BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013035
(451 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147784859|emb|CAN77495.1| hypothetical protein VITISV_011897 [Vitis vinifera]
Length = 1622
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/448 (87%), Positives = 423/448 (94%)
Query: 1 MYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ 60
M++NRFLNF RL SVLNNAAE+FFKSEIRRRLFVTAVL+VISR+GYFIPLPGFDRRL+P+
Sbjct: 953 MFRNRFLNFARLGSVLNNAAETFFKSEIRRRLFVTAVLLVISRVGYFIPLPGFDRRLMPE 1012
Query: 61 DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGH 120
DYLSFVSGSVDELGDF ELKLS FQLGISPQI ASILMQVLCH+VPSLV+LRKEGLDGH
Sbjct: 1013 DYLSFVSGSVDELGDFAGELKLSLFQLGISPQIAASILMQVLCHVVPSLVKLRKEGLDGH 1072
Query: 121 EKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICD 180
EKIKSYIWWISLGFAILEA+++ACYSL YS+YAASH VKHVMVT LVCGAMTM+WICD
Sbjct: 1073 EKIKSYIWWISLGFAILEALVLACYSLTYSVYAASHRVKHVMVTTLFLVCGAMTMTWICD 1132
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
ISESGFGQGSSLIICVGILTGYT+TLYKML QL G +V WWP++L +LGVFTIVTMWAV
Sbjct: 1133 KISESGFGQGSSLIICVGILTGYTDTLYKMLVQLSGGAVSWWPYILAVLGVFTIVTMWAV 1192
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
VVTEGCRK+KLQYYGFKLASA R+DSPITEVEPYIPFNINPSGMQPVLTT YLLAFPSIL
Sbjct: 1193 VVTEGCRKIKLQYYGFKLASATRDDSPITEVEPYIPFNINPSGMQPVLTTAYLLAFPSIL 1252
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
AS+L SPFW+HVKEILNPETS+GA PWVYY+IYAFFVF+FNIFDIAN+PKEIADYLNKMG
Sbjct: 1253 ASLLRSPFWEHVKEILNPETSIGAEPWVYYSIYAFFVFVFNIFDIANMPKEIADYLNKMG 1312
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
ARIPN+KPGKATI YLTKIQASTRFWGGLLLS LAT STILDHYLRRIN+GFSIGFTSVL
Sbjct: 1313 ARIPNIKPGKATIAYLTKIQASTRFWGGLLLSFLATMSTILDHYLRRINQGFSIGFTSVL 1372
Query: 421 IIVGSIIELRRSYQAYNVMPSLSKALRR 448
IIVGSIIELRRSYQAYNVMP LSKALRR
Sbjct: 1373 IIVGSIIELRRSYQAYNVMPDLSKALRR 1400
>gi|225437006|ref|XP_002272499.1| PREDICTED: preprotein translocase subunit secY-like [Vitis
vinifera]
Length = 668
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/451 (88%), Positives = 426/451 (94%)
Query: 1 MYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ 60
M++NRFLNF RL SVLNNAAESFFKSEIRRRLFVTAVL+VISR+GYFIPLPGFDRRL+P+
Sbjct: 218 MFRNRFLNFARLGSVLNNAAESFFKSEIRRRLFVTAVLLVISRVGYFIPLPGFDRRLMPE 277
Query: 61 DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGH 120
DYLSFVSGSVDELGDF ELKLS FQLGISPQI ASILMQVLCH+VPSLV+LRKEGLDGH
Sbjct: 278 DYLSFVSGSVDELGDFAGELKLSLFQLGISPQIAASILMQVLCHVVPSLVKLRKEGLDGH 337
Query: 121 EKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICD 180
EKIKSYIWWISLGFAILEA+++ACYSL YS+YAASH VKHVMVT LVCGAMTM+WICD
Sbjct: 338 EKIKSYIWWISLGFAILEALVLACYSLTYSVYAASHRVKHVMVTTLFLVCGAMTMTWICD 397
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
ISESGFGQGSSLIICVGILTGYT+TLYKML QL G +V WWP++L +LGVFTIVTMWAV
Sbjct: 398 KISESGFGQGSSLIICVGILTGYTDTLYKMLVQLSGGAVSWWPYILAVLGVFTIVTMWAV 457
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
VVTEGCRK+KLQYYGFKLASA R+DSPITEVEPYIPFNINPSGMQPVLTT YLLAFPSIL
Sbjct: 458 VVTEGCRKIKLQYYGFKLASATRDDSPITEVEPYIPFNINPSGMQPVLTTAYLLAFPSIL 517
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
AS+L SPFW+H+KEILNPETS+GA PWVYY+IYAFFVF+FNIFDIAN+PKEIADYLNKMG
Sbjct: 518 ASLLRSPFWEHIKEILNPETSIGAEPWVYYSIYAFFVFVFNIFDIANMPKEIADYLNKMG 577
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
ARIPN+KPGKATI YLTKIQASTRFWGGLLLS LAT STILDHYLRRIN+GFSIGFTSVL
Sbjct: 578 ARIPNIKPGKATIAYLTKIQASTRFWGGLLLSFLATMSTILDHYLRRINQGFSIGFTSVL 637
Query: 421 IIVGSIIELRRSYQAYNVMPSLSKALRRYGV 451
IIVGSIIELRRSYQAYNVMP LSKALRRYGV
Sbjct: 638 IIVGSIIELRRSYQAYNVMPDLSKALRRYGV 668
>gi|296086738|emb|CBI32373.3| unnamed protein product [Vitis vinifera]
Length = 613
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/451 (88%), Positives = 426/451 (94%)
Query: 1 MYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ 60
M++NRFLNF RL SVLNNAAESFFKSEIRRRLFVTAVL+VISR+GYFIPLPGFDRRL+P+
Sbjct: 163 MFRNRFLNFARLGSVLNNAAESFFKSEIRRRLFVTAVLLVISRVGYFIPLPGFDRRLMPE 222
Query: 61 DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGH 120
DYLSFVSGSVDELGDF ELKLS FQLGISPQI ASILMQVLCH+VPSLV+LRKEGLDGH
Sbjct: 223 DYLSFVSGSVDELGDFAGELKLSLFQLGISPQIAASILMQVLCHVVPSLVKLRKEGLDGH 282
Query: 121 EKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICD 180
EKIKSYIWWISLGFAILEA+++ACYSL YS+YAASH VKHVMVT LVCGAMTM+WICD
Sbjct: 283 EKIKSYIWWISLGFAILEALVLACYSLTYSVYAASHRVKHVMVTTLFLVCGAMTMTWICD 342
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
ISESGFGQGSSLIICVGILTGYT+TLYKML QL G +V WWP++L +LGVFTIVTMWAV
Sbjct: 343 KISESGFGQGSSLIICVGILTGYTDTLYKMLVQLSGGAVSWWPYILAVLGVFTIVTMWAV 402
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
VVTEGCRK+KLQYYGFKLASA R+DSPITEVEPYIPFNINPSGMQPVLTT YLLAFPSIL
Sbjct: 403 VVTEGCRKIKLQYYGFKLASATRDDSPITEVEPYIPFNINPSGMQPVLTTAYLLAFPSIL 462
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
AS+L SPFW+H+KEILNPETS+GA PWVYY+IYAFFVF+FNIFDIAN+PKEIADYLNKMG
Sbjct: 463 ASLLRSPFWEHIKEILNPETSIGAEPWVYYSIYAFFVFVFNIFDIANMPKEIADYLNKMG 522
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
ARIPN+KPGKATI YLTKIQASTRFWGGLLLS LAT STILDHYLRRIN+GFSIGFTSVL
Sbjct: 523 ARIPNIKPGKATIAYLTKIQASTRFWGGLLLSFLATMSTILDHYLRRINQGFSIGFTSVL 582
Query: 421 IIVGSIIELRRSYQAYNVMPSLSKALRRYGV 451
IIVGSIIELRRSYQAYNVMP LSKALRRYGV
Sbjct: 583 IIVGSIIELRRSYQAYNVMPDLSKALRRYGV 613
>gi|449444663|ref|XP_004140093.1| PREDICTED: preprotein translocase subunit SCY2, chloroplastic-like
[Cucumis sativus]
Length = 494
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/450 (86%), Positives = 430/450 (95%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
++NRFLN +RL SVLNNAAESFFKSEIRRRLFVTAVLIVISR+GYFIPLPGFDRRLIPQD
Sbjct: 45 FRNRFLNLVRLRSVLNNAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQD 104
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
YLSFVSGSVDELGDF E+K+SFFQLGISPQI+ASI+MQVLCHI+PSLV+LRKEGLDG E
Sbjct: 105 YLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRKEGLDGQE 164
Query: 122 KIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 181
KIKSYIWW+SLGFAILEA++++CYSLPYS+Y A+H VKHVMVT+FLLVCGAMT++WICDT
Sbjct: 165 KIKSYIWWMSLGFAILEALVLSCYSLPYSVYVANHRVKHVMVTSFLLVCGAMTITWICDT 224
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
ISESGFGQGSSLIICVGILTGYTETLYKMLSQL G +V WWP++L LLG+FT+VTMWAVV
Sbjct: 225 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGGAVVWWPYVLALLGIFTVVTMWAVV 284
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
VTEGCRK+KLQYYGFKLASAAREDSPITEVEPYIPFNINP+GMQP+LTTTYLLAFPSILA
Sbjct: 285 VTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPSILA 344
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGA 361
S+L S FW+HVKEILNPE+S+GA PWVYY IYA FVFLFNIFDIANLPKEI+DYLNKMGA
Sbjct: 345 SLLNSTFWEHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEISDYLNKMGA 404
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
RIPN+KPGKA+IEYLTKIQASTRFWGGLLLS LAT+S++LDHYLR +N GF+IGFTSVLI
Sbjct: 405 RIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTSVLI 464
Query: 422 IVGSIIELRRSYQAYNVMPSLSKALRRYGV 451
IVGSIIELRRSYQAYNVMPSLS ALRRYGV
Sbjct: 465 IVGSIIELRRSYQAYNVMPSLSNALRRYGV 494
>gi|255559472|ref|XP_002520756.1| protein translocase secy subunit, putative [Ricinus communis]
gi|223540141|gb|EEF41718.1| protein translocase secy subunit, putative [Ricinus communis]
Length = 538
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/440 (86%), Positives = 413/440 (93%), Gaps = 4/440 (0%)
Query: 1 MYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ 60
MY+NRFL+F+R+SSV NNAAESFFKSEIRRRLFVTAVLIVISR+GY+IPLPGFDRRLIPQ
Sbjct: 55 MYRNRFLDFVRISSVFNNAAESFFKSEIRRRLFVTAVLIVISRVGYYIPLPGFDRRLIPQ 114
Query: 61 DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGH 120
DYLSF+SGSVDELGD AELKLSFFQLGISPQI+ASILMQVLCH+VPSLV+LRKEGLDGH
Sbjct: 115 DYLSFISGSVDELGDLTAELKLSFFQLGISPQILASILMQVLCHVVPSLVKLRKEGLDGH 174
Query: 121 EKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICD 180
EKIKSYIWW+SLGFA+LEAV+VACYSLPYSIYAA+H VKHVMVTA LL CGAMT++WICD
Sbjct: 175 EKIKSYIWWLSLGFAMLEAVVVACYSLPYSIYAATHRVKHVMVTALLLTCGAMTVTWICD 234
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
TISESGFGQGSSLIICVGILTGYT+TLYKML QL GS+V W P+ML +LGVFT+VTMWAV
Sbjct: 235 TISESGFGQGSSLIICVGILTGYTDTLYKMLCQLSGSAVSWLPYMLAVLGVFTVVTMWAV 294
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
VVTEGCRK+KLQYYGFKLASAAR+DSP+TEVEPYIPFNINPSGMQPVLTTTYLLA PSIL
Sbjct: 295 VVTEGCRKIKLQYYGFKLASAARDDSPMTEVEPYIPFNINPSGMQPVLTTTYLLAIPSIL 354
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
A ILGSPFW+HVKEILNPETS+GA PWVYY+IY FFVFLFNIFDIANLPKEI+DYLNKMG
Sbjct: 355 AGILGSPFWEHVKEILNPETSLGAAPWVYYSIYGFFVFLFNIFDIANLPKEISDYLNKMG 414
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
ARIPNVKPGKATIEYLT IQASTRFWGGLLLSILAT+STILDHYLRRINEGF+IGFTSVL
Sbjct: 415 ARIPNVKPGKATIEYLTNIQASTRFWGGLLLSILATTSTILDHYLRRINEGFAIGFTSVL 474
Query: 421 II----VGSIIELRRSYQAY 436
II V +++RS +
Sbjct: 475 IIKLHMVAERYDIKRSVDNF 494
>gi|224066513|ref|XP_002302117.1| SecY protein [Populus trichocarpa]
gi|222843843|gb|EEE81390.1| SecY protein [Populus trichocarpa]
Length = 552
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/451 (85%), Positives = 415/451 (92%), Gaps = 19/451 (4%)
Query: 1 MYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ 60
M++NRFLNF R++SV+N+AAESFFKSEIRRRLFVTAVLIVI R+GY+IPLPGFDRRLIP+
Sbjct: 121 MFRNRFLNFGRMNSVINSAAESFFKSEIRRRLFVTAVLIVIGRVGYYIPLPGFDRRLIPR 180
Query: 61 DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGH 120
DYLSFV+GSVDEL DF ELKLSFFQLGISPQI+ASILMQVLCH+VPSLV+LRKEGLDGH
Sbjct: 181 DYLSFVTGSVDEL-DFSTELKLSFFQLGISPQILASILMQVLCHVVPSLVKLRKEGLDGH 239
Query: 121 EKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICD 180
EKIKSYIWWISLGFAI EA+IVACYSLPYS+YAAS VKHVMVTA LLVCGAMTM+WICD
Sbjct: 240 EKIKSYIWWISLGFAIFEAIIVACYSLPYSVYAASQRVKHVMVTALLLVCGAMTMTWICD 299
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
TISESGFGQGSSLIICVGILTGYTETLYKMLSQL GS+ WWP+M +LGVFTIVTMWAV
Sbjct: 300 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGSAASWWPYMFAVLGVFTIVTMWAV 359
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
VVTEGCRK+KLQYYGFKLASAAR+DSPITEVEPYIPFNINPSGMQP+LTTTYLLA PSIL
Sbjct: 360 VVTEGCRKIKLQYYGFKLASAARDDSPITEVEPYIPFNINPSGMQPLLTTTYLLAVPSIL 419
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
A ILGSPFW+ +KEILNPETS+GA PW ANLPKEIADYLNKMG
Sbjct: 420 AGILGSPFWERIKEILNPETSIGAEPW------------------ANLPKEIADYLNKMG 461
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
ARIPNVKPGKATIEYLTKIQASTRFWGGLLLS+LAT+STILDHYLRRINEGF+IGFTSVL
Sbjct: 462 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSVLATTSTILDHYLRRINEGFAIGFTSVL 521
Query: 421 IIVGSIIELRRSYQAYNVMPSLSKALRRYGV 451
IIVGSIIELRRSYQAYNVMPSLSKALRRYGV
Sbjct: 522 IIVGSIIELRRSYQAYNVMPSLSKALRRYGV 552
>gi|240254559|ref|NP_180711.4| secY protein transport-like protein [Arabidopsis thaliana]
gi|363805540|sp|F4IQV7.1|SCY2_ARATH RecName: Full=Preprotein translocase subunit SCY2, chloroplastic;
AltName: Full=Protein EMBRYO DEFECTIVE 2289; Flags:
Precursor
gi|330253463|gb|AEC08557.1| secY protein transport-like protein [Arabidopsis thaliana]
Length = 575
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/450 (83%), Positives = 426/450 (94%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
++NRFL+F+R+SSVLN AAE FFKSEIRRRLFVTAVL+V+SR+GYFIPLPGFDRRLIPQD
Sbjct: 126 FRNRFLDFVRISSVLNTAAERFFKSEIRRRLFVTAVLLVLSRVGYFIPLPGFDRRLIPQD 185
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
YLSFVSGSV+ELG+FGAE+KLS FQLG+SPQI+ASI+MQVLCH++PSLV+LRKEGLDGHE
Sbjct: 186 YLSFVSGSVEELGEFGAEIKLSLFQLGLSPQIIASIIMQVLCHVLPSLVKLRKEGLDGHE 245
Query: 122 KIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 181
KIKSYIWW+S FAI+EA++VA SL YS++AA+ VKHVM+T+ LLVCGAMTM+W+CDT
Sbjct: 246 KIKSYIWWLSFFFAIVEALVVAYTSLQYSVFAATAQVKHVMMTSSLLVCGAMTMTWLCDT 305
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
ISESGFG GSSLIICVGILTGYTETL+KML+Q+ GS W P++LGLLG+FT+VTM+AVV
Sbjct: 306 ISESGFGHGSSLIICVGILTGYTETLHKMLNQISGSFSNWLPYLLGLLGIFTVVTMFAVV 365
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
VTEGCRK+KLQYYGFKLASA+RE SPITEVEPYIPFNINP+GMQPVLTTTYLLAFPSILA
Sbjct: 366 VTEGCRKIKLQYYGFKLASASREGSPITEVEPYIPFNINPAGMQPVLTTTYLLAFPSILA 425
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGA 361
SILGSPF ++KEILNPE++VGA PWVYY+IYAFFVFLFNIFDIANLPKEIADYLNKMGA
Sbjct: 426 SILGSPFLLNMKEILNPESTVGAPPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGA 485
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
RIPN+KPGKATIEYLTKIQASTRFWGGLLLS LAT+ST+LDHYLR IN+GFSIGFTSVLI
Sbjct: 486 RIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATASTVLDHYLRSINQGFSIGFTSVLI 545
Query: 422 IVGSIIELRRSYQAYNVMPSLSKALRRYGV 451
IVGSIIELRRSY AYNVMPSLSKAL+RYGV
Sbjct: 546 IVGSIIELRRSYHAYNVMPSLSKALKRYGV 575
>gi|356503539|ref|XP_003520565.1| PREDICTED: preprotein translocase subunit secY-like [Glycine max]
Length = 546
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/452 (82%), Positives = 414/452 (91%), Gaps = 19/452 (4%)
Query: 1 MYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ 60
M++NRFLNF RL SV+N AAESFFKSEIRRRLFVTA+LIVISR+GYFIPLPGFDRRLIP+
Sbjct: 113 MFRNRFLNFARLGSVINGAAESFFKSEIRRRLFVTAMLIVISRVGYFIPLPGFDRRLIPE 172
Query: 61 DYLSFVSGS-VDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDG 119
DYLSFV+GS VDELGDF AELKLS FQLGISPQI+ASI+MQVLCH+VPSLV+LRKEGLDG
Sbjct: 173 DYLSFVAGSSVDELGDFTAELKLSIFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDG 232
Query: 120 HEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWIC 179
HEKIKSYIWW+S GFAILEA+IVACYSLPYSIYAA++ VKHVMVT+ LLVCGAMT++WIC
Sbjct: 233 HEKIKSYIWWMSFGFAILEALIVACYSLPYSIYAATYRVKHVMVTSILLVCGAMTITWIC 292
Query: 180 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 239
DTISESGFGQGSSLIICVGILTGY ETLYKML+QL S+V WWP++L +LG+FTIVTMWA
Sbjct: 293 DTISESGFGQGSSLIICVGILTGYMETLYKMLTQLSVSAVSWWPYVLAVLGIFTIVTMWA 352
Query: 240 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
VVVTEGCRKVKLQYYGFKLASAARE SPITEVEPYIPFNINP+GMQPVLTT+YLLAFPSI
Sbjct: 353 VVVTEGCRKVKLQYYGFKLASAAREHSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSI 412
Query: 300 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKM 359
LAS+L SPFW+H KE+LNPETSVGA PW AN+PKEIADYLNKM
Sbjct: 413 LASLLRSPFWEHAKEMLNPETSVGAEPW------------------ANMPKEIADYLNKM 454
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
GARIPN+KPGKATIEYL+K+QASTRFWGGLLLS+LAT+S++LDHYLRR+N GF+IGFTSV
Sbjct: 455 GARIPNIKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSVLDHYLRRVNAGFAIGFTSV 514
Query: 420 LIIVGSIIELRRSYQAYNVMPSLSKALRRYGV 451
LIIVGSIIELRRSYQAYNVMPSLS ALRRYGV
Sbjct: 515 LIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 546
>gi|297822899|ref|XP_002879332.1| hypothetical protein ARALYDRAFT_320901 [Arabidopsis lyrata subsp.
lyrata]
gi|297325171|gb|EFH55591.1| hypothetical protein ARALYDRAFT_320901 [Arabidopsis lyrata subsp.
lyrata]
Length = 567
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/457 (80%), Positives = 410/457 (89%), Gaps = 15/457 (3%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
++NRFL+F+R+SSVLN AAE FFKSEIRRRLFVTAVL+V+SR+GYFIPLPGFDRRLIPQD
Sbjct: 119 FRNRFLDFVRISSVLNTAAERFFKSEIRRRLFVTAVLLVLSRVGYFIPLPGFDRRLIPQD 178
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
YLSFVSGSV E FGAE+KLS FQLG+SPQI+ASI+MQVLCH++PSLV+LRKEGLDGHE
Sbjct: 179 YLSFVSGSVGECSHFGAEIKLSLFQLGLSPQIIASIIMQVLCHVLPSLVKLRKEGLDGHE 238
Query: 122 KIKSYIWWISLGFAILEAVIVACYS------LPY-SIYAASHSVKHVMVTAFLLVCGAMT 174
KIKSY+ + A++ CYS L + SI++ HVM+TA LLVCGAMT
Sbjct: 239 KIKSYMCMV--------AIVSLCYSGSISGGLHFASIFSFCSHCPHVMMTASLLVCGAMT 290
Query: 175 MSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI 234
M+W+CDTISESGFG GSSLIICVGILTGYTETL+KML+Q+ GS W P++LGLLG+FT+
Sbjct: 291 MTWLCDTISESGFGHGSSLIICVGILTGYTETLHKMLNQISGSFSNWLPYLLGLLGIFTV 350
Query: 235 VTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLL 294
VTM+AVVVTEGCRK+KLQYYGFKLASA+RE SPITEVEPYIPFNINP+GMQPVLTTTYLL
Sbjct: 351 VTMFAVVVTEGCRKIKLQYYGFKLASASREGSPITEVEPYIPFNINPAGMQPVLTTTYLL 410
Query: 295 AFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIAD 354
AFPSILASILGSPF HVKEILNPE++VGA PWVYY+IYAFFVFLFNIFDIANLPKEIAD
Sbjct: 411 AFPSILASILGSPFLVHVKEILNPESTVGAPPWVYYSIYAFFVFLFNIFDIANLPKEIAD 470
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 414
YLNKMGARIPN+KPGKATIEYLTKIQASTRFWGGLLLS LAT+ST+LDHYLR IN+GFSI
Sbjct: 471 YLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATASTVLDHYLRSINQGFSI 530
Query: 415 GFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRYGV 451
GFTSVLIIVGSIIELRRSY AYNVMPSLSKAL+RYGV
Sbjct: 531 GFTSVLIIVGSIIELRRSYHAYNVMPSLSKALKRYGV 567
>gi|4582448|gb|AAD24832.1| putative preprotein translocase SECY protein [Arabidopsis thaliana]
Length = 556
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/450 (80%), Positives = 406/450 (90%), Gaps = 1/450 (0%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
++NRFL+F+R+SSVLN AAE FFKSEIRRRLFVTAVL+V+SR+GYFIPLPGFDRRLIPQD
Sbjct: 108 FRNRFLDFVRISSVLNTAAERFFKSEIRRRLFVTAVLLVLSRVGYFIPLPGFDRRLIPQD 167
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
YLSFVSGSV E FGAE+KLS FQLG+SPQI+ASI+MQVLCH++PSLV+LRKEGLDGHE
Sbjct: 168 YLSFVSGSVGECSHFGAEIKLSLFQLGLSPQIIASIIMQVLCHVLPSLVKLRKEGLDGHE 227
Query: 122 KIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 181
KIKSY+ +++ F I SI++ HVM+T+ LLVCGAMTM+W+CDT
Sbjct: 228 KIKSYMCMVAIVFLRYSGSISGGLHFS-SIFSFCSHCPHVMMTSSLLVCGAMTMTWLCDT 286
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
ISESGFG GSSLIICVGILTGYTETL+KML+Q+ GS W P++LGLLG+FT+VTM+AVV
Sbjct: 287 ISESGFGHGSSLIICVGILTGYTETLHKMLNQISGSFSNWLPYLLGLLGIFTVVTMFAVV 346
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
VTEGCRK+KLQYYGFKLASA+RE SPITEVEPYIPFNINP+GMQPVLTTTYLLAFPSILA
Sbjct: 347 VTEGCRKIKLQYYGFKLASASREGSPITEVEPYIPFNINPAGMQPVLTTTYLLAFPSILA 406
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGA 361
SILGSPF ++KEILNPE++VGA PWVYY+IYAFFVFLFNIFDIANLPKEIADYLNKMGA
Sbjct: 407 SILGSPFLLNMKEILNPESTVGAPPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGA 466
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
RIPN+KPGKATIEYLTKIQASTRFWGGLLLS LAT+ST+LDHYLR IN+GFSIGFTSVLI
Sbjct: 467 RIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATASTVLDHYLRSINQGFSIGFTSVLI 526
Query: 422 IVGSIIELRRSYQAYNVMPSLSKALRRYGV 451
IVGSIIELRRSY AYNVMPSLSKAL+RYGV
Sbjct: 527 IVGSIIELRRSYHAYNVMPSLSKALKRYGV 556
>gi|357133818|ref|XP_003568519.1| PREDICTED: preprotein translocase subunit secY-like [Brachypodium
distachyon]
Length = 531
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/451 (75%), Positives = 396/451 (87%), Gaps = 1/451 (0%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
Y+NRFL+ RL +V AE+FF+SEIRRRL VTAVLIV+SR+GYF+PLPGFDRRLIP
Sbjct: 81 YRNRFLDLARLGAVAEGVAETFFRSEIRRRLAVTAVLIVLSRVGYFVPLPGFDRRLIPDS 140
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
YLSF D+L DF +ELKLSFFQLGIS QI ASI+MQVLCH++PSL ++RKEGLDGHE
Sbjct: 141 YLSFAPLPADDLVDFSSELKLSFFQLGISHQISASIVMQVLCHVLPSLEKIRKEGLDGHE 200
Query: 122 KIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 181
KIK YIWW+SLGFAI+ A V+CYSL YSIYAAS+ VKHV++T+FLLV GAM+ +WICDT
Sbjct: 201 KIKGYIWWLSLGFAIVAACTVSCYSLQYSIYAASYRVKHVVLTSFLLVLGAMSTTWICDT 260
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
ISESGFG GSSLIICVGILTGYT+TL+KML+Q G+ + WP++LG+ G+F +VTM AV+
Sbjct: 261 ISESGFGHGSSLIICVGILTGYTDTLHKMLTQFSGNMYKCWPYILGVAGIFMMVTMGAVL 320
Query: 242 VTEGCRKVKLQYYGFKLASAAR-EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
VTEGCRK+KLQYYGFKLAS AR E+SP TEVEPYIPFNINP+GMQP+LTT+YLLAFPSI+
Sbjct: 321 VTEGCRKIKLQYYGFKLASGARNENSPATEVEPYIPFNINPTGMQPLLTTSYLLAFPSIM 380
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
ASI GSPFW ++KEILNP TSVG PWVYY YAF VF+FNIFDIANLPKEI+DYLNKM
Sbjct: 381 ASIFGSPFWGNLKEILNPRTSVGGSPWVYYLTYAFLVFVFNIFDIANLPKEISDYLNKMS 440
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
AR+P +KPG+AT++YLTKIQ STRFWGGLLLS+LATSS +LD YLR++NEGFSIGFTSVL
Sbjct: 441 ARVPKIKPGRATVDYLTKIQTSTRFWGGLLLSLLATSSLLLDRYLRQVNEGFSIGFTSVL 500
Query: 421 IIVGSIIELRRSYQAYNVMPSLSKALRRYGV 451
IIVGSIIELRRSYQAYNVMP+LSK L+RYG
Sbjct: 501 IIVGSIIELRRSYQAYNVMPALSKVLKRYGA 531
>gi|115463737|ref|NP_001055468.1| Os05g0397700 [Oryza sativa Japonica Group]
gi|113579019|dbj|BAF17382.1| Os05g0397700 [Oryza sativa Japonica Group]
gi|222631509|gb|EEE63641.1| hypothetical protein OsJ_18458 [Oryza sativa Japonica Group]
Length = 542
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/451 (75%), Positives = 394/451 (87%), Gaps = 1/451 (0%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
Y+NRFL+ RL +V +AAE+ F+SEIRRRL VTAVLI++SR+GYF+PLPGFDRRLIP
Sbjct: 92 YRNRFLDLARLGAVAESAAEALFRSEIRRRLAVTAVLILLSRVGYFVPLPGFDRRLIPDS 151
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
YLSF D+LGDF +ELKLSFFQLGIS QI ASI+MQVLCH++PSL +LRKEGLDGHE
Sbjct: 152 YLSFAPLPADDLGDFSSELKLSFFQLGISHQISASIVMQVLCHVLPSLEKLRKEGLDGHE 211
Query: 122 KIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 181
KIK YIWW+SLGFA++ A V+CYSL YSIYAAS+ VKHVM+T+ LV GAMTM+WICDT
Sbjct: 212 KIKGYIWWLSLGFALVAAFTVSCYSLQYSIYAASYRVKHVMITSLFLVLGAMTMTWICDT 271
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
ISESGFG GSSLIICVGILTGYT+TL+KML+Q G+ WP++LG+ G F +VTM AV+
Sbjct: 272 ISESGFGHGSSLIICVGILTGYTDTLHKMLTQFSGNWYSCWPYILGIAGTFILVTMGAVL 331
Query: 242 VTEGCRKVKLQYYGFKLASAAR-EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
VTEGCRK+KLQYYGFKLAS AR E SP+TEVEPYIPFNINP+GMQP+LTT+YLLAFPSI+
Sbjct: 332 VTEGCRKIKLQYYGFKLASGARSESSPVTEVEPYIPFNINPTGMQPLLTTSYLLAFPSIM 391
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
ASI G+ FW+ +KE LNP+TSVG PWVYY YAF VF+FNIFDIANLPKEI+DYLNKM
Sbjct: 392 ASIFGTQFWESLKETLNPKTSVGGGPWVYYLTYAFLVFVFNIFDIANLPKEISDYLNKMS 451
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
AR+P +KPG+AT+EYLTKIQ STRFWGG+LLS+LATSS +LD YLR+INEGFSIGFTSVL
Sbjct: 452 ARVPKIKPGRATVEYLTKIQTSTRFWGGILLSLLATSSLLLDRYLRQINEGFSIGFTSVL 511
Query: 421 IIVGSIIELRRSYQAYNVMPSLSKALRRYGV 451
IIVGSIIELRRSYQAYNVMP+LSK LRRYG
Sbjct: 512 IIVGSIIELRRSYQAYNVMPALSKVLRRYGA 542
>gi|326512654|dbj|BAJ99682.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/451 (75%), Positives = 398/451 (88%), Gaps = 1/451 (0%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
++NRFL+ RL +V AAE+FF+SEIRRRL VTAVLIV+SR+GYF+PLPGFDRRLIP
Sbjct: 81 FRNRFLDLARLGAVAEGAAEAFFRSEIRRRLAVTAVLIVLSRVGYFVPLPGFDRRLIPDS 140
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
YLSF D+L DF +ELKLSFFQLGIS QI ASI+MQVLCH++PSL ++RKEGLDGHE
Sbjct: 141 YLSFAPLPADDLVDFASELKLSFFQLGISHQISASIVMQVLCHVLPSLEKIRKEGLDGHE 200
Query: 122 KIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 181
KIKSYIWW+SLGFAI+ A V+CYSL YSIYAAS+ VKHV++T+FLLV GAM+ +WICDT
Sbjct: 201 KIKSYIWWLSLGFAIVAACTVSCYSLQYSIYAASYRVKHVILTSFLLVLGAMSTTWICDT 260
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
I+ESGFG GSSLIICVGILTGYT TL+KML+Q G+ WP++LG+ G+F +VTM AV+
Sbjct: 261 ITESGFGHGSSLIICVGILTGYTNTLHKMLTQFSGNVHTSWPYILGVAGIFMMVTMGAVL 320
Query: 242 VTEGCRKVKLQYYGFKLASAAR-EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
VTEGCRK+KLQYYGFKLAS+AR E+SP+TEVEPYIPFNINP+GMQP+LTT+YLLAFPSI+
Sbjct: 321 VTEGCRKIKLQYYGFKLASSARNENSPVTEVEPYIPFNINPTGMQPLLTTSYLLAFPSIM 380
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
ASI SPFW+++KEILNP TS G PWVYY YAFFVF+FNIFDIANLPKEI+DYLNKM
Sbjct: 381 ASIFRSPFWENLKEILNPMTSAGGSPWVYYLTYAFFVFVFNIFDIANLPKEISDYLNKMS 440
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
AR+P +KPG+AT++YLTKIQ STRFWGGLLLS+LATSS +LD YLR+INEGFSIGFTSVL
Sbjct: 441 ARVPKIKPGRATVDYLTKIQTSTRFWGGLLLSLLATSSLLLDRYLRQINEGFSIGFTSVL 500
Query: 421 IIVGSIIELRRSYQAYNVMPSLSKALRRYGV 451
IIVGSIIELRRSYQAYNVMP+LSK L+RYG
Sbjct: 501 IIVGSIIELRRSYQAYNVMPALSKVLKRYGA 531
>gi|125552246|gb|EAY97955.1| hypothetical protein OsI_19872 [Oryza sativa Indica Group]
Length = 518
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/468 (72%), Positives = 392/468 (83%), Gaps = 18/468 (3%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
Y+NRFL+ RL +V +AAE+ F+SEIRRRL +TAVLI++SR+GYF+PLPGFDRRLIP
Sbjct: 51 YRNRFLDLARLGAVAESAAEALFRSEIRRRLAITAVLILLSRVGYFVPLPGFDRRLIPYS 110
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVL-----------------CH 104
YLSF D+LGDF +ELKLSFFQLGIS QI ASI+MQVL CH
Sbjct: 111 YLSFAPLPADDLGDFSSELKLSFFQLGISHQISASIVMQVLFYPLFGPALLFSNGNVLCH 170
Query: 105 IVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVT 164
++PSL +LRKEGLDGHEKIK YIWW+SLGFA++ A V+CYSL YSIYAAS+ VKHVM+T
Sbjct: 171 VLPSLEKLRKEGLDGHEKIKGYIWWLSLGFALVAAFTVSCYSLQYSIYAASYRVKHVMIT 230
Query: 165 AFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF 224
+ LV GAMTM+WICDTISESGFG GSSLIICVGILTGYT+TL+KML+Q G+ W +
Sbjct: 231 SLFLVLGAMTMTWICDTISESGFGHGSSLIICVGILTGYTDTLHKMLTQFSGNWYSCWHY 290
Query: 225 MLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR-EDSPITEVEPYIPFNINPSG 283
+LG+ G F +VTM AV+VTEGCRK+KLQYYGFKLAS AR E SP+TEVEPYIPFNINP+G
Sbjct: 291 ILGIAGTFILVTMGAVLVTEGCRKIKLQYYGFKLASGARSESSPVTEVEPYIPFNINPTG 350
Query: 284 MQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 343
MQP+LTT+YLLAFPSI+ASI G+ FW+ +KE LNP+TSVG PW YY YAF VF+FNIF
Sbjct: 351 MQPLLTTSYLLAFPSIMASIFGTQFWESLKETLNPKTSVGGGPWAYYLTYAFLVFVFNIF 410
Query: 344 DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDH 403
DIANLPKEI+DYLNKM AR+P +KPG+AT+EYLTKIQ STRFWGG+LLS+LATSS +LD
Sbjct: 411 DIANLPKEISDYLNKMSARVPKIKPGRATVEYLTKIQTSTRFWGGILLSLLATSSLLLDR 470
Query: 404 YLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRYGV 451
YLR+INEGFSIGFTSVLIIVGSIIELRRSYQAYNVMP+LSK LRRYG
Sbjct: 471 YLRQINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPALSKVLRRYGA 518
>gi|239985657|ref|NP_001152011.1| preprotein translocase secY subunit [Zea mays]
gi|195651831|gb|ACG45383.1| preprotein translocase secY subunit [Zea mays]
gi|238006486|gb|ACR34278.1| unknown [Zea mays]
gi|413945260|gb|AFW77909.1| preprotein translocase secY subunit [Zea mays]
Length = 524
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/450 (73%), Positives = 392/450 (87%), Gaps = 1/450 (0%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
Y+NRFL+ RL +V AAE+FF+SEIRRRL VTA LIV+SR+GYFIPLPGFDRRLIP
Sbjct: 74 YRNRFLDLARLGAVAEGAAEAFFRSEIRRRLAVTAALIVLSRVGYFIPLPGFDRRLIPDS 133
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
YLSF + D+LGDF +ELKLSFFQLGIS QI ASI+MQVLCH++PSL +LRKEGLDGHE
Sbjct: 134 YLSFSALPADDLGDFSSELKLSFFQLGISHQISASIVMQVLCHVLPSLEKLRKEGLDGHE 193
Query: 122 KIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 181
K+K YIWW+SL FA + A V+C+SL YS+YAAS+ VKHV++T+ LLV GAM+M+WICDT
Sbjct: 194 KLKGYIWWLSLWFATVAAFTVSCFSLQYSVYAASYRVKHVIITSLLLVLGAMSMTWICDT 253
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
I+E GFG GSSLIICVGILTGYT+TL+KM++Q G+ WP++LG+ G+F I+TM AV+
Sbjct: 254 ITEFGFGHGSSLIICVGILTGYTDTLHKMITQFSGNFSYCWPYILGVAGIFMILTMGAVL 313
Query: 242 VTEGCRKVKLQYYGFKLAS-AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
VTEGCRK+KLQYYGFKLAS A E SP+TEVEPYIPFNINP+GMQP+LTT+YLLAFPSI+
Sbjct: 314 VTEGCRKIKLQYYGFKLASGAGNESSPVTEVEPYIPFNINPTGMQPLLTTSYLLAFPSIM 373
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
ASI SPFW++++EILNP+TS G PWVYY YAF VF+FNIFDIANLPKEI+DYLNKM
Sbjct: 374 ASIFASPFWENLREILNPKTSTGGSPWVYYLTYAFLVFIFNIFDIANLPKEISDYLNKMC 433
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
AR+P +KPG+AT++YLTKIQ STRFWGGLLLS+LATSS +LD YLR+INEG SIGFTSVL
Sbjct: 434 ARVPRIKPGRATVDYLTKIQTSTRFWGGLLLSLLATSSLLLDRYLRQINEGLSIGFTSVL 493
Query: 421 IIVGSIIELRRSYQAYNVMPSLSKALRRYG 450
IIVGSIIELRRSYQAYNVMP+LSK LRRYG
Sbjct: 494 IIVGSIIELRRSYQAYNVMPALSKVLRRYG 523
>gi|449489752|ref|XP_004158405.1| PREDICTED: preprotein translocase subunit SCY2, chloroplastic-like
[Cucumis sativus]
Length = 463
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 298/348 (85%), Positives = 331/348 (95%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
++NRFLN +RL SVLNNAAESFFKSEIRRRLFVTAVLIVISR+GYFIPLPGFDRRLIPQD
Sbjct: 45 FRNRFLNLLRLRSVLNNAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQD 104
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
YLSFVSGSVDELGDF E+K+SFFQLGISPQI+ASI+MQVLCHI+PSLV+LRKEGLDG E
Sbjct: 105 YLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRKEGLDGQE 164
Query: 122 KIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 181
KIKSYIWW+SLGFAILEA++++CYSLPYS+Y A+H VKHVMVT+FLLVCGAMT++WICDT
Sbjct: 165 KIKSYIWWMSLGFAILEALVLSCYSLPYSVYVANHRVKHVMVTSFLLVCGAMTITWICDT 224
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
ISESGFGQGSSLIICVGILTGYTETLYKMLSQL G +V WWP++L LLG+FT+VTMWAVV
Sbjct: 225 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGGAVVWWPYVLALLGIFTVVTMWAVV 284
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
VTEGCRK+KLQYYGFKLASAAREDSPITEVEPYIPFNINP+GMQP+LTTTYLLAFPSILA
Sbjct: 285 VTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPSILA 344
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLP 349
S+L S FW+HVKEILNPE+S+GA PWVYY IYA FVFLFNIFDI +LP
Sbjct: 345 SLLNSTFWEHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIESLP 392
>gi|242090451|ref|XP_002441058.1| hypothetical protein SORBIDRAFT_09g019570 [Sorghum bicolor]
gi|241946343|gb|EES19488.1| hypothetical protein SORBIDRAFT_09g019570 [Sorghum bicolor]
Length = 517
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 307/425 (72%), Positives = 369/425 (86%), Gaps = 1/425 (0%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
Y+NRFL+ RL +V +AE+FF+SEIRRRL VTA LIV+SR+GYFIPLPGFDRRLIP
Sbjct: 88 YRNRFLDLARLGAVAEGSAEAFFRSEIRRRLAVTAALIVLSRVGYFIPLPGFDRRLIPDS 147
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
YLSF D+LGDF +ELKLSFFQLGIS QI ASI+MQVLCH++PSL +LRKEGLDGHE
Sbjct: 148 YLSFSPLPADDLGDFSSELKLSFFQLGISHQISASIVMQVLCHVLPSLEKLRKEGLDGHE 207
Query: 122 KIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 181
K+K YIWW+SL FA + A V+CYSL YS+YAAS+ VKH+++T+ LLV GAM+M+WICDT
Sbjct: 208 KLKGYIWWLSLCFATVAAFTVSCYSLQYSVYAASYRVKHIIITSLLLVLGAMSMTWICDT 267
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
I+ESGFG GSSLIICVGILTGYT+TL+KM++Q G+ WP++LG+ G+F I+TM AV+
Sbjct: 268 ITESGFGHGSSLIICVGILTGYTDTLHKMITQFSGNFSYCWPYVLGVAGIFMILTMGAVL 327
Query: 242 VTEGCRKVKLQYYGFKLAS-AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
VTEGCRK+KLQYYGFKLAS A E +P+TEVEPYIPFNINP+GMQP+LTT+YLLAFPSI+
Sbjct: 328 VTEGCRKIKLQYYGFKLASGAGNESTPVTEVEPYIPFNINPTGMQPLLTTSYLLAFPSIM 387
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
ASI SPFW++++EILNP+TS G PWVYY+ YAF VF+FNIFDIANLPKEI+DYLNKM
Sbjct: 388 ASIFASPFWENLREILNPKTSTGGTPWVYYSTYAFLVFVFNIFDIANLPKEISDYLNKMS 447
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
AR+P +KPG+AT++YLTKIQ STRFWGGLLLS+LATSS +LD YLR+INEGFSIGFTSVL
Sbjct: 448 ARVPRIKPGRATVDYLTKIQTSTRFWGGLLLSLLATSSLLLDRYLRQINEGFSIGFTSVL 507
Query: 421 IIVGS 425
IIV +
Sbjct: 508 IIVST 512
>gi|46981327|gb|AAT07645.1| unknown protein [Oryza sativa Japonica Group]
gi|51854415|gb|AAU10794.1| unknown protein [Oryza sativa Japonica Group]
Length = 446
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 251/347 (72%), Positives = 296/347 (85%), Gaps = 1/347 (0%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
Y+NRFL+ RL +V +AAE+ F+SEIRRRL VTAVLI++SR+GYF+PLPGFDRRLIP
Sbjct: 92 YRNRFLDLARLGAVAESAAEALFRSEIRRRLAVTAVLILLSRVGYFVPLPGFDRRLIPDS 151
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
YLSF D+LGDF +ELKLSFFQLGIS QI ASI+MQVLCH++PSL +LRKEGLDGHE
Sbjct: 152 YLSFAPLPADDLGDFSSELKLSFFQLGISHQISASIVMQVLCHVLPSLEKLRKEGLDGHE 211
Query: 122 KIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 181
KIK YIWW+SLGFA++ A V+CYSL YSIYAAS+ VKHVM+T+ LV GAMTM+WICDT
Sbjct: 212 KIKGYIWWLSLGFALVAAFTVSCYSLQYSIYAASYRVKHVMITSLFLVLGAMTMTWICDT 271
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
ISESGFG GSSLIICVGILTGYT+TL+KML+Q G+ WP++LG+ G F +VTM AV+
Sbjct: 272 ISESGFGHGSSLIICVGILTGYTDTLHKMLTQFSGNWYSCWPYILGIAGTFILVTMGAVL 331
Query: 242 VTEGCRKVKLQYYGFKLASAAR-EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
VTEGCRK+KLQYYGFKLAS AR E SP+TEVEPYIPFNINP+GMQP+LTT+YLLAFPSI+
Sbjct: 332 VTEGCRKIKLQYYGFKLASGARSESSPVTEVEPYIPFNINPTGMQPLLTTSYLLAFPSIM 391
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIAN 347
ASI G+ FW+ +KE LNP+TSVG PWVYY YAF VF+FNIFDI +
Sbjct: 392 ASIFGTQFWESLKETLNPKTSVGGGPWVYYLTYAFLVFVFNIFDIVS 438
>gi|226503621|ref|NP_001140450.1| uncharacterized protein LOC100272509 [Zea mays]
gi|194699564|gb|ACF83866.1| unknown [Zea mays]
Length = 280
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/279 (76%), Positives = 249/279 (89%), Gaps = 1/279 (0%)
Query: 173 MTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVF 232
M+M+WICDTI+E GFG GSSLIICVGILTGYT+TL+KM++Q G+ WP++LG+ G+F
Sbjct: 1 MSMTWICDTITEFGFGHGSSLIICVGILTGYTDTLHKMITQFSGNFSYCWPYILGVAGIF 60
Query: 233 TIVTMWAVVVTEGCRKVKLQYYGFKLASAA-REDSPITEVEPYIPFNINPSGMQPVLTTT 291
I+TM AV+VTEGCRK+KLQYYGFKLAS A E SP+TEVEPYIPFNINP+GMQP+LTT+
Sbjct: 61 MILTMGAVLVTEGCRKIKLQYYGFKLASGAGNESSPVTEVEPYIPFNINPTGMQPLLTTS 120
Query: 292 YLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKE 351
YLLAFPSI+ASI SPFW++++EILNP+TS G PWVYY YAF VF+FNIFDIANLPKE
Sbjct: 121 YLLAFPSIMASIFASPFWENLREILNPKTSTGGSPWVYYLTYAFLVFIFNIFDIANLPKE 180
Query: 352 IADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEG 411
I+DYLNKM AR+P +KPG+AT++YLTKIQ STRFWGGLLLS+LATSS +LD YLR+INEG
Sbjct: 181 ISDYLNKMCARVPRIKPGRATVDYLTKIQTSTRFWGGLLLSLLATSSLLLDRYLRQINEG 240
Query: 412 FSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRYG 450
SIGFTSVLIIVGSIIELRRSYQAYNVMP+LSK LRRYG
Sbjct: 241 LSIGFTSVLIIVGSIIELRRSYQAYNVMPALSKVLRRYG 279
>gi|302804522|ref|XP_002984013.1| hypothetical protein SELMODRAFT_180624 [Selaginella moellendorffii]
gi|300148365|gb|EFJ15025.1| hypothetical protein SELMODRAFT_180624 [Selaginella moellendorffii]
Length = 571
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/456 (46%), Positives = 322/456 (70%), Gaps = 12/456 (2%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
Y N+F+ +++L SV+N+AA +FFKSE+RRR F+T +L+++ R G F+PLPGF+ R +P +
Sbjct: 122 YSNKFIRWVKLGSVINDAAMAFFKSEVRRRTFITIILLMVCRAGQFVPLPGFNHRTMPSN 181
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
+L + + E G F E K+SFF LG+SP I AS ++ VLC P ++RKEG +
Sbjct: 182 FLGSTALTASE-GAFLKEPKISFFHLGLSPYICASTVIHVLCSWYPPFQKMRKEG--EID 238
Query: 122 KIKSYIWWISLGFAILEAVIVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICD 180
KIKSY WW++L ++++A++++ +L Y+ + S KH + TA LL G+M + WI
Sbjct: 239 KIKSYTWWLTLSCSVIQALLLSYATLQYATAFFFSSRFKHFLFTASLLTSGSMLLEWISR 298
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKML---SQLLGSSVRWWPFMLGLLGVFTIVTM 237
I+ESGFGQGS+LIIC+GIL +++L M+ S+L S +W P +L +GVF +T
Sbjct: 299 RITESGFGQGSTLIICMGILVSSSQSLCNMVISFSRLDFS--KWGPALLLYVGVFLTMTA 356
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
AV+VTEG R +KLQ+YGF ++ D I EVEPYIPF+INP+GM PV ++YL+A P
Sbjct: 357 CAVLVTEGRRIIKLQFYGFDRFPSSGGDG-IPEVEPYIPFDINPNGMLPVYMSSYLMAVP 415
Query: 298 SILASILGSPFWQHVKEILNPE--TSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADY 355
S LA+IL +PF + ++ +LNP + GARPW+Y+T+ A + F++ D+++ K+I++Y
Sbjct: 416 SFLANILKTPFLRQLQVLLNPTLPPAPGARPWLYHTLTALLILTFSVLDVSDGAKDISEY 475
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
+N++GA+I +VKPG++T+E+L K+Q S R WGG LL++L T STI+D+ LR +++ I
Sbjct: 476 INRIGAKIADVKPGRSTVEFLRKVQTSARTWGGFLLALLVTVSTIIDYKLRSLHQTGGIS 535
Query: 416 FTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRYGV 451
FTS+L IVG+IIE+RRS+ AY+ M +LS LRRYGV
Sbjct: 536 FTSMLFIVGTIIEVRRSFMAYHAMHTLSNVLRRYGV 571
>gi|356570572|ref|XP_003553459.1| PREDICTED: preprotein translocase subunit secY-like [Glycine max]
Length = 338
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/217 (85%), Positives = 202/217 (93%), Gaps = 1/217 (0%)
Query: 1 MYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ 60
M++NRFLNF RL SV+N AAESFFKSEIRRRLFVTAVLIVISR+GYFIPLPGFDRRLIP+
Sbjct: 118 MFRNRFLNFARLGSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPE 177
Query: 61 DYLSFVSGS-VDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDG 119
DYLSFV+GS VDELGDF AELKLS FQLGISPQI+ I +QVLCH+VPSLV LRKEGLDG
Sbjct: 178 DYLSFVAGSSVDELGDFTAELKLSIFQLGISPQIINHIHVQVLCHVVPSLVNLRKEGLDG 237
Query: 120 HEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWIC 179
HEKIKSYIWW+S GFAILEA+IVACYSLPYSIYAA++ VKHVMVT+ LLVCGAMT++WIC
Sbjct: 238 HEKIKSYIWWMSFGFAILEALIVACYSLPYSIYAATYRVKHVMVTSVLLVCGAMTITWIC 297
Query: 180 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLG 216
DTISESGFGQGSSLIICVGILTGY ETLYKML+QL G
Sbjct: 298 DTISESGFGQGSSLIICVGILTGYMETLYKMLTQLSG 334
>gi|302753408|ref|XP_002960128.1| hypothetical protein SELMODRAFT_74191 [Selaginella moellendorffii]
gi|300171067|gb|EFJ37667.1| hypothetical protein SELMODRAFT_74191 [Selaginella moellendorffii]
Length = 565
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/456 (43%), Positives = 307/456 (67%), Gaps = 20/456 (4%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
Y N+F+ +++L SV+N+AA +FFKSE+RRR F+T +L+++ R G F+PLPGF+ R +P +
Sbjct: 124 YSNKFIRWVKLGSVINDAAMAFFKSEVRRRTFITIILLMVCRAGQFVPLPGFNHRTMPSN 183
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLC-HIVPSLVQLRKEGLDGH 120
+L + + E G F E K+SFF LG+SP I AS ++ V +VPS+ + K G
Sbjct: 184 FLGSTALTASE-GAFLKEPKISFFHLGLSPYICASTVIHVPSLFLVPSIPKDAK----GR 238
Query: 121 EKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICD 180
+ + ++S A L +++ C+ +++ ++ ++ A LL + + D
Sbjct: 239 RNRQDKVIYVSDRIA-LTVLLLTCF-----LHSWWLTLSCSVIQALLLSYATLQYATASD 292
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKML---SQLLGSSVRWWPFMLGLLGVFTIVTM 237
I+ESGFGQGS+LIIC+GIL +++L M+ S+L S +W P +L +GVF +T
Sbjct: 293 LITESGFGQGSTLIICMGILVSSSQSLCNMVISFSRLDFS--KWGPALLLYVGVFLTMTA 350
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
AV+VTEG R +KLQ+YGF ++ D I EVEPYIPF+INP+GM PV ++YL+A P
Sbjct: 351 CAVLVTEGRRIIKLQFYGFDRFPSSGGDG-IPEVEPYIPFDINPNGMLPVYMSSYLMAVP 409
Query: 298 SILASILGSPFWQHVKEILNPE--TSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADY 355
S LA+IL +PF + ++ +LNP + GARPW+Y+T+ A + F++ D+++ K+I++Y
Sbjct: 410 SFLANILKTPFLRRLQVLLNPTLPPAPGARPWLYHTLTALLILTFSVLDVSDGAKDISEY 469
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
+N++GA+I +VKPG++T+E+L K+Q S R WGG LL++L T STI+D+ LR +++ I
Sbjct: 470 INRIGAKIADVKPGRSTVEFLRKVQTSARTWGGFLLALLVTVSTIIDYKLRSLHQTGGIS 529
Query: 416 FTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRYGV 451
FTS+L IVG+IIE+RRS+ AY+ M +LS LRRYGV
Sbjct: 530 FTSMLFIVGTIIEVRRSFMAYHAMHTLSNVLRRYGV 565
>gi|17065028|gb|AAL32668.1| putative preprotein translocase SECY protein [Arabidopsis thaliana]
gi|20260012|gb|AAM13353.1| putative preprotein translocase SECY protein [Arabidopsis thaliana]
Length = 253
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 105/127 (82%), Positives = 123/127 (96%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
++NRFL+F+R+SSVLN AAE FFKSEIRRRLFVTAVL+V+SR+GYFIPLPGFDRRLIPQD
Sbjct: 126 FRNRFLDFVRISSVLNTAAERFFKSEIRRRLFVTAVLLVLSRVGYFIPLPGFDRRLIPQD 185
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
YLSFVSGSV+ELG+FGAE+KLS FQLG+SPQI+ASI+MQVLCH++PSLV+LRKEGLDGHE
Sbjct: 186 YLSFVSGSVEELGEFGAEIKLSLFQLGLSPQIIASIIMQVLCHVLPSLVKLRKEGLDGHE 245
Query: 122 KIKSYIW 128
KIKSY+
Sbjct: 246 KIKSYMC 252
>gi|303278562|ref|XP_003058574.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226459734|gb|EEH57029.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 340
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 202/355 (56%), Gaps = 20/355 (5%)
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+ FF +GI P I ASI MQV+ +VPSL +L K+ + G + +K Y +++ AI ++++
Sbjct: 1 IPFFHVGIGPYIGASIAMQVMVAVVPSLKELTKDPI-GQQTVKQYTRYLTFVVAIFQSIL 59
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
A PY + V AF +CGA+ ++W+ D ++ G G G+S++I + +
Sbjct: 60 TANELRPYYVGGPLSGYFWHAVPAF--ICGAIVVTWLADEMTNYGLGNGTSMLITMSVCG 117
Query: 202 GYTETLYKMLSQLLGSSV--RWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY-GFKL 258
Y + L+ GS ++ P++L + + T +V+V G KV L Y+ G +
Sbjct: 118 AYFKAASYYLTSYFGSIAIAQFMPWVLAAVAL----TAGSVLVQTGTCKVPLLYFQGPSI 173
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QHVKEILN 317
R +E++ +IPF +NP GMQPVL +L + LA ++ +P W Q L
Sbjct: 174 PGLPRVVR--SEID-HIPFKVNPLGMQPVLVAVFLCEGMTWLAGVMNTPGWYQAACAFLF 230
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
S W YY + VF F+ D+ + PKE+++Y+ K+GAR+PNV+PG+ TIEYL
Sbjct: 231 SHAS-----WFYYVTFFLIVFGFSYLDLQDTPKEVSEYMVKIGARVPNVRPGEKTIEYLG 285
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
++Q+ +RF+GG+LL +A + +D+ L R G S+GFTS+LI+ +I++++R
Sbjct: 286 ELQSGSRFFGGILLGAVAVACAFMDN-LMRARFGTSVGFTSMLIVTSTILQMKRQ 339
>gi|308807116|ref|XP_003080869.1| preprotein translocase SecY subunit (ISS) [Ostreococcus tauri]
gi|116059330|emb|CAL55037.1| preprotein translocase SecY subunit (ISS) [Ostreococcus tauri]
Length = 471
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 230/458 (50%), Gaps = 64/458 (13%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS---------GSVDELGDF 76
S I +RL ++V R G +P FD + + S + G++D + +
Sbjct: 40 SSIFKRLASVMAMMVFVRAGLLLPTRFFDATGVGESMFSMATLMSTFSGGNGALDVVANA 99
Query: 77 ---------GAELKLSF-------------FQLGISPQIVASILMQVLCHIVPSLVQLRK 114
G L+ S+ F +GI P I ASI + + + P Q+RK
Sbjct: 100 LGLSGTAAGGDALRSSWLAESLSSGGGVPWFHVGIGPYIGASIAVSIFTAMTPEFQQMRK 159
Query: 115 EGLDGHEKIKSYIWW---ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCG 171
+ G E IK WW ++ A++++V+ A +S+ ++V F V G
Sbjct: 160 D-QTGQETIK---WWTRLLTFAIALVQSVVEARSMRMHSLVGTGFEYYLLVVPMF--VTG 213
Query: 172 AMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGV 231
A+ ++WI D I+ G GQGSS+II + I GY L +L +++ + L ++
Sbjct: 214 ALAITWIADEITNYGLGQGSSVIITMSICGGYFTALKALLPKIIENFT--LAAALPIVAF 271
Query: 232 FTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVE--PYIPFNINPSGMQPVLT 289
F++ + V++ +G KV LQY+ SA + I E + +IPF INP+ MQPV+
Sbjct: 272 FSVFMLGTVILEQGTAKVPLQYFQGPAGSAGLPKA-IAEADEGDHIPFKINPTNMQPVIF 330
Query: 290 TTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLP 349
+ ILG+ W + + A VY+ + FVF D+ N P
Sbjct: 331 AMF----------ILGALQWLPI--------GLKANSVVYFVLLFVFVFTGTYIDLQNTP 372
Query: 350 KEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN 409
+EI++YL K+GAR+P V+PG T+++ ++QA +RF+GG+LL+ +AT+ ++ D ++ ++
Sbjct: 373 QEISEYLMKIGARVPGVRPGTQTVDFFNRVQAGSRFFGGVLLASIATACSLTDMWMNKMI 432
Query: 410 EGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALR 447
G S G TS+LI+V +I+ ++R A + MP + +ALR
Sbjct: 433 -GQSFGLTSMLIVVSTIVSIKRQIAAMSQMPKMDQALR 469
>gi|145349980|ref|XP_001419403.1| IISP family transporter: preprotein translocase SecY subunit
[Ostreococcus lucimarinus CCE9901]
gi|144579634|gb|ABO97696.1| IISP family transporter: preprotein translocase SecY subunit
[Ostreococcus lucimarinus CCE9901]
Length = 421
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 213/393 (54%), Gaps = 31/393 (7%)
Query: 61 DYLSFVSGSVDELGD-FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDG 119
D + V+ + L D A + +F +GI P I ASI M V+ P L ++RK+ + G
Sbjct: 52 DKTAAVTQGANWLADSMSAGGGVPWFHIGIGPFIGASIAMSVVVAFSPDLQRMRKDEM-G 110
Query: 120 HEKIKSYIWW---ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMS 176
E I+ WW ++L A++++VI A YS+ +V F + GA+ ++
Sbjct: 111 RETIE---WWTRLMTLAIAVIQSVIEARTLKVYSLVGTGLGYYLAVVPMF--ITGALAIT 165
Query: 177 WICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTI 234
W+ D I++ G GQGSS+II + I GY L +L +++ + F L F +
Sbjct: 166 WVADEITDYGLGQGSSVIITMSICGGYFAALKALLPKIMTD----FSFATALPAFAFFGV 221
Query: 235 VTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLL 294
+ + V++ +G KV LQY+ SA + + +IPF INP+ MQPV+ + +LL
Sbjct: 222 LMLGTVLLEQGTAKVPLQYFQGPSGSAGLPKAFKEDEGDHIPFKINPTNMQPVIFSMFLL 281
Query: 295 AFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIAD 354
+ L PF +N + SVG Y+ + VF D+ N P++I++
Sbjct: 282 SALQWL------PF--GFLSWINGQ-SVG-----YFVLLFILVFAGTYVDLQNTPQDISE 327
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 414
Y+ K+GAR+P ++PG T+E+ +++QA RF+GG+LL+ +AT ++ D ++ + G SI
Sbjct: 328 YIMKIGARVPGIRPGTKTVEFFSRVQAGARFFGGILLATIATICSLTDLWMSK-TTGQSI 386
Query: 415 GFTSVLIIVGSIIELRRSYQAYNVMPSLSKALR 447
G TS+LI+V ++I ++R QA + MP + + L+
Sbjct: 387 GLTSMLIVVSTVIAVKRQIQAMSQMPKMDEVLQ 419
>gi|413945259|gb|AFW77908.1| hypothetical protein ZEAMMB73_730962 [Zea mays]
Length = 201
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 91/126 (72%), Positives = 107/126 (84%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
Y+NRFL+ RL +V AAE+FF+SEIRRRL VTA LIV+SR+GYFIPLPGFDRRLIP
Sbjct: 74 YRNRFLDLARLGAVAEGAAEAFFRSEIRRRLAVTAALIVLSRVGYFIPLPGFDRRLIPDS 133
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
YLSF + D+LGDF +ELKLSFFQLGIS QI ASI+MQVLCH++PSL +LRKEGLDGHE
Sbjct: 134 YLSFSALPADDLGDFSSELKLSFFQLGISHQISASIVMQVLCHVLPSLEKLRKEGLDGHE 193
Query: 122 KIKSYI 127
K+K Y+
Sbjct: 194 KLKGYM 199
>gi|255081470|ref|XP_002507957.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226523233|gb|ACO69215.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 363
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 201/370 (54%), Gaps = 22/370 (5%)
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+ FF +GI P I ASI MQV+ +VPS+ +L K+ + G ++ Y ++ AI+++ +
Sbjct: 8 IPFFHVGIGPIIAASIAMQVIVALVPSMKELTKDAV-GQHTVQQYTRYLMFVVAIIQSFL 66
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
A + + S + + + V G+ ++WI D +++ G G GSS++I + +
Sbjct: 67 TASELRQFYVEGLS-PLGYYWTIVPVFVLGSCVLAWISDEMTDFGLGNGSSVLITMSVCG 125
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK---- 257
Y LL +S+ +L +G + +V+V G KV L Y+
Sbjct: 126 AYWNAAKYYAPALLTASLEQ---ILPFVGAGLALIAGSVLVQTGTCKVPLLYFQGPSIPG 182
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP-FWQHVKEIL 316
L R+D +IPF +NP G+QPVL ++ L IL P F + E L
Sbjct: 183 LPRVVRKDVD------HIPFKVNPLGVQPVLVAVFMCDGFMWLNKILDPPGFIRAATEFL 236
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
S +YY + VF F+ D+ + PK++++Y+ K+GARIP+V+PG+AT+ YL
Sbjct: 237 FSNASP-----MYYVTFFLIVFGFSYLDLQDTPKDVSEYMVKIGARIPDVRPGEATVRYL 291
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+++Q+ +RF+GGLLL I+A + T++D +++ G S+GFTS+LI+V +I++++R A
Sbjct: 292 SELQSGSRFFGGLLLGIVAVACTMMDQWMKA-TVGISVGFTSMLIVVSTILQIQRQVTAL 350
Query: 437 NVMPSLSKAL 446
MP L + +
Sbjct: 351 AQMPKLDRVI 360
>gi|56751892|ref|YP_172593.1| preprotein translocase subunit SecY [Synechococcus elongatus PCC
6301]
gi|81301023|ref|YP_401231.1| preprotein translocase subunit SecY [Synechococcus elongatus PCC
7942]
gi|61242549|sp|P0A4H0.1|SECY_SYNE7 RecName: Full=Protein translocase subunit SecY
gi|61242553|sp|P0A4H1.1|SECY_SYNP6 RecName: Full=Protein translocase subunit SecY
gi|282208|pir||S27155 preprotein translocase secY - Synechococcus sp
gi|47618|emb|CAA48194.1| SecY protein [Synechococcus elongatus PCC 7942]
gi|2446908|dbj|BAA22467.1| preprotein translocase SecY subunit [Synechococcus elongatus PCC
6301]
gi|56686851|dbj|BAD80073.1| preprotein translocase SecY subunit [Synechococcus elongatus PCC
6301]
gi|81169904|gb|ABB58244.1| protein translocase subunit secY/sec61 alpha [Synechococcus
elongatus PCC 7942]
Length = 439
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 218/435 (50%), Gaps = 33/435 (7%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-----LSFVSG 68
NA E+F + S +R R+ +T L+++ R+G FIP+PG DR D L V G
Sbjct: 10 NAQETFLQMAQASGLRGRILITVGLLILCRLGIFIPVPGIDRVAFSNDLQGNANLGGVIG 69
Query: 69 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 127
+D G L F LGI P I ASI++Q+L VP+L L+K EG G KI
Sbjct: 70 FLDIFSGGGLS-ALGVFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRKIAQLT 128
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
++SLG+A+L+++++A + + YA + + TA LV G+M + WI + I+E G
Sbjct: 129 RYVSLGWALLQSIVIAVW---VTRYAVTPGPLFTIQTALALVAGSMFVMWISELITERGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G G+SL+I + I+ +L + L ++ LL VF + V V EG R
Sbjct: 186 GNGASLLIFLNIVATLPRSLQQTLELAQSGDRSTVGGIVILLIVFLATIVGIVFVQEGTR 245
Query: 248 KVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
++ + SA R+ + +E Y+P +N G+ P++ + +L P LA+
Sbjct: 246 RI-------PVVSARRQVGNRVYSERSSYLPLRLNQGGVMPIIFASAILVLPFSLANFTS 298
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGAR 362
+ + L+P G PW+Y Y + F+ F I N P ++A L KMG+
Sbjct: 299 NEVVLRIANYLSPN---GPTPWIYALFYLVLIVAFSYFYSSLILN-PVDLAQNLKKMGSS 354
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLI 421
IP V+PG+AT +Y+ + G + L ++A T ++ R R +GF G TS+LI
Sbjct: 355 IPGVRPGRATSQYVQGVLNRLTILGAVFLGLVAIIPTAVEGATRIRTFQGF--GATSLLI 412
Query: 422 IVGSIIELRRSYQAY 436
+VG I+ + Q Y
Sbjct: 413 LVGVAIDTAKQVQTY 427
>gi|164686547|ref|ZP_02210575.1| hypothetical protein CLOBAR_00114 [Clostridium bartlettii DSM
16795]
gi|164604416|gb|EDQ97881.1| preprotein translocase, SecY subunit [Clostridium bartlettii DSM
16795]
Length = 422
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 230/444 (51%), Gaps = 33/444 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG----SV 70
+L+ +S+ ++RRR+ T ++I+I RIG IP+PG D +I + VSG ++
Sbjct: 1 MLSKIKQSWKVKDVRRRILYTLMMILIFRIGTTIPVPGVDTSIISK----LVSGNSLLAL 56
Query: 71 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ GA + F LGI P I ASI++Q+L SL +L+K G +G +K+ Y +
Sbjct: 57 YNMFTGGAFSNFTLFALGIGPYITASIIIQLLTVGFESLKELQKSGEEGRKKMNMYTRYT 116
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
+L AI++AV + + ++ S ++ + L+ +M + W+ D I+E G G G
Sbjct: 117 ALVLAIIQAVGITLGVVKGAL--KSDNIFFITTVIITLIAASMILMWMGDRITEKGLGNG 174
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKV 249
SS+II VGI++ + +++ + +++ W ++ +L + ++T+ V + E RK+
Sbjct: 175 SSIIIFVGIISRIPTDIISVVNSVQSGTIKLW--LVIILAIIMLITITLVTFINEAVRKI 232
Query: 250 KLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
+QY G KL +IP +N SG+ P++ + LLAFP +A +G
Sbjct: 233 PVQYAKKVVGRKLYGGQNS---------HIPMKVNQSGVMPIIFASSLLAFPQTIALFMG 283
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARI 363
V L+ +G W+Y ++ + F+ F I+ +IA+ + G I
Sbjct: 284 ENAQNFVSTYLSTSGDIGF--WIYRSLEVLLIVFFSYFYTTISFNVDDIAENMKNNGGFI 341
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PG+ TI+YL++I + G L L+++A H++ + S+ TS+LI+V
Sbjct: 342 PGIRPGRPTIDYLSRILSRITLAGALFLAVIAMIPAFTVHFM---SVNMSLAGTSILIVV 398
Query: 424 GSIIELRRSYQAYNVMPSLSKALR 447
G +EL+R +++ VM S L+
Sbjct: 399 GVALELKRQLESHLVMRSYQGFLK 422
>gi|434391761|ref|YP_007126708.1| protein translocase subunit secY/sec61 alpha [Gloeocapsa sp. PCC
7428]
gi|428263602|gb|AFZ29548.1| protein translocase subunit secY/sec61 alpha [Gloeocapsa sp. PCC
7428]
Length = 437
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 220/432 (50%), Gaps = 28/432 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +RRRL VT +++++R+G F+P+PG +R L Q S + L
Sbjct: 9 TAQETFMQMAQAAGLRRRLLVTVGILILARLGVFLPVPGINRALFAQASQSGNNALFGFL 68
Query: 74 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 130
F G L F LGI P I ASI++Q+L +P+L L+K EG G KI ++
Sbjct: 69 DIFSGGGLSTLGVFALGILPYINASIIIQLLTAAIPALENLQKNEGEAGRRKISQITRYV 128
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
SLG+AIL+++ +A + L YA + V TA L G+M + W + I+E G G G
Sbjct: 129 SLGWAILQSIFIAAFWL--QPYAFNPGPIFVAQTAIALTAGSMFIMWASELITERGVGNG 186
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
+SL+I V I+ L ++ S ++ LL VF ++ + V V EG R++
Sbjct: 187 ASLLIFVNIVASLPRALGDTIAFAQTGSREAVGGVVVLLLVFLVMIVGIVFVQEGTRRIP 246
Query: 251 LQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ SA R+ E Y+P +N G+ P++ + +L P+ LAS + F
Sbjct: 247 I-------ISARRQVGRRFFQEQRSYLPLRLNQGGVMPIIFASAVLILPASLASFTRNEF 299
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIADYLNKMGARIPN 365
+ L+P G PWVY Y + F+ F I N P ++A L KMGA IP
Sbjct: 300 LLRIANYLSPN---GPTPWVYALAYLVLILFFSYFYATLIVN-PVDLAQNLKKMGATIPG 355
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVG 424
++PG+AT EY+ ++ F G + L ++A T ++ + R +G +G TS+LI+VG
Sbjct: 356 IRPGRATSEYVERVLNRLTFLGAIFLGLVAIVPTAVESATQVRTFQG--LGATSLLILVG 413
Query: 425 SIIELRRSYQAY 436
I+ + Q Y
Sbjct: 414 VAIDTAKQIQTY 425
>gi|126697660|ref|YP_001086557.1| preprotein translocase subunit SecY [Clostridium difficile 630]
gi|254973751|ref|ZP_05270223.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-66c26]
gi|255091141|ref|ZP_05320619.1| preprotein translocase SecY subunit [Clostridium difficile CIP
107932]
gi|255099252|ref|ZP_05328229.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-63q42]
gi|255305035|ref|ZP_05349207.1| preprotein translocase SecY subunit [Clostridium difficile ATCC
43255]
gi|255312795|ref|ZP_05354378.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-76w55]
gi|255515554|ref|ZP_05383230.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-97b34]
gi|255648649|ref|ZP_05395551.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-37x79]
gi|260681866|ref|YP_003213151.1| preprotein translocase SecY subunit [Clostridium difficile CD196]
gi|260685464|ref|YP_003216597.1| preprotein translocase SecY subunit [Clostridium difficile R20291]
gi|306518771|ref|ZP_07405118.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-32g58]
gi|384359419|ref|YP_006197271.1| preprotein translocase SecY subunit [Clostridium difficile BI1]
gi|423081676|ref|ZP_17070278.1| preprotein translocase, SecY subunit [Clostridium difficile
002-P50-2011]
gi|423085170|ref|ZP_17073625.1| preprotein translocase, SecY subunit [Clostridium difficile
050-P50-2011]
gi|423089485|ref|ZP_17077843.1| preprotein translocase, SecY subunit [Clostridium difficile
70-100-2010]
gi|115249097|emb|CAJ66908.1| Preprotein translocase SecY subunit [Clostridium difficile 630]
gi|260208029|emb|CBA60223.1| preprotein translocase SecY subunit [Clostridium difficile CD196]
gi|260211480|emb|CBE01614.1| preprotein translocase SecY subunit [Clostridium difficile R20291]
gi|357550254|gb|EHJ32079.1| preprotein translocase, SecY subunit [Clostridium difficile
002-P50-2011]
gi|357550502|gb|EHJ32316.1| preprotein translocase, SecY subunit [Clostridium difficile
050-P50-2011]
gi|357558095|gb|EHJ39602.1| preprotein translocase, SecY subunit [Clostridium difficile
70-100-2010]
Length = 422
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/431 (30%), Positives = 221/431 (51%), Gaps = 33/431 (7%)
Query: 28 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG----SVDELGDFGAELKLS 83
+R+++ T ++IVI RIG IP+PG D +I + V G S+ + GA S
Sbjct: 14 VRKKVMYTLMMIVIFRIGTTIPVPGIDTSIIQK----MVGGNSLLSLYNMFTGGAFSNFS 69
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGISP I ASI++Q+L SL +L+K G +G +KI Y + +L A+++A+ +
Sbjct: 70 LFALGISPYITASIIIQLLTVGFESLAELQKSGEEGKKKINKYTKYTALALAVVQALGIT 129
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
+ ++ S+SV + LV +M + WI D I+E G G GSS+II GI++
Sbjct: 130 LGIVRSALI--SNSVFFITTVVITLVSASMLVMWIGDKITEKGIGNGSSVIIFAGIISRI 187
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQY----YGFKL 258
+ K+ Q+ V W ++ +L V ++T+ V + E RK+ +QY G K+
Sbjct: 188 PTDVIKISQQVKSGEVAPW--VIVILAVVILLTVTGVTFIQEATRKIPVQYAKRVVGRKM 245
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
+IP +N SG+ P++ + LLAFP +A +G V++ L+
Sbjct: 246 YGGQSS---------HIPMKVNQSGVMPIIFASSLLAFPQTIAMFMGPNAQAFVQKYLSM 296
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
T G W Y +I + F+ F ++ ++I+ + G IP ++PG+ T++YL
Sbjct: 297 ATEQGF--WTYRSIEILLIIFFSYFYTTVSFNTEDISKNMKNNGGFIPGIRPGEPTMDYL 354
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+I G L+I+A + HY+ ++N S+ TS+LI+VG +EL+R ++
Sbjct: 355 NRILTRLTLAGATFLAIIAMVPALTTHYM-KVN--MSLAGTSLLIVVGVALELKRQLESN 411
Query: 437 NVMPSLSKALR 447
VM S L+
Sbjct: 412 LVMRSYQGFLK 422
>gi|255654182|ref|ZP_05399591.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-23m63]
gi|296449779|ref|ZP_06891548.1| preprotein translocase subunit SecY [Clostridium difficile NAP08]
gi|296877843|ref|ZP_06901865.1| preprotein translocase subunit SecY [Clostridium difficile NAP07]
gi|296261377|gb|EFH08203.1| preprotein translocase subunit SecY [Clostridium difficile NAP08]
gi|296431143|gb|EFH16968.1| preprotein translocase subunit SecY [Clostridium difficile NAP07]
Length = 422
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/431 (30%), Positives = 221/431 (51%), Gaps = 33/431 (7%)
Query: 28 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG----SVDELGDFGAELKLS 83
+R+++ T ++IVI RIG IP+PG D +I + V G S+ + GA S
Sbjct: 14 VRKKVMYTLMMIVIFRIGTTIPVPGIDTSIIQK----MVGGNSLLSLYNMFTGGAFSNFS 69
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGISP I ASI++Q+L SL +L+K G +G +KI Y + +L A+++A+ +
Sbjct: 70 LFALGISPYITASIIIQLLTVGFESLAELQKSGEEGKKKINKYTKYTALALAVVQALGIT 129
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
+ ++ S+SV + LV +M + WI D I+E G G GSS+II GI++
Sbjct: 130 LGIVRSALI--SNSVFFITTVVITLVSASMLVMWIGDKITEKGIGNGSSVIIFAGIISRI 187
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQY----YGFKL 258
+ K+ Q+ V W ++ +L V ++T+ V + E RK+ +QY G K+
Sbjct: 188 PTDVIKISQQVKSGQVAPW--VIVILAVVILLTVTGVTFIQEATRKIPVQYAKRVVGRKM 245
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
+IP +N SG+ P++ + LLAFP +A +G V++ L+
Sbjct: 246 YGGQSS---------HIPMKVNQSGVMPIIFASSLLAFPQTIAMFMGPNAQAFVQKYLSM 296
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
T G W Y +I + F+ F ++ ++I+ + G IP ++PG+ T++YL
Sbjct: 297 ATEQGF--WTYRSIEILLIIFFSYFYTTVSFNTEDISKNMKNNGGFIPGIRPGEPTMDYL 354
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+I G L+I+A + HY+ ++N S+ TS+LI+VG +EL+R ++
Sbjct: 355 NRILTRLTLAGATFLAIIAMVPALTTHYM-KVN--MSLAGTSLLIVVGVALELKRQLESN 411
Query: 437 NVMPSLSKALR 447
VM S L+
Sbjct: 412 LVMRSYQGFLK 422
>gi|412993920|emb|CCO14431.1| preprotein translocase subunit SecY [Bathycoccus prasinos]
Length = 671
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 226/477 (47%), Gaps = 72/477 (15%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFI------------------PLPGFDRRLIPQD---Y 62
F S+I RR+ ++ + R GY P+ ++L+ +
Sbjct: 214 FTSDITRRIVACTGMLTVLRAGYIGQSRLFDASKVGSVTQSSGPMADMAKKLMEDPSFAH 273
Query: 63 LSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEK 122
+ V G ++ + G ++ F LGI P + SI+MQVL I P + +++K+ + G EK
Sbjct: 274 MGDVLGGARQITEHGG---VTIFHLGIGPFVAGSIIMQVLMAIDPQMKEMKKDRM-GMEK 329
Query: 123 IKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTI 182
+K +++L A++ I A + L Y A + M L GAMT++W+ I
Sbjct: 330 LKQQGRYLTLIIALILGAIEA-HKLKYLCAMAIPGFLYYMTATMLFAAGAMTITWVAQEI 388
Query: 183 SESGFGQGSSLIICVGILTGYTETLYKML---------------------SQLLGSSVRW 221
++ G G+GS +II + I Y T+ + S L SVR
Sbjct: 389 TDYGIGEGSGMIITMSICASYASTVKNAIFVEKVTSSGGTAAAAAAAFVSSGSLLESVRG 448
Query: 222 W---PFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFN 278
P L + G ++T + ++ EG K+ LQ++ AS + + E IP
Sbjct: 449 LVVNPAFLTISGFVVLLTFASALLNEGTCKIPLQFFQGPDASQLPKSAQSESSE--IPIR 506
Query: 279 INPSGMQPVLTTTYLLAF-PSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFV 337
+NP GM ++ + L F +A + + + + I +P T ++++V
Sbjct: 507 VNPGGMTMIIAFSMLCGFFREQVAPAMPAAIGKTLVSICDP------------TNFSYYV 554
Query: 338 FLF------NIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLL 391
FLF + D+ N PKE+A+Y+ K+GARIPNV+PG T +YL +Q +F+GG+LL
Sbjct: 555 FLFVFCIAGSYIDVQNTPKEVAEYITKIGARIPNVRPGVQTEKYLRDLQNGAKFFGGVLL 614
Query: 392 SILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
++A +I D Y+R G ++GFTS+LI +++ L+R +A +PS+ L+
Sbjct: 615 GLIACVCSIADEYVRG-TYGVNVGFTSMLICTSTMLSLKRQIRALGEVPSMKVVLKE 670
>gi|409991903|ref|ZP_11275127.1| preprotein translocase subunit SecY [Arthrospira platensis str.
Paraca]
gi|291567802|dbj|BAI90074.1| preprotein translocase SecY subunit [Arthrospira platensis NIES-39]
gi|409937233|gb|EKN78673.1| preprotein translocase subunit SecY [Arthrospira platensis str.
