Query 013023
Match_columns 451
No_of_seqs 258 out of 1966
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 08:45:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013023.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013023hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 6E-39 1.3E-43 327.5 37.0 293 106-438 46-350 (350)
2 TIGR00817 tpt Tpt phosphate/ph 100.0 6.7E-38 1.4E-42 313.0 32.1 292 109-439 2-296 (302)
3 KOG1441 Glucose-6-phosphate/ph 100.0 1.6E-39 3.5E-44 323.6 12.4 293 106-443 14-314 (316)
4 KOG1443 Predicted integral mem 100.0 2.2E-28 4.8E-33 236.8 19.6 289 106-435 13-314 (349)
5 PF08449 UAA: UAA transporter 99.9 4.4E-25 9.5E-30 221.1 31.6 283 114-441 5-302 (303)
6 KOG1444 Nucleotide-sugar trans 99.9 1.9E-24 4.1E-29 212.0 24.5 285 115-443 18-307 (314)
7 PLN00411 nodulin MtN21 family 99.9 1E-22 2.2E-27 208.4 33.6 277 119-441 23-333 (358)
8 PRK11689 aromatic amino acid e 99.9 2.5E-21 5.4E-26 193.2 33.0 266 109-437 8-288 (295)
9 PRK11272 putative DMT superfam 99.9 8.7E-21 1.9E-25 189.0 35.6 262 123-438 22-287 (292)
10 KOG1442 GDP-fucose transporter 99.9 1.3E-24 2.8E-29 207.7 6.7 292 110-447 29-338 (347)
11 TIGR00950 2A78 Carboxylate/Ami 99.9 8.9E-21 1.9E-25 184.4 31.4 250 125-431 5-259 (260)
12 PRK10532 threonine and homoser 99.9 2E-20 4.4E-25 186.5 31.2 253 126-440 29-285 (293)
13 PRK11453 O-acetylserine/cystei 99.9 6.3E-20 1.4E-24 183.4 33.3 262 125-439 20-290 (299)
14 KOG1581 UDP-galactose transpor 99.9 2.4E-20 5.3E-25 181.3 24.4 287 106-440 11-317 (327)
15 PF06027 DUF914: Eukaryotic pr 99.9 5.3E-20 1.1E-24 185.8 27.4 273 123-442 27-311 (334)
16 PRK15430 putative chlorampheni 99.9 5.4E-19 1.2E-23 176.5 33.4 258 126-439 25-288 (296)
17 KOG1580 UDP-galactose transpor 99.8 4.7E-20 1E-24 173.2 13.3 269 123-439 27-316 (337)
18 COG5070 VRG4 Nucleotide-sugar 99.8 1.9E-18 4.2E-23 161.3 18.3 277 116-441 13-301 (309)
19 TIGR03340 phn_DUF6 phosphonate 99.8 2.9E-17 6.3E-22 162.7 26.8 259 122-433 14-280 (281)
20 COG0697 RhaT Permeases of the 99.8 2.3E-15 4.9E-20 147.1 34.5 260 125-437 23-288 (292)
21 PF03151 TPT: Triose-phosphate 99.7 1E-16 2.2E-21 143.8 16.2 145 292-436 1-153 (153)
22 KOG1582 UDP-galactose transpor 99.7 1.1E-15 2.5E-20 146.4 19.4 290 102-438 36-334 (367)
23 TIGR00688 rarD rarD protein. T 99.7 4.8E-14 1.1E-18 137.6 29.9 231 125-411 18-255 (256)
24 COG5006 rhtA Threonine/homoser 99.6 1E-13 2.2E-18 132.1 25.7 249 128-437 31-283 (292)
25 KOG1583 UDP-N-acetylglucosamin 99.6 8.1E-16 1.7E-20 147.9 8.9 268 126-442 20-320 (330)
26 TIGR00776 RhaT RhaT L-rhamnose 99.6 6.7E-13 1.5E-17 132.5 28.6 250 126-436 18-288 (290)
27 KOG4510 Permease of the drug/m 99.6 2.8E-16 6.1E-21 150.4 4.1 269 118-440 47-329 (346)
28 PF04142 Nuc_sug_transp: Nucle 99.5 1.9E-12 4.1E-17 126.2 22.8 212 169-427 14-244 (244)
29 KOG2765 Predicted membrane pro 99.5 5E-13 1.1E-17 133.7 14.1 222 172-439 159-393 (416)
30 KOG2234 Predicted UDP-galactos 99.4 1.6E-10 3.4E-15 115.8 27.5 223 172-441 92-327 (345)
31 COG2962 RarD Predicted permeas 99.4 6.9E-10 1.5E-14 108.6 31.1 185 245-444 106-291 (293)
32 KOG3912 Predicted integral mem 99.4 8.6E-11 1.9E-15 113.7 21.1 227 173-438 87-336 (372)
33 TIGR00803 nst UDP-galactose tr 99.1 1.4E-09 3.1E-14 104.0 12.3 179 245-434 12-222 (222)
34 PF00892 EamA: EamA-like trans 99.0 3.8E-09 8.2E-14 90.2 11.2 119 123-282 5-125 (126)
35 PF00892 EamA: EamA-like trans 98.9 1.7E-08 3.8E-13 86.1 11.2 124 301-435 1-125 (126)
36 KOG2766 Predicted membrane pro 98.9 3.9E-10 8.4E-15 108.0 -0.1 262 124-440 33-303 (336)
37 PF06800 Sugar_transport: Suga 98.8 6E-07 1.3E-11 88.3 21.6 211 169-433 42-268 (269)
38 COG2510 Predicted membrane pro 98.8 4.7E-08 1E-12 84.7 9.6 133 293-434 5-137 (140)
39 PRK15430 putative chlorampheni 98.7 1.6E-06 3.5E-11 86.7 18.7 142 286-435 3-144 (296)
40 KOG4314 Predicted carbohydrate 98.6 1.5E-07 3.1E-12 87.4 9.0 219 171-440 52-280 (290)
41 TIGR00688 rarD rarD protein. T 98.6 2.1E-06 4.6E-11 83.8 17.8 140 291-435 2-141 (256)
42 PF13536 EmrE: Multidrug resis 98.6 3E-07 6.4E-12 78.9 9.3 105 143-287 2-110 (113)
43 COG2510 Predicted membrane pro 98.5 1.1E-06 2.4E-11 76.3 11.1 119 125-283 19-139 (140)
44 TIGR03340 phn_DUF6 phosphonate 98.5 5.5E-06 1.2E-10 82.1 16.1 133 293-436 3-135 (281)
45 PLN00411 nodulin MtN21 family 98.4 1.8E-05 3.9E-10 81.6 17.3 137 291-436 13-156 (358)
46 TIGR00950 2A78 Carboxylate/Ami 98.3 5E-05 1.1E-09 73.7 17.4 118 122-279 141-260 (260)
47 PRK10532 threonine and homoser 98.0 0.00041 8.9E-09 69.3 17.4 120 122-283 161-281 (293)
48 PRK13499 rhamnose-proton sympo 98.0 0.0076 1.6E-07 61.7 26.6 228 168-437 69-342 (345)
49 PRK11689 aromatic amino acid e 98.0 0.00031 6.6E-09 70.2 16.2 130 291-436 4-137 (295)
50 PRK11272 putative DMT superfam 97.9 0.0005 1.1E-08 68.6 17.1 129 294-436 11-141 (292)
51 PTZ00343 triose or hexose phos 97.9 0.00062 1.3E-08 69.9 17.5 126 302-436 60-186 (350)
52 PRK11453 O-acetylserine/cystei 97.9 0.00041 8.9E-09 69.4 15.6 124 294-436 7-132 (299)
53 COG2962 RarD Predicted permeas 97.9 0.00072 1.6E-08 66.8 16.6 140 289-437 5-145 (293)
54 PF05653 Mg_trans_NIPA: Magnes 97.9 8.6E-05 1.9E-09 74.7 10.4 68 176-282 53-121 (300)
55 PRK15051 4-amino-4-deoxy-L-ara 97.9 0.00045 9.7E-09 59.4 13.3 65 180-283 45-109 (111)
56 PRK02971 4-amino-4-deoxy-L-ara 97.8 0.00064 1.4E-08 60.0 13.3 120 291-437 2-123 (129)
57 TIGR00817 tpt Tpt phosphate/ph 97.7 0.0012 2.7E-08 65.9 15.8 120 305-435 16-136 (302)
58 PF13536 EmrE: Multidrug resis 97.5 0.0045 9.7E-08 52.9 13.7 72 367-439 37-109 (113)
59 TIGR00776 RhaT RhaT L-rhamnose 97.4 0.0026 5.6E-08 63.6 12.9 132 292-438 2-138 (290)
60 COG0697 RhaT Permeases of the 97.3 0.019 4.1E-07 55.7 17.3 119 123-284 168-288 (292)
61 PF03151 TPT: Triose-phosphate 97.3 0.014 3.1E-07 51.8 15.2 125 119-282 10-152 (153)
62 PF08449 UAA: UAA transporter 96.9 0.0094 2E-07 59.8 11.9 126 303-441 12-141 (303)
63 PRK15051 4-amino-4-deoxy-L-ara 96.9 0.012 2.7E-07 50.5 10.4 53 383-435 56-108 (111)
64 PRK02971 4-amino-4-deoxy-L-ara 96.8 0.0096 2.1E-07 52.6 9.1 67 180-285 56-124 (129)
65 KOG2922 Uncharacterized conser 96.7 0.003 6.6E-08 63.2 6.0 203 181-438 73-308 (335)
66 COG4975 GlcU Putative glucose 96.7 0.00041 8.9E-09 66.9 -0.1 215 167-435 54-284 (288)
67 PF04142 Nuc_sug_transp: Nucle 96.6 0.006 1.3E-07 59.6 7.5 77 364-440 17-93 (244)
68 PRK13499 rhamnose-proton sympo 96.5 0.088 1.9E-06 54.0 15.1 140 290-439 6-156 (345)
69 PRK10452 multidrug efflux syst 96.4 0.033 7.2E-07 48.6 10.0 72 175-284 33-104 (120)
70 PRK11431 multidrug efflux syst 96.4 0.042 9E-07 46.8 10.1 70 176-283 33-102 (105)
71 PRK10650 multidrug efflux syst 96.2 0.082 1.8E-06 45.3 11.2 70 175-282 38-107 (109)
72 PRK09541 emrE multidrug efflux 96.2 0.052 1.1E-06 46.6 9.9 69 178-284 36-104 (110)
73 PF06027 DUF914: Eukaryotic pr 96.1 0.15 3.3E-06 52.2 14.7 68 370-437 85-152 (334)
74 COG2076 EmrE Membrane transpor 96.1 0.039 8.6E-07 46.9 8.7 71 176-284 34-104 (106)
75 PF04657 DUF606: Protein of un 96.1 0.22 4.8E-06 44.4 13.9 130 293-433 3-138 (138)
76 PRK10452 multidrug efflux syst 95.9 0.047 1E-06 47.6 8.4 54 385-438 51-105 (120)
77 PRK10650 multidrug efflux syst 95.9 0.35 7.5E-06 41.5 13.4 51 385-435 56-107 (109)
78 COG5006 rhtA Threonine/homoser 95.7 0.24 5.1E-06 48.5 13.2 122 119-281 158-280 (292)
79 PRK09541 emrE multidrug efflux 95.3 0.18 4E-06 43.2 10.0 55 384-438 50-105 (110)
80 COG2076 EmrE Membrane transpor 95.3 0.32 6.8E-06 41.5 10.9 53 385-437 51-104 (106)
81 PF04657 DUF606: Protein of un 95.1 0.67 1.5E-05 41.3 13.4 116 126-280 18-138 (138)
82 PRK11431 multidrug efflux syst 94.9 0.27 6E-06 41.8 9.8 52 385-436 50-102 (105)
83 KOG2234 Predicted UDP-galactos 94.6 1.7 3.7E-05 44.4 16.0 116 317-435 45-163 (345)
84 PF07857 DUF1632: CEO family ( 94.2 0.06 1.3E-06 52.9 4.7 132 292-441 1-139 (254)
85 PF00893 Multi_Drug_Res: Small 94.2 0.3 6.6E-06 40.4 8.2 57 180-274 37-93 (93)
86 TIGR00803 nst UDP-galactose tr 93.8 0.62 1.3E-05 44.4 10.7 66 176-280 156-221 (222)
87 PF05653 Mg_trans_NIPA: Magnes 93.6 0.57 1.2E-05 47.3 10.5 119 288-436 4-122 (300)
88 PF06800 Sugar_transport: Suga 93.1 2.3 5E-05 42.3 13.6 69 172-279 195-267 (269)
89 PF06379 RhaT: L-rhamnose-prot 91.8 7 0.00015 40.0 15.3 147 290-444 6-161 (344)
90 COG3238 Uncharacterized protei 91.0 8.5 0.00018 34.9 13.5 136 290-435 4-145 (150)
91 KOG1581 UDP-galactose transpor 90.3 5.2 0.00011 40.3 12.4 132 109-280 172-310 (327)
92 KOG4510 Permease of the drug/m 90.0 0.1 2.2E-06 51.3 0.4 56 380-435 113-168 (346)
93 PF10639 UPF0546: Uncharacteri 89.7 0.82 1.8E-05 39.4 5.6 71 172-281 42-112 (113)
94 PF00893 Multi_Drug_Res: Small 88.0 2.7 5.9E-05 34.7 7.5 45 383-427 48-93 (93)
95 COG3238 Uncharacterized protei 87.4 19 0.0004 32.7 13.0 118 126-282 22-145 (150)
96 KOG2765 Predicted membrane pro 86.2 0.5 1.1E-05 48.6 2.5 76 364-439 159-234 (416)
97 KOG4314 Predicted carbohydrate 83.6 0.7 1.5E-05 43.7 2.0 64 377-440 66-129 (290)
98 COG4975 GlcU Putative glucose 78.5 0.63 1.4E-05 45.4 -0.2 132 292-439 3-139 (288)
99 PF10639 UPF0546: Uncharacteri 77.3 3.9 8.5E-05 35.3 4.4 38 396-433 74-111 (113)
100 KOG1441 Glucose-6-phosphate/ph 74.4 14 0.0003 37.7 8.2 134 109-283 163-307 (316)
101 KOG1580 UDP-galactose transpor 70.1 10 0.00022 37.0 5.7 37 245-281 275-311 (337)
102 COG3169 Uncharacterized protei 61.9 98 0.0021 26.2 10.7 30 252-281 84-113 (116)
103 KOG1444 Nucleotide-sugar trans 58.2 2.2E+02 0.0048 29.0 13.5 130 293-435 14-148 (314)
104 PRK02237 hypothetical protein; 55.1 19 0.00041 30.8 4.0 36 249-284 71-106 (109)
105 COG5070 VRG4 Nucleotide-sugar 54.7 1.8E+02 0.0038 28.5 10.9 120 121-280 167-293 (309)
106 PF02694 UPF0060: Uncharacteri 54.7 16 0.00035 31.1 3.6 37 249-285 69-105 (107)
107 PF04342 DUF486: Protein of un 51.0 1.3E+02 0.0029 25.7 8.4 30 252-281 77-106 (108)
108 PF04342 DUF486: Protein of un 50.5 1.2E+02 0.0026 26.0 8.0 28 405-432 77-104 (108)
109 PF08627 CRT-like: CRT-like; 50.5 12 0.00027 32.8 2.3 42 107-148 55-97 (130)
110 KOG2922 Uncharacterized conser 46.5 15 0.00032 37.4 2.4 120 288-437 18-137 (335)
111 KOG3912 Predicted integral mem 42.1 67 0.0014 32.4 6.1 49 386-434 108-156 (372)
112 COG1742 Uncharacterized conser 41.8 29 0.00064 29.5 3.1 37 249-285 70-106 (109)
113 COG3169 Uncharacterized protei 41.5 2.2E+02 0.0048 24.1 9.6 37 397-433 72-112 (116)
114 COG3086 RseC Positive regulato 31.8 2E+02 0.0043 26.1 6.9 27 386-412 70-96 (150)
115 PRK10263 DNA translocase FtsK; 31.1 5E+02 0.011 31.8 11.9 27 236-262 75-101 (1355)
116 PF07444 Ycf66_N: Ycf66 protei 30.0 67 0.0015 26.3 3.4 29 415-443 4-32 (84)
117 PRK10712 PTS system fructose-s 29.3 8.2E+02 0.018 27.1 15.3 57 245-313 280-336 (563)
118 PRK02237 hypothetical protein; 27.7 1.3E+02 0.0028 25.8 4.9 44 393-436 62-105 (109)
119 PF05977 MFS_3: Transmembrane 27.6 8.2E+02 0.018 26.6 16.5 28 384-411 340-367 (524)
120 KOG1582 UDP-galactose transpor 26.5 4E+02 0.0087 26.9 8.6 40 249-288 298-337 (367)
121 PF02694 UPF0060: Uncharacteri 24.0 1.3E+02 0.0029 25.7 4.2 44 393-436 60-103 (107)
122 PF04246 RseC_MucC: Positive r 22.4 2.2E+02 0.0047 24.8 5.6 43 389-432 66-108 (135)
123 cd01324 cbb3_Oxidase_CcoQ Cyto 21.9 1.2E+02 0.0025 22.1 3.1 23 424-446 19-41 (48)
124 KOG4831 Unnamed protein [Funct 21.6 1.3E+02 0.0028 25.8 3.7 37 245-281 87-123 (125)
125 COG5373 Predicted membrane pro 20.7 1.4E+03 0.03 26.7 16.9 15 122-136 145-161 (931)
126 PF11139 DUF2910: Protein of u 20.6 7.1E+02 0.015 23.3 14.4 49 109-157 30-84 (214)
127 PF06946 Phage_holin_5: Phage 20.2 4.9E+02 0.011 21.8 6.7 60 384-443 24-87 (93)
128 PF06379 RhaT: L-rhamnose-prot 20.1 9.8E+02 0.021 24.8 25.8 235 168-436 69-340 (344)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=6e-39 Score=327.53 Aligned_cols=293 Identities=37% Similarity=0.632 Sum_probs=255.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHHHHH
Q 013023 106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID--SKLLKLLIPVAVCHA 183 (451)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~ 183 (451)
..+++..+|+.||++|...+++||++++.+|+|++++++|++++++++.+.|..+.+++++.+ +++++.++|.|+++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999998887777766555444443 457899999999999
Q ss_pred HHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCccc
Q 013023 184 LGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQL 263 (451)
Q Consensus 184 ~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~ 263 (451)
..+...+.|++++++++++++| +++|+|++++++++++||+
T Consensus 126 ~~~~~~~~sl~~~svs~~~iik---------------------------------------a~~Pvft~lls~~~l~ek~ 166 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVK---------------------------------------AAEPVFTALLSILFLKQFL 166 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHH---------------------------------------HhhHHHHHHHHHHHhCCCc
Confidence 8888899999999999999999 9999999999999999999
Q ss_pred ChhHHHHHHHHHHHhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhhcCC-------CChHHHHHHHHHHHHHHHHH
Q 013023 264 PLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD-------MDSTNIYAYISIIALFVCIP 336 (451)
Q Consensus 264 ~~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~-------~~~~~l~~~~~~~s~l~llp 336 (451)
+++++++++++++|+.+++.+|.++++.|++++++|++++++++++.||.+++ +++.+++.++.+++.++++|
T Consensus 167 s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp 246 (350)
T PTZ00343 167 NLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLP 246 (350)
T ss_pred cHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999898999999999999999999999999998864 56778888889999999999
Q ss_pred HHHHhhchhhhhcchhh---hhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 013023 337 PAIIVEGPQLIKHGLSD---AISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFG 413 (451)
Q Consensus 337 ~al~~e~~~~~~~~~~~---~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fg 413 (451)
+....|++.... .+.+ ..........+..++..+++++++|...|..+++++|+++++.+++||++++++|+++||
T Consensus 247 ~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~g 325 (350)
T PTZ00343 247 LVLFFEGKKWVP-VWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQ 325 (350)
T ss_pred HHHHHhhHHHHH-HHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhC
Confidence 988777653211 1111 011111223344567789999999999999999999999999999999999999999999
Q ss_pred CcCchhhHHHHHHHHHHHHHHHhhh
Q 013023 414 NKISTQTGIGTVIAIAGVAAYSYIK 438 (451)
Q Consensus 414 e~ls~~~iiG~~lii~Gv~ly~~~~ 438 (451)
|++|..+++|.++++.|+++|++.|
T Consensus 326 e~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 326 TQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred CCCchHhHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999764
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=6.7e-38 Score=312.96 Aligned_cols=292 Identities=61% Similarity=0.999 Sum_probs=250.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013023 109 VTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVT 188 (451)
Q Consensus 109 ~~~~~~~~w~~~~~~~~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 188 (451)
++..++..||++|.+++++||++++++++|++++++|++++++.+.+.+..+.+++++.++++++.+++.|++++.++.+
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 57789999999999999999999999999999999999999887776665555566667889999999999999999999
Q ss_pred HHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHH
Q 013023 189 SNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLW 268 (451)
Q Consensus 189 ~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~ 268 (451)
.|.+++|++++++++++ ++.|++++++++++++||++++++
T Consensus 82 ~~~~l~~~s~s~~~li~---------------------------------------~~~Pv~~~ll~~~~~~e~~~~~~~ 122 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIK---------------------------------------AMEPFFSVVLSAFFLGQEFPSTLW 122 (302)
T ss_pred HHHHHHhccHHHHHHHH---------------------------------------hcchHHHHHHHHHHhCCCCcHHHH
Confidence 99999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHHHhhchhh
Q 013023 269 LSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQL 346 (451)
Q Consensus 269 lsl~~~~~Gv~l~~~~~~~~~~~G~~l~l~s~l~~al~~v~~kk~~~--~~~~~~l~~~~~~~s~l~llp~al~~e~~~~ 346 (451)
++++++++|+.+...++.+++..|++++++++++|++++++.||..+ ++|+.+++.|+++.+.++++|++...|++..
T Consensus 123 ~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 202 (302)
T TIGR00817 123 LSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPF 202 (302)
T ss_pred HHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHH
Confidence 99999999999888777778888999999999999999999999988 8999999999999999999999887776543
Q ss_pred hhcchhhhhhhhchHHHHHHHHHHHH-HHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHH
Q 013023 347 IKHGLSDAISKVGMVKFISDLFWVGM-FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTV 425 (451)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~l~~~gi-~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~ 425 (451)
..+++............+...+..+. +...+|...+..+++++|.++++.+++||++++++|++++||+++..+++|.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~ 282 (302)
T TIGR00817 203 LPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTG 282 (302)
T ss_pred HHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHH
Confidence 22111111000111122222333333 55567777788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhh
Q 013023 426 IAIAGVAAYSYIKA 439 (451)
Q Consensus 426 lii~Gv~ly~~~~~ 439 (451)
++++|+++|++.|.
T Consensus 283 lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 283 IAIAGVFLYSRVKA 296 (302)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999996543
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-39 Score=323.61 Aligned_cols=293 Identities=38% Similarity=0.548 Sum_probs=262.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHHHH
Q 013023 106 PALVTGFFFFMWYFLNVIFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID-SKLLKLLIPVAVCH 182 (451)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~i~nK~ll~--~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 182 (451)
+.+..+.++..||++|++++++||++++ +||+|++++.+|.+++.+...+.+..+..++.+.+ +.+++.++|+|+++
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~ 93 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF 93 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence 4567888999999999999999999999 89999999999999999998888888887777664 46899999999999
Q ss_pred HHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcc
Q 013023 183 ALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQ 262 (451)
Q Consensus 183 ~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek 262 (451)
+++++++|.|+.+++|+|+|++| +++|++++++++++.+|+
T Consensus 94 ~~~~v~~n~Sl~~v~VsF~q~iK---------------------------------------a~~P~~tvl~~~~~~~~~ 134 (316)
T KOG1441|consen 94 CISHVLGNVSLSYVPVSFYQTIK---------------------------------------ALMPPFTVLLSVLLLGKT 134 (316)
T ss_pred HHHHHhcchhhhccchhHHHHHH---------------------------------------hhcchhHHHHHHHHhCCC
Confidence 99999999999999999999999 999999999999999999
Q ss_pred cChhHHHHHHHHHHHhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhhcC----CCChHHHHHHHHHHHHHHHH-HH
Q 013023 263 LPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT----DMDSTNIYAYISIIALFVCI-PP 337 (451)
Q Consensus 263 ~~~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~~l~l~s~l~~al~~v~~kk~~~----~~~~~~l~~~~~~~s~l~ll-p~ 337 (451)
+++..++++++++.||.+++.+|.++|+.|++.++++++..++++++.|+.++ ++|+.+++.|+++++.++++ |+
T Consensus 135 ~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~ 214 (316)
T KOG1441|consen 135 YSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPF 214 (316)
T ss_pred CcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcch
Confidence 99999999999999999999999999999999999999999999999999884 48999999999999999999 88
Q ss_pred HHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCc
Q 013023 338 AIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKIS 417 (451)
Q Consensus 338 al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls 417 (451)
....|++.. . ++.. ..... ..+..++.. ++++++|+..|.+++++||+|+++.+++|++++++.|+++|++++|
T Consensus 215 ~~~~~~~~~-~-~~~~--~~~~~-~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt 288 (316)
T KOG1441|consen 215 LDYVEGNKF-V-GFLT--APWFV-TFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVT 288 (316)
T ss_pred Hhhhcccce-e-eeec--cccch-hhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCc
Confidence 888777665 1 2211 01111 123333333 9999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHH
Q 013023 418 TQTGIGTVIAIAGVAAYSYIKAQMEE 443 (451)
Q Consensus 418 ~~~iiG~~lii~Gv~ly~~~~~~~~~ 443 (451)
+.|..|++++++|+++|++.|.++++
T Consensus 289 ~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 289 FLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 99999999999999999998876544
No 4
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.96 E-value=2.2e-28 Score=236.85 Aligned_cols=289 Identities=20% Similarity=0.309 Sum_probs=246.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHh-C--CCC-CCCCC-HHHHHHHHHHHH
Q 013023 106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAV-G--LPK-RAPID-SKLLKLLIPVAV 180 (451)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~-~--~~~-~~~~~-~~~~~~~~~~~l 180 (451)
.++....++++||+++++..+++|+.-.+|++|++++..|+++-.++.....+. + .++ +.+.+ +++++++.|+|+
T Consensus 13 ~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal 92 (349)
T KOG1443|consen 13 NRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL 92 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh
Confidence 355677777999999999999999999999999999999999998876554432 1 121 22333 457888999999
Q ss_pred HHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhC
Q 013023 181 CHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILG 260 (451)
Q Consensus 181 ~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ 260 (451)
+.+++++++|+|+.|+++++|+|+| +..++|+.+++.++.-
T Consensus 93 ata~DIGLSN~sl~yVtlSlYTM~K---------------------------------------SSsi~FIllFs~if~l 133 (349)
T KOG1443|consen 93 ATALDIGLSNWSLEYVTLSLYTMTK---------------------------------------SSSILFILLFSLIFKL 133 (349)
T ss_pred hhhcccccccceeeeeeeeeeeecc---------------------------------------ccHHHHHHHHHHHHHh
Confidence 9999999999999999999999999 7888888888888888
Q ss_pred cccChhHHHHHHHHHHHhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhhcCC-----CChHHHHHHHHHHHHHHHH
Q 013023 261 QQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD-----MDSTNIYAYISIIALFVCI 335 (451)
Q Consensus 261 ek~~~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~-----~~~~~l~~~~~~~s~l~ll 335 (451)
||+++...+.+.++.+|+.++++++.+++..|+.+.+.+.++.+++-.+.|+.+++ -+|.+.+++..+.+.+.++
T Consensus 134 Ek~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll 213 (349)
T KOG1443|consen 134 EKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLL 213 (349)
T ss_pred HHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHH
Confidence 99999999999999999999999999999999999998888877777777766643 4799999999999999999
Q ss_pred HHHHHhhchhhhhcchhhhhhhhch---HHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHh
Q 013023 336 PPAIIVEGPQLIKHGLSDAISKVGM---VKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAF 412 (451)
Q Consensus 336 p~al~~e~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~f 412 (451)
|..+.+||+.... +...+...+. ......+...|..+++...+.|.++.+++.++.++.+..|.+.+.+++.++.
