BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>013030
MGSRFPSHQLSNGLYVSGRPEQPKERTPTMSSVAMPYTGGDIKKSGELGKMFDIPVDGSK
SRKSGPINNAPSRTGSFGGAASHSGPIMPNAASRASYSTSGPVSSGVTSGSASLKKSNSG
PLNKHGEPLKKSSGPQSGGVTPSGRQNSGPLAPALPTTGLITSGPISSAPLNSSGAPRKV
SGPLDSMGSMKIPSSVPHNQAITVLSQDEDFDFKRNFPKPIFCCVAALFGWNTFWGRKAI
ISYIARYPDAELRNAKNGQFVKISGVVTCGNVPLESSFQKVPRCIYTSTSLYEYRGWGSK
AANPTHRRFTWGLRSLERRAVDFYISDFQSGLRALVKTGYGARVTPYVDDSLAIDVNPGK
EELSPEFIRWLAERNLSSDDRIMRLKEGYIKEGSTVSVMGVVQRNDNVLMIVPPPEPITT
GCQWAKCIVPASLDGIVLRCEDASKNDVIPV

High Scoring Gene Products

Symbol, full name Information P value
AT1G16860 protein from Arabidopsis thaliana 1.0e-169
AT1G78880 protein from Arabidopsis thaliana 6.9e-145
AT4G22290 protein from Arabidopsis thaliana 1.3e-98

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  013030
        (451 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2015646 - symbol:AT1G16860 species:3702 "Arabi...   925  1.0e-169  2
TAIR|locus:2037533 - symbol:AT1G78880 "AT1G78880" species...   926  6.9e-145  2
TAIR|locus:2132075 - symbol:AT4G22290 "AT4G22290" species...   979  1.3e-98   1


>TAIR|locus:2015646 [details] [associations]
            symbol:AT1G16860 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=IDA] GO:GO:0016021
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 EMBL:AC051629
            EMBL:AY050887 EMBL:AY117261 EMBL:BT000665 IPI:IPI00537841
            PIR:H86303 RefSeq:NP_564009.1 UniGene:At.21790 PaxDb:Q9FZ45
            PRIDE:Q9FZ45 EnsemblPlants:AT1G16860.1 GeneID:838257
            KEGG:ath:AT1G16860 TAIR:At1g16860 eggNOG:NOG257904
            HOGENOM:HOG000242640 InParanoid:Q9FZ45 OMA:MIVPSSE PhylomeDB:Q9FZ45
            ProtClustDB:CLSN2679796 Genevestigator:Q9FZ45 Uniprot:Q9FZ45
        Length = 474

 Score = 925 (330.7 bits), Expect = 1.0e-169, Sum P(2) = 1.0e-169
 Identities = 170/231 (73%), Positives = 193/231 (83%)

Query:   221 IFCCVAALFGWNTFWGRKAIISYIARYPDAELRNAKNGQFVKISGVVTCGNVPLESSFQK 280
             +F  VAALF WN  WGR+ I  +IARYPDA+LR AKNGQ VK++GVVTCGNVPLESSF +
Sbjct:   244 LFTVVAALFIWNICWGRRGITDFIARYPDADLRTAKNGQHVKVTGVVTCGNVPLESSFHR 303

Query:   281 VPRCIYTSTSLYEYRGWGSKAANPTHRRFTWGLRSLERRAVDFYISDFQSGLRALVKTGY 340
             VPRC+YTST LYEYRGWGSK AN +HR FTWGLRS ER  VDFYISDFQSGLRALVKTG 
Sbjct:   304 VPRCVYTSTCLYEYRGWGSKPANSSHRHFTWGLRSSERHVVDFYISDFQSGLRALVKTGS 363

Query:   341 GARVTPYVDDSLAIDVNPGKEELSPEFIRWLAERNLSSDDRIMRLKEGYIKEGSTVSVMG 400
             GA+VTP VDDS+ ID   G E++SP+F+RWL ++NL+SDDRIMRLKEGYIKEGSTVSV+G
Sbjct:   364 GAKVTPLVDDSVVIDFKQGSEQVSPDFVRWLGKKNLTSDDRIMRLKEGYIKEGSTVSVIG 423

Query:   401 VVQRNDNVLMIVPPPEPITTGCQWAKCIVPASLDGIVLRCEDASKNDVIPV 451
             VVQRNDNVLMIVP  EP+  G QW +C  P SL+GIVLRCED+S  D IPV
Sbjct:   424 VVQRNDNVLMIVPSSEPLAAGWQWRRCTFPTSLEGIVLRCEDSSNVDAIPV 474