Paraca]
Length = 438
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 222/447 (49%), Gaps = 58/447 (12%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD--------YLSF 65
A E+F + + +R R+ VT L+++ R+G F+P+PG DR+ Q+ +L
Sbjct: 10 TAQETFMQMAQAAGLRGRILVTIGLLILVRLGVFLPIPGIDRQAFSQNIQNTPFIGFLDL 69
Query: 66 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 124
SG G F A L F LGI P I ASI+MQ++ +P+L L+K EG G KI
Sbjct: 70 FSG-----GGFSA---LGIFALGILPYINASIIMQLMTAALPTLEDLQKNEGEAGRRKIS 121
Query: 125 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+++LG+AIL+++ +A + P++ + L G+M + W+ + I+E
Sbjct: 122 QITRYVALGWAILQSIGIAIWVSPFAQNPNQPQFIVMAEVVLALAAGSMFVMWVSELITE 181
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW----PFMLG----LLGVFTIVT 236
G G G+SL+I + I+ +L Q LGS++ ++G LL +F +
Sbjct: 182 RGIGNGASLLIFINIVA--------VLPQSLGSTIELAQSGDSAIVGRVVILLLIFLAMI 233
Query: 237 MWAVVVTEGCRKVKL----QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTY 292
+ V V EG R++ + + G KL RE S Y+P +N G+ P++ +
Sbjct: 234 VGIVFVQEGTRRIPIVSARRQVGRKLY---REKSS------YLPLRLNQGGVMPIIFASA 284
Query: 293 LLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPK 350
+L P+ ++ +P + L+P G PWVY Y + F+ F + P
Sbjct: 285 VLILPASISQFANNPILVQISTYLSPG---GPAPWVYIAFYLLMILFFSYFYASLIMNPV 341
Query: 351 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN- 409
++A L KMGA IP ++PG+AT EY+ ++ F G + L ++A T+++ R
Sbjct: 342 DMAQNLKKMGASIPGIRPGRATSEYIERVLNRLTFLGAVFLGLVAIIPTVVESATRVPTF 401
Query: 410 EGFSIGFTSVLIIVGSIIELRRSYQAY 436
GF G TS+LI+VG I+ + Q Y
Sbjct: 402 RGF--GATSLLILVGVAIDTAKQVQTY 426
>gi|15605676|ref|NP_213051.1| preprotein translocase subunit SecY [Aquifex aeolicus VF5]
gi|6226133|sp|O66491.1|SECY_AQUAE RecName: Full=Protein translocase subunit SecY
gi|215794644|pdb|3DL8|G Chain G, Structure Of The Complex Of Aquifex Aeolicus Secyeg And
Bacillus Subtilis Seca
gi|215794645|pdb|3DL8|H Chain H, Structure Of The Complex Of Aquifex Aeolicus Secyeg And
Bacillus Subtilis Seca
gi|2982812|gb|AAC06435.1| preprotein translocase SecY [Aquifex aeolicus VF5]
Length = 429
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 226/439 (51%), Gaps = 37/439 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL-KL 82
E+R++ T ++ VI R+G IP+PG + + +D+L GSV L D G L +L
Sbjct: 12 KELRQKFIFTLLMFVIYRLGSHIPIPGINPEAL-RDFLKAFEGSVFALYDIFSGGNLGRL 70
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEAVI 141
+ F LG+ P I ASI+MQ+L +PSL +L KE D G KI Y +++L A ++++
Sbjct: 71 TVFALGVMPYISASIMMQLLTVAIPSLQRLAKEEGDYGRYKINEYTKYLTLFVATVQSLG 130
Query: 142 VACY----SLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
+A + P I + + +++T LV G M + WI D I+E G G G+SLII
Sbjct: 131 IAFWIRGQVSPKGIPVVENPGISFILITVLTLVAGTMFLVWIADRITEKGIGNGASLIIF 190
Query: 197 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYG 255
GI+ + + + ++ + P L L+ I + +V V E R++ +QY G
Sbjct: 191 AGIVANFPNAVIQFYEKVKTGDI--GPLTLLLIIALIIAIIVGIVYVQEAERRIPIQYPG 248
Query: 256 FKLAS---AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
++ A R+ Y+P INP+G+ P++ LL PS L + + +PF + +
Sbjct: 249 RQVGRQLYAGRKT--------YLPIKINPAGVIPIIFAQALLLIPSTLLNFVQNPFIKVI 300
Query: 313 KEILNPETSVGARPWVYYT-IYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 369
++ P GA ++Y +Y F+ F F A L P E+A+ L+K GA IP V+PG
Sbjct: 301 ADMFQP----GA---IFYNFLYVTFIVFFTYFYTAVLINPVELAENLHKAGAFIPGVRPG 353
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
+ T++YL +I F+G L LS++A ++ + N F G T+ LI+VG ++
Sbjct: 354 QDTVKYLERIINRLIFFGALFLSVIALIPILISVWF---NIPFYFGGTTALIVVGVALDT 410
Query: 430 RRSYQAYNVMPSLSKALRR 448
R + Y + +RR
Sbjct: 411 FRQIETYLIQKKYKSYVRR 429
>gi|376007809|ref|ZP_09784994.1| preprotein translocase membrane subunit [Arthrospira sp. PCC 8005]
gi|423062916|ref|ZP_17051706.1| preprotein translocase SecY subunit [Arthrospira platensis C1]
gi|375323785|emb|CCE20747.1| preprotein translocase membrane subunit [Arthrospira sp. PCC 8005]
gi|406715495|gb|EKD10649.1| preprotein translocase SecY subunit [Arthrospira platensis C1]
Length = 438
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 222/447 (49%), Gaps = 58/447 (12%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD--------YLSF 65
A E+F + + +R R+ VT L+++ R+G F+P+PG DR+ Q+ +L
Sbjct: 10 TAQETFMQMAQAAGLRGRILVTIGLLILVRLGVFLPIPGIDRQAFSQNIQNTPFIGFLDL 69
Query: 66 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 124
SG G F A L F LGI P I ASI+MQ++ +P+L L+K EG G KI
Sbjct: 70 FSG-----GGFSA---LGIFALGILPYINASIIMQLMTAALPTLEDLQKNEGEAGRRKIS 121
Query: 125 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+++LG+AIL+++ +A + P++ + L G+M + W+ + I+E
Sbjct: 122 QITRYVALGWAILQSIGIAIWVSPFAQNPNQPQFIVMAEVVLALAAGSMFVMWVSELITE 181
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW----PFMLG----LLGVFTIVT 236
G G G+SL+I + I+ +L Q LGS++ ++G LL +F +
Sbjct: 182 RGIGNGASLLIFINIVA--------VLPQSLGSTIELAQSGDSAIVGRVVILLLIFLAMI 233
Query: 237 MWAVVVTEGCRKVKL----QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTY 292
+ V V EG R++ + + G KL RE S Y+P +N G+ P++ +
Sbjct: 234 VGIVFVQEGTRRIPIVSARRQVGRKLY---REKSS------YLPLRLNQGGVMPIIFASA 284
Query: 293 LLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPK 350
+L P+ ++ +P + L+P G PW+Y Y + F+ F + P
Sbjct: 285 VLILPASISQFANNPVLVQISTYLSPG---GPAPWLYIAFYLLMILFFSYFYASLIMNPV 341
Query: 351 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN- 409
++A L KMGA IP ++PG+AT EY+ ++ F G + L ++A T+++ R
Sbjct: 342 DMAQNLKKMGASIPGIRPGRATSEYIERVLNRLTFLGAVFLGLVAIIPTVVESATRVPTF 401
Query: 410 EGFSIGFTSVLIIVGSIIELRRSYQAY 436
GF G TS+LI+VG I+ + Q Y
Sbjct: 402 RGF--GATSLLILVGVAIDTAKQVQTY 426
>gi|428320034|ref|YP_007117916.1| protein translocase subunit secY/sec61 alpha [Oscillatoria
nigro-viridis PCC 7112]
gi|428243714|gb|AFZ09500.1| protein translocase subunit secY/sec61 alpha [Oscillatoria
nigro-viridis PCC 7112]
Length = 434
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 217/430 (50%), Gaps = 27/430 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R R+ VT L+++ R+G +P+PG DR Q+ + +L
Sbjct: 10 TAQETFMQMAQAAGLRGRILVTIGLLILVRLGVHLPVPGIDRVAFAQNVQNSPLIGFLDL 69
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 132
G L F LGI P I ASI++Q+L +PSL L+K EG G KI ++SL
Sbjct: 70 FSGGGLSALGIFALGILPYINASIIVQLLTAALPSLEDLQKNEGEAGRRKISQITRYVSL 129
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
G+AIL+++ +A + P+ A S + + TA L G+M + W+ + ++E G G G+S
Sbjct: 130 GWAILQSIGIAIWVSPF---AQSPAPLFIAQTALALTAGSMFVMWVSELVTERGIGNGAS 186
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
L+I + I++ +L + + ++ LL VF + + V V EG R++ +
Sbjct: 187 LLIFINIVSVLPRSLGQTFELAQSGDTQVVGRVVVLLLVFLVTIVGIVFVQEGTRRIPI- 245
Query: 253 YYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
SA R+ E Y+P +N G+ P++ + +L PS LA L +PF
Sbjct: 246 ------ISARRQVGRKVYRESRSYLPLRLNQGGVMPIIFASSVLIVPSFLAQSLNNPFLV 299
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIADYLNKMGARIPNVK 367
V +L+P G PW Y Y + F+ F I N P +++ L KMGA IP ++
Sbjct: 300 QVANVLSPN---GPAPWAYALFYLTLILFFSYFYASLIVN-PVDMSQNLKKMGASIPGIR 355
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSI 426
PG+ T +Y+ K+ F G + L ++A T ++ + + GF G TS+LI+VG
Sbjct: 356 PGQKTSDYVEKVLNRLTFLGAIFLGLVAIVPTAVESAIGVQTFRGF--GATSLLILVGVA 413
Query: 427 IELRRSYQAY 436
IE + Q Y
Sbjct: 414 IETAKQIQTY 423
>gi|334120591|ref|ZP_08494670.1| preprotein translocase, SecY subunit [Microcoleus vaginatus FGP-2]
gi|333456193|gb|EGK84828.1| preprotein translocase, SecY subunit [Microcoleus vaginatus FGP-2]
Length = 434
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 216/430 (50%), Gaps = 27/430 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R R+ VT L+++ R+G +P+PG DR Q+ + +L
Sbjct: 10 TAQETFMQMAQAAGLRGRILVTIGLLILVRLGVHLPVPGIDRVAFAQNVENSPLIGFLDL 69
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 132
G L F LGI P I ASI++Q+L +PSL L+K EG G KI ++SL
Sbjct: 70 FSGGGLSALGIFALGILPYINASIIVQLLTAALPSLEDLQKNEGEAGRRKISQITRYVSL 129
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
G+AIL++V +A + P++ A + TA L G+M + W+ + ++E G G G+S
Sbjct: 130 GWAILQSVGIAIWVSPFAQAPAPLFIAQ---TALALTAGSMFVMWVSELVTERGIGNGAS 186
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
L+I + I++ +L + + ++ LL VF + + V V EG R++ +
Sbjct: 187 LLIFINIVSVLPRSLGQTFELAQSGDTQVVGRVVVLLLVFLVTIVGIVFVQEGTRRIPI- 245
Query: 253 YYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
SA R+ E Y+P +N G+ P++ + +L PS LA L +PF
Sbjct: 246 ------ISARRQVGRKVYRESRSYLPLRLNQGGVMPIIFASSVLIVPSFLAQSLNNPFLV 299
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIADYLNKMGARIPNVK 367
V +L+P G PW Y Y + F+ F I N P +++ L KMGA IP ++
Sbjct: 300 QVANVLSPN---GPAPWAYALFYLTLILFFSYFYASLIVN-PVDMSQNLKKMGASIPGIR 355
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSI 426
PG+ T +Y+ K+ F G + L ++A T ++ + + GF G TS+LI+VG
Sbjct: 356 PGQKTSDYVEKVLNRLTFLGAIFLGLVAIVPTAVESAIGVQTFRGF--GATSLLILVGVA 413
Query: 427 IELRRSYQAY 436
IE + Q Y
Sbjct: 414 IETAKQIQTY 423
>gi|209527123|ref|ZP_03275637.1| preprotein translocase, SecY subunit [Arthrospira maxima CS-328]
gi|209492463|gb|EDZ92804.1| preprotein translocase, SecY subunit [Arthrospira maxima CS-328]
Length = 438
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 222/447 (49%), Gaps = 58/447 (12%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD--------YLSF 65
A E+F + + +R R+ VT L+++ R+G F+P+PG DR+ ++ +L
Sbjct: 10 TAQETFMQMAQAAGLRGRILVTIGLLILVRLGVFLPIPGIDRQAFSENIQNTPFIGFLDL 69
Query: 66 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 124
SG G F A L F LGI P I ASI+MQ++ +P+L L+K EG G KI
Sbjct: 70 FSG-----GGFSA---LGIFALGILPYINASIIMQLMTAALPTLEDLQKNEGEAGRRKIS 121
Query: 125 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+++LG+AIL+++ +A + P++ + L G+M + W+ + I+E
Sbjct: 122 QITRYVALGWAILQSIGIAIWVSPFAQNPNQPQFIVMAEVVLALAAGSMFVMWVSELITE 181
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW----PFMLG----LLGVFTIVT 236
G G G+SL+I + I+ +L Q LGS++ ++G LL +F +
Sbjct: 182 RGIGNGASLLIFINIVA--------VLPQSLGSTIELAQSGDSAIVGRVVILLLIFLAMI 233
Query: 237 MWAVVVTEGCRKVKL----QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTY 292
+ V V EG R++ + + G KL RE S Y+P +N G+ P++ +
Sbjct: 234 VGIVFVQEGTRRIPIVSARRQVGRKLY---REKSS------YLPLRLNQGGVMPIIFASA 284
Query: 293 LLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPK 350
+L P+ ++ +P + L+P G PW+Y Y + F+ F + P
Sbjct: 285 VLILPASISQFANNPVLVQISTYLSPG---GPAPWLYIAFYLLMILFFSYFYASLIMNPV 341
Query: 351 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN- 409
++A L KMGA IP ++PG+AT EY+ ++ F G + L ++A T+++ R
Sbjct: 342 DMAQNLKKMGASIPGIRPGRATSEYIERVLNRLTFLGAVFLGLVAIIPTVVESATRVPTF 401
Query: 410 EGFSIGFTSVLIIVGSIIELRRSYQAY 436
GF G TS+LI+VG I+ + Q Y
Sbjct: 402 RGF--GATSLLILVGVAIDTAKQVQTY 426
>gi|284042824|ref|YP_003393164.1| preprotein translocase subunit SecY [Conexibacter woesei DSM 14684]
gi|283947045|gb|ADB49789.1| preprotein translocase, SecY subunit [Conexibacter woesei DSM
14684]
Length = 423
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 222/451 (49%), Gaps = 44/451 (9%)
Query: 12 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 71
LS++LN +F EIR++L TA+L+ + R+G IP PG + + + +F +G +
Sbjct: 2 LSTILN----AFTVPEIRKKLAFTALLLALYRLGSHIPAPGINSEAVEEIQRNFSNGGIL 57
Query: 72 ELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
+ G +++ F LGI P + ASI++Q+L +VPSL +L++EG G ++I Y
Sbjct: 58 NFLNLFSGGGLSRIALFALGIMPYVTASIILQLLTVVVPSLERLQREGEVGQQRITQYTR 117
Query: 129 WISLGFAILEAVIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTIS 183
++++G A +++ + A + +++ VM+ A L G M + W+ + I+
Sbjct: 118 YLTVGLAFAQSIAYVFLFRSFQQSAGASVIENFTLAKVMLIAICLTAGCMLVMWMGELIT 177
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW----PFMLGLLGVFTIVTMWA 239
+ G G G SL+I I+ G+ + + WW P ++ + + A
Sbjct: 178 QRGIGNGISLMIMASIVAGFPQGVRA-----------WWTSPDPVFKVMMPFLALAIIAA 226
Query: 240 VV-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 298
+V V EG R++ +QY + + + Y+P +N +G+ PV+ ++AFP
Sbjct: 227 IVFVQEGQRRIPVQYARRVIGQRMTQGG-----QTYLPLRVNMAGVIPVIFAASIMAFPP 281
Query: 299 ILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYL 356
+ ++ SP+ + +P W Y A F+ LF I P E AD L
Sbjct: 282 TIGQLINSPWANDMANFFSPSG------WAYLVGEAVFIILFTYMYTAITFNPVEQADNL 335
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
+ G IP V+PG+ T E+L +I A F G + L+++A TIL + + N F G
Sbjct: 336 KRYGGFIPGVRPGRPTAEFLDRILARLTFPGAIFLALVAAGPTIL---INQTNANFFFGG 392
Query: 417 TSVLIIVGSIIELRRSYQAYNVMPSLSKALR 447
TS+LI++G ++ + +A +M + LR
Sbjct: 393 TSILIVIGVALDTMKQLEAQLMMRNYEGFLR 423
>gi|378787335|gb|AFC39966.1| preprotein translocase subunit SecY [Porphyra umbilicalis]
Length = 411
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 222/427 (51%), Gaps = 45/427 (10%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDF 76
KS++R R+ T L++++R+G FIP+PG D + ++L+ SG G F
Sbjct: 4 KSDLRNRIVFTLFLLILARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 58
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFA 135
+ F LGI P I +SI+MQ+L I+P+L +L+KE G G +KI +++LG+A
Sbjct: 59 ST---IGIFALGIVPYINSSIVMQLLTKIIPTLEKLQKEEGELGRQKITQITRYLALGWA 115
Query: 136 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
L++ ++ + PY + + V + L G+M + W+ + I+E G G G+SL+I
Sbjct: 116 TLQSSAISIWVKPY---VFNWNFAFVCESILALTAGSMIIMWLSELITEKGIGNGASLLI 172
Query: 196 CVGILTG----YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
I++G +T++ + + +S+++ F++ +F ++ + + V EG R++K+
Sbjct: 173 FQNIVSGLPKNFTQSFFD--ANYNNTSIKFGLFIV----IFLLMIIITIFVQEGTRRIKI 226
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
+++ S I + Y+P +N G+ P++ + +A P+ L + +P
Sbjct: 227 ------ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPAYLTQLTQNPLVLQ 280
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPG 369
+ + P S+ Y +Y+ + F+ F I P++IA L KMGA IPN++PG
Sbjct: 281 ILYLFCPNGSL------YLVLYSALILFFSYFYTSIVMNPEDIATNLKKMGASIPNIRPG 334
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
+ATI+YL I F G L +A I++ + +I +G TS+LI+VG I+
Sbjct: 335 QATIDYLQVILNRLTFLGATFLFTVALIPFIIEK-VAQIQNLRGLGATSLLILVGVAIDT 393
Query: 430 RRSYQAY 436
+ Q Y
Sbjct: 394 AKQIQTY 400
>gi|319789258|ref|YP_004150891.1| preprotein translocase, SecY subunit [Thermovibrio ammonificans
HB-1]
gi|317113760|gb|ADU96250.1| preprotein translocase, SecY subunit [Thermovibrio ammonificans
HB-1]
Length = 444
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 217/433 (50%), Gaps = 27/433 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E+RRR T L+ + R+G IP+PG + + D+ G+V + D GA KL+
Sbjct: 15 ELRRRFLFTLALLAVFRLGAHIPVPGINVEAL-VDFFQRAQGTVFGMMDIFSGGALRKLT 73
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILEAVIV 142
F LG+ P I +SI+MQ+L +PS+ +L KE G G KI Y + ++ A ++A+ +
Sbjct: 74 IFALGVMPYISSSIIMQLLTVAIPSIEKLAKEEGEYGRRKINQYTRYGAVLLAFIQALGI 133
Query: 143 A----CYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
A + P + + + VT L G+ + W+ + I+E G G G SL+I
Sbjct: 134 AIGLESMTSPTGVPIVPNPGFTFLFVTVTTLTAGSTFLMWLGEKITEKGIGNGMSLLIFA 193
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
GI+ + ++L+ + + + +L ++ + ++ V + E R+V LQY
Sbjct: 194 GIVASIPSAVIRVLTMVKSGDMSLFK-LLTVVAIIVLMIAAIVYIQEAERRVPLQY---- 248
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 317
A + Y+P +NP+G+ P++ +L FP+ + + +P Q + E L
Sbjct: 249 -ARRTVGRQAVGRYTSYLPIKLNPAGVIPIIFAASILMFPATVVRFIHNPIAQSIYEALQ 307
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEY 375
P T++ Y +Y +F F F A + P+EIA+ LNK G IP V+ G T +Y
Sbjct: 308 PGTTL------YLVVYGALIFFFTYFYTAIVFNPEEIAENLNKAGGFIPGVRAGTDTAKY 361
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
L +I + F G + L+++A I+ ++++N F G T++LI+VG ++ + +A
Sbjct: 362 LDRIVSRLTFAGAVFLTLVALIPMII---VQKMNLPFYFGGTAILIVVGVALDTLKRMEA 418
Query: 436 YNVMPSLSKALRR 448
+ +M S L R
Sbjct: 419 FALMLSYEGFLGR 431
>gi|411119499|ref|ZP_11391879.1| protein translocase subunit secY/sec61 alpha [Oscillatoriales
cyanobacterium JSC-12]
gi|410711362|gb|EKQ68869.1| protein translocase subunit secY/sec61 alpha [Oscillatoriales
cyanobacterium JSC-12]
Length = 465
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 222/458 (48%), Gaps = 53/458 (11%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
+A E+F + + +R R+ +T ++++ R+G F+P+P DR+ Q + S ++
Sbjct: 10 SAQETFAQMAQAAGLRGRVLLTVGMLILVRLGIFLPIPDIDRQAFAQSVQNNPVISFLDI 69
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 132
G L F LGI P I ASI++Q+L +PSL L+K EG G KI +++L
Sbjct: 70 FAGGGLSALGIFALGILPYINASIILQLLTAALPSLENLQKNEGEAGRRKISQITRYVAL 129
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMV----------------------------- 163
G+A++++V +A + + AA + V+V
Sbjct: 130 GWAVVQSVGLAWWVVNSG--AAQIDGQQVLVQRAANGSFSFVTENGASIGFGSLVPFIAS 187
Query: 164 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP 223
TA L G+M + WI + ++E G G G+SL+I V I++G +L + L
Sbjct: 188 TALALTAGSMLVMWIGELVTERGIGNGASLLIVVSIVSGLPRSLGQTLELAQTGDRSLVG 247
Query: 224 FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVE--PYIPFNINP 281
++ LL VF ++ + V V EG R++ + SA R+ T +E Y+P +N
Sbjct: 248 GIIILLLVFLVMIVGIVFVQEGTRRIPI-------ISARRQVGRKTYLERSSYLPLRLNQ 300
Query: 282 SGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFN 341
SG+ P++ + +L P +A +P V L+P G PW+Y T Y + F+
Sbjct: 301 SGVMPIIFASAVLFLPVYIAEFTKNPLLSQVASYLSPS---GPTPWLYITFYLLLILFFS 357
Query: 342 IF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSST 399
F + P +++ L KMGA IP ++PGKAT +Y+ ++ F G + L ++A T
Sbjct: 358 YFWTSLVINPVDLSQNLKKMGASIPGIRPGKATSDYIERVLNRLTFLGAIFLGLVAIVPT 417
Query: 400 ILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
++ R GF G TS+LI+VG I+ + Q Y
Sbjct: 418 AVESATRVETFRGF--GATSLLIVVGVAIDTAKQIQTY 453
>gi|289423654|ref|ZP_06425453.1| preprotein translocase, SecY subunit [Peptostreptococcus anaerobius
653-L]
gi|429727991|ref|ZP_19262737.1| preprotein translocase, SecY subunit [Peptostreptococcus anaerobius
VPI 4330]
gi|289155904|gb|EFD04570.1| preprotein translocase, SecY subunit [Peptostreptococcus anaerobius
653-L]
gi|429150848|gb|EKX93742.1| preprotein translocase, SecY subunit [Peptostreptococcus anaerobius
VPI 4330]
Length = 422
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 217/440 (49%), Gaps = 25/440 (5%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+LN ++ +IR++L T ++I++ R+G IP+PG D +I + + +
Sbjct: 1 MLNKFKQALQIKDIRKKLVFTFLMIIVFRMGTTIPVPGIDTSIIKNMVANNSLLGLYNMF 60
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA + F LGI P I ASI++Q+L SL +L+K G +G +KI Y + +LG
Sbjct: 61 SGGAFSNFTIFALGIGPYITASIIIQLLTAGFESLKELQKSGEEGKKKINKYTRFTALGL 120
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
A+++A+ + + ++ +S + LV +M + W+ D I+E G G GSS++
Sbjct: 121 AVIQAIGITLGIVRRALKV--NSPFFIFTVIITLVAASMMVMWLGDRITEKGLGNGSSVL 178
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY- 253
I VGI++ T +SQ + WP + L+ V I + E RK+ +QY
Sbjct: 179 IFVGIIS-RTPIDIIAISQKTSQGIIKWPAIAVLVVVILITITGVTFINESTRKIPVQYA 237
Query: 254 ---YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
G K+ DS +IP +N SG+ P++ + +LA P +A +LG P Q
Sbjct: 238 KRVVGRKMYGG---DSS------HIPMKVNQSGVMPIIFASSILALPQTVA-LLGGPKMQ 287
Query: 311 H-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVK 367
V + N T G W Y +I + LF+ F I+ ++IA + G IP ++
Sbjct: 288 AIVNNLFNMSTDRGF--WTYRSIEIVLIVLFSYFYNTISFNTEDIAKNMKNSGGFIPGIR 345
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PG T YL I + G L I+A ++ HY++ ++G TS+LI+VG +
Sbjct: 346 PGNPTETYLNGILSKLTIVGAAFLGIMAMVPALITHYMQ---IPMNLGGTSLLIVVGVAL 402
Query: 428 ELRRSYQAYNVMPSLSKALR 447
EL+R ++ VM + L+
Sbjct: 403 ELKRQLESNLVMKNYQGFLK 422
>gi|210623208|ref|ZP_03293647.1| hypothetical protein CLOHIR_01597 [Clostridium hiranonis DSM 13275]
gi|210153745|gb|EEA84751.1| hypothetical protein CLOHIR_01597 [Clostridium hiranonis DSM 13275]
Length = 422
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 218/435 (50%), Gaps = 31/435 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG----SV 70
+L+ +++ EIR++L T +++V+ RIG IP+PG D +I Q V G S+
Sbjct: 1 MLSQIKQAWKLKEIRKKLLYTLMMVVVFRIGTTIPVPGIDTSIIKQ----MVEGNNLLSL 56
Query: 71 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ GA + F LGI P I ASI++Q+L SL +L+K G +G +K+ Y
Sbjct: 57 YNMFTGGAFSNFTLFALGIGPYITASIIIQLLTVGFESLKELQKSGEEGKKKMDKYTRCT 116
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
+L A ++A+ + + ++ S +V + LV +M + WI D I+E G G G
Sbjct: 117 ALALAFVQAIGITLGIVRSAL--KSDNVFFITTVIITLVSASMMVMWIGDRITEKGLGNG 174
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SS+II VGI++ + +Q+ + W +L L+ V + + + E RK+
Sbjct: 175 SSVIIFVGIISRIPIDGIAIANQIKSGATPIWAAIL-LVVVILLTILGVTFIQEATRKIP 233
Query: 251 LQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
+QY G K+ +IP +N SG+ P++ + +LA P +A +G+
Sbjct: 234 VQYAKRVVGRKMYGGQ---------SSHIPMKVNQSGVMPIIFASSILAMPQTIAMFMGT 284
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
Q V++ L+ T G W+Y +I + F+ F I+ ++I + G IP
Sbjct: 285 DAQQFVQQWLSGATEQGF--WIYRSIEILLIIFFSYFYTTISFNVEDITKNMKNGGGFIP 342
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PGK T +YL++I + G L ++A ++ HYL + S+ TS+LI+VG
Sbjct: 343 GIRPGKPTEDYLSRILSRLTLAGAAFLGVIAMIPALITHYL---SLPMSLAGTSLLIVVG 399
Query: 425 SIIELRRSYQAYNVM 439
+EL+R ++ VM
Sbjct: 400 VALELKRQLESNLVM 414
>gi|90994487|ref|YP_536977.1| preprotein translocase subunit SecY [Pyropia yezoensis]
gi|122194692|sp|Q1XDJ1.1|SECY_PORYE RecName: Full=Protein translocase subunit SecY
gi|90819051|dbj|BAE92420.1| Preprotein translocase subunit [Pyropia yezoensis]
Length = 411
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 220/427 (51%), Gaps = 45/427 (10%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDF 76
KS++R R+ T L+V++R+G FIP+PG D + ++L+ SG G F
Sbjct: 4 KSDLRNRIIFTLFLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 58
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFA 135
+ F LGI P I +SI+MQ+L IVP+L +L+KE G G +KI +++LG+A
Sbjct: 59 ST---IGIFALGIVPYINSSIVMQLLTKIVPNLEKLQKEEGELGRQKITQITRYLALGWA 115
Query: 136 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
L++ ++ + PY + + V + L G+M + W+ + I+E G G G+SL+I
Sbjct: 116 TLQSGAISIWVKPY---VFNWNFAFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLI 172
Query: 196 CVGILTG----YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
I++G +T++ + + +S+++ F + +F ++ + + V EG R++K+
Sbjct: 173 FQNIVSGLPKNFTQSFFD--ASYSNASLKFGLF----IAIFLLMIIITICVQEGTRRIKI 226
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
+++ S I + Y+P +N G+ P++ + +A PS L I+ +
Sbjct: 227 ------ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPSYLTQIIQNKTLLQ 280
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPG 369
+ + P S+ Y +Y + F+ F I P++IA L KMGA IPN++PG
Sbjct: 281 ILYLFCPNGSL------YLLLYCALILFFSYFYTSIVMNPEDIAINLKKMGASIPNIRPG 334
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
+ATI+YL I F G L +A I++ + +I +G TS+LI+VG I+
Sbjct: 335 QATIDYLQVILNRLTFLGASFLFTVALIPFIIEK-VTQIQNLRGLGATSLLILVGVAIDT 393
Query: 430 RRSYQAY 436
+ Q Y
Sbjct: 394 AKQIQTY 400
>gi|194477040|ref|YP_002049219.1| preprotein translocase SecY [Paulinella chromatophora]
gi|171192047|gb|ACB43009.1| preprotein translocase SecY [Paulinella chromatophora]
Length = 438
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 217/431 (50%), Gaps = 23/431 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+R R+ T L++I R+G +IP+PG DR Q +L+ + L F G L
Sbjct: 22 KNLRDRVITTIGLLLIIRLGIYIPVPGIDRVAF-QAFLNQGGQLIGFLDIFTGGGLSTLG 80
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIV 142
F LGI P I ASI++Q+L ++P L L+K EG G K+ +++ G+ +L++ +
Sbjct: 81 IFALGILPFINASIIIQLLTTVLPQLDDLQKNEGEAGRRKVSQITRYLAFGWGLLQSTVF 140
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
A PY++ S + V+ TA LV G++ + WI + I++ G GQG+SL+I + I+
Sbjct: 141 AFILRPYAMSGLSQPI-FVIQTALALVTGSIVVMWISEVITDRGIGQGASLVIFLNIVAT 199
Query: 203 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
L L + ++ L VF I + + V EG R++ + SA
Sbjct: 200 LPRALGSTLELVQTGDRHTLAGIIVLALVFLITILGIIFVQEGSRRI-------PIISAK 252
Query: 263 RE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 319
R+ + +T + Y+P +N G+ P++ + L+ P +A+I +P+ V LNP
Sbjct: 253 RQIEKTNLLTSRQSYLPLKLNAGGVMPIIFASALVFLPLTIANITKAPWLIIVASYLNPN 312
Query: 320 TSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
++ PW+Y ++ + F+ F + P +IA L + G IP V+PG ATI+Y+
Sbjct: 313 SNT---PWLYALLFFSLILGFSFFYTSLTINPTDIAVNLKRGGVAIPGVRPGSATIKYIG 369
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+Q GG+ L +A ++ + R +G +G TS+LI+VG I+ + +Q Y
Sbjct: 370 GVQNRLTLLGGVFLGAVAIIPAAVEGATQIRTFQG--LGATSLLILVGVAIDTAKQFQTY 427
Query: 437 NVMPSLSKALR 447
+ + +R
Sbjct: 428 VISQRYERMIR 438
>gi|354565812|ref|ZP_08984986.1| preprotein translocase, SecY subunit [Fischerella sp. JSC-11]
gi|353548685|gb|EHC18130.1| preprotein translocase, SecY subunit [Fischerella sp. JSC-11]
Length = 440
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/442 (31%), Positives = 228/442 (51%), Gaps = 44/442 (9%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL VT ++++ R+G IP+PG DR Q + + ++ S +++
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILIRLGIHIPIPGIDR----QAFAAAIN-SNNQV 63
Query: 74 GDF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSY 126
F G L F LGI P I ASI++Q+L +P L L+K EG G +I
Sbjct: 64 FSFLDIFSGGGLSALGVFALGILPYINASIIIQLLTAAIPYLENLQKNEGEAGRRRISQI 123
Query: 127 IWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
++SLG+AIL++V +A + L +A + V+ TA LV G+M + W + I+E G
Sbjct: 124 TRYVSLGWAILQSVFLAAFWL--RPFALNFGPVFVIETAVALVAGSMFVMWASEVITERG 181
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSV-----RWWP-FMLGLLGVFTIVTMWAV 240
G G+SL+I V I+ ++L ++ + GS R P +L L+ +FTIV + V
Sbjct: 182 VGNGASLLIFVNIVATLPKSLSDTIAYIQGSGQEIVRERVGPVIVLVLVFLFTIVGI--V 239
Query: 241 VVTEGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 298
V E R++ + SA R+ E Y+P +N G+ P++ +L+ P
Sbjct: 240 FVQEAIRRIPI-------ISARRQVGRRIFAEQRSYLPLRLNQGGVMPIIFAAAILSLPL 292
Query: 299 ILASILGSPFWQHVKEILNPETSVG-ARPWVYYTIYAFFVFLFNIFD---IANLPKEIAD 354
+A+ +P + I+N S G ++ WVY +Y + F+ F I N P ++A
Sbjct: 293 FIANFTKNP---ELANIINTYLSPGGSQSWVYALVYLVSIIFFSYFYSSLIVN-PVDVAQ 348
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 414
L KMG+ IP ++PGKAT EY+ +I F G + L ++A T ++ L + +
Sbjct: 349 NLKKMGSSIPGIRPGKATSEYIERILNRLTFLGAIFLGLIAIIPTAVETAL-GVPTFRGL 407
Query: 415 GFTSVLIIVGSIIELRRSYQAY 436
G TS+LI+VG IE + Q Y
Sbjct: 408 GATSLLILVGVAIETAKQVQTY 429
>gi|428217357|ref|YP_007101822.1| protein translocase subunit SecY [Pseudanabaena sp. PCC 7367]
gi|427989139|gb|AFY69394.1| protein translocase subunit secY/sec61 alpha [Pseudanabaena sp. PCC
7367]
Length = 435
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 216/432 (50%), Gaps = 31/432 (7%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
+A E+F + + +R RL VT ++V+ R+G +IPLPG DR ++ + L+ S ++ L
Sbjct: 10 SAQETFMQMAQAAGLRSRLLVTIGMLVLIRLGMYIPLPGIDRSVL--ETLARSSNTLGFL 67
Query: 74 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 130
F G L F LGI P I ASI+MQ+L +PSL L+K EG G KI Y ++
Sbjct: 68 NTFAGGGFTLLGVFALGILPFINASIIMQILAAALPSLENLQKNEGEAGRRKISQYTRYV 127
Query: 131 SLGFAILEAVIVACYSLPYSIYAAS---HSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
+L FA+L+ + ++ + + +I A + + + TA LV G+M + W + I+E G
Sbjct: 128 ALFFAVLQGIGISLFLI--NINATTIPDPGFQFIFETAIALVAGSMFVMWAGELITERGV 185
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G G+SL+I + I+ +L +S L +L LL +F + + V V EG R
Sbjct: 186 GNGASLLIFINIVAVLPSSLGDTIS-LTQQDSAMLGGVLLLLVIFLAMIVGIVFVQEGER 244
Query: 248 KVKLQYYGFKLASAA-REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
++++ Y ++ RE S Y+P +N G+ P++ + + P+IL+ + S
Sbjct: 245 RIQIIYARRQVGRKMYREQSS------YLPLKLNQGGVMPIIFASSVFFLPAILSDVFSS 298
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
Q V L P + W Y Y + F+ F I P +++ L KMGA IP
Sbjct: 299 VAMQRVSSFLTPGS------WGYVVTYLVLILAFSYFYSSIVLDPVDLSQNLKKMGASIP 352
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
V+PG AT Y++ + F G + L +A T + + IG TS+LIIVG
Sbjct: 353 GVRPGTATSTYISSVLNRLIFLGAIFLGAVAIIPTAFEQA-TGVTTFQGIGATSLLIIVG 411
Query: 425 SIIELRRSYQAY 436
IE R Q Y
Sbjct: 412 VAIETARQIQTY 423
>gi|218961413|ref|YP_001741188.1| preprotein translocase secY subunit, essential membrane protein
[Candidatus Cloacamonas acidaminovorans]
gi|167730070|emb|CAO80982.1| preprotein translocase secY subunit, essential membrane protein
[Candidatus Cloacamonas acidaminovorans str. Evry]
Length = 437
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 209/425 (49%), Gaps = 29/425 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
++++++ TA+ +V+ R+G FIPLPG + + + G G G +
Sbjct: 13 DLKKKILFTALFLVLYRLGSFIPLPGVNATALKAFFEGAREGGNTLFGLLDLFVGGNFER 72
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
S F LGI P I ASI++Q+L I+P +LRKEG DG +K+ + ++ A A+
Sbjct: 73 ASVFALGIMPYITASIVIQLLGSIIPYFEKLRKEGADGQKKLNQITRYGTVALAAFNALT 132
Query: 142 VACY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
+ + +L + + + H + LV G M + WI + I+E G G G SLII GI
Sbjct: 133 ITMWLTNLSGGVVPRPNFLFH-LTGIITLVTGTMIVMWIGEQITEHGIGNGISLIIFAGI 191
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 259
+ Y E +M+ ++ W + ++ + +VT + VTE RK+ +QY A
Sbjct: 192 IARYPEGFVRMIQKISVDPSYTWKAIAAVV-LMVLVTAAVIFVTEAVRKIPVQY-----A 245
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--SPFWQHVKEILN 317
YIP +N +G+ P++ +L FP+ +A++LG SPFW +K L+
Sbjct: 246 KRIVGRRVYGGQSTYIPLRVNTAGVIPIIFAQSVLMFPATIAALLGGDSPFWTTLKNWLS 305
Query: 318 PETSVGARPWVYYTI-YAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
P GA V YTI Y + F F A + P E+A+ + K G IP KPGK T E
Sbjct: 306 P----GA---VLYTILYVGLIIFFAYFYTAIVLNPTEMAENMVKYGGHIPGKKPGKKTAE 358
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ + G + + +A I+ + R++ F G T +LI+VG ++ + +
Sbjct: 359 YINSVLVRITLPGAIFFAFIALLPEIMSN---RLDLPFYFGGTGLLIVVGVALDTLQQIE 415
Query: 435 AYNVM 439
++ VM
Sbjct: 416 SHLVM 420
>gi|282898339|ref|ZP_06306330.1| SecY protein [Raphidiopsis brookii D9]
gi|281196870|gb|EFA71775.1| SecY protein [Raphidiopsis brookii D9]
Length = 437
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/436 (31%), Positives = 223/436 (51%), Gaps = 36/436 (8%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL--SFVSGSVD 71
A E+F + + +R RL VT ++++ R+G F+P+PG DR Q + + G +D
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGIDRERFAQAISGNNAIFGLLD 68
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 130
G L F LGI P I ASI++Q+L +PSL L+K EG G KI ++
Sbjct: 69 IFSGRGLS-TLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITRYV 127
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
SLG+AIL++ A +L +A + V TA L G+M + W + I+E G G G
Sbjct: 128 SLGWAILQST--AFSALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGIGNG 185
Query: 191 SSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
+SL+I V I+ ++L L Q+ G + +L L+ V TI+ + V V EG R+
Sbjct: 186 ASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFVATIIGI--VFVQEGIRR 243
Query: 249 VKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
+ + SA R+ + E ++P +N G+ P++ +L+ P ++A+
Sbjct: 244 IPI-------ISARRQVGRRVLAEQRSFLPLRLNQGGVMPIIFAAAILSLPLLIAN---- 292
Query: 307 PFWQHVK--EILNPETS-VGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMG 360
F ++V+ I+N S G+ WVY +Y + F+ F I N P ++A L KMG
Sbjct: 293 -FTKNVELANIVNTYLSPSGSSSWVYALVYMVSIIFFSYFYSSLILN-PVDVAQNLKKMG 350
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
+ IP ++PGKAT EY+ ++ F G + L ++A T ++ L + +G TS+L
Sbjct: 351 SSIPGIRPGKATSEYIERVSNRLTFLGAMFLGLVAIIPTAVESTL-NVPTFRGLGATSLL 409
Query: 421 IIVGSIIELRRSYQAY 436
I+VG I+ R Q Y
Sbjct: 410 ILVGVAIDTARQIQTY 425
>gi|300867116|ref|ZP_07111782.1| preprotein translocase subunit SecY [Oscillatoria sp. PCC 6506]
gi|300334871|emb|CBN56948.1| preprotein translocase subunit SecY [Oscillatoria sp. PCC 6506]
Length = 435
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 216/428 (50%), Gaps = 25/428 (5%)
Query: 19 AAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
A E+F + + +R R+ VT L+++ R+G +P+PG DR Q+ + +L
Sbjct: 11 AQETFLQMAQAAGLRGRILVTIGLLILVRLGVHLPVPGIDRVAFAQNVQNSPLIGFLDLF 70
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLG 133
G L F LGI P I ASI++Q+L +PSL +L+K EG G KI +++LG
Sbjct: 71 SGGGLSALGIFALGILPYINASIIIQLLTAALPSLEELQKNEGEAGRRKISQITRYVALG 130
Query: 134 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
+A+L++V +A + P++ A + TA L G+M + W+ + ++E G G G+SL
Sbjct: 131 WAVLQSVGIAIWVSPFAQEPAPLFIAQ---TALALTAGSMFVMWVSELVTERGIGNGASL 187
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
+I + I+ +L + + + + ++ LL VF ++ + V V EG R++ +
Sbjct: 188 LIFINIVAVLPRSLGQTVELAQSGNSQIVGQVIVLLLVFLVMIVGIVFVQEGTRRIPI-- 245
Query: 254 YGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
SA R+ E Y+P +N G+ P++ + +L P+ L +P
Sbjct: 246 -----ISARRQVGRKVYREKSSYLPLRLNQGGVMPIIFASAVLILPASLGQFTNNPILVQ 300
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGARIPNVKP 368
V LNP G+ PW+Y +Y + F+ F I N P +++ L KMGA IP ++P
Sbjct: 301 VANALNPN---GSMPWLYALVYLVLILFFSYFYASLIVN-PVDMSQNLKKMGASIPGIRP 356
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G+ T EY+ ++ F G + L ++A T ++ + +G TS+LI+VG I+
Sbjct: 357 GQKTSEYVERVLNRLTFLGAIFLGLVAIVPTAVESA-TNVTTFRGLGATSLLILVGVAID 415
Query: 429 LRRSYQAY 436
+ Q Y
Sbjct: 416 TAKQIQTY 423
>gi|116266128|gb|ABJ91302.1| preprotein translocase subunit [Pyropia yezoensis]
Length = 411
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 213/424 (50%), Gaps = 39/424 (9%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDF 76
KS++R R+ T L+V++R+G FIP+PG D + ++L+ SG G F
Sbjct: 4 KSDLRNRIIFTLFLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 58
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFA 135
+ F LGI P I +SI+MQ+L IVP+L +L+KE G G +KI +++LG+A
Sbjct: 59 ST---IGIFALGIVPYINSSIVMQLLTKIVPNLEKLQKEEGELGRQKITQITRYLALGWA 115
Query: 136 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
L++ ++ + PY + + V + L G+M + W+ + I+E G G G+SL+I
Sbjct: 116 TLQSGTISIWVKPY---VFNWNFAFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLI 172
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKLQYY 254
I++G + + +S GL + +F ++ + + V EG R++K+
Sbjct: 173 FQNIVSGLPKNFTQ---SFFDASYSNASLKFGLSIAIFLLMIIITICVQEGTRRIKI--- 226
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 314
+++ S I + Y+P +N G+ P++ + +A PS L I+ + +
Sbjct: 227 ---ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPSYLTQIIQNKTLLQILY 283
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ P S+ Y +Y + F+ F I P++IA L KMGA IPN++PG+AT
Sbjct: 284 LFCPNGSL------YLLLYCALILFFSYFYTSIVMNPEDIAINLKKMGASIPNIRPGQAT 337
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
I+YL I F G L +A I++ + +I +G TS+L +VG I+ +
Sbjct: 338 IDYLQVILNRLTFLGASFLFTVALIPFIIEK-VTQIQNLRGLGATSLLTLVGVAIDTAKQ 396
Query: 433 YQAY 436
Q Y
Sbjct: 397 IQTY 400
>gi|119484814|ref|ZP_01619296.1| preprotein translocase SecY [Lyngbya sp. PCC 8106]
gi|119457632|gb|EAW38756.1| preprotein translocase SecY [Lyngbya sp. PCC 8106]
Length = 435
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 212/438 (48%), Gaps = 43/438 (9%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--------- 64
A E+F + + +R R+ VT L+++ R+G F+P+PG DR + +
Sbjct: 10 TAQETFLQMAQAAGLRGRILVTIGLLILVRLGVFLPIPGIDRAAFSANIQNSPVIGFLDL 69
Query: 65 FVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKI 123
FV G + LG F LGI P I ASI+MQ++ +P+L L+K EG G KI
Sbjct: 70 FVGGGLSALG---------IFALGILPFINASIIMQLMTAALPTLEDLQKNEGEAGRRKI 120
Query: 124 KSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTIS 183
+++ G+++L+++ +A + P++ + V++ L GAM + W+ + I+
Sbjct: 121 SQITRYVAFGWSVLQSIGLALWVSPFAESPGPLFMAEVVLA---LSAGAMFVMWVSELIT 177
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 243
E G G G+SL+I V I+ +L + ++ LL +F + + V V
Sbjct: 178 ERGIGNGASLLIFVNIVAVLPRSLGNTIELAQSGDRAIVGRVIILLLIFLAMIVGIVFVQ 237
Query: 244 EGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
EG R++ + SA R+ E Y+P +N G+ P++ + +L P+ L+
Sbjct: 238 EGTRRIPI-------VSARRQVGRKLYREKTSYLPLRLNQGGVMPIIFASAVLILPASLS 290
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKM 359
+P + L+P G PW+Y Y + F+ F + P ++A L KM
Sbjct: 291 QFTNNPILVQIATALSPS---GPTPWLYAAFYLVLILFFSYFYASLILQPVDMAQNLKKM 347
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTS 418
GA IP ++PG+AT EY+ ++ F G + L +A T+++ R GF G TS
Sbjct: 348 GASIPGIRPGRATSEYIERVLNRLTFLGAIFLGFVAIIPTVVETATRVPTFRGF--GATS 405
Query: 419 VLIIVGSIIELRRSYQAY 436
+LI+VG I+ + Q Y
Sbjct: 406 LLILVGVAIDTAKQVQTY 423
>gi|427714140|ref|YP_007062764.1| protein translocase subunit SecY [Synechococcus sp. PCC 6312]
gi|427378269|gb|AFY62221.1| protein translocase subunit secY/sec61 alpha [Synechococcus sp. PCC
6312]
Length = 436
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 219/433 (50%), Gaps = 32/433 (7%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
+A E+F + + +R R+ VT L+++ R+G ++P+PG DR++ + + SV
Sbjct: 10 SAQETFMQMAQAAGLRSRVLVTLGLLILVRLGIYLPVPGIDRQVFAA---AVQNNSVIRF 66
Query: 74 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWW 129
D G L F LGI P I ASI+MQ++ +PSL +L+K EG G KI +
Sbjct: 67 LDIFSGGGISALGIFALGILPYINASIIMQLMTAALPSLERLQKDEGEAGRRKISQITRY 126
Query: 130 ISLGFAILEAVIVACY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
++LG+AI+++ +A + S+P + A + + TA L G+M + W+ + I+E G
Sbjct: 127 VALGWAIIQSTGIAIFVNSIPGA--ALTPGSLFLAETALALTAGSMFVMWVSELITERGI 184
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G G+SL+I + I+ ++ + ++ L S ++ L VF ++ + V V EG R
Sbjct: 185 GNGASLLIFLSIVAYLPSSVGQTIA--LAESGGSIGGIIVLALVFLVMIVGIVFVQEGTR 242
Query: 248 KVKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
++ + SA R+ E Y+P +N G+ P++ + +L PS LA
Sbjct: 243 RIPI-------VSARRQVGRRLYREQTSYLPLRLNQGGVMPIIFASAMLILPSTLAQFSQ 295
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARI 363
+ V L+P G PWVY Y + F+ F + P +++ L KMGA I
Sbjct: 296 NAVVAQVAAYLSPG---GPTPWVYVMFYLVLILFFSYFYASLVVNPVDMSQNLKKMGASI 352
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PGKAT +Y+ K+ G + L ++A T ++ R+ +G TS+LI+V
Sbjct: 353 PGIRPGKATSDYIEKVLNRLTLLGAIFLGLVAIVPTAVESA-TRVTTFQGLGATSLLILV 411
Query: 424 GSIIELRRSYQAY 436
G I+ + Q Y
Sbjct: 412 GVAIDTAKQIQTY 424
>gi|225165493|ref|ZP_03727319.1| preprotein translocase, SecY subunit [Diplosphaera colitermitum
TAV2]
gi|224800270|gb|EEG18674.1| preprotein translocase, SecY subunit [Diplosphaera colitermitum
TAV2]
Length = 520
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 231/464 (49%), Gaps = 42/464 (9%)
Query: 3 KNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY 62
K++ N LS+V + A S E+R R+F T L+ ++R+G IPLPG D R + +
Sbjct: 8 KSKIENPHFLSAVFSAFANSLKIPELRSRIFYTLALLFVARVGAHIPLPGLDPRPLEAFF 67
Query: 63 LSFVSGSVDELGDF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEG 116
V+G+ L GA +K + LGI P I ASI+ Q++ +VPSL +L++EG
Sbjct: 68 ADQVTGAGGALVGLYNMFTGGALMKGAVCALGIMPYISASIIFQLMTAVVPSLARLQQEG 127
Query: 117 LDGHEKIKSYIWWISLGFAILE-AVIVACYSLPYSIYAASHSVKH------------VMV 163
G +K+ Y + ++ +++ A+++ P ++ + + ++
Sbjct: 128 DVGRQKLSQYTRYATVLICLIQGALLILALENPTQLFGEGYDIARYGEIVLVDRTWFLIS 187
Query: 164 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI---LTGYTETLYKMLSQLLGS--- 217
+ + G M ++W+ + I++ G G G SL+I +GI L G TL+ +L +G+
Sbjct: 188 SVIFMTAGTMLLTWLGEQITQRGIGNGISLLITIGIISDLPGAMGTLWTLLRAPVGTQGI 247
Query: 218 SVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPF 277
S+ FM+ L F VTM ++V +G RK+ +QY A + + ++P
Sbjct: 248 SMISLTFMVIL---FFAVTMGIIMVVQGQRKIPVQY-----AKRVVGNKVMGGQNSFLPL 299
Query: 278 NINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFV 337
+N SG+ PV+ + +L FP + LG+ F ++ ++ ++ WVYY +
Sbjct: 300 KVNYSGVMPVIFASAILLFPQQIFRYLGAAF--NLPFLIEFSNNLMRGHWVYYVTMTLLI 357
Query: 338 FLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILA 395
F+ F ++ + P +IA+ L K G IP V+PG+ T ++L + G + L+I+A
Sbjct: 358 LFFSYFWVSVMFKPIQIAEDLKKYGGYIPGVRPGEPTAKFLDFVMTRITLAGAIFLTIIA 417
Query: 396 TSSTILDHYL---RRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
L+ L +RI+ F G T +LI VG I++ + + +
Sbjct: 418 VFPDFLNAELNVPQRISSFF--GGTGMLITVGVILDTMKQIETF 459
>gi|434404997|ref|YP_007147882.1| protein translocase subunit secY/sec61 alpha [Cylindrospermum
stagnale PCC 7417]
gi|428259252|gb|AFZ25202.1| protein translocase subunit secY/sec61 alpha [Cylindrospermum
stagnale PCC 7417]
Length = 437
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 136/437 (31%), Positives = 225/437 (51%), Gaps = 38/437 (8%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL VT ++++ R+G F+P+PG +R + + +SG+
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGINR----ERFSEAISGNNSIF 64
Query: 74 GDF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 127
G G L L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 65 GLLDIFSGRGLSTLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQIT 124
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
++++G+AI+++V A +L +A + V TA L G+M + W + I+E G
Sbjct: 125 RYVTVGWAIVQSV--AFSALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGI 182
Query: 188 GQGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G+SL+I V I+ ++L L Q+ G + +L L+ + TI+ + V V EG
Sbjct: 183 GNGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFLATIIGI--VFVQEG 240
Query: 246 CRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
R++ + SA R+ + E Y+P +N G+ P++ +L+ P ++A+
Sbjct: 241 IRRIPI-------ISARRQVGRRVLAEQRSYLPLRLNSGGVMPIIFAAAILSLPLLIANF 293
Query: 304 LGSPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKM 359
+P + V L+P G+ PWVY +Y + F+ F I N P ++A L KM
Sbjct: 294 TKNPDLANIVNTYLSPS---GSAPWVYALVYLTSIVFFSYFYSSLILN-PVDVAQNLKKM 349
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G+ IP ++PGKAT EY+ ++ F G + L ++A T ++ L + +G TS+
Sbjct: 350 GSSIPGIRPGKATSEYIERVTNRLTFLGAIFLGLVAIIPTAVESGL-NVPTFKGLGATSL 408
Query: 420 LIIVGSIIELRRSYQAY 436
LI+VG I+ + Q Y
Sbjct: 409 LILVGVAIDTAKQIQTY 425
>gi|262197168|ref|YP_003268377.1| preprotein translocase subunit SecY [Haliangium ochraceum DSM
14365]
gi|262080515|gb|ACY16484.1| preprotein translocase, SecY subunit [Haliangium ochraceum DSM
14365]
Length = 448
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 210/428 (49%), Gaps = 37/428 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
E+R+R+ T ++ + RIG F+ LPG +R + L G+ LG F GA +
Sbjct: 13 ELRKRILFTLGMLAVYRIGIFVTLPGVNR--VEMQNLISTGGTGTFLGLFSVFSGGALEQ 70
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
LS F LGI P I ASI++Q+L +VP L QL KEG G +KI Y + ++G +I++AV
Sbjct: 71 LSIFALGIMPYISASIILQLLTVVVPKLDQLNKEGEQGRKKINQYTRYGTIGLSIVQAVF 130
Query: 142 VACY----SLPYSIYAASHSVK------HVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
++ + Y+A V H+M T L G + W+ + I+E G G G
Sbjct: 131 LSSWLVGLGRGGGGYSAGEVVNDPGMWFHIM-TVLTLTTGTAFLMWLGEQITERGIGNGI 189
Query: 192 SLIICVGILTGYTETLYKMLSQ-LLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SL+I GI+ G + L ++ + G + +L L+ V TI T+ R++
Sbjct: 190 SLLIFAGIVAGMPDALTQLFGRSSTGDYDLFMLLVLLLIAVGTIATI--CYFERAHRRIP 247
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
+QY + + + ++P IN SG+ P + + +L FP+ +A+++G+P+ Q
Sbjct: 248 VQYTKRMVGRKMYAGT-----QTHLPLKINVSGVIPPIFASSILMFPAQIANMVGTPWMQ 302
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKP 368
V LNP W Y IY + F F A P ++AD L K G IP ++P
Sbjct: 303 SVANALNPND------WRYNVIYVGLIVFFTFFYTAVTFNPVDVADNLKKSGGFIPGIRP 356
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
GK T EY+ + G + LS + +L ++++ F G T +LI+VG ++
Sbjct: 357 GKKTAEYIDYVLTRITAAGAVYLSAVCLVPALLQNWMQ---VPFYFGGTGLLIVVGVALD 413
Query: 429 LRRSYQAY 436
+ +++
Sbjct: 414 TVQQIESH 421
>gi|239636213|ref|ZP_04677217.1| preprotein translocase, SecY subunit [Staphylococcus warneri
L37603]
gi|239598229|gb|EEQ80722.1| preprotein translocase, SecY subunit [Staphylococcus warneri
L37603]
Length = 431
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 211/425 (49%), Gaps = 24/425 (5%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 78
SFFK+ E+R ++F T ++VI +IG +IP PG + Q G D L FG A
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPNAFDQAAKG-SQGVTDLLNTFGGGA 65
Query: 79 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 66 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGDVGRRKINNVTRYFAIILAFI 125
Query: 138 EAVIVACY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+++ ++ +L SHSV ++ A L G + W+ D I++ G G G SLII
Sbjct: 126 QSIGMSFQFNNLYGGRLIVSHSVYSYLLIALTLTAGTAFLIWLGDQITQFGVGNGISLII 185
Query: 196 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
GIL+ ++ + Q +S+ W ++ L+ ++T+ A+ V E RK+ +
Sbjct: 186 FAGILSTLPSSIIQAGQQAFVGQEDTSLAWLK-IVALIVALVLLTIGAIFVLEAKRKIPI 244
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 310
QY K +A R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 245 QYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQ 298
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGK 370
+ + NP +++G +Y + F + + + P+++AD L K G+ +P ++PG+
Sbjct: 299 QIADTANPSSNIGM--VIYIVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGE 354
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
T +Y+TK+ F G + L+++A + ++ + IG TS+LI++G IE
Sbjct: 355 QTKKYITKVLYRLTFVGSIFLAVIAILPILATKFM-GLPRSIQIGGTSLLIVIGVAIETM 413
Query: 431 RSYQA 435
+S +A
Sbjct: 414 KSLEA 418
>gi|228474808|ref|ZP_04059539.1| preprotein translocase, SecY subunit [Staphylococcus hominis SK119]
gi|314935852|ref|ZP_07843204.1| preprotein translocase, SecY subunit [Staphylococcus hominis subsp.
hominis C80]
gi|418620259|ref|ZP_13183065.1| preprotein translocase, SecY subunit [Staphylococcus hominis
VCU122]
gi|228271471|gb|EEK12839.1| preprotein translocase, SecY subunit [Staphylococcus hominis SK119]
gi|313656417|gb|EFS20157.1| preprotein translocase, SecY subunit [Staphylococcus hominis subsp.
hominis C80]
gi|374822867|gb|EHR86879.1| preprotein translocase, SecY subunit [Staphylococcus hominis
VCU122]
Length = 430
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 212/427 (49%), Gaps = 29/427 (6%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 78
SFFK+ E+R ++F T ++VI +IG +IP PG + P + G L FG A
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPE--PFEQQGSDQGVAALLNTFGGGA 64
Query: 79 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
S F +GI P I ASI+MQ+L IVP + K+G G K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEVGKRKLSNVTRYFAIILAFI 124
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMS-----WICDTISESGFGQGSS 192
+++ +A ++ Y + H V ++LL+ +T W+ D I++ G G G S
Sbjct: 125 QSIGMA---FQFNNYLGGKLIIHQSVMSYLLIAVVLTTGTAFLIWLGDQITQFGVGNGIS 181
Query: 193 LIICVGILTGYTETLYKMLSQLL---GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
+II GIL+ ++ + + Q + W ++GL+ ++T+ A+ V E RK+
Sbjct: 182 IIIFAGILSTLPSSIIQFVQQAFVGNDDTTLAWLKVIGLIVGLILLTIGAIYVLEAKRKI 241
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 309
+QY K SA R S T Y+P +N +G+ PV+ P L W
Sbjct: 242 PIQYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKADW 295
Query: 310 -QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKP 368
Q++ E NP + G VY + F + + + P+++AD L K G+ +P ++P
Sbjct: 296 AQNIAEYANPSNTYGM--IVYVILIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRP 351
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G+ T +Y+TK+ F G + L+++A I ++ + + IG TS+LI++G IE
Sbjct: 352 GEQTKKYITKVLYRLTFVGSIFLAVIAILPIIATKFM-NLPQSIQIGGTSLLIVIGVAIE 410
Query: 429 LRRSYQA 435
+S +A
Sbjct: 411 TMKSLEA 417
>gi|428213124|ref|YP_007086268.1| protein translocase subunit SecY [Oscillatoria acuminata PCC 6304]
gi|428001505|gb|AFY82348.1| protein translocase subunit secY/sec61 alpha [Oscillatoria
acuminata PCC 6304]
Length = 421
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 217/422 (51%), Gaps = 34/422 (8%)
Query: 28 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS----VDELGDFGAELKLS 83
+R RL +T ++V+ R+G +IP+PG D + + + + GS +L G L
Sbjct: 9 LRGRLLLTIGMLVLVRLGIWIPVPGIDL----ERFQANIDGSPLIGFLDLFSGGGLRALG 64
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIV 142
F LGI P I ASI+MQ+L +P+L L+K EG G KI Y +++LG+A+L+++ +
Sbjct: 65 IFALGIIPYINASIIMQLLTAALPTLEDLQKNEGEAGRRKISQYTRFVALGWALLQSIGI 124
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
+ + ++ + +V TA L G+M + W+ + I+E G G G+SL+I V I+
Sbjct: 125 SIWVGAFAETPDPGFLFYVQ-TAVALTTGSMFVMWVSELITERGVGNGASLLIFVNIVAV 183
Query: 203 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL----QYYGFKL 258
+L + +Q + P ++ +L +F I + V V EG R++ + + G KL
Sbjct: 184 LPNSLGQTFAQAREDNTIVGPVLILML-IFLITIVGIVFVQEGTRRIPIISARRQVGRKL 242
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
RE S Y+P +N G+ P++ + +L P+ LA + + + L+P
Sbjct: 243 Y---REKSS------YLPLRLNQGGVMPIIFASAVLILPASLAQFTQNNWLITISSYLSP 293
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIADYLNKMGARIPNVKPGKATIEY 375
G P+VY Y + F+ F I N P ++A L KMGA IP ++PG+AT EY
Sbjct: 294 S---GRAPFVYAAFYLTLILFFSYFYASLIVN-PVDMAQNLKKMGASIPGIRPGRATTEY 349
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQ 434
+ ++ F G + L ++A T ++ R +GF G TS+LI+VG I+ + Q
Sbjct: 350 VERVLNRLTFLGAIFLGMVAIVPTAVESATGVRTFQGF--GATSLLILVGVAIDTAKQIQ 407
Query: 435 AY 436
Y
Sbjct: 408 TY 409
>gi|417644063|ref|ZP_12294082.1| preprotein translocase, SecY subunit [Staphylococcus warneri
VCU121]
gi|445059046|ref|YP_007384450.1| preprotein translocase subunit SecY [Staphylococcus warneri SG1]
gi|330685127|gb|EGG96791.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU121]
gi|443425103|gb|AGC90006.1| preprotein translocase subunit SecY [Staphylococcus warneri SG1]
Length = 431
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 211/425 (49%), Gaps = 24/425 (5%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 78
SFFK+ E+R ++F T ++VI +IG +IP PG + Q G D L FG A
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPNAFDQAAKG-SQGVTDLLNTFGGGA 65
Query: 79 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 66 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGDVGRRKINNVTRYFAIILAFI 125
Query: 138 EAVIVACY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+++ ++ +L SHSV ++ A L G + W+ D I++ G G G SLII
Sbjct: 126 QSIGMSFQFNNLYGGRLIVSHSVYSYLLIALTLTAGTAFLIWLGDQITQFGVGNGISLII 185
Query: 196 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
GIL+ ++ + Q +S+ W ++ L+ ++T+ A+ V E RK+ +
Sbjct: 186 FAGILSTLPSSIIQAGQQAFVGQEDTSLAWLK-IVALIVALVLLTVGAIFVLEAKRKIPI 244
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 310
QY K +A R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 245 QYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQ 298
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGK 370
+ + NP +++G +Y + F + + + P+++AD L K G+ +P ++PG+
Sbjct: 299 QIADTANPSSNIGM--VIYIVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGE 354
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
T +Y+TK+ F G + L+++A + ++ + IG TS+LI++G IE
Sbjct: 355 QTKKYITKVLYRLTFVGSIFLAVIAILPILATKFM-GLPRSIQIGGTSLLIVIGVAIETM 413
Query: 431 RSYQA 435
+S +A
Sbjct: 414 KSLEA 418
>gi|414076527|ref|YP_006995845.1| preprotein translocase subunit SecY [Anabaena sp. 90]
gi|413969943|gb|AFW94032.1| preprotein translocase subunit SecY [Anabaena sp. 90]
Length = 437
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 224/436 (51%), Gaps = 36/436 (8%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL VT ++++ R+G F+P+PG DR + +SG+
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGIDR----PKFAEAISGNNSIF 64
Query: 74 GDF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 127
G G L L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 65 GLLDIFSGRGLSTLGVFALGILPFINASIIIQLLTSALPSLENLQKNEGEAGRRKISQIT 124
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
++++ +AI+++V A +L +A + V TA L G+M + W + I+E G
Sbjct: 125 RYVTVIWAIIQSV--AFSALFLQQFAKTPGPIFVAETAIALTAGSMFVMWASELITERGI 182
Query: 188 GQGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G+SL+I V I+ ++L L Q+ G + +L ++ +FTIV + V V EG
Sbjct: 183 GNGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVVVFMFTIVGI--VFVQEG 240
Query: 246 CRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
R++ + SA R+ + E Y+P +N G+ P++ +L+ P ++A+
Sbjct: 241 MRRIPI-------ISARRQVGRRVLAEQRSYLPLRLNSGGVMPIIFAAAILSLPLLVANF 293
Query: 304 LGSPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMG 360
+P + V L+P G+ PWVY +Y + F+ F + P ++A L KMG
Sbjct: 294 TKNPELANIVNTYLSPG---GSAPWVYALVYLTSIVFFSYFYSSLILNPVDVAQNLKKMG 350
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
+ IP ++PGKAT EY+ ++ F G + L ++A T ++ L ++ +G TS+L
Sbjct: 351 SSIPGIRPGKATSEYIERVTNRLTFLGAIFLGLVAIIPTAVESAL-KVPTFKGLGATSLL 409
Query: 421 IIVGSIIELRRSYQAY 436
I+VG I+ + Q Y
Sbjct: 410 ILVGVAIDTAKQIQTY 425
>gi|260655363|ref|ZP_05860851.1| preprotein translocase, SecY subunit [Jonquetella anthropi E3_33
E1]
gi|424845175|ref|ZP_18269786.1| preprotein translocase, SecY subunit [Jonquetella anthropi DSM
22815]
gi|260629811|gb|EEX48005.1| preprotein translocase, SecY subunit [Jonquetella anthropi E3_33
E1]
gi|363986613|gb|EHM13443.1| preprotein translocase, SecY subunit [Jonquetella anthropi DSM
22815]
Length = 432
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 209/437 (47%), Gaps = 21/437 (4%)
Query: 16 LNNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL-SFVSGSVDEL 73
+ N+ FK E++RR+ T +++++ RIG IP PG D + + + V G +D
Sbjct: 1 MANSFRDVFKLPELKRRIIFTLMMLLVFRIGAHIPTPGIDTAAMSHAFAGNGVLGFLDMF 60
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
GA + S F LG++P I ASI+MQ+ C I P+L +++KEG G +K+ Y W ++
Sbjct: 61 AG-GALRRFSVFSLGVAPYINASIVMQLACVIFPTLERMQKEGPQGQKKLTQYTRWGAIL 119
Query: 134 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
F +A+ + + +++ V + +V G++ + W+ + IS+ G G G S+
Sbjct: 120 FGFAQAIGLVFWLRRLGVFSGGSMDFFVAICT--VVAGSIAVMWLGEEISDHGIGNGISV 177
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
II GI+ + E + + L V ML L + V AV++ EG R++ +QY
Sbjct: 178 IIYAGIVARFPEGVIRTFGLLRDGQVGLIT-MLVALAIMVGVLAGAVLLQEGQRRLPVQY 236
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
A + +IP IN G+ P++ + LL FP + S
Sbjct: 237 -----AKRVVGNRVYGGQSTFIPLRINQGGVMPIIFASSLLIFPYTILKFFDSQSVNRAA 291
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
E L P + W+Y +Y + F F A + P E+A+ + K G I ++PGK
Sbjct: 292 EALAPGS------WLYSVLYVILIVFFTYFYTAMVFNPAEVAENMKKNGGFILGIRPGKP 345
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +Y+ ++ G +L ++A +L + + F G T+VLI+VG +E+ +
Sbjct: 346 TADYIERVATRITMVGAAMLVVIALVPNVLTNVFGMTS--FYFGGTAVLIVVGVALEIVQ 403
Query: 432 SYQAYNVMPSLSKALRR 448
++ +M L+R
Sbjct: 404 QVESQLLMRHYEGILKR 420
>gi|410727982|ref|ZP_11366175.1| preprotein translocase, SecY subunit [Clostridium sp. Maddingley
MBC34-26]
gi|410597542|gb|EKQ52153.1| preprotein translocase, SecY subunit [Clostridium sp. Maddingley
MBC34-26]
Length = 433
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 224/447 (50%), Gaps = 44/447 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F EIR+R+ T +L+ + R+G +PLPG I DYLS +S S LG
Sbjct: 1 MLQTLRNAFKVPEIRKRILWTILLVAVFRMGSHVPLPG-----INSDYLSKLSQSGGLLG 55
Query: 75 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
+ GA + S LG+ P I ASI++Q+L +P L QL KEG G +KI++ +
Sbjct: 56 FYDMLSGGAFSRSSILALGVMPYINASIIIQLLTVAIPQLEQLSKEGDTGRKKIQNATRY 115
Query: 130 ISLGFAILEAVIVACYSLPYSIYA---------ASHSVKHVMVTAFLLVCGAMTMSWICD 180
+SLG A + L Y IYA +S++ V+V F LV G W+ D
Sbjct: 116 VSLGIAFI---------LAYGIYATISSSGATVGLNSIQKVIVV-FALVVGTTFCMWLGD 165
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLS-QLLGSSVRWWPFMLGLLGVFTIVTMWA 239
++ G G G+S++I V I++ T+ M++ Q GS+ + G+ V + T+
Sbjct: 166 QLTVKGIGNGTSVLIFVNIISRVPTTIASMMTLQQAGSASIIEIVLFGVFIVLLLATILY 225
Query: 240 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
++E R++ +QY G K AS + + +IP +I S + ++ + ++ FP
Sbjct: 226 FSLSE--RRIPVQYAG-KFAS-GNSNMVKAQSATHIPLSIIGSAVLAIIFSMSVMDFPKT 281
Query: 300 LASILGSPFWQHVKE-----ILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEI 352
+A++ G + KE + NP + + W+Y +YA FN F I P E+
Sbjct: 282 IATLFGG-IGESQKEWAKWILSNPTSVFNQKSWMYVVLYAILTIFFNWFYMQITFKPDEM 340
Query: 353 ADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGF 412
++ L+K +P V+PG+ T Y ++ + F GG+L +ILA + ++ +Y + N F
Sbjct: 341 SENLHKSAGFVPGVRPGEETTVYFERVLSRLAFIGGILAAILAVTPVLIQNYTQFQNIAF 400
Query: 413 SIGFTSVLIIVGSIIELRRSYQAYNVM 439
S T +LI++ ++ R ++ V+
Sbjct: 401 S--GTGLLIVINVALDFTRKVESQMVV 425
>gi|196228474|ref|ZP_03127341.1| preprotein translocase, SecY subunit [Chthoniobacter flavus
Ellin428]
gi|196227877|gb|EDY22380.1| preprotein translocase, SecY subunit [Chthoniobacter flavus
Ellin428]
Length = 504
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 225/463 (48%), Gaps = 48/463 (10%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS----GSVDELGD 75
+ +F E+R R+ T +L+V+ R+G I PG + ++ + + + VS G+ L +
Sbjct: 6 SNTFKIPELRSRIIFTLILLVVVRVGAVITCPGVNAAVLQEWFSTQVSNDTGGNAAALFN 65
Query: 76 F---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
GA + F LG+ P I ASI++Q+L +VPSL +L KE G +KI Y + ++
Sbjct: 66 IFSGGALENCAVFSLGVMPYISASIMLQLLTAVVPSLGKLSKED-GGRQKIMQYTRYATI 124
Query: 133 GFAILEAVIVA-CYSLPYS---IYAASHSVKHV-------------MVTAFLLVCGAMTM 175
I + ++A + P + ++ ++K + ++T L G M +
Sbjct: 125 ALCIFQGYLLALTFENPANNPFLHGIMDTIKKMGIPLVSDPGIAFRVMTVLTLTAGTMFL 184
Query: 176 SWICDTISESGFGQGSSLIICVGILTGYTETL---YKMLSQLLGSSVRWWPFMLGLLGVF 232
W+ D I++ G G G S+II VGI+ L ++ G + P +L + F
Sbjct: 185 MWVGDQITDRGVGNGMSMIITVGIVARLPAGLMQAWRTFVPTAGKGAQVQPIVLVAMLAF 244
Query: 233 TIVTMWAVV-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTT 291
I+ + AV+ VT+ RK+ +QY K + T+ Y+P +N +G+ P++
Sbjct: 245 LIIVIAAVICVTQAQRKISVQYA--KRVVGQKVYGGQTQ---YMPLKVNYAGVMPIIFAQ 299
Query: 292 YLLAFPSILASIL--GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL- 348
LL FPS +AS SP Q++ L W++YT+YA +F F+ F +A
Sbjct: 300 ALLVFPSTIASTAFKTSPLAQNIAAALT-------HGWIHYTVYAAMIFFFSYFWVATQF 352
Query: 349 -PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR- 406
P++IA+ L K G +P V+PGK T ++L F G + L+I+A +L +
Sbjct: 353 QPQQIAEDLKKYGGYVPGVRPGKPTADFLDFTMTRLTFAGAIFLTIIAILPGMLSERMNV 412
Query: 407 -RINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
I F G TS+LIIVG I++ R + + + LR+
Sbjct: 413 PYITAQF-FGGTSLLIIVGVILDTMRQVETHLIQRHYDGFLRK 454
>gi|282899970|ref|ZP_06307931.1| SecY protein [Cylindrospermopsis raciborskii CS-505]
gi|281195240|gb|EFA70176.1| SecY protein [Cylindrospermopsis raciborskii CS-505]
Length = 437
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 137/440 (31%), Positives = 224/440 (50%), Gaps = 44/440 (10%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS---- 69
A E+F + + +R RL VT ++++ R+G F+P+PG +R + + +SG+
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGINR----ERFAEAISGNNAIF 64
Query: 70 --VDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSY 126
+D G L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 65 GLLDIFSGRGLS-TLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQI 123
Query: 127 IWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
++SLG+ IL++ A +L +A + V TA L G+M + W + I+E G
Sbjct: 124 TRYVSLGWGILQST--AFSALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERG 181
Query: 187 FGQGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G+SL+I V I+ ++L L Q+ G + +L L+ V TI+ + V V E
Sbjct: 182 IGNGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFVATIIGI--VFVQE 239
Query: 245 GCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
G R++ + SA R+ + E ++P +N G+ P++ +L+ P ++A+
Sbjct: 240 GIRRIPI-------ISARRQVGRRVLAEQRSFLPLRLNQGGVMPIIFAAAILSLPLLIAN 292
Query: 303 ILGSPFWQHVK--EILNPETS-VGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYL 356
F ++V+ I+N S G+ WVY +Y + F+ F I N P ++A L
Sbjct: 293 -----FTKNVELANIVNTYLSPSGSSSWVYALVYMVSIIFFSYFYSSLILN-PVDVAQNL 346
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
KMG+ IP ++PGKAT EY+ ++ F G + L ++A T ++ L + +G
Sbjct: 347 KKMGSSIPGIRPGKATSEYIERVSNRLTFLGAMFLGLVAIIPTAVESTL-NVPTFRGLGA 405
Query: 417 TSVLIIVGSIIELRRSYQAY 436
TS+LI+VG I+ R Q Y
Sbjct: 406 TSLLILVGVAIDTARQIQTY 425
>gi|434400523|ref|YP_007134527.1| protein translocase subunit secY/sec61 alpha [Stanieria
cyanosphaera PCC 7437]
gi|428271620|gb|AFZ37561.1| protein translocase subunit secY/sec61 alpha [Stanieria
cyanosphaera PCC 7437]
Length = 436
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 139/434 (32%), Positives = 220/434 (50%), Gaps = 32/434 (7%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF-VSGSVDE 72
A E+F + + +R RL VT L+++ R+G FIP+PG DR + V G +D
Sbjct: 8 TAQETFLQMAQAAGLRGRLLVTIGLLILVRLGIFIPVPGIDRAKFAAGIQNLPVLGFLDI 67
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 131
G L F LGI P I ASI+MQ+L +PSL L+K EG G KI +++
Sbjct: 68 FTGGGLS-ALGIFALGILPFINASIIMQLLTAAIPSLEDLQKNEGEAGRRKISQITRYVA 126
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
LG+AI++++ + L YA + + V+ T L G+M + W+ + I+E G G G+
Sbjct: 127 LGWAIIQSLGITIGLL--RPYATTPGIWFVVETVVALTAGSMFVMWVSELITERGIGNGA 184
Query: 192 SLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
SL+I V I+ +TL + + +Q G +L L+ + I+ + V V EG R++
Sbjct: 185 SLLIFVNIVAVLPKTLGQTIEFAQKGGREAVAQVVILLLVFLVMIIGI--VFVQEGTRRI 242
Query: 250 KLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
+ SA R+ E Y+P +N G+ P++ + +L PS LA +G
Sbjct: 243 PI-------ISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLILPSSLAGFVGGE 295
Query: 308 FWQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGAR 362
V +I+N + ++ +P W Y Y + F+ F I N P +++ L KMGA
Sbjct: 296 --GTVGQIVN-QIAIALQPGNWTYVAFYLLLIVFFSYFYASLIVN-PVDMSQNLKKMGAS 351
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++PGKAT YL K+ F G + L I+AT T+++ + +G TS+LI+
Sbjct: 352 IPGIRPGKATSTYLEKVLNRLTFLGAIFLGIVATVPTLVEGA-TGVTTFRGLGATSLLIL 410
Query: 423 VGSIIELRRSYQAY 436
VG I+ + Q Y
Sbjct: 411 VGVAIDTAKQIQTY 424
>gi|418322976|ref|ZP_12934277.1| preprotein translocase, SecY subunit [Staphylococcus pettenkoferi
VCU012]
gi|365230630|gb|EHM71716.1| preprotein translocase, SecY subunit [Staphylococcus pettenkoferi
VCU012]
Length = 430
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 216/425 (50%), Gaps = 25/425 (5%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 78
+FFK+ E+R ++F T ++VI +IG +IP+PG + Q S G D L FG A
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKIGTYIPVPGVNPNAFDQQQGS--QGVTDLLNTFGGGA 64
Query: 79 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGDVGRKKLTNVTRYFAVILAFV 124
Query: 138 EAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+++ +A Y A S+ ++ A +L G + W+ + I++ G G G S+II
Sbjct: 125 QSIGMAFQFNNYLKGALLIDQSIMSYLLIAVVLTTGTAFLMWLGEQITQFGVGNGISIII 184
Query: 196 CVGILTGYTETLYKMLSQ-LLGS---SVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
GIL+ ++ + Q +G+ S+ W ++GL+ ++T+ A+ V + RKV +
Sbjct: 185 FAGILSTLPSSINQFYQQAFVGAEDVSMAWLK-VIGLIVGLILLTIGAIYVLQALRKVPI 243
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 310
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRIGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPDADWAQ 297
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGK 370
V + NP ++G VY + F + + + P+++AD L K G+ +P ++PG+
Sbjct: 298 KVSSVANPSNNIGM--IVYIILIIAFTYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGE 353
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
T +Y+TK+ F G + L+++A IL L + + +G TS+LI++G IE
Sbjct: 354 QTKKYITKVLYRLTFVGSIFLAVVAILP-ILATKLMGLPQSIQVGGTSLLIVIGVAIETM 412
Query: 431 RSYQA 435
+S +A
Sbjct: 413 KSLEA 417
>gi|406881747|gb|EKD29730.1| hypothetical protein ACD_78C00300G0002 [uncultured bacterium (gcode
4)]
Length = 439
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 218/441 (49%), Gaps = 42/441 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRR--LIPQDYLSFVSGSVDE 72
+L NA+ + +++ ++ VT LI++ + IP+PG + L +D+L+ G
Sbjct: 2 ILKNASRIWKSKDVKSKIIVTLALIILYKFLSIIPIPGVNTEALLSIKDFLAANQGLAFF 61
Query: 73 LGDFGAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
G L+ S +G++P I A I+MQ+L ++P L L+KEG G +KI +Y WI+
Sbjct: 62 SSLMGGGLEHFSIVLMGLAPYINAVIIMQLLAVVIPQLESLKKEGEQGQKKINNYTRWIT 121
Query: 132 --LGFAILEAVIVACYSL---PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
L FA +I+ +L I S+ V+ + G M + W+ + I+ESG
Sbjct: 122 VPLAFAQSYGMIILLNTLIGGGGKIMDTSNFWGAVLPAMLFITAGTMFLMWLGEVINESG 181
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEG 245
G GSS+II G+L+G + + +S +G+ +L LL V T+ ++ ++ TEG
Sbjct: 182 IGNGSSMIIFAGVLSGIPSHIMQYIS--VGNYT-----LLALLTVMTLGVVYIIIKFTEG 234
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL- 304
RK+ L Y R++ + Y P +N +GM P++ ++ FP+++ IL
Sbjct: 235 YRKIPLIY-----TRTGRDE------KSYFPIRVNQAGMIPIIFAVSIVTFPALIGQILS 283
Query: 305 --GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMG 360
GS + + L S+ W+Y IY V F+ F I+ + +E+A+ + K G
Sbjct: 284 NRGSGRSVQIGQFLLEYFSMNNPSWLYIAIYFLLVLGFSFFYISIVFNTEEVAESIQKRG 343
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILA----------TSSTILDHYLRRINE 410
IP V+PG+ T EYL K F+GG L+I+A + +LD N
Sbjct: 344 GYIPGVRPGRETAEYLEKTSMHLNFYGGSFLAIIAVFPYLMSKLNAVTGLLDTSGSGGNI 403
Query: 411 GFSIGFTSVLIIVGSIIELRR 431
F I ++I+VG ++EL R
Sbjct: 404 DFLISGAGLIIVVGVVLELIR 424
>gi|374308531|ref|YP_005054962.1| preprotein translocase subunit SecY [Filifactor alocis ATCC 35896]
gi|291166859|gb|EFE28905.1| preprotein translocase, SecY subunit [Filifactor alocis ATCC 35896]
Length = 423
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 211/419 (50%), Gaps = 24/419 (5%)
Query: 28 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQL 87
+R+R+ TA+++V+ RIG IP G D LI S+ ++ GA + + F L
Sbjct: 14 LRKRILFTAMMLVVFRIGASIPTAGMDTSLIKNQLSKSNVLSLYDMMSGGALSQFTLFAL 73
Query: 88 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 147
G++P I +SI+MQ+L +PSL +L+K G DG +KI Y ++S+ A+ ++ +SL
Sbjct: 74 GVTPYITSSIVMQLLTVAIPSLEELQKSGEDGRKKISEYTRYLSVALALFQS-----FSL 128
Query: 148 PYSIYAA---SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 204
Y ++ S + V L G + W+ + ++E G G G S+II GI++ Y
Sbjct: 129 VYGMFRGALLSQDLLPVFTIVITLTAGTTFLMWLGEIVTEKGIGNGVSMIIYAGIISRYP 188
Query: 205 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFKLASAAR 263
++ + L L + P + + V +I + V+ V EG RK+ +QY A
Sbjct: 189 ISVKQTLE--LSKTGAINPIQIIVFLVVSIAIIIGVIMVLEGVRKIPVQY-----AKRVI 241
Query: 264 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH-VKEILNPETSV 322
+ +IP +N +G+ PV+ + ++ P ++ + + +Q+ V++ L+ +
Sbjct: 242 GKNTYGGQSSHIPLKVNQAGVIPVIFASSVMMLPEMMRFFVRNQEYQNFVQKYLSSNGNP 301
Query: 323 GARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQ 380
G +++ I VF F+ F I P E+AD L IP ++PGK T +Y+ K
Sbjct: 302 GI--YIFSIIQFVLVFAFSYFYISITFQPDEVADNLKNGNGFIPGIRPGKPTADYIAKSL 359
Query: 381 ASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
F G + LS++A T++ H I F G TS+LI+VG IE R +A +VM
Sbjct: 360 NRLTFVGAVFLSLIAALPTVIYH-ATEIPVRF--GGTSLLIVVGVAIETMRQIKAQSVM 415
>gi|310821014|ref|YP_003953372.1| preprotein translocase subunitSecY [Stigmatella aurantiaca DW4/3-1]
gi|309394086|gb|ADO71545.1| Preprotein translocase, SecY subunit [Stigmatella aurantiaca
DW4/3-1]
Length = 448
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 211/448 (47%), Gaps = 54/448 (12%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDEL 73
LN A F +E+R RL T VL+ + RIG FI PG DR + D G V
Sbjct: 3 LNAFANVFRIAELRSRLAYTLVLLAVYRIGIFINTPGVDRAAMNAFMDAQKQSGGLVSLF 62
Query: 74 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
F GA ++S F LGI P + ASI+MQ+L +VPSL +L+KEG G +KI Y + S
Sbjct: 63 NLFSGGALEQMSIFGLGIMPYVSASIIMQLLAVVVPSLERLQKEGASGRQKINQYTRYGS 122