T Consensus 214 ~~~l~fEG~~~~~--~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~ 291 (349)
T KOG1443|consen 214 PLSLLFEGLHLIT--SSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIIL 291 (349)
T ss_pred HHHHHHcccccch--hhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHh
Confidence 9999999987532 2233332222 2234456678899999999999999999999999999999999999999999
Q ss_pred CCcCchhhHHHHHHHHHHHHHHH
Q 013023 413 GNKISTQTGIGTVIAIAGVAAYS 435 (451)
Q Consensus 413 ge~ls~~~iiG~~lii~Gv~ly~ 435 (451)
+|.++..+++|..+..+|+..|.
T Consensus 292 ~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 292 KDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred hcchhhhHHHHHHHHHHHHHHhc
Confidence 99999999999999999999993
No 5
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.95 E-value=4.4e-25 Score=221.11 Aligned_cols=283 Identities=18% Similarity=0.261 Sum_probs=232.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcc--C-CcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 013023 114 FFMWYFLNVIFNILNKRIYNY--F-PYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSN 190 (451)
Q Consensus 114 ~~~w~~~~~~~~i~nK~ll~~--f-~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 190 (451)
+.+.|.+.....++++++.+. . ++|+++++.|+++..+...+...... .++.++..++.+++.++++.+...++|
T Consensus 5 ~~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (303)
T PF08449_consen 5 VAGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSN 82 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHH
Confidence 445566666677888888775 3 36999999999999887665544322 122345567889999999999999999
Q ss_pred HhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHH
Q 013023 191 VSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLS 270 (451)
Q Consensus 191 ~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~ls 270 (451)
.+++|++++++++.| ++.|+++++++++++|||+++++|++
T Consensus 83 ~al~~i~~p~~~~~k---------------------------------------s~~~i~vmi~~~l~~~k~y~~~~~~~ 123 (303)
T PF08449_consen 83 AALKYISYPTQIVFK---------------------------------------SSKPIPVMILGVLILGKRYSRRQYLS 123 (303)
T ss_pred HHHHhCChHHHHHHh---------------------------------------hhHHHHHHHHHHHhcCccccHHHHHH
Confidence 999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHhhhhcccccc----c------cHHHHHHHHHHHHHHHHHHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHH
Q 013023 271 LAPVVIGVSMASLTELS----F------NWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPA 338 (451)
Q Consensus 271 l~~~~~Gv~l~~~~~~~----~------~~~G~~l~l~s~l~~al~~v~~kk~~~--~~~~~~l~~~~~~~s~l~llp~a 338 (451)
++++++|+++....|.. . ...|+++.+++.+++++..+++||.++ +.++.++++|.+.++.++.++..
T Consensus 124 v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~ 203 (303)
T PF08449_consen 124 VLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILL 203 (303)
T ss_pred HHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998765421 1 134999999999999999999999885 56889999999999999888887
Q ss_pred HHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCch
Q 013023 339 IIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKIST 418 (451)
Q Consensus 339 l~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~ 418 (451)
...+..+. ...+.- ....+..+..++..++++++.+...+.++++.+|++.++.+++++++++++|+++||+++++
T Consensus 204 ~~l~~~~~-~~~~~f---~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~ 279 (303)
T PF08449_consen 204 FLLPTGEF-RSAIRF---ISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSP 279 (303)
T ss_pred HHHHhhHh-hHHHHH---HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCCh
Confidence 76321111 111110 11233467778888888988888889999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhH
Q 013023 419 QTGIGTVIAIAGVAAYSYIKAQM 441 (451)
Q Consensus 419 ~~iiG~~lii~Gv~ly~~~~~~~ 441 (451)
.+++|.++++.|..+|++.|+|+
T Consensus 280 ~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 280 LQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHHHHHhHHHHHHHHHhhccC
Confidence 99999999999999999887754
No 6
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=1.9e-24 Score=212.05 Aligned_cols=285 Identities=18% Similarity=0.259 Sum_probs=248.9
Q ss_pred HHHHHHHHHHHHHHHHHHccCCcHHHHHH--HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 013023 115 FMWYFLNVIFNILNKRIYNYFPYPYFVSV--IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVS 192 (451)
Q Consensus 115 ~~w~~~~~~~~i~nK~ll~~f~~P~~lt~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s 192 (451)
+.|-.+++.+.+.||++++.++||..+.. .|++++.+...+....|.-+.++++++..|+++|+++++.+++..+..+
T Consensus 18 ~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~s 97 (314)
T KOG1444|consen 18 LFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKS 97 (314)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHcccc
Confidence 44445788899999999999888876666 9999999888888888888889999999999999999999999999999
Q ss_pred hhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHH
Q 013023 193 FAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLA 272 (451)
Q Consensus 193 l~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~ 272 (451)
++|++++.+++.| ...|+++++....+++++++...|.++.
T Consensus 98 lk~lnVpm~tv~k---------------------------------------n~tii~~ai~E~lf~~~~~~~~v~~Sv~ 138 (314)
T KOG1444|consen 98 LKYLNVPMFTVFK---------------------------------------NLTIILTAIGEVLFFGKRPSNKVWASVF 138 (314)
T ss_pred ccccCchHHHHHh---------------------------------------hchHHHHHHhHHhhcCcCchhhHHHHHH
Confidence 9999999999999 9999999999999999999999999999
Q ss_pred HHHHHhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcc
Q 013023 273 PVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHG 350 (451)
Q Consensus 273 ~~~~Gv~l~~~~~~~~~~~G~~l~l~s~l~~al~~v~~kk~~~--~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~ 350 (451)
.+.+|......+|.+++..|+.+++.+.++.+.+.++.||..+ +.+.+.+++|.++.+...+....++.++++-
T Consensus 139 ~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~---- 214 (314)
T KOG1444|consen 139 AMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDA---- 214 (314)
T ss_pred HHHHHHHhhccccceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHH----
Confidence 9999999999999999999999999999999999999998774 5788899999999999998888877766541
Q ss_pred hhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHh-CCcCchhhHHHHHHHHH
Q 013023 351 LSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAF-GNKISTQTGIGTVIAIA 429 (451)
Q Consensus 351 ~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~f-ge~ls~~~iiG~~lii~ 429 (451)
.....+.......+..+.++|++++..+++.+++.+..|+++.++.+ ++..+...++.+.+ |++.+..+++|..+.++
T Consensus 215 l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG-~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ 293 (314)
T KOG1444|consen 215 LSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVG-AKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFF 293 (314)
T ss_pred HHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehh-hhhhHHHHHHHHhcCCceechhhhHHHHHHhh
Confidence 11112223334567788999999999999999999999999999999 66666666655555 56799999999999999
Q ss_pred HHHHHHhhhhhHHH
Q 013023 430 GVAAYSYIKAQMEE 443 (451)
Q Consensus 430 Gv~ly~~~~~~~~~ 443 (451)
|..+|++.+.++|+
T Consensus 294 ggv~Y~~~~~~~k~ 307 (314)
T KOG1444|consen 294 GGVLYSYATFRKKK 307 (314)
T ss_pred hhhHHhhhhhhhcc
Confidence 99999998876544
No 7
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.93 E-value=1e-22 Score=208.37 Aligned_cols=277 Identities=12% Similarity=0.092 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-hCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 013023 119 FLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWA-VGL-PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAV 196 (451)
Q Consensus 119 ~~~~~~~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~sl~~v 196 (451)
.+..++.++.|..++.-=.|+.+.++|++++.+.+.+... .++ ++.++.+++.+..+...|++......+.+.+++|+
T Consensus 23 ~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~t 102 (358)
T PLN00411 23 TSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYS 102 (358)
T ss_pred HHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3445566777888876334888999999999877654432 222 22233346667778888887755666899999999
Q ss_pred hHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHH------hCcccChhHHHH
Q 013023 197 AVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFI------LGQQLPLTLWLS 270 (451)
Q Consensus 197 svs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~------l~ek~~~~~~ls 270 (451)
+.+.+.++. ++.|+|++++++++ ++||++++++++
T Consensus 103 sa~~asll~---------------------------------------~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G 143 (358)
T PLN00411 103 NPTLASAIS---------------------------------------NITPALTFILAIIFRMEKVSFKERSSVAKVMG 143 (358)
T ss_pred cHHHHHHHH---------------------------------------HhhHHHHHHHHHHHHhchhhhcccccHHHHHH
Confidence 999999998 99999999999999 699999999999
Q ss_pred HHHHHHHhhhhccc-cc-----------------------ccc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCChH-HHHH
Q 013023 271 LAPVVIGVSMASLT-EL-----------------------SFN-WTGFISAMISNISFTYRSIYSKKAMTDMDST-NIYA 324 (451)
Q Consensus 271 l~~~~~Gv~l~~~~-~~-----------------------~~~-~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~-~l~~ 324 (451)
++++++|+.++... +. ..+ ..|..++++++++|+++++++|+..+++++. ...+
T Consensus 144 ~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~ 223 (358)
T PLN00411 144 TILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSF 223 (358)
T ss_pred HHHHHHHHHHHHHccCcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHH
Confidence 99999999987531 10 112 4599999999999999999999998877554 5666
Q ss_pred HHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHH
Q 013023 325 YISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFV 404 (451)
Q Consensus 325 ~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~ 404 (451)
+++.++.+.+.+++...|..+... |. ...+. .. ..+++.+++..+.....++.+++.+|...++..++.|+++
T Consensus 224 ~~~~~~~~~~~~~~l~~~~~~~~~--~~---~~~~~-~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a 296 (358)
T PLN00411 224 LYTVCVSIVTSMIGLVVEKNNPSV--WI---IHFDI-TL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIA 296 (358)
T ss_pred HHHHHHHHHHHHHHHHHccCCccc--ce---eccch-HH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHH
Confidence 777777777766666655432111 10 00111 11 1233344433333334457789999999999999999999
Q ss_pred HHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhhhhH
Q 013023 405 IGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQM 441 (451)
Q Consensus 405 i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~~~~ 441 (451)
.++|++++||+++..+++|.+++++|+++.++.++++
T Consensus 297 ~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~ 333 (358)
T PLN00411 297 VVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANE 333 (358)
T ss_pred HHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999999999999999988655443
No 8
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.91 E-value=2.5e-21 Score=193.25 Aligned_cols=266 Identities=12% Similarity=0.077 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013023 109 VTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVT 188 (451)
Q Consensus 109 ~~~~~~~~w~~~~~~~~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 188 (451)
.....+++|- ......|..++++| |..+.++|+.++.+++.+.. +.++.+ ++.++..+..++...+.+.+
T Consensus 8 ~~l~a~~~Wg----~~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~~~~~---~~~~~~~~~~~l~~~~~~~~ 77 (295)
T PRK11689 8 IGLIAILLWS----TMVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GFPRLR---QFPKRYLLAGGLLFVSYEIC 77 (295)
T ss_pred HHHHHHHHHH----HHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--cccccc---cccHHHHHHHhHHHHHHHHH
Confidence 3444555552 23466799999998 99999999999977665432 222211 22223334444444455566
Q ss_pred HHHhhhch----hHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccC
Q 013023 189 SNVSFAAV----AVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLP 264 (451)
Q Consensus 189 ~~~sl~~v----svs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~ 264 (451)
.+.++++. +.....++. ++.|+++.+++++++|||++
T Consensus 78 ~~~a~~~~~~~~~a~~a~~l~---------------------------------------~~~Pi~~~ll~~~~~~e~~~ 118 (295)
T PRK11689 78 LALSLGYANTRRQAIEVGMVN---------------------------------------YLWPSLTILFAVLFNGQKAN 118 (295)
T ss_pred HHHHHHHhhccccchHHHHHH---------------------------------------HHhHHHHHHHHHHHhcCCcc
Confidence 66666543 333334444 89999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhhccccc-----------cccHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHH
Q 013023 265 LTLWLSLAPVVIGVSMASLTEL-----------SFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFV 333 (451)
Q Consensus 265 ~~~~lsl~~~~~Gv~l~~~~~~-----------~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~ 333 (451)
++++.++++.++|+.++..++. +.+..|++++++++++|+.++++.||..++.++..... ..+.+.
T Consensus 119 ~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~ 195 (295)
T PRK11689 119 WLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALA 195 (295)
T ss_pred HHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHH
Confidence 9999999999999998875432 12356999999999999999999999988888776432 223333
Q ss_pred HHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 013023 334 CIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFG 413 (451)
Q Consensus 334 llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fg 413 (451)
+.+.....+.+.. .+ .. ..+..+++.|+...+...+.++.+++.+|...++..+++|+++++++++++|
T Consensus 196 l~~~~~~~~~~~~---~~-------~~-~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lg 264 (295)
T PRK11689 196 LWIKYFLSPQPAM---VF-------SL-PAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLS 264 (295)
T ss_pred HHHHHHHhcCccc---cC-------CH-HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhC
Confidence 3333333222111 01 11 1233334444444334444567789999999999999999999999999999
Q ss_pred CcCchhhHHHHHHHHHHHHHHHhh
Q 013023 414 NKISTQTGIGTVIAIAGVAAYSYI 437 (451)
Q Consensus 414 e~ls~~~iiG~~lii~Gv~ly~~~ 437 (451)
|+++..+++|.++++.|+.+....
T Consensus 265 E~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 265 TPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred CCCcHHHHHHHHHHHHhHHHHhhh
Confidence 999999999999999999877543
No 9
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.91 E-value=8.7e-21 Score=188.96 Aligned_cols=262 Identities=15% Similarity=0.108 Sum_probs=198.9
Q ss_pred HHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhh-hchhHhH
Q 013023 123 IFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSF-AAVAVSF 200 (451)
Q Consensus 123 ~~~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~sl-~~vsvs~ 200 (451)
...+..|..+++.+ |..++++|++++.+++++....+..+ ..++++++.....|.+. .....+.+.+. ++++++.
T Consensus 22 ~~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~ 98 (292)
T PRK11272 22 STYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGI 98 (292)
T ss_pred hHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH
Confidence 34466798888887 99999999999987765544332222 22456677777777764 35566777887 8888888
Q ss_pred HHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhh
Q 013023 201 THTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 280 (451)
Q Consensus 201 ~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l 280 (451)
..++. ++.|+++++++.+ +|||++++++.++++.++|+.+
T Consensus 99 a~~l~---------------------------------------~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~l 138 (292)
T PRK11272 99 AAVVV---------------------------------------ATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVL 138 (292)
T ss_pred HHHHH---------------------------------------HHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHH
Confidence 87777 8999999999985 6999999999999999999998
Q ss_pred hccc-cccccHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhc
Q 013023 281 ASLT-ELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG 359 (451)
Q Consensus 281 ~~~~-~~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~ 359 (451)
+..+ +.+.+..|.+++++++++|+++.+..||..++ ++.....++...+...+.++....+.+.... .
T Consensus 139 l~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 207 (292)
T PRK11272 139 LNSGGNLSGNPWGAILILIASASWAFGSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTAL----------P 207 (292)
T ss_pred HhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCccccc----------C
Confidence 8644 33456789999999999999999999997644 4456667888888888877765443321100 0
Q ss_pred hHHHHHHHHHHHHHHHHHHH-HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhh
Q 013023 360 MVKFISDLFWVGMFYHLYNQ-LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 438 (451)
Q Consensus 360 ~~~~~~~l~~~gi~~~~~~~-~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~ 438 (451)
....+..+++.+++.....+ ..+..+++.++.+.++...++|+++++++++++||+++..+++|.++++.|+++.+..+
T Consensus 208 ~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 208 TLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 11223444444554433333 33567899999999999999999999999999999999999999999999998876543
No 10
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=1.3e-24 Score=207.67 Aligned_cols=292 Identities=18% Similarity=0.296 Sum_probs=249.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcc----CCcHHHHHHHHHHHHHHHHHHHHH--------hCCCCCCCCCHHHHHHHHH
Q 013023 110 TGFFFFMWYFLNVIFNILNKRIYNY----FPYPYFVSVIHLLVGVVYCLVSWA--------VGLPKRAPIDSKLLKLLIP 177 (451)
Q Consensus 110 ~~~~~~~w~~~~~~~~i~nK~ll~~----f~~P~~lt~~~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 177 (451)
.......++.+++.+.++||++++. .+.|.++++.|.++...+|...-. +..|+.+ ++.+..+++.|
T Consensus 29 v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~-ldl~t~r~vlp 107 (347)
T KOG1442|consen 29 VDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQ-LDLATARQVLP 107 (347)
T ss_pred hhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCccc-ccHHHHHhhcc
Confidence 3344556777889999999999984 678999999999999888765432 1223333 66677899999
Q ss_pred HHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHH
Q 013023 178 VAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQF 257 (451)
Q Consensus 178 ~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~ 257 (451)
+++.+.+++.++|++++|++|+||++-+ ++.-+|+.+++|.
T Consensus 108 lsvVfi~mI~fnnlcL~yVgVaFYyvgR---------------------------------------sLttvFtVlLtyv 148 (347)
T KOG1442|consen 108 LSVVFILMISFNNLCLKYVGVAFYYVGR---------------------------------------SLTTVFTVLLTYV 148 (347)
T ss_pred hhheeeeehhccceehhhcceEEEEecc---------------------------------------chhhhHHHHhHHh
Confidence 9999999999999999999999999999 8899999999999
Q ss_pred HhCcccChhHHHHHHHHHHHhhhhcccc---ccccHHHHHHHHHHHHHHHHHHHHHHhhcCCC--ChHHHHHHHHHHHHH
Q 013023 258 ILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISNISFTYRSIYSKKAMTDM--DSTNIYAYISIIALF 332 (451)
Q Consensus 258 ~l~ek~~~~~~lsl~~~~~Gv~l~~~~~---~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~--~~~~l~~~~~~~s~l 332 (451)
++|||-+..-..+..+++.|..+-+.+| ...+|.|.++.+.++++.++..++.||...+. .-+.+.+|++..+.+
T Consensus 149 llkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~l 228 (347)
T KOG1442|consen 149 LLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALL 228 (347)
T ss_pred hcccccccccceeehhheehheeccccccccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHH
Confidence 9999999999999999999999888777 56789999999999999999999999887654 467899999999999
Q ss_pred HHHHHHHHhhchh-hhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHH
Q 013023 333 VCIPPAIIVEGPQ-LIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILA 411 (451)
Q Consensus 333 ~llp~al~~e~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~ 411 (451)
+.+|...+...-+ ... +++....++|..+.++|++++.+|+...+.++.+||+||.+.++.|.....++++.+
T Consensus 229 Lflpll~lnge~~~v~~------~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~ 302 (347)
T KOG1442|consen 229 LFLPLLILNGEFQAVVG------FPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAY 302 (347)
T ss_pred HHHHHHHHcchHHHHcC------cccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHH
Confidence 9999887753322 111 123334578899999999999999999999999999999999999999999999999
Q ss_pred hCCcCchhhHHHHHHHHHHHHHHHhhhhhHHHHHHh
Q 013023 412 FGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEKRQ 447 (451)
Q Consensus 412 fge~ls~~~iiG~~lii~Gv~ly~~~~~~~~~~~~~ 447 (451)
++|..+..-|.|-.+++.|...|++.|..+.+++.+
T Consensus 303 y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~ 338 (347)
T KOG1442|consen 303 YSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASA 338 (347)
T ss_pred HHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999998876555443
No 11
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.90 E-value=8.9e-21 Score=184.41 Aligned_cols=250 Identities=16% Similarity=0.165 Sum_probs=196.4
Q ss_pred HHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH-HHHHHHHHHHHhhhchhHhHHHH
Q 013023 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAV-CHALGHVTSNVSFAAVAVSFTHT 203 (451)
Q Consensus 125 ~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~sl~~vsvs~~~~ 203 (451)
.+..|+.+++...|..+...|++++.+++.+....+ .++++++.....+. ...+...+...++++++++...+
T Consensus 5 ~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~i 78 (260)
T TIGR00950 5 GVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAAL 78 (260)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHH
Confidence 355788887655589999999999987766554322 13444445555554 56678889999999999999988
Q ss_pred hhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhcc
Q 013023 204 IKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 283 (451)
Q Consensus 204 ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~ 283 (451)
+. ++.|+++++++.+++|||++++++.+++++++|+.++..
T Consensus 79 i~---------------------------------------~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~ 119 (260)
T TIGR00950 79 LL---------------------------------------YLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLS 119 (260)
T ss_pred HH---------------------------------------hhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhcc
Confidence 88 899999999999999999999999999999999998865
Q ss_pred cc-ccccHHHHHHHHHHHHHHHHHHHHHHhhcCCCChH--HHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhch
Q 013023 284 TE-LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDST--NIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGM 360 (451)
Q Consensus 284 ~~-~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~--~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~ 360 (451)
.+ .+.+..|++++++++++|+.+.++.||..++.++. ..+.+.+.++.+++.|.....+.+... .
T Consensus 120 ~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----------~- 187 (260)
T TIGR00950 120 DGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQA-----------L- 187 (260)
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----------c-
Confidence 43 44567899999999999999999999998777744 455567888888888887654322110 0
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHH
Q 013023 361 VKFISDLFWVGMFYHLYN-QLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGV 431 (451)
Q Consensus 361 ~~~~~~l~~~gi~~~~~~-~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv 431 (451)
...+..++..|++..... ...++.+++.++.+.++...++|+++++++++++||+++..+++|.++++.|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 188 SLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 122334455555544333 34467789999999999999999999999999999999999999999999986
No 12
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.89 E-value=2e-20 Score=186.52 Aligned_cols=253 Identities=13% Similarity=0.093 Sum_probs=191.6
Q ss_pred HHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHHhh
Q 013023 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK 205 (451)
Q Consensus 126 i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik 205 (451)
...|..++++| |..+.++|++++.+++.+....+. .+.++++++..+..|++......+..+++++++.+.+.++.
T Consensus 29 ~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~ 104 (293)
T PRK10532 29 SLAKSLFPLVG-APGVTALRLALGTLILIAIFKPWR---LRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALE 104 (293)
T ss_pred HHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHHh---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 35799999888 999999999999877665442211 22356677778888888777788889999999999988887
Q ss_pred hchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhccc-
Q 013023 206 GEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT- 284 (451)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~- 284 (451)
.+.|+++++++ +|++.+ +..+++.++|+.++...
T Consensus 105 ---------------------------------------~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~ 139 (293)
T PRK10532 105 ---------------------------------------FTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLG 139 (293)
T ss_pred ---------------------------------------HHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecC
Confidence 78999998876 355544 44567778999876532
Q ss_pred -c-ccccHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHH
Q 013023 285 -E-LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVK 362 (451)
Q Consensus 285 -~-~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~ 362 (451)
+ .+.+..|.+++++++++|+.+.++.||..++.++... .++..++++++.|+....+.... + + ..
T Consensus 140 ~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~----~-------~-~~ 206 (293)
T PRK10532 140 QDVSHVDLTGAALALGAGACWAIYILSGQRAGAEHGPATV-AIGSLIAALIFVPIGALQAGEAL----W-------H-WS 206 (293)
T ss_pred CCcccCChHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHHHHHHHccCccc----C-------C-HH
Confidence 2 2345789999999999999999999999888887765 46667777777777665332110 0 0 11
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhhhh
Q 013023 363 FISDLFWVGMFYHLYNQLA-TNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 440 (451)
Q Consensus 363 ~~~~l~~~gi~~~~~~~~~-~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~~~ 440 (451)
.+..+++.|++.....+.. ++.+++.++.+.++..+++|+++.+++++++||+++..+++|.+++++|++.+....++
T Consensus 207 ~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 207 ILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 2233345555554444433 57789999999999999999999999999999999999999999999999998766543
No 13
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.89 E-value=6.3e-20 Score=183.39 Aligned_cols=262 Identities=16% Similarity=0.250 Sum_probs=186.9
Q ss_pred HHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHhhhc-hhHhHHH
Q 013023 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAA-VAVSFTH 202 (451)
Q Consensus 125 ~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~sl~~-vsvs~~~ 202 (451)
....|..+++++ |..+.++|+.++.+.+.+... .++ .+ ++..+..+++.. ....+...++++ .+.+...
T Consensus 20 ~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~--~~~---~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~ 90 (299)
T PRK11453 20 FVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA--RPK---VP---LNLLLGYGLTISFGQFAFLFCAINFGMPAGLAS 90 (299)
T ss_pred HHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc--CCC---Cc---hHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 355688888888 999999999987655443321 222 12 223444455433 333455667776 5777777
Q ss_pred HhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhc
Q 013023 203 TIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 282 (451)
Q Consensus 203 ~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~ 282 (451)
++. ++.|+++.+++++++|||+++++++++++.++|+.++.
T Consensus 91 ~l~---------------------------------------~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~ 131 (299)
T PRK11453 91 LVL---------------------------------------QAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLI 131 (299)
T ss_pred HHH---------------------------------------HhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence 776 89999999999999999999999999999999999887
Q ss_pred ccc---ccccHHHHHHHHHHHHHHHHHHHHHHhhcCCCChH---HHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhh
Q 013023 283 LTE---LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDST---NIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAIS 356 (451)
Q Consensus 283 ~~~---~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~---~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~ 356 (451)
..+ .+.++.|++++++++++|+.+.++.||..++.++. ....++...+.+.+.+.+...|++......+ .
