 21 332-352 45-65 (279)
78 2bbw_A Adenylate kinase 4, AK4 92.9 0.034 1.2E-06 51.4 1.7 20 333-352 26-45 (246)
79 1gvn_B Zeta; postsegregational 92.9 0.031 1.1E-06 54.0 1.5 20 333-352 32-51 (287)
80 2it1_A 362AA long hypothetical 92.8 0.035 1.2E-06 56.1 1.9 21 332-352 27-47 (362)
81 1nn5_A Similar to deoxythymidy 92.8 0.038 1.3E-06 49.0 1.9 20 333-352 8-27 (215)
82 1rj9_A FTSY, signal recognitio 92.8 0.032 1.1E-06 54.7 1.6 20 333-352 101-120 (304)
83 2nq2_C Hypothetical ABC transp 92.8 0.033 1.1E-06 53.0 1.6 21 332-352 29-49 (253)
84 1v43_A Sugar-binding transport 92.8 0.036 1.2E-06 56.2 1.9 21 332-352 35-55 (372)
85 2jeo_A Uridine-cytidine kinase 92.7 0.032 1.1E-06 51.8 1.4 21 332-352 23-43 (245)
86 2plr_A DTMP kinase, probable t 92.7 0.031 1E-06 49.3 1.2 19 334-352 4-22 (213)
87 3cm0_A Adenylate kinase; ATP-b 92.7 0.026 8.8E-07 49.2 0.6 19 334-352 4-22 (186)
88 2yvu_A Probable adenylyl-sulfa 92.7 0.035 1.2E-06 48.8 1.4 20 333-352 12-31 (186)
89 2w0m_A SSO2452; RECA, SSPF, un 92.7 0.036 1.2E-06 49.2 1.5 21 332-352 21-41 (235)
90 1z47_A CYSA, putative ABC-tran 92.6 0.035 1.2E-06 56.1 1.5 21 332-352 39-59 (355)
91 3aez_A Pantothenate kinase; tr 92.6 0.033 1.1E-06 54.7 1.4 22 331-352 87-108 (312)
92 2qi9_C Vitamin B12 import ATP- 92.6 0.036 1.2E-06 52.8 1.5 21 332-352 24-44 (249)
93 1g29_1 MALK, maltose transport 92.6 0.035 1.2E-06 56.2 1.5 21 332-352 27-47 (372)
94 2vp4_A Deoxynucleoside kinase; 92.6 0.04 1.4E-06 50.7 1.8 22 331-352 17-38 (230)
95 2cvh_A DNA repair and recombin 92.6 0.041 1.4E-06 48.8 1.8 21 332-352 18-38 (220)
96 1rz3_A Hypothetical protein rb 92.5 0.037 1.3E-06 49.8 1.4 21 332-352 20-40 (201)
97 2vli_A Antibiotic resistance p 92.5 0.038 1.3E-06 47.9 1.4 19 334-352 5-23 (183)
98 2i3b_A HCR-ntpase, human cance 92.4 0.035 1.2E-06 50.7 1.2 19 334-352 1-19 (189)
99 2eyu_A Twitching motility prot 92.4 0.038 1.3E-06 52.8 1.5 21 332-352 23-43 (261)
100 2c95_A Adenylate kinase 1; tra 92.3 0.047 1.6E-06 47.7 1.8 20 333-352 8-27 (196)
101 2v54_A DTMP kinase, thymidylat 92.3 0.046 1.6E-06 48.1 1.8 20 333-352 3-22 (204)
102 2v9p_A Replication protein E1; 92.3 0.048 1.6E-06 54.0 2.0 21 332-352 124-144 (305)
103 2bbs_A Cystic fibrosis transme 92.3 0.048 1.6E-06 53.2 2.0 21 332-352 62-82 (290)
104 2bwj_A Adenylate kinase 5; pho 92.3 0.021 7.3E-07 50.0 -0.5 19 334-352 12-30 (199)
105 1n0w_A DNA repair protein RAD5 92.2 0.043 1.5E-06 49.4 1.5 21 332-352 22-42 (243)
106 2pjz_A Hypothetical protein ST 92.2 0.046 1.6E-06 52.5 1.8 19 334-352 30-48 (263)
107 3d31_A Sulfate/molybdate ABC t 92.2 0.032 1.1E-06 56.0 0.7 21 332-352 24-44 (348)
108 4e22_A Cytidylate kinase; P-lo 92.2 0.047 1.6E-06 51.3 1.7 21 332-352 25-45 (252)
109 2jaq_A Deoxyguanosine kinase; 92.1 0.039 1.3E-06 48.3 1.0 17 336-352 2-18 (205)
110 1jbk_A CLPB protein; beta barr 92.1 0.051 1.7E-06 45.9 1.7 19 334-352 43-61 (195)
111 1y63_A LMAJ004144AAA protein; 92.0 0.051 1.7E-06 48.1 1.7 20 333-352 9-28 (184)
112 3tui_C Methionine import ATP-b 92.0 0.052 1.8E-06 55.2 1.9 21 332-352 52-72 (366)
113 1m7g_A Adenylylsulfate kinase; 92.0 0.047 1.6E-06 49.3 1.4 21 332-352 23-43 (211)
114 2ze6_A Isopentenyl transferase 92.0 0.044 1.5E-06 51.7 1.3 29 336-364 3-36 (253)
115 3bos_A Putative DNA replicatio 92.0 0.052 1.8E-06 48.2 1.7 19 334-352 52-70 (242)
116 2p5t_B PEZT; postsegregational 91.9 0.039 1.3E-06 51.7 0.9 20 333-352 31-50 (253)
117 1oxx_K GLCV, glucose, ABC tran 91.9 0.03 1E-06 56.2 0.1 21 332-352 29-49 (353)
118 1ye8_A Protein THEP1, hypothet 91.9 0.045 1.5E-06 49.3 1.2 17 336-352 2-18 (178)
119 3b9q_A Chloroplast SRP recepto 91.9 0.044 1.5E-06 53.7 1.2 47 303-352 71-118 (302)
120 1gtv_A TMK, thymidylate kinase 91.9 0.027 9.2E-07 50.1 -0.3 17 336-352 2-18 (214)
121 1tev_A UMP-CMP kinase; ploop, 91.9 0.045 1.5E-06 47.4 1.2 19 334-352 3-21 (196)
122 3fb4_A Adenylate kinase; psych 91.6 0.047 1.6E-06 48.9 1.0 17 336-352 2-18 (216)
123 1via_A Shikimate kinase; struc 91.6 0.048 1.6E-06 47.5 1.0 17 336-352 6-22 (175)
124 2p65_A Hypothetical protein PF 91.6 0.049 1.7E-06 46.2 1.1 19 334-352 43-61 (187)
125 1sq5_A Pantothenate kinase; P- 91.6 0.056 1.9E-06 52.4 1.5 21 332-352 78-98 (308)
126 3gd7_A Fusion complex of cysti 91.6 0.064 2.2E-06 54.7 2.0 21 332-352 45-65 (390)
127 2z0h_A DTMP kinase, thymidylat 91.5 0.05 1.7E-06 47.5 1.0 17 336-352 2-18 (197)
128 2onk_A Molybdate/tungstate ABC 91.4 0.064 2.2E-06 50.7 1.8 18 335-352 25-42 (240)
129 2pbr_A DTMP kinase, thymidylat 91.4 0.055 1.9E-06 46.9 1.2 17 336-352 2-18 (195)
130 1jjv_A Dephospho-COA kinase; P 91.4 0.055 1.9E-06 48.2 1.2 17 336-352 4-20 (206)
131 3dl0_A Adenylate kinase; phosp 91.4 0.052 1.8E-06 48.7 1.0 17 336-352 2-18 (216)
132 1ex7_A Guanylate kinase; subst 91.4 0.053 1.8E-06 49.8 1.1 18 335-352 2-19 (186)
133 1pui_A ENGB, probable GTP-bind 91.4 0.065 2.2E-06 47.2 1.7 21 332-352 24-44 (210)
134 2iyv_A Shikimate kinase, SK; t 91.4 0.051 1.8E-06 47.4 1.0 17 336-352 4-20 (184)
135 3nh6_A ATP-binding cassette SU 91.4 0.046 1.6E-06 53.9 0.7 22 331-352 77-98 (306)
136 1ixz_A ATP-dependent metallopr 91.4 0.052 1.8E-06 50.1 1.0 16 337-352 52-67 (254)
137 1e6c_A Shikimate kinase; phosp 91.3 0.054 1.8E-06 46.4 1.0 18 335-352 3-20 (173)
138 3e70_C DPA, signal recognition 91.2 0.057 1.9E-06 53.6 1.2 21 332-352 127-147 (328)
139 1lv7_A FTSH; alpha/beta domain 91.0 0.058 2E-06 49.8 1.0 18 335-352 46-63 (257)
140 2w58_A DNAI, primosome compone 91.0 0.071 2.4E-06 47.2 1.5 18 335-352 55-72 (202)
141 2pt5_A Shikimate kinase, SK; a 91.0 0.065 2.2E-06 45.8 1.2 17 336-352 2-18 (168)
142 1nlf_A Regulatory protein REPA 90.9 0.073 2.5E-06 50.2 1.6 21 332-352 28-48 (279)
143 2if2_A Dephospho-COA kinase; a 90.9 0.072 2.5E-06 47.2 1.5 17 336-352 3-19 (204)
144 1aky_A Adenylate kinase; ATP:A 90.9 0.078 2.7E-06 47.9 1.7 20 333-352 3-22 (220)
145 3b9p_A CG5977-PA, isoform A; A 90.9 0.073 2.5E-06 50.0 1.5 20 333-352 53-72 (297)
146 1ukz_A Uridylate kinase; trans 90.8 0.073 2.5E-06 47.2 1.4 19 334-352 15-33 (203)
147 3cf0_A Transitional endoplasmi 90.8 0.076 2.6E-06 50.9 1.6 20 333-352 48-67 (301)
148 1oix_A RAS-related protein RAB 90.8 0.093 3.2E-06 46.2 2.1 17 336-352 31-47 (191)
149 3nwj_A ATSK2; P loop, shikimat 90.8 0.064 2.2E-06 51.3 1.1 19 334-352 48-66 (250)
150 2lkc_A Translation initiation 90.7 0.1 3.5E-06 44.1 2.2 24 329-352 3-26 (178)
151 3syl_A Protein CBBX; photosynt 90.7 0.099 3.4E-06 49.2 2.2 21 332-352 65-85 (309)
152 2qz4_A Paraplegin; AAA+, SPG7, 90.7 0.086 2.9E-06 48.1 1.7 44 303-352 13-57 (262)
153 2dr3_A UPF0273 protein PH0284; 90.6 0.082 2.8E-06 47.6 1.6 21 332-352 21-41 (247)
154 1qf9_A UMP/CMP kinase, protein 90.6 0.077 2.6E-06 45.8 1.4 18 335-352 7-24 (194)
155 1zak_A Adenylate kinase; ATP:A 90.6 0.079 2.7E-06 47.9 1.4 18 335-352 6-23 (222)
156 1zd8_A GTP:AMP phosphotransfer 90.6 0.085 2.9E-06 48.0 1.6 19 334-352 7-25 (227)
157 1uf9_A TT1252 protein; P-loop, 90.5 0.083 2.8E-06 46.3 1.5 19 334-352 8-26 (203)
158 3h4m_A Proteasome-activating n 90.5 0.09 3.1E-06 49.0 1.8 19 334-352 51-69 (285)
159 2og2_A Putative signal recogni 90.4 0.073 2.5E-06 53.7 1.2 46 303-352 128-175 (359)
160 2gj8_A MNME, tRNA modification 90.4 0.085 2.9E-06 45.7 1.4 21 332-352 2-22 (172)
161 1cr0_A DNA primase/helicase; R 90.3 0.097 3.3E-06 49.6 1.9 21 332-352 33-53 (296)
162 2dpy_A FLII, flagellum-specifi 90.3 0.096 3.3E-06 54.0 1.9 20 333-352 156-175 (438)
163 3kta_A Chromosome segregation 90.3 0.098 3.4E-06 45.5 1.7 16 336-351 28-43 (182)
164 1iy2_A ATP-dependent metallopr 90.1 0.079 2.7E-06 49.8 1.0 16 337-352 76-91 (278)
165 2obl_A ESCN; ATPase, hydrolase 90.1 0.099 3.4E-06 52.2 1.8 20 333-352 70-89 (347)
166 2x8a_A Nuclear valosin-contain 90.0 0.079 2.7E-06 50.7 1.0 16 337-352 47-62 (274)
167 1in4_A RUVB, holliday junction 90.0 0.079 2.7E-06 51.6 1.0 18 335-352 52-69 (334)
168 1vht_A Dephospho-COA kinase; s 90.0 0.094 3.2E-06 47.2 1.4 19 334-352 4-22 (218)
169 3a4m_A L-seryl-tRNA(SEC) kinas 89.9 0.091 3.1E-06 49.4 1.3 19 334-352 4-22 (260)
170 3sop_A Neuronal-specific septi 89.9 0.1 3.4E-06 50.1 1.6 17 336-352 4-20 (270)
171 4eaq_A DTMP kinase, thymidylat 89.8 0.098 3.3E-06 48.7 1.4 20 333-352 25-44 (229)
172 1ltq_A Polynucleotide kinase; 89.8 0.094 3.2E-06 49.5 1.3 17 336-352 4-20 (301)
173 1odf_A YGR205W, hypothetical 3 89.7 0.099 3.4E-06 50.8 1.4 20 333-352 30-49 (290)
174 2gza_A Type IV secretion syste 89.7 0.098 3.3E-06 52.1 1.4 21 332-352 173-193 (361)
175 3uk6_A RUVB-like 2; hexameric 89.7 0.11 3.7E-06 50.2 1.6 19 334-352 70-88 (368)
176 2px0_A Flagellar biosynthesis 89.6 0.11 3.8E-06 50.5 1.7 21 332-352 103-123 (296)
177 1u0l_A Probable GTPase ENGC; p 89.6 0.11 3.8E-06 50.2 1.7 30 323-352 149-187 (301)
178 3n70_A Transport activator; si 89.6 0.11 3.6E-06 44.4 1.4 19 334-352 24-42 (145)
179 3tlx_A Adenylate kinase 2; str 89.5 0.11 3.7E-06 48.5 1.4 19 334-352 29-47 (243)
180 2yv5_A YJEQ protein; hydrolase 89.4 0.12 4E-06 50.3 1.7 33 320-352 142-183 (302)
181 2f1r_A Molybdopterin-guanine d 89.4 0.061 2.1E-06 48.5 -0.3 18 335-352 3-20 (171)
182 1njg_A DNA polymerase III subu 89.4 0.12 4.1E-06 45.0 1.5 18 335-352 46-63 (250)
183 2yl4_A ATP-binding cassette SU 89.2 0.14 4.8E-06 54.2 2.1 21 332-352 368-388 (595)
184 1a7j_A Phosphoribulokinase; tr 89.2 0.13 4.5E-06 49.8 1.8 19 334-352 5-23 (290)
185 2chg_A Replication factor C sm 89.2 0.11 3.6E-06 45.0 1.0 17 336-352 40-56 (226)
186 3b60_A Lipid A export ATP-bind 89.2 0.13 4.6E-06 54.1 2.0 21 332-352 367-387 (582)
187 1zuh_A Shikimate kinase; alpha 89.1 0.12 4.1E-06 44.5 1.3 18 335-352 8-25 (168)
188 3co5_A Putative two-component 89.1 0.11 3.9E-06 44.3 1.2 18 335-352 28-45 (143)
189 1lw7_A Transcriptional regulat 89.0 0.09 3.1E-06 51.9 0.5 19 334-352 170-188 (365)
190 1d2n_A N-ethylmaleimide-sensit 89.0 0.11 3.7E-06 48.5 1.0 18 335-352 65-82 (272)
191 2qby_A CDC6 homolog 1, cell di 88.9 0.13 4.5E-06 48.9 1.6 21 332-352 43-63 (386)
192 1vma_A Cell division protein F 88.9 0.12 4E-06 50.9 1.2 43 304-352 79-122 (306)
193 2yhs_A FTSY, cell division pro 88.9 0.13 4.3E-06 54.6 1.5 21 332-352 291-311 (503)
194 1l8q_A Chromosomal replication 88.9 0.12 4.1E-06 49.5 1.2 19 334-352 37-55 (324)
195 1nrj_B SR-beta, signal recogni 88.8 0.16 5.4E-06 45.0 2.0 19 334-352 12-30 (218)
196 4a82_A Cystic fibrosis transme 88.8 0.14 4.9E-06 54.0 1.9 21 332-352 365-385 (578)
197 1e4v_A Adenylate kinase; trans 88.8 0.12 4E-06 46.6 1.1 17 336-352 2-18 (214)
198 2pt7_A CAG-ALFA; ATPase, prote 88.7 0.12 4.2E-06 50.9 1.3 21 332-352 169-189 (330)
199 1np6_A Molybdopterin-guanine d 88.7 0.14 4.8E-06 46.3 1.5 18 335-352 7-24 (174)
200 3cr8_A Sulfate adenylyltranfer 88.7 0.085 2.9E-06 56.1 0.1 21 332-352 367-387 (552)
201 2vf7_A UVRA2, excinuclease ABC 88.6 0.21 7.1E-06 55.9 3.2 34 320-353 14-55 (842)
202 3tqc_A Pantothenate kinase; bi 88.6 0.13 4.3E-06 51.2 1.3 18 335-352 93-110 (321)
203 3b5x_A Lipid A export ATP-bind 88.6 0.15 5E-06 53.9 1.8 21 332-352 367-387 (582)
204 2ewv_A Twitching motility prot 88.5 0.14 4.8E-06 51.4 1.6 21 332-352 134-154 (372)
205 1ofh_A ATP-dependent HSL prote 88.5 0.12 4.1E-06 48.1 1.0 20 333-352 49-68 (310)
206 2xb4_A Adenylate kinase; ATP-b 88.5 0.12 4.2E-06 47.2 1.0 17 336-352 2-18 (223)
207 3ux8_A Excinuclease ABC, A sub 88.4 0.14 4.8E-06 54.9 1.6 20 332-351 42-61 (670)
208 3ux8_A Excinuclease ABC, A sub 88.4 0.14 4.8E-06 54.9 1.6 20 332-351 346-365 (670)
209 1g8f_A Sulfate adenylyltransfe 88.4 0.1 3.5E-06 55.2 0.5 21 332-352 393-413 (511)
210 2f9l_A RAB11B, member RAS onco 88.4 0.14 4.9E-06 45.0 1.4 17 336-352 7-23 (199)
211 1xjc_A MOBB protein homolog; s 88.4 0.14 4.9E-06 46.5 1.4 18 335-352 5-22 (169)
212 3eie_A Vacuolar protein sortin 88.4 0.15 5.1E-06 49.3 1.6 45 303-352 25-69 (322)
213 3be4_A Adenylate kinase; malar 88.3 0.16 5.4E-06 46.1 1.6 19 334-352 5-23 (217)
214 1uj2_A Uridine-cytidine kinase 88.3 0.14 4.7E-06 47.7 1.3 18 335-352 23-40 (252)
215 2zej_A Dardarin, leucine-rich 88.3 0.14 4.6E-06 44.6 1.1 17 336-352 4-20 (184)
216 1pzn_A RAD51, DNA repair and r 88.3 0.13 4.5E-06 51.0 1.2 21 332-352 129-149 (349)
217 3qf4_B Uncharacterized ABC tra 88.3 0.18 6E-06 53.6 2.2 22 331-352 378-399 (598)
218 2rcn_A Probable GTPase ENGC; Y 88.2 0.16 5.4E-06 51.4 1.7 20 333-352 214-233 (358)
219 3zvl_A Bifunctional polynucleo 88.2 0.16 5.4E-06 51.5 1.7 20 333-352 257-276 (416)
220 4fcw_A Chaperone protein CLPB; 88.2 0.14 4.9E-06 48.0 1.3 18 335-352 48-65 (311)
221 3ake_A Cytidylate kinase; CMP 88.1 0.15 5E-06 44.9 1.3 17 336-352 4-20 (208)
222 1yqt_A RNAse L inhibitor; ATP- 88.1 0.17 5.8E-06 53.3 1.9 21 332-352 45-65 (538)
223 2ce2_X GTPase HRAS; signaling 88.0 0.16 5.3E-06 41.8 1.3 17 336-352 5-21 (166)
224 2v1u_A Cell division control p 88.0 0.13 4.6E-06 49.0 1.0 20 333-352 43-62 (387)
225 3lda_A DNA repair protein RAD5 88.0 0.16 5.5E-06 51.8 1.6 21 332-352 176-196 (400)
226 2wji_A Ferrous iron transport 88.0 0.16 5.6E-06 43.2 1.4 17 336-352 5-21 (165)
227 1sxj_C Activator 1 40 kDa subu 87.9 0.15 5.1E-06 49.4 1.2 16 337-352 49-64 (340)
228 3r20_A Cytidylate kinase; stru 87.9 0.15 5.2E-06 48.5 1.3 18 335-352 10-27 (233)
229 1ak2_A Adenylate kinase isoenz 87.8 0.19 6.3E-06 46.1 1.8 20 333-352 15-34 (233)
230 2npi_A Protein CLP1; CLP1-PCF1 87.8 0.17 5.7E-06 52.6 1.6 21 332-352 136-156 (460)
231 2r62_A Cell division protease 87.8 0.068 2.3E-06 49.4 -1.2 17 336-352 46-62 (268)
232 3hws_A ATP-dependent CLP prote 87.7 0.15 5E-06 50.0 1.1 20 333-352 50-69 (363)
233 1xwi_A SKD1 protein; VPS4B, AA 87.7 0.17 5.8E-06 49.3 1.5 19 334-352 45-63 (322)
234 1svm_A Large T antigen; AAA+ f 87.7 0.18 6.2E-06 51.1 1.8 21 332-352 167-187 (377)
235 1p5z_B DCK, deoxycytidine kina 87.7 0.16 5.5E-06 47.4 1.3 22 331-352 21-42 (263)
236 3jvv_A Twitching mobility prot 87.6 0.17 5.7E-06 50.8 1.5 19 334-352 123-141 (356)
237 1fnn_A CDC6P, cell division co 87.6 0.2 6.7E-06 48.1 1.9 17 336-352 46-62 (389)
238 1nij_A Hypothetical protein YJ 87.6 0.18 6.2E-06 49.1 1.7 18 335-352 5-22 (318)
239 3j16_B RLI1P; ribosome recycli 87.6 0.19 6.4E-06 54.1 1.9 22 331-352 100-121 (608)
240 3t15_A Ribulose bisphosphate c 87.3 0.18 6.3E-06 48.3 1.5 18 335-352 37-54 (293)
241 3qf4_A ABC transporter, ATP-bi 87.3 0.2 7E-06 53.0 2.0 21 332-352 367-387 (587)
242 1t9h_A YLOQ, probable GTPase E 87.2 0.095 3.2E-06 51.8 -0.6 21 332-352 171-191 (307)
243 2wjg_A FEOB, ferrous iron tran 87.2 0.19 6.6E-06 43.0 1.4 17 336-352 9-25 (188)
244 1tf7_A KAIC; homohexamer, hexa 87.1 0.2 7E-06 52.0 1.8 21 332-352 37-57 (525)
245 3ozx_A RNAse L inhibitor; ATP 87.1 0.19 6.4E-06 53.1 1.5 21 332-352 292-312 (538)
246 1kao_A RAP2A; GTP-binding prot 87.1 0.19 6.3E-06 41.6 1.2 16 336-351 5-20 (167)
247 1u8z_A RAS-related protein RAL 87.0 0.19 6.5E-06 41.5 1.2 17 336-352 6-22 (168)
248 1sxj_E Activator 1 40 kDa subu 86.9 0.17 5.8E-06 48.5 1.0 16 337-352 39-54 (354)
249 1z2a_A RAS-related protein RAB 86.9 0.19 6.5E-06 41.8 1.2 17 336-352 7-23 (168)
250 2f6r_A COA synthase, bifunctio 86.8 0.19 6.6E-06 48.0 1.3 18 335-352 76-93 (281)
251 1ek0_A Protein (GTP-binding pr 86.8 0.2 6.7E-06 41.7 1.2 16 336-351 5-20 (170)
252 3q72_A GTP-binding protein RAD 86.8 0.2 7E-06 41.8 1.3 17 336-352 4-20 (166)
253 2dyk_A GTP-binding protein; GT 86.7 0.22 7.4E-06 41.3 1.4 17 336-352 3-19 (161)
254 2qgz_A Helicase loader, putati 86.7 0.2 6.8E-06 48.7 1.4 19 334-352 152-170 (308)
255 3ozx_A RNAse L inhibitor; ATP 86.7 0.2 6.9E-06 52.9 1.5 29 323-352 15-43 (538)
256 2qby_B CDC6 homolog 3, cell di 86.7 0.25 8.5E-06 47.6 2.0 19 334-352 45-63 (384)
257 2qag_B Septin-6, protein NEDD5 86.7 0.23 7.9E-06 51.4 1.9 21 332-352 38-60 (427)
258 3m6a_A ATP-dependent protease 86.6 0.2 6.9E-06 52.6 1.5 20 333-352 107-126 (543)
259 1c1y_A RAS-related protein RAP 86.6 0.2 6.9E-06 41.6 1.2 17 336-352 5-21 (167)
260 2ged_A SR-beta, signal recogni 86.6 0.22 7.5E-06 43.0 1.4 18 335-352 49-66 (193)
261 3pfi_A Holliday junction ATP-d 86.5 0.19 6.3E-06 48.1 1.0 17 336-352 57-73 (338)
262 3q85_A GTP-binding protein REM 86.5 0.21 7.1E-06 41.9 1.2 17 336-352 4-20 (169)
263 1ky3_A GTP-binding protein YPT 86.5 0.21 7.1E-06 42.1 1.2 17 336-352 10-26 (182)
264 1q3t_A Cytidylate kinase; nucl 86.5 0.25 8.5E-06 45.4 1.8 20 333-352 15-34 (236)
265 3pih_A Uvrabc system protein A 86.5 0.24 8.1E-06 55.9 2.0 22 332-353 22-43 (916)
266 2zts_A Putative uncharacterize 86.4 0.23 7.8E-06 44.6 1.5 21 332-352 28-48 (251)
267 1g16_A RAS-related protein SEC 86.4 0.22 7.5E-06 41.5 1.3 17 336-352 5-21 (170)
268 1zu4_A FTSY; GTPase, signal re 86.3 0.2 6.8E-06 49.4 1.2 21 332-352 103-123 (320)
269 3bk7_A ABC transporter ATP-bin 86.2 0.25 8.5E-06 53.0 1.9 21 332-352 115-135 (607)
270 1z08_A RAS-related protein RAB 86.1 0.22 7.5E-06 41.6 1.2 16 336-351 8-23 (170)
271 2fn4_A P23, RAS-related protei 86.1 0.23 7.9E-06 41.8 1.3 18 335-352 10-27 (181)
272 2nzj_A GTP-binding protein REM 86.1 0.22 7.6E-06 41.8 1.2 17 336-352 6-22 (175)
273 2bjv_A PSP operon transcriptio 85.9 0.21 7.1E-06 46.3 1.0 18 335-352 30-47 (265)
274 3pqc_A Probable GTP-binding pr 85.9 0.26 8.8E-06 42.2 1.5 18 335-352 24-41 (195)
275 2erx_A GTP-binding protein DI- 85.9 0.23 8E-06 41.3 1.2 17 336-352 5-21 (172)
276 1r8s_A ADP-ribosylation factor 85.8 0.24 8.1E-06 41.3 1.2 17 336-352 2-18 (164)
277 1m8p_A Sulfate adenylyltransfe 85.8 0.24 8.2E-06 52.8 1.6 21 332-352 394-414 (573)
278 1g8p_A Magnesium-chelatase 38 85.8 0.19 6.5E-06 47.8 0.7 16 337-352 48-63 (350)
279 1wms_A RAB-9, RAB9, RAS-relate 85.7 0.24 8.1E-06 41.8 1.2 17 336-352 9-25 (177)
280 2ocp_A DGK, deoxyguanosine kin 85.7 0.24 8.1E-06 45.6 1.3 19 334-352 2-20 (241)
281 1hqc_A RUVB; extended AAA-ATPa 85.7 0.21 7.3E-06 47.1 1.0 18 335-352 39-56 (324)
282 1um8_A ATP-dependent CLP prote 85.6 0.22 7.5E-06 48.8 1.0 19 334-352 72-90 (376)
283 3j16_B RLI1P; ribosome recycli 85.6 0.28 9.4E-06 52.8 1.9 21 332-352 376-396 (608)
284 3d8b_A Fidgetin-like protein 1 85.5 0.28 9.7E-06 48.2 1.8 21 332-352 115-135 (357)
285 3a8t_A Adenylate isopentenyltr 85.5 0.25 8.5E-06 49.8 1.4 20 333-352 39-58 (339)
286 1r2q_A RAS-related protein RAB 85.5 0.25 8.5E-06 41.0 1.2 17 336-352 8-24 (170)
287 3kkq_A RAS-related protein M-R 85.4 0.33 1.1E-05 41.4 2.0 17 336-352 20-36 (183)
288 2c9o_A RUVB-like 1; hexameric 85.3 0.26 9E-06 50.2 1.5 18 335-352 64-81 (456)
289 1upt_A ARL1, ADP-ribosylation 85.3 0.26 8.8E-06 41.2 1.2 18 335-352 8-25 (171)
290 2y8e_A RAB-protein 6, GH09086P 85.3 0.27 9.1E-06 41.3 1.3 17 336-352 16-32 (179)
291 3umf_A Adenylate kinase; rossm 85.3 0.28 9.5E-06 46.0 1.5 21 332-352 27-47 (217)
292 3bc1_A RAS-related protein RAB 85.3 0.26 8.8E-06 41.9 1.2 17 336-352 13-29 (195)
293 1yqt_A RNAse L inhibitor; ATP- 85.2 0.28 9.5E-06 51.7 1.7 21 332-352 310-330 (538)
294 1p9r_A General secretion pathw 85.1 0.27 9.3E-06 50.4 1.5 20 333-352 166-185 (418)
295 2grj_A Dephospho-COA kinase; T 85.1 0.27 9.1E-06 44.9 1.3 18 335-352 13-30 (192)
296 1z0j_A RAB-22, RAS-related pro 85.1 0.27 9.2E-06 41.0 1.2 17 336-352 8-24 (170)
297 3tw8_B RAS-related protein RAB 85.1 0.27 9.1E-06 41.4 1.2 17 336-352 11-27 (181)
298 4edh_A DTMP kinase, thymidylat 85.0 0.26 8.8E-06 45.7 1.2 19 334-352 6-24 (213)
299 2ygr_A Uvrabc system protein A 85.0 0.29 9.9E-06 55.8 1.7 22 332-353 44-65 (993)
300 3con_A GTPase NRAS; structural 84.9 0.27 9.4E-06 42.3 1.2 17 336-352 23-39 (190)
301 4dsu_A GTPase KRAS, isoform 2B 84.8 0.28 9.4E-06 41.7 1.2 17 336-352 6-22 (189)
302 3lv8_A DTMP kinase, thymidylat 84.8 0.31 1E-05 46.3 1.6 19 334-352 27-45 (236)
303 2r6f_A Excinuclease ABC subuni 84.8 0.3 1E-05 55.5 1.8 21 333-353 43-63 (972)
304 1sxj_D Activator 1 41 kDa subu 84.8 0.25 8.7E-06 46.9 1.0 16 337-352 61-76 (353)
305 4tmk_A Protein (thymidylate ki 84.8 0.31 1.1E-05 45.3 1.6 19 334-352 3-21 (213)
306 1moz_A ARL1, ADP-ribosylation 84.8 0.27 9.1E-06 41.8 1.1 19 334-352 18-36 (183)
307 3v9p_A DTMP kinase, thymidylat 84.7 0.3 1E-05 46.0 1.5 20 333-352 24-43 (227)
308 2a9k_A RAS-related protein RAL 84.7 0.29 9.8E-06 41.4 1.2 17 336-352 20-36 (187)
309 2cxx_A Probable GTP-binding pr 84.6 0.29 1E-05 41.7 1.3 17 336-352 3-19 (190)
310 2qp9_X Vacuolar protein sortin 84.6 0.26 8.8E-06 48.7 1.0 18 335-352 85-102 (355)
311 2hxs_A RAB-26, RAS-related pro 84.5 0.29 1E-05 41.3 1.2 17 336-352 8-24 (178)
312 3ihw_A Centg3; RAS, centaurin, 84.5 0.29 9.9E-06 42.8 1.2 17 336-352 22-38 (184)
313 1mh1_A RAC1; GTP-binding, GTPa 84.4 0.3 1E-05 41.4 1.2 16 336-351 7-22 (186)
314 2g6b_A RAS-related protein RAB 84.4 0.3 1E-05 41.3 1.2 17 336-352 12-28 (180)
315 1svi_A GTP-binding protein YSX 84.4 0.33 1.1E-05 41.8 1.5 19 334-352 23-41 (195)
316 2axn_A 6-phosphofructo-2-kinas 84.3 0.43 1.5E-05 50.1 2.6 18 335-352 36-53 (520)
317 2bov_A RAla, RAS-related prote 84.3 0.3 1E-05 42.3 1.2 17 336-352 16-32 (206)
318 3pvs_A Replication-associated 84.3 0.29 9.9E-06 50.4 1.3 17 336-352 52-68 (447)
319 2qm8_A GTPase/ATPase; G protei 84.3 0.32 1.1E-05 48.0 1.5 21 332-352 53-73 (337)
320 3sr0_A Adenylate kinase; phosp 84.2 0.3 1E-05 45.1 1.3 17 336-352 2-18 (206)
321 3bk7_A ABC transporter ATP-bin 84.2 0.33 1.1E-05 52.1 1.7 21 332-352 380-400 (607)
322 3ld9_A DTMP kinase, thymidylat 84.2 0.32 1.1E-05 45.9 1.4 22 331-352 18-39 (223)
323 1tf7_A KAIC; homohexamer, hexa 84.2 0.32 1.1E-05 50.5 1.6 21 332-352 279-299 (525)
324 3exa_A TRNA delta(2)-isopenten 84.1 0.29 9.8E-06 49.2 1.1 19 334-352 3-21 (322)
325 1z0f_A RAB14, member RAS oncog 84.1 0.31 1.1E-05 40.9 1.2 17 336-352 17-33 (179)
326 2fu5_C RAS-related protein RAB 84.1 0.34 1.2E-05 41.3 1.4 17 336-352 10-26 (183)
327 4b4t_M 26S protease regulatory 84.0 0.31 1E-05 50.6 1.3 45 303-352 188-233 (434)
328 3tmk_A Thymidylate kinase; pho 84.0 0.39 1.3E-05 44.9 1.9 20 333-352 4-23 (216)
329 2oap_1 GSPE-2, type II secreti 84.0 0.32 1.1E-05 51.1 1.5 21 332-352 258-278 (511)
330 2efe_B Small GTP-binding prote 84.0 0.31 1.1E-05 41.2 1.2 16 336-351 14-29 (181)
331 1fzq_A ADP-ribosylation factor 83.9 0.33 1.1E-05 42.1 1.3 18 335-352 17-34 (181)
332 3t5g_A GTP-binding protein RHE 83.9 0.33 1.1E-05 41.3 1.3 16 336-351 8-23 (181)
333 3vfd_A Spastin; ATPase, microt 83.9 0.33 1.1E-05 48.0 1.5 20 333-352 147-166 (389)
334 3t1o_A Gliding protein MGLA; G 83.9 0.32 1.1E-05 41.5 1.2 17 336-352 16-32 (198)
335 3k1j_A LON protease, ATP-depen 83.9 0.29 9.9E-06 51.8 1.1 19 334-352 60-78 (604)
336 2oil_A CATX-8, RAS-related pro 83.7 0.32 1.1E-05 42.0 1.2 17 336-352 27-43 (193)
337 2bme_A RAB4A, RAS-related prot 83.6 0.35 1.2E-05 41.2 1.3 17 336-352 12-28 (186)
338 3crm_A TRNA delta(2)-isopenten 83.6 0.32 1.1E-05 48.6 1.2 18 335-352 6-23 (323)
339 2zr9_A Protein RECA, recombina 83.5 0.37 1.3E-05 48.0 1.6 20 333-352 60-79 (349)
340 4bas_A ADP-ribosylation factor 83.5 0.37 1.3E-05 41.6 1.4 18 335-352 18-35 (199)
341 3bwd_D RAC-like GTP-binding pr 83.5 0.34 1.2E-05 41.0 1.2 18 335-352 9-26 (182)
342 2z43_A DNA repair and recombin 83.4 0.38 1.3E-05 46.8 1.6 21 332-352 105-125 (324)
343 1x6v_B Bifunctional 3'-phospho 83.4 0.36 1.2E-05 52.4 1.6 20 333-352 51-70 (630)
344 3d3q_A TRNA delta(2)-isopenten 83.4 0.34 1.2E-05 48.8 1.3 18 335-352 8-25 (340)
345 1f6b_A SAR1; gtpases, N-termin 83.3 0.33 1.1E-05 42.9 1.1 18 335-352 26-43 (198)
346 3lxx_A GTPase IMAP family memb 83.3 0.37 1.3E-05 44.0 1.4 17 336-352 31-47 (239)
347 2r44_A Uncharacterized protein 83.3 0.21 7.3E-06 47.7 -0.2 19 334-352 46-64 (331)
348 3cbq_A GTP-binding protein REM 83.3 0.35 1.2E-05 42.8 1.2 17 336-352 25-41 (195)
349 2zan_A Vacuolar protein sortin 83.3 0.36 1.2E-05 49.3 1.4 19 334-352 167-185 (444)
350 3clv_A RAB5 protein, putative; 83.2 0.36 1.2E-05 41.1 1.2 17 336-352 9-25 (208)
351 2z4s_A Chromosomal replication 83.1 0.33 1.1E-05 49.6 1.1 19 334-352 130-148 (440)
352 2qnr_A Septin-2, protein NEDD5 83.1 0.36 1.2E-05 46.8 1.3 17 336-352 20-36 (301)
353 2hf9_A Probable hydrogenase ni 83.1 0.4 1.4E-05 42.7 1.5 18 335-352 39-56 (226)
354 3euj_A Chromosome partition pr 83.0 0.38 1.3E-05 50.5 1.6 18 335-352 30-47 (483)
355 4b4t_L 26S protease subunit RP 83.0 0.36 1.2E-05 50.1 1.3 45 303-352 188-233 (437)
356 4b4t_K 26S protease regulatory 83.0 0.35 1.2E-05 50.0 1.3 45 303-352 179-224 (428)
357 2wsm_A Hydrogenase expression/ 83.0 0.4 1.4E-05 42.6 1.5 18 335-352 31-48 (221)
358 1v5w_A DMC1, meiotic recombina 83.0 0.36 1.2E-05 47.6 1.3 21 332-352 120-140 (343)
359 3tkl_A RAS-related protein RAB 82.9 0.37 1.3E-05 41.4 1.2 17 336-352 18-34 (196)
360 1m7b_A RND3/RHOE small GTP-bin 82.9 0.38 1.3E-05 41.4 1.3 17 336-352 9-25 (184)
361 1z06_A RAS-related protein RAB 82.9 0.37 1.3E-05 41.6 1.2 17 336-352 22-38 (189)
362 3hr8_A Protein RECA; alpha and 82.9 0.36 1.2E-05 48.7 1.2 20 333-352 60-79 (356)
363 2h57_A ADP-ribosylation factor 82.7 0.4 1.4E-05 41.5 1.3 18 335-352 22-39 (190)
364 3dz8_A RAS-related protein RAB 82.6 0.4 1.4E-05 41.6 1.3 17 336-352 25-41 (191)
365 2gf0_A GTP-binding protein DI- 82.5 0.4 1.4E-05 41.3 1.3 18 335-352 9-26 (199)
366 1tq4_A IIGP1, interferon-induc 82.4 0.45 1.5E-05 48.9 1.8 18 335-352 70-87 (413)
367 3c5c_A RAS-like protein 12; GD 82.4 0.4 1.4E-05 41.8 1.2 17 336-352 23-39 (187)
368 1iqp_A RFCS; clamp loader, ext 82.4 0.36 1.2E-05 45.1 1.0 17 336-352 48-64 (327)
369 3llm_A ATP-dependent RNA helic 82.2 0.48 1.6E-05 43.4 1.7 19 332-350 74-92 (235)
370 2chq_A Replication factor C sm 82.2 0.38 1.3E-05 44.8 1.0 17 336-352 40-56 (319)
371 1ksh_A ARF-like protein 2; sma 82.2 0.41 1.4E-05 41.0 1.2 19 334-352 18-36 (186)
372 2fh5_B SR-beta, signal recogni 82.1 0.44 1.5E-05 42.0 1.4 18 335-352 8-25 (214)
373 1ls1_A Signal recognition part 82.1 0.36 1.2E-05 46.8 0.9 20 333-352 97-116 (295)
374 3kl4_A SRP54, signal recogniti 82.1 0.3 1E-05 50.6 0.3 20 333-352 96-115 (433)
375 3l0i_B RAS-related protein RAB 82.1 0.49 1.7E-05 41.4 1.7 17 336-352 35-51 (199)
376 2gf9_A RAS-related protein RAB 82.1 0.42 1.4E-05 41.3 1.2 17 336-352 24-40 (189)
377 2i1q_A DNA repair and recombin 82.1 0.4 1.4E-05 46.1 1.2 21 332-352 96-116 (322)
378 2iwr_A Centaurin gamma 1; ANK 82.1 0.34 1.2E-05 41.1 0.6 17 336-352 9-25 (178)
379 3foz_A TRNA delta(2)-isopenten 81.9 0.4 1.4E-05 48.0 1.1 19 334-352 10-28 (316)
380 1sky_E F1-ATPase, F1-ATP synth 81.9 0.47 1.6E-05 49.9 1.7 19 334-352 151-169 (473)
381 3llu_A RAS-related GTP-binding 81.9 0.44 1.5E-05 41.7 1.3 17 335-351 21-37 (196)
382 1m2o_B GTP-binding protein SAR 81.8 0.44 1.5E-05 41.7 1.3 20 333-352 22-41 (190)
383 1vg8_A RAS-related protein RAB 81.8 0.43 1.5E-05 41.5 1.2 17 336-352 10-26 (207)