Query: 132 LGFAILEAVIVACY--SLPYS---------IYAASHSVKHVMVTAFLLVCGAMTMSWICD 180
+ ++++ + ++ + SL S I S +T L G + W+ +
Sbjct: 123 IVLSVVQGIGISRWLASLGRSDAGQSGFNQIVVPDDSAWFTFMTVISLTAGTAFIMWLGE 182
Query: 181 TISESGFGQGSSLIICVGILTGY---TETLYKMLSQ-------LLGSSVRWWPFMLGLLG 230
I+E G G G SLII GI+ G +TL M +Q L+G +V FML ++
Sbjct: 183 RITERGIGNGISLIIFAGIVAGLLPNGKTLLDMTAQGAIEAAALVGLAV----FMLFIIA 238
Query: 231 VFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTT 290
V V V G R++ +QY A Y P +N SG+ P +
Sbjct: 239 V-------VVYVERGMRRIPVQY-----AKRMAGRRMFAGQATYFPMKVNTSGVIPPIFA 286
Query: 291 TYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL-- 348
LL+FP+ L + PF Q ++ L PW+Y ++ V F F A
Sbjct: 287 GALLSFPATLGTWF--PFLQTFRQGLE------GNPWLYNGLFVLLVIFFAYFYTALTFR 338
Query: 349 PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI 408
P ++AD + K G IP ++PG+ T +++ ++ F G + L+ + TIL +L+
Sbjct: 339 PDDVADNIKKQGGYIPGIRPGRQTADFIERVLNRITFGGAIYLATICVIPTILTQWLQ-- 396
Query: 409 NEGFSIGFTSVLIIVGSIIELRRSYQAY 436
F+ G T++LI+VG ++ + + +
Sbjct: 397 -VPFAFGGTALLIVVGVALDTVQQIEGH 423
>gi|11465763|ref|NP_053907.1| preprotein translocase subunit SecY [Porphyra purpurea]
gi|1711367|sp|P51297.1|SECY_PORPU RecName: Full=Protein translocase subunit SecY
gi|1276763|gb|AAC08183.1| Preprotein translocase subunit (chloroplast) [Porphyra purpurea]
Length = 411
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 221/422 (52%), Gaps = 35/422 (8%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS-VDELGDF--GAELK 81
KS++R R+ T +L+V++R+G FIP+PG D Y S + V+ L F G
Sbjct: 4 KSDLRNRIKFTLLLLVLARLGIFIPVPGIDHDAF---YASVEKNTLVNFLNIFSGGGFST 60
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILEAV 140
+ F LGI P I +SI+MQ+L I+P L +L+KE G G +KI +++LG+A L++
Sbjct: 61 IGIFALGIVPYINSSIVMQLLTKIIPDLEKLQKEEGELGRQKITQITRYLALGWATLQSG 120
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
++ + PY + + V + L G+M + W+ + I+E G G G+SL+I I+
Sbjct: 121 AISIWVKPY---VFNWNFTFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLIFQNIV 177
Query: 201 TG----YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
+G +T++ + + +S+++ F++ +F ++ + + V EG R++K+
Sbjct: 178 SGLPKNFTQSFFD--ANYSNTSIKFGLFIV----IFLLMIIITIFVQEGTRRIKI----- 226
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
+++ S I + Y+P +N G+ P++ + +A P+ L + + F V +
Sbjct: 227 -ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPAYLTQLTQNTFLLQVLYLF 285
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIE 374
P S+ Y +Y+ + F+ F I P++IA L KMGA IPN++PG+ATI+
Sbjct: 286 CPNGSL------YLVLYSVLILFFSYFYTSIVMNPEDIATNLKKMGASIPNIRPGQATID 339
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
YL I F G L +A I++ + +I +G TS+LI+VG I+ + Q
Sbjct: 340 YLQVILNRLTFLGATFLFTVALIPFIIEK-VAQIQNLRGLGATSLLILVGVAIDTAKQIQ 398
Query: 435 AY 436
Y
Sbjct: 399 TY 400
>gi|404416705|ref|ZP_10998520.1| preprotein translocase subunit SecY [Staphylococcus arlettae
CVD059]
gi|403490909|gb|EJY96439.1| preprotein translocase subunit SecY [Staphylococcus arlettae
CVD059]
Length = 430
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 215/427 (50%), Gaps = 29/427 (6%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 78
SFFK+ E+R ++F T ++VI +IG +IP PG + S G D L FG A
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDSQQGS--QGVTDLLNTFGGGA 64
Query: 79 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
S F +GI P I ASI+MQ+L IVP + K+G G +K+ ++ + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEAGRKKLNNFTRYFAIILAFV 124
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMT-----MSWICDTISESGFGQGSS 192
+++ +A ++ Y + +T++LL+ +T + W+ + I++ G G G S
Sbjct: 125 QSIGMA---FQFNNYLKGQLIMDQSITSYLLIAVVLTAGTAFLIWLGEQITQFGVGNGIS 181
Query: 193 LIICVGILTGYTETLYKMLSQ-LLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
+II GIL+ +L + Q +G W ++GLL ++T+ A+ V + RK+
Sbjct: 182 IIIFAGILSTLPSSLIQFYQQAFVGQDDVTMAWLKVIGLLVGMVLLTVGAIFVLQAVRKI 241
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 309
+QY K +A R S T Y+P +N +G+ PV+ P L W
Sbjct: 242 PIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPDADW 295
Query: 310 -QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKP 368
Q V ++ NP ++G VY + F + + + P+++A+ L K G+ +P ++P
Sbjct: 296 AQKVSDVANPSNNIGM--IVYVVLIIAFTYFYAFVQVN--PEKMAENLKKQGSYVPGIRP 351
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G+ T +Y+T++ F G + L+++A I + + + +G TS+LI++G IE
Sbjct: 352 GEQTKKYITRVLYRLTFVGSIFLAVIAILPIIATKVM-SLPQSIQVGGTSLLIVIGVAIE 410
Query: 429 LRRSYQA 435
+S +A
Sbjct: 411 TMKSLEA 417
>gi|336322771|ref|YP_004602738.1| preprotein translocase subunit SecY [Flexistipes sinusarabici DSM
4947]
gi|336106352|gb|AEI14170.1| preprotein translocase, SecY subunit [Flexistipes sinusarabici DSM
4947]
Length = 438
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 217/433 (50%), Gaps = 27/433 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E+RRR+ T L+++ RIG +P PG + + Q + + SG++ + D GA +L+
Sbjct: 13 ELRRRILFTLALLIVYRIGTHVPTPGINSDAL-QQFFAQQSGNILGMVDMFTGGALSRLT 71
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q+L +VP L +L+K+G +G EKI Y + ++G + ++ + +A
Sbjct: 72 VFGLGIMPYISASIIIQLLTVVVPHLAELKKQGSEGQEKITKYTRYGTVGISAVQGLGIA 131
Query: 144 CYSLPYSIYAASHSV-----KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+ + V +VTA L G + + W+ + I+E G G G SLII G
Sbjct: 132 IGLEAMNSPTGTAVVMFPGWGFRLVTALTLTTGTVFLMWLGERITEKGIGNGISLIIFAG 191
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ + + + ++ ++ +L + VT V V R++ +QY +
Sbjct: 192 IVARFPAAVANTFRMMQTGELQIITLIV-VLAIILGVTAAIVYVEISSRRLPIQY--VRK 248
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
A A ++ Y+P +NP+ + P++ +++FPS L++ + + + +P
Sbjct: 249 AGAGTRGGNVS--NSYLPLKLNPANVIPIIFAASIMSFPSTLSTFSQNSIFSQIGVWFSP 306
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
+ VYY +Y + F F I P ++AD + K G IP +PGKAT +++
Sbjct: 307 SSP------VYYILYVVLIVFFTYFYTSIIFNPDDVADNIQKSGGVIPGKRPGKATSDFI 360
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRR-INEGFSIGFTSVLIIVGSIIELRRSYQA 435
+ + F G L LS+LA IL ++ N F G TS+LI++G ++L + ++
Sbjct: 361 DYVLSRLTFIGALYLSVLA----ILPQFIISWFNVPFYFGGTSLLIVIGVGLDLIQRIES 416
Query: 436 YNVMPSLSKALRR 448
+ + + L+R
Sbjct: 417 HLITHNYDGFLKR 429
>gi|427718738|ref|YP_007066732.1| protein translocase subunit SecY [Calothrix sp. PCC 7507]
gi|427351174|gb|AFY33898.1| protein translocase subunit secY/sec61 alpha [Calothrix sp. PCC
7507]
Length = 437
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 221/437 (50%), Gaps = 38/437 (8%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL VT ++++ R+G F+P+PG +R + +SG+
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGINR----DRFHEAISGNNSIF 64
Query: 74 GDF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 127
G G L L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 65 GLLDIFSGRGLSTLGVFALGILPFINASIIIQLLTAALPSLENLQKNEGEAGRRKISQIT 124
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
++++G+AI+++ A +L +A V TA L G+M + W + ++E G
Sbjct: 125 RYVTVGWAIIQST--AFSALFLQQFALEPGPIFVAETAIALTAGSMFVMWASELVTERGI 182
Query: 188 GQGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G+SL+I V I+ ++L L Q+ G + +L L+ +FTIV + V V EG
Sbjct: 183 GNGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFLFTIVGI--VFVQEG 240
Query: 246 CRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
R++ + SA R+ + E Y+P +N G+ P++ +L+ P ++A+
Sbjct: 241 IRRIPI-------ISARRQVGRRVLAEQRSYLPLRLNAGGVMPIIFAAAILSLPLLIANF 293
Query: 304 LGSPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKM 359
+P + V L+P G++ W Y +Y + F+ F I N P ++A L KM
Sbjct: 294 TKNPELANIVNNYLSPG---GSQAWAYALVYLISIVFFSYFYSSLIVN-PVDVAQNLKKM 349
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G+ IP ++PGKAT EY+ ++ F G + L +A T ++ L + +G TS+
Sbjct: 350 GSSIPGIRPGKATSEYIERVINRLTFLGAIFLGFVAIIPTAVESAL-GVPTFKGLGATSL 408
Query: 420 LIIVGSIIELRRSYQAY 436
LI+VG IE + Q Y
Sbjct: 409 LILVGVAIETAKQVQTY 425
>gi|150015063|ref|YP_001307317.1| preprotein translocase subunit SecY [Clostridium beijerinckii NCIMB
8052]
gi|149901528|gb|ABR32361.1| preprotein translocase, SecY subunit [Clostridium beijerinckii
NCIMB 8052]
Length = 432
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 225/445 (50%), Gaps = 41/445 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L + +F E+R+++ T +L+ + R+G IPLPG I D+L +S S LG
Sbjct: 1 MLQTLSNAFKVPELRKKILWTVLLVAVFRMGSHIPLPG-----INSDFLKNLSQSGGLLG 55
Query: 75 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
+ GA + S LG+ P I ASI++Q+L +P L QL KEG G +KI++ +
Sbjct: 56 FYDMLSGGAFSRSSILALGVMPYINASIIIQLLTVAIPQLEQLSKEGDTGRKKIQNATRY 115
Query: 130 ISLGFAILEAVIVACYSLPYSIYAA-SHSVKHVMVTA-------FLLVCGAMTMSWICDT 181
+SLG A + L Y I+A S S V +TA F LV G W+ D
Sbjct: 116 VSLGIAFI---------LAYGIFATISSSGATVGLTAIQKTIVVFALVVGTTFCMWLGDQ 166
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLS-QLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
++ G G G+S++I V I++ T+ M++ Q GS+ + G+ VF + T+
Sbjct: 167 LTVKGIGNGTSILIFVNIISRVPATIASMMTLQQAGSASIVEIVLFGVFTVFLLATILYF 226
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
++E R++ +QY G K AS + + +IP +I S + ++ + ++ FP +
Sbjct: 227 SLSE--RRIPVQYAG-KFASG--NSNMVKSQSTHIPLSIIGSAVLAIIFSMSVMDFPKTI 281
Query: 301 ASI---LGSPFWQHVKEILNPETSV-GARPWVYYTIYAFFVFLFNIF--DIANLPKEIAD 354
A++ +G + K +LN TS+ + W+Y +YA FN F I P E+++
Sbjct: 282 ATLFGGVGESQKEWAKWVLNNPTSIFNNKSWMYMVLYAVLTIFFNWFYTQITFKPDEMSE 341
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 414
L+K +P V+PG+ T Y ++ F GG+L ++LA + ++ +Y + N FS
Sbjct: 342 NLHKSAGFVPGVRPGEETTTYFERVLNRLSFIGGILAAVLAVTPVMIQNYTQFQNIAFS- 400
Query: 415 GFTSVLIIVGSIIELRRSYQAYNVM 439
T +LI++ ++ R ++ V+
Sbjct: 401 -GTGLLIVINVALDFTRKVESQMVV 424
>gi|318042546|ref|ZP_07974502.1| preprotein translocase subunit SecY [Synechococcus sp. CB0101]
Length = 438
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 212/424 (50%), Gaps = 38/424 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS-----------FVSGSVDELGD 75
++R R+ +T L+++ R+G +IP+PG DR QD+++ F G + LG
Sbjct: 23 DLRNRVLITLGLLLLVRLGIYIPVPGIDRAAF-QDFIARGGQLIGFLDIFTGGGISTLGV 81
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGF 134
FG LGI P I ASI++Q+L +P L L+K EG G KI Y +++LG+
Sbjct: 82 FG---------LGILPFINASIILQLLTSALPQLEDLQKNEGEAGRRKIAQYTRYVALGW 132
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
IL++V+ A PY+ S V V+ TA LV G+M + WI + I+E G GQG+SL+
Sbjct: 133 GILQSVVFALILRPYATAGTSELV-FVLQTAVALVTGSMVVMWISEVITERGIGQGASLV 191
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY 254
I + I+ L + ++ L+ VF I + V V EG R++
Sbjct: 192 IYLNIVATLPRALGSTIELAQSGDRSTVGGIVVLVAVFLITIVGIVCVEEGSRRI----- 246
Query: 255 GFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
+ SA R+ + ++ + Y+P +N G+ P++ + ++ P +A+I P+ ++
Sbjct: 247 --PIVSAKRQVGGATLSARQSYLPLKLNAGGVMPIIFASAVVFLPLTIANITKQPWLINI 304
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGK 370
L+P + PW+Y ++ + F+ F + P ++A L + G IP V+PG
Sbjct: 305 AAALSPNSGT---PWLYALLFFGLIIGFSFFYATLTINPVDVATNLKRSGVAIPGVRPGS 361
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
AT YL+ +Q G L L +A + ++ ++ +G TS+LI+VG I+
Sbjct: 362 ATAGYLSGVQNRLTLLGALFLGAVAIIPSAVESA-TQVKTFQGLGATSLLILVGVAIQTA 420
Query: 431 RSYQ 434
+ Q
Sbjct: 421 KQLQ 424
>gi|358051316|ref|ZP_09145526.1| preprotein translocase subunit SecY [Staphylococcus simiae CCM
7213]
gi|357259136|gb|EHJ08983.1| preprotein translocase subunit SecY [Staphylococcus simiae CCM
7213]
Length = 430
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
SFFK+ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLTNITRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 ILAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + S +G +S+ W +LGL+ ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQSAFVGQEDTSLAWLK-VLGLIVSLILLTIGAIYVLEAK 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP +++G +Y + F + + + P+++AD L K G+ +P
Sbjct: 293 AEWAQNIANTANPSSNIGM--VIYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>gi|427736163|ref|YP_007055707.1| protein translocase subunit SecY [Rivularia sp. PCC 7116]
gi|427371204|gb|AFY55160.1| protein translocase subunit secY/sec61 alpha [Rivularia sp. PCC
7116]
Length = 437
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 139/434 (32%), Positives = 220/434 (50%), Gaps = 32/434 (7%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RLFVT ++++ R+G +IP+PG DR +S +G L
Sbjct: 9 TAQETFMQMAQAAGLRGRLFVTIGILLLIRLGIYIPIPGIDRVRF-SAAMSQGNGLAGIL 67
Query: 74 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 130
F G L F LGI P I ASI++Q+L +PSL +L+K EG G KI ++
Sbjct: 68 DIFSGGGFSALGVFTLGILPFINASIIIQLLTAAIPSLEKLQKDEGEAGRRKISQITRYV 127
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
+LG+AI++++ ++ L +A V TA LV G+M + W + I+E G G G
Sbjct: 128 ALGWAIVQSIFISSVWLKN--FALDFGPIFVFETALALVAGSMFVMWASEVITERGIGNG 185
Query: 191 SSLIICVGILTGYTETLYKMLS--QLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
+SL+I + I++ TL +S Q+ G +L LL + TI+ + V V EG R+
Sbjct: 186 ASLLIFLNIVSSLPTTLGSTISFAQVGGREAVGQVVVLLLLFLATIIGI--VFVQEGMRR 243
Query: 249 VKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-G 305
+ + SA R+ + E ++P +N G+ P++ T +L+ P ++ +
Sbjct: 244 IPI-------ISARRQVGRRVLAEQRSFLPLRLNQGGVMPIIFATAILSLPLLIGNFTQN 296
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIADYLNKMGAR 362
LNP G+ W Y IY F + F+ F I N P +IA L KMG+
Sbjct: 297 QQIANFTSTYLNPG---GSGWWAYALIYLFSIIFFSYFYSSLIVN-PVDIAQNLKKMGSS 352
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++PGKAT EYL ++ F G L ++A T+++ L + +G TS+LI+
Sbjct: 353 IPGIRPGKATSEYLERVLNRLTFLGAGFLGLVAIIPTVVERVL-NVPTFRGLGATSLLIL 411
Query: 423 VGSIIELRRSYQAY 436
VG I+ + Q Y
Sbjct: 412 VGVAIDTAKQIQTY 425
>gi|291286331|ref|YP_003503147.1| preprotein translocase subunit SecY [Denitrovibrio acetiphilus DSM
12809]
gi|290883491|gb|ADD67191.1| preprotein translocase, SecY subunit [Denitrovibrio acetiphilus DSM
12809]
Length = 436
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 215/446 (48%), Gaps = 31/446 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+ E F E+RRR+ T + + RIG +P PG D + Q F S + LG
Sbjct: 1 MFKKVEEIFSIPELRRRILWTLFFLFVYRIGAHVPTPGIDGEALSQ---FFAQQSGNLLG 57
Query: 75 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
F GA KL+ F LGI P I A+I+++++ VP L +L+K G +G +KI Y +
Sbjct: 58 FFDMFTGGALSKLTVFGLGIMPYISAAIILELMTVAVPHLAELKKRGQEGRDKITRYTRY 117
Query: 130 ISLGFAILEAVIVACYSLPYSIYAASHSV-----KHVMVTAFLLVCGAMTMSWICDTISE 184
++ ++++ + +A + S V +VTA L G + + W+ + ISE
Sbjct: 118 GTVAISLVQGMGIAIGLEGMTSPGGSPVVMFPGTGFRIVTAITLTTGTVFLMWLGEKISE 177
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G G S+II GI+ G+ + + L+ + V+ ++ +L + VT V +
Sbjct: 178 KGLGNGISVIIFAGIIAGFPSAVSRTLTLVQTGEVQLIT-IIAVLAIILAVTAAIVFMET 236
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
R++ +QY + + + + Y+P +NP+G+ P++ +LAFPS LAS
Sbjct: 237 SSRRLPIQYV--RKGGGGKGNVATS----YLPLKLNPAGVIPIIFAMSILAFPSTLASFS 290
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGAR 362
+ Q + L+P + WVYY + F+ F F I P +IA+ +NK G
Sbjct: 291 ENLLVQKISFFLSPSS------WVYYAVTLGFIIFFTYFYTSIIFNPDDIAENINKSGGV 344
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP +PG T +++ + F G L L +A ++ +R N F G TS+LI+
Sbjct: 345 IPGKRPGVETAKFIDFTLSRLTFVGALYLGAVAILPQLI---IRGFNVPFYFGGTSILIV 401
Query: 423 VGSIIELRRSYQAYNVMPSLSKALRR 448
+G +++ +A+ V + L++
Sbjct: 402 IGVGMDVISKIEAHLVTHNYDGFLKK 427
>gi|428777699|ref|YP_007169486.1| protein translocase subunit SecY [Halothece sp. PCC 7418]
gi|428691978|gb|AFZ45272.1| protein translocase subunit secY/sec61 alpha [Halothece sp. PCC
7418]
Length = 450
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 212/452 (46%), Gaps = 58/452 (12%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 65
NA E+F + + +R RL +T LI++ R+G IP+PG DR + +L+F
Sbjct: 10 NAQETFMQMAQAAGLRSRLLITVGLILLVRLGVRIPVPGIDRASFAEAVQNSPISGFLNF 69
Query: 66 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 124
+SG G + F LGI P I ASI+MQ+L +P L L+K EG G KI
Sbjct: 70 LSG--------GGLSAVGIFALGILPFINASIIMQLLTAGLPYLENLQKNEGEAGRRKIS 121
Query: 125 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+++L A+ + +A + PY A + ++ T L G+M + W+ + I+E
Sbjct: 122 QITRYVALASAVFNSFGLASFVQPY---AYNPGPIFLLKTVIALTAGSMFVIWLSELITE 178
Query: 185 SGFGQGSSLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 242
G G G SL+I V I+ TL + +Q G +L L VF ++ + V V
Sbjct: 179 RGIGNGPSLLIFVNIVAVLPRTLGNTIEFAQTGGREAVAQVLILAL--VFLVMIVGIVFV 236
Query: 243 TEGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
EG R++ + SA R+ E Y+P +N G+ P++ + LL PS L
Sbjct: 237 QEGTRRIPI-------VSARRQVGRRLYRERTSYLPLRVNQGGVLPIIFASTLLILPSSL 289
Query: 301 ASILG---------------SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDI 345
A + + +NP G PW+Y TIY + F+ F
Sbjct: 290 AQFTQGGGGEEEAAGIGATINDILVQISTYMNPS---GPTPWLYVTIYLLLILFFSYFYA 346
Query: 346 ANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDH 403
A + P +++ L KMGA IP ++PGKAT +YL K+ G + L I+AT T ++
Sbjct: 347 ALVVNPVDMSQNLKKMGASIPGIRPGKATSDYLQKVINRLTLLGAIFLGIVATVPTAVET 406
Query: 404 YLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
+ +G TS+LI+VG I+ + Q+
Sbjct: 407 A-TGVTTFQGLGATSLLILVGVAIDTAKQIQS 437
>gi|384253976|gb|EIE27450.1| SecY protein [Coccomyxa subellipsoidea C-169]
Length = 485
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 212/444 (47%), Gaps = 38/444 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVS--GSVDELGDFGAE- 79
++ +R+ +T + + ++R+G FIPLPG + ++ S + G +E FGA+
Sbjct: 31 QLLQRIALTVLFLALARVGQFIPLPGVNLAAVASAAAGEHCSALGTGGGFEE--AFGADS 88
Query: 80 LKLSFFQLGISPQIVAS------ILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
+ FQLGI P I AS +L+++ I L QLR+ G +G IK Y SL
Sbjct: 89 ASVGIFQLGIGPYIDASWTLSLILLLKIPQEIYVHLQQLRRAGREGAAVIKMYTQVGSLL 148
Query: 134 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
FA++ A P++I A + H M T LV GAM + ++CD + G G G SL
Sbjct: 149 FAVVLGAKRAVELRPHAIAPAGF-LTHTMAT---LVAGAMLLRFVCDQNEDHGLGDGISL 204
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
+IC G+ GY L ++ L ++V W + + AV VT+ +++ L Y
Sbjct: 205 LICAGMAAGYAAKLRQLPGLLAAAAVPAWKLGAAVSACLALAYA-AVYVTQIEKRLPLVY 263
Query: 254 YGFKLASAAREDSPIT------EVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
Y + + +P Y+P I PSGM P+L +++ + + + P
Sbjct: 264 YKRRTEELGKRRAPSQLPAKPPRTTDYLPLRIAPSGMGPLLMASFVFYMSPQVVAFVSPP 323
Query: 308 FWQHVKEIL-NPETSVGARPWVYYTIYAFFVFLFNIFDIAN--LPKEIADYLNKMGARIP 364
+ L NP PW + FVF+ I D ++ +E+A+++ + A +
Sbjct: 324 AAARMAAFLFNPAV----LPWS----FGLFVFMTMILDFSSGTAAREMAEWMASVDAGVK 375
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
V PG T ++L + Q RFWGGL ++ LA ++ + D R + G S+ S+++I G
Sbjct: 376 GVSPGPFTEDFLVQQQGLMRFWGGLAIAGLAVAANLFDAACTR-HLGASLNAISLIMITG 434
Query: 425 SIIELRRSYQAYNVMPSLSKALRR 448
+ R Q+ +P L++AL R
Sbjct: 435 FVTTALRQAQSLMQLPRLARALAR 458
>gi|373455322|ref|ZP_09547158.1| preprotein translocase, SecY subunit [Dialister succinatiphilus YIT
11850]
gi|371934962|gb|EHO62735.1| preprotein translocase, SecY subunit [Dialister succinatiphilus YIT
11850]
Length = 420
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 211/428 (49%), Gaps = 31/428 (7%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
A F E++ R+ T ++ VI R+G IP+PG D +I F SG++ D
Sbjct: 6 ANFFANKELKDRILFTFLMFVIFRLGVHIPVPGVDSSVIES---LFTSGNLFGFLDLFAG 62
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA K S F + I+P I +SI+MQ+L ++P+L + RK+G +G+++I+ + ++ A
Sbjct: 63 GALSKFSIFAMSITPYINSSIIMQLLTAVIPTLEEWRKDGAEGYKRIQKVTRYFTIFLAA 122
Query: 137 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++A Y+L + +S + +L G + WI D I+E G G G SLII
Sbjct: 123 VQA-FGMTYALRINNALVDNSWLYFFFVIVVLTAGTCLLMWIGDKITEHGIGNGISLIIF 181
Query: 197 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYG 255
GI+ + + + ++ L ++ PF L L V + + V+ V EG R++ +QY
Sbjct: 182 CGIVARFPQAISTVVDYLKVGTIS--PFQLLLFLVIALAMILMVIEVNEGQRRIPIQY-- 237
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 315
A Y+P +N +G+ P++ + +L P LA + HV +
Sbjct: 238 ---AKRVIGRRMYGGHSTYLPLKVNQAGVIPIIFASSILMLPITLAQFI------HVSWV 288
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKMGARIPNVKPGKAT 372
+ G W Y F +F+F F A N+ K++AD + K G IP ++PG+ T
Sbjct: 289 QSIGNFFGWGTWPNTICYGFLIFIFTYFYTAISVNI-KDLADNMKKYGGFIPGIRPGQPT 347
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSVLIIVGSIIELR 430
+ Y+ K+ + G + L+ +A IL +++ I +G G TS+LIIVG ++
Sbjct: 348 MMYVDKVLSRITLTGAVFLAFIA----ILPNFIGNITGIQGVYFGGTSLLIIVGVALDTM 403
Query: 431 RSYQAYNV 438
R Q+Y V
Sbjct: 404 RQAQSYMV 411
>gi|70725823|ref|YP_252737.1| preprotein translocase subunit SecY [Staphylococcus haemolyticus
JCSC1435]
gi|68446547|dbj|BAE04131.1| preprotein translocase SecY subunit [Staphylococcus haemolyticus
JCSC1435]
Length = 430
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 212/427 (49%), Gaps = 29/427 (6%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 78
SFFK+ E+R ++F T ++VI +IG +IP PG + P + G L FG A
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPE--PFEQQGSDQGVAALLNTFGGGA 64
Query: 79 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
S F +GI P I ASI+MQ+L IVP + K+G G K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGEVGKRKLSNVTRYFAIILAFI 124
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMT-----MSWICDTISESGFGQGSS 192
+++ +A ++ Y + H + ++LL+ +T + W+ D I++ G G G S
Sbjct: 125 QSIGMA---FQFNNYLGGKLIIHQSIMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGIS 181
Query: 193 LIICVGILTGYTETLYKMLSQLL---GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
+II GIL+ ++ + + Q + W ++GL+ ++T+ A+ V E RK+
Sbjct: 182 IIIFAGILSTLPSSIIQFVQQAFVGNDDTTLAWLKVIGLIVGLVLLTIGAIYVLEAKRKI 241
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 309
+QY K SA R S T Y+P +N +G+ PV+ P L W
Sbjct: 242 PIQYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKADW 295
Query: 310 -QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKP 368
Q + E NP + G VY + F + + + P+++AD L K G+ +P ++P
Sbjct: 296 AQTISEYANPSNTYGM--IVYVVLIIAFTYFYAFVQVN--PEKMADNLKKQGSYVPGIRP 351
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G+ T +Y+TK+ F G + L+++A + ++ + + IG TS+LI++G IE
Sbjct: 352 GEQTKKYITKVLYRLTFVGSIFLAVIAILPILATKFM-SLPQSIQIGGTSLLIVIGVAIE 410
Query: 429 LRRSYQA 435
+S +A
Sbjct: 411 TMKSLEA 417
>gi|428305853|ref|YP_007142678.1| protein translocase subunit SecY [Crinalium epipsammum PCC 9333]
gi|428247388|gb|AFZ13168.1| protein translocase subunit secY/sec61 alpha [Crinalium epipsammum
PCC 9333]
Length = 447
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 213/437 (48%), Gaps = 29/437 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL-SFVSGSVDE 72
A E+F + + +R RL VT L+++ R+G IP+PG DR QD S V G +D
Sbjct: 10 TAQETFMQMAQAAGLRGRLLVTIGLLILVRLGVHIPIPGIDRARFAQDIQNSPVIGFLDI 69
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 131
G + F LGI P I ASI++Q+L +P L L+K EG G KI +S
Sbjct: 70 FSGGGIS-AVGIFALGILPYINASIILQLLTAALPYLENLQKNEGEAGRRKISQITRIVS 128
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
L +A+++++ ++ + Y+ S + V TA L G+M + W+ + ++E G G G+
Sbjct: 129 LVWALVQSIGISLWVQRYA--TGSGGLIFVAQTALALTAGSMFVMWVSELVTERGIGNGA 186
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SL+I + I++ +L + L ++ LL VF ++ + V V EG R++ +
Sbjct: 187 SLLIFINIVSVLPRSLGQTLELAQTGDREILGRVIILLLVFLVMIVGIVFVQEGTRRIPI 246
Query: 252 QYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL----G 305
SA R+ E Y+P +N G+ P++ + +L P+ LA
Sbjct: 247 -------ISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLVLPASLAQFTQNSAN 299
Query: 306 SPFWQHVKEILNPETS----VGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKM 359
+PF + + N + G PW+Y Y F + F+ F + + P +++ L KM
Sbjct: 300 NPFLGGLHQFFNQAANYLSPTGQTPWLYVAFYVFLIVFFSYFYASLIINPVDMSQNLKKM 359
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
GA IP V+PG T +Y+ ++ G + L ++A T ++ + + +G TS+
Sbjct: 360 GASIPGVRPGTTTSDYIERVLNRLTLLGAIFLGLVAIVPTAVESTI-GVTTFKGLGATSL 418
Query: 420 LIIVGSIIELRRSYQAY 436
LIIVG I+ + Q Y
Sbjct: 419 LIIVGVAIDTAKQIQTY 435
>gi|17231689|ref|NP_488237.1| preprotein translocase subunit SecY [Nostoc sp. PCC 7120]
gi|17133332|dbj|BAB75896.1| preprotein translocase SecY subunit [Nostoc sp. PCC 7120]
Length = 437
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 136/434 (31%), Positives = 219/434 (50%), Gaps = 32/434 (7%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVD 71
A E+F + + +R RL VT ++++ R+G F+P+PG DR + S + G +D
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGIDRTRFAEAISSNNAIFGLLD 68
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 130
G L F LGI P I ASI++Q+L +PSL L+K EG G KI ++
Sbjct: 69 IFSGRGLS-TLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITRYV 127
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
++G+AI ++V A +L +A V TA L G+M + W + I+E G G G
Sbjct: 128 TVGWAIFQSV--AFSALFLQQFALQPGPVFVAETAIALTAGSMFVMWASELITERGIGNG 185
Query: 191 SSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
+SL+I V I+ ++L L Q+ G + +L L+ + TIV + V V EG R+
Sbjct: 186 ASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFLATIVGI--VFVQEGIRR 243
Query: 249 VKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
+ + SA R+ + E Y+P + G+ P++ +L+ P ++A+ +
Sbjct: 244 IPI-------ISARRQVGRRVLAEQRSYLPLRLISGGVMPIIFAAAILSLPLLIANFTKN 296
Query: 307 PFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGAR 362
P + V L+P G+ WVY +Y + F+ F I N P ++A L KMG+
Sbjct: 297 PELANIVNTYLSPG---GSGSWVYALVYLISIVFFSYFYSSLIVN-PVDVAQNLKKMGSS 352
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++PGKAT EY+ ++ F G + L ++A T ++ L + +G TS+LI+
Sbjct: 353 IPGIRPGKATSEYIERVINRLTFLGAIFLGLVAIIPTAVERAL-GVPTFRGLGATSLLIL 411
Query: 423 VGSIIELRRSYQAY 436
VG IE + Q Y
Sbjct: 412 VGVAIETAKQVQTY 425
>gi|294055201|ref|YP_003548859.1| preprotein translocase subunit SecY [Coraliomargarita akajimensis
DSM 45221]
gi|293614534|gb|ADE54689.1| preprotein translocase, SecY subunit [Coraliomargarita akajimensis
DSM 45221]
Length = 502
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 214/438 (48%), Gaps = 36/438 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
E+R+R+F T L+ I+R+G IPLPGFD I + +G F GA L
Sbjct: 13 ELRQRIFFTLALLFIARVGANIPLPGFDPGPIKDFFREQADAGGGLVGMFNMFTGGALLN 72
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-- 139
+ F LGI P I ASI+MQ++ + P++ +L++EG G +KI Y +++L +++
Sbjct: 73 GALFALGIMPHISASIIMQLMGAVFPAIARLQQEGDVGRQKINQYTRYLTLIICVVQGLL 132
Query: 140 VIVACYSLPYSIYAA------------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
++VA S P SI + ++ + ++ L G M M W+ + I+ G
Sbjct: 133 LLVALSSNPASIVGSGFNPAEYGNVVIANKFQFLVTGTIFLTAGTMIMVWLGEQITARGI 192
Query: 188 GQGSSLIICVGILTGY---TETLYKMLSQLLGSSVRWW--PFMLGLLGVFTIVTMWAVVV 242
G G SL+I V I++G + Y+M +GS P + +L + VT V +
Sbjct: 193 GNGISLLITVSIISGLPGAVASAYQMFVAPVGSDTPQLGVPQGVLMLALLFAVTAGLVAI 252
Query: 243 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
T+G RK+ +QY A ++P +N +G+ PV+ + +L FP+ +
Sbjct: 253 TQGQRKIPVQY-----AKRVVGRKVYGGQSSFLPLKVNYAGVMPVIFGSAILMFPTQILY 307
Query: 303 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMG 360
LG ++ + S+ YY ++ +F+F+ F ++ + P +IAD L K G
Sbjct: 308 TLGKA--TNMNFLNEFADSLQRGEAAYYILFGLLIFVFSYFWVSLMFKPVQIADDLKKNG 365
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTS 418
IP V+PG+ T ++L + +G L L+++A IL + RI +I G T
Sbjct: 366 GYIPGVRPGEPTAKFLDHVMTRLTLFGALSLTVIALFPDIL-LFTYRIPGNVAIFFGGTG 424
Query: 419 VLIIVGSIIELRRSYQAY 436
+LI VG +++ R + +
Sbjct: 425 MLITVGVLLDTMRQIETF 442
>gi|73661992|ref|YP_300773.1| preprotein translocase subunit SecY [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72494507|dbj|BAE17828.1| preprotein translocase SecY subunit [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 430
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 211/425 (49%), Gaps = 25/425 (5%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 78
SFFK+ E+R ++F T ++VI +IG +IP PG + S G D L FG A
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDSQQGS--QGVTDLLNTFGGGA 64
Query: 79 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGDAGRKKLNNVTRYFAIVLAFI 124
Query: 138 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+++ +A Y S+ ++ A +L G + W+ + I++ G G G S+II
Sbjct: 125 QSIGMAFQFNNYLKGQLIMDQSILSYLLIAVVLTAGTAFLIWLGEQITQFGVGNGISIII 184
Query: 196 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
GIL+ +L + Q +S+ W + ++G+ ++T+ A+ V + RK+ +
Sbjct: 185 FAGILSSLPSSLIQFYQQAFVGQDDTSMAWLKVIALIIGMI-LLTVGAIYVLQAIRKIPI 243
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 310
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPDASWAQ 297
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGK 370
V ++ NP ++G VY + F + + + P+++AD L K G+ +P ++PG+
Sbjct: 298 KVSDVANPSNNIGM--IVYVVLIIAFTYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGE 353
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
T +Y+T++ F G + L+++A I + + + +G TS+LI++G IE
Sbjct: 354 QTKKYITRVLYRLTFVGSIFLAVIAILPIIATKVM-SLPQSIQVGGTSLLIVIGVAIETM 412
Query: 431 RSYQA 435
+S +A
Sbjct: 413 KSLEA 417
>gi|451980703|ref|ZP_21929089.1| Preprotein translocase, membrane subunit SecY [Nitrospina gracilis
3/211]
gi|451762039|emb|CCQ90328.1| Preprotein translocase, membrane subunit SecY [Nitrospina gracilis
3/211]
Length = 438
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 222/451 (49%), Gaps = 42/451 (9%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
+ AESF E++RR+F T ++++ RIG IP PG D + + + G++
Sbjct: 2 SGAESFANIFRIPELKRRVFFTLGVLIVYRIGAHIPTPGIDGAALAEIFEQ-AKGTILGF 60
Query: 74 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
D GA +L+ F LGI P I ASI++Q+L + P L QL+KEG G +KI Y +
Sbjct: 61 FDMFSGGALSRLTIFALGIMPYISASIILQLLTIVSPHLAQLKKEGEQGQKKITQYTRYG 120
Query: 131 SLGFAILEAV-----IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 185
++ +++++ + A S + + M+T L G + + W+ + ISE
Sbjct: 121 TVLLSVIQSSGMAVGLEAMKSPGGAPIVPDPGWEFRMMTMLTLTAGTVFIMWLGEQISER 180
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG-LLGVFTIVTMWAVVVTE 244
G G G SLII GI+ G + M L+G+ ++G LL V + + +V TE
Sbjct: 181 GIGNGISLIIFTGIVAGLPSAI-GMSLDLMGTG--ELSVLIGLLLAVVMMAVVGFIVFTE 237
Query: 245 GC-RKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
G R++ +QY G K+ ++P +N SG+ P + + ++ FP+
Sbjct: 238 GGQRRIPIQYAKRVVGRKMYGGQTS---------HLPLKVNTSGVIPPIFASSIIMFPAT 288
Query: 300 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLN 357
+A + P+ Q V L P +Y I+ +F F F A + P E+AD +
Sbjct: 289 IAQFIDHPWMQTVSAALAPGN------LIYSLIFIGAIFFFCYFYTAVIFNPTEVADNMK 342
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++PG T EY+ +I + F+G + LS + + D+ ++ +N F G T
Sbjct: 343 KHGGFIPGIRPGPKTAEYIDQILSKLTFYGAIYLSFIC---ILPDYLIKYLNIPFYFGGT 399
Query: 418 SVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
S+LI+VG ++ + +++ VM + +++
Sbjct: 400 SLLIVVGVSLDTMQQIESHLVMRNYDGFIKK 430
>gi|428224253|ref|YP_007108350.1| protein translocase subunit SecY [Geitlerinema sp. PCC 7407]
gi|427984154|gb|AFY65298.1| protein translocase subunit secY/sec61 alpha [Geitlerinema sp. PCC
7407]
Length = 441
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/435 (30%), Positives = 219/435 (50%), Gaps = 31/435 (7%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
+A E+F + + +R RL +T L+++ R+G F+P+PG DR D + G V
Sbjct: 10 SAQETFLQMAQAAGLRSRLLLTIGLLILVRLGIFLPVPGIDRAAFSADLQNNNFGGVIGF 69
Query: 74 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWW 129
D G L F LGI P I ASI++Q+L +P+L L+K EG G KI +
Sbjct: 70 LDVFVGGGLSTLGIFALGILPYINASIILQLLTAALPALEDLQKNEGEAGRRKISQITRY 129
Query: 130 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
++LG+A+L++ ++ + L S YA + V + L G+M + W+ + I+E G G
Sbjct: 130 VALGWAVLQSFGLSAFLL--SRYAENPGPIFVAESVIALCAGSMFVMWVGELITEQGVGN 187
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
G+SL+I + I++ +L + + ++ LL VF ++ + V V EG R++
Sbjct: 188 GASLLIFLNIVSSLPRSLGQTIELAQSGDRSTVGGIVILLLVFLVMIVGIVFVQEGTRRI 247
Query: 250 KLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS--ILG 305
+ SA R+ E Y+P +N G+ P++ + +L P LA+ G
Sbjct: 248 PI-------VSARRQVGRRLYPESRSYLPLRLNQGGVMPIIFASAVLILPVSLANNFFRG 300
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIADYLNKMGAR 362
+ + L+P G PW+Y + Y + F+ F I N P ++A L KMGA
Sbjct: 301 NETLNRIALSLSPG---GPMPWLYVSFYLVLILFFSYFYASLIVN-PVDMAQNLKKMGAS 356
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLI 421
IP ++PGKAT EY+ ++ F G + L ++A T ++ R R +G +G TS+LI
Sbjct: 357 IPGIRPGKATSEYVERVLNRLTFLGAIFLGMVAIIPTAVESATRVRTFQG--LGATSLLI 414
Query: 422 IVGSIIELRRSYQAY 436
+VG I+ + Q Y
Sbjct: 415 LVGVAIDTAKQIQTY 429
>gi|392406865|ref|YP_006443473.1| protein translocase subunit secY/sec61 alpha [Anaerobaculum mobile
DSM 13181]
gi|390620001|gb|AFM21148.1| protein translocase subunit secY/sec61 alpha [Anaerobaculum mobile
DSM 13181]
Length = 430
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 215/427 (50%), Gaps = 27/427 (6%)
Query: 30 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLSFFQ 86
R LFV +L+V R+G IP PG D + + F G V L D GA + S F
Sbjct: 17 RILFVLGILLVF-RLGAHIPTPGVDAKAMAS---LFEQGGVLNLFDLFAGGALRRFSIFA 72
Query: 87 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 146
LG++P I ASI+MQ+L ++P++ +++KEG +G KI Y ++ F+ ++AV + +
Sbjct: 73 LGVTPYINASIVMQLLAVVIPAVEKMQKEGEEGRRKIVQYTRISTILFSAIQAVGMVLWL 132
Query: 147 LPYS-IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 205
+ IY SV +VT LV G++ + W+ + IS+ G G G SL+I GI+ E
Sbjct: 133 RSMNVIYVGGISVFVAIVT---LVAGSIAVMWLGEMISDHGIGNGISLLIFAGIVARIPE 189
Query: 206 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 265
++ + +LL + +L L + IV +++ EG R++ +QY + +
Sbjct: 190 SITRTF-KLLRTGELNLITLLLALIIMVIVIAGCILLQEGQRRLPVQYAKRVVGTKVYGG 248
Query: 266 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGAR 325
+IP +N +G+ P++ + +L FPS +A F Q + ++L+P +
Sbjct: 249 Q-----TTFIPLRVNSAGVIPIIFASSVLLFPSTIARFFSGGFAQAISKLLSPSSP---- 299
Query: 326 PWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQAST 383
+Y +Y + F F A + P ++A+ L K G IP ++PG+ T +Y+ K+ +
Sbjct: 300 --LYMVLYVLLIIFFTYFYTAVVFNPADVANNLKKYGGFIPGIRPGRPTADYIEKVLSRV 357
Query: 384 RFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLS 443
G + L+ +A ++L L F G T+VLI+VG +E + +A +M
Sbjct: 358 TLGGAVFLAAIAILPSLLTQMLGITT--FYFGGTAVLIVVGVALETVQQIEAQLLMRHYE 415
Query: 444 KALRRYG 450
+RR G
Sbjct: 416 GLVRRKG 422
>gi|428314351|ref|YP_007125328.1| protein translocase subunit SecY [Microcoleus sp. PCC 7113]
gi|428255963|gb|AFZ21922.1| protein translocase subunit secY/sec61 alpha [Microcoleus sp. PCC
7113]
Length = 448
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 219/441 (49%), Gaps = 36/441 (8%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS-FVSGSVDE 72
A E+F + + +R RL VT L++++R+G F+PLPG DR D + V G +D
Sbjct: 10 TAQETFMQMAQAAGLRGRLLVTIGLLIVARMGIFLPLPGIDRARFSADIQNNSVLGFLDI 69
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 131
G + F LGI P I ASI++Q+L +PSL L+K EG G KI +++
Sbjct: 70 FSGGGIS-AVGIFALGILPFINASIILQLLTAAIPSLENLQKNEGEAGRRKISQLTRYVA 128
Query: 132 LGFAILEAV-IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
G+A++++V I A PY++ + TA L G+M + W+ + ++E G G G
Sbjct: 129 AGWAVIQSVGITAGLLRPYALDGGGP--LFIAETALALTAGSMFVMWLSELVTERGIGNG 186
Query: 191 SSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
+SL+I V I+ +TL + L+Q G +L L+ + IV + V V EG R+
Sbjct: 187 ASLLIFVNIVAVLPKTLGQTIELAQTGGRETVGKVVILLLVFLVMIVGI--VFVQEGTRR 244
Query: 249 VKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG- 305
+ + SA R+ E Y+P +N G+ P++ + +L P+ LA G
Sbjct: 245 IPI-------ISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLILPASLAQFTGG 297
Query: 306 -------SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIADY 355
+ Q + ++ N + G PW+Y +Y + F+ F I N P ++A
Sbjct: 298 SANKGFFAQVHQGLVQVSNYLSPNGPTPWLYVLVYLVLIVFFSYFYASLIVN-PVDMAQN 356
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
L KMGA IP ++PG+ T EY+ ++ F G + L ++A T ++ + +G
Sbjct: 357 LKKMGASIPGIRPGRTTSEYVERVLNRLTFLGAIFLGLVAVVPTAVESA-TGVTTFKGLG 415
Query: 416 FTSVLIIVGSIIELRRSYQAY 436
TS+LI+VG I+ + Q Y
Sbjct: 416 ATSLLILVGVAIDTAKQIQTY 436
>gi|427707972|ref|YP_007050349.1| protein translocase subunit SecY [Nostoc sp. PCC 7107]
gi|427360477|gb|AFY43199.1| protein translocase subunit secY/sec61 alpha [Nostoc sp. PCC 7107]
Length = 437
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 223/437 (51%), Gaps = 38/437 (8%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL VT ++++ R+G F+P+PG DR + +SG+
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGIDR----TRFHEAISGNNSIF 64
Query: 74 GDF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 127
G G L L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 65 GLLDIFSGRGLSTLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQIT 124
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
++++ +AI+++ + + L +A + V TA L G+M + W + I+E G
Sbjct: 125 RYVTVCWAIIQSTAFSAFFLQQ--FALTPGPVFVAETAIALTAGSMFVMWASELITERGI 182
Query: 188 GQGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G+SL+I V I+ ++L L Q+ G + +L ++ + TIV + V V EG
Sbjct: 183 GNGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVVVFLATIVGI--VFVQEG 240
Query: 246 CRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
R++ + SA R+ + E Y+P +N G+ P++ +L+ P ++A+
Sbjct: 241 IRRIPI-------ISARRQVGRRVLAEQRSYLPLRLNSGGVMPIIFAAAILSLPLLIANF 293
Query: 304 LGSPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKM 359
+P + V L+P G+ PWVY +Y + F+ F I N P ++A L KM
Sbjct: 294 TKNPELANIVNTYLSPG---GSAPWVYALVYLTSIVFFSYFYSSLIVN-PVDVAQNLKKM 349
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G+ IP ++PGKAT EY+ ++ F G + L ++A T ++ L ++ +G TS+
Sbjct: 350 GSSIPGIRPGKATSEYIERVINRLTFLGAIFLGLVAIIPTAVESAL-KVPTFKGLGATSL 408
Query: 420 LIIVGSIIELRRSYQAY 436
LI+VG I+ + Q Y
Sbjct: 409 LILVGVAIDTAKQVQTY 425
>gi|283455386|ref|YP_003359950.1| secY protein translocase subunit secY [Bifidobacterium dentium Bd1]
gi|283102020|gb|ADB09126.1| secY Protein translocase subunit secY [Bifidobacterium dentium Bd1]
Length = 457
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 208/437 (47%), Gaps = 24/437 (5%)
Query: 13 SSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE 72
S L ++F E+R ++ T +I+I R+G F+P PG D ++ Q S S +
Sbjct: 10 ESQLRTLIQAFKTKELRNKILFTLGIIIIYRVGSFVPTPGVDYTVVQQCVGKMSSTSENF 69
Query: 73 LG-----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 127
+G GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y
Sbjct: 70 IGLVNLFSGGAMLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGEAKLTQYT 129
Query: 128 WWISLGFAILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICD 180
++++G A+L++ + A ++ S SV +++V ++ G + W+ +
Sbjct: 130 RYLTIGLAVLQSTTILVTARSGALFNYQCSQVVPDGSVWNLLVMVLIMTGGTGLIMWMAE 189
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I++ G GQG S++I + I +G+ L+++ G+ W F ++GV ++ + V
Sbjct: 190 LITDKGLGQGMSILIFMSICSGFLPQLWEIGWGTKGTDGNWGKFAT-VVGVLLVIMILVV 248
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V R++ +QY + S Y+P IN SG+ P + + +LA P+++
Sbjct: 249 YVELSQRRIPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLI 303
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNK 358
A S Q + +N + W Y +YA + F F +I P E AD + +
Sbjct: 304 AQFGNSD--QSWVKWINSNLANTTSVW-YIALYALMIVFFCFFYTEITFNPDETADNMKQ 360
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
G IP ++ G AT YL + G + L +A T+L L +N G T+
Sbjct: 361 YGGFIPGIRAGSATSRYLNYVMNRLNTVGAVYLLFVALIPTVLIMAL-NLNTKLPFGGTT 419
Query: 419 VLIIVGSIIELRRSYQA 435
+LII G ++ R +A
Sbjct: 420 ILIIAGVGLDTLRQAKA 436
>gi|75906932|ref|YP_321228.1| preprotein translocase subunit SecY [Anabaena variabilis ATCC
29413]
gi|75700657|gb|ABA20333.1| protein translocase subunit secY/sec61 alpha [Anabaena variabilis
ATCC 29413]
Length = 437
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 135/434 (31%), Positives = 219/434 (50%), Gaps = 32/434 (7%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVD 71
A E+F + + +R RL VT ++++ R+G F+P+PG DR + S + G +D
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGIDRTRFAEAISSNNAIFGLLD 68
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 130
G L F LGI P I ASI++Q+L +PSL L+K EG G KI ++
Sbjct: 69 IFSGRGLS-TLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITRYV 127
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
++G+AI +++ A +L +A V TA L G+M + W + I+E G G G
Sbjct: 128 TVGWAIFQSL--AFSALFLQQFALQPGPVFVAETAIALTAGSMFVMWASELITERGIGNG 185
Query: 191 SSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
+SL+I V I+ ++L L Q+ G + +L L+ + TIV + V V EG R+
Sbjct: 186 ASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFLATIVGI--VFVQEGIRR 243
Query: 249 VKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
+ + SA R+ + E Y+P + G+ P++ +L+ P ++A+ +
Sbjct: 244 IPI-------ISARRQVGRRVLAEQRSYLPLRLISGGVMPIIFAAAILSLPLLIANFTKN 296
Query: 307 PFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGAR 362
P + V L+P G+ WVY +Y + F+ F I N P ++A L KMG+
Sbjct: 297 PELANIVNTYLSPG---GSGSWVYALVYLISIVFFSYFYSSLIVN-PVDVAQNLKKMGSS 352
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++PGKAT EY+ ++ F G + L ++A T ++ L + +G TS+LI+
Sbjct: 353 IPGIRPGKATSEYIERVINRLTFLGAIFLGLVAIIPTAVERAL-GVPTFRGLGATSLLIL 411
Query: 423 VGSIIELRRSYQAY 436
VG IE + Q Y
Sbjct: 412 VGVAIETAKQVQTY 425
>gi|330444131|ref|YP_004377117.1| preprotein translocase subunit SecY [Chlamydophila pecorum E58]
gi|328807241|gb|AEB41414.1| preprotein translocase SecY subunit [Chlamydophila pecorum E58]
Length = 457
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 137/468 (29%), Positives = 226/468 (48%), Gaps = 58/468 (12%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--EL 73
+ + F SE+R++LF T L+ R+G FIP+PG + + + S + +L
Sbjct: 1 MTTLKQIFSISELRQKLFYTFALLAACRVGVFIPVPGINGERAVAYFKQLLGSSQNLFQL 60
Query: 74 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLV-QLRKEGLDGHEKIKSYIWW 129
D GA +++ LG+ P I ASI++Q+L +PSL +LR+ G +I
Sbjct: 61 ADIFSGGAFAQMTVIALGVVPYISASIIVQLLLVFMPSLQRELRESPDQGKRRIGRLTRM 120
Query: 130 ISLGFAILEAVIVACYSL-----------PYSIYAASHSVKHV--MVTAFLLVCGAMTMS 176
++G AI+++++ A ++L P + V + M T ++ G + +
Sbjct: 121 FTVGLAIVQSLLFAKFALRMNLTIPGIVLPILVSPQIFGVPLLFYMTTVIVMTTGTLLLM 180
Query: 177 WICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGSSVRWWPFMLGLL------ 229
WI + IS+ G G G SLII +GIL + L ++++L LGS P LGL+
Sbjct: 181 WIGEQISDKGIGNGISLIIALGILASFPSVLGSIVNKLHLGSQ---DPSDLGLVSILLLC 237
Query: 230 GVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVE---PYIPFNINPSGMQP 286
VF V + +++ EG RK+ +QY AR EV Y+P +N +G+ P
Sbjct: 238 AVFVFVLIATILIIEGVRKIPVQY--------ARRVIGRREVPGGGSYLPLKVNYAGVIP 289
Query: 287 VLTTTYLLAFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD 344
V+ + LL FP+ + + S + + V +L+P + WVY +Y F + F F
Sbjct: 290 VIFASSLLMFPATIGQFMSSESSWIKRVASMLSPGS------WVYSLLYVFLIIFFTYFW 343
Query: 345 IANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILD 402
A P++IA + K A IP ++ GKAT YL G + L+++A +IL
Sbjct: 344 TATQFHPEQIASEMKKNNAFIPGIRQGKATQGYLEYTMNRVTLLGAVFLAVIAILPSILG 403
Query: 403 HYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRY 449
L N + +G T++LIIVG I++ + A+ +M RRY
Sbjct: 404 RVLHVDSNVSYFLGGTAMLIIVGVILDTMKQVDAFLLM-------RRY 444
>gi|428773989|ref|YP_007165777.1| protein translocase subunit SecY [Cyanobacterium stanieri PCC 7202]
gi|428688268|gb|AFZ48128.1| protein translocase subunit secY/sec61 alpha [Cyanobacterium
stanieri PCC 7202]
Length = 437
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 218/436 (50%), Gaps = 37/436 (8%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL +T L+++ R+G +IP+PG DR + +L
Sbjct: 10 TAQETFMQMAQAAGLRGRLLITVGLLIVVRLGIYIPVPGIDREAFEAAVQNLPFLGFLDL 69
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 132
G + F LGI P I ASI++Q+L VP+L L+K EG G KI +++L
Sbjct: 70 FTGGGLATVGIFALGILPYINASIIIQLLTSAVPALEDLQKNEGEAGRRKIAQITRYVAL 129
Query: 133 GFAILEAVIVACYSL-PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
G+AI++A + L PY+I S S ++ T + G+M + W+ + I+E G G G+
Sbjct: 130 GWAIIQATGITIGLLRPYAI---SDSPIFIVETVLAITAGSMFVMWLSEVITERGLGNGA 186
Query: 192 SLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
SL+I V I+ TL + +Q G +L L+ + IV + V V EG R++
Sbjct: 187 SLLIFVNIVAVLPRTLGNTIDYAQTGGREAIAQVVLLILVFLVMIVGI--VFVQEGTRRI 244
Query: 250 KLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GS 306
+ SA R+ E Y+P +N G+ P++ + +L PS +A G+
Sbjct: 245 PI-------ISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLVLPSSVAGFADGT 297
Query: 307 PFWQHVKEILNPETSVGARP---WVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGA 361
PF + + ++ RP W Y +Y+ + F+ F + + P++IA L KMG+
Sbjct: 298 PFNTFINNV-----ALALRPGSIW-YVVVYSLLIVFFSYFYASLISNPEDIAQNLKKMGS 351
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVL 420
IP ++PGKAT+ Y+ + G + L+I+AT T ++ +GF G TS+L
Sbjct: 352 SIPGIRPGKATVAYIEGVLNRLTLLGAIFLTIVATVPTFVESATGVTTFQGF--GATSLL 409
Query: 421 IIVGSIIELRRSYQAY 436
I+VG I+ + Q Y
Sbjct: 410 ILVGVAIDTAKQVQTY 425
>gi|256544526|ref|ZP_05471899.1| preprotein translocase, SecY subunit [Anaerococcus vaginalis ATCC
51170]
gi|256399851|gb|EEU13455.1| preprotein translocase, SecY subunit [Anaerococcus vaginalis ATCC
51170]
Length = 423
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 216/441 (48%), Gaps = 25/441 (5%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ ++ + EIR++ + T V+++I R+G IP+P D + + Y VD L
Sbjct: 1 MLDTLKRAWGEEEIRKKFYFTLVMLLIYRLGNNIPIPFIDAQKLAAAYKGMEGTLVDYLN 60
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G LS F LG+ P I ASI+MQ+L ++P L +L KEG G + I+ Y ++++
Sbjct: 61 MLTGGGLSTLSIFALGVQPYITASIVMQLLTVVIPRLEELTKEGEAGRKTIQKYTRYMTI 120
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
AI +A+ + ++ +A+ K VM +L+ G M ++W+ +TI+E G G G S
Sbjct: 121 FLAIFQAIAITNGLYGAALSSATPFQKIVM--NVVLIGGTMLVTWMGETITEKGIGNGVS 178
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
+II +GI+ +TL + L +++ W ++ L V + ++ V +TEG RK+ +Q
Sbjct: 179 IIIFMGIIANVPKTLKTWKTGLHYNTITWISILIMAL-VVIFIVVFTVKITEGERKIPVQ 237
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
Y A +IP +N SG+ P++ + +LA PS + S F +
Sbjct: 238 Y-----AKRVVGRKMYGGQSTHIPVKVNMSGVMPIIFASAVLAIPSTI-----SLFMGNA 287
Query: 313 KEILNPETSVGARPWVYYTIYA-----FFVFLFNIFDIANLPKEIADYLNKMGARIPNVK 367
LN S +V Y + F + +N+ + E A L + G IP ++
Sbjct: 288 NGGLNQFFSKSTYGFVIYLVVQAVLILVFAYFYNMIQFNTV--EYAKQLQQNGGFIPGIR 345
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PGK T +YL K+ F G + L++L + +L S G +SV+I+VG I+
Sbjct: 346 PGKPTSDYLAKVGNKITFIGAISLALLTIVPALSSRFL---GLNLSFGGSSVIIVVGVIL 402
Query: 428 ELRRSYQAYNVMPSLSKALRR 448
E + +A M + L R
Sbjct: 403 ETVKQIEAMLTMKNYKGFLNR 423
>gi|427732031|ref|YP_007078268.1| protein translocase subunit SecY [Nostoc sp. PCC 7524]
gi|427367950|gb|AFY50671.1| protein translocase subunit secY/sec61 alpha [Nostoc sp. PCC 7524]
Length = 437
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 220/437 (50%), Gaps = 38/437 (8%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL VT ++++ R+G F+P+PG DR + +SG+
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGIDR----TRFAEAISGNNSIF 64
Query: 74 GDF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 127
G G L L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 65 GLLDIFSGRGLSTLGIFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQIT 124
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
+++LG+ I+++V A +L +A + V TA L G+M + W + I+E G
Sbjct: 125 RYVALGWGIVQSV--AFSALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGI 182
Query: 188 GQGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G+SL+I V I+ ++L L Q+ G + +L L+ + TIV + V V EG
Sbjct: 183 GNGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFMLTIVGI--VFVQEG 240
Query: 246 CRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
R++ + SA R+ + E Y+P + G+ P++ +L+ P ++A+
Sbjct: 241 LRRIPI-------ISARRQVGRRVLAEQRSYLPLRLISGGVMPIIFAAAILSLPLLIANF 293
Query: 304 LGSPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKM 359
+P + V L+P G+ WVY +Y + F+ F I N P +IA L KM
Sbjct: 294 TKNPELANIVNTYLSPG---GSGSWVYALVYLISIVFFSYFYSSLIIN-PVDIAQNLKKM 349
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G+ IP ++PGKAT EY+ ++ G + L ++A T ++ L + +G TS+
Sbjct: 350 GSSIPGIRPGKATSEYIERVINRLTLLGAVFLGLVAIIPTAVERAL-GVPTFRGLGATSL 408
Query: 420 LIIVGSIIELRRSYQAY 436
LI+VG IE + Q Y
Sbjct: 409 LILVGVAIETAKQVQTY 425
>gi|317968834|ref|ZP_07970224.1| preprotein translocase subunit SecY [Synechococcus sp. CB0205]
Length = 438
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 209/418 (50%), Gaps = 26/418 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 81
++R R+ +T L+++ R+G +IP+PG DR Q + +F + LG G
Sbjct: 23 DLRDRVLITLGLLLLVRLGIYIPVPGIDR----QAFQAFAAQGGSLLGFLDIFTGGGISA 78
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAV 140
L F LGI P I ASI++Q+L +P L L+K EG G KI Y +++LG+ + +++
Sbjct: 79 LGVFALGILPFINASIIIQLLTSALPQLEDLQKNEGEAGRRKIAQYTRYVALGWGLFQSI 138
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ A PY++ + + V+ TA LV G+M + W+ + I+E G GQG+SL+I + I+
Sbjct: 139 VFALILRPYAL-PGTPDLVFVVQTAIALVTGSMVVMWLSEVITERGIGQGASLVIYLNIV 197
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
L + ++ L+ VF I + V V EG R++ + S
Sbjct: 198 ATLPRALGSTIELAQTGGREAVGGIVVLVAVFLITIVGIVCVEEGSRRI-------PIVS 250
Query: 261 AARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
A R+ + I+ + Y+P +N G+ P++ + ++ P +A+ +P V L+P
Sbjct: 251 AKRQVGGAGISARQSYLPLKLNAGGVMPIIFASAVVFLPLQIANFSKNPTLIQVASFLSP 310
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
+S PWVY ++ + F+ F + P ++A L + G IP V+PG AT YL
Sbjct: 311 NSST---PWVYALLFFGLIIGFSFFYATLTVRPVDVASNLKRGGVAIPGVRPGSATTAYL 367
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
T IQ G L L +A + ++ R+ +G TS+LI+VG I+ + Q
Sbjct: 368 TGIQNRLTLLGALFLGAVAIVPSAVESA-TRVQTFQGLGATSLLILVGVAIQTAKQLQ 424
>gi|257058147|ref|YP_003136035.1| preprotein translocase subunit SecY [Cyanothece sp. PCC 8802]
gi|256588313|gb|ACU99199.1| preprotein translocase, SecY subunit [Cyanothece sp. PCC 8802]
Length = 438
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 213/443 (48%), Gaps = 50/443 (11%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--------- 64
A E+F + + +R RL +T L+++ R G FIP+PG DR S
Sbjct: 10 TAQETFLQMAQAAGLRGRLLITIGLLILVRFGIFIPIPGIDREAFAAAISSSPVLGFLDI 69
Query: 65 FVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKI 123
F G + LG F LGI P I ASI++Q+L +P+L L+K EG G KI
Sbjct: 70 FTGGGISTLG---------IFALGILPYINASIIIQLLTAAIPALEDLQKNEGEAGRRKI 120
Query: 124 KSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTIS 183
Y ++SLG+A+++++ + L YA ++S V+ T L G+M + W+ + I+
Sbjct: 121 AQYTRYVSLGWAVIQSMGITIGLL--RPYAFNNSAWFVVETVIALTAGSMFVMWLSEIIT 178
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 243
E G G G+SL+I V I+ TL + + ++ LL VF I+ + V V
Sbjct: 179 ERGIGNGASLLIFVSIVASLPRTLGNTIDYAQTGGRQAVAQVVILLFVFLIMIVGIVFVQ 238
Query: 244 EGCRKVKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
EG R++ + SA R+ E Y+P +N G+ P++ + +L P LA
Sbjct: 239 EGTRRIPI-------ISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLILPQSLA 291
Query: 302 SILG-----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIA 353
G S + L P + W Y +Y+ + F+ F I N P++++
Sbjct: 292 GFFGNQGTVSQVLVQIANTLQPGS------WTYIGVYSLLILFFSYFYASLIVN-PEDVS 344
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS 413
L KMGA IP ++PG+ T +YL + F G + LS++AT T+++ +
Sbjct: 345 KNLKKMGASIPGIRPGEKTKQYLEGVLNRLTFLGAVFLSVVATVPTLVEGA-TGVTTFQG 403
Query: 414 IGFTSVLIIVGSIIELRRSYQAY 436
+G TS+LI+VG I+ + Q Y
Sbjct: 404 LGATSLLILVGVAIDTAKQIQTY 426
>gi|443316468|ref|ZP_21045910.1| protein translocase subunit secY/sec61 alpha [Leptolyngbya sp. PCC
6406]
gi|442783901|gb|ELR93799.1| protein translocase subunit secY/sec61 alpha [Leptolyngbya sp. PCC
6406]
Length = 436
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 199/402 (49%), Gaps = 32/402 (7%)
Query: 47 FIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAELKLSFFQLGISPQIVASILMQ 100
FIP+PG DR Q + SGS+ F G L F LGI P I ASI+MQ
Sbjct: 43 FIPVPGIDRVAFGQ---AIESGSLGGFIGFIDIFVGGGLSALGIFALGILPFINASIIMQ 99
Query: 101 VLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVK 159
+L +P+L L+K EG G ++ +++ G+AIL++ +++ + L S +A +
Sbjct: 100 LLTAALPALEDLQKNEGEAGRRRVSQITRYVAFGWAILQSALLSIFLL--SPFAEQPGIF 157
Query: 160 HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSV 219
V+ T L G+M + W+ + I+E G G G+SL+I + I++ +L L G
Sbjct: 158 FVVQTVIALTAGSMFVMWVGEVITERGIGNGASLLIFINIVSTLPRSLSLTLELAKGEDS 217
Query: 220 RWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPF 277
R ++ LL VF + + V V EG R++ + SA R+ E Y+P
Sbjct: 218 RVGGVIILLL-VFLAMIVGIVFVQEGTRRIPI-------ISARRQVGRKLYLEQSNYLPL 269
Query: 278 NINPSGMQPVLTTTYLLAFPSILASILGSP-FWQHVKEILNPETSVGARPWVYYTIYAFF 336
+N G+ P++ + +L P L + +P F V LNP + WVY +Y
Sbjct: 270 RLNQGGVMPIIFASAVLVLPLSLTQYVSNPAFVGAVNTYLNPTS------WVYVLLYLVM 323
Query: 337 VFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSIL 394
+ F+ F + P++++ L KMGA IP ++PGKAT EY+ ++ F G + L ++
Sbjct: 324 ILFFSYFYASLVVNPEDMSRNLKKMGASIPGIRPGKATTEYIGRVLNRLTFLGAIFLGLV 383
Query: 395 ATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
A + ++ R+ +G TS+LI+VG IE + Q Y
Sbjct: 384 AVIPSAVEGA-TRVQTFQGLGATSLLILVGVAIETAKQVQTY 424
>gi|220906737|ref|YP_002482048.1| preprotein translocase subunit SecY [Cyanothece sp. PCC 7425]
gi|219863348|gb|ACL43687.1| preprotein translocase, SecY subunit [Cyanothece sp. PCC 7425]
Length = 436
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 214/432 (49%), Gaps = 30/432 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF-VSGSVDE 72
A E+F + + +R RL VT L+++ R+G ++P+PG DR++ Q + V G +D
Sbjct: 10 TAQETFAQMAQAAGLRGRLLVTIGLLILVRLGIYLPVPGIDRQVFAQTIQNNPVIGFLDI 69
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 131
G L F LGI P I ASI++Q+L +PSL +L+K EG G KI +++
Sbjct: 70 FSGGGLS-ALGIFALGILPYINASIILQLLTAALPSLERLQKDEGEAGRRKISQITRYVA 128
Query: 132 LGFAILEAVIVACY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
L +AI+++ +A + S P +++ MV A L G+M + W+ + I+E G G
Sbjct: 129 LVWAIIQSTGIAIWVSSTPGAVFNPGPIFIGEMVLA--LTAGSMFVMWVSELITERGVGN 186
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
G+SL+I + I+ ++ + + +L L VF + + V V EG R++
Sbjct: 187 GASLLIFLSIVAYLPTSINQTIELAQSGGSVGGVVILAL--VFLAMIVGIVFVQEGTRRI 244
Query: 250 KLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
+ SA R+ E Y+P +N G+ P++ + +L PS LA +
Sbjct: 245 PI-------ISARRQVGRRLYREQTSYLPLRLNQGGVMPIIFASAVLVLPSYLAGFTKN- 296
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPN 365
+ V +I N T G PW+Y Y + F+ F + P ++A L KMGA IP
Sbjct: 297 --ETVAQIANYITPNGPTPWLYVLFYLVLILFFSYFYASLVVNPVDMAQNLKKMGASIPG 354
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVG 424
++PG+AT EY+ + F G + L +A T ++ R GF G TS+LI+VG
Sbjct: 355 IRPGRATSEYVEGVLNRLTFLGAIFLGAVAIIPTAVESATRVTTFRGF--GATSLLILVG 412
Query: 425 SIIELRRSYQAY 436
I+ + Q Y
Sbjct: 413 VAIDTAKQIQTY 424
>gi|218245122|ref|YP_002370493.1| preprotein translocase subunit SecY [Cyanothece sp. PCC 8801]
gi|218165600|gb|ACK64337.1| preprotein translocase, SecY subunit [Cyanothece sp. PCC 8801]
Length = 438
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 213/443 (48%), Gaps = 50/443 (11%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--------- 64
A E+F + + +R RL +T L+++ R G FIP+PG DR S
Sbjct: 10 TAQETFLQMAQAAGLRGRLLITIGLLILVRFGIFIPIPGIDREAFAAAISSSPVLGFLDI 69
Query: 65 FVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKI 123
F G + LG F LGI P I ASI++Q+L +P+L L+K EG G KI
Sbjct: 70 FTGGGISTLG---------IFALGILPYINASIIIQLLTAAIPALEDLQKNEGEAGRRKI 120
Query: 124 KSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTIS 183
Y ++SLG+A+++++ + L YA ++S V+ T L G+M + W+ + I+
Sbjct: 121 AQYTRYVSLGWAVIQSMGITIGLL--RPYAFNNSAWFVVETVIALTAGSMFVMWLSEIIT 178
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 243
E G G G+SL+I V I+ TL + + ++ LL VF I+ + V V
Sbjct: 179 ERGIGNGASLLIFVSIVASLPRTLGNTIDYAQTGGRQAVAQVVILLFVFLIMIVGIVFVQ 238
Query: 244 EGCRKVKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
EG R++ + SA R+ E Y+P +N G+ P++ + +L P LA
Sbjct: 239 EGTRRIPI-------ISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLILPQSLA 291
Query: 302 SILG-----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIA 353
G S + L P + W Y +Y+ + F+ F I N P++++
Sbjct: 292 GFFGNQGTVSQVLVQIANALQPGS------WTYIGVYSLLILFFSYFYASLIVN-PEDVS 344
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS 413
L KMGA IP ++PG+ T +YL + F G + LS++AT T+++ +
Sbjct: 345 KNLKKMGASIPGIRPGEKTKQYLEGVLNRLTFLGAVFLSVVATVPTLVEGA-TGVTTFQG 403
Query: 414 IGFTSVLIIVGSIIELRRSYQAY 436
+G TS+LI+VG I+ + Q Y
Sbjct: 404 LGATSLLILVGVAIDTAKQIQTY 426
>gi|325848885|ref|ZP_08170395.1| preprotein translocase, SecY subunit [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480529|gb|EGC83591.1| preprotein translocase, SecY subunit [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 423
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 214/441 (48%), Gaps = 25/441 (5%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ ++ + EIR++ + T V+++I R+G IP+P D + + Y VD L
Sbjct: 1 MLDTLKRAWGEEEIRKKFYFTLVMLLIYRLGNNIPIPFIDAQKLAAAYKGMEGTLVDYLN 60
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G LS F LG+ P I ASI+MQ+L ++P L +L KEG G + I+ Y ++++
Sbjct: 61 MLTGGGLSTLSIFALGVQPYITASIVMQLLTVVIPRLEELTKEGEAGRKTIQKYTRYMTI 120
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
AI +A +A + Y +S + +V +L+ G M ++W+ +TI+E G G G S
Sbjct: 121 FLAIFQA--IAITNGLYGAALSSATPFQKLVMNVVLIGGTMLVTWMGETITEKGIGNGVS 178
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
+II +GI+ +TL + L +++ W ++ + V + ++ V +TEG RK+ +Q
Sbjct: 179 IIIFMGIIANVPKTLKTWKTGLHYNTISWLSILV-MAIVVIFIVVFTVRITEGERKIPVQ 237
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
Y A +IP +N SG+ P++ + +LA PS + S F
Sbjct: 238 Y-----AKRVVGRKMYGGQSTHIPVKVNMSGVMPIIFASAVLAIPSTI-----SLFMGRA 287
Query: 313 KEILNPETSVGARPWVYYTIYA-----FFVFLFNIFDIANLPKEIADYLNKMGARIPNVK 367
LN S ++ Y + F + +N+ + E A L + G +P ++
Sbjct: 288 NGGLNQFFSKSTHGFIIYLVVQAALILVFAYFYNMIQFNTV--EYAKQLQQNGGFVPGIR 345
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PGK T +YL K+ F G + L++L + +L S G +SV+I+VG I+
Sbjct: 346 PGKPTSDYLAKVGNKITFIGAISLALLTIVPALSSRFL---GLNLSFGGSSVIIVVGVIL 402
Query: 428 ELRRSYQAYNVMPSLSKALRR 448
E + +A M + L R
Sbjct: 403 ETVKQIEAMLTMKNYKGFLNR 423
>gi|212716591|ref|ZP_03324719.1| hypothetical protein BIFCAT_01520 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|225351025|ref|ZP_03742048.1| hypothetical protein BIFPSEUDO_02607 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|212660295|gb|EEB20870.1| hypothetical protein BIFCAT_01520 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|225158481|gb|EEG71723.1| hypothetical protein BIFPSEUDO_02607 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 445
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 208/429 (48%), Gaps = 24/429 (5%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++ E+R ++ T +I+I RIG FIP PG D +++ Q S S S + +G
Sbjct: 6 QALKTKELRNKILFTLGIIIIYRIGSFIPTPGVDYKVVQQCVGSMNSTSENFIGLVNLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGAMLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGLA 125
Query: 136 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+L++ + A ++ S SV +++V ++ G + W+ + I++ G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCSQVVPDGSVWNLVVMVLIMTGGTGLIMWMAELITDKGLG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
QG S++I + I +G+ L+++ G+ W F ++GV ++ + + V R+
Sbjct: 186 QGMSILIFMSICSGFLPQLWEIGWGTKGTDGNWAKFA-AVVGVLLVIMILVIYVELSQRR 244
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGKSD 298
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNV 366
VK I N + W Y +YA + F F +I P E AD + + G IP +
Sbjct: 299 QSWVKWI-NSNLANTTSVW-YIALYALMIVFFCFFYTEITFNPDETADNMKQYGGFIPGI 356
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+ G AT YL+ + G + L +A T+L L +N G T++LII G
Sbjct: 357 RAGSATSRYLSYVMNRLNTVGAVYLLFVALIPTVLIMAL-DLNTKLPFGGTTILIIAGVG 415
Query: 427 IELRRSYQA 435
++ R +A
Sbjct: 416 LDTLRQAKA 424
>gi|298491416|ref|YP_003721593.1| preprotein translocase subunit SecY ['Nostoc azollae' 0708]
gi|298233334|gb|ADI64470.1| preprotein translocase, SecY subunit ['Nostoc azollae' 0708]
Length = 437
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 222/437 (50%), Gaps = 38/437 (8%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL VT ++++ R+G F+P+PG +R + + +SG+
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGINR----ERFAEAISGNNSIF 64
Query: 74 GDF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 127
G G L L F LGI P I ASI++Q+L +PSL L+K EG G +I
Sbjct: 65 GLLDIFSGRGLSTLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRQISQIT 124
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
++++ +AI+++V A +L +A + V TA L G+M + W + I+E G
Sbjct: 125 RYVTVAWAIIQSV--AFSALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGI 182
Query: 188 GQGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G+SL+I V I+ ++L L Q+ G + +L L+ + TI+ + V V EG
Sbjct: 183 GNGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFLATIIGI--VFVQEG 240
Query: 246 CRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
R++ + SA R+ + E ++P +N G+ P++ +L+ P ++A+
Sbjct: 241 MRRIPI-------ISARRQVGRRVLAEQRSFLPLRLNQGGVMPIIFAAAILSLPLLVANF 293
Query: 304 L-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKM 359
+ V L+P G+ WVY +Y + F+ F I N P ++A L KM
Sbjct: 294 TKNADLANIVNTYLSPS---GSGSWVYALVYMISIVFFSYFYSSLILN-PVDVAQNLKKM 349
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G+ IP ++PGKAT EY+ ++ + F G L L ++A T ++ L + +G TS+
Sbjct: 350 GSSIPGIRPGKATSEYIERVSSRLTFLGALFLGLVAIIPTAVESTL-NVPTFRGLGATSL 408
Query: 420 LIIVGSIIELRRSYQAY 436
LI+VG I+ R Q Y
Sbjct: 409 LILVGVAIDTARQIQTY 425
>gi|171741253|ref|ZP_02917060.1| hypothetical protein BIFDEN_00328 [Bifidobacterium dentium ATCC
27678]
gi|306823548|ref|ZP_07456923.1| preprotein translocase subunit SecY [Bifidobacterium dentium ATCC
27679]
gi|309802966|ref|ZP_07697067.1| preprotein translocase, SecY subunit [Bifidobacterium dentium
JCVIHMP022]
gi|171276867|gb|EDT44528.1| preprotein translocase, SecY subunit [Bifidobacterium dentium ATCC
27678]
gi|304553255|gb|EFM41167.1| preprotein translocase subunit SecY [Bifidobacterium dentium ATCC
27679]
gi|308220433|gb|EFO76744.1| preprotein translocase, SecY subunit [Bifidobacterium dentium
JCVIHMP022]
Length = 445
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 207/429 (48%), Gaps = 24/429 (5%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++F E+R ++ T +I+I R+G F+P PG D ++ Q S S + +G
Sbjct: 6 QAFKTKELRNKILFTLGIIIIYRVGSFVPTPGVDYTVVQQCVGKMSSTSENFIGLVNLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGAMLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGLA 125
Query: 136 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+L++ + A ++ S SV +++V ++ G + W+ + I++ G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCSQVVPDGSVWNLLVMVLIMTGGTGLIMWMAELITDKGLG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
QG S++I + I +G+ L+++ G+ W F ++GV ++ + V V R+
Sbjct: 186 QGMSILIFMSICSGFLPQLWEIGWGTKGTDGNWGKFAT-VVGVLLVIMILVVYVELSQRR 244
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY + S Y+P IN SG+ P + + +LA P+++A G+
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGNSD 298
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNV 366
VK I N + W Y +YA + F F +I P E AD + + G IP +
Sbjct: 299 QSWVKWI-NSNLANTTSVW-YIALYALMIVFFCFFYTEITFNPDETADNMKQYGGFIPGI 356
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+ G AT YL + G + L +A T+L L +N G T++LII G
Sbjct: 357 RAGSATSRYLNYVMNRLNTVGAVYLLFVALIPTVLIMAL-NLNTKLPFGGTTILIIAGVG 415
Query: 427 IELRRSYQA 435
++ R +A
Sbjct: 416 LDTLRQAKA 424
>gi|338211184|ref|YP_004655237.1| preprotein translocase subunit SecY [Runella slithyformis DSM
19594]
gi|336305003|gb|AEI48105.1| preprotein translocase, SecY subunit [Runella slithyformis DSM
19594]
Length = 437
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 220/426 (51%), Gaps = 38/426 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
E++ R+ T +LI + R+GY+I LPG D + D SG + L F GA K S
Sbjct: 16 ELKNRILYTLLLIAVYRLGYYIVLPGVDSSKLNID----TSGLLGLLDTFLGGAFSKASI 71
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
F LGI P I ASI +Q+L +P +++KEG G +K+ +++ I +++
Sbjct: 72 FALGIMPYISASIAIQLLTMALPYFQKMQKEGESGRKKLNQITRVLTIFVTIAQSISYLQ 131
Query: 145 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 204
++ S + + + F+L G + W+ + I++ G G G+S++I +GI++ +
Sbjct: 132 TTISTDALLISRTA-FTISSVFILTAGTIFCMWLGERITDRGIGNGTSMLIMIGIVSRFP 190
Query: 205 ETLYK-MLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFKLA 259
+Y+ +S+ G ++ F+L ++ +F +V M+AV +T+ R+V +QY G K+
Sbjct: 191 RAIYQEAVSRGTGEAL---IFVLEIVALF-LVVMFAVALTQAVRRVPIQYAKQVVGNKVM 246
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--SPFWQHVKEILN 317
R+ Y+P +N SG+ P++ L+ PS++A + S F V N
Sbjct: 247 GGQRQ---------YLPLKLNTSGVMPIIFAQALMFIPSLIAGLFAEKSDFASSVATTFN 297
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEY 375
T+ W Y ++A + +F F IA P++IAD + + G IP VKPG +T ++
Sbjct: 298 DYTT-----WQYNGLFATLIIVFTFFYTAIAISPQQIADDMKRGGGFIPGVKPGISTSDF 352
Query: 376 LTKIQASTRFWGGLLLSILATSSTI--LDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
+ + GG+LL+++A ++ + R + F G TS+LI+VG +++ +
Sbjct: 353 IATVLDRITLPGGILLAVVAILPSLASMTGMTREFAQFF--GGTSLLILVGVVLDTLQQV 410
Query: 434 QAYNVM 439
++Y +M
Sbjct: 411 ESYLLM 416
>gi|119511161|ref|ZP_01630278.1| preprotein translocase SecY [Nodularia spumigena CCY9414]
gi|119464149|gb|EAW45069.1| preprotein translocase SecY [Nodularia spumigena CCY9414]
Length = 437
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 213/432 (49%), Gaps = 28/432 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL--SFVSGSVD 71
A E+F + + +R RL VT ++++ R+G F+P+PG DR + + V G +D
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGLDRARFAEAIAGNNAVFGLLD 68
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 130
G L F LGI P I ASI++Q+L +PSL L+K EG G KI ++
Sbjct: 69 IFSGRGLS-TLGIFALGILPFINASIIIQLLTAAIPSLENLQKNEGEQGRRKISQITRYV 127
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
++ +A +++V + L +A + + V+ TA L G+M + W + I+E G G G
Sbjct: 128 TVVWATIQSVAFSAIFLKQ--FALNPGIPFVLETAIALTAGSMFVMWASELITERGLGNG 185
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
+SL+I V I+ + L + + ++ L+ VF + + V V EG R++
Sbjct: 186 ASLLIFVNIVASLPKALGDTIDLVQVGGRETIGRVIVLILVFLVTIVGIVFVQEGIRRIP 245
Query: 251 LQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ SA R+ + E Y+P +N G+ P++ +L+ P ++A+ +
Sbjct: 246 I-------ISARRQVGRRVLAEQRSYLPLRLNSGGVMPIIFAAAILSLPLLIANFTRN-- 296
Query: 309 WQHVKEILNPETSVGAR-PWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGARIP 364
+ I+N S G WVY +Y + F+ F I N P ++A L KMG+ IP
Sbjct: 297 -TEIANIVNTYLSPGGSGAWVYALVYLVSIVFFSYFYSSLIVN-PVDVAQNLKKMGSSIP 354
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PGKAT EYL ++ F G + L +A T ++ L + +G TS+LI+VG
Sbjct: 355 GIRPGKATSEYLERVINRLTFLGAIFLGFVAIIPTAVESAL-GVPTFRGLGATSLLILVG 413
Query: 425 SIIELRRSYQAY 436
I+ + Q Y
Sbjct: 414 VAIDTAKQVQTY 425
>gi|187934067|ref|YP_001884493.1| preprotein translocase subunit SecY [Clostridium botulinum B str.