T Consensus 132 ~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 207 (299)
T PRK11453 132 EDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL----V 207 (299)
T ss_pred cccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh----c
Confidence 532 23346799999999999999999999986554333 3444555554444444444444432110000 0
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHH-HHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHH
Q 013023 357 KVGMVKFISDLFWVGMFYHLYNQLA-TNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 435 (451)
Q Consensus 357 ~~~~~~~~~~l~~~gi~~~~~~~~~-~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~ 435 (451)
..+ ...+..+++.|++.....+.. ++.+++.++.+.++...++|+++.+++++++||+++..+++|.+++++|+++..
T Consensus 208 ~~~-~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 208 TID-MTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINV 286 (299)
T ss_pred cCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHh
Confidence 111 233556666666666555544 467899999999999999999999999999999999999999999999998876
Q ss_pred hhhh
Q 013023 436 YIKA 439 (451)
Q Consensus 436 ~~~~ 439 (451)
+.++
T Consensus 287 ~~~~ 290 (299)
T PRK11453 287 FGLR 290 (299)
T ss_pred cchh
Confidence 5544
No 14
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.87 E-value=2.4e-20 Score=181.27 Aligned_cols=287 Identities=15% Similarity=0.148 Sum_probs=237.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHcc--------CCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013023 106 PALVTGFFFFMWYFLNVIFNILNKRIYNY--------FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIP 177 (451)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~i~nK~ll~~--------f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (451)
..++..+++.+.|..-..+.++++++.+. |..|.++.+.|-+++.+....+.. ..+.+....+.+..+..
T Consensus 11 ~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~--~~k~~~~~~apl~~y~~ 88 (327)
T KOG1581|consen 11 KIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLK--WWKKELSGVAPLYKYSL 88 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHh--cccccCCCCCchhHHhH
Confidence 35567777788888889999999998762 778999999999999876644332 22222334566778888
Q ss_pred HHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHH
Q 013023 178 VAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQF 257 (451)
Q Consensus 178 ~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~ 257 (451)
.++....+-.+...+++|++.+...+.| ++--+-+++.+.+
T Consensus 89 is~tn~~s~~~~yeaLKyvSyPtq~LaK---------------------------------------scKmIPVmlmg~L 129 (327)
T KOG1581|consen 89 ISFTNTLSSWCGYEALKYVSYPTQTLAK---------------------------------------SCKMIPVMLMGTL 129 (327)
T ss_pred HHHHhhcchHHHHHHHHhccchHHHHHH---------------------------------------HhhhhHHHHHHHH
Confidence 8998888999999999999999999999 4444445999999
Q ss_pred HhCcccChhHHHHHHHHHHHhhhhcccc---------ccccHHHHHHHHHHHHHHHHHHHHHHhhcC--CCChHHHHHHH
Q 013023 258 ILGQQLPLTLWLSLAPVVIGVSMASLTE---------LSFNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYI 326 (451)
Q Consensus 258 ~l~ek~~~~~~lsl~~~~~Gv~l~~~~~---------~~~~~~G~~l~l~s~l~~al~~v~~kk~~~--~~~~~~l~~~~ 326 (451)
+.++|++..+++..+++.+||.+....+ ..++.+|+.++..+.+.+++.+..++++.+ ++++++++++.
T Consensus 130 vy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~v 209 (327)
T KOG1581|consen 130 VYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGV 209 (327)
T ss_pred HhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHH
Confidence 9999999999999999999999886432 124689999999999999999999999986 47999999999
Q ss_pred HHHHHHHHHHHHHHhhchhhhhcchhhhhh-hhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHH
Q 013023 327 SIIALFVCIPPAIIVEGPQLIKHGLSDAIS-KVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVI 405 (451)
Q Consensus 327 ~~~s~l~llp~al~~e~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i 405 (451)
++++++......+ ..+. + .+.++ ....++.+.+++..+.++.+.+.+.|.++++.+|++..+.++.+.++++
T Consensus 210 NLf~~i~~~~~li-~qg~-~-----~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si 282 (327)
T KOG1581|consen 210 NLFSAILNGTYLI-LQGH-L-----LPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSI 282 (327)
T ss_pred HHHHHHHHHHhhh-cCCC-C-----chHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHH
Confidence 9999998876633 2221 1 11111 1234577889999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhhhh
Q 013023 406 GFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 440 (451)
Q Consensus 406 ~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~~~ 440 (451)
++|.+.||++++..|++|..+++.|+.+-.+.|.+
T Consensus 283 ~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 283 MLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 99999999999999999999999999998887776
No 15
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.87 E-value=5.3e-20 Score=185.77 Aligned_cols=273 Identities=12% Similarity=0.128 Sum_probs=211.5
Q ss_pred HHHHHHHHHHcc-CCcHHHHHHHHHHHHHHHHHHHHHhCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhchhHh
Q 013023 123 IFNILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGL--PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 199 (451)
Q Consensus 123 ~~~i~nK~ll~~-f~~P~~lt~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs 199 (451)
+.+..+..+-++ ++.|.+-+++..+.-.+........+. ++.....++.+++++..+++-..++.+.+.|++|++++
T Consensus 27 ~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvt 106 (334)
T PF06027_consen 27 GTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVT 106 (334)
T ss_pred hHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHh
Confidence 334445555443 667888887777665443322222222 12222234556677888999999999999999999999
Q ss_pred HHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhh
Q 013023 200 FTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVS 279 (451)
Q Consensus 200 ~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~ 279 (451)
..+++. ...-+|+++++++++++|+++.++++++++++|++
T Consensus 107 S~~lL~---------------------------------------~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~ 147 (334)
T PF06027_consen 107 SVQLLD---------------------------------------CTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVV 147 (334)
T ss_pred HHHhhh---------------------------------------hhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhh
Confidence 999999 67778899999999999999999999999999999
Q ss_pred hhccccc---------cccHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcc
Q 013023 280 MASLTEL---------SFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHG 350 (451)
Q Consensus 280 l~~~~~~---------~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~ 350 (451)
++...|. +....|+++++.+++.|++++++.++..++.+.........+++.++..+...+.|..++.+..
T Consensus 148 lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~ 227 (334)
T PF06027_consen 148 LVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIH 227 (334)
T ss_pred heeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccC
Confidence 8866541 2348999999999999999999999999999999999999999999998888888876654332
Q ss_pred hhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHH
Q 013023 351 LSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAG 430 (451)
Q Consensus 351 ~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~G 430 (451)
|. . ..+..++..+++-+......-..++..+|+..++......+.++++++++||+++++..++|.++++.|
T Consensus 228 w~-------~-~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG 299 (334)
T PF06027_consen 228 WT-------S-QVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIG 299 (334)
T ss_pred CC-------h-hhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHH
Confidence 22 1 223333334444444444444568999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHH
Q 013023 431 VAAYSYIKAQME 442 (451)
Q Consensus 431 v~ly~~~~~~~~ 442 (451)
+++|+....+.+
T Consensus 300 ~vvy~~~~~~~~ 311 (334)
T PF06027_consen 300 FVVYNLAESPEE 311 (334)
T ss_pred hheEEccCCccc
Confidence 999988665543
No 16
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.87 E-value=5.4e-19 Score=176.51 Aligned_cols=258 Identities=14% Similarity=0.089 Sum_probs=179.2
Q ss_pred HHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCC---C-CCHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHH
Q 013023 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRA---P-IDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT 201 (451)
Q Consensus 126 i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~ 201 (451)
+..|.. .+.+ |..+.++|++++.+++.+....+.+++. . .+++.+......++..+....+.++++++++++..
T Consensus 25 ~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a 102 (296)
T PRK15430 25 AYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEA 102 (296)
T ss_pred HHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH
Confidence 445765 5677 9999999999997755544332211100 0 12233333334445566788999999999999999
Q ss_pred HHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhhh
Q 013023 202 HTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 281 (451)
Q Consensus 202 ~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~ 281 (451)
.++. ++.|+++++++++++|||+++++|.+++++++|+.++
T Consensus 103 ~~l~---------------------------------------~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li 143 (296)
T PRK15430 103 SLGY---------------------------------------FINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQ 143 (296)
T ss_pred HHHH---------------------------------------HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 9998 8999999999999999999999999999999999988
Q ss_pred ccccccccHHHHHHHHHHHHHHHHHHHHHHhhcCCC--ChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhc
Q 013023 282 SLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDM--DSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG 359 (451)
Q Consensus 282 ~~~~~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~--~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~ 359 (451)
...+.+.. .+.++++++|++|.++.||...+. +......|+.+.+.+..+++. +.+.. . + ....
T Consensus 144 ~~~~~~~~----~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~--~----~~~~ 209 (296)
T PRK15430 144 LWTFGSLP----IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTS-H--M----GQNP 209 (296)
T ss_pred HHHcCCcc----HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcc-c--c----cCCc
Confidence 64332222 457788999999999999875432 223334445545444332221 11100 0 0 0001
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhhh
Q 013023 360 MVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 439 (451)
Q Consensus 360 ~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~~ 439 (451)
. ..+..++..|+.......+.+..+++.+|.+.+...+++|+++++++++++||+++..+++|+++++.|+.+......
T Consensus 210 ~-~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~ 288 (296)
T PRK15430 210 M-SLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAI 288 (296)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 112233334444444445556778999999999999999999999999999999999999999999999887765443
No 17
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.83 E-value=4.7e-20 Score=173.16 Aligned_cols=269 Identities=16% Similarity=0.169 Sum_probs=221.1
Q ss_pred HHHHHHHHHHc-----------cCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 013023 123 IFNILNKRIYN-----------YFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNV 191 (451)
Q Consensus 123 ~~~i~nK~ll~-----------~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 191 (451)
.+.+.++++.. .|.|...+.++|..+..++.-+... .++....|...-+.+..+++-+.+.++.+|.
T Consensus 27 ~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~--ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~ 104 (337)
T KOG1580|consen 27 VYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFL--IRKKTEIDNTPTKMYAACSASYLLAMVSSNQ 104 (337)
T ss_pred hhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhhee--ecccccccCCcchHHHHHHHHHHHHHHhccc
Confidence 34466666654 2778888999998888887654443 2333455666677889999999999999999
Q ss_pred hhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHH
Q 013023 192 SFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSL 271 (451)
Q Consensus 192 sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl 271 (451)
+++|++-+....-| ++-|+-+++++.++.+++++|+++..+
T Consensus 105 Alq~vpYPTqVlgK---------------------------------------ScKPIPVMilGVl~~~KsY~w~kY~cV 145 (337)
T KOG1580|consen 105 ALQYVPYPTQVLGK---------------------------------------SCKPIPVMILGVLFAHKSYHWRKYCCV 145 (337)
T ss_pred hhcccCCcHHHhcc---------------------------------------cCCCcceeeeehhhhcccccHHHHHHH
Confidence 99999999999999 899999999999999999999999999
Q ss_pred HHHHHHhhhhcccc-------ccccHHHHHHHHHHHHHHHHHHHHHHhhcCC--CChHHHHHHHHHHHHHHHHHHHHHh-
Q 013023 272 APVVIGVSMASLTE-------LSFNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIV- 341 (451)
Q Consensus 272 ~~~~~Gv~l~~~~~-------~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~--~~~~~l~~~~~~~s~l~llp~al~~- 341 (451)
+++++||++.-+++ ......|-++.++|....++....++|.-.. -+...++.|+++.+.+.+-.-.++.
T Consensus 146 L~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTG 225 (337)
T KOG1580|consen 146 LMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTG 225 (337)
T ss_pred HHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehh
Confidence 99999999997764 2233578899999999999999999887643 4677899999999998876554443
Q ss_pred hchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhH
Q 013023 342 EGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTG 421 (451)
Q Consensus 342 e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~i 421 (451)
|.|+++.. ....+..+..+...+++..+.+.+.|..+...+|++.|+.++.++.++++.|+++|+++++..||
T Consensus 226 ElweF~yF-------~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQw 298 (337)
T KOG1580|consen 226 ELWEFFYF-------VQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQW 298 (337)
T ss_pred hHHHHHHH-------HHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHH
Confidence 44444321 23445667888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh
Q 013023 422 IGTVIAIAGVAAYSYIKA 439 (451)
Q Consensus 422 iG~~lii~Gv~ly~~~~~ 439 (451)
+|.++++.|...-....+
T Consensus 299 lgtvlVF~aL~~D~~~GK 316 (337)
T KOG1580|consen 299 LGTVLVFSALTADVVDGK 316 (337)
T ss_pred HHHHHHHHHhhhHhhcCC
Confidence 999999999887554433
No 18
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.80 E-value=1.9e-18 Score=161.25 Aligned_cols=277 Identities=16% Similarity=0.191 Sum_probs=233.5
Q ss_pred HHHHHHHHHHHHHHHHHcc--CCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013023 116 MWYFLNVIFNILNKRIYNY--FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSF 193 (451)
Q Consensus 116 ~w~~~~~~~~i~nK~ll~~--f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~sl 193 (451)
.|.+.++..++.||++++. |+--+.+.+.|.+++.+-+.+..+.+..+.+ ....|.++|.+++....++.+.-++
T Consensus 13 sYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR---~t~aK~WfpiSfLLv~MIyt~SKsL 89 (309)
T COG5070 13 SYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR---LTKAKKWFPISFLLVVMIYTSSKSL 89 (309)
T ss_pred HHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee---hhhhhhhcCHHHHHHHHHHhcccce
Confidence 3444778889999999885 7767888899999998776666655554433 3456788999999999999999999
Q ss_pred hchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHH
Q 013023 194 AAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAP 273 (451)
Q Consensus 194 ~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~ 273 (451)
+|.+++.|++.| .+..+.++.....++|.|.+-....+.++
T Consensus 90 qyL~vpiYTiFK---------------------------------------NltII~iAygEvl~Fgg~vtsl~l~SFil 130 (309)
T COG5070 90 QYLAVPIYTIFK---------------------------------------NLTIILIAYGEVLFFGGRVTSLELLSFIL 130 (309)
T ss_pred eeeeeeHHHHhc---------------------------------------cceeehhHhhHHHHhcCccchhhHHHHHH
Confidence 999999999999 88888899999999999999999999999
Q ss_pred HHHHhhhhccccc--------cccHHHHHHHHHHHHHHHHHHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 013023 274 VVIGVSMASLTEL--------SFNWTGFISAMISNISFTYRSIYSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVEG 343 (451)
Q Consensus 274 ~~~Gv~l~~~~~~--------~~~~~G~~l~l~s~l~~al~~v~~kk~~--~~~~~~~l~~~~~~~s~l~llp~al~~e~ 343 (451)
++..-..+.++|. ..| .|.++...+.++.+.+-..+||.. ++....+.++|.+..+..+++.+.+++|.
T Consensus 131 MvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~ed 209 (309)
T COG5070 131 MVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFED 209 (309)
T ss_pred HHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhcc
Confidence 9999999998885 233 588999999999999988888765 45667789999999999999999999987
Q ss_pred hhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHH
Q 013023 344 PQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIG 423 (451)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG 423 (451)
|..-. ....+ ....+..++++|++.+...++.-++++.+|+.++|+.+.+.+....+.+.++||++.+...+..
T Consensus 210 ws~~n--~annl----~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~s 283 (309)
T COG5070 210 WSPGN--LANNL----SVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFS 283 (309)
T ss_pred CCcch--hhcCC----ChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHH
Confidence 65321 11111 1234567889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhH
Q 013023 424 TVIAIAGVAAYSYIKAQM 441 (451)
Q Consensus 424 ~~lii~Gv~ly~~~~~~~ 441 (451)
..+-+....+|.+.|.++
T Consensus 284 illGflsg~iYavaks~k 301 (309)
T COG5070 284 ILLGFLSGAIYAVAKSKK 301 (309)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999989999877654
No 19
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.80 E-value=2.9e-17 Score=162.69 Aligned_cols=259 Identities=15% Similarity=0.177 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhchhHh
Q 013023 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVG--LPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 199 (451)
Q Consensus 122 ~~~~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs 199 (451)
...+...|+..++-+ +. ...+..+..+.+.+....+ .++.++.+++.+...+..++.......+.+.++++.+++
T Consensus 14 a~~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 90 (281)
T TIGR03340 14 AGWNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVG 90 (281)
T ss_pred HHHHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChh
Confidence 455677787766532 32 3444445544444333221 222233344455555666666778888999999999999
Q ss_pred HHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhh
Q 013023 200 FTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVS 279 (451)
Q Consensus 200 ~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~ 279 (451)
....+. ++.|+++++++++++|||+++++|++++++++|+.
T Consensus 91 ~~~~l~---------------------------------------~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ 131 (281)
T TIGR03340 91 LVYPLA---------------------------------------RSSPLLVAIWATLTLGETLSPLAWLGILIITLGLL 131 (281)
T ss_pred hhhhHH---------------------------------------hhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 998888 88999999999999999999999999999999999
Q ss_pred hhccccc-cccHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHH-HHHHHHHHHHHHH-HHHHHHh---hchhhhhcchhh
Q 013023 280 MASLTEL-SFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTN-IYAYISIIALFVC-IPPAIIV---EGPQLIKHGLSD 353 (451)
Q Consensus 280 l~~~~~~-~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~-l~~~~~~~s~l~l-lp~al~~---e~~~~~~~~~~~ 353 (451)
++..++. +.+..|+.++++++++|+.+.+..|+..++.++.. ...+. ..+.+.. .|+.... +......
T Consensus 132 ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----- 205 (281)
T TIGR03340 132 VLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYL-GIGFLAMGWPFLLLYLKRHGRSMFP----- 205 (281)
T ss_pred HHhcccccccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHH-HHHHHHHHHHHHHHHHHHhccchhh-----
Confidence 8865432 34567888999999999999999988765554432 22222 1222221 2332221 1110000
Q ss_pred hhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHH
Q 013023 354 AISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAA 433 (451)
Q Consensus 354 ~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~l 433 (451)
. ....+..+...++.....+...+..+++.++...+....+.|+++.+++++++||+++..+++|.++++.|+.+
T Consensus 206 ----~-~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 206 ----Y-ARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred ----h-HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 0 01112223333333333344445778999999999999999999999999999999999999999999999875
No 20
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.77 E-value=2.3e-15 Score=147.07 Aligned_cols=260 Identities=18% Similarity=0.190 Sum_probs=185.4
Q ss_pred HHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHHh
Q 013023 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI 204 (451)
Q Consensus 125 ~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~i 204 (451)
....|...++...+......|.+.+.+........+.....+..++.++..+..++.......+...++++++++.++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 102 (292)
T COG0697 23 FIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLI 102 (292)
T ss_pred HHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Confidence 34445555553335666666888887663333322211112212223344555556666788899999999999999999
Q ss_pred hhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHH-HHhCcccChhHHHHHHHHHHHhhhhcc
Q 013023 205 KGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQ-FILGQQLPLTLWLSLAPVVIGVSMASL 283 (451)
Q Consensus 205 k~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~-~~l~ek~~~~~~lsl~~~~~Gv~l~~~ 283 (451)
. ++.|+++.+++. ++++||++++++.+++..+.|+.++..
T Consensus 103 ~---------------------------------------~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~ 143 (292)
T COG0697 103 I---------------------------------------GLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILL 143 (292)
T ss_pred H---------------------------------------HHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheec
Confidence 9 899999999996 777999999999999999999999988
Q ss_pred cccccc---HHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHH-HHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhc
Q 013023 284 TELSFN---WTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYA-YISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG 359 (451)
Q Consensus 284 ~~~~~~---~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~-~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~ 359 (451)
.+...+ ..|..+++.++++++++.+..|+.. +.++..... ++.........+... +... .. .
T Consensus 144 ~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~----------~ 209 (292)
T COG0697 144 GGGGGGILSLLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFL--SGFG-AP----------I 209 (292)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHh--cccc-cc----------C
Confidence 765443 5899999999999999999999987 666666665 444322222222211 1111 00 0
Q ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhh
Q 013023 360 MVKFISDLFWVGMFYHL-YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 437 (451)
Q Consensus 360 ~~~~~~~l~~~gi~~~~-~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~ 437 (451)
....+..+...|++... .....+..+++.++...+....++|+++++++++++||+++..+++|.++++.|+.+....
T Consensus 210 ~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 210 LSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 11223444455555443 3444467789999999999999999999999999999999999999999999999988765
No 21
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.73 E-value=1e-16 Score=143.76 Aligned_cols=145 Identities=32% Similarity=0.465 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcC-------CCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhc-hHHH
Q 013023 292 GFISAMISNISFTYRSIYSKKAMT-------DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG-MVKF 363 (451)
Q Consensus 292 G~~l~l~s~l~~al~~v~~kk~~~-------~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~-~~~~ 363 (451)
|++++++++++.++++++.|+.++ +.++.++++|+++.+.++++|.+++.|+++..+......-.+.. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 788999999999999999998774 46899999999999999999999999988754322111000111 3456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHh
Q 013023 364 ISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 436 (451)
Q Consensus 364 ~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~ 436 (451)
+..++..|++++++|+..+.+++++||+++++.+.+|+++++++|+++|||++|..+++|.++++.|+++|+|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 7788899999999999999999999999999999999999999999999999999999999999999999975
No 22
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.70 E-value=1.1e-15 Score=146.42 Aligned_cols=290 Identities=16% Similarity=0.156 Sum_probs=230.2
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHcc--CC-cHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 013023 102 FDRYPALVTGFFFFMWYFLNVIFNILNKRIYNY--FP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPV 178 (451)
Q Consensus 102 ~~~~~~l~~~~~~~~w~~~~~~~~i~nK~ll~~--f~-~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (451)
.++.++.+..+.+...+++-....+.++.+++. |+ +.|.++..|+++-..+.++....-.++++. ..||.+..+
T Consensus 36 s~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~---iP~rtY~~l 112 (367)
T KOG1582|consen 36 SDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRV---IPWRTYVIL 112 (367)
T ss_pred ccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeeccccee---cchhHhhhh
Confidence 455567777777788877878888999999985 65 889999999998766554433221233333 346678888
Q ss_pred HHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHH
Q 013023 179 AVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFI 258 (451)
Q Consensus 179 ~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~ 258 (451)
+.+..+.+.++|-|+.|+.-+...+.| ++--+-+++.+.++
T Consensus 113 a~~t~gtmGLsn~SlgYLNYPtQviFK---------------------------------------ccKliPVmiggifI 153 (367)
T KOG1582|consen 113 AFLTVGTMGLSNGSLGYLNYPTQVIFK---------------------------------------CCKLIPVMIGGIFI 153 (367)
T ss_pred HhhhhhccccCcCccccccCcHHHHHH---------------------------------------hhhhhhhhheeeee
Confidence 888889999999999999999999998 44444448899999
Q ss_pred hCcccChhHHHHHHHHHHHhhhhcccc----ccccHHHHHHHHHHHHHHHHHHHHHHhhcCC--CChHHHHHHHHHHHHH
Q 013023 259 LGQQLPLTLWLSLAPVVIGVSMASLTE----LSFNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALF 332 (451)
Q Consensus 259 l~ek~~~~~~lsl~~~~~Gv~l~~~~~----~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~--~~~~~l~~~~~~~s~l 332 (451)
-++|+++..+.+..++.+|.++....| .+||..|+.+.-++.++.|+-.-.++|.++. -+..++.+|...++.+
T Consensus 154 qGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~v 233 (367)
T KOG1582|consen 154 QGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFV 233 (367)
T ss_pred ccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHH
Confidence 999999999999999999999997765 5789999999999999999999999998864 4566888999889988
Q ss_pred HHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHh
Q 013023 333 VCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAF 412 (451)
Q Consensus 333 ~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~f 412 (451)
+++.+.....+- + .+|. .+. ..........+..++.+++.......+++..++.+++..++.++.+++++|.++|
T Consensus 234 flf~~mvlTge~-f--~a~~-fca-ehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllF 308 (367)
T KOG1582|consen 234 FLFAPMVLTGEL-F--SAWT-FCA-EHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLF 308 (367)
T ss_pred HHHHHHHhcccc-h--hhhH-HHH-hCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHH
Confidence 887766654221 1 0111 111 2223356667777788888888878889999999999999999999999999999
Q ss_pred CCcCchhhHHHHHHHHHHHHHHHhhh
Q 013023 413 GNKISTQTGIGTVIAIAGVAAYSYIK 438 (451)
Q Consensus 413 ge~ls~~~iiG~~lii~Gv~ly~~~~ 438 (451)
..++|.+..-|..+++.|+++--+.|
T Consensus 309 sKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 309 SKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred cCchHHHHhhhhHHHHHHHHhhcccC
Confidence 99999999999999999999866655
No 23
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.69 E-value=4.8e-14 Score=137.57 Aligned_cols=231 Identities=10% Similarity=0.017 Sum_probs=153.2
Q ss_pred HHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HhCCCC-----CCCCCHH-HHHHHHHHHHHHHHHHHHHHHhhhchh
Q 013023 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPK-----RAPIDSK-LLKLLIPVAVCHALGHVTSNVSFAAVA 197 (451)
Q Consensus 125 ~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~-~~~~~~-----~~~~~~~-~~~~~~~~~l~~~~~~~~~~~sl~~vs 197 (451)
.+..|. ..+.+ |..+.++|++++.+.+.+.. ..+.++ .++.+++ .+......+++......+...++++++
T Consensus 18 ~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~ 95 (256)
T TIGR00688 18 YYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGS 95 (256)
T ss_pred HHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence 345677 45577 99999999999977654433 222211 0111122 233456667777788899999999999
Q ss_pred HhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHH
Q 013023 198 VSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 277 (451)
Q Consensus 198 vs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~G 277 (451)
++.+.++. ++.|+|+++++.+++|||++++++++++++++|
T Consensus 96 ~~~a~~l~---------------------------------------~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~G 136 (256)
T TIGR00688 96 SLEVSLGY---------------------------------------LINPLVMVALGRVFLKERISRFQFIAVIIATLG 136 (256)
T ss_pred HHHHHHHH---------------------------------------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 99998888 899999999999999999999999999999999
Q ss_pred hhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhh
Q 013023 278 VSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISK 357 (451)
Q Consensus 278 v~l~~~~~~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~ 357 (451)
+.++...+.+.+ .++++++++|+.|.+..||..++ +..+...+ ......+..+..+. +++.... ..
T Consensus 137 v~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~-~~------ 202 (256)
T TIGR00688 137 VISNIVLKGSLP----WEALVLAFSFTAYGLIRKALKNT-DLAGFCLE-TLSLMPVAIYYLLQ-TDFATVQ-QT------ 202 (256)
T ss_pred HHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhcCCC-CcchHHHH-HHHHHHHHHHHHHH-hccCccc-cc------
Confidence 998754322222 35788999999999999987543 33222221 11111122111111 1111000 00
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHH
Q 013023 358 VGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILA 411 (451)
Q Consensus 358 ~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~ 411 (451)
.....|..++..|++......+.+..+++.++.+.++..+++|+++.+++++.
