BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>013026
MGASDPVVERETQNKEEEEGGGEGGGEEEVKDVEKGEVVVEEKVVDSNSNVNINNINGEQ
RGFNASMMQTLNPTNPLRIVINGGRRVTAPRIATPPPSQPSRQAPRIATPPPSQPSRPRS
ISTSPPAPTPTPQQASRTALNSKKYTNKISLFLFVLHMILAIGLVGFLVFKGIQGLILAS
ESIKRKEKRVLKYLLPQVEAASLLSISLSFSWQKAVRVWPKFMVHFILWSSFFLSLSAGI
LLICFQKPATDGVGVCFIAFAIGNGLYACWVSQRIGFCCKVLIISLQPVSKFSDLNQPTY
WMLGTGFLWMSFWILAVIGALNFYFPPLIIIALVLSLAWTTEVMRNVVNLTVCRVISLYY
ILGMQSSTQFCFQRALTQNLGSACLGSLFVPTIEALRIVARGLNLLEGEDEFMFSCAHCC
LRIMESIFRCGNGWAYVQVTHFSFSFRISTA

High Scoring Gene Products

Symbol, full name Information P value
AT5G13760 protein from Arabidopsis thaliana 1.3e-126
AT3G03700 protein from Arabidopsis thaliana 1.0e-22
AT3G04440 protein from Arabidopsis thaliana 1.0e-22
AT1G25500 protein from Arabidopsis thaliana 8.4e-09
DDB_G0274487
Protein PNS1
gene from Dictyostelium discoideum 1.4e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  013026
        (451 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2177110 - symbol:AT5G13760 "AT5G13760" species...  1174  1.3e-126  2
TAIR|locus:2079444 - symbol:AT3G03700 species:3702 "Arabi...   268  1.0e-22   1
TAIR|locus:2100865 - symbol:AT3G04440 species:3702 "Arabi...   268  1.0e-22   1
TAIR|locus:2031235 - symbol:AT1G25500 species:3702 "Arabi...   160  8.4e-09   1
DICTYBASE|DDB_G0274487 - symbol:DDB_G0274487 "Protein PNS...   150  1.4e-07   1


>TAIR|locus:2177110 [details] [associations]
            symbol:AT5G13760 "AT5G13760" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0019344 "cysteine biosynthetic
            process" evidence=RCA] Pfam:PF04515 GO:GO:0016021 EMBL:CP002688
            InterPro:IPR007603 PANTHER:PTHR12385 IPI:IPI00548521
            RefSeq:NP_196880.2 UniGene:At.19625 PRIDE:F4K425
            EnsemblPlants:AT5G13760.1 GeneID:831221 KEGG:ath:AT5G13760
            OMA:ACWVTRR Uniprot:F4K425
        Length = 569

 Score = 1174 (418.3 bits), Expect = 1.3e-126, Sum P(2) = 1.3e-126
 Identities = 214/308 (69%), Positives = 253/308 (82%)

Query:   139 ALNSKKYTNKISLFLFVLHMILAIGLVGFLVFKGIQGLILASESIKRKEKRVLKYLLPQV 198
             +LNS KYTNK  L LF+ H ++AIG VGFLVF+G+QGLI ++ S+KRKEK++L++LLPQV
Sbjct:   133 SLNSTKYTNKFFLLLFIFHKVVAIGFVGFLVFRGVQGLIGSNGSVKRKEKKILRFLLPQV 192

Query:   199 EAAXXXXXXXXXXWQKAVRVWPKFMVHFILWXXXXXXXXAGILLICFQKPATDGVGVCFI 258
             EAA          WQ A R+WP FM+HFILW        +GILL+CFQ PATD VGVC I
Sbjct:   193 EAASLLSIILAFLWQMAFRIWPDFMIHFILWSTFLMSLSSGILLLCFQMPATDAVGVCLI 252

Query:   259 AFAIGNGLYACWVSQRIGFCCKVLIISLQPVSKFSDLNQPTYWMLGTGFLWMSFWILAVI 318
             AF+IGNGLYACWV++RI FC K+L+ SL+PVSKFSDLN PTY+ML  GFLWMS WI  VI
Sbjct:   253 AFSIGNGLYACWVTRRIKFCSKILVKSLEPVSKFSDLNLPTYYMLAAGFLWMSMWIFGVI 312