 Score = 747 (268.0 bits), Expect = 1.0e-169, Sum P(2) = 1.0e-169
 Identities = 154/231 (66%), Positives = 174/231 (75%)

Query:     1 MGSRFPSHQLSNGLYVSGRPEQPKERTPTMSSVAMPYTGGDIKKSGELGKMFDIPVDGSK 60
             MGSR+PSHQLSNGL+VSGRPEQPKER PTMS+VAMPYTGGDIK+SGELGKMFDIP DG+K
Sbjct:     1 MGSRYPSHQLSNGLFVSGRPEQPKERAPTMSAVAMPYTGGDIKRSGELGKMFDIPADGTK 60

Query:    61 SRKSGPINNAPSRTGSFGGAASHSGPIMPNAASRXXXXXXXXXXXXXXXXXXXLKKSNSG 120
             SRKSGPI  APSR+GSF G A  SGP  P A  R                   +KK+NSG
Sbjct:    61 SRKSGPIPGAPSRSGSFAGTAQ-SGPGAPMATGRMSGSLASAGSVS-------MKKTNSG 112

Query:   121 PLNKHGEPLKKSSGPQSGGVTPSGRQNSGPLAPALPTTGLITSGPISSAPLNSSGAPRKV 180
             PL+KHGEPLKKSSGPQSGGVT   RQNSG + P LP TGLITSGPI+S PLNSSGAPRKV
Sbjct:   113 PLSKHGEPLKKSSGPQSGGVT---RQNSGSI-PILPATGLITSGPITSGPLNSSGAPRKV 168

Query:   181 SGPLDSMGSMK--IPSSVPHNQAITVLSQDEDFDFKRNFPKPIFCCVAALF 229
             SGPLDS G MK  +P+ V HNQA+T L  ++DF   ++FPKP+   V  +F
Sbjct:   169 SGPLDSSGLMKSHMPTVV-HNQAVTTLGPEDDFSCLKSFPKPVLWLVVLIF 218


>TAIR|locus:2037533 [details] [associations]
            symbol:AT1G78880 "AT1G78880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            GO:GO:0006508 GO:GO:0008233 EMBL:AC005679 HOGENOM:HOG000242640
            ProtClustDB:CLSN2679796 EMBL:AY072176 EMBL:AY096686 EMBL:AY120734
            EMBL:BT000364 IPI:IPI00537430 PIR:C96818 RefSeq:NP_178009.1
            UniGene:At.21193 PaxDb:Q9ZVA7 PRIDE:Q9ZVA7
            EnsemblPlants:AT1G78880.1 GeneID:844225 KEGG:ath:AT1G78880
            TAIR:At1g78880 eggNOG:NOG292696 InParanoid:Q9ZVA7 OMA:WNISCER
            PhylomeDB:Q9ZVA7 ArrayExpress:Q9ZVA7 Genevestigator:Q9ZVA7
            Uniprot:Q9ZVA7
        Length = 468

 Score = 926 (331.0 bits), Expect = 6.9e-145, Sum P(2) = 6.9e-145
 Identities = 171/231 (74%), Positives = 195/231 (84%)

Query:   221 IFCCVAALFGWNTFWGRKAIISYIARYPDAELRNAKNGQFVKISGVVTCGNVPLESSFQK 280
             +F  VAALF WN    R+ I  +IARYPDA+LR AKNGQ+VK++GVVTCGNVPLESSF +
Sbjct:   238 LFTVVAALFIWNISCERRGITDFIARYPDADLRTAKNGQYVKVTGVVTCGNVPLESSFHR 297

Query:   281 VPRCIYTSTSLYEYRGWGSKAANPTHRRFTWGLRSLERRAVDFYISDFQSGLRALVKTGY 340
             VPRC+YTST LYEYRGWGSK AN +HRRFTWGLRS ER  VDFYISDFQSGLRALVKTG 
Sbjct:   298 VPRCVYTSTCLYEYRGWGSKPANASHRRFTWGLRSAERHVVDFYISDFQSGLRALVKTGN 357