T Consensus 203 -~~~~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 203 -NPFPIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred -CchhHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 00112334444455544444555677899999999999999999999999764
No 24
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.65 E-value=1e-13 Score=132.13 Aligned_cols=249 Identities=15% Similarity=0.156 Sum_probs=197.8
Q ss_pred HHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHHhhhc
Q 013023 128 NKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGE 207 (451)
Q Consensus 128 nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~ 207 (451)
.|.++..++ |.-++++|..++.+++...+ +|.+++.++++++.+...|+..++.+.+...+++.++.+....+.
T Consensus 31 Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~---RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiE-- 104 (292)
T COG5006 31 AKSLFPLVG-AAGVTALRLAIAALILLALF---RPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIE-- 104 (292)
T ss_pred HHHHccccC-hhhHHHHHHHHHHHHHHHHh---hHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhh--
Confidence 477777776 89999999999998877776 455566788899999999999999999999999999999999998
Q ss_pred hhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhcccc--
Q 013023 208 IWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE-- 285 (451)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~~-- 285 (451)
.+.|+.+++++ .+|. +...-+.+.+.|..+.....
T Consensus 105 -------------------------------------F~GPL~vA~~~----sRr~--~d~vwvaLAvlGi~lL~p~~~~ 141 (292)
T COG5006 105 -------------------------------------FTGPLAVALLS----SRRL--RDFVWVALAVLGIWLLLPLGQS 141 (292)
T ss_pred -------------------------------------hccHHHHHHHh----ccch--hhHHHHHHHHHHHHhheeccCC
Confidence 88998665543 3443 44445556677777664332
Q ss_pred -ccccHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHH
Q 013023 286 -LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFI 364 (451)
Q Consensus 286 -~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~ 364 (451)
.+.|..|..+++.++.||+.|.+..||.-+..+...-+.+-+.++.++.+|+.....++.++. +..+
T Consensus 142 ~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~------------p~ll 209 (292)
T COG5006 142 VWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFS------------PSLL 209 (292)
T ss_pred cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcC------------hHHH
Confidence 456899999999999999999999999987788888889999999999999988666655432 1233
Q ss_pred HHHHHHHHHHHHHHH-HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhh
Q 013023 365 SDLFWVGMFYHLYNQ-LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 437 (451)
Q Consensus 365 ~~l~~~gi~~~~~~~-~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~ 437 (451)
..-+..|++....-+ +....+++.+.-++++...++|.++.+.+++++||.+|..||.|++.++++..-.+..
T Consensus 210 ~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt 283 (292)
T COG5006 210 PLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLT 283 (292)
T ss_pred HHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccc
Confidence 334444555443333 3345689999999999999999999999999999999999999999999988755443
No 25
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.62 E-value=8.1e-16 Score=147.90 Aligned_cols=268 Identities=13% Similarity=0.171 Sum_probs=201.6
Q ss_pred HHHHHHHccCC-cHHHHHHHHHHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhc-hhHhHHH
Q 013023 126 ILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPK-RAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA-VAVSFTH 202 (451)
Q Consensus 126 i~nK~ll~~f~-~P~~lt~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~sl~~-vsvs~~~ 202 (451)
+.-+.+.++.| .-..+|+.|+++.+.-.++... +.+. +++++ .|.++..-..+...++++|+++++ ++++...
T Consensus 20 v~lE~L~~~~pgsgNLITFaqFlFia~eGlif~s-kf~~~k~kip---lk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHi 95 (330)
T KOG1583|consen 20 VFLELLVRNEPGSGNLITFAQFLFIATEGLIFTS-KFFTVKPKIP---LKDYAITVAMFFIVNVTNNYALKFNIPMPLHI 95 (330)
T ss_pred HHHHHHHHhCCCCeeehHHHHHHHHHHhceeeec-cccccCCCCc---hhhhheehheeeeeeeeccceeeecccceEEE
Confidence 33456666666 3468999999888766554431 1111 12333 344555555666778899999997 8899998
Q ss_pred HhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhc
Q 013023 203 TIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 282 (451)
Q Consensus 203 ~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~ 282 (451)
+.| +-.++-+++++++++++|++.+++.|++++++|+++.+
T Consensus 96 IfR---------------------------------------sgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcT 136 (330)
T KOG1583|consen 96 IFR---------------------------------------SGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICT 136 (330)
T ss_pred EEe---------------------------------------cCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEE
Confidence 888 88899999999999999999999999999999999874
Q ss_pred c---cccc--------------cc--HHHHHHHHHHHHHHHHHHHHHHhhcCC--CChHHHHHHHHHHHHHHHHHHHHHh
Q 013023 283 L---TELS--------------FN--WTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIV 341 (451)
Q Consensus 283 ~---~~~~--------------~~--~~G~~l~l~s~l~~al~~v~~kk~~~~--~~~~~l~~~~~~~s~l~llp~al~~ 341 (451)
. +|.. +- ..|+.+..++.+..+.-.++++...++ -++-+.++|+...+....+ +.
T Consensus 137 l~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Fl----f~ 212 (330)
T KOG1583|consen 137 LFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFL----FM 212 (330)
T ss_pred eecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHH----Hh
Confidence 3 2211 11 357788888888888888888877765 4788999999977765433 22
Q ss_pred hchhhhhcchhhhhhh---------hchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHh
Q 013023 342 EGPQLIKHGLSDAISK---------VGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAF 412 (451)
Q Consensus 342 e~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~f 412 (451)
.. ++.. .|....+. ...+..|.+++...+..+.+.-..|.+..+++++|.++.-++++.+..++|++.|
T Consensus 213 ~~-div~-~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF 290 (330)
T KOG1583|consen 213 GD-DIVS-HWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYF 290 (330)
T ss_pred cc-hHHH-HHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEe
Confidence 22 2211 12222221 1234567888999999999988889999999999999999999999999999999
Q ss_pred CCcCchhhHHHHHHHHHHHHHHHhhhhhHH
Q 013023 413 GNKISTQTGIGTVIAIAGVAAYSYIKAQME 442 (451)
Q Consensus 413 ge~ls~~~iiG~~lii~Gv~ly~~~~~~~~ 442 (451)
++++++..|+|.++++.|.++|.-...+.+
T Consensus 291 ~Npft~~h~lGa~lVF~Gt~~fa~~~~~~~ 320 (330)
T KOG1583|consen 291 ENPFTPWHWLGAALVFFGTLLFANVWNHPK 320 (330)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 999999999999999999999987666554
No 26
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.61 E-value=6.7e-13 Score=132.49 Aligned_cols=250 Identities=18% Similarity=0.206 Sum_probs=176.2
Q ss_pred HHHHHHHccCCcHHHHHHHHHHHHHHHHHHH-HHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHHh
Q 013023 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI 204 (451)
Q Consensus 126 i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~i 204 (451)
+..|++. .++.+..+ +..++.++.... ...+.++ ...++.+..-+..|++...++.+...+.++.+++.+..+
T Consensus 18 ~~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i 91 (290)
T TIGR00776 18 LINVKIG-GGPYSQTL---GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPI 91 (290)
T ss_pred HHHhccC-CCHHHHHH---HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHH
Confidence 3345555 45544443 566665554432 2222222 112444555666667788888999999999999998877
Q ss_pred hhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhH----HHHHHHHHHHhhh
Q 013023 205 KGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTL----WLSLAPVVIGVSM 280 (451)
Q Consensus 205 k~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~----~lsl~~~~~Gv~l 280 (451)
.+ .+.|+++.+.+.+++|||.++++ +++++++++|+.+
T Consensus 92 ~~--------------------------------------~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l 133 (290)
T TIGR00776 92 ST--------------------------------------GFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYL 133 (290)
T ss_pred HH--------------------------------------HHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHhe
Confidence 71 37788999999999999999999 9999999999998
Q ss_pred hcccccc-------cc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHH---HHHHHHHHHHHHhhchhhhhc
Q 013023 281 ASLTELS-------FN-WTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISI---IALFVCIPPAIIVEGPQLIKH 349 (451)
Q Consensus 281 ~~~~~~~-------~~-~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~---~s~l~llp~al~~e~~~~~~~ 349 (451)
....+.+ .+ ..|++++++++++|+++.+..|+. +.||.+..+.+.. ++..+..+... ...+ .
T Consensus 134 ~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~-~--- 206 (290)
T TIGR00776 134 TSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGHI-LAKP-L--- 206 (290)
T ss_pred EEeccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHHh-cccc-h---
Confidence 8653221 33 689999999999999999999987 4788877444433 33333222210 0011 0
Q ss_pred chhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhh-hcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhH----HHH
Q 013023 350 GLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLE-RVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTG----IGT 424 (451)
Q Consensus 350 ~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~-~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~i----iG~ 424 (451)
.....+..++ .|++....+...+...+ +.++.+.++...++|+.+.+++++++||+.+..|+ +|.
T Consensus 207 ---------~~~~~~~~~~-~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~ 276 (290)
T TIGR00776 207 ---------KKYAILLNIL-PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGI 276 (290)
T ss_pred ---------HHHHHHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHH
Confidence 0012223333 67765444444456677 99999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHh
Q 013023 425 VIAIAGVAAYSY 436 (451)
Q Consensus 425 ~lii~Gv~ly~~ 436 (451)
++++.|+.+-..
T Consensus 277 ~lIi~~~~l~~~ 288 (290)
T TIGR00776 277 ILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHhc
Confidence 999999987654
No 27
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.61 E-value=2.8e-16 Score=150.37 Aligned_cols=269 Identities=17% Similarity=0.128 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhchh
Q 013023 118 YFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVA 197 (451)
Q Consensus 118 ~~~~~~~~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~sl~~vs 197 (451)
|++|.+..+..|-+.+ .|.-....|+++-.+...++....... .--+....+.++..|+....+.....+++.|.+
T Consensus 47 ~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~~~~-v~gp~g~R~~LiLRg~mG~tgvmlmyya~~~ms 122 (346)
T KOG4510|consen 47 YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYYMQP-VIGPEGKRKWLILRGFMGFTGVMLMYYALMYMS 122 (346)
T ss_pred HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEEeee-eecCCCcEEEEEeehhhhhhHHHHHHHHHhhcc
Confidence 6667777666555543 478888888666555444332111100 000112233456667777788888999999999
Q ss_pred HhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHH
Q 013023 198 VSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 277 (451)
Q Consensus 198 vs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~G 277 (451)
.+-+..+. .+.|+|+.++++.++||++++...++..+.+.|
T Consensus 123 laDA~vIt---------------------------------------FssPvft~ifaw~~LkE~~t~~eaL~s~itl~G 163 (346)
T KOG4510|consen 123 LADAVVIT---------------------------------------FSSPVFTIIFAWAFLKEPFTKFEALGSLITLLG 163 (346)
T ss_pred hhheEEEE---------------------------------------ecChHHHHHHHHHHHcCCCcHHHHHHHHHhhhe
Confidence 99998888 899999999999999999999999999999999
Q ss_pred hhhhccc-----c---------ccccHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 013023 278 VSMASLT-----E---------LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEG 343 (451)
Q Consensus 278 v~l~~~~-----~---------~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~ 343 (451)
|++++-. | .+.+..|...++.+.++-+-..++.|+..++.|....+.|.+.++++..+........
T Consensus 164 VVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~ 243 (346)
T KOG4510|consen 164 VVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGA 243 (346)
T ss_pred EEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccc
Confidence 9988422 1 1234568888899999988888999999899998888888888888776655443333
Q ss_pred hhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHH
Q 013023 344 PQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIG 423 (451)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG 423 (451)
.++.+ .+.+ +..++..|++++..++...+.+++-.+-..++..+..-+++.++.+++|||.++...++|
T Consensus 244 ~~lP~-cgkd----------r~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~G 312 (346)
T KOG4510|consen 244 VQLPH-CGKD----------RWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVG 312 (346)
T ss_pred eecCc-cccc----------eEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhc
Confidence 33322 2111 223455678888888887777777666667888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhh
Q 013023 424 TVIAIAGVAAYSYIKAQ 440 (451)
Q Consensus 424 ~~lii~Gv~ly~~~~~~ 440 (451)
+++++....+....|..
T Consensus 313 a~~vvsS~v~~a~~kwa 329 (346)
T KOG4510|consen 313 AVMVVSSTVWVALKKWA 329 (346)
T ss_pred eeeeehhHHHHHHHHHh
Confidence 99999999887766544
No 28
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.53 E-value=1.9e-12 Score=126.15 Aligned_cols=212 Identities=16% Similarity=0.180 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhH
Q 013023 169 SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEP 248 (451)
Q Consensus 169 ~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~P 248 (451)
++...++..-+++++..+.+..+++.+++.+.+++++ .+..
T Consensus 14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~---------------------------------------q~kI 54 (244)
T PF04142_consen 14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLS---------------------------------------QSKI 54 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHH---------------------------------------hhHH
Confidence 3445556666888999999999999999999999999 8999
Q ss_pred HHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhccccc-----------------cccHHHHHHHHHHHHHHHHHHHHHH
Q 013023 249 FFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-----------------SFNWTGFISAMISNISFTYRSIYSK 311 (451)
Q Consensus 249 vf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~~~-----------------~~~~~G~~l~l~s~l~~al~~v~~k 311 (451)
+++++++++++|+|+++++|.++.+.++|+++...++. .....|+++.+.+.++.++..++.+
T Consensus 55 l~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E 134 (244)
T PF04142_consen 55 LFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFE 134 (244)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998843221 1136899999999999999999999
Q ss_pred hhcCCC--ChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 013023 312 KAMTDM--DSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVA 389 (451)
Q Consensus 312 k~~~~~--~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s 389 (451)
|.+|+- +.+..+......+.++.++...+.++....+.|+. ...+. ..|..++..++.+.+... .+++.+
T Consensus 135 ~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f---~G~~~-~~~~~i~~~a~gGllva~----v~Kyad 206 (244)
T PF04142_consen 135 KLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFF---HGYSW-WVWIVIFLQAIGGLLVAF----VLKYAD 206 (244)
T ss_pred HHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCch---hhcch-HHHHHHHHHHHhhHHHHH----HHHHHh
Confidence 999764 44555555566666666665555554444333322 11221 234455555555544443 469999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHH
Q 013023 390 PLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIA 427 (451)
Q Consensus 390 ~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~li 427 (451)
.+.......+.-+++.++++++||.++|....+|..++
T Consensus 207 nI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 207 NIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 99999999999999999999999999999999998653
No 29
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.48 E-value=5e-13 Score=133.69 Aligned_cols=222 Identities=18% Similarity=0.237 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHH
Q 013023 172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFN 251 (451)
Q Consensus 172 ~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~ 251 (451)
.+..+..+.+....++++|.++++.+|+..+++. ++.-+|+
T Consensus 159 ak~sl~fc~lWF~anl~~naALa~TsVAS~TilS---------------------------------------StSs~Ft 199 (416)
T KOG2765|consen 159 AKLSLFFCPLWFLANLTSNAALAFTSVASTTILS---------------------------------------STSSFFT 199 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhh---------------------------------------hcchHHH
Confidence 4444455555567788999999999999999998 7888999
Q ss_pred HHHHHHHhCcccChhHHHHHHHHHHHhhhhcccc--------ccccHHHHHHHHHHHHHHHHHHHHHHhhcC----CCCh
Q 013023 252 AAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE--------LSFNWTGFISAMISNISFTYRSIYSKKAMT----DMDS 319 (451)
Q Consensus 252 ~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~~--------~~~~~~G~~l~l~s~l~~al~~v~~kk~~~----~~~~ 319 (451)
.+++.++.+||+++.|.+++++.++|+++++.+| .+....|.++++++++.|++|.++.||... ++|.
T Consensus 200 L~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi 279 (416)
T KOG2765|consen 200 LFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDI 279 (416)
T ss_pred HHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccH
Confidence 9999999999999999999999999999998774 233489999999999999999999998874 3566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHH-HHHHHHhhhcChHHHHHHHH
Q 013023 320 TNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYN-QLATNTLERVAPLTHAVGNV 398 (451)
Q Consensus 320 ~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-~~~~~~l~~~s~lt~sv~~~ 398 (451)
..+..|..++..+++.|..++.+.-....... ..... ...++..++.+.+.. ++..+..-.++|++..+...
T Consensus 280 ~lffGfvGLfnllllwP~l~iL~~~~~e~F~l------P~~~q-~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmS 352 (416)
T KOG2765|consen 280 QLFFGFVGLFNLLLLWPPLIILDFFGEERFEL------PSSTQ-FSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMS 352 (416)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhccCcccC------CCCce-eEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeee
Confidence 67777888888888888877654221111111 11111 122334444443332 33345667899999999999
Q ss_pred HHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhhh
Q 013023 399 LKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 439 (451)
Q Consensus 399 lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~~ 439 (451)
+.-.++++..+++=|.++|+.+++|.+.++.|.+..++...
T Consensus 353 ltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 353 LTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred EeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 99999999999999999999999999999999998876543
No 30
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.42 E-value=1.6e-10 Score=115.83 Aligned_cols=223 Identities=13% Similarity=0.146 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHH
Q 013023 172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFN 251 (451)
Q Consensus 172 ~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~ 251 (451)
..++..-+++++..+-+..+++.+.+.+++++.. .+-.+.+
T Consensus 92 ~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~---------------------------------------qlKI~tT 132 (345)
T KOG2234|consen 92 TLKVSVPALIYALQNNLQYVALSNLDAATYQVTY---------------------------------------QLKILTT 132 (345)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhh---------------------------------------hHHHHHH
Confidence 3445555678888777999999999999999998 7888999
Q ss_pred HHHHHHHhCcccChhHHHHHHHHHHHhhhhccc---c--------ccccHHHHHHHHHHHHHHHHHHHHHHhhcCC--CC
Q 013023 252 AAASQFILGQQLPLTLWLSLAPVVIGVSMASLT---E--------LSFNWTGFISAMISNISFTYRSIYSKKAMTD--MD 318 (451)
Q Consensus 252 ~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~---~--------~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~--~~ 318 (451)
+++..+++++|+++++|.++++.++|+.+.-.+ + ....+.|+.+.+.+...-++-.++.+|.+|+ .+
T Consensus 133 A~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s 212 (345)
T KOG2234|consen 133 AIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVS 212 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 999999999999999999999999999998511 1 2235889999999999999999999999964 45
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHH
Q 013023 319 STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNV 398 (451)
Q Consensus 319 ~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~ 398 (451)
.+-.+.-...++.++.+...+..++.... |...+..... ..|..++..++-+.+.... +++.+-+.......
T Consensus 213 ~wi~NiqL~~~g~~f~~l~~~~~d~~~i~---~~gff~G~s~-~vw~vVl~~a~gGLlvs~v----~KyADnIlK~f~~s 284 (345)
T KOG2234|consen 213 LWIRNIQLYFFGILFNLLTILLQDGEAIN---EYGFFYGYSS-IVWLVVLLNAVGGLLVSLV----MKYADNILKGFSTS 284 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccc---cCCccccccH-HHHHHHHHHhccchhHHHH----HHHhHHHHHHHHHH
Confidence 55444445555555555554444544332 2222222221 3455666666655555544 58888888888888
Q ss_pred HHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhhhhH
Q 013023 399 LKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQM 441 (451)
Q Consensus 399 lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~~~~ 441 (451)
+..+++.+.|+.+||.++|....+|..+++..+.+|+..++++
T Consensus 285 ~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 285 VAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 9999999999999999999999999999999999999766654
No 31
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.42 E-value=6.9e-10 Score=108.55 Aligned_cols=185 Identities=15% Similarity=0.216 Sum_probs=135.9
Q ss_pred chhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHH
Q 013023 245 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYA 324 (451)
Q Consensus 245 ~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~ 324 (451)
...|+++++++.+++|||+++.+|+++++..+||..-.....+..|..+.+ +++|++|...-|+. ++|+.+-..
T Consensus 106 ~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~Ygl~RK~~--~v~a~~g~~ 179 (293)
T COG2962 106 FINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGLYGLLRKKL--KVDALTGLT 179 (293)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHHHHHHHHhc--CCchHHhHH
Confidence 458999999999999999999999999999999999988878888876544 46889998877766 566665544
Q ss_pred HHHHHHHHHHHHHHHHhhc-hhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHH
Q 013023 325 YISIIALFVCIPPAIIVEG-PQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVF 403 (451)
Q Consensus 325 ~~~~~s~l~llp~al~~e~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~ 403 (451)
.-+..-....+.+.+..+. +++.. .+....+..++..|....+--.+.-..-++.+-.+.++..+++|..
T Consensus 180 lE~l~l~p~al~yl~~l~~~~~~~~---------~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl 250 (293)
T COG2962 180 LETLLLLPVALIYLLFLADSGQFLQ---------QNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTL 250 (293)
T ss_pred HHHHHHhHHHHHHHHHHhcCchhhh---------cCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 4444444444444343332 21110 0112234555666655443322223446899999999999999999
Q ss_pred HHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhhhhHHHH
Q 013023 404 VIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEE 444 (451)
Q Consensus 404 ~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~~~~~~~ 444 (451)
..+++++++||+++..+.+..+.+-+|..+|.....+..++
T Consensus 251 ~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~ 291 (293)
T COG2962 251 MFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARK 291 (293)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999877655443
No 32
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.37 E-value=8.6e-11 Score=113.70 Aligned_cols=227 Identities=17% Similarity=0.224 Sum_probs=175.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHH
Q 013023 173 KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNA 252 (451)
Q Consensus 173 ~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~ 252 (451)
+..+|-++|-..+..+.++++.+.+.+.+||++ ....+|+.
T Consensus 87 ~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlR---------------------------------------GaviIFvg 127 (372)
T KOG3912|consen 87 VLFLPPALCDIAGSSLMYVGLNLTSASSFQMLR---------------------------------------GAVIIFVG 127 (372)
T ss_pred ceecChHHHHHhhhHHHHHHHHHhhHHHHHHhh---------------------------------------cchhhhhH
Confidence 356678889888899999999999999999999 67788999
Q ss_pred HHHHHHhCcccChhHHHHHHHHHHHhhhhcccc----------ccccHHHHHHHHHHHHHHHHHHHHHHhhcC--CCChH
Q 013023 253 AASQFILGQQLPLTLWLSLAPVVIGVSMASLTE----------LSFNWTGFISAMISNISFTYRSIYSKKAMT--DMDST 320 (451)
Q Consensus 253 lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~~----------~~~~~~G~~l~l~s~l~~al~~v~~kk~~~--~~~~~ 320 (451)
+++..+++++++.++|+++..+.+|++++...| .+.-..|.++.+++-+..+...++-+|..+ +++|.
T Consensus 128 lfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl 207 (372)
T KOG3912|consen 128 LFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPL 207 (372)
T ss_pred HHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHH
Confidence 999999999999999999999999999885443 233478999999999999999999988775 47899
Q ss_pred HHHHHHHHHHHHHHHHHHHH----hhchhhh--hc----chhhhhhhhch-HHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 013023 321 NIYAYISIIALFVCIPPAII----VEGPQLI--KH----GLSDAISKVGM-VKFISDLFWVGMFYHLYNQLATNTLERVA 389 (451)
Q Consensus 321 ~l~~~~~~~s~l~llp~al~----~e~~~~~--~~----~~~~~~~~~~~-~~~~~~l~~~gi~~~~~~~~~~~~l~~~s 389 (451)
+...|..+++.+++...+.. ..+..+. .+ +|.+.+...+- +.....+...-+.-.++|+......++.|
T Consensus 208 ~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~S 287 (372)
T KOG3912|consen 208 QAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELS 287 (372)
T ss_pred HHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhh
Confidence 99999999886554433332 2221110 11 12233332221 12222222222333456666666778999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhh
Q 013023 390 PLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 438 (451)
Q Consensus 390 ~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~ 438 (451)
+.|-.+...++..+.-+++.....|.+...|+.|.++.+.|+++|+..-
T Consensus 288 attRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~il 336 (372)
T KOG3912|consen 288 ATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQIL 336 (372)
T ss_pred HHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998543
No 33
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.06 E-value=1.4e-09 Score=104.03 Aligned_cols=179 Identities=17% Similarity=0.149 Sum_probs=121.2
Q ss_pred chhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhcccc---------------------------ccccHHHHHHHH
Q 013023 245 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---------------------------LSFNWTGFISAM 297 (451)
Q Consensus 245 ~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~~---------------------------~~~~~~G~~l~l 297 (451)
+..++++++......++|++..++++.++++.|+.....+| .+..+.|..+.+
T Consensus 12 s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~~~~g~~~~l 91 (222)
T TIGR00803 12 QNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGNPVVGLSAVL 91 (222)
T ss_pred hcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccccHHHHHHHHH
Confidence 77888889999999999999999999999999987532211 123467888888
Q ss_pred HHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHH-HHhh----chhhhhcchhhhhhhhchHHHHHHHHHHHH
Q 013023 298 ISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPA-IIVE----GPQLIKHGLSDAISKVGMVKFISDLFWVGM 372 (451)
Q Consensus 298 ~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~a-l~~e----~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 372 (451)
.+..+.++..+++++..++.+. +.|...++..+..+.. ...+ +......+. ..+++.....++ +
T Consensus 92 ~a~~~~~~~~~y~e~~~k~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~ 160 (222)
T TIGR00803 92 SALLSSGFAGVYFEKILKDGDT---MFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGF-----FIGYPTAVWIVG---L 160 (222)
T ss_pred HHHHHHhhhHHHHHHcccCCCC---chHHHHHHHHHHHHHHHHHHHhhcccchhhccCc-----ccCCchHHHHHH---H
Confidence 8888999999999988765432 2444333333322221 1111 111111110 011122111222 2
Q ss_pred HHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHH
Q 013023 373 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 434 (451)
Q Consensus 373 ~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly 434 (451)
.......+..+++++.++.+.++...++++++.++|+++|||+++..+++|..+++.|+++|
T Consensus 161 ~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 161 LNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 22333344567789999999999999999999999999999999999999999999998765
No 34
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.00 E-value=3.8e-09 Score=90.20 Aligned_cols=119 Identities=17% Similarity=0.320 Sum_probs=97.8
Q ss_pred HHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH-HHHhCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHhhhchhHhH
Q 013023 123 IFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVSF 200 (451)
Q Consensus 123 ~~~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~sl~~vsvs~ 200 (451)
...+++|+..++++ |...+++|+.++.+ +.+ ....+..+....+++.+...+..+++ ...+..+.+.++++.+++.
T Consensus 5 ~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 82 (126)
T PF00892_consen 5 IYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASI 82 (126)
T ss_pred eHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhH
Confidence 44677899999988 99999999999986 333 23222222244556667777777776 5788999999999999999
Q ss_pred HHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhh
Q 013023 201 THTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 280 (451)
Q Consensus 201 ~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l 280 (451)
..++. .++|+++.++++++++|+++++++.+++++++|+.+
T Consensus 83 ~~~~~---------------------------------------~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l 123 (126)
T PF00892_consen 83 VSILQ---------------------------------------YLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVL 123 (126)
T ss_pred HHHHH---------------------------------------HHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 99999 899999999999999999999999999999999987
Q ss_pred hc
Q 013023 281 AS 282 (451)
Q Consensus 281 ~~ 282 (451)
+.