Query:   319 GALNFYFPPLIIIALVLSLAWTTEVMRNVVNLTVCRVISLYYILGMQSSTQFCFQRALTQ 378
             GALNFYFPPL+II LVLSLAWTTEVMRN+VNLTV RVI+LYY+ GMQSST+F FQRAL++
Sbjct:   313 GALNFYFPPLVIIGLVLSLAWTTEVMRNIVNLTVSRVIALYYLRGMQSSTRFSFQRALSR 372

Query:   379 NLGSACLGSLFVPTIEALRIVARGLNLLEGEDEFMFSCAHCCLRIMESIFRCGNGWAYVQ 438
             NLGSACLGSLFVPTIEALRI+ARGLNLL+GEDEFMF CA+CCLR+M+ IF  GNGWA+VQ
Sbjct:   373 NLGSACLGSLFVPTIEALRILARGLNLLKGEDEFMFCCANCCLRLMDFIFEHGNGWAFVQ 432

Query:   439 VTHFSFSF 446
             +  +   F
Sbjct:   433 IAAYGKGF 440

 Score = 90 (36.7 bits), Expect = 1.3e-126, Sum P(2) = 1.3e-126
 Identities = 18/28 (64%), Positives = 22/28 (78%)

Query:    63 FNASMMQTLNPTNPLRIVINGGRRVTAP 90
             F AS+ + LNPTNPLRI++NGG R T P
Sbjct:    46 FLASLNR-LNPTNPLRIIVNGGSRFTTP 72


>TAIR|locus:2079444 [details] [associations]
            symbol:AT3G03700 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF04515 GO:GO:0016021
            EMBL:CP002686 EMBL:AC009540 EMBL:AC009327 InterPro:IPR007603
            PANTHER:PTHR12385 HOGENOM:HOG000006411 ProtClustDB:CLSN2684097
            UniGene:At.46096 UniGene:At.70460 EMBL:AK117149 EMBL:AK228794
            IPI:IPI00540797 RefSeq:NP_187020.1 STRING:Q9S7M7
            EnsemblPlants:AT3G03700.1 GeneID:821183 KEGG:ath:AT3G03700
            TAIR:At3g03700 InParanoid:Q9S7M7 OMA:AWPQACV PhylomeDB:Q9S7M7
            Genevestigator:Q9S7M7 Uniprot:Q9S7M7
        Length = 482

 Score = 268 (99.4 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 82/303 (27%), Positives = 125/303 (41%)

Query:   148 KISLFLFVLHMILAIGLVGFLVFK-GIQGLILASESIKRKEKRVLKYLLPQVEAAXXXXX 206
             K+   LF   +   + L+  LV    I+GLI AS          LK   P + A+     
Sbjct:    51 KLFRTLFKGLLFSQLTLISLLVIVLTIRGLISASTHHFH-----LKKWYPPLLASVAVSG 105

Query:   207 XXXXXWQKAVRVWPKFMVHFILWXXXXXXXXAGILLICFQKPATDGVGVCFIAFAIGNGL 266
                  WQ      P   V    W         GILL+        G+G  F+ FAI   L
Sbjct:   106 IASLAWQCIFIYNPSRAVKATFWLSPILTCSVGILLVLIGSAVDAGIGAVFVLFAITQSL 165

Query:   267 YACWVSQRIGFCCKVLIISLQPVSKFSDLNQPTYWMLGTGFLWMSFWILAVIGALNFY-- 324
             Y CW++ R+ +  K+L  SL      +   +     +    ++  F +  + GA +    
Sbjct:   166 YGCWITPRLEYTDKIL--SLATAFPPARTREVVCLSIIVSVVYSGFLVTGIGGATSTRTN 223

Query:   325 FPPLIIIALVLSLAWTTEVMRNVVNLTVCRVISLYYILGMQSSTQFCFQRALTQNLGSAC 384
                L I  +++SLAWT +V++NV  + + R   + +  G        F+  +    GS C
Sbjct:   224 LDILFISVIIISLAWTMQVIKNVQQVAISRARYVNFAHGEDMDAWNAFRITMKHLTGSIC 283