Query:   341 GARVTPYVDDSLAIDVNPGKEELSPEFIRWLAERNLSSDDRIMRLKEGYIKEGSTVSVMG 400
             GA+VTP VDDS+ ID  PG E+ SP+F+RWL ++NL++DDRIMRLKEGYIKEGSTVSV+G
Sbjct:   358 GAKVTPLVDDSVVIDFKPGNEQASPDFVRWLGKKNLTNDDRIMRLKEGYIKEGSTVSVIG 417

Query:   401 VVQRNDNVLMIVPPPEPITTGCQWAKCIVPASLDGIVLRCEDASKNDVIPV 451
             VVQRNDNVLMIVP  EP+  G QW+KC  PASL+GIVLRCED+S  D IPV
Sbjct:   418 VVQRNDNVLMIVPTTEPLAAGWQWSKCTFPASLEGIVLRCEDSSNVDAIPV 468

 Score = 511 (184.9 bits), Expect = 6.9e-145, Sum P(2) = 6.9e-145
 Identities = 118/213 (55%), Positives = 139/213 (65%)

Query:     1 MGSRFPSHQLSNGLYVSGRPEQPKERTPTMSSVAMPYTGGDIKKSGELGKMFDIPVDGSK 60
             MGSR+ SHQLSNGL+VSGRPEQPKE+ PTMSSVAMPYTGGDIKKSGELGKMFDIP DG+K
Sbjct:     1 MGSRYASHQLSNGLFVSGRPEQPKEKPPTMSSVAMPYTGGDIKKSGELGKMFDIPTDGTK 60

Query:    61 SRKSGPINNAPSRTGSFGGAASHSGPIMPNAASRXXXXXXXXXXXXXXXXXXXLKKSNSG 120
             SRKSGPI    SR+G+       SGP+ PNA  R                   +KK+NSG
Sbjct:    61 SRKSGPITGGSSRSGA------QSGPV-PNATGRMSGNLASAGSNS-------MKKTNSG 106

Query:   121 PLNKHGEPLKKSSGPQSGGVTPSGRQNSGPLAPA--LPTTGLITSGPISS--APLNSSGA 176
             PL+KHGEPLKKSSGPQSGGVT        P+ P   L T+G ITSGP++S  AP   SG 
Sbjct:   107 PLSKHGEPLKKSSGPQSGGVTRQN-SGPIPILPTTGLITSGPITSGPLNSSGAPRKISG- 164

Query:   177 PRKVSGPLDSMGSMKIPSSVPHNQAITVLSQDE 209
             P   SG + +     +PS V +    T+  +D+
Sbjct:   165 PLDYSGSMKT----HMPSVVHNQAVTTLAPEDD 193

 Score = 417 (151.9 bits), Expect = 5.9e-135, Sum P(2) = 5.9e-135
 Identities = 98/191 (51%), Positives = 119/191 (62%)

Query:    54 IPVDGSKSRKSG--------PINNAPSR-----TGSFGGAASHSGPIMPNAASRXXXXXX 100
             +P  G   +KSG        P +   SR     TG    + + SGP+ PNA  R      
Sbjct:    35 MPYTGGDIKKSGELGKMFDIPTDGTKSRKSGPITGGSSRSGAQSGPV-PNATGRMSGNLA 93

Query:   101 XXXXXXXXXXXXXLKKSNSGPLNKHGEPLKKSSGPQSGGVTPSGRQNSGPLAPALPTTGL 160
                          +KK+NSGPL+KHGEPLKKSSGPQSGGVT   RQNSGP+ P LPTTGL
Sbjct:    94 SAGSNS-------MKKTNSGPLSKHGEPLKKSSGPQSGGVT---RQNSGPI-PILPTTGL 142

Query:   161 ITSGPISSAPLNSSGAPRKVSGPLDSMGSMK--IPSSVPHNQAITVLSQDEDFDFKRNFP 218
             ITSGPI+S PLNSSGAPRK+SGPLD  GSMK  +PS V HNQA+T L+ ++DF   ++FP
Sbjct:   143 ITSGPITSGPLNSSGAPRKISGPLDYSGSMKTHMPSVV-HNQAVTTLAPEDDFSCMKSFP 201

Query:   219 KPIFCCVAALF 229
             KP+   V  +F
Sbjct:   202 KPVLWLVILIF 212