T Consensus 124 ~~ 125 (126)
T PF00892_consen 124 IS 125 (126)
T ss_pred HH
Confidence 64
No 35
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.89 E-value=1.7e-08 Score=86.07 Aligned_cols=124 Identities=21% Similarity=0.247 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHH-HHHHHH
Q 013023 301 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMF-YHLYNQ 379 (451)
Q Consensus 301 l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~-~~~~~~ 379 (451)
++|+.+.++.|+..++.|+.....+....+.+ +++...+.+..+... ... ..+..+...|++ ..+.+.
T Consensus 1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~ 69 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKN---------LSP-RQWLWLLFLGLLGTALAYL 69 (126)
T ss_pred ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccC---------CCh-hhhhhhhHhhccceehHHH
Confidence 46889999999999999999999999999998 666666655432111 111 112333444444 344555
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHH
Q 013023 380 LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 435 (451)
Q Consensus 380 ~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~ 435 (451)
..+..+++.++...++...+.|+++.++++++++|+++..+++|.++++.|+.+.+
T Consensus 70 ~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 70 LYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 56677899999999999999999999999999999999999999999999998754
No 36
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.86 E-value=3.9e-10 Score=107.95 Aligned_cols=262 Identities=10% Similarity=0.079 Sum_probs=184.9
Q ss_pred HHHHHHHHHcc-CCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHH
Q 013023 124 FNILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 202 (451)
Q Consensus 124 ~~i~nK~ll~~-f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~ 202 (451)
.++.+..+-.. .+-|..=+++....-++.-.+....+. +.-...|+.++.+++.-.-++++-.-+++|.+....+
T Consensus 33 ~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~ 108 (336)
T KOG2766|consen 33 TAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR----KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIM 108 (336)
T ss_pred chhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh----HHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHH
Confidence 34445555443 556777777666554433222222222 2223346667877777665565666788888887777
Q ss_pred HhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhc
Q 013023 203 TIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 282 (451)
Q Consensus 203 ~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~ 282 (451)
.+.| -..|. +.++++++++.|+.+.++.+++++..|+.+++
T Consensus 109 lLDc--------------------------------------waip~-v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV 149 (336)
T KOG2766|consen 109 LLDC--------------------------------------WAIPC-VLVLSWFFLKTRYRLMKISGVVICIVGVVMVV 149 (336)
T ss_pred HHHH--------------------------------------hhhHH-HHHHHHHHHHHHHhhheeeeEEeEecceEEEE
Confidence 7772 33455 88999999999999999999999999999987
Q ss_pred cccc--------cccHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhh
Q 013023 283 LTEL--------SFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDA 354 (451)
Q Consensus 283 ~~~~--------~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~ 354 (451)
..|. +....|+++.++++-+|+..|+..+.+.++.|..+++....++++++..+= +++|......-.|+
T Consensus 150 ~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~-- 226 (336)
T KOG2766|consen 150 FSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWD-- 226 (336)
T ss_pred EeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeeh--
Confidence 6551 234679999999999999999999999999999999999999998887665 44554433221121
Q ss_pred hhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHH
Q 013023 355 ISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 434 (451)
Q Consensus 355 ~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly 434 (451)
+-+...+...++-++..-..-.+++..|+...++.......++++. ..||-+.++...+..+.+..|.++|
T Consensus 227 -------~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiY 297 (336)
T KOG2766|consen 227 -------SAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIY 297 (336)
T ss_pred -------HHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEe
Confidence 1112222233333333333445678888888888888889998887 7889999999999999999999999
Q ss_pred Hhhhhh
Q 013023 435 SYIKAQ 440 (451)
Q Consensus 435 ~~~~~~ 440 (451)
.-..+.
T Consensus 298 s~re~~ 303 (336)
T KOG2766|consen 298 STREKD 303 (336)
T ss_pred eccccC
Confidence 644433
No 37
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.84 E-value=6e-07 Score=88.29 Aligned_cols=211 Identities=18% Similarity=0.172 Sum_probs=156.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhH
Q 013023 169 SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEP 248 (451)
Q Consensus 169 ~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~P 248 (451)
...+..-+..|++...++.....|++++++|.+.-+.+ .+.-
T Consensus 42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiSt--------------------------------------g~QL 83 (269)
T PF06800_consen 42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPIST--------------------------------------GLQL 83 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccch--------------------------------------hHHH
Confidence 36677788889999999999999999999998877773 6677
Q ss_pred HHHHHHHHHHhCcccChhHH----HHHHHHHHHhhhhccccccc--------cHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 013023 249 FFNAAASQFILGQQLPLTLW----LSLAPVVIGVSMASLTELSF--------NWTGFISAMISNISFTYRSIYSKKAMTD 316 (451)
Q Consensus 249 vf~~lls~~~l~ek~~~~~~----lsl~~~~~Gv~l~~~~~~~~--------~~~G~~l~l~s~l~~al~~v~~kk~~~~ 316 (451)
+.+.++++++++|--+...+ ++++++++|+.+.+.+|.+. ...|+...+++.+.|..|.+..|-. +
T Consensus 84 vg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~ 161 (269)
T PF06800_consen 84 VGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--H 161 (269)
T ss_pred HHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--C
Confidence 88999999999997776665 48889999999998765322 2458999999999999999997664 6
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHH
Q 013023 317 MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVG 396 (451)
Q Consensus 317 ~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~ 396 (451)
.|+++...=+++-..+..+.+..+.+ .... .+.. +. -+..|++....|...+...++.+..+.=..
T Consensus 162 ~~~~~~~lPqaiGm~i~a~i~~~~~~-~~~~--------~k~~----~~-nil~G~~w~ignl~~~is~~~~G~a~af~l 227 (269)
T PF06800_consen 162 VSGWSAFLPQAIGMLIGAFIFNLFSK-KPFF--------EKKS----WK-NILTGLIWGIGNLFYLISAQKNGVATAFTL 227 (269)
T ss_pred CChhHhHHHHHHHHHHHHHHHhhccc-cccc--------ccch----HH-hhHHHHHHHHHHHHHHHhHHhccchhhhhH
Confidence 78888777666555554444444331 1111 1111 11 235666666777776667788888887778
Q ss_pred HHHHHHHHHHHHHHHhCCcCchh----hHHHHHHHHHHHHH
Q 013023 397 NVLKRVFVIGFSILAFGNKISTQ----TGIGTVIAIAGVAA 433 (451)
Q Consensus 397 ~~lk~v~~i~ls~i~fge~ls~~----~iiG~~lii~Gv~l 433 (451)
.-+..+++.+.++++++|+=+.. .++|.++++.|..+
T Consensus 228 SQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 228 SQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 88889999999999999986654 55688878777653
No 38
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.76 E-value=4.7e-08 Score=84.73 Aligned_cols=133 Identities=20% Similarity=0.158 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHH
Q 013023 293 FISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGM 372 (451)
Q Consensus 293 ~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 372 (451)
.++++++++++++..++.|--.+++||..-+..-++....++..+.+....++... .. ....|..++.+|+
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~--------~~-~~k~~lflilSGl 75 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGG--------EI-GPKSWLFLILSGL 75 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceeccc--------cc-CcceehhhhHHHH
Confidence 57899999999999999999999999998888888888888777766554433210 01 1245677888888
Q ss_pred HHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHH
Q 013023 373 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 434 (451)
Q Consensus 373 ~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly 434 (451)
..-...++.|+.++.-.+....-..-..++++.++|++++||++|..+++|.+++.+|+.+.
T Consensus 76 a~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv 137 (140)
T COG2510 76 AGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV 137 (140)
T ss_pred HHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence 77777777788888887777777777899999999999999999999999999999998754
No 39
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.66 E-value=1.6e-06 Score=86.70 Aligned_cols=142 Identities=15% Similarity=0.119 Sum_probs=106.7
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHH
Q 013023 286 LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFIS 365 (451)
Q Consensus 286 ~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~ 365 (451)
......|.++.+++.++|+...+..|.. .+++|.++..+...++.++++++.......+..+ ... ... ..+.
T Consensus 3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~----~~~--~~~-~~~~ 74 (296)
T PRK15430 3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLK----TLI--QTP-QKIF 74 (296)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHH----HHH--cCH-HHHH
Confidence 3445689999999999999999999765 6799999999999999887777654432111100 000 011 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHH
Q 013023 366 DLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 435 (451)
Q Consensus 366 ~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~ 435 (451)
..+..+......+.+.+..++.+++...++.....|+++.++++++++|+++..+++|+++.+.|+.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 75 MLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 2223333344455566788999999999999999999999999999999999999999999999998754
No 40
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.62 E-value=1.5e-07 Score=87.43 Aligned_cols=219 Identities=13% Similarity=0.082 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHH
Q 013023 171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFF 250 (451)
Q Consensus 171 ~~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf 250 (451)
..++..|..++..+.++.+-.+++.++.+.++.+. ++...|
T Consensus 52 ~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~---------------------------------------~CNaAF 92 (290)
T KOG4314|consen 52 FFIRTAPFSIFWTGANYLYLLALKKISASDASAIF---------------------------------------ACNAAF 92 (290)
T ss_pred eeeeecceEEEEecCCcHHHHHHHhcChhhhHHHH---------------------------------------HhhHHH
Confidence 34556677777778888999999999999998888 888899
Q ss_pred HHHHHHHHhCcccChhHHHHHHHHHHHhhhhcccc--ccccHHHHHHHHHHHHHHHHHHHHHHhhcCCCC---hHHHHHH
Q 013023 251 NAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE--LSFNWTGFISAMISNISFTYRSIYSKKAMTDMD---STNIYAY 325 (451)
Q Consensus 251 ~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~~--~~~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~---~~~l~~~ 325 (451)
+.+++++.+++++...++++.++.+.|++++.+.| ...++.|+.++.+|+..-++|.++.|+...+-+ ....+..
T Consensus 93 VfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~ 172 (290)
T KOG4314|consen 93 VFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSC 172 (290)
T ss_pred HHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHH
Confidence 99999999999999999999999999999998765 345799999999999999999999999876533 2222222
Q ss_pred HHHHHHHHH-HHHH-HHh---hchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHH
Q 013023 326 ISIIALFVC-IPPA-IIV---EGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLK 400 (451)
Q Consensus 326 ~~~~s~l~l-lp~a-l~~---e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk 400 (451)
...+..++. +|.. +.. |.++.+ .. .-|..++..+.+....|+....-+..+.|+..|+.+...
T Consensus 173 LGF~NL~~~~~~~lIL~~T~VE~~qsF--------A~----~PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~ 240 (290)
T KOG4314|consen 173 LGFFNLCFISFPALILAFTGVEHLQSF--------AA----APWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCG 240 (290)
T ss_pred HHHHHHHHHhhhHHHHHHhchHHHHHH--------hh----CCchhhhhHHHHHHHHhhheeehhhhhchhhheehheec
Confidence 222222222 1111 111 222211 11 124445544455555565554446788899999999888
Q ss_pred HHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhhhh
Q 013023 401 RVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 440 (451)
Q Consensus 401 ~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~~~ 440 (451)
-........++=+-..+...+.|.+++..|..+......+
T Consensus 241 iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~ 280 (290)
T KOG4314|consen 241 IPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPEDK 280 (290)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccch
Confidence 8888888888777778999999999999999876654443
No 41
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.62 E-value=2.1e-06 Score=83.75 Aligned_cols=140 Identities=17% Similarity=0.252 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHH
Q 013023 291 TGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 370 (451)
Q Consensus 291 ~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 370 (451)
.|.++.++++++|+...+..|. ..+++|.++.++-+.++.+++++...........+..+ ........+..+...
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 76 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERL----KRIQKRPLILSLLLC 76 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHH----hCcccchHHHHHHHH
Confidence 3788999999999999999998 46799999999999999888776654432211000000 000111223345556
Q ss_pred HHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHH
Q 013023 371 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 435 (451)
Q Consensus 371 gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~ 435 (451)
|++....+.+.+..++++++.+.++.....|+++.++++++++|+++..+++|.++.++|+.+-.
T Consensus 77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 66655666666788899999999999999999999999999999999999999999999998653
No 42
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.58 E-value=3e-07 Score=78.94 Aligned_cols=105 Identities=19% Similarity=0.330 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHh-CCCCC--CCCCHHHHHHHHHHHHHHH-HHHHHHHHhhhchhHhHHHHhhhchhcccccCchh
Q 013023 143 VIHLLVGVVYCLVSWAV-GLPKR--APIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENH 218 (451)
Q Consensus 143 ~~~~~~~~l~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~l~~~-~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~ 218 (451)
.+|+.++.+.+...... +..+. +...++.+......+++.. ....+..+++++.+ +....+.
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~------------- 67 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIF------------- 67 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHH-------------
Confidence 46777776665543322 11110 1111233444555566655 77889999999999 5666777
Q ss_pred HHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhcccccc
Q 013023 219 FILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELS 287 (451)
Q Consensus 219 ~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~~~~ 287 (451)
++.|+|+++++.+++|||++++++.+++++++|++++..+|.+
T Consensus 68 --------------------------~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 68 --------------------------SLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred --------------------------HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 8999999999999999999999999999999999999887754
No 43
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.52 E-value=1.1e-06 Score=76.33 Aligned_cols=119 Identities=21% Similarity=0.277 Sum_probs=98.5
Q ss_pred HHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-hCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHH
Q 013023 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWA-VGLPK-RAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 202 (451)
Q Consensus 125 ~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~ 202 (451)
.+..|..+++.+ |.+-+++|-.+...++..... .+..+ ...++++.|..+..-|+..+.+-.++..+++.-.+|-..
T Consensus 19 ~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~Vv 97 (140)
T COG2510 19 PIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVV 97 (140)
T ss_pred HHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEE
Confidence 467799998887 999999999999877765443 33322 123567778888888888888899999999998888877
Q ss_pred HhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhc
Q 013023 203 TIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 282 (451)
Q Consensus 203 ~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~ 282 (451)
-+. .+.|++++++++++++||++..+|++++++++|+++.+
T Consensus 98 Pld---------------------------------------k~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 98 PLD---------------------------------------KTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred Ecc---------------------------------------cccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 777 89999999999999999999999999999999998865
Q ss_pred c
Q 013023 283 L 283 (451)
Q Consensus 283 ~ 283 (451)
.
T Consensus 139 ~ 139 (140)
T COG2510 139 L 139 (140)
T ss_pred c
Confidence 3
No 44
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.46 E-value=5.5e-06 Score=82.14 Aligned_cols=133 Identities=11% Similarity=0.066 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHH
Q 013023 293 FISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGM 372 (451)
Q Consensus 293 ~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 372 (451)
+++.++++++++.+.+..|+..++.++. ..+.+..+.+.++|+........ .+. ..+ ...+..++..++
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~----~~~----~~~-~~~~~~~~~~~~ 71 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQV----GWS----RLP-ATFWLLLAISAV 71 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccC----CCC----Ccc-hhhHHHHHHHHH
Confidence 4678899999999999999887764443 45556666777777665421111 011 001 112334455566
Q ss_pred HHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHh
Q 013023 373 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 436 (451)
Q Consensus 373 ~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~ 436 (451)
....+..+.+...++.++...++.....|+++.+++++++||+++..+++|.++++.|+.+-..
T Consensus 72 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 72 ANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 5666666767778999999999999999999999999999999999999999999999987553
No 45
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.35 E-value=1.8e-05 Score=81.57 Aligned_cols=137 Identities=14% Similarity=0.220 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHH
Q 013023 291 TGFISAMISNISFTYRSIYSKKAMT-DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFW 369 (451)
Q Consensus 291 ~G~~l~l~s~l~~al~~v~~kk~~~-~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~ 369 (451)
.-+...+..-++|+..+++.|..++ .+++..+.+|-..++.++++|++...+.....+ ... ...+..+..
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~--------~~~-~~~~~~l~l 83 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLP--------PLS-VSILSKIGL 83 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccC--------cch-HHHHHHHHH
Confidence 3456677788999999999998885 589999999999999999999887654321111 000 112344555
Q ss_pred HHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHH------hCCcCchhhHHHHHHHHHHHHHHHh
Q 013023 370 VGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILA------FGNKISTQTGIGTVIAIAGVAAYSY 436 (451)
Q Consensus 370 ~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~------fge~ls~~~iiG~~lii~Gv~ly~~ 436 (451)
.|+++..++...+..++.+++...++...+.|+++.++++++ ++|+++..+++|+++.++|+.+-..
T Consensus 84 ~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 84 LGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 666665566667788899999999999999999999999999 6999999999999999999987554
No 46
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.27 E-value=5e-05 Score=73.72 Aligned_cols=118 Identities=20% Similarity=0.125 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHccCC-cHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHhhhchhHh
Q 013023 122 VIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVS 199 (451)
Q Consensus 122 ~~~~i~nK~ll~~f~-~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~sl~~vsvs 199 (451)
....++.|+..++.+ .+......++.++.+++.+......+. ...+.+.+...+..+++ ...+..+.+.++++.+++
T Consensus 141 a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 219 (260)
T TIGR00950 141 ALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN-PQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPS 219 (260)
T ss_pred HHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 455677888887655 244555577888877665543322222 22345555555656655 457888999999999999
Q ss_pred HHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhh
Q 013023 200 FTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVS 279 (451)
Q Consensus 200 ~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~ 279 (451)
....+. .++|++++++++++++|+++..++.+.+++++|+.
T Consensus 220 ~~s~~~---------------------------------------~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 220 AASILA---------------------------------------LAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHH---------------------------------------HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 999998 89999999999999999999999999999999863
No 47
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=97.97 E-value=0.00041 Score=69.26 Aligned_cols=120 Identities=22% Similarity=0.279 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHhhhchhHhH
Q 013023 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVSF 200 (451)
Q Consensus 122 ~~~~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~sl~~vsvs~ 200 (451)
...+++.|+..++.+ |...+ ...+++.+.+.+......+ ....+...+...+..+++ ..+...+.+.++++.+.+.
T Consensus 161 a~~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~ 237 (293)
T PRK10532 161 AIYILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRT 237 (293)
T ss_pred HHHHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhH
Confidence 345566788776665 66554 4445554444433332222 122344444444556665 4467889999999999999
Q ss_pred HHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhh
Q 013023 201 THTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 280 (451)
Q Consensus 201 ~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l 280 (451)
+.++. .++|++..++++++++|+++..++++.+++++|++.
T Consensus 238 as~~~---------------------------------------~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~ 278 (293)
T PRK10532 238 FGTLM---------------------------------------SMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMG 278 (293)
T ss_pred HHHHH---------------------------------------HhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence 98888 899999999999999999999999999999999988
Q ss_pred hcc
Q 013023 281 ASL 283 (451)
Q Consensus 281 ~~~ 283 (451)
...
T Consensus 279 ~~~ 281 (293)
T PRK10532 279 STL 281 (293)
T ss_pred HHh
Confidence 753
No 48
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.96 E-value=0.0076 Score=61.73 Aligned_cols=228 Identities=12% Similarity=0.019 Sum_probs=136.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchh
Q 013023 168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALE 247 (451)
Q Consensus 168 ~~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~ 247 (451)
+.+.+..-+..|++...++.....+++++++|....+.+ .+.
T Consensus 69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~--------------------------------------Gl~ 110 (345)
T PRK13499 69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAI--------------------------------------GIT 110 (345)
T ss_pred CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHH--------------------------------------HHH
Confidence 455666777788888999999999999999999888772 455
Q ss_pred HHHHHHHHHHHhCccc-------ChhHHHHHHHHHHHhhhhcc----ccc---------cccHHHHHHHHHHHHHHHHHH
Q 013023 248 PFFNAAASQFILGQQL-------PLTLWLSLAPVVIGVSMASL----TEL---------SFNWTGFISAMISNISFTYRS 307 (451)
Q Consensus 248 Pvf~~lls~~~l~ek~-------~~~~~lsl~~~~~Gv~l~~~----~~~---------~~~~~G~~l~l~s~l~~al~~ 307 (451)
-++..++..++++|-. .....++++++++|+++.+. +|. .....|++.++++.+.++.++
T Consensus 111 lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 111 LIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred HHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence 6667777777777532 23466889999999999876 432 123679999999999999999
Q ss_pred HHHHhhc--------CCCChHHHHHHHHH---HHHHHHH-HHHHHhhchhhhhcchhhhhhhhc----hHHHHHHHHHHH
Q 013023 308 IYSKKAM--------TDMDSTNIYAYISI---IALFVCI-PPAIIVEGPQLIKHGLSDAISKVG----MVKFISDLFWVG 371 (451)
Q Consensus 308 v~~kk~~--------~~~~~~~l~~~~~~---~s~l~ll-p~al~~e~~~~~~~~~~~~~~~~~----~~~~~~~l~~~g 371 (451)
.....-+ .+.++.....-+.. .+.++.- .+..+.-.. +..++...+... ...-...-.+.|
T Consensus 191 ~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k---~~~~~~~~~~~~~~~~~~~n~l~~~l~G 267 (345)
T PRK13499 191 FAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAK---NKDLSLKADFSLAKPLLITNVLLSALAG 267 (345)
T ss_pred HHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCCcccchhccccchhHHHHHHHHHHHH
Confidence 4332221 23344322222222 2222211 111110000 000100001111 011122234556
Q ss_pred HHHHHHHHHHHHHhhhcChH----HHHHHHHHHHHHHHHHHHHHhCCcCc------hhhHHHHHHHHHHHHHHHhh
Q 013023 372 MFYHLYNQLATNTLERVAPL----THAVGNVLKRVFVIGFSILAFGNKIS------TQTGIGTVIAIAGVAAYSYI 437 (451)
Q Consensus 372 i~~~~~~~~~~~~l~~~s~l----t~sv~~~lk~v~~i~ls~i~fge~ls------~~~iiG~~lii~Gv~ly~~~ 437 (451)
+..+..+......-++.+.. ...+.+-+.-+++.+.++ +++|.=+ ...++|.++++.|..+..+.
T Consensus 268 ~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 268 VMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred HHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 66666665555444555322 222444556678888888 4999766 67789999999998876543
No 49
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.95 E-value=0.00031 Score=70.25 Aligned_cols=130 Identities=18% Similarity=0.138 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHH
Q 013023 291 TGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 370 (451)
Q Consensus 291 ~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 370 (451)
.++++++++.++|+...+..|...+.++|..+.++-..++.++++++. ..+...+ ... ..++..
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~~---------~~~----~~~~~~ 67 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTV---GFPRLRQ---------FPK----RYLLAG 67 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHc---ccccccc---------ccH----HHHHHH
Confidence 356788899999999999999999999999999999988888777652 1121100 001 111222
Q ss_pred HHHHHHHHHHHHHHh----hhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHh
Q 013023 371 GMFYHLYNQLATNTL----ERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 436 (451)
Q Consensus 371 gi~~~~~~~~~~~~l----~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~ 436 (451)
++....++.+.+..+ +..++...++...+.|+++.++++++++|+++..+++|+++.++|+.+-..
T Consensus 68 ~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~ 137 (295)
T PRK11689 68 GLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLG 137 (295)
T ss_pred hHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheec
Confidence 222223333333222 456778888999999999999999999999999999999999999986543
No 50
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.93 E-value=0.0005 Score=68.59 Aligned_cols=129 Identities=16% Similarity=0.166 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHH
Q 013023 294 ISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMF 373 (451)
Q Consensus 294 ~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 373 (451)
.+.++-.+.|+...+..|...++++|..+..+-...++++++++... +.... . .. ..+......|.+
T Consensus 11 ~~~~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~-~~~~~-~-------~~----~~~~~~~~~g~~ 77 (292)
T PRK11272 11 GALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLL-RGHPL-P-------TL----RQWLNAALIGLL 77 (292)
T ss_pred HHHHHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH-hCCCC-C-------cH----HHHHHHHHHHHH
Confidence 45667788999999999988889999999999999999888887553 22111 0 00 112233344444
Q ss_pred HH-HHHHHHHHHh-hhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHh
Q 013023 374 YH-LYNQLATNTL-ERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 436 (451)
Q Consensus 374 ~~-~~~~~~~~~l-~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~ 436 (451)
.. .++.+.+... +.+++...++...+.|+++.+++.+ ++|+++..+++|.++.++|+.+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~ 141 (292)
T PRK11272 78 LLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS 141 (292)
T ss_pred HHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc
Confidence 32 2233334445 7888888999999999999999985 7999999999999999999987653
No 51
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.89 E-value=0.00062 Score=69.93 Aligned_cols=126 Identities=13% Similarity=0.062 Sum_probs=93.4
Q ss_pred HHHHHHHHHHhhcCCCC-hHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHH
Q 013023 302 SFTYRSIYSKKAMTDMD-STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQL 380 (451)
Q Consensus 302 ~~al~~v~~kk~~~~~~-~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~ 380 (451)
+...++++.|..++..+ |+.+..++..++.+++.++... ......+ + . .....+..++..|+++...+..
T Consensus 60 ~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~--~----~--~~~~~~~~llp~gl~~~~~~~~ 130 (350)
T PTZ00343 60 LNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWAT-GFRKIPR--I----K--SLKLFLKNFLPQGLCHLFVHFG 130 (350)
T ss_pred HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCC--C----C--CHHHHHHHHHHHHHHHHHHHHH
Confidence 33455778888888888 9999999999987766554322 1100000 0 0 0112345566667766655555
Q ss_pred HHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHh
Q 013023 381 ATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 436 (451)
Q Consensus 381 ~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~ 436 (451)
.+..++.+++...++...+.|+++++++.++++|+++..++.|.+++++|+.+...
T Consensus 131 ~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 131 AVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 56678999999999999999999999999999999999999999999999997653
No 52
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.88 E-value=0.00041 Score=69.41 Aligned_cols=124 Identities=14% Similarity=0.167 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHH
Q 013023 294 ISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMF 373 (451)
Q Consensus 294 ~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 373 (451)
++.++++++|+...+..|...++++|..+.++-..++++.++++.. .+.. . +..++..|++
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~---~~~~------------~----~~~~~~~g~~ 67 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVA---RPKV------------P----LNLLLGYGLT 67 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc---CCCC------------c----hHHHHHHHHH
Confidence 5678899999999999999888999999999998887766555421 1110 0 0112223333
Q ss_pred HHHHHH-HHHHHhhh-cChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHh
Q 013023 374 YHLYNQ-LATNTLER-VAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 436 (451)
Q Consensus 374 ~~~~~~-~~~~~l~~-~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~ 436 (451)
....+. ..+..+++ .++...++...+.|+++.++++++++|+++..+++|.++.++|+.+-..