Eklund 17B]
gi|187722220|gb|ACD23441.1| preprotein translocase, SecY subunit [Clostridium botulinum B str.
Eklund 17B]
Length = 426
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 217/443 (48%), Gaps = 43/443 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F SE+R++ F +L+ + RIG IP+PG I DYL +S S L
Sbjct: 1 MLQTLRNAFKVSELRKKFFWIILLVAVFRIGSHIPVPG-----INADYLKSISQSGGLLS 55
Query: 75 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
+ GA + S F LG+ P I ASI+MQ+L +P L QL KEG DG +KI++ +
Sbjct: 56 FYDLLSGGAFSRFSIFALGVMPYINASIIMQLLTVAIPQLEQLSKEGEDGRKKIQNATRY 115
Query: 130 ISLGFAILEAVIVACYSLPYSIYA------ASHSVK--HVMVTAFLLVCGAMTMSWICDT 181
+SLG + + L + IYA A+ +K ++V F LV G+ W+ D
Sbjct: 116 VSLGISFI---------LAFGIYATISNSGATAGIKTSEMLVIIFALVVGSTFCMWLGDQ 166
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
++ +G G G+S++I V I++ T+ + + +V + L F V + A+V
Sbjct: 167 LTVNGIGNGTSILIFVNIVSRIPMTMGSIAASKQAGNVS--IIEVALFAAF-FVALLAIV 223
Query: 242 V--TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
+ + R++ +QY G A + +IP +I S + ++ ++ FP
Sbjct: 224 LYFSLAERRIPVQYAG----KAVGGSKMMRNQTSHIPLSIIGSAVIAIIFAMSVMDFPRT 279
Query: 300 LASILGSPFWQHVKEILNPETSV-GARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYL 356
+A+ + + W IL +T V + W+Y +YA F F I P E+A+ L
Sbjct: 280 IATFVPNKSWAM--WILTNKTCVFNSESWMYIVLYAILTLFFTWFYTQITFKPDEMAENL 337
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
+K IP V+PG+AT Y +I GG+L +ILA + TI+ +Y N FS
Sbjct: 338 HKSTGFIPGVRPGEATTRYFERILNRVSVIGGILAAILAVTPTIVQNYTEFKNISFS--G 395
Query: 417 TSVLIIVGSIIELRRSYQAYNVM 439
T++LII+G ++ R ++ M
Sbjct: 396 TALLIIIGVALDFNRQVESQMTM 418
>gi|307244783|ref|ZP_07526884.1| preprotein translocase, SecY subunit [Peptostreptococcus stomatis
DSM 17678]
gi|306491881|gb|EFM63933.1| preprotein translocase, SecY subunit [Peptostreptococcus stomatis
DSM 17678]
Length = 422
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 205/431 (47%), Gaps = 29/431 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 85
+IR++L T +I++ R+G IP+PG + +I + + GA + F
Sbjct: 12 KDIRKKLLFTFFMIIVFRLGTTIPVPGINTSVIKNMVEKNSLLGLYNMFSGGAFSNFTIF 71
Query: 86 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACY 145
LGI P I ASI++Q+L SL +L+K G +G +KI Y +LG AI++AV
Sbjct: 72 ALGIGPYITASIIIQLLTAGFESLKELQKSGEEGKKKINKYTRMTTLGLAIIQAV----- 126
Query: 146 SLPYSIYAASHSVKH---VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
+ I ++ V + + LV +M + W+ D I+E G G GSS++I +GI++
Sbjct: 127 GITLGIVRSALKVNNPFFIFTVIITLVAASMMVMWLGDRITEKGLGNGSSVLIFIGIISR 186
Query: 203 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFKL 258
+ ++Q + + WP + + V I + E RK+ +QY G K+
Sbjct: 187 LPIDI-GAIAQRVNIGLLKWPAITIFIVVVLITITGVTFINESTRKIPVQYAKRVVGRKM 245
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
E S +IP +N SG+ P++ + +LA P +A + GS V N
Sbjct: 246 YGG--ESS-------HIPMKVNQSGVMPIIFASSILALPQTIALLGGSKMQAAVNAFFNL 296
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
T G W Y I + LF+ F I+ ++I + G IP ++PGK T YL
Sbjct: 297 STDKGF--WTYRIIEIVLIVLFSYFYNTISFNTEDITKNMKNSGGFIPGIRPGKPTENYL 354
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
I + G L ++A ++ HY+ +I F G TS+LIIVG +EL+R ++
Sbjct: 355 GGILSKLTIVGAAFLGLMAMIPALMTHYM-QIPMNF--GGTSLLIIVGVALELKRQLESN 411
Query: 437 NVMPSLSKALR 447
VM + L+
Sbjct: 412 LVMKNYQGFLK 422
>gi|443313550|ref|ZP_21043161.1| protein translocase subunit secY/sec61 alpha [Synechocystis sp. PCC
7509]
gi|442776493|gb|ELR86775.1| protein translocase subunit secY/sec61 alpha [Synechocystis sp. PCC
7509]
Length = 437
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 219/432 (50%), Gaps = 28/432 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVD 71
A E+F + + +R RLFVT +++++R+G F+P+PG +R Q + + G +D
Sbjct: 9 TAQETFMQMAQTAGLRGRLFVTIGILILARLGVFLPIPGINREQFTQAVQNNNAIIGFLD 68
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 130
G L F LGI P I ASI++Q+L +P+L L+K EG G KI ++
Sbjct: 69 IFSGGGLS-TLGIFALGILPYINASIIIQLLTAAIPALENLQKNEGEAGRRKISQITRYV 127
Query: 131 SLGFAILEAV-IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
S G+A+L+++ I A + P++I V+ TA L+ G+M + W + I+E G G
Sbjct: 128 SFGWAVLQSIFIAAIWVRPFAIVPGPA---FVVQTAIALIAGSMFIMWASELITERGVGN 184
Query: 190 GSSLIICVGILTGYTETLYKMLS--QLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G+SL+I V I+ ++L ++ Q G + +L L+ + TIV + V V E R
Sbjct: 185 GASLLIFVNIVAALPKSLGDTVTFAQTGGRAAVGRVVVLLLVFLVTIVGI--VFVQEASR 242
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
K+ + ++ +E E Y+P + G+ P++ + +L P+ LA+ G+
Sbjct: 243 KIPILSARRQVGRKVQE-----ERRSYLPLQLIQGGVMPIIFASSILILPAFLANATGNA 297
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIADYLNKMGARIP 364
++ N + G+ PW Y +Y + F+ F I N P +++ L KMGA IP
Sbjct: 298 TISNIAT--NYLSPGGSAPWAYALVYLVSIVFFSYFYASLIVN-PVDLSQNLKKMGASIP 354
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PGKAT EY+ + G L L +A T ++ + + +G TS+LI+VG
Sbjct: 355 GIRPGKATSEYVEGVLNRLTLLGALFLGTVAIIPTAVESAV-GVPTFRGLGATSLLILVG 413
Query: 425 SIIELRRSYQAY 436
I+ R + Y
Sbjct: 414 VAIDTARQVRTY 425
>gi|255081925|ref|XP_002508181.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226523457|gb|ACO69439.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 423
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 212/436 (48%), Gaps = 28/436 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVDELGDFGA 78
F S++ ++ +L+++SR+G +IP+ G DR + V G VD L G+
Sbjct: 2 NDFMNSKLPGKIGTVLLLLILSRVGTYIPISGVDRDAFAESLQGGGNVLGYVDTLTG-GS 60
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAIL 137
KL F LGI P I +SI+ Q+L + PSL +L+KE G G K + Y + +LGFA++
Sbjct: 61 ISKLGIFSLGIVPYINSSIIFQLLTSVFPSLKKLQKEEGEAGRRKFQQYQRYGALGFAVV 120
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+AV Y P+ ++ ++ ++ +L GAM + +I + ++E G G+SL+I
Sbjct: 121 QAVGQCLYVRPF---VEDFNLGWLVESSAVLTAGAMILLYIGEVLTELKLGNGTSLLIFT 177
Query: 198 GILTGYTETLYKMLSQL--LGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
I++ + + LSQ G + P G F + T+ V V E RK+ + Y
Sbjct: 178 NIISSLPSSFGQTLSQASEKGDAATVLPV---FFGAFFLTTLGIVYVQEAERKIPMNYST 234
Query: 256 -FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 314
F+ A+ Y+PF +N +G+ P++ + LLA P+ LA +P +
Sbjct: 235 RFQAGGLAKSS--------YLPFKVNSAGVMPIIFASSLLALPATLARFAPNPVIIGAAK 286
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
+ P V P V + FF + + + PK++AD L + GA IP V+PG AT
Sbjct: 287 AVYP-GGVAYVP-VNIALICFFNYFYTFLQLE--PKDVADQLKRQGASIPGVRPGAATSG 342
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELRRSY 433
Y+T++ G + L LA + T ++ GF+ TS+LI+VG + R
Sbjct: 343 YITRVLERLSILGSVFLGFLALAPTAVEGITGLTTFRGFA--GTSLLILVGVATDTTRKV 400
Query: 434 QAYNVMPSLSKALRRY 449
++ VM +L +
Sbjct: 401 RSEIVMSRYDTSLDDF 416
>gi|428220882|ref|YP_007105052.1| protein translocase subunit SecY [Synechococcus sp. PCC 7502]
gi|427994222|gb|AFY72917.1| protein translocase subunit secY/sec61 alpha [Synechococcus sp. PCC
7502]
Length = 434
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 213/440 (48%), Gaps = 48/440 (10%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 65
+A E+F + S +R RL VT ++++ R+G F+PLPG +R + + ++L
Sbjct: 10 SAQETFMQMAQASGLRGRLLVTIGMLILVRLGIFLPLPGINRAIFAEAVKNNSVVNFLDI 69
Query: 66 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 124
SG G L F LGI P I ASI+MQ++ +P+L L+K EG G KI
Sbjct: 70 FSG--------GGLSALGIFALGIIPYINASIIMQLMTTALPTLENLQKNEGEAGRRKIS 121
Query: 125 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
Y +++LG+A+L++ ++ + + + + + + T L G+M + W + ++E
Sbjct: 122 QYTRYVALGWALLQSFGISIW-VQGTGAVVNPGIGFSLETMVALTAGSMFVMWAGELVTE 180
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G G+SL+I V I++G +L ++ S R +L LL +F ++ + V V E
Sbjct: 181 RGVGNGASLLIFVSIVSGLPRSLGSTIALAQADSSRVGGVLL-LLSIFLVMIVCIVFVQE 239
Query: 245 GCRKVKL----QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
G R++ + + G KL RE S Y+P +N G+ P++ + +L PS +
Sbjct: 240 GTRRIPIISARRQVGRKLY---REQSS------YLPLKLNQGGVMPIIFASSVLILPSFI 290
Query: 301 ASILGS-PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYL 356
S V L P T W Y Y + F+ F I N P +++ L
Sbjct: 291 GQTFASNQIVASVTSFLAPNT------WGYVLFYLVLILGFSYFYSSLIVN-PVDMSQNL 343
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
KMG+ +P ++PG AT YLTK+ G + L +A T ++ + IG
Sbjct: 344 KKMGSSVPGIRPGTATSTYLTKVLNRLTLLGAIFLGAVAIIPTAVERA-TGVATFSGIGA 402
Query: 417 TSVLIIVGSIIELRRSYQAY 436
T++LI+VG IE + Q Y
Sbjct: 403 TTLLILVGVAIETSKQIQTY 422
>gi|260914660|ref|ZP_05921126.1| preprotein translocase [Pasteurella dagmatis ATCC 43325]
gi|260631259|gb|EEX49444.1| preprotein translocase [Pasteurella dagmatis ATCC 43325]
Length = 441
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 210/434 (48%), Gaps = 28/434 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
E++ RL + +++ RIG FIP+PG D ++ Q +D F GA + S
Sbjct: 17 GELKNRLLFVLIALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRAS 76
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A L+AV +A
Sbjct: 77 IFALGIMPYISASIIIQLLTTVHPALAELKKEGETGRRKISKYTRYSTLVLATLQAVGIA 136
Query: 144 CYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
LP + + + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 137 T-GLPNMLPGLVPNLDIWFYITAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 195
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + + Q + P +L L+ V VT + V V G R++K++Y A
Sbjct: 196 GLPSAIGQTIEQ--ARQGQMHPLVLLLIAVIVFAVTYFVVFVERGQRRIKVEY-----AK 248
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 316
+ + ++P +N +G+ P + + ++ FP+ LA LG + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLAQWLGEGSSLEWLTDLSMLL 308
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
+P +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 309 HP-----GQP-LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSR 362
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ KI GGL ++ + ++ N F G TS+LI+V I++ Q
Sbjct: 363 YIDKIMTRLTLIGGLYITFVCLVPYVMTSAW---NVQFYFGGTSLLIVVVVIMDFIAQVQ 419
Query: 435 AYNVMPSLSKALRR 448
++ + AL++
Sbjct: 420 SHLMSTKYESALKK 433
>gi|428205249|ref|YP_007089602.1| protein translocase subunit SecY [Chroococcidiopsis thermalis PCC
7203]
gi|428007170|gb|AFY85733.1| protein translocase subunit secY/sec61 alpha [Chroococcidiopsis
thermalis PCC 7203]
Length = 435
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 220/432 (50%), Gaps = 29/432 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL--SFVSGSVD 71
A E+F + + +R RL VT +++++R+G F+P+PG +R Q S V G +D
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTIGMLILARLGVFLPVPGINREQFAQSVQNNSAVIGFLD 68
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 130
G L F LGI P I ASI++Q+L +P+L L+K EG G +I ++
Sbjct: 69 IFSGGGLS-TLGVFALGILPYINASIIIQLLTAAIPALENLQKNEGEAGRRQISQVTRYV 127
Query: 131 SLGFAILEAV-IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+LG+AIL++ I A + P+++ + V+ TA L G+M + W + I+E G G
Sbjct: 128 ALGWAILQSTFIAAIWIRPFAL---NPGPVFVIETAIALTAGSMFVMWASELITERGVGN 184
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
G+SL+I V I+ ++L ++ ++ LL VF ++ + V V EG R++
Sbjct: 185 GASLLIFVNIVASLPKSLGDTITLAQTGGRETIGRVIVLLLVFLVMIVGIVFVQEGTRRI 244
Query: 250 KLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
+ SA R+ E Y+P +N G+ P++ + +L P+ LA +
Sbjct: 245 PI-------ISARRQVGRKLYLERSSYLPLRLNQGGVMPIIFASAVLILPASLARFTQNE 297
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIADYLNKMGARIP 364
+ ++ ++P G+ PW+Y +Y + F+ F I N P ++A L KMG+ IP
Sbjct: 298 YVINISNAISPG---GSTPWLYALVYFVMIVFFSYFYSTLIVN-PVDLAQNLKKMGSSIP 353
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PGKAT EY+ ++ F G + L +A T ++ R+ +G TS+LI+VG
Sbjct: 354 GIRPGKATSEYVERVLNRLTFLGAVFLGAVAIIPTAVESA-TRVPTFQGLGATSLLILVG 412
Query: 425 SIIELRRSYQAY 436
I+ + Q Y
Sbjct: 413 VAIDTAKQIQTY 424
>gi|345303858|ref|YP_004825760.1| preprotein translocase subunit SecY [Rhodothermus marinus
SG0.5JP17-172]
gi|345113091|gb|AEN73923.1| preprotein translocase, SecY subunit [Rhodothermus marinus
SG0.5JP17-172]
Length = 438
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 218/428 (50%), Gaps = 35/428 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
E+R+R+ T L+V+ R+G ++ LPG D ++ + + ++ L D GA +
Sbjct: 15 EELRQRVLYTLGLLVVYRLGTYVTLPGVDAHILAEVNRQAGTNNLFGLIDLFVGGAFSQA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
F LGI P I ASI++Q++ +VP +L++EG +G KI ++++G L+AV
Sbjct: 75 GIFALGIMPYITASIIIQLMGAVVPYFQKLQREGEEGRRKITQLTRYLTVGITALQAVGY 134
Query: 143 ACYSLPYSIYAASHSVK---HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
A +L Y + V +++ +L G + + W+ + I+E+G G G SLII V I
Sbjct: 135 AI-NLRYGATGQAIVVSPAFFMLIAVIVLTAGTVFVMWLGERITENGIGNGISLIIMVSI 193
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
+ + +Y +++ F++ L L VF ++T V+VT+G R++ +QY K
Sbjct: 194 IAFLPQAVYNEF------TLKDNLFIVLLELAVFVVITAGVVLVTQGTRRIPVQYA--KR 245
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILN 317
R +T+ Y+P +N +G+ P++ ++ P+ +A+ GS F Q +
Sbjct: 246 VVGRRVYGGVTQ---YLPLRVNAAGVMPIIFAQSIMFVPATIATFFPGSDFMQQFGSFFS 302
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEY 375
+ W Y +++ V F F IA P+E+AD L + G IP V+PGK T E+
Sbjct: 303 DISG-----WGYSSLFFLLVVFFTYFYTAIAVNPREMADTLKRQGGFIPGVRPGKQTSEF 357
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLRR--INEGFS--IGFTSVLIIVGSIIELRR 431
+ I G + L I+A I+ + R + GF+ G TS+LIIVG +++ +
Sbjct: 358 IDTILTRITLPGAIFLGIVA----IIPAFAMRAGVTAGFAHFFGGTSLLIIVGVMLDTLQ 413
Query: 432 SYQAYNVM 439
+++ +M
Sbjct: 414 QIESHLLM 421
>gi|255081923|ref|XP_002508180.1| SecY protein [Micromonas sp. RCC299]
gi|226523456|gb|ACO69438.1| SecY protein [Micromonas sp. RCC299]
Length = 487
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 212/436 (48%), Gaps = 28/436 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF--VSGSVDELGDFGA 78
F S++ ++ +L+++SR+G +IP+ G DR + V G VD L G+
Sbjct: 66 NDFMNSKLPGKIGTVLLLLILSRVGTYIPISGVDRDAFAESLQGGGNVLGYVDTL-TGGS 124
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAIL 137
KL F LGI P I +SI+ Q+L + PSL +L+KE G G K + Y + +LGFA++
Sbjct: 125 ISKLGIFSLGIVPYINSSIIFQLLTSVFPSLKKLQKEEGEAGRRKFQQYQRYGALGFAVV 184
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+AV Y P+ ++ ++ ++ +L GAM + +I + ++E G G+SL+I
Sbjct: 185 QAVGQCLYVRPF---VEDFNLGWLVESSAVLTAGAMILLYIGEVLTELKLGNGTSLLIFT 241
Query: 198 GILTGYTETLYKMLSQL--LGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
I++ + + LSQ G + P G F + T+ V V E RK+ + Y
Sbjct: 242 NIISSLPSSFGQTLSQASEKGDAATVLPV---FFGAFFLTTLGIVYVQEAERKIPMNYST 298
Query: 256 -FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 314
F+ A+ Y+PF +N +G+ P++ + LLA P+ LA +P +
Sbjct: 299 RFQAGGLAKSS--------YLPFKVNSAGVMPIIFASSLLALPATLARFAPNPVIIGAAK 350
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
+ P V P V + FF + + + PK++AD L + GA IP V+PG AT
Sbjct: 351 AVYP-GGVAYVP-VNIALICFFNYFYTFLQLE--PKDVADQLKRQGASIPGVRPGAATSG 406
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELRRSY 433
Y+T++ G + L LA + T ++ GF+ TS+LI+VG + R
Sbjct: 407 YITRVLERLSILGSVFLGFLALAPTAVEGITGLTTFRGFA--GTSLLILVGVATDTTRKV 464
Query: 434 QAYNVMPSLSKALRRY 449
++ VM +L +
Sbjct: 465 RSEIVMSRYDTSLDDF 480
>gi|197122359|ref|YP_002134310.1| preprotein translocase subunit SecY [Anaeromyxobacter sp. K]
gi|196172208|gb|ACG73181.1| preprotein translocase, SecY subunit [Anaeromyxobacter sp. K]
Length = 447
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 211/440 (47%), Gaps = 47/440 (10%)
Query: 19 AAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
AA F +E+R+RL T ++ + R+G F+ PG DRR + QD ++ GS+ L
Sbjct: 3 AASGLFNIFRIAELRKRLVFTLGMLAVYRLGIFVTTPGVDRRAM-QDVVA-QQGSLLGLL 60
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+F GA +LS F LGI P + ASI++Q+L +VPSL +++KEG G KI Y + +
Sbjct: 61 NFFSGGAFEQLSIFALGIMPYVSASIILQLLTVVVPSLEKMQKEGELGRRKITQYTRYGT 120
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHV--------MVTAFLLVCGAMTMSWICDTIS 183
+ + ++ +A Y A + V V ++T L G + W+ + I+
Sbjct: 121 VILSAIQGYGIATY---LESLRAGNGVAVVGDPGWGFRLLTMVSLAAGTAFIMWMGEQIT 177
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 243
E G G G SLII GI+ +Y + QL S + L +L +V + A+V
Sbjct: 178 ERGVGNGISLIIFAGIVARIPAAIYTTVRQLGASGSQLSALGLLVLTALMVVVIGAIVYV 237
Query: 244 E-GCRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 298
E G R++ +QY G KL ++P +N SG+ P + + LL P+
Sbjct: 238 ERGQRRIPIQYAKRMVGRKLYGGQ---------STHLPLKVNTSGVIPPIFASSLLLLPA 288
Query: 299 ILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYL 356
+A PF Q + ++ A W+Y TIY + F F A P ++AD L
Sbjct: 289 TMAGWF--PFLQRMSN------AIQAGSWIYNTIYVALIIFFAYFYTAVTFNPVDVADNL 340
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++PGK T +Y+ + + F G + L+ + TI+ + F G
Sbjct: 341 KKYGGYIPGIRPGKKTADYIDFVLSRITFGGAIYLAAICVLPTIITN---EFGVNFYFGG 397
Query: 417 TSVLIIVGSIIELRRSYQAY 436
TS+LI+VG ++ + + +
Sbjct: 398 TSLLIVVGVALDTVQQIEGH 417
>gi|374992999|ref|YP_004968498.1| preprotein translocase subunit SecY [Desulfosporosinus orientis DSM
765]
gi|357211365|gb|AET65983.1| preprotein translocase, SecY subunit [Desulfosporosinus orientis
DSM 765]
Length = 428
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 214/437 (48%), Gaps = 49/437 (11%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFVSGSVDELGDFG 77
E+R+++ T ++ +I RIG IP P DR + Q ++++ +SG G
Sbjct: 13 GELRKKIGYTLLMFLIFRIGAHIPTPYIDRDTLNQMLGSGAIMNFMNTISG--------G 64
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
+ LS F L I+P I ASI++Q+L ++PSL +L KEG G +KI Y + ++G
Sbjct: 65 SFKSLSVFALSITPYITASIILQLLTIVIPSLERLSKEGDFGRKKITQYTRYSTVGLGFF 124
Query: 138 EAVIVACYSLPYSIYAA----SHSVK--HVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+A + L Y I AA + ++K ++ A +L G + W+ + I+E G G G
Sbjct: 125 QA-----FGLTYGIRAAVLVPTPAMKWPTYLLIAIVLTAGTSFLMWLGEAITEKGIGNGI 179
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SLII GI++ + + L + ++GL+ + VT + V EG R+V +
Sbjct: 180 SLIIFAGIVSRIPTAMTSLWDMLRVGEINSLT-IIGLVLIVIFVTAGVIYVQEGQRRVTV 238
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQ 310
QY A +IP +N +G+ PV+ LLAFP +AS + S F Q
Sbjct: 239 QY-----AKRVVGRRVYGGQSSHIPLKVNQAGVIPVIFAISLLAFPQTIASWMPTSAFAQ 293
Query: 311 HVKEILNPETSVGARPW--VYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKP 368
V + + S+ + P+ VY + FF + + I P ++AD L K G IP ++P
Sbjct: 294 FVSKWFSMNGSITSIPYMLVYGALIIFFTYFYT--AITFNPVDVADNLKKYGGFIPGLRP 351
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G+ T EYLTK+ GG+ L+++A T++ N F G TS+LI+VG ++
Sbjct: 352 GRPTAEYLTKVLNRITLAGGIFLALIAVLPTLVIGVTGLKNIYF--GGTSLLIVVGVALD 409
Query: 429 ---------LRRSYQAY 436
+ R YQ +
Sbjct: 410 TMKQIESQLMSRHYQGF 426
>gi|270284454|ref|ZP_05966143.2| preprotein translocase, SecY subunit [Bifidobacterium gallicum DSM
20093]
gi|270276914|gb|EFA22768.1| preprotein translocase, SecY subunit [Bifidobacterium gallicum DSM
20093]
Length = 461
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 212/429 (49%), Gaps = 24/429 (5%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++F E+R ++ +I+I RIG FIP PG D +++ + + + + +G
Sbjct: 19 QAFRTKELRNKILFVLGIIIIYRIGSFIPTPGVDEKVVHDCVANTTNNAENFIGLVNLFS 78
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 79 GGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGLA 138
Query: 136 ILEA--VIVACYSLPYSIYAASH-----SVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+L++ +IV S Y S SV +++V ++ G + W+ + I++ G G
Sbjct: 139 VLQSTTIIVTARSGALFNYQCSQVIPDGSVWNLIVMILIMTGGTGLIMWMAELITDKGIG 198
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
QG S++I + I +G+ L+++ G++ W+ F + + GV ++ ++ V V R+
Sbjct: 199 QGMSILIFLSICSGFLPQLWQIGWGTNGTNGDWFKFGV-VTGVLLVIMIFVVYVELSQRR 257
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY + S Y+P +N SG+ P + + +LA P+++A G+
Sbjct: 258 IPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAIPTLIAQ-FGNAE 311
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNV 366
VK I N + W Y +YA + F F +I P E AD + + G IP +
Sbjct: 312 QSWVKWI-NSNLANTTSVW-YIVLYALMIVFFCFFYTEITFNPDETADNMKQYGGFIPGI 369
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+ G AT YL + G + L +A T+L L ++N G T++LII G
Sbjct: 370 RAGNATARYLKYVINRLNTVGAVYLLFVALIPTVLIMAL-KLNTALPFGGTTILIIAGVG 428
Query: 427 IELRRSYQA 435
++ R +A
Sbjct: 429 LDTLRQAKA 437
>gi|440683424|ref|YP_007158219.1| protein translocase subunit secY/sec61 alpha [Anabaena cylindrica
PCC 7122]
gi|428680543|gb|AFZ59309.1| protein translocase subunit secY/sec61 alpha [Anabaena cylindrica
PCC 7122]
Length = 437
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 220/434 (50%), Gaps = 32/434 (7%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL VT ++++ R+G F+P+PG +R + +SG+
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPIPGINR----VRFAEAISGNNSVF 64
Query: 74 GDF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 127
G G L L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 65 GLLDIFSGRGLSTLGIFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQIT 124
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
++++G+AI+++V A +L +A + V TA L G+M + W + I+E G
Sbjct: 125 RYVTVGWAIIQSV--AFSALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGI 182
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G G+SL+I V I+ ++L + + ++ L+ VF + + V V EG R
Sbjct: 183 GNGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFLLTIVGIVFVQEGLR 242
Query: 248 KVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
++ + SA R+ + E Y+P +N G+ P++ +L+ P ++A+
Sbjct: 243 RIPI-------ISARRQVGRRVLAEQRSYLPLRLNSGGVMPIIFAAAILSLPLLIANFTK 295
Query: 306 SPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGAR 362
+P + V L+P G+ PWVY +Y + F+ F + P ++A L KMG+
Sbjct: 296 NPDLANIVNTYLSPS---GSAPWVYALVYLTSIVFFSYFYSSLILNPVDVAQNLKKMGSS 352
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++PGKAT EY+ ++ F G + L ++A T ++ L ++ +G TS+LI+
Sbjct: 353 IPGIRPGKATSEYIERVANRLTFLGAIFLGLVAIIPTAVESAL-KVPTFKGLGATSLLIL 411
Query: 423 VGSIIELRRSYQAY 436
VG I+ + Q Y
Sbjct: 412 VGVAIDTAKQIQTY 425
>gi|418327360|ref|ZP_12938521.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
14.1.R1.SE]
gi|365233091|gb|EHM74058.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
14.1.R1.SE]
Length = 430
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 210/423 (49%), Gaps = 24/423 (5%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--AEL 80
F E+R ++F T ++VI +IG +IP PG + S G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS--QGATELLNTFGGGALK 66
Query: 81 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +++
Sbjct: 67 RFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFIQS 126
Query: 140 VIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 127 IGMAFQFNNYLKGQLIIEQSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFA 186
Query: 198 GILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +QY
Sbjct: 187 GILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPIQY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QHV 312
K SA R S T Y+P +N +G+ PV+ P L W Q++
Sbjct: 246 A--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNI 299
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+I NP +++G +Y + F + + + P+++AD L K G+ +P ++PG+ T
Sbjct: 300 ADIANPSSNIGM--IIYVVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGEQT 355
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+Y+T++ F G + L+ +A I ++ + + IG TS+LI++G IE ++
Sbjct: 356 KKYITRVLYRLTFVGSIFLAAIAILPIIATKFM-GLPQSIQIGGTSLLIVIGVAIETMKT 414
Query: 433 YQA 435
+A
Sbjct: 415 LEA 417
>gi|86158349|ref|YP_465134.1| preprotein translocase subunit SecY [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774860|gb|ABC81697.1| protein translocase subunit secY/sec61 alpha [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 447
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 212/440 (48%), Gaps = 47/440 (10%)
Query: 19 AAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
AA F +E+R+RLF T ++ + R+G F+ PG DRR + QD ++ GS+ L
Sbjct: 3 AASGLFNIFRIAELRKRLFFTLGMLAVYRLGIFVTTPGVDRRAM-QDVVA-QQGSLLGLL 60
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+F GA +LS F LGI P + +SI++Q+L +VPSL +++KEG G KI Y + +
Sbjct: 61 NFFSGGAFEQLSIFALGIMPYVSSSIILQLLTVVVPSLEKMQKEGELGRRKITQYTRYGT 120
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHV--------MVTAFLLVCGAMTMSWICDTIS 183
+ + ++ +A Y A + V V ++T L G + W+ + I+
Sbjct: 121 VVLSAIQGYGIATY---LESLRAGNGVAVVGEPGWGFRLLTMVSLAAGTAFIMWMGEQIT 177
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 243
E G G G SLII GI+ +Y + QL S + L +L +V + A+V
Sbjct: 178 ERGVGNGISLIIFAGIVARVPAAIYTTVRQLGASGSQLTGLGLLVLTALMVVVIGAIVYV 237
Query: 244 E-GCRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 298
E G R++ +QY G KL ++P +N SG+ P + + LL P+
Sbjct: 238 ERGQRRIPIQYAKRMVGRKLYGGQ---------STHLPLKVNTSGVIPPIFASSLLLLPA 288
Query: 299 ILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYL 356
LA PF Q + ++ A W+Y TIY + F F A P ++AD L
Sbjct: 289 TLAGWF--PFLQRMSN------AIQAGSWIYNTIYVALIIFFAYFYTAVTFNPVDVADNL 340
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++PGK T +Y+ + + F G + L+ + TI+ + F G
Sbjct: 341 KKYGGYIPGIRPGKKTADYIDFVLSRITFGGAIYLAAICVLPTIITN---EFGVNFYFGG 397
Query: 417 TSVLIIVGSIIELRRSYQAY 436
TS+LI+VG ++ + + +
Sbjct: 398 TSLLIVVGVALDTVQQIEGH 417
>gi|220917141|ref|YP_002492445.1| preprotein translocase subunit SecY [Anaeromyxobacter dehalogenans
2CP-1]
gi|219954995|gb|ACL65379.1| preprotein translocase, SecY subunit [Anaeromyxobacter dehalogenans
2CP-1]
Length = 447
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 211/440 (47%), Gaps = 47/440 (10%)
Query: 19 AAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
AA F +E+R+RL T ++ + R+G F+ PG DRR + QD ++ GS+ L
Sbjct: 3 AASGLFNIFRIAELRKRLVFTLGMLAVYRLGIFVTTPGVDRRAM-QDVVA-QQGSLLGLL 60
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+F GA +LS F LGI P + ASI++Q+L +VPSL +++KEG G KI Y + +
Sbjct: 61 NFFSGGAFEQLSIFALGIMPYVSASIILQLLTVVVPSLEKMQKEGELGRRKITQYTRYGT 120
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHV--------MVTAFLLVCGAMTMSWICDTIS 183
+ + ++ +A Y A + V V ++T L G + W+ + I+
Sbjct: 121 VILSAIQGYGIATY---LESLRAGNGVAVVGDPGWGFRLLTMVSLAAGTAFIMWMGEQIT 177
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 243
E G G G SLII GI+ +Y + QL S + L +L +V + A+V
Sbjct: 178 ERGVGNGISLIIFAGIVARVPAAIYTTVRQLGASGSQLSGLGLLVLTALMVVVIGAIVYV 237
Query: 244 E-GCRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 298
E G R++ +QY G KL ++P +N SG+ P + + LL P+
Sbjct: 238 ERGQRRIPIQYAKRMVGRKLYGGQ---------STHLPLKVNTSGVIPPIFASSLLLLPA 288
Query: 299 ILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYL 356
+A PF Q + ++ A W+Y TIY + F F A P ++AD L
Sbjct: 289 TMAGWF--PFLQRMSN------AIQAGSWIYNTIYVALIIFFAYFYTAVTFNPVDVADNL 340
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++PGK T +Y+ + + F G + L+ + TI+ + F G
Sbjct: 341 KKYGGYIPGIRPGKKTADYIDFVLSRITFGGAIYLAAICVLPTIITN---EFGVNFYFGG 397
Query: 417 TSVLIIVGSIIELRRSYQAY 436
TS+LI+VG ++ + + +
Sbjct: 398 TSLLIVVGVALDTVQQIEGH 417
>gi|313140885|ref|ZP_07803078.1| preprotein translocase SecY subunit [Bifidobacterium bifidum NCIMB
41171]
gi|313133395|gb|EFR51012.1| preprotein translocase SecY subunit [Bifidobacterium bifidum NCIMB
41171]
Length = 444
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 212/432 (49%), Gaps = 30/432 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 74
++F E+R ++ T +I+I RIG FIP PG + + + QD ++ +SGS + L
Sbjct: 6 QAFRTKELRNKILFTLAMIIIYRIGSFIPTPGVNYKTV-QDCINTLSGSQENFIGLANLF 64
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 65 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 124
Query: 135 AILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
A+L++ + + +++ +SV ++ V ++ G + W+ + I++ G
Sbjct: 125 AVLQSTTILVTAQSGALFNNMCSSPIPDNSVWNLSVMVLIMTGGTGLIMWMAELITDKGI 184
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
GQG S++I + I +G+ L+++ G++ W F + + GV ++ ++ V R
Sbjct: 185 GQGMSILIFMSICSGFLPQLWEIGWGTNGTNGDWLKFGI-VTGVLVVILVFVDFVELSQR 243
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI--LG 305
++ +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RIPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQFGKSG 298
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARI 363
+ + + L TSV W Y +YA + F F I P E AD + + G I
Sbjct: 299 QSWVDWINKNLANTTSV----W-YIALYALMIVFFCFFYTSITFNPDETADNMKEYGGFI 353
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++ G AT YL + G + L +A T+L L +N G T++LII
Sbjct: 354 PGIRAGNATSRYLNYVMNRLNTVGAVYLLFVALIPTVLIMAL-NLNSKLPFGGTTILIIA 412
Query: 424 GSIIELRRSYQA 435
G ++ R +A
Sbjct: 413 GVGLDTLRQAKA 424
>gi|238916285|ref|YP_002929802.1| preprotein translocase subunit SecY [Eubacterium eligens ATCC
27750]
gi|238871645|gb|ACR71355.1| preprotein translocase SecY subunit [Eubacterium eligens ATCC
27750]
Length = 439
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 209/434 (48%), Gaps = 35/434 (8%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAE 79
+F +IR+++ T +++V+ R+G +P+PG D +G + L F G+
Sbjct: 8 AFKNKDIRKKIIYTLLILVVVRVGSLLPIPGVDTNYFSSLLSGINTGDLSYLSAFTGGSF 67
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
++S F L I+P I +SI+MQ+L +P L +++KEG DG +KI S ++++G +++E+
Sbjct: 68 ERMSLFALSITPYITSSIIMQLLTIAIPKLEEMQKEGEDGRKKIASITRYVTIGLSLIES 127
Query: 140 VIVACYSLPYSIYAAS------HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
+ +A + S H V ++V L G+ + W+ + I+E G G G S+
Sbjct: 128 IAMAVGFGRTGLIKDSAQLSTLHYVVCIIVVVAALTAGSAVLMWLGERITEKGVGNGISI 187
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRKVKL 251
++ + I++G + S + + +L + ++ + + +G R++ +
Sbjct: 188 VLLINIISGMPSDFATLYSTFVAPKTPAKGVLAAVIILAILIVMVVLVCFLQDGERRIPV 247
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------ 305
QY + + IP +N +G+ P++ + L+ FP I+A + G
Sbjct: 248 QY-----SQKVSGRRTVGGQSTNIPLKVNTAGVMPIIFASSLMQFPVIIAQLFGKSYEWT 302
Query: 306 ----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGA 361
S +W V+ P+ S+G VY + F + + I P E+AD L K G
Sbjct: 303 RYLSSSYWCRVEA---PKYSIGL--LVYIVLLIIFAYFYT--SITFNPIEVADNLKKAGG 355
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
IP + PGK+T EYL KI F G + L I+A + + N S G TS++I
Sbjct: 356 VIPGITPGKSTSEYLNKILNYIVFIGAVGLLIIALIPIMCTGFF---NASVSFGGTSIII 412
Query: 422 IVGSIIELRRSYQA 435
IVG ++E + ++
Sbjct: 413 IVGVVLETLKQIES 426
>gi|311064877|ref|YP_003971603.1| protein translocase subunit SecY [Bifidobacterium bifidum PRL2010]
gi|390937431|ref|YP_006394990.1| pre protein translocase subunit [Bifidobacterium bifidum BGN4]
gi|421733538|ref|ZP_16172642.1| preprotein translocase subunit SecY [Bifidobacterium bifidum LMG
13195]
gi|421735492|ref|ZP_16174416.1| preprotein translocase subunit SecY [Bifidobacterium bifidum IPLA
20015]
gi|310867197|gb|ADP36566.1| SecY Protein translocase subunit [Bifidobacterium bifidum PRL2010]
gi|389891044|gb|AFL05111.1| pre protein translocase subunit [Bifidobacterium bifidum BGN4]
gi|407078574|gb|EKE51376.1| preprotein translocase subunit SecY [Bifidobacterium bifidum LMG
13195]
gi|407297225|gb|EKF16683.1| preprotein translocase subunit SecY [Bifidobacterium bifidum IPLA
20015]
Length = 444
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 212/432 (49%), Gaps = 30/432 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 74
++F E+R ++ T +I+I RIG FIP PG + + + QD ++ +SGS + L
Sbjct: 6 QAFRTKELRNKILFTLAMIIIYRIGSFIPTPGVNYKTV-QDCINTLSGSQENFIGLVNLF 64
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 65 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 124
Query: 135 AILEAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
A+L++ + + +++ +SV ++ V ++ G + W+ + I++ G
Sbjct: 125 AVLQSTTILVTAQSGALFNNMCSSPIPDNSVWNLSVMVLIMTGGTGLIMWMAELITDKGI 184
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
GQG S++I + I +G+ L+++ G++ W F + + GV ++ ++ V R
Sbjct: 185 GQGMSILIFMSICSGFLPQLWEIGWGTNGTNGDWLKFGI-VTGVLVVILVFVDFVELSQR 243
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI--LG 305
++ +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RIPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQFGKSG 298
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARI 363
+ + + L TSV W Y +YA + F F I P E AD + + G I
Sbjct: 299 QSWVDWINKNLANTTSV----W-YIALYALMIVFFCFFYTSITFNPDETADNMKEYGGFI 353
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++ G AT YL + G + L +A T+L L +N G T++LII
Sbjct: 354 PGIRAGNATSRYLNYVMNRLNTVGAVYLLFVALIPTVLIMAL-NLNSKLPFGGTTILIIA 412
Query: 424 GSIIELRRSYQA 435
G ++ R +A
Sbjct: 413 GVGLDTLRQAKA 424
>gi|320526888|ref|ZP_08028078.1| preprotein translocase, SecY subunit [Solobacterium moorei F0204]
gi|320132856|gb|EFW25396.1| preprotein translocase, SecY subunit [Solobacterium moorei F0204]
Length = 427
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 212/422 (50%), Gaps = 35/422 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAEL 80
S FK+ E R R+F T +++I R+G +P+PG + + Q + S+ + GA
Sbjct: 7 SLFKNKETRNRIFFTLAMLLIYRVGAALPVPGVNTETLAQSLANNSLLSIMNMLGGGALE 66
Query: 81 KLSFFQLGISPQIVASILMQVLC-HIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+LS F +G++P I ASI++Q+L ++PSL ++ K G G KI+ ++ + A ++A
Sbjct: 67 RLSIFAMGVTPYITASIIIQLLSMDVIPSLTEMTKSGQTGRMKIERITRYLGVVLAFVQA 126
Query: 140 VIVACYSLPYSI-----YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
YSL Y + ++ + TA ++ G+M + WI D IS G G G S+I
Sbjct: 127 -----YSLVYGFDKQYRVLTNANLSGYLYTATVMTAGSMFLIWIGDRISMKGIGNGLSII 181
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLG------VFTIVTMWAVVVTEGCRK 248
I GI++ ++ L G + + F G+L ++ V ++ +++ RK
Sbjct: 182 IFAGIVSNMPAAFMQVYQILAGGTTQGELFN-GILQFALYCVLYLTVVVFVIIMETAVRK 240
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY +SAAR S IT ++P IN + + PV+ ++ P I+ S + +
Sbjct: 241 IPIQYTN---SSAARSGSDIT----FLPLKINSASVIPVIFAQSIMMVPQIVISFINTDL 293
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNV 366
+ + + L+ T G +YA LF F D+ P+++A+ L K GA IP +
Sbjct: 294 YNKLSQWLSLSTPTG------LGLYALLTILFTFFYTDLQVDPEKVAENLGKSGAYIPGI 347
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PG T YL K+ G + L+++A +L + +++ ++G T ++I+VG
Sbjct: 348 RPGNETKTYLHKVLNRITVLGAIGLTLIAVVPYLLTMF-TSLSQATAVGGTGIIIVVGVA 406
Query: 427 IE 428
+E
Sbjct: 407 ME 408
>gi|345858444|ref|ZP_08810837.1| preprotein translocase, SecY subunit [Desulfosporosinus sp. OT]
gi|344328463|gb|EGW39848.1| preprotein translocase, SecY subunit [Desulfosporosinus sp. OT]
Length = 428
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 222/449 (49%), Gaps = 51/449 (11%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFV 66
++++ ++ +++R+++ T ++ +I RIG IP+P D + + D++ +
Sbjct: 2 IVDSLKNAWNVADLRKKIGYTLLMFLIFRIGAHIPIPFIDHDTLKKMLGTGGMFDFMDTL 61
Query: 67 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 126
SG G+ +LS F L I+P + ASI++Q+L ++PSL +L KEG G +KI Y
Sbjct: 62 SG--------GSFKRLSVFALSITPYVTASIILQLLTIVIPSLERLSKEGDYGRKKITQY 113
Query: 127 IWWISLGFAILEAVIVACYSLPYSIYAA----SHSVKH--VMVTAFLLVCGAMTMSWICD 180
+ ++G ++A + L Y + A S ++K ++ A +L G + W+ +
Sbjct: 114 TRYSTVGLGFIQA-----FGLTYGVRGALNIPSPALKWPIYLLVALVLTAGTAFLMWLGE 168
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWA 239
I+E G G G SLII GI++ + + + + L + + + L LL VF +T
Sbjct: 169 AITEKGIGNGISLIIFAGIVSRVPDAIKSLWNMLRVGEINAFSVIGLALLVVF--ITAGV 226
Query: 240 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
+ V EG R+V +QY A +IP +N +G+ PV+ LLAFP
Sbjct: 227 IYVQEGTRRVSVQY-----AKRVVGRRVYGGQSSHIPLKVNQAGVIPVIFAISLLAFPQT 281
Query: 300 LAS-ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYL 356
+A+ I S F + V + S+ + P Y +Y + F F A P ++AD L
Sbjct: 282 IATWIPTSAFARFVNTWFSMNGSITSIP--YLLVYGVLIIFFTYFYTAVTFNPVDVADNL 339
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++PG+ T EYL+KI + GGL L+++A T++ N F G
Sbjct: 340 KKYGGFIPGLRPGRPTAEYLSKILSRITLAGGLFLALIAVLPTLVIGLTGLKNIYF--GG 397
Query: 417 TSVLIIVGSIIE---------LRRSYQAY 436
TS+LI+VG +E + R YQ +
Sbjct: 398 TSLLIVVGVALETMKQIESQLMSRHYQGF 426
>gi|212697274|ref|ZP_03305402.1| hypothetical protein ANHYDRO_01842 [Anaerococcus hydrogenalis DSM
7454]
gi|212675723|gb|EEB35330.1| hypothetical protein ANHYDRO_01842 [Anaerococcus hydrogenalis DSM
7454]
Length = 423
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 213/441 (48%), Gaps = 25/441 (5%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ ++ + EIR++ + T V+++I R+G IP+P D + + Y VD L
Sbjct: 1 MLDTLKRAWGEEEIRKKFYFTLVMLLIYRLGNNIPIPFIDAQKLAAAYKGMEGTLVDYLN 60
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G LS F LG+ P I ASI+MQ+L ++P +L KEG G + I+ Y ++++
Sbjct: 61 MLTGGGLSTLSIFALGVQPYITASIVMQLLTVVIPRFEELTKEGEAGRKTIQKYTRYMTI 120
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
AI +A +A + Y +S + +V +L+ G M ++W+ +TI+E G G G S
Sbjct: 121 FLAIFQA--IAITNGLYGAALSSATPFQKLVMNVVLIGGTMLVTWMGETITEKGIGNGVS 178
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
+II +GI+ +TL + L +++ W ++ + V + ++ V +TEG RK+ +Q
Sbjct: 179 IIIFMGIIANVPKTLKTWKTGLHYNTISWLSILV-MAIVVIFIVVFTVRITEGERKIPVQ 237
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
Y A +IP +N SG+ P++ + +LA PS + S F
Sbjct: 238 Y-----AKRVVGRKMYGGQSTHIPVKVNMSGVMPIIFASAVLAIPSTI-----SLFMGRA 287
Query: 313 KEILNPETSVGARPWVYYTIYA-----FFVFLFNIFDIANLPKEIADYLNKMGARIPNVK 367
LN S ++ Y + F + +N+ + E A L + G +P ++
Sbjct: 288 NGGLNQFFSKSTHGFIIYLVVQAALILVFAYFYNMIQFNTV--EYAKQLQQNGGFVPGIR 345
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PGK T +YL K+ F G + L++L + +L S G +SV+I+VG I+
Sbjct: 346 PGKPTSDYLAKVGNKITFIGAISLALLTIVPALSSRFL---GLNLSFGGSSVIIVVGVIL 402
Query: 428 ELRRSYQAYNVMPSLSKALRR 448
E + +A M + L R
Sbjct: 403 ETVKQIEAMLTMKNYKGFLNR 423
>gi|224477200|ref|YP_002634806.1| preprotein translocase subunit SecY [Staphylococcus carnosus subsp.
carnosus TM300]
gi|229462805|sp|Q05217.2|SECY_STACT RecName: Full=Protein translocase subunit SecY
gi|222421807|emb|CAL28621.1| preprotein translocase SecY subunit [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 430
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 210/424 (49%), Gaps = 23/424 (5%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 78
+FFK+ E+R ++F T ++VI +IG +IP PG + + S G D L FG A
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNNQGS--QGVTDLLNTFGGGA 64
Query: 79 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGDVGRKKLNNVTRYFAIILAFI 124
Query: 138 EAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+++ +A Y A S ++ A +L G + W+ + I++ G G G S+II
Sbjct: 125 QSIGMAFQFNNYLKGALIIDPSPMSYLLIAIVLTTGTAFLLWLGEQITQYGVGNGISIII 184
Query: 196 CVGILTGYTETLYKMLSQ-LLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
GIL+ +L + Q +G S W + GL+ ++TM AV V + RK+ +Q
Sbjct: 185 FAGILSTLPSSLIQFYQQAFVGQSDTTMAWLQVAGLVIGLVLLTMGAVYVLQAVRKIPIQ 244
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QH 311
Y K S R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 245 YA--KKQSTQRLGSNAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPKADWAQQ 298
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKA 371
+ NP +++G +Y + F + + + P++++D L K G+ +P ++PG+
Sbjct: 299 IANTANPSSNIGMV--IYIILIIAFTYFYAFVQVN--PEKMSDNLKKQGSYVPGIRPGEQ 354
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +Y+TK+ F G + L+++A + ++ + + +G TS+LI++G IE +
Sbjct: 355 TKKYITKVLYRLTFVGSIFLAVIAILPILATKFM-NLPQSIQVGGTSLLIVIGVAIETMK 413
Query: 432 SYQA 435
S +A
Sbjct: 414 SLEA 417
>gi|148243233|ref|YP_001228390.1| preprotein translocase subunit SecY [Synechococcus sp. RCC307]
gi|147851543|emb|CAK29037.1| Preprotein translocase SecY subunit [Synechococcus sp. RCC307]
Length = 439
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 192/403 (47%), Gaps = 31/403 (7%)
Query: 47 FIPLPGFDRRLIPQDYLS----------FVSGSVDELGDFGAELKLSFFQLGISPQIVAS 96
+IP+PG DR Q F G + LG F LGI P I AS
Sbjct: 43 YIPIPGIDREAFQQFIQQGGQLIGFLDIFTGGGISALG---------IFALGILPFINAS 93
Query: 97 ILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAAS 155
I++Q+L +PSL L+K EG G KI +++LG+ +L++++ A PY++ +
Sbjct: 94 IILQLLTAALPSLEDLQKNEGEAGRRKIAQITRYVALGWGVLQSIVFAMILRPYALESVP 153
Query: 156 HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLL 215
V V TA LV G+M + WI + I+E G GQG+SL+I + I+ L +
Sbjct: 154 QVV-FVAQTALALVTGSMVVMWISEVITERGIGQGASLVIFLNIVATLPRALGSTVELAQ 212
Query: 216 GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYI 275
++ L+ VF I + V V EG R++ + ++ + A + E + Y+
Sbjct: 213 SGDRGTIAGIIVLVLVFLITILGIVCVQEGSRRIPIVSAKRQVGAGAM----LPERQSYL 268
Query: 276 PFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAF 335
P +N G+ P++ + ++ P +A++ S V LNP +S PW+Y ++
Sbjct: 269 PLKLNAGGVMPIIFASAVIFLPLTIANLTKSELLVRVAGYLNPNSST---PWLYALVFFG 325
Query: 336 FVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSI 393
+ F+ F + P++IA L K G +P V+PG AT +YL +Q GG+ L
Sbjct: 326 LICGFSFFYATLTINPQDIASNLKKGGVAVPGVRPGTATAKYLGGVQNRLTLLGGIFLGA 385
Query: 394 LATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+A ++ + +G TS+LI+VG I+ + Q Y
Sbjct: 386 VAIIPAAVEGA-TNVKTFQGLGATSLLILVGVAIDTAKQVQTY 427
>gi|325288597|ref|YP_004264778.1| protein translocase subunit secY/sec61 alpha [Syntrophobotulus
glycolicus DSM 8271]
gi|324963998|gb|ADY54777.1| protein translocase subunit secY/sec61 alpha [Syntrophobotulus
glycolicus DSM 8271]
Length = 430
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 216/440 (49%), Gaps = 30/440 (6%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
++L +++ IR+++ T +++++ R+G IP+P DR + Q S G D
Sbjct: 2 ALLETLKDAWQVPTIRKKIAFTLLMLLVFRVGAHIPIPFMDRNTLQQMMGS--GGIFDFF 59
Query: 74 GDF-GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
F G LK S F L I P I ASI++Q+L +VP L +L KEG DG +KI Y+ + +
Sbjct: 60 NTFSGGSLKRFSVFSLSIMPYITASIIIQLLTVVVPYLERLSKEGEDGRKKIMQYVRYAT 119
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVM--VTAFLLVCGAMTMSWICDTISESGFGQ 189
+ ++ + + L ++ + S ++K + A +L G + W+ + I+E G G
Sbjct: 120 VVLGFIQGFGL-TFGLRGALISTSTALKVPLYFTVAIVLTAGTAFLMWLGEQITEKGIGN 178
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
G SLII GI+ G + + + S L V W +LG+L + IV V + EG R++
Sbjct: 179 GISLIIFAGIVAGIPDAIKHLYSLLSVGEVSWLA-ILGILLLCVIVIAGVVFIQEGQRRI 237
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSP 307
+QY A +IP +N +G+ P++ L+AFPS +A+ + S
Sbjct: 238 PVQY-----AKRVVGRRVYGGQSTHIPLKVNQAGVMPIIFGVSLMAFPSTIATWMPQTSG 292
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPN 365
F V + ++ S + P Y +YA + F F I P ++AD L K G +P
Sbjct: 293 FAVFVHKYMSISGSFTSIP--YMILYAGLIIFFTYFYTGITFNPVDLADNLKKNGGFVPG 350
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T EY +I GG+ L+I+A ++ N ++G TS+LI+V
Sbjct: 351 IRPGRPTSEYFMRILNRVTLAGGVFLAIIAVLPALIMGTTGIPN--LALGGTSLLIVVSV 408
Query: 426 IIE---------LRRSYQAY 436
+E L+R YQ +
Sbjct: 409 ALETMKQVEAQLLQRHYQGF 428
>gi|414159394|ref|ZP_11415680.1| preprotein translocase subunit secY [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410884396|gb|EKS32222.1| preprotein translocase subunit secY [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 430
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 208/424 (49%), Gaps = 23/424 (5%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 78
+FFK+ E+R ++F T ++VI +IG +IP PG + S G D L FG A
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFESQQGS--QGVTDLLNTFGGGA 64
Query: 79 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGDVGRKKLNNVTRYFAILLAFI 124
Query: 138 EAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+++ +A Y A S ++ A +L G + W+ + I++ G G G S+II
Sbjct: 125 QSIGMAFQFNNYLKGALIVDPSPMSYLLIAIVLTAGTAFLLWLGEQITQYGVGNGISIII 184
Query: 196 CVGILTGYTETLYKMLSQ-LLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
GIL+ +L + Q +G S W + GL+ ++TM AV V + RK+ +Q
Sbjct: 185 FAGILSTLPSSLIQFYQQAFVGQSDTTIAWLQVAGLVIGLILLTMGAVYVLQAVRKIPIQ 244
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QH 311
Y K SA R T Y+P +N +G+ PV+ P L W Q
Sbjct: 245 YA--KKQSAQRLGRNAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPKADWAQQ 298
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKA 371
+ NP +++G V Y I F F N P+++AD L K G+ +P ++PG+
Sbjct: 299 IANTANPSSNIG---MVIYIILIIAFTYFYAFVQVN-PEKMADNLKKQGSYVPGIRPGEK 354
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +Y+TK+ F G + L+++A + ++ + + +G TS+LI++G IE +
Sbjct: 355 TKKYITKVLYRLTFVGSIFLAVIAILPILATKFM-NLPQSIQVGGTSLLIVIGVAIETMK 413
Query: 432 SYQA 435
S +A
Sbjct: 414 SLEA 417
>gi|339626645|ref|YP_004718288.1| preprotein translocase subunit SecY [Sulfobacillus acidophilus TPY]
gi|379006097|ref|YP_005255548.1| preprotein translocase subunit SecY [Sulfobacillus acidophilus DSM
10332]
gi|339284434|gb|AEJ38545.1| preprotein translocase, SecY subunit [Sulfobacillus acidophilus
TPY]
gi|361052359|gb|AEW03876.1| preprotein translocase, SecY subunit [Sulfobacillus acidophilus DSM
10332]
Length = 425
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 211/422 (50%), Gaps = 28/422 (6%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS-GSVDELGD 75
NA + S + RRL T +++V+ R+G IP+PG + ++ +L S ++ L
Sbjct: 3 QNAISALQASALTRRLGFTLLMLVVFRLGAHIPIPGVNAGVVQSLFLHGASIFALLNLFS 62
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA LS F L I P I ASI+MQ++ ++P++ + KEG DG +K+ + W+S+G
Sbjct: 63 GGATATLSIFALSIVPYINASIIMQLMTVVLPTVEEWTKEGEDGQKKMTQWTRWLSIGLG 122
Query: 136 ILEAVIVACYSLPYS-----IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
L+A+ V+ Y YS +Y H+V + +T +L+ G+ + W+ + IS+ G G G
Sbjct: 123 FLQALGVSYYLYNYSSNGQYVY-THHTVGSIFLTTLMLLTGSTVLMWVGEQISDRGVGNG 181
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SL++ GI++ ++ +L+Q + + V WP ++ V I+ V V EG RK+
Sbjct: 182 ISLLVLFGIVSRLPYGVH-VLAQYVSAGVLSWPKLIIFAVVAVIIIAAVVYVNEGLRKIP 240
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFW 309
+QY + + + ++P +N +G+ PV+ LL P +A GS W
Sbjct: 241 VQYPKRVVGRRLYQGT-----NTHLPIRVNQAGVIPVIFAISLLILPYTVAQFFRGS--W 293
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFF---VFLFNIFDIANLPKEIADYLNKMGARIPNV 366
V E TS Y I F VF F + ++AD L K G IP +
Sbjct: 294 VTVLERYFGFTS------PLYIILEFLLVVVFTFFYTQVVFKVDDVADNLKKAGGHIPGI 347
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PGK T EYL K+ + G L L ++A + + L +N F G TS+LIIVG
Sbjct: 348 RPGKPTAEYLAKVSGRLTWAGALFLGVVAILPSFVTMGL-GVNLYF--GGTSLLIIVGVA 404
Query: 427 IE 428
++
Sbjct: 405 LD 406
>gi|289548522|ref|YP_003473510.1| preprotein translocase subunit SecY [Thermocrinis albus DSM 14484]
gi|289182139|gb|ADC89383.1| preprotein translocase, SecY subunit [Thermocrinis albus DSM 14484]
Length = 431
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 218/445 (48%), Gaps = 40/445 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ ++ + R+RL T ++ I R+G IPLPG D + + + SF G++ L
Sbjct: 1 MLDYLKQALSLEDFRKRLVYTLFMLAIYRLGSHIPLPGVDTSALEEFFKSF-QGTIFYLY 59
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWI 130
D G +++ F LG+ P I ASI+MQ+L +P L +L KE D G KI Y ++
Sbjct: 60 DIFSGGNLARMTLFALGVMPYISASIMMQLLTVSIPELQRLAKEEGDYGRYKINQYTRYL 119
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISES 185
++ A ++++ VA + + + V V+ T LV M + W+ D I+E
Sbjct: 120 TILVAFVQSMGVALWLQGQASPKGTPIVPEGGPLFVVTTVVTLVASTMFLVWVGDRITEK 179
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF-MLGLLGVFTI-VTMWAVVVT 243
G G G S++I GI+ G+ + +M L SS PF +LG + +F I V ++ V +
Sbjct: 180 GIGNGMSILIFAGIVAGFPNAVIRMYQML--SSGDITPFKVLGAI-IFVIGVVVFTVFIQ 236
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
E R++ +QY R++ + Y+P INP+G+ P++ LL PS +
Sbjct: 237 EAERRIPIQY---PRRQVGRQE--VVGGSTYLPIKINPAGVIPIIFAQSLLIIPSTVLGF 291
Query: 304 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGA 361
+ P Q + + NP + ++Y +Y F+ F F A L P E+AD L + GA
Sbjct: 292 IKHPIAQALHDAFNPAS------FLYNFLYVLFIIFFTYFYTAVLINPAEVADNLRRAGA 345
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
+P ++PG+ T L I F G + LS++AT + +L+ F G T+ LI
Sbjct: 346 FVPGIRPGQDTQRLLEGIINRLAFVGSIFLSVVATVPVFVSIWLK---VPFYFGGTTALI 402
Query: 422 IVGSIIE---------LRRSYQAYN 437
+VG ++ L+R Y Y
Sbjct: 403 VVGVALDTINKIEASLLQRKYTHYR 427
>gi|310288004|ref|YP_003939263.1| protein translocase subunit secY [Bifidobacterium bifidum S17]
gi|309251941|gb|ADO53689.1| Protein translocase subunit secY [Bifidobacterium bifidum S17]
Length = 444
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 212/432 (49%), Gaps = 30/432 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 74
++F E+R ++ T +I+I RIG FIP PG + + + QD ++ +SGS + L
Sbjct: 6 QAFRTKELRNKILFTLAMIIIYRIGSFIPTPGVNYKTV-QDCINTLSGSQENFIGLVNLF 64
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 65 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 124
Query: 135 AILEAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
A+L++ + + +++ +SV ++ V ++ G + W+ + I++ G
Sbjct: 125 AVLQSTTILVTAQSGALFNNMCSSPIPDNSVWNLSVMVLIMTGGTGLIMWMAELITDKGI 184
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
GQG S++I + I +G+ L+++ G++ W F + + GV ++ ++ V R
Sbjct: 185 GQGMSILIFMSICSGFLPQLWEIGWGTNGTNGDWLKFGI-VTGVLVVILVFVDFVELSQR 243
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI--LG 305
++ +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RIPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQFGKSG 298
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARI 363
+ + + L TSV W Y +YA + F F I P E AD + + G I
Sbjct: 299 QSWVVWINKNLANTTSV----W-YIALYALMIVFFCFFYTSITFNPDETADNMKEYGGFI 353
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++ G AT YL + G + L +A T+L L +N G T++LII
Sbjct: 354 PGIRAGNATSRYLNYVMNRLNTVGAVYLLFVALIPTVLIMAL-NLNSKLPFGGTTILIIA 412
Query: 424 GSIIELRRSYQA 435
G ++ R +A
Sbjct: 413 GVGLDTLRQAKA 424
>gi|417656438|ref|ZP_12306123.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU028]
gi|418664348|ref|ZP_13225831.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU081]
gi|329736444|gb|EGG72712.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU028]
gi|374410646|gb|EHQ81389.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU081]
Length = 430
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 211/424 (49%), Gaps = 25/424 (5%)
Query: 23 FFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--AE 79
FF S E+R ++F T ++VI +IG +IP PG + S G+ + L FG A
Sbjct: 8 FFTSKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS--QGATELLNTFGGGAL 65
Query: 80 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A ++
Sbjct: 66 KRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFIQ 125
Query: 139 AVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 126 SIGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIF 185
Query: 197 VGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +Q
Sbjct: 186 AGILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPIQ 244
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QH 311
Y K SA R S T Y+P +N +G+ PV+ P L W Q+
Sbjct: 245 YA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQN 298
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKA 371
+ + NP +++G +Y + F + + + P+++AD L K G+ +P ++PG+
Sbjct: 299 IADTANPSSNIGM--IIYVVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGEQ 354
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +Y+TK+ F G + L+ +A I ++ + + IG TS+LI++G IE +
Sbjct: 355 TKKYITKVLYRLTFVGSIFLAAIAILPIIATKFM-GLPQSIQIGGTSLLIVIGVAIETMK 413
Query: 432 SYQA 435
+ +A
Sbjct: 414 TLEA 417
>gi|418614966|ref|ZP_13177922.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU118]
gi|418634539|ref|ZP_13196933.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU129]
gi|420191171|ref|ZP_14697106.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM037]
gi|420205068|ref|ZP_14710603.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM015]
gi|374818721|gb|EHR82868.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU118]
gi|374837069|gb|EHS00642.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU129]
gi|394257980|gb|EJE02879.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM037]
gi|394271148|gb|EJE15646.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM015]
Length = 430
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 209/423 (49%), Gaps = 24/423 (5%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--AEL 80
F E+R ++F T ++VI +IG +IP PG + S G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS--QGATELLNTFGGGALK 66
Query: 81 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +++
Sbjct: 67 RFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFIQS 126
Query: 140 VIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 127 IGMAFQFNNYLKGQLIIEQSVMGYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFA 186
Query: 198 GILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +QY
Sbjct: 187 GILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPIQY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QHV 312
K SA R S T Y+P +N +G+ PV+ P L W Q++
Sbjct: 246 A--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNI 299
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ NP +++G +Y + F + + + P+++AD L K G+ +P ++PG+ T
Sbjct: 300 ADTANPSSNIGM--IIYVVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGEQT 355
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+Y+TK+ F G + L+ +A I ++ + + IG TS+LI++G IE ++
Sbjct: 356 KKYITKVLYRLTFVGSIFLAAIAILPIIATKFM-GLPQSIQIGGTSLLIVIGVAIETMKT 414
Query: 433 YQA 435
+A
Sbjct: 415 LEA 417
>gi|186684492|ref|YP_001867688.1| preprotein translocase subunit SecY [Nostoc punctiforme PCC 73102]
gi|186466944|gb|ACC82745.1| preprotein translocase, SecY subunit [Nostoc punctiforme PCC 73102]
Length = 437
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 220/437 (50%), Gaps = 38/437 (8%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL VT ++++ R+G F+P+PG DR P+ + +SGS
Sbjct: 9 TAQETFMQMAQAAGLRGRLLVTVGVLILVRLGIFLPVPGIDR---PR-FAEAISGSNSIF 64
Query: 74 GDF----GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 127
G G L L F LGI P I ASI++Q+L +PSL L+K EG G KI
Sbjct: 65 GLLDIFSGRGLSTLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQIT 124
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
++++ +AIL++ A +L +A + V TA L G+M + W + I+E G
Sbjct: 125 RYVTVCWAILQST--AFSALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGI 182
Query: 188 GQGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G+SL+I V I+ + L L Q+ G +L L+ + TIV + VVV EG
Sbjct: 183 GNGASLLIFVNIVASLPKALGDTIDLVQVGGRETVGRVIVLILVFLATIVGI--VVVQEG 240
Query: 246 CRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
R++ + SA R+ + E ++P +N G+ P++ +L+ P ++A+
Sbjct: 241 MRRIPI-------ISARRQVGRRVLAEQRSFLPLRLNQGGVMPIIFAAAILSLPLLIANF 293
Query: 304 L-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKM 359
+ + L+P G+ WVY +Y + F+ F I N P ++A L KM
Sbjct: 294 AKNAELANIINTYLSPS---GSGSWVYALVYMISIIFFSYFYSSLILN-PVDVAQNLKKM 349
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G+ IP ++PGKAT EY+ ++ F G + L ++A T ++ L + +G TS+
Sbjct: 350 GSSIPGIRPGKATSEYIERVSNRLTFLGAIFLGLVAIIPTGVESAL-GVPTFKGLGATSL 408
Query: 420 LIIVGSIIELRRSYQAY 436
LI+VG I+ R Q Y
Sbjct: 409 LILVGVAIDTARQIQTY 425
>gi|150392140|ref|YP_001322189.1| preprotein translocase subunit SecY [Alkaliphilus metalliredigens
QYMF]
gi|149952002|gb|ABR50530.1| preprotein translocase, SecY subunit [Alkaliphilus metalliredigens
QYMF]
Length = 423
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 212/423 (50%), Gaps = 30/423 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 86
++R ++ T +++VI R+G IP+PG D ++ + S+ +L GA ++ F
Sbjct: 13 DLRGKILYTMMMLVIFRLGSVIPVPGIDIEVVRNIVGNAQLFSLLDLFSGGAFGNMTIFA 72
Query: 87 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 146
L I+P I ASI+MQ+L +P+L +L KEG +G +KI Y + ++ A+++A ++
Sbjct: 73 LSITPYITASIIMQLLTIAIPALEELSKEGEEGRKKIAQYQRYGTVVLALIQATGISIGL 132
Query: 147 LPYS-IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 205
+ I + S+ V++T L G + W+ + I+E G G G SL+I GI++ +
Sbjct: 133 FRQALIQTDAFSIIVVILT---LTAGTAFLMWLGEQITEKGIGNGISLLIFAGIVSRVPD 189
Query: 206 TLYK--MLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFKLA 259
++Y+ +L+Q S+ ++ L + +V V++TEG RK+ +QY G K+
Sbjct: 190 SVYRTYVLAQQGEISIIS---IIAFLAIAVLVIAAVVLITEGVRKIPVQYAKRVVGRKMY 246
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILNP 318
+IP +N +G+ PV+ LL+FP I+ S GS F V L P
Sbjct: 247 GGQSS---------HIPLKVNQAGVIPVIFAMSLLSFPQIVGSFFPGSGFEGFVNRFLTP 297
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYL 376
T +G ++Y + A + F F A P E+A + K G IP ++PGK T +YL
Sbjct: 298 STGMGT--FIYVMMQAVLIIFFTYFYTAVTFNPAEVATNMKKNGGFIPGIRPGKPTSDYL 355
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
++ G L+ +A L I + G T++LI+VG +E + +A
Sbjct: 356 NRVLTRITLAGACFLATIAVLPIALSQL---IGMQTAFGGTALLIVVGVALETMKQVEAQ 412
Query: 437 NVM 439
+M
Sbjct: 413 MLM 415
>gi|223042529|ref|ZP_03612578.1| preprotein translocase, SecY subunit [Staphylococcus capitis SK14]
gi|314934277|ref|ZP_07841636.1| preprotein translocase, SecY subunit [Staphylococcus caprae C87]
gi|417906297|ref|ZP_12550088.1| preprotein translocase, SecY subunit [Staphylococcus capitis
VCU116]
gi|222444192|gb|EEE50288.1| preprotein translocase, SecY subunit [Staphylococcus capitis SK14]
gi|313652207|gb|EFS15970.1| preprotein translocase, SecY subunit [Staphylococcus caprae C87]
gi|341598167|gb|EGS40684.1| preprotein translocase, SecY subunit [Staphylococcus capitis
VCU116]
Length = 430
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 208/423 (49%), Gaps = 24/423 (5%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--AEL 80
F E+R ++F T ++VI +IG +IP PG + S G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS--QGATELLNTFGGGALK 66
Query: 81 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +++
Sbjct: 67 RFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGEMGRRKINNVTRYFAIILAFIQS 126
Query: 140 VIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ +A Y S+ ++ A +L G + W+ D I++ G G G SLII
Sbjct: 127 IGMAFQFNNYLGGKLIMDKSIMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFA 186
Query: 198 GILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
GIL+ ++ + L +S+ W + GL+ ++T+ A+ V E RK+ +QY
Sbjct: 187 GILSTLPSSIEQFGQSLFVGQDDTSLAWLK-IAGLIVALILLTVGAIFVLEAKRKIPIQY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QHV 312
K S R + T Y+P +N +G+ PV+ P L W Q++
Sbjct: 246 A--KKQSTQRLGTQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNI 299
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ NP +++G VY + F + + + P+++AD L K G+ +P ++PG+ T
Sbjct: 300 ADTANPSSNIGM--IVYIVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGEQT 355
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+Y+TK+ F G + L+++A + ++ + + IG TS+LI++G IE ++
Sbjct: 356 KKYITKVLYRLTFVGSIFLAVIAILPIVATKFM-GLPQSIQIGGTSLLIVIGVAIETMKT 414
Query: 433 YQA 435
+A
Sbjct: 415 LEA 417
>gi|149072026|ref|YP_001293597.1| preprotein translocase subunit SecY [Rhodomonas salina]
gi|134302977|gb|ABO70781.1| preprotein translocase subunit SecY [Rhodomonas salina]
Length = 420
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 219/424 (51%), Gaps = 36/424 (8%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD--------YLSFVSGSVDELGDF 76
+ I+ R+ +T L+++SR+G FIP+PG D Q +L+ SG G F
Sbjct: 10 REGIQERILLTLGLLILSRLGTFIPVPGVDHDAFYQSISTNPIVTFLNIFSG-----GGF 64
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFA 135
+ + F LGI P I ASI++Q+ +PSL +L+KE G G +KI +I+LG+A
Sbjct: 65 AS---IGIFALGIVPYINASIIIQLATTSIPSLEKLQKEEGEAGRQKISQITRYIALGWA 121
Query: 136 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
++++ V+ + PY + + V+ L G+M + W + I+E G G G SL+I
Sbjct: 122 AIQSIGVSFWVRPY---VFNWDAQFVIEMTLALTTGSMLIMWFSEQITEKGIGNGPSLLI 178
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
+ I+ G + L + S +G++ + + L +F I+ + + + EG R++ +
Sbjct: 179 FINIIAGLPK-LIQQKSGSVGTNTQITELFV-LASIFLIMIVGIIFIQEGTRRIPI-ISA 235
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 315
+L ++ Y+P +N G+ P++ + +L P+ L I+ + F ++ +
Sbjct: 236 RQLGKGQSQNK-----TSYLPLRLNQGGVMPIIFASAILVLPAYLGQIVKNQFLLNILNL 290
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL---PKEIADYLNKMGARIPNVKPGKAT 372
L+P + G + Y I+ F + LF + A+L P +++ L KM + IP V+PGKAT
Sbjct: 291 LSPTS--GDKNL--YLIFYFSLILFFSYFYASLIINPNDVSQNLKKMESSIPGVRPGKAT 346
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+YL K F G L L+ +A +I+++ + I+ +G TS+LI+VG I+ R
Sbjct: 347 TDYLQKTLNRLTFLGALFLAFIAVIPSIIEN-VTNISTFKGLGATSLLILVGVAIDTSRQ 405
Query: 433 YQAY 436
Q Y
Sbjct: 406 IQTY 409
>gi|158337828|ref|YP_001519004.1| preprotein translocase subunit SecY [Acaryochloris marina
MBIC11017]
gi|359457962|ref|ZP_09246525.1| preprotein translocase subunit SecY [Acaryochloris sp. CCMEE 5410]
gi|158308069|gb|ABW29686.1| preprotein translocase, SecY subunit [Acaryochloris marina
MBIC11017]
Length = 435
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 211/438 (48%), Gaps = 43/438 (9%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 65
+A E+F + + +R R+F+T L+++ R+G +P+PG +R +L F
Sbjct: 10 SAQETFMQMAQAAGLRGRVFITLGLLILVRLGIRLPVPGINRAAFTSTFAGNPVFGFLDF 69
Query: 66 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 124
SG G F A L F LGI P I ASI++Q+L +PSL +L+K EG G KI
Sbjct: 70 FSG-----GGFSA---LGIFALGIIPFINASIILQLLTAALPSLERLQKDEGEAGRRKIS 121
Query: 125 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+++LG+AI+++ A + + ++ L G+M + W+ + I+E
Sbjct: 122 QITRYVALGWAIIQSTGFAILINSAEGVVFNPGIVFIVQMVVALTAGSMFVMWVGELITE 181
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G G+SL+I + I++G TL L V ++ L+ VF ++ + V V E
Sbjct: 182 RGVGNGASLLIFLSIVSGLPSTLGNALQIAEQGEVSK---VIILISVFILMIVGIVFVQE 238
Query: 245 GCRKVKLQYYGFKLASAAREDSPIT--EVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
G R++ + Y A R+ T E + Y+P +N G+ P++ + +L P LA
Sbjct: 239 GTRRIPIVY-------ARRQVGRRTYQEQKSYLPLRLNSGGVMPIIFASAMLILPGTLAG 291
Query: 303 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMG 360
+ + L+P +S+ PWVY Y + F+ F + P +++ L KMG
Sbjct: 292 LTNNATIIEFAGYLSPNSSL---PWVYVIFYLSMIVFFSYFYASLVVNPIDMSQNLKKMG 348
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF--TS 418
A IP ++PG+AT EY+ K+ G L + + R + G GF TS
Sbjct: 349 ASIPGIRPGRATTEYVEKVLNRLTLLGAFFLGAVVLVPVAAE---RVVGGGIFSGFGATS 405
Query: 419 VLIIVGSIIELRRSYQAY 436
+LI+VG I+ + Q Y
Sbjct: 406 LLILVGVAIDTAKQIQTY 423
>gi|359410090|ref|ZP_09202555.1| preprotein translocase, SecY subunit [Clostridium sp. DL-VIII]
gi|357168974|gb|EHI97148.1| preprotein translocase, SecY subunit [Clostridium sp. DL-VIII]
Length = 428
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 220/431 (51%), Gaps = 25/431 (5%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F E+R+++ T +L+ R+G IPLPG I DYL +S S LG
Sbjct: 1 MLQTLRNAFKVPELRKKILWTILLVAAFRLGSHIPLPG-----INSDYLKNLSNSGGLLG 55
Query: 75 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
+ GA + S LG+ P I ASI+MQ+L +P + QL+KEG G +KI+S +
Sbjct: 56 FYDMLSGGAFSRSSILALGVMPYINASIIMQLLTVAIPQMEQLQKEGDTGRKKIQSATRY 115
Query: 130 ISLGFA-ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+SLG + IL I+A S + + K ++V F LV G W+ D I+ G G
Sbjct: 116 VSLGISFILAYGILATISSSGATNGINLMQKLIIV--FALVVGTTFCMWLGDQITVKGIG 173
Query: 189 QGSSLIICVGILTGYTETLYKMLS-QLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G+S++I + I++ T+ M++ Q GS+ + G V + T+ ++E R
Sbjct: 174 NGTSILIFINIISRVPMTIGSMMTMQEAGSASIVEIILFGAFIVLLLGTILYFSLSE--R 231
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
+V +QY G K +S + + +IP +I S + ++ + ++ FP +A++ G
Sbjct: 232 RVTVQYAG-KFSSG--NSNMVKSQSTHIPLSIIGSAVLAIIFSMSVMDFPRTIATLFGGD 288
Query: 308 FWQHVKEILNPETSV-GARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
+ K IL TS+ ++ W+Y +YA FN F I P E+++ L+K +P
Sbjct: 289 -KEWAKWILTNNTSIFNSKSWMYLVLYAVLTIFFNWFYTQITFKPDEMSENLHKSAGFVP 347
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
V+PG+ T + ++ F GG+L +ILA + I+++Y + N FS T +LI++
Sbjct: 348 GVRPGEETTIFFERVLNRVSFIGGILAAILAVTPKIIENYTQFQNIAFS--GTGLLIVIN 405
Query: 425 SIIELRRSYQA 435
++ R ++
Sbjct: 406 VALDFTRRVES 416
>gi|442321573|ref|YP_007361594.1| preprotein translocase subunit SecY [Myxococcus stipitatus DSM
14675]
gi|441489215|gb|AGC45910.1| preprotein translocase subunit SecY [Myxococcus stipitatus DSM
14675]
Length = 448
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 208/441 (47%), Gaps = 40/441 (9%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDEL 73
LN A F +E+R RL T L+ + RIG FI PG DR + D G V
Sbjct: 3 LNAFANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRAAMNAFMDAQKQSGGLVSLF 62
Query: 74 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
F GA ++S F LGI P + ASI+MQ+L ++PSL +L+KEG G +KI Y + +
Sbjct: 63 NLFSGGALEQMSIFGLGIMPYVSASIIMQLLAVVIPSLERLQKEGAAGRQKINQYTRYGT 122
Query: 132 LGFAILEAVIVACY--SLPYS---------IYAASHSVKHVMVTAFLLVCGAMTMSWICD 180
+ ++++ + ++ + SL S + SV +T L G + W+ +
Sbjct: 123 IVLSVIQGIGISRWLASLGRSDAGQSGFNQVVVPDDSVWFTFMTVISLTAGTAFIMWLGE 182
Query: 181 TISESGFGQGSSLIICVGILTGY---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM 237
I+E G G G SLII GI+ G TL +M Q + + ++ +L + +V
Sbjct: 183 RITERGIGNGISLIIFAGIVAGVLPGANTLLEMTQQEVIAVAEVLALLVFMLLIIAVV-- 240
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
V V G R++ +QY A Y P +N +G+ P + +L+FP
Sbjct: 241 --VYVERGMRRIPIQY-----AKRMAGRRMFAGQATYFPMKVNTAGVIPPIFAGAVLSFP 293
Query: 298 SILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADY 355
+ L + PF Q + + ++ W+Y ++ V F F A P ++AD
Sbjct: 294 ATLGTWF--PFLQ------DAQRAIEGNLWIYNGLFVLLVIFFAYFYTALTFRPDDVADN 345
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
+ K G IP ++PG+ T E++ ++ F G L L+++ +++ L N F+ G
Sbjct: 346 IKKQGGYIPGIRPGRQTAEFIERVLNRLTFGGALYLAVICVIPSVISGLL---NVRFTFG 402
Query: 416 FTSVLIIVGSIIELRRSYQAY 436
T++LI+VG ++ + + +
Sbjct: 403 GTALLIVVGVALDTVQQIEGH 423
>gi|49189|emb|CAA49691.1| secY [Staphylococcus carnosus]
Length = 430
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 210/424 (49%), Gaps = 23/424 (5%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 78
+FFK+ E+R ++F T ++VI +IG +IP PG + + S G D L FG A
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNNQGS--QGVTDLLNTFGGGA 64
Query: 79 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGDVGRKKLNNVTRYFAIILAFI 124
Query: 138 EAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+++ +A Y A S ++ A +L G + W+ + I++ G G G S+II
Sbjct: 125 QSIGMAFQFNNYLKGALIIDPSPMSYLLIAIVLTTGTAFLLWLGEQITQYGVGNGISIII 184
Query: 196 CVGILTGYTETLYKMLSQ-LLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
GIL+ +L + Q +G S W + GL+ ++TM AV V + RK+ +Q
Sbjct: 185 FAGILSTLPSSLIQFYQQAFVGQSDTSMAWLQVAGLVIGLVLLTMGAVYVLQAVRKIPIQ 244
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QH 311
Y K S R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 245 YA--KKQSTQRLGSNAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPKADWAQQ 298
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKA 371
+ NP +++G +Y + F + + + P++++D L K G+ +P ++PG+
Sbjct: 299 IANTANPSSNIGMV--IYIILIIAFTYFYAFVQVN--PEKMSDNLKKQGSYVPGIRPGEQ 354
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +Y+TK+ F G + L+++A + ++ + + +G TS+LI++G IE +
Sbjct: 355 TKKYITKVLYRLTFVGSIFLAVIAILPILATKFM-NLPQSIQVGGTSLLIVIGVAIETMK 413
Query: 432 SYQA 435
S +A
Sbjct: 414 SLEA 417
>gi|27468721|ref|NP_765358.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
ATCC 12228]
gi|57867681|ref|YP_189374.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
RP62A]
gi|251812067|ref|ZP_04826540.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875362|ref|ZP_06284235.1| accessory Sec system translocase SecY2 [Staphylococcus epidermidis
SK135]
gi|293368453|ref|ZP_06615077.1| type I general secretory pathway preprotein translocase SecY
[Staphylococcus epidermidis M23864:W2(grey)]
gi|417658761|ref|ZP_12308381.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU045]
gi|417912363|ref|ZP_12556057.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU105]
gi|417913241|ref|ZP_12556910.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU109]
gi|418326223|ref|ZP_12937414.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU071]
gi|418413200|ref|ZP_12986443.1| preprotein translocase subunit secY [Staphylococcus epidermidis
BVS058A4]
gi|418605544|ref|ZP_13168862.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU041]
gi|418610814|ref|ZP_13173921.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU065]
gi|418612889|ref|ZP_13175912.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU117]
gi|418617806|ref|ZP_13180695.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU120]
gi|418621728|ref|ZP_13184494.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU123]
gi|418623808|ref|ZP_13186507.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU125]
gi|418627185|ref|ZP_13189765.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU126]
gi|418628260|ref|ZP_13190814.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU127]
gi|419768288|ref|ZP_14294415.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-250]
gi|419771544|ref|ZP_14297596.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-K]
gi|420164307|ref|ZP_14671038.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM095]
gi|420166444|ref|ZP_14673129.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM088]
gi|420169126|ref|ZP_14675730.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM087]
gi|420170714|ref|ZP_14677273.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM070]
gi|420173547|ref|ZP_14680039.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM067]
gi|420183524|ref|ZP_14689652.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM049]
gi|420185865|ref|ZP_14691942.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM040]
gi|420188219|ref|ZP_14694230.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM039]
gi|420195290|ref|ZP_14701084.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM021]
gi|420198136|ref|ZP_14703853.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM020]
gi|420203057|ref|ZP_14708642.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM018]
gi|420207126|ref|ZP_14712618.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM008]
gi|420209952|ref|ZP_14715385.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM003]
gi|420212707|ref|ZP_14718054.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM001]
gi|420214701|ref|ZP_14719977.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05005]
gi|420217020|ref|ZP_14722207.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05001]
gi|420221061|ref|ZP_14726015.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH04008]
gi|420223450|ref|ZP_14728347.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH08001]
gi|420223898|ref|ZP_14728760.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH06004]
gi|420228375|ref|ZP_14733127.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05003]
gi|420229966|ref|ZP_14734666.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH04003]
gi|420232417|ref|ZP_14737055.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH051668]
gi|420235070|ref|ZP_14739622.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH051475]
gi|421607944|ref|ZP_16049176.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
AU12-03]
gi|68723610|sp|Q8CNF3.1|SECY_STAES RecName: Full=Protein translocase subunit SecY
gi|81673636|sp|Q5HM19.1|SECY_STAEQ RecName: Full=Protein translocase subunit SecY
gi|27316269|gb|AAO05444.1|AE016750_49 preprotein translocase SecY subunit [Staphylococcus epidermidis
ATCC 12228]
gi|57638339|gb|AAW55127.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
RP62A]
gi|251804401|gb|EES57058.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
BCM-HMP0060]
gi|281296127|gb|EFA88648.1| accessory Sec system translocase SecY2 [Staphylococcus epidermidis
SK135]
gi|291317411|gb|EFE57833.1| type I general secretory pathway preprotein translocase SecY
[Staphylococcus epidermidis M23864:W2(grey)]
gi|329737055|gb|EGG73310.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU045]
gi|341650937|gb|EGS74746.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU105]
gi|341656334|gb|EGS80053.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU109]
gi|365226195|gb|EHM67417.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU071]
gi|374401992|gb|EHQ73038.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU041]
gi|374403651|gb|EHQ74651.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU065]
gi|374817620|gb|EHR81799.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU117]
gi|374817690|gb|EHR81868.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU120]
gi|374828406|gb|EHR92241.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU123]
gi|374829542|gb|EHR93342.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU125]
gi|374830048|gb|EHR93837.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU126]
gi|374838312|gb|EHS01859.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU127]
gi|383360202|gb|EID37605.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-250]
gi|383361268|gb|EID38646.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-K]
gi|394231928|gb|EJD77549.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM095]
gi|394232020|gb|EJD77640.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM087]
gi|394233655|gb|EJD79252.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM088]
gi|394239766|gb|EJD85199.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM070]
gi|394239902|gb|EJD85334.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM067]
gi|394248698|gb|EJD93929.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM049]
gi|394253219|gb|EJD98232.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM040]
gi|394255148|gb|EJE00107.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM039]
gi|394263487|gb|EJE08218.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM021]
gi|394264870|gb|EJE09539.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM020]
gi|394268771|gb|EJE13325.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM018]
gi|394275600|gb|EJE19973.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM008]
gi|394277384|gb|EJE21708.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM003]
gi|394279091|gb|EJE23401.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM001]
gi|394283093|gb|EJE27270.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05005]
gi|394285291|gb|EJE29374.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH04008]
gi|394287473|gb|EJE31433.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH08001]
gi|394290791|gb|EJE34637.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05001]
gi|394294959|gb|EJE38619.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05003]
gi|394296960|gb|EJE40574.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH06004]
gi|394298438|gb|EJE42008.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH04003]
gi|394301279|gb|EJE44741.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH051668]
gi|394303598|gb|EJE47016.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH051475]
gi|406656365|gb|EKC82772.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
AU12-03]
gi|410879288|gb|EKS27138.1| preprotein translocase subunit secY [Staphylococcus epidermidis
BVS058A4]
Length = 430
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 209/423 (49%), Gaps = 24/423 (5%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--AEL 80