384 1zj6_A ADP-ribosylation factor 81.8 0.49 1.7E-05 40.8 1.5 18 335-352 17-34 (187)
385 1zbd_A Rabphilin-3A; G protein 81.7 0.44 1.5E-05 41.6 1.2 17 336-352 10-26 (203)
386 3reg_A RHO-like small GTPase; 81.6 0.44 1.5E-05 41.3 1.2 17 336-352 25-41 (194)
387 3oes_A GTPase rhebl1; small GT 81.5 0.46 1.6E-05 41.7 1.3 17 336-352 26-42 (201)
388 2h17_A ADP-ribosylation factor 81.5 0.43 1.5E-05 41.0 1.1 18 335-352 22-39 (181)
389 2fg5_A RAB-22B, RAS-related pr 81.5 0.46 1.6E-05 41.3 1.3 17 336-352 25-41 (192)
390 2a5j_A RAS-related protein RAB 81.4 0.45 1.5E-05 41.3 1.2 17 336-352 23-39 (191)
391 1bif_A 6-phosphofructo-2-kinas 81.4 0.44 1.5E-05 48.8 1.3 18 335-352 40-57 (469)
392 2bcg_Y Protein YP2, GTP-bindin 81.4 0.47 1.6E-05 41.5 1.3 17 336-352 10-26 (206)
393 1x3s_A RAS-related protein RAB 81.4 0.46 1.6E-05 40.7 1.2 17 336-352 17-33 (195)
394 2il1_A RAB12; G-protein, GDP, 81.3 0.46 1.6E-05 41.5 1.2 17 336-352 28-44 (192)
395 1ypw_A Transitional endoplasmi 81.3 0.42 1.4E-05 52.7 1.2 21 332-352 236-256 (806)
396 2q3h_A RAS homolog gene family 81.2 0.46 1.6E-05 41.3 1.2 18 335-352 21-38 (201)
397 4b4t_J 26S protease regulatory 81.2 0.42 1.4E-05 49.3 1.0 18 335-352 183-200 (405)
398 2atv_A RERG, RAS-like estrogen 81.2 0.46 1.6E-05 41.4 1.2 18 335-352 29-46 (196)
399 2yc2_C IFT27, small RAB-relate 81.1 0.35 1.2E-05 41.8 0.4 17 336-352 22-38 (208)
400 4aby_A DNA repair protein RECN 81.1 0.26 8.9E-06 48.7 -0.5 19 332-351 59-77 (415)
401 1w1w_A Structural maintenance 80.9 0.54 1.9E-05 47.3 1.7 19 333-351 25-43 (430)
402 2o52_A RAS-related protein RAB 80.9 0.5 1.7E-05 41.6 1.3 17 336-352 27-43 (200)
403 2fv8_A H6, RHO-related GTP-bin 80.8 0.5 1.7E-05 41.7 1.3 17 336-352 27-43 (207)
404 3cph_A RAS-related protein SEC 80.7 0.49 1.7E-05 41.3 1.2 18 335-352 21-38 (213)
405 2ew1_A RAS-related protein RAB 80.7 0.51 1.7E-05 42.2 1.3 17 336-352 28-44 (201)
406 4gzl_A RAS-related C3 botulinu 80.7 0.51 1.8E-05 41.8 1.3 17 335-351 31-47 (204)
407 1sxj_B Activator 1 37 kDa subu 80.6 0.46 1.6E-05 44.3 1.0 16 337-352 45-60 (323)
408 4djt_A GTP-binding nuclear pro 80.5 0.51 1.7E-05 41.7 1.2 17 336-352 13-29 (218)
409 1zd9_A ADP-ribosylation factor 80.4 0.52 1.8E-05 40.9 1.2 18 335-352 23-40 (188)
410 2qu8_A Putative nucleolar GTP- 80.4 0.55 1.9E-05 42.3 1.4 19 334-352 29-47 (228)
411 3k53_A Ferrous iron transport 80.4 0.57 1.9E-05 43.9 1.6 17 336-352 5-21 (271)
412 2f7s_A C25KG, RAS-related prot 80.3 0.51 1.7E-05 41.7 1.1 17 336-352 27-43 (217)
413 2x77_A ADP-ribosylation factor 80.3 0.5 1.7E-05 40.7 1.1 19 334-352 22-40 (189)
414 2p5s_A RAS and EF-hand domain 80.2 0.52 1.8E-05 41.3 1.2 18 335-352 29-46 (199)
415 1jr3_A DNA polymerase III subu 80.2 0.64 2.2E-05 44.5 1.9 18 335-352 39-56 (373)
416 2dhr_A FTSH; AAA+ protein, hex 80.2 0.48 1.6E-05 49.8 1.1 16 337-352 67-82 (499)
417 1f2t_A RAD50 ABC-ATPase; DNA d 80.2 0.58 2E-05 40.7 1.4 16 335-350 24-39 (149)
418 3gj0_A GTP-binding nuclear pro 80.0 0.55 1.9E-05 41.8 1.3 17 336-352 17-33 (221)
419 2atx_A Small GTP binding prote 80.0 0.56 1.9E-05 40.5 1.3 17 336-352 20-36 (194)
420 3qf7_A RAD50; ABC-ATPase, ATPa 79.9 0.53 1.8E-05 46.9 1.2 17 333-350 23-39 (365)
421 2j0v_A RAC-like GTP-binding pr 79.9 0.56 1.9E-05 41.2 1.3 17 336-352 11-27 (212)
422 4f4c_A Multidrug resistance pr 79.8 0.69 2.4E-05 53.8 2.3 21 332-352 1103-1123(1321)
423 2b6h_A ADP-ribosylation factor 79.8 0.57 2E-05 41.0 1.3 19 334-352 29-47 (192)
424 3eph_A TRNA isopentenyltransfe 79.8 0.56 1.9E-05 48.5 1.4 18 335-352 3-20 (409)
425 1ojl_A Transcriptional regulat 79.7 0.55 1.9E-05 45.3 1.3 19 334-352 25-43 (304)
426 2j1l_A RHO-related GTP-binding 79.7 0.57 2E-05 41.8 1.3 17 336-352 36-52 (214)
427 1sxj_A Activator 1 95 kDa subu 79.7 0.56 1.9E-05 48.6 1.4 18 335-352 78-95 (516)
428 2ce7_A Cell division protein F 79.6 0.51 1.7E-05 49.3 1.0 18 335-352 50-67 (476)
429 2h92_A Cytidylate kinase; ross 79.5 0.55 1.9E-05 41.9 1.1 18 335-352 4-21 (219)
430 2xtp_A GTPase IMAP family memb 79.4 0.63 2.2E-05 42.9 1.5 18 335-352 23-40 (260)
431 2vhj_A Ntpase P4, P4; non- hyd 79.3 0.55 1.9E-05 47.3 1.1 19 334-352 123-141 (331)
432 3hu3_A Transitional endoplasmi 79.2 0.59 2E-05 48.7 1.4 19 334-352 238-256 (489)
433 2iw3_A Elongation factor 3A; a 79.2 0.6 2.1E-05 53.2 1.5 21 332-352 459-479 (986)
434 4f4c_A Multidrug resistance pr 79.2 0.68 2.3E-05 53.8 2.0 21 332-352 442-462 (1321)
435 1j8m_F SRP54, signal recogniti 79.2 0.57 2E-05 45.6 1.2 19 334-352 98-116 (297)
436 2gco_A H9, RHO-related GTP-bin 79.1 0.62 2.1E-05 40.9 1.3 17 336-352 27-43 (201)
437 1e69_A Chromosome segregation 78.9 0.75 2.6E-05 44.6 1.9 16 336-351 26-41 (322)
438 3te6_A Regulatory protein SIR3 78.9 0.5 1.7E-05 46.9 0.7 22 331-352 42-63 (318)
439 2qen_A Walker-type ATPase; unk 78.9 0.71 2.4E-05 43.3 1.7 18 335-352 32-49 (350)
440 2ffh_A Protein (FFH); SRP54, s 78.9 0.54 1.8E-05 48.5 0.9 44 303-352 73-116 (425)
441 4b4t_I 26S protease regulatory 78.9 0.6 2.1E-05 48.7 1.3 45 303-352 189-234 (437)
442 2cjw_A GTP-binding protein GEM 78.9 0.62 2.1E-05 41.0 1.2 17 336-352 8-24 (192)
443 3bh0_A DNAB-like replicative h 78.8 0.71 2.4E-05 44.8 1.7 21 332-352 66-86 (315)
444 3g5u_A MCG1178, multidrug resi 78.8 0.7 2.4E-05 53.6 2.0 21 332-352 414-434 (1284)
445 1gwn_A RHO-related GTP-binding 78.8 0.64 2.2E-05 41.6 1.3 17 336-352 30-46 (205)
446 3ice_A Transcription terminati 78.6 0.7 2.4E-05 48.1 1.7 20 333-352 173-192 (422)
447 4dhe_A Probable GTP-binding pr 78.6 0.38 1.3E-05 42.6 -0.3 19 334-352 29-47 (223)
448 4b4t_H 26S protease regulatory 78.5 0.53 1.8E-05 49.5 0.8 19 334-352 243-261 (467)
449 3t5d_A Septin-7; GTP-binding p 78.4 0.7 2.4E-05 43.5 1.5 17 336-352 10-26 (274)
450 2gks_A Bifunctional SAT/APS ki 78.3 0.61 2.1E-05 49.3 1.2 21 332-352 370-390 (546)
451 2vf7_A UVRA2, excinuclease ABC 78.2 0.7 2.4E-05 51.7 1.7 21 332-352 521-541 (842)
452 2hup_A RAS-related protein RAB 78.2 0.68 2.3E-05 40.8 1.3 17 336-352 31-47 (201)
453 2qag_C Septin-7; cell cycle, c 78.1 0.68 2.3E-05 47.5 1.4 16 337-352 34-49 (418)
454 3nbx_X ATPase RAVA; AAA+ ATPas 77.9 0.71 2.4E-05 48.4 1.5 19 334-352 41-59 (500)
455 3io5_A Recombination and repai 77.9 0.62 2.1E-05 47.0 1.0 19 333-352 28-46 (333)
456 3th5_A RAS-related C3 botulinu 79.1 0.47 1.6E-05 41.6 0.0 17 335-351 31-47 (204)
457 3dm5_A SRP54, signal recogniti 77.3 0.63 2.2E-05 48.4 0.9 20 333-352 99-118 (443)
458 3q3j_B RHO-related GTP-binding 77.3 0.72 2.5E-05 41.3 1.2 17 336-352 29-45 (214)
459 2v3c_C SRP54, signal recogniti 77.2 0.67 2.3E-05 47.7 1.1 19 334-352 99-117 (432)
460 1u94_A RECA protein, recombina 77.2 0.78 2.7E-05 45.9 1.5 20 333-352 62-81 (356)
461 3lxw_A GTPase IMAP family memb 77.1 0.71 2.4E-05 43.0 1.2 17 336-352 23-39 (247)
462 3pxg_A Negative regulator of g 77.1 0.67 2.3E-05 47.6 1.0 17 336-352 203-219 (468)
463 2www_A Methylmalonic aciduria 77.1 0.8 2.7E-05 45.3 1.5 21 332-352 72-92 (349)
464 3g5u_A MCG1178, multidrug resi 77.0 0.83 2.8E-05 53.0 1.9 21 332-352 1057-1077(1284)
465 1tue_A Replication protein E1; 76.8 0.7 2.4E-05 43.9 1.0 19 334-352 58-76 (212)
466 2fna_A Conserved hypothetical 76.5 0.86 3E-05 42.7 1.5 18 335-352 31-48 (357)
467 2orw_A Thymidine kinase; TMTK, 76.4 0.98 3.3E-05 40.6 1.8 19 334-352 3-21 (184)
468 3cpj_B GTP-binding protein YPT 76.2 0.79 2.7E-05 41.0 1.1 17 336-352 15-31 (223)
469 3pih_A Uvrabc system protein A 76.0 0.88 3E-05 51.4 1.7 20 332-351 608-627 (916)
470 3qks_A DNA double-strand break 75.8 0.91 3.1E-05 41.3 1.4 17 335-351 24-40 (203)
471 2ga8_A Hypothetical 39.9 kDa p 75.5 0.88 3E-05 46.3 1.4 17 336-352 26-42 (359)
472 2r6a_A DNAB helicase, replicat 75.5 0.98 3.3E-05 46.0 1.7 21 332-352 201-221 (454)
473 2xxa_A Signal recognition part 75.2 0.84 2.9E-05 47.0 1.2 19 334-352 100-118 (433)
474 1wb9_A DNA mismatch repair pro 75.1 1 3.5E-05 50.0 1.9 20 332-351 605-624 (800)
475 3def_A T7I23.11 protein; chlor 75.0 1 3.4E-05 42.1 1.5 17 336-352 38-54 (262)
476 2o5v_A DNA replication and rep 74.8 0.91 3.1E-05 45.6 1.3 19 332-351 25-43 (359)
477 1h65_A Chloroplast outer envel 74.7 1 3.5E-05 42.2 1.5 17 336-352 41-57 (270)
478 1g41_A Heat shock protein HSLU 74.6 0.85 2.9E-05 47.4 1.0 18 335-352 51-68 (444)
479 1w5s_A Origin recognition comp 74.4 0.71 2.4E-05 44.7 0.4 19 334-352 50-70 (412)
480 2iw3_A Elongation factor 3A; a 74.3 0.61 2.1E-05 53.1 -0.2 21 332-352 697-717 (986)
481 1ni3_A YCHF GTPase, YCHF GTP-b 73.9 1.3 4.3E-05 45.2 2.1 20 332-351 18-37 (392)
482 2ygr_A Uvrabc system protein A 73.9 1.1 3.7E-05 51.2 1.7 21 332-352 666-686 (993)
483 2g3y_A GTP-binding protein GEM 73.6 1 3.5E-05 41.2 1.2 17 336-352 39-55 (211)
484 3iby_A Ferrous iron transport 73.6 1.2 4E-05 42.0 1.6 17 336-352 3-19 (256)
485 3qkt_A DNA double-strand break 73.4 1 3.5E-05 44.0 1.2 19 333-351 22-40 (339)
486 4ag6_A VIRB4 ATPase, type IV s 73.2 1 3.5E-05 44.5 1.2 19 334-352 35-53 (392)
487 3pxi_A Negative regulator of g 73.2 1 3.5E-05 48.8 1.2 17 336-352 523-539 (758)
488 3b1v_A Ferrous iron uptake tra 72.9 1.2 4E-05 42.7 1.4 17 336-352 5-21 (272)
489 1ewq_A DNA mismatch repair pro 72.7 1.2 4.1E-05 49.2 1.6 18 334-351 576-593 (765)
490 3i8s_A Ferrous iron transport 72.5 1.2 4.2E-05 42.1 1.5 17 336-352 5-21 (274)
491 3szr_A Interferon-induced GTP- 72.5 0.75 2.6E-05 49.1 0.0 15 337-351 48-62 (608)
492 3u61_B DNA polymerase accessor 72.4 1.2 4E-05 42.4 1.3 17 336-352 50-66 (324)
493 2q6t_A DNAB replication FORK h 72.4 1.3 4.5E-05 44.9 1.8 21 332-352 198-218 (444)
494 1xp8_A RECA protein, recombina 72.2 1.3 4.4E-05 44.6 1.6 20 333-352 73-92 (366)
495 1qhl_A Protein (cell division 72.1 0.34 1.2E-05 45.7 -2.5 16 336-351 29-44 (227)
496 3cf2_A TER ATPase, transitiona 71.8 1.2 4E-05 49.7 1.4 18 335-352 239-256 (806)
497 2qag_A Septin-2, protein NEDD5 71.2 1 3.5E-05 44.8 0.6 16 337-352 40-55 (361)
498 1ega_A Protein (GTP-binding pr 70.9 1.4 4.7E-05 42.5 1.5 17 336-352 10-26 (301)
499 3pxi_A Negative regulator of g 70.8 1.4 4.9E-05 47.6 1.7 17 336-352 203-219 (758)
500 2p67_A LAO/AO transport system 70.8 1.5 5E-05 43.1 1.6 21 332-352 54-74 (341)
No 1
>1ii2_A Phosphoenolpyruvate carboxykinase; phosphate binding loop, lyase; 2.00A {Trypanosoma cruzi} SCOP: c.91.1.1 c.109.1.1
Probab=100.00 E-value=1.8e-95 Score=767.98 Aligned_cols=300 Identities=50% Similarity=0.803 Sum_probs=290.7
Q ss_pred ceeEecCCHHHHHHHHHHhcCCcEEecccceEeecCCcccCCCCCeeeecCCCcccccccCC----CCccc---------
Q 013022 142 THVLYNLSPAELYEQAIKYEQGSFIASSGALATLSGAKTGRSPRDKRVVKDETTEHELWWGK----MKNHD--------- 208 (451)
Q Consensus 142 ~~v~~Nls~~eLye~A~~~~eGt~lt~~GAL~v~TG~~TGRSpkDK~IV~d~~t~~~v~Wg~----~~e~~--------- 208 (451)
.+|+||++++||||+|+++++|+++|++|+|+++||++|||||+|||||+++.+++.|||++ ++++.
T Consensus 2 ~~v~~n~~~~eL~e~A~~~~eg~~lt~~Gal~~~tg~~tgRsp~dk~iv~~~~~~~~i~w~~~n~~~~~e~f~~l~~~~~ 81 (524)
T 1ii2_A 2 PTIHRNLLSPELVQWALKIEKDSRLTARGALAVMSYAKTGRSPLDKRIVDTDDVRENVDWGKVNMKLSEESFARVRKIAK 81 (524)
T ss_dssp CEEEESCCHHHHHHHHHHHCTTCEECTTSCEEECCTTCSSBCGGGEEEECCHHHHTTSCBTTTBCEECHHHHHHHHHHHH
T ss_pred CeeEeCCCHHHHHHHHHHhCCCcEEcCCCCEEEecCcccCCCcCceEEeCCCCCccccccCcCcccCCHHHHHHHHHHHH
Confidence 47899999999999999999997799999999999999999999999999999999999997 44432
Q ss_pred -----cc-EEEEEeeecCCCCCeEEEEEechhhhHHHHHHhcCCCCChHhhccCCCCCEEEEEcCCCCCCcccCCCCccc
Q 013022 209 -----VQ-VFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGQFPCNRYTHYMTSST 282 (451)
Q Consensus 209 -----k~-lyv~D~~vG~d~~~~l~vRvite~a~~alfl~NLfirp~~eel~~fg~PDftI~~~P~f~~~~~~~g~~s~t 282 (451)
++ |||+|+++|+|++|++++|+|++++||+||++|||+||.++|+++||+|||+||++|+|.++++.+|++|++
T Consensus 82 ~~l~~k~~l~v~d~~~G~d~~~~~~vrvit~~a~~~lf~~nl~~rp~~~e~~~fg~pd~~i~~~p~f~~~~~~~G~~s~~ 161 (524)
T 1ii2_A 82 EFLDTREHLFVVDCFAGHDERYRLKVRVFTTRPYHALFMRDMLIVPTPEELATFGEPDYVIYNAGECKADPSIPGLTSTT 161 (524)
T ss_dssp HHHHTSSEEEEEEEEECSSTTTCEEEEEEESSHHHHHHHHHHSBCCCHHHHHTCCSCSEEEEEETTSCCCTTSTTCCSSC
T ss_pred HHHcCCCcEEEEeeeeecChhhcccEEEEECHHHHHHHHHHhhccCCHHHhcccCCCCEEEEeCCCccCCcccCCcCccc
Confidence 54 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCeEEEEccccchhhhhHHHHHHHHhcccCCeeeeccccccCCCCCEEEEEecCCCCcccccccCCCceecCC
Q 013022 283 SIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVALFFGLSGTGKTTLSTDHNRYLIGDD 362 (451)
Q Consensus 283 ~i~id~~~~~vlI~GT~YaGEmKKgifTl~n~~l~~~G~LpmH~sanvg~~G~valffGLSGTGKTTLSad~~r~lIgDD 362 (451)
+|++|+++++++|+||+|+|||||++||+|||+++++|+||||||+|++++|++++|||||||||||||+|++|.||+||
T Consensus 162 ~v~~~~~~~~~~I~Gt~Y~GemKK~~ftl~n~~~~~~g~L~~H~san~g~~g~~~~ffGlSGtGKTTLs~d~~r~lIgDD 241 (524)
T 1ii2_A 162 CVALNFKTREQVILGTEYAGEMKKGILTVMFELMPQMNHLCMHASANVGKQGDVTVFFGLSGTGKTTLSADPHRNLIGDD 241 (524)
T ss_dssp EEEEETTTTEEEEESCCCTHHHHHHHHHHHHHHHHHTTCEEESEEEEECTTCCEEEEECCTTSSHHHHHCCTTSEEEESS
T ss_pred EEEEECCCCeEEEECCcchHHHHHHHHHHHHHHHHHCCcEeecceeeeCCCCCEEEEEccCCcchhhhhhccCCeEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecCCCceeccccEEEEeeCCCCCCChhHhhhccccceEeeeEEcCCCCccccCCCCccCcceeEeeccCccccccc
Q 013022 363 EHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTGKIIFCADLFHILIIFDC 441 (451)
Q Consensus 363 e~~w~d~Gvfn~EgGcYaK~idLs~e~EP~I~~Ai~~gavLENVv~D~~~~~vDf~d~s~TeNtR~~yPi~~I~~~~~~ 441 (451)
||+|+++||||+|+|||+|||||++|.||+||+||+||+|||||++|++++.|||+|.++|||||++|||++||++.+.
T Consensus 242 e~~w~~~Gvfn~E~G~y~K~idl~~e~eP~I~~ai~~~~ilENV~~d~~g~~vd~~d~s~t~NtR~~~P~~~i~n~~~~ 320 (524)
T 1ii2_A 242 EHVWTDRGVFNIEGGCYAKAIGLNPKTEKDIYDAVRFGAVAENCVLDKRTGEIDFYDESICKNTRVAYPLSHIEGALSK 320 (524)
T ss_dssp CEEECSSCEEESCSEEEEECTTCCTTTCHHHHHTCSTTCEEESCCBCTTTCSBCTTCCSSCSCCEEEEEGGGSTTCCSS
T ss_pred hhhccCCCccccccceEEEecCCCcccChhHHHhcCcCceEEEEEECCCCCcccCCCCcccCCceEEEEHHHCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998876
No 2
>2olr_A Phosphoenolpyruvate carboxykinase; carbon dioxide, lyase; HET: ATP; 1.60A {Escherichia coli K12} SCOP: c.91.1.1 c.109.1.1 PDB: 1k3c_A* 1k3d_A* 1aq2_A* 2olq_A* 1os1_A* 2pxz_X* 1ayl_A* 2py7_X* 1oen_A 1ylh_A* 1ygg_A*
Probab=100.00 E-value=5.7e-94 Score=756.72 Aligned_cols=304 Identities=44% Similarity=0.744 Sum_probs=290.2
Q ss_pred cccccccCccc-ceeEecCCHHHHHHHHHHhc-----CCcEEecccceEeecCCcccCCCCCeeeecCCCcccccccCC-
Q 013022 131 TISVSDSSLKF-THVLYNLSPAELYEQAIKYE-----QGSFIASSGALATLSGAKTGRSPRDKRVVKDETTEHELWWGK- 203 (451)
Q Consensus 131 ~~~l~~~gl~~-~~v~~Nls~~eLye~A~~~~-----eGt~lt~~GAL~v~TG~~TGRSpkDK~IV~d~~t~~~v~Wg~- 203 (451)
...|+.+||.. .+|+||+++++|||+|++++ +| .++++|+|+++||++|||||+|||||+++.+++.||||+
T Consensus 9 ~~~~~~~gi~~~~~v~~n~~~~~L~e~al~~~~~~~eeg-~l~~~Gal~~~tg~~tgRsp~dk~Iv~~~~~~~~i~w~~~ 87 (540)
T 2olr_A 9 PQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGYERG-VLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADK 87 (540)
T ss_dssp HHHHHHTTCCCCCCEEESCCHHHHHHHHHCTTCCGGGCE-EECTTSCEEECCCSCSSCCGGGEEEECSTTTTTTSCCTTS
T ss_pred ccchhhcCCCCCCeEEeCCCHHHHHHHHHhcCCCccccc-eecCCCCEEEcCCCcccCCCCceEEeCCCCCccccccccc
Confidence 34688999985 69999999999999999888 77 599999999999999999999999999999999999976
Q ss_pred ---------CCccc--------------ccEEEEEeeecCCCCCeEEEEEechhhhHHHHHHhcCCCCChHhhccCCCCC
Q 013022 204 ---------MKNHD--------------VQVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPD 260 (451)
Q Consensus 204 ---------~~e~~--------------k~lyv~D~~vG~d~~~~l~vRvite~a~~alfl~NLfirp~~eel~~fg~PD 260 (451)
++++. ++|||+|+++|+|++|++++|++++++||+||++|||+||..+|+++| +||
T Consensus 88 ~~~~~~N~~~~~e~f~~l~~~~~~~l~~k~lyv~d~~~G~d~~~~~~vr~ite~a~~alf~~nLf~rp~~ee~~~~-~pd 166 (540)
T 2olr_A 88 GKGKNDNKPLSPETWQHLKGLVTRQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGF-KPD 166 (540)
T ss_dssp SSSCCSCEEECHHHHHHHHHHHHHHHTTSCEEEEEEEESSSTTTCEEEEEEESCHHHHHHHHHHSBCCCHHHHHTC-CCS
T ss_pred cccccccCCCCHHHHHHHHHHHHHHHcCCCEEEEeeeeeCChhhceeEEEEeCHHHHHHHHHHhhcCCChHHhcCC-CCC
Confidence 44432 679999999999999999999999999999999999999999999999 999
Q ss_pred EEEEEc-----CCCCCCcccCCCCcccEEEEeccCCeEEEEccccchhhhhHHHHHHHHhcccCCeeeeccccccCCCCC
Q 013022 261 FTIYNA-----GQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGD 335 (451)
Q Consensus 261 ftI~~~-----P~f~~~~~~~g~~s~t~i~id~~~~~vlI~GT~YaGEmKKgifTl~n~~l~~~G~LpmH~sanvg~~G~ 335 (451)
|+||++ |+|.++ |++|+++|++|+++++++|+||+|+|||||++||+|||+++++|+||||||+|++++|+
T Consensus 167 ~~i~~~~~~~~p~f~~~----G~~s~~~v~~~~~~~~~~I~Gt~Y~GemKK~~ftl~n~~l~~~G~L~mH~sanvg~~g~ 242 (540)
T 2olr_A 167 FIVMNGAKCTNPQWKEQ----GLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGD 242 (540)
T ss_dssp EEEEEETTCCCTTTTTT----TCSSSCEEEEETTTTEEEEESCCCTHHHHHHHHHHHHHHTGGGTCEEECEEEEECTTSC
T ss_pred EEEEEeccCCCCCcccC----CccCccEEEEEccCCeEEEeCCcCchHhhhhHHHHhHHHHHHCCcEeecceeeeCCCCC
Confidence 999999 999887 89999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCcccccccCCCceecCCceeecCCCceeccccEEEEeeCCCCCCChhHhhhccccceEeeeEEcCCCCcc
Q 013022 336 VALFFGLSGTGKTTLSTDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREV 415 (451)
Q Consensus 336 valffGLSGTGKTTLSad~~r~lIgDDe~~w~d~Gvfn~EgGcYaK~idLs~e~EP~I~~Ai~~gavLENVv~D~~~~~v 415 (451)
+++|||||||||||||+||+|.||+||||+|+++||||+|+||||||||||+|.||+||+||+|++|||||++|++++.
T Consensus 243 ~~lffGlSGtGKTTLs~d~~r~lIgDDe~~w~~~Gvfn~EgGcyak~i~Ls~e~EP~i~~ai~~~aileNV~~d~~g~~- 321 (540)
T 2olr_A 243 VAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGTI- 321 (540)
T ss_dssp EEEEECSTTSSHHHHHCCTTSEEEESSCEEEETTEEEESCSEEEEECTTCCTTTSHHHHHTCSTTCEEESCEECTTSCE-
T ss_pred EEEEEccCCCCHHHHhcCcCCcEEecCceeecCCCcccccCceEEEeccCCcccChhHHHhcCccceeeeeeEcCCCCe-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred ccCCCCccCcceeEeeccCccccccc
Q 013022 416 DYSDKSVTGKIIFCADLFHILIIFDC 441 (451)
Q Consensus 416 Df~d~s~TeNtR~~yPi~~I~~~~~~ 441 (451)
||+|.++|||||++|||++||++.+.
T Consensus 322 df~d~s~t~NtR~~yPi~~i~n~~~~ 347 (540)
T 2olr_A 322 DFDDGSKTENTRVSYPIYHIDNIVKP 347 (540)
T ss_dssp ETTCCSSCSCCEEEEEGGGSSSBCCS
T ss_pred ecCCCCccccceEEEEHHHCCCcCCc
Confidence 99999999999999999999999764
No 3
>1ytm_A Phosphoenolpyruvate carboxykinase [ATP], phosphoenolpyruvate; domain closure, nucleotide binding; HET: ATP; 2.20A {Anaerobiospirillum succiniciproducens} PDB: 1yvy_A
Probab=100.00 E-value=4.6e-94 Score=757.99 Aligned_cols=305 Identities=44% Similarity=0.740 Sum_probs=292.1
Q ss_pred cccccccCccc-ceeEecCCHHHHHHHHHH---hc--CCcEEecccceEeecCCcccCCCCCeeeecCCCccccccc---
Q 013022 131 TISVSDSSLKF-THVLYNLSPAELYEQAIK---YE--QGSFIASSGALATLSGAKTGRSPRDKRVVKDETTEHELWW--- 201 (451)
Q Consensus 131 ~~~l~~~gl~~-~~v~~Nls~~eLye~A~~---~~--eGt~lt~~GAL~v~TG~~TGRSpkDK~IV~d~~t~~~v~W--- 201 (451)
...|+.+||.. .+|+||+++++|||+|++ ++ +| .++++|+|+++||++|||||+|||||+++.+++ |||
T Consensus 4 ~~~~~~~g~~~~~~i~~n~~~~~L~e~a~~~~~~~~~eg-~l~~~Gal~~~tg~~tgRsp~dk~iv~~~~~~~-i~w~~~ 81 (532)
T 1ytm_A 4 SESLAKYGITGATNIVHNPSHEELFAAETQASLEGFEKG-TVTEMGAVNVMTGVYTGRSPKDKFIVKNEASKE-IWWTSD 81 (532)
T ss_dssp HHHHHHHTCCCCSEEEESCCHHHHHHHHTCTTCCGGGCE-EECTTSSEEECCTTCCSBCGGGEEEECSGGGTT-SCCCCS
T ss_pred ccchHhcCCCCCCeEEECCCHHHHHHHHHhhccCCcccc-eecCCCCEEEcCCCcccCCCCceEEeCCCCccc-cccccc
Confidence 34678899985 799999999999999998 76 78 599999999999999999999999999999999 999
Q ss_pred --CC----CCccc--------------ccEEEEEeeecCCCCCeEEEEEechhhhHHHHHHhcCCCCChHhhccCCCCCE
Q 013022 202 --GK----MKNHD--------------VQVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDF 261 (451)
Q Consensus 202 --g~----~~e~~--------------k~lyv~D~~vG~d~~~~l~vRvite~a~~alfl~NLfirp~~eel~~fg~PDf 261 (451)
++ ++++. ++|||+|+++|+|++|++++|++++++||+||++|||+||..+|+++| +|||
T Consensus 82 ~~~~~n~~~~~e~f~~l~~~~~~~l~~k~l~v~d~~~G~d~~~~~~vr~it~~a~~~lf~~nLf~rp~~ee~~~f-~pd~ 160 (532)
T 1ytm_A 82 EFKNDNKPVTEEAWAQLKALAGKELSNKPLYVVDLFCGANENTRLKIRFVMEVAWQAHFVTNMFIRPTEEELKGF-EPDF 160 (532)
T ss_dssp SSCCSCEEECHHHHHHHHHHHHHHHSSSEEEEEEEEESSCTTTCEEEEEEESCHHHHHHHHHHSBCCCHHHHTTC-CCSE
T ss_pred ccCcccCCCCHHHHHHHHHHHHHHHcCCCEEEEEEEeeCChhhceeEEEEeCHHHHHHHHHHhccCCChHHhccC-CCCE
Confidence 65 44432 679999999999999999999999999999999999999999999999 9999
Q ss_pred EEEEcCC-CCCCcccCCCCcccEEEEeccCCeEEEEccccchhhhhHHHHHHHHhcccCCeeeeccccccCCCC-CEEEE
Q 013022 262 TIYNAGQ-FPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDG-DVALF 339 (451)
Q Consensus 262 tI~~~P~-f~~~~~~~g~~s~t~i~id~~~~~vlI~GT~YaGEmKKgifTl~n~~l~~~G~LpmH~sanvg~~G-~valf 339 (451)
+||++|+ |.++++.+|++|+++|++|+++|+++|+||+|+|||||++||+|||+++++|+||||||||++++| ++++|
T Consensus 161 ~i~~~p~~f~~~~~~~G~~s~~~v~~n~~~~~~~I~gt~Y~GemKK~~ftl~n~~~~~~G~L~~H~sanv~~~g~~~~~f 240 (532)
T 1ytm_A 161 VVLNASKAKVENFKELGLNSETAVVFNLAEKMQIILNTWYGGEMKKGMFSMMNFYLPLQGIAAMHCSANTDLEGKNTAIF 240 (532)
T ss_dssp EEEEETTCCCTTTTTTTCSSSCEEEEETTTTEEEEESCCCTTHHHHHHHHHHHHHTGGGTCEEEEEEEEEETTSCSEEEE
T ss_pred EEEECCccccCCcccCCCCCceEEEEECCCCEEEEeCCccCchhhHhHHHHHHHHHHHCCcEeecCeeeeCCCCCeEEEE
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999888 99999
Q ss_pred EecCCCCcccccccCCCceecCCceeecCCCceeccccEEEEeeCCCCCCChhHhhhccccceEeeeEEcCCCCccccCC
Q 013022 340 FGLSGTGKTTLSTDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSD 419 (451)
Q Consensus 340 fGLSGTGKTTLSad~~r~lIgDDe~~w~d~Gvfn~EgGcYaK~idLs~e~EP~I~~Ai~~gavLENVv~D~~~~~vDf~d 419 (451)
||||||||||||+|++|.||+||||+|+++||||+|+|||||||+||++.||+||+||+||+|||||++|+++ .|||+|
T Consensus 241 fGlSGtGKTTLs~d~~r~lIgDDe~~w~~~Gvfn~EgGcyak~i~Ls~~~EP~i~~ai~~~ailENV~~d~~g-~vd~~d 319 (532)
T 1ytm_A 241 FGLSGTGKTTLSTDPKRLLIGDDEHGWDDDGVFNFEGGCYAKVINLSKENEPDIWGAIKRNALLENVTVDANG-KVDFAD 319 (532)
T ss_dssp ECCTTSSHHHHHCCTTEEEEESSEEEECSSCEEESCSEEEEECTTCCTTTCHHHHHHCSTTCEEESCEECTTC-CEETTC
T ss_pred EecCCCCHHHHhhCcCCCEEECCeeeeccCCceeccceEEEEeccCCCccChhHHHhcCcCceeeeeEECCCC-ccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987 999999
Q ss_pred CCccCcceeEeeccCccccc
Q 013022 420 KSVTGKIIFCADLFHILIIF 439 (451)
Q Consensus 420 ~s~TeNtR~~yPi~~I~~~~ 439 (451)
.++|+|||++|||++||++.
T Consensus 320 ~s~t~NtR~~~P~~~i~n~~ 339 (532)
T 1ytm_A 320 KSVTENTRVSYPIFHIKNIV 339 (532)
T ss_dssp CSSCSCCEEEEEGGGSSSBC
T ss_pred CcccccceEEEEHHHCCCcc
Confidence 99999999999999999997
No 4
>1j3b_A ATP-dependent phosphoenolpyruvate carboxykinase; adenosine triphosphate, T thermophilus; 2.00A {Thermus thermophilus} SCOP: c.91.1.1 c.109.1.1 PDB: 1xkv_A* 2pc9_A*
Probab=100.00 E-value=8e-87 Score=702.59 Aligned_cols=306 Identities=42% Similarity=0.719 Sum_probs=289.1
Q ss_pred cccccCccc-ceeEecCCHHHHHHHHHHhcCCcEEecccceEeecCCcccCCCCCeeeecCCCcccccccCC----CCcc
Q 013022 133 SVSDSSLKF-THVLYNLSPAELYEQAIKYEQGSFIASSGALATLSGAKTGRSPRDKRVVKDETTEHELWWGK----MKNH 207 (451)
Q Consensus 133 ~l~~~gl~~-~~v~~Nls~~eLye~A~~~~eGt~lt~~GAL~v~TG~~TGRSpkDK~IV~d~~t~~~v~Wg~----~~e~ 207 (451)
.|+.+||.. .+|+||++.++|||+|+++++|. +++.|+|++.||++|||||+|||||+++.+++.+|||+ ++++
T Consensus 3 ~~~~~~l~~~~~v~~n~~~~~l~e~a~~~g~g~-~~~~g~~~~~tg~~tgRsp~~~fIv~~~~~~~~~~w~~~n~~~~~e 81 (529)
T 1j3b_A 3 RLEALGIHPKKRVFWNTVSPVLVEHTLLRGEGL-LAHHGPLVVDTTPYTGRSPKDKFVVREPEVEGEIWWGEVNQPFAPE 81 (529)
T ss_dssp CCGGGTCCCSSCEEESCCHHHHHHHHHHTTSCE-ECTTSCEEECCTTCCSCCGGGEEEECCTTTTTTSCBTTTBEEECHH
T ss_pred chhhccCCCCCeEEECCChHHHHHHHHHcCCCE-ECCCCCEEeCCCCcccCCCCceEEeCCCCcCCccccccccCcCCHH
Confidence 477888884 79999999999999999999995 89999999999999999999999999999999999988 3333
Q ss_pred c--------------ccEEEEEeeecCCCCCeEEEEEechhhhHHHHHHhcCCCCC----hHhhccCCCCCEEEEEcCCC
Q 013022 208 D--------------VQVFVNDQFLNWDPQNRVKVRIVSARAYHSLFMHNMCIRPT----PEELENFGTPDFTIYNAGQF 269 (451)
Q Consensus 208 ~--------------k~lyv~D~~vG~d~~~~l~vRvite~a~~alfl~NLfirp~----~eel~~fg~PDftI~~~P~f 269 (451)
. ++|||+|+++|++++|++++|++|+++||+|||+|||+||. .+|+++| +|||+||++|+|
T Consensus 82 ~f~~l~~~~~~~m~gr~lyV~~~~~G~~~~~~~~~~~itd~a~~~lf~~~m~~rp~~~~~~~el~~~-~pd~~i~~~p~f 160 (529)
T 1j3b_A 82 AFEALYQRVVQYLSERDLYVQDLYAGADRRYRLAVRVVTESPWHALFARNMFILPRRFGNDDEVEAF-VPGFTVVHAPYF 160 (529)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEEEEECSSTTTCEEEEEEESCHHHHHHHHHHSBCGGGGC------CC-CCSEEEEEETTC
T ss_pred HHHHHHHHHHHHhcCCcEEEEEEeeeCCcccCeeEEEEcChHHHHHHHHHHhcccCcccchhhhccC-CCCEEEEeCCCc
Confidence 1 67999999999999999999999999999999999999998 7889999 999999999999
Q ss_pred CCCcccCCCCcccEEEEeccCCeEEEEccccchhhhhHHHHHHHHhcccCCeeeeccccccCCCCCEEEEEecCCCCccc
Q 013022 270 PCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVALFFGLSGTGKTT 349 (451)
Q Consensus 270 ~~~~~~~g~~s~t~i~id~~~~~vlI~GT~YaGEmKKgifTl~n~~l~~~G~LpmH~sanvg~~G~valffGLSGTGKTT 349 (451)
.++++.+|++|+++|++|+++|+++|+||+|+|||||++||+||++++++|+||||||+|++++|++++|||||||||||
T Consensus 161 ~~~~~~~G~~s~~~i~~~~~~~~i~i~Gt~Y~Ge~KK~~l~i~~~~~~~~G~L~~H~sa~~~~~g~~~~ffGlSGtGKTt 240 (529)
T 1j3b_A 161 QAVPERDGTRSEVFVGISFQRRLVLIVGTKYAGEIKKSIFTVMNYLMPKRGVFPMHASANVGKEGDVAVFFGLSGTGKTT 240 (529)
T ss_dssp CCCHHHHCCSSSCEEEEETTTTEEEEESCCCTHHHHHHHHHHHHHHGGGGTCEEEECEEEECTTCCEEEEEECTTSCHHH
T ss_pred ccCcccCCCCCceEEEEECccCEEEEeCCccCcchHHHHHHHHHHHHHHCCeEeccceeeeCCCCcEEEEEccccCChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCceecCCceeecCCCceeccccEEEEeeCCCCCCChhHhhhc-cccceEeeeEEcCCCCccccCCCCccCccee
Q 013022 350 LSTDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGAVLENVVFDEHTREVDYSDKSVTGKIIF 428 (451)
Q Consensus 350 LSad~~r~lIgDDe~~w~d~Gvfn~EgGcYaK~idLs~e~EP~I~~Ai-~~gavLENVv~D~~~~~vDf~d~s~TeNtR~ 428 (451)
||++|+|.+||||+|+|+++|+||+|+|||+||++|+++.||+||+|| ++++|+|||++|++++.|||+|.++|+|+|+
T Consensus 241 Ls~~p~r~lIgDD~~~w~~~Gv~n~E~G~y~k~~~ls~~~eP~i~~ai~~~~~ileNV~~d~dg~~v~~~~~~~t~N~R~ 320 (529)
T 1j3b_A 241 LSTDPERPLIGDDEHGWSEDGVFNFEGGCYAKVIRLSPEHEPLIYKASNQFEAILENVVVNPESRRVQWDDDSKTENTRS 320 (529)
T ss_dssp HTCBTTBCEEESSEEEECSSCEEESCSEEEEECTTCCTTTCHHHHHHHSSTTCEEESCEECTTTCCEETTCCSSCSCCEE
T ss_pred HhhccCcceEECchhhhccCceecccCceEEEecCCCCcchHHHHHHhCcCCceeEEeEECCCCCcccCCCCCCCCCccE
Confidence 999999999999999999999999999999999999999999999999 9999999999999888999999999999999
Q ss_pred EeeccCcccccc
Q 013022 429 CADLFHILIIFD 440 (451)
Q Consensus 429 ~yPi~~I~~~~~ 440 (451)
+||+++||++.+
T Consensus 321 ~~P~~~~pn~~~ 332 (529)
T 1j3b_A 321 SYPIAHLENVVE 332 (529)
T ss_dssp EEEGGGCSSBCT
T ss_pred EEEHHHCCCCCC
Confidence 999999999876
No 5
>2faf_A Phosphoenolpyruvate carboxykinase; pepck, phosphoryl transfer, lyase; HET: 20S EPE 1PE; 1.70A {Gallus gallus} PDB: 2fah_A* 2qzy_A*
Probab=99.88 E-value=1.7e-21 Score=205.98 Aligned_cols=290 Identities=20% Similarity=0.238 Sum_probs=220.2
Q ss_pred ccceeEecC-CHHH---HHHHHHHhcCCcEEecc----cceEeecC-CcccCCCCCeeeecCCCccc--cc---------
Q 013022 140 KFTHVLYNL-SPAE---LYEQAIKYEQGSFIASS----GALATLSG-AKTGRSPRDKRVVKDETTEH--EL--------- 199 (451)
Q Consensus 140 ~~~~v~~Nl-s~~e---Lye~A~~~~eGt~lt~~----GAL~v~TG-~~TGRSpkDK~IV~d~~t~~--~v--------- 199 (451)
.+..|++.. |.+| |.++++. .|+ +... +...+.|. .=++|.-..+||+-....+. ..
