Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>013024
MATLSAAWMYQDRGLGPVDYSDDFITRKPNFNRFQTSFLGSFPTGILQTRLRLNNLLRRT
SSVRRIKCEKNDELPEYVSVERPPYYSYFDSASGQLEPASGARASIPGEEYWPEGTASRV
RAARAPEPTGESTGSPSYGKHPGSRRKKYKTSVRARSSEVTVESSASLEPEVSEDATEDP
KESSSEYVVYETESKAEGETEYELDKKLGRPHPFIDPKVRKPIEEPLSSEELWWNWRKSD
KEQWSRWQRRRPDVETVFLKAMAETGQIKLYGEHPTLTETALYRARRHLFKEERLKAEQE
RLERIGPIAYYSEWVKAWKRDTSREAIQKHYEETGEDENTQLIEMFCHQTDREYRIMMGN
DIRIKRDPLAMRLREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLDYLK
EHGKVISREELEEILTKEKTEEVEAGHSSKQ

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  013024
        (451 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2062286 - symbol:PTAC12 "AT2G34640" species:37...  1425  7.3e-146  1


>TAIR|locus:2062286 [details] [associations]
            symbol:PTAC12 "AT2G34640" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0009507 "chloroplast" evidence=IDA]
            [GO:0009295 "nucleoid" evidence=IDA] [GO:0009508 "plastid
            chromosome" evidence=IDA] [GO:0042793 "transcription from plastid
            promoter" evidence=RCA;IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=RCA;IMP] [GO:0008283 "cell
            proliferation" evidence=RCA] GO:GO:0009507 GO:GO:0045893
            EMBL:CP002685 GO:GO:0009508 GO:GO:0042793 IPI:IPI00537712
            RefSeq:NP_181011.2 UniGene:At.37777 PRIDE:F4IHY7
            EnsemblPlants:AT2G34640.1 GeneID:818029 KEGG:ath:AT2G34640
            OMA:IKQIWGG Uniprot:F4IHY7
        Length = 527

 Score = 1425 (506.7 bits), Expect = 7.3e-146, P = 7.3e-146
 Identities = 266/362 (73%), Positives = 308/362 (85%)

Query:    69 EKNDELPEYVSVERPPYYSYFDSASGQLEPASGARASIPGEEYWPEGTASRVRAARAPEP 128
             +K++E  EYV+VER PY+SY DS SG+LEPASGARASIPGE+YWPEGT+SRVRAARAP+P
Sbjct:    71 KKSEEGFEYVTVERHPYHSYMDSTSGKLEPASGARASIPGEDYWPEGTSSRVRAARAPQP 130

Query:   129 TGESTGSPSYGKHPGSRRKKYKTSVRARSSEVTVESSASLEPEVSEDATEDPKXXXXXXX 188
              GES+  PSYGK+PGSRRKK +   +A    VTVE++  +    SED++E+ +       
Sbjct:   131 AGESSSFPSYGKNPGSRRKKNR---KATEENVTVETNDEVSD--SEDSSEEEENDSSDGF 185

Query:   189 XXXXXX--KAEGETEYELDKKLGRPHPFIDPKVRKPIEEPLSSEELWWNWRKSDKEQWSR 246
                     + E ET +ELDKKLGRPHPFIDP  +K IE+ L+S+E WWNWRK +KEQWSR
Sbjct:   186 VTYKNEFEREEEETGFELDKKLGRPHPFIDPTKKKQIEKTLTSDESWWNWRKPEKEQWSR 245

Query:   247 WQRRRPDVETVFLKAMAETGQIKLYGEHPTLTETALYRARRHLFKEERLKAEQERLERIG 306
             WQRRRPDVETVFLKAMAETGQ+KLYGE PTLTET+LYRARRHLFKEERL+AE+ERL + G
Sbjct:   246 WQRRRPDVETVFLKAMAETGQVKLYGEEPTLTETSLYRARRHLFKEERLQAERERLAKEG 305

Query:   307 PIAYYSEWVKAWKRDTSREAIQKHYEETGEDENTQLIEMFCHQTDREYRIMMGNDIRIKR 366
             P+A+YSEWVKAWKRDTSREA+QKH+EETGEDENTQLIEMF HQTDREYRIMMG DIRIKR
Sbjct:   306 PMAFYSEWVKAWKRDTSREAVQKHFEETGEDENTQLIEMFSHQTDREYRIMMGTDIRIKR 365

Query:   367 DPLAMRLREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNMLDYLKEHGKVI 426
             DPLAMR+REDQIKQIWGGDPVYPT+NYIQDP+ V+D+RGPDFHEPTPNML YLKE+GKVI
Sbjct:   366 DPLAMRMREDQIKQIWGGDPVYPTINYIQDPNAVMDFRGPDFHEPTPNMLSYLKENGKVI 425

Query:   427 SR 428
             SR
Sbjct:   426 SR 427


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.132   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      451       405    0.0010  117 3  11 23  0.47    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  292 KB (2149 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  41.00u 0.11s 41.11t   Elapsed:  00:00:02
  Total cpu time:  41.00u 0.11s 41.11t   Elapsed:  00:00:02
  Start:  Mon May 20 19:01:00 2013   End:  Mon May 20 19:01:02 2013

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