Query:   385 LGSLFVPTIEALRIVARGLNLLEGE-DEFMFSCAHCCLRIMESIFRCGNGWAYVQVTHFS 443
             +GS  VP I  +R   R +NL+ G  DE M+S A C   I   +   GN W +V V  + 
Sbjct:   284 VGSTLVPIIVFIRGSIRSVNLMSGSSDEVMYSGADCFSTIANKLITLGNRWGFVHVGTYD 343

Query:   444 FSF 446
               F
Sbjct:   344 KGF 346


>TAIR|locus:2100865 [details] [associations]
            symbol:AT3G04440 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF04515 GO:GO:0016021
            EMBL:CP002686 EMBL:AC022287 InterPro:IPR007603 PANTHER:PTHR12385
            HOGENOM:HOG000006411 ProtClustDB:CLSN2684097 IPI:IPI00533924
            RefSeq:NP_187094.1 UniGene:At.46096 UniGene:At.53182
            UniGene:At.70460 STRING:Q9M843 EnsemblPlants:AT3G04440.1
            GeneID:819599 KEGG:ath:AT3G04440 TAIR:At3g04440 InParanoid:Q9M843
            OMA:ANCYSAV PhylomeDB:Q9M843 ArrayExpress:Q9M843
            Genevestigator:Q9M843 Uniprot:Q9M843
        Length = 482

 Score = 268 (99.4 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 82/303 (27%), Positives = 125/303 (41%)

Query:   148 KISLFLFVLHMILAIGLVGFLVFK-GIQGLILASESIKRKEKRVLKYLLPQVEAAXXXXX 206
             K+   LF   +   + L+  LV    I+GLI AS          LK   P + A+     
Sbjct:    51 KLFRTLFKGLLFSQLTLISLLVIVLTIRGLISASTHHFH-----LKKWYPPLLASVAVSG 105

Query:   207 XXXXXWQKAVRVWPKFMVHFILWXXXXXXXXAGILLICFQKPATDGVGVCFIAFAIGNGL 266
                  WQ      P   V    W         GILL+        G+G  F+ FAI   L
Sbjct:   106 IASLAWQCIFIYNPSRAVKATFWLSPILTCSVGILLVLIGSAVDAGIGAVFVLFAITQSL 165

Query:   267 YACWVSQRIGFCCKVLIISLQPVSKFSDLNQPTYWMLGTGFLWMSFWILAVIGALNFY-- 324
             Y CW++ R+ +  K+L  SL      +   +     +    ++  F +  + GA +    
Sbjct:   166 YGCWITPRLEYTDKIL--SLATAFPPARTREVVCLSIIVSVVYSGFLVTGIGGATSTRTN 223

Query:   325 FPPLIIIALVLSLAWTTEVMRNVVNLTVCRVISLYYILGMQSSTQFCFQRALTQNLGSAC 384
                L I  +++SLAWT +V++NV  + + R   + +  G        F+  +    GS C
Sbjct:   224 LDILFISVIIISLAWTMQVIKNVQQVAISRARYVNFAHGEDMDAWNAFRITMKHLTGSIC 283

Query:   385 LGSLFVPTIEALRIVARGLNLLEGE-DEFMFSCAHCCLRIMESIFRCGNGWAYVQVTHFS 443
             +GS  VP I  +R   R +NL+ G  DE M+S A C   I   +   GN W +V V  + 
Sbjct:   284 VGSTLVPIIVFIRGSIRSVNLMSGSSDEVMYSGADCFSTIANKLITLGNRWGFVHVGTYD 343

Query:   444 FSF 446
               F
Sbjct:   344 KGF 346


>TAIR|locus:2031235 [details] [associations]
            symbol:AT1G25500 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] Pfam:PF04515 GO:GO:0016021 EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC079281 InterPro:IPR007603
            PANTHER:PTHR12385 OMA:GVYGSWY IPI:IPI00544178 PIR:C86385
            RefSeq:NP_173921.1 UniGene:At.43318 EnsemblPlants:AT1G25500.2
            GeneID:839136 KEGG:ath:AT1G25500 TAIR:At1g25500
            HOGENOM:HOG000005788 InParanoid:Q9C6L9 PhylomeDB:Q9C6L9
            ProtClustDB:CLSN2682624 Genevestigator:Q9C6L9 Uniprot:Q9C6L9
        Length = 488