T Consensus 24 ~Pd~I~icdGS~eE~~~l~~~~v~--~G~-~~~L~k~~n~~l~~sdp~DvARve~rTfI~t~~~~dagp~n~~~g~~~~~ 100 (608)
T 2faf_A 24 RPREVLLCDGSEEEGKELLRGLQD--DGV-LHPLPKYDNCWLARTDPRDVARVESKTVLVTPEQSDAVPPPPPSGGPPQL 100 (608)
T ss_dssp CCSEEEECCCCHHHHHHHHHHHHH--TTS-EEECTTSBSCEEECCCTTCSSCCGGGEEEECSSGGGTSCCCCTTCCCCCS
T ss_pred CCCEEEEcCCCHHHHHHHHHHHHh--CCC-eeecCCCCCceeccCChhhcceeccceEEecCchhhcCCCCccccccccc
Confidence 477898855 4444 5556665 454 3332 44444454 55778888889987654332 12
Q ss_pred -ccCCCCccc---------------ccEEEEEeeecC-CCCCeEEEEEechhhhHHHHHHhcCCCCChHhhccCCCCCEE
Q 013022 200 -WWGKMKNHD---------------VQVFVNDQFLNW-DPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFT 262 (451)
Q Consensus 200 -~Wg~~~e~~---------------k~lyv~D~~vG~-d~~~~l~vRvite~a~~alfl~NLfirp~~eel~~fg~PDft 262 (451)
.| |+++. +.|||++=-.|. ...+......+|+.+|..+.|+-|. |-..+.++..++ +|+
T Consensus 101 ~nw--~~p~e~~~~l~~~f~G~M~GRTMYViPFsMGP~gsp~s~~GVeiTDS~YVv~smriMt-R~g~~v~~~lg~-~Fv 176 (608)
T 2faf_A 101 GNW--MSPNAFQAAVQERFPGCMAGRPLYVIPFSMGPPTSPLAKLGVQVTDSPYVVLSMRIMT-RVGPAVLQRLDD-DFV 176 (608)
T ss_dssp CCE--ECHHHHHHHHHHHSTTTTTTSEEEEEEEEESCTTCTTCEEEEEEESCHHHHHHHHHHS-EESHHHHTTCCS-CCE
T ss_pred ccc--CCHHHHHHHHHHhCCcccCCCEEEEEeeecCCCCCCcccceeEeeCCHHHHHHHHHHH-hcCHHHHHHhhC-ccc
Confidence 36 33321 789999888887 7888899999999999999988664 556677766656 775
Q ss_pred -EEEcCC------------CCCCcccCCCCcccEEEEeccCCeEEEEccccchh---hhhH-HHHHHHHhcccCCeeeec
Q 013022 263 -IYNAGQ------------FPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGE---MKKG-LFSVMHYLMPKRQILSLH 325 (451)
Q Consensus 263 -I~~~P~------------f~~~~~~~g~~s~t~i~id~~~~~vlI~GT~YaGE---mKKg-ifTl~n~~l~~~G~LpmH 325 (451)
.+|+-. |+||+ ....|+.+++.+.++..|+.|.|+ -||. .|+++.+++.++|+|+.|
T Consensus 177 ~~vHSvG~pl~~~~~~~~~WPcn~------~~~~I~h~pe~r~I~S~GSgYGGNaLLGKKcfALRiAs~~ar~EGWLAEH 250 (608)
T 2faf_A 177 RCLHSVGRPLPLTEPLVSSWPCDP------SRVLVAHIPSERRIVSFGSGYGGNSLLGKKCFALRIASRMAQQQGWLAEH 250 (608)
T ss_dssp EEEEECSCCSSCSSCCSTTCCCCG------GGCEEEEEGGGTEEEEESCCSHHHHCTCCCCCTTHHHHHHHHHHTCEEES
T ss_pred eeecccCCcCCcccccCCCCccCC------CccEEEEECCCCeEEEecCCcCcchhhhhHHHHHHHHHHHhhhcChHHHH
Confidence 444333 33332 237899999999999999999999 5654 589999999999999999
Q ss_pred ccc-cc-CCCCCEEEEE--ecCCCCcccccc-c---CCC--ceecCCcee--ecCCCc-e--eccccEEEEeeCCCCCCC
Q 013022 326 SGC-NM-GKDGDVALFF--GLSGTGKTTLST-D---HNR--YLIGDDEHC--WGDNGV-S--NIEGGCYAKCIDLSREKE 390 (451)
Q Consensus 326 ~sa-nv-g~~G~valff--GLSGTGKTTLSa-d---~~r--~lIgDDe~~--w~d~Gv-f--n~EgGcYaK~idLs~e~E 390 (451)
+-. .+ +.+|++..|. ++||||||+|++ . ++- ..||||+.- ++.+|. + |-|.|+|.++.+++.+..
T Consensus 251 MlIlgvt~p~g~~~yiaaAfPSacGKTnlAMl~p~~~gwkve~vGDDIawm~~~~dG~l~AiNPE~GfFGvapGt~~~tn 330 (608)
T 2faf_A 251 MLILGVTSPSGEKRYMAAAFPSACGKTNLAMMTPSLPGWRIHCVGDDIAWMKFDDEGRLRAINPERGFFGVAPGTSSRTN 330 (608)
T ss_dssp CEEEEEECTTSCEEEEEEECSSCTTSCCGGGCCCSSTTCEEEEEESSCEEEEECTTSBEEEECCCSEEEEECTTCCTTTC
T ss_pred HHHheecCCCCcEEEEEEecccccchhhHhhcCCCCCCceeEEeecceeeeEECCCCcEEEecCCCCeeEecCCCCCCcC
Confidence 973 22 5678774444 599999999998 2 333 489999874 447884 4 569999999999999999
Q ss_pred hhHhhhccccceEeeeEEcCCCCccccCCCCcc-------------------------CcceeEeeccCcccccccee
Q 013022 391 PDIWNAIKFGAVLENVVFDEHTREVDYSDKSVT-------------------------GKIIFCADLFHILIIFDCIK 443 (451)
Q Consensus 391 P~I~~Ai~~gavLENVv~D~~~~~vDf~d~s~T-------------------------eNtR~~yPi~~I~~~~~~~~ 443 (451)
|.++++++..+|++||.++++ +.|.|.+...+ .|.|++-|+...|++...++
T Consensus 331 P~am~tl~~n~IFTNVa~t~d-G~v~WeG~~~~~~p~~~~~dw~G~~w~~~~g~paaHpNsRft~p~~qcp~id~~we 407 (608)
T 2faf_A 331 PNAMATIARNTIFTNVGLRSD-GGVYWDGLDEPTEPGVTYTSWLGKPWKHGDPEPCAHPNSRFCAPADQCPIMDPRWD 407 (608)
T ss_dssp HHHHHHTSBSCEEESCEEETT-SCEECTTCCCCCCTTCCEECTTSSEECTTCSSCSSCTTCEEEEEGGGCTTBCTTTT
T ss_pred HHHHHHhccCceeeeeEEcCC-CceecCCCCCCCCCCccccccCCCccCCCCCCcCcCCccceEeEHhhCCccCcccc
Confidence 999999988999999999885 58899988865 79999999999999987654
No 6
>2zci_A Phosphoenolpyruvate carboxykinase [GTP], phosphoenolpyruvate; GTP-dependent, signaling protein, lyase; 2.30A {Corynebacterium glutamicum}
Probab=99.87 E-value=3.2e-21 Score=204.12 Aligned_cols=297 Identities=15% Similarity=0.189 Sum_probs=222.4
Q ss_pred ccceeEecC-CHHH---HHHHHHHhcCCcEEecc------cceEeecC-CcccCCCCCeeeecCCCccc--ccccCCCCc
Q 013022 140 KFTHVLYNL-SPAE---LYEQAIKYEQGSFIASS------GALATLSG-AKTGRSPRDKRVVKDETTEH--ELWWGKMKN 206 (451)
Q Consensus 140 ~~~~v~~Nl-s~~e---Lye~A~~~~eGt~lt~~------GAL~v~TG-~~TGRSpkDK~IV~d~~t~~--~v~Wg~~~e 206 (451)
.+..|++.. |.+| |.++++. .|+ +... +...+.|. .=+.|.-..+||+-....+. ...| |++
T Consensus 32 ~Pd~I~icdGS~eE~~~l~~~~v~--~G~-~~~L~~~k~~n~~l~~sdp~DvARve~rTfI~t~~~~dagptnnw--~~p 106 (610)
T 2zci_A 32 QPEAVVFVDGSQAEWDRMAEDLVE--AGT-LIKLNEEKRPNSYLARSNPSDVARVESRTFICSEKEEDAGPTNNW--APP 106 (610)
T ss_dssp CCSEEEECCCCHHHHHHHHHHHHH--TTS-EEECCTTTSTTCEEECCCGGGSSCCGGGEEECCSSTTTTCTTSCC--CCH
T ss_pred CCCEEEEcCCCHHHHHHHHHHHHh--CCC-eeecCCCCCCceeecCCChhhcceeccceEEecCchhhcCCCcCc--cCH
Confidence 478998865 4444 5566665 465 4433 55666665 55788888889987644332 2346 443
Q ss_pred cc---------------ccEEEEEeeecC-CCCCeEEEEEechhhhHHHHHHhcCCCCChHhhccCCC-CCEE-EEEcCC
Q 013022 207 HD---------------VQVFVNDQFLNW-DPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGT-PDFT-IYNAGQ 268 (451)
Q Consensus 207 ~~---------------k~lyv~D~~vG~-d~~~~l~vRvite~a~~alfl~NLfirp~~eel~~fg~-PDft-I~~~P~ 268 (451)
+. +.|||++=-.|. ...+......+|+.+|..+.|+-|. |-..+.++..++ .+|+ .+|+-.
T Consensus 107 ~e~~~~l~~~f~G~M~GRTMYViPfsMGP~gsp~s~~GVeiTDS~YVv~smrIMt-R~g~~v~~~lg~~~~Fv~~vHSvG 185 (610)
T 2zci_A 107 QAMKDEMSKHYAGSMKGRTMYVVPFCMGPISDPDPKLGVQLTDSEYVVMSMRIMT-RMGIEALDKIGANGSFVRCLHSVG 185 (610)
T ss_dssp HHHHHHHHHHHTTTTTTSEEEEEEEEESCTTCSSCEEEEEEESCHHHHHHHHHHS-EESHHHHHHHTTTCCCEEEEEECS
T ss_pred HHHHHHHHHhCCcccCCCEEEEEeeecCCCCCCcccceeEeeCCHHHHHHHHHHH-hcCHHHHHHhCCCCCeeeeecccC
Confidence 21 789999888887 7888899999999999999988765 545555543332 4665 455433
Q ss_pred CCCCc-cc---CCCCcccEEEEeccCCeEEEEccccchh---hhhH-HHHHHHHhcccCCeeeecccc-cc-CCCCCEEE
Q 013022 269 FPCNR-YT---HYMTSSTSIDLNLARREMVILGTQYAGE---MKKG-LFSVMHYLMPKRQILSLHSGC-NM-GKDGDVAL 338 (451)
Q Consensus 269 f~~~~-~~---~g~~s~t~i~id~~~~~vlI~GT~YaGE---mKKg-ifTl~n~~l~~~G~LpmH~sa-nv-g~~G~val 338 (451)
-+..+ .. -.++.+..|+.+++.+.++..|+.|.|+ -||. .|+++.+++.++|+|+.|+-. .+ +.+|++..
T Consensus 186 ~pl~~~~~dv~wPc~~~~~I~h~pe~r~I~S~GSgYGGNaLLGKKcfALRiAs~~ar~EGWLAEHMlIlgvt~P~g~~~y 265 (610)
T 2zci_A 186 APLEPGQEDVAWPCNDTKYITQFPETKEIWSYGSGYGGNAILAKKCYALRIASVMAREEGWMAEHMLILKLINPEGKAYH 265 (610)
T ss_dssp CCCCSSCCCCSSCCCSSCEEEEETTTTEEEEESCCSHHHHCTCCCCCTTHHHHHHHHHHTCEEECCEEEEEECSSSCEEE
T ss_pred CcCCCCCcCCCCCCCCceEEEEecCcCeEEEecCCcCcchhhhhHHHHHHHHHHHhhhcChHHHHHHHheecCCCCcEEE
Confidence 22111 01 1233568999999999999999999999 5655 589999999999999999973 22 57787744
Q ss_pred EE--ecCCCCcccccc-c---CCC--ceecCCcee--ecCCCce--eccccEEEEeeCCCCCCChhHhhhc-cccceEee
Q 013022 339 FF--GLSGTGKTTLST-D---HNR--YLIGDDEHC--WGDNGVS--NIEGGCYAKCIDLSREKEPDIWNAI-KFGAVLEN 405 (451)
Q Consensus 339 ff--GLSGTGKTTLSa-d---~~r--~lIgDDe~~--w~d~Gvf--n~EgGcYaK~idLs~e~EP~I~~Ai-~~gavLEN 405 (451)
|. ++||||||+|++ . ++- ..||||+.- ++.+|++ |-|.|+|.++.+++.+..|.+++++ +..+|++|
T Consensus 266 vaaAfPSacGKTnlAMl~p~~~gwkve~vGDDIawm~~~~dGl~AiNPE~GfFGvapGt~~~tnP~am~~~~~~n~IFtN 345 (610)
T 2zci_A 266 IAAAFPSACGKTNLAMITPTIPGWTAQVVGDDIAWLKLREDGLYAVNPENGFFGVAPGTNYASNPIAMKTMEPGNTLFTN 345 (610)
T ss_dssp EEEECSSSHHHHHHHTCCCSSTTCEEEEEESSCEEEEECSSSEEEECCCSEEEEECTTCCTTTCHHHHHHHTTCCCEEES
T ss_pred EEEecccccchhhHhhcCCCCCCceeEEeecceeeEeeCCCceeEecCCCceeEecCCCCCCcCHHHHHHhccCCceEee
Confidence 44 599999999998 2 333 489999874 4468866 4599999999999999999999999 88999999
Q ss_pred eEEcCCCCccccCCCCcc-----------------------CcceeEeeccCcccccccee
Q 013022 406 VVFDEHTREVDYSDKSVT-----------------------GKIIFCADLFHILIIFDCIK 443 (451)
Q Consensus 406 Vv~D~~~~~vDf~d~s~T-----------------------eNtR~~yPi~~I~~~~~~~~ 443 (451)
|.++++ +.|.|.+...+ .|.|++-|+...|++...++
T Consensus 346 Va~t~d-G~v~WeG~~~~~p~~~~dw~G~~w~~~~~~paaHpNsRft~p~~qcp~i~~~we 405 (610)
T 2zci_A 346 VALTDD-GDIWWEGMDGDAPAHLIDWMGNDWTPESDENAAHPNSRYCVAIDQSPAAAPEFN 405 (610)
T ss_dssp CEEETT-SCEECTTCSSCCCSCEECTTSCEECTTCSSCSSCTTCEEEEEGGGCTTBCGGGG
T ss_pred eEEcCC-CcccCCCCCCCCCCcccccCCCccCCCCCCcCcCCccceEeEHhhCCccCcccc
Confidence 999885 58899988874 89999999999999988765
No 7
>3moe_A Phosphoenolpyruvate carboxykinase, cytosolic [GTP; gluconeogenesis, lyase; HET: GTP SPV 1PE; 1.25A {Rattus norvegicus} PDB: 3mof_A* 3moh_A* 3dtb_A* 2qey_A* 2qf1_A* 2qew_A* 2rk7_A 2rk8_A 2rka_A* 2rkd_A 2rke_A 2qf2_A* 3dt2_A* 3dt7_A* 3dt4_A* 1khb_A* 1khe_A* 1khf_A* 1khg_A 1m51_A* ...
Probab=99.79 E-value=4.9e-18 Score=179.93 Aligned_cols=289 Identities=20% Similarity=0.229 Sum_probs=212.8
Q ss_pred ccceeEecC-CH---HHHHHHHHHhcCCcEEecc----cceEeecC-CcccCCCCCeeeecCCCccc----------ccc
Q 013022 140 KFTHVLYNL-SP---AELYEQAIKYEQGSFIASS----GALATLSG-AKTGRSPRDKRVVKDETTEH----------ELW 200 (451)
Q Consensus 140 ~~~~v~~Nl-s~---~eLye~A~~~~eGt~lt~~----GAL~v~TG-~~TGRSpkDK~IV~d~~t~~----------~v~ 200 (451)
++..|++.. |. +.|.++++.. |+ +... +..++.|. .=+.|.-..+||+-....+. ...
T Consensus 41 ~Pd~I~icdGS~eE~~~l~~~~ve~--G~-~~~L~k~pn~~l~~sdP~DvARve~rTfI~t~~~~da~p~~~~g~~~~nn 117 (624)
T 3moe_A 41 QPEYIHICDGSEEEYGRLLAHMQEE--GV-IRKLKKYDNCWLALTDPRDVARIESKTVIITQEQRDTVPIPKSGQSQLGR 117 (624)
T ss_dssp CCSEEEECCCCHHHHHHHHHHHHHT--TS-CEECTTSBSCEEECCCTTCCSCCGGGEEEECSSHHHHSCCCSSSCCSSCC
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHc--CC-cccccCCCCCEEEeCChhhccccccceEEecCchhhcCCcccCCcCcccc
Confidence 478999865 55 4566667654 54 3222 43344443 35677777778886544331 235
Q ss_pred cCCCCccc---------------ccEEEEEeeecC-CCCCeEEEEEechhhhHHHHHHhcCCCCChHhhccCCCCCEE-E
Q 013022 201 WGKMKNHD---------------VQVFVNDQFLNW-DPQNRVKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFT-I 263 (451)
Q Consensus 201 Wg~~~e~~---------------k~lyv~D~~vG~-d~~~~l~vRvite~a~~alfl~NLfirp~~eel~~fg~PDft-I 263 (451)
| |+++. +.|||++=-.|. ...+......+|+.+|..+.|+-|. |-..+.++..++.+|+ .
T Consensus 118 w--m~p~e~~~~l~~~f~G~M~GRTMYViPFsMGP~GSp~s~~GVeiTDS~YVv~smrIMt-R~g~~vld~lg~~~Fv~c 194 (624)
T 3moe_A 118 W--MSEEDFEKAFNARFPGCMKGRTMYVIPFSMGPLGSPLAKIGIELTDSPYVVASMRIMT-RMGTSVLEALGDGEFIKC 194 (624)
T ss_dssp E--ECHHHHHHHHHTTSTTTTTTSEEEEEEEEESCSSCTTCEEEEEEESCHHHHHHHHHHS-EESHHHHHHHTTCCCEEE
T ss_pred c--CCHHHHHHHHHhhCcccccCCeEEEEeeecCCCCCCccceeEEccCcHHHHHhHHHHh-hCCHHHHHhhcCCCeeee
Confidence 6 43321 789999888887 7778888999999999999988664 5555555443444775 4
Q ss_pred EEcCC------------CCCCcccCCCCcccEEEEeccCCeEEEEccccchh---hhhH-HHHHHHHhcccCCeeeeccc
Q 013022 264 YNAGQ------------FPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGE---MKKG-LFSVMHYLMPKRQILSLHSG 327 (451)
Q Consensus 264 ~~~P~------------f~~~~~~~g~~s~t~i~id~~~~~vlI~GT~YaGE---mKKg-ifTl~n~~l~~~G~LpmH~s 327 (451)
+|+-+ |+|+| ..+.|+.+++.+.++..|+.|.|+ -||. .|+++.+++.++|+|+.|+-
T Consensus 195 lHSvG~pl~~~~~~v~~Wpcnp------~k~~I~h~pe~r~I~S~GSgYGGNaLLGKKcfALRiAS~~Ar~EGWLAEHMl 268 (624)
T 3moe_A 195 LHSVGCPLPLKKPLVNNWACNP------ELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRLAKEEGWLAEHML 268 (624)
T ss_dssp EEECSCCSSCSSCCBTTBCCCG------GGCEEEEEGGGTEEEEESCCSHHHHCTCCCCCTTHHHHHHHHHHTCEEESCE
T ss_pred ecccCCCCCCCCccCCCCCCCC------CceEEEEecccCeEEEecCCcCcchhhhHHHHHHHHHHHHhhhcccHHHhHH
Confidence 44332 33332 236899999999999999999999 7888 99999999999999999998
Q ss_pred c-cc-CCCCCEEEEEe--cCCCCccccccc-C---CC--ceecCCcee--ecCCCce---eccccEEEEeeCCCCCCChh
Q 013022 328 C-NM-GKDGDVALFFG--LSGTGKTTLSTD-H---NR--YLIGDDEHC--WGDNGVS---NIEGGCYAKCIDLSREKEPD 392 (451)
Q Consensus 328 a-nv-g~~G~valffG--LSGTGKTTLSad-~---~r--~lIgDDe~~--w~d~Gvf---n~EgGcYaK~idLs~e~EP~ 392 (451)
. .+ +++|++..|.| +|+||||+|++- | +- ..||||+.- |+++|.+ |-|.|+|..+-+.+.+..|.
T Consensus 269 Ilgit~P~G~~~yiaaAFPSaCGKTnlAMl~p~~~Gwkve~vGDDIAwm~~~~dG~l~AiNPE~GfFGvapGt~~~tnp~ 348 (624)
T 3moe_A 269 ILGITNPEGKKKYLAAAFPSACGKTNLAMMNPTLPGWKVECVGDDIAWMKFDAQGNLRAINPENGFFGVAPGTSVKTNPN 348 (624)
T ss_dssp EEEEECTTSCEEEEEEECCTTSSHHHHHTCCCSSTTCEEEEEESSCEEEEECTTSBEEEECCCSEEEEECTTCSTTTCHH
T ss_pred HheecCCCCcEEEEEEEcccccccccHhhcCCCCCCceeEEecccEEEEEECCCccEEeecCCCCeeeecCCCCCccCHH
Confidence 3 22 57888866655 999999999982 3 43 579999863 3678853 78999999999999999999
Q ss_pred HhhhccccceEeeeEEcCCCCc----------------cccCCCCcc---------CcceeEeeccCccccccc
Q 013022 393 IWNAIKFGAVLENVVFDEHTRE----------------VDYSDKSVT---------GKIIFCADLFHILIIFDC 441 (451)
Q Consensus 393 I~~Ai~~gavLENVv~D~~~~~----------------vDf~d~s~T---------eNtR~~yPi~~I~~~~~~ 441 (451)
++++++..+|+.||.+.++ +. .||....-| .|.|.+-|+...||+...
T Consensus 349 am~~l~~n~IFTNVa~t~d-G~v~WeG~~~~~p~~~~~~dw~G~~w~~~~~~p~aHPNsRft~p~~qcp~~~p~ 421 (624)
T 3moe_A 349 AIKTIQKNTIFTNVAETSD-GGVYWEGIDEPLAPGVTITSWKNKEWRPQDEEPCAHPNSRFCTPASQCPIIDPA 421 (624)
T ss_dssp HHHHTTBSCEEESCEEETT-SCEECTTCCCCCCTTCCEECTTSSEECTTSSSCSSCTTCEEEEEGGGCTTBCTT
T ss_pred HHHhhcCCceEeeeEECCC-CCeecCCCCCCCCCCcceeeCCCCCCCCCCCCcCCCCcccccccHhhCCCCCcc
Confidence 9999998999999999765 33 333333333 799999999999998653
No 8
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii}
Probab=97.87 E-value=4.1e-06 Score=78.15 Aligned_cols=46 Identities=26% Similarity=0.235 Sum_probs=39.4
Q ss_pred eeeeccccccCCCCCEEEEEecCCCCcccccc---cCCCceecCCceeec
Q 013022 321 ILSLHSGCNMGKDGDVALFFGLSGTGKTTLST---DHNRYLIGDDEHCWG 367 (451)
Q Consensus 321 ~LpmH~sanvg~~G~valffGLSGTGKTTLSa---d~~r~lIgDDe~~w~ 367 (451)
.+.+||+| +..+|..++|.|.||+|||||+. ..+..||+||.....
T Consensus 4 ~~~lHas~-v~v~G~gvli~G~SGaGKStlal~L~~rG~~lvaDD~v~i~ 52 (181)
T 3tqf_A 4 KQTWHANF-LVIDKMGVLITGEANIGKSELSLALIDRGHQLVCDDVIDLK 52 (181)
T ss_dssp CEEEESEE-EEETTEEEEEEESSSSSHHHHHHHHHHTTCEEEESSEEEEE
T ss_pred cEEEEEEE-EEECCEEEEEEcCCCCCHHHHHHHHHHcCCeEecCCEEEEE
Confidence 36899998 88899999999999999999876 457789999987544
No 9
>1knx_A Probable HPR(Ser) kinase/phosphatase; HPR kinase, HPR kinase/phosphatase, HPRK/P, P-loop, walker A BOX, catabolite repression; 2.50A {Mycoplasma pneumoniae} SCOP: c.98.2.1 c.91.1.2
Probab=97.70 E-value=1.1e-05 Score=80.53 Aligned_cols=47 Identities=26% Similarity=0.328 Sum_probs=40.0
Q ss_pred CeeeeccccccCCCCCEEEEEecCCCCcccccc---cCCCceecCCceeec
Q 013022 320 QILSLHSGCNMGKDGDVALFFGLSGTGKTTLST---DHNRYLIGDDEHCWG 367 (451)
Q Consensus 320 G~LpmH~sanvg~~G~valffGLSGTGKTTLSa---d~~r~lIgDDe~~w~ 367 (451)
..+++||++ +..+|..++|.|.||+|||||+. ..+..||+||.+...
T Consensus 134 ~~~~~H~~~-v~~~g~gvli~G~sG~GKStlal~l~~~G~~lv~DD~v~i~ 183 (312)
T 1knx_A 134 TVAQIHGVL-LEVFGVGVLLTGRSGIGKSECALDLINKNHLFVGDDAIEIY 183 (312)
T ss_dssp CCEEEEEEE-EEETTEEEEEEESSSSSHHHHHHHHHTTTCEEEEEEEEEEE
T ss_pred hcceeEEEE-EEECCEEEEEEcCCCCCHHHHHHHHHHcCCEEEeCCEEEEE
Confidence 359999997 88889999999999999999876 457789999987654
No 10
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=97.67 E-value=2e-05 Score=78.78 Aligned_cols=49 Identities=27% Similarity=0.247 Sum_probs=40.5
Q ss_pred cCCeeeeccccccCCCCCEEEEEecCCCCcccccc---cCCCceecCCceeec
Q 013022 318 KRQILSLHSGCNMGKDGDVALFFGLSGTGKTTLST---DHNRYLIGDDEHCWG 367 (451)
Q Consensus 318 ~~G~LpmH~sanvg~~G~valffGLSGTGKTTLSa---d~~r~lIgDDe~~w~ 367 (451)
....+++||++ +..+|..++|.|.||+|||||+. ..+..||+||.....
T Consensus 129 ~~~~~~~H~~~-v~~~g~~vl~~G~sG~GKSt~a~~l~~~g~~lv~dD~~~i~ 180 (314)
T 1ko7_A 129 LARTTSLHGVL-VDVYGVGVLITGDSGIGKSETALELIKRGHRLVADDNVEIR 180 (314)
T ss_dssp TCEEEEEESEE-EEETTEEEEEEESTTSSHHHHHHHHHHTTCEEEESSEEEEE
T ss_pred hccceeeeEEE-EEECCEEEEEEeCCCCCHHHHHHHHHhcCCceecCCeEEEE
Confidence 34579999997 66688999999999999999775 457789999987543
No 11
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A*
Probab=97.44 E-value=3.9e-05 Score=72.75 Aligned_cols=49 Identities=27% Similarity=0.207 Sum_probs=38.9
Q ss_pred cCCeeeeccccccCCCCCEEEEEecCCCCccccccc---CCCceecCCceeec
Q 013022 318 KRQILSLHSGCNMGKDGDVALFFGLSGTGKTTLSTD---HNRYLIGDDEHCWG 367 (451)
Q Consensus 318 ~~G~LpmH~sanvg~~G~valffGLSGTGKTTLSad---~~r~lIgDDe~~w~ 367 (451)
..+.+++||++ +..+|..++|.|+||+|||||+.. ....+|.||-..+-
T Consensus 19 ~a~~~~lHa~~-v~~~g~~ilI~GpsGsGKStLA~~La~~g~~iIsdDs~~v~ 70 (205)
T 2qmh_A 19 LAERRSMHGVL-VDIYGLGVLITGDSGVGKSETALELVQRGHRLIADDRVDVY 70 (205)
T ss_dssp --CCCCEESEE-EEETTEEEEEECCCTTTTHHHHHHHHTTTCEEEESSEEEEE
T ss_pred cCcceeeeEEE-EEECCEEEEEECCCCCCHHHHHHHHHHhCCeEEecchhhee
Confidence 56678999998 777888999999999999998862 23479999987554
No 12
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=95.37 E-value=0.0051 Score=54.41 Aligned_cols=20 Identities=30% Similarity=0.466 Sum_probs=17.7
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..+++.|+||||||||..
T Consensus 6 ~g~ii~l~Gp~GsGKSTl~~ 25 (205)
T 3tr0_A 6 KANLFIISAPSGAGKTSLVR 25 (205)
T ss_dssp CCCEEEEECCTTSCHHHHHH
T ss_pred CCcEEEEECcCCCCHHHHHH
Confidence 57889999999999999764
No 13
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=95.31 E-value=0.0043 Score=54.81 Aligned_cols=21 Identities=29% Similarity=0.583 Sum_probs=18.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||||||||..
T Consensus 7 ~~gei~~l~G~nGsGKSTl~~ 27 (171)
T 4gp7_A 7 PELSLVVLIGSSGSGKSTFAK 27 (171)
T ss_dssp ESSEEEEEECCTTSCHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHH
Confidence 457899999999999999875
No 14
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=95.29 E-value=0.005 Score=53.99 Aligned_cols=21 Identities=33% Similarity=0.678 Sum_probs=18.4
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||||||||..
T Consensus 7 ~~g~~i~l~G~~GsGKSTl~~ 27 (191)
T 1zp6_A 7 LGGNILLLSGHPGSGKSTIAE 27 (191)
T ss_dssp CTTEEEEEEECTTSCHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 467889999999999999764
No 15
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=95.18 E-value=0.0062 Score=54.03 Aligned_cols=20 Identities=15% Similarity=0.419 Sum_probs=17.5
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++|.|+||+|||||..
T Consensus 4 ~g~~i~i~GpsGsGKSTL~~ 23 (180)
T 1kgd_A 4 MRKTLVLLGAHGVGRRHIKN 23 (180)
T ss_dssp CCCEEEEECCTTSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 46789999999999999764
No 16
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=95.17 E-value=0.006 Score=54.79 Aligned_cols=22 Identities=45% Similarity=0.676 Sum_probs=19.2
Q ss_pred CCCCCEEEEEecCCCCcccccc
Q 013022 331 GKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 331 g~~G~valffGLSGTGKTTLSa 352 (451)
...|.+++|.|+||||||||..
T Consensus 22 ~~~g~~i~l~G~sGsGKSTl~~ 43 (200)
T 3uie_A 22 DQKGCVIWVTGLSGSGKSTLAC 43 (200)
T ss_dssp TSCCEEEEEECSTTSSHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHH
Confidence 4668899999999999999764
No 17
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=95.14 E-value=0.0067 Score=54.85 Aligned_cols=21 Identities=33% Similarity=0.460 Sum_probs=17.8
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||||||||..
T Consensus 18 ~~Gei~~l~GpnGsGKSTLl~ 38 (207)
T 1znw_A 18 AVGRVVVLSGPSAVGKSTVVR 38 (207)
T ss_dssp -CCCEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 457899999999999999764
No 18
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=95.13 E-value=0.0062 Score=52.78 Aligned_cols=19 Identities=21% Similarity=0.323 Sum_probs=16.6
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..+++.|+|||||||++.
T Consensus 3 ~~~i~l~G~~GsGKST~a~ 21 (178)
T 1qhx_A 3 TRMIILNGGSSAGKSGIVR 21 (178)
T ss_dssp CCEEEEECCTTSSHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHH
Confidence 4579999999999999875
No 19
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=94.92 E-value=0.0084 Score=52.97 Aligned_cols=20 Identities=35% Similarity=0.519 Sum_probs=17.7
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++|.|+||||||||+.
T Consensus 5 ~g~~i~l~G~~GsGKSTl~~ 24 (207)
T 2j41_A 5 KGLLIVLSGPSGVGKGTVRK 24 (207)
T ss_dssp CCCEEEEECSTTSCHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 47789999999999999765
No 20
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=94.85 E-value=0.0088 Score=54.34 Aligned_cols=21 Identities=33% Similarity=0.498 Sum_probs=18.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++|.|+||+|||||..
T Consensus 6 ~~g~~i~l~GpsGsGKsTl~~ 26 (208)
T 3tau_A 6 ERGLLIVLSGPSGVGKGTVRE 26 (208)
T ss_dssp CCCCEEEEECCTTSCHHHHHH
T ss_pred CCCcEEEEECcCCCCHHHHHH
Confidence 468899999999999999764
No 21
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=94.80 E-value=0.0078 Score=53.51 Aligned_cols=19 Identities=42% Similarity=0.508 Sum_probs=16.2
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|++++|.|+||+|||||..
T Consensus 1 ~~ii~l~GpsGaGKsTl~~ 19 (186)
T 3a00_A 1 SRPIVISGPSGTGKSTLLK 19 (186)
T ss_dssp CCCEEEESSSSSSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 4678999999999999753
No 22
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=94.79 E-value=0.0074 Score=52.04 Aligned_cols=19 Identities=26% Similarity=0.468 Sum_probs=16.6
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..+++.|+||||||||+.
T Consensus 4 ~~~i~l~G~~GsGKSTl~~ 22 (173)
T 1kag_A 4 KRNIFLVGPMGAGKSTIGR 22 (173)
T ss_dssp CCCEEEECCTTSCHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHH
Confidence 4579999999999999875
No 23
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=94.71 E-value=0.009 Score=54.06 Aligned_cols=21 Identities=33% Similarity=0.536 Sum_probs=18.4
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||+|||||..
T Consensus 20 ~~g~~v~I~G~sGsGKSTl~~ 40 (208)
T 3c8u_A 20 PGRQLVALSGAPGSGKSTLSN 40 (208)
T ss_dssp CSCEEEEEECCTTSCTHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 457889999999999999875
No 24
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=94.67 E-value=0.01 Score=55.35 Aligned_cols=21 Identities=29% Similarity=0.468 Sum_probs=18.1
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||+|||||..
T Consensus 14 ~~G~ii~l~GpsGsGKSTLlk 34 (219)
T 1s96_A 14 AQGTLYIVSAPSGAGKSSLIQ 34 (219)
T ss_dssp -CCCEEEEECCTTSCHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 568899999999999999754
No 25
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=94.66 E-value=0.0084 Score=54.29 Aligned_cols=20 Identities=35% Similarity=0.451 Sum_probs=16.2
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++|.|+||+|||||..
T Consensus 3 ~g~~i~lvGpsGaGKSTLl~ 22 (198)
T 1lvg_A 3 GPRPVVLSGPSGAGKSTLLK 22 (198)
T ss_dssp --CCEEEECCTTSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 46789999999999999764
No 26
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=94.64 E-value=0.0094 Score=54.86 Aligned_cols=21 Identities=33% Similarity=0.340 Sum_probs=18.1
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++|.|+||+|||||..
T Consensus 21 ~~G~~~~lvGpsGsGKSTLl~ 41 (218)
T 1z6g_A 21 NNIYPLVICGPSGVGKGTLIK 41 (218)
T ss_dssp -CCCCEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 568999999999999999764
No 27
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=94.49 E-value=0.012 Score=52.84 Aligned_cols=21 Identities=33% Similarity=0.601 Sum_probs=18.0
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||||||||+.
T Consensus 27 ~~g~~i~l~G~~GsGKSTl~~ 47 (200)
T 4eun_A 27 EPTRHVVVMGVSGSGKTTIAH 47 (200)
T ss_dssp -CCCEEEEECCTTSCHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 457899999999999999765
No 28
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=94.43 E-value=0.012 Score=53.97 Aligned_cols=21 Identities=33% Similarity=0.452 Sum_probs=14.2
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++|.|+||||||||..
T Consensus 25 ~~G~ii~l~Gp~GsGKSTl~~ 45 (231)
T 3lnc_A 25 SVGVILVLSSPSGCGKTTVAN 45 (231)
T ss_dssp ECCCEEEEECSCC----CHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 468899999999999999753
No 29
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=94.42 E-value=0.011 Score=51.26 Aligned_cols=20 Identities=30% Similarity=0.750 Sum_probs=17.6
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..+++.|+||+|||||+.
T Consensus 7 ~g~~i~l~G~~GsGKSTl~~ 26 (175)
T 1knq_A 7 DHHIYVLMGVSGSGKSAVAS 26 (175)
T ss_dssp TSEEEEEECSTTSCHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHH
Confidence 46789999999999999875
No 30
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=94.40 E-value=0.01 Score=53.38 Aligned_cols=20 Identities=35% Similarity=0.321 Sum_probs=17.5
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++|.|+||+|||||+.
T Consensus 11 ~~~~i~l~G~sGsGKsTl~~ 30 (204)
T 2qor_A 11 RIPPLVVCGPSGVGKGTLIK 30 (204)
T ss_dssp CCCCEEEECCTTSCHHHHHH
T ss_pred cCCEEEEECCCCCCHHHHHH
Confidence 46789999999999999765
No 31
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=94.31 E-value=0.012 Score=52.51 Aligned_cols=21 Identities=33% Similarity=0.260 Sum_probs=17.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|.++++.|.||||||||+.
T Consensus 4 ~~~~~i~i~G~~GsGKSTl~~ 24 (211)
T 3asz_A 4 PKPFVIGIAGGTASGKTTLAQ 24 (211)
T ss_dssp -CCEEEEEEESTTSSHHHHHH
T ss_pred CCcEEEEEECCCCCCHHHHHH
Confidence 456789999999999999875
No 32
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=94.27 E-value=0.015 Score=54.66 Aligned_cols=21 Identities=38% Similarity=0.722 Sum_probs=18.8
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||||||||..
T Consensus 29 ~~Ge~~~iiG~nGsGKSTLl~ 49 (235)
T 3tif_A 29 KEGEFVSIMGPSGSGKSTMLN 49 (235)
T ss_dssp CTTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCcHHHHHH
Confidence 678999999999999999754
No 33
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=94.26 E-value=0.011 Score=51.71 Aligned_cols=19 Identities=42% Similarity=0.650 Sum_probs=17.2
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|..++|+|++|||||||..
T Consensus 38 g~~~~l~G~~G~GKTtL~~ 56 (180)
T 3ec2_A 38 GKGLTFVGSPGVGKTHLAV 56 (180)
T ss_dssp CCEEEECCSSSSSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 6789999999999999874
No 34
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=94.15 E-value=0.015 Score=51.77 Aligned_cols=21 Identities=33% Similarity=0.427 Sum_probs=18.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|+++++.|++|+|||||..
T Consensus 31 ~~Ge~v~L~G~nGaGKTTLlr 51 (158)
T 1htw_A 31 EKAIMVYLNGDLGAGKTTLTR 51 (158)
T ss_dssp SSCEEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 567899999999999999765
No 35
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=94.14 E-value=0.015 Score=54.19 Aligned_cols=21 Identities=43% Similarity=0.676 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||+|||||..
T Consensus 28 ~~Ge~~~iiG~nGsGKSTLl~ 48 (224)
T 2pcj_A 28 KKGEFVSIIGASGSGKSTLLY 48 (224)
T ss_dssp ETTCEEEEEECTTSCHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 578899999999999999754
No 36
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=94.13 E-value=0.011 Score=52.07 Aligned_cols=19 Identities=26% Similarity=0.445 Sum_probs=16.2
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|..++|.|+||||||||..
T Consensus 2 g~ii~l~G~~GaGKSTl~~ 20 (189)
T 2bdt_A 2 KKLYIITGPAGVGKSTTCK 20 (189)
T ss_dssp EEEEEEECSTTSSHHHHHH
T ss_pred CeEEEEECCCCCcHHHHHH
Confidence 3568999999999999764
No 37
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=94.10 E-value=0.016 Score=51.93 Aligned_cols=21 Identities=33% Similarity=0.395 Sum_probs=18.0
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..++|.|+|||||||++.
T Consensus 23 ~~~~~i~l~G~~GsGKsTl~~ 43 (199)
T 3vaa_A 23 NAMVRIFLTGYMGAGKTTLGK 43 (199)
T ss_dssp -CCCEEEEECCTTSCHHHHHH
T ss_pred CCCCEEEEEcCCCCCHHHHHH
Confidence 457889999999999999875
No 38
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=94.09 E-value=0.015 Score=49.55 Aligned_cols=17 Identities=18% Similarity=0.192 Sum_probs=15.2
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|+|||||||++.
T Consensus 3 ~i~l~G~~GsGKsT~~~ 19 (173)
T 3kb2_A 3 LIILEGPDCCFKSTVAA 19 (173)
T ss_dssp EEEEECSSSSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 57899999999999775
No 39
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=94.09 E-value=0.015 Score=52.54 Aligned_cols=21 Identities=43% Similarity=0.697 Sum_probs=18.3
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||||||||..
T Consensus 28 ~~G~~~~l~GpnGsGKSTLl~ 48 (251)
T 2ehv_A 28 PEGTTVLLTGGTGTGKTTFAA 48 (251)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHH
Confidence 468899999999999999653
No 40
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=94.04 E-value=0.015 Score=49.07 Aligned_cols=17 Identities=35% Similarity=0.739 Sum_probs=15.3
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|++||||||++.
T Consensus 3 ~I~l~G~~GsGKsT~a~ 19 (179)
T 3lw7_A 3 VILITGMPGSGKSEFAK 19 (179)
T ss_dssp EEEEECCTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58899999999999775
No 41
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=93.94 E-value=0.017 Score=50.06 Aligned_cols=19 Identities=37% Similarity=0.550 Sum_probs=16.7
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|..++|.|++||||||++.
T Consensus 3 ~~~I~i~G~~GsGKsT~~~ 21 (192)
T 1kht_A 3 NKVVVVTGVPGVGSTTSSQ 21 (192)
T ss_dssp CCEEEEECCTTSCHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4579999999999999775
No 42
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=93.91 E-value=0.016 Score=51.82 Aligned_cols=21 Identities=33% Similarity=0.542 Sum_probs=18.1
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||||||||..
T Consensus 23 ~~G~~~~l~G~nGsGKSTll~ 43 (231)
T 4a74_A 23 ETQAITEVFGEFGSGKTQLAH 43 (231)
T ss_dssp ESSEEEEEEESTTSSHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 457889999999999999764
No 43
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=93.89 E-value=0.019 Score=54.82 Aligned_cols=21 Identities=43% Similarity=0.707 Sum_probs=18.8
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||||||||..
T Consensus 30 ~~Ge~~~liG~nGsGKSTLlk 50 (262)
T 1b0u_A 30 RAGDVISIIGSSGSGKSTFLR 50 (262)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999764
No 44
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=93.89 E-value=0.016 Score=50.62 Aligned_cols=21 Identities=48% Similarity=0.621 Sum_probs=17.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..++|.|++||||||++.
T Consensus 3 ~~g~~i~l~G~~GsGKST~~~ 23 (179)
T 2pez_A 3 MRGCTVWLTGLSGAGKTTVSM 23 (179)
T ss_dssp -CCEEEEEECCTTSSHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 356789999999999999765
No 45
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=93.82 E-value=0.019 Score=50.09 Aligned_cols=19 Identities=42% Similarity=0.508 Sum_probs=16.6
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|.|++||||||++.
T Consensus 5 ~~~I~l~G~~GsGKST~~~ 23 (193)
T 2rhm_A 5 PALIIVTGHPATGKTTLSQ 23 (193)
T ss_dssp CEEEEEEESTTSSHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4579999999999999775
No 46
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=93.74 E-value=0.02 Score=50.01 Aligned_cols=19 Identities=32% Similarity=0.518 Sum_probs=16.8
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|.|+|||||||++.
T Consensus 5 ~~~i~l~G~~GsGKst~a~ 23 (185)
T 3trf_A 5 LTNIYLIGLMGAGKTSVGS 23 (185)
T ss_dssp CCEEEEECSTTSSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 4679999999999999875
No 47
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=93.71 E-value=0.018 Score=49.38 Aligned_cols=17 Identities=35% Similarity=0.642 Sum_probs=15.3
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|++|+||||++.
T Consensus 4 ~I~i~G~~GsGKST~a~ 20 (181)
T 1ly1_A 4 IILTIGCPGSGKSTWAR 20 (181)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEecCCCCCHHHHHH
Confidence 58999999999999875
No 48
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=93.69 E-value=0.023 Score=52.92 Aligned_cols=21 Identities=19% Similarity=0.521 Sum_probs=18.3
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|+.++|.|+||+|||||..