>TAIR|locus:2132075 [details] [associations]
            symbol:AT4G22290 "AT4G22290" species:3702 "Arabidopsis
            thaliana" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=ISS] EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0006508 GO:GO:0008233 UniGene:At.47267 HOGENOM:HOG000242640
            ProtClustDB:CLSN2679796 EMBL:AY140104 EMBL:BT006592 IPI:IPI00534218
            RefSeq:NP_193960.2 UniGene:At.71029 PRIDE:Q8L6X7
            EnsemblPlants:AT4G22290.1 GeneID:828324 KEGG:ath:AT4G22290
            TAIR:At4g22290 InParanoid:Q8L6X7 OMA:AGRIQSH PhylomeDB:Q8L6X7
            Genevestigator:Q8L6X7 Uniprot:Q8L6X7
        Length = 445

 Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
 Identities = 215/465 (46%), Positives = 280/465 (60%)

Query:     1 MGSRFPSHQLSNGLYVSGRPEQPKERTPTMSSVAMPYTGGDIKKSGELGKMFDIPVDGSK 60
             M  R  SHQL NGLYVSG+ EQPKER PTM++ A+PYTGGDIKKSGELG+MFDI V  S 
Sbjct:     1 MAGRIQSHQLPNGLYVSGKLEQPKERPPTMAARAVPYTGGDIKKSGELGRMFDISVVDSA 60

Query:    61 SRKSGPINNAPSRTG--SFGGAASHSGPIMPNAASRXXXXXXXXXXXXXXXXXXXLKKSN 118
             S +  P    P   G  S GG +    P  P  +                         N
Sbjct:    61 SFQGPP----PLIVGGNSSGGTSRLQAP--PRVSGSSSNPNSGSVRSG----------PN 104

Query:   119 SGPLNKHGEPLKKSSGPQSGGVTPSGRQNSGPLAPALPTTGLIT---SGPISSAPLNSSG 175
             SG + K   PL +   P +G +T     +SGP+      +G +    S   SS P   S 
Sbjct:   105 SGSVKKFSGPLSQLQ-P-TGLITSGSLGSSGPILSGSRRSGQLDHQLSNLASSKPKYGSS 162

Query:   176 APRKVSGPLDSMGSMKIPSSVPHNQAITVLSQDEDFDFKR-NFPKPIF--------CCVA 226
                    P+  +G  K+P ++     I          F      KP+         C   
Sbjct:   163 VTSLNVDPV-RVG-FKVPKAMVWAVLIVAAMGLLVGAFLTVAVKKPVVIAAVLAAVCPAI 220

Query:   227 ALFGWNTFWGRKAIISYIARYPDAELRNAKNGQFVKISGVVTCGNVPLESSFQKVPRCIY 286
              +  WN  W RK ++S+I +YPDAELR A +GQFVK++GVVTCG++PLESSFQ+ PRC+Y
Sbjct:   221 VVLVWNCVWRRKGLLSFIKKYPDAELRGAIDGQFVKVTGVVTCGSIPLESSFQRTPRCVY 280

Query:   287 TSTSLYEYRGWGSKAANPTHRRFTWGLRSLERRAVDFYISDFQSGLRALVKTGYGARVTP 346
              ST LYEY+G+G K+ANP HR F+WG R  E+   DFYISDFQSGLRALVK GYG++V+P
Sbjct:   281 VSTELYEYKGFGGKSANPKHRCFSWGSRHAEKYVSDFYISDFQSGLRALVKAGYGSKVSP 340

Query:   347 YVDDSLAIDVNPGKEELSPEFIRWLAERNLSSDDRIMRLKEGYIKEGSTVSVMGVVQRND 406
             +V  +   +V    ++LSP F++WL++RNLS+DDR+MRLKEGYIKEGSTVSVMG+V+R+D
Sbjct:   341 FVKPATVANVTTQNKDLSPSFLKWLSDRNLSADDRVMRLKEGYIKEGSTVSVMGMVRRHD 400

Query:   407 NVLMIVPPPEPITTGCQWAKCIVPASLDGIVLRCEDASKNDVIPV 451
             NVLMIVPP E +++GC+W  C+ P   DG+++ C+D    DVIPV
Sbjct:   401 NVLMIVPPAEAVSSGCRWWHCLFPTYADGLIITCDDNQNADVIPV 445


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.133   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      451       432   0.00086  118 3  11 23  0.45    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  262 KB (2139 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  39.74u 0.18s 39.92t   Elapsed:  00:00:01
  Total cpu time:  39.74u 0.18s 39.92t   Elapsed:  00:00:01
  Start:  Thu May  9 13:43:55 2013   End:  Thu May  9 13:43:56 2013

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