 Score = 160 (61.4 bits), Expect = 8.4e-09, P = 8.4e-09
 Identities = 56/206 (27%), Positives = 87/206 (42%)

Query:   259 AFAIGN---GLYACWVSQRIGFCCKVLIISLQPVSKFSDLNQPTYWMLGTGFLWMSFWIL 315
             AFA+G+    LY   V  R+ F   VL  +L+ V     +    +       LWMS W  
Sbjct:   157 AFAVGSLLQFLYVISVIDRLPFTMLVLRKALKLVWGLPKVIMVAHAFTVVMLLWMSLWSF 216

Query:   316 AVIGALNFYFPP----LIIIALVLSLAWTTEVMRNVVNLTVC-RVISLYYILGMQSSTQF 370
                G +           +++ L +SL WT  V+ N V++ V   V  + +  G + S+  
Sbjct:   217 GAAGVVASSMGDEGRWWLLVVLSVSLFWTGAVLCNTVHVIVSGMVFHVLFHCGQEESSSL 276

Query:   371 -------CFQRALTQNLGSACLGSLFVPTIEALRIVARGLNLLEGEDEFMFSCAHCCLRI 423
                      + A+T + GS C GSLF   I  LR   RG       +E +  C      +
Sbjct:   277 PPSSLVDSLRYAVTTSFGSICYGSLFTAAIRTLRWEIRGFRSKICGNECLLCCVDFLFHL 336

Query:   424 MESIFRCGNGWAYVQVTHFSFSFRIS 449
             +E++ R  N +AYVQ+  +   F  S
Sbjct:   337 VETLVRFFNKYAYVQIAVYGKGFNKS 362


>DICTYBASE|DDB_G0274487 [details] [associations]
            symbol:DDB_G0274487 "Protein PNS1" species:44689
            "Dictyostelium discoideum" [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
            dictyBase:DDB_G0274487 Pfam:PF04515 GO:GO:0016021 EMBL:AAFI02000012
            eggNOG:NOG310633 InterPro:IPR007603 PANTHER:PTHR12385
            RefSeq:XP_644127.1 EnsemblProtists:DDB0167700 GeneID:8619557
            KEGG:ddi:DDB_G0274487 OMA:KFNDWPF Uniprot:Q869R1
        Length = 555

 Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 52/205 (25%), Positives = 93/205 (45%)

Query:   253 VGVCFIAFAIGNGLYACWVSQRIGFCCKVLIISLQPVSKFSDLNQPTYWMLGTGFLWMSF 312
             +G+ F   A    L+      RI F   +L  ++  + ++  + +  Y  +   F+W   
Sbjct:   239 LGIIFAIMAFFIILFYISCRSRIPFTATLLSNAVAIIKEYPSVIRAGYVSIFINFVWFIV 298

Query:   313 WILAVIGALNFYFPPL---IIIALVLSLAWTTEVMRNVVNLTVCRVISLYYI------LG 363
             W  A       Y   +   I I LV +L W   V++N ++ TV  +++ +Y       +G
Sbjct:   299 WGSAFARVNMVYTGAIQTCINIYLVFTLYWVFHVIKNTLHTTVSGLLATWYFCSGPNGVG 358

Query:   364 M-QSSTQFCFQRALTQNLGSACLGSLFVPTIEALRIVARGL-NLLEGEDEFMFSCAHCCL 421
             M  + T    +RALT + GS C GSL +  IE LR +++ + N      + +    +C L
Sbjct:   359 MPHNPTLGSARRALTTSFGSICFGSLIISLIETLRYLSQMMINNRNVVVKIIGYIFNCIL 418

Query:   422 RIMESIFRCGNGWAYVQVTHFSFSF 446
              ++ SI +  N +A+  V  +  SF
Sbjct:   419 SMLSSIVQFFNTYAFTHVAIYGKSF 443


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.330   0.142   0.453    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      451       344   0.00097  116 3  11 21  0.40    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  232 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.46u 0.12s 23.58t   Elapsed:  00:00:01
  Total cpu time:  23.46u 0.12s 23.58t   Elapsed:  00:00:01
  Start:  Mon May 20 19:02:45 2013   End:  Mon May 20 19:02:46 2013

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