T Consensus 17 ~~g~~ivl~GPSGaGKsTL~~ 37 (197)
T 3ney_A 17 QGRKTLVLIGASGVGRSHIKN 37 (197)
T ss_dssp CSCCEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECcCCCCHHHHHH
Confidence 368899999999999999764
No 49
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=93.64 E-value=0.023 Score=53.42 Aligned_cols=21 Identities=29% Similarity=0.566 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||+|||||..
T Consensus 29 ~~Ge~~~i~G~nGsGKSTLl~ 49 (237)
T 2cbz_A 29 PEGALVAVVGQVGCGKSSLLS 49 (237)
T ss_dssp CTTCEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999754
No 50
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=93.58 E-value=0.024 Score=50.78 Aligned_cols=21 Identities=29% Similarity=0.365 Sum_probs=18.4
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|.||+|||||+.
T Consensus 19 ~~~~~i~i~G~~GsGKSTl~~ 39 (207)
T 2qt1_A 19 SKTFIIGISGVTNSGKTTLAK 39 (207)
T ss_dssp CCCEEEEEEESTTSSHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 457789999999999999875
No 51
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=93.55 E-value=0.021 Score=49.85 Aligned_cols=20 Identities=40% Similarity=0.390 Sum_probs=17.2
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+..++|.|+||+||||++.
T Consensus 10 ~~~~i~i~G~~GsGKst~~~ 29 (180)
T 3iij_A 10 LLPNILLTGTPGVGKTTLGK 29 (180)
T ss_dssp CCCCEEEECSTTSSHHHHHH
T ss_pred cCCeEEEEeCCCCCHHHHHH
Confidence 35679999999999999875
No 52
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=93.45 E-value=0.027 Score=52.21 Aligned_cols=21 Identities=29% Similarity=0.498 Sum_probs=18.1
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||||||||..
T Consensus 20 ~~Ge~~~liG~nGsGKSTLl~ 40 (208)
T 3b85_A 20 DTNTIVFGLGPAGSGKTYLAM 40 (208)
T ss_dssp HHCSEEEEECCTTSSTTHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 457899999999999999754
No 53
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=93.45 E-value=0.023 Score=54.00 Aligned_cols=21 Identities=48% Similarity=0.831 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||+|||||..
T Consensus 31 ~~Ge~~~liG~nGsGKSTLlk 51 (257)
T 1g6h_A 31 NKGDVTLIIGPNGSGKSTLIN 51 (257)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred eCCCEEEEECCCCCCHHHHHH
Confidence 578899999999999999764
No 54
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=93.43 E-value=0.026 Score=54.28 Aligned_cols=21 Identities=38% Similarity=0.781 Sum_probs=18.8
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||+|||||..
T Consensus 48 ~~Gei~~liG~NGsGKSTLlk 68 (263)
T 2olj_A 48 REGEVVVVIGPSGSGKSTFLR 68 (263)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEEcCCCCcHHHHHH
Confidence 678999999999999999764
No 55
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=93.36 E-value=0.024 Score=52.93 Aligned_cols=21 Identities=33% Similarity=0.539 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||+|||||..
T Consensus 32 ~~Ge~~~i~G~nGsGKSTLl~ 52 (229)
T 2pze_A 32 ERGQLLAVAGSTGAGKTSLLM 52 (229)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 578999999999999999754
No 56
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=93.36 E-value=0.029 Score=49.05 Aligned_cols=20 Identities=30% Similarity=0.584 Sum_probs=17.7
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++|+|++|+|||||..
T Consensus 35 ~g~~~~l~G~~G~GKTtL~~ 54 (149)
T 2kjq_A 35 HGQFIYVWGEEGAGKSHLLQ 54 (149)
T ss_dssp CCSEEEEESSSTTTTCHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 56789999999999999765
No 57
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=93.36 E-value=0.024 Score=53.70 Aligned_cols=21 Identities=48% Similarity=0.743 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||+|||||..
T Consensus 33 ~~Ge~~~i~G~nGsGKSTLl~ 53 (247)
T 2ff7_A 33 KQGEVIGIVGRSGSGKSTLTK 53 (247)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 578899999999999999754
No 58
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=93.35 E-value=0.027 Score=56.98 Aligned_cols=21 Identities=43% Similarity=0.718 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..++++|+||||||||..
T Consensus 28 ~~Ge~~~llGpsGsGKSTLLr 48 (359)
T 3fvq_A 28 DPGEILFIIGASGCGKTTLLR 48 (359)
T ss_dssp CTTCEEEEEESTTSSHHHHHH
T ss_pred cCCCEEEEECCCCchHHHHHH
Confidence 678999999999999999654
No 59
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=93.35 E-value=0.02 Score=51.00 Aligned_cols=19 Identities=26% Similarity=0.594 Sum_probs=16.7
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
..+++|.|+||||||||+.
T Consensus 18 ~~~I~l~G~~GsGKSTla~ 36 (202)
T 3t61_A 18 PGSIVVMGVSGSGKSSVGE 36 (202)
T ss_dssp SSCEEEECSTTSCHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4579999999999999875
No 60
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=93.33 E-value=0.025 Score=53.57 Aligned_cols=21 Identities=38% Similarity=0.713 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.++++.|+||+|||||..
T Consensus 27 ~~Ge~~~l~G~nGsGKSTLlk 47 (250)
T 2d2e_A 27 PKGEVHALMGPNGAGKSTLGK 47 (250)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 578999999999999999754
No 61
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=93.32 E-value=0.025 Score=53.22 Aligned_cols=21 Identities=33% Similarity=0.602 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||+|||||..
T Consensus 30 ~~Ge~~~l~G~nGsGKSTLl~ 50 (240)
T 1ji0_A 30 PRGQIVTLIGANGAGKTTTLS 50 (240)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 578899999999999999754
No 62
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=93.31 E-value=0.022 Score=49.29 Aligned_cols=17 Identities=29% Similarity=0.683 Sum_probs=15.3
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|++||||||++.
T Consensus 3 ~I~i~G~~GsGKsT~~~ 19 (194)
T 1nks_A 3 IGIVTGIPGVGKSTVLA 19 (194)
T ss_dssp EEEEEECTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999875
No 63
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=93.29 E-value=0.025 Score=54.37 Aligned_cols=21 Identities=33% Similarity=0.632 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||+|||||..
T Consensus 35 ~~Ge~~~liG~nGsGKSTLl~ 55 (266)
T 4g1u_C 35 ASGEMVAIIGPNGAGKSTLLR 55 (266)
T ss_dssp ETTCEEEEECCTTSCHHHHHH
T ss_pred cCCCEEEEECCCCCcHHHHHH
Confidence 568999999999999999764
No 64
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=93.26 E-value=0.026 Score=54.74 Aligned_cols=21 Identities=43% Similarity=0.678 Sum_probs=18.8
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||||||||..
T Consensus 32 ~~Ge~~~iiGpnGsGKSTLl~ 52 (275)
T 3gfo_A 32 KRGEVTAILGGNGVGKSTLFQ 52 (275)
T ss_dssp ETTSEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999764
No 65
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=93.25 E-value=0.026 Score=50.77 Aligned_cols=19 Identities=42% Similarity=0.469 Sum_probs=16.7
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+.++++.|+|||||||++.
T Consensus 5 ~~~i~i~G~~GsGKSTl~~ 23 (227)
T 1cke_A 5 APVITIDGPSGAGKGTLCK 23 (227)
T ss_dssp SCEEEEECCTTSSHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 3579999999999999876
No 66
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=93.25 E-value=0.026 Score=53.12 Aligned_cols=21 Identities=33% Similarity=0.553 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||+|||||..
T Consensus 26 ~~Ge~~~i~G~nGsGKSTLl~ 46 (243)
T 1mv5_A 26 QPNSIIAFAGPSGGGKSTIFS 46 (243)
T ss_dssp CTTEEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 568899999999999999754
No 67
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=93.21 E-value=0.03 Score=53.89 Aligned_cols=21 Identities=33% Similarity=0.632 Sum_probs=18.8
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||+|||||..
T Consensus 43 ~~Ge~~~i~G~nGsGKSTLlk 63 (271)
T 2ixe_A 43 YPGKVTALVGPNGSGKSTVAA 63 (271)
T ss_dssp CTTCEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 678899999999999999754
No 68
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=93.18 E-value=0.03 Score=53.55 Aligned_cols=21 Identities=33% Similarity=0.575 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||+|||||..
T Consensus 39 ~~Gei~~l~G~NGsGKSTLlk 59 (256)
T 1vpl_A 39 EEGEIFGLIGPNGAGKTTTLR 59 (256)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHH
Confidence 578999999999999999754
No 69
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=93.15 E-value=0.03 Score=49.62 Aligned_cols=20 Identities=40% Similarity=0.632 Sum_probs=17.8
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++|.|.+||||||++.
T Consensus 9 ~~~~I~l~G~~GsGKST~~~ 28 (212)
T 2wwf_A 9 KGKFIVFEGLDRSGKSTQSK 28 (212)
T ss_dssp CSCEEEEEESTTSSHHHHHH
T ss_pred cCCEEEEEcCCCCCHHHHHH
Confidence 46789999999999999875
No 70
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=93.14 E-value=0.032 Score=49.65 Aligned_cols=30 Identities=27% Similarity=0.288 Sum_probs=17.9
Q ss_pred eecccccc-CCCCCEEEEEecCCCCcccccc
Q 013022 323 SLHSGCNM-GKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 323 pmH~sanv-g~~G~valffGLSGTGKTTLSa 352 (451)
+.|.|--. ...+..++|.|++||||||++.
T Consensus 8 ~~~~~~~~~~~~~~~I~l~G~~GsGKST~a~ 38 (201)
T 2cdn_A 8 HHHSSGLVPRGSHMRVLLLGPPGAGKGTQAV 38 (201)
T ss_dssp --------CCCSCCEEEEECCTTSSHHHHHH
T ss_pred ccccccccCCCCCeEEEEECCCCCCHHHHHH
Confidence 34555222 2345679999999999999875
No 71
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=93.12 E-value=0.031 Score=53.43 Aligned_cols=21 Identities=38% Similarity=0.672 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||+|||||..
T Consensus 31 ~~Ge~~~liG~nGsGKSTLl~ 51 (266)
T 2yz2_A 31 NEGECLLVAGNTGSGKSTLLQ 51 (266)
T ss_dssp CTTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCcHHHHHH
Confidence 678999999999999999754
No 72
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=93.12 E-value=0.031 Score=53.32 Aligned_cols=21 Identities=29% Similarity=0.635 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||+|||||..
T Consensus 44 ~~Ge~~~i~G~nGsGKSTLl~ 64 (260)
T 2ghi_A 44 PSGTTCALVGHTGSGKSTIAK 64 (260)
T ss_dssp CTTCEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 578899999999999999764
No 73
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=93.09 E-value=0.032 Score=53.50 Aligned_cols=21 Identities=43% Similarity=0.748 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||+|||||..
T Consensus 44 ~~Ge~~~l~G~NGsGKSTLlk 64 (267)
T 2zu0_C 44 HPGEVHAIMGPNGSGKSTLSA 64 (267)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 578899999999999999754
No 74
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=93.04 E-value=0.025 Score=52.77 Aligned_cols=21 Identities=48% Similarity=0.729 Sum_probs=18.4
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||+|||||..
T Consensus 33 ~~Ge~~~iiG~NGsGKSTLlk 53 (214)
T 1sgw_A 33 EKGNVVNFHGPNGIGKTTLLK 53 (214)
T ss_dssp ETTCCEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 568899999999999999754
No 75
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=92.93 E-value=0.034 Score=56.18 Aligned_cols=21 Identities=48% Similarity=0.681 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++++|+||||||||..
T Consensus 27 ~~Ge~~~llGpnGsGKSTLLr 47 (359)
T 2yyz_A 27 KDGEFVALLGPSGCGKTTTLL 47 (359)
T ss_dssp CTTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEEcCCCchHHHHHH
Confidence 578999999999999999754
No 76
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=92.89 E-value=0.034 Score=56.76 Aligned_cols=21 Identities=43% Similarity=0.790 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..++++|+||||||||..
T Consensus 27 ~~Ge~~~llGpsGsGKSTLLr 47 (381)
T 3rlf_A 27 HEGEFVVFVGPSGCGKSTLLR 47 (381)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEEcCCCchHHHHHH
Confidence 678999999999999999754
No 77
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=92.86 E-value=0.031 Score=54.07 Aligned_cols=21 Identities=48% Similarity=0.824 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||+|||||..
T Consensus 45 ~~Ge~~~liG~NGsGKSTLlk 65 (279)
T 2ihy_A 45 AKGDKWILYGLNGAGKTTLLN 65 (279)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCcHHHHHH
Confidence 568899999999999999754
No 78
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=92.86 E-value=0.034 Score=51.44 Aligned_cols=20 Identities=30% Similarity=0.388 Sum_probs=17.2
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+..++|.|++|||||||..
T Consensus 26 ~~~~i~l~G~~GsGKSTl~k 45 (246)
T 2bbw_A 26 KLLRAVILGPPGSGKGTVCQ 45 (246)
T ss_dssp CCCEEEEECCTTSSHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHH
Confidence 35789999999999999764
No 79
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=92.86 E-value=0.031 Score=53.95 Aligned_cols=20 Identities=35% Similarity=0.502 Sum_probs=17.5
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+..++|.|+||||||||+.
T Consensus 32 ~~~livl~G~sGsGKSTla~ 51 (287)
T 1gvn_B 32 SPTAFLLGGQPGSGKTSLRS 51 (287)
T ss_dssp SCEEEEEECCTTSCTHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 35679999999999999875
No 80
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=92.83 E-value=0.035 Score=56.09 Aligned_cols=21 Identities=48% Similarity=0.759 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++++|+||||||||..
T Consensus 27 ~~Ge~~~llGpnGsGKSTLLr 47 (362)
T 2it1_A 27 KDGEFMALLGPSGSGKSTLLY 47 (362)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECCCCchHHHHHH
Confidence 578999999999999999754
No 81
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=92.82 E-value=0.038 Score=48.99 Aligned_cols=20 Identities=30% Similarity=0.494 Sum_probs=17.6
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++|.|.+||||||++.
T Consensus 8 ~~~~I~l~G~~GsGKsT~~~ 27 (215)
T 1nn5_A 8 RGALIVLEGVDRAGKSTQSR 27 (215)
T ss_dssp CCCEEEEEESTTSSHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHH
Confidence 46789999999999999875
No 82
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=92.80 E-value=0.032 Score=54.70 Aligned_cols=20 Identities=45% Similarity=0.712 Sum_probs=17.9
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|.+++|.|+||+|||||..
T Consensus 101 ~g~vi~lvG~nGsGKTTll~ 120 (304)
T 1rj9_A 101 KGRVVLVVGVNGVGKTTTIA 120 (304)
T ss_dssp SSSEEEEECSTTSSHHHHHH
T ss_pred CCeEEEEECCCCCcHHHHHH
Confidence 57899999999999999765
No 83
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=92.80 E-value=0.033 Score=53.01 Aligned_cols=21 Identities=38% Similarity=0.684 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||+|||||..
T Consensus 29 ~~Ge~~~l~G~nGsGKSTLl~ 49 (253)
T 2nq2_C 29 NKGDILAVLGQNGCGKSTLLD 49 (253)
T ss_dssp ETTCEEEEECCSSSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 568899999999999999754
No 84
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=92.79 E-value=0.036 Score=56.23 Aligned_cols=21 Identities=48% Similarity=0.726 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++++|+||||||||..
T Consensus 35 ~~Ge~~~llGpnGsGKSTLLr 55 (372)
T 1v43_A 35 KDGEFLVLLGPSGCGKTTTLR 55 (372)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECCCCChHHHHHH
Confidence 678999999999999999754
No 85
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=92.74 E-value=0.032 Score=51.75 Aligned_cols=21 Identities=19% Similarity=0.120 Sum_probs=18.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.++++.|++|||||||+.
T Consensus 23 ~~g~iigI~G~~GsGKSTl~k 43 (245)
T 2jeo_A 23 MRPFLIGVSGGTASGKSTVCE 43 (245)
T ss_dssp CCSEEEEEECSTTSSHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHH
Confidence 457889999999999999875
No 86
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=92.73 E-value=0.031 Score=49.26 Aligned_cols=19 Identities=37% Similarity=0.691 Sum_probs=16.7
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|..++|.|++||||||++.
T Consensus 4 ~~~I~i~G~~GsGKsT~~~ 22 (213)
T 2plr_A 4 GVLIAFEGIDGSGKSSQAT 22 (213)
T ss_dssp CEEEEEECCTTSSHHHHHH
T ss_pred CeEEEEEcCCCCCHHHHHH
Confidence 4579999999999999875
No 87
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=92.71 E-value=0.026 Score=49.20 Aligned_cols=19 Identities=37% Similarity=0.765 Sum_probs=16.5
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|..++|.|.+||||||++.
T Consensus 4 g~~I~l~G~~GsGKST~~~ 22 (186)
T 3cm0_A 4 GQAVIFLGPPGAGKGTQAS 22 (186)
T ss_dssp EEEEEEECCTTSCHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4579999999999999775
No 88
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=92.67 E-value=0.035 Score=48.80 Aligned_cols=20 Identities=50% Similarity=0.770 Sum_probs=17.5
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++|.|++|+||||++.
T Consensus 12 ~~~~i~l~G~~GsGKsT~~~ 31 (186)
T 2yvu_A 12 KGIVVWLTGLPGSGKTTIAT 31 (186)
T ss_dssp CCEEEEEECCTTSSHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHH
Confidence 46789999999999999775
No 89
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=92.66 E-value=0.036 Score=49.19 Aligned_cols=21 Identities=38% Similarity=0.449 Sum_probs=18.1
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|++|+|||||..
T Consensus 21 ~~G~~~~i~G~~GsGKTtl~~ 41 (235)
T 2w0m_A 21 PQGFFIALTGEPGTGKTIFSL 41 (235)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEEcCCCCCHHHHHH
Confidence 357889999999999999765
No 90
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=92.65 E-value=0.035 Score=56.07 Aligned_cols=21 Identities=38% Similarity=0.729 Sum_probs=18.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++++|+||||||||..
T Consensus 39 ~~Ge~~~llGpnGsGKSTLLr 59 (355)
T 1z47_A 39 REGEMVGLLGPSGSGKTTILR 59 (355)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHHH
Confidence 568899999999999999754
No 91
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=92.64 E-value=0.033 Score=54.73 Aligned_cols=22 Identities=18% Similarity=0.040 Sum_probs=19.1
Q ss_pred CCCCCEEEEEecCCCCcccccc
Q 013022 331 GKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 331 g~~G~valffGLSGTGKTTLSa 352 (451)
-+.|.++++.|+||+|||||..
T Consensus 87 ~~~g~ivgI~G~sGsGKSTL~~ 108 (312)
T 3aez_A 87 RPVPFIIGVAGSVAVGKSTTAR 108 (312)
T ss_dssp SCCCEEEEEECCTTSCHHHHHH
T ss_pred CCCCEEEEEECCCCchHHHHHH
Confidence 3568899999999999999875
No 92
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=92.61 E-value=0.036 Score=52.81 Aligned_cols=21 Identities=33% Similarity=0.675 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||+|||||..
T Consensus 24 ~~Ge~~~liG~NGsGKSTLlk 44 (249)
T 2qi9_C 24 RAGEILHLVGPNGAGKSTLLA 44 (249)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCcHHHHHH
Confidence 568899999999999999764
No 93
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=92.60 E-value=0.035 Score=56.18 Aligned_cols=21 Identities=48% Similarity=0.749 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..++++|+||||||||..
T Consensus 27 ~~Ge~~~llGpnGsGKSTLLr 47 (372)
T 1g29_1 27 KDGEFMILLGPSGCGKTTTLR 47 (372)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHH
Confidence 578999999999999999754
No 94
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=92.58 E-value=0.04 Score=50.72 Aligned_cols=22 Identities=36% Similarity=0.392 Sum_probs=19.0
Q ss_pred CCCCCEEEEEecCCCCcccccc
Q 013022 331 GKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 331 g~~G~valffGLSGTGKTTLSa 352 (451)
.+.|..++|.|.+|+|||||..
T Consensus 17 ~~~g~~i~i~G~~GsGKSTl~~ 38 (230)
T 2vp4_A 17 GTQPFTVLIEGNIGSGKTTYLN 38 (230)
T ss_dssp TCCCEEEEEECSTTSCHHHHHH
T ss_pred CCCceEEEEECCCCCCHHHHHH
Confidence 3568889999999999999764
No 95
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=92.55 E-value=0.041 Score=48.79 Aligned_cols=21 Identities=33% Similarity=0.502 Sum_probs=18.4
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|.+|+|||||+.
T Consensus 18 ~~G~~~~i~G~~GsGKTtl~~ 38 (220)
T 2cvh_A 18 APGVLTQVYGPYASGKTTLAL 38 (220)
T ss_dssp CTTSEEEEECSTTSSHHHHHH
T ss_pred cCCEEEEEECCCCCCHHHHHH
Confidence 457899999999999999765
No 96
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=92.51 E-value=0.037 Score=49.78 Aligned_cols=21 Identities=43% Similarity=0.362 Sum_probs=17.9
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.++++.|.||+|||||+.
T Consensus 20 ~~~~~i~i~G~~GsGKstl~~ 40 (201)
T 1rz3_A 20 AGRLVLGIDGLSRSGKTTLAN 40 (201)
T ss_dssp SSSEEEEEEECTTSSHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 346789999999999999875
No 97
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=92.47 E-value=0.038 Score=47.88 Aligned_cols=19 Identities=26% Similarity=0.331 Sum_probs=12.5
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|.|++||||||++.
T Consensus 5 ~~~I~l~G~~GsGKST~a~ 23 (183)
T 2vli_A 5 SPIIWINGPFGVGKTHTAH 23 (183)
T ss_dssp CCEEEEECCC----CHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4579999999999999775
No 98
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=92.44 E-value=0.035 Score=50.65 Aligned_cols=19 Identities=37% Similarity=0.494 Sum_probs=16.5
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|.+++|.|++|+|||||..
T Consensus 1 G~~i~i~G~nG~GKTTll~ 19 (189)
T 2i3b_A 1 ARHVFLTGPPGVGKTTLIH 19 (189)
T ss_dssp CCCEEEESCCSSCHHHHHH
T ss_pred CCEEEEECCCCChHHHHHH
Confidence 5678999999999999764
No 99
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=92.43 E-value=0.038 Score=52.84 Aligned_cols=21 Identities=29% Similarity=0.444 Sum_probs=18.0
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++|.|+||+|||||..
T Consensus 23 ~~g~~v~i~Gp~GsGKSTll~ 43 (261)
T 2eyu_A 23 RKMGLILVTGPTGSGKSTTIA 43 (261)
T ss_dssp CSSEEEEEECSTTCSHHHHHH
T ss_pred CCCCEEEEECCCCccHHHHHH
Confidence 457789999999999999654
No 100
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=92.34 E-value=0.047 Score=47.67 Aligned_cols=20 Identities=25% Similarity=0.441 Sum_probs=17.3
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+..++|.|++||||||++.
T Consensus 8 ~~~~I~l~G~~GsGKsT~~~ 27 (196)
T 2c95_A 8 KTNIIFVVGGPGSGKGTQCE 27 (196)
T ss_dssp TSCEEEEEECTTSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 45689999999999999775
No 101
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=92.34 E-value=0.046 Score=48.14 Aligned_cols=20 Identities=40% Similarity=0.602 Sum_probs=17.4
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++|.|.+||||||++.
T Consensus 3 ~~~~I~l~G~~GsGKsT~~~ 22 (204)
T 2v54_A 3 RGALIVFEGLDKSGKTTQCM 22 (204)
T ss_dssp CCCEEEEECCTTSSHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHH
Confidence 35679999999999999775
No 102
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=92.30 E-value=0.048 Score=53.96 Aligned_cols=21 Identities=29% Similarity=0.469 Sum_probs=18.8
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++|.|+||||||||..
T Consensus 124 ~~Ge~vaIvGpsGsGKSTLl~ 144 (305)
T 2v9p_A 124 PKKNCLAFIGPPNTGKSMLCN 144 (305)
T ss_dssp TTCSEEEEECSSSSSHHHHHH
T ss_pred cCCCEEEEECCCCCcHHHHHH
Confidence 568899999999999999765
No 103
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=92.30 E-value=0.048 Score=53.21 Aligned_cols=21 Identities=33% Similarity=0.539 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||+|||||..
T Consensus 62 ~~Ge~~~i~G~NGsGKSTLlk 82 (290)
T 2bbs_A 62 ERGQLLAVAGSTGAGKTSLLM 82 (290)
T ss_dssp CTTCEEEEEESTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCcHHHHHH
Confidence 678999999999999999754
No 104
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=92.30 E-value=0.021 Score=50.01 Aligned_cols=19 Identities=26% Similarity=0.441 Sum_probs=16.8
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|.|++||||||++.
T Consensus 12 ~~~I~l~G~~GsGKsT~a~ 30 (199)
T 2bwj_A 12 CKIIFIIGGPGSGKGTQCE 30 (199)
T ss_dssp SCEEEEEECTTSSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 4679999999999999875
No 105
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=92.25 E-value=0.043 Score=49.42 Aligned_cols=21 Identities=33% Similarity=0.559 Sum_probs=18.2
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|.+++|.|+||+|||||..
T Consensus 22 ~~G~~~~i~G~~GsGKTtl~~ 42 (243)
T 1n0w_A 22 ETGSITEMFGEFRTGKTQICH 42 (243)
T ss_dssp ETTSEEEEECCTTSSHHHHHH
T ss_pred cCCeEEEEECCCCCcHHHHHH
Confidence 457899999999999999764
No 106
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=92.22 E-value=0.046 Score=52.52 Aligned_cols=19 Identities=42% Similarity=0.760 Sum_probs=17.5
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|..+++.|+||+|||||..
T Consensus 30 Ge~~~i~G~NGsGKSTLlk 48 (263)
T 2pjz_A 30 GEKVIILGPNGSGKTTLLR 48 (263)
T ss_dssp SSEEEEECCTTSSHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHH
Confidence 8999999999999999754
No 107
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=92.21 E-value=0.032 Score=56.02 Aligned_cols=21 Identities=29% Similarity=0.575 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++++|+||||||||..
T Consensus 24 ~~Ge~~~llGpnGsGKSTLLr 44 (348)
T 3d31_A 24 ESGEYFVILGPTGAGKTLFLE 44 (348)
T ss_dssp CTTCEEEEECCCTHHHHHHHH
T ss_pred cCCCEEEEECCCCccHHHHHH
Confidence 678999999999999999754
No 108
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=92.19 E-value=0.047 Score=51.27 Aligned_cols=21 Identities=38% Similarity=0.344 Sum_probs=18.4
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.++++.|+||||||||..
T Consensus 25 ~~g~~I~I~G~~GsGKSTl~k 45 (252)
T 4e22_A 25 AIAPVITVDGPSGAGKGTLCK 45 (252)
T ss_dssp TTSCEEEEECCTTSSHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 557899999999999999764
No 109
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=92.13 E-value=0.039 Score=48.32 Aligned_cols=17 Identities=41% Similarity=0.690 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|.+||||||++.
T Consensus 2 ~I~i~G~~GsGKsT~~~ 18 (205)
T 2jaq_A 2 KIAIFGTVGAGKSTISA 18 (205)
T ss_dssp EEEEECCTTSCHHHHHH
T ss_pred EEEEECCCccCHHHHHH
Confidence 47899999999999875
No 110
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=92.09 E-value=0.051 Score=45.94 Aligned_cols=19 Identities=26% Similarity=0.517 Sum_probs=16.3
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
...++|.|++|||||||+.
T Consensus 43 ~~~~ll~G~~G~GKT~l~~ 61 (195)
T 1jbk_A 43 KNNPVLIGEPGVGKTAIVE 61 (195)
T ss_dssp SCEEEEECCTTSCHHHHHH
T ss_pred CCceEEECCCCCCHHHHHH
Confidence 3568999999999999874
No 111
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=92.04 E-value=0.051 Score=48.11 Aligned_cols=20 Identities=40% Similarity=0.592 Sum_probs=17.4
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+..+++.|.+||||||++.
T Consensus 9 ~~~~I~l~G~~GsGKSTv~~ 28 (184)
T 1y63_A 9 KGINILITGTPGTGKTSMAE 28 (184)
T ss_dssp SSCEEEEECSTTSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 45789999999999999775
No 112
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=92.00 E-value=0.052 Score=55.17 Aligned_cols=21 Identities=38% Similarity=0.553 Sum_probs=18.9
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||||||||..
T Consensus 52 ~~Gei~~IiGpnGaGKSTLlr 72 (366)
T 3tui_C 52 PAGQIYGVIGASGAGKSTLIR 72 (366)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred cCCCEEEEEcCCCchHHHHHH
Confidence 678999999999999999754
No 113
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=91.97 E-value=0.047 Score=49.29 Aligned_cols=21 Identities=38% Similarity=0.569 Sum_probs=18.1
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..++|.|++|+||||++.
T Consensus 23 ~~~~~i~~~G~~GsGKsT~~~ 43 (211)
T 1m7g_A 23 QRGLTIWLTGLSASGKSTLAV 43 (211)
T ss_dssp SSCEEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 456789999999999999775
No 114
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=91.97 E-value=0.044 Score=51.66 Aligned_cols=29 Identities=21% Similarity=0.395 Sum_probs=20.9
Q ss_pred EEEEEecCCCCcccccc----cCCCcee-cCCce
Q 013022 336 VALFFGLSGTGKTTLST----DHNRYLI-GDDEH 364 (451)
Q Consensus 336 valffGLSGTGKTTLSa----d~~r~lI-gDDe~ 364 (451)
.++++|++|||||||+. ..+..+| .|+.+
T Consensus 3 li~I~G~~GSGKSTla~~La~~~~~~~i~~D~~~ 36 (253)
T 2ze6_A 3 LHLIYGPTCSGKTDMAIQIAQETGWPVVALDRVQ 36 (253)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCCEEECCSGG
T ss_pred EEEEECCCCcCHHHHHHHHHhcCCCeEEeccHHh
Confidence 57899999999999876 2344455 46654
No 115
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=91.96 E-value=0.052 Score=48.23 Aligned_cols=19 Identities=21% Similarity=0.345 Sum_probs=16.7
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|.|++|||||||+.
T Consensus 52 ~~~~ll~G~~G~GKT~la~ 70 (242)
T 3bos_A 52 VQAIYLWGPVKSGRTHLIH 70 (242)
T ss_dssp CSEEEEECSTTSSHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHH
Confidence 4679999999999999874
No 116
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=91.95 E-value=0.039 Score=51.65 Aligned_cols=20 Identities=40% Similarity=0.454 Sum_probs=17.3
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+..++|.|+|||||||++.
T Consensus 31 ~~~~i~l~G~~GsGKSTla~ 50 (253)
T 2p5t_B 31 QPIAILLGGQSGAGKTTIHR 50 (253)
T ss_dssp SCEEEEEESCGGGTTHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 35679999999999999875
No 117
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=91.93 E-value=0.03 Score=56.21 Aligned_cols=21 Identities=38% Similarity=0.570 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++++|+||||||||..
T Consensus 29 ~~Ge~~~llGpnGsGKSTLLr 49 (353)
T 1oxx_K 29 ENGERFGILGPSGAGKTTFMR 49 (353)
T ss_dssp CTTCEEEEECSCHHHHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHHH
Confidence 678999999999999999653
No 118
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=91.92 E-value=0.045 Score=49.28 Aligned_cols=17 Identities=41% Similarity=0.546 Sum_probs=14.6
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|+||+|||||..
T Consensus 2 ~i~l~G~nGsGKTTLl~ 18 (178)
T 1ye8_A 2 KIIITGEPGVGKTTLVK 18 (178)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999999754
No 119
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=91.91 E-value=0.044 Score=53.66 Aligned_cols=47 Identities=23% Similarity=0.323 Sum_probs=28.8
Q ss_pred hhhhHHHHHHHHhcccCCeeeecccccc-CCCCCEEEEEecCCCCcccccc
Q 013022 303 EMKKGLFSVMHYLMPKRQILSLHSGCNM-GKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 303 EmKKgifTl~n~~l~~~G~LpmH~sanv-g~~G~valffGLSGTGKTTLSa 352 (451)
++++.+...+.-++.....+ -..+. ...|.+++|.|++|+|||||..
T Consensus 71 ~~~~~~~~~l~~~l~~~~~~---~~l~~~~~~g~vi~lvG~nGsGKTTll~ 118 (302)
T 3b9q_A 71 EIKDALKESVLEMLAKKNSK---TELQLGFRKPAVIMIVGVNGGGKTTSLG 118 (302)
T ss_dssp HHHHHHHHHHHHHHCC--CC---CSCCCCSSSCEEEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCcccc---cccccccCCCcEEEEEcCCCCCHHHHHH
Confidence 46666666665554322100 01122 2468899999999999999765
No 120
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=91.89 E-value=0.027 Score=50.06 Aligned_cols=17 Identities=35% Similarity=0.550 Sum_probs=15.3
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|.||||||||+.
T Consensus 2 ~I~i~G~~GsGKsTl~~ 18 (214)
T 1gtv_A 2 LIAIEGVDGAGKRTLVE 18 (214)
T ss_dssp EEEEEEEEEEEHHHHHH
T ss_pred EEEEEcCCCCCHHHHHH
Confidence 57899999999999875
No 121
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=91.88 E-value=0.045 Score=47.39 Aligned_cols=19 Identities=32% Similarity=0.389 Sum_probs=16.4
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|.|.+||||||++.
T Consensus 3 ~~~I~l~G~~GsGKsT~a~ 21 (196)
T 1tev_A 3 PLVVFVLGGPGAGKGTQCA 21 (196)
T ss_dssp CEEEEEECCTTSSHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHH
Confidence 3468999999999999875
No 122
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=91.63 E-value=0.047 Score=48.87 Aligned_cols=17 Identities=35% Similarity=0.612 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|++||||||++.
T Consensus 2 ~I~l~G~~GsGKsT~a~ 18 (216)
T 3fb4_A 2 NIVLMGLPGAGKGTQAE 18 (216)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 37899999999999875
No 123
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=91.62 E-value=0.048 Score=47.47 Aligned_cols=17 Identities=41% Similarity=0.800 Sum_probs=15.2
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|++||||||++.
T Consensus 6 ~i~i~G~~GsGKsTla~ 22 (175)
T 1via_A 6 NIVFIGFMGSGKSTLAR 22 (175)
T ss_dssp CEEEECCTTSCHHHHHH
T ss_pred EEEEEcCCCCCHHHHHH
Confidence 58899999999999875
No 124
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=91.61 E-value=0.049 Score=46.25 Aligned_cols=19 Identities=26% Similarity=0.531 Sum_probs=16.2
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
...++|.|++|||||||+.
T Consensus 43 ~~~vll~G~~G~GKT~la~ 61 (187)
T 2p65_A 43 KNNPILLGDPGVGKTAIVE 61 (187)
T ss_dssp SCEEEEESCGGGCHHHHHH
T ss_pred CCceEEECCCCCCHHHHHH
Confidence 3468999999999999875
No 125
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=91.57 E-value=0.056 Score=52.42 Aligned_cols=21 Identities=19% Similarity=0.173 Sum_probs=18.1
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.++++.|.||||||||+.
T Consensus 78 ~~g~iigI~G~~GsGKSTl~~ 98 (308)
T 1sq5_A 78 RIPYIISIAGSVAVGKSTTAR 98 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHH
Confidence 456789999999999999775
No 126
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=91.56 E-value=0.064 Score=54.73 Aligned_cols=21 Identities=33% Similarity=0.569 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||||||||..
T Consensus 45 ~~Ge~~~llGpsGsGKSTLLr 65 (390)
T 3gd7_A 45 SPGQRVGLLGRTGSGKSTLLS 65 (390)
T ss_dssp CTTCEEEEEESTTSSHHHHHH
T ss_pred cCCCEEEEECCCCChHHHHHH
Confidence 678999999999999999653
No 127
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=91.51 E-value=0.05 Score=47.52 Aligned_cols=17 Identities=35% Similarity=0.579 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|.+||||||++.
T Consensus 2 ~I~l~G~~GsGKsT~~~ 18 (197)
T 2z0h_A 2 FITFEGIDGSGKSTQIQ 18 (197)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999999875
No 128
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=91.45 E-value=0.064 Score=50.71 Aligned_cols=18 Identities=28% Similarity=0.630 Sum_probs=16.3
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..+++.|+||+|||||..
T Consensus 25 e~~~liG~nGsGKSTLl~ 42 (240)
T 2onk_A 25 DYCVLLGPTGAGKSVFLE 42 (240)
T ss_dssp SEEEEECCTTSSHHHHHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 889999999999999754
No 129
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=91.45 E-value=0.055 Score=46.91 Aligned_cols=17 Identities=41% Similarity=0.692 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|.+||||||++.
T Consensus 2 ~I~l~G~~GsGKsT~~~ 18 (195)
T 2pbr_A 2 LIAFEGIDGSGKTTQAK 18 (195)
T ss_dssp EEEEECSTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999999875
No 130
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=91.45 E-value=0.055 Score=48.20 Aligned_cols=17 Identities=35% Similarity=0.516 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.+++.|.+||||||++.
T Consensus 4 ~i~l~G~~GsGKST~~~ 20 (206)
T 1jjv_A 4 IVGLTGGIGSGKTTIAN 20 (206)
T ss_dssp EEEEECSTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 57899999999999765
No 131
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=91.41 E-value=0.052 Score=48.74 Aligned_cols=17 Identities=35% Similarity=0.591 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++||||||++.
T Consensus 2 ~I~l~G~~GsGKsT~a~ 18 (216)
T 3dl0_A 2 NLVLMGLPGAGKGTQGE 18 (216)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 37899999999999875
No 132
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=91.40 E-value=0.053 Score=49.81 Aligned_cols=18 Identities=44% Similarity=0.529 Sum_probs=15.4
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
+.++|.|+||+|||||..
T Consensus 2 RpIVi~GPSG~GK~Tl~~ 19 (186)
T 1ex7_A 2 RPIVISGPSGTGKSTLLK 19 (186)
T ss_dssp CCEEEECCTTSSHHHHHH
T ss_pred CEEEEECCCCCCHHHHHH
Confidence 358999999999999764
No 133
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=91.40 E-value=0.065 Score=47.15 Aligned_cols=21 Identities=29% Similarity=0.360 Sum_probs=17.9
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|.+|+|||||..
T Consensus 24 ~~~~~v~lvG~~g~GKSTLl~ 44 (210)
T 1pui_A 24 DTGIEVAFAGRSNAGKSSALN 44 (210)
T ss_dssp SCSEEEEEEECTTSSHHHHHT
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 456789999999999999764
No 134
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=91.37 E-value=0.051 Score=47.41 Aligned_cols=17 Identities=41% Similarity=0.794 Sum_probs=15.3
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|++||||||++.
T Consensus 4 ~I~l~G~~GsGKsT~a~ 20 (184)
T 2iyv_A 4 KAVLVGLPGSGKSTIGR 20 (184)
T ss_dssp SEEEECSTTSSHHHHHH
T ss_pred eEEEECCCCCCHHHHHH
Confidence 58999999999999875
No 135
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=91.36 E-value=0.046 Score=53.95 Aligned_cols=22 Identities=32% Similarity=0.453 Sum_probs=19.3
Q ss_pred CCCCCEEEEEecCCCCcccccc
Q 013022 331 GKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 331 g~~G~valffGLSGTGKTTLSa 352 (451)
-+.|..+++.|+||+|||||..
T Consensus 77 i~~Ge~vaivG~sGsGKSTLl~ 98 (306)
T 3nh6_A 77 VMPGQTLALVGPSGAGKSTILR 98 (306)
T ss_dssp ECTTCEEEEESSSCHHHHHHHH
T ss_pred EcCCCEEEEECCCCchHHHHHH
Confidence 3678999999999999999764
No 136
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=91.36 E-value=0.052 Score=50.06 Aligned_cols=16 Identities=44% Similarity=0.717 Sum_probs=14.7
Q ss_pred EEEEecCCCCcccccc
Q 013022 337 ALFFGLSGTGKTTLST 352 (451)
Q Consensus 337 alffGLSGTGKTTLSa 352 (451)
++|+|++|||||||..
T Consensus 52 ~ll~G~~G~GKTtl~~ 67 (254)
T 1ixz_A 52 VLLVGPPGVGKTHLAR 67 (254)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 9999999999999764
No 137
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=91.28 E-value=0.054 Score=46.44 Aligned_cols=18 Identities=28% Similarity=0.506 Sum_probs=15.7
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|.|++||||||++.
T Consensus 3 ~~I~l~G~~GsGKsT~a~ 20 (173)
T 1e6c_A 3 EPIFMVGARGCGMTTVGR 20 (173)
T ss_dssp CCEEEESCTTSSHHHHHH
T ss_pred ceEEEECCCCCCHHHHHH
Confidence 358999999999999875
No 138
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=91.16 E-value=0.057 Score=53.64 Aligned_cols=21 Identities=38% Similarity=0.631 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|.+++|.|+||+|||||..
T Consensus 127 ~~g~vi~lvG~nGaGKTTll~ 147 (328)
T 3e70_C 127 EKPYVIMFVGFNGSGKTTTIA 147 (328)
T ss_dssp CSSEEEEEECCTTSSHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 458899999999999999765
No 139
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=91.03 E-value=0.058 Score=49.83 Aligned_cols=18 Identities=44% Similarity=0.612 Sum_probs=15.6
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|.|++|||||||+.
T Consensus 46 ~~vll~G~~GtGKT~la~ 63 (257)
T 1lv7_A 46 KGVLMVGPPGTGKTLLAK 63 (257)
T ss_dssp CEEEEECCTTSCHHHHHH
T ss_pred CeEEEECcCCCCHHHHHH
Confidence 349999999999999874
No 140
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=91.02 E-value=0.071 Score=47.20 Aligned_cols=18 Identities=33% Similarity=0.355 Sum_probs=16.2
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|+|.+|||||||+.
T Consensus 55 ~~~~l~G~~GtGKT~la~ 72 (202)
T 2w58_A 55 KGLYLHGSFGVGKTYLLA 72 (202)
T ss_dssp CEEEEECSTTSSHHHHHH
T ss_pred CeEEEECCCCCCHHHHHH
Confidence 579999999999999874
No 141
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=90.97 E-value=0.065 Score=45.82 Aligned_cols=17 Identities=24% Similarity=0.479 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|.+||||||++.
T Consensus 2 ~I~l~G~~GsGKsT~a~ 18 (168)
T 2pt5_A 2 RIYLIGFMCSGKSTVGS 18 (168)
T ss_dssp EEEEESCTTSCHHHHHH
T ss_pred eEEEECCCCCCHHHHHH
Confidence 47899999999999875
No 142
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=90.94 E-value=0.073 Score=50.18 Aligned_cols=21 Identities=29% Similarity=0.471 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.++++.|.+|+|||||..
T Consensus 28 ~~G~i~~i~G~~GsGKTtl~~ 48 (279)
T 1nlf_A 28 VAGTVGALVSPGGAGKSMLAL 48 (279)
T ss_dssp ETTSEEEEEESTTSSHHHHHH
T ss_pred cCCCEEEEEcCCCCCHHHHHH
Confidence 468899999999999999764
No 143
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=90.91 E-value=0.072 Score=47.23 Aligned_cols=17 Identities=29% Similarity=0.339 Sum_probs=15.2
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.+++.|.+||||||++.
T Consensus 3 ~i~i~G~~GsGKSTl~~ 19 (204)
T 2if2_A 3 RIGLTGNIGCGKSTVAQ 19 (204)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECCCCcCHHHHHH
Confidence 58899999999999765
No 144
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=90.87 E-value=0.078 Score=47.92 Aligned_cols=20 Identities=25% Similarity=0.403 Sum_probs=17.0
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+..++|.|++||||||++.