T Consensus 68 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~ 132 (299)
T PRK11453 68 ISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE 132 (299)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence 222222 22344455 4667888889999999999999999999999999999999999986653
No 53
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.87 E-value=0.00072 Score=66.78 Aligned_cols=140 Identities=15% Similarity=0.150 Sum_probs=107.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHH
Q 013023 289 NWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLF 368 (451)
Q Consensus 289 ~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~ 368 (451)
+..|+++++.+-+.|++--.+.|-+ ++.++.++..+-.+.+.++++........++... +....+..+....
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~-------~~~~~p~~~~~~~ 76 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-EPLPATEILAHRVIWSFPFMLALLFLLRQWRELK-------QLLKQPKTLLMLA 76 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-------HHHhCcHHHHHHH
Confidence 3469999999999999999888554 8899999999999999988877766554333221 1112223333333
Q ss_pred HHHHHHHHHHHHHH-HHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhh
Q 013023 369 WVGMFYHLYNQLAT-NTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 437 (451)
Q Consensus 369 ~~gi~~~~~~~~~~-~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~ 437 (451)
..++. ...|...| +....-..+..|....+.|.+.++++.++++|+++..|++..+++.+|+..-.+.
T Consensus 77 l~a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 77 LTALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 33333 34566655 7778888999999999999999999999999999999999999999999876544
No 54
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.86 E-value=8.6e-05 Score=74.73 Aligned_cols=68 Identities=22% Similarity=0.340 Sum_probs=58.5
Q ss_pred HHHHH-HHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHH
Q 013023 176 IPVAV-CHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAA 254 (451)
Q Consensus 176 ~~~~l-~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~ll 254 (451)
...|+ ....+..++..++.+.|.+..+-+. ++.-++++++
T Consensus 53 W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg---------------------------------------~~~lv~~~~~ 93 (300)
T PF05653_consen 53 WWIGLLLMVLGEILNFVALGFAPASLVAPLG---------------------------------------ALSLVFNAVL 93 (300)
T ss_pred HHHHHHHHhcchHHHHHHHHhhhHHHHHHHH---------------------------------------hhhhhhHHHH
Confidence 33343 3456778889999999999999888 7888899999
Q ss_pred HHHHhCcccChhHHHHHHHHHHHhhhhc
Q 013023 255 SQFILGQQLPLTLWLSLAPVVIGVSMAS 282 (451)
Q Consensus 255 s~~~l~ek~~~~~~lsl~~~~~Gv~l~~ 282 (451)
+.++++||++++.+.+.+++++|..++.
T Consensus 94 a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 94 ARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred hHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 9999999999999999999999998764
No 55
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.86 E-value=0.00045 Score=59.37 Aligned_cols=65 Identities=15% Similarity=0.228 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHh
Q 013023 180 VCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFIL 259 (451)
Q Consensus 180 l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l 259 (451)
+++.....+...+++.++++.+..+- ++.++++++++++++
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~---------------------------------------~l~~v~~~~~~~l~f 85 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPML---------------------------------------SLNFVWVTLAAVKLW 85 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHH---------------------------------------HHHHHHHHHHHHHHh
Confidence 44566788899999999999998888 789999999999999
Q ss_pred CcccChhHHHHHHHHHHHhhhhcc
Q 013023 260 GQQLPLTLWLSLAPVVIGVSMASL 283 (451)
Q Consensus 260 ~ek~~~~~~lsl~~~~~Gv~l~~~ 283 (451)
|||++++++++++++++|++++..
T Consensus 86 ~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 86 HEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999988754
No 56
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.78 E-value=0.00064 Score=60.04 Aligned_cols=120 Identities=14% Similarity=0.050 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHH
Q 013023 291 TGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 370 (451)
Q Consensus 291 ~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 370 (451)
.|+++.+++.++.+..+++.|+-+++....+.... . ...+ ... .+ | ....+..++..
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~-~~~~----~~~-~~-p---------------~~~i~lgl~~~ 58 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-F-IAAL----LAF-GL-A---------------LRAVLLGLAGY 58 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-H-HHHH----HHH-hc-c---------------HHHHHHHHHHH
Confidence 37888999999999999999998876544332111 0 0000 000 00 0 00112222223
Q ss_pred HHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHH--HhCCcCchhhHHHHHHHHHHHHHHHhh
Q 013023 371 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIL--AFGNKISTQTGIGTVIAIAGVAAYSYI 437 (451)
Q Consensus 371 gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i--~fge~ls~~~iiG~~lii~Gv~ly~~~ 437 (451)
++..... ...+++.+.....-......+.+.+.++. +|||++|..+++|.+++++|+++.+..
T Consensus 59 ~la~~~w----~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 59 ALSMLCW----LKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHH----HHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 3322222 34568888777766666666777777774 899999999999999999999987643
No 57
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.71 E-value=0.0012 Score=65.94 Aligned_cols=120 Identities=17% Similarity=0.176 Sum_probs=86.2
Q ss_pred HHHHHHHhhcCC-CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHH
Q 013023 305 YRSIYSKKAMTD-MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATN 383 (451)
Q Consensus 305 l~~v~~kk~~~~-~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~ 383 (451)
..+++.|..+++ ..|..+..+...++.+.+.+... .......+ .. ...+..++..|++........+.
T Consensus 16 ~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------~~-~~~~~~~~~~g~~~~~~~~~~~~ 84 (302)
T TIGR00817 16 YFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLK---------IS-SALLKLLLPVAIVHTIGHVTSNV 84 (302)
T ss_pred HHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCC---------CC-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 344667888877 56778888877777665544311 11110000 01 11244556666666666666678
Q ss_pred HhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHH
Q 013023 384 TLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 435 (451)
Q Consensus 384 ~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~ 435 (451)
.++.+++...++...+.|+++.+++.++++|+++..++.|.+++++|+.+..
T Consensus 85 ~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 85 SLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 8899999999999999999999999999999999999999999999997643
No 58
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.45 E-value=0.0045 Score=52.94 Aligned_cols=72 Identities=18% Similarity=0.202 Sum_probs=55.4
Q ss_pred HHHHHHHHH-HHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhhh
Q 013023 367 LFWVGMFYH-LYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 439 (451)
Q Consensus 367 l~~~gi~~~-~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~~ 439 (451)
.++.|++.. ..+...+..++..++ ..+....+.|+++.+++.++|+|+++..+++|.+++++|+.+..+.+.
T Consensus 37 ~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 37 LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 334444443 333333455677775 667888899999999999999999999999999999999998776544
No 59
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.37 E-value=0.0026 Score=63.63 Aligned_cols=132 Identities=13% Similarity=0.078 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHH
Q 013023 292 GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 371 (451)
Q Consensus 292 G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 371 (451)
|++++++++++|+..-+..|+.. +.++.+.. -..++.+++.........+.. .....+..-+..|
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~------------~~~~~~~~g~l~G 66 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-GGPYSQTL--GTTFGALILSIAIAIFVLPEF------------WALSIFLVGLLSG 66 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCcc------------cccHHHHHHHHHH
Confidence 67889999999999999999876 56665554 233344433333332221111 1123344456677
Q ss_pred HHHHHHHHHHHHHhhhcChHHHHHHHH-HHHHHHHHHHHHHhCCcCchhh----HHHHHHHHHHHHHHHhhh
Q 013023 372 MFYHLYNQLATNTLERVAPLTHAVGNV-LKRVFVIGFSILAFGNKISTQT----GIGTVIAIAGVAAYSYIK 438 (451)
Q Consensus 372 i~~~~~~~~~~~~l~~~s~lt~sv~~~-lk~v~~i~ls~i~fge~ls~~~----iiG~~lii~Gv~ly~~~~ 438 (451)
+.....|...+..+++.+....-...+ +..+++.+++.++|||+.+..+ ++|.++++.|+++....+
T Consensus 67 ~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~ 138 (290)
T TIGR00776 67 AFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK 138 (290)
T ss_pred HHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence 777777788888888888777755444 7888999999999999999999 999999999998876554
No 60
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.25 E-value=0.019 Score=55.73 Aligned_cols=119 Identities=28% Similarity=0.386 Sum_probs=85.5
Q ss_pred HHHHHHHHHHccCCcHHHHHH-HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHhhhchhHhH
Q 013023 123 IFNILNKRIYNYFPYPYFVSV-IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSF 200 (451)
Q Consensus 123 ~~~i~nK~ll~~f~~P~~lt~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~sl~~vsvs~ 200 (451)
...+.+|++. +.+ +..... +++.....+...... ..+. .+.+...+......+++.. .+..+.+.+++..+++.
T Consensus 168 ~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~ 243 (292)
T COG0697 168 LYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFL-SGFG-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASL 243 (292)
T ss_pred HHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHh-cccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH
Confidence 4567777776 333 444444 455422222222222 1121 3445566777777787766 48889999999999998
Q ss_pred HHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhh
Q 013023 201 THTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 280 (451)
Q Consensus 201 ~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l 280 (451)
...+. .++|++..++++++++|+++..++++.++++.|+.+
T Consensus 244 ~~~~~---------------------------------------~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l 284 (292)
T COG0697 244 VALLS---------------------------------------LLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLL 284 (292)
T ss_pred HHHHH---------------------------------------HHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence 88887 799999999999999999999999999999999998
Q ss_pred hccc
Q 013023 281 ASLT 284 (451)
Q Consensus 281 ~~~~ 284 (451)
....
T Consensus 285 ~~~~ 288 (292)
T COG0697 285 ASLR 288 (292)
T ss_pred Hhcc
Confidence 7654
No 61
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.25 E-value=0.014 Score=51.79 Aligned_cols=125 Identities=14% Similarity=0.158 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHcc------CCcHHHHHHHHHHHHHHHHHHHH-HhCCCCCCC---------C--CHHHHHHHHHHHH
Q 013023 119 FLNVIFNILNKRIYNY------FPYPYFVSVIHLLVGVVYCLVSW-AVGLPKRAP---------I--DSKLLKLLIPVAV 180 (451)
Q Consensus 119 ~~~~~~~i~nK~ll~~------f~~P~~lt~~~~~~~~l~~~~~~-~~~~~~~~~---------~--~~~~~~~~~~~~l 180 (451)
.+....+++.|+++++ -..|+.+.......+.+++.+.+ ..+.++..+ . +.+.+..++..++
T Consensus 10 ~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
T PF03151_consen 10 LFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGL 89 (153)
T ss_pred HHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHH
Confidence 3445555777887765 22577777777777766665543 333322110 0 2344555666667
Q ss_pred HHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhC
Q 013023 181 CHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILG 260 (451)
Q Consensus 181 ~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ 260 (451)
+....+......+++++.-.++++. ..-.+.+.+++.++++
T Consensus 90 ~~~~~n~~~f~~i~~tS~lt~~v~~---------------------------------------~~K~~~~i~~s~~~f~ 130 (153)
T PF03151_consen 90 LAFLYNLSSFLLIKLTSPLTYSVLG---------------------------------------NVKRILVILLSVIFFG 130 (153)
T ss_pred HHHHHHHHHHHHhhhcChhHHHHHH---------------------------------------HHHHHHHHHHHhhhcC
Confidence 7777788888888999988888888 7788889999999999
Q ss_pred cccChhHHHHHHHHHHHhhhhc
Q 013023 261 QQLPLTLWLSLAPVVIGVSMAS 282 (451)
Q Consensus 261 ek~~~~~~lsl~~~~~Gv~l~~ 282 (451)
|+++..++.++++.++|+.+-+
T Consensus 131 ~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 131 EPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred CcCCHHHHHHHHHHHHHHheee
Confidence 9999999999999999998653
No 62
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.93 E-value=0.0094 Score=59.82 Aligned_cols=126 Identities=15% Similarity=0.137 Sum_probs=90.4
Q ss_pred HHHHHHHHHhhcCC--C--ChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHH
Q 013023 303 FTYRSIYSKKAMTD--M--DSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYN 378 (451)
Q Consensus 303 ~al~~v~~kk~~~~--~--~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~ 378 (451)
+..+.+++++..++ . .+..+++.+.....+...+.......++. .. ..+......+++..+.+
T Consensus 12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~---------~~----~~~~~~~~~~~~~~~~~ 78 (303)
T PF08449_consen 12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKS---------RK----IPLKKYAILSFLFFLAS 78 (303)
T ss_pred HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCC---------Cc----ChHHHHHHHHHHHHHHH
Confidence 34455667777643 2 36677777777777666555443221111 00 11223345556666666
Q ss_pred HHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhhhhH
Q 013023 379 QLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQM 441 (451)
Q Consensus 379 ~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~~~~ 441 (451)
......++.++..++.+.-..|++.+++++.+++|++.+..++.+.+++.+|+.+....+.+.
T Consensus 79 ~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~ 141 (303)
T PF08449_consen 79 VLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSS 141 (303)
T ss_pred HHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccc
Confidence 777778899999999999999999999999999999999999999999999999988766543
No 63
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=96.87 E-value=0.012 Score=50.47 Aligned_cols=53 Identities=17% Similarity=0.115 Sum_probs=46.1
Q ss_pred HHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHH
Q 013023 383 NTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 435 (451)
Q Consensus 383 ~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~ 435 (451)
..+++.+.........+.++.+.++|+++|||+++..+++|.+++++|+.+-.
T Consensus 56 ~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 56 LVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 45678887777666669999999999999999999999999999999998653
No 64
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=96.75 E-value=0.0096 Score=52.59 Aligned_cols=67 Identities=16% Similarity=0.140 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHH--
Q 013023 180 VCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQF-- 257 (451)
Q Consensus 180 l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~-- 257 (451)
+++.+...+.+.+++..+++.+..+- +..++++.+.++.
T Consensus 56 ~~~~la~~~w~~aL~~~~ls~Ayp~~---------------------------------------sl~~~~v~~~~~~~~ 96 (129)
T PRK02971 56 AGYALSMLCWLKALRYLPLSRAYPLL---------------------------------------SLSYALVYLAAMLLP 96 (129)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHH---------------------------------------HHHHHHHHHHHHHHH
Confidence 45667888999999999999888776 6777778888875
Q ss_pred HhCcccChhHHHHHHHHHHHhhhhcccc
Q 013023 258 ILGQQLPLTLWLSLAPVVIGVSMASLTE 285 (451)
Q Consensus 258 ~l~ek~~~~~~lsl~~~~~Gv~l~~~~~ 285 (451)
+++|++++.++++++++++|+.++..++
T Consensus 97 ~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 97 WFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 8999999999999999999999987543
No 65
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.69 E-value=0.003 Score=63.19 Aligned_cols=203 Identities=20% Similarity=0.195 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhC
Q 013023 181 CHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILG 260 (451)
Q Consensus 181 ~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ 260 (451)
....+-..+..++.+.|.+..+.+. ++.-+..++++.++++
T Consensus 73 tm~vGei~NFaAYaFAPasLVtPLG---------------------------------------Alsvi~saila~~~L~ 113 (335)
T KOG2922|consen 73 TMIVGEIANFAAYAFAPASLVTPLG---------------------------------------ALSVIISAILASFFLK 113 (335)
T ss_pred HHHHHhHhhHHHHhhchHhhhccch---------------------------------------hHHHHHHHHHHHHHHH
Confidence 3556788888999999999999888 8888899999999999
Q ss_pred cccChhHHHHHHHHHHHhhhhccccccc----c---------HHHHHH-HHHHHHHHHHHHHHHHhhcCCCChHHHHHHH
Q 013023 261 QQLPLTLWLSLAPVVIGVSMASLTELSF----N---------WTGFIS-AMISNISFTYRSIYSKKAMTDMDSTNIYAYI 326 (451)
Q Consensus 261 ek~~~~~~lsl~~~~~Gv~l~~~~~~~~----~---------~~G~~l-~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~ 326 (451)
||+++.-.++.+++++|-.+++...... + -++++. ..+-.+...+-....|+ +....+++.|.
T Consensus 114 Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~~~il~~~~~p---~~g~tnilvyi 190 (335)
T KOG2922|consen 114 EKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILIVLILIFFYAP---RYGQTNILVYI 190 (335)
T ss_pred HHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHHHHHHheeecc---cccccceeehh
Confidence 9999999999999999998875432110 0 122211 11111111111111221 12233455565
Q ss_pred HHHHHHHHHHH--------H--HHhh-chhhhhcchhhhhhhhchHHHHHHHHHHHHH-HHHHHHHHHHHhhhcC-hHHH
Q 013023 327 SIIALFVCIPP--------A--IIVE-GPQLIKHGLSDAISKVGMVKFISDLFWVGMF-YHLYNQLATNTLERVA-PLTH 393 (451)
Q Consensus 327 ~~~s~l~llp~--------a--l~~e-~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~-~~~~~~~~~~~l~~~s-~lt~ 393 (451)
.+.+.+-.+-. + ...+ .++. ..+..|..++....+ .+-+++. .+.++... .+..
T Consensus 191 ~i~s~iGS~tV~svKalg~aiklt~~g~~ql------------~~~~ty~~~l~~~~~~~~Q~~yL-NkAL~~fntslV~ 257 (335)
T KOG2922|consen 191 GICSLIGSLTVMSVKALGIAIKLTFSGNNQL------------FYPLTWIFLLVVATCVSTQMNYL-NKALDLFNTSIVS 257 (335)
T ss_pred hHhhhhcceeeeeHHHHHHHHHHHhcCCccc------------ccHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhhhcc
Confidence 55544421111 0 0111 1111 112233333222222 2222222 23334333 3334
Q ss_pred HHHHHHHHHHHHHHHHHHhCCc--Cch----hhHHHHHHHHHHHHHHHhhh
Q 013023 394 AVGNVLKRVFVIGFSILAFGNK--IST----QTGIGTVIAIAGVAAYSYIK 438 (451)
Q Consensus 394 sv~~~lk~v~~i~ls~i~fge~--ls~----~~iiG~~lii~Gv~ly~~~~ 438 (451)
.+..++-..++++.|.++|.|- .+. ..+.|...++.|+++-+..|
T Consensus 258 PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~k 308 (335)
T KOG2922|consen 258 PIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTK 308 (335)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeec
Confidence 5566677788999999999884 444 34567778888888765443
No 66
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.68 E-value=0.00041 Score=66.89 Aligned_cols=215 Identities=14% Similarity=0.134 Sum_probs=145.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccch
Q 013023 167 IDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSAL 246 (451)
Q Consensus 167 ~~~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l 246 (451)
.+...+..-+.-|++...++....-++++.++|-+.-+.+ .+
T Consensus 54 ~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiSt--------------------------------------G~ 95 (288)
T COG4975 54 LTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPIST--------------------------------------GM 95 (288)
T ss_pred cchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccc--------------------------------------hh
Confidence 3445555566667777788888899999999998877773 56
Q ss_pred hHHHHHHHHHHHhCcccChhHH----HHHHHHHHHhhhhcccccc--------ccHHHHHHHHHHHHHHHHHHHHHHhhc
Q 013023 247 EPFFNAAASQFILGQQLPLTLW----LSLAPVVIGVSMASLTELS--------FNWTGFISAMISNISFTYRSIYSKKAM 314 (451)
Q Consensus 247 ~Pvf~~lls~~~l~ek~~~~~~----lsl~~~~~Gv~l~~~~~~~--------~~~~G~~l~l~s~l~~al~~v~~kk~~ 314 (451)
.-+-+.+++.+.++|-.+..+. .+++++++|+.+-++.|.+ +--.|+...+.|.+.|..|-++.+..
T Consensus 96 QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f- 174 (288)
T COG4975 96 QLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF- 174 (288)
T ss_pred hHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc-
Confidence 6677888899999997666554 6788889999999877631 11358888889999999999888766
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHH
Q 013023 315 TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHA 394 (451)
Q Consensus 315 ~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~s 394 (451)
+.|.++...-+.+-+.+..+.+....+.+...+ ....-...|+.....|...+..-++.+..|.=
T Consensus 175 -~v~g~saiLPqAiGMv~~ali~~~~~~~~~~~K--------------~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~F 239 (288)
T COG4975 175 -DVDGLSAILPQAIGMVIGALILGFFKMEKRFNK--------------YTWLNIIPGLIWAIGNLFMLLAAQKVGVATSF 239 (288)
T ss_pred -cccchhhhhHHHHHHHHHHHHHhhcccccchHH--------------HHHHHHhhHHHHHhhHHHHHHhhhhhceeeee
Confidence 467776666665544444444433322222211 11223456666666676666555666555443
Q ss_pred HHHHHHHHHHHHHHHHHhCCcCchhhH----HHHHHHHHHHHHHH
Q 013023 395 VGNVLKRVFVIGFSILAFGNKISTQTG----IGTVIAIAGVAAYS 435 (451)
Q Consensus 395 v~~~lk~v~~i~ls~i~fge~ls~~~i----iG~~lii~Gv~ly~ 435 (451)
...-+--+++.+-++++++|+=|..++ +|.++++.|..+..
T Consensus 240 SlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg 284 (288)
T COG4975 240 SLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG 284 (288)
T ss_pred eHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence 344456677888899999999887664 56777777665543
No 67
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.61 E-value=0.006 Score=59.65 Aligned_cols=77 Identities=23% Similarity=0.287 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhhhh
Q 013023 364 ISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 440 (451)
Q Consensus 364 ~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~~~ 440 (451)
.......++++.+.|...|..++..+|.+..+....|.+++.++++++++.+++..||++..+.++|+.+.......
T Consensus 17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 34566788999999999999999999999999999999999999999999999999999999999999987665544
No 68
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.46 E-value=0.088 Score=54.04 Aligned_cols=140 Identities=16% Similarity=0.110 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHH--HHHHHHH-HhhchhhhhcchhhhhhhhchHHHHHH
Q 013023 290 WTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALF--VCIPPAI-IVEGPQLIKHGLSDAISKVGMVKFISD 366 (451)
Q Consensus 290 ~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l--~llp~al-~~e~~~~~~~~~~~~~~~~~~~~~~~~ 366 (451)
..|+++++++.+|++-..+-+||. ++.+ ++.+ |. ..+.+ ++.|+.. ....+.+ .+.+.... ...+..
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~~-k~w~-wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f-----~~~~~~~~-~~~~~~ 75 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKKV-KKWS-WETM-WS-VGGIFSWLILPWLIAALLLPDF-----WAYYSSFS-GSTLLP 75 (345)
T ss_pred HHHHHHHHHHHHHhhccccccccc-CCCc-hhHH-HH-HHHHHHHHHHHHHHHHHHhhhH-----HHHHHhcC-HHHHHH
Confidence 579999999999999999999883 4433 3333 32 11111 1222111 1111222 11122122 244556
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCh-HHHHHHHHHHHHHHHHHHHHHhCCcC-------chhhHHHHHHHHHHHHHHHhhh
Q 013023 367 LFWVGMFYHLYNQLATNTLERVAP-LTHAVGNVLKRVFVIGFSILAFGNKI-------STQTGIGTVIAIAGVAAYSYIK 438 (451)
Q Consensus 367 l~~~gi~~~~~~~~~~~~l~~~s~-lt~sv~~~lk~v~~i~ls~i~fge~l-------s~~~iiG~~lii~Gv~ly~~~~ 438 (451)
-++.|++....|...+..+++.+. .+..+..-+.-+...+++.+++||-- .....+|.++++.|+.+..+..
T Consensus 76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag 155 (345)
T PRK13499 76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG 155 (345)
T ss_pred HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 677888888888877777777764 44566667788899999999998642 2457789999999999988743
Q ss_pred h
Q 013023 439 A 439 (451)
Q Consensus 439 ~ 439 (451)
.
T Consensus 156 ~ 156 (345)
T PRK13499 156 Q 156 (345)
T ss_pred h
Confidence 3
No 69
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.40 E-value=0.033 Score=48.56 Aligned_cols=72 Identities=15% Similarity=0.213 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHH
Q 013023 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAA 254 (451)
Q Consensus 175 ~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~ll 254 (451)
....-++++...++...++++++++.+..+-+ ...-+.+.++
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~--------------------------------------GiG~v~~~~i 74 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWE--------------------------------------GIGILFITLF 74 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHH--------------------------------------HHHHHHHHHH
Confidence 34455566777888889999999988766631 5667788999
Q ss_pred HHHHhCcccChhHHHHHHHHHHHhhhhccc
Q 013023 255 SQFILGQQLPLTLWLSLAPVVIGVSMASLT 284 (451)
Q Consensus 255 s~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~ 284 (451)
+.++++|++++.+++++.++++|++.+...
T Consensus 75 g~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 75 SVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999988543
No 70
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.35 E-value=0.042 Score=46.81 Aligned_cols=70 Identities=17% Similarity=0.152 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHH
Q 013023 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAAS 255 (451)
Q Consensus 176 ~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls 255 (451)
+..-+++.....+-..+++.++++.+..+= . ...-+.+.+.+
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW----~----------------------------------GiG~v~~~lig 74 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVW----T----------------------------------GIGAVGAAITG 74 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHH----H----------------------------------HHHHHHHHHHH
Confidence 344555667778888889999998876664 1 56677889999
Q ss_pred HHHhCcccChhHHHHHHHHHHHhhhhcc
Q 013023 256 QFILGQQLPLTLWLSLAPVVIGVSMASL 283 (451)
Q Consensus 256 ~~~l~ek~~~~~~lsl~~~~~Gv~l~~~ 283 (451)
+++++|++++.+++++.++++|++.+..
T Consensus 75 ~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 75 IVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999998754
No 71
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.19 E-value=0.082 Score=45.32 Aligned_cols=70 Identities=16% Similarity=0.173 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHH
Q 013023 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAA 254 (451)
Q Consensus 175 ~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~ll 254 (451)
....-+++.....+-..+++.++++.+..+= . ...-+.+.+.
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW----~----------------------------------GiG~v~~~~i 79 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALW----G----------------------------------GFGIAATLAA 79 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHH----H----------------------------------HHHHHHHHHH
Confidence 3344455566777888889999998876664 1 5666778999
Q ss_pred HHHHhCcccChhHHHHHHHHHHHhhhhc
Q 013023 255 SQFILGQQLPLTLWLSLAPVVIGVSMAS 282 (451)
Q Consensus 255 s~~~l~ek~~~~~~lsl~~~~~Gv~l~~ 282 (451)
+.++++|++++.+++++.++++|++.+.