F E+R ++F T ++VI +IG +IP PG + S G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS--QGATELLNTFGGGALK 66
Query: 81 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +++
Sbjct: 67 RFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFIQS 126
Query: 140 VIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 127 IGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFA 186
Query: 198 GILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +QY
Sbjct: 187 GILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPIQY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QHV 312
K SA R S T Y+P +N +G+ PV+ P L W Q++
Sbjct: 246 A--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNI 299
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ NP +++G +Y + F + + + P+++AD L K G+ +P ++PG+ T
Sbjct: 300 ADTANPSSNIGM--IIYVVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGEQT 355
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+Y+TK+ F G + L+ +A I ++ + + IG TS+LI++G IE ++
Sbjct: 356 KKYITKVLYRLTFVGSIFLAAIAILPIIATKFM-GLPQSIQIGGTSLLIVIGVAIETMKT 414
Query: 433 YQA 435
+A
Sbjct: 415 LEA 417
>gi|332712150|ref|ZP_08432078.1| protein translocase subunit secY/sec61 alpha [Moorea producens 3L]
gi|332348956|gb|EGJ28568.1| protein translocase subunit secY/sec61 alpha [Moorea producens 3L]
Length = 446
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 220/447 (49%), Gaps = 50/447 (11%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY--------LSF 65
A E+F + + +R RL VT L++++R+G F+P+PG DR + L F
Sbjct: 10 TAQETFMQMAQAAGLRGRLLVTVGLLILARLGVFLPVPGIDRARFSAELQNSPFVGLLDF 69
Query: 66 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 124
SG G F A L F LGI P I ASI++Q+L +P+L L+K EG G KI
Sbjct: 70 FSG-----GGFSA---LGIFALGILPYINASIILQLLTAAIPALENLQKNEGEAGRRKIG 121
Query: 125 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+++LG+++++++ ++ ++ +++ + V T L G+M + W+ + I+E
Sbjct: 122 QITRYVALGWSVIQSIGLSLWAQRFAVEPGAF---FVFETVLALTAGSMFVMWLSELITE 178
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G G+SL+I V I+ TL + + ++ LL VF ++ + V V E
Sbjct: 179 RGIGNGASLLIFVNIVAVLPRTLGQTIELAQTGGRETVGKVIVLLLVFLVMIVGIVFVQE 238
Query: 245 GCRKVKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
G R++ + +A R+ E + Y+P +N G+ P++ + +L P+ LA
Sbjct: 239 GSRRIPI-------ITARRQVGKRLYRERKNYLPLRLNQGGVMPIIFASAVLILPTSLAG 291
Query: 303 I---------LGS--PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--P 349
I LGS + LNP G PWVY +Y + F+ F + + P
Sbjct: 292 ITSGDNSNGLLGSINQVLIQIANYLNPN---GQTPWVYVAVYLVLILFFSYFYASLIINP 348
Query: 350 KEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN 409
+++ L KMGA IP ++PG+AT EY+ ++ G + L ++A T ++ +
Sbjct: 349 VDMSQNLKKMGASIPGIRPGRATSEYIERVLNRLTLLGAIFLGLVAVVPTAVESA-TGVT 407
Query: 410 EGFSIGFTSVLIIVGSIIELRRSYQAY 436
+G TS+LI+VG I+ + Q Y
Sbjct: 408 TFRGLGATSLLILVGVAIDTAKQIQTY 434
>gi|284929579|ref|YP_003422101.1| protein translocase subunit secY/sec61 alpha [cyanobacterium
UCYN-A]
gi|284810023|gb|ADB95720.1| protein translocase subunit secY/sec61 alpha [cyanobacterium
UCYN-A]
Length = 438
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 215/435 (49%), Gaps = 34/435 (7%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS--VD 71
A E+F + + +R RL +T L+ + R G FIP+PG DR + ++S +S S +
Sbjct: 10 TAQETFLQMAQAAGLRSRLLITIGLLTLIRFGIFIPIPGIDR----EKFISAISNSPVLG 65
Query: 72 ELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIW 128
L F G L F LGI P I ASI+MQ+L +PSL L+K EG G KI
Sbjct: 66 FLDIFTGGGISTLGIFALGILPFINASIIMQLLTAAIPSLEDLQKNEGEAGRRKISQITR 125
Query: 129 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+++ G+A++++ + L YA S + V T L G+M + W+ + I+E G G
Sbjct: 126 YVAAGWAVIQSTAITVGLLRE--YALSDTFWFVPETVLALTAGSMFVMWVSELITERGIG 183
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
G+SL+I V I+ TL + + + ++ LL VF ++ + V V EG R+
Sbjct: 184 NGASLLIFVNIVASLPRTLGQTIDYAQTGGRQAVAQVIILLLVFLVMIVGIVFVQEGTRR 243
Query: 249 VKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
+ + SA R+ E Y+P +N G+ P++ + +L P L LGS
Sbjct: 244 IPI-------ISARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLILPQSLIGFLGS 296
Query: 307 PFWQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIFD---IANLPKEIADYLNKMGA 361
V E L T+ RP W Y +Y+ + F+ F I N P++I+ L KMG+
Sbjct: 297 --GGVVTETLIKVTNA-LRPGTWTYVGVYSILILFFSYFYASLIVN-PEDISKNLKKMGS 352
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
IP ++PG+ T EYL + F G LS +AT T+++ + +G TS+LI
Sbjct: 353 SIPGIRPGQKTKEYLEGVLNRLTFLGAGFLSFVATVPTLVEGA-TGVTTFRGLGATSLLI 411
Query: 422 IVGSIIELRRSYQAY 436
+VG I+ + Q Y
Sbjct: 412 LVGVAIDTAKQIQTY 426
>gi|428781718|ref|YP_007173504.1| preprotein translocase subunit SecY [Dactylococcopsis salina PCC
8305]
gi|428695997|gb|AFZ52147.1| preprotein translocase, SecY subunit [Dactylococcopsis salina PCC
8305]
Length = 448
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 140/450 (31%), Positives = 214/450 (47%), Gaps = 56/450 (12%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 65
NA E+F + + +R RL +T LI++ R+G IP+PG DR Q +L+F
Sbjct: 10 NAQETFMQMAQAAGLRSRLLITVGLILLVRLGVRIPVPGVDRAGFAQAVQDSPISGFLNF 69
Query: 66 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 124
+SG G + F LGI P I ASI+MQ+L +P L L+K EG G KI
Sbjct: 70 LSG--------GGLSAVGIFALGILPFINASIIMQLLTAALPYLENLQKNEGEAGRRKIS 121
Query: 125 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+++L AI + +A + PY A + ++ T L G+M + WI + I+E
Sbjct: 122 QITRYVALASAIFNSFGLASFVQPY---AYNPGPIFLLKTVIALTAGSMFVIWISELITE 178
Query: 185 SGFGQGSSLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 242
G G G+SL+I V I+ TL + +Q G +L L+ + IV + V V
Sbjct: 179 RGIGNGASLLIFVNIVAILPTTLGNTIEFAQTGGREAVAQVLVLALVFLVMIVGI--VFV 236
Query: 243 TEGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
EG R++ + SA R+ E Y+P +N G+ P++ + LL PS L
Sbjct: 237 QEGTRRIPI-------VSARRQVGRRLYRERTSYLPLRVNQGGVLPIIFASTLLILPSSL 289
Query: 301 ASIL--GSP-----------FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DI 345
A GS F V LNP G PW+Y ++Y + F+ F +
Sbjct: 290 AQFTQGGSEEQTGIAATLNQFLIQVSTYLNPG---GPTPWLYVSVYLLLILFFSYFYASL 346
Query: 346 ANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL 405
P +++ L KMGA IP ++PGKAT +YL K+ G + L ++AT T ++
Sbjct: 347 VVNPVDMSQNLKKMGASIPGIRPGKATSDYLQKVINRLTLLGAIFLGLVATVPTAVETA- 405
Query: 406 RRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
+ +G TS+LI+VG I+ + Q+
Sbjct: 406 TGVTTFQGLGATSLLILVGVAIDTAKQIQS 435
>gi|417645736|ref|ZP_12295629.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU144]
gi|329731201|gb|EGG67571.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU144]
Length = 430
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 209/423 (49%), Gaps = 24/423 (5%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--AEL 80
F E+R ++F T ++VI +IG +IP PG + S G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS--QGATELLNTFGGGALK 66
Query: 81 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +++
Sbjct: 67 RFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNITRYFAIILAFIQS 126
Query: 140 VIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 127 IGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFA 186
Query: 198 GILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +QY
Sbjct: 187 GILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPIQY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QHV 312
K SA R S T Y+P +N +G+ PV+ P L W Q++
Sbjct: 246 A--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNI 299
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ NP +++G +Y + F + + + P+++AD L K G+ +P ++PG+ T
Sbjct: 300 ADTANPSSNIGM--IIYVVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGEQT 355
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+Y+TK+ F G + L+ +A I ++ + + IG TS+LI++G IE ++
Sbjct: 356 KKYITKVLYRLTFVGSIFLAAIAILPIIATKFM-GLPQSIQIGGTSLLIVIGVAIETMKT 414
Query: 433 YQA 435
+A
Sbjct: 415 LEA 417
>gi|307154824|ref|YP_003890208.1| preprotein translocase subunit SecY [Cyanothece sp. PCC 7822]
gi|306985052|gb|ADN16933.1| preprotein translocase, SecY subunit [Cyanothece sp. PCC 7822]
Length = 439
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 137/435 (31%), Positives = 217/435 (49%), Gaps = 33/435 (7%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS---- 69
A E+F + + +R RL VT L+++ R G F+P+PG DR + F+ S
Sbjct: 10 TAQETFMQMAQAAGLRGRLLVTVGLLILVRFGIFVPVPGLDR----AKFADFIQNSPALG 65
Query: 70 VDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIW 128
+ ++ G L F LGI P I ASI+MQ+L +PSL L+K EG G KI
Sbjct: 66 ILDIFTGGGLSTLGIFALGILPFINASIIMQLLTAAIPSLEDLQKNEGEAGRRKISQISR 125
Query: 129 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+++LG+AI+++ + L + A + ++ T L G+M + WI + I+E G G
Sbjct: 126 YVALGWAIIQSFGITLGLLVQNGVIAGSPIP-ILETVLALTAGSMFVMWISELITERGIG 184
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
G+SL+I V I+ +TL + + ++ LL VF I+ + V V EG R+
Sbjct: 185 NGASLLIFVNIVAVLPKTLGNTIDYAQTGGRQAVAQVVILLLVFLIMIIGIVFVQEGTRR 244
Query: 249 VKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA-SILG 305
+ + SA R+ E Y+P +N G+ P++ + +L P LA S+ G
Sbjct: 245 IPI-------ISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLILPYQLARSVSG 297
Query: 306 -SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGA 361
F Q + I+N + W+Y Y+ +F F+ F I N PK+++ L KMGA
Sbjct: 298 EGTFSQILIRIVN---YLQPGSWIYVLFYSLLIFFFSFFYASLIVN-PKDMSQNLKKMGA 353
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
IP ++PG AT YL + F G + LSI+AT T+++ + +G TS+LI
Sbjct: 354 SIPGIRPGTATSNYLEGVLNRLTFLGAIFLSIVATVPTLVEGA-TGVTTFQGLGATSLLI 412
Query: 422 IVGSIIELRRSYQAY 436
+VG I+ + Q Y
Sbjct: 413 LVGVAIDTAKQIQTY 427
>gi|108757580|ref|YP_631518.1| preprotein translocase subunit SecY [Myxococcus xanthus DK 1622]
gi|108461460|gb|ABF86645.1| preprotein translocase, SecY subunit [Myxococcus xanthus DK 1622]
Length = 448
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 207/439 (47%), Gaps = 36/439 (8%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDEL 73
LN A F +E+R RL T L+ + RIG FI PG DR + D G V
Sbjct: 3 LNAFANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVSLF 62
Query: 74 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
F GA ++S F LGI P + ASI+MQ+L +VPSL +L+KEG G +KI Y + +
Sbjct: 63 NLFSGGALEQMSIFGLGIMPYVSASIIMQLLAVVVPSLERLQKEGAGGRQKINQYTRYGT 122
Query: 132 LGFAILEAVIVACY--SLPYS---------IYAASHSVKHVMVTAFLLVCGAMTMSWICD 180
+ ++++ + ++ + SL S + SV +T L G + W+ +
Sbjct: 123 IALSVVQGIGISRWLASLGRSDGGQSGFNQVVVPDDSVWFTFMTVVSLTAGTAFIMWLGE 182
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I+E G G G SLII GI+ G ++L L V +L L+ VF ++ + AV
Sbjct: 183 RITERGIGNGISLIIFAGIVAGLLPGAKQLLD-LTRQDVISMAEVLALV-VFMLIIIAAV 240
Query: 241 VVTE-GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V E G R++ +QY A Y P +N SG+ P + +L+FP+
Sbjct: 241 VYVERGMRRIPIQY-----AKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGAVLSFPAT 295
Query: 300 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLN 357
L + PF Q + + W+Y ++ V F F A P ++AD +
Sbjct: 296 LGTWF--PFLQGFQRAIEGNL------WIYNGLFVVMVIFFAYFYTALTFRPDDVADNIK 347
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++PG+ T E++ ++ F G + LSI+ +++ L F+ G T
Sbjct: 348 KQGGYIPGIRPGRQTAEFIERVLNRLTFGGAIYLSIVCVIPSVISGLL---GVRFTFGGT 404
Query: 418 SVLIIVGSIIELRRSYQAY 436
++LI+VG ++ + + +
Sbjct: 405 ALLIVVGVALDTVQQIEGH 423
>gi|429758185|ref|ZP_19290704.1| preprotein translocase, SecY subunit [Actinomyces sp. oral taxon
181 str. F0379]
gi|429173844|gb|EKY15353.1| preprotein translocase, SecY subunit [Actinomyces sp. oral taxon
181 str. F0379]
Length = 430
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 206/424 (48%), Gaps = 31/424 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ A++F ++RR+L T ++ + R+G FIP PG D + + + S+ +L
Sbjct: 1 MLSAFAQAFRTPDLRRKLLFTLFIMAMFRLGSFIPTPGVDSQAVTKCIAQQSDASLLDLV 60
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQTGQMKLTQYTRYLT 120
Query: 132 LGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+ IL++ + + +++A S+SV ++ ++ G + W+ + I+E
Sbjct: 121 IFLGILQSTTIISLARSGNLFAGCSEKIIPSNSVWTFLLMMIVMTAGTGVIMWLGELITE 180
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLL--GSSVRWWPFMLGLLGVFTIVTMWAVVV 242
G G G SL+I +T +M SQLL G S +W + ++G+ +V++ V +
Sbjct: 181 RGIGNGMSLLI-------FTSITARMPSQLLTIGQSGKWGA-VFAIIGLMLVVSIVVVYL 232
Query: 243 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
+ R++ +QY K R+ T YIP IN SG+ PV+ + LLAFP +LA
Sbjct: 233 EQAQRRIPVQYA--KRMIGRRQYGGTTT---YIPLKINMSGVIPVIFASSLLAFPPMLAQ 287
Query: 303 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMG 360
GS Q K + + W Y T YA F F I P E+AD + + G
Sbjct: 288 -FGS---QDSKWVQWISANFHQDAWPYLTSYALLTLFFTFFYTAITFDPDEVADNMKRYG 343
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
IP + G+ T ++L + G L L I+A ++ L G T++L
Sbjct: 344 GFIPGYRAGRPTADFLRYVMNRITTAGALYLVIVALIPSLAIIPLHISQGQMPFGGTTLL 403
Query: 421 IIVG 424
II+G
Sbjct: 404 IIIG 407
>gi|242243967|ref|ZP_04798410.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
W23144]
gi|416125862|ref|ZP_11596209.1| preprotein translocase subunit secY [Staphylococcus epidermidis
FRI909]
gi|418631112|ref|ZP_13193582.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU128]
gi|420175801|ref|ZP_14682231.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM061]
gi|420176622|ref|ZP_14683030.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM057]
gi|420181224|ref|ZP_14687428.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM053]
gi|420191488|ref|ZP_14697404.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM023]
gi|420199195|ref|ZP_14704875.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM031]
gi|242232600|gb|EES34912.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
W23144]
gi|319400605|gb|EFV88830.1| preprotein translocase subunit secY [Staphylococcus epidermidis
FRI909]
gi|374835880|gb|EHR99476.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU128]
gi|394242488|gb|EJD87879.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM061]
gi|394246924|gb|EJD92175.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM053]
gi|394252465|gb|EJD97499.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM057]
gi|394266521|gb|EJE11153.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM023]
gi|394272351|gb|EJE16813.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM031]
Length = 430
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 209/423 (49%), Gaps = 24/423 (5%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--AEL 80
F E+R ++F T ++VI +IG +IP PG + S G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS--QGATELLNTFGGGALK 66
Query: 81 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +++
Sbjct: 67 RFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFIQS 126
Query: 140 VIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 127 IGMAFQFNNYLKGQLIIEQSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFA 186
Query: 198 GILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +QY
Sbjct: 187 GILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPIQY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QHV 312
K SA R S T Y+P +N +G+ PV+ P L W Q++
Sbjct: 246 A--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNI 299
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ NP +++G +Y + F + + + P+++AD L K G+ +P ++PG+ T
Sbjct: 300 ADTANPSSNIGM--IIYVVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGEQT 355
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+Y+T++ F G + L+ +A I ++ + + IG TS+LI++G IE ++
Sbjct: 356 KKYITRVLYRLTFVGSIFLAAIAILPIIATKFM-GLPQSIQIGGTSLLIVIGVAIETMKT 414
Query: 433 YQA 435
+A
Sbjct: 415 LEA 417
>gi|297545310|ref|YP_003677612.1| preprotein translocase subunit SecY [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296843085|gb|ADH61601.1| preprotein translocase, SecY subunit [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 418
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 208/430 (48%), Gaps = 31/430 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 80
+IR+R+ T V++VI R+G IP+PG D ++I + G G F GA
Sbjct: 12 DDIRKRILYTVVMLVIFRLGSHIPVPGIDSKVIAN-----ILGQGQLFGFFDIISGGAFS 66
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+ F + I+P I ASI+MQ+L +PSL Q+ KEG +G +KI Y ++++ A+++A+
Sbjct: 67 SFTIFAMSITPYINASIIMQLLTIAIPSLEQMAKEGEEGRKKIAQYTRYLTVVLALIQAI 126
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ I S+ +++T L G + W+ + I+E+G G GSSLII GI+
Sbjct: 127 GMTIGLRKAVINPTFFSLTVIVIT---LTAGTAFLMWLGERITENGIGNGSSLIIFAGII 183
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
+ +Y + + + + ++ ++ + ++ TEG R++ +QY A
Sbjct: 184 SRIPNMIYMTAEYVRAGTANIFGAIAFVVAELLMIVL-IILATEGQRRIPVQY-----AK 237
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILNPE 319
+IP IN +G+ P++ LL FP LA+ S F+ V+ L+
Sbjct: 238 RVVGRKVYGGQSTHIPIRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQRWLSTS 297
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLT 377
+Y + + F F A + P EI+D L K G IP ++PG+ T EYLT
Sbjct: 298 G------LIYNILDILLIIGFTYFYTAVIFNPVEISDNLKKYGGFIPGIRPGRPTTEYLT 351
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYN 437
KI F G L L+ +AT IL +R G T++LI VG ++ + + +
Sbjct: 352 KILNRVTFVGALFLAFIATMPVIL---MRITGLQLYFGGTALLIAVGVALDTMKQVEGHL 408
Query: 438 VMPSLSKALR 447
+M + L+
Sbjct: 409 IMRNYQGFLK 418
>gi|268316428|ref|YP_003290147.1| preprotein translocase subunit SecY [Rhodothermus marinus DSM 4252]
gi|262333962|gb|ACY47759.1| preprotein translocase, SecY subunit [Rhodothermus marinus DSM
4252]
Length = 438
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 217/428 (50%), Gaps = 35/428 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
E+R+R+ T L+V+ R+G ++ LPG D ++ + + ++ L D GA +
Sbjct: 15 EELRQRVLYTLGLLVVYRLGTYVTLPGVDAHILAEVNRQAGTNNLFGLIDLFVGGAFSQA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
F LGI P I ASI++Q++ +VP +L++EG +G KI ++++ L+AV
Sbjct: 75 GIFALGIMPYITASIIIQLMGAVVPYFQKLQREGEEGRRKITQLTRYLTVAITALQAVGY 134
Query: 143 ACYSLPYSIYAASHSVK---HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
A +L Y + V +++ +L G + + W+ + I+E+G G G SLII V I
Sbjct: 135 AI-NLRYGATGQAIVVSPAFFMLIAVIVLTAGTVFVMWLGERITENGIGNGISLIIMVSI 193
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
+ + +Y +++ F++ L L VF ++T V+VT+G R++ +QY K
Sbjct: 194 IAFLPQAVYNEF------TLKDNLFIVLLELAVFVVITAGVVLVTQGTRRIPVQYA--KR 245
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILN 317
R +T+ Y+P +N +G+ P++ ++ P+ +A+ GS F Q +
Sbjct: 246 VVGRRVYGGVTQ---YLPLRVNAAGVMPIIFAQSIMFVPATIATFFPGSDFMQQFGSFFS 302
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEY 375
+ W Y +++ V F F IA P+E+AD L + G IP V+PGK T E+
Sbjct: 303 DISG-----WGYSSLFFLLVVFFTYFYTAIAVNPREMADTLKRQGGFIPGVRPGKQTSEF 357
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLRR--INEGFS--IGFTSVLIIVGSIIELRR 431
+ I G + L I+A I+ + R + GF+ G TS+LIIVG +++ +
Sbjct: 358 IDTILTRITLPGAIFLGIVA----IIPAFAMRAGVTAGFAHFFGGTSLLIIVGVMLDTLQ 413
Query: 432 SYQAYNVM 439
+++ +M
Sbjct: 414 QIESHLLM 421
>gi|294675879|ref|YP_003576494.1| preprotein translocase subunit SecY [Rhodobacter capsulatus SB
1003]
gi|294474699|gb|ADE84087.1| preprotein translocase, SecY subunit [Rhodobacter capsulatus SB
1003]
Length = 456
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 204/426 (47%), Gaps = 35/426 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS---GSVDELGDFGAELKL 82
+++R R+F T L++I R+G +IP+PG D + +D++ S G + + GA ++
Sbjct: 21 TDLRARIFFTIGLLIIYRLGTYIPVPGIDADAL-RDFMERASQGIGGMLSMFTGGALGRM 79
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
F LGI P I ASI++Q++ +VP+L Q++KEG G +KI + ++G A +A
Sbjct: 80 GVFALGIMPYISASIIVQLMTALVPALEQMKKEGEQGRKKINQITRYSTVGLATFQA--- 136
Query: 143 ACYSLPYSIY---AASHSVKH---VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
+ L S+Y A+ +V H ++ LV G M + W+ + I+ G G G SLII
Sbjct: 137 --WGLATSLYNGGMATDAVPHLFFIVSVVVTLVGGTMFLMWLGEQITARGIGNGVSLIIF 194
Query: 197 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
VGI+ +Q + P +G+L + V + V + RK+ +QY
Sbjct: 195 VGIVAEIPAAAASFFAQGRAAGNSSIPVTIGVLVMMIAVIAFVVFMERALRKIHIQYPRR 254
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---PFWQHVK 313
++ + S ++P +NP+G+ P + + LL P+ +++ G P +
Sbjct: 255 QVGMKIYDGS-----SSHLPIKVNPAGVIPAIFASSLLLLPTTISTFSGDNTGPIMSTIL 309
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL---PKEIADYLNKMGARIPNVKPGK 370
P +P +Y YA + F F AN+ E+AD L G IP ++PGK
Sbjct: 310 AYFGP-----GQP-LYLAFYAGMIVFFAYFYTANVTFKSDEVADNLKNQGGFIPGIRPGK 363
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
T +YL + A G L+++ TIL L F G TSVLI+V ++
Sbjct: 364 KTEDYLDYVVARILVIGSAYLALVCLLPTILQTEL---GVPFYFGGTSVLIVVSVTMDTI 420
Query: 431 RSYQAY 436
Q++
Sbjct: 421 NQVQSH 426
>gi|338534515|ref|YP_004667849.1| preprotein translocase subunit SecY [Myxococcus fulvus HW-1]
gi|337260611|gb|AEI66771.1| preprotein translocase subunit SecY [Myxococcus fulvus HW-1]
Length = 462
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 208/439 (47%), Gaps = 36/439 (8%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDEL 73
LN A F +E+R RL T L+ + RIG FI PG DR + D G V
Sbjct: 17 LNAFANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVSLF 76
Query: 74 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
F GA ++S F LGI P + ASI+MQ+L +VPSL +L+KEG G +KI Y + +
Sbjct: 77 NLFSGGALEQMSIFGLGIMPYVSASIIMQLLAVVVPSLERLQKEGAGGRQKINQYTRYGT 136
Query: 132 LGFAILEAVIVACY--SLPYS---------IYAASHSVKHVMVTAFLLVCGAMTMSWICD 180
+ ++++ + ++ + SL S + SV +T L G + W+ +
Sbjct: 137 IALSVVQGIGISRWLASLGRSDGGQSGFNQVVVPDDSVWFTFMTVVSLTAGTAFIMWLGE 196
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I+E G G G SLII GI+ G ++L L V +L L+ VF ++ + AV
Sbjct: 197 RITERGIGNGISLIIFAGIVAGLLPGAKQLLD-LTRQDVISVAEVLALV-VFMLIIIAAV 254
Query: 241 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V V G R++ +QY A Y P +N SG+ P + +L+FP+
Sbjct: 255 VYVERGMRRIPIQY-----AKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGAVLSFPAT 309
Query: 300 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLN 357
L + PF Q + ++ W+Y ++ V F F A P ++AD +
Sbjct: 310 LGTWF--PFLQGFQR------AIEGNLWIYNGLFVLMVIFFAYFYTALTFRPDDVADNIK 361
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++PG+ T E++ ++ F G + LS++ +++ L F+ G T
Sbjct: 362 KQGGYIPGIRPGRQTAEFIERVLNRLTFGGAIYLSVICVIPSVISGLL---GVRFTFGGT 418
Query: 418 SVLIIVGSIIELRRSYQAY 436
++LI+VG ++ + + +
Sbjct: 419 ALLIVVGVALDTVQQIEGH 437
>gi|336315940|ref|ZP_08570845.1| preprotein translocase, SecY subunit [Rheinheimera sp. A13L]
gi|335879786|gb|EGM77680.1| preprotein translocase, SecY subunit [Rheinheimera sp. A13L]
Length = 442
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 212/437 (48%), Gaps = 32/437 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++ RL + I++ R+G F+P+PG D ++ Q + G++ E+ + GA +
Sbjct: 16 SELKTRLLFVLLAIIVFRLGSFVPIPGIDAAVLAQLFEQ-QKGTIVEMFNMFSGGALERA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +LG AI++A+ +
Sbjct: 75 SVFALGIMPYISASIIVQLLTVVHPTLAELKKEGEAGKRKINQYTRYGTLGLAIVQAIGI 134
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + + + + LV G M + W+ + I+E G G G SL+I GI+
Sbjct: 135 ST-GLPNLMPGLVVNPGIGFTITAVISLVTGTMFLMWLGEQITERGIGNGISLLIFTGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLA 259
G+ + + + Q + + +L +G + W VV E G R++ + Y A
Sbjct: 194 AGFPSAIGQTIEQARQGDLHF--LLLLAIGAIVVAVTWFVVFFERGQRRIVVNY-----A 246
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS------PFWQHVK 313
+ ++P +N +G+ P + + ++ FP +AS GS F Q V
Sbjct: 247 KRQQGRQVFAAQSSHLPLKVNMAGVIPPIFASSIILFPGTIASWFGSGEGMVANFLQEVA 306
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
L+P +P +Y +YA + F F A + P++ AD L K GA IP ++PG+
Sbjct: 307 LTLSP-----GQP-LYMVLYAAAIIFFCFFYTALVFNPRDTADNLKKSGAFIPGIRPGEQ 360
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +Y+ K+ G ++ + + + + N F G TS+LIIV I++
Sbjct: 361 TSKYIDKVMTRLTLAGAAYITFIC---LVPEFMMVAWNVQFYFGGTSLLIIVVVIMDFMA 417
Query: 432 SYQAYNVMPSLSKALRR 448
Q + + L++
Sbjct: 418 QVQTHLMSHQYESVLKK 434
>gi|405351431|ref|ZP_11022914.1| Preprotein translocase secY subunit [Chondromyces apiculatus DSM
436]
gi|397093322|gb|EJJ24045.1| Preprotein translocase secY subunit [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 462
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 208/439 (47%), Gaps = 36/439 (8%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDEL 73
LN A F +E+R RL T L+ + RIG FI PG DR + D G V
Sbjct: 17 LNAFANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVSLF 76
Query: 74 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
F GA ++S F LGI P + ASI+MQ+L +VPSL +L+KEG G +KI Y + +
Sbjct: 77 NLFSGGALEQMSIFGLGIMPYVSASIIMQLLAVVVPSLERLQKEGAGGRQKINQYTRYGT 136
Query: 132 LGFAILEAVIVACY--SLPYS---------IYAASHSVKHVMVTAFLLVCGAMTMSWICD 180
+ +I++ + ++ + SL S + SV +T L G + W+ +
Sbjct: 137 IALSIVQGIGISRWLASLGRSDGGQSGFNQVVVPDDSVWFTFMTVVSLTAGTAFIMWLGE 196
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I+E G G G SLII GI+ G ++L L V +L L+ VF ++ + AV
Sbjct: 197 RITERGIGNGISLIIFAGIVAGLLPGAKQLLD-LTRQDVISVAEVLALV-VFMLIIIAAV 254
Query: 241 VVTE-GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V E G R++ +QY A Y P +N SG+ P + +L+FP+
Sbjct: 255 VYVERGMRRIPIQY-----AKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGAVLSFPAT 309
Query: 300 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLN 357
L + PF Q + ++ W+Y ++ V F F A P ++AD +
Sbjct: 310 LGTWF--PFLQGFQR------AIEGNLWIYNGLFVVMVIFFAYFYTALTFRPDDVADNIK 361
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++PG+ T E++ ++ F G + LS++ +++ L F+ G T
Sbjct: 362 KQGGYIPGIRPGRQTAEFIERVLNRLTFGGAIYLSVVCVIPSVISGLL---GVRFTFGGT 418
Query: 418 SVLIIVGSIIELRRSYQAY 436
++LI+VG ++ + + +
Sbjct: 419 ALLIVVGVALDTVQQIEGH 437
>gi|119025359|ref|YP_909204.1| preprotein translocase subunit SecY [Bifidobacterium adolescentis
ATCC 15703]
gi|118764943|dbj|BAF39122.1| preprotein translocase SecY subunit [Bifidobacterium adolescentis
ATCC 15703]
Length = 457
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 206/429 (48%), Gaps = 24/429 (5%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++ E+R ++ T +I+I RIG FIP PG D ++ Q + S + +G
Sbjct: 18 QALKTKELRNKILFTLGIIIIYRIGSFIPTPGVDYTVVQQCVGKMNNASENFIGLVNLFS 77
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 78 GGAMLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGLA 137
Query: 136 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+L++ + A ++ S SV +++V ++ G + W+ + +++ G G
Sbjct: 138 VLQSTTILVTARSGALFNYQCSQVVPDGSVWNLVVMVLIMTGGTGLIMWMAELVTDKGLG 197
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
QG S++I + I +G+ L+++ G+ W F ++G ++ + + V R+
Sbjct: 198 QGMSILIFMSICSGFLPQLWEIGWGTNGTDGNWGKFA-AVVGTLLVIMILVIYVELAQRR 256
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY + S Y+P IN SG+ P + + +LA P+++A G+
Sbjct: 257 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAVPTLIAQ-FGNSD 310
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNV 366
VK I N + W Y +YA + F F +I P E AD + + G IP +
Sbjct: 311 QSWVKWI-NSNLANTTSVW-YIALYALMIVFFCFFYTEITFNPDETADNMKQYGGFIPGI 368
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+ G AT YL+ + G + L +A T+L L +N G T++LII G
Sbjct: 369 RAGSATSNYLSYVMNRLNTVGAVYLLFVALIPTVLIMAL-NLNTKLPFGGTTILIIAGVG 427
Query: 427 IELRRSYQA 435
++ R +A
Sbjct: 428 LDTLRQAKA 436
>gi|254421758|ref|ZP_05035476.1| preprotein translocase, SecY subunit [Synechococcus sp. PCC 7335]
gi|196189247|gb|EDX84211.1| preprotein translocase, SecY subunit [Synechococcus sp. PCC 7335]
Length = 437
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 223/436 (51%), Gaps = 37/436 (8%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDR----RLIPQDYLSFVSGS 69
+A E+F + + +R RL VT L+V+ R+G +IP+PG DR + V G
Sbjct: 10 SAQETFLQMAQAAGLRSRLLVTIGLLVLVRLGIYIPVPGIDRAAFSNFVQGGGAGGVLGF 69
Query: 70 VDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIW 128
+D +G G L + F LGI P I ASI+MQ+L +P+L L+K EG G KI
Sbjct: 70 LDIIGGGGLSL-VGIFALGILPFINASIIMQLLTAAIPALEDLQKNEGEAGRRKISQVTR 128
Query: 129 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+++ G+ I+++ +++C+ L +A V V+ T L G+M + W+ + I+E G G
Sbjct: 129 YVAFGWTIVQSTMLSCFLL--RDFAYDFGVPFVIETVIALTAGSMFVMWVGELITERGLG 186
Query: 189 QGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G+SL+I + I++ L + L+Q S +L L+ + TI+ + V V EG
Sbjct: 187 NGASLLIFLNIVSSLPRVLGETVDLAQTGDRSTIGGIVILFLVFIATIIGI--VFVQEGT 244
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEP--YIPFNINPSGMQPVLTTTYLLAFP-SILASI 303
R++ + SA R+ +E Y+P +N G+ P++ + +L P S++ I
Sbjct: 245 RRIPI-------VSARRQVGRKLYLEKSNYLPLRLNQGGVMPIIFASSMLIIPISLVQYI 297
Query: 304 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGA 361
F + + + A +Y +Y + F+ F + P++++ L KMGA
Sbjct: 298 PSEAFARFMN------ANFRATSPLYILVYLVMIVFFSYFYASLVVNPEDMSRNLKKMGA 351
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVL 420
IP ++PG+AT Y++K+ F G + L ++A ++++ R + +GF G TS+L
Sbjct: 352 SIPGIRPGRATTNYISKVLNRLTFLGAIFLGLVAVVPSLVESATRVQTFQGF--GATSLL 409
Query: 421 IIVGSIIELRRSYQAY 436
I+VG I+ + Q Y
Sbjct: 410 ILVGVAIDTAKQIQTY 425
>gi|22297643|ref|NP_680890.1| preprotein translocase subunit SecY [Thermosynechococcus elongatus
BP-1]
gi|22293820|dbj|BAC07652.1| preprotein translocase SecY subunit [Thermosynechococcus elongatus
BP-1]
Length = 436
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 214/437 (48%), Gaps = 40/437 (9%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL +T L+++ R+G ++P+PG DR + Q+ ++
Sbjct: 10 TAQETFMQMAQAAGLRGRLLITIGLLILVRLGIYLPIPGIDRAVFAQNVQDNAVIRFLDI 69
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 132
G L F LGI P I ASI+MQ+L +PSL +L+K EG G KI ++++
Sbjct: 70 FAGGGLSALGIFALGILPYINASIIMQLLTAALPSLERLQKDEGEAGRRKISQITRYVAV 129
Query: 133 GFAILEAVIVACY--SLPYSIYAASHSVKHVMVTAFL-LVCGAMTMSWICDTISESGFGQ 189
G+A+L++ +A + S+P AA H + L L G+M + WI + I+E G G
Sbjct: 130 GWAVLQSFGIAIFVSSIPG---AALHPGPWFVAEIVLGLTAGSMVVMWISELITERGVGN 186
Query: 190 GSSLIICVGILT------GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 243
G+SL+I + I+ G T L + + G ++ L+ VF + + V V
Sbjct: 187 GASLLIFLSIVAYLPASVGQTIALAESGGNIGGIAI--------LVAVFLAMIVGIVFVQ 238
Query: 244 EGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
EG R++ + SA R+ E Y+P +N G+ P++ + +L PS LA
Sbjct: 239 EGTRRIPI-------VSARRQVGRKLYREQTSYLPLRLNQGGVMPIIFASAVLILPSTLA 291
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKM 359
S ++P G PW+Y Y + F+ F + P +++ L KM
Sbjct: 292 QFTRSELVARFASYVSPA---GPTPWLYVIFYLLLILFFSYFYSSLVVNPVDMSQNLKKM 348
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
GA IP ++PGKAT +YL ++ F G + L ++A T ++ ++ +G TS+
Sbjct: 349 GASIPGIRPGKATSDYLERVLNRLTFLGAIFLGLVAIIPTAVESA-TKVTTFQGLGATSL 407
Query: 420 LIIVGSIIELRRSYQAY 436
LI+VG I+ + Q Y
Sbjct: 408 LILVGVAIDTSKQIQTY 424
>gi|375086482|ref|ZP_09732889.1| preprotein translocase, SecY subunit [Megamonas funiformis YIT
11815]
gi|374564827|gb|EHR36107.1| preprotein translocase, SecY subunit [Megamonas funiformis YIT
11815]
Length = 418
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 208/423 (49%), Gaps = 33/423 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
+E+R+++ T ++ + R+G IP+PG + +I Q F SG++ L D GA K
Sbjct: 12 TELRQKIVFTLIMFAVFRLGTHIPVPGVNPSVIEQ---LFNSGNLFGLLDLFSGGALSKF 68
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F + I+P I ASI++Q+L +VP+L Q KEG +GH+KI ++++ A L+A+
Sbjct: 69 SLFAMSITPYINASIIIQLLTVVVPTLEQWSKEGEEGHKKITKTTRYLTVVLAFLQAI-- 126
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
S+ + S+ +++ A L G + + WI + I+ G G G SLII GI+
Sbjct: 127 -GMSIGLKQAIINPSITSILIIAITLTAGTVFLMWIGEQITAHGVGNGISLIIFAGIVAA 185
Query: 203 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV----VTEGCRKVKLQYYGFKL 258
+ L + + L ++ ++ + F I+ + +V + +G R+V + Y
Sbjct: 186 LPQNLGTIYNYLQAGTISYFNVLF-----FAIIALAMIVFVIAIQQGQRRVPVSY----- 235
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
A +IP +N +G+ P++ + +L FP+ LA + +P+ + + +
Sbjct: 236 AKRVVGRKTYGGQSTHIPLKVNQAGVIPIIFASSVLMFPATLAQFVQTPWIKTIADYFQW 295
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIANLPK--EIADYLNKMGARIPNVKPGKATIEYL 376
T + +YA + F F A K ++AD L K G IP ++PG+AT +YL
Sbjct: 296 GTPFQS------AVYALLILFFTYFYTAVTFKIPDLADNLKKYGGFIPGIRPGQATADYL 349
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+I G L+ +A T++ EG G T++LI+VG ++ + ++
Sbjct: 350 DRIMTRITLAGAFFLAFIAILPTMIAGATHI--EGIHFGGTALLIVVGVALDTMKQIESM 407
Query: 437 NVM 439
VM
Sbjct: 408 VVM 410
>gi|289579123|ref|YP_003477750.1| preprotein translocase subunit SecY [Thermoanaerobacter italicus
Ab9]
gi|289528836|gb|ADD03188.1| preprotein translocase, SecY subunit [Thermoanaerobacter italicus
Ab9]
Length = 418
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 208/430 (48%), Gaps = 31/430 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 80
+IRRR+ T V+++I R+G IP+PG D ++I + G G F GA
Sbjct: 12 DDIRRRILYTVVMLIIFRLGSHIPVPGIDSKVIAN-----ILGQGQLFGFFDIISGGAFS 66
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+ F + I+P I ASI+MQ+L +PSL Q+ KEG +G +KI Y ++++ A+++A+
Sbjct: 67 SFTIFAMSITPYINASIIMQLLTIAIPSLEQMAKEGEEGRKKIAQYTRYLTVVLALIQAI 126
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ I ++ +++T L G + W+ + I+E+G G GSSLII GI+
Sbjct: 127 GMTIGLRRAVINPTFFNLTVIVIT---LTAGTAFLMWLGERITENGIGNGSSLIIFAGII 183
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
+ +Y + + + + ++ ++ + ++ TEG R++ +QY A
Sbjct: 184 SRIPNMIYMTAEYVRAGTANIFGAIAFVVAELLMIVL-IILATEGQRRIPVQY-----AK 237
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILNPE 319
+IP IN +G+ P++ LL FP LA+ S F+ V+ L+
Sbjct: 238 RVVGRKVYGGQSTHIPIRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQRWLSTS 297
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLT 377
+Y + + F F A + P EI+D L K G IP ++PG+ T EYLT
Sbjct: 298 G------LIYNILDILLIIGFTYFYTAVIFNPVEISDNLKKYGGFIPGIRPGRPTTEYLT 351
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYN 437
KI F G L L+ +AT IL +R G T++LI VG ++ + + +
Sbjct: 352 KILNRITFVGALFLAFIATMPVIL---MRITGLQLYFGGTALLIAVGVALDTMKQVEGHL 408
Query: 438 VMPSLSKALR 447
+M + L+
Sbjct: 409 IMRNYQGFLK 418
>gi|338734005|ref|YP_004672478.1| preprotein translocase subunit secY [Simkania negevensis Z]
gi|336483388|emb|CCB89987.1| preprotein translocase subunit secY [Simkania negevensis Z]
Length = 457
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 224/457 (49%), Gaps = 46/457 (10%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF---G 77
F E+++++ T ++++ RIG +IP+PG + + Q + G + +L D G
Sbjct: 9 FALPELKQKIVFTLAMLLVCRIGAYIPVPGINGDEVVQIFRQMTGGGQNLLQLVDVFSGG 68
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLV-QLRKEGLDGHEKIKSYIWWISLGFAI 136
A K++ LG+ P I ASI+MQVL +VPS+ ++R+ G G K+ I ++ A+
Sbjct: 69 AFAKMTIIALGVMPYISASIIMQVLVAVVPSMQREIRENGEAGKRKMGKMIRIATVFLAL 128
Query: 137 LEAVIVACYSLPYSIYAASHSVKHV-------------MVTAFLLVCGAMTMSWICDTIS 183
++ ++A Y+L ++ V + +V F + G + + W+ + I+
Sbjct: 129 FQSALLAKYALSLNVAHPGVIVDQLINVQIGGFPWLFYLVIMFAMSAGTLFLMWVGEQIT 188
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVR----WWPFMLGLLGVFTIVTMWA 239
E G G G SLII +GIL TL ++SQL S + ++ L VF ++ +
Sbjct: 189 ERGIGNGISLIITIGILASLPMTLGSIVSQLNLDSQEPGQLTFSSIVILSIVFVLIIIGT 248
Query: 240 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVE---PYIPFNINPSGMQPVLTTTYLLAF 296
++V +G RK+ LQY AR E + +IP +N +G+ PV+ + LL F
Sbjct: 249 ILVIQGTRKIPLQY--------ARRVVGRHETQGGSSHIPLKVNYAGVIPVIFASSLLMF 300
Query: 297 PSILASILGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIA 353
P+ +A +G W +V L+P + WVY T++ + F F A P+ IA
Sbjct: 301 PATIAQFIGRGNWLSNVVMWLSPGS------WVYTTLFVLLIMFFTYFWTATQFHPEXIA 354
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS 413
+ K GA IP ++ GK T E+L G + L+ +A T++ L ++ S
Sbjct: 355 SDMKKNGAFIPGIRQGKPTQEFLESTMNRITLAGSVFLAFIAILPTLVGKIL-GVDASIS 413
Query: 414 --IGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
G TS+LI+VG +++ + +++ +M +++
Sbjct: 414 HFFGGTSLLILVGVVLDTTKQIESHLLMKRYDGFMKK 450
>gi|242371877|ref|ZP_04817451.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
M23864:W1]
gi|242350384|gb|EES41985.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
M23864:W1]
Length = 430
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 209/423 (49%), Gaps = 24/423 (5%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--AEL 80
F E+R ++F T ++VI +IG +IP PG + S G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS--QGATELLNTFGGGALK 66
Query: 81 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +++
Sbjct: 67 RFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFIQS 126
Query: 140 VIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 127 IGMAFQFNNYLKGQLIIDKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFA 186
Query: 198 GILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
GIL+ ++ + L +S+ W ++GL+ ++T+ A+ V E RK+ +QY
Sbjct: 187 GILSTLPSSIEQFGQSLFVGQDDTSLAWLK-IVGLVVALILLTVGAIFVLEAKRKIPIQY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QHV 312
K SA R S T Y+P +N +G+ PV+ P L W Q++
Sbjct: 246 A--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNI 299
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ NP +++G VY + F + + + P+++AD L K G+ +P ++PG+ T
Sbjct: 300 ADTANPSSNIGM--IVYIVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGEQT 355
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+Y+TK+ F G + L+ +A I ++ + + IG TS+LI++G IE ++
Sbjct: 356 KKYITKVLYRLTFVGSIFLAAIAILPIIATKFM-GLPQSIQIGGTSLLIVIGVAIETMKT 414
Query: 433 YQA 435
+A
Sbjct: 415 LEA 417
>gi|188587684|ref|YP_001919692.1| preprotein translocase subunit SecY [Clostridium botulinum E3 str.
Alaska E43]
gi|251777942|ref|ZP_04820862.1| preprotein translocase, SecY subunit [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|188497965|gb|ACD51101.1| preprotein translocase, SecY subunit [Clostridium botulinum E3 str.
Alaska E43]
gi|243082257|gb|EES48147.1| preprotein translocase, SecY subunit [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 426
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 215/442 (48%), Gaps = 41/442 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F SE+R++ F +L+ + R+G IP+PG I +YL +S S L
Sbjct: 1 MLQTLRNAFKVSELRKKFFWIILLVAVFRMGSHIPVPG-----INAEYLKSISQSGGLLS 55
Query: 75 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
+ GA + S F LG+ P I ASI+MQ+L +P L QL KEG DG +KI++ +
Sbjct: 56 FYDLLSGGAFSRFSIFALGVMPYINASIIMQLLTVAIPQLEQLSKEGEDGRKKIQNATRY 115
Query: 130 ISLGFAILEAVIVACYSLPYSIYA------ASHSVK--HVMVTAFLLVCGAMTMSWICDT 181
+SLG + + L + IYA A+ +K ++V F LV G+ W+ D
Sbjct: 116 VSLGISFI---------LAFGIYATISNSGATAGIKTSEMLVIIFALVVGSTFCMWLGDQ 166
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
++ +G G G+S++I V I++ T+ + + +V + L F + + +V+
Sbjct: 167 LTVNGIGNGTSILIFVNIVSRIPMTMGSIAASKQAGNVS--IIEIALFAAFFVALLASVL 224
Query: 242 -VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
+ R++ +QY G A + +IP +I S + ++ ++ FP +
Sbjct: 225 YFSLAERRIPVQYAG----KAVGGSKMMRNQTSHIPLSIIGSAVIAIIFAMSVMDFPRTI 280
Query: 301 ASILGSPFWQHVKEILNPETSV-GARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLN 357
A+ + + W IL +T V + W+Y +YA F F I P E+A+ L+
Sbjct: 281 ATFVPNKSW--AMWILTNKTCVFNSESWMYIVLYAILTLFFTWFYTQITFKPDEMAENLH 338
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K IP V+PG+AT Y +I GG L +ILA + TI+ +Y N FS T
Sbjct: 339 KSTGFIPGVRPGEATTRYFERILNRVSVIGGTLAAILAVTPTIVQNYTEFKNISFS--GT 396
Query: 418 SVLIIVGSIIELRRSYQAYNVM 439
++LII+G ++ R ++ M
Sbjct: 397 ALLIIIGVALDFNRQVESQMTM 418
>gi|152978161|ref|YP_001343790.1| preprotein translocase subunit SecY [Actinobacillus succinogenes
130Z]
gi|150839884|gb|ABR73855.1| preprotein translocase, SecY subunit [Actinobacillus succinogenes
130Z]
Length = 441
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 209/435 (48%), Gaps = 30/435 (6%)
Query: 26 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
+E++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 NELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLSQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + +LG A L+A+ +
Sbjct: 76 SIFALGIMPYISASIIIQLLATVSPTLGELRKEGESGRRKISKYTRYATLGLATLQAIGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLL-GVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 259
G + + + Q + P +L L+ V VT + V V G R++K++Y A
Sbjct: 195 AGLPSAIGQTIEQ--ARQGQMHPLVLLLIAAVVFAVTYFVVFVERGQRRIKVEY-----A 247
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 315
+ + ++P +N + + P + + ++ FP+ L S G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMASVMPAIFASSIILFPATLVSWFGESSSLEWLTNLSMM 307
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
L P +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 308 LQP-----GQP-IYLIVYAIAIMFFSFFYSAMQFNPRDTADNLKKSGAFIPGIRPGEQTS 361
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
Y+ KI GGL + + I+ + N F G TS+LI+V I++
Sbjct: 362 RYIDKIMTRLTLIGGLYVVFVCLVPYIM---MSAWNVQFYFGGTSLLIVVVVIMDFIAQI 418
Query: 434 QAYNVMPSLSKALRR 448
Q++ + AL++
Sbjct: 419 QSHLMSSKYESALKK 433
>gi|154486767|ref|ZP_02028174.1| hypothetical protein BIFADO_00592 [Bifidobacterium adolescentis
L2-32]
gi|154084630|gb|EDN83675.1| preprotein translocase, SecY subunit [Bifidobacterium adolescentis
L2-32]
Length = 445
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 206/429 (48%), Gaps = 24/429 (5%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++ E+R ++ T +I+I RIG FIP PG D ++ Q + S + +G
Sbjct: 6 QALKTKELRNKILFTLGIIIIYRIGSFIPTPGVDYTVVQQCVGKMNNASENFIGLVNLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGAMLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGLA 125
Query: 136 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+L++ + A ++ S SV +++V ++ G + W+ + +++ G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCSQVVPDGSVWNLVVMVLIMTGGTGLIMWMAELVTDKGLG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
QG S++I + I +G+ L+++ G+ W F ++G ++ + + V R+
Sbjct: 186 QGMSILIFMSICSGFLPQLWEIGWGTNGTDGNWGKFA-AVVGTLLVIMILVIYVELAQRR 244
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY + S Y+P IN SG+ P + + +LA P+++A G+
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAVPTLIAQ-FGNSD 298
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNV 366
VK I N + W Y +YA + F F +I P E AD + + G IP +
Sbjct: 299 QSWVKWI-NSNLANTTSVW-YIALYALMIVFFCFFYTEITFNPDETADNMKQYGGFIPGI 356
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+ G AT YL+ + G + L +A T+L L +N G T++LII G
Sbjct: 357 RAGSATSNYLSYVMNRLNTVGAVYLLFVALIPTVLIMAL-NLNTKLPFGGTTILIIAGVG 415
Query: 427 IELRRSYQA 435
++ R +A
Sbjct: 416 LDTLRQAKA 424
>gi|418607973|ref|ZP_13171191.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU057]
gi|374403134|gb|EHQ74143.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU057]
Length = 430
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 208/423 (49%), Gaps = 24/423 (5%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--AEL 80
F E+R ++F T ++VI +IG +IP PG + S G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS--QGATELLNTFGGGALK 66
Query: 81 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ +++
Sbjct: 67 RFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILVFIQS 126
Query: 140 VIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 127 IGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFA 186
Query: 198 GILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +QY
Sbjct: 187 GILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPIQY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QHV 312
K SA R S T Y+P +N +G+ PV+ P L W Q++
Sbjct: 246 A--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNI 299
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ NP +++G +Y + F + + + P+++AD L K G+ +P ++PG+ T
Sbjct: 300 ADTANPSSNIGM--IIYVVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGEQT 355
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+Y+TK+ F G + L+ +A I ++ + + IG TS+LI++G IE ++
Sbjct: 356 KKYITKVLYRLTFVGSIFLAAIAILPIIATKFM-GLPQSIQIGGTSLLIVIGVAIETMKT 414
Query: 433 YQA 435
+A
Sbjct: 415 LEA 417
>gi|289550163|ref|YP_003471067.1| preprotein translocase subunit SecY [Staphylococcus lugdunensis
HKU09-01]
gi|315659207|ref|ZP_07912071.1| preprotein translocase subunit SecY [Staphylococcus lugdunensis
M23590]
gi|385783738|ref|YP_005759911.1| preprotein translocase subunit SecY [Staphylococcus lugdunensis
N920143]
gi|418415058|ref|ZP_12988265.1| preprotein translocase subunit secY [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|418635872|ref|ZP_13198230.1| preprotein translocase, SecY subunit [Staphylococcus lugdunensis
VCU139]
gi|289179695|gb|ADC86940.1| Preprotein translocase secY subunit [Staphylococcus lugdunensis
HKU09-01]
gi|315495632|gb|EFU83963.1| preprotein translocase subunit SecY [Staphylococcus lugdunensis
M23590]
gi|339893994|emb|CCB53241.1| preprotein translocase SecY subunit [Staphylococcus lugdunensis
N920143]
gi|374841357|gb|EHS04830.1| preprotein translocase, SecY subunit [Staphylococcus lugdunensis
VCU139]
gi|410875831|gb|EKS23746.1| preprotein translocase subunit secY [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 430
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 206/424 (48%), Gaps = 23/424 (5%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 78
SFF + E+R ++F T +++I +IG +IP PG + P + G L FG A
Sbjct: 7 SFFTTKEVRNKIFFTLAMLIIFKIGTYIPAPGVNPE--PFAHQGSDQGVAALLNTFGGGA 64
Query: 79 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
S F +GI P I ASI+MQ+L IVP + K+G G K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGEVGKRKLSNVTRYFAIILAFV 124
Query: 138 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+++ +A Y + SV ++ A +L G + W+ D I++ G G G S+II
Sbjct: 125 QSIGMAFQFNNYLGGKLVINQSVMSYLLIAIVLTTGTAFLIWLGDQITQFGVGNGISIII 184
Query: 196 CVGILTGYTETLYKMLSQLL---GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
GIL+ ++ + Q + W ++GL+ ++T+ A+ V E RK+ +Q
Sbjct: 185 FAGILSTLPSSIIQFAQQAFVGNDDTTLAWLKVIGLVVGLILLTIGAIYVLEAKRKIPIQ 244
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QH 311
Y K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 245 YA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKADWAQT 298
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKA 371
+ + NP + G VY + F + + + P+++AD L K G+ +P ++PG
Sbjct: 299 ISQTANPSNTYGM--IVYVVLIIAFTYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGDQ 354
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +Y+TK+ F G + L+++A + ++ + + IG TS+LI++G IE +
Sbjct: 355 TKKYITKVLYRLTFVGSIFLAVIAILPILATKFM-SLPQSIQIGGTSLLIVIGVAIETMK 413
Query: 432 SYQA 435
S +A
Sbjct: 414 SLEA 417
>gi|444913354|ref|ZP_21233506.1| Preprotein translocase secY subunit [Cystobacter fuscus DSM 2262]
gi|444715974|gb|ELW56834.1| Preprotein translocase secY subunit [Cystobacter fuscus DSM 2262]
Length = 448
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 208/443 (46%), Gaps = 44/443 (9%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 75
LN A F +E+R RL T +L+ + RIG FI PG DR + +F+ G
Sbjct: 3 LNAFANVFRIAELRSRLIYTLMLLAVYRIGIFINTPGVDRAAMN----AFMDAQRQSGGL 58
Query: 76 F--------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 127
F GA ++S F LGI P + ASI++Q+L +VPSL +L+KEG G +KI Y
Sbjct: 59 FSLFNLFSGGALNQMSIFGLGIMPYVSASIIIQLLAVVVPSLERLQKEGAGGRQKINQYT 118
Query: 128 WWISLGFAILEAVIVACY--SLPYSIYAASHSVKHVMV----------TAFLLVCGAMTM 175
+ ++ + ++ + ++ + SL S A V+V T L G +
Sbjct: 119 RYGTIVLSTIQGIGISRWLASLGRS-DAGQSGFNQVVVPNDNLWFTFMTVISLTAGTAFI 177
Query: 176 SWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIV 235
W+ + I+E G G G SLII GI+ G + K L L+ V +L LL V
Sbjct: 178 MWLGERITERGIGNGISLIIFAGIVAGLLPS-GKTLLDLVQQEVVSMAAVLALLVFMVGV 236
Query: 236 TMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLA 295
V V G R++ +QY A Y P +N +G+ P + +L+
Sbjct: 237 VAVVVYVERGMRRIPVQY-----AKRMAGRRMFAGQATYFPMKVNTAGVIPPIFAGAILS 291
Query: 296 FPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIA 353
FP+ L + PF Q ++ S+ + PWVY ++ F+ F F A P ++A
Sbjct: 292 FPATLGTWF--PFLQGLQR------SIESSPWVYNGLFVLFIVFFAFFYTALTFRPDDVA 343
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS 413
D + K G IP ++PG+ T +++ + F G + L+ + +I+ + L N F+
Sbjct: 344 DNIKKQGGYIPGIRPGRQTADFIEGVLNRITFGGAIYLAAICVIPSIITNLL---NVRFT 400
Query: 414 IGFTSVLIIVGSIIELRRSYQAY 436
G T++LI+VG ++ + + +
Sbjct: 401 FGGTALLIVVGVALDTVQQIEGH 423
>gi|182412032|ref|YP_001817098.1| preprotein translocase subunit SecY [Opitutus terrae PB90-1]
gi|177839246|gb|ACB73498.1| preprotein translocase, SecY subunit [Opitutus terrae PB90-1]
Length = 500
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 215/437 (49%), Gaps = 36/437 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ---DYLSFVSGSVDELGDF---GAEL 80
E+R R+F T L+ ++R+G IPLPG D + + D + GS+ L + GA
Sbjct: 13 ELRSRIFYTLALLFVARVGANIPLPGIDPGPLQKFFADQTASGGGSLVGLYNMFTGGALT 72
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE-A 139
K + LGI P I ASI+ Q++ +VP L +L++EG G +K+ Y + ++ I++ A
Sbjct: 73 KGAVCALGIMPYISASIIFQLMTAVVPMLSRLQQEGDVGRQKLTQYTRYATVAICIVQGA 132
Query: 140 VIVACYSLPYSIYAASH-----------SVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+++ P ++ + ++ + + G + + W+ + I++ G G
Sbjct: 133 LLILALENPGRLFPGYDIGTYGSIVIVSKLSFLITSVVFMTAGTLVLMWLGEQITQRGIG 192
Query: 189 QGSSLIICVGILT---GYTETLYKMLSQLLGSSVRW-WPFMLGLLGVFTIVTMWAVVVTE 244
G SL+I VGIL G Y++ + +G+ P + ++ +F V M ++V +
Sbjct: 193 NGVSLLITVGILADIPGAAAQTYQLFFKPVGTGPNLGLPQAVIMIALFVAVVMGIIMVVQ 252
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
G RK+ +QY A + + ++P +N SG+ PV+ + +L FP + S L
Sbjct: 253 GQRKIPVQY-----AKRVVGNKVMGGQSSFLPLKVNYSGVMPVIFASAILLFPQQIFSQL 307
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGAR 362
G+ F ++K ++ ++ W YY IY + F+ F ++ + P +IAD L K G
Sbjct: 308 GAAF--NIKFLIEFSQNLLRGHWTYYAIYTTLILFFSYFWVSVMFKPIQIADDLKKYGGY 365
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL---RRINEGFSIGFTSV 419
+P V+PG+ T +L I G + L+I+A +L L +RI F G T +
Sbjct: 366 VPGVRPGEPTARFLDFIMTRLTLAGAVFLTIIAVMPDVLLFELNVPQRIAIFF--GGTGM 423
Query: 420 LIIVGSIIELRRSYQAY 436
LI VG +++ R + +
Sbjct: 424 LITVGVVLDTMRQVETF 440
>gi|365174477|ref|ZP_09361925.1| preprotein translocase, SecY subunit [Synergistes sp. 3_1_syn1]
gi|363615033|gb|EHL66505.1| preprotein translocase, SecY subunit [Synergistes sp. 3_1_syn1]
Length = 431
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 223/441 (50%), Gaps = 24/441 (5%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L++ ++F +++RR+ T + + R+G +P PG D + + F G++
Sbjct: 1 MLDSFRDTFRLPDLKRRILFTLAALFVYRLGAHVPTPGVDAAALGK---LFDQGTLLGFL 57
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
D GA + S F LG++P I +SI+MQ+L +VPS+ +++KEG +G +KI + + +
Sbjct: 58 DLFAGGALSRFSIFALGVTPYINSSIVMQLLAVVVPSIEKMQKEGEEGRKKIVQWTRYGT 117
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+ FA ++AV + + IY S + +++ + L GA+ + W+ + +S+ G G G
Sbjct: 118 IVFAFIQAVGMTGWLRGLGIY--SGGMLDIILVSLTLTTGAVAVMWLGEIMSDHGIGNGI 175
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SL+I GI+ E + + +S + + +L ++ + V V++ EG R++ +
Sbjct: 176 SLLIFAGIVVRIPEAIIRTVSLVRLGEMNVLVMLLAII-IMVAVIAGCVMLQEGQRRLPV 234
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
QY A + +IP +N +G+ P++ + +L FP +A + +
Sbjct: 235 QY-----AKRMVGNKMYGGQSSFIPLRVNTAGVIPIIFASSVLLFPYTIAGLFQHSIARM 289
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 369
+++ ++P + +Y +Y + F+ F A + P++I++ + K G I ++PG
Sbjct: 290 IQQAMSPSSP------IYMILYVLMIIFFSYFYTAVVFKPEDISNNMKKNGGFILGIRPG 343
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
K T +Y+ K+ G + L+++A T++ L IN F G T+V+I+VG ++
Sbjct: 344 KPTTDYIEKVMGRITLGGSIALAVIAIIPTVMTG-LMNINT-FYFGGTAVIIVVGVALDT 401
Query: 430 RRSYQAYNVMPSLSKALRRYG 450
+ +M L+R G
Sbjct: 402 VHQIEGQLLMRHYEGILKRRG 422
>gi|422743282|ref|ZP_16797274.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus MRSA177]
gi|320143502|gb|EFW35283.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus MRSA177]
Length = 430
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 221/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R+++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRKKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>gi|258422677|ref|ZP_05685582.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9635]
gi|417890904|ref|ZP_12534972.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21200]
gi|418283840|ref|ZP_12896577.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21202]
gi|418306861|ref|ZP_12918620.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21194]
gi|418560142|ref|ZP_13124664.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21252]
gi|418887466|ref|ZP_13441605.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1524]
gi|418992221|ref|ZP_13539866.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG290]
gi|257847088|gb|EEV71097.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9635]
gi|341853782|gb|EGS94662.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21200]
gi|365165751|gb|EHM57500.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21202]
gi|365246252|gb|EHM86822.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21194]
gi|371972853|gb|EHO90222.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21252]
gi|377749538|gb|EHT73486.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG290]
gi|377756079|gb|EHT79976.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1524]
Length = 430
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + S +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQSAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>gi|168004573|ref|XP_001754986.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694090|gb|EDQ80440.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 543
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 204/424 (48%), Gaps = 34/424 (8%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE---LGDF-- 76
FFK ++ + + +++SRIG +IPL G DR S GS+D LG
Sbjct: 122 DFFKGKLPEKFLILLGWLILSRIGTYIPLWGVDR--------SAFQGSIDTNSLLGTLNT 173
Query: 77 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISL 132
G+ +L LGI P I A I++Q+L + P L L +KEG G +K+ + W S+
Sbjct: 174 FSGGSIGRLGLASLGIVPFINAQIVVQLLGTVFPKLQDLQKKEGEAGRKKVLRWTKWASV 233
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
GF +++AV Y PY + SV+ + L GA+ I + IS+ G G+S
Sbjct: 234 GFGVIQAVGQVTYIRPYVM---DFSVEWAISAVAALTLGAVITMSIGEKISDLKLGNGTS 290
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
L+I I++ ++ + ++Q + +P + G +G F ++ + V V E RK+ +
Sbjct: 291 LLIFTNIVSYLPSSIGQTVAQAINDGN--YPGLAGSIGAFLLLVLGIVYVQEAERKIPIN 348
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
Y AS + S Y+PF +N SG+ P++ ++ LLA P+ A G F +
Sbjct: 349 Y-----ASRFKASSKGLGKSAYLPFKVNSSGVMPIIFSSSLLALPASAARFTGLSFLKDA 403
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
P S+ V + AFF + + + PK++++ L + GA IP+V+PGKAT
Sbjct: 404 AVAFYPNGSLYLPANVL--LIAFFNYFYTFLQLD--PKDVSEQLKRQGASIPSVRPGKAT 459
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELRR 431
++ G L I+A + +++ GF+ TSVLI+VGS + R
Sbjct: 460 AAFIETTLGRISVLGSAFLGIMALAPFLVEGVTHLTTFRGFA--GTSVLILVGSATDTAR 517
Query: 432 SYQA 435
QA
Sbjct: 518 KVQA 521
>gi|379796552|ref|YP_005326553.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|356873545|emb|CCE59884.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus MSHR1132]
Length = 430
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + S +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQSAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>gi|296126885|ref|YP_003634137.1| preprotein translocase subunit SecY [Brachyspira murdochii DSM
12563]
gi|296018701|gb|ADG71938.1| preprotein translocase, SecY subunit [Brachyspira murdochii DSM
12563]
Length = 446
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 218/459 (47%), Gaps = 43/459 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS----- 69
+L + A F E+R R+ T + I++ RIG IP PG D P L F+S S
Sbjct: 1 MLKSLANIFKVQELRSRILFTIIAILVYRIGSHIPTPGID----PAALLGFLSSSQGGAG 56
Query: 70 ---VDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 126
+ +L GA + S LGI P I ASI+MQ+L ++P+L +++KEG G +KI Y
Sbjct: 57 LLTIMDLFSGGALFRFSILALGIMPYISASIIMQLLGVVIPALERMQKEGESGRKKINQY 116
Query: 127 IWWISLGFAILEAVIVACYSLPYSIYA---ASHSVKHVMVTAFLLVCGAMTMSWICDTIS 183
+ +++L I+++ +A + + A + + +++ G M + W+ D I+
Sbjct: 117 VRYLTLVLCIVQSAAMASWIQSINEGAMIFMNPGIGFILLVVVTATAGTMFLMWLGDQIT 176
Query: 184 ESGFGQGSSLIICVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 239
E G G G S+II GI+ G + + K S+ L S V + L + + ++
Sbjct: 177 ERGLGNGISVIIFAGIVARIPAGVYDVIQKRESEYLNSLV------IVLFFIIFAIVIFC 230
Query: 240 VVVTE-GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 298
VV E G R++ +QY A +IPF INPSG+ P++ + L+A P+
Sbjct: 231 VVYEESGQRRIPVQY-----AKRVVGRKVFGAQSTHIPFKINPSGVIPIIFASALMAIPA 285
Query: 299 ILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYL 356
+AS+ W+ + +L S G+ W Y +Y V +F + P +IA+ L
Sbjct: 286 QIASLTRGVQWRWLDALLR-FFSYGS--WAYIILYCLLVIMFAYVYTSVQFNPDDIAENL 342
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHY-----LRRINEG 411
K G IP +PG T EYL + + G + L+ +A ++ R N
Sbjct: 343 KKSGGFIPGYRPGTQTAEYLKTVLSRITIGGSIFLAAIAVFPDLMSKIPIFAPFRGTNNS 402
Query: 412 --FSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+ +G TSV+I V +EL + ++Y M + L++
Sbjct: 403 LVYLMGGTSVMISVSVAVELLKQIESYLQMHNYDGILKK 441
>gi|158520745|ref|YP_001528615.1| preprotein translocase subunit SecY [Desulfococcus oleovorans Hxd3]
gi|158509571|gb|ABW66538.1| preprotein translocase, SecY subunit [Desulfococcus oleovorans
Hxd3]
Length = 429
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 210/447 (46%), Gaps = 47/447 (10%)
Query: 21 ESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--G 77
++ FK E++RR+ T ++ + RIG IP PG DR + + + + G + F G
Sbjct: 7 QNIFKIPELKRRILFTLSMLAVYRIGVMIPTPGIDREALARIFEAHKGGMLGMFNMFSGG 66
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
A +LS F LGI P I A+I++++L VP L QL+KEG G +K+ Y + ++ +I+
Sbjct: 67 ALEQLSVFALGIMPYISAAIILELLTVAVPYLEQLKKEGEQGRKKLTQYTRYGTVVLSII 126
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ ++A + ++T L G + W+ + I+E G G G SLII
Sbjct: 127 QGFLMAV-GIEKMGAVIDPGWSFRLMTVITLTAGTAFIMWLGEQITEKGIGNGISLIIFA 185
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV------TEGCRKVKL 251
GI+ ++ + ++ +S +G+ GV ++ VV +G R++ +
Sbjct: 186 GIVA-------RLPAAIINTSRMISTGDMGIFGVLILLVFMVAVVGVIIFMEQGQRRIPI 238
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
QY A ++P IN SG+ P + + ++ FP+ +A + PF Q
Sbjct: 239 QY-----AKRVVGRRMYGGQSTHLPLKINTSGVIPPIFASSIMMFPATMAGFVDVPFVQD 293
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 369
+ +L P W+Y + +F F F A P ++A+ + K G IP ++PG
Sbjct: 294 MSAVLMPGH------WIYNVFFVALIFFFCYFYTAVTFKPDDVAENMKKQGGYIPGIRPG 347
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE- 428
K T +Y+ ++ G ++ + TIL + + N F G T++LI+VG I+
Sbjct: 348 KRTADYIDRVLTRITLGGATYVAAVCVLPTIL---ISQFNVPFYFGGTALLIVVGVAIDT 404
Query: 429 --------LRRSYQAYNVMPSLSKALR 447
++RSY+ + L K +R
Sbjct: 405 TAQMESHMIQRSYEGF-----LKKGIR 426
>gi|269203863|ref|YP_003283132.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ED98]
gi|262076153|gb|ACY12126.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ED98]
Length = 430
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 221/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + ++ + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYSFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>gi|37520962|ref|NP_924339.1| preprotein translocase subunit SecY [Gloeobacter violaceus PCC
7421]
gi|35211957|dbj|BAC89334.1| preprotein translocase subunit [Gloeobacter violaceus PCC 7421]
Length = 433
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 219/452 (48%), Gaps = 49/452 (10%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 65
+A E+F + S +RRRL T L+V+SRIG +IPLP ++ Q +L+
Sbjct: 10 SAQETFAQMASASGLRRRLLFTLGLLVLSRIGIYIPLPEINQAAFQQATQNNAIIGFLNI 69
Query: 66 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 124
+G G L F LGI P I ASI+MQ+L + P L L+K EG G +I
Sbjct: 70 FAG--------GGFTTLGVFMLGILPYINASIIMQLLVPVFPKLEDLQKNEGEQGRRQIA 121
Query: 125 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
Y +++LG+AI++++ VA Y P+ A S V+ T L GA+ + W+ + I+E
Sbjct: 122 QYTRYLALGWAIIQSIGVAIYIKPF---VADWSPLFVIQTTLALTAGAIFVMWLGELITE 178
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G G+SL+I V I++ + L S R ++ LL ++ + V V E
Sbjct: 179 KGIGNGASLLIFVSIVSSLPTAFSQTFQLLQADSSRVAGVVVLLLVFLAMI-VGIVFVQE 237
Query: 245 GCRKVKLQYYGFKLASAAREDSP-----ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
G R++ + SA R+ P + Y+P +N G+ P++ + LL P
Sbjct: 238 GTRRIPI-------ISARRQVGPRRQQYQQQQTSYLPLRVNQGGVMPIIFASSLLYLPLT 290
Query: 300 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL---PKEIADYL 356
A + V +++N +S W++ +Y + F+ F A L P++++ L
Sbjct: 291 FAQFARNA---TVDQVVNAISS----GWIHNILYLVLILFFSFF-YATLIINPEDVSKNL 342
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
+MG+ IP V+PG AT EY+ K+ F G + LS +A T ++ I +G
Sbjct: 343 KRMGSSIPGVRPGTATSEYIAKVMNRLTFLGAIFLSAVAIIPTFVEQG-TGITTFNGLGA 401
Query: 417 TSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
TS+LI+VG I+ R Q Y + ++R
Sbjct: 402 TSLLILVGVAIDTVRQIQTYVISQRYEGMVKR 433
>gi|197303832|ref|ZP_03168868.1| hypothetical protein RUMLAC_02571 [Ruminococcus lactaris ATCC
29176]
gi|197297125|gb|EDY31689.1| preprotein translocase, SecY subunit [Ruminococcus lactaris ATCC
29176]
Length = 450
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 228/461 (49%), Gaps = 46/461 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F +IR+RL T +++V+ R G +P PG D I Q++ + +G D
Sbjct: 1 MLKTVRNAFKVEDIRKRLLYTLLMLVVVRFGSQLPTPGVDPTFI-QNFFAQQTG--DAFN 57
Query: 75 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
F G+ ++S F L I+P I +SI+MQ+L +P L +++K+G DG +KI + +
Sbjct: 58 FFEAFTGGSFTRMSVFALSITPYITSSIIMQLLTIAIPKLEEMQKDGEDGRKKIAAITRY 117
Query: 130 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC----GAMTMSWICDTISES 185
+++G A++E++ ++ V + V ++VC G+ + WI + I+E
Sbjct: 118 VTVGLALIESI-----AMSIGFGRQGLLVDYNFVNCAIVVCTLTAGSAFLMWIGERITEK 172
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVT 243
G G G S+++ + I++ + L + +Q + + G +L + +V ++ +++
Sbjct: 173 GVGNGISIVLLINIISRVPDDLVTLYTQFMSGKKLAKAGLAGIIILAILLVVIVFVIILQ 232
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
+G R++ +QY + + +IP +N +G+ PV+ ++ L+ P ++A
Sbjct: 233 DGERRIAVQY-----SKKVQGRKTYGGQSSHIPLKVNTAGVIPVIFSSSLMQTPIVIAQF 287
Query: 304 LGSPFWQHV-KEIL------------NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPK 350
LG + +IL NP S+G ++ TI FF + + I P
Sbjct: 288 LGKGNGTGIGSKILAGLNSNNWCDPENPIYSIGLVVYILLTI--FFAYFYT--SITFNPM 343
Query: 351 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-N 409
EIA+ + K G IP ++PGK T++YLTKI F G L I+ ++ ++ +
Sbjct: 344 EIANNMKKSGGFIPGIRPGKPTVDYLTKILNYIIFIGACGLIIVQ----VIPYFFNGVFG 399
Query: 410 EGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRYG 450
S G TS++IIVG ++E + ++ ++ + + L G
Sbjct: 400 ANVSFGGTSLIIIVGVVLETIKKIESQMLVRNYTGFLNNKG 440
>gi|254430806|ref|ZP_05044509.1| preprotein translocase, SecY subunit [Cyanobium sp. PCC 7001]
gi|197625259|gb|EDY37818.1| preprotein translocase, SecY subunit [Cyanobium sp. PCC 7001]
Length = 439
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/402 (31%), Positives = 201/402 (50%), Gaps = 29/402 (7%)
Query: 47 FIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQLGISPQIVASILMQVLCH 104
+IP+PG DR QD+LS + L F G L F LGI P I ASI++Q+L
Sbjct: 43 YIPVPGIDRVAF-QDFLSRGGQLIGFLDIFTGGGLSTLGVFALGILPFINASIIIQLLTA 101
Query: 105 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 163
+P L L+K EG G KI +++LG+ IL++ + A Y+ S V V+
Sbjct: 102 ALPQLEDLQKNEGEAGRRKIAQITRYVALGWGILQSTVFALILRQYATEGLSEPV-FVLQ 160
Query: 164 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP 223
TA LV G+M + WI + I+E G GQG+SL+I V I+ L + +L S R
Sbjct: 161 TALALVTGSMIVMWISEVITERGIGQGASLVIFVNIVATLPRALGSTI-ELAQSGDRSTV 219
Query: 224 FMLGLLGVFTIVTMWAVV-VTEGCRKV-----KLQYYGFKLASAAREDSPITEVEPYIPF 277
+ +L + ++T+ ++ V EG R++ K Q G L AAR+ Y+P
Sbjct: 220 GGIVVLVLVFLLTIVGIIFVQEGNRRIPIVSAKRQVGGVNLL-AARQS--------YLPL 270
Query: 278 NINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFV 337
+N G+ P++ + ++ P +A++ SP+ V LNP +S PW+Y ++ +
Sbjct: 271 KLNAGGVMPIIFASAVVFLPLTIANLTRSPWLIQVAGYLNPNSST---PWLYALVFFGLI 327
Query: 338 FLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILA 395
F+ F + P +IA L + G +P V+PG AT YL +Q G L L +A
Sbjct: 328 VGFSFFYASLTVNPVDIATNLKRGGVAVPGVRPGSATAAYLGGVQNRLTLLGALFLGAVA 387
Query: 396 TSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ ++ + R +G +G TS+LI+VG I+ + Q Y
Sbjct: 388 IIPSAVEGATQVRTFQG--LGATSLLILVGVAIDTAKQVQTY 427
>gi|418455628|ref|ZP_13026876.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS11a]
gi|418458504|ref|ZP_13029692.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS11b]
gi|387742523|gb|EIK29336.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS11a]
gi|387743730|gb|EIK30515.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS11b]
Length = 430
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGIYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>gi|163783354|ref|ZP_02178347.1| preprotein translocase SecY [Hydrogenivirga sp. 128-5-R1-1]
gi|159881462|gb|EDP74973.1| preprotein translocase SecY [Hydrogenivirga sp. 128-5-R1-1]
Length = 431
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 209/425 (49%), Gaps = 29/425 (6%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL 80
F ++RRR T + I R+G IP+PG D + +D+ + G++ L D G L
Sbjct: 9 FVFEDLRRRFLYTLFMFAIYRLGSHIPIPGVDVVAL-EDFFKAMQGTLFNLYDIFSGGNL 67
Query: 81 -KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILE 138
+++ F LG+ P I ASI+MQ+L +P L +L KE D G KI Y +++L A ++
Sbjct: 68 SRMTVFALGVMPYISASIMMQLLTVAIPELQRLAKEEGDYGRYKINEYTKYLTLFVAFVQ 127
Query: 139 AVIVACY----SLPYSIYAASHS-VKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
++ +A + + P + + V+ LV G M + W+ + I+E G G G SL
Sbjct: 128 SIGIAFWLQNQTSPRGFPVVPEAGFLFIFVSVMTLVAGTMFLVWMGERITEKGIGNGMSL 187
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFML-GLLGVFTIVTMWAVVVTEGCRKVKLQ 252
+I GI+ G+ + ++ +L S PF + G + + +V + V + E R++ +Q
Sbjct: 188 LIFAGIVAGFPNAVISLVDRL--RSGDLAPFAVAGAVVMVLLVIVGIVYIQEAERRIPVQ 245
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
Y R++ Y+P INP+G+ P++ LL PS + + + P Q +
Sbjct: 246 Y---PRRVVGRQEY--RGGSTYLPIKINPAGVIPIIFAQSLLIIPSSVLTFIQHPIAQVI 300
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGK 370
+ NP TS+ Y +Y + F F A + P E+AD L K GA IP V+PG
Sbjct: 301 YDAFNP-TSI-----FYNFLYVMLIVFFTYFYTAVMINPVEVADNLRKGGAFIPGVRPGL 354
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
T ++L + F G L LS++A + ++N F G T+ LI+VG ++
Sbjct: 355 ETQKFLETVINRLVFVGALFLSVVAIIPLFISL---QLNVPFYFGGTTALIVVGVALDTL 411
Query: 431 RSYQA 435
+ +A
Sbjct: 412 KQVEA 416
>gi|429123840|ref|ZP_19184372.1| preprotein translocase subunit SecY [Brachyspira hampsonii 30446]
gi|426280409|gb|EKV57424.1| preprotein translocase subunit SecY [Brachyspira hampsonii 30446]
Length = 446
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 215/454 (47%), Gaps = 43/454 (9%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS--------VD 71
A F E+R R+ T + I++ RIG IP PG D P L F+S S +
Sbjct: 6 ANIFRVQELRSRILFTVIAILVYRIGSHIPTPGID----PAALLGFLSSSQGGGGLLTIM 61
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+L GA + S LGI P I ASI+MQ+L ++P+L +++KEG G +KI Y+ +++
Sbjct: 62 DLFSGGALFRFSILALGIMPYISASIIMQLLGVVIPALERMQKEGESGRKKINQYVRYLT 121
Query: 132 LGFAILEAVIVACYSLPYSIYA---ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
L I+++ +A + + A + + +++ G M + W+ D I+E G G
Sbjct: 122 LVLCIVQSAAMASWIQSINEGAMIFMNPGIGFILLVVVTATAGTMFLMWLGDQITERGLG 181
Query: 189 QGSSLIICVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G S+II GI+ G + + K S+ L S V + L + + ++ VV E
Sbjct: 182 NGISVIIFAGIVARIPAGVYDVIQKRESEYLNSLV------IVLFFIIFAIVIFCVVYEE 235
Query: 245 -GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
G R++ +QY A +IPF INPSG+ P++ + L+A P+ +AS+
Sbjct: 236 SGQRRIPVQY-----AKRVVGRKVFGAQSTHIPFKINPSGVIPIIFASALMAIPAQIASL 290
Query: 304 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGA 361
W+ + +L S G+ W Y +Y V +F + P +IA+ L K G
Sbjct: 291 TRGVQWRWLDALLR-FFSYGS--WAYIILYCLLVIMFAYVYTSVQFNPDDIAENLKKSGG 347
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHY-----LRRINEG--FSI 414
IP +PG T EYL + + G + L+ +A ++ R N + +
Sbjct: 348 FIPGYRPGTQTAEYLKTVLSRITIGGSIFLAAIAVFPDLMSKIPIFAPFRGTNNSLVYLM 407
Query: 415 GFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
G TSV+I V +EL + ++Y M + L++
Sbjct: 408 GGTSVMISVSVAVELLKQIESYLQMHNYDGILKK 441
>gi|325294416|ref|YP_004280930.1| preprotein translocase subunit SecY [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064864|gb|ADY72871.1| preprotein translocase, SecY subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 442
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 208/438 (47%), Gaps = 30/438 (6%)
Query: 10 IRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS 69
+ LS + N E E+R+R T +L+ + R+G IP PG D + ++ G+
Sbjct: 1 MNLSKIFFNVTEV---PELRKRFIFTMLLLAVYRLGAHIPTPGIDVIAL-SEFFKRAQGT 56
Query: 70 VDELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKS 125
V D GA KL+ F LG+ P I ++I+MQ+L +PS+ +L KE G G KI
Sbjct: 57 VFGFMDVFSGGALSKLTIFALGVMPYISSAIIMQLLTVAIPSIEKLAKEEGEYGRRKINQ 116
Query: 126 YIWWISLGFAILEAVIVA----CYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICD 180
Y + ++ A ++A+ +A P I + + V L GA + W+ +
Sbjct: 117 YTRYGAVLLAFIQALGIAIGLESMKSPSGIPVVPNPGFTFMFVCVTCLTAGATFLMWLGE 176
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I+E G G G S++I GI+ + + + + + + ++ V
Sbjct: 177 KITEKGIGNGMSILIFAGIVASIPNAAITTFTLFKNGEISLFKIIGIISIILAMIAAI-V 235
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
+ E R+V LQY + A + + Y+P +NP+ + P++ +L FP+ +
Sbjct: 236 YIQEAERRVPLQYARRNIGRQA-----VGKYTSYLPIKLNPANVIPIIFAASVLMFPATI 290
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNK 358
+ +P Q + + L P +++ Y +YA +F F F A + P+EIA+ LNK
Sbjct: 291 VKFIHNPIAQAIYDALQPGSTL------YLIVYAVLIFFFTYFYTAIIFNPEEIAENLNK 344
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
G IP ++ G T +YL KI + F G + L+++A I+ +++ F G T+
Sbjct: 345 HGGFIPGIRAGTDTAKYLDKIVSRLTFAGAVFLTLVAIVPLIIT---QKMQLPFYFGGTA 401
Query: 419 VLIIVGSIIELRRSYQAY 436
+LI+VG ++ R +AY
Sbjct: 402 ILIVVGVALDTLRRMEAY 419
>gi|225621047|ref|YP_002722305.1| preprotein translocase subunit SecY [Brachyspira hyodysenteriae
WA1]
gi|384209992|ref|YP_005595712.1| preprotein translocase subunit SecY [Brachyspira intermedia PWS/A]
gi|189031319|gb|ACD74830.1| putative preprotein SecY translocase [Brachyspira hyodysenteriae
WA1]
gi|225215867|gb|ACN84601.1| preprotein translocase subunit SecY [Brachyspira hyodysenteriae
WA1]
gi|343387642|gb|AEM23132.1| preprotein translocase subunit SecY [Brachyspira intermedia PWS/A]
Length = 446
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 215/454 (47%), Gaps = 43/454 (9%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS--------VD 71
A F E+R R+ T + I++ RIG IP PG D P L F+S S +
Sbjct: 6 ANIFRVQELRSRILFTVIAILVYRIGSHIPTPGID----PTALLGFLSSSQGGGGLLTIM 61
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+L GA + S LGI P I ASI+MQ+L ++P+L +++KEG G +KI Y+ +++
Sbjct: 62 DLFSGGALFRFSILALGIMPYISASIIMQLLGVVIPALERMQKEGESGRKKINQYVRYLT 121
Query: 132 LGFAILEAVIVACYSLPYSIYA---ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
L I+++ +A + + A + + +++ G M + W+ D I+E G G
Sbjct: 122 LVLCIVQSAAMASWIQSINEGAMIFMNPGIGFILLVVVTATAGTMFLMWLGDQITERGLG 181
Query: 189 QGSSLIICVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G S+II GI+ G + + K S+ L S V + L + + ++ VV E
Sbjct: 182 NGISVIIFAGIVARIPAGVYDVIQKRESEYLNSLV------IVLFFIIFAIVIFCVVYEE 235
Query: 245 -GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
G R++ +QY A +IPF INPSG+ P++ + L+A P+ +AS+
Sbjct: 236 SGQRRIPVQY-----AKRVVGRKVFGAQSTHIPFKINPSGVIPIIFASALMAIPAQIASL 290
Query: 304 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGA 361
W+ + +L S G+ W Y +Y V +F + P +IA+ L K G
Sbjct: 291 TRGVQWRWLDALLR-FFSYGS--WAYIILYCLLVIMFAYVYTSVQFNPDDIAENLKKSGG 347
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHY-----LRRINEG--FSI 414
IP +PG T EYL + + G + L+ +A ++ R N + +
Sbjct: 348 FIPGYRPGTQTAEYLKTVLSRITIGGSIFLAAIAVFPDLMSKIPIFAPFRGTNNSLVYLM 407
Query: 415 GFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
G TSV+I V +EL + ++Y M + L++
Sbjct: 408 GGTSVMISVSVAVELLKQIESYLQMHNYDGILKK 441
>gi|387143935|ref|YP_005732329.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TW20]
gi|418955127|ref|ZP_13507075.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-189]
gi|269941819|emb|CBI50229.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus TW20]
gi|375371580|gb|EHS75350.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-189]
Length = 430
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGLAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>gi|402570856|ref|YP_006620199.1| protein translocase subunit SecY [Desulfosporosinus meridiei DSM
13257]
gi|402252053|gb|AFQ42328.1| protein translocase subunit secY/sec61 alpha [Desulfosporosinus
meridiei DSM 13257]
Length = 428
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 210/434 (48%), Gaps = 43/434 (9%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
+++R+++ T ++ +I RIG IP+P F I +D F SGS+ D G+ +L
Sbjct: 13 ADLRKKIGYTLLMFLIFRIGAHIPIP-FVNHDILKDM--FGSGSMMNFMDTISGGSFKRL 69
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILEAV 140
+ F L I+P I ASI++Q+L ++PSL +L KEG G +KI Y + ++LGF
Sbjct: 70 TVFALSITPYITASIILQLLTIVIPSLERLSKEGDYGRKKITQYTRYSTVALGF------ 123
Query: 141 IVACYSLPYSIYAA------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
+ + L Y I +A + ++ A +L G + W+ + I+E G G G SLI
Sbjct: 124 -IQAFGLTYGIRSALTIPSPAMQWPTYLLIALVLTAGTAFLMWVGEAITEKGIGNGISLI 182
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY 254
I GI++ L + L + ++GLL + +T + V EG R+V +QY
Sbjct: 183 IFAGIVSRVPSALASLWEMLRVGEINALS-IIGLLIIVVFITAGVIYVQEGQRRVTVQY- 240
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS-ILGSPFWQHVK 313
A +IP +N +G+ PV+ LLAFP +AS S F + V
Sbjct: 241 ----AKRVVGRRVYGGQSSHIPLKVNQAGVIPVIFAMSLLAFPQTIASWTPTSGFARFVS 296
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKA 371
+ S+ + P Y +Y + F F I P ++AD L K G IP ++PG+
Sbjct: 297 TWFSMNGSITSIP--YLLLYGALILFFTYFYTSITFNPVDVADNLKKYGGFIPGLRPGRP 354
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE--- 428
T EYLTK+ GGL L+++A T++ N F G TS+LI+VG ++
Sbjct: 355 TAEYLTKVLNRITLAGGLFLALIAVLPTLVIGLTGLKNIYF--GGTSLLIVVGVALDTMK 412
Query: 429 ------LRRSYQAY 436
+ R YQ +
Sbjct: 413 QIESQLMSRHYQGF 426
>gi|384862874|ref|YP_005745594.1| Sec family Type I general secretory pathway preprotein translocase
SecY_1 [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|302752103|gb|ADL66280.1| Sec family Type I general secretory pathway preprotein translocase
SecY_1 [Staphylococcus aureus subsp. aureus str.