T Consensus 3 ~~~~I~l~G~~GsGKsT~a~ 22 (220)
T 1aky_A 3 ESIRMVLIGPPGAGKGTQAP 22 (220)
T ss_dssp CCCEEEEECCTTSSHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHH
Confidence 35679999999999999775
No 145
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=90.85 E-value=0.073 Score=49.99 Aligned_cols=20 Identities=40% Similarity=0.609 Sum_probs=17.2
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+..++|+|++|||||||+.
T Consensus 53 ~~~~vll~Gp~GtGKT~la~ 72 (297)
T 3b9p_A 53 PAKGLLLFGPPGNGKTLLAR 72 (297)
T ss_dssp CCSEEEEESSSSSCHHHHHH
T ss_pred CCCeEEEECcCCCCHHHHHH
Confidence 45679999999999999874
No 146
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=90.81 E-value=0.073 Score=47.16 Aligned_cols=19 Identities=32% Similarity=0.410 Sum_probs=16.5
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
...++|.|.+||||||++.
T Consensus 15 ~~~I~l~G~~GsGKsT~~~ 33 (203)
T 1ukz_A 15 VSVIFVLGGPGAGKGTQCE 33 (203)
T ss_dssp CEEEEEECSTTSSHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHH
Confidence 3579999999999999874
No 147
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=90.81 E-value=0.076 Score=50.94 Aligned_cols=20 Identities=40% Similarity=0.669 Sum_probs=17.3
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+..++|+|++|||||||+.
T Consensus 48 ~~~~vLL~Gp~GtGKT~la~ 67 (301)
T 3cf0_A 48 PSKGVLFYGPPGCGKTLLAK 67 (301)
T ss_dssp CCSEEEEECSSSSSHHHHHH
T ss_pred CCceEEEECCCCcCHHHHHH
Confidence 45679999999999999874
No 148
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=90.80 E-value=0.093 Score=46.24 Aligned_cols=17 Identities=35% Similarity=0.585 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.+++.|++|+|||||..
T Consensus 31 kv~lvG~~g~GKSTLl~ 47 (191)
T 1oix_A 31 KVVLIGDSGVGKSNLLS 47 (191)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 48999999999999764
No 149
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=90.79 E-value=0.064 Score=51.26 Aligned_cols=19 Identities=37% Similarity=0.700 Sum_probs=17.1
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|..++|.|+|||||||+..
T Consensus 48 g~~i~l~G~~GsGKSTl~~ 66 (250)
T 3nwj_A 48 GRSMYLVGMMGSGKTTVGK 66 (250)
T ss_dssp TCCEEEECSTTSCHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 6789999999999999765
No 150
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=90.72 E-value=0.1 Score=44.14 Aligned_cols=24 Identities=33% Similarity=0.360 Sum_probs=19.0
Q ss_pred ccCCCCCEEEEEecCCCCcccccc
Q 013022 329 NMGKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 329 nvg~~G~valffGLSGTGKTTLSa 352 (451)
++.+....++++|++|+|||||..
T Consensus 3 ~~~~~~~~i~v~G~~~~GKssl~~ 26 (178)
T 2lkc_A 3 HMVERPPVVTIMGHVDHGKTTLLD 26 (178)
T ss_dssp TTCCCCCEEEEESCTTTTHHHHHH
T ss_pred CcCCCCCEEEEECCCCCCHHHHHH
Confidence 344556679999999999999653
No 151
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=90.67 E-value=0.099 Score=49.17 Aligned_cols=21 Identities=38% Similarity=0.379 Sum_probs=17.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.+..++|+|++|||||+|+.
T Consensus 65 ~~~~~vll~G~~GtGKT~la~ 85 (309)
T 3syl_A 65 TPTLHMSFTGNPGTGKTTVAL 85 (309)
T ss_dssp CCCCEEEEEECTTSSHHHHHH
T ss_pred CCCceEEEECCCCCCHHHHHH
Confidence 345679999999999999874
No 152
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=90.65 E-value=0.086 Score=48.14 Aligned_cols=44 Identities=34% Similarity=0.486 Sum_probs=26.4
Q ss_pred hhhhHHHHHHHHhcccCCeeeeccccccC-CCCCEEEEEecCCCCcccccc
Q 013022 303 EMKKGLFSVMHYLMPKRQILSLHSGCNMG-KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 303 EmKKgifTl~n~~l~~~G~LpmH~sanvg-~~G~valffGLSGTGKTTLSa 352 (451)
+.|+.+-.+..++...+-+.. .+ .....++|+|++|||||||+.
T Consensus 13 ~~~~~l~~~~~~~~~~~~~~~------~g~~~~~~vll~G~~GtGKT~la~ 57 (262)
T 2qz4_A 13 EAKLEVREFVDYLKSPERFLQ------LGAKVPKGALLLGPPGCGKTLLAK 57 (262)
T ss_dssp HHHHHHHHHHHHHHCCC------------CCCCCEEEEESCTTSSHHHHHH
T ss_pred HHHHHHHHHHHHHHCHHHHHH------cCCCCCceEEEECCCCCCHHHHHH
Confidence 467777666655433222211 11 223569999999999999874
No 153
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=90.64 E-value=0.082 Score=47.58 Aligned_cols=21 Identities=43% Similarity=0.597 Sum_probs=18.2
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|.+|+|||||+.
T Consensus 21 ~~G~~~~i~G~~GsGKTtl~~ 41 (247)
T 2dr3_A 21 PERNVVLLSGGPGTGKTIFSQ 41 (247)
T ss_dssp ETTCEEEEEECTTSSHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 457899999999999999854
No 154
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=90.63 E-value=0.077 Score=45.82 Aligned_cols=18 Identities=33% Similarity=0.571 Sum_probs=15.9
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|.|.+||||||++.
T Consensus 7 ~~I~l~G~~GsGKsT~~~ 24 (194)
T 1qf9_A 7 NVVFVLGGPGSGKGTQCA 24 (194)
T ss_dssp EEEEEEESTTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 468999999999999775
No 155
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=90.56 E-value=0.079 Score=47.95 Aligned_cols=18 Identities=22% Similarity=0.239 Sum_probs=15.8
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|.|++||||||++.
T Consensus 6 ~~I~l~G~~GsGKsT~~~ 23 (222)
T 1zak_A 6 LKVMISGAPASGKGTQCE 23 (222)
T ss_dssp CCEEEEESTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 468999999999999765
No 156
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=90.55 E-value=0.085 Score=48.01 Aligned_cols=19 Identities=37% Similarity=0.475 Sum_probs=16.6
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|.|++||||||++.
T Consensus 7 ~~~I~l~G~~GsGKsT~a~ 25 (227)
T 1zd8_A 7 LLRAVIMGAPGSGKGTVSS 25 (227)
T ss_dssp CCEEEEEECTTSSHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHH
Confidence 4579999999999999775
No 157
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=90.55 E-value=0.083 Score=46.34 Aligned_cols=19 Identities=26% Similarity=0.326 Sum_probs=16.5
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
..++++.|.+||||||++.
T Consensus 8 ~~~I~i~G~~GsGKST~~~ 26 (203)
T 1uf9_A 8 PIIIGITGNIGSGKSTVAA 26 (203)
T ss_dssp CEEEEEEECTTSCHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHH
Confidence 4579999999999999775
No 158
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=90.54 E-value=0.09 Score=48.96 Aligned_cols=19 Identities=42% Similarity=0.630 Sum_probs=16.5
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|+|++|||||||+.
T Consensus 51 ~~~~ll~G~~GtGKT~la~ 69 (285)
T 3h4m_A 51 PKGILLYGPPGTGKTLLAK 69 (285)
T ss_dssp CSEEEEESSSSSSHHHHHH
T ss_pred CCeEEEECCCCCcHHHHHH
Confidence 4569999999999999874
No 159
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=90.40 E-value=0.073 Score=53.70 Aligned_cols=46 Identities=24% Similarity=0.330 Sum_probs=28.2
Q ss_pred hhhhHHHHHHHHhcccCC-eeeecccccc-CCCCCEEEEEecCCCCcccccc
Q 013022 303 EMKKGLFSVMHYLMPKRQ-ILSLHSGCNM-GKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 303 EmKKgifTl~n~~l~~~G-~LpmH~sanv-g~~G~valffGLSGTGKTTLSa 352 (451)
++++.+...+--++.... .-+ .+. ...|.+++|.|++|+|||||..
T Consensus 128 ~~~~~l~~~l~~~l~~~~~~~~----l~l~~~~g~vi~lvG~nGsGKTTll~ 175 (359)
T 2og2_A 128 EIKDALKESVLEMLAKKNSKTE----LQLGFRKPAVIMIVGVNGGGKTTSLG 175 (359)
T ss_dssp HHHHHHHHHHHHHHCCC---CS----CCCCSSSSEEEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCcccCCC----cceecCCCeEEEEEcCCCChHHHHHH
Confidence 456666655544443211 011 122 2457899999999999999765
No 160
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=90.39 E-value=0.085 Score=45.71 Aligned_cols=21 Identities=24% Similarity=0.382 Sum_probs=16.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++|.|.+|+|||||..
T Consensus 2 ~~~~ki~ivG~~g~GKStLl~ 22 (172)
T 2gj8_A 2 SHGMKVVIAGRPNAGKSSLLN 22 (172)
T ss_dssp --CEEEEEEESTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 346679999999999999654
No 161
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=90.31 E-value=0.097 Score=49.57 Aligned_cols=21 Identities=33% Similarity=0.544 Sum_probs=18.9
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|.+|+|||||..
T Consensus 33 ~~G~~~~i~G~~G~GKTTl~~ 53 (296)
T 1cr0_A 33 RGGEVIMVTSGSGMGKSTFVR 53 (296)
T ss_dssp CTTCEEEEEESTTSSHHHHHH
T ss_pred CCCeEEEEEeCCCCCHHHHHH
Confidence 578999999999999999764
No 162
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=90.28 E-value=0.096 Score=53.99 Aligned_cols=20 Identities=35% Similarity=0.436 Sum_probs=17.2
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++++|+||||||||..
T Consensus 156 ~Gq~~~IvG~sGsGKSTLl~ 175 (438)
T 2dpy_A 156 RGQRMGLFAGSGVGKSVLLG 175 (438)
T ss_dssp TTCEEEEEECTTSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 46789999999999999754
No 163
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=90.27 E-value=0.098 Score=45.51 Aligned_cols=16 Identities=25% Similarity=0.625 Sum_probs=14.6
Q ss_pred EEEEEecCCCCccccc
Q 013022 336 VALFFGLSGTGKTTLS 351 (451)
Q Consensus 336 valffGLSGTGKTTLS 351 (451)
..+|+|.+|||||||.
T Consensus 28 ~~~i~G~NGsGKStll 43 (182)
T 3kta_A 28 FTAIVGANGSGKSNIG 43 (182)
T ss_dssp EEEEEECTTSSHHHHH
T ss_pred cEEEECCCCCCHHHHH
Confidence 8999999999999954
No 164
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=90.11 E-value=0.079 Score=49.84 Aligned_cols=16 Identities=44% Similarity=0.717 Sum_probs=14.7
Q ss_pred EEEEecCCCCcccccc
Q 013022 337 ALFFGLSGTGKTTLST 352 (451)
Q Consensus 337 alffGLSGTGKTTLSa 352 (451)
++|+|++|||||||..
T Consensus 76 vll~Gp~GtGKTtl~~ 91 (278)
T 1iy2_A 76 VLLVGPPGVGKTHLAR 91 (278)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCcChHHHHHH
Confidence 8999999999999764
No 165
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=90.08 E-value=0.099 Score=52.25 Aligned_cols=20 Identities=40% Similarity=0.401 Sum_probs=17.2
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++++|.||+|||||..
T Consensus 70 ~Gq~~gIiG~nGaGKTTLl~ 89 (347)
T 2obl_A 70 IGQRIGIFAGSGVGKSTLLG 89 (347)
T ss_dssp TTCEEEEEECTTSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 46789999999999999754
No 166
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=90.01 E-value=0.079 Score=50.66 Aligned_cols=16 Identities=44% Similarity=0.642 Sum_probs=14.7
Q ss_pred EEEEecCCCCcccccc
Q 013022 337 ALFFGLSGTGKTTLST 352 (451)
Q Consensus 337 alffGLSGTGKTTLSa 352 (451)
++|+|++|||||||..
T Consensus 47 vlL~Gp~GtGKTtLak 62 (274)
T 2x8a_A 47 VLLAGPPGCGKTLLAK 62 (274)
T ss_dssp EEEESSTTSCHHHHHH
T ss_pred EEEECCCCCcHHHHHH
Confidence 9999999999999764
No 167
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=90.01 E-value=0.079 Score=51.64 Aligned_cols=18 Identities=50% Similarity=0.669 Sum_probs=15.8
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|+|++|||||||..
T Consensus 52 ~~~ll~Gp~G~GKTTLa~ 69 (334)
T 1in4_A 52 DHVLLAGPPGLGKTTLAH 69 (334)
T ss_dssp CCEEEESSTTSSHHHHHH
T ss_pred CeEEEECCCCCcHHHHHH
Confidence 468999999999999864
No 168
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=89.98 E-value=0.094 Score=47.19 Aligned_cols=19 Identities=26% Similarity=0.417 Sum_probs=16.3
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|.|.+||||||++.
T Consensus 4 ~~~I~i~G~~GSGKST~~~ 22 (218)
T 1vht_A 4 RYIVALTGGIGSGKSTVAN 22 (218)
T ss_dssp CEEEEEECCTTSCHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHH
Confidence 3579999999999999765
No 169
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=89.93 E-value=0.091 Score=49.40 Aligned_cols=19 Identities=37% Similarity=0.558 Sum_probs=16.4
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|.|++||||||++.
T Consensus 4 ~~lIvl~G~pGSGKSTla~ 22 (260)
T 3a4m_A 4 IMLIILTGLPGVGKSTFSK 22 (260)
T ss_dssp CEEEEEECCTTSSHHHHHH
T ss_pred CEEEEEEcCCCCCHHHHHH
Confidence 3468999999999999875
No 170
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=89.87 E-value=0.1 Score=50.14 Aligned_cols=17 Identities=41% Similarity=0.585 Sum_probs=14.6
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
++++.|.||+|||||-.
T Consensus 4 ~v~lvG~nGaGKSTLln 20 (270)
T 3sop_A 4 NIMVVGQSGLGKSTLVN 20 (270)
T ss_dssp EEEEEESSSSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 57899999999999653
No 171
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=89.81 E-value=0.098 Score=48.72 Aligned_cols=20 Identities=35% Similarity=0.436 Sum_probs=17.7
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++|.|++|+||||++.
T Consensus 25 ~g~~i~i~G~~GsGKsT~~~ 44 (229)
T 4eaq_A 25 MSAFITFEGPEGSGKTTVIN 44 (229)
T ss_dssp CCEEEEEECCTTSCHHHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHH
Confidence 57789999999999999765
No 172
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=89.76 E-value=0.094 Score=49.46 Aligned_cols=17 Identities=35% Similarity=0.642 Sum_probs=15.4
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|+|||||||++.
T Consensus 4 ~I~l~G~~GsGKST~a~ 20 (301)
T 1ltq_A 4 IILTIGCPGSGKSTWAR 20 (301)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999875
No 173
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=89.68 E-value=0.099 Score=50.85 Aligned_cols=20 Identities=30% Similarity=0.313 Sum_probs=17.3
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+.++++.|.||+|||||+.
T Consensus 30 ~~~ii~I~G~sGsGKSTla~ 49 (290)
T 1odf_A 30 CPLFIFFSGPQGSGKSFTSI 49 (290)
T ss_dssp SCEEEEEECCTTSSHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 45679999999999999875
No 174
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=89.67 E-value=0.098 Score=52.14 Aligned_cols=21 Identities=38% Similarity=0.469 Sum_probs=18.0
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|.||+|||||..
T Consensus 173 ~~G~~i~ivG~sGsGKSTll~ 193 (361)
T 2gza_A 173 QLERVIVVAGETGSGKTTLMK 193 (361)
T ss_dssp HTTCCEEEEESSSSCHHHHHH
T ss_pred hcCCEEEEECCCCCCHHHHHH
Confidence 457789999999999999664
No 175
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=89.67 E-value=0.11 Score=50.17 Aligned_cols=19 Identities=42% Similarity=0.700 Sum_probs=16.7
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|+|++|||||+|+.
T Consensus 70 ~~~vLl~GppGtGKT~la~ 88 (368)
T 3uk6_A 70 GRAVLIAGQPGTGKTAIAM 88 (368)
T ss_dssp TCEEEEEESTTSSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 4679999999999999874
No 176
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=89.62 E-value=0.11 Score=50.54 Aligned_cols=21 Identities=33% Similarity=0.529 Sum_probs=18.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.+++|.|++|+||||++.
T Consensus 103 ~~g~vi~lvG~~GsGKTTl~~ 123 (296)
T 2px0_A 103 IHSKYIVLFGSTGAGKTTTLA 123 (296)
T ss_dssp CCSSEEEEEESTTSSHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 457899999999999999765
No 177
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=89.61 E-value=0.11 Score=50.20 Aligned_cols=30 Identities=30% Similarity=0.587 Sum_probs=23.1
Q ss_pred eeccccccCC---------CCCEEEEEecCCCCcccccc
Q 013022 323 SLHSGCNMGK---------DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 323 pmH~sanvg~---------~G~valffGLSGTGKTTLSa 352 (451)
-+-+||+-+. .|..++|.|+||+|||||..
T Consensus 149 ~~~~SAktg~gv~~lf~~l~geiv~l~G~sG~GKSTll~ 187 (301)
T 1u0l_A 149 IVKTSAKTGMGIEELKEYLKGKISTMAGLSGVGKSSLLN 187 (301)
T ss_dssp EEECCTTTCTTHHHHHHHHSSSEEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHhcCCeEEEECCCCCcHHHHHH
Confidence 3456776543 37899999999999999654
No 178
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=89.59 E-value=0.11 Score=44.45 Aligned_cols=19 Identities=26% Similarity=0.448 Sum_probs=16.3
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|+|.+|||||+|+.
T Consensus 24 ~~~vll~G~~GtGKt~lA~ 42 (145)
T 3n70_A 24 DIAVWLYGAPGTGRMTGAR 42 (145)
T ss_dssp CSCEEEESSTTSSHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHH
Confidence 4458999999999999874
No 179
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=89.51 E-value=0.11 Score=48.49 Aligned_cols=19 Identities=37% Similarity=0.566 Sum_probs=16.7
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|+|++|+||||++.
T Consensus 29 ~~~I~l~G~~GsGKsT~a~ 47 (243)
T 3tlx_A 29 DGRYIFLGAPGSGKGTQSL 47 (243)
T ss_dssp CEEEEEECCTTSSHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHH
Confidence 4579999999999999875
No 180
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=89.45 E-value=0.12 Score=50.26 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=23.8
Q ss_pred CeeeeccccccC---------CCCCEEEEEecCCCCcccccc
Q 013022 320 QILSLHSGCNMG---------KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 320 G~LpmH~sanvg---------~~G~valffGLSGTGKTTLSa 352 (451)
|+-.+-.||.-+ ..|.+.+|.|.||+|||||..
T Consensus 142 g~~~~~~SA~~g~gi~~L~~~l~G~i~~l~G~sG~GKSTLln 183 (302)
T 2yv5_A 142 GYDVLKVSAKTGEGIDELVDYLEGFICILAGPSGVGKSSILS 183 (302)
T ss_dssp TCEEEECCTTTCTTHHHHHHHTTTCEEEEECSTTSSHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHhhccCcEEEEECCCCCCHHHHHH
Confidence 543444566543 248899999999999999653
No 181
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=89.41 E-value=0.061 Score=48.48 Aligned_cols=18 Identities=44% Similarity=0.473 Sum_probs=15.7
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
.+++|.|.||+|||||..
T Consensus 3 ~~v~IvG~SGsGKSTL~~ 20 (171)
T 2f1r_A 3 LILSIVGTSDSGKTTLIT 20 (171)
T ss_dssp CEEEEEESCHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 468999999999999775
No 182
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=89.37 E-value=0.12 Score=45.01 Aligned_cols=18 Identities=39% Similarity=0.661 Sum_probs=15.8
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|.|++|+|||||..
T Consensus 46 ~~~ll~G~~G~GKT~l~~ 63 (250)
T 1njg_A 46 HAYLFSGTRGVGKTSIAR 63 (250)
T ss_dssp SEEEEECSTTSCHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 478999999999999864
No 183
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=89.16 E-value=0.14 Score=54.18 Aligned_cols=21 Identities=38% Similarity=0.659 Sum_probs=18.9
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||+|||||..
T Consensus 368 ~~G~~~~ivG~sGsGKSTLl~ 388 (595)
T 2yl4_A 368 PSGSVTALVGPSGSGKSTVLS 388 (595)
T ss_dssp CTTCEEEEECCTTSSSTHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999764
No 184
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=89.16 E-value=0.13 Score=49.78 Aligned_cols=19 Identities=26% Similarity=0.391 Sum_probs=13.8
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
..++++.|.|||||||++.
T Consensus 5 ~~iIgItG~sGSGKSTva~ 23 (290)
T 1a7j_A 5 HPIISVTGSSGAGTSTVKH 23 (290)
T ss_dssp SCEEEEESCC---CCTHHH
T ss_pred ceEEEEECCCCCCHHHHHH
Confidence 4579999999999999885
No 185
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=89.15 E-value=0.11 Score=45.02 Aligned_cols=17 Identities=47% Similarity=0.606 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|++|||||||+.
T Consensus 40 ~~ll~G~~G~GKT~l~~ 56 (226)
T 2chg_A 40 HLLFSGPPGTGKTATAI 56 (226)
T ss_dssp CEEEECSTTSSHHHHHH
T ss_pred eEEEECCCCCCHHHHHH
Confidence 38999999999999864
No 186
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=89.15 E-value=0.13 Score=54.15 Aligned_cols=21 Identities=33% Similarity=0.653 Sum_probs=18.8
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|+.+++.|+||+|||||..
T Consensus 367 ~~G~~~~ivG~sGsGKSTLl~ 387 (582)
T 3b60_A 367 PAGKTVALVGRSGSGKSTIAS 387 (582)
T ss_dssp CTTCEEEEEECTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999764
No 187
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=89.10 E-value=0.12 Score=44.48 Aligned_cols=18 Identities=28% Similarity=0.661 Sum_probs=15.8
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..+++.|.+||||||++.
T Consensus 8 ~~i~l~G~~GsGKSTva~ 25 (168)
T 1zuh_A 8 QHLVLIGFMGSGKSSLAQ 25 (168)
T ss_dssp CEEEEESCTTSSHHHHHH
T ss_pred ceEEEECCCCCCHHHHHH
Confidence 368999999999999775
No 188
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=89.10 E-value=0.11 Score=44.27 Aligned_cols=18 Identities=17% Similarity=0.257 Sum_probs=15.8
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|+|.+|||||+++.
T Consensus 28 ~~vll~G~~GtGKt~lA~ 45 (143)
T 3co5_A 28 SPVFLTGEAGSPFETVAR 45 (143)
T ss_dssp SCEEEEEETTCCHHHHHG
T ss_pred CcEEEECCCCccHHHHHH
Confidence 458999999999999875
No 189
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=89.01 E-value=0.09 Score=51.88 Aligned_cols=19 Identities=21% Similarity=0.387 Sum_probs=17.1
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|...++.|.||||||||..
T Consensus 170 g~k~~IvG~nGsGKSTLlk 188 (365)
T 1lw7_A 170 AKTVAILGGESSGKSVLVN 188 (365)
T ss_dssp CEEEEEECCTTSHHHHHHH
T ss_pred hCeEEEECCCCCCHHHHHH
Confidence 6789999999999999765
No 190
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=89.00 E-value=0.11 Score=48.53 Aligned_cols=18 Identities=33% Similarity=0.403 Sum_probs=15.7
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|.|++|||||+|+.
T Consensus 65 ~~vLl~G~~GtGKT~la~ 82 (272)
T 1d2n_A 65 VSVLLEGPPHSGKTALAA 82 (272)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred eEEEEECCCCCcHHHHHH
Confidence 358999999999999874
No 191
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=88.90 E-value=0.13 Score=48.93 Aligned_cols=21 Identities=33% Similarity=0.673 Sum_probs=17.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..+..++|.|++|||||||..
T Consensus 43 ~~~~~vli~G~~G~GKTtl~~ 63 (386)
T 2qby_A 43 EKPNNIFIYGLTGTGKTAVVK 63 (386)
T ss_dssp CCCCCEEEEECTTSSHHHHHH
T ss_pred CCCCeEEEECCCCCCHHHHHH
Confidence 345679999999999999864
No 192
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=88.88 E-value=0.12 Score=50.91 Aligned_cols=43 Identities=26% Similarity=0.310 Sum_probs=29.5
Q ss_pred hhhHHHHHHHHhcccCCeeeecccccc-CCCCCEEEEEecCCCCcccccc
Q 013022 304 MKKGLFSVMHYLMPKRQILSLHSGCNM-GKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 304 mKKgifTl~n~~l~~~G~LpmH~sanv-g~~G~valffGLSGTGKTTLSa 352 (451)
+++.+...+.-++.... ++ +. ...+.+++|.|++|+||||+++
T Consensus 79 ~~~~~~~~l~~~l~~~~--~~----~~~~~~~~vi~ivG~~GsGKTTl~~ 122 (306)
T 1vma_A 79 ALESLKEIILEILNFDT--KL----NVPPEPPFVIMVVGVNGTGKTTSCG 122 (306)
T ss_dssp HHHHHHHHHHHHTCSCC--CC----CCCSSSCEEEEEECCTTSSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCC--CC----cccCCCCeEEEEEcCCCChHHHHHH
Confidence 66666666655554322 22 22 3457899999999999999776
No 193
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=88.88 E-value=0.13 Score=54.63 Aligned_cols=21 Identities=43% Similarity=0.502 Sum_probs=18.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.+++|.|+||+|||||..
T Consensus 291 ~~GeVI~LVGpNGSGKTTLl~ 311 (503)
T 2yhs_A 291 KAPFVILMVGVNGVGKTTTIG 311 (503)
T ss_dssp CTTEEEEEECCTTSSHHHHHH
T ss_pred cCCeEEEEECCCcccHHHHHH
Confidence 458899999999999999765
No 194
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=88.85 E-value=0.12 Score=49.50 Aligned_cols=19 Identities=37% Similarity=0.531 Sum_probs=16.5
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|+|++|||||||..
T Consensus 37 ~~~lll~G~~GtGKT~la~ 55 (324)
T 1l8q_A 37 YNPIFIYGSVGTGKTHLLQ 55 (324)
T ss_dssp CSSEEEECSSSSSHHHHHH
T ss_pred CCeEEEECCCCCcHHHHHH
Confidence 4569999999999999874
No 195
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=88.85 E-value=0.16 Score=45.03 Aligned_cols=19 Identities=32% Similarity=0.398 Sum_probs=16.2
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
--.++|+|++|+|||||..
T Consensus 12 ~~~i~~~G~~g~GKTsl~~ 30 (218)
T 1nrj_B 12 QPSIIIAGPQNSGKTSLLT 30 (218)
T ss_dssp CCEEEEECSTTSSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 3569999999999999764
No 196
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=88.82 E-value=0.14 Score=53.98 Aligned_cols=21 Identities=43% Similarity=0.803 Sum_probs=18.9
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||+|||||..
T Consensus 365 ~~G~~~~ivG~sGsGKSTll~ 385 (578)
T 4a82_A 365 EKGETVAFVGMSGGGKSTLIN 385 (578)
T ss_dssp CTTCEEEEECSTTSSHHHHHT
T ss_pred CCCCEEEEECCCCChHHHHHH
Confidence 678999999999999999764
No 197
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=88.81 E-value=0.12 Score=46.62 Aligned_cols=17 Identities=24% Similarity=0.350 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|.+||||||++.
T Consensus 2 ~I~l~G~~GsGKsT~a~ 18 (214)
T 1e4v_A 2 RIILLGAPVAGKGTQAQ 18 (214)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 37899999999999765
No 198
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=88.74 E-value=0.12 Score=50.91 Aligned_cols=21 Identities=33% Similarity=0.442 Sum_probs=17.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|.||+|||||..
T Consensus 169 ~~g~~v~i~G~~GsGKTTll~ 189 (330)
T 2pt7_A 169 AIGKNVIVCGGTGSGKTTYIK 189 (330)
T ss_dssp HHTCCEEEEESTTSCHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 346789999999999999654
No 199
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=88.70 E-value=0.14 Score=46.31 Aligned_cols=18 Identities=50% Similarity=0.580 Sum_probs=15.7
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
.+++|.|.||+|||||..
T Consensus 7 ~~i~i~G~sGsGKTTl~~ 24 (174)
T 1np6_A 7 PLLAFAAWSGTGKTTLLK 24 (174)
T ss_dssp CEEEEECCTTSCHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHH
Confidence 468999999999999754
No 200
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=88.67 E-value=0.085 Score=56.14 Aligned_cols=21 Identities=48% Similarity=0.814 Sum_probs=18.3
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|.+++|.|+||||||||..
T Consensus 367 ~~G~iI~LiG~sGSGKSTLar 387 (552)
T 3cr8_A 367 RQGFTVFFTGLSGAGKSTLAR 387 (552)
T ss_dssp GSCEEEEEEESSCHHHHHHHH
T ss_pred ccceEEEEECCCCChHHHHHH
Confidence 467889999999999999764
No 201
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=88.65 E-value=0.21 Score=55.90 Aligned_cols=34 Identities=21% Similarity=0.388 Sum_probs=24.8
Q ss_pred Ceeeeccc-cccC-------CCCCEEEEEecCCCCccccccc
Q 013022 320 QILSLHSG-CNMG-------KDGDVALFFGLSGTGKTTLSTD 353 (451)
Q Consensus 320 G~LpmH~s-anvg-------~~G~valffGLSGTGKTTLSad 353 (451)
..+-++|+ .+-. +-++-++|.|+||+|||||+.|
T Consensus 14 ~~I~i~gar~hNLkni~v~iP~~~l~viTGvSGSGKSSLafd 55 (842)
T 2vf7_A 14 GFVQVRGARQHNLKDISVKVPRDALVVFTGVSGSGKSSLAFG 55 (842)
T ss_dssp TEEEEEEECSTTCCSEEEEEESSSEEEEESSTTSSHHHHHTT
T ss_pred CeEEEeeccccCCCCeeEEecCCCEEEEECCCCCCHHHHHHH
Confidence 45666666 2222 3477899999999999999874
No 202
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=88.58 E-value=0.13 Score=51.22 Aligned_cols=18 Identities=28% Similarity=0.230 Sum_probs=15.9
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
.+++|.|+||||||||+.
T Consensus 93 ~iigI~GpsGSGKSTl~~ 110 (321)
T 3tqc_A 93 YIIGIAGSVAVGKSTTSR 110 (321)
T ss_dssp EEEEEECCTTSSHHHHHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 369999999999999875
No 203
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=88.56 E-value=0.15 Score=53.88 Aligned_cols=21 Identities=33% Similarity=0.656 Sum_probs=18.8
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|+.+++.|+||+|||||..
T Consensus 367 ~~G~~~~ivG~sGsGKSTll~ 387 (582)
T 3b5x_A 367 PQGKTVALVGRSGSGKSTIAN 387 (582)
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 678899999999999999764
No 204
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=88.55 E-value=0.14 Score=51.37 Aligned_cols=21 Identities=29% Similarity=0.444 Sum_probs=17.9
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++|.|+||+|||||..
T Consensus 134 ~~g~~i~ivG~~GsGKTTll~ 154 (372)
T 2ewv_A 134 RKMGLILVTGPTGSGKSTTIA 154 (372)
T ss_dssp SSSEEEEEECSSSSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 456789999999999999654
No 205
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=88.53 E-value=0.12 Score=48.11 Aligned_cols=20 Identities=30% Similarity=0.514 Sum_probs=16.8
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+..++|+|++|||||+|+.
T Consensus 49 ~~~~vll~G~~GtGKT~la~ 68 (310)
T 1ofh_A 49 TPKNILMIGPTGVGKTEIAR 68 (310)
T ss_dssp CCCCEEEECCTTSSHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHH
Confidence 34569999999999999874
No 206
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=88.47 E-value=0.12 Score=47.22 Aligned_cols=17 Identities=41% Similarity=0.643 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|++||||||++.
T Consensus 2 ~I~l~G~~GsGKsT~a~ 18 (223)
T 2xb4_A 2 NILIFGPNGSGKGTQGN 18 (223)
T ss_dssp EEEEECCTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 37899999999999775
No 207
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=88.44 E-value=0.14 Score=54.87 Aligned_cols=20 Identities=40% Similarity=0.808 Sum_probs=18.2
Q ss_pred CCCCEEEEEecCCCCccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLS 351 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLS 351 (451)
..|+.+++.|+||||||||.
T Consensus 42 ~~Ge~~~liGpNGaGKSTLl 61 (670)
T 3ux8_A 42 PRGKLVVLTGLSGSGKSSLA 61 (670)
T ss_dssp ETTSEEEEECSTTSSHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHh
Confidence 56899999999999999994
No 208
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=88.44 E-value=0.14 Score=54.87 Aligned_cols=20 Identities=40% Similarity=0.574 Sum_probs=18.1
Q ss_pred CCCCEEEEEecCCCCccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLS 351 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLS 351 (451)
+.|..++|.|+||||||||.
T Consensus 346 ~~Ge~vaIiGpnGsGKSTLl 365 (670)
T 3ux8_A 346 PLGTFVAVTGVSGSGKSTLV 365 (670)
T ss_dssp ETTSEEEEECSTTSSHHHHH
T ss_pred cCCCEEEEEeeCCCCHHHHH
Confidence 46889999999999999975
No 209
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=88.42 E-value=0.1 Score=55.20 Aligned_cols=21 Identities=19% Similarity=0.109 Sum_probs=18.4
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|.+++|.|+|||||||++.
T Consensus 393 ~~~~~I~l~GlsGsGKSTIa~ 413 (511)
T 1g8f_A 393 KQGFSIVLGNSLTVSREQLSI 413 (511)
T ss_dssp GCCEEEEECTTCCSCHHHHHH
T ss_pred ccceEEEecccCCCCHHHHHH
Confidence 466789999999999999875
No 210
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=88.39 E-value=0.14 Score=44.97 Aligned_cols=17 Identities=35% Similarity=0.585 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 7 kv~lvG~~g~GKSTLl~ 23 (199)
T 2f9l_A 7 KVVLIGDSGVGKSNLLS 23 (199)
T ss_dssp EEEEESSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 48999999999999753
No 211
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=88.36 E-value=0.14 Score=46.45 Aligned_cols=18 Identities=39% Similarity=0.458 Sum_probs=15.8
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
.+++|.|.||+|||||..
T Consensus 5 ~~i~i~G~sGsGKTTl~~ 22 (169)
T 1xjc_A 5 NVWQVVGYKHSGKTTLME 22 (169)
T ss_dssp CEEEEECCTTSSHHHHHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 468999999999999765
No 212
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=88.36 E-value=0.15 Score=49.28 Aligned_cols=45 Identities=22% Similarity=0.290 Sum_probs=26.4
Q ss_pred hhhhHHHHHHHHhcccCCeeeeccccccCCCCCEEEEEecCCCCcccccc
Q 013022 303 EMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 303 EmKKgifTl~n~~l~~~G~LpmH~sanvg~~G~valffGLSGTGKTTLSa 352 (451)
+.|+.+..+..+.+.....+. ....-...++|+|++|||||+|+.
T Consensus 25 ~~~~~l~~~i~~~~~~~~~~~-----~~~~~~~~vLl~GppGtGKT~la~ 69 (322)
T 3eie_A 25 GAKEALKEAVILPVKFPHLFK-----GNRKPTSGILLYGPPGTGKSYLAK 69 (322)
T ss_dssp HHHHHHHHHTHHHHHCGGGCC-----TTCCCCCEEEEECSSSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHh-----cCCCCCCeEEEECCCCCcHHHHHH
Confidence 466666665544332211111 011223569999999999999874
No 213
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=88.34 E-value=0.16 Score=46.11 Aligned_cols=19 Identities=26% Similarity=0.443 Sum_probs=16.2
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|.|.+||||||++.
T Consensus 5 ~~~I~l~G~~GsGKsT~a~ 23 (217)
T 3be4_A 5 KHNLILIGAPGSGKGTQCE 23 (217)
T ss_dssp CCEEEEEECTTSSHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHH
Confidence 3468999999999999765
No 214
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=88.34 E-value=0.14 Score=47.67 Aligned_cols=18 Identities=17% Similarity=0.194 Sum_probs=16.1
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
.++++.|.+||||||++.
T Consensus 23 ~iI~I~G~~GSGKST~a~ 40 (252)
T 1uj2_A 23 FLIGVSGGTASGKSSVCA 40 (252)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 469999999999999875
No 215
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=88.33 E-value=0.14 Score=44.58 Aligned_cols=17 Identities=41% Similarity=0.606 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.+++.|+||+|||||..
T Consensus 4 kv~ivG~~gvGKStLl~ 20 (184)
T 2zej_A 4 KLMIVGNTGSGKTTLLQ 20 (184)
T ss_dssp EEEEESCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999753
No 216
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=88.30 E-value=0.13 Score=51.01 Aligned_cols=21 Identities=33% Similarity=0.542 Sum_probs=18.4
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|.++.++|++|||||||..
T Consensus 129 ~~G~i~~I~G~~GsGKTTL~~ 149 (349)
T 1pzn_A 129 ETQAITEVFGEFGSGKTQLAH 149 (349)
T ss_dssp ESSEEEEEEESTTSSHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 467889999999999999764
No 217
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=88.26 E-value=0.18 Score=53.59 Aligned_cols=22 Identities=36% Similarity=0.543 Sum_probs=19.2
Q ss_pred CCCCCEEEEEecCCCCcccccc
Q 013022 331 GKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 331 g~~G~valffGLSGTGKTTLSa 352 (451)
-+.|+.+++.|+||+|||||..
T Consensus 378 i~~G~~~~ivG~sGsGKSTll~ 399 (598)
T 3qf4_B 378 IKPGQKVALVGPTGSGKTTIVN 399 (598)
T ss_dssp CCTTCEEEEECCTTSSTTHHHH
T ss_pred EcCCCEEEEECCCCCcHHHHHH
Confidence 3678999999999999999764
No 218
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V
Probab=88.23 E-value=0.16 Score=51.43 Aligned_cols=20 Identities=40% Similarity=0.783 Sum_probs=17.8
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|.+++|.|.||+|||||..
T Consensus 214 ~G~~~~lvG~sG~GKSTLln 233 (358)
T 2rcn_A 214 TGRISIFAGQSGVGKSSLLN 233 (358)
T ss_dssp TTSEEEEECCTTSSHHHHHH
T ss_pred CCCEEEEECCCCccHHHHHH
Confidence 58899999999999999764
No 219
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=88.20 E-value=0.16 Score=51.50 Aligned_cols=20 Identities=30% Similarity=0.610 Sum_probs=17.4
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
...++++.|+|||||||++.
T Consensus 257 ~~~lIil~G~pGSGKSTla~ 276 (416)
T 3zvl_A 257 NPEVVVAVGFPGAGKSTFIQ 276 (416)
T ss_dssp SCCEEEEESCTTSSHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHH
Confidence 34689999999999999876
No 220
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=88.17 E-value=0.14 Score=48.01 Aligned_cols=18 Identities=44% Similarity=0.733 Sum_probs=15.8
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|.|++|||||||+.
T Consensus 48 ~~~ll~G~~GtGKt~la~ 65 (311)
T 4fcw_A 48 GSFLFLGPTGVGKTELAK 65 (311)
T ss_dssp EEEEEESCSSSSHHHHHH
T ss_pred eEEEEECCCCcCHHHHHH
Confidence 369999999999999874
No 221
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=88.12 E-value=0.15 Score=44.89 Aligned_cols=17 Identities=24% Similarity=0.440 Sum_probs=15.4
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
++.+.|.+||||||++.
T Consensus 4 ~i~i~G~~GsGKst~~~ 20 (208)
T 3ake_A 4 IVTIDGPSASGKSSVAR 20 (208)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 68999999999999875
No 222
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=88.08 E-value=0.17 Score=53.30 Aligned_cols=21 Identities=43% Similarity=0.567 Sum_probs=18.9
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.++++.|.||||||||..
T Consensus 45 ~~Ge~~~LvG~NGaGKSTLlk 65 (538)
T 1yqt_A 45 KEGMVVGIVGPNGTGKSTAVK 65 (538)
T ss_dssp CTTSEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999764
No 223
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=88.04 E-value=0.16 Score=41.85 Aligned_cols=17 Identities=29% Similarity=0.556 Sum_probs=14.8
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++++|.+|+|||||..
T Consensus 5 ~i~v~G~~~~GKssl~~ 21 (166)
T 2ce2_X 5 KLVVVGAGGVGKSALTI 21 (166)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999754
No 224
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=88.03 E-value=0.13 Score=49.04 Aligned_cols=20 Identities=45% Similarity=0.791 Sum_probs=17.0
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+..++|.|++|||||||..
T Consensus 43 ~~~~vll~G~~G~GKT~l~~ 62 (387)
T 2v1u_A 43 KPSNALLYGLTGTGKTAVAR 62 (387)
T ss_dssp CCCCEEECBCTTSSHHHHHH
T ss_pred CCCcEEEECCCCCCHHHHHH
Confidence 34579999999999999874
No 225
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=88.03 E-value=0.16 Score=51.85 Aligned_cols=21 Identities=33% Similarity=0.569 Sum_probs=18.3
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..++|+|.||+|||||..
T Consensus 176 ~~Gei~~I~G~sGsGKTTLl~ 196 (400)
T 3lda_A 176 ETGSITELFGEFRTGKSQLCH 196 (400)
T ss_dssp ETTSEEEEEESTTSSHHHHHH
T ss_pred CCCcEEEEEcCCCCChHHHHH
Confidence 457899999999999999764
No 226
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=87.96 E-value=0.16 Score=43.25 Aligned_cols=17 Identities=24% Similarity=0.350 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.+++.|++|+|||||..
T Consensus 5 ~v~lvG~~gvGKStL~~ 21 (165)
T 2wji_A 5 EIALIGNPNVGKSTIFN 21 (165)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999754
No 227
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=87.91 E-value=0.15 Score=49.36 Aligned_cols=16 Identities=50% Similarity=0.821 Sum_probs=14.6
Q ss_pred EEEEecCCCCcccccc
Q 013022 337 ALFFGLSGTGKTTLST 352 (451)
Q Consensus 337 alffGLSGTGKTTLSa 352 (451)
.+|.|++|||||||..
T Consensus 49 ~ll~Gp~G~GKTtla~ 64 (340)
T 1sxj_C 49 LLFYGPPGTGKTSTIV 64 (340)
T ss_dssp EEEECSSSSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 8999999999999764
No 228
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=87.89 E-value=0.15 Score=48.46 Aligned_cols=18 Identities=39% Similarity=0.464 Sum_probs=16.2
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-+++|.|+|||||||++.
T Consensus 10 ~~i~i~G~~GsGKsTla~ 27 (233)
T 3r20_A 10 LVVAVDGPAGTGKSSVSR 27 (233)
T ss_dssp CEEEEECCTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 479999999999999875
No 229
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=87.83 E-value=0.19 Score=46.12 Aligned_cols=20 Identities=35% Similarity=0.552 Sum_probs=17.0
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+..++|.|.+||||||++.