T Consensus 80 g~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 80 GWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998763
No 72
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.19 E-value=0.052 Score=46.61 Aligned_cols=69 Identities=16% Similarity=0.189 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHH
Q 013023 178 VAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQF 257 (451)
Q Consensus 178 ~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~ 257 (451)
.-+++.....+...+++.++++.+..+-+ ...-+.+.+.+++
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~--------------------------------------GlG~v~~~l~g~~ 77 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWS--------------------------------------GVGIVLISLLSWG 77 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHH--------------------------------------HHHHHHHHHHHHH
Confidence 34455566777788899999988877751 4566778999999
Q ss_pred HhCcccChhHHHHHHHHHHHhhhhccc
Q 013023 258 ILGQQLPLTLWLSLAPVVIGVSMASLT 284 (451)
Q Consensus 258 ~l~ek~~~~~~lsl~~~~~Gv~l~~~~ 284 (451)
+++|++++.+++++.++++|++++...
T Consensus 78 ~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 78 FFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999988653
No 73
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.13 E-value=0.15 Score=52.19 Aligned_cols=68 Identities=18% Similarity=0.135 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhh
Q 013023 370 VGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 437 (451)
Q Consensus 370 ~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~ 437 (451)
.|++-...|+......++++.....+.....-++++++|+++++++.+..+++|++++++|+.+....
T Consensus 85 la~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s 152 (334)
T PF06027_consen 85 LALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS 152 (334)
T ss_pred HHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence 46788888888888899999999999999999999999999999999999999999999999876544
No 74
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.12 E-value=0.039 Score=46.91 Aligned_cols=71 Identities=20% Similarity=0.219 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHH
Q 013023 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAAS 255 (451)
Q Consensus 176 ~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls 255 (451)
+..-+++.....+-..++++++++.+..+= + ...-+.+++.+
T Consensus 34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW----~----------------------------------GiG~v~~~l~g 75 (106)
T COG2076 34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIW----T----------------------------------GIGIVGTALVG 75 (106)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHH----H----------------------------------HHHHHHHHHHH
Confidence 334445556677888899999998876654 2 56778899999
Q ss_pred HHHhCcccChhHHHHHHHHHHHhhhhccc
Q 013023 256 QFILGQQLPLTLWLSLAPVVIGVSMASLT 284 (451)
Q Consensus 256 ~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~ 284 (451)
+++++|+++..+++++.++++|++.....
T Consensus 76 ~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 76 VLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999987543
No 75
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.08 E-value=0.22 Score=44.44 Aligned_cols=130 Identities=12% Similarity=0.152 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCC-hHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHH
Q 013023 293 FISAMISNISFTYRSIYSKKAMTDMD-STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 371 (451)
Q Consensus 293 ~~l~l~s~l~~al~~v~~kk~~~~~~-~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 371 (451)
.++++++...-++...+..++.++.+ |+.-.......+.+.+..+.++.+.+.... .....+ | ....|
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~------~~~~p~---w--~~lGG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLAS------LSSVPW---W--AYLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccch------hccCCh---H--HhccH
Confidence 46778888888888888888877765 888888888888888888777766542211 111111 2 22366
Q ss_pred HHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHH-HHHHHH-Hh---CCcCchhhHHHHHHHHHHHHH
Q 013023 372 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFV-IGFSIL-AF---GNKISTQTGIGTVIAIAGVAA 433 (451)
Q Consensus 372 i~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~-i~ls~i-~f---ge~ls~~~iiG~~lii~Gv~l 433 (451)
+++..+.......+.+.++....+....-.++. ++++.+ .| +++++..+++|.++++.|+.+
T Consensus 72 ~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 72 LLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 777666666667789999888877666555544 444554 33 357999999999999999863
No 76
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=95.88 E-value=0.047 Score=47.61 Aligned_cols=54 Identities=20% Similarity=0.276 Sum_probs=43.6
Q ss_pred hhhcCh-HHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhh
Q 013023 385 LERVAP-LTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 438 (451)
Q Consensus 385 l~~~s~-lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~ 438 (451)
+++.+. +.+++..-+--+.+.+.++++|||++|..+++|++++++|+..-+...
T Consensus 51 l~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 51 VKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 455543 344665567888899999999999999999999999999998876544
No 77
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=95.86 E-value=0.35 Score=41.51 Aligned_cols=51 Identities=16% Similarity=0.269 Sum_probs=43.6
Q ss_pred hhhcCh-HHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHH
Q 013023 385 LERVAP-LTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 435 (451)
Q Consensus 385 l~~~s~-lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~ 435 (451)
+++.+. +.+++-.-+-.+.+.+.++++|||+++..+++|+++++.|+..-+
T Consensus 56 l~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 56 VKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 466654 455787888889999999999999999999999999999998643
No 78
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=95.72 E-value=0.24 Score=48.47 Aligned_cols=122 Identities=22% Similarity=0.235 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHhhhchh
Q 013023 119 FLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVA 197 (451)
Q Consensus 119 ~~~~~~~i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~sl~~vs 197 (451)
.+..++.+..|++-..-+-+ .-...-+.+++++.++....... ..-.++...-.-+.++++.. +-..+..+++...+
T Consensus 158 ~~Wa~YIv~G~r~g~~~~g~-~g~a~gm~vAaviv~Pig~~~ag-~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp 235 (292)
T COG5006 158 ACWALYIVLGQRAGRAEHGT-AGVAVGMLVAALIVLPIGAAQAG-PALFSPSLLPLALGVAVLSSALPYSLEMIALRRLP 235 (292)
T ss_pred HHHHHHHHHcchhcccCCCc-hHHHHHHHHHHHHHhhhhhhhcc-hhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCC
Confidence 34466777778776544423 33445666666655544431111 11123444444444555433 45667788888888
Q ss_pred HhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHHHHHH
Q 013023 198 VSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 277 (451)
Q Consensus 198 vs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~G 277 (451)
.+.+.++- ++||.+.++.+.++++|.++..+|++++.++.+
T Consensus 236 ~~~F~~Ll---------------------------------------SLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaA 276 (292)
T COG5006 236 ARTFGTLL---------------------------------------SLEPALAALSGLIFLGETLTLIQWLAIAAVIAA 276 (292)
T ss_pred hhHHHHHH---------------------------------------HhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 87777776 899999999999999999999999999998887
Q ss_pred hhhh
Q 013023 278 VSMA 281 (451)
Q Consensus 278 v~l~ 281 (451)
.+=.
T Consensus 277 saG~ 280 (292)
T COG5006 277 SAGS 280 (292)
T ss_pred Hhcc
Confidence 7633
No 79
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=95.35 E-value=0.18 Score=43.25 Aligned_cols=55 Identities=22% Similarity=0.284 Sum_probs=44.4
Q ss_pred HhhhcCh-HHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhh
Q 013023 384 TLERVAP-LTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 438 (451)
Q Consensus 384 ~l~~~s~-lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~ 438 (451)
.+++.+. ..+++-.-+..+.+.+.++++|||+++..+++|+++++.|+..-+...
T Consensus 50 al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 50 TLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 3466553 344666667888899999999999999999999999999999876543
No 80
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=95.27 E-value=0.32 Score=41.47 Aligned_cols=53 Identities=21% Similarity=0.231 Sum_probs=45.0
Q ss_pred hhhcCh-HHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhh
Q 013023 385 LERVAP-LTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 437 (451)
Q Consensus 385 l~~~s~-lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~ 437 (451)
+++.+- +.+++-.-+-.+.+.+.++++|||+++..+++|..++++|+..-+..
T Consensus 51 lk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 51 LKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 466653 45588888889999999999999999999999999999999876643
No 81
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.15 E-value=0.67 Score=41.32 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=79.0
Q ss_pred HHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHHh
Q 013023 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLP-KRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI 204 (451)
Q Consensus 126 i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~i 204 (451)
..|-.+-++...|+.-+++.+.++.+.+.+.+....+ +........|+ ...-|++......+.++....++++.+..+
T Consensus 18 ~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l 96 (138)
T PF04657_consen 18 AFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLGVFFVLSNIILVPRLGAALTTIL 96 (138)
T ss_pred HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 4555555555569999999999998777655543222 22222222233 333677777788888889999888877766
Q ss_pred hhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHH----HhCcccChhHHHHHHHHHHHhhh
Q 013023 205 KGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQF----ILGQQLPLTLWLSLAPVVIGVSM 280 (451)
Q Consensus 205 k~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~----~l~ek~~~~~~lsl~~~~~Gv~l 280 (451)
.. .-+-+...++..+ .-+++++++++++++++++|+.+
T Consensus 97 ~~--------------------------------------~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 97 IV--------------------------------------AGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HH--------------------------------------HHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 51 3444556666665 35678999999999999999864
No 82
>PRK11431 multidrug efflux system protein; Provisional
Probab=94.94 E-value=0.27 Score=41.82 Aligned_cols=52 Identities=15% Similarity=0.146 Sum_probs=44.6
Q ss_pred hhhcCh-HHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHh
Q 013023 385 LERVAP-LTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 436 (451)
Q Consensus 385 l~~~s~-lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~ 436 (451)
+++.+. +.+++-.-+-.+.+.+.++++|||+++..+++|+.+++.|+..-+.
T Consensus 50 l~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 50 MKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 466654 5568888888999999999999999999999999999999987643
No 83
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=94.57 E-value=1.7 Score=44.42 Aligned_cols=116 Identities=24% Similarity=0.242 Sum_probs=84.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhch---hhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHH
Q 013023 317 MDSTNIYAYISIIALFVCIPPAIIVEGP---QLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTH 393 (451)
Q Consensus 317 ~~~~~l~~~~~~~s~l~llp~al~~e~~---~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~ 393 (451)
+.|.+..+..=++-.++++...+..+.. ...+ +....+- ..+.-...+...+.++.+.|...|..++..+|.++
T Consensus 45 f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~-~l~~~i~--~~~~~~lk~~vPa~iYalqNnl~yval~~ldaaty 121 (345)
T KOG2234|consen 45 FLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLK-SLSKEIL--AAPRETLKVSVPALIYALQNNLQYVALSNLDAATY 121 (345)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhh-hcCHHHH--hChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhh
Confidence 5566666666666667766665544322 1111 1111110 11111344566778888889888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHH
Q 013023 394 AVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 435 (451)
Q Consensus 394 sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~ 435 (451)
.+...+|-..+.++++++++++++..||...++.++|+....
T Consensus 122 qVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 122 QVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998876
No 84
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=94.22 E-value=0.06 Score=52.93 Aligned_cols=132 Identities=15% Similarity=0.144 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHH
Q 013023 292 GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 371 (451)
Q Consensus 292 G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 371 (451)
|++.+++|.++++-.-+=.||.- .-|++-.+.+++....+..+...++.+.+.+. ...++.|
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~-~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f~-----------------p~amlgG 62 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD-TGDGFFFQWVMCSGIFLVGLVVNLILGFPPFY-----------------PWAMLGG 62 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc-CCCcHHHHHHHHHHHHHHHHHHHHhcCCCcce-----------------eHHHhhh
Confidence 56788899999998888888764 45777777776666555555555544444331 1233455
Q ss_pred HHHHHHHHHHHHHhhhcCh-HHHHHHHHHHHHHHHHHHHH-HhCCc-----CchhhHHHHHHHHHHHHHHHhhhhhH
Q 013023 372 MFYHLYNQLATNTLERVAP-LTHAVGNVLKRVFVIGFSIL-AFGNK-----ISTQTGIGTVIAIAGVAAYSYIKAQM 441 (451)
Q Consensus 372 i~~~~~~~~~~~~l~~~s~-lt~sv~~~lk~v~~i~ls~i-~fge~-----ls~~~iiG~~lii~Gv~ly~~~~~~~ 441 (451)
.+....|.+..-.++.++- +-..+-+...-+..-..+-+ +||.+ -...+.+|.++++.|..+|...|...
T Consensus 63 ~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 63 ALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 5555555555444444432 11122222222333333322 56543 46789999999999999998877655
No 85
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=94.18 E-value=0.3 Score=40.41 Aligned_cols=57 Identities=18% Similarity=0.285 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHh
Q 013023 180 VCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFIL 259 (451)
Q Consensus 180 l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l 259 (451)
.+++.+..+...++++++++.+..+-+ .+..+.+.+.+.+++
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~--------------------------------------g~g~v~~~~~~~~~f 78 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWT--------------------------------------GLGIVGVTLVGVFFF 78 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHH--------------------------------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHH--------------------------------------HHHHHHHHHHHHHHh
Confidence 366677888999999999988765541 577888999999999
Q ss_pred CcccChhHHHHHHHH
Q 013023 260 GQQLPLTLWLSLAPV 274 (451)
Q Consensus 260 ~ek~~~~~~lsl~~~ 274 (451)
+|++++.++.++.++
T Consensus 79 ~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 79 GESLSLSKWLGIGLI 93 (93)
T ss_dssp --------HHHHHHH
T ss_pred CCCCCHHHHhheeeC
Confidence 999999999998764
No 86
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=93.78 E-value=0.62 Score=44.36 Aligned_cols=66 Identities=14% Similarity=0.116 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHH
Q 013023 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAAS 255 (451)
Q Consensus 176 ~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls 255 (451)
....++.+.+..+..+.+++.+.....++. .+.++++.+++
T Consensus 156 ~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~---------------------------------------~~~~~~s~lls 196 (222)
T TIGR00803 156 WIVGLLNVGGGLCIGGVVRYADNTTKSFVT---------------------------------------ALSIILSTLAS 196 (222)
T ss_pred HHHHHHHHhcCceeeehhHHhHHHHHHHHH---------------------------------------HHHHHHHHHHH
Confidence 334455556666677777887776665555 78999999999
Q ss_pred HHHhCcccChhHHHHHHHHHHHhhh
Q 013023 256 QFILGQQLPLTLWLSLAPVVIGVSM 280 (451)
Q Consensus 256 ~~~l~ek~~~~~~lsl~~~~~Gv~l 280 (451)
.++++++++..++++..+++.|+.+
T Consensus 197 ~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 197 VRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHhcCCccHHHHHHHHHHHeeeEe
Confidence 9999999999999999999988754
No 87
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=93.59 E-value=0.57 Score=47.28 Aligned_cols=119 Identities=18% Similarity=0.160 Sum_probs=75.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHH
Q 013023 288 FNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDL 367 (451)
Q Consensus 288 ~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l 367 (451)
....|..+++.++++.+....++||...+.+....-.-. ++... ...+.+|..+
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~---------------~~~~~-----------l~~~~W~~G~ 57 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGS---------------GGRSY-----------LRRPLWWIGL 57 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc---------------hhhHH-----------HhhHHHHHHH
Confidence 346899999999999999999999875432220000000 00000 0001111212
Q ss_pred HHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHh
Q 013023 368 FWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 436 (451)
Q Consensus 368 ~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~ 436 (451)
+.. ..+...|..+ +...+....+-.+.+.-++..+++.++++|+++...++|.++++.|..+...
T Consensus 58 ~~~-~~g~~~~~~A---l~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 58 LLM-VLGEILNFVA---LGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred HHH-hcchHHHHHH---HHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 211 2233444443 3555666666677788899999999999999999999999999999986543
No 88
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=93.11 E-value=2.3 Score=42.26 Aligned_cols=69 Identities=19% Similarity=0.178 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHH
Q 013023 172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFN 251 (451)
Q Consensus 172 ~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~ 251 (451)
..+-+..|+++..++.++.+|.+.+++...-.+. .+.++..
T Consensus 195 ~~~nil~G~~w~ignl~~~is~~~~G~a~af~lS---------------------------------------Q~~vvIS 235 (269)
T PF06800_consen 195 SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLS---------------------------------------QLGVVIS 235 (269)
T ss_pred hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHH---------------------------------------hHHHHHH
Confidence 3345667888999999999999999888887777 7888989
Q ss_pred HHHHHHHhCcccChhHHH----HHHHHHHHhh
Q 013023 252 AAASQFILGQQLPLTLWL----SLAPVVIGVS 279 (451)
Q Consensus 252 ~lls~~~l~ek~~~~~~l----sl~~~~~Gv~ 279 (451)
.+.+.+++||+-+++++. +++++++|.+
T Consensus 236 tlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 236 TLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 999999999998887654 4444555544
No 89
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=91.75 E-value=7 Score=40.03 Aligned_cols=147 Identities=14% Similarity=0.123 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHH-HhhchhhhhcchhhhhhhhchHHHHHHHH
Q 013023 290 WTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAI-IVEGPQLIKHGLSDAISKVGMVKFISDLF 368 (451)
Q Consensus 290 ~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al-~~e~~~~~~~~~~~~~~~~~~~~~~~~l~ 368 (451)
..|+++..+++++.+.+.+=.||. |+.+--+.-..+.+++-+ .+|... ..+-|+..+ .+..... ..+...+
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv-k~WsWEs~Wlv~gi~swl-i~P~~~a~l~ip~~~~-----i~~~~~~-~~l~~~~ 77 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV-KGWSWESYWLVQGIFSWL-IVPWLWALLAIPDFFS-----IYSATPA-STLFWTF 77 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc-CCccHHHHHHHHHHHHHH-HHHHHHHHHhCCcHHH-----HHHhCCh-hHHHHHH
Confidence 579999999999999988888877 444443433344544444 344433 234444321 2222211 1222223
Q ss_pred HHHHHHHHHHHHHHHHhhhcC-hHHHHHHHHHHHHHHHHHHHHH-------hCCcCchhhHHHHHHHHHHHHHHHhhhhh
Q 013023 369 WVGMFYHLYNQLATNTLERVA-PLTHAVGNVLKRVFVIGFSILA-------FGNKISTQTGIGTVIAIAGVAAYSYIKAQ 440 (451)
Q Consensus 369 ~~gi~~~~~~~~~~~~l~~~s-~lt~sv~~~lk~v~~i~ls~i~-------fge~ls~~~iiG~~lii~Gv~ly~~~~~~ 440 (451)
..|++.-..+...=..+++.+ ++..++..-+-.++..++--++ ++++-....++|.++++.|+.+..+....
T Consensus 78 l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~ 157 (344)
T PF06379_consen 78 LFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSM 157 (344)
T ss_pred HHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHh
Confidence 333322222111112233333 2233333333333333332233 22333457899999999999988876555
Q ss_pred HHHH
Q 013023 441 MEEE 444 (451)
Q Consensus 441 ~~~~ 444 (451)
+|++
T Consensus 158 Ke~~ 161 (344)
T PF06379_consen 158 KEKE 161 (344)
T ss_pred hhhh
Confidence 4443
No 90
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.03 E-value=8.5 Score=34.91 Aligned_cols=136 Identities=9% Similarity=0.134 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCC-hHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHH
Q 013023 290 WTGFISAMISNISFTYRSIYSKKAMTDMD-STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLF 368 (451)
Q Consensus 290 ~~G~~l~l~s~l~~al~~v~~kk~~~~~~-~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~ 368 (451)
+...+.++.+..+-....-...++.+..+ |.--....+..+.+.++.+.++.++.+... ......+ | .+
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a-----~~~~~pw---W--~~ 73 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLA-----AVASAPW---W--AW 73 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchh-----hccCCch---H--HH
Confidence 45667788888888888888877776665 555555566666776666666554433211 1111111 1 22
Q ss_pred HHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHH-HHHHHHHHHH-hC---CcCchhhHHHHHHHHHHHHHHH
Q 013023 369 WVGMFYHLYNQLATNTLERVAPLTHAVGNVLKR-VFVIGFSILA-FG---NKISTQTGIGTVIAIAGVAAYS 435 (451)
Q Consensus 369 ~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~-v~~i~ls~i~-fg---e~ls~~~iiG~~lii~Gv~ly~ 435 (451)
..|+++..+-........+.++.+.......-. +..++++.+= || .+++...++|.+++++|+++..
T Consensus 74 ~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 74 IGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred HccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 344555555555555568888777655444433 3444555443 33 4699999999999999966544
No 91
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=90.28 E-value=5.2 Score=40.29 Aligned_cols=132 Identities=11% Similarity=0.170 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCC-cHHHHHHHHHHHHHHHHHHHHHhCCCCC-----CCCCHHHHHHHHHHHHHH
Q 013023 109 VTGFFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPKR-----APIDSKLLKLLIPVAVCH 182 (451)
Q Consensus 109 ~~~~~~~~w~~~~~~~~i~nK~ll~~f~-~P~~lt~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~ 182 (451)
.-...++.+.++-...+-.++.++.++. .++.+.+.--++..++..........-. -..+++.++.++..+.+.
T Consensus 172 ~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~g 251 (327)
T KOG1581|consen 172 IGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCG 251 (327)
T ss_pred HhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhh
Confidence 3445556666655566677778887544 2333333333333333333322111111 124577888999999999
Q ss_pred HHHHHHHHHhhhc-hhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCc
Q 013023 183 ALGHVTSNVSFAA-VAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQ 261 (451)
Q Consensus 183 ~~~~~~~~~sl~~-vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~e 261 (451)
+.++.+-..-+.. .++.++++.. +=-++..+++.+.++.
T Consensus 252 avGQ~FI~~TI~~FGslt~t~I~t----------------------------------------tRk~~si~lS~i~f~h 291 (327)
T KOG1581|consen 252 AVGQLFIFYTIERFGSLTFTTIMT----------------------------------------TRKMVSIMLSCIVFGH 291 (327)
T ss_pred hhhhheehhhHhhcccHHHHHHHH----------------------------------------HHHHHHHHHHHHHhCC
Confidence 8887766666543 4454444432 4456788999999999
Q ss_pred ccChhHHHHHHHHHHHhhh
Q 013023 262 QLPLTLWLSLAPVVIGVSM 280 (451)
Q Consensus 262 k~~~~~~lsl~~~~~Gv~l 280 (451)
++++.+|.++.+++.|..+
T Consensus 292 ~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 292 PLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred ccchhhccCeeeehHHHHH
Confidence 9999999999999888764
No 92
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=89.99 E-value=0.1 Score=51.29 Aligned_cols=56 Identities=20% Similarity=0.218 Sum_probs=47.2
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHH
Q 013023 380 LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 435 (451)
Q Consensus 380 ~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~ 435 (451)
..|+.+++.+-.-+++.....|++++++++++++|+.|..+.+|..+.+.|+.+..
T Consensus 113 lmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIv 168 (346)
T KOG4510|consen 113 LMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIV 168 (346)
T ss_pred HHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEe
Confidence 33444566666677778888999999999999999999999999999999998654
No 93
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=89.67 E-value=0.82 Score=39.45 Aligned_cols=71 Identities=20% Similarity=0.319 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHH
Q 013023 172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFN 251 (451)
Q Consensus 172 ~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~ 251 (451)
++..+|..+...+ .+.+.+.+...++|.+..+.. ++.=+||
T Consensus 42 ~~y~ipf~lNq~G-Sv~f~~~L~~~dlSlavPi~N--------------------------------------sl~fvfT 82 (113)
T PF10639_consen 42 PKYIIPFLLNQSG-SVLFFLLLGSADLSLAVPIAN--------------------------------------SLAFVFT 82 (113)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHhcCCceeeehHHh--------------------------------------HHHHHHH
Confidence 4556666665544 455667777777777665530 5666789
Q ss_pred HHHHHHHhCcccChhHHHHHHHHHHHhhhh
Q 013023 252 AAASQFILGQQLPLTLWLSLAPVVIGVSMA 281 (451)
Q Consensus 252 ~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~ 281 (451)
++.++++.+|..+++.++++++++.|+.+.
T Consensus 83 ~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 83 ALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 999998888889999999999999999764
No 94
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=87.99 E-value=2.7 Score=34.69 Aligned_cols=45 Identities=22% Similarity=0.173 Sum_probs=24.3
Q ss_pred HHhhhcChH-HHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHH
Q 013023 383 NTLERVAPL-THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIA 427 (451)
Q Consensus 383 ~~l~~~s~l-t~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~li 427 (451)
..+++.+.. .+.+..-+..+.+.+.|+++|||++|..+++|++++
T Consensus 48 ~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 48 LALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 345666543 336666678899999999999999999999999875
No 95
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.44 E-value=19 Score=32.72 Aligned_cols=118 Identities=19% Similarity=0.193 Sum_probs=69.0
Q ss_pred HHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHH
Q 013023 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID--SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHT 203 (451)
Q Consensus 126 i~nK~ll~~f~~P~~lt~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ 203 (451)
-.|-.+-.....|..-+++.+.++...+.+.... ..+.++.. ++..+..+.-|++.+.....+......++...+++
T Consensus 22 ~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~-~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t~~ 100 (150)
T COG3238 22 AINGRLARYLGSPLLASLISFLVGTVLLLILLLI-KQGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAATTIA 100 (150)
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH-hcCCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHHHHH
Confidence 4455565556679999999999997666544433 22222222 12122233344555544444555556666665554
Q ss_pred hhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHh----CcccChhHHHHHHHHHHHhh
Q 013023 204 IKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFIL----GQQLPLTLWLSLAPVVIGVS 279 (451)
Q Consensus 204 ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l----~ek~~~~~~lsl~~~~~Gv~ 279 (451)
+- + +-+-+..+++..+=. ++++++.++++++++++|+.
T Consensus 101 l~---------------------i-----------------~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil 142 (150)
T COG3238 101 LV---------------------I-----------------AGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGIL 142 (150)
T ss_pred HH---------------------H-----------------HHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHH
Confidence 44 1 334444445554432 36899999999999999966
Q ss_pred hhc
Q 013023 280 MAS 282 (451)
Q Consensus 280 l~~ 282 (451)
++.
T Consensus 143 ~~~ 145 (150)
T COG3238 143 LAR 145 (150)
T ss_pred Hhc
Confidence 553
No 96
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=86.18 E-value=0.5 Score=48.63 Aligned_cols=76 Identities=11% Similarity=0.106 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhhh
Q 013023 364 ISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 439 (451)
Q Consensus 364 ~~~l~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~~ 439 (451)
....+..|.+.++.|+.....++.++.....+.....-+++..++.++-+|++|...+++..+.++|+++.+..+.
T Consensus 159 ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s 234 (416)
T KOG2765|consen 159 AKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDS 234 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccc
Confidence 3445667788888888888889999999999999999999999999999999999999999999999987766544
No 97
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=83.63 E-value=0.7 Score=43.68 Aligned_cols=64 Identities=17% Similarity=0.298 Sum_probs=54.4
Q ss_pred HHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhhhhh
Q 013023 377 YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 440 (451)
Q Consensus 377 ~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~~~~ 440 (451)
-|+.....+++.+|...+-.......++.+++++++||++....++..++++.|+.+..|....