JKD6008]
Length = 425
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 2 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 54
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 55 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 114
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 115 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 174
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 175 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 233
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 234 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 287
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 288 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 343
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 344 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 402
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 403 AIETMKSLEA 412
>gi|15925220|ref|NP_372754.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus Mu50]
gi|15927810|ref|NP_375343.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus N315]
gi|21283878|ref|NP_646966.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MW2]
gi|49484446|ref|YP_041670.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49487012|ref|YP_044233.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57650814|ref|YP_187029.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus COL]
gi|82751819|ref|YP_417560.1| preprotein translocase subunit SecY [Staphylococcus aureus RF122]
gi|87162195|ref|YP_494819.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88196142|ref|YP_500959.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268670|ref|YP_001247613.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus JH9]
gi|150394735|ref|YP_001317410.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus JH1]
gi|151222344|ref|YP_001333166.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156980545|ref|YP_001442804.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus Mu3]
gi|161510434|ref|YP_001576093.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221140168|ref|ZP_03564661.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253316991|ref|ZP_04840204.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253729896|ref|ZP_04864061.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253734361|ref|ZP_04868526.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH130]
gi|255007010|ref|ZP_05145611.2| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257423715|ref|ZP_05600144.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257429032|ref|ZP_05605419.1| translocase subunit SecY [Staphylococcus aureus subsp. aureus
68-397]
gi|257434639|ref|ZP_05610690.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M876]
gi|257794576|ref|ZP_05643555.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9781]
gi|258408822|ref|ZP_05681106.1| preprotein translocase subunit SecY [Staphylococcus aureus A9763]
gi|258422421|ref|ZP_05685333.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9719]
gi|258439810|ref|ZP_05690556.1| translocase subunit secY [Staphylococcus aureus A9299]
gi|258442634|ref|ZP_05691194.1| translocase subunit secY/sec61 alpha [Staphylococcus aureus A8115]
gi|258446667|ref|ZP_05694822.1| preprotein translocase subunit secY [Staphylococcus aureus A6300]
gi|258450215|ref|ZP_05698307.1| preprotein translocase, SecY subunit [Staphylococcus aureus A6224]
gi|258450774|ref|ZP_05698833.1| preprotein translocase, SecY subunit [Staphylococcus aureus A5948]
gi|258455413|ref|ZP_05703373.1| translocase subunit secY/sec61 alpha [Staphylococcus aureus A5937]
gi|262052022|ref|ZP_06024233.1| preprotein translocase SecY [Staphylococcus aureus 930918-3]
gi|282893668|ref|ZP_06301900.1| preprotein translocase, SecY subunit [Staphylococcus aureus A8117]
gi|282902133|ref|ZP_06310026.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C160]
gi|282906573|ref|ZP_06314421.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282909543|ref|ZP_06317354.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282915079|ref|ZP_06322856.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M899]
gi|282917575|ref|ZP_06325327.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus D139]
gi|282920805|ref|ZP_06328523.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C427]
gi|282922099|ref|ZP_06329795.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9765]
gi|282925710|ref|ZP_06333358.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C101]
gi|282926776|ref|ZP_06334403.1| preprotein translocase, SecY subunit [Staphylococcus aureus A10102]
gi|283767322|ref|ZP_06340237.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus H19]
gi|283959008|ref|ZP_06376449.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus A017934/97]
gi|284025256|ref|ZP_06379654.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus 132]
gi|293497483|ref|ZP_06665337.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 58-424]
gi|293511058|ref|ZP_06669755.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M809]
gi|293549664|ref|ZP_06672336.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M1015]
gi|294848763|ref|ZP_06789508.1| preprotein translocase [Staphylococcus aureus A9754]
gi|295404906|ref|ZP_06814719.1| preprotein translocase [Staphylococcus aureus A8819]
gi|295428813|ref|ZP_06821437.1| preprotein translocase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275979|ref|ZP_06858486.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MR1]
gi|297209957|ref|ZP_06926353.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297243964|ref|ZP_06927854.1| preprotein translocase [Staphylococcus aureus A8796]
gi|297589701|ref|ZP_06948342.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MN8]
gi|300910969|ref|ZP_07128419.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH70]
gi|304379414|ref|ZP_07362149.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379015354|ref|YP_005291590.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus VC40]
gi|379021895|ref|YP_005298557.1| pre protein translocase secY subunit [Staphylococcus aureus subsp.
aureus M013]
gi|384548437|ref|YP_005737690.1| preprotein translocase subunit [Staphylococcus aureus subsp. aureus
ED133]
gi|384551016|ref|YP_005740268.1| Sec family Type I general secretory pathway preprotein translocase
SecY_1 [Staphylococcus aureus subsp. aureus JKD6159]
gi|384865412|ref|YP_005750771.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|384866854|ref|YP_005747050.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH60]
gi|384870778|ref|YP_005753492.1| Preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus T0131]
gi|385782465|ref|YP_005758636.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus 11819-97]
gi|386729936|ref|YP_006196319.1| SecY protein [Staphylococcus aureus subsp. aureus 71193]
gi|386831802|ref|YP_006238456.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387603514|ref|YP_005735035.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus ST398]
gi|387781193|ref|YP_005755991.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus LGA251]
gi|404479524|ref|YP_006710954.1| preprotein translocase subunit SecY [Staphylococcus aureus
08BA02176]
gi|415684480|ref|ZP_11449589.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS00]
gi|415686925|ref|ZP_11450929.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS01]
gi|415692917|ref|ZP_11454808.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS03]
gi|417647898|ref|ZP_12297729.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21189]
gi|417652782|ref|ZP_12302520.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21172]
gi|417654898|ref|ZP_12304614.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21193]
gi|417795991|ref|ZP_12443208.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21305]
gi|417800510|ref|ZP_12447629.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21310]
gi|417801851|ref|ZP_12448933.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21318]
gi|417888259|ref|ZP_12532373.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21195]
gi|417893308|ref|ZP_12537343.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21201]
gi|417895465|ref|ZP_12539451.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21235]
gi|417898973|ref|ZP_12542885.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21259]
gi|417900885|ref|ZP_12544763.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21266]
gi|417903498|ref|ZP_12547342.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21269]
gi|418279661|ref|ZP_12892872.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21178]
gi|418287145|ref|ZP_12899777.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21209]
gi|418310911|ref|ZP_12922442.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21331]
gi|418314280|ref|ZP_12925758.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21334]
gi|418315650|ref|ZP_12927107.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21340]
gi|418319146|ref|ZP_12930532.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21232]
gi|418320123|ref|ZP_12931486.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus VCU006]
gi|418428285|ref|ZP_13001272.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS2]
gi|418431170|ref|ZP_13004069.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS3a]
gi|418435077|ref|ZP_13006926.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS4]
gi|418437844|ref|ZP_13009619.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS5]
gi|418440776|ref|ZP_13012460.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS6]
gi|418443746|ref|ZP_13015331.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS7]
gi|418446745|ref|ZP_13018205.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS8]
gi|418449834|ref|ZP_13021203.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS9]
gi|418452668|ref|ZP_13023989.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS10]
gi|418563490|ref|ZP_13127926.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21262]
gi|418564126|ref|ZP_13128551.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21264]
gi|418568396|ref|ZP_13132742.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21272]
gi|418572025|ref|ZP_13136240.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21283]
gi|418573055|ref|ZP_13137255.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21333]
gi|418577431|ref|ZP_13141529.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418580191|ref|ZP_13144277.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418595653|ref|ZP_13159251.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21342]
gi|418599459|ref|ZP_13162942.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21343]
gi|418601325|ref|ZP_13164761.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21345]
gi|418639989|ref|ZP_13202227.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-3]
gi|418642210|ref|ZP_13204405.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-24]
gi|418645251|ref|ZP_13207378.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-55]
gi|418648083|ref|ZP_13210133.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-88]
gi|418653597|ref|ZP_13215535.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-99]
gi|418657457|ref|ZP_13219224.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-105]
gi|418660062|ref|ZP_13221706.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-111]
gi|418663023|ref|ZP_13224551.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-122]
gi|418872402|ref|ZP_13426742.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-125]
gi|418876085|ref|ZP_13430333.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC93]
gi|418876437|ref|ZP_13430679.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418881918|ref|ZP_13436128.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418882192|ref|ZP_13436396.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418884841|ref|ZP_13438997.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418890030|ref|ZP_13444156.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418893009|ref|ZP_13447114.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418898818|ref|ZP_13452882.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418901797|ref|ZP_13455841.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418904594|ref|ZP_13458623.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|418907201|ref|ZP_13461219.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG149]
gi|418910060|ref|ZP_13464048.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG547]
gi|418912812|ref|ZP_13466786.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418915357|ref|ZP_13469322.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418918296|ref|ZP_13472245.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418921098|ref|ZP_13475022.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418923956|ref|ZP_13477862.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418926797|ref|ZP_13480687.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418932534|ref|ZP_13486360.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418946772|ref|ZP_13499181.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-157]
gi|418951262|ref|ZP_13503374.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-160]
gi|418980681|ref|ZP_13528455.1| SecY [Staphylococcus aureus subsp. aureus DR10]
gi|418983179|ref|ZP_13530881.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418984007|ref|ZP_13531702.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1500]
gi|418989261|ref|ZP_13536928.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1835]
gi|418989436|ref|ZP_13537100.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419774907|ref|ZP_14300860.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CO-23]
gi|419786221|ref|ZP_14311958.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-M]
gi|422746534|ref|ZP_16800466.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424774950|ref|ZP_18201951.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CM05]
gi|424786213|ref|ZP_18213004.1| Preprotein translocase secY subunit [Staphylococcus aureus CN79]
gi|440706674|ref|ZP_20887398.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21282]
gi|440735588|ref|ZP_20915191.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|443635909|ref|ZP_21120028.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21236]
gi|443640553|ref|ZP_21124541.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21196]
gi|448742562|ref|ZP_21724502.1| preprotein translocase subunit SecY [Staphylococcus aureus
KT/314250]
gi|448745026|ref|ZP_21726901.1| preprotein translocase subunit SecY [Staphylococcus aureus KT/Y21]
gi|81693972|sp|Q5HDX8.1|SECY_STAAC RecName: Full=Protein translocase subunit SecY
gi|83291316|sp|Q99S39.1|SECY_STAAM RecName: Full=Protein translocase subunit SecY
gi|83291322|sp|Q7A468.1|SECY_STAAN RecName: Full=Protein translocase subunit SecY
gi|83291332|sp|Q6GEK3.1|SECY_STAAR RecName: Full=Protein translocase subunit SecY
gi|83291339|sp|Q6G791.1|SECY_STAAS RecName: Full=Protein translocase subunit SecY
gi|83291348|sp|Q7A086.1|SECY_STAAW RecName: Full=Protein translocase subunit SecY
gi|110282999|sp|O08387.2|SECY_STAA8 RecName: Full=Protein translocase subunit SecY
gi|13702030|dbj|BAB43322.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus N315]
gi|14248003|dbj|BAB58392.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus Mu50]
gi|21205320|dbj|BAB96014.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus MW2]
gi|49242575|emb|CAG41296.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49245455|emb|CAG43932.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57285000|gb|AAW37094.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus COL]
gi|82657350|emb|CAI81791.1| preprotein translocase subunit [Staphylococcus aureus RF122]
gi|87128169|gb|ABD22683.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87203700|gb|ABD31510.1| preprotein translocase, SecY subunit, putative [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|147741739|gb|ABQ50037.1| protein translocase subunit secY/sec61 alpha [Staphylococcus aureus
subsp. aureus JH9]
gi|149947187|gb|ABR53123.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus JH1]
gi|150375144|dbj|BAF68404.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156722680|dbj|BAF79097.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus Mu3]
gi|160369243|gb|ABX30214.1| Sec family Type I general secretory pathway preprotein translocase
SecY [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253726343|gb|EES95072.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253727678|gb|EES96407.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH130]
gi|257272733|gb|EEV04835.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257279513|gb|EEV10100.1| translocase subunit SecY [Staphylococcus aureus subsp. aureus
68-397]
gi|257285235|gb|EEV15351.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M876]
gi|257788548|gb|EEV26888.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9781]
gi|257840505|gb|EEV64965.1| preprotein translocase subunit SecY [Staphylococcus aureus A9763]
gi|257841852|gb|EEV66289.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9719]
gi|257847586|gb|EEV71588.1| translocase subunit secY [Staphylococcus aureus A9299]
gi|257851755|gb|EEV75689.1| translocase subunit secY/sec61 alpha [Staphylococcus aureus A8115]
gi|257854735|gb|EEV77683.1| preprotein translocase subunit secY [Staphylococcus aureus A6300]
gi|257856307|gb|EEV79216.1| preprotein translocase, SecY subunit [Staphylococcus aureus A6224]
gi|257861557|gb|EEV84359.1| preprotein translocase, SecY subunit [Staphylococcus aureus A5948]
gi|257862624|gb|EEV85392.1| translocase subunit secY/sec61 alpha [Staphylococcus aureus A5937]
gi|259160077|gb|EEW45110.1| preprotein translocase SecY [Staphylococcus aureus 930918-3]
gi|282312539|gb|EFB42943.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C101]
gi|282315220|gb|EFB45604.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C427]
gi|282318537|gb|EFB48895.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus D139]
gi|282320800|gb|EFB51134.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M899]
gi|282326522|gb|EFB56824.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282329472|gb|EFB58993.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282591227|gb|EFB96300.1| preprotein translocase, SecY subunit [Staphylococcus aureus A10102]
gi|282593567|gb|EFB98560.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9765]
gi|282596592|gb|EFC01551.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C160]
gi|282763726|gb|EFC03854.1| preprotein translocase, SecY subunit [Staphylococcus aureus A8117]
gi|283461201|gb|EFC08285.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus H19]
gi|283471452|emb|CAQ50663.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus ST398]
gi|283788600|gb|EFC27427.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290918711|gb|EFD95787.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M1015]
gi|291096414|gb|EFE26672.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466045|gb|EFF08574.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M809]
gi|294824142|gb|EFG40566.1| preprotein translocase [Staphylococcus aureus A9754]
gi|294969851|gb|EFG45869.1| preprotein translocase [Staphylococcus aureus A8819]
gi|295127162|gb|EFG56804.1| preprotein translocase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296885630|gb|EFH24567.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297178742|gb|EFH37987.1| preprotein translocase [Staphylococcus aureus A8796]
gi|297578212|gb|EFH96925.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MN8]
gi|298695486|gb|ADI98708.1| preprotein translocase subunit [Staphylococcus aureus subsp. aureus
ED133]
gi|300887949|gb|EFK83144.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH70]
gi|302333866|gb|ADL24059.1| Sec family Type I general secretory pathway preprotein translocase
SecY_1 [Staphylococcus aureus subsp. aureus JKD6159]
gi|304341946|gb|EFM07850.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312437359|gb|ADQ76430.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH60]
gi|312830579|emb|CBX35421.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129690|gb|EFT85681.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS03]
gi|315193482|gb|EFU23878.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS00]
gi|315198240|gb|EFU28571.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS01]
gi|320140232|gb|EFW32091.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus MRSA131]
gi|329314913|gb|AEB89326.1| Preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus T0131]
gi|329723493|gb|EGG60022.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21172]
gi|329730338|gb|EGG66728.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21193]
gi|329732075|gb|EGG68430.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21189]
gi|334270404|gb|EGL88809.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21305]
gi|334271056|gb|EGL89451.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21310]
gi|334276112|gb|EGL94380.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21318]
gi|341841593|gb|EGS83046.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21235]
gi|341846654|gb|EGS87845.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21266]
gi|341846902|gb|EGS88090.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21259]
gi|341849912|gb|EGS91048.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21269]
gi|341855504|gb|EGS96349.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21201]
gi|341856092|gb|EGS96935.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21195]
gi|344178295|emb|CCC88781.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus LGA251]
gi|359831204|gb|AEV79182.1| Pre protein translocase secY subunit [Staphylococcus aureus subsp.
aureus M013]
gi|364523454|gb|AEW66204.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365164569|gb|EHM56483.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21209]
gi|365170314|gb|EHM61339.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21178]
gi|365227827|gb|EHM69014.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus VCU006]
gi|365233906|gb|EHM74848.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21334]
gi|365235701|gb|EHM76612.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21331]
gi|365241399|gb|EHM82145.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21232]
gi|365243090|gb|EHM83781.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21340]
gi|371970728|gb|EHO88144.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21262]
gi|371977226|gb|EHO94504.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21264]
gi|371977724|gb|EHO94984.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21283]
gi|371979625|gb|EHO96851.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21272]
gi|371983142|gb|EHP00289.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21333]
gi|374364051|gb|AEZ38156.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus VC40]
gi|374396775|gb|EHQ68000.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21343]
gi|374398791|gb|EHQ69945.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21345]
gi|374400754|gb|EHQ71860.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21342]
gi|375015607|gb|EHS09254.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-3]
gi|375017258|gb|EHS10879.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-24]
gi|375018785|gb|EHS12355.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-99]
gi|375023605|gb|EHS17055.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-55]
gi|375027348|gb|EHS20712.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-88]
gi|375030621|gb|EHS23931.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-105]
gi|375033165|gb|EHS26370.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-111]
gi|375035016|gb|EHS28155.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-122]
gi|375367244|gb|EHS71211.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-125]
gi|375373664|gb|EHS77326.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-160]
gi|375377422|gb|EHS80890.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-157]
gi|377698754|gb|EHT23101.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377699313|gb|EHT23659.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377700856|gb|EHT25189.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377702057|gb|EHT26382.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377707603|gb|EHT31895.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377709606|gb|EHT33858.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377713383|gb|EHT37591.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377715548|gb|EHT39737.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377718101|gb|EHT42273.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377725887|gb|EHT49999.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377727874|gb|EHT51976.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG547]
gi|377728783|gb|EHT52879.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377729542|gb|EHT53634.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377737201|gb|EHT61211.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377739221|gb|EHT63227.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377740507|gb|EHT64503.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377745150|gb|EHT69126.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377748223|gb|EHT72184.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377753184|gb|EHT77101.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377758855|gb|EHT82736.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377760031|gb|EHT83910.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG149]
gi|377766134|gb|EHT89967.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377767813|gb|EHT91599.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC93]
gi|377768582|gb|EHT92360.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC348]
gi|377772708|gb|EHT96454.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC128]
gi|379991540|gb|EIA13011.1| SecY [Staphylococcus aureus subsp. aureus DR10]
gi|383360867|gb|EID38253.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-M]
gi|383971306|gb|EID87385.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CO-23]
gi|384231229|gb|AFH70476.1| SecY [Staphylococcus aureus subsp. aureus 71193]
gi|385197194|emb|CCG16840.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387715918|gb|EIK03984.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS2]
gi|387716410|gb|EIK04468.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS3a]
gi|387723620|gb|EIK11353.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS4]
gi|387725016|gb|EIK12646.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS5]
gi|387728108|gb|EIK15607.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS6]
gi|387733057|gb|EIK20254.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS8]
gi|387734050|gb|EIK21206.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS7]
gi|387734377|gb|EIK21530.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS9]
gi|387741948|gb|EIK28772.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS10]
gi|402347052|gb|EJU82119.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CM05]
gi|404441013|gb|AFR74206.1| preprotein translocase SecY subunit [Staphylococcus aureus
08BA02176]
gi|408424154|emb|CCJ11565.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408426143|emb|CCJ13530.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408428131|emb|CCJ15494.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408430120|emb|CCJ27285.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408432107|emb|CCJ19422.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408434101|emb|CCJ21386.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408436094|emb|CCJ23354.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408438077|emb|CCJ25320.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|421955482|gb|EKU07820.1| Preprotein translocase secY subunit [Staphylococcus aureus CN79]
gi|436430468|gb|ELP27830.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436506825|gb|ELP42584.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21282]
gi|443405074|gb|ELS63686.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21196]
gi|443408725|gb|ELS67242.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21236]
gi|445546721|gb|ELY15007.1| preprotein translocase subunit SecY [Staphylococcus aureus
KT/314250]
gi|445561642|gb|ELY17834.1| preprotein translocase subunit SecY [Staphylococcus aureus KT/Y21]
Length = 430
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>gi|387151353|ref|YP_005742917.1| Preprotein translocase secY subunit [Staphylococcus aureus
04-02981]
gi|285817892|gb|ADC38379.1| Preprotein translocase secY subunit [Staphylococcus aureus
04-02981]
Length = 430
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTQKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>gi|445062100|ref|ZP_21374535.1| preprotein translocase subunit SecY [Brachyspira hampsonii 30599]
gi|444506495|gb|ELV06822.1| preprotein translocase subunit SecY [Brachyspira hampsonii 30599]
Length = 446
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 214/454 (47%), Gaps = 43/454 (9%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS--------VD 71
A F E+R R+ T + I++ RIG IP PG D P L F+S S +
Sbjct: 6 ANIFRVQELRSRILFTVIAILVYRIGSHIPTPGID----PTALLGFLSSSQGGGGLLTIM 61
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+L GA + S LGI P I ASI+MQ+L ++P+L +++KEG G +KI Y+ +++
Sbjct: 62 DLFSGGALFRFSILALGIMPYISASIIMQLLGVVIPALERMQKEGESGRKKINQYVRYLT 121
Query: 132 LGFAILEAVIVACYSLPYSIYA---ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
L I+++ +A + + A + +++ G M + W+ D I+E G G
Sbjct: 122 LVLCIVQSAAMASWIQSINEGAMIFMDPGIGFILLVVVTATAGTMFLMWLGDQITERGLG 181
Query: 189 QGSSLIICVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G S+II GI+ G + + K S+ L S V + L + + ++ VV E
Sbjct: 182 NGISVIIFAGIVARIPAGVYDVIQKRESEYLNSLV------IVLFFIIFAIVIFCVVYEE 235
Query: 245 -GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
G R++ +QY A +IPF INPSG+ P++ + L+A P+ +AS+
Sbjct: 236 SGQRRIPVQY-----AKRVVGRKVFGAQSTHIPFKINPSGVIPIIFASALMAIPAQIASL 290
Query: 304 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGA 361
W+ + +L S G+ W Y +Y V +F + P +IA+ L K G
Sbjct: 291 TRGVQWRWLDALLR-FFSYGS--WAYIILYCLLVIMFAYVYTSVQFNPDDIAENLKKSGG 347
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHY-----LRRINEG--FSI 414
IP +PG T EYL + + G + L+ +A ++ R N + +
Sbjct: 348 FIPGYRPGTQTAEYLKTVLSRITIGGSIFLAAIAVFPDLMSKIPIFAPFRGTNNSLVYLM 407
Query: 415 GFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
G TSV+I V +EL + ++Y M + L++
Sbjct: 408 GGTSVMISVSVAVELLKQIESYLQMHNYDGILKK 441
>gi|145346074|ref|XP_001417520.1| IISP family transporter: preprotein translocase SecY subunit
[Ostreococcus lucimarinus CCE9901]
gi|144577747|gb|ABO95813.1| IISP family transporter: preprotein translocase SecY subunit
[Ostreococcus lucimarinus CCE9901]
Length = 423
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 205/435 (47%), Gaps = 28/435 (6%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GA 78
FF ++ ++ L+V+SR+G +IP+ G DR + G + D G+
Sbjct: 3 DFFGGKLPGKIATIFALLVLSRVGTYIPISGVDRAAFAESLAG--GGGMMAYADTLTGGS 60
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAIL 137
KL F LGI P I +SI+ Q+L + P L +L+KE G G K + Y + +LGFAI+
Sbjct: 61 ISKLGIFSLGIVPYINSSIIFQLLGSVFPELKKLQKEEGEAGRRKFQQYQRYGALGFAIV 120
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+AV Y P+ + + + L GAM + +I + ++E G G+SL+I
Sbjct: 121 QAVGQCLYVRPF---VEDFTPIWLFEQSCALTAGAMILMYIGELLNEIKLGNGTSLLIFA 177
Query: 198 GILTGYTETLYKMLS--QLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
I++ ++ + +S Q G S F G F + T+ V V E RK+ + Y
Sbjct: 178 NIVSALPSSVGQTVSMAQEKGDSSVLAVF----FGAFALTTLGIVYVQEAERKIPMNY-- 231
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 315
+ R ++ Y+PF +N +G+ P++ + LLA P+ L + V
Sbjct: 232 -----STRFNAGGLAKSSYLPFKVNSAGVMPIIFASSLLALPATLTRFTDNGAVLGVARF 286
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEY 375
L+P G P V + FF + + + PK++AD L + GA IP V+PG AT +Y
Sbjct: 287 LSPGGGAGYVP-VNVAMICFFNYFYTFLQLE--PKDVADQLKRQGASIPGVRPGAATRDY 343
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQ 434
+T++ G + L LA + ++ + GF+ TS+LI+VG + R +
Sbjct: 344 ITRVLERLSVLGSVFLGALALTPGAVEQITGLQTFRGFA--GTSLLILVGVATDSARKVR 401
Query: 435 AYNVMPSLSKALRRY 449
+ VM S L +
Sbjct: 402 SELVMESYDTKLDEF 416
>gi|297618364|ref|YP_003703523.1| preprotein translocase subunit SecY [Syntrophothermus lipocalidus
DSM 12680]
gi|297146201|gb|ADI02958.1| preprotein translocase, SecY subunit [Syntrophothermus lipocalidus
DSM 12680]
Length = 421
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 211/423 (49%), Gaps = 26/423 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 85
++R +L T ++++ R+G IP+PG + + + + + G D + GA + S F
Sbjct: 12 GDLRNKLLFTLGMLLVFRLGAHIPVPGINADVFAKLLTNQLFGFYDIISG-GAFKRFSIF 70
Query: 86 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACY 145
+ I+P I ASI+MQ+L ++P L QL+KEG +G +KI Y+ + ++ ++A+ +A
Sbjct: 71 AMSITPYINASIIMQLLTVVIPKLEQLQKEGEEGRKKITQYVRYGTVILGFIQAIGMAIA 130
Query: 146 SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 205
Y + ++ A L G + WI + I+E G G G SLII GI+
Sbjct: 131 MGRYPGVLHKPGIGAYLIIAISLTAGTALLMWIGEMITEKGIGNGISLIIFAGIVARIPS 190
Query: 206 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 265
L M+ L ++ ++ +L + + ++ V V EG R++ +QY A
Sbjct: 191 GLNTMVELLKAGTIGFFN-ILSFVVIALVIISALVAVNEGQRRIPIQY-----AKRVVGR 244
Query: 266 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW---QHVKEILNPETSV 322
++P +N G+ P++ ++ FP+ +AS W V +N
Sbjct: 245 RVYGGQSTFLPLRVNMGGVIPIIFGMSIMMFPATIAS------WFPKSGVSTFINTYFHF 298
Query: 323 GARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQ 380
G +Y +YA +F F F +A + P ++AD + K G IP ++PG+ T +Y+ ++
Sbjct: 299 GT--VLYNILYALLIFFFTYFYVAIIFNPADVADNIKKYGGFIPGIRPGRPTADYIDRVL 356
Query: 381 ASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQAYNV 438
+ F GG+ L+ +A IL +++ ++ S+ G T++LI+VG ++ + +A+ +
Sbjct: 357 SRLTFAGGIFLAFIA----ILPNFVIKVTGITSLYFGGTALLIVVGVALDTMKQLEAHLL 412
Query: 439 MPS 441
+ S
Sbjct: 413 LRS 415
>gi|11467734|ref|NP_050786.1| preprotein translocase subunit SecY [Guillardia theta]
gi|1351058|sp|P28527.2|SECY_GUITH RecName: Full=Protein translocase subunit SecY
gi|81182|pir||S20577 preprotein translocase secY - Cryptomonas sp. chloroplast
gi|3603059|gb|AAC35720.1| SecY-type transporter protein (chloroplast) [Guillardia theta]
Length = 420
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 218/430 (50%), Gaps = 30/430 (6%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 75
+N + +S K +++ R+ T LIV+SR+G F+P+PG D Q +S + V+ L
Sbjct: 1 MNTSIKSIKKQDLKDRIVFTLFLIVMSRLGTFLPIPGVDHDAFYQSIIS--NPLVNFLNV 58
Query: 76 F--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISL 132
F G + F LGI P I ASI++Q+ + +PSL +L+KE G G +KI +++L
Sbjct: 59 FSGGGFASIGVFALGIVPYINASIIVQLATNSIPSLEKLQKEEGELGRQKIVQLTRYVAL 118
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
+A+++++ V+ + PY + + V + L G+M + W + I+E G G G S
Sbjct: 119 VWALIQSIGVSFWVRPY---VFNWDLNFVFAMSLTLTIGSMLIMWFSEQITEKGIGNGPS 175
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV------TEGC 246
L+I + I++G L +LL S ++ + L +F +V +++V++ EG
Sbjct: 176 LLIFINIISG--------LPKLLQSQIQSTRLNIQALDIFVLVFIFSVMIIGIIFIQEGI 227
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
+++ + +++ + Y+P +N SG+ P++ + +L P+ LA ++ +
Sbjct: 228 KRIPI------ISARQLGKGQMDNKTSYLPLKLNQSGVMPIIFASAVLVLPAYLAQLVSN 281
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNV 366
+ V + + ++ ++Y F F I N P +++ L KM + I V
Sbjct: 282 EQLRTVLHLFDGTSNNKLLYLLFYFTLILFFSYFYTSLILN-PNDVSKNLKKMESSIYGV 340
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PGKAT EYL K F G L L+ +A I++ L ++ +G TS+LIIVG
Sbjct: 341 RPGKATTEYLQKTLNRLTFLGALFLAFIAIVPNIIET-LTNLSVFKGLGGTSLLIIVGVQ 399
Query: 427 IELRRSYQAY 436
++ + Q Y
Sbjct: 400 VDTSKQIQTY 409
>gi|257431678|ref|ZP_05608041.1| translocase subunit secY [Staphylococcus aureus subsp. aureus
E1410]
gi|257282557|gb|EEV12689.1| translocase subunit secY [Staphylococcus aureus subsp. aureus
E1410]
Length = 430
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRSKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>gi|288818036|ref|YP_003432383.1| preprotein translocase SecY subunit [Hydrogenobacter thermophilus
TK-6]
gi|384128800|ref|YP_005511413.1| preprotein translocase subunit SecY [Hydrogenobacter thermophilus
TK-6]
gi|288787435|dbj|BAI69182.1| preprotein translocase SecY subunit [Hydrogenobacter thermophilus
TK-6]
gi|308751637|gb|ADO45120.1| preprotein translocase, SecY subunit [Hydrogenobacter thermophilus
TK-6]
Length = 432
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 204/437 (46%), Gaps = 33/437 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL-KL 82
+ R+R T ++ I R+G IPLPG D + +D+ G++ L D G L ++
Sbjct: 12 EDFRKRFLYTLLMFAIYRLGSHIPLPGIDTTAL-EDFFKSFQGTIFYLYDIFSGGNLGRM 70
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEAVI 141
+ F LG+ P I ASI+MQ+L VP L +L KE D G KI Y ++++ A ++++
Sbjct: 71 TLFALGVMPYISASIMMQLLTVAVPELQRLAKEEGDYGRYKINQYTRYLTVFVAFVQSLG 130
Query: 142 VACY--------SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
V+ + P + + T LV M + W+ D I+E G G G SL
Sbjct: 131 VSLWLQNQVSPRGFPI---VPDSGIVFTLTTVIALVSSTMFLVWVGDRITEKGIGNGMSL 187
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
+I GI+ + ++L L + + F+ ++ V ++ + V + E R++ +QY
Sbjct: 188 LIFAGIVANFPNASIRVLEMLKNGDLSPFAFVGAIIFVIAVI-VGIVFMQEAERRIPVQY 246
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
R++ + Y+P INP+G+ P++ LL PS + + P + +
Sbjct: 247 ---PRRQIGRQE--VAGGSTYLPIKINPAGVIPIIFAQSLLIIPSTVIGFINHPIARLLH 301
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
+ NP T Y +Y + F F A L P ++AD L K GA +P V+PG+
Sbjct: 302 DAFNPTT------LFYNFLYVLLIVFFTYFYTAVLINPVDVADNLKKGGAFVPGVRPGQD 355
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T + L I F G + LS++A + +L+ F G T+ LI+VG ++
Sbjct: 356 TQKLLETIVNRLAFIGSIFLSVVAIIPIFISLWLK---VPFYFGGTTALIVVGVALDTLN 412
Query: 432 SYQAYNVMPSLSKALRR 448
+A + + +RR
Sbjct: 413 KLEAQMIQKKYAGYMRR 429
>gi|375110351|ref|ZP_09756576.1| preprotein translocase subunit SecY [Alishewanella jeotgali KCTC
22429]
gi|397171443|ref|ZP_10494847.1| preprotein translocase subunit SecY [Alishewanella aestuarii B11]
gi|374569593|gb|EHR40751.1| preprotein translocase subunit SecY [Alishewanella jeotgali KCTC
22429]
gi|396086906|gb|EJI84512.1| preprotein translocase subunit SecY [Alishewanella aestuarii B11]
Length = 442
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 216/446 (48%), Gaps = 33/446 (7%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
+ AA+ F SE++ RL + I++ R+G F+P+PG D ++ Q + G++ E+ +
Sbjct: 8 SRAAKGGF-SELKSRLLFVLLAIIVFRLGSFVPIPGIDATVLAQLFEQ-QRGTIVEMFNM 65
Query: 77 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
GA + S F LGI P I ASI++Q+L + P++ +L+KEG G KI Y + +L
Sbjct: 66 FSGGALERASVFALGIMPYISASIIVQLLTVMHPAMAELKKEGEAGKRKINQYTRYGTLA 125
Query: 134 FAILEAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
AIL+++ +A LP + + LV G M + W+ + I+E G G G
Sbjct: 126 LAILQSIGIAT-GLPNMMPGLVINPGFAFYFTAVISLVTGTMFLMWLGEQITERGIGNGI 184
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVK 250
SL+I GI+ G+ + + + Q + + +L +GV I W VV E G R++
Sbjct: 185 SLLIFTGIVAGFPSAIGQTIEQARQGDLHF--LLLVAIGVIVIAITWFVVFFERGQRRIV 242
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---- 306
+ Y A + ++P +N +G+ P + + ++ FP +AS GS
Sbjct: 243 VNY-----AKRQQGRQVFAAQSSHLPLKVNMAGVIPPIFASSIILFPGTIASWFGSGEGM 297
Query: 307 --PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGAR 362
F Q + L+P +P +Y +Y+ + F F A + P++ AD L K GA
Sbjct: 298 VANFLQELALTLSP-----GQP-LYMMLYSAAIIFFCFFYTALVFNPRDTADNLKKSGAF 351
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++PG+ T +Y+ K+ G L ++ + + + + N F G TS+LII
Sbjct: 352 IPGIRPGEQTSKYIDKVMTRLTLAGALYITFIC---LVPEFMMVAWNVQFYFGGTSLLII 408
Query: 423 VGSIIELRRSYQAYNVMPSLSKALRR 448
V I++ Q + + L++
Sbjct: 409 VVVIMDFMAQVQTHLMSHQYDSVLKK 434
>gi|393763747|ref|ZP_10352362.1| preprotein translocase subunit SecY [Alishewanella agri BL06]
gi|392605363|gb|EIW88259.1| preprotein translocase subunit SecY [Alishewanella agri BL06]
Length = 442
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 216/446 (48%), Gaps = 33/446 (7%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
+ AA+ F SE++ RL + I++ R+G F+P+PG D ++ Q + G++ E+ +
Sbjct: 8 SRAAKGGF-SELKSRLLFVLLAIIVFRLGSFVPIPGIDATVLAQLFEQ-QRGTIVEMFNM 65
Query: 77 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
GA + S F LGI P I ASI++Q+L + P++ +L+KEG G KI Y + +L
Sbjct: 66 FSGGALERASVFALGIMPYISASIIVQLLTVMHPAMAELKKEGEAGKRKINQYTRYGTLA 125
Query: 134 FAILEAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
AIL+++ +A LP + + LV G M + W+ + I+E G G G
Sbjct: 126 LAILQSIGIAT-GLPNMMPGLVINPGFAFYFTAVISLVTGTMFLMWLGEQITERGIGNGI 184
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVK 250
SL+I GI+ G+ + + + Q + + +L +GV I W VV E G R++
Sbjct: 185 SLLIFTGIVAGFPSAIGQTIEQARQGDLHF--LLLVAIGVIVIAITWFVVFFERGQRRIV 242
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---- 306
+ Y A + ++P +N +G+ P + + ++ FP +AS GS
Sbjct: 243 VNY-----AKRQQGRQVFAAQSSHLPLKVNMAGVIPPIFASSIILFPGTIASWFGSGEGM 297
Query: 307 --PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGAR 362
F Q + L+P +P +Y +Y+ + F F A + P++ AD L K GA
Sbjct: 298 LANFLQELSLTLSP-----GQP-LYMMLYSAAIIFFCFFYTALVFNPRDTADNLKKSGAF 351
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++PG+ T +Y+ K+ G L ++ + + + + N F G TS+LII
Sbjct: 352 IPGIRPGEQTSKYIDKVMTRLTLAGALYITFIC---LVPEFMMVAWNVQFYFGGTSLLII 408
Query: 423 VGSIIELRRSYQAYNVMPSLSKALRR 448
V I++ Q + + L++
Sbjct: 409 VVVIMDFMAQVQTHLMSHQYDSVLKK 434
>gi|83591256|ref|YP_431265.1| preprotein translocase subunit SecY [Moorella thermoacetica ATCC
39073]
gi|83574170|gb|ABC20722.1| protein translocase subunit secY/sec61 alpha [Moorella
thermoacetica ATCC 39073]
Length = 420
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 214/441 (48%), Gaps = 51/441 (11%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFV 66
+L+ A ++ ++R+++F T ++ V+ R+G +P+PG + ++ + + +
Sbjct: 1 MLDTLASAWKLEDLRKKIFFTLLMFVVFRLGAHVPVPGINNAILKELIGTGTIFGFFDVI 60
Query: 67 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 126
SG GA + + F +GI P I ASI+MQ+L ++P+L +L KE ++G +KI Y
Sbjct: 61 SG--------GAFKRFTIFAMGIMPYINASIIMQLLTVVIPALERLAKEDIEGRKKIVQY 112
Query: 127 IWWISLGFAILEAVIVACYSLPYSIYAASHS-----VKHVMVTAFLLVCGAMTMSWICDT 181
+ ++ +IL+A+ + Y A SH+ + + +V +L G + W+ +
Sbjct: 113 TRYGTVILSILQALGMGLY------LARSHAFLRPGLYNYLVVVIMLTAGTTFLMWMGEQ 166
Query: 182 ISESGFGQGSSLIICVGI---LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMW 238
I+E G G G SLII GI L +LY+ ++ + + F + V ++
Sbjct: 167 ITEKGIGNGISLIIFAGIVSRLPAGAASLYQYVTSGTVNIISLLVFAI----VAVLIIAA 222
Query: 239 AVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 298
V V EG R++ +QY A +IP +N +G+ PV+ +L FPS
Sbjct: 223 VVAVQEGERRIAVQY-----AKRVVGRRVYGGQSTHIPLKVNQAGVIPVIFAMSILLFPS 277
Query: 299 ILAS-ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADY 355
LAS S Q + +P R Y +YA + F F A P+++AD
Sbjct: 278 TLASWFPQSSLAQTIVRFFDP------RSAFYMILYALLIIFFTYFYTAVTFNPQDVADN 331
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
+ K G IP ++PG+ T EY+ +I A G + L+ +A +L + IN F G
Sbjct: 332 MKKYGGFIPGLRPGRPTAEYIERILARVTLAGAIFLAFIAVLPNLL-MAITGINVYF--G 388
Query: 416 FTSVLIIVGSIIELRRSYQAY 436
TS+LI+VG +E + +++
Sbjct: 389 GTSLLIVVGVALETMKQLESH 409
>gi|336430405|ref|ZP_08610352.1| preprotein translocase, SecY subunit [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336018214|gb|EGN47966.1| preprotein translocase, SecY subunit [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 437
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 215/437 (49%), Gaps = 29/437 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F E+R+++F T ++V+ R+G +P+PG DR + + + + +
Sbjct: 1 MLTTLKNAFKMKELRKKIFYTFAMLVVIRLGSQLPVPGVDRTYFSRWFAAQTGDAFNFFD 60
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
F G+ L +S F L I+P I +SI++Q+L +P L +++K+G DG +K+ + ++++
Sbjct: 61 AFTGGSFLNMSLFALNITPYITSSIIIQLLTIAIPKLEEMQKDGEDGRKKLTAITRYVTV 120
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
G A++E+ +A S S + +V+ L G+ + WI + I+E+G G G S
Sbjct: 121 GLALIESTAMAI-GFGRSGLLESFNALNVITVVAALTAGSAFLMWIGERITENGVGNGIS 179
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM--WAVVVTEGCRKVK 250
+++ + I++ + L + +Q + + L+ + IV M +++ + RK+
Sbjct: 180 IVLTINIVSRMPQDLAGLYNQFVKGKPVATAVLAALIILAVIVAMVILVIILNDATRKIP 239
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL---GSP 307
+QY A + + IP +N +G+ PV+ + ++ FP I+ ++ G+
Sbjct: 240 VQY-----AKKVQGRKMVGGQSSNIPLKVNTAGVIPVIFASSIMQFPVIICQLIGYKGTG 294
Query: 308 FWQHVKEILN---------PETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNK 358
W H+ + L+ P S+G VY + FF + + I P EIA+ + K
Sbjct: 295 VWSHILKGLSSNSWCKPSEPIYSIGL--VVYIALVIFFAYFYT--SITFNPLEIANNMKK 350
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
G IP ++PGK T +YL +I F G L+I+ + + S G TS
Sbjct: 351 QGGFIPGIRPGKPTSDYLNRILNYIIFIGACGLTIVCVLPFVFNGIF---GANVSFGGTS 407
Query: 419 VLIIVGSIIELRRSYQA 435
++I+V ++E + ++
Sbjct: 408 LIIVVSVVLETLKQIES 424
>gi|319893180|ref|YP_004150055.1| preprotein translocase subunit SecY [Staphylococcus
pseudintermedius HKU10-03]
gi|386318601|ref|YP_006014764.1| preprotein translocase subunit SecY [Staphylococcus
pseudintermedius ED99]
gi|317162876|gb|ADV06419.1| Preprotein translocase secY subunit [Staphylococcus
pseudintermedius HKU10-03]
gi|323463772|gb|ADX75925.1| preprotein translocase, SecY subunit [Staphylococcus
pseudintermedius ED99]
Length = 430
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 212/432 (49%), Gaps = 39/432 (9%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FFK+ E+R ++ T ++VI +IG +IP PG FD R Q G D L
Sbjct: 7 NFFKTKEVRNKILFTLAMLVIFKIGTYIPAPGVNPAAFDNRQGSQ-------GVTDLLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A S F +GI P I ASI+MQ+L IVP + K+G G +K+ ++ + ++
Sbjct: 60 FGGGALKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGETGRKKLNNFTRYFTI 119
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC-----GAMTMSWICDTISESGF 187
A ++++ S ++ Y +K V ++LL+ G + W+ + I++ G
Sbjct: 120 VLAFIQSI---GMSFQFNNYLDGALIKEQNVWSYLLIAIVLTSGTAFLMWLGEQITQYGV 176
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQ-LLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G S+II GIL+ L + Q +G W + GL+ ++T+ AV V +
Sbjct: 177 GNGISIIIFAGILSTLPSGLMQFYQQEFIGQDDVTFAWLKVAGLVVGMILLTVGAVYVLQ 236
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
RK+ +QY K S R S T Y+P +N +G+ PV+ + P L+
Sbjct: 237 AIRKIPIQYA--KKQSHMRLGSQAT----YLPLKVNSAGVIPVIFSMAFFLLPRTLSLFF 290
Query: 305 GSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 363
W Q + +P ++G VY + F + + + P+++A+ L K G+ +
Sbjct: 291 PDADWAQKLGNYADPSHNMGMV--VYVVLIIAFTYFYAFVQVN--PEKMAENLKKQGSYV 346
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PG+ T +Y+TK+ F G + L+++A I ++ + + +G TS+LI++
Sbjct: 347 PGIRPGEQTKKYITKVLYRLTFVGSIFLAVIAILPIIATKFM-NLPQAIQLGGTSLLIVI 405
Query: 424 GSIIELRRSYQA 435
G IE +S +A
Sbjct: 406 GVAIETMKSLEA 417
>gi|86610046|ref|YP_478808.1| preprotein translocase subunit SecY [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558588|gb|ABD03545.1| preprotein translocase, SecY subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 432
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 211/429 (49%), Gaps = 28/429 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDR-RLIPQDYLSFVSGSVDE 72
+A E+F + S +R RLF+T L+++ R+G +IP+P DR R + S V G +D
Sbjct: 10 SAQETFMQMAMASGLRSRLFLTLGLLLLVRLGIYIPIPSIDRARFAAEAANSPVFGLLDV 69
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 131
G L F LGI P I ASI+MQ+L +P+L L+K EG G +I Y +++
Sbjct: 70 FSGGGIS-ALGIFALGILPFINASIIMQLLVSAIPALENLQKNEGEQGRRQISQYTRYVT 128
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
L +AI++ + ++ + ++ + ++ + + T L G++ + W+ + I+E G G G
Sbjct: 129 LVWAIIQGIGISFWVREFA--STTNELAFMASTTLALAAGSLFVMWLGEMITEKGVGSGP 186
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SL+I V I+ L + +S S +L LL +F + + V V EG RK+ +
Sbjct: 187 SLLIFVNIVATLPRALGQTISLARADSSTIGGILL-LLAIFLVTIVGIVFVQEGSRKIPI 245
Query: 252 QYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 309
Y A R+ + E + Y+P +N G+ P++ +++ P LA +
Sbjct: 246 VY-------AKRQVGNKLFREQKSYLPLRLNQGGVMPIIFAYSVMSLPLALAQYTQNLTL 298
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVK 367
V L+P + W Y Y + F+ F + L P ++A L KMGA IP V+
Sbjct: 299 VQVANFLSPTS------WFYIPFYFVLILFFSYFYASLLINPVDLAQNLKKMGASIPGVR 352
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PGKAT EY+ I G L L +A T ++ I +G TS+LI+VG I
Sbjct: 353 PGKATAEYVEGILNRLTLLGALFLCAVAIIPTTVERA-TGITTFQGLGATSLLILVGVAI 411
Query: 428 ELRRSYQAY 436
E + Q Y
Sbjct: 412 ETSKQIQTY 420
>gi|255282625|ref|ZP_05347180.1| preprotein translocase, SecY subunit [Bryantella formatexigens DSM
14469]
gi|255266918|gb|EET60123.1| preprotein translocase, SecY subunit [Marvinbryantia formatexigens
DSM 14469]
Length = 437
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 213/432 (49%), Gaps = 27/432 (6%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL 80
F +IR+RL T ++V+ R+G +P+PG +R I Q + G+ + F G+
Sbjct: 9 FRVKDIRKRLLYTFGMLVVIRLGSQLPVPGVNREYISQFFAQQTDGAFNFFSAFTGGSFE 68
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
++S F L I+P I +SI+MQ+L +P L ++ K+G +G +KI + ++++ A++EA
Sbjct: 69 RMSIFALNITPYITSSIIMQLLTIAIPQLEEMHKDGEEGRKKITAITRYVTVALALIEAT 128
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ + + +K + V A G+ + W+ + I+E G G G S+++ + IL
Sbjct: 129 AMTVAFGRNGMIPDMNILKGITVVA-AWTAGSAFLMWVGERITEKGVGNGISIVLVINIL 187
Query: 201 TGYTE---TLYKMLSQLLGSSV-RWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
+ TLY+ Q G S+ R + +L V I ++ +++++ R++ +QY
Sbjct: 188 SRIPSDIGTLYETFIQ--GKSLARGALAAVIILAVIAITIVFVIILSDAVRRIPVQY--- 242
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
A + + YIP +N +G+ PV+ L + PS++AS+LG +I+
Sbjct: 243 --AKKMQGRKMMGGQSTYIPLKVNTAGVIPVIFAQSLFSMPSMIASVLGVSTDGVGGQII 300
Query: 317 ---------NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVK 367
NP+ V + + Y I F + I P E+AD + K G IP ++
Sbjct: 301 AALNQNNWFNPDQPVYSLGLILY-IALIIAFAYFYTSITFNPIEVADNMKKQGGFIPGIR 359
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PGK T +YL KI F G + L+I+ + + S G TS++IIVG I+
Sbjct: 360 PGKPTSDYLNKILNYIVFIGAVGLTIVVLIPIFFNGVFKAY---VSFGGTSIIIIVGVIL 416
Query: 428 ELRRSYQAYNVM 439
E + ++ V+
Sbjct: 417 ETIKQIESQMVV 428
>gi|384251786|gb|EIE25263.1| pre protein translocase secY subunit [Coccomyxa subellipsoidea
C-169]
Length = 537
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 205/423 (48%), Gaps = 29/423 (6%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF-VSGSVDELGDFGAEL 80
F K ++ +L + LIV SR+G ++ LPG D + S + G +D L G+
Sbjct: 126 DFLKGDLPGKLGIILALIVFSRVGVYMRLPGVDADRFAETVQSGGILGYIDALSG-GSIS 184
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEA 139
++ F LGI P I ASI++Q+L PSL +L R+EG G + + Y ++L A+++A
Sbjct: 185 RVGIFSLGIVPYINASIILQLLATTFPSLKKLQREEGPQGRARFQLYQKLLALAAAVIQA 244
Query: 140 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
V Y P+ ++V + LV GAM + + D I+E G G+S++I I
Sbjct: 245 VGQLTYIRPF---VPEWDATWLVVNSLTLVAGAMVLVHVADMITELKLGNGTSILITANI 301
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 259
+ ++ + Q P + GL F + T+ V V E RK+ + Y
Sbjct: 302 ASALPASVGAAVQQAADKDSSSLP-IYGL--AFFLTTLGIVYVQEAERKIPMNY------ 352
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 319
A+R + + Y+PF +N +G+ PV+ ++ L++ P+ LA +P+ + V L P
Sbjct: 353 -ASRYRNSALSQQSYLPFKVNATGVMPVIFSSTLMSLPTGLARY--APWLEPVAAALGPT 409
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
+Y I + LFN + + PK+++D L + GA IP V+PG+AT +Y+T
Sbjct: 410 G------LLYLPINVLLIVLFNYYYTFLQLDPKDMSDQLKRAGASIPAVRPGRATADYIT 463
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
K G L LA + +++ + GF+ TS+LI+VG + R +A
Sbjct: 464 KTLNRMSILGSAFLGALAAAPPLVESVTGLQAFRGFA--GTSILILVGVATDTARRVKAE 521
Query: 437 NVM 439
M
Sbjct: 522 QAM 524
>gi|15603260|ref|NP_246334.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. Pm70]
gi|12721770|gb|AAK03479.1| SecY [Pasteurella multocida subsp. multocida str. Pm70]
Length = 441
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 207/429 (48%), Gaps = 27/429 (6%)
Query: 30 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 87
R LFV LIV RIG FIP+PG D ++ Q +D F GA + S F L
Sbjct: 22 RLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRASIFAL 80
Query: 88 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 147
GI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A L+AV ++ L
Sbjct: 81 GIMPYISASIIIQLLTTVHPALAELKKEGEAGRRKISKYTRYSTLVLATLQAVGIST-GL 139
Query: 148 PYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 205
P + +V + LV G M + W+ + I+E G G G SLII GI+ G
Sbjct: 140 PNMLPGLVPNVGFSFYLAAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGLPS 199
Query: 206 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 265
+ + + Q + +L + VF VT + V V G R++K++Y A +
Sbjct: 200 AIGQTIEQTRQGQMHLLVLLLIAVIVFA-VTYFVVFVERGQRRIKVEY-----AKRQQGR 253
Query: 266 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEILNPETS 321
+ ++P +N +G+ P + + ++ FP+ LA LG + + +L+P
Sbjct: 254 QILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLAQWLGEGSSLEWLTDLSMLLHP--- 310
Query: 322 VGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKI 379
+P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T Y+ KI
Sbjct: 311 --GQP-LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKI 367
Query: 380 QASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
GGL ++ + ++ N F G TS+LI+V I++ Q++ +
Sbjct: 368 MTRLTLIGGLYITFVCLVPYVMTSAW---NVQFYFGGTSLLIVVVVIMDFIAQVQSHLMS 424
Query: 440 PSLSKALRR 448
AL++
Sbjct: 425 TKYESALKK 433
>gi|52426083|ref|YP_089220.1| preprotein translocase subunit SecY [Mannheimia succiniciproducens
MBEL55E]
gi|52308135|gb|AAU38635.1| SecY protein [Mannheimia succiniciproducens MBEL55E]
Length = 441
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 208/434 (47%), Gaps = 28/434 (6%)
Query: 26 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
SE++ RL FV LIV R+G FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RVGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + +LG A L+A+ +
Sbjct: 76 SIFALGIMPYISASIIIQLLATVYPALNELRKEGESGRRKISKYTRYATLGLATLQAIGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + + Q + +L + VF VT + V G R++K++Y A
Sbjct: 195 AGLPSAIGQTIEQARQGQMHLLVLLLIAVIVFA-VTYFVVFFERGQRRIKVEY-----AK 248
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 316
+ + ++P +N +G+ P + + ++ FP+ L G + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWFGEGSSLEWLTDLSMLL 308
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
+P +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 309 HP-----GQP-LYLIVYAIAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSR 362
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ KI GGL ++ + I+ + N F G TS+LI+V I++ Q
Sbjct: 363 YIDKIMTRLTLIGGLYITFVCLVPYIM---MSAWNVQFYFGGTSLLIVVVVIMDFIVQIQ 419
Query: 435 AYNVMPSLSKALRR 448
++ + AL++
Sbjct: 420 SHLMSTKYESALKK 433
>gi|386866609|ref|YP_006279603.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. animalis ATCC 25527]
gi|385700692|gb|AFI62640.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. animalis ATCC 25527]
Length = 449
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 208/431 (48%), Gaps = 28/431 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++F E+R ++ +I+I RIG FIP PG D +++ + + + + +G
Sbjct: 6 QAFRTKELRNKILFVLGIIIIYRIGSFIPTPGVDYKVVNDCVANTTNNAENFIGLVNLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGAMLQLSIFALGVMPYITASIVVQLLRAVIPRFEALHKEGQSGEAKLTQYTRYLTIGLA 125
Query: 136 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+L++ + A ++ S S+ +++V ++ G + W+ + I+E G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCSNVIPDASIWNMVVMIMVMTGGTGLIMWMAELITEKGIG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
QG S++I + I +G+ L+++ G+ W F + + V ++ ++ V R+
Sbjct: 186 QGMSILIFLSICSGFLPQLWQIGWGTNGADGNWTKFAI-VTVVLLVIMIFVNYVELSQRR 244
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-- 306
+ +QY + S Y+P IN SG+ P + + +LA P++ A S
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLFAQFGNSQQ 299
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
+ Q V + L TSV W Y +YA + F F +I P E AD + + G IP
Sbjct: 300 SWVQWVNKYLANTTSV----W-YICLYALMIVFFTFFYTEITFNPDETADNMKQFGGFIP 354
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++ G AT YL + G + L +A T+L L ++N G T++LII G
Sbjct: 355 GIRAGSATSRYLKYVINRLNTVGAIYLLFVALLPTVLIMAL-KLNTQLPFGGTTLLIIAG 413
Query: 425 SIIELRRSYQA 435
++ R +A
Sbjct: 414 VGLDTLRQAKA 424
>gi|262048497|ref|ZP_06021381.1| preprotein translocase SecY [Staphylococcus aureus D30]
gi|259163355|gb|EEW47913.1| preprotein translocase SecY [Staphylococcus aureus D30]
Length = 430
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 219/430 (50%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPIFATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>gi|425064108|ref|ZP_18467233.1| Preprotein translocase secY subunit [Pasteurella multocida subsp.
gallicida X73]
gi|404381701|gb|EJZ78169.1| Preprotein translocase secY subunit [Pasteurella multocida subsp.
gallicida X73]
Length = 441
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 207/429 (48%), Gaps = 27/429 (6%)
Query: 30 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 87
R LFV LIV RIG FIP+PG D ++ Q +D F GA + S F L
Sbjct: 22 RLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRASIFAL 80
Query: 88 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 147
GI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A L+AV ++ L
Sbjct: 81 GIMPYISASIIIQLLTTVHPALAELKKEGEAGRRKISKYTRYSTLVLATLQAVGIST-GL 139
Query: 148 PYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 205
P + +V + LV G M + W+ + I+E G G G SLII GI+ G
Sbjct: 140 PNMLPGLVPNVGFSFYLAAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGLPS 199
Query: 206 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 265
+ + + Q + +L + VF VT + V V G R++K++Y A +
Sbjct: 200 AIGQTIEQTRQGQMHLLVLLLIAIIVFA-VTYFVVFVERGQRRIKVEY-----AKRQQGR 253
Query: 266 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEILNPETS 321
+ ++P +N +G+ P + + ++ FP+ LA LG + + +L+P
Sbjct: 254 QILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLAQWLGEGSSLEWLTDLSMLLHP--- 310
Query: 322 VGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKI 379
+P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T Y+ KI
Sbjct: 311 --GQP-LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKI 367
Query: 380 QASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
GGL ++ + ++ N F G TS+LI+V I++ Q++ +
Sbjct: 368 MTRLTLIGGLYITFVCLVPYVMTSAW---NVQFYFGGTSLLIVVVVIMDFIAQVQSHLMS 424
Query: 440 PSLSKALRR 448
AL++
Sbjct: 425 TKYESALKK 433
>gi|378775245|ref|YP_005177488.1| Preprotein translocase subunit SecY [Pasteurella multocida 36950]
gi|383311241|ref|YP_005364051.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. HN06]
gi|386835261|ref|YP_006240578.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. 3480]
gi|417851419|ref|ZP_12497164.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|417854184|ref|ZP_12499506.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|421264144|ref|ZP_15715149.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|425066277|ref|ZP_18469397.1| Preprotein translocase secY subunit [Pasteurella multocida subsp.
gallicida P1059]
gi|338218368|gb|EGP04141.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|338219491|gb|EGP05140.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|356597793|gb|AET16519.1| Preprotein translocase subunit SecY [Pasteurella multocida 36950]
gi|380872513|gb|AFF24880.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. HN06]
gi|385201964|gb|AFI46819.1| preprotein translocase, SecY subunit [Pasteurella multocida subsp.
multocida str. 3480]
gi|401688609|gb|EJS84172.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|404381862|gb|EJZ78327.1| Preprotein translocase secY subunit [Pasteurella multocida subsp.