T Consensus 15 ~~~~I~l~G~~GsGKsT~a~ 34 (233)
T 1ak2_A 15 KGVRAVLLGPPGAGKGTQAP 34 (233)
T ss_dssp CCCEEEEECCTTSSHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 34579999999999999765
No 230
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=87.81 E-value=0.17 Score=52.61 Aligned_cols=21 Identities=43% Similarity=0.509 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||||||||..
T Consensus 136 ~~Ge~v~IvGpnGsGKSTLlr 156 (460)
T 2npi_A 136 FEGPRVVIVGGSQTGKTSLSR 156 (460)
T ss_dssp SSCCCEEEEESTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 578899999999999999764
No 231
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=87.79 E-value=0.068 Score=49.44 Aligned_cols=17 Identities=47% Similarity=0.645 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|||||||+.
T Consensus 46 ~vll~G~~GtGKT~la~ 62 (268)
T 2r62_A 46 GVLLVGPPGTGKTLLAK 62 (268)
T ss_dssp CCCCBCSSCSSHHHHHH
T ss_pred eEEEECCCCCcHHHHHH
Confidence 48899999999999874
No 232
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=87.73 E-value=0.15 Score=49.95 Aligned_cols=20 Identities=35% Similarity=0.557 Sum_probs=17.0
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+..++|.|++|||||+++.
T Consensus 50 ~~~~vll~GppGtGKT~la~ 69 (363)
T 3hws_A 50 GKSNILLIGPTGSGKTLLAE 69 (363)
T ss_dssp CCCCEEEECCTTSSHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHH
Confidence 34579999999999999874
No 233
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=87.71 E-value=0.17 Score=49.29 Aligned_cols=19 Identities=42% Similarity=0.579 Sum_probs=16.6
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
...++|+|++|||||+|+.
T Consensus 45 ~~~iLL~GppGtGKT~la~ 63 (322)
T 1xwi_A 45 WRGILLFGPPGTGKSYLAK 63 (322)
T ss_dssp CSEEEEESSSSSCHHHHHH
T ss_pred CceEEEECCCCccHHHHHH
Confidence 4679999999999999874
No 234
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=87.69 E-value=0.18 Score=51.11 Aligned_cols=21 Identities=38% Similarity=0.415 Sum_probs=18.4
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|++|||||||..
T Consensus 167 ~~~~~i~l~G~~GsGKSTl~~ 187 (377)
T 1svm_A 167 PKKRYWLFKGPIDSGKTTLAA 187 (377)
T ss_dssp TTCCEEEEECSTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 457889999999999999775
No 235
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ...
Probab=87.68 E-value=0.16 Score=47.39 Aligned_cols=22 Identities=23% Similarity=0.200 Sum_probs=17.7
Q ss_pred CCCCCEEEEEecCCCCcccccc
Q 013022 331 GKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 331 g~~G~valffGLSGTGKTTLSa 352 (451)
.+.+..++|.|..||||||++.
T Consensus 21 ~~~~~~I~ieG~~GsGKST~~~ 42 (263)
T 1p5z_B 21 GTRIKKISIEGNIAAGKSTFVN 42 (263)
T ss_dssp --CCEEEEEECSTTSSHHHHHT
T ss_pred ccCceEEEEECCCCCCHHHHHH
Confidence 3456679999999999999875
No 236
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=87.64 E-value=0.17 Score=50.82 Aligned_cols=19 Identities=32% Similarity=0.489 Sum_probs=16.1
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|..++|.|+||||||||..
T Consensus 123 ~g~i~I~GptGSGKTTlL~ 141 (356)
T 3jvv_A 123 RGLVLVTGPTGSGKSTTLA 141 (356)
T ss_dssp SEEEEEECSTTSCHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 3479999999999999654
No 237
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=87.63 E-value=0.2 Score=48.15 Aligned_cols=17 Identities=41% Similarity=0.505 Sum_probs=15.5
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|++|||||||..
T Consensus 46 ~~li~G~~G~GKTtl~~ 62 (389)
T 1fnn_A 46 RATLLGRPGTGKTVTLR 62 (389)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred eEEEECCCCCCHHHHHH
Confidence 79999999999999764
No 238
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=87.63 E-value=0.18 Score=49.11 Aligned_cols=18 Identities=50% Similarity=0.698 Sum_probs=15.3
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
.++++.|.||+|||||..
T Consensus 5 ~v~~i~G~~GaGKTTll~ 22 (318)
T 1nij_A 5 AVTLLTGFLGAGKTTLLR 22 (318)
T ss_dssp EEEEEEESSSSSCHHHHH
T ss_pred cEEEEEecCCCCHHHHHH
Confidence 368999999999999653
No 239
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=87.62 E-value=0.19 Score=54.07 Aligned_cols=22 Identities=32% Similarity=0.465 Sum_probs=19.1
Q ss_pred CCCCCEEEEEecCCCCcccccc
Q 013022 331 GKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 331 g~~G~valffGLSGTGKTTLSa 352 (451)
-..|.++++.|+||+|||||..
T Consensus 100 ~~~Gei~~LvGpNGaGKSTLLk 121 (608)
T 3j16_B 100 PRPGQVLGLVGTNGIGKSTALK 121 (608)
T ss_dssp CCTTSEEEEECCTTSSHHHHHH
T ss_pred CCCCCEEEEECCCCChHHHHHH
Confidence 3679999999999999999653
No 240
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=87.29 E-value=0.18 Score=48.32 Aligned_cols=18 Identities=22% Similarity=0.270 Sum_probs=15.7
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|+|++|||||+|+.
T Consensus 37 ~~lLl~GppGtGKT~la~ 54 (293)
T 3t15_A 37 LILGIWGGKGQGKSFQCE 54 (293)
T ss_dssp SEEEEEECTTSCHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 468899999999999875
No 241
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=87.28 E-value=0.2 Score=53.01 Aligned_cols=21 Identities=38% Similarity=0.678 Sum_probs=18.8
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||+|||||..
T Consensus 367 ~~Ge~~~ivG~sGsGKSTll~ 387 (587)
T 3qf4_A 367 KPGSLVAVLGETGSGKSTLMN 387 (587)
T ss_dssp CTTCEEEEECSSSSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999764
No 242
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8
Probab=87.23 E-value=0.095 Score=51.82 Aligned_cols=21 Identities=33% Similarity=0.545 Sum_probs=18.4
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.+++|.|.||+|||||..
T Consensus 171 ~~G~~~~lvG~sG~GKSTLln 191 (307)
T 1t9h_A 171 FQDKTTVFAGQSGVGKSSLLN 191 (307)
T ss_dssp GTTSEEEEEESHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 358999999999999999764
No 243
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=87.20 E-value=0.19 Score=43.04 Aligned_cols=17 Identities=24% Similarity=0.350 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|++|+|||||..
T Consensus 9 ~i~lvG~~gvGKStL~~ 25 (188)
T 2wjg_A 9 EIALIGNPNVGKSTIFN 25 (188)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999764
No 244
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=87.08 E-value=0.2 Score=52.00 Aligned_cols=21 Identities=48% Similarity=0.540 Sum_probs=18.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.++++.|.||||||||..
T Consensus 37 ~~Ge~~~l~G~nGsGKSTL~~ 57 (525)
T 1tf7_A 37 PIGRSTLVSGTSGTGKTLFSI 57 (525)
T ss_dssp ETTSEEEEEESTTSSHHHHHH
T ss_pred CCCeEEEEEcCCCCCHHHHHH
Confidence 468899999999999999764
No 245
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=87.08 E-value=0.19 Score=53.15 Aligned_cols=21 Identities=38% Similarity=0.714 Sum_probs=18.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.++++.|+||||||||..
T Consensus 292 ~~Gei~~i~G~nGsGKSTLl~ 312 (538)
T 3ozx_A 292 KEGEIIGILGPNGIGKTTFAR 312 (538)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 568899999999999999754
No 246
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=87.07 E-value=0.19 Score=41.57 Aligned_cols=16 Identities=31% Similarity=0.650 Sum_probs=14.4
Q ss_pred EEEEEecCCCCccccc
Q 013022 336 VALFFGLSGTGKTTLS 351 (451)
Q Consensus 336 valffGLSGTGKTTLS 351 (451)
.++|+|.+|+|||||.
T Consensus 5 ~i~v~G~~~~GKSsli 20 (167)
T 1kao_A 5 KVVVLGSGGVGKSALT 20 (167)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4899999999999975
No 247
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=86.97 E-value=0.19 Score=41.55 Aligned_cols=17 Identities=29% Similarity=0.599 Sum_probs=14.8
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 6 ~i~v~G~~~~GKssl~~ 22 (168)
T 1u8z_A 6 KVIMVGSGGVGKSALTL 22 (168)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999753
No 248
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=86.95 E-value=0.17 Score=48.48 Aligned_cols=16 Identities=44% Similarity=0.706 Sum_probs=14.7
Q ss_pred EEEEecCCCCcccccc
Q 013022 337 ALFFGLSGTGKTTLST 352 (451)
Q Consensus 337 alffGLSGTGKTTLSa 352 (451)
++|.|++|||||||..
T Consensus 39 ~ll~Gp~G~GKTtl~~ 54 (354)
T 1sxj_E 39 LLLYGPNGTGKKTRCM 54 (354)
T ss_dssp EEEECSTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 8999999999999764
No 249
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=86.94 E-value=0.19 Score=41.79 Aligned_cols=17 Identities=18% Similarity=0.352 Sum_probs=14.8
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++++|.+|+|||||..
T Consensus 7 ~i~v~G~~~~GKssl~~ 23 (168)
T 1z2a_A 7 KMVVVGNGAVGKSSMIQ 23 (168)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 48999999999999754
No 250
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=86.83 E-value=0.19 Score=48.04 Aligned_cols=18 Identities=33% Similarity=0.560 Sum_probs=16.0
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|.|.+||||||++.
T Consensus 76 ~iI~I~G~~GSGKSTva~ 93 (281)
T 2f6r_A 76 YVLGLTGISGSGKSSVAQ 93 (281)
T ss_dssp EEEEEEECTTSCHHHHHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 469999999999999775
No 251
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=86.80 E-value=0.2 Score=41.67 Aligned_cols=16 Identities=19% Similarity=0.478 Sum_probs=14.3
Q ss_pred EEEEEecCCCCccccc
Q 013022 336 VALFFGLSGTGKTTLS 351 (451)
Q Consensus 336 valffGLSGTGKTTLS 351 (451)
.++|+|.+|+|||||.
T Consensus 5 ~i~v~G~~~~GKssli 20 (170)
T 1ek0_A 5 KLVLLGEAAVGKSSIV 20 (170)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4899999999999975
No 252
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=86.76 E-value=0.2 Score=41.77 Aligned_cols=17 Identities=35% Similarity=0.698 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 4 ki~~vG~~~~GKSsli~ 20 (166)
T 3q72_A 4 KVLLLGAPGVGKSALAR 20 (166)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999754
No 253
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=86.72 E-value=0.22 Score=41.27 Aligned_cols=17 Identities=24% Similarity=0.413 Sum_probs=14.8
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++++|.+|+|||||..
T Consensus 3 ki~v~G~~~~GKSsli~ 19 (161)
T 2dyk_A 3 KVVIVGRPNVGKSSLFN 19 (161)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47999999999999754
No 254
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=86.71 E-value=0.2 Score=48.74 Aligned_cols=19 Identities=26% Similarity=0.373 Sum_probs=16.7
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|+|++|||||+|+.
T Consensus 152 ~~~lll~G~~GtGKT~La~ 170 (308)
T 2qgz_A 152 QKGLYLYGDMGIGKSYLLA 170 (308)
T ss_dssp CCEEEEECSTTSSHHHHHH
T ss_pred CceEEEECCCCCCHHHHHH
Confidence 4679999999999999874
No 255
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=86.70 E-value=0.2 Score=52.90 Aligned_cols=29 Identities=28% Similarity=0.334 Sum_probs=22.3
Q ss_pred eeccccccCCCCCEEEEEecCCCCcccccc
Q 013022 323 SLHSGCNMGKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 323 pmH~sanvg~~G~valffGLSGTGKTTLSa 352 (451)
-+|+= .+-+.|.+.++.|++|+|||||..
T Consensus 15 ~l~~l-~~~~~Gei~gLiGpNGaGKSTLlk 43 (538)
T 3ozx_A 15 KLFGL-PTPKNNTILGVLGKNGVGKTTVLK 43 (538)
T ss_dssp EEECC-CCCCTTEEEEEECCTTSSHHHHHH
T ss_pred eecCC-CCCCCCCEEEEECCCCCcHHHHHH
Confidence 34432 345679999999999999999654
No 256
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=86.68 E-value=0.25 Score=47.57 Aligned_cols=19 Identities=53% Similarity=0.728 Sum_probs=16.5
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
...++|.|++|||||||+.
T Consensus 45 ~~~vll~G~~G~GKT~la~ 63 (384)
T 2qby_B 45 KFSNLFLGLTGTGKTFVSK 63 (384)
T ss_dssp CCEEEEEECTTSSHHHHHH
T ss_pred CCcEEEECCCCCCHHHHHH
Confidence 3579999999999999874
No 257
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=86.67 E-value=0.23 Score=51.44 Aligned_cols=21 Identities=38% Similarity=0.518 Sum_probs=17.4
Q ss_pred CCCCE--EEEEecCCCCcccccc
Q 013022 332 KDGDV--ALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~v--alffGLSGTGKTTLSa 352 (451)
+.|.. +++.|.||+|||||..
T Consensus 38 ~~Gei~~vaLvG~nGaGKSTLln 60 (427)
T 2qag_B 38 SQGFCFNILCVGETGLGKSTLMD 60 (427)
T ss_dssp C-CCEEEEEEECSTTSSSHHHHH
T ss_pred cCCCeeEEEEECCCCCCHHHHHH
Confidence 56777 9999999999999764
No 258
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=86.62 E-value=0.2 Score=52.60 Aligned_cols=20 Identities=35% Similarity=0.614 Sum_probs=17.6
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++|+|+||||||||..
T Consensus 107 ~g~~vll~Gp~GtGKTtlar 126 (543)
T 3m6a_A 107 KGPILCLAGPPGVGKTSLAK 126 (543)
T ss_dssp CSCEEEEESSSSSSHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHH
Confidence 46789999999999999864
No 259
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=86.61 E-value=0.2 Score=41.57 Aligned_cols=17 Identities=29% Similarity=0.587 Sum_probs=14.7
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 5 ki~v~G~~~~GKssli~ 21 (167)
T 1c1y_A 5 KLVVLGSGGVGKSALTV 21 (167)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999753
No 260
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=86.58 E-value=0.22 Score=43.02 Aligned_cols=18 Identities=33% Similarity=0.438 Sum_probs=15.7
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++|+|++|+|||||..
T Consensus 49 ~~i~vvG~~g~GKSsll~ 66 (193)
T 2ged_A 49 PSIIIAGPQNSGKTSLLT 66 (193)
T ss_dssp CEEEEECCTTSSHHHHHH
T ss_pred CEEEEECCCCCCHHHHHH
Confidence 469999999999999754
No 261
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=86.54 E-value=0.19 Score=48.13 Aligned_cols=17 Identities=53% Similarity=0.716 Sum_probs=15.3
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|++|||||||+.
T Consensus 57 ~vll~G~~GtGKT~la~ 73 (338)
T 3pfi_A 57 HILFSGPAGLGKTTLAN 73 (338)
T ss_dssp CEEEECSTTSSHHHHHH
T ss_pred eEEEECcCCCCHHHHHH
Confidence 58999999999999874
No 262
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=86.51 E-value=0.21 Score=41.86 Aligned_cols=17 Identities=41% Similarity=0.661 Sum_probs=14.7
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 4 ki~ivG~~~~GKSsli~ 20 (169)
T 3q85_A 4 KVMLVGESGVGKSTLAG 20 (169)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999753
No 263
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=86.46 E-value=0.21 Score=42.13 Aligned_cols=17 Identities=41% Similarity=0.622 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 10 ~i~v~G~~~~GKSsli~ 26 (182)
T 1ky3_A 10 KVIILGDSGVGKTSLMH 26 (182)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999763
No 264
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=86.46 E-value=0.25 Score=45.35 Aligned_cols=20 Identities=20% Similarity=0.214 Sum_probs=17.5
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..+++.|.+||||||++.
T Consensus 15 ~~~~i~i~G~~gsGKst~~~ 34 (236)
T 1q3t_A 15 KTIQIAIDGPASSGKSTVAK 34 (236)
T ss_dssp CCCEEEEECSSCSSHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHH
Confidence 46789999999999999765
No 265
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=86.46 E-value=0.24 Score=55.93 Aligned_cols=22 Identities=32% Similarity=0.655 Sum_probs=19.0
Q ss_pred CCCCEEEEEecCCCCccccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLSTD 353 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSad 353 (451)
+.++-++|.|+||+|||+|+.|
T Consensus 22 p~~~l~v~tG~SGSGKSsLafd 43 (916)
T 3pih_A 22 PKNRLVVITGVSGSGKSSLAMD 43 (916)
T ss_dssp ETTSEEEEEESTTSSSHHHHTT
T ss_pred CCCcEEEEECCCCCcHHHHHHH
Confidence 3467899999999999999874
No 266
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=86.42 E-value=0.23 Score=44.64 Aligned_cols=21 Identities=43% Similarity=0.697 Sum_probs=18.2
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|.+|+|||||+.
T Consensus 28 ~~G~l~~i~G~pG~GKT~l~l 48 (251)
T 2zts_A 28 PEGTTVLLTGGTGTGKTTFAA 48 (251)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred CCCeEEEEEeCCCCCHHHHHH
Confidence 457899999999999999764
No 267
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=86.37 E-value=0.22 Score=41.48 Aligned_cols=17 Identities=41% Similarity=0.561 Sum_probs=14.7
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 5 ~i~v~G~~~~GKssli~ 21 (170)
T 1g16_A 5 KILLIGDSGVGKSCLLV 21 (170)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 48999999999999753
No 268
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=86.34 E-value=0.2 Score=49.43 Aligned_cols=21 Identities=33% Similarity=0.534 Sum_probs=18.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..+.+++|.|++|+||||+++
T Consensus 103 ~~~~vI~ivG~~G~GKTT~~~ 123 (320)
T 1zu4_A 103 NRLNIFMLVGVNGTGKTTSLA 123 (320)
T ss_dssp TSCEEEEEESSTTSSHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 457899999999999999775
No 269
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=86.25 E-value=0.25 Score=53.04 Aligned_cols=21 Identities=52% Similarity=0.615 Sum_probs=18.9
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.++++.|+||+|||||..
T Consensus 115 ~~Ge~~~LiG~NGsGKSTLlk 135 (607)
T 3bk7_A 115 KDGMVVGIVGPNGTGKTTAVK 135 (607)
T ss_dssp CTTSEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECCCCChHHHHHH
Confidence 678999999999999999754
No 270
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=86.10 E-value=0.22 Score=41.60 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=14.5
Q ss_pred EEEEEecCCCCccccc
Q 013022 336 VALFFGLSGTGKTTLS 351 (451)
Q Consensus 336 valffGLSGTGKTTLS 351 (451)
.++++|.+|+|||||.
T Consensus 8 ~i~v~G~~~~GKssli 23 (170)
T 1z08_A 8 KVVLLGEGCVGKTSLV 23 (170)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECcCCCCHHHHH
Confidence 4899999999999975
No 271
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=86.10 E-value=0.23 Score=41.81 Aligned_cols=18 Identities=28% Similarity=0.473 Sum_probs=15.4
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++|+|.+|+|||||..
T Consensus 10 ~~i~v~G~~~~GKssli~ 27 (181)
T 2fn4_A 10 HKLVVVGGGGVGKSALTI 27 (181)
T ss_dssp EEEEEEECTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 359999999999999753
No 272
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=86.09 E-value=0.22 Score=41.78 Aligned_cols=17 Identities=35% Similarity=0.665 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 6 ki~i~G~~~vGKSsl~~ 22 (175)
T 2nzj_A 6 RVVLLGDPGVGKTSLAS 22 (175)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCccHHHHHH
Confidence 48999999999999754
No 273
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=85.91 E-value=0.21 Score=46.28 Aligned_cols=18 Identities=33% Similarity=0.580 Sum_probs=15.8
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|+|.+|||||+|+.
T Consensus 30 ~~vll~G~~GtGKt~la~ 47 (265)
T 2bjv_A 30 KPVLIIGERGTGKELIAS 47 (265)
T ss_dssp SCEEEECCTTSCHHHHHH
T ss_pred CCEEEECCCCCcHHHHHH
Confidence 468999999999999874
No 274
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=85.88 E-value=0.26 Score=42.15 Aligned_cols=18 Identities=33% Similarity=0.490 Sum_probs=15.6
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++++|.+|+|||||..
T Consensus 24 ~~i~v~G~~~~GKSsli~ 41 (195)
T 3pqc_A 24 GEVAFVGRSNVGKSSLLN 41 (195)
T ss_dssp CEEEEEEBTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 469999999999999763
No 275
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=85.85 E-value=0.23 Score=41.28 Aligned_cols=17 Identities=35% Similarity=0.606 Sum_probs=14.8
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++++|.+|+|||||..
T Consensus 5 ~i~v~G~~~~GKssli~ 21 (172)
T 2erx_A 5 RVAVFGAGGVGKSSLVL 21 (172)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999763
No 276
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=85.82 E-value=0.24 Score=41.29 Aligned_cols=17 Identities=41% Similarity=0.563 Sum_probs=14.6
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++++|++|+|||||..
T Consensus 2 ki~~~G~~~~GKssl~~ 18 (164)
T 1r8s_A 2 RILMVGLDAAGKTTILY 18 (164)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999999753
No 277
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=85.81 E-value=0.24 Score=52.78 Aligned_cols=21 Identities=19% Similarity=0.403 Sum_probs=18.0
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.+.+++|.|+|||||||++.
T Consensus 394 q~~~~I~l~GlsGSGKSTiA~ 414 (573)
T 1m8p_A 394 TQGFTIFLTGYMNSGKDAIAR 414 (573)
T ss_dssp TCCEEEEEECSTTSSHHHHHH
T ss_pred ccceEEEeecCCCCCHHHHHH
Confidence 456689999999999999875
No 278
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=85.77 E-value=0.19 Score=47.83 Aligned_cols=16 Identities=50% Similarity=0.711 Sum_probs=14.7
Q ss_pred EEEEecCCCCcccccc
Q 013022 337 ALFFGLSGTGKTTLST 352 (451)
Q Consensus 337 alffGLSGTGKTTLSa 352 (451)
++|+|++|||||+|+.
T Consensus 48 vLl~G~~GtGKT~la~ 63 (350)
T 1g8p_A 48 VLVFGDRGTGKSTAVR 63 (350)
T ss_dssp EEEECCGGGCTTHHHH
T ss_pred EEEECCCCccHHHHHH
Confidence 8999999999999874
No 279
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=85.73 E-value=0.24 Score=41.81 Aligned_cols=17 Identities=29% Similarity=0.602 Sum_probs=14.8
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 9 ~i~v~G~~~~GKSsli~ 25 (177)
T 1wms_A 9 KVILLGDGGVGKSSLMN 25 (177)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999753
No 280
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1
Probab=85.71 E-value=0.24 Score=45.56 Aligned_cols=19 Identities=21% Similarity=0.127 Sum_probs=16.3
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|.|.+|+||||++.
T Consensus 2 ~~~i~~~G~~g~GKtt~~~ 20 (241)
T 2ocp_A 2 PRRLSIEGNIAVGKSTFVK 20 (241)
T ss_dssp CEEEEEEECTTSSHHHHHH
T ss_pred CeEEEEEcCCCCCHHHHHH
Confidence 3468999999999999875
No 281
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=85.68 E-value=0.21 Score=47.07 Aligned_cols=18 Identities=50% Similarity=0.779 Sum_probs=15.9
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|.|++|||||||+.
T Consensus 39 ~~vll~G~~GtGKT~la~ 56 (324)
T 1hqc_A 39 EHLLLFGPPGLGKTTLAH 56 (324)
T ss_dssp CCCEEECCTTCCCHHHHH
T ss_pred CcEEEECCCCCCHHHHHH
Confidence 468999999999999874
No 282
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=85.57 E-value=0.22 Score=48.85 Aligned_cols=19 Identities=32% Similarity=0.566 Sum_probs=16.3
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
...++|+|++|||||||+.
T Consensus 72 ~~~ill~Gp~GtGKT~la~ 90 (376)
T 1um8_A 72 KSNILLIGPTGSGKTLMAQ 90 (376)
T ss_dssp CCCEEEECCTTSSHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHH
Confidence 4569999999999999874
No 283
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=85.55 E-value=0.28 Score=52.78 Aligned_cols=21 Identities=43% Similarity=0.726 Sum_probs=18.3
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.++++.|+||+|||||..
T Consensus 376 ~~GEiv~iiG~NGsGKSTLlk 396 (608)
T 3j16_B 376 SDSEILVMMGENGTGKTTLIK 396 (608)
T ss_dssp CTTCEEEEESCTTSSHHHHHH
T ss_pred ccceEEEEECCCCCcHHHHHH
Confidence 457899999999999999754
No 284
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=85.54 E-value=0.28 Score=48.25 Aligned_cols=21 Identities=38% Similarity=0.542 Sum_probs=17.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
.....++|+|++|||||||+.
T Consensus 115 ~~~~~vLl~GppGtGKT~la~ 135 (357)
T 3d8b_A 115 GPPKGILLFGPPGTGKTLIGK 135 (357)
T ss_dssp SCCSEEEEESSTTSSHHHHHH
T ss_pred CCCceEEEECCCCCCHHHHHH
Confidence 345679999999999999874
No 285
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=85.53 E-value=0.25 Score=49.82 Aligned_cols=20 Identities=35% Similarity=0.649 Sum_probs=17.5
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+.++++.|++|+|||||+.
T Consensus 39 ~~~lIvI~GPTgsGKTtLa~ 58 (339)
T 3a8t_A 39 KEKLLVLMGATGTGKSRLSI 58 (339)
T ss_dssp CCEEEEEECSTTSSHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHH
Confidence 45689999999999999876
No 286
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=85.52 E-value=0.25 Score=41.03 Aligned_cols=17 Identities=29% Similarity=0.470 Sum_probs=14.8
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 8 ~i~v~G~~~~GKssli~ 24 (170)
T 1r2q_A 8 KLVLLGESAVGKSSLVL 24 (170)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999753
No 287
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=85.41 E-value=0.33 Score=41.37 Aligned_cols=17 Identities=29% Similarity=0.501 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 20 ki~v~G~~~~GKSsl~~ 36 (183)
T 3kkq_A 20 KLVVVGDGGVGKSALTI 36 (183)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999754
No 288
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=85.33 E-value=0.26 Score=50.19 Aligned_cols=18 Identities=44% Similarity=0.632 Sum_probs=16.0
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|+|++|||||+|+.
T Consensus 64 ~~iLl~GppGtGKT~la~ 81 (456)
T 2c9o_A 64 RAVLLAGPPGTGKTALAL 81 (456)
T ss_dssp CEEEEECCTTSSHHHHHH
T ss_pred CeEEEECCCcCCHHHHHH
Confidence 469999999999999874
No 289
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=85.33 E-value=0.26 Score=41.23 Aligned_cols=18 Identities=44% Similarity=0.613 Sum_probs=15.5
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++|+|.+|+|||||..
T Consensus 8 ~~i~v~G~~~~GKssl~~ 25 (171)
T 1upt_A 8 MRILILGLDGAGKTTILY 25 (171)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 459999999999999754
No 290
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=85.31 E-value=0.27 Score=41.33 Aligned_cols=17 Identities=41% Similarity=0.604 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 16 ~i~v~G~~~~GKssli~ 32 (179)
T 2y8e_A 16 KLVFLGEQSVGKTSLIT 32 (179)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999754
No 291
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=85.29 E-value=0.28 Score=46.03 Aligned_cols=21 Identities=29% Similarity=0.447 Sum_probs=17.9
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+..++++|+|+.|+||+|++.
T Consensus 27 ~k~kiI~llGpPGsGKgTqa~ 47 (217)
T 3umf_A 27 AKAKVIFVLGGPGSGKGTQCE 47 (217)
T ss_dssp TSCEEEEEECCTTCCHHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHH
Confidence 456789999999999999765
No 292
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=85.27 E-value=0.26 Score=41.90 Aligned_cols=17 Identities=41% Similarity=0.446 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 13 ki~v~G~~~~GKSsli~ 29 (195)
T 3bc1_A 13 KFLALGDSGVGKTSVLY 29 (195)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999753
No 293
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=85.20 E-value=0.28 Score=51.68 Aligned_cols=21 Identities=43% Similarity=0.626 Sum_probs=18.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|++|+|||||..
T Consensus 310 ~~Ge~~~i~G~NGsGKSTLlk 330 (538)
T 1yqt_A 310 KKGEVIGIVGPNGIGKTTFVK 330 (538)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 568899999999999999764
No 294
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=85.08 E-value=0.27 Score=50.42 Aligned_cols=20 Identities=30% Similarity=0.411 Sum_probs=16.4
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++|.|++|+|||||..
T Consensus 166 ~ggii~I~GpnGSGKTTlL~ 185 (418)
T 1p9r_A 166 PHGIILVTGPTGSGKSTTLY 185 (418)
T ss_dssp SSEEEEEECSTTSCHHHHHH
T ss_pred cCCeEEEECCCCCCHHHHHH
Confidence 34568999999999999654
No 295
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=85.08 E-value=0.27 Score=44.92 Aligned_cols=18 Identities=39% Similarity=0.381 Sum_probs=15.9
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
.++++.|.+||||||++.
T Consensus 13 ~iIgltG~~GSGKSTva~ 30 (192)
T 2grj_A 13 MVIGVTGKIGTGKSTVCE 30 (192)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 468999999999999875
No 296
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=85.07 E-value=0.27 Score=40.95 Aligned_cols=17 Identities=24% Similarity=0.438 Sum_probs=14.8
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 8 ~i~v~G~~~~GKSsli~ 24 (170)
T 1z0j_A 8 KVCLLGDTGVGKSSIMW 24 (170)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 48999999999999753
No 297
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=85.05 E-value=0.27 Score=41.42 Aligned_cols=17 Identities=41% Similarity=0.548 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 11 ~i~v~G~~~~GKssl~~ 27 (181)
T 3tw8_B 11 KLLIIGDSGVGKSSLLL 27 (181)
T ss_dssp EEEEECCTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999753
No 298
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=85.02 E-value=0.26 Score=45.73 Aligned_cols=19 Identities=32% Similarity=0.385 Sum_probs=16.8
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|..++|.|++|+||||++.
T Consensus 6 g~~i~~eG~~gsGKsT~~~ 24 (213)
T 4edh_A 6 GLFVTLEGPEGAGKSTNRD 24 (213)
T ss_dssp CEEEEEECSTTSSHHHHHH
T ss_pred ceEEEEEcCCCCCHHHHHH
Confidence 5679999999999999775
No 299
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=84.98 E-value=0.29 Score=55.77 Aligned_cols=22 Identities=41% Similarity=0.724 Sum_probs=18.9
Q ss_pred CCCCEEEEEecCCCCccccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLSTD 353 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSad 353 (451)
+.++-++|.|+||+|||+|+.|
T Consensus 44 P~~~lvv~tG~SGSGKSSLafd 65 (993)
T 2ygr_A 44 PRDALIVFTGLSGSGKSSLAFD 65 (993)
T ss_dssp ESSSEEEEEESTTSSHHHHHTT
T ss_pred cCCCEEEEECCCCCcHHHHHHH
Confidence 3467899999999999999874
No 300
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=84.88 E-value=0.27 Score=42.27 Aligned_cols=17 Identities=29% Similarity=0.556 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 23 ki~vvG~~~~GKSsli~ 39 (190)
T 3con_A 23 KLVVVGAGGVGKSALTI 39 (190)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999764
No 301
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=84.85 E-value=0.28 Score=41.74 Aligned_cols=17 Identities=29% Similarity=0.558 Sum_probs=14.8
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 6 ki~v~G~~~~GKSsli~ 22 (189)
T 4dsu_A 6 KLVVVGADGVGKSALTI 22 (189)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999753
No 302
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=84.84 E-value=0.31 Score=46.25 Aligned_cols=19 Identities=32% Similarity=0.492 Sum_probs=16.9
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|..++|.|++|+||||++.
T Consensus 27 ~~~i~~eG~~GsGKsT~~~ 45 (236)
T 3lv8_A 27 AKFIVIEGLEGAGKSTAIQ 45 (236)
T ss_dssp CCEEEEEESTTSCHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 5679999999999999765
No 303
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=84.81 E-value=0.3 Score=55.53 Aligned_cols=21 Identities=43% Similarity=0.819 Sum_probs=18.5
Q ss_pred CCCEEEEEecCCCCccccccc
Q 013022 333 DGDVALFFGLSGTGKTTLSTD 353 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSad 353 (451)
.++-++|.|+||+|||+|+.|
T Consensus 43 ~~~lvv~tG~SGSGKSSLafd 63 (972)
T 2r6f_A 43 RGKLVVLTGLSGSGKSSLAFD 63 (972)
T ss_dssp TTSEEEEEESTTSSHHHHHTT
T ss_pred CCcEEEEECCCCCCHHHHHHH
Confidence 467899999999999999874
No 304
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=84.78 E-value=0.25 Score=46.91 Aligned_cols=16 Identities=50% Similarity=0.804 Sum_probs=14.6
Q ss_pred EEEEecCCCCcccccc
Q 013022 337 ALFFGLSGTGKTTLST 352 (451)
Q Consensus 337 alffGLSGTGKTTLSa 352 (451)
++|.|++|||||||..
T Consensus 61 ~ll~G~~G~GKT~la~ 76 (353)
T 1sxj_D 61 MLFYGPPGTGKTSTIL 76 (353)
T ss_dssp EEEECSTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 8999999999999764
No 305
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=84.78 E-value=0.31 Score=45.31 Aligned_cols=19 Identities=37% Similarity=0.524 Sum_probs=16.9
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|.-++|.|++|+||||++.
T Consensus 3 g~~i~~eG~~gsGKsT~~~ 21 (213)
T 4tmk_A 3 SKYIVIEGLEGAGKTTARN 21 (213)
T ss_dssp CCEEEEEECTTSCHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 6679999999999999765
No 306
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=84.76 E-value=0.27 Score=41.84 Aligned_cols=19 Identities=42% Similarity=0.550 Sum_probs=16.1
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
.-.++++|++|+|||||..
T Consensus 18 ~~~i~v~G~~~~GKssli~ 36 (183)
T 1moz_A 18 ELRILILGLDGAGKTTILY 36 (183)
T ss_dssp CEEEEEEEETTSSHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHH
Confidence 3469999999999999654
No 307
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=84.67 E-value=0.3 Score=46.03 Aligned_cols=20 Identities=40% Similarity=0.597 Sum_probs=14.8
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++|.|++|+||||++.
T Consensus 24 ~g~~I~~eG~~GsGKsT~~~ 43 (227)
T 3v9p_A 24 RGKFITFEGIDGAGKTTHLQ 43 (227)
T ss_dssp CCCEEEEECCC---CHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 47789999999999999775
No 308
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=84.66 E-value=0.29 Score=41.44 Aligned_cols=17 Identities=29% Similarity=0.599 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 20 ki~v~G~~~~GKSsli~ 36 (187)
T 2a9k_A 20 KVIMVGSGGVGKSALTL 36 (187)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999753
No 309
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=84.63 E-value=0.29 Score=41.72 Aligned_cols=17 Identities=41% Similarity=0.546 Sum_probs=14.7
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++++|.+|+|||||..
T Consensus 3 ki~v~G~~~~GKSsli~ 19 (190)
T 2cxx_A 3 TIIFAGRSNVGKSTLIY 19 (190)
T ss_dssp EEEEEEBTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999999754
No 310
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=84.56 E-value=0.26 Score=48.65 Aligned_cols=18 Identities=39% Similarity=0.665 Sum_probs=15.7
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|+|++|||||+|+.
T Consensus 85 ~~iLL~GppGtGKT~la~ 102 (355)
T 2qp9_X 85 SGILLYGPPGTGKSYLAK 102 (355)
T ss_dssp CCEEEECSTTSCHHHHHH
T ss_pred ceEEEECCCCCcHHHHHH
Confidence 458999999999999874
No 311
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A*
Probab=84.47 E-value=0.29 Score=41.26 Aligned_cols=17 Identities=35% Similarity=0.554 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 8 ki~v~G~~~~GKssl~~ 24 (178)
T 2hxs_A 8 KIVVLGDGASGKTSLTT 24 (178)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 48999999999999754
No 312
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=84.45 E-value=0.29 Score=42.78 Aligned_cols=17 Identities=24% Similarity=0.259 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 22 ki~ivG~~~vGKSsL~~ 38 (184)
T 3ihw_A 22 KVGIVGNLSSGKSALVH 38 (184)
T ss_dssp EEEEECCTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999763
No 313
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ...
Probab=84.43 E-value=0.3 Score=41.43 Aligned_cols=16 Identities=31% Similarity=0.376 Sum_probs=14.5
Q ss_pred EEEEEecCCCCccccc
Q 013022 336 VALFFGLSGTGKTTLS 351 (451)
Q Consensus 336 valffGLSGTGKTTLS 351 (451)
.++|+|.+|+|||||.
T Consensus 7 ~i~~~G~~~~GKssl~ 22 (186)
T 1mh1_A 7 KCVVVGDGAVGKTCLL 22 (186)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4899999999999976
No 314
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=84.41 E-value=0.3 Score=41.31 Aligned_cols=17 Identities=41% Similarity=0.558 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 12 ~i~v~G~~~~GKssli~ 28 (180)
T 2g6b_A 12 KVMLVGDSGVGKTCLLV 28 (180)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999753
No 315
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=84.35 E-value=0.33 Score=41.80 Aligned_cols=19 Identities=21% Similarity=0.198 Sum_probs=16.0
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
--.++++|.+|+|||||..
T Consensus 23 ~~~i~v~G~~~~GKSsli~ 41 (195)
T 1svi_A 23 LPEIALAGRSNVGKSSFIN 41 (195)
T ss_dssp CCEEEEEEBTTSSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 3569999999999999653
No 316
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A*
Probab=84.34 E-value=0.43 Score=50.10 Aligned_cols=18 Identities=39% Similarity=0.610 Sum_probs=16.2
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
.++++.|++|+||||++.
T Consensus 36 ~lIvlvGlpGSGKSTia~ 53 (520)
T 2axn_A 36 TVIVMVGLPARGKTYISK 53 (520)
T ss_dssp EEEEEECCTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 469999999999999876
No 317
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens}
Probab=84.29 E-value=0.3 Score=42.34 Aligned_cols=17 Identities=29% Similarity=0.599 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 16 ki~v~G~~~~GKSsli~ 32 (206)
T 2bov_A 16 KVIMVGSGGVGKSALTL 32 (206)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999753
No 318
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=84.26 E-value=0.29 Score=50.37 Aligned_cols=17 Identities=47% Similarity=0.790 Sum_probs=15.4
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|||||||+.
T Consensus 52 ~vLL~GppGtGKTtlAr 68 (447)
T 3pvs_A 52 SMILWGPPGTGKTTLAE 68 (447)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCcHHHHHH
Confidence 58999999999999875
No 319
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=84.26 E-value=0.32 Score=48.03 Aligned_cols=21 Identities=24% Similarity=0.223 Sum_probs=18.0
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..++|.|.+|+|||||..
T Consensus 53 ~~g~~v~i~G~~GaGKSTLl~ 73 (337)
T 2qm8_A 53 GRAIRVGITGVPGVGKSTTID 73 (337)
T ss_dssp CCSEEEEEECCTTSCHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 457889999999999999653
No 320
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=84.23 E-value=0.3 Score=45.08 Aligned_cols=17 Identities=35% Similarity=0.694 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|+.|+||+|++.
T Consensus 2 ~Iil~GpPGsGKgTqa~ 18 (206)
T 3sr0_A 2 ILVFLGPPGAGKGTQAK 18 (206)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999999775
No 321
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=84.22 E-value=0.33 Score=52.13 Aligned_cols=21 Identities=38% Similarity=0.618 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.++++.|++|+|||||..
T Consensus 380 ~~Gei~~i~G~NGsGKSTLlk 400 (607)
T 3bk7_A 380 RKGEVIGIVGPNGIGKTTFVK 400 (607)
T ss_dssp ETTCEEEEECCTTSSHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 568899999999999999764
No 322
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=84.21 E-value=0.32 Score=45.86 Aligned_cols=22 Identities=41% Similarity=0.572 Sum_probs=18.2
Q ss_pred CCCCCEEEEEecCCCCcccccc
Q 013022 331 GKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 331 g~~G~valffGLSGTGKTTLSa 352 (451)
+..|..++|.|++|+||||++.
T Consensus 18 ~~~~~~i~~~G~~g~GKst~~~ 39 (223)
T 3ld9_A 18 GPGSMFITFEGIDGSGKTTQSH 39 (223)
T ss_dssp -CCCEEEEEECSTTSSHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHH
Confidence 3457789999999999999765
No 323
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=84.20 E-value=0.32 Score=50.53 Aligned_cols=21 Identities=38% Similarity=0.494 Sum_probs=18.1
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|.++++.|++|||||||..
T Consensus 279 ~~G~i~~i~G~~GsGKSTLl~ 299 (525)
T 1tf7_A 279 FKDSIILATGATGTGKTLLVS 299 (525)
T ss_dssp ESSCEEEEEECTTSSHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHH
Confidence 356789999999999999764
No 324
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=84.13 E-value=0.29 Score=49.19 Aligned_cols=19 Identities=26% Similarity=0.372 Sum_probs=16.5
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..+++.|+||+|||||+.
T Consensus 3 ~~~i~i~GptgsGKt~la~ 21 (322)
T 3exa_A 3 EKLVAIVGPTAVGKTKTSV 21 (322)
T ss_dssp CEEEEEECCTTSCHHHHHH
T ss_pred CcEEEEECCCcCCHHHHHH
Confidence 3468999999999999875
No 325
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=84.13 E-value=0.31 Score=40.90 Aligned_cols=17 Identities=29% Similarity=0.415 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 17 ~i~v~G~~~~GKSsli~ 33 (179)
T 1z0f_A 17 KYIIIGDMGVGKSCLLH 33 (179)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999753
No 326
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=84.10 E-value=0.34 Score=41.29 Aligned_cols=17 Identities=41% Similarity=0.487 Sum_probs=9.3
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 10 ki~v~G~~~~GKssl~~ 26 (183)
T 2fu5_C 10 KLLLIGDSGVGKTCVLF 26 (183)
T ss_dssp EEEEECCCCC-------
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999754
No 327
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=84.05 E-value=0.31 Score=50.56 Aligned_cols=45 Identities=29% Similarity=0.458 Sum_probs=26.5
Q ss_pred hhhhHHHHHHHHhcccCCeeeeccccccC-CCCCEEEEEecCCCCcccccc
Q 013022 303 EMKKGLFSVMHYLMPKRQILSLHSGCNMG-KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 303 EmKKgifTl~n~~l~~~G~LpmH~sanvg-~~G~valffGLSGTGKTTLSa 352 (451)
+.|+.+....-+-+.....+. ..| +--+.++|+|++|||||+|+.
T Consensus 188 ~~k~~l~e~v~~pl~~pe~f~-----~~g~~~prGvLLyGPPGTGKTllAk 233 (434)
T 4b4t_M 188 KQIEELVEAIVLPMKRADKFK-----DMGIRAPKGALMYGPPGTGKTLLAR 233 (434)
T ss_dssp HHHHHHHHHTHHHHHCSHHHH-----HHCCCCCCEEEEESCTTSSHHHHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHH-----hCCCCCCCeeEEECcCCCCHHHHHH
Confidence 567776655443332222221 122 123569999999999999874
No 328
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*
Probab=84.01 E-value=0.39 Score=44.91 Aligned_cols=20 Identities=45% Similarity=0.589 Sum_probs=17.6
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++|.|++|+||||++.