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~ 129 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE 129 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch
Confidence 3444445679999999999999999999999999999999999999999999999876655443
No 98
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=78.45 E-value=0.63 Score=45.42 Aligned_cols=132 Identities=12% Similarity=0.141 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHHHHHH
Q 013023 292 GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 371 (451)
Q Consensus 292 G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 371 (451)
+++.+++=++.|+.--....|. +-+|.+.+.-+++-+.++.+...++ ..|.. ....+..-+.+|
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~--GG~p~qQ~lGtT~GALifaiiv~~~-~~p~~-------------T~~~~iv~~isG 66 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF--GGKPYQQTLGTTLGALIFAIIVFLF-VSPEL-------------TLTIFIVGFISG 66 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec--CCChhHhhhhccHHHHHHHHHHhee-ecCcc-------------chhhHHHHHHhh
Confidence 4567788888888776665555 2345555544444444444443333 22221 112344456677
Q ss_pred HHHHHHHHHHHHHhhhcChHHHH-HHHHHHHHHHHHHHHHHhCCcCchhhHH----HHHHHHHHHHHHHhhhh
Q 013023 372 MFYHLYNQLATNTLERVAPLTHA-VGNVLKRVFVIGFSILAFGNKISTQTGI----GTVIAIAGVAAYSYIKA 439 (451)
Q Consensus 372 i~~~~~~~~~~~~l~~~s~lt~s-v~~~lk~v~~i~ls~i~fge~ls~~~ii----G~~lii~Gv~ly~~~~~ 439 (451)
.+....+...|+.++..+...+. +.+-++-+-+.++++++|||.-+..+++ .+++++.|+++.++.++
T Consensus 67 ~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 67 AFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 77777776666666555443332 2334677889999999999987776643 45677788887776665
No 99
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=77.25 E-value=3.9 Score=35.28 Aligned_cols=38 Identities=34% Similarity=0.305 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHH
Q 013023 396 GNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAA 433 (451)
Q Consensus 396 ~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~l 433 (451)
.|.+.-+++.+.++++.+|..+...++|++++++|+.+
T Consensus 74 ~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 74 ANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 45667788999998888888899999999999999864
No 100
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=74.38 E-value=14 Score=37.68 Aligned_cols=134 Identities=13% Similarity=0.084 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcc----CCcHHHHHHHHHHHHHHHHH-HHHHhCCCCCC------CCCHHHHHHHHH
Q 013023 109 VTGFFFFMWYFLNVIFNILNKRIYNY----FPYPYFVSVIHLLVGVVYCL-VSWAVGLPKRA------PIDSKLLKLLIP 177 (451)
Q Consensus 109 ~~~~~~~~w~~~~~~~~i~nK~ll~~----f~~P~~lt~~~~~~~~l~~~-~~~~~~~~~~~------~~~~~~~~~~~~ 177 (451)
.-..+...+-.....-+++.|.++.+ .+ ++.+...+--++...++ +.+....+... +.+... .....
T Consensus 163 ~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 240 (316)
T KOG1441|consen 163 FGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTF-LILLL 240 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhh-HHHHH
Confidence 33444455555666777888998852 44 66666666666665555 55433222111 212222 22223
Q ss_pred HHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHH
Q 013023 178 VAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQF 257 (451)
Q Consensus 178 ~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~ 257 (451)
.+++...-+......+..++.-.+++.. ..--+++.+.+++
T Consensus 241 ~sv~~f~~Nls~f~~ig~tSalT~~V~g---------------------------------------~~K~~~vi~~s~~ 281 (316)
T KOG1441|consen 241 NSVLAFLLNLSAFLVIGRTSALTYSVAG---------------------------------------HMKRIVVIVVSWL 281 (316)
T ss_pred HHHHHHHHHHHHHHHHcccCchhhhhhc---------------------------------------cceEEEEEEeEee
Confidence 3344444444555555666655555554 2333345567888
Q ss_pred HhCcccChhHHHHHHHHHHHhhhhcc
Q 013023 258 ILGQQLPLTLWLSLAPVVIGVSMASL 283 (451)
Q Consensus 258 ~l~ek~~~~~~lsl~~~~~Gv~l~~~ 283 (451)
++++++++.+.++.++.++|+.+-..
T Consensus 282 iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 282 IFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred eecCCCchhhHHHHHHHHHHHHHHHH
Confidence 89999999999999999999988753
No 101
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=70.12 E-value=10 Score=37.05 Aligned_cols=37 Identities=19% Similarity=0.335 Sum_probs=32.7
Q ss_pred chhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhhh
Q 013023 245 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 281 (451)
Q Consensus 245 ~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~ 281 (451)
.+--+|+.+.+.++++..++.++|++..+++.+...=
T Consensus 275 TTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 275 TTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred ehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 4567899999999999999999999999999887653
No 102
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.91 E-value=98 Score=26.16 Aligned_cols=30 Identities=17% Similarity=0.155 Sum_probs=26.2
Q ss_pred HHHHHHHhCcccChhHHHHHHHHHHHhhhh
Q 013023 252 AAASQFILGQQLPLTLWLSLAPVVIGVSMA 281 (451)
Q Consensus 252 ~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~ 281 (451)
+.++.+.++|.+.+..+.+.+++.+|+.++
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 567899999999999999999888888765
No 103
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=58.16 E-value=2.2e+02 Score=29.02 Aligned_cols=130 Identities=17% Similarity=0.163 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCC-hH--HHHHHHHHHHHHHHHHHHHH--hhchhhhhcchhhhhhhhchHHHHHHH
Q 013023 293 FISAMISNISFTYRSIYSKKAMTDMD-ST--NIYAYISIIALFVCIPPAII--VEGPQLIKHGLSDAISKVGMVKFISDL 367 (451)
Q Consensus 293 ~~l~l~s~l~~al~~v~~kk~~~~~~-~~--~l~~~~~~~s~l~llp~al~--~e~~~~~~~~~~~~~~~~~~~~~~~~l 367 (451)
...++.-.++-.+-.+..|....+++ |. .++.+|+..+.+.+...-.. .+-+.+ .+.. .+ .++
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l---~~~~--~k---k~~---- 81 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPL---DLRT--AK---KWF---- 81 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCc---ChHH--HH---HHc----
Confidence 34444445555555566666665432 33 44458888877766544332 122211 0110 00 011
Q ss_pred HHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHH
Q 013023 368 FWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 435 (451)
Q Consensus 368 ~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~ 435 (451)
-..++.+...+.....+++.+.-...+.....++++.+...++||.+++...+.....+++|...+.
T Consensus 82 -P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~ 148 (314)
T KOG1444|consen 82 -PVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA 148 (314)
T ss_pred -cHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence 1122222333334456789999999999999999999999999999999999999999999987654
No 104
>PRK02237 hypothetical protein; Provisional
Probab=55.12 E-value=19 Score=30.82 Aligned_cols=36 Identities=11% Similarity=0.057 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhccc
Q 013023 249 FFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 284 (451)
Q Consensus 249 vf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~ 284 (451)
+...+..+.+.++|+++..+++.+++++|+.++.+.
T Consensus 71 ~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 71 AGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 335567888999999999999999999999887554
No 105
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=54.73 E-value=1.8e+02 Score=28.51 Aligned_cols=120 Identities=10% Similarity=0.038 Sum_probs=72.4
Q ss_pred HHHHHHHHHHH--HccCCcHHHHHHHHHHHHHHHHHHHH-HhCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013023 121 NVIFNILNKRI--YNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPKR----APIDSKLLKLLIPVAVCHALGHVTSNVSF 193 (451)
Q Consensus 121 ~~~~~i~nK~l--l~~f~~P~~lt~~~~~~~~l~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~sl 193 (451)
+..+.+..|+- +++|. -.--.++.-+.+...++.+- ...-..+ ..++..-....++-|++..+-.+++.+.+
T Consensus 167 saafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcv 245 (309)
T COG5070 167 SAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCV 245 (309)
T ss_pred HHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeE
Confidence 33444444544 33444 33344455555655444332 2211111 12333445567777888777777888888
Q ss_pred hchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchhHHHHHHHHHHHhCcccChhHHHHHHH
Q 013023 194 AAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAP 273 (451)
Q Consensus 194 ~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~Pvf~~lls~~~l~ek~~~~~~lsl~~ 273 (451)
.-.+-..+.|.. ++.-.-.++.+.++++++.+...+.++.+
T Consensus 246 rVtSSTtySMvG---------------------------------------ALNKlp~alaGlvffdap~nf~si~sill 286 (309)
T COG5070 246 RVTSSTTYSMVG---------------------------------------ALNKLPIALAGLVFFDAPVNFLSIFSILL 286 (309)
T ss_pred eehhhhHHHHHH---------------------------------------HhhhChHHHhhhhhcCCchhHHHHHHHHH
Confidence 888877788887 56655558888889999888888888776
Q ss_pred HHHHhhh
Q 013023 274 VVIGVSM 280 (451)
Q Consensus 274 ~~~Gv~l 280 (451)
+....++
T Consensus 287 Gflsg~i 293 (309)
T COG5070 287 GFLSGAI 293 (309)
T ss_pred HHHHHHH
Confidence 6554443
No 106
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=54.72 E-value=16 Score=31.11 Aligned_cols=37 Identities=14% Similarity=0.174 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhcccc
Q 013023 249 FFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE 285 (451)
Q Consensus 249 vf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~~ 285 (451)
+...+-.+.+.++++++..+++..++++|+.++.+.+
T Consensus 69 ~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 69 VASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 4456778889999999999999999999999886543
No 107
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=51.00 E-value=1.3e+02 Score=25.65 Aligned_cols=30 Identities=23% Similarity=0.260 Sum_probs=24.6
Q ss_pred HHHHHHHhCcccChhHHHHHHHHHHHhhhh
Q 013023 252 AAASQFILGQQLPLTLWLSLAPVVIGVSMA 281 (451)
Q Consensus 252 ~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~ 281 (451)
+.++.++++|++++....+.+.+++++..+
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 456778999999999999999887776543
No 108
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=50.54 E-value=1.2e+02 Score=25.96 Aligned_cols=28 Identities=14% Similarity=0.166 Sum_probs=24.8
Q ss_pred HHHHHHHhCCcCchhhHHHHHHHHHHHH
Q 013023 405 IGFSILAFGNKISTQTGIGTVIAIAGVA 432 (451)
Q Consensus 405 i~ls~i~fge~ls~~~iiG~~lii~Gv~ 432 (451)
..+++++++|+++...+.|.++++++++
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~ 104 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVY 104 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhh
Confidence 4578999999999999999999988865
No 109
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=50.50 E-value=12 Score=32.80 Aligned_cols=42 Identities=19% Similarity=0.396 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHccCC-cHHHHHHHHHHH
Q 013023 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLV 148 (451)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~i~nK~ll~~f~-~P~~lt~~~~~~ 148 (451)
.+.+..+.+++.+.++.-.++-|.++..++ ||++++-+.-..
T Consensus 55 ~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlTt~g 97 (130)
T PF08627_consen 55 NFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLTTFG 97 (130)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhcccc
Confidence 456666666666666666688888888765 888888664333
No 110
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=46.45 E-value=15 Score=37.43 Aligned_cols=120 Identities=14% Similarity=0.071 Sum_probs=73.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhcchhhhhhhhchHHHHHHH
Q 013023 288 FNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDL 367 (451)
Q Consensus 288 ~~~~G~~l~l~s~l~~al~~v~~kk~~~~~~~~~l~~~~~~~s~l~llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l 367 (451)
.+..|.++++.+++..+...++.||..++......- ..+++ ... ... +.|..-
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~r----------------a~~gg------~~y----l~~-~~Ww~G 70 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLR----------------AGEGG------YGY----LKE-PLWWAG 70 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHHHhhhccc----------------ccCCC------cch----hhh-HHHHHH
Confidence 356788888888888888888888765443221000 01111 000 000 112222
Q ss_pred HHHHHHHHHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHhh
Q 013023 368 FWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 437 (451)
Q Consensus 368 ~~~gi~~~~~~~~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~~ 437 (451)
++.-..+-..|+.+| .-.++....-.+.+.-+...+++.++++|+++....+|++++++|...--.+
T Consensus 71 ~ltm~vGei~NFaAY---aFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 71 MLTMIVGEIANFAAY---AFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HHHHHHHhHhhHHHH---hhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence 222233445566555 3444444555666788899999999999999999999999999998754433
No 111
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=42.10 E-value=67 Score=32.39 Aligned_cols=49 Identities=14% Similarity=0.150 Sum_probs=39.4
Q ss_pred hhcChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHH
Q 013023 386 ERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 434 (451)
Q Consensus 386 ~~~s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly 434 (451)
..+++....+.--..-+++-++|..+++.+++..||.|+..+.+|+...
T Consensus 108 ~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviV 156 (372)
T KOG3912|consen 108 NLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIV 156 (372)
T ss_pred HHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhhee
Confidence 3455555555555566788899999999999999999999999998754
No 112
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=41.82 E-value=29 Score=29.48 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhcccc
Q 013023 249 FFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE 285 (451)
Q Consensus 249 vf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~~ 285 (451)
+...+...++.++++++..|.+.+++++|+.++...+
T Consensus 70 ~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 70 AASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 3455667778899999999999999999998876543
No 113
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=41.48 E-value=2.2e+02 Score=24.12 Aligned_cols=37 Identities=11% Similarity=0.193 Sum_probs=28.9
Q ss_pred HHHHHHHH----HHHHHHHhCCcCchhhHHHHHHHHHHHHH
Q 013023 397 NVLKRVFV----IGFSILAFGNKISTQTGIGTVIAIAGVAA 433 (451)
Q Consensus 397 ~~lk~v~~----i~ls~i~fge~ls~~~iiG~~lii~Gv~l 433 (451)
-.++.+++ ..+|++.++|++.+..+.|..++..|+..
T Consensus 72 K~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~f 112 (116)
T COG3169 72 KTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYF 112 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 33444444 45799999999999999999999888754
No 114
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=31.77 E-value=2e+02 Score=26.05 Aligned_cols=27 Identities=11% Similarity=-0.032 Sum_probs=17.3
Q ss_pred hhcChHHHHHHHHHHHHHHHHHHHHHh
Q 013023 386 ERVAPLTHAVGNVLKRVFVIGFSILAF 412 (451)
Q Consensus 386 ~~~s~lt~sv~~~lk~v~~i~ls~i~f 412 (451)
.+-+.+..+...++-|.+.++++.+.+
T Consensus 70 ~EkslL~sA~LvYi~PL~~l~v~~~La 96 (150)
T COG3086 70 EEKSLLKSALLVYIFPLVGLFLGAILA 96 (150)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666666777777766666553
No 115
>PRK10263 DNA translocase FtsK; Provisional
Probab=31.05 E-value=5e+02 Score=31.81 Aligned_cols=27 Identities=15% Similarity=0.233 Sum_probs=16.1
Q ss_pred HHHHhhhccchhHHHHHHHHHHHhCcc
Q 013023 236 FIYWFYFFSALEPFFNAAASQFILGQQ 262 (451)
Q Consensus 236 ~~~~~~~lf~l~Pvf~~lls~~~l~ek 262 (451)
+..+||+.-.+.|++..+..+++++++
T Consensus 75 L~~LFGl~AYLLP~LL~~~a~~l~R~r 101 (1355)
T PRK10263 75 LFFIFGVMAYTIPVIIVGGCWFAWRHQ 101 (1355)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhcc
Confidence 344566666677776656666655543
No 116
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=29.95 E-value=67 Score=26.27 Aligned_cols=29 Identities=17% Similarity=0.218 Sum_probs=22.9
Q ss_pred cCchhhHHHHHHHHHHHHHHHhhhhhHHH
Q 013023 415 KISTQTGIGTVIAIAGVAAYSYIKAQMEE 443 (451)
Q Consensus 415 ~ls~~~iiG~~lii~Gv~ly~~~~~~~~~ 443 (451)
..++.+++|.+++++|..+|...+.++|-
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~~~Pev 32 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRFFRPEV 32 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHCcch
Confidence 46788999999999999999865555443
No 117
>PRK10712 PTS system fructose-specific transporter subunits IIBC; Provisional
Probab=29.31 E-value=8.2e+02 Score=27.10 Aligned_cols=57 Identities=23% Similarity=0.315 Sum_probs=40.2
Q ss_pred chhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhh
Q 013023 245 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKA 313 (451)
Q Consensus 245 ~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~~~~~~~~G~~l~l~s~l~~al~~v~~kk~ 313 (451)
-+.|++...++|=+-++. ++++.++|-.++...+ .||+=++++++.-++-.-+.||.
T Consensus 280 lmvpvla~yia~sia~rp-------glapg~i~g~~a~~~~-----~GFlG~Ilag~lagyv~~~l~K~ 336 (563)
T PRK10712 280 LMVPVLAGYIAFSIADRP-------GLTPGLIGGMLAVSTG-----SGFIGGIIAGFLAGYVAKLISTK 336 (563)
T ss_pred HHHHHHHHHHHHHhcCCc-------cchHHHHHHHHHhcCC-----chHHHHHHHHHHHHHHHHHHHHh
Confidence 478998888888776543 6777888887764432 57777777777777666666665
No 118
>PRK02237 hypothetical protein; Provisional
Probab=27.65 E-value=1.3e+02 Score=25.79 Aligned_cols=44 Identities=18% Similarity=0.106 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHh
Q 013023 393 HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 436 (451)
Q Consensus 393 ~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~ 436 (451)
++..+-+--+.+++..+.+-|.+++...++|.++++.|+.+..+
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 35555566778888999999999999999999999999976543
No 119
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=27.62 E-value=8.2e+02 Score=26.59 Aligned_cols=28 Identities=18% Similarity=-0.056 Sum_probs=16.8
Q ss_pred HhhhcChHHHHHHHHHHHHHHHHHHHHH
Q 013023 384 TLERVAPLTHAVGNVLKRVFVIGFSILA 411 (451)
Q Consensus 384 ~l~~~s~lt~sv~~~lk~v~~i~ls~i~ 411 (451)
...|+.++...+.....++-..+.+.+.
T Consensus 340 ~~GRv~si~~~~~~g~~~lGsll~G~la 367 (524)
T PF05977_consen 340 VRGRVFSIYQMVFFGGMPLGSLLWGFLA 367 (524)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555566666666666666654
No 120
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=26.53 E-value=4e+02 Score=26.92 Aligned_cols=40 Identities=13% Similarity=0.086 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhCcccChhHHHHHHHHHHHhhhhccccccc
Q 013023 249 FFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSF 288 (451)
Q Consensus 249 vf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~~~~~~ 288 (451)
-.+.+++++++.++++..-.-+.++++.|+.+-.+.+.+-
T Consensus 298 avTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk 337 (367)
T KOG1582|consen 298 AVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNK 337 (367)
T ss_pred HHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCC
Confidence 4578899999999999999999999999999887766443
No 121
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=24.01 E-value=1.3e+02 Score=25.68 Aligned_cols=44 Identities=23% Similarity=0.157 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHHHHHh
Q 013023 393 HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 436 (451)
Q Consensus 393 ~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ly~~ 436 (451)
++..+-+--+.+++..+.+-|++++...++|..+++.|+.+..+
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 35556667788889999999999999999999999999976543
No 122
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=22.43 E-value=2.2e+02 Score=24.81 Aligned_cols=43 Identities=12% Similarity=-0.015 Sum_probs=19.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhCCcCchhhHHHHHHHHHHHH
Q 013023 389 APLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVA 432 (451)
Q Consensus 389 s~lt~sv~~~lk~v~~i~ls~i~fge~ls~~~iiG~~lii~Gv~ 432 (451)
+.+..+...++-|++.++++.++- ..+........+..++|..
T Consensus 66 ~~~~aa~l~Y~lPll~li~g~~l~-~~~~~~e~~~~l~~l~~l~ 108 (135)
T PF04246_consen 66 SLLKAAFLVYLLPLLALIAGAVLG-SYLGGSELWAILGGLLGLA 108 (135)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 334445555556666665555432 3322224444444444443
No 123
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=21.92 E-value=1.2e+02 Score=22.05 Aligned_cols=23 Identities=9% Similarity=0.225 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHH
Q 013023 424 TVIAIAGVAAYSYIKAQMEEEKR 446 (451)
Q Consensus 424 ~~lii~Gv~ly~~~~~~~~~~~~ 446 (451)
+.+++.|+++|.+.+.++++-++
T Consensus 19 ~~~~Figiv~wa~~p~~k~~f~e 41 (48)
T cd01324 19 LALFFLGVVVWAFRPGRKKAFDE 41 (48)
T ss_pred HHHHHHHHHHHHhCCCcchhHHH
Confidence 56788999999988776555443
No 124
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=21.56 E-value=1.3e+02 Score=25.83 Aligned_cols=37 Identities=16% Similarity=0.118 Sum_probs=29.3
Q ss_pred chhHHHHHHHHHHHhCcccChhHHHHHHHHHHHhhhh
Q 013023 245 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 281 (451)
Q Consensus 245 ~l~Pvf~~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~ 281 (451)
++.-.|+++.++.+.-|....+.+++..++++|+.+.
T Consensus 87 sltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 87 SLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred hhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 4555678888887777777788889999999998765
No 125
>COG5373 Predicted membrane protein [Function unknown]
Probab=20.67 E-value=1.4e+03 Score=26.71 Aligned_cols=15 Identities=20% Similarity=-0.046 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHcc--CC
Q 013023 122 VIFNILNKRIYNY--FP 136 (451)
Q Consensus 122 ~~~~i~nK~ll~~--f~ 136 (451)
.+-.++-|+-.+. |+
T Consensus 145 lG~~FLlkY~~E~gl~~ 161 (931)
T COG5373 145 LGGAFLLKYAIEAGLFG 161 (931)
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 4455777888775 55
No 126
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=20.57 E-value=7.1e+02 Score=23.32 Aligned_cols=49 Identities=14% Similarity=0.145 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcc----C--CcHHHHHHHHHHHHHHHHHHHH
Q 013023 109 VTGFFFFMWYFLNVIFNILNKRIYNY----F--PYPYFVSVIHLLVGVVYCLVSW 157 (451)
Q Consensus 109 ~~~~~~~~w~~~~~~~~i~nK~ll~~----f--~~P~~lt~~~~~~~~l~~~~~~ 157 (451)
....|...|+.++....+.--...+. . ..+.....+|...+.+++...+
T Consensus 30 ~~~af~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lGv~ll~~a~ 84 (214)
T PF11139_consen 30 NLLAFLAGWFLGYLAVGLVLLFGLDALPSGSSSAPSPVVGWLQLVLGVLLLLLAV 84 (214)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCccHHHHHHHHHHHHHHHHHH
Confidence 45667777777666555443333332 1 1356778889999977665443
No 127
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=20.23 E-value=4.9e+02 Score=21.76 Aligned_cols=60 Identities=8% Similarity=0.147 Sum_probs=31.2
Q ss_pred HhhhcChHHHHHHHHHHHHHHHHHHHH---HhCC-cCchhhHHHHHHHHHHHHHHHhhhhhHHH
Q 013023 384 TLERVAPLTHAVGNVLKRVFVIGFSIL---AFGN-KISTQTGIGTVIAIAGVAAYSYIKAQMEE 443 (451)
Q Consensus 384 ~l~~~s~lt~sv~~~lk~v~~i~ls~i---~fge-~ls~~~iiG~~lii~Gv~ly~~~~~~~~~ 443 (451)
.++++.-+..-..-.+.-++.++++.+ +.++ .+-...|.|...-+++..++....+|.++
T Consensus 24 ~IkkT~~v~~K~iPlIs~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e~~t~r~~~ 87 (93)
T PF06946_consen 24 AIKKTKVVPNKWIPLISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFEQFTNRSKK 87 (93)
T ss_pred HHHHhccCCcchhhHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHHHHHhhhhh
Confidence 456655333333333344445555444 3332 24444577887777777776665554433
No 128
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=20.10 E-value=9.8e+02 Score=24.77 Aligned_cols=235 Identities=15% Similarity=0.135 Sum_probs=121.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhhchhHhHHHHhhhchhcccccCchhHHHHHhHhhhhhhhhHHHHHHhhhccchh
Q 013023 168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALE 247 (451)
Q Consensus 168 ~~~~~~~~~~~~l~~~~~~~~~~~sl~~vsvs~~~~ik~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lf~l~ 247 (451)
+.+.+...+..|++...+...+-.+++|+++|..+.+. ++....+ . ++.
T Consensus 69 ~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~---------------lGl~~~~-----------G-----Tli 117 (344)
T PF06379_consen 69 PASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIA---------------LGLCAVF-----------G-----TLI 117 (344)
T ss_pred ChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHH---------------HHHHHHH-----------h-----hch
Confidence 34456667778888888888999999999999887776 1111111 0 444
Q ss_pred HHHH-HHHHHHHhCcccChhHHHHHHHHHHHhhhhcc----cc-------cccc-HHHHHHHHHHHHHHHHHHHHHHhhc
Q 013023 248 PFFN-AAASQFILGQQLPLTLWLSLAPVVIGVSMASL----TE-------LSFN-WTGFISAMISNISFTYRSIYSKKAM 314 (451)
Q Consensus 248 Pvf~-~lls~~~l~ek~~~~~~lsl~~~~~Gv~l~~~----~~-------~~~~-~~G~~l~l~s~l~~al~~v~~kk~~ 314 (451)
|... --+. .++.++-.....++++++++|+++... +| .++| -.|.+.++++.+..+..+.-.+.-.
T Consensus 118 ppi~~g~~~-~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~ 196 (344)
T PF06379_consen 118 PPIFQGTFD-ELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGK 196 (344)
T ss_pred HHHHcCccc-ccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCC
Confidence 4311 0011 123344456788999999999998742 11 1233 4699999999998888877554321
Q ss_pred --------CCCChHH--HHHH--HHHHHHHHHHHHHHHhhc-hhhhhcchhhh-hhhhchHHHHHHHHHHHHHHHHHHH-
Q 013023 315 --------TDMDSTN--IYAY--ISIIALFVCIPPAIIVEG-PQLIKHGLSDA-ISKVGMVKFISDLFWVGMFYHLYNQ- 379 (451)
Q Consensus 315 --------~~~~~~~--l~~~--~~~~s~l~llp~al~~e~-~~~~~~~~~~~-~~~~~~~~~~~~l~~~gi~~~~~~~- 379 (451)
...+++. +-.| ...-+.+.-+...++... .... +...|. ..+.....-+....+.|+..|....
T Consensus 197 pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~~~l~~~k~~-s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfff 275 (344)
T PF06379_consen 197 PIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCLILLAKNKNW-SWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFF 275 (344)
T ss_pred cHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHHHHHhhcCCC-ccccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 1122321 1111 122222333333333210 0000 000010 0011111222223334444433222
Q ss_pred ---HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhCC------cCchhhHHHHHHHHHHHHHHHh
Q 013023 380 ---LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGN------KISTQTGIGTVIAIAGVAAYSY 436 (451)
Q Consensus 380 ---~~~~~l~~~s~lt~sv~~~lk~v~~i~ls~i~fge------~ls~~~iiG~~lii~Gv~ly~~ 436 (451)
...++-..-......+.+.+.-+++-+.+.+. +| +.-..-++|.++++.++.+..+
T Consensus 276 Yg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~l-kEWKg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 276 YGMGESKLGASGPFSSWAIHMALIVLFSNVWGLIL-KEWKGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred HHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHH-HHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 22222223445666777777777777777664 44 2334557888888887766443
Done!