gallicida P1059]
Length = 441
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 207/429 (48%), Gaps = 27/429 (6%)
Query: 30 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 87
R LFV LIV RIG FIP+PG D ++ Q +D F GA + S F L
Sbjct: 22 RLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRASIFAL 80
Query: 88 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 147
GI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A L+AV ++ L
Sbjct: 81 GIMPYISASIIIQLLTTVHPALAELKKEGEAGRRKISKYTRYSTLVLATLQAVGIST-GL 139
Query: 148 PYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 205
P + +V + LV G M + W+ + I+E G G G SLII GI+ G
Sbjct: 140 PNMLPGLVPNVGFSFYLAAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGLPS 199
Query: 206 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 265
+ + + Q + +L + VF VT + V V G R++K++Y A +
Sbjct: 200 AIGQTIEQTRQGQMHLLVLLLIAVIVFA-VTYFVVFVERGQRRIKVEY-----AKRQQGR 253
Query: 266 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEILNPETS 321
+ ++P +N +G+ P + + ++ FP+ LA LG + + +L+P
Sbjct: 254 QILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLAQWLGEGSSLEWLTDLSMLLHP--- 310
Query: 322 VGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKI 379
+P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T Y+ KI
Sbjct: 311 --GQP-LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKI 367
Query: 380 QASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
GGL ++ + ++ N F G TS+LI+V I++ Q++ +
Sbjct: 368 MTRLTLIGGLYITFVCLVPYVMTSAW---NVQFYFGGTSLLIVVVVIMDFIAQVQSHLMS 424
Query: 440 PSLSKALRR 448
AL++
Sbjct: 425 TKYESALKK 433
>gi|255038109|ref|YP_003088730.1| preprotein translocase subunit SecY [Dyadobacter fermentans DSM
18053]
gi|254950865|gb|ACT95565.1| preprotein translocase, SecY subunit [Dyadobacter fermentans DSM
18053]
Length = 437
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 218/439 (49%), Gaps = 43/439 (9%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL 80
F E+R R+ T + I I R+G ++ LPG + P +G + L F GA
Sbjct: 12 FAIEELRTRILNTLLFITIFRLGSYVALPGVE----PDQMNVSSAGLLGLLDTFLGGAFS 67
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
K S F LGI P I ASI +Q+L +P +++KEG G +K+ +++ +++
Sbjct: 68 KASIFALGIMPYISASIAIQLLTMALPYFQKMQKEGESGRKKLNQITRVLTIVVTLVQGT 127
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
++P S S+ + + F+L G M W+ + I++ G G G S++I +GI+
Sbjct: 128 AYLNTTVPDEALLVSRSM-FTISSVFVLTAGTMFCMWLGERITDKGIGNGISMLIMIGIV 186
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGF 256
+ + +YK S + F+L ++ ++ ++ M AV++T+ R++ +QY G
Sbjct: 187 SRFPGAIYKEFVSR--GSGQILLFVLEIVALYFVI-MGAVMLTQAVRRIPIQYAKQVVGN 243
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--SPFWQHVKE 314
++ R+ Y+P +N +G+ P++ L+ PS+ AS S F +V
Sbjct: 244 RVMGGQRQ---------YLPLKLNAAGVMPIIFAQALMFIPSLGASYFAEKSDFASNVAT 294
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKAT 372
I T+ W Y ++A + +F F I+ P++IAD + + G IP VKPG+ T
Sbjct: 295 IFANYTT-----WQYNLLFAVLIIVFTFFYTAISVNPQQIADDMKRGGGFIPGVKPGQQT 349
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--IGFTSVLIIVGSIIELR 430
EY++ + F G L+L+++AT L I+ F+ G TS+LI+VG +++
Sbjct: 350 SEYISSVLDRITFPGALMLAVVATLPAFAS--LLGISTDFAHFFGGTSLLIMVGVVLDTL 407
Query: 431 RSYQAYNVMPSLSKALRRY 449
+ ++Y +M RRY
Sbjct: 408 QQVESYLLM-------RRY 419
>gi|261378061|ref|ZP_05982634.1| preprotein translocase, SecY subunit [Neisseria cinerea ATCC 14685]
gi|269145511|gb|EEZ71929.1| preprotein translocase, SecY subunit [Neisseria cinerea ATCC 14685]
Length = 436
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 219/447 (48%), Gaps = 27/447 (6%)
Query: 11 RLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV 70
+LSS L+N F +R LF+ LIV RIG IP+PG D + + Y S +G +
Sbjct: 5 QLSSALSN-----FGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGIL 58
Query: 71 DELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
L F G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y
Sbjct: 59 GMLNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKLITKYTR 118
Query: 129 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+ ++ AIL+++ VA + + S HV T LV G M + W+ + I+E G G
Sbjct: 119 YGTVLLAILQSLGVASFVFQQGVVVTSSFEFHVS-TIVSLVTGTMFLMWLGEQITERGIG 177
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-R 247
G SLII GI +G + ++++ L + M + ++ ++ VV E R
Sbjct: 178 NGISLIITAGIASGIPSGITRIIT--LTNQGAMSMLMALFIAFGALLLIYLVVYFESAQR 235
Query: 248 KVKLQYYGFKLASAARE-DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
K+ + Y A R+ +S + ++PF +N +G+ P + + ++ FPS L LGS
Sbjct: 236 KIPIHY-------AKRQFNSGLGGQNTHMPFKLNMAGVIPPIFASSIILFPSTLLGWLGS 288
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
++ + G +Y ++A V F F A + PKE+A+ L K GA +P
Sbjct: 289 ADSNNILHTIAGLLQHGQ--ILYIVLFAVTVIFFCYFYTALVFSPKEMAENLKKSGAFVP 346
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG+ T YL K+ +G L ++I+ +L +L N F +G TS+LI+V
Sbjct: 347 GIRPGEQTSRYLEKVVLHLTLFGALYITIICLIPELLTTFL---NVPFYLGGTSLLILVV 403
Query: 425 SIIELRRSYQAYNVMPSLSKALRRYGV 451
++ +Y + K + R V
Sbjct: 404 VTMDFSTQINSYRLTQQYDKLMSRSDV 430
>gi|434383102|ref|YP_006704885.1| preprotein translocase SecY [Brachyspira pilosicoli WesB]
gi|404431751|emb|CCG57797.1| preprotein translocase SecY [Brachyspira pilosicoli WesB]
Length = 446
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 213/447 (47%), Gaps = 43/447 (9%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG--------SVDELGDFGA 78
E+R R+ T + I++ RIG IP PG D P L F+S ++ +L GA
Sbjct: 13 ELRSRILFTVLAILVYRIGSHIPTPGID----PTALLGFLSSAQGGGGLLTIMDLFSGGA 68
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
+ S LGI P I ASI+MQ+L ++P+L +++KEG G +KI Y+ +++LG +++
Sbjct: 69 LFRFSILALGIMPYISASIIMQLLGVVIPALERMQKEGESGRKKINQYVRYLTLGLCVVQ 128
Query: 139 AVIVACYSLPYSIYA---ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+ +A + + A + +++ G M + W+ D I+E G G G S+II
Sbjct: 129 SAAMASWIQSINEGAMIFMRPGLGFILLVVITATTGTMFLMWLGDQITERGLGNGISVII 188
Query: 196 CVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVK 250
GI+ G+ + + K + L S V + L + + ++ VV E G R++
Sbjct: 189 FAGIVARIPAGFYDVIQKKDTDYLNSLV------IVLFFIIFAIVIFCVVYEESGQRRIP 242
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
+QY A +IPF INPSG+ P++ + L+A P+ +AS+ W+
Sbjct: 243 VQY-----AKRVVGRKVFGAQSTHIPFKINPSGVIPIIFASALMAIPAQIASLTRGVQWR 297
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKP 368
+ +L S G+ W Y +Y V +F + P +IA+ L K G IP +P
Sbjct: 298 WLDALLR-FFSYGS--WAYIILYCLLVIMFAYVYTSVQFNPDDIAENLKKQGGFIPGYRP 354
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHY-----LRRINEG--FSIGFTSVLI 421
G T EYL + + G L L+ +A ++ + N + +G TSV+I
Sbjct: 355 GTQTAEYLKTVLSRITIGGSLFLAAIAVFPDLMSKIPVFAPFKGTNNSLVYLMGGTSVMI 414
Query: 422 IVGSIIELRRSYQAYNVMPSLSKALRR 448
V +EL + ++Y M + L++
Sbjct: 415 SVSVAVELLKQIESYLQMHNYDGILKK 441
>gi|300870627|ref|YP_003785498.1| preprotein translocase SecY [Brachyspira pilosicoli 95/1000]
gi|404475025|ref|YP_006706456.1| preprotein translocase SecY [Brachyspira pilosicoli B2904]
gi|431808545|ref|YP_007235443.1| preprotein translocase SecY [Brachyspira pilosicoli P43/6/78]
gi|300688326|gb|ADK30997.1| preprotein translocase, SecY [Brachyspira pilosicoli 95/1000]
gi|404436514|gb|AFR69708.1| preprotein translocase SecY [Brachyspira pilosicoli B2904]
gi|430781904|gb|AGA67188.1| preprotein translocase SecY [Brachyspira pilosicoli P43/6/78]
Length = 446
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 213/447 (47%), Gaps = 43/447 (9%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG--------SVDELGDFGA 78
E+R R+ T + I++ RIG IP PG D P L F+S ++ +L GA
Sbjct: 13 ELRSRILFTVLAILVYRIGSHIPTPGID----PTALLGFLSSAQGGGGLLTIMDLFSGGA 68
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
+ S LGI P I ASI+MQ+L ++P+L +++KEG G +KI Y+ +++LG +++
Sbjct: 69 LFRFSILALGIMPYISASIIMQLLGVVIPALERMQKEGESGRKKINQYVRYLTLGLCVVQ 128
Query: 139 AVIVACYSLPYSIYA---ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+ +A + + A + +++ G M + W+ D I+E G G G S+II
Sbjct: 129 SAAMASWIQSINEGAMIFMRPGLGFILLVVITATTGTMFLMWLGDQITERGLGNGISVII 188
Query: 196 CVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVK 250
GI+ G+ + + K + L S V + L + + ++ VV E G R++
Sbjct: 189 FAGIVARIPAGFYDVIQKKDTDYLNSLV------IVLFFIIFAIVIFCVVYEESGQRRIP 242
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
+QY A +IPF INPSG+ P++ + L+A P+ +AS+ W+
Sbjct: 243 VQY-----AKRVVGRKVFGAQSTHIPFKINPSGVIPIIFASALMAIPAQIASLTRGVQWR 297
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKP 368
+ +L S G+ W Y +Y V +F + P +IA+ L K G IP +P
Sbjct: 298 WLDALLR-FFSYGS--WAYIILYCLLVIMFAYVYTSVQFNPDDIAENLKKQGGFIPGYRP 354
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHY-----LRRINEG--FSIGFTSVLI 421
G T EYL + + G L L+ +A ++ + N + +G TSV+I
Sbjct: 355 GTQTAEYLKTVLSRITIGGSLFLAAIAVFPDLMSKIPVFAPFKGTNNSLVYLMGGTSVMI 414
Query: 422 IVGSIIELRRSYQAYNVMPSLSKALRR 448
V +EL + ++Y M + L++
Sbjct: 415 SVSVAVELLKQIESYLQMHNYDGILKK 441
>gi|256821682|ref|YP_003145645.1| preprotein translocase subunit SecY [Kangiella koreensis DSM 16069]
gi|256795221|gb|ACV25877.1| preprotein translocase, SecY subunit [Kangiella koreensis DSM
16069]
Length = 446
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 133/448 (29%), Positives = 221/448 (49%), Gaps = 37/448 (8%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
+A+S E+++RL + I++ RIG FIP+PG D ++ Q +L G++ + +
Sbjct: 6 QQSAKSGGLGELKQRLLFVLMAIIVFRIGSFIPVPGVDGSVL-QAFLENQGGTIFTMFNV 64
Query: 77 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
GA + S F LGI P I ASI+MQ+L + P L +++KEG G KI Y ++++
Sbjct: 65 FSGGALERASVFALGIMPYISASIIMQILSFVDPRLKEIKKEGESGRRKINQYTRYLTVA 124
Query: 134 FAILEAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
A ++AV ++ LP I A+ + LV G M + W+ + I+E G G G
Sbjct: 125 LATIQAVGMST-QLPGLIPGLVANPDFSFYFIAVVTLVTGTMFLMWLGEQITERGIGNGI 183
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTE-GCRK 248
S+II VGI+ G+ + + ++ S +LG+L GVF + ++ +V E R+
Sbjct: 184 SIIILVGIVAGFPQAIAQIFSDAYDGDRN----ILGVLVFGVFALAVVYFIVWFERAQRR 239
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-- 306
+ + Y A + + ++P +N +G+ P + + ++ FP L S GS
Sbjct: 240 ITINY-----AKRQQGNKVFAAQSSFLPMKLNMAGVIPAIFASSIVLFPGTLLSWFGSGS 294
Query: 307 ---PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA--NLPKEIADYLNKMGA 361
+ + + L P +P VY +YA + F F A P++ AD L K GA
Sbjct: 295 GEVSWLTTMAQNLQP-----GKP-VYIMLYAVGIIFFAFFYTALTQNPRDTADNLKKSGA 348
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVL 420
IP ++PG+ T +YL K+ FWG L + T+ ++ +L I N F G TS+L
Sbjct: 349 FIPGIRPGQQTAQYLDKVTTRLTFWGALYM----TAVCLMPEFLILIFNYPFYFGGTSLL 404
Query: 421 IIVGSIIELRRSYQAYNVMPSLSKALRR 448
IIV I+ QA+ + L++
Sbjct: 405 IIVVVAIDFMAQVQAHLMSQQYDSVLKK 432
>gi|148238752|ref|YP_001224139.1| preprotein translocase subunit SecY [Synechococcus sp. WH 7803]
gi|147847291|emb|CAK22842.1| Preprotein translocase SecY subunit [Synechococcus sp. WH 7803]
Length = 439
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 202/426 (47%), Gaps = 37/426 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS----------FVSGSVDELGDF 76
E+R R+ T L+++ R+G +IP+PG DR Q F G + LG
Sbjct: 23 ELRNRVLTTLGLLMLVRLGIYIPMPGIDRVAFQQFIQQGGQLIGFLDIFTGGGISTLG-- 80
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 135
F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+
Sbjct: 81 -------IFALGILPFINASIILQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWG 133
Query: 136 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
++++VI A PY++ S +V + TA LV G+M + WI + I+E G GQG+SL+I
Sbjct: 134 LIQSVIFAVILRPYALEGLSDAV-FITQTALALVTGSMIVMWISEVITERGIGQGASLVI 192
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
+ I+ + L + + ++ L+ VF + + + V EG R+
Sbjct: 193 FLNIVATLPQALGSTIEKAQTGDRNDVFGIIVLVLVFLVTIVGIIFVQEGARR------- 245
Query: 256 FKLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
+ SA R+ + + + Y+P +N G+ P++ + L+ P +A+ +P
Sbjct: 246 LPIVSAKRQVGGSALLPNRQSYLPLKLNAGGVMPIIFASALIFLPITIANFSQNPLLITA 305
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGK 370
LNP S PW Y ++ + F+ F + P E+A L + G IP V+PG
Sbjct: 306 ASALNPSAS---NPWPYALLFFSLILGFSYFYASLTFNPTEVATNLKRGGVAIPGVRPGS 362
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
AT YL ++ GGL L +A + ++ + +G TS+LI+VG I+
Sbjct: 363 ATATYLEGVKNRLTLLGGLFLGAVAIIPSAVERA-TSVTTFQGLGATSLLILVGVAIDTA 421
Query: 431 RSYQAY 436
+ Q Y
Sbjct: 422 KQVQTY 427
>gi|440533469|emb|CCP58979.1| preprotein translocase subunit SecY [Chlamydia trachomatis
Ia/SotonIa1]
gi|440534363|emb|CCP59873.1| preprotein translocase subunit SecY [Chlamydia trachomatis
Ia/SotonIa3]
Length = 457
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 227/457 (49%), Gaps = 41/457 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 76
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ + +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRFFTLVL 125
Query: 135 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A ++L P + A S+K + T +++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMITGTLLLMWVGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF----MLGLLGVFTIVTM 237
IS+ G G G SLII +GIL + L + ++L S F +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGILASFPSVLGSIFNKLNLGSQDPSEFGIVSLLILCAVFVFVLM 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
V++ EG RK+ +Q+ + RE + Y+P +N +G+ PV+ + LL FP
Sbjct: 246 ATVLIIEGMRKIPVQHA--RRIIGRRE---VVGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 298 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTI-YAFFVFLFNIFDIANL--PKEI 352
+ + L S + + + +L+P + V Y+I Y + F F A P++I
Sbjct: 301 ATIGQFLSSESSWLKRIATMLSPGS-------VAYSIFYVLLIIFFTYFWTATQFRPEQI 353
Query: 353 ADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEG 411
A + K GA IP ++ GK T YL G + L+++A +IL LR N
Sbjct: 354 ASEMKKNGAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVVAILPSILGRILRVDANVS 413
Query: 412 FSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+ +G T++LI+VG I++ + A+ ++ L++
Sbjct: 414 YFLGGTAMLIVVGVILDTMKQIDAFLLVRRYDGVLKK 450
>gi|282857343|ref|ZP_06266580.1| preprotein translocase, SecY subunit [Pyramidobacter piscolens
W5455]
gi|282584843|gb|EFB90174.1| preprotein translocase, SecY subunit [Pyramidobacter piscolens
W5455]
Length = 428
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 207/425 (48%), Gaps = 22/425 (5%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL-SFVSGSVDELGDFGAELKLSFF 85
+++RR+ T ++ + R+G IP PG + + Q + S V G +D GA + S F
Sbjct: 13 DLKRRILFTLGMLFVFRLGAHIPTPGINSAAMSQLFEGSGVLGFLDLFAG-GALRRFSLF 71
Query: 86 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACY 145
LG++P I ASI++Q+ I P+L +L+KEG G +K+ Y + ++ FA ++A+ +A +
Sbjct: 72 SLGVAPYINASIVLQLAAVIFPALERLQKEGPQGQKKMTQYTRYGAIFFAFVQAIGMAMW 131
Query: 146 SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 205
+ AAS V V G++ + W+ + +++ G G G SL+I GI+ E
Sbjct: 132 LRRAGVLAASG--LDFFVAVITAVTGSVAVMWLGEEMTDHGIGNGISLLIFAGIVARLPE 189
Query: 206 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 265
+ + S + + +L L V V AV++ +G R++ +QY A +
Sbjct: 190 AVIQTFSMISSGEMNVVTLILA-LAVMVAVLAGAVLLEQGQRRLPVQY-----AKRVVGN 243
Query: 266 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGAR 325
+IP +N G+ P++ + LL FPS + + H E L + G+
Sbjct: 244 RVYGGQSSFIPLRVNMGGVMPIIFASSLLIFPSTVLRLF------HGTERLANYFAPGS- 296
Query: 326 PWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQAST 383
W+Y +Y + F F A + P +IAD + K G I ++PGK T +Y+ KI +
Sbjct: 297 -WLYTVLYVVLIVFFGFFYTAMVFNPSDIADNMKKNGGFILGIRPGKPTSDYIEKIASRI 355
Query: 384 RFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLS 443
G + L ++A +L + + F G TSVLIIVG +E+ + +M +
Sbjct: 356 TLVGSVFLVVVALVPDLLTNVFGITS--FYFGGTSVLIIVGVALEIVEQVNSQLLMRNYE 413
Query: 444 KALRR 448
L+R
Sbjct: 414 GVLKR 418
>gi|383455050|ref|YP_005369039.1| preprotein translocase subunit SecY [Corallococcus coralloides DSM
2259]
gi|380734321|gb|AFE10323.1| preprotein translocase subunit SecY [Corallococcus coralloides DSM
2259]
Length = 448
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 207/442 (46%), Gaps = 42/442 (9%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDEL 73
LN A F +E+R RL T VL+ + RIG FI PG DR + D G V
Sbjct: 3 LNAFANVFRIAELRSRLAYTLVLLSVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVSLF 62
Query: 74 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
F GA ++S F LGI P + ASI++Q+L +VPSL +L+KEG G +KI Y + +
Sbjct: 63 NLFSGGALEQMSIFGLGIMPYVSASIIIQLLAVVVPSLERLQKEGAAGRQKINQYTRYGT 122
Query: 132 LGFAILEAVIVACY--SLPYSIYAASHSVKHVMV----------TAFLLVCGAMTMSWIC 179
+ +I++ V ++ + SL S A V+V T L G + W+
Sbjct: 123 IALSIVQGVGISRWLASLGRS-DAGQGGFNQVVVPNDNLWFTFMTVVSLTAGTAFIMWLG 181
Query: 180 DTISESGFGQGSSLIICVGILTGY---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVT 236
+ I+E G G G SLII GI+ +TL + +Q + + +LGLL ++
Sbjct: 182 ERITERGIGNGISLIIFAGIVARVLPGAKTLLDLTTQEIVNVAA----VLGLLFFMLLII 237
Query: 237 MWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAF 296
V V G R+V +QY A Y P +N SG+ P + +L+F
Sbjct: 238 GVVVYVERGMRRVPIQY-----AKRMAGRRMFAGQATYFPMKVNASGVIPPIFAGAVLSF 292
Query: 297 PSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIAD 354
P+ L + PF Q + S+ WVY ++ V F+ F A P ++AD
Sbjct: 293 PATLGAWF--PFLQGFQR------SIEGNLWVYNGLFVLLVVFFSYFYTALTFRPDDVAD 344
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 414
+ K G IP ++PG+ T E++ + F G + L+I+ +++ L F+
Sbjct: 345 NIKKQGGYIPGIRPGRQTAEFIERTLNRLTFGGAIYLAIICVIPSVISSVL---GVQFTF 401
Query: 415 GFTSVLIIVGSIIELRRSYQAY 436
G T++LI+VG ++ + + +
Sbjct: 402 GGTALLIVVGVALDTVQQIEGH 423
>gi|88807903|ref|ZP_01123414.1| preprotein translocase SecY [Synechococcus sp. WH 7805]
gi|88787942|gb|EAR19098.1| preprotein translocase SecY [Synechococcus sp. WH 7805]
Length = 439
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 206/434 (47%), Gaps = 53/434 (12%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS----------FVSGSVDELGDF 76
E+R R+ T L+++ R+G +IP+PG DR Q F G + LG
Sbjct: 23 ELRNRVLTTLGLLMLVRLGIYIPMPGIDRVAFQQFIQQGGQLIGFLDIFTGGGISTLG-- 80
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 135
F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+
Sbjct: 81 -------IFALGILPFINASIILQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWG 133
Query: 136 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
++++VI A PY++ S V + TA LV G+M + WI + I+E G GQG+SL+I
Sbjct: 134 LIQSVIFAVILRPYALEGLSDGV-FITQTALALVTGSMIVMWISEVITERGIGQGASLVI 192
Query: 196 CVGILTGYTETLYKMLSQLLGSSV-------RWWPF-MLGLLGVFTIVTMWAVVVTEGCR 247
+ I+ L Q LGS++ R F ++ L+ VF + + + V EG R
Sbjct: 193 FLNIVA--------TLPQALGSTIEKAQTGDRSDVFGIIVLVLVFLVTIVGIIFVQEGAR 244
Query: 248 KVKLQYYGFKLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
+ + SA R+ + + + Y+P +N G+ P++ + L+ P +A+
Sbjct: 245 R-------LPIVSAKRQVGGSALLPNRQSYLPLKLNAGGVMPIIFASALIFLPITIANFS 297
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGAR 362
+P LNP S PW Y ++ + F+ F + P E+A L + G
Sbjct: 298 QNPLLITAASALNPSAS---NPWPYALLFFSLILGFSYFYASLTFNPTEVATNLKRGGVA 354
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP V+PG AT YL ++ GGL L +A + ++ + +G TS+LI+
Sbjct: 355 IPGVRPGSATANYLEGVKNRLTLLGGLFLGAVAIIPSAVERA-TSVTTFQGLGATSLLIL 413
Query: 423 VGSIIELRRSYQAY 436
VG I+ + Q Y
Sbjct: 414 VGVAIDTAKQVQTY 427
>gi|159904201|ref|YP_001551545.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9211]
gi|159889377|gb|ABX09591.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9211]
Length = 439
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 204/424 (48%), Gaps = 27/424 (6%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGA 78
E+R R+ +T ++++ R+G +IP+PG DR + + F+ +G G
Sbjct: 20 LNKELRGRVLITLGMLLLVRLGIYIPVPGIDR----EAFKEFIQQGGQLIGFLDIFTGGG 75
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAIL 137
L F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+ ++
Sbjct: 76 ISTLGIFALGILPFINASIIIQLLTAALPQLEDLQKNEGEAGRRKIAQITRYLALGWGLM 135
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
++++ A YSI + S V V TA LV G+M + W+ + I+E G GQG+SL+I +
Sbjct: 136 QSLVFALILRQYSIESLSE-VSFVFQTAIALVTGSMIVMWLSEIITERGIGQGASLVIFL 194
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
I+ + L + + ++ LL VF I + + V EG R+
Sbjct: 195 NIVATLPKALSSTIEKAQTGDRNDVVGIIVLLVVFLITIVGIIFVQEGARR-------LP 247
Query: 258 LASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 314
+ SA R+ + + + Y+P +N G+ P++ + L+ P +A+ +PF
Sbjct: 248 IVSAKRQIGGTALLPNRQSYLPLKLNAGGVMPIIFASALIFLPITIANFTKNPFLIRAAG 307
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKAT 372
LNP S PW Y + + F F + P +IA L + G IP V+PG AT
Sbjct: 308 ALNPSAS---NPWPYALTFFALILGFAYFYASLTINPIDIAANLKRGGVAIPGVRPGSAT 364
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+YL+ +Q GGL L +A ++ + +G TS+LI+VG I+ +
Sbjct: 365 SKYLSSVQNRLTLLGGLFLGSVAIVPAAVERA-TNVQTFQGLGATSLLILVGVAIDTAKQ 423
Query: 433 YQAY 436
Q Y
Sbjct: 424 VQTY 427
>gi|251793847|ref|YP_003008579.1| preprotein translocase subunit SecY [Aggregatibacter aphrophilus
NJ8700]
gi|422337195|ref|ZP_16418167.1| preprotein translocase subunit secY [Aggregatibacter aphrophilus
F0387]
gi|247535246|gb|ACS98492.1| preprotein translocase, SecY subunit [Aggregatibacter aphrophilus
NJ8700]
gi|353345747|gb|EHB90038.1| preprotein translocase subunit secY [Aggregatibacter aphrophilus
F0387]
Length = 441
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 208/434 (47%), Gaps = 28/434 (6%)
Query: 26 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
SE++RRL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKRRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLATVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + + Q + +L + VF VT + V V G R++K++Y A
Sbjct: 195 AGLPAAIGQTIEQARLGQMHVLVLLLIAVTVFA-VTYFVVFVERGQRRIKVEY-----AK 248
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 316
+ + ++P +N +G+ P + + ++ FP+ L G + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWGGQGSSLEWLTDLSMLL 308
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
+P +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 309 HP-----GQP-LYLVVYAAAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSR 362
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ KI GGL ++ + ++ N F G TS+LI+V I++ Q
Sbjct: 363 YIDKIMTRLTLIGGLYVTFVCLVPYVMTSAW---NVQFYFGGTSLLIVVVVIMDFIVQIQ 419
Query: 435 AYNVMPSLSKALRR 448
++ + AL++
Sbjct: 420 SHLMSTKYESALKK 433
>gi|373494212|ref|ZP_09584817.1| preprotein translocase, SecY subunit [Eubacterium infirmum F0142]
gi|371968709|gb|EHO86163.1| preprotein translocase, SecY subunit [Eubacterium infirmum F0142]
Length = 427
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 212/446 (47%), Gaps = 32/446 (7%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
+L ++ E+R ++ T +++VI IG IP+PG DR + + + G + +L
Sbjct: 2 DMLKTVKQAIKVPEMRAKILFTVMMLVIFCIGSHIPVPGIDRTQLANMFKN--QGGLFDL 59
Query: 74 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
D G+ + F L I+P + ASI++Q+L P +L KEG +G +K+ + ++
Sbjct: 60 FDLFSGGSFSNFTIFALSITPYVTASIIVQLLTVAFPYFERLAKEGNEGRKKMAAITRYM 119
Query: 131 SLGFAILEAVIVACYSLPYSIY---AASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
++G A+++A + L ++ + + +V +L G + W+ + I+E+G
Sbjct: 120 TVGLALIQA-----FGLTIGLFRRAVVNQTWFSFVVITLVLTAGTAFLMWLGEQINENGI 174
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G G S++I GI+ + + Q ++ +L + +V + + + +G R
Sbjct: 175 GNGISILIFAGIVARIPSDVRSIALQYKEGAINIITLIL-FIAFALLVVVGVIFIQQGTR 233
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--G 305
++ +QY A +IP +N +G+ PV+ LL FP + L
Sbjct: 234 RIPVQY-----AKRVVGRKMYGGQSTHIPLKVNQAGVIPVIFAVSLLQFPLTITYFLKSN 288
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARI 363
S F V + L+P + G WVY + FN F I+ P E+A + G I
Sbjct: 289 SGFTAFVTKWLSPSGNPGV--WVYAIFNIILIIAFNYFYTTISFNPIEVAQNMKSNGGFI 346
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF--TSVLI 421
P ++PGKATIEYL K+ G L L+++AT T++ Y G +I F TS+LI
Sbjct: 347 PGIRPGKATIEYLAKVMGRISIVGALFLAVIATLPTLISQY-----TGLNIRFGGTSLLI 401
Query: 422 IVGSIIELRRSYQAYNVMPSLSKALR 447
+VG I++ R + VM + L+
Sbjct: 402 VVGVAIDVMRQLENQMVMRNYKGFLK 427
>gi|261854970|ref|YP_003262253.1| preprotein translocase subunit SecY [Halothiobacillus neapolitanus
c2]
gi|261835439|gb|ACX95206.1| preprotein translocase, SecY subunit [Halothiobacillus neapolitanus
c2]
Length = 444
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 213/440 (48%), Gaps = 37/440 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+E+R+R+F +++V+ RIG FIPLPG D ++ + G + + F GA ++S
Sbjct: 18 TELRQRIFFVIMVLVVYRIGTFIPLPGIDVDVMRTLFTQHSGGILGMMNMFSGGALSRMS 77
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LG+ P I ASI++Q+L ++PSL +++KEG G KI Y + +LG +++A+ V+
Sbjct: 78 LFALGVMPYISASIIVQLLSSVLPSLERIKKEGEAGRRKITQYTRYGTLGLGLVQALGVS 137
Query: 144 CYSLPYSIYAAS----HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
S+ S + V L+ G M + W+ + I+E G G G SLII GI
Sbjct: 138 IALQGQSVGGQSLVYTPGFGFLFVATMTLLTGTMLLVWLGEQITERGVGNGISLIIFAGI 197
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT---------EGCRKVK 250
+ G L +G + G LGV T++ + ++V G R++
Sbjct: 198 VAG--------LPTAIGGTAEL--VRTGELGVITLLILAVLIVAVTAFVVFVERGQRRIT 247
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
+ Y A + + ++P +N +G+ P + + ++ FP+ L + LG +
Sbjct: 248 VNY-----ARRQQGRGMAGQQSSHLPLKLNMAGVIPPIFASSIILFPATLGNWLGQQ--E 300
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKP 368
++ + + T++ +Y +YA + F F A + +E AD L + GA +P ++P
Sbjct: 301 NMAWLRSVSTALSPGQPLYVGLYATAIIFFCFFYTALVFNSRETADNLKRSGAFVPGIRP 360
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G+ T Y+ K+ FWG L ++ + L Y N F G TS+LIIV +++
Sbjct: 361 GEHTARYIDKVLTRLTFWGALYITAVCLLPEFLILYW---NVPFYFGGTSLLIIVVVLMD 417
Query: 429 LRRSYQAYNVMPSLSKALRR 448
Q++ V +R+
Sbjct: 418 FMAQVQSHLVSHQYDSLVRK 437
>gi|434388551|ref|YP_007099162.1| preprotein translocase, SecY subunit [Chamaesiphon minutus PCC
6605]
gi|428019541|gb|AFY95635.1| preprotein translocase, SecY subunit [Chamaesiphon minutus PCC
6605]
Length = 447
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 209/433 (48%), Gaps = 26/433 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
+A E+F + + +R R+ VT L++++R G F+P+PG DR + + + ++
Sbjct: 10 SAQETFVQMAQAAGLRGRILVTLGLLILARFGTFVPIPGIDRVAFAESIKNSPTIGFLDI 69
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISL 132
GA + F LGI P I ASI++Q+L +P+L +L+KE G G KI ++++
Sbjct: 70 FSGGAFSTVGVFALGIIPYINASIIIQLLTTALPALEKLQKEEGEAGRRKISQITRYVAV 129
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
G+ I ++ +A + Y++ + V+ T L G+M + WI + I+E G G G+S
Sbjct: 130 GWGIAYSIGIALWLQKYAL-PGHQTTFFVVSTVMALTAGSMFVMWISELITERGIGNGAS 188
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
L+I + I+ ++L + + LL VF ++T+ V V EG R++ +
Sbjct: 189 LLIFLNIVAVLPKSLGDTIDLAQSGDSSILTRTVALLAVFILMTVGIVFVQEGTRRIPI- 247
Query: 253 YYGFKLASAAREDSPITEVE--PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
SA R+ + E Y+P +N G+ P++ + +L PS LAS G
Sbjct: 248 ------ISARRQVGRRIQRERTSYLPLRLNQGGVMPIIFASSVLVLPSALASFAGKNVGA 301
Query: 311 H------VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGAR 362
+ ++N + + Y + F+ F + P ++A L KMGA
Sbjct: 302 DGNLDAISQAVINAANFLAPGTPAHVAFYVVLIVFFSYFYSSLVVNPVDMAQNLKKMGAS 361
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLI 421
IP ++PG AT +Y+ I A G + L I+AT T ++ L GF G TS+LI
Sbjct: 362 IPGIRPGVATSKYIEGILARLTLLGAIFLGIVATVPTAIESALGVSTFRGF--GATSLLI 419
Query: 422 IVGSIIELRRSYQ 434
+V I+ + Q
Sbjct: 420 LVSVAIDTAKQVQ 432
>gi|149279644|ref|ZP_01885773.1| protein translocase subunit SecY [Pedobacter sp. BAL39]
gi|149229680|gb|EDM35070.1| protein translocase subunit SecY [Pedobacter sp. BAL39]
Length = 444
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 209/417 (50%), Gaps = 18/417 (4%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 85
E++ R+ T +++++ R + LPG D L+ ++ S + G +D G+ ++S
Sbjct: 15 QELKERIVFTLMILLVYRFVSHVVLPGVDATLLGENEKSGLLGLLDMFAG-GSFSRVSIL 73
Query: 86 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACY 145
LG+ P I ASI++Q+L VPS +++KEG G +K+ ++++ ++AV
Sbjct: 74 ALGVMPYISASIVVQLLGIAVPSFQKMQKEGESGRKKLNQITRYLTVAITAVQAVGYVKT 133
Query: 146 SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 205
+P H++ VM T F+L G + + W+ + I++ G G G SLII VGI+
Sbjct: 134 QVPMEAIVIDHTLFFVMAT-FVLAAGTLFVMWLGEKITDKGIGNGISLIIMVGIIARLPI 192
Query: 206 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 265
LY+ ++ + S +L ++ +F +V M+ +++ +G RKV +QY A +
Sbjct: 193 ALYQEITSRIVSDGGLIALVLEIVALFAVV-MFTIMIVQGVRKVPVQY-----AKRIVGN 246
Query: 266 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI-LNPETSVGA 324
V YIP +N +G+ P++ L+ P+ L P Q+ + + TS+
Sbjct: 247 RQFGGVRQYIPLKVNAAGVMPIIFAQALMFIPATLTQFF--PSLQNTWLVQFSDYTSLA- 303
Query: 325 RPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQAS 382
Y +AF + F F I P +++D + K G IP +KPG AT ++ + +
Sbjct: 304 ----YSLTFAFLIIAFTFFYTAITVNPTQMSDDMKKNGGFIPGIKPGFATSSFIDDVISK 359
Query: 383 TRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
F G + L+I+A ++ + + G TS+LI+VG +++ + ++Y +M
Sbjct: 360 ITFPGAVFLAIIAILPSVAVKFGIKSEFAHFYGGTSLLILVGVVLDTLQQIESYLLM 416
>gi|227501154|ref|ZP_03931203.1| possible preprotein translocase subunit SecY [Anaerococcus
tetradius ATCC 35098]
gi|227216739|gb|EEI82140.1| possible preprotein translocase subunit SecY [Anaerococcus
tetradius ATCC 35098]
Length = 424
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 197/400 (49%), Gaps = 30/400 (7%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
++ AA+ + EIR+R + T +++V+ R+G IP+P D + + Y + VD L
Sbjct: 3 DIIKKAAK---EEEIRKRFYFTLLMLVVYRLGNNIPIPFIDSKALADAYNNIQGTLVDYL 59
Query: 74 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
G LS F LG+ P I ASI+MQ+L ++P L +L +EG G + I+ Y +++
Sbjct: 60 NMLTGGGLSTLSIFALGVQPYITASIVMQLLSVVIPRLEELSREGEQGRKTIQKYTRYVT 119
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+G AI +A+ + ++ +A+ K VM +L+ G M ++W+ +TI+E G G G+
Sbjct: 120 IGLAIFQAIAITNGLYGAALSSATGFQKIVM--NIVLIGGTMFVTWMGETITEKGLGNGT 177
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SLII +GI+ + T+ + L + ++ + + + + V+++EG RKV +
Sbjct: 178 SLIIFMGIIASFPRTIARWKQGLHYDTTSVASIVI-MAVIIVFIVLAVVLISEGERKVPI 236
Query: 252 QY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
QY G K+ +IP +N G+ P++ + +LA PS ++ G
Sbjct: 237 QYAKRVVGRKMYGGQ---------STHIPVKVNMGGVMPIIFASAVLAIPSTVSLFFGGN 287
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPN 365
+ T+VG VY I + +F F I E A L + G +P
Sbjct: 288 GKSSISHFFQG-TTVGF--GVYLLIQTILILVFAYFYNQIQFNTVEYAKQLQQNGGFVPG 344
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSIL----ATSSTIL 401
++PGK T ++L + F G + L++L A SS +L
Sbjct: 345 IRPGKPTSDFLASVSTKITFIGSIALALLTIIPAISSRVL 384
>gi|269837086|ref|YP_003319314.1| preprotein translocase subunit SecY [Sphaerobacter thermophilus DSM
20745]
gi|269786349|gb|ACZ38492.1| preprotein translocase, SecY subunit [Sphaerobacter thermophilus
DSM 20745]
Length = 432
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 219/446 (49%), Gaps = 27/446 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F E+RR++ T ++V+ R IP+PG DR ++ Q + L
Sbjct: 1 MLEAAINAFRIPELRRKILFTVGILVLFRFIATIPVPGVDREVLQQLLEQNQLLGMLNLF 60
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
S +G+ P I ASI+MQ+L I+P L +L +EG G +I Y W+++
Sbjct: 61 SGSTLANFSILAMGVYPYITASIIMQLLTPIIPRLEELSREGQQGRNRINHYTHWLTVPL 120
Query: 135 AIL----EAVIVACYSL--PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
A+L +AV++A + + ++ A +++ + + ++ G + + W+ + I+E+G G
Sbjct: 121 ALLQGYGQAVLMANAGVLSDFGLFNADTALRSISIL-LVMTAGTVFLVWLGELITENGIG 179
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGC 246
G S+II GI+ +++ ++ G++ + +G L+G+ TIV + V++ EG
Sbjct: 180 NGVSIIIFGGIVASLPQSVANLIGG--GTATQNVLGTVGFILIGLITIVGI--VLLNEGV 235
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R++ +Q+ A R YIP +N +GM P++ ++ FP ++A+ L +
Sbjct: 236 RRIPVQH-----AKRIRRGRVYGGGSTYIPLKVNSAGMIPLIFAISIMVFPGMIANFLQT 290
Query: 307 PFWQHVKEILNP-ETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARI 363
V+ + T+ +Y IY V F F L + IA+ L K GA I
Sbjct: 291 SDRDWVRNLAGSVATAFNPNGLLYQVIYFVMVVAFTYFYTMVLFQQQNIAENLQKQGAFI 350
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSVLI 421
P V+PG+ T YLT++ G L L ++A +L + +I +G TS+LI
Sbjct: 351 PGVRPGRNTEAYLTRVLMRITLVGALSLGVVA----VLPYIAAQITGVTTLFLGATSLLI 406
Query: 422 IVGSIIELRRSYQAYNVMPSLSKALR 447
+VG I+ R +A +M + LR
Sbjct: 407 VVGVAIDTMRQLEAQLMMRNYEGFLR 432
>gi|183601964|ref|ZP_02963333.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis HN019]
gi|219682877|ref|YP_002469260.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis AD011]
gi|241190453|ref|YP_002967847.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241195859|ref|YP_002969414.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|384190685|ref|YP_005576433.1| SecY protein [Bifidobacterium animalis subsp. lactis BB-12]
gi|384191827|ref|YP_005577574.1| SecY protein [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|384193453|ref|YP_005579199.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis BLC1]
gi|384195009|ref|YP_005580754.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis V9]
gi|387820320|ref|YP_006300363.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis B420]
gi|387821987|ref|YP_006301936.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis Bi-07]
gi|423678975|ref|ZP_17653851.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis BS 01]
gi|183218849|gb|EDT89491.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis HN019]
gi|219620527|gb|ACL28684.1| preprotein translocase SecY subunit [Bifidobacterium animalis
subsp. lactis AD011]
gi|240248845|gb|ACS45785.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240250413|gb|ACS47352.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|289178177|gb|ADC85423.1| SecY [Bifidobacterium animalis subsp. lactis BB-12]
gi|295793440|gb|ADG32975.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis V9]
gi|340364564|gb|AEK29855.1| SecY [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|345282312|gb|AEN76166.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis BLC1]
gi|366042164|gb|EHN18645.1| preprotein translocase subunit SecY [Bifidobacterium animalis
subsp. lactis BS 01]
gi|386653021|gb|AFJ16151.1| Preprotein translocase secY subunit [Bifidobacterium animalis
subsp. lactis B420]
gi|386654595|gb|AFJ17724.1| Preprotein translocase secY subunit [Bifidobacterium animalis
subsp. lactis Bi-07]
Length = 449
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 208/431 (48%), Gaps = 28/431 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++F E+R ++ +I+I RIG FIP PG D +++ + + + + +G
Sbjct: 6 QAFRTKELRNKILFVLGIIIIYRIGSFIPTPGVDYKVVNDCVANTTNNAENFIGLVNLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGAMLQLSIFALGVMPYITASIVVQLLRAVIPRFEALHKEGQSGEAKLTQYTRYLTIGLA 125
Query: 136 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+L++ + A ++ + S+ +++V ++ G + W+ + I+E G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCNNVIPDASIWNMVVMIMVMTGGTGLIMWMAELITEKGIG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
QG S++I + I +G+ L+++ G+ W F + + V ++ ++ V R+
Sbjct: 186 QGMSILIFLSICSGFLPQLWQIGWGTNGTDGNWTKFAI-VTVVLLVIMIFVNYVELSQRR 244
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-- 306
+ +QY + S Y+P IN SG+ P + + +LA P++ A S
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLFAQFGNSQQ 299
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
+ Q V + L TSV W Y +YA + F F +I P E AD + + G IP
Sbjct: 300 SWVQWVNKYLANTTSV----W-YICLYALMIVFFTFFYTEITFNPDETADNMKQFGGFIP 354
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++ G AT YL + G + L +A T+L L ++N G T++LII G
Sbjct: 355 GIRAGSATSRYLKYVINRLNTVGAIYLLFVALLPTVLIMAL-KLNTQLPFGGTTLLIIAG 413
Query: 425 SIIELRRSYQA 435
++ R +A
Sbjct: 414 VGLDTLRQAKA 424
>gi|225849527|ref|YP_002729692.1| preprotein translocase subunit SecY [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644157|gb|ACN99207.1| preprotein translocase, SecY subunit [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 429
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 217/437 (49%), Gaps = 32/437 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
E+R R+ T +++ + R+G IP+PG + ++ Y + G++ + + GA +
Sbjct: 12 KELRSRIAFTLIILAVYRLGTHIPVPGVNSEML-MHYFNSAGGALFNIYNLFSGGALGRF 70
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEAVI 141
S F LG+ P I ASI+MQ+L ++P+L +L+KE D G KI Y ++++ A +++
Sbjct: 71 SVFALGVMPYISASIIMQLLTAVIPTLERLQKEEGDYGRWKISQYTRYLTIAIASFQSLG 130
Query: 142 VACYSLPYSIYAASHSVK-----HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++ + + + + V++T ++ G + + W+ + I+E G G G S+II
Sbjct: 131 LSIWLTTLKTESGASLISLSPFTFVILTTVIVTTGTVLLMWLGEKITEFGIGNGISMIIL 190
Query: 197 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
GI+ G + + +L+ V + L + V V + E R++ +QY
Sbjct: 191 SGIVAGIVPAILRTY-ELVKVGVISILLLTVALVIIVAVIAGIVYIQEAERRIPIQY--- 246
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--SPFWQHVKE 314
AR + I++ Y+PF +NPSG+ P++ +L FP+ +A S + + +
Sbjct: 247 -----ARRNIMISQSASYLPFKLNPSGVIPIIFAVAILMFPATIAQFFANKSEIARMIVD 301
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKAT 372
L+P++ +VY+ +Y + F F A L P +IAD L + GA IP V+ G T
Sbjct: 302 YLSPQS------YVYFGLYVALIIFFAYFYTAILINPVDIADNLRRSGAFIPGVRSGSQT 355
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+EY+ I F G + L+++A +L +L N F G TS LI+V ++
Sbjct: 356 VEYINYILTRLVFAGSIFLALIAILPMLLIKWL---NVPFYFGGTSALIVVVVALDTIHQ 412
Query: 433 YQAYNVMPSLSKALRRY 449
+AY M LRR+
Sbjct: 413 IEAYLAMKKYEGFLRRF 429
>gi|87124981|ref|ZP_01080828.1| preprotein translocase SecY subunit [Synechococcus sp. RS9917]
gi|86167301|gb|EAQ68561.1| preprotein translocase SecY subunit [Synechococcus sp. RS9917]
Length = 439
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 203/426 (47%), Gaps = 37/426 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS----------FVSGSVDELGDF 76
E+R R+ T L+++ R+G +IP+PG DR Q F G + LG
Sbjct: 23 ELRSRVLTTLGLLMLVRLGIYIPMPGIDRVAFQQFLQQGGQLIGFLDIFTGGGISTLG-- 80
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 135
F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+
Sbjct: 81 -------VFALGILPFINASIILQLLTAALPQLEDLQKNEGEAGRRKIAQITRYVALGWG 133
Query: 136 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
++++++ A Y++ S +V V+ TA LV G+M + W+ + I+E G GQG+SL+I
Sbjct: 134 LIQSIVFAMILRQYAVEGLSDTV-FVVQTALALVTGSMVVMWLSEVITERGIGQGASLVI 192
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
+ I+ + L + + ++ L+ VF + + + V EG R+
Sbjct: 193 FLNIVATLPQALGATIEKAQTGDRNDVVGIIVLVLVFLVTIVGIIFVQEGARR------- 245
Query: 256 FKLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
+ SA R+ + + + Y+P +N G+ P++ + L+ P +A++ +P
Sbjct: 246 LPIVSAKRQVGGTALLPSRQSYLPLKLNAGGVMPIIFASALIFLPLTIANVTKNPLLIRA 305
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGK 370
LNP A PW Y ++ + F F + P +IA L K G IP V+PG
Sbjct: 306 ASALNPSA---ANPWPYALLFFALILGFAYFYASLTVNPTDIASNLKKGGVAIPGVRPGS 362
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
AT YL+ +Q GGL L +A + ++ + +G TS+LI+VG I+
Sbjct: 363 ATAAYLSGVQNRLTLLGGLFLGAVAIIPSAVERA-TGVTTFQGLGATSLLILVGVAIDTA 421
Query: 431 RSYQAY 436
+ Q Y
Sbjct: 422 KQVQTY 427
>gi|392389852|ref|YP_006426455.1| protein translocase subunit secY/sec61 alpha [Ornithobacterium
rhinotracheale DSM 15997]
gi|390520930|gb|AFL96661.1| protein translocase subunit secY/sec61 alpha [Ornithobacterium
rhinotracheale DSM 15997]
Length = 455
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 210/441 (47%), Gaps = 49/441 (11%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--------G 77
E+R +L +T L+++ R G +IPLPG D I D L+ G+ +E G G
Sbjct: 15 EELRNKLIITLSLLLVYRFGSYIPLPGIDLSNINTDVLN-ARGADNENGLLSLLNAFTGG 73
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
+ S LG+ P I ASI++Q++ VP L +L+KEG G +KI W+++ ++
Sbjct: 74 GFSRASILALGVMPYISASIVVQLMGMAVPYLQKLQKEGESGRKKITQITRWLTIAICLV 133
Query: 138 EA----VIVACYSLPYSIYAASHSVKHVMVTAF--------LLVCGAMTMSWICDTISES 185
+A V + LPY A + + V T+F +L+ G + + W+ + I++
Sbjct: 134 QAPAYLTSVTNFFLPYGDPAIAPAYV-VSPTSFWFWLPSIVILITGTIFIMWLGEKITDK 192
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G G SLII VGI+ + LSQ G FML + F VTM+ V++ +G
Sbjct: 193 GIGNGISLIIMVGIMANLPSAFFAELSQQSGI------FMLFTILGFLAVTMYCVLLVKG 246
Query: 246 CRKVKLQYYGFKLASAAREDSPIT---EVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
R+V +QY G A R + T V YIP +N +G+ P++ ++ P +LA
Sbjct: 247 VRQVPVQYVG--RAQGGRSNYMKTFTNTVRQYIPLKVNAAGVMPIIFAQAIMFLPGLLAR 304
Query: 303 ILGSP-----FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA-NLP-KEIADY 355
+ F+Q + + + + Y ++ + LF F A +P ++A+
Sbjct: 305 AVYKEGNMPSFFQSMSDPFS---------FWYCVVFGILIVLFTFFYTAVTIPVNQMAED 355
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
L + IP VKPGK T ++L I + G +LL+I A I+ + G
Sbjct: 356 LRRNEGIIPRVKPGKDTADFLDDILSKITLPGSILLAIAAIFPAIVHQLGVGTAFSYFFG 415
Query: 416 FTSVLIIVGSIIELRRSYQAY 436
TS++I+VG I++ + Y
Sbjct: 416 GTSLIIMVGVILDTAQQINTY 436
>gi|149922192|ref|ZP_01910630.1| SecY protein [Plesiocystis pacifica SIR-1]
gi|149816932|gb|EDM76417.1| SecY protein [Plesiocystis pacifica SIR-1]
Length = 438
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 199/424 (46%), Gaps = 23/424 (5%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
E+RRR+ T ++ + R G F+ +PG DR ++ + G + F GA LS
Sbjct: 12 ELRRRVLFTLAMLAVYRFGIFVAVPGVDRTVMDKLVSQQTGGFLGYFNMFSGGALSNLSV 71
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
F LGI P I ASI+MQ++ ++P L QL+KEG G KI Y + ++G A+++ +A
Sbjct: 72 FALGIMPYISASIIMQLMTVVIPKLEQLQKEGETGRRKINQYSRYGTVGLALVQGYFMAS 131
Query: 145 Y----SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ + P + ++T L G + W+ + I+E G G G SLII GI+
Sbjct: 132 WLEGQNTPGQTLVLETGLPFKLMTMLSLTAGTCFLMWLGEQITERGIGNGISLIIFAGII 191
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLA 259
Y++ + + + P L +L V +V + VV+ E G R++ + Y A
Sbjct: 192 ADMPTASYQLAQKAIDDPENFGPLPLAMLLVVVLVVIAFVVIMERGQRRIPVIY-----A 246
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 319
+ Y+P IN +G+ P + + ++ FP+ +A + G+P+ Q
Sbjct: 247 KRVVGKRMFGGSQNYLPLRINNAGVIPPIFASSIIMFPAQIAGMTGNPYLQRFAAAF--- 303
Query: 320 TSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
S G W+Y T+Y F F I P ++AD L K A IP V+PGK T E++
Sbjct: 304 -SYGN--WLYLTVYVALCIFFCYFYTQIQFNPVDLADNLKKQNASIPGVRPGKRTAEHIE 360
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYN 437
I F G +S + L N F G TS+LI+VG ++ + +++
Sbjct: 361 AILGRLTFAGSWYISAVCVLPVFLQT---EFNVPFYYGGTSLLIVVGVALDTAQQIESHL 417
Query: 438 VMPS 441
V S
Sbjct: 418 VTRS 421
>gi|416893397|ref|ZP_11924585.1| preprotein translocase subunit SecY [Aggregatibacter aphrophilus
ATCC 33389]
gi|347813951|gb|EGY30603.1| preprotein translocase subunit SecY [Aggregatibacter aphrophilus
ATCC 33389]
Length = 441
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 208/434 (47%), Gaps = 28/434 (6%)
Query: 26 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
SE++RRL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKRRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLATVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + + Q + +L + VF VT + V V G R++K++Y A
Sbjct: 195 AGLPAAIGQTIEQARLGQMHVLVLLLIAVIVFA-VTYFVVFVERGQRRIKVEY-----AK 248
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 316
+ + ++P +N +G+ P + + ++ FP+ L G + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWGGQGSSLEWLTDLSMLL 308
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
+P +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 309 HP-----GQP-LYLVVYAAAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSR 362
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ KI GGL ++ + ++ N F G TS+LI+V I++ Q
Sbjct: 363 YIDKIMTRLTLIGGLYVTFVCLVPYVMTSAW---NVQFYFGGTSLLIVVVVIMDFIVQIQ 419
Query: 435 AYNVMPSLSKALRR 448
++ + AL++
Sbjct: 420 SHLMSTKYESALKK 433
>gi|262038241|ref|ZP_06011631.1| preprotein translocase, SecY subunit [Leptotrichia goodfellowii
F0264]
gi|261747708|gb|EEY35157.1| preprotein translocase, SecY subunit [Leptotrichia goodfellowii
F0264]
Length = 432
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 217/430 (50%), Gaps = 23/430 (5%)
Query: 12 LSSVLNNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV 70
L+ + N +S FK E+++R+ T V+ I+RIG I +PG + + ++G +
Sbjct: 3 LTEAIVNRIQSIFKIPELKKRVAFTLVMFAIARIGVHIAVPGINMAAFKNFQNNAIAGFL 62
Query: 71 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ L GA + S F LGI P I +SI+ Q+L I P + +++KEG +KI + ++
Sbjct: 63 N-LFSGGAVQRASIFSLGIIPYINSSIVFQLLGVIFPKIDEMQKEGGKERDKITQWTRYV 121
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
++ AI ++ +A + K ++ T L+ G + WI + IS G G G
Sbjct: 122 TIILAIAQSFGIAITLINQPGLVVEPGPKFIISTMALMTGGTAFLMWISERISIRGIGNG 181
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SS++I +GI+ L +++ Q++ S++ + F L ++ +F ++ V + R++
Sbjct: 182 SSMLIFLGIVV----NLPQVIQQMVSSNINFIFFGLSII-LFVVIIALMVDIQLAERRIP 236
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFW 309
+QY G S + Y+P IN +G+ P++ + L+A P + +L + FW
Sbjct: 237 IQYAGKGSLGFGGGQSAVGR-RTYLPLKINTAGVMPIIFASVLMAAPPFIVQMLKANAFW 295
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGARIPNV 366
Q K+ +T V +Y ++AF + +F+ F IA P+++++ L + G IP V
Sbjct: 296 Q--KQF--SQTGV-----LYLLLFAFLIIVFSFFYTLTIAFDPEKVSEDLKQSGGTIPTV 346
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+ GK T +YL K+ F L L+IL I Y I +G TS+LI+VG
Sbjct: 347 RAGKETADYLEKVVTRVTFGSALFLAILGIFPNIWFGYFLHIP--VLLGGTSLLILVGVA 404
Query: 427 IELRRSYQAY 436
+EL + +Y
Sbjct: 405 VELIQQIDSY 414
>gi|350570674|ref|ZP_08939023.1| preprotein translocase subunit SecY [Neisseria wadsworthii 9715]
gi|349795338|gb|EGZ49139.1| preprotein translocase subunit SecY [Neisseria wadsworthii 9715]
Length = 430
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 220/442 (49%), Gaps = 49/442 (11%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
++++ RL ++I RIG IP+PG D ++ + Y + +G + L F G+ + S
Sbjct: 14 NDLKNRLLFLLGALIIYRIGTHIPVPGVDAAILAKAYQNQSAGILGMLNMFSGGSLERFS 73
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F +GI P I ASI+MQ+ I+PSL L+KEG G I Y ++ A L+++ VA
Sbjct: 74 IFAIGIMPYISASIVMQLASEILPSLKSLKKEGDAGRRVITKYTRIGTVLLATLQSIGVA 133
Query: 144 CYSLPYSIYAASHSVKHVMVTAF--------LLVCGAMTMSWICDTISESGFGQGSSLII 195
SL YS V+V+ F LV G M + W+ + ++E G G G SLII
Sbjct: 134 --SLVYS------QENLVIVSKFEFYISAIVCLVGGTMFLMWLGEQMTERGIGNGISLII 185
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYY 254
GI G + ++L+ L S + LGV +V + VV E RKV + Y
Sbjct: 186 TAGIAAGIPSGIKQLLTLLNNDSTGVLQVIAIGLGVIFLV--YIVVCFESALRKVPIHY- 242
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 314
A R+ I ++PF +N SG+ P + + L+ FP+ + S LG+ Q+
Sbjct: 243 ------AKRQ--VIGGQNTHMPFKLNMSGVIPPIFASSLIMFPATIGSWLGNN--QNETW 292
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKAT 372
+ + +G +Y +++F + F F A + PKE+A+ L K GA IPN++PG+ T
Sbjct: 293 LTQLVSMLGHGQTLYLLLFSFLIIFFCYFYTALVFSPKEMAENLKKSGAFIPNIRPGEQT 352
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIE--- 428
YL K+ F+G L + TS +L L ++N F +G TS+LI+V ++
Sbjct: 353 ANYLEKLVMRLTFFGALYI----TSICLLPELLTLKVNIPFYLGGTSLLILVVVTMDFST 408
Query: 429 ------LRRSYQAYNVMPSLSK 444
+ Y+ +N M SLS+
Sbjct: 409 QIASYKMTERYEHFN-MKSLSR 429
>gi|195952663|ref|YP_002120953.1| preprotein translocase subunit SecY [Hydrogenobaculum sp. Y04AAS1]
gi|195932275|gb|ACG56975.1| preprotein translocase, SecY subunit [Hydrogenobaculum sp. Y04AAS1]
Length = 430
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 212/443 (47%), Gaps = 37/443 (8%)
Query: 16 LNNAAESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+NN + F+ E +R+R+ T ++ I R+G IP+PG D + D++S + GS+ L
Sbjct: 1 MNNFLKEIFELETLRKRVVFTLIVFAIYRLGSHIPIPGVDPVAL-ADFMSNLKGSLFSLY 59
Query: 75 DF--GAEL-KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWI 130
D G L +++ F LG+ P I ASI+MQ+L +P L +L KE D G +KI Y +I
Sbjct: 60 DIFSGGNLSRMTLFALGVMPYISASIVMQLLSSAIPELQKLAKEEGDYGRQKINEYTKYI 119
Query: 131 SLGFAILEAVIVACY----SLPYSIYAASHS-VKHVMVTAFLLVCGAMTMSWICDTISES 185
++ A +++ +A + + P+ H + V+V +V M + W+ D I+E
Sbjct: 120 TVFVAGFQSLGIATWLEHQTSPHGYPVVPHGGILFVVVAVLGMVASTMILVWLGDMITEK 179
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G G S++I GI+ + E + +S L + + F +G + + V V+ E
Sbjct: 180 GIGNGMSMLIFAGIVANFPEATIRFVSMLRHGDISPFAF-VGAILIIIAVIAAIVIFQEA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
R++ +QY R++ Y+P +NP+G+ P++ LL PS + +
Sbjct: 239 ERRIPIQY---PRRQVGRQE--FVGGATYLPIKLNPAGVIPIIFAQSLLIVPSTILGFIK 293
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARI 363
+P Q + + NP + Y Y + F F A L P ++A+ L K I
Sbjct: 294 NPIAQSIHDAFNPLS------LPYNFAYVVLIIFFTYFYTAVLINPYDVAENLKKANGFI 347
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P V+PG+ T+++ + G LSI+A L +L+ F G T+ LI+V
Sbjct: 348 PGVRPGQQTVKFFESVINRLVIIGAAFLSIVAIVPLFLTVWLK---VPFYFGGTTALIVV 404
Query: 424 GSIIE---------LRRSYQAYN 437
G ++ + + Y+AY
Sbjct: 405 GVALDTLNQIDAQIITKKYKAYT 427
>gi|15605239|ref|NP_220025.1| preprotein translocase subunit SecY [Chlamydia trachomatis
D/UW-3/CX]
gi|237802939|ref|YP_002888133.1| preprotein translocase subunit SecY [Chlamydia trachomatis
B/Jali20/OT]
gi|255311328|ref|ZP_05353898.1| preprotein translocase subunit SecY [Chlamydia trachomatis 6276]
gi|255317629|ref|ZP_05358875.1| preprotein translocase subunit SecY [Chlamydia trachomatis 6276s]
gi|376282520|ref|YP_005156346.1| protein translocase subunit [Chlamydia trachomatis A2497]
gi|385240038|ref|YP_005807880.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/9768]
gi|385240963|ref|YP_005808804.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/11222]
gi|385242816|ref|YP_005810655.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/9301]
gi|385243717|ref|YP_005811563.1| Protein translocase subunit [Chlamydia trachomatis D-EC]
gi|385244597|ref|YP_005812441.1| Protein translocase subunit [Chlamydia trachomatis D-LC]
gi|385246425|ref|YP_005815247.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/11074]
gi|385270212|ref|YP_005813372.1| Protein translocase subunit [Chlamydia trachomatis A2497]
gi|7404464|sp|P28539.3|SECY_CHLTR RecName: Full=Protein translocase subunit SecY
gi|3328947|gb|AAC68111.1| Translocase [Chlamydia trachomatis D/UW-3/CX]
gi|231274173|emb|CAX10967.1| protein translocase subunit [Chlamydia trachomatis B/Jali20/OT]
gi|296436043|gb|ADH18217.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/9768]
gi|296436971|gb|ADH19141.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/11222]
gi|296437904|gb|ADH20065.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/11074]
gi|297140404|gb|ADH97162.1| preprotein translocase subunit SecY [Chlamydia trachomatis G/9301]
gi|297748640|gb|ADI51186.1| SecY [Chlamydia trachomatis D-EC]
gi|297749520|gb|ADI52198.1| SecY [Chlamydia trachomatis D-LC]
gi|347975352|gb|AEP35373.1| SecY [Chlamydia trachomatis A2497]
gi|371908550|emb|CAX09180.1| protein translocase subunit [Chlamydia trachomatis A2497]
gi|438690445|emb|CCP49702.1| preprotein translocase subunit SecY [Chlamydia trachomatis A/7249]
gi|438691530|emb|CCP48804.1| preprotein translocase subunit SecY [Chlamydia trachomatis A/5291]
gi|438692903|emb|CCP47905.1| preprotein translocase subunit SecY [Chlamydia trachomatis A/363]
gi|440525434|emb|CCP50685.1| preprotein translocase subunit SecY [Chlamydia trachomatis
K/SotonK1]
gi|440528111|emb|CCP53595.1| preprotein translocase subunit SecY [Chlamydia trachomatis
D/SotonD5]
gi|440529001|emb|CCP54485.1| preprotein translocase subunit SecY [Chlamydia trachomatis
D/SotonD6]
gi|440532575|emb|CCP58085.1| preprotein translocase subunit SecY [Chlamydia trachomatis
G/SotonG1]
Length = 457
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 226/457 (49%), Gaps = 41/457 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 76
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRLFTLVL 125
Query: 135 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A ++L P + A S+K + T +++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMITGTLLLMWVGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF----MLGLLGVFTIVTM 237
IS+ G G G SLII +GIL + L + ++L S F +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGILASFPSVLGSIFNKLNLGSQDPSEFGIVSLLILCAVFVFVLM 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
V++ EG RK+ +Q+ + RE + Y+P +N +G+ PV+ + LL FP
Sbjct: 246 ATVLIIEGMRKIPVQHA--RRIIGRRE---VVGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 298 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTI-YAFFVFLFNIFDIANL--PKEI 352
+ + L S + + + +L+P + V Y+I Y + F F A P++I
Sbjct: 301 ATIGQFLSSESSWLKRIATMLSPGS-------VAYSIFYVLLIIFFTYFWTATQFRPEQI 353
Query: 353 ADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEG 411
A + K GA IP ++ GK T YL G + L+++A +IL LR N
Sbjct: 354 ASEMKKNGAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVVAILPSILGRILRVDANVS 413
Query: 412 FSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+ +G T++LI+VG I++ + A+ ++ L++
Sbjct: 414 YFLGGTAMLIVVGVILDTMKQIDAFLLVRRYDGVLKK 450
>gi|27262236|gb|AAN87399.1| protein translocase subunit SecY [Heliobacillus mobilis]
Length = 422
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 213/447 (47%), Gaps = 49/447 (10%)
Query: 12 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYL 63
+S+++ ++ S++R ++ T V+ +I RIG IP+PG +R I Q +
Sbjct: 1 MSTLVGTLQNAWKISDLRTKIAYTLVMFLIFRIGAHIPVPGINRAAIEQLMNTGSLFGFF 60
Query: 64 SFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKI 123
+SG G+ K S F + I+P I ASI+MQ+L ++P L QL KEG DG KI
Sbjct: 61 DVISG--------GSFRKFSVFAMSITPYINASIIMQLLTVVIPRLEQLAKEGEDGRRKI 112
Query: 124 KSYIWWISLGFAILEAVIVACYSLPYSIYAA--SHSVKHVMVTAFLLVCGAMTMSWICDT 181
Y + ++ A ++A+ L Y + A + S+ ++ A L G + WI +
Sbjct: 113 TEYTRYFTIVLAFIQAI-----GLSYGLTGAVSNPSIWSYLLIALTLTAGTAFLMWIGER 167
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
I+E+G G G SLII GI++ + M+ + + L +L + +
Sbjct: 168 ITENGIGNGISLIIFAGIVSRLPSGIMTMVEYVRVGTTNILNAALFVL-IAAATIAGIIY 226
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
+ EG R++ + Y ++ +IP +N +G+ PV+ + +LAFP+ +A
Sbjct: 227 INEGQRRIPVNYAKRQVGRRVYGGQ-----NTHIPMRVNMAGVIPVIFASSILAFPTTIA 281
Query: 302 SIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNK 358
+ GSP Q + + G+ +++ YA + F F I P E+AD L K
Sbjct: 282 AFFPGSPIGQWFQSYF----AFGS--FLHSVFYAVLILFFAYFYTAITFNPVEVADNLKK 335
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
G IP ++PGK T +Y K+ GGL L++++ T + + N F G T+
Sbjct: 336 YGGFIPGIRPGKPTADYFGKVMGRITLVGGLFLAVISLLPTFIIKFTGISNIYF--GGTA 393
Query: 419 VLIIVGSIIE---------LRRSYQAY 436
+LI+VG ++ L R+YQ +
Sbjct: 394 LLIVVGVALDTMKQMESNMLMRNYQGF 420
>gi|392392101|ref|YP_006428703.1| protein translocase subunit secY/sec61 alpha [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390523179|gb|AFL98909.1| protein translocase subunit secY/sec61 alpha [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 429
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 216/439 (49%), Gaps = 54/439 (12%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 80
EIR ++ T ++ ++ RIG IP+P I D LS + GS L DF G+
Sbjct: 14 EIRTKIGFTLLMFLVFRIGAHIPIP-----FINHDVLSNMLGS-GTLYDFLDTFSGGSFR 67
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY----------IWWI 130
+ S F L I+P I ASI++Q+L ++PSL +L KEG G +KI Y I
Sbjct: 68 RFSVFALSITPYITASIILQLLTIVIPSLERLAKEGEFGRKKITQYTRYGTVILGFIQGF 127
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
+ F + A+I+ + + IY ++ A +L G + W+ + I+E+G G G
Sbjct: 128 GMTFGLRGALIIPKAGMEWLIY---------LLVALILTAGTAFLMWLGERITENGIGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SLII GI+ G + + ++ L + + +LGL+ + + V + EG R+++
Sbjct: 179 ISLIIFAGIVAGVPDAIKRIAGLLNVGEITLFS-VLGLIVIGLGIIAGVVFIQEGQRRIQ 237
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPF 308
+QY A +IP +N +G+ P++ LLAFPS +A+ + S +
Sbjct: 238 VQY-----AKRVVGRRVYGGQSSHIPMKVNQAGVIPIIFAISLLAFPSTIATWMPSTSGY 292
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNV 366
Q V + L S+ + P Y +YA + F F ++ P ++AD L K G IP +
Sbjct: 293 VQFVNKWLVMNGSLTSIP--YLIVYAMLIIFFTYFYTAVSFNPVDVADNLKKYGGFIPGL 350
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PG+AT +YL+KI + GG L+++A +++ N ++G TS+LI+V
Sbjct: 351 RPGRATSDYLSKILSRLTLAGGTFLALIAVLPSLVIGLTGIPN--ITLGGTSLLIVVSVA 408
Query: 427 IE---------LRRSYQAY 436
+E ++R YQ +
Sbjct: 409 LETMKQLESMLMQRHYQGF 427
>gi|407474693|ref|YP_006789093.1| preprotein translocase subunit SecY [Clostridium acidurici 9a]
gi|407051201|gb|AFS79246.1| preprotein translocase subunit SecY [Clostridium acidurici 9a]
Length = 425
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 210/418 (50%), Gaps = 19/418 (4%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDFGAELKLSF 84
E+R+++ T +++ I R+G IP+PG + +I Q + S G +D L GA +
Sbjct: 13 ELRKKMIFTLMMLFIYRVGSSIPVPGINGSVIAQMFDSQAGGLLDFINLMAGGAFKNFTI 72
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
F L I P I ASI++Q+L +PSL +L +EG +G +KI Y ++++ +L A+ A
Sbjct: 73 FALNIYPYITASIILQLLTIAIPSLEELSREGEEGRKKISQYTKYLTI---VLAAIQAAG 129
Query: 145 YSLPYSIYA-ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
S+ + A + V +L G + W+ + I+E G G G SL+I VGI++
Sbjct: 130 ISIGFFRQALIKDDFLSIAVVIIVLTAGTAFLMWLGEQITEKGVGNGISLLIFVGIVSRA 189
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 263
E L KM S + + L+ I+ + +++ EG RK+ +QY A
Sbjct: 190 PEGLIKMFSAVKAGQANIIAVIAFLIIALAII-VGVIMIQEGQRKIPVQY-----AKRVV 243
Query: 264 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVG 323
+IP + +G+ PV+ +T LL FP I+A F V + L+ +VG
Sbjct: 244 GRKVYGGQSTHIPMKVLMAGVIPVIFSTSLLQFPQIIALFFKGGFADFVNKYLSLNGTVG 303
Query: 324 ARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQA 381
W+Y + + F F I P E ++ L + G IP ++PGK T +YL+K+ +
Sbjct: 304 V--WIYSILNVLLIIFFTYFYTAIQFNPIEYSNNLKQNGGFIPGIRPGKPTSDYLSKVVS 361
Query: 382 STRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
G + L+I+AT I++ + ++N F G T +LI+VG +IE + +A +M
Sbjct: 362 RITLAGAIALAIIATLPVIIEAIV-KLNIHF--GGTGILIVVGVVIETVKQLEAQMLM 416
>gi|74316443|ref|YP_314183.1| preprotein translocase subunit SecY [Thiobacillus denitrificans
ATCC 25259]
gi|74055938|gb|AAZ96378.1| SecY protein [Thiobacillus denitrificans ATCC 25259]
Length = 437
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 200/422 (47%), Gaps = 29/422 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+++RRL +++ RIG FIP+PG D ++ Q + S G + F GA + S
Sbjct: 12 GDLKRRLLFLLGALIVYRIGTFIPVPGIDPLVLDQLFKSQQGGILGMFNMFSGGALSRFS 71
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q++ + P L L+KEG G KI Y + +L A+ +A+ +A
Sbjct: 72 VFALGIMPYISASIIVQLMTTVSPQLEALKKEGEAGRRKITQYTRYGTLFLAVFQALGIA 131
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
+ + ++T L G M + W+ + I+E G G G S+II GI G
Sbjct: 132 IALEAQAGLVLDPGMAFRLITVVTLTAGTMFLMWLGEQITERGLGNGISIIIFAGIAAGL 191
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 263
+ L +L + P +L L +VT V V G RK+ + Y A R
Sbjct: 192 PSAIGGTL-ELTRTGAFSIPLVLMLFVGVLLVTALVVFVERGQRKILVNY-------AKR 243
Query: 264 EDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEILN 317
+ + ++P +N +G+ P + + ++ FP+ LA GS + + V L+
Sbjct: 244 QVGKMVVGGQSSHLPLKLNMAGVIPPIFASSIILFPATLAGWFGSGENMGWLKDVGATLS 303
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEY 375
P +P VY +YA + F F A + PKE AD L K GA +P ++PG T Y
Sbjct: 304 P-----GQP-VYVLLYALAIIFFCFFYTALVFNPKETADNLKKSGAFVPGIRPGDQTARY 357
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
+ KI G + ++++ +L +L + N F G TS+LIIV ++ Q
Sbjct: 358 IDKILTRLTLVGAIYITLVC----LLPEFLILKWNVPFYFGGTSLLIIVVVTMDFMAQVQ 413
Query: 435 AY 436
AY
Sbjct: 414 AY 415
>gi|172038946|ref|YP_001805447.1| preprotein translocase subunit SecY [Cyanothece sp. ATCC 51142]
gi|354552765|ref|ZP_08972073.1| preprotein translocase, SecY subunit [Cyanothece sp. ATCC 51472]
gi|171700400|gb|ACB53381.1| preprotein translocase SecY subunit [Cyanothece sp. ATCC 51142]
gi|353556087|gb|EHC25475.1| preprotein translocase, SecY subunit [Cyanothece sp. ATCC 51472]
Length = 438
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 136/437 (31%), Positives = 215/437 (49%), Gaps = 38/437 (8%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDR-RLIPQDYLSFVSGSVDE 72
A E+F + + +R RL +T L+++ R G FIP+PG DR + + + V G +D
Sbjct: 10 TAQETFLQMAQAAGLRGRLLITIGLLILIRFGIFIPIPGIDRAKFVSAISNNQVLGFLDI 69
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 131
G L F LGI P I ASI+MQ+L +PSL L+K EG G KI +++
Sbjct: 70 FTGGGIS-TLGIFALGILPFINASIIMQLLTAAIPSLEDLQKNEGEAGRRKISQITRYVA 128
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
G+A++++ + L YA + ++ V T L G+M + W+ + I+E G G G+
Sbjct: 129 AGWAVIQSTAITVGLLRE--YALTDTIWFVPETVLALTAGSMFVMWVSELITERGIGNGA 186
Query: 192 SLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
SL+I V I+ TL + + +Q G +L L+ + IV + V V EG R++
Sbjct: 187 SLLIFVNIVASLPRTLGQTIDYAQTGGRQAVAQVVILLLVFLVMIVGI--VFVQEGTRRI 244
Query: 250 KLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
+ SA R+ E Y+P +N G+ P++ + +L P LA G
Sbjct: 245 PI-------ISARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLILPQSLAGFFGDE 297
Query: 308 --FWQ---HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIADYLNKM 359
F Q V L P T WVY +Y+ + F+ F I N P++++ L KM
Sbjct: 298 GQFSQILIQVANALRPGT------WVYVGVYSLLILFFSYFYASLIVN-PEDVSKNLKKM 350
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G+ IP ++PG+ T EYL + F G + LS +AT T+++ + +G TS+
Sbjct: 351 GSSIPGIRPGEKTKEYLEGVLNRLTFLGAIFLSFVATVPTLVEGAT-GVTTFRGLGATSL 409
Query: 420 LIIVGSIIELRRSYQAY 436
LI+VG I+ + Q Y
Sbjct: 410 LILVGVAIDTAKQIQTY 426
>gi|33241143|ref|NP_876085.1| preprotein translocase subunit SecY [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238673|gb|AAQ00738.1| Preprotein translocase subunit SecY [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 439
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 203/424 (47%), Gaps = 27/424 (6%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGA 78
E+R R+ +T +++ R+G +IP+PG DR + + F+ +G G
Sbjct: 20 LNKELRGRVLITLGMLLFVRLGIYIPVPGIDR----EAFKEFIQQGGQLIGFLDIFTGGG 75
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAIL 137
L F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+ ++
Sbjct: 76 ISTLGIFALGILPFINASIIIQLLTAALPQLEDLQKNEGEAGRRKISQITRYVALGWGLM 135
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
++++ A Y+I + S + V TA LV G+M + W+ + I+E G GQG+SL+I +
Sbjct: 136 QSLVFALILRQYAIESLSETA-FVFQTAIALVTGSMIVMWLSEIITEKGIGQGASLVIFL 194
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
I+ + L + + ++ LL VF I + + V EG R+
Sbjct: 195 NIVATLPKALSSTIEKAQTGDRNDVFGIIVLLIVFLITIVGIIFVQEGARR-------LP 247
Query: 258 LASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 314
+ SA R+ + + + Y+P +N G+ P++ + L+ P +A+ +P
Sbjct: 248 IVSAKRQIGGTALLPTRQSYLPLKLNAGGVMPIIFASALIFLPITIANFTKNPLLIQAAS 307
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKAT 372
LNP + A PW Y + + F F + P +IA L + G IP V+PG AT
Sbjct: 308 ALNPSS---ANPWPYAITFFALILGFAYFYASLTINPIDIAANLKRGGVAIPGVRPGSAT 364
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+YL+ +Q GGL L +A ++ + +G TS+LI+VG I+ +
Sbjct: 365 SKYLSGVQNRLTLLGGLFLGSVAIVPAAVERA-TNVQTFQGLGATSLLILVGVAIDTAKQ 423
Query: 433 YQAY 436
Q Y
Sbjct: 424 VQTY 427
>gi|415721825|ref|ZP_11468758.1| preprotein translocase subunit SecY [Gardnerella vaginalis
00703Bmash]
gi|415725169|ref|ZP_11470172.1| preprotein translocase subunit SecY [Gardnerella vaginalis
00703C2mash]
gi|388060530|gb|EIK83222.1| preprotein translocase subunit SecY [Gardnerella vaginalis
00703Bmash]
gi|388061974|gb|EIK84610.1| preprotein translocase subunit SecY [Gardnerella vaginalis
00703C2mash]
Length = 446
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 206/430 (47%), Gaps = 26/430 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++F E+R ++ +I+I RIG FIP+PG D ++I S S + +G
Sbjct: 6 QAFKTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVIRACTAKLASSSENFIGLVNLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 136 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+L++ + A ++ S+ ++V ++ G + W+ + I++ G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCGQVIPDGSMWSLIVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
QG S++I + I +G+ L+++ G + W F + + GVF ++ ++ V R+
Sbjct: 186 QGMSVLIFMSICSGFLPKLWEIGWGTNGLNGDWTKFSI-VAGVFLVILIFVDFVELAQRR 244
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY + S Y+P +N SG+ P + + +LA P++LA G
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAIPTLLAQ-FGDSR 298
Query: 309 WQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
V+ I N + W +Y + FF F + +I P E AD + + G IP
Sbjct: 299 KDWVRWI-NANLANSTSVWYIALYTVMIVFFCFFYT--EITFNPDETADNMKEYGGFIPG 355
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++ G AT YL+ + G + L +A T+L L +N G T++LII G
Sbjct: 356 IRAGSATSRYLSYVMNRLNTVGAIYLLFVALIPTVLIMSL-HLNMKLPFGGTTILIIAGV 414
Query: 426 IIELRRSYQA 435
++ R +A
Sbjct: 415 GLDTLRQAKA 424
>gi|283782774|ref|YP_003373528.1| preprotein translocase subunit SecY [Gardnerella vaginalis 409-05]
gi|415709554|ref|ZP_11463179.1| preprotein translocase subunit SecY [Gardnerella vaginalis 6420B]
gi|283441921|gb|ADB14387.1| preprotein translocase, SecY subunit [Gardnerella vaginalis 409-05]
gi|388056226|gb|EIK79102.1| preprotein translocase subunit SecY [Gardnerella vaginalis 6420B]
Length = 447
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 209/430 (48%), Gaps = 25/430 (5%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++F E+R ++ +I+I RIG FIP+PG D +++ + S S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVVHACTVKLASSSENFIGLVNLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 136 ILEAVIVACYSLPYSIYA--------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
IL++ + + +++ S+ ++V ++ G + W+ + I++ G
Sbjct: 126 ILQSTTILVTARTGALFNYQCGNNIIPDGSMWSLIVMVLIMTGGTGLIMWMAELITDKGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
GQG S++I + I +G+ L+++ GS+ W F + + GV ++ ++ V R
Sbjct: 186 GQGMSVLIFMSICSGFLPKLWEIGWGTNGSNGDWNKFAI-VGGVLIVILIFVDFVELAQR 244
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-S 306
++ +QY + S Y+P +N SG+ P + + +LA P+++A S
Sbjct: 245 RIPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAVPTLIAQFGDKS 299
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIY-AFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W + E N S A +YT+ FF F + +I P E AD + + G IP
Sbjct: 300 KAWVNWIE-ANLANSTSAWYIAFYTVMIVFFCFFYT--EITFNPDETADNMKEYGGFIPG 356
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++ G AT YL+ + G + L +A T+L L +N G T++LII G
Sbjct: 357 IRAGSATSHYLSYVMNRLNTVGAIYLLFVALIPTVLIMAL-HLNTKLPFGGTTILIIAGV 415
Query: 426 IIELRRSYQA 435
++ R +A
Sbjct: 416 GLDTLRQAKA 425
>gi|126658007|ref|ZP_01729159.1| protein translocase subunit SecY [Cyanothece sp. CCY0110]
gi|126620645|gb|EAZ91362.1| protein translocase subunit SecY [Cyanothece sp. CCY0110]
Length = 438
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 136/437 (31%), Positives = 215/437 (49%), Gaps = 38/437 (8%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDR-RLIPQDYLSFVSGSVDE 72
A E+F + + +R RL +T L+++ R G FIP+PG DR + + + V G +D
Sbjct: 10 TAQETFLQMAQAAGLRGRLLITIGLLILIRFGIFIPIPGIDRAKFVSAISNNQVLGFLDI 69
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 131
G L F LGI P I ASI+MQ+L +PSL L+K EG G KI +++
Sbjct: 70 FTGGGIS-TLGIFALGILPFINASIIMQLLTAAIPSLEDLQKNEGEAGRRKISQITRYVA 128
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
G+A++++ + L YA + ++ V T L G+M + W+ + I+E G G G+
Sbjct: 129 AGWAVIQSTAITVGLLRE--YALTDTIWFVPETVLALTAGSMFVMWVSELITERGIGNGA 186
Query: 192 SLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
SL+I V I+ TL + + +Q G +L L+ + IV + V V EG R++
Sbjct: 187 SLLIFVNIVASLPRTLGQTIDYAQTGGRQAVAQVVILLLVFLVMIVGI--VFVQEGTRRI 244
Query: 250 KLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 306
+ SA R+ E Y+P +N G+ P++ + +L P LA G
Sbjct: 245 PI-------ISARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLILPQSLAGFFGDE 297
Query: 307 -PFWQ---HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIADYLNKM 359
F Q V L P T WVY +Y+ + F+ F I N P++++ L KM
Sbjct: 298 GAFSQVLIQVANALRPGT------WVYVGVYSLLILFFSYFYASLIVN-PEDVSKNLKKM 350
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G+ IP ++PG+ T EYL + F G + LS +AT T+++ + +G TS+
Sbjct: 351 GSSIPGIRPGEKTKEYLEGVLNRLTFLGAIFLSFVATVPTLVEGAT-GVTTFRGLGATSL 409
Query: 420 LIIVGSIIELRRSYQAY 436
LI+VG I+ + Q Y
Sbjct: 410 LILVGVAIDTAKQIQTY 426
>gi|354558460|ref|ZP_08977715.1| preprotein translocase, SecY subunit [Desulfitobacterium
metallireducens DSM 15288]
gi|353546938|gb|EHC16385.1| preprotein translocase, SecY subunit [Desulfitobacterium
metallireducens DSM 15288]
Length = 429
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 135/448 (30%), Positives = 219/448 (48%), Gaps = 48/448 (10%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV-DEL 73
++++ ++ +EIR ++ T ++ +I RIG IP+P D ++ SGS+ D L
Sbjct: 2 IVDSLKNAWKVAEIRNKIGFTLLMFLIFRIGAHIPIPFMDHSVLSN---MIGSGSIFDFL 58
Query: 74 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW-- 129
F G+ + S F L I+P I ASI++Q+L +VP L L KEG G +KI Y +
Sbjct: 59 DTFSGGSFRRFSVFALSITPYITASIILQLLTIVVPYLEHLAKEGQYGRKKITQYTRYGT 118
Query: 130 ISLGF--------AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 181
+ LGF + A+++ SL + IY ++ A +L G + WI +
Sbjct: 119 VVLGFIQGFGLTYGLRTALVIPSPSLKWPIY---------LLVALILTAGTAFLMWIGER 169
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
I+E G G G SLII GI+ + L + L + ++GL+ + + V
Sbjct: 170 ITEKGIGNGISLIIFAGIVARVPDGLKYIWGLLKVGEINALS-VIGLVIMGAAIIAGVVF 228
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
+ EG R+V++QY A +IP +N SG+ P++ LLAFPS +A
Sbjct: 229 IQEGQRRVQVQY-----AKRVVGRRVYGGQSSHIPLKVNQSGVIPIIFAISLLAFPSTIA 283
Query: 302 SIL--GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLN 357
+ + S + Q + +V + P Y IYA + F F A P ++AD +
Sbjct: 284 TWMPATSGYVQFINRWFTMNGTVYSIP--YLIIYAMLIIFFTYFYTAVTFNPVDVADNIK 341
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++PG+AT +YL KI + GGL LS++A +++ L I + S+G T
Sbjct: 342 KYGGFIPGLRPGRATSDYLAKILSRLTLAGGLFLSLIAVLPSLIVG-LTGI-QNISLGGT 399
Query: 418 SVLIIVGSIIE---------LRRSYQAY 436
S+LI+V +E ++R YQ +
Sbjct: 400 SLLIVVSVALETMKQMESLLMQRHYQGF 427
>gi|170077667|ref|YP_001734305.1| preprotein translocase subunit SecY [Synechococcus sp. PCC 7002]
gi|169885336|gb|ACA99049.1| preprotein translocase SecY subunit [Synechococcus sp. PCC 7002]
Length = 439
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 217/438 (49%), Gaps = 39/438 (8%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL-SFVSGSVDE 72
A E+F + + +R RL VT L+V+ R G FIP+PG DR + + S + G +D
Sbjct: 10 TAQETFMQMAQAAGLRGRLLVTLGLLVLVRFGVFIPIPGIDRVALSEGIQNSPLLGFLDV 69
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 131
G + F LGI P I ASI+MQ++ +P+L ++K +G G KI I +++
Sbjct: 70 FAGGGLS-AVGIFALGILPYINASIIMQLMTAAIPALEDMQKNDGEAGRRKISQIIRYVT 128
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+G+A L++ + L YA V+ T L G++ + WI + I+E G G G+
Sbjct: 129 VGWAALQSFGITLQIL--RPYALDPGFTFVLETTLALTAGSVFVMWISELITEKGLGNGA 186
Query: 192 SLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
SL+I V I+ TL + +Q G +V +L L VF I+ + V V EG R++
Sbjct: 187 SLLIFVNIVAVLPRTLGNTIEFAQTGGRAVIAKVILL--LVVFLIMIVGIVFVQEGTRRI 244
Query: 250 KLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
+ SA R+ E Y+P +N G+ P++ + +L PS LA + GS
Sbjct: 245 PI-------VSARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLVLPSSLAGLAGSG 297
Query: 308 ---FWQHVKEI---LNPETSVGARPWV--YYTIYAFFVFLFNIFDIANLPKEIADYLNKM 359
F Q + I L P G P+V Y + FF + + I N P ++A L KM
Sbjct: 298 EGFFGQAIATISTLLQP----GRIPYVLVYLALILFFSYFYASL-IVN-PVDMAQNLKKM 351
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTS 418
G+ IP ++PG+AT EYL K+ G + L ++AT T ++ GF G TS
Sbjct: 352 GSSIPGIRPGRATSEYLEKVINRLTLLGAIFLGLVATVPTFVEGATGVTTLRGF--GATS 409
Query: 419 VLIIVGSIIELRRSYQAY 436
+LI+VG I+ + Q Y
Sbjct: 410 LLILVGVAIDTAKQIQTY 427
>gi|428203670|ref|YP_007082259.1| preprotein translocase subunit SecY [Pleurocapsa sp. PCC 7327]