T Consensus 4 ~g~~i~~eG~~g~GKst~~~ 23 (216)
T 3tmk_A 4 RGKLILIEGLDRTGKTTQCN 23 (216)
T ss_dssp CCCEEEEEECSSSSHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 46789999999999999765
No 329
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=84.00 E-value=0.32 Score=51.12 Aligned_cols=21 Identities=29% Similarity=0.313 Sum_probs=17.1
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++|.|++|||||||..
T Consensus 258 ~~g~~i~I~GptGSGKTTlL~ 278 (511)
T 2oap_1 258 EHKFSAIVVGETASGKTTTLN 278 (511)
T ss_dssp HTTCCEEEEESTTSSHHHHHH
T ss_pred hCCCEEEEECCCCCCHHHHHH
Confidence 346679999999999999643
No 330
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=84.00 E-value=0.31 Score=41.20 Aligned_cols=16 Identities=31% Similarity=0.574 Sum_probs=14.5
Q ss_pred EEEEEecCCCCccccc
Q 013022 336 VALFFGLSGTGKTTLS 351 (451)
Q Consensus 336 valffGLSGTGKTTLS 351 (451)
.++|+|.+|+|||||.
T Consensus 14 ki~v~G~~~~GKSsli 29 (181)
T 2efe_B 14 KLVLLGDVGAGKSSLV 29 (181)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECcCCCCHHHHH
Confidence 4999999999999975
No 331
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A*
Probab=83.92 E-value=0.33 Score=42.08 Aligned_cols=18 Identities=44% Similarity=0.578 Sum_probs=15.6
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++|+|++|+|||||..
T Consensus 17 ~ki~ivG~~~vGKSsL~~ 34 (181)
T 1fzq_A 17 VRILLLGLDNAGKTTLLK 34 (181)
T ss_dssp EEEEEEESTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 469999999999999754
No 332
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=83.91 E-value=0.33 Score=41.28 Aligned_cols=16 Identities=25% Similarity=0.509 Sum_probs=14.5
Q ss_pred EEEEEecCCCCccccc
Q 013022 336 VALFFGLSGTGKTTLS 351 (451)
Q Consensus 336 valffGLSGTGKTTLS 351 (451)
.++|+|.+|+|||||.
T Consensus 8 ki~~~G~~~~GKSsli 23 (181)
T 3t5g_A 8 KIAILGYRSVGKSSLT 23 (181)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECcCCCCHHHHH
Confidence 4899999999999974
No 333
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=83.89 E-value=0.33 Score=48.03 Aligned_cols=20 Identities=40% Similarity=0.612 Sum_probs=17.2
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
....++|+|++|||||+|+.
T Consensus 147 ~~~~vLL~GppGtGKT~la~ 166 (389)
T 3vfd_A 147 PARGLLLFGPPGNGKTMLAK 166 (389)
T ss_dssp CCSEEEEESSTTSCHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHH
Confidence 35679999999999999774
No 334
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*
Probab=83.87 E-value=0.32 Score=41.51 Aligned_cols=17 Identities=29% Similarity=0.415 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 16 ki~vvG~~~~GKssL~~ 32 (198)
T 3t1o_A 16 KIVYYGPGLSGKTTNLK 32 (198)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999754
No 335
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=83.86 E-value=0.29 Score=51.85 Aligned_cols=19 Identities=37% Similarity=0.564 Sum_probs=16.5
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|..++|+|+||||||||+.
T Consensus 60 g~~vll~Gp~GtGKTtlar 78 (604)
T 3k1j_A 60 KRHVLLIGEPGTGKSMLGQ 78 (604)
T ss_dssp TCCEEEECCTTSSHHHHHH
T ss_pred CCEEEEEeCCCCCHHHHHH
Confidence 3579999999999999874
No 336
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=83.69 E-value=0.32 Score=42.02 Aligned_cols=17 Identities=41% Similarity=0.628 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 27 ki~v~G~~~~GKSsLi~ 43 (193)
T 2oil_A 27 KVVLIGESGVGKTNLLS 43 (193)
T ss_dssp EEEEESSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999764
No 337
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A*
Probab=83.64 E-value=0.35 Score=41.24 Aligned_cols=17 Identities=41% Similarity=0.536 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 12 ki~v~G~~~~GKSsli~ 28 (186)
T 2bme_A 12 KFLVIGNAGTGKSCLLH 28 (186)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999764
No 338
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=83.60 E-value=0.32 Score=48.56 Aligned_cols=18 Identities=28% Similarity=0.517 Sum_probs=16.0
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..+++.|+||+|||||+.
T Consensus 6 ~~i~i~GptGsGKTtla~ 23 (323)
T 3crm_A 6 PAIFLMGPTAAGKTDLAM 23 (323)
T ss_dssp EEEEEECCTTSCHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 368999999999999875
No 339
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=83.54 E-value=0.37 Score=48.00 Aligned_cols=20 Identities=35% Similarity=0.579 Sum_probs=17.6
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++++|.+|+|||||+.
T Consensus 60 ~G~iv~I~G~pGsGKTtLal 79 (349)
T 2zr9_A 60 RGRVIEIYGPESSGKTTVAL 79 (349)
T ss_dssp TTSEEEEEESTTSSHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 46789999999999999864
No 340
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927}
Probab=83.50 E-value=0.37 Score=41.56 Aligned_cols=18 Identities=33% Similarity=0.492 Sum_probs=15.7
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|+|.+|+|||||..
T Consensus 18 ~ki~v~G~~~~GKSsl~~ 35 (199)
T 4bas_A 18 LQVVMCGLDNSGKTTIIN 35 (199)
T ss_dssp EEEEEECCTTSCHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 459999999999999764
No 341
>3bwd_D RAC-like GTP-binding protein ARAC6; G domain, cytoplasm, lipoprotein, membrane, methylation, nucleotide-binding, prenylation, ----; HET: GDP; 1.53A {Arabidopsis thaliana} PDB: 2nty_C* 2wbl_C
Probab=83.49 E-value=0.34 Score=41.00 Aligned_cols=18 Identities=28% Similarity=0.211 Sum_probs=15.4
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++|+|.+|+|||||..
T Consensus 9 ~ki~v~G~~~~GKssl~~ 26 (182)
T 3bwd_D 9 IKCVTVGDGAVGKTCLLI 26 (182)
T ss_dssp CEEEEECSTTSSHHHHHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 458999999999999753
No 342
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=83.45 E-value=0.38 Score=46.79 Aligned_cols=21 Identities=38% Similarity=0.616 Sum_probs=18.4
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++|+|.+|+|||||+.
T Consensus 105 ~~G~i~~i~G~~GsGKT~la~ 125 (324)
T 2z43_A 105 ETRTMTEFFGEFGSGKTQLCH 125 (324)
T ss_dssp ETTSEEEEEESTTSSHHHHHH
T ss_pred CCCcEEEEECCCCCCHhHHHH
Confidence 457899999999999999764
No 343
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=83.37 E-value=0.36 Score=52.38 Aligned_cols=20 Identities=50% Similarity=0.675 Sum_probs=17.5
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..++|.|+|||||||++.
T Consensus 51 ~g~lIvLtGlsGSGKSTlAr 70 (630)
T 1x6v_B 51 RGCTVWLTGLSGAGKTTVSM 70 (630)
T ss_dssp CCEEEEEECSTTSSHHHHHH
T ss_pred CCCEEEEEeCCCCCHHHHHH
Confidence 46679999999999999775
No 344
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=83.36 E-value=0.34 Score=48.79 Aligned_cols=18 Identities=33% Similarity=0.464 Sum_probs=16.1
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
.++++.|+||+|||||+.
T Consensus 8 ~lI~I~GptgSGKTtla~ 25 (340)
T 3d3q_A 8 FLIVIVGPTASGKTELSI 25 (340)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred ceEEEECCCcCcHHHHHH
Confidence 478999999999999885
No 345
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=83.33 E-value=0.33 Score=42.92 Aligned_cols=18 Identities=44% Similarity=0.676 Sum_probs=15.3
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++++|++|+|||||..
T Consensus 26 ~ki~lvG~~~vGKSsLi~ 43 (198)
T 1f6b_A 26 GKLVFLGLDNAGKTTLLH 43 (198)
T ss_dssp EEEEEEEETTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 358999999999999654
No 346
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=83.32 E-value=0.37 Score=43.98 Aligned_cols=17 Identities=24% Similarity=0.507 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 31 ~i~lvG~~g~GKStlin 47 (239)
T 3lxx_A 31 RIVLVGKTGAGKSATGN 47 (239)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999654
No 347
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=83.27 E-value=0.21 Score=47.74 Aligned_cols=19 Identities=32% Similarity=0.394 Sum_probs=16.2
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|..++|+|++|||||+|+.
T Consensus 46 ~~~vll~G~pGtGKT~la~ 64 (331)
T 2r44_A 46 GGHILLEGVPGLAKTLSVN 64 (331)
T ss_dssp TCCEEEESCCCHHHHHHHH
T ss_pred CCeEEEECCCCCcHHHHHH
Confidence 3469999999999999864
No 348
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens}
Probab=83.27 E-value=0.35 Score=42.75 Aligned_cols=17 Identities=41% Similarity=0.661 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|++|+|||||..
T Consensus 25 ki~vvG~~~vGKSsLi~ 41 (195)
T 3cbq_A 25 KVMLVGESGVGKSTLAG 41 (195)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999754
No 349
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=83.25 E-value=0.36 Score=49.27 Aligned_cols=19 Identities=42% Similarity=0.579 Sum_probs=16.5
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
...++|+|++|||||+|+.
T Consensus 167 ~~~vLL~GppGtGKT~lA~ 185 (444)
T 2zan_A 167 WRGILLFGPPGTGKSYLAK 185 (444)
T ss_dssp CSEEEEECSTTSSHHHHHH
T ss_pred CceEEEECCCCCCHHHHHH
Confidence 3579999999999999874
No 350
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=83.23 E-value=0.36 Score=41.09 Aligned_cols=17 Identities=24% Similarity=0.479 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 9 ki~v~G~~~~GKSsli~ 25 (208)
T 3clv_A 9 KTVLLGESSVGKSSIVL 25 (208)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999753
No 351
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=83.12 E-value=0.33 Score=49.55 Aligned_cols=19 Identities=32% Similarity=0.417 Sum_probs=16.4
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
...++|+|++|||||||..
T Consensus 130 ~~~lll~Gp~G~GKTtLa~ 148 (440)
T 2z4s_A 130 YNPLFIYGGVGLGKTHLLQ 148 (440)
T ss_dssp SCCEEEECSSSSSHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHH
Confidence 4569999999999999874
No 352
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=83.08 E-value=0.36 Score=46.77 Aligned_cols=17 Identities=41% Similarity=0.581 Sum_probs=14.5
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.+++.|+||+|||||..
T Consensus 20 ~I~lvG~nG~GKSTLl~ 36 (301)
T 2qnr_A 20 TLMVVGESGLGKSTLIN 36 (301)
T ss_dssp EEEEEEETTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 36999999999999653
No 353
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=83.06 E-value=0.4 Score=42.73 Aligned_cols=18 Identities=39% Similarity=0.451 Sum_probs=15.6
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
.+++|.|.+|+|||||..
T Consensus 39 ~~i~ivG~~gvGKTtl~~ 56 (226)
T 2hf9_A 39 VAFDFMGAIGSGKTLLIE 56 (226)
T ss_dssp EEEEEEESTTSSHHHHHH
T ss_pred eEEEEEcCCCCCHHHHHH
Confidence 468899999999999764
No 354
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=83.04 E-value=0.38 Score=50.54 Aligned_cols=18 Identities=33% Similarity=0.370 Sum_probs=16.2
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
.++++.|+||+|||||..
T Consensus 30 e~~~liG~nGsGKSTLl~ 47 (483)
T 3euj_A 30 LVTTLSGGNGAGKSTTMA 47 (483)
T ss_dssp SEEEEECCTTSSHHHHHH
T ss_pred ceEEEECCCCCcHHHHHH
Confidence 899999999999999653
No 355
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=83.04 E-value=0.36 Score=50.11 Aligned_cols=45 Identities=31% Similarity=0.484 Sum_probs=26.7
Q ss_pred hhhhHHHHHHHHhcccCCeeeeccccccC-CCCCEEEEEecCCCCcccccc
Q 013022 303 EMKKGLFSVMHYLMPKRQILSLHSGCNMG-KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 303 EmKKgifTl~n~~l~~~G~LpmH~sanvg-~~G~valffGLSGTGKTTLSa 352 (451)
+.|+.+-...-+-+.....+. ..| +--+.++|+|++|||||+|+.
T Consensus 188 ~~k~~l~e~v~~pl~~p~~f~-----~~g~~~prGvLL~GPPGtGKTllAk 233 (437)
T 4b4t_L 188 EQIRELREVIELPLKNPEIFQ-----RVGIKPPKGVLLYGPPGTGKTLLAK 233 (437)
T ss_dssp HHHHHHHHHHHHHHHCHHHHH-----HHCCCCCCEEEEESCTTSSHHHHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHH-----hCCCCCCCeEEEECCCCCcHHHHHH
Confidence 567776665544332222221 112 123569999999999999874
No 356
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=82.99 E-value=0.35 Score=49.96 Aligned_cols=45 Identities=22% Similarity=0.375 Sum_probs=27.5
Q ss_pred hhhhHHHHHHHHhcccCCeeeeccccccC-CCCCEEEEEecCCCCcccccc
Q 013022 303 EMKKGLFSVMHYLMPKRQILSLHSGCNMG-KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 303 EmKKgifTl~n~~l~~~G~LpmH~sanvg-~~G~valffGLSGTGKTTLSa 352 (451)
+.|+.+.....+.+....++. ..| +--+.++|+|++|||||+|+.
T Consensus 179 ~~k~~l~e~v~~pl~~p~~~~-----~~g~~~prGiLL~GPPGtGKT~lak 224 (428)
T 4b4t_K 179 MQKQEIREAVELPLVQADLYE-----QIGIDPPRGVLLYGPPGTGKTMLVK 224 (428)
T ss_dssp HHHHHHHHHHHHHHHCHHHHH-----HHCCCCCCEEEEESCTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHH-----hCCCCCCceEEEECCCCCCHHHHHH
Confidence 577777666554333222221 112 123569999999999999874
No 357
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=82.97 E-value=0.4 Score=42.57 Aligned_cols=18 Identities=33% Similarity=0.403 Sum_probs=15.7
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
.+++|.|.+|+|||||..
T Consensus 31 ~~i~i~G~~g~GKTTl~~ 48 (221)
T 2wsm_A 31 VAVNIMGAIGSGKTLLIE 48 (221)
T ss_dssp EEEEEEECTTSCHHHHHH
T ss_pred eEEEEEcCCCCCHHHHHH
Confidence 469999999999999764
No 358
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=82.96 E-value=0.36 Score=47.55 Aligned_cols=21 Identities=38% Similarity=0.385 Sum_probs=18.3
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++|+|.+|+|||||+.
T Consensus 120 ~~G~i~~I~G~~GsGKTtla~ 140 (343)
T 1v5w_A 120 ESMAITEAFGEFRTGKTQLSH 140 (343)
T ss_dssp CSSEEEEEECCTTCTHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 457889999999999999764
No 359
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=82.92 E-value=0.37 Score=41.41 Aligned_cols=17 Identities=41% Similarity=0.528 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 18 ki~v~G~~~~GKSsli~ 34 (196)
T 3tkl_A 18 KLLLIGDSGVGKSCLLL 34 (196)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999753
No 360
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=82.90 E-value=0.38 Score=41.44 Aligned_cols=17 Identities=35% Similarity=0.341 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 9 ki~v~G~~~vGKSsli~ 25 (184)
T 1m7b_A 9 KIVVVGDSQCGKTALLH 25 (184)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999754
No 361
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=82.88 E-value=0.37 Score=41.62 Aligned_cols=17 Identities=35% Similarity=0.432 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 22 ki~v~G~~~~GKSsli~ 38 (189)
T 1z06_A 22 KIIVIGDSNVGKTCLTY 38 (189)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999753
No 362
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=82.86 E-value=0.36 Score=48.68 Aligned_cols=20 Identities=40% Similarity=0.669 Sum_probs=17.3
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|.+++++|++|+|||||+.
T Consensus 60 ~G~i~~I~GppGsGKSTLal 79 (356)
T 3hr8_A 60 RGRIVEIFGQESSGKTTLAL 79 (356)
T ss_dssp TTEEEEEEESTTSSHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHH
Confidence 35789999999999999764
No 363
>2h57_A ADP-ribosylation factor-like protein 6; GTP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GTP; 2.00A {Homo sapiens}
Probab=82.67 E-value=0.4 Score=41.48 Aligned_cols=18 Identities=39% Similarity=0.551 Sum_probs=15.5
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++|+|.+|+|||||..
T Consensus 22 ~ki~v~G~~~~GKSsli~ 39 (190)
T 2h57_A 22 VHVLCLGLDNSGKTTIIN 39 (190)
T ss_dssp EEEEEEECTTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 459999999999999753
No 364
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=82.55 E-value=0.4 Score=41.57 Aligned_cols=17 Identities=35% Similarity=0.409 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 25 ki~v~G~~~~GKSsli~ 41 (191)
T 3dz8_A 25 KLLIIGNSSVGKTSFLF 41 (191)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCcCHHHHHH
Confidence 49999999999999754
No 365
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=82.54 E-value=0.4 Score=41.28 Aligned_cols=18 Identities=33% Similarity=0.577 Sum_probs=15.3
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++|+|.+|+|||||..
T Consensus 9 ~ki~vvG~~~~GKSsli~ 26 (199)
T 2gf0_A 9 YRVVVFGAGGVGKSSLVL 26 (199)
T ss_dssp EEEEEEECTTSSHHHHHH
T ss_pred eEEEEECCCCCcHHHHHH
Confidence 359999999999999743
No 366
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=82.38 E-value=0.45 Score=48.89 Aligned_cols=18 Identities=22% Similarity=0.326 Sum_probs=15.6
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++|.|.||+|||||-.
T Consensus 70 ~~valvG~nGaGKSTLln 87 (413)
T 1tq4_A 70 LNVAVTGETGSGKSSFIN 87 (413)
T ss_dssp EEEEEEECTTSSHHHHHH
T ss_pred eEEEEECCCCCcHHHHHH
Confidence 379999999999999753
No 367
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=82.37 E-value=0.4 Score=41.78 Aligned_cols=17 Identities=29% Similarity=0.534 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 23 ki~vvG~~~vGKTsLi~ 39 (187)
T 3c5c_A 23 NLAILGRRGAGKSALTV 39 (187)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCcHHHHHH
Confidence 49999999999999763
No 368
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=82.37 E-value=0.36 Score=45.10 Aligned_cols=17 Identities=47% Similarity=0.593 Sum_probs=15.2
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|++||||||++.
T Consensus 48 ~~ll~G~~G~GKT~la~ 64 (327)
T 1iqp_A 48 HLLFAGPPGVGKTTAAL 64 (327)
T ss_dssp EEEEESCTTSSHHHHHH
T ss_pred eEEEECcCCCCHHHHHH
Confidence 48999999999999874
No 369
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=82.22 E-value=0.48 Score=43.41 Aligned_cols=19 Identities=37% Similarity=0.566 Sum_probs=16.6
Q ss_pred CCCCEEEEEecCCCCcccc
Q 013022 332 KDGDVALFFGLSGTGKTTL 350 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTL 350 (451)
..|+.+++.|.+||||||+
T Consensus 74 ~~g~~~~i~g~TGsGKTt~ 92 (235)
T 3llm_A 74 SQNSVVIIRGATGCGKTTQ 92 (235)
T ss_dssp HHCSEEEEECCTTSSHHHH
T ss_pred hcCCEEEEEeCCCCCcHHh
Confidence 3578899999999999984
No 370
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=82.21 E-value=0.38 Score=44.82 Aligned_cols=17 Identities=47% Similarity=0.606 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++||||||++.
T Consensus 40 ~~ll~G~~G~GKt~la~ 56 (319)
T 2chq_A 40 HLLFSGPPGTGKTATAI 56 (319)
T ss_dssp CEEEESSSSSSHHHHHH
T ss_pred eEEEECcCCcCHHHHHH
Confidence 38999999999999764
No 371
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=82.15 E-value=0.41 Score=40.98 Aligned_cols=19 Identities=37% Similarity=0.480 Sum_probs=16.0
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
.-.++++|++|+|||||..
T Consensus 18 ~~~i~v~G~~~~GKssl~~ 36 (186)
T 1ksh_A 18 ELRLLMLGLDNAGKTTILK 36 (186)
T ss_dssp CEEEEEECSTTSSHHHHHH
T ss_pred eeEEEEECCCCCCHHHHHH
Confidence 3469999999999999754
No 372
>2fh5_B SR-beta, signal recognition particle receptor beta subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Mus musculus} SCOP: c.37.1.8 PDB: 2go5_2
Probab=82.14 E-value=0.44 Score=41.96 Aligned_cols=18 Identities=44% Similarity=0.658 Sum_probs=15.6
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|+|++|+|||||..
T Consensus 8 ~ki~vvG~~~~GKTsli~ 25 (214)
T 2fh5_B 8 RAVLFVGLCDSGKTLLFV 25 (214)
T ss_dssp CEEEEECSTTSSHHHHHH
T ss_pred CEEEEECCCCCCHHHHHH
Confidence 469999999999999764
No 373
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=82.14 E-value=0.36 Score=46.78 Aligned_cols=20 Identities=40% Similarity=0.705 Sum_probs=17.9
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|.+++|.|.+|+||||++.
T Consensus 97 ~~~~i~i~g~~G~GKTT~~~ 116 (295)
T 1ls1_A 97 DRNLWFLVGLQGSGKTTTAA 116 (295)
T ss_dssp SSEEEEEECCTTTTHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 67889999999999999775
No 374
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=82.12 E-value=0.3 Score=50.59 Aligned_cols=20 Identities=30% Similarity=0.456 Sum_probs=17.6
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.+.+++|.|++|+||||+++
T Consensus 96 ~~~vI~lvG~~GsGKTTt~~ 115 (433)
T 3kl4_A 96 LPFIIMLVGVQGSGKTTTAG 115 (433)
T ss_dssp SSEEEEECCCTTSCHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 46789999999999999775
No 375
>3l0i_B RAS-related protein RAB-1A; GEF-GDF-RAB complex, GTP-binding, guanine-nucleotide exchang GDI-displacement factor; 2.85A {Homo sapiens}
Probab=82.11 E-value=0.49 Score=41.39 Aligned_cols=17 Identities=41% Similarity=0.528 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 35 ki~vvG~~~~GKSsli~ 51 (199)
T 3l0i_B 35 KLLLIGDSGVGKSCLLL 51 (199)
T ss_dssp EEEEECCTTSCCTTTTT
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999764
No 376
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=82.08 E-value=0.42 Score=41.30 Aligned_cols=17 Identities=35% Similarity=0.428 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 24 ki~vvG~~~~GKSsli~ 40 (189)
T 2gf9_A 24 KLLLIGNSSVGKTSFLF 40 (189)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999764
No 377
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=82.08 E-value=0.4 Score=46.10 Aligned_cols=21 Identities=33% Similarity=0.544 Sum_probs=18.2
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..++|+|.+|+|||||+.
T Consensus 96 ~~g~i~~i~G~~gsGKT~la~ 116 (322)
T 2i1q_A 96 ESQSVTEFAGVFGSGKTQIMH 116 (322)
T ss_dssp ETTEEEEEEESTTSSHHHHHH
T ss_pred cCCeEEEEECCCCCCHHHHHH
Confidence 456789999999999999875
No 378
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=82.07 E-value=0.34 Score=41.13 Aligned_cols=17 Identities=24% Similarity=0.264 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 9 ki~~vG~~~vGKTsli~ 25 (178)
T 2iwr_A 9 RLGVLGDARSGKSSLIH 25 (178)
T ss_dssp EEEEECCGGGCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999764
No 379
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=81.92 E-value=0.4 Score=48.04 Aligned_cols=19 Identities=26% Similarity=0.510 Sum_probs=16.6
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
...+++.|+||+|||||+.
T Consensus 10 ~~~i~i~GptgsGKt~la~ 28 (316)
T 3foz_A 10 PKAIFLMGPTASGKTALAI 28 (316)
T ss_dssp CEEEEEECCTTSCHHHHHH
T ss_pred CcEEEEECCCccCHHHHHH
Confidence 3578999999999999886
No 380
>1sky_E F1-ATPase, F1-ATP synthase; F1FO ATP synthase, alpha3BETA3 SUBC F1-ATPase, hydrolase; 3.20A {Bacillus SP} SCOP: a.69.1.1 b.49.1.1 c.37.1.11
Probab=81.88 E-value=0.47 Score=49.93 Aligned_cols=19 Identities=42% Similarity=0.583 Sum_probs=16.9
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|..++|||.||+|||||..
T Consensus 151 Gq~~~i~G~sGvGKTtL~~ 169 (473)
T 1sky_E 151 GGKIGLFGGAGVGKTVLIQ 169 (473)
T ss_dssp TCEEEEECCSSSCHHHHHH
T ss_pred CCEEEEECCCCCCccHHHH
Confidence 5679999999999999875
No 381
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=81.87 E-value=0.44 Score=41.71 Aligned_cols=17 Identities=29% Similarity=0.604 Sum_probs=15.1
Q ss_pred CEEEEEecCCCCccccc
Q 013022 335 DVALFFGLSGTGKTTLS 351 (451)
Q Consensus 335 ~valffGLSGTGKTTLS 351 (451)
-.++|+|++|+|||||.
T Consensus 21 ~ki~~vG~~~vGKTsLi 37 (196)
T 3llu_A 21 PRILLMGLRRSGKSSIQ 37 (196)
T ss_dssp CEEEEEESTTSSHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 45999999999999983
No 382
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B*
Probab=81.81 E-value=0.44 Score=41.68 Aligned_cols=20 Identities=45% Similarity=0.630 Sum_probs=15.6
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
....+++.|++|+|||||..
T Consensus 22 ~~~ki~~vG~~~vGKSsli~ 41 (190)
T 1m2o_B 22 KHGKLLFLGLDNAGKTTLLH 41 (190)
T ss_dssp --CEEEEEESTTSSHHHHHH
T ss_pred CccEEEEECCCCCCHHHHHH
Confidence 33468999999999999754
No 383
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B*
Probab=81.77 E-value=0.43 Score=41.48 Aligned_cols=17 Identities=41% Similarity=0.638 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 10 ki~v~G~~~~GKSsli~ 26 (207)
T 1vg8_A 10 KVIILGDSGVGKTSLMN 26 (207)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 58999999999999754
No 384
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=81.76 E-value=0.49 Score=40.77 Aligned_cols=18 Identities=33% Similarity=0.527 Sum_probs=15.6
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++++|++|+|||||..
T Consensus 17 ~~i~v~G~~~~GKssl~~ 34 (187)
T 1zj6_A 17 HKVIIVGLDNAGKTTILY 34 (187)
T ss_dssp EEEEEEESTTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 469999999999999764
No 385
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=81.73 E-value=0.44 Score=41.55 Aligned_cols=17 Identities=35% Similarity=0.417 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 10 ki~v~G~~~~GKSsli~ 26 (203)
T 1zbd_A 10 KILIIGNSSVGKTSFLF 26 (203)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999763
No 386
>3reg_A RHO-like small GTPase; cytoskeleton, nucleotide-binding, GTP-binding, signaling Pro lipoprotein, prenylation; HET: GSP; 1.80A {Entamoeba histolytica} PDB: 3ref_B* 4dvg_A*
Probab=81.61 E-value=0.44 Score=41.30 Aligned_cols=17 Identities=29% Similarity=0.304 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 25 ki~~vG~~~~GKSsl~~ 41 (194)
T 3reg_A 25 KIVVVGDGAVGKTCLLL 41 (194)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999764
No 387
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=81.55 E-value=0.46 Score=41.66 Aligned_cols=17 Identities=29% Similarity=0.515 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 26 ki~vvG~~~~GKSsli~ 42 (201)
T 3oes_A 26 KVVILGYRCVGKTSLAH 42 (201)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCcCHHHHHH
Confidence 49999999999999764
No 388
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=81.53 E-value=0.43 Score=41.04 Aligned_cols=18 Identities=33% Similarity=0.527 Sum_probs=15.5
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++|+|.+|+|||||..
T Consensus 22 ~~i~v~G~~~~GKSsli~ 39 (181)
T 2h17_A 22 HKVIIVGLDNAGKTTILY 39 (181)
T ss_dssp EEEEEEEETTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 459999999999999754
No 389
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=81.51 E-value=0.46 Score=41.33 Aligned_cols=17 Identities=24% Similarity=0.505 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 25 ki~vvG~~~~GKSsli~ 41 (192)
T 2fg5_A 25 KVCLLGDTGVGKSSIVC 41 (192)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999653
No 390
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=81.42 E-value=0.45 Score=41.28 Aligned_cols=17 Identities=29% Similarity=0.452 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 23 ki~v~G~~~~GKSsli~ 39 (191)
T 2a5j_A 23 KYIIIGDTGVGKSCLLL 39 (191)
T ss_dssp EEEEESSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999764
No 391
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A
Probab=81.41 E-value=0.44 Score=48.81 Aligned_cols=18 Identities=33% Similarity=0.580 Sum_probs=16.0
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..+++.|++|+||||++.
T Consensus 40 ~~IvlvGlpGsGKSTia~ 57 (469)
T 1bif_A 40 TLIVMVGLPARGKTYISK 57 (469)
T ss_dssp EEEEEECCTTSSHHHHHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 469999999999999875
No 392
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=81.38 E-value=0.47 Score=41.54 Aligned_cols=17 Identities=41% Similarity=0.548 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 10 ki~v~G~~~~GKSsli~ 26 (206)
T 2bcg_Y 10 KLLLIGNSGVGKSCLLL 26 (206)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999753
No 393
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8
Probab=81.36 E-value=0.46 Score=40.67 Aligned_cols=17 Identities=41% Similarity=0.579 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 17 ~i~v~G~~~~GKssli~ 33 (195)
T 1x3s_A 17 KILIIGESGVGKSSLLL 33 (195)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999654
No 394
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=81.33 E-value=0.46 Score=41.46 Aligned_cols=17 Identities=35% Similarity=0.601 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 28 ki~vvG~~~~GKSsLi~ 44 (192)
T 2il1_A 28 QVIIIGSRGVGKTSLME 44 (192)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999754
No 395
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=81.29 E-value=0.42 Score=52.71 Aligned_cols=21 Identities=38% Similarity=0.574 Sum_probs=17.9
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..+..++|+|+||||||||+.
T Consensus 236 ~~~~~vLL~Gp~GtGKTtLar 256 (806)
T 1ypw_A 236 KPPRGILLYGPPGTGKTLIAR 256 (806)
T ss_dssp CCCCEEEECSCTTSSHHHHHH
T ss_pred CCCCeEEEECcCCCCHHHHHH
Confidence 446779999999999999774
No 396
>2q3h_A RAS homolog gene family, member U; GTPase, structural genomics, structural genomics consortium,; HET: GDP; 1.73A {Homo sapiens}
Probab=81.24 E-value=0.46 Score=41.31 Aligned_cols=18 Identities=28% Similarity=0.374 Sum_probs=15.4
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++|+|++|+|||||..
T Consensus 21 ~ki~~~G~~~~GKssl~~ 38 (201)
T 2q3h_A 21 VKCVLVGDGAVGKTSLVV 38 (201)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 359999999999999753
No 397
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=81.24 E-value=0.42 Score=49.31 Aligned_cols=18 Identities=39% Similarity=0.684 Sum_probs=15.7
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
+.++|+|++|||||.|+.
T Consensus 183 rGvLL~GPPGTGKTllAk 200 (405)
T 4b4t_J 183 KGVILYGPPGTGKTLLAR 200 (405)
T ss_dssp CCEEEESCSSSSHHHHHH
T ss_pred CceEEeCCCCCCHHHHHH
Confidence 459999999999999874
No 398
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=81.23 E-value=0.46 Score=41.36 Aligned_cols=18 Identities=33% Similarity=0.519 Sum_probs=15.4
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++|+|.+|+|||||..
T Consensus 29 ~ki~v~G~~~vGKSsli~ 46 (196)
T 2atv_A 29 VKLAIFGRAGVGKSALVV 46 (196)
T ss_dssp EEEEEECCTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 359999999999999754
No 399
>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C
Probab=81.11 E-value=0.35 Score=41.84 Aligned_cols=17 Identities=24% Similarity=0.331 Sum_probs=4.4
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 22 ~i~v~G~~~~GKssli~ 38 (208)
T 2yc2_C 22 KVAVVGEATVGKSALIS 38 (208)
T ss_dssp EEEEC------------
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999764
No 400
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans}
Probab=81.05 E-value=0.26 Score=48.69 Aligned_cols=19 Identities=32% Similarity=0.611 Sum_probs=16.8
Q ss_pred CCCCEEEEEecCCCCccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLS 351 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLS 351 (451)
..| ..+|.|.+|+|||||-
T Consensus 59 ~~G-~~~lvG~NGaGKStLl 77 (415)
T 4aby_A 59 GGG-FCAFTGETGAGKSIIV 77 (415)
T ss_dssp CSS-EEEEEESHHHHHHHHT
T ss_pred CCC-cEEEECCCCCCHHHHH
Confidence 557 9999999999999965
No 401
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12
Probab=80.88 E-value=0.54 Score=47.32 Aligned_cols=19 Identities=21% Similarity=0.569 Sum_probs=16.5
Q ss_pred CCCEEEEEecCCCCccccc
Q 013022 333 DGDVALFFGLSGTGKTTLS 351 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLS 351 (451)
.|...+|.|++|+|||||.
T Consensus 25 ~~~~~~i~G~nG~GKstll 43 (430)
T 1w1w_A 25 ESNFTSIIGPNGSGKSNMM 43 (430)
T ss_dssp TCSEEEEECSTTSSHHHHH
T ss_pred CCCEEEEECCCCCCHHHHH
Confidence 4678999999999999943
No 402
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens}
Probab=80.88 E-value=0.5 Score=41.59 Aligned_cols=17 Identities=41% Similarity=0.554 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 27 ki~v~G~~~~GKSsLi~ 43 (200)
T 2o52_A 27 KFLVIGSAGTGKSCLLH 43 (200)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999764
No 403
>2fv8_A H6, RHO-related GTP-binding protein RHOB; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=80.82 E-value=0.5 Score=41.71 Aligned_cols=17 Identities=29% Similarity=0.300 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 27 ki~vvG~~~~GKSsli~ 43 (207)
T 2fv8_A 27 KLVVVGDGACGKTCLLI 43 (207)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999753
No 404
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=80.72 E-value=0.49 Score=41.29 Aligned_cols=18 Identities=39% Similarity=0.475 Sum_probs=15.5
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++|+|.+|+|||||..
T Consensus 21 ~~i~v~G~~~~GKSsli~ 38 (213)
T 3cph_A 21 MKILLIGDSGVGKSCLLV 38 (213)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 459999999999999653
No 405
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=80.70 E-value=0.51 Score=42.17 Aligned_cols=17 Identities=35% Similarity=0.554 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 28 ki~lvG~~~vGKSsLi~ 44 (201)
T 2ew1_A 28 KIVLIGNAGVGKTCLVR 44 (201)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 59999999999999754
No 406
>4gzl_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTP binding, membrane, hydrolase; HET: GNP; 2.00A {Homo sapiens} PDB: 3th5_A* 4gzm_A*
Probab=80.67 E-value=0.51 Score=41.76 Aligned_cols=17 Identities=29% Similarity=0.280 Sum_probs=15.3
Q ss_pred CEEEEEecCCCCccccc
Q 013022 335 DVALFFGLSGTGKTTLS 351 (451)
Q Consensus 335 ~valffGLSGTGKTTLS 351 (451)
-.++|+|.+|+|||||.
T Consensus 31 ~ki~vvG~~~~GKSsLi 47 (204)
T 4gzl_A 31 IKCVVVGDGAVGKTCLL 47 (204)
T ss_dssp EEEEEEESTTSSHHHHH
T ss_pred EEEEEECcCCCCHHHHH
Confidence 45999999999999976
No 407
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=80.61 E-value=0.46 Score=44.28 Aligned_cols=16 Identities=38% Similarity=0.574 Sum_probs=14.7
Q ss_pred EEEEecCCCCcccccc
Q 013022 337 ALFFGLSGTGKTTLST 352 (451)
Q Consensus 337 alffGLSGTGKTTLSa 352 (451)
++|+|++|+||||++.
T Consensus 45 ~ll~G~~G~GKt~la~ 60 (323)
T 1sxj_B 45 MIISGMPGIGKTTSVH 60 (323)
T ss_dssp EEEECSTTSSHHHHHH
T ss_pred EEEECcCCCCHHHHHH
Confidence 8999999999999864
No 408
>4djt_A GTP-binding nuclear protein GSP1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, RAN family; HET: GDP; 1.80A {Encephalitozoon cuniculi}
Probab=80.47 E-value=0.51 Score=41.71 Aligned_cols=17 Identities=35% Similarity=0.434 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 13 ki~vvG~~~~GKSsli~ 29 (218)
T 4djt_A 13 KICLIGDGGVGKTTYIN 29 (218)
T ss_dssp EEEEECCTTSSHHHHHC
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999654
No 409
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A*
Probab=80.40 E-value=0.52 Score=40.88 Aligned_cols=18 Identities=33% Similarity=0.359 Sum_probs=15.4
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++|+|.+|+|||||..
T Consensus 23 ~ki~v~G~~~~GKSsli~ 40 (188)
T 1zd9_A 23 MELTLVGLQYSGKTTFVN 40 (188)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 459999999999999753
No 410
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=80.37 E-value=0.55 Score=42.29 Aligned_cols=19 Identities=16% Similarity=0.365 Sum_probs=16.0
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
...++|+|.+|+|||||..
T Consensus 29 ~~kI~vvG~~~vGKSsLin 47 (228)
T 2qu8_A 29 KKTIILSGAPNVGKSSFMN 47 (228)
T ss_dssp SEEEEEECSTTSSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 3469999999999999753
No 411
>3k53_A Ferrous iron transport protein B; GTPase fold, helical bundle, G-protein, prokaryote, GTP-BIND nucleotide-binding, metal transport; 2.70A {Pyrococcus furiosus}
Probab=80.37 E-value=0.57 Score=43.93 Aligned_cols=17 Identities=29% Similarity=0.407 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 5 ~i~lvG~~g~GKTTL~n 21 (271)
T 3k53_A 5 TVALVGNPNVGKTTIFN 21 (271)
T ss_dssp EEEEEECSSSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999754
No 412
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=80.31 E-value=0.51 Score=41.67 Aligned_cols=17 Identities=47% Similarity=0.491 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 27 ki~vvG~~~~GKSsLi~ 43 (217)
T 2f7s_A 27 KLLALGDSGVGKTTFLY 43 (217)
T ss_dssp EEEEESCTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999754
No 413
>2x77_A ADP-ribosylation factor; GTP-binding protein, small GTPase, nucleotide-binding; HET: GDP; 2.10A {Leishmania major}
Probab=80.28 E-value=0.5 Score=40.68 Aligned_cols=19 Identities=32% Similarity=0.448 Sum_probs=15.9
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
.-.++++|.+|+|||||..
T Consensus 22 ~~~i~v~G~~~~GKssli~ 40 (189)
T 2x77_A 22 KIRVLMLGLDNAGKTSILY 40 (189)
T ss_dssp CEEEEEEEETTSSHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHH
Confidence 3469999999999999653
No 414
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens}
Probab=80.24 E-value=0.52 Score=41.26 Aligned_cols=18 Identities=17% Similarity=0.233 Sum_probs=15.6
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++|+|.+|+|||||..
T Consensus 29 ~ki~v~G~~~~GKSsli~ 46 (199)
T 2p5s_A 29 YKIVLAGDAAVGKSSFLM 46 (199)
T ss_dssp EEEEEESSTTSSHHHHHH
T ss_pred eEEEEECcCCCCHHHHHH
Confidence 459999999999999764
No 415
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=80.23 E-value=0.64 Score=44.48 Aligned_cols=18 Identities=39% Similarity=0.661 Sum_probs=15.5
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|.|++|||||||..
T Consensus 39 ~~~ll~G~~G~GKT~la~ 56 (373)
T 1jr3_A 39 HAYLFSGTRGVGKTSIAR 56 (373)
T ss_dssp SEEEEESCTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 358999999999999764
No 416
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=80.19 E-value=0.48 Score=49.80 Aligned_cols=16 Identities=44% Similarity=0.717 Sum_probs=14.8
Q ss_pred EEEEecCCCCcccccc
Q 013022 337 ALFFGLSGTGKTTLST 352 (451)
Q Consensus 337 alffGLSGTGKTTLSa 352 (451)
++|+|++|||||||..
T Consensus 67 vLL~GppGtGKTtLar 82 (499)
T 2dhr_A 67 VLLVGPPGVGKTHLAR 82 (499)
T ss_dssp EEEECSSSSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 9999999999999874
No 417
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=80.16 E-value=0.58 Score=40.67 Aligned_cols=16 Identities=38% Similarity=0.827 Sum_probs=14.4
Q ss_pred CEEEEEecCCCCcccc
Q 013022 335 DVALFFGLSGTGKTTL 350 (451)
Q Consensus 335 ~valffGLSGTGKTTL 350 (451)
...+|.|+.|+|||||
T Consensus 24 g~~~I~G~NGsGKSti 39 (149)
T 1f2t_A 24 GINLIIGQNGSGKSSL 39 (149)
T ss_dssp EEEEEECCTTSSHHHH
T ss_pred CeEEEECCCCCCHHHH
Confidence 4789999999999994
No 418
>3gj0_A GTP-binding nuclear protein RAN; G protein, GDP, acetylation, cytoplasm, HOST- virus interaction, nucleotide-binding, nucleus, phosphoprotein; HET: GDP; 1.48A {Homo sapiens} SCOP: c.37.1.8 PDB: 3gj3_A* 3gj5_A* 3gj4_A* 3gj6_A* 3gj7_A* 3gj8_A* 1i2m_A 1a2k_C 1ibr_A* 1k5d_A* 1k5g_A* 1qbk_C* 3a6p_C* 3ch5_A* 4gmx_A* 4gpt_A* 4hat_A* 4hau_A* 4hav_A* 4haw_A* ...
Probab=80.03 E-value=0.55 Score=41.78 Aligned_cols=17 Identities=41% Similarity=0.569 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 17 ki~v~G~~~~GKSsli~ 33 (221)
T 3gj0_A 17 KLVLVGDGGTGKTTFVK 33 (221)
T ss_dssp EEEEEECTTSSHHHHHT
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999754
No 419
>2atx_A Small GTP binding protein TC10; GTPase, P-loop, alpha-beta, hydrolase; HET: GNP; 2.65A {Homo sapiens} SCOP: c.37.1.8
Probab=79.96 E-value=0.56 Score=40.52 Aligned_cols=17 Identities=29% Similarity=0.343 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 20 ki~v~G~~~~GKssli~ 36 (194)
T 2atx_A 20 KCVVVGDGAVGKTCLLM 36 (194)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999753
No 420
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A*
Probab=79.92 E-value=0.53 Score=46.90 Aligned_cols=17 Identities=35% Similarity=0.745 Sum_probs=14.8
Q ss_pred CCCEEEEEecCCCCcccc
Q 013022 333 DGDVALFFGLSGTGKTTL 350 (451)
Q Consensus 333 ~G~valffGLSGTGKTTL 350 (451)
.| ..+++|++|+|||||
T Consensus 23 ~g-~~~i~G~NGaGKTTl 39 (365)
T 3qf7_A 23 SG-ITVVEGPNGAGKSSL 39 (365)
T ss_dssp SE-EEEEECCTTSSHHHH
T ss_pred CC-eEEEECCCCCCHHHH
Confidence 35 788999999999995
No 421
>2j0v_A RAC-like GTP-binding protein ARAC7; nucleotide-binding protein, ROP9, atrac7, membrane, palmitate, RHO GTPase; HET: GDP; 1.78A {Arabidopsis thaliana}
Probab=79.89 E-value=0.56 Score=41.22 Aligned_cols=17 Identities=24% Similarity=0.274 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 11 ki~i~G~~~~GKTsli~ 27 (212)
T 2j0v_A 11 KCVTVGDGAVGKTCMLI 27 (212)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999753
No 422
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=79.82 E-value=0.69 Score=53.77 Aligned_cols=21 Identities=33% Similarity=0.564 Sum_probs=18.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|.||+|||||..
T Consensus 1103 ~~Ge~vaIVG~SGsGKSTL~~ 1123 (1321)
T 4f4c_A 1103 EPGQTLALVGPSGCGKSTVVA 1123 (1321)
T ss_dssp CTTCEEEEECSTTSSTTSHHH
T ss_pred CCCCEEEEECCCCChHHHHHH
Confidence 458889999999999999765
No 423
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A*
Probab=79.80 E-value=0.57 Score=41.04 Aligned_cols=19 Identities=37% Similarity=0.434 Sum_probs=16.1
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
.-.++|+|++|+|||||..
T Consensus 29 ~~ki~v~G~~~vGKSsLi~ 47 (192)
T 2b6h_A 29 QMRILMVGLDAAGKTTILY 47 (192)
T ss_dssp CEEEEEEESTTSSHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHH
Confidence 4469999999999999754
No 424
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=79.80 E-value=0.56 Score=48.50 Aligned_cols=18 Identities=39% Similarity=0.628 Sum_probs=15.8
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
.++++.|+||+|||||+.
T Consensus 3 ~~i~i~GptgsGKttla~ 20 (409)
T 3eph_A 3 KVIVIAGTTGVGKSQLSI 20 (409)
T ss_dssp EEEEEEECSSSSHHHHHH
T ss_pred cEEEEECcchhhHHHHHH
Confidence 368899999999999875
No 425
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium}
Probab=79.74 E-value=0.55 Score=45.35 Aligned_cols=19 Identities=37% Similarity=0.524 Sum_probs=16.2
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++|.|.+|||||+++.
T Consensus 25 ~~~vLi~Ge~GtGKt~lAr 43 (304)
T 1ojl_A 25 DATVLIHGDSGTGKELVAR 43 (304)
T ss_dssp TSCEEEESCTTSCHHHHHH
T ss_pred CCcEEEECCCCchHHHHHH
Confidence 3469999999999999874
No 426
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens}
Probab=79.72 E-value=0.57 Score=41.77 Aligned_cols=17 Identities=35% Similarity=0.520 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 36 ki~vvG~~~vGKSsli~ 52 (214)
T 2j1l_A 36 KVVLVGDGGCGKTSLLM 52 (214)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999754
No 427
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=79.71 E-value=0.56 Score=48.59 Aligned_cols=18 Identities=39% Similarity=0.689 Sum_probs=16.2
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|.|++|||||||+.
T Consensus 78 ~~lLL~GppGtGKTtla~ 95 (516)
T 1sxj_A 78 RAAMLYGPPGIGKTTAAH 95 (516)
T ss_dssp SEEEEECSTTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 679999999999999864
No 428
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=79.57 E-value=0.51 Score=49.32 Aligned_cols=18 Identities=44% Similarity=0.597 Sum_probs=15.5
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|+|++|||||||+.
T Consensus 50 ~gvLL~GppGtGKT~Lar 67 (476)
T 2ce7_A 50 KGILLVGPPGTGKTLLAR 67 (476)
T ss_dssp SEEEEECCTTSSHHHHHH
T ss_pred CeEEEECCCCCCHHHHHH
Confidence 349999999999999874
No 429
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=79.49 E-value=0.55 Score=41.94 Aligned_cols=18 Identities=22% Similarity=0.257 Sum_probs=15.8
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..+++.|.+||||||++.
T Consensus 4 ~~i~i~G~~gsGkst~~~ 21 (219)
T 2h92_A 4 INIALDGPAAAGKSTIAK 21 (219)
T ss_dssp CCEEEECCTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 468999999999999875
No 430
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=79.35 E-value=0.63 Score=42.87 Aligned_cols=18 Identities=28% Similarity=0.460 Sum_probs=15.5
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
-.++|+|.+|+|||||..
T Consensus 23 ~~I~lvG~~g~GKStl~n 40 (260)
T 2xtp_A 23 LRIILVGKTGTGKSAAGN 40 (260)
T ss_dssp EEEEEEECTTSCHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 359999999999999754
No 431
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A*
Probab=79.30 E-value=0.55 Score=47.34 Aligned_cols=19 Identities=26% Similarity=0.436 Sum_probs=16.7
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|.+++|+|++|||||||+.
T Consensus 123 gsviLI~GpPGsGKTtLAl 141 (331)
T 2vhj_A 123 SGMVIVTGKGNSGKTPLVH 141 (331)
T ss_dssp SEEEEEECSCSSSHHHHHH
T ss_pred CcEEEEEcCCCCCHHHHHH
Confidence 4568999999999999875
No 432
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=79.24 E-value=0.59 Score=48.75 Aligned_cols=19 Identities=37% Similarity=0.590 Sum_probs=16.2
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
...++|+|+||||||+|+.
T Consensus 238 ~~~vLL~GppGtGKT~lAr 256 (489)
T 3hu3_A 238 PRGILLYGPPGTGKTLIAR 256 (489)
T ss_dssp CCEEEEECSTTSSHHHHHH
T ss_pred CCcEEEECcCCCCHHHHHH
Confidence 3469999999999999774
No 433
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=79.22 E-value=0.6 Score=53.16 Aligned_cols=21 Identities=33% Similarity=0.354 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|+.+++.|+||+|||||..
T Consensus 459 ~~Ge~v~LiGpNGsGKSTLLk 479 (986)
T 2iw3_A 459 KRARRYGICGPNGCGKSTLMR 479 (986)
T ss_dssp ETTCEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 578899999999999999753
No 434
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=79.20 E-value=0.68 Score=53.81 Aligned_cols=21 Identities=33% Similarity=0.605 Sum_probs=18.9
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|.||+|||||..
T Consensus 442 ~~G~~vaivG~sGsGKSTll~ 462 (1321)
T 4f4c_A 442 NAGQTVALVGSSGCGKSTIIS 462 (1321)
T ss_dssp CTTCEEEEEECSSSCHHHHHH
T ss_pred cCCcEEEEEecCCCcHHHHHH
Confidence 678999999999999999765
No 435
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=79.19 E-value=0.57 Score=45.58 Aligned_cols=19 Identities=42% Similarity=0.602 Sum_probs=17.3
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+.+++|.|.+|+||||+++
T Consensus 98 ~~vi~i~G~~G~GKTT~~~ 116 (297)
T 1j8m_F 98 PYVIMLVGVQGTGKTTTAG 116 (297)
T ss_dssp SEEEEEECSSCSSTTHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 7889999999999999775
No 436
>2gco_A H9, RHO-related GTP-binding protein RHOC; GTPase,signaling protein, signaling Pro; HET: GNP; 1.40A {Homo sapiens} PDB: 2gcn_A* 2gcp_A* 1z2c_A* 1x86_B 2rgn_C* 1lb1_B 1s1c_A* 3kz1_E* 3lxr_A* 3lwn_A* 3lw8_A* 1cxz_A* 1a2b_A* 1ow3_B* 1ftn_A* 1cc0_A* 3msx_A* 1xcg_B 3t06_B 1tx4_B* ...
Probab=79.12 E-value=0.62 Score=40.93 Aligned_cols=17 Identities=29% Similarity=0.317 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 27 ki~vvG~~~~GKSsli~ 43 (201)
T 2gco_A 27 KLVIVGDGACGKTCLLI 43 (201)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999753
No 437
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12
Probab=78.92 E-value=0.75 Score=44.57 Aligned_cols=16 Identities=31% Similarity=0.625 Sum_probs=14.6
Q ss_pred EEEEEecCCCCccccc
Q 013022 336 VALFFGLSGTGKTTLS 351 (451)
Q Consensus 336 valffGLSGTGKTTLS 351 (451)
..+|.|.+|+|||||.
T Consensus 26 ~~~i~G~NGsGKS~ll 41 (322)
T 1e69_A 26 VTAIVGPNGSGKSNII 41 (322)
T ss_dssp EEEEECCTTTCSTHHH
T ss_pred cEEEECCCCCcHHHHH
Confidence 8999999999999943
No 438
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=78.91 E-value=0.5 Score=46.89 Aligned_cols=22 Identities=9% Similarity=0.083 Sum_probs=18.0
Q ss_pred CCCCCEEEEEecCCCCcccccc
Q 013022 331 GKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 331 g~~G~valffGLSGTGKTTLSa 352 (451)
+..+..++|+|++|||||++..
T Consensus 42 ~~~~~~lli~GpPGTGKT~~v~ 63 (318)
T 3te6_A 42 SSQNKLFYITNADDSTKFQLVN 63 (318)
T ss_dssp TTCCCEEEEECCCSHHHHHHHH
T ss_pred CCCCCeEEEECCCCCCHHHHHH
Confidence 3456789999999999998654
No 439
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=78.89 E-value=0.71 Score=43.30 Aligned_cols=18 Identities=28% Similarity=0.600 Sum_probs=16.0
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..+++.|+.|+|||||..
T Consensus 32 ~~v~i~G~~G~GKT~Ll~ 49 (350)
T 2qen_A 32 PLTLLLGIRRVGKSSLLR 49 (350)
T ss_dssp SEEEEECCTTSSHHHHHH
T ss_pred CeEEEECCCcCCHHHHHH
Confidence 579999999999999764
No 440
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=78.88 E-value=0.54 Score=48.54 Aligned_cols=44 Identities=18% Similarity=0.290 Sum_probs=27.5
Q ss_pred hhhhHHHHHHHHhcccCCeeeeccccccCCCCCEEEEEecCCCCcccccc
Q 013022 303 EMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 303 EmKKgifTl~n~~l~~~G~LpmH~sanvg~~G~valffGLSGTGKTTLSa 352 (451)
+++|.+..-+..++.... -..+.. .+.+++|.|++|+||||+++
T Consensus 73 ~~~~~v~~~L~~~~~~~~-----~~i~l~-~~~vi~i~G~~GsGKTT~~~ 116 (425)
T 2ffh_A 73 VILATVYEALKEALGGEA-----RLPVLK-DRNLWFLVGLQGSGKTTTAA 116 (425)
T ss_dssp HHHHHHHHHHHHHTTSSC-----CCCCCC-SSEEEEEECCTTSSHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCc-----ccccCC-CCeEEEEECCCCCCHHHHHH
Confidence 356666655544443211 111223 56789999999999999775
No 441
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=78.86 E-value=0.6 Score=48.67 Aligned_cols=45 Identities=22% Similarity=0.405 Sum_probs=27.2
Q ss_pred hhhhHHHHHHHHhcccCCeeeeccccccC-CCCCEEEEEecCCCCcccccc
Q 013022 303 EMKKGLFSVMHYLMPKRQILSLHSGCNMG-KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 303 EmKKgifTl~n~~l~~~G~LpmH~sanvg-~~G~valffGLSGTGKTTLSa 352 (451)
+.|+.+-....+-+....++. ..+ +--+.++|+|++|||||.|+.
T Consensus 189 ~~k~~L~e~v~~Pl~~pe~f~-----~~Gi~~prGvLLyGPPGTGKTlLAk 234 (437)
T 4b4t_I 189 SQIQEIKESVELPLTHPELYE-----EMGIKPPKGVILYGAPGTGKTLLAK 234 (437)
T ss_dssp HHHHHHHHHHHHHHHCCHHHH-----HHTCCCCSEEEEESSTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHH-----hCCCCCCCCCceECCCCchHHHHHH
Confidence 567766665554333222221 122 223569999999999999874
No 442
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A*
Probab=78.85 E-value=0.62 Score=41.04 Aligned_cols=17 Identities=35% Similarity=0.645 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.+++.|++|+|||||..
T Consensus 8 kv~lvG~~~vGKSsL~~ 24 (192)
T 2cjw_A 8 RVVLIGEQGVGKSTLAN 24 (192)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 48999999999999753
No 443
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=78.83 E-value=0.71 Score=44.81 Aligned_cols=21 Identities=24% Similarity=0.322 Sum_probs=19.0
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|.+|+|||||+.
T Consensus 66 ~~G~l~li~G~pG~GKTtl~l 86 (315)
T 3bh0_A 66 KRRNFVLIAARPSMGKTAFAL 86 (315)
T ss_dssp CTTCEEEEECCTTSSHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHH
Confidence 568999999999999999875
No 444
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=78.78 E-value=0.7 Score=53.55 Aligned_cols=21 Identities=38% Similarity=0.566 Sum_probs=18.9
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|.||+|||||..
T Consensus 414 ~~G~~~~ivG~sGsGKSTl~~ 434 (1284)
T 3g5u_A 414 KSGQTVALVGNSGCGKSTTVQ 434 (1284)
T ss_dssp CTTCEEEEECCSSSSHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 678999999999999999764
No 445
>1gwn_A RHO-related GTP-binding protein RHOE; GTPase, inactive GTPase, signal transduction; HET: GTP; 2.1A {Mus musculus} SCOP: c.37.1.8
Probab=78.75 E-value=0.64 Score=41.55 Aligned_cols=17 Identities=35% Similarity=0.341 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 30 ki~vvG~~~vGKSsLi~ 46 (205)
T 1gwn_A 30 KIVVVGDSQCGKTALLH 46 (205)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999753
No 446
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A
Probab=78.62 E-value=0.7 Score=48.05 Aligned_cols=20 Identities=30% Similarity=0.376 Sum_probs=17.5
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|..+++||+||+|||||..
T Consensus 173 rGQr~~IvG~sG~GKTtLl~ 192 (422)
T 3ice_A 173 RGQRGLIVAPPKAGKTMLLQ 192 (422)
T ss_dssp TTCEEEEECCSSSSHHHHHH
T ss_pred CCcEEEEecCCCCChhHHHH
Confidence 35689999999999999875
No 447
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=78.60 E-value=0.38 Score=42.61 Aligned_cols=19 Identities=32% Similarity=0.317 Sum_probs=16.1
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
...++|+|.+|+|||||..
T Consensus 29 ~~~i~v~G~~~~GKSslin 47 (223)
T 4dhe_A 29 QPEIAFAGRSNAGKSTAIN 47 (223)
T ss_dssp SCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEEcCCCCCHHHHHH
Confidence 3569999999999999764
No 448
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=78.47 E-value=0.53 Score=49.45 Aligned_cols=19 Identities=37% Similarity=0.529 Sum_probs=16.3
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
-+.++|+|++|||||+|+.
T Consensus 243 prGILLyGPPGTGKTlLAk 261 (467)
T 4b4t_H 243 PKGILLYGPPGTGKTLCAR 261 (467)
T ss_dssp CSEEEECSCTTSSHHHHHH
T ss_pred CCceEeeCCCCCcHHHHHH
Confidence 3569999999999999764
No 449
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=78.44 E-value=0.7 Score=43.47 Aligned_cols=17 Identities=41% Similarity=0.581 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++++|.||+|||||..
T Consensus 10 ~I~vvG~~g~GKSTLin 26 (274)
T 3t5d_A 10 TLMVVGESGLGKSTLIN 26 (274)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999763
No 450
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=78.27 E-value=0.61 Score=49.33 Aligned_cols=21 Identities=33% Similarity=0.518 Sum_probs=17.8
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.+..++|.|++|+||||++.
T Consensus 370 ~~~~~I~l~G~~GsGKSTia~ 390 (546)
T 2gks_A 370 KQGFCVWLTGLPCAGKSTIAE 390 (546)
T ss_dssp GCCEEEEEECSTTSSHHHHHH
T ss_pred ccceEEEccCCCCCCHHHHHH
Confidence 346679999999999999875
No 451
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=78.22 E-value=0.7 Score=51.71 Aligned_cols=21 Identities=38% Similarity=0.542 Sum_probs=19.0
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..++|.|.||+|||||..
T Consensus 521 ~~Geiv~I~G~nGSGKSTLl~ 541 (842)
T 2vf7_A 521 PLGVMTSVTGVSGSGKSTLVS 541 (842)
T ss_dssp ESSSEEEEECCTTSSHHHHCC
T ss_pred cCCCEEEEEcCCCcCHHHHHH
Confidence 568999999999999999875
No 452
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=78.17 E-value=0.68 Score=40.84 Aligned_cols=17 Identities=24% Similarity=0.348 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 31 ki~vvG~~~vGKSsli~ 47 (201)
T 2hup_A 31 KLVLVGDASVGKTCVVQ 47 (201)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 39999999999999764
No 453
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=78.09 E-value=0.68 Score=47.52 Aligned_cols=16 Identities=44% Similarity=0.617 Sum_probs=14.3
Q ss_pred EEEEecCCCCcccccc
Q 013022 337 ALFFGLSGTGKTTLST 352 (451)
Q Consensus 337 alffGLSGTGKTTLSa 352 (451)
+++.|.||+|||||..
T Consensus 34 I~lvG~sGaGKSTLln 49 (418)
T 2qag_C 34 LMVVGESGLGKSTLIN 49 (418)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCcHHHHHH
Confidence 7999999999999754
No 454
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=77.92 E-value=0.71 Score=48.45 Aligned_cols=19 Identities=21% Similarity=0.574 Sum_probs=16.5
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|..++|+|++|||||+|+.
T Consensus 41 ~~~VLL~GpPGtGKT~LAr 59 (500)
T 3nbx_X 41 GESVFLLGPPGIAKSLIAR 59 (500)
T ss_dssp TCEEEEECCSSSSHHHHHH
T ss_pred CCeeEeecCchHHHHHHHH
Confidence 4579999999999999874
No 455
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=77.88 E-value=0.62 Score=47.04 Aligned_cols=19 Identities=21% Similarity=0.321 Sum_probs=16.5
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.| ++.++|++|+|||||+.
T Consensus 28 ~G-iteI~G~pGsGKTtL~L 46 (333)
T 3io5_A 28 SG-LLILAGPSKSFKSNFGL 46 (333)
T ss_dssp SE-EEEEEESSSSSHHHHHH
T ss_pred CC-eEEEECCCCCCHHHHHH
Confidence 45 79999999999999864
No 456
>3th5_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTPase, GTP binding, protein binding, signali protein; HET: GNP; 2.30A {Homo sapiens}
Probab=79.05 E-value=0.47 Score=41.60 Aligned_cols=17 Identities=29% Similarity=0.280 Sum_probs=15.2
Q ss_pred CEEEEEecCCCCccccc
Q 013022 335 DVALFFGLSGTGKTTLS 351 (451)
Q Consensus 335 ~valffGLSGTGKTTLS 351 (451)
-.++|+|.+|+|||||.
T Consensus 31 ~ki~v~G~~~~GKSsli 47 (204)
T 3th5_A 31 IKCVVVGDGAVGKTCLL 47 (204)
Confidence 45999999999999976
No 457
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=77.35 E-value=0.63 Score=48.41 Aligned_cols=20 Identities=35% Similarity=0.622 Sum_probs=17.5
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
...+++|.|++|+||||+++
T Consensus 99 ~p~vIlivG~~G~GKTTt~~ 118 (443)
T 3dm5_A 99 KPTILLMVGIQGSGKTTTVA 118 (443)
T ss_dssp SSEEEEEECCTTSSHHHHHH
T ss_pred CCeEEEEECcCCCCHHHHHH
Confidence 35789999999999999776
No 458
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A*
Probab=77.29 E-value=0.72 Score=41.29 Aligned_cols=17 Identities=24% Similarity=0.290 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|+|||||..
T Consensus 29 ki~vvG~~~vGKSsL~~ 45 (214)
T 3q3j_B 29 KLVLVGDVQCGKTAMLQ 45 (214)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999764
No 459
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=77.18 E-value=0.67 Score=47.66 Aligned_cols=19 Identities=42% Similarity=0.751 Sum_probs=16.8
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
..+++|.|++|+|||||++
T Consensus 99 ~~vI~ivG~~GvGKTTla~ 117 (432)
T 2v3c_C 99 QNVILLVGIQGSGKTTTAA 117 (432)
T ss_dssp CCCEEEECCSSSSTTHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 3589999999999999876
No 460
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=77.17 E-value=0.78 Score=45.93 Aligned_cols=20 Identities=35% Similarity=0.587 Sum_probs=17.7
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|.+++++|.+|+|||||+.
T Consensus 62 ~G~ii~I~G~pGsGKTtLal 81 (356)
T 1u94_A 62 MGRIVEIYGPESSGKTTLTL 81 (356)
T ss_dssp TTSEEEEECSTTSSHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 46789999999999999875
No 461
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=77.15 E-value=0.71 Score=43.00 Aligned_cols=17 Identities=24% Similarity=0.516 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++++|.+|+|||||..
T Consensus 23 ~I~lvG~~g~GKSSlin 39 (247)
T 3lxw_A 23 RLILVGRTGAGKSATGN 39 (247)
T ss_dssp EEEEESSTTSSHHHHHH
T ss_pred EEEEECCCCCcHHHHHH
Confidence 49999999999999653
No 462
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=77.12 E-value=0.67 Score=47.56 Aligned_cols=17 Identities=29% Similarity=0.597 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|||||+|+.
T Consensus 203 ~~LL~G~pG~GKT~la~ 219 (468)
T 3pxg_A 203 NPVLIGEPGVGKTAIAE 219 (468)
T ss_dssp EEEEESCTTTTTHHHHH
T ss_pred CeEEECCCCCCHHHHHH
Confidence 47999999999999764
No 463
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=77.05 E-value=0.8 Score=45.32 Aligned_cols=21 Identities=24% Similarity=0.162 Sum_probs=17.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
.++.+++|.|.+|+|||||..
T Consensus 72 ~~~~~v~lvG~pgaGKSTLln 92 (349)
T 2www_A 72 PLAFRVGLSGPPGAGKSTFIE 92 (349)
T ss_dssp CSCEEEEEECCTTSSHHHHHH
T ss_pred cCceEEEEEcCCCCCHHHHHH
Confidence 346789999999999999653
No 464
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=77.05 E-value=0.83 Score=52.96 Aligned_cols=21 Identities=38% Similarity=0.608 Sum_probs=18.5
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||+|||||..
T Consensus 1057 ~~Ge~v~ivG~sGsGKSTl~~ 1077 (1284)
T 3g5u_A 1057 KKGQTLALVGSSGCGKSTVVQ 1077 (1284)
T ss_dssp CSSSEEEEECSSSTTHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 458899999999999999764
No 465
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=76.85 E-value=0.7 Score=43.94 Aligned_cols=19 Identities=26% Similarity=0.482 Sum_probs=16.1
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
...++|.|+.||||||++.
T Consensus 58 kn~ili~GPPGtGKTt~a~ 76 (212)
T 1tue_A 58 KNCLVFCGPANTGKSYFGM 76 (212)
T ss_dssp CSEEEEESCGGGCHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHH
Confidence 3469999999999999764
No 466
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20
Probab=76.45 E-value=0.86 Score=42.73 Aligned_cols=18 Identities=33% Similarity=0.647 Sum_probs=15.9
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..+++.|++|+|||||..
T Consensus 31 ~~v~i~G~~G~GKT~L~~ 48 (357)
T 2fna_A 31 PITLVLGLRRTGKSSIIK 48 (357)
T ss_dssp SEEEEEESTTSSHHHHHH
T ss_pred CcEEEECCCCCCHHHHHH
Confidence 379999999999999764
No 467
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=76.38 E-value=0.98 Score=40.56 Aligned_cols=19 Identities=32% Similarity=0.337 Sum_probs=16.7
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
|...++.|.-|+||||+..
T Consensus 3 g~i~vi~G~~gsGKTT~ll 21 (184)
T 2orw_A 3 GKLTVITGPMYSGKTTELL 21 (184)
T ss_dssp CCEEEEEESTTSSHHHHHH
T ss_pred cEEEEEECCCCCCHHHHHH
Confidence 6789999999999999763
No 468
>3cpj_B GTP-binding protein YPT31/YPT8; RAB GTPase, prenylation, vesicular transport, acetylation, golgi apparatus, lipoprotein, membrane; HET: GDP; 2.35A {Saccharomyces cerevisiae}
Probab=76.19 E-value=0.79 Score=41.00 Aligned_cols=17 Identities=35% Similarity=0.567 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 15 ki~v~G~~~vGKSsli~ 31 (223)
T 3cpj_B 15 KIVLIGDSGVGKSNLLS 31 (223)
T ss_dssp EEEEESCTTSSHHHHHH
T ss_pred EEEEECcCCCCHHHHHH
Confidence 49999999999999764
No 469
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=76.03 E-value=0.88 Score=51.39 Aligned_cols=20 Identities=35% Similarity=0.504 Sum_probs=18.0
Q ss_pred CCCCEEEEEecCCCCccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLS 351 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLS 351 (451)
+.|..+++.|.||+|||||.
T Consensus 608 ~~Geiv~I~G~SGSGKSTLl 627 (916)
T 3pih_A 608 PLGVFVCVTGVSGSGKSSLV 627 (916)
T ss_dssp ESSSEEEEECSTTSSHHHHH
T ss_pred cCCcEEEEEccCCCChhhhH
Confidence 45899999999999999984
No 470
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A*
Probab=75.76 E-value=0.91 Score=41.26 Aligned_cols=17 Identities=35% Similarity=0.737 Sum_probs=14.9
Q ss_pred CEEEEEecCCCCccccc
Q 013022 335 DVALFFGLSGTGKTTLS 351 (451)
Q Consensus 335 ~valffGLSGTGKTTLS 351 (451)
...+|+|+.|+|||||.
T Consensus 24 ~~~~I~G~NgsGKStil 40 (203)
T 3qks_A 24 GINLIIGQNGSGKSSLL 40 (203)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred CeEEEEcCCCCCHHHHH
Confidence 47899999999999953
No 471
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A*
Probab=75.49 E-value=0.88 Score=46.26 Aligned_cols=17 Identities=29% Similarity=0.698 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 26 ~i~l~G~~G~GKTTl~~ 42 (359)
T 2ga8_A 26 CVILVGSPGSGKSTIAE 42 (359)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCcHHHHHH
Confidence 38999999999999774
No 472
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=75.47 E-value=0.98 Score=46.02 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=18.9
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|+.+++.|.+|+|||||+.
T Consensus 201 ~~G~liiI~G~pG~GKTtl~l 221 (454)
T 2r6a_A 201 QRSDLIIVAARPSVGKTAFAL 221 (454)
T ss_dssp CTTCEEEEECCTTSCHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHH
Confidence 568999999999999999875
No 473
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=75.24 E-value=0.84 Score=46.95 Aligned_cols=19 Identities=47% Similarity=0.588 Sum_probs=16.8
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
..+++|.|++|+||||+++
T Consensus 100 ~~vI~ivG~~GvGKTT~a~ 118 (433)
T 2xxa_A 100 PAVVLMAGLQGAGKTTSVG 118 (433)
T ss_dssp SEEEEEECSTTSSHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4689999999999999876
No 474
>1wb9_A DNA mismatch repair protein MUTS; DNA-binding, ATP-binding, DNA binding, DNA repair, mismatch recognition; HET: DNA ADP; 2.10A {Escherichia coli} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1wbb_A* 1e3m_A* 1oh5_A* 1oh6_A* 1oh7_A* 1oh8_A* 1w7a_A* 2wtu_A* 1wbd_A* 1ng9_A* 3k0s_A*
Probab=75.06 E-value=1 Score=49.96 Aligned_cols=20 Identities=20% Similarity=0.235 Sum_probs=17.9
Q ss_pred CCCCEEEEEecCCCCccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLS 351 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLS 351 (451)
..|+.+++.|++|+|||||-
T Consensus 605 ~~g~i~~ItGpNGsGKSTlL 624 (800)
T 1wb9_A 605 PQRRMLIITGPNMGGKSTYM 624 (800)
T ss_dssp SSSCEEEEECCTTSSHHHHH
T ss_pred CCCcEEEEECCCCCChHHHH
Confidence 56889999999999999965
No 475
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=74.97 E-value=1 Score=42.12 Aligned_cols=17 Identities=29% Similarity=0.563 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++++|.+|+|||||..
T Consensus 38 ~I~lvG~~g~GKSSLin 54 (262)
T 3def_A 38 TVLVLGKGGVGKSSTVN 54 (262)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999764
No 476
>2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans}
Probab=74.80 E-value=0.91 Score=45.62 Aligned_cols=19 Identities=42% Similarity=0.719 Sum_probs=15.9
Q ss_pred CCCCEEEEEecCCCCccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLS 351 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLS 351 (451)
..| ..+|+|++|+|||||-
T Consensus 25 ~~g-~~~i~G~nG~GKttll 43 (359)
T 2o5v_A 25 PEG-VTGIYGENGAGKTNLL 43 (359)
T ss_dssp CSE-EEEEECCTTSSHHHHH
T ss_pred cCC-eEEEECCCCCChhHHH
Confidence 345 8999999999999943
No 477
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A*
Probab=74.73 E-value=1 Score=42.15 Aligned_cols=17 Identities=29% Similarity=0.538 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++++|.+|+|||||..
T Consensus 41 ~I~vvG~~g~GKSSLin 57 (270)
T 1h65_A 41 TILVMGKGGVGKSSTVN 57 (270)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 59999999999999753
No 478
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=74.64 E-value=0.85 Score=47.43 Aligned_cols=18 Identities=33% Similarity=0.601 Sum_probs=15.6
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
..++|+|++|||||||+.
T Consensus 51 ~~iLl~GppGtGKT~lar 68 (444)
T 1g41_A 51 KNILMIGPTGVGKTEIAR 68 (444)
T ss_dssp CCEEEECCTTSSHHHHHH
T ss_pred ceEEEEcCCCCCHHHHHH
Confidence 459999999999999764
No 479
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=74.41 E-value=0.71 Score=44.68 Aligned_cols=19 Identities=37% Similarity=0.573 Sum_probs=15.7
Q ss_pred CCEEEE--EecCCCCcccccc
Q 013022 334 GDVALF--FGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valf--fGLSGTGKTTLSa 352 (451)
+..+++ .|++|+|||||..
T Consensus 50 ~~~~li~i~G~~G~GKT~L~~ 70 (412)
T 1w5s_A 50 DVNMIYGSIGRVGIGKTTLAK 70 (412)
T ss_dssp CEEEEEECTTCCSSSHHHHHH
T ss_pred CCEEEEeCcCcCCCCHHHHHH
Confidence 346777 9999999999864
No 480
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=74.30 E-value=0.61 Score=53.12 Aligned_cols=21 Identities=29% Similarity=0.366 Sum_probs=18.2
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|..+++.|+||+|||||..
T Consensus 697 ~~GeivaIiGpNGSGKSTLLk 717 (986)
T 2iw3_A 697 SLSSRIAVIGPNGAGKSTLIN 717 (986)
T ss_dssp ETTCEEEECSCCCHHHHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHHH
Confidence 357889999999999999764
No 481
>1ni3_A YCHF GTPase, YCHF GTP-binding protein; structural genomics, GTP1OBG, PSI, protein structure initiative; 2.80A {Schizosaccharomyces pombe} SCOP: c.37.1.8 d.15.10.2
Probab=73.87 E-value=1.3 Score=45.24 Aligned_cols=20 Identities=20% Similarity=0.273 Sum_probs=17.3
Q ss_pred CCCCEEEEEecCCCCccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLS 351 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLS 351 (451)
..|..++|.|++|+|||||-
T Consensus 18 ~~g~~vgiVG~pnaGKSTL~ 37 (392)
T 1ni3_A 18 GNNLKTGIVGMPNVGKSTFF 37 (392)
T ss_dssp SSCCEEEEEECSSSSHHHHH
T ss_pred cCCCEEEEECCCCCCHHHHH
Confidence 45788999999999999964
No 482
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=73.85 E-value=1.1 Score=51.19 Aligned_cols=21 Identities=38% Similarity=0.529 Sum_probs=18.6
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
+.|..+++.|+||+|||||..
T Consensus 666 ~~GeivaI~G~nGSGKSTLl~ 686 (993)
T 2ygr_A 666 PLGVLTSVTGVSGSGKSTLVN 686 (993)
T ss_dssp ESSSEEEEECSTTSSHHHHHT
T ss_pred CCCCEEEEEcCCCCCHHHHHH
Confidence 458999999999999999765
No 483
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK family, structur genomics, structural genomics consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo sapiens} SCOP: c.37.1.8
Probab=73.64 E-value=1 Score=41.17 Aligned_cols=17 Identities=35% Similarity=0.645 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.+++.|++|+|||||..
T Consensus 39 kVvlvG~~~vGKSSLl~ 55 (211)
T 2g3y_A 39 RVVLIGEQGVGKSTLAN 55 (211)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 49999999999999764
No 484
>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell GTP-binding, ION transport, membrane; 2.50A {Legionella pneumophila}
Probab=73.57 E-value=1.2 Score=42.04 Aligned_cols=17 Identities=47% Similarity=0.546 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||-.
T Consensus 3 kI~lvG~~n~GKSTL~n 19 (256)
T 3iby_A 3 HALLIGNPNCGKTTLFN 19 (256)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999754
No 485
>3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B
Probab=73.42 E-value=1 Score=43.97 Aligned_cols=19 Identities=32% Similarity=0.655 Sum_probs=15.7
Q ss_pred CCCEEEEEecCCCCccccc
Q 013022 333 DGDVALFFGLSGTGKTTLS 351 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLS 351 (451)
+....+|+|+.|+|||||.
T Consensus 22 ~~~~~~i~G~NGsGKS~ll 40 (339)
T 3qkt_A 22 KEGINLIIGQNGSGKSSLL 40 (339)
T ss_dssp CSEEEEEECCTTSSHHHHH
T ss_pred CCCeEEEECCCCCCHHHHH
Confidence 3457899999999999953
No 486
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=73.19 E-value=1 Score=44.46 Aligned_cols=19 Identities=16% Similarity=0.209 Sum_probs=15.8
Q ss_pred CCEEEEEecCCCCcccccc
Q 013022 334 GDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 334 G~valffGLSGTGKTTLSa 352 (451)
+..++++|.||+|||||..
T Consensus 35 ~~~~~i~G~~G~GKs~~~~ 53 (392)
T 4ag6_A 35 NSNWTILAKPGAGKSFTAK 53 (392)
T ss_dssp CCCEEEECCTTSSHHHHHH
T ss_pred cCceEEEcCCCCCHHHHHH
Confidence 3458999999999999764
No 487
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=73.18 E-value=1 Score=48.76 Aligned_cols=17 Identities=41% Similarity=0.745 Sum_probs=15.5
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|++|||||+|+.
T Consensus 523 ~~Ll~Gp~GtGKT~lA~ 539 (758)
T 3pxi_A 523 SFIFLGPTGVGKTELAR 539 (758)
T ss_dssp EEEEESCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 69999999999999875
No 488
>3b1v_A Ferrous iron uptake transporter protein B; G protein, iron transport, GTPase, transmembrane, potassium; HET: GGM; 1.85A {Streptococcus thermophilus} PDB: 3b1w_A* 3lx5_A* 3lx8_A* 3ss8_A* 3b1z_A 3b1y_A* 3b1x_A* 3tah_A*
Probab=72.88 E-value=1.2 Score=42.69 Aligned_cols=17 Identities=29% Similarity=0.403 Sum_probs=14.9
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.+++.|.+|+|||||-.
T Consensus 5 kI~lvG~~nvGKSTL~n 21 (272)
T 3b1v_A 5 EIALIGNPNSGKTSLFN 21 (272)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999653
No 489
>1ewq_A DNA mismatch repair protein MUTS; multiple domains of protein, mostly mixed alpha-beta structures, one domain is entirely helical; HET: DNA; 2.20A {Thermus aquaticus} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1nne_A* 1fw6_A* 1ewr_A*
Probab=72.68 E-value=1.2 Score=49.25 Aligned_cols=18 Identities=28% Similarity=0.408 Sum_probs=16.7
Q ss_pred CCEEEEEecCCCCccccc
Q 013022 334 GDVALFFGLSGTGKTTLS 351 (451)
Q Consensus 334 G~valffGLSGTGKTTLS 351 (451)
|..+++.|++|+|||||-
T Consensus 576 g~i~~I~GpNGsGKSTlL 593 (765)
T 1ewq_A 576 HELVLITGPNMAGKSTFL 593 (765)
T ss_dssp SCEEEEESCSSSSHHHHH
T ss_pred CcEEEEECCCCCChHHHH
Confidence 889999999999999964
No 490
>3i8s_A Ferrous iron transport protein B; GTPase, GPCR, iron uptake, FEO, cell inner membrane, cell ME GTP-binding, ION transport, membrane; 1.80A {Escherichia coli} PDB: 3i8x_A* 3i92_A* 3hyr_A 3hyt_A* 2wic_A* 2wib_A* 2wia_A*
Probab=72.51 E-value=1.2 Score=42.09 Aligned_cols=17 Identities=35% Similarity=0.397 Sum_probs=15.0
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|+|.+|+|||||..
T Consensus 5 ~I~lvG~~n~GKSTLin 21 (274)
T 3i8s_A 5 TIGLIGNPNSGKTTLFN 21 (274)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999754
No 491
>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B
Probab=72.48 E-value=0.75 Score=49.08 Aligned_cols=15 Identities=20% Similarity=0.364 Sum_probs=13.8
Q ss_pred EEEEecCCCCccccc
Q 013022 337 ALFFGLSGTGKTTLS 351 (451)
Q Consensus 337 alffGLSGTGKTTLS 351 (451)
+++.|+||+|||||.
T Consensus 48 iaIvG~nGsGKSTLL 62 (608)
T 3szr_A 48 IAVIGDQSSGKSSVL 62 (608)
T ss_dssp EECCCCTTSCHHHHH
T ss_pred EEEECCCCChHHHHH
Confidence 899999999999964
No 492
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B*
Probab=72.41 E-value=1.2 Score=42.35 Aligned_cols=17 Identities=41% Similarity=0.530 Sum_probs=13.7
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|++||||||++.
T Consensus 50 ~~L~~G~~G~GKT~la~ 66 (324)
T 3u61_B 50 IILHSPSPGTGKTTVAK 66 (324)
T ss_dssp EEEECSSTTSSHHHHHH
T ss_pred EEEeeCcCCCCHHHHHH
Confidence 46677789999999764
No 493
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=72.40 E-value=1.3 Score=44.89 Aligned_cols=21 Identities=19% Similarity=0.344 Sum_probs=18.7
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..|+.+++.|.+|+|||||+.
T Consensus 198 ~~G~l~ii~G~pg~GKT~lal 218 (444)
T 2q6t_A 198 GPGSLNIIAARPAMGKTAFAL 218 (444)
T ss_dssp CTTCEEEEEECTTSCHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHH
Confidence 457899999999999999875
No 494
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=72.21 E-value=1.3 Score=44.60 Aligned_cols=20 Identities=35% Similarity=0.591 Sum_probs=17.6
Q ss_pred CCCEEEEEecCCCCcccccc
Q 013022 333 DGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 333 ~G~valffGLSGTGKTTLSa 352 (451)
.|+.++|+|.+|+|||||+.
T Consensus 73 ~G~li~I~G~pGsGKTtlal 92 (366)
T 1xp8_A 73 RGRITEIYGPESGGKTTLAL 92 (366)
T ss_dssp TTSEEEEEESTTSSHHHHHH
T ss_pred CCcEEEEEcCCCCChHHHHH
Confidence 46789999999999999875
No 495
>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12
Probab=72.09 E-value=0.34 Score=45.74 Aligned_cols=16 Identities=38% Similarity=0.486 Sum_probs=13.5
Q ss_pred EEEEEecCCCCccccc
Q 013022 336 VALFFGLSGTGKTTLS 351 (451)
Q Consensus 336 valffGLSGTGKTTLS 351 (451)
++++.|+||||||||.
T Consensus 29 ~~~i~GpnGsGKSTll 44 (227)
T 1qhl_A 29 VTTLSGGNGAGKSTTM 44 (227)
T ss_dssp HHHHHSCCSHHHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4678899999999964
No 496
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=71.84 E-value=1.2 Score=49.71 Aligned_cols=18 Identities=39% Similarity=0.652 Sum_probs=16.1
Q ss_pred CEEEEEecCCCCcccccc
Q 013022 335 DVALFFGLSGTGKTTLST 352 (451)
Q Consensus 335 ~valffGLSGTGKTTLSa 352 (451)
+.++|+|++|||||+|+.
T Consensus 239 ~GILL~GPPGTGKT~LAr 256 (806)
T 3cf2_A 239 RGILLYGPPGTGKTLIAR 256 (806)
T ss_dssp CEEEEECCTTSCHHHHHH
T ss_pred CeEEEECCCCCCHHHHHH
Confidence 569999999999999874
No 497
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=71.16 E-value=1 Score=44.78 Aligned_cols=16 Identities=44% Similarity=0.617 Sum_probs=14.3
Q ss_pred EEEEecCCCCcccccc
Q 013022 337 ALFFGLSGTGKTTLST 352 (451)
Q Consensus 337 alffGLSGTGKTTLSa 352 (451)
++++|.||+|||||..
T Consensus 40 I~vvG~~g~GKSTLln 55 (361)
T 2qag_A 40 LMVVGESGLGKSTLIN 55 (361)
T ss_dssp EEECCCTTSCHHHHHH
T ss_pred EEEEcCCCCCHHHHHH
Confidence 7999999999999654
No 498
>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} SCOP: c.37.1.8 d.52.3.1 PDB: 1x1l_X 3ieu_A* 1x18_X
Probab=70.93 E-value=1.4 Score=42.49 Aligned_cols=17 Identities=29% Similarity=0.405 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++++|.+|+|||||..
T Consensus 10 ~VaIvG~~nvGKSTLln 26 (301)
T 1ega_A 10 FIAIVGRPNVGKSTLLN 26 (301)
T ss_dssp EEEEECSSSSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58999999999999764
No 499
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=70.81 E-value=1.4 Score=47.56 Aligned_cols=17 Identities=29% Similarity=0.597 Sum_probs=15.1
Q ss_pred EEEEEecCCCCcccccc
Q 013022 336 VALFFGLSGTGKTTLST 352 (451)
Q Consensus 336 valffGLSGTGKTTLSa 352 (451)
.++|.|++||||||++.
T Consensus 203 ~vLL~G~pGtGKT~la~ 219 (758)
T 3pxi_A 203 NPVLIGEPGVGKTAIAE 219 (758)
T ss_dssp EEEEESCTTTTTHHHHH
T ss_pred CeEEECCCCCCHHHHHH
Confidence 48999999999999764
No 500
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=70.81 E-value=1.5 Score=43.08 Aligned_cols=21 Identities=24% Similarity=0.205 Sum_probs=17.8
Q ss_pred CCCCEEEEEecCCCCcccccc
Q 013022 332 KDGDVALFFGLSGTGKTTLST 352 (451)
Q Consensus 332 ~~G~valffGLSGTGKTTLSa 352 (451)
..+.+++|.|.+|+|||||..
T Consensus 54 ~~~~~i~i~G~~g~GKSTl~~ 74 (341)
T 2p67_A 54 GNTLRLGVTGTPGAGKSTFLE 74 (341)
T ss_dssp SCSEEEEEEECTTSCHHHHHH
T ss_pred CCCEEEEEEcCCCCCHHHHHH
Confidence 456789999999999999764
Done!