gi|427981102|gb|AFY78702.1| preprotein translocase, SecY subunit [Pleurocapsa sp. PCC 7327]
Length = 438
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 219/438 (50%), Gaps = 40/438 (9%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF-VSGSVDE 72
A E+F + + +R RL +T L+++ R G IP+PG DR D + + G D
Sbjct: 10 TAQETFLQMAQAAGLRGRLLITLGLLILVRFGISIPIPGIDRARFSADIANLPIFGIFDF 69
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 131
L G + + F LGI P I ASI+MQ+L +P+L L+K EG G KI +++
Sbjct: 70 LTGGGLK-AVGLFALGILPYINASIIMQLLAAAIPALEDLQKNEGEAGRRKISQITRYVA 128
Query: 132 LGFAILEAVIVACYSL-PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
LG+AI++++ + L PY+I ++ V T L G+M + W+ + I+E G G G
Sbjct: 129 LGWAIIQSLGITIGLLRPYAI---NYGFWFVAQTVLALTAGSMFVMWVSELITERGIGNG 185
Query: 191 SSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
+SL+I + I+ +TL L+Q G +L L+ + TI+ + V V EG R+
Sbjct: 186 ASLLIFLNIVAVLPKTLGDTIDLAQTGGRDTIAKVVLLLLVFLVTIIMI--VFVQEGTRR 243
Query: 249 VKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG- 305
+ + SA R+ E Y+P +N G+ P++ + +L PS LA +
Sbjct: 244 I-------PIVSARRQVGKRLYRERTSYLPLRLNQGGVMPIIFASAVLFLPSTLAGLFSN 296
Query: 306 ----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIADYLNK 358
S V L P + W+Y +Y+ + F+ F I N P++++ L K
Sbjct: 297 QGNISQALVQVANTLQPGS------WIYIAVYSLMIIFFSYFYASLIVN-PEDVSKNLKK 349
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
MGA IP ++PG+AT +YL + F G + LS++A T+++ + +G TS
Sbjct: 350 MGASIPGIRPGEATTKYLQGVLNRLTFLGAIFLSVVAIVPTLVEGA-TGVTTFRGLGATS 408
Query: 419 VLIIVGSIIELRRSYQAY 436
+LI+VG I+ + Q Y
Sbjct: 409 LLILVGVAIDTAKQIQTY 426
>gi|289523349|ref|ZP_06440203.1| preprotein translocase, SecY subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503041|gb|EFD24205.1| preprotein translocase, SecY subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 430
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 211/425 (49%), Gaps = 27/425 (6%)
Query: 30 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLSFFQ 86
R LFV VL+V R+G IP PG D + + F G V L D GA + S F
Sbjct: 17 RILFVLGVLLVF-RLGAHIPTPGVDAKAMAS---LFEQGGVLSLFDLFAGGALRRFSIFA 72
Query: 87 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 146
LG++P I ASI+MQ+L +VP++ +++KEG +G KI Y ++ FA ++AV + +
Sbjct: 73 LGVTPYINASIVMQLLAVVVPAIEKMQKEGEEGRRKIVQYTRVSTILFAGIQAVGMVLWL 132
Query: 147 LPYS-IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 205
IY S+ +VT L+ G++ + W+ + IS+ G G G SL+I GI+ E
Sbjct: 133 RSMDIIYVGGISIVVAIVT---LIAGSIAVMWMGEMISDHGIGNGISLLIFAGIVARIPE 189
Query: 206 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 265
+ + + L + + ++ + + +V +++ EG R++ +QY + +
Sbjct: 190 AIMRTFTLLRTGEMNFLT-LIIAIAIMIVVIAGCILLQEGQRRLPVQYAKRVVGTRVYGG 248
Query: 266 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGAR 325
+IP +N +G+ P++ + +L FP+ +A + F Q + I +P +
Sbjct: 249 Q-----STFIPLRVNSAGVIPIIFASSVLLFPTTVARFFSAGFAQTIAGIFSPSSP---- 299
Query: 326 PWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQAST 383
+Y +Y + F F A + P ++A+ L K G IP ++PG+ T +Y+ ++ +
Sbjct: 300 --IYMILYVLLIIFFTYFYTAVVFNPVDVANNLKKYGGFIPGIRPGRPTADYIERVLSRV 357
Query: 384 RFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLS 443
G + L+ +A ++L L F G T+VLI+VG +E + +A +M
Sbjct: 358 TLGGAVFLAGIALLPSLLTQMLGITT--FYFGGTAVLIVVGVALETVQQIEAQLLMRHYE 415
Query: 444 KALRR 448
++R
Sbjct: 416 GIMKR 420
>gi|428768903|ref|YP_007160693.1| protein translocase subunit SecY [Cyanobacterium aponinum PCC
10605]
gi|428683182|gb|AFZ52649.1| protein translocase subunit secY/sec61 alpha [Cyanobacterium
aponinum PCC 10605]
Length = 437
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 132/434 (30%), Positives = 216/434 (49%), Gaps = 33/434 (7%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVD 71
A E+F + + +R RL +T L+++ R+G +IP+PG DR L F+ G +D
Sbjct: 10 TAQETFLQMAQAAGLRSRLLITLGLLILVRLGIYIPVPGIDRDAFAAAIQNLPFL-GFLD 68
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWI 130
G + F LGI P I ASI+MQ++ VP+L L+K EG G KI ++
Sbjct: 69 IFTGGGLS-TIGIFALGILPYINASIIMQLMTSAVPALEDLQKNEGEMGRRKIAQITRYV 127
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
+LG+AI+++ V L YA + S V+ T + G+M + WI + I+E G G G
Sbjct: 128 ALGWAIIQSTGVTVGLL--RPYALNDSPWFVVETVLAITAGSMFVMWISEVITERGLGNG 185
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
+SL+I V I+ +TL + + + L+ VF ++ + V V EG R++
Sbjct: 186 ASLLIFVNIVAVLPQTLANTIDYAQTGGRQAIAQVTILVLVFLVMIVGIVFVQEGTRRIP 245
Query: 251 LQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ SA R+ E Y+P +N G+ P++ + +L PS S+ G
Sbjct: 246 I-------ISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLVLPS---SVSGFAE 295
Query: 309 WQHVKEILNPETSVGARP---WVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARI 363
++N + ++ RP W Y +Y+ + F+ F + + P++IA L KMG I
Sbjct: 296 NTAFSGVVN-QVALALRPGSIW-YVVVYSVLILFFSYFYASLVSNPEDIAQNLKKMGTSI 353
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLII 422
P ++PGKAT+ YL + G + L+++AT T ++ +GF G TS+LI+
Sbjct: 354 PGIRPGKATVAYLEGVLNRLTLLGAIFLTVVATVPTFVERATGVTTFQGF--GATSLLIL 411
Query: 423 VGSIIELRRSYQAY 436
VG I+ + Q Y
Sbjct: 412 VGVAIDTAKQVQTY 425
>gi|374578966|ref|ZP_09652060.1| preprotein translocase, SecY subunit [Desulfosporosinus youngiae
DSM 17734]
gi|374415048|gb|EHQ87483.1| preprotein translocase, SecY subunit [Desulfosporosinus youngiae
DSM 17734]
Length = 428
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 136/435 (31%), Positives = 209/435 (48%), Gaps = 45/435 (10%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
S++R+++ T ++ +I RIG IP P DR + Q F SG++ D G+ L
Sbjct: 13 SDLRKKIGYTLLMFLIFRIGAHIPTPFIDRDTLNQ---MFGSGAMMNFMDTISGGSFKSL 69
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F L I+P I ASI++Q+L ++P+L +L KEG G +KI Y + ++G ++A+
Sbjct: 70 SVFALSITPYITASIILQLLTIVIPTLERLSKEGDYGRKKITQYTRYSTVGLGFIQAL-- 127
Query: 143 ACYSLPYSIYAASHSVKHVM------VTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
L Y I AA + M + A +L G + WI + I+E G G G SLII
Sbjct: 128 ---GLTYGIRAAVNISSPAMQWPTYLLIALVLTAGTAFLMWIGEAITEKGIGNGISLIIF 184
Query: 197 VGILT---GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
GI++ +L+ ML +G L L+ F +T + V EG R+V +QY
Sbjct: 185 AGIVSRVPSAIRSLWDMLR--VGEINILSIIGLILIVAF--ITAGVIYVQEGQRRVTVQY 240
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS-ILGSPFWQHV 312
A +IP +N +G+ PV+ LLAFP +AS S F + V
Sbjct: 241 -----AKRVVGRRVYGGQSSHIPLKVNQAGVIPVIFAMSLLAFPQTIASWTPTSGFARFV 295
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGK 370
+ S+ + P Y +Y + F F I P ++AD L K G IP ++PG+
Sbjct: 296 NTWFSMNGSITSIP--YLLLYGALILFFTYFYTSITFNPVDVADNLKKYGGFIPGLRPGR 353
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE-- 428
T EYL+K+ GGL L+++A T++ N F G TS+LI+VG ++
Sbjct: 354 PTAEYLSKVLNRITLAGGLFLALIAVLPTLVIGLTGLKNIYF--GGTSLLIVVGVALDTM 411
Query: 429 -------LRRSYQAY 436
+ R YQ +
Sbjct: 412 KQIESQLMSRHYQGF 426
>gi|288574682|ref|ZP_06393039.1| preprotein translocase, SecY subunit [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570423|gb|EFC91980.1| preprotein translocase, SecY subunit [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 410
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 201/417 (48%), Gaps = 26/417 (6%)
Query: 38 LIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLSFFQLGISPQIV 94
++ + R+G IP PG D + F G V D GA + S F LG++P I
Sbjct: 3 MLFVFRLGAHIPTPGIDSAAMAH---LFEGGGVLGFLDMFAGGALRRFSIFALGVAPYIN 59
Query: 95 ASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAA 154
ASI+MQ+L + P+L +++KEG +G +KI +LGFA ++AV + + +++
Sbjct: 60 ASIVMQLLVVVFPALEKMQKEGPEGQKKIIQITRLSTLGFAAIQAVGMVFWLQRVGVFSG 119
Query: 155 SHSVKHVMVTAFL-LVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQ 213
MVTA L ++ GA+ + W+ + IS+ G G G SL+I GI+ E + +
Sbjct: 120 G---ALGMVTAILTIIAGAIAVMWLGEEISDHGIGNGISLLIFAGIVARIPEATIRTWNM 176
Query: 214 LLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEP 273
L + +L L+ V +V +V+ EG R++ +QY A +
Sbjct: 177 LHLGELHALIVLLALM-VMIVVVAGCIVLQEGQRRLPVQY-----AKKVVGNKVYGGQST 230
Query: 274 YIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIY 333
+IP +N G+ P++ + +L FP + ++ +L P + W+Y +Y
Sbjct: 231 FIPLKVNQGGVMPIIFASSILIFPYTVLKFFSGDIAIKMQNMLAPGS------WLYSVLY 284
Query: 334 AFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLL 391
+ F F A + P ++A+ + K G I ++PGK T +Y+ K+ + G L L
Sbjct: 285 VTLILFFAYFYTAMVFNPSDVANNMKKYGGFILGIRPGKPTSDYIEKVMSRITLGGALFL 344
Query: 392 SILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+++A T++ + + + F G T+VLI+VG ++L + +M L+R
Sbjct: 345 AVIALIPTVMTNLMGITS--FYFGGTAVLIVVGVALDLVHQVEGQLLMRHYEGILKR 399
>gi|20808641|ref|NP_623812.1| preprotein translocase subunit SecY [Thermoanaerobacter
tengcongensis MB4]
gi|20517275|gb|AAM25416.1| Preprotein translocase subunit SecY [Thermoanaerobacter
tengcongensis MB4]
Length = 418
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 207/433 (47%), Gaps = 37/433 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 80
+IRRR+ T ++VI R+G IP+PG D + I + G G F GA
Sbjct: 12 DDIRRRILYTLGMLVIFRLGSHIPVPGIDPKQIAN-----ILGQGQLFGFFDIISGGAFR 66
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+ F + I P I ASI+MQ+L +PSL QL KEG +G +KI Y ++++ A+++A+
Sbjct: 67 NFTIFAMSIVPYINASIIMQLLTIAIPSLEQLAKEGEEGRKKIAQYTRYLTVVLALIQAI 126
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ I + +++T L G + W+ + I+E+G G GSSLII GI+
Sbjct: 127 GMTIGLRSAVINPTFFRLTVIVIT---LTAGTTFLMWLGERITENGLGNGSSLIIFAGII 183
Query: 201 TGYTETLYKMLSQLLGSSVRWW---PFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
+ +Y + + + F++ L I+ + ++ TEG R++ +QY
Sbjct: 184 SRIPNMIYLTHEYIKAGTSNIFGAIAFVVAEL----IMIVLIILATEGQRRIPVQY---- 235
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEIL 316
A +IP IN +G+ P++ LL FP LA+ S F+ V++ L
Sbjct: 236 -AKRVVGRRVYGGQSTHIPIRINMAGVIPIIFAISLLQFPQQLATFFPHSSFYNFVQKWL 294
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
+ +Y + F + F F A + P++I+D L K G IP ++PGK T E
Sbjct: 295 S------TNGLIYNLLDIFLIIGFTYFYTAVIFNPQDISDNLKKYGGFIPGIRPGKPTTE 348
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
YLTK+ F G L L+ +AT +L + G T++LI VG ++ + +
Sbjct: 349 YLTKVLNRIVFVGALFLAFIATMPVVL---MNVTGLQLYFGGTALLIAVGVALDTMKQIE 405
Query: 435 AYNVMPSLSKALR 447
+ +M + L+
Sbjct: 406 GHLIMRNYQGFLK 418
>gi|387769776|ref|ZP_10125973.1| preprotein translocase, SecY subunit [Pasteurella bettyae CCUG
2042]
gi|386905946|gb|EIJ70696.1| preprotein translocase, SecY subunit [Pasteurella bettyae CCUG
2042]
Length = 441
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 208/434 (47%), Gaps = 28/434 (6%)
Query: 26 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKGRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +LG A L+A+ +
Sbjct: 76 SIFALGIMPYISASIIIQLLTTVYPALNELKKEGESGRRKISKYTRYATLGLATLQAIGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + + Q + +L + VF VT + V G R++K++Y A
Sbjct: 195 AGLPAAIGQTIEQARQGQMHLLVLLLIAVVVFA-VTYFVVFFERGQRRIKVEY-----AK 248
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 316
+ + ++P +N +G+ P + + ++ FP+ L G + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWFGQGSSLEWLTDLSMLL 308
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
+P +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 309 SP-----GQP-LYLIVYAIAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSR 362
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ KI GGL ++ + I+ + N F G TS+LI+V I++ Q
Sbjct: 363 YIDKIMTRLTLIGGLYITFVCLVPYIM---MSAWNVQFYFGGTSLLIVVVVIMDFIVQIQ 419
Query: 435 AYNVMPSLSKALRR 448
++ + AL++
Sbjct: 420 SHLMSTKYESALKK 433
>gi|33864017|ref|NP_895577.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9313]
gi|33635601|emb|CAE21925.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9313]
Length = 439
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 202/418 (48%), Gaps = 21/418 (5%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
E+R R+ T L++ R+G +IP+PG DR Q +L + L F G L
Sbjct: 23 ELRGRVLTTLGLLLFIRLGIYIPMPGIDRVAF-QSFLQQGGQLIGFLDIFTGGGISTLGI 81
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+ ++++VI A
Sbjct: 82 FALGILPFINASIILQLLTAALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLVQSVIFA 141
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
Y++ S V V+ TA LV G+M + W+ + I++ G GQG+SL+I + I+
Sbjct: 142 LILRQYAVEGLSEVV-FVVQTALALVTGSMIVMWMSEIITDRGIGQGASLVIFLNIVATL 200
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 263
+ L + + ++ L+ VF + + + V EG R+ + SA R
Sbjct: 201 PKALASTIEKAQTGDRGDVVGIIVLVMVFLMTIVGIIFVQEGSRR-------LPIVSAKR 253
Query: 264 E---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
+ + + + Y+P +N G+ P++ + L+ P +A+ +P LNP
Sbjct: 254 QIGGTNLLPNRQSYLPLKLNAGGVMPIIFASALIFLPITIANFTKNPLLIRAASTLNPSA 313
Query: 321 SVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTK 378
A PW Y ++ + F+ F + P +IA L + G IP V+PG AT YL+
Sbjct: 314 ---ANPWPYALVFFALIVGFSYFYASLTINPIDIATNLKRGGVAIPGVRPGSATANYLSG 370
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+Q GGL L +A ++ + +G TS+LI+VG I+ + Q Y
Sbjct: 371 VQNRLTLLGGLFLGAVAIIPAAVERA-TNVQTFQGLGATSLLILVGVAIDTAKQVQTY 427
>gi|260438196|ref|ZP_05792012.1| preprotein translocase, SecY subunit [Butyrivibrio crossotus DSM
2876]
gi|292809388|gb|EFF68593.1| preprotein translocase, SecY subunit [Butyrivibrio crossotus DSM
2876]
Length = 443
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 218/446 (48%), Gaps = 43/446 (9%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
A +F EIR R+ T +++++ RIG +P+PG +R S G L +
Sbjct: 6 ANAFKVKEIRNRIIFTFIMLIVVRIGSILPIPGINR----DQLASIFQGDGSALANAFTG 61
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA L++S F L I+P I +SI++Q+L +P L +++K+G DG +KI++ ++++ A+
Sbjct: 62 GALLQMSVFALSITPYITSSIIVQLLTIAIPKLEEMQKDGEDGRKKIQTITRFVTVALAL 121
Query: 137 LEAV-IVACYSLP-----YSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
+E++ +V + YS AA V+ ++ +L G+ + W+ + I+E G G G
Sbjct: 122 IESIAMVVGFGKSGLIEGYSTMAALERVRVSVMIVAILTAGSTLLMWLGERITERGVGNG 181
Query: 191 SSLIICVGILTGYTE---TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVT-MWAVVVTEGC 246
S+I+ + I++ E LYK S + G SV + ++ + T ++ V++ G
Sbjct: 182 ISIILVINIVSRLPEDFVALYK--SFVKGQSVLNATIAIVVILAVVVGTILFTVLLCGGE 239
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R++ +QY + + IP +N +G+ PV+ L+ FP I+ I+
Sbjct: 240 RRIPVQY-----SKKVQGRRTYGGNSSNIPLKVNTAGVIPVIFAQSLMTFPLIIMQIV-K 293
Query: 307 PFWQHVKEILNPETSVGARPW-------------VYYTIYAFFVFLFNIFDIANLPKEIA 353
P + + ++ + W +Y + FF + + P EIA
Sbjct: 294 PNFDYSSVGGKIIRALSSNNWFNRNNMILTLGVILYIVLIVFFAYFYTSLTFN--PLEIA 351
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS 413
+ + K G IP ++PGKAT +YLTKI F G + L+++A + N S
Sbjct: 352 NNMKKSGGFIPGIRPGKATSDYLTKILNRIIFIGAIGLTVVALIPVVFSGLF---NANVS 408
Query: 414 IGFTSVLIIVGSIIELRRSYQAYNVM 439
G TS++IIVG I+E R ++ V+
Sbjct: 409 FGGTSIIIIVGVILETIRQIESQMVV 434
>gi|392423914|ref|YP_006464908.1| protein translocase subunit secY/sec61 alpha [Desulfosporosinus
acidiphilus SJ4]
gi|391353877|gb|AFM39576.1| protein translocase subunit secY/sec61 alpha [Desulfosporosinus
acidiphilus SJ4]
Length = 428
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 213/441 (48%), Gaps = 57/441 (12%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFVSGSVDELGDFG 77
+++R+++ T ++ +I RIG IP+P + ++ D++ +SG G
Sbjct: 13 ADLRKKIGYTLLMFLIFRIGAHIPIPFVNHEVLKNMLGTGGMFDFMDTLSG--------G 64
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGF- 134
+ +L+ F L I+P + ASI++Q+L ++PSL +L KEG G +KI Y + ++LGF
Sbjct: 65 SFKRLTVFALSITPYVTASIILQLLTIVIPSLERLSKEGEYGRKKITQYTRYGTVALGFI 124
Query: 135 -------AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
I A++V + +++Y ++ A +L G + W+ + I+E+G
Sbjct: 125 QAFGLTFGIRTALMVPSSAWKWAVY---------LLVALVLTAGTAFLMWLGEAITENGV 175
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G G SLII GI++ L + S + + +LGL + + + V EG R
Sbjct: 176 GNGISLIIFAGIVSRVPSALGYLYSLFTVHEINIFS-LLGLAVIVVFIIAGVIYVQEGTR 234
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GS 306
+V +QY A +IP +N +G+ PV+ LLAFP +A+ + S
Sbjct: 235 RVSVQY-----AKRVVGRRVYGGQSSHIPLKVNQAGVIPVIFAISLLAFPQTIATWMPTS 289
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
F + V + +V + P Y +Y + F F A P ++AD L K G IP
Sbjct: 290 GFARFVNTWFSMNGTVQSIP--YLLVYGVLIIFFTYFYTAVTFNPADVADNLKKYGGFIP 347
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG+ T EYL+KI + GG+ L+++A TI+ N F G TS+LI+VG
Sbjct: 348 GLRPGRPTAEYLSKILSRITLAGGIFLALIAILPTIVMGLTGLKNIYF--GGTSLLIVVG 405
Query: 425 SIIE---------LRRSYQAY 436
+E + R YQ +
Sbjct: 406 VALETMKQIESQLMSRHYQGF 426
>gi|237804861|ref|YP_002889015.1| preprotein translocase subunit SecY [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231273161|emb|CAX10074.1| protein translocase subunit [Chlamydia trachomatis B/TZ1A828/OT]
Length = 457
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 226/457 (49%), Gaps = 41/457 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 76
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRLFTLVL 125
Query: 135 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A ++L P + A S+K + T +++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMITGTLLLMWVGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF----MLGLLGVFTIVTM 237
IS+ G G G SLII +GIL + L + ++L S F +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGILACFPSVLGSIFNKLNLGSQDPSEFGIVSLLILCAVFVFVLM 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
V++ EG RK+ +Q+ + RE + Y+P +N +G+ PV+ + LL FP
Sbjct: 246 ATVLIIEGMRKIPVQHA--RRIIGRRE---VVGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 298 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTI-YAFFVFLFNIFDIANL--PKEI 352
+ + L S + + + +L+P + V Y+I Y + F F A P++I
Sbjct: 301 ATIGQFLSSESSWLKRIATMLSPGS-------VAYSIFYVLLIIFFTYFWTATQFRPEQI 353
Query: 353 ADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEG 411
A + K GA IP ++ GK T YL G + L+++A +IL LR N
Sbjct: 354 ASEMKKNGAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVVAILPSILGRILRVDANVS 413
Query: 412 FSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+ +G T++LI+VG I++ + A+ ++ L++
Sbjct: 414 YFLGGTAMLIVVGVILDTMKQIDAFLLVRRYDGVLKK 450
>gi|329122804|ref|ZP_08251376.1| preprotein translocase subunit SecY [Haemophilus aegyptius ATCC
11116]
gi|327472068|gb|EGF17506.1| preprotein translocase subunit SecY [Haemophilus aegyptius ATCC
11116]
Length = 441
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 207/435 (47%), Gaps = 28/435 (6%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 143 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 259
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 315
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
LNP +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTS 361
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
Y+ K+ GGL ++ + I+ + F G TS+LI+V I++
Sbjct: 362 RYIDKVMTRLTLIGGLYVTFVCLVPYIMTSAW---DVKFYFGGTSLLIVVVVIMDFIVQV 418
Query: 434 QAYNVMPSLSKALRR 448
Q++ + AL++
Sbjct: 419 QSHLISSQYESALKK 433
>gi|310659482|ref|YP_003937203.1| preprotein translocase membrane subunit [[Clostridium] sticklandii]
gi|308826260|emb|CBH22298.1| preprotein translocase membrane subunit [[Clostridium] sticklandii]
Length = 424
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 209/423 (49%), Gaps = 29/423 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG--SVDELGDFGAELKLSF 84
++R++L T +++V+ RIG IP+PG + +I Q +S +G S ++ GA +
Sbjct: 13 DLRKKLVFTFLMLVVFRIGTAIPVPGINVDVIKQ-MISQQAGILSFYDIVAGGAFSNFTI 71
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
F L I+P I +SI++Q+L +P+L ++K G +G +KI Y ++++ A+++A +
Sbjct: 72 FALSITPYITSSIVIQLLTVAIPALEDMQKSGEEGRKKILQYTRYLTVVLALIQATAIGI 131
Query: 145 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 204
++ S S+ + L G + W+ + I+E G G G SL+I GI++
Sbjct: 132 GFFNSAL--VSDSILSKISVVLTLTAGTAFLMWLGEQITEKGIGNGISLLIFAGIVSRIP 189
Query: 205 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV----VTEGCRKVKLQYYGFKLAS 260
+ + + + + +GVF I+++ +V V +G RK+ +QY A
Sbjct: 190 QATVQTFELVKSGELNFIQ-----VGVFLIISVAIIVGVILVLQGVRKIPVQY-----AK 239
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
+IP +N +G+ PV+ LLAFP L + +P +Q ++
Sbjct: 240 RVVGRKTYGGQSTHIPLKVNQAGVIPVIFAVSLLAFPQTLGIFIKNPEYQ---AFVSKWF 296
Query: 321 SVGARPWVY-YTIYAFFVFLFNIF---DIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
+ P +Y YT+ F + +F + I P E+AD + IP ++PGK+T EYL
Sbjct: 297 TASGNPGIYVYTLMEFLLVVFFTYFYISITFKPDEVADNMKNSNGFIPGIRPGKSTEEYL 356
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
++ G + L+++A+ TI+ N F G TS+LI+VG IE + +A
Sbjct: 357 ARVLNRLTLAGAVFLALIASLPTII---YAATNIPFRFGGTSLLIVVGVAIETMKQIEAQ 413
Query: 437 NVM 439
VM
Sbjct: 414 MVM 416
>gi|383809644|ref|ZP_09965159.1| preprotein translocase, SecY subunit [Rothia aeria F0474]
gi|383447460|gb|EID50442.1| preprotein translocase, SecY subunit [Rothia aeria F0474]
Length = 435
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 204/428 (47%), Gaps = 34/428 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAE 79
+++RR+L T +IVI R+G FIP PG + Q + +GS + D GA
Sbjct: 12 ADLRRKLLFTLGMIVIYRMGTFIPAPGISYGTVQQCIAN--NGSNHGIYDIVNLFSGGAL 69
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
L+LS F LG+ P I ASI++Q+L ++P +L EG G K+ Y ++++ A+L
Sbjct: 70 LQLSIFALGVMPYITASIIIQLLRVVIPRFQELHDEGAQGQAKLTQYTRYLTIALALLNG 129
Query: 140 VIVACYSLPYSIYAASHSVK------HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
+ + ++ ++ HV++ L G + W+ + I+E G G G SL
Sbjct: 130 TTIVSMARSGALIGNCPNIIPVDDIWHVLLIIITLCAGTTVIMWMGEQITERGVGNGMSL 189
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
+I I + + L + Q G+ V W + GV +V + V V + R+V +QY
Sbjct: 190 LIFTSIASSFPNALGAIERQ-QGAMVFW-----AVCGVGLVVMLAVVYVEQSVRRVPVQY 243
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI----LGSPFW 309
A I YIP +N +G+ P++ + LL+ P I+A + GSP
Sbjct: 244 -----AKRMIGRRTIGGTSTYIPLKVNMAGVIPLIFASSLLSLPGIIAQLNTPNNGSPPP 298
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVK 367
+ V I N G P +Y T+Y F + F F ++ P E+AD + K G IP V+
Sbjct: 299 EWVSWI-NTYLVRGDHP-LYITLYFFLILGFTYFYVSVTFDPVEVADNMKKYGGFIPGVR 356
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
GK T YL+ + G L L++++ ++ L + N+ F G S+LI+VG +
Sbjct: 357 AGKPTERYLSYVLNRITLPGSLYLAVISMIP-LVALILFQANQNFPFGGASLLIVVGVGL 415
Query: 428 ELRRSYQA 435
+ + A
Sbjct: 416 DTLKQINA 423
>gi|90020626|ref|YP_526453.1| protein translocase subunit secY/sec61 alpha [Saccharophagus
degradans 2-40]
gi|89950226|gb|ABD80241.1| protein translocase subunit secY/sec61 alpha [Saccharophagus
degradans 2-40]
Length = 447
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 204/422 (48%), Gaps = 25/422 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
E+ RL + I I R+G IP+PG D I Q + + L F GA ++S
Sbjct: 16 GELWARLKFLLLAIFIYRLGTHIPVPGIDPEQIAQMFNRNQGTFLGMLNMFSGGAWERMS 75
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-VIV 142
LGI P I ASI+MQ++ + PSL L+KEG G KI Y ++++ A+++A V+V
Sbjct: 76 ILALGIMPYISASIIMQMMAAVTPSLEALKKEGESGRRKISQYTRYLTVALALIQAFVMV 135
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
A + YA + ++ LV GA+ M W+ + ++E G G G S++I GI+ G
Sbjct: 136 AGLAGQGMAYAGLAPLSFYVIAVTSLVTGAVFMMWLGEQVTERGIGNGISMLIFAGIVAG 195
Query: 203 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLASA 261
+ + + P L +G+ + +W VV E G R++ +QY
Sbjct: 196 LPGAVGQAFESARQGDLH--PIALLAIGLAAVAIVWFVVRMERGQRRITIQY-------- 245
Query: 262 AREDS---PITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
AR S + ++P IN +G+ PV+ + +L FP+ +A G+ IL
Sbjct: 246 ARRQSGRQAYSAQTSHLPLKINMAGVIPVIFASSILLFPASIAQWFGNASEGKTAVILQE 305
Query: 319 -ETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEY 375
++G W+ + ++ + LF A + PKE+AD L + GA IP ++PG + +Y
Sbjct: 306 IALALGPGQWLNFVVFGALIILFCFVYTAMMYNPKEVADNLKRGGAYIPGIRPGDQSAKY 365
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLRRINE-GFSIGFTSVLIIVGSIIELRRSYQ 434
+ + G L ++ +A +L +L + F +G TS+LI+V +++ Q
Sbjct: 366 IDGVLTRLTVVGSLYIAAVA----LLPQFLMVAADVPFYLGGTSLLIVVVVVMDFMSQVQ 421
Query: 435 AY 436
++
Sbjct: 422 SH 423
>gi|113460229|ref|YP_718286.1| preprotein translocase subunit SecY [Haemophilus somnus 129PT]
gi|112822272|gb|ABI24361.1| protein translocase subunit secY/sec61 alpha [Haemophilus somnus
129PT]
Length = 441
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 215/445 (48%), Gaps = 32/445 (7%)
Query: 17 NNAAESFFKSEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 75
N + SE++ RL FV LIV RIG FIP+PG D ++ Q L G++ ++ +
Sbjct: 8 QNRSTQSGTSELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQ-LLEQQKGTIIDMFN 65
Query: 76 F---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
GA + S F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L
Sbjct: 66 MFSGGALSRASIFALGIMPYISASIIIQLLTTVHPALAELKKEGEAGRRKISKYTRYSTL 125
Query: 133 GFAILEAVIVAC---YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
A ++A+ ++ LP + S V + LV G M + W+ + I+E G G
Sbjct: 126 ALATIQAIGISTGLPNMLPGLVPNLGFSFYFTAVIS--LVTGTMFLMWLGEQITERGIGN 183
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
G SLII GI+ G + + + Q + +L + VF VT + V G R++
Sbjct: 184 GISLIIFAGIVAGLPSAIGQTIEQARQGQMHLLVLLLIAVIVFA-VTYFVVFFERGQRRI 242
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS--- 306
K++Y A + + ++P +N +G+ P + + ++ FP+ L S G
Sbjct: 243 KVEY-----AKRQQGRQIVGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTSWFGQGSN 297
Query: 307 -PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARI 363
+ + +L+P +P +Y +YA + F+ F A P++ AD L K GA I
Sbjct: 298 LEWLTELSLLLHP-----GQP-LYLIVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFI 351
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PG+ T Y+ KI GGL ++ + I+ N F G TS+LI+V
Sbjct: 352 PGIRPGEQTSRYIDKIMTRLTLIGGLYITFVCLVPYIMTSAW---NVQFYFGGTSLLIVV 408
Query: 424 GSIIELRRSYQAYNVMPSLSKALRR 448
I++ Q++ + AL++
Sbjct: 409 VVIMDFIVQIQSHLMSTKYESALKK 433
>gi|116075749|ref|ZP_01473008.1| preprotein translocase SecY [Synechococcus sp. RS9916]
gi|116067064|gb|EAU72819.1| preprotein translocase SecY [Synechococcus sp. RS9916]
Length = 435
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 210/432 (48%), Gaps = 35/432 (8%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG----- 74
+++ E+R R+ T L+++ RIG +IP+PG DR + F+ G + +G
Sbjct: 16 SQAVTSPELRNRILTTIGLLLLVRIGIYIPMPGIDRV----RFQEFLQGGGNLIGFLDIF 71
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLG 133
G L F LGI P I ASI+MQ+L +P L L+K EG G KI +++LG
Sbjct: 72 TGGGVSSLGVFALGILPFINASIIMQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALG 131
Query: 134 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
+ ++++V+ A Y+ S V V+ TA LV GAM + WI + I+E G GQG+SL
Sbjct: 132 WGLIQSVVFALILKQYATEGLSEVV-FVIQTALALVTGAMVVMWISEVITERGIGQGASL 190
Query: 194 IICVGILTGYTETLYKMLSQL-LGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKL 251
+I + I+ TL +SQ LG R L L + + T+ +V V E R+
Sbjct: 191 VIFLNIVATLPSTLGNAISQAQLGG--RQAVIGLATLTLVFLATIVGIVFVQEASRR--- 245
Query: 252 QYYGFKLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ SA R+ + + Y+P +N G+ P++ + +L P+ LA + +
Sbjct: 246 ----LPIVSAKRQIGGTGTLPSRQSYLPMKLNAGGVMPIIFASAMLFLPATLAQVTKQEW 301
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNV 366
+ P + YY +Y + F+ F + P +IA L + G IP V
Sbjct: 302 LAQAVGAIQPGKT------AYYVLYFALILGFSYFYASLTLNPTDIASNLKRGGVAIPGV 355
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PG AT Y++ +QA GGL L + ++L++ + G +G TS+LI+VG
Sbjct: 356 RPGTATANYISGVQARLTLLGGLFLGAVVIIPSLLENSSGIVLGG--LGSTSLLILVGVA 413
Query: 427 IELRRSYQAYNV 438
IE + + Y V
Sbjct: 414 IETAKQVKTYVV 425
>gi|415712858|ref|ZP_11465016.1| preprotein translocase subunit SecY [Gardnerella vaginalis 55152]
gi|388056755|gb|EIK79614.1| preprotein translocase subunit SecY [Gardnerella vaginalis 55152]
Length = 446
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 206/430 (47%), Gaps = 26/430 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++F E+R ++ +I+I RIG FIP+PG D ++I S S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVIRACTAKLASSSENFIGLVNLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 136 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
IL++ + A ++ S+ ++V ++ G + W+ + I++ G G
Sbjct: 126 ILQSTTILVTARSGALFNYQCGQVIPDGSMWSLLVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
QG S++I + I +G+ L+++ G++ W F + + GV ++ ++ V R+
Sbjct: 186 QGMSVLIFMSICSGFLPKLWEIGWGTNGTNGDWTKFSI-VGGVLLVILIFVDFVELAQRR 244
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY + S Y+P +N SG+ P + + +LA P++LA G
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAIPTLLAQ-FGDSR 298
Query: 309 WQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
V+ I N + W +Y + FF F + +I P E AD + + G IP
Sbjct: 299 KDWVRWI-NANLANSTSVWYIALYTVMIVFFCFFYT--EITFNPDETADNMKEYGGFIPG 355
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++ G AT YL+ + G + L +A T+L L +N G T++LII G
Sbjct: 356 IRAGSATSRYLSYVMNRLNTVGAVYLLFVALIPTVLIMSL-HLNMKLPFGGTTILIIAGV 414
Query: 426 IIELRRSYQA 435
++ R +A
Sbjct: 415 GLDTLRQAKA 424
>gi|357419506|ref|YP_004932498.1| protein translocase subunit secY/sec61 alpha [Thermovirga lienii
DSM 17291]
gi|355396972|gb|AER66401.1| protein translocase subunit secY/sec61 alpha [Thermovirga lienii
DSM 17291]
Length = 431
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 212/439 (48%), Gaps = 24/439 (5%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+LN ++F +++RR+ T ++ I R+G IP PG D + + F GS
Sbjct: 1 MLNAMKDAFRLPDLKRRILFTLAVLFIYRLGAHIPTPGIDTEAMAR---LFGEGSALNFL 57
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
D GA + S F LG++P I ASI+MQ+L I P+L +L+KEG G +KI Y +
Sbjct: 58 DLFAGGALRRFSIFALGVAPYINASIVMQLLVVIFPALEKLQKEGEQGRKKIVQYTRLGT 117
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+ FA ++A+ + + ++ S SV +M+ + G++ + W+ + +S+ G G G
Sbjct: 118 VFFAAVQALGMTFWLRNLGVF--SGSVLDMMIVVITITTGSVVVMWLGEEVSDHGIGNGI 175
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SL+I GI+ E + + S + + + +L + V +V V++ EG R++ +
Sbjct: 176 SLLIFAGIVARIPEAIVRTWSMVRLGEMSFL-VLLIAIIVMVVVVAGCVLLQEGQRRLPV 234
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
QY A + +IP +N +G+ P++ + +L FP +
Sbjct: 235 QY-----AKRVVGNKVYGGQSTFIPLRVNQAGVIPIIFASSVLLFPYTVTRFFSGDIASK 289
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 369
++ IL+P + VY +Y + F+ F A + P + A+ + K G I ++PG
Sbjct: 290 IQAILSPGSV------VYMVLYVGLIIFFSYFYTAVVFDPVDTANNMKKYGGFILGIRPG 343
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
K T EY+ K+ + G + L+ +A TI+ + F G T+VLI+VG ++
Sbjct: 344 KPTAEYIEKVMSRITLGGAVFLAAVALLPTIMTRLMGITT--FYFGGTAVLIVVGVALDT 401
Query: 430 RRSYQAYNVMPSLSKALRR 448
+A +M L+R
Sbjct: 402 VHQIEAQLLMRHYEGILKR 420
>gi|415704840|ref|ZP_11460111.1| preprotein translocase subunit SecY [Gardnerella vaginalis 75712]
gi|388051562|gb|EIK74586.1| preprotein translocase subunit SecY [Gardnerella vaginalis 75712]
Length = 446
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 206/430 (47%), Gaps = 26/430 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++F E+R ++ +I+I RIG FIP+PG D ++I S S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVIRACTAKLASSSENFIGLVNLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 136 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
IL++ + A ++ S+ ++V ++ G + W+ + I++ G G
Sbjct: 126 ILQSTTILVTARSGALFNYQCGQVIPDGSMWSLLVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
QG S++I + I +G+ L+++ G++ W F + + GV ++ ++ V R+
Sbjct: 186 QGMSVLIFMSICSGFLPKLWEIGWGTNGTNGDWTKFSI-VGGVLLVILIFVDFVELAQRR 244
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY + S Y+P +N SG+ P + + +LA P++LA G
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAIPTLLAQ-FGDSR 298
Query: 309 WQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
V+ I N + W +Y + FF F + +I P E AD + + G IP
Sbjct: 299 KDWVRWI-NANLANSTSVWYIALYTVMIVFFCFFYT--EITFNPDETADNMKEYGGFIPG 355
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++ G AT YL+ + G + L +A T+L L +N G T++LII G
Sbjct: 356 IRAGSATSRYLSYVMNRLNTVGAVYLLFVALIPTVLIMSL-HLNMKLPFGGTTILIIAGV 414
Query: 426 IIELRRSYQA 435
++ R +A
Sbjct: 415 GLDTLRQAKA 424
>gi|385801224|ref|YP_005837627.1| preprotein translocase subunit SecY [Gardnerella vaginalis HMP9231]
gi|415703900|ref|ZP_11459651.1| preprotein translocase subunit SecY [Gardnerella vaginalis 284V]
gi|333393952|gb|AEF31870.1| preprotein translocase, SecY subunit [Gardnerella vaginalis
HMP9231]
gi|388051206|gb|EIK74231.1| preprotein translocase subunit SecY [Gardnerella vaginalis 284V]
Length = 446
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 206/430 (47%), Gaps = 26/430 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++F E+R ++ +I+I RIG FIP+PG D ++I S S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVIRACTAKLASSSENFIGLVNLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 136 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
IL++ + A ++ S+ ++V ++ G + W+ + I++ G G
Sbjct: 126 ILQSTTILVTARSGALFNYQCGQVIPDGSMWSLLVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
QG S++I + I +G+ L+++ G++ W F + + GV ++ ++ V R+
Sbjct: 186 QGMSVLIFMSICSGFLPKLWEIGWGTNGTNGDWTKFSI-VGGVLLVILIFVDFVELAQRR 244
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY + S Y+P +N SG+ P + + +LA P++LA G
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAIPTLLAQ-FGDSR 298
Query: 309 WQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
V+ I N + W +Y + FF F + +I P E AD + + G IP
Sbjct: 299 KDWVRWI-NANLANSTSVWYIALYTVMIVFFCFFYT--EITFNPDETADNMKEYGGFIPG 355
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++ G AT YL+ + G + L +A T+L L +N G T++LII G
Sbjct: 356 IRAGSATSRYLSYVMNRLNTVGAVYLLFVALIPTVLIMSL-HLNMKLPFGGTTILIIAGV 414
Query: 426 IIELRRSYQA 435
++ R +A
Sbjct: 415 GLDTLRQAKA 424
>gi|311115147|ref|YP_003986368.1| preprotein translocase subunit SecY [Gardnerella vaginalis ATCC
14019]
gi|415705924|ref|ZP_11461063.1| preprotein translocase subunit SecY [Gardnerella vaginalis 0288E]
gi|417557048|ref|ZP_12208100.1| preprotein translocase, SecY subunit [Gardnerella vaginalis 315-A]
gi|310946641|gb|ADP39345.1| preprotein translocase subunit SecY [Gardnerella vaginalis ATCC
14019]
gi|333601689|gb|EGL13129.1| preprotein translocase, SecY subunit [Gardnerella vaginalis 315-A]
gi|388055349|gb|EIK78262.1| preprotein translocase subunit SecY [Gardnerella vaginalis 0288E]
Length = 446
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 206/430 (47%), Gaps = 26/430 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++F E+R ++ +I+I RIG FIP+PG D ++I S S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVIRACTAKLASSSENFIGLVNLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 136 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
IL++ + A ++ S+ ++V ++ G + W+ + I++ G G
Sbjct: 126 ILQSTTILVTARSGALFNYQCGQVIPDGSMWSLLVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
QG S++I + I +G+ L+++ G++ W F + + GV ++ ++ V R+
Sbjct: 186 QGMSVLIFMSICSGFLPKLWEIGWGTNGTNGDWTKFSI-VGGVLLVILIFVDFVELAQRR 244
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY + S Y+P +N SG+ P + + +LA P++LA G
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAIPTLLAQ-FGDSR 298
Query: 309 WQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
V+ I N + W +Y + FF F + +I P E AD + + G IP
Sbjct: 299 KDWVRWI-NANLANSTSVWYIALYTVMIVFFCFFYT--EITFNPDETADNMKEYGGFIPG 355
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++ G AT YL+ + G + L +A T+L L +N G T++LII G
Sbjct: 356 IRAGSATSRYLSYVMNRLNTVGAVYLLFVALIPTVLIMSL-HLNMKLPFGGTTILIIAGV 414
Query: 426 IIELRRSYQA 435
++ R +A
Sbjct: 415 GLDTLRQAKA 424
>gi|421500294|ref|ZP_15947305.1| preprotein translocase, SecY subunit [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
gi|402268708|gb|EJU18074.1| preprotein translocase, SecY subunit [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
Length = 426
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 210/434 (48%), Gaps = 33/434 (7%)
Query: 17 NNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG- 74
N+ S K E+R R+ +T ++ +++RIG FIP PG D D L+ ++ D LG
Sbjct: 8 NSKLSSIMKVPELRDRILLTLLMFLVARIGTFIPAPGVD-----TDRLAAMTAQNDILGY 62
Query: 75 ----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
GA ++S F LGI P I ASI++ +L I+P + +++KEG G KI + ++
Sbjct: 63 INMFSGGAFTRVSIFALGIIPYINASIVVSLLAAIIPQIEEIQKEGEAGRNKITQWTRYL 122
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
++G A+++ V C L + + T L G + + W+ + IS G G G
Sbjct: 123 TIGIALVQGFGV-CMWLQSVGLVFEPGLLFFLTTIVTLTAGTVFLMWVGEQISVKGIGNG 181
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SL+I + +++ + + + + GS P +L + + M VV G RK+
Sbjct: 182 VSLLIFLNVISRGPANIVQTIQTMSGSKF-LIPVLLAVAAAGILTIMGIVVFQLGQRKIP 240
Query: 251 LQYY--GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ Y GF ++S YIP +N SG+ PV+ + L+ P+++ + + S +
Sbjct: 241 IHYVGKGFNSRGGMGQNS-------YIPLKLNSSGVMPVIFASVLMMIPTVMINAIPSKY 293
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNV 366
+K L+ + VY +YA + F+ F A + P+++AD L + G IP +
Sbjct: 294 --AIKTTLS--MMFNQQHPVYMIVYALVIIFFSFFYTAIVFDPEKVADNLKRGGGTIPGI 349
Query: 367 KPGKATIEYLTKIQASTRF-WGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
+PG T+EYL + TR WGG + LA S + + G T ++I+VG
Sbjct: 350 RPGVETVEYLEGV--VTRITWGGAIF--LAAISILPFAIFSALGLPVFFGGTGIIIVVGV 405
Query: 426 IIELRRSYQAYNVM 439
I+ + A+ VM
Sbjct: 406 AIDTVQQIDAHLVM 419
>gi|390954658|ref|YP_006418416.1| protein translocase subunit secY/sec61 alpha [Aequorivita
sublithincola DSM 14238]
gi|390420644|gb|AFL81401.1| protein translocase subunit secY/sec61 alpha [Aequorivita
sublithincola DSM 14238]
Length = 447
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 209/422 (49%), Gaps = 19/422 (4%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
E+R R+ +T ++++ R G + LPG D ++ Q F +G + L + GA
Sbjct: 14 EELRNRILLTLGMLLVYRFGAQVVLPGIDADMLAQFAGQFNAGGIGGLLNAFTGGAFANA 73
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA--- 139
S F LGI P I ASI++Q++ VP L +L+KEG G +KI W+++G +++A
Sbjct: 74 SVFALGIMPYISASIVVQLMQIAVPYLQKLQKEGESGRKKINQITRWLTIGICLVQAPSY 133
Query: 140 -VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+ +P + S + +LV G + W+ + I++ G G G S++I VG
Sbjct: 134 LAGLPAMGVPAEAFIMGQSFMFYFSSVIILVTGTIFAMWLGEKITDKGIGNGISILIMVG 193
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ ++ + + S +L L ++ ++ + ++++ RK+ +Q Y +
Sbjct: 194 IIARLPQSFAQEFVSRVMESNGGLIMILIELVIWFVIILLSIMLVMAVRKIPVQ-YARRT 252
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
AS E + I +IP +N SG+ P++ ++ PS +AS+ S Q ++ +
Sbjct: 253 ASGGYEKN-IFGARQFIPLKLNASGVMPIIFAQAIMFVPSAVASLSDSDMAQGIQATFSD 311
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIA-NLP-KEIADYLNKMGARIPNVKPGKATIEYL 376
W Y ++A + +F F A +P ++AD L + G IP +KPG T EYL
Sbjct: 312 IFGF----W-YNLVFAVLIIIFTYFYTAITVPTNKMADDLKRSGGFIPGIKPGSQTAEYL 366
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQ 434
KI + G + L+++A S + L I +G+++ G TS+LI+VG I+ +
Sbjct: 367 DKIMSQITLPGSVFLALIAISPAFVVK-LMGIQQGWALFYGGTSLLIMVGVAIDTMQQIN 425
Query: 435 AY 436
+Y
Sbjct: 426 SY 427
>gi|365966993|ref|YP_004948555.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|365745906|gb|AEW76811.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans ANH9381]
Length = 441
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 210/435 (48%), Gaps = 30/435 (6%)
Query: 26 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 259
G + + + Q + + +L L+ V + VT + V V G R++K++Y A
Sbjct: 195 AGLPAAVGQTIEQARLGQMHF--LVLLLIAVIVLAVTYFVVFVERGQRRIKVEY-----A 247
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 315
+ + ++P +N +G+ P + + ++ FP+ L +G + + +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSML 307
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
L+P +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 308 LHP-----GQP-LYLVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTS 361
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
Y+ KI GGL ++ + I+ N F G TS+LI+V I++
Sbjct: 362 RYIDKIMTRLTLIGGLYVTFVCLVPYIMTSAW---NVQFYFGGTSLLIVVVVIMDFIVQI 418
Query: 434 QAYNVMPSLSKALRR 448
Q++ + AL++
Sbjct: 419 QSHLMSTRYESALKK 433
>gi|313891550|ref|ZP_07825160.1| preprotein translocase, SecY subunit [Dialister microaerophilus
UPII 345-E]
gi|329121848|ref|ZP_08250463.1| preprotein translocase subunit SecY [Dialister micraerophilus DSM
19965]
gi|313120009|gb|EFR43191.1| preprotein translocase, SecY subunit [Dialister microaerophilus
UPII 345-E]
gi|327467786|gb|EGF13278.1| preprotein translocase subunit SecY [Dialister micraerophilus DSM
19965]
Length = 420
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 211/428 (49%), Gaps = 31/428 (7%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
A F E++ R+ T V+ VI R+G IP+PG D +I F SG++ D
Sbjct: 6 ANIFANKELKDRILFTFVMFVIFRLGVHIPVPGVDSSVIES---LFTSGNIFGFLDLFSG 62
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA K S F + I+P I +SI+MQ+L ++P+L + +K+G +G++KI+ + ++ A
Sbjct: 63 GALSKFSLFAMSITPYINSSIIMQLLTAVIPTLEEWQKDGQEGYKKIQKVTRYFTVVLAF 122
Query: 137 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++A +A Y+L + +S + +L G + WI + I+E G G G SLII
Sbjct: 123 IQAFGMA-YALRANNALLDNSWFFLFFIVIVLTAGTCLLVWIGEQITEKGIGNGISLIIF 181
Query: 197 VGILTGYTETLYKMLSQL-LGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
GI+ + E ++ L +G+ + ++G+ I+ + + V E R++ +QY
Sbjct: 182 CGIVARFPEAASTIVDYLKVGTITPLQALLFVVIGLAMILVV--IAVNEAQRRIPVQY-- 237
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 315
A ++P +N +G+ P++ + ++ P LA + H+ +
Sbjct: 238 ---AKRVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSIIMMPVTLAQFV------HINWV 288
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKMGARIPNVKPGKAT 372
+ T G W +Y +F+F F A N+ K++AD + K G IP ++PG+ T
Sbjct: 289 KSLATLFGWGTWPNTILYGILIFMFTYFYTAITVNV-KDLADNMKKYGGFIPGIRPGEPT 347
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSVLIIVGSIIELR 430
+ Y+ K+ G + L+ +A IL +++ I +G G T++LI+VG +E
Sbjct: 348 MMYIDKVLTRITLTGAIFLAFVA----ILPNFIGNITGIQGVYFGGTALLIVVGVALETM 403
Query: 431 RSYQAYNV 438
R Q+ V
Sbjct: 404 RQAQSLMV 411
>gi|261867274|ref|YP_003255196.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415771218|ref|ZP_11485253.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416108417|ref|ZP_11591050.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444346847|ref|ZP_21154806.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|261412606|gb|ACX81977.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348004337|gb|EGY44851.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348656386|gb|EGY74005.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|443541209|gb|ELT51669.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 441
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 210/435 (48%), Gaps = 30/435 (6%)
Query: 26 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 259
G + + + Q + + +L L+ V + VT + V V G R++K++Y A
Sbjct: 195 AGLPAAVGQTIEQARLGQMHF--LVLLLIAVIVLAVTYFVVFVERGHRRIKVEY-----A 247
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 315
+ + ++P +N +G+ P + + ++ FP+ L +G + + +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSML 307
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
L+P +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 308 LHP-----GQP-LYLVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTS 361
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
Y+ KI GGL ++ + I+ N F G TS+LI+V I++
Sbjct: 362 RYIDKIMTRLTLIGGLYVTFVCLVPYIMTSAW---NVQFYFGGTSLLIVVVVIMDFIVQI 418
Query: 434 QAYNVMPSLSKALRR 448
Q++ + AL++
Sbjct: 419 QSHLMSTRYESALKK 433
>gi|424824804|ref|ZP_18249791.1| putative preprotein translocase subunit SecY [Chlamydophila abortus
LLG]
gi|333409903|gb|EGK68890.1| putative preprotein translocase subunit SecY [Chlamydophila abortus
LLG]
Length = 457
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 222/456 (48%), Gaps = 39/456 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 76
+ F +E+R++LF T L+ RIG FIP+PG + + + S + +L D
Sbjct: 6 QIFSIAELRQKLFFTFALLAACRIGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +PS+ + +E D G KI ++G
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLLVFMPSIQREMRESPDQGKRKIGRLTRLFTVGL 125
Query: 135 AILEAVIVACY------SLPYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A + S+P + S K + T ++ G + + WI +
Sbjct: 126 ACIQSLLFAKFALKMNMSIPGIVLPTLLSSKLFGAPWIFYLTTVIVMTTGTLLLMWIGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 237
IS+ G G G SLII +GIL + L ++++L LGS S +L L +F V +
Sbjct: 186 ISDRGIGNGVSLIISLGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCLIFVFVLV 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
+++ EG RK+ +QY L +R + P Y+P +N +G+ PV+ + LL FP
Sbjct: 246 TTILIIEGVRKIPVQY---ALRVISRREIP--GGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 298 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIA 353
+ + + S + + V +L+P + WVY + Y + F F A P++IA
Sbjct: 301 ATIGQFMSSDSSWLKRVAMMLSPGS------WVYSSCYVLLIIFFTYFWTATQFHPEQIA 354
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGF 412
+ K A IP ++ GK T YL G + L+++A +IL L N +
Sbjct: 355 SEMKKNNAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVIAILPSILGRVLNVDANVSY 414
Query: 413 SIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+G T++LI+VG +++ + A+ +M L++
Sbjct: 415 FLGGTAMLIVVGVVLDTMKQVDAFLLMRRYDSFLKK 450
>gi|224091887|ref|XP_002309386.1| SecY protein [Populus trichocarpa]
gi|222855362|gb|EEE92909.1| SecY protein [Populus trichocarpa]
Length = 430
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 197/430 (45%), Gaps = 46/430 (10%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL----IPQDYL-----SFVSGSVDE 72
FFK + + +V+SR+G +IPL G +R + Q+ L SF G +
Sbjct: 13 DFFKGPLPGKFLKLLGFLVVSRLGIYIPLGGVNREAFAGNLDQNSLLSTLDSFSGGGIGR 72
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 131
LG F LGI P I A I+ Q+L I P L L+K EG G +KI Y + S
Sbjct: 73 LG---------IFSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKILQYTRYAS 123
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+GFAI++A+ Y P+ S + V+ + LL G++ ++I + IS+ G G+
Sbjct: 124 VGFAIVQAIGQVLYLRPF---VDDFSTQWVLTSVTLLTLGSVFTTYIGEQISDLKLGNGT 180
Query: 192 SLIICVGILT------GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
SL+I I++ G T +G + F L +LG+ V V E
Sbjct: 181 SLLIFTSIISYLPASFGQTAAQAIQDGNYVGLGTIIFSFFLLVLGI--------VYVQEA 232
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
RK+ L Y AS S + Y+PF +N SG+ P++ +T LA P LA G
Sbjct: 233 ERKIPLNY-----ASRYTSSSSGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG 287
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
+ LNP S + + AFF + + + P ++++ L + GA IP
Sbjct: 288 ISALKKAALTLNPGGSFYLPTNIL--LIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPL 343
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
V+PGK+T +L + + G L+ILA ++++ + + TSVLI+VG
Sbjct: 344 VRPGKSTAAFLKTVLSRISVLGSTFLAILAAGPSVIEQ-ISHLTAFRGFAGTSVLILVGC 402
Query: 426 IIELRRSYQA 435
+ R QA
Sbjct: 403 ATDTARKVQA 412
>gi|451817079|ref|YP_007453280.1| protein translocase subunit SecY [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451783058|gb|AGF54026.1| protein translocase subunit SecY [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 428
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 214/435 (49%), Gaps = 25/435 (5%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F E+R+++ T +L+ + R+G IPLPG I DYL +S S LG
Sbjct: 1 MLQTLRNAFKVPELRKKILWTILLVAVFRMGSHIPLPG-----INSDYLKNLSQSGGLLG 55
Query: 75 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
+ GA + S LG+ P I ASI++Q+L +P L QL KEG G +KI++ +
Sbjct: 56 FYDMLSGGAFSRSSILALGVMPYINASIIVQLLTVAIPQLEQLSKEGDTGRKKIQNATRY 115
Query: 130 ISLGFA-ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+S G + +L I A S + + K ++V F LV G W+ D ++ G G
Sbjct: 116 VSFGISFVLAYGIFATISSSGATGGLNFIQKGIIV--FALVVGTTFCMWLGDQLTVKGIG 173
Query: 189 QGSSLIICVGILTGYTETLYKMLS-QLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G+S++I V I++ T+ M++ + GS+ + + V + T+ ++E R
Sbjct: 174 NGTSILIFVNIISRVPMTIASMMTLKEAGSASIVEIVLFAVFVVLLLATILYFSLSE--R 231
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
+V +QY G AA S + +IP +I S + ++ + ++ FP +A + G
Sbjct: 232 RVPVQYAG---KFAAGNSSMVKSQSTHIPLSIIGSAVLAIIFSMSVMDFPKTIAQLFGGD 288
Query: 308 FWQHVKEIL-NPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
+ K IL NP + W+Y +YA FN F I P E+++ L+K +P
Sbjct: 289 -KEWAKWILTNPTCVFNQKSWMYLVLYAILTIFFNWFYTQITFKPDEMSENLHKSAGFVP 347
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
V+PG+ T + K+ F GG+L +ILA + ++ +Y N FS T +LI++
Sbjct: 348 GVRPGEETTIFFEKVLNRVSFIGGILAAILAVTPVLVQNYTEFQNISFS--GTGLLIVIN 405
Query: 425 SIIELRRSYQAYNVM 439
++ R ++ V+
Sbjct: 406 VALDFTRKVESQMVV 420
>gi|418425394|ref|ZP_12998486.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS1]
gi|387716957|gb|EIK04994.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS1]
Length = 430
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 219/430 (50%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K + +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQCSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>gi|78780017|ref|YP_398129.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9312]
gi|78713516|gb|ABB50693.1| protein translocase subunit secY/sec61 alpha [Prochlorococcus
marinus str. MIT 9312]
Length = 439
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 218/453 (48%), Gaps = 49/453 (10%)
Query: 6 FLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF 65
F+N R S ++ F E+R R+ T L+++ R+G +IP+PG DR + SF
Sbjct: 2 FVNKSRNPSASEILSQLFLNKELRSRVLTTLGLLLLVRLGIYIPMPGIDRV----AFKSF 57
Query: 66 VSGSVDELG-----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDG 119
+ +G G L F LGI P I ASI++Q+L +P L L+K EG G
Sbjct: 58 IDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIIIQLLTASLPVLEDLQKNEGEAG 117
Query: 120 HEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWIC 179
KI ++SLG+ L+++I + Y+I S + V+ T+ LV G+M + W
Sbjct: 118 RRKIAQITRYVSLGWGFLQSIIFSLILRQYAIQGISETT-FVLQTSIALVTGSMLVMWFS 176
Query: 180 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQ--------LLGSSVRWWPFMLGLLGV 231
+ I+E G GQG+SL+I + I++ + L + + +LG +V LLGV
Sbjct: 177 EIITEKGIGQGASLVIFLNIVSTLPKALSSTIEKAQTGDRGDVLGIAV--------LLGV 228
Query: 232 FTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVL 288
F + + + V EG R++ + SA R+ T + + Y+P +N G+ P++
Sbjct: 229 FLLTIVGIIFVQEGARRI-------PIVSAKRQIGNATLLPTRQSYLPLKLNAGGVMPII 281
Query: 289 TTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIA 346
+ L+ P +A++ G+PF + LNP +S PW Y + + F+ F +
Sbjct: 282 FASALIFLPITIANVTGNPFLIKIASSLNPGSS---NPWPYALTFFALILGFSFFYASLT 338
Query: 347 NLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR 406
P ++A L K G IP V+PG T YL+ IQ LL + S I+ +
Sbjct: 339 INPVDVASNLKKGGVAIPGVRPGSNTANYLSGIQNRLT----LLGGLFLGSVAIIPAAVE 394
Query: 407 R---INEGFSIGFTSVLIIVGSIIELRRSYQAY 436
R + +G TS+LI+VG I+ + Q Y
Sbjct: 395 RATNVQTFQGLGATSLLILVGVAIDTAKQIQTY 427
>gi|113476561|ref|YP_722622.1| preprotein translocase subunit SecY [Trichodesmium erythraeum
IMS101]
gi|110167609|gb|ABG52149.1| protein translocase subunit secY/sec61 alpha [Trichodesmium
erythraeum IMS101]
Length = 446
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 194/409 (47%), Gaps = 40/409 (9%)
Query: 49 PLPGFDR-----RLIPQ---DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQ 100
P+PG +R R+ Q +L SG G F A L F LGI P I ASI++Q
Sbjct: 45 PVPGINREAFQARIGDQALTGFLDLFSG-----GGFSA---LGIFALGIIPYINASIIIQ 96
Query: 101 VLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVK 159
++ +PSL L+K EG G KI +++LG+++L++ +A Y S+ V
Sbjct: 97 LMTAALPSLENLQKNEGEAGRRKISQITRYVALGWSVLQSFGLAIYLNSSSVDINGELVT 156
Query: 160 --------HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKML 211
+ T + G+M + WI + I+E G G G+SL+I V I+ ++L +
Sbjct: 157 VSINPGSLFIAKTILAITAGSMFVMWISELITERGIGNGASLLIFVNIVAVLPQSLGDTI 216
Query: 212 SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE--DSPIT 269
G + LL VF ++ + V V EG R++ + SA R+
Sbjct: 217 KLFEGGDRAIVGRAIILLLVFLVMIVGIVFVQEGSRRIPI-------LSARRQVGRKLYR 269
Query: 270 EVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVY 329
E + Y+P +N G+ P++ + +L P LA SP + ++P G PW+Y
Sbjct: 270 ETKSYLPLRLNQGGVMPIIFASAVLILPVSLAQFANSPIISQIATAISPS---GPTPWLY 326
Query: 330 YTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWG 387
Y + F+ F + P +++ L KMGA IP ++PGK T +Y+ K+ F G
Sbjct: 327 ALFYFVLILFFSYFYASLIMNPVDMSQNLKKMGASIPGIRPGKTTSDYIEKVLNRLTFLG 386
Query: 388 GLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ L ++A TI++ R+ +G TS+LI+VG I+ + Q Y
Sbjct: 387 AIFLGLVAIVPTIVESA-TRVPTFRGLGATSLLILVGVAIDTAKQIQTY 434
>gi|108804954|ref|YP_644891.1| protein translocase subunit secY/sec61 alpha [Rubrobacter
xylanophilus DSM 9941]
gi|108766197|gb|ABG05079.1| protein translocase subunit secY/sec61 alpha [Rubrobacter
xylanophilus DSM 9941]
Length = 428
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 214/451 (47%), Gaps = 43/451 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE-- 72
+L + A ++ E+R++LF TA ++ R G F+PLPG +R ++ +G +D+
Sbjct: 1 MLGSLANAWKIPELRQKLFFTAAMLAAYRAGAFVPLPGINREVL-------AAGGLDQNA 53
Query: 73 ----LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 126
G F GA LS F LGI P I A+I+MQ++ +P L +L +EG G +KI Y
Sbjct: 54 ITGLFGVFTGGAFNNLSVFALGIMPYITAAIVMQLMTVAIPRLQELAREGEVGQQKITQY 113
Query: 127 IWWISLGFAILEAVIVACY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+L + +++V + + S + A + + L G M W + I++
Sbjct: 114 TRVFTLALSFIQSVAMVLFLRSGQFGPVLAGAGALDLFLVVVTLTTGVMVTMWFGELITQ 173
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VT 243
G G G SLII IL+ + ++ GS + + +LG+ ++ + A+V V
Sbjct: 174 RGLGNGISLIITASILSQAPNAVRTLIED--GSVLT-----MVILGIIAVMIVAAIVFVN 226
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
EG R++ + Y ++ + Y+P +N +G+ P++ + LL FP ++
Sbjct: 227 EGQRRIPITYAKRQVGRRMSQGG-----TTYLPLKVNMAGVIPIIFASSLLIFPVVITQF 281
Query: 304 LG----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLN 357
S + + +I P ++ Y +YA + +F F A P E AD L
Sbjct: 282 AAGGDQSSWLFRLAQIFAPPSA------PYLILYALLIVMFTYFYTAVQFNPIEHADNLK 335
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++PG+ T YL + +G + L+++A ++ L N + +G T
Sbjct: 336 KSGGYIPGIRPGQPTALYLNSVLTRITLFGAVFLAVIAVLPYLITGALNLPNSIY-LGGT 394
Query: 418 SVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
S+LI+VG ++ R ++ +M + LRR
Sbjct: 395 SMLIVVGVSLDTVRQLESQLMMRNYEGFLRR 425
>gi|68249394|ref|YP_248506.1| preprotein translocase subunit SecY [Haemophilus influenzae
86-028NP]
gi|68057593|gb|AAX87846.1| preprotein translocase SecY subunit [Haemophilus influenzae
86-028NP]
Length = 441
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 207/435 (47%), Gaps = 28/435 (6%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDATVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 143 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 259
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 315
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
LNP +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTS 361
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
Y+ K+ GGL ++ + I+ + F G TS+LI+V I++
Sbjct: 362 RYIDKVMTRLTLIGGLYVTFVCLVPYIMTSAW---DVKFYFGGTSLLIVVVVIMDFIVQV 418
Query: 434 QAYNVMPSLSKALRR 448
Q++ + AL++
Sbjct: 419 QSHLMSSQYESALKK 433
>gi|16272739|ref|NP_438957.1| preprotein translocase subunit SecY [Haemophilus influenzae Rd
KW20]
gi|145630544|ref|ZP_01786324.1| preprotein translocase subunit SecY [Haemophilus influenzae R3021]
gi|145632156|ref|ZP_01787891.1| preprotein translocase subunit SecY [Haemophilus influenzae 3655]
gi|145634791|ref|ZP_01790499.1| preprotein translocase subunit SecY [Haemophilus influenzae PittAA]
gi|145638401|ref|ZP_01794011.1| preprotein translocase subunit SecY [Haemophilus influenzae PittII]
gi|148826558|ref|YP_001291311.1| preprotein translocase subunit SecY [Haemophilus influenzae PittEE]
gi|148827987|ref|YP_001292740.1| preprotein translocase subunit SecY [Haemophilus influenzae PittGG]
gi|229845848|ref|ZP_04465960.1| preprotein translocase subunit SecY [Haemophilus influenzae 7P49H1]
gi|260579889|ref|ZP_05847719.1| preprotein translocase, SecY subunit [Haemophilus influenzae RdAW]
gi|260581615|ref|ZP_05849412.1| preprotein translocase, SecY subunit [Haemophilus influenzae NT127]
gi|319775268|ref|YP_004137756.1| preprotein translocase subunit SecY [Haemophilus influenzae F3047]
gi|319897708|ref|YP_004135905.1| preprotein translocase secy subunit [Haemophilus influenzae F3031]
gi|378696998|ref|YP_005178956.1| preprotein translocase membrane subunit [Haemophilus influenzae
10810]
gi|386266475|ref|YP_005829967.1| Protein translocase subunit SecY [Haemophilus influenzae R2846]
gi|1173419|sp|P43804.1|SECY_HAEIN RecName: Full=Protein translocase subunit SecY
gi|1573808|gb|AAC22456.1| preprotein translocase SecY subunit (secY) [Haemophilus influenzae
Rd KW20]
gi|144983934|gb|EDJ91376.1| preprotein translocase subunit SecY [Haemophilus influenzae R3021]
gi|144987063|gb|EDJ93593.1| preprotein translocase subunit SecY [Haemophilus influenzae 3655]
gi|145267957|gb|EDK07953.1| preprotein translocase subunit SecY [Haemophilus influenzae PittAA]
gi|145272730|gb|EDK12637.1| preprotein translocase subunit SecY [Haemophilus influenzae PittII]
gi|148716718|gb|ABQ98928.1| preprotein translocase subunit SecY [Haemophilus influenzae PittEE]
gi|148719229|gb|ABR00357.1| preprotein translocase subunit SecY [Haemophilus influenzae PittGG]
gi|229810852|gb|EEP46569.1| preprotein translocase subunit SecY [Haemophilus influenzae 7P49H1]
gi|260093173|gb|EEW77106.1| preprotein translocase, SecY subunit [Haemophilus influenzae RdAW]
gi|260095208|gb|EEW79099.1| preprotein translocase, SecY subunit [Haemophilus influenzae NT127]
gi|301169516|emb|CBW29117.1| preprotein translocase membrane subunit [Haemophilus influenzae
10810]
gi|309751541|gb|ADO81525.1| Protein translocase subunit SecY [Haemophilus influenzae R2866]
gi|309973711|gb|ADO96912.1| Protein translocase subunit SecY [Haemophilus influenzae R2846]
gi|317433214|emb|CBY81589.1| preprotein translocase SecY subunit [Haemophilus influenzae F3031]
gi|317449859|emb|CBY86070.1| preprotein translocase SecY subunit [Haemophilus influenzae F3047]
Length = 441
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 207/435 (47%), Gaps = 28/435 (6%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 143 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 259
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 315
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
LNP +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTS 361
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
Y+ K+ GGL ++ + I+ + F G TS+LI+V I++
Sbjct: 362 RYIDKVMTRLTLIGGLYVTFVCLVPYIMTSAW---DVKFYFGGTSLLIVVVVIMDFIVQV 418
Query: 434 QAYNVMPSLSKALRR 448
Q++ + AL++
Sbjct: 419 QSHLMSSQYESALKK 433
>gi|229844665|ref|ZP_04464804.1| preprotein translocase subunit SecY [Haemophilus influenzae 6P18H1]
gi|229812379|gb|EEP48069.1| preprotein translocase subunit SecY [Haemophilus influenzae 6P18H1]
Length = 441
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 207/435 (47%), Gaps = 28/435 (6%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 143 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQIAERGIGNGISILVFGGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 259
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 315
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
LNP +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTS 361
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
Y+ K+ GGL ++ + I+ + F G TS+LI+V I++
Sbjct: 362 RYIDKVMTRLTLIGGLYVTFVCLVPYIMTSAW---DVKFYFGGTSLLIVVVVIMDFIVQV 418
Query: 434 QAYNVMPSLSKALRR 448
Q++ + AL++
Sbjct: 419 QSHLMSSQYESALKK 433
>gi|386394144|ref|ZP_10078925.1| preprotein translocase, SecY subunit [Desulfovibrio sp. U5L]
gi|385735022|gb|EIG55220.1| preprotein translocase, SecY subunit [Desulfovibrio sp. U5L]
Length = 437
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 205/422 (48%), Gaps = 29/422 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E++++L T +L+ + RIG +P+PG D + D+ ++ L D G LS
Sbjct: 14 ELKKKLLWTFLLVAVYRIGVHVPVPGVDSAAL-ADFFESAKNTLFGLFDMFSGGGLRNLS 72
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILEAVIV 142
F LGI P I ASI++Q+L + P L +++KE G G +KI Y + ++ A+++ +
Sbjct: 73 IFALGIMPYISASIIIQLLTVVSPELAKMQKEEGAAGRKKITQYTRYGTVLIAVIQGFGI 132
Query: 143 ACYSLPYSIYAASHSV-----KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
A + + V ++T L G + + W+ + ++E G G G S+II
Sbjct: 133 AVGLESMASPTGAPVVLMSGWAFRLMTIITLAAGTVFLMWLGEQMTEKGIGNGISMIIYA 192
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGF 256
GI+ G + + + + F+L L+G I ++A+V E G R++ +QY
Sbjct: 193 GIVAGLPRAVLSTIDLMKAGELSL--FVLILIGALMIAVLYAIVFMERGQRRIPIQY-AK 249
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
++ T ++P +N +G+ P + + +L FP+ L P+ + V
Sbjct: 250 RMVGRKMYGGQTT----HLPLRVNTAGVIPPIFASSILLFPATLGEFSHVPWLKSVASFF 305
Query: 317 NPETSVGARPWVYYTIYAFFVFLFN--IFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
+P+T V+ + FF + + IFD P +IA+ + K G IP ++PG T E
Sbjct: 306 SPQTM--TYNVVFVALIVFFCYFYTAIIFD----PADIAENIRKQGGFIPGIRPGAKTKE 359
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ K+ A WG L +S++ +L +++ N F G TS+LI+VG ++ +
Sbjct: 360 YIDKVLARITLWGSLYISVVCVLPMVL---IQQFNVPFYFGGTSLLIVVGVAMDFMSQIE 416
Query: 435 AY 436
+Y
Sbjct: 417 SY 418
>gi|76789247|ref|YP_328333.1| preprotein translocase subunit SecY [Chlamydia trachomatis
A/HAR-13]
gi|76167777|gb|AAX50785.1| SecY [Chlamydia trachomatis A/HAR-13]
Length = 457
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 225/457 (49%), Gaps = 41/457 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 76
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSGQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRLFTLVL 125
Query: 135 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A ++L P + A S+K + T +++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMITGTLLLMWVGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF----MLGLLGVFTIVTM 237
IS+ G G G SLII +GIL + L + ++L S F +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGILASFPSVLGSIFNKLNLGSQDPSEFGIVSLLILCAVFVFVLM 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
V++ EG RK+ +Q+ + RE + Y+P +N +G+ PV+ + LL FP
Sbjct: 246 ATVLIIEGMRKIPVQHA--RRIIGRRE---VVGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 298 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTI-YAFFVFLFNIFDIANL--PKEI 352
+ + L S + + + +L+P + V Y+I Y + F F A P++I
Sbjct: 301 ATIGQFLSSESSWLKRIATMLSPGS-------VAYSIFYVLLIIFFTYFWTATQFRPEQI 353
Query: 353 ADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEG 411
A + K GA IP ++ GK T YL G + L+++A +IL LR N
Sbjct: 354 ASEMKKNGAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVVAILPSILGRILRVDANVS 413
Query: 412 FSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+ +G T++LI+VG I++ + A+ ++ L++
Sbjct: 414 YFLGGTAMLIVVGVILDTMKQIDAFLLVRRYDGVLKK 450
>gi|124024014|ref|YP_001018321.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9303]
gi|123964300|gb|ABM79056.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9303]
Length = 439
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 202/418 (48%), Gaps = 21/418 (5%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
E+R R+ T L++ R+G +IP+PG DR Q +L + L F G L
Sbjct: 23 ELRGRVLTTLGLLLFIRLGIYIPMPGIDRVAF-QSFLQQGGQLIGFLDIFTGGGISTLGI 81
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+ ++++VI A
Sbjct: 82 FALGILPFINASIILQLLTAALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLVQSVIFA 141
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
Y++ S V V+ TA LV G+M + W+ + I++ G GQG+SL+I + I+
Sbjct: 142 LILRQYAVEGLSEVV-FVVQTALALVTGSMIVMWMSEIITDRGIGQGASLVIFLNIVATL 200
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 263
+ L + + ++ L+ VF + + + V EG R+ + SA R
Sbjct: 201 PKALASTIEKAQTGDRGDVVGIIVLVMVFLMTIVGIIFVQEGSRR-------LPIVSAKR 253
Query: 264 E---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
+ + + + Y+P +N G+ P++ + L+ P +A+ +P LNP
Sbjct: 254 QIGGTNLLPNRQSYLPLKLNAGGVMPIIFASALIFLPITIANFTKNPLLIRAASTLNPGA 313
Query: 321 SVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTK 378
A PW Y ++ + F+ F + P +IA L + G IP V+PG AT YL+
Sbjct: 314 ---ANPWPYALVFFALIVGFSYFYASLTINPIDIATNLKRGGVAIPGVRPGSATANYLSG 370
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+Q GGL L +A ++ + +G TS+LI+VG I+ + Q Y
Sbjct: 371 VQNRLTLLGGLFLGAVAIIPAAVERA-TNVQTFQGLGATSLLILVGVAIDTAKQVQTY 427
>gi|357635337|ref|ZP_09133215.1| preprotein translocase, SecY subunit [Desulfovibrio sp. FW1012B]
gi|357583891|gb|EHJ49224.1| preprotein translocase, SecY subunit [Desulfovibrio sp. FW1012B]
Length = 437
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 205/422 (48%), Gaps = 29/422 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E++R+L T +L+ + RIG +P+PG D + D+ ++ L D G LS
Sbjct: 14 ELKRKLLWTFLLVAVYRIGVHVPVPGVDSAAL-ADFFESAKNTLFGLFDMFSGGGLRNLS 72
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILEAVIV 142
F LGI P I ASI++Q+L + P L +++KE G G +KI Y + ++ A+++ +
Sbjct: 73 IFALGIMPYISASIIIQLLTVVSPELAKMQKEEGAAGRKKITQYTRYGTVLIAVIQGFGI 132
Query: 143 ACYSLPYSIYAASHSV-----KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
A + + V ++T L G + + W+ + ++E G G G S+II
Sbjct: 133 AVGLESMASPTGAPVVLMSGWAFRLMTIITLAAGTVFLMWLGEQMTEKGIGNGISMIIYA 192
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGF 256
GI+ G + + + + F+L L+G I ++A+V E G R++ +QY
Sbjct: 193 GIVAGLPRAVLSTIDLVKAGELSL--FVLLLIGALMIGVLYAIVFMERGQRRIPIQY-AK 249
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
++ T ++P +N +G+ P + + +L FP+ L P+ + V
Sbjct: 250 RMVGRKMYGGQTT----HLPLRVNTAGVIPPIFASSILLFPATLGEFSHVPWLKSVASFF 305
Query: 317 NPETSVGARPWVYYTIYAFFVFLFN--IFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
+P+T V+ + FF + + IFD P +IA+ + K G IP ++PG T E
Sbjct: 306 SPQTM--TYNVVFVALIVFFCYFYTAIIFD----PADIAENIRKQGGFIPGIRPGAKTKE 359
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ K+ A WG L +S++ +L +++ N F G TS+LI+VG ++ +
Sbjct: 360 YIDKVLARITLWGSLYISVVCVLPMVL---IQQFNVPFYFGGTSLLIVVGVAMDFMSQIE 416
Query: 435 AY 436
+Y
Sbjct: 417 SY 418
>gi|325577147|ref|ZP_08147631.1| preprotein translocase subunit SecY [Haemophilus parainfluenzae
ATCC 33392]
gi|345429289|ref|YP_004822407.1| preprotein translocase membrane subunit [Haemophilus parainfluenzae
T3T1]
gi|419802889|ref|ZP_14328069.1| preprotein translocase, SecY subunit [Haemophilus parainfluenzae
HK262]
gi|419845516|ref|ZP_14368783.1| preprotein translocase, SecY subunit [Haemophilus parainfluenzae
HK2019]
gi|301155350|emb|CBW14816.1| preprotein translocase membrane subunit [Haemophilus parainfluenzae
T3T1]
gi|325160729|gb|EGC72850.1| preprotein translocase subunit SecY [Haemophilus parainfluenzae
ATCC 33392]
gi|385189129|gb|EIF36598.1| preprotein translocase, SecY subunit [Haemophilus parainfluenzae
HK262]
gi|386415384|gb|EIJ29916.1| preprotein translocase, SecY subunit [Haemophilus parainfluenzae
HK2019]
Length = 441
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 208/436 (47%), Gaps = 34/436 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
E++ RL +++ RIG FIPLPG D ++ Q +D L F GA + S
Sbjct: 18 ELKSRLLFVLGALIVYRIGSFIPLPGIDAAVLAQLVEQQKGTIIDMLNMFSGGALSRASI 77
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
LGI P I ASI+MQ+L + P+L +L+KEG G KI Y + ++ FA ++A+ ++
Sbjct: 78 LALGIMPYISASIVMQLLATVSPALAELKKEGAAGQRKITKYTRYATVVFATIQAIAIST 137
Query: 145 YSLPYSIYAASHSVKHVMVTAFL-----LVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
LP + V ++ T + LV G M + W+ + I+E G G G S+++ GI
Sbjct: 138 -GLPNML---PQLVPNIGFTFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGI 193
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKL 258
+ G + + + Q + P +L L+ VT + V V G R+++++Y
Sbjct: 194 VAGLPHAIIETVEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY----- 246
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKE 314
A + + ++P +N + + P + + ++ FP+ L G + +
Sbjct: 247 AKRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNDLSM 306
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKAT 372
+LNP +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 307 LLNP-----GQP-LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQT 360
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
Y+ K+ GGL ++ + I+ + F G TS+LI+V I++
Sbjct: 361 SRYIDKVMTRLTLIGGLYVTFVCLVPYIMTSAW---DVKFYFGGTSLLIVVVVIMDFIVQ 417
Query: 433 YQAYNVMPSLSKALRR 448
Q++ + AL++
Sbjct: 418 VQSHLMSSQYESALKK 433
>gi|417845085|ref|ZP_12491118.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21639]
gi|341955977|gb|EGT82422.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21639]
Length = 441
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 207/435 (47%), Gaps = 28/435 (6%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 143 ACYSLPYSIYAASHSVKHV--MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLPGLVPNVGFAFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 259
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 315
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
LNP +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTS 361
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
Y+ K+ GGL ++ + I+ + F G TS+LI+V I++
Sbjct: 362 RYIDKVMTRLTLIGGLYVTFVCLVPYIMTSAW---DVKFYFGGTSLLIVVVVIMDFIVQV 418
Query: 434 QAYNVMPSLSKALRR 448
Q++ + AL++
Sbjct: 419 QSHLMSSQYESALKK 433
>gi|117927535|ref|YP_872086.1| preprotein translocase subunit SecY [Acidothermus cellulolyticus
11B]
gi|117647998|gb|ABK52100.1| protein translocase subunit secY/sec61 alpha [Acidothermus
cellulolyticus 11B]
Length = 437
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 208/433 (48%), Gaps = 32/433 (7%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP---QDYLSFVSGSVDELGDF- 76
++F ++R++L +IV+ RIG IP PG + I Q +G++ L +
Sbjct: 7 QAFRTPDLRKKLLFVLFIIVLFRIGSAIPTPGVSSKNINTCLQQIPQGGAGNIYTLINLF 66
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA LKLS LGI P I +SI++Q+L ++P L +L++EG G +K+ Y ++++G
Sbjct: 67 SGGALLKLSILALGIMPYITSSIIIQLLVVVIPRLERLKEEGASGQQKLTQYTRYLTIGL 126
Query: 135 AILE-AVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
A+L+ A VA P ++++ + S+ ++ ++ G + W+ + I++ G
Sbjct: 127 AVLQSAAFVALARTPGAVFSGCSLPIIPNTSLGVIVTMVIIMTAGTGIIMWLGELITDRG 186
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G SL+I V I + L ++ + P +G+L V + V + +G
Sbjct: 187 IGNGMSLLIFVQIAARFPAELNQIRLN------KGLPTFIGVLVVGVAIITAIVFMEQGQ 240
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG- 305
R++ +QY + + YIP +N +G+ PV+ + LL PS+ + G
Sbjct: 241 RRIPVQYAKRMVGRRMYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPSLAIQVWGP 295
Query: 306 ---SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGAR 362
F V L+P T+ Y+ + FF F + I P EIAD + K G
Sbjct: 296 TKHPAFANFVNTYLSPSTAHPTYLLAYFVLIIFFTFFY--VAITFNPDEIADNMKKYGGF 353
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++PG+ T EYL+ + + G L+ +A L + + F G T+VLI+
Sbjct: 354 IPGIRPGRPTAEYLSYVLSRITVPGATYLAFIAVLPE-LALSIVGSAQAFPFGGTTVLIL 412
Query: 423 VGSIIELRRSYQA 435
VG +++ + ++
Sbjct: 413 VGVGLDMVKQIES 425
>gi|431792489|ref|YP_007219394.1| protein translocase subunit SecY [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430782715|gb|AGA67998.1| protein translocase subunit secY/sec61 alpha [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 429
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 218/441 (49%), Gaps = 58/441 (13%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFVSGSVDELGDFGA 78
E+R+++ T ++ ++ RIG IP+P + ++ Q D+L SG G+
Sbjct: 14 ELRKKIGFTLMMFLVFRIGAHIPIPYINHDVLSQMLGTGTLYDFLDTFSG--------GS 65
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY----------IW 128
+ S F L I+P I ASI++Q+L ++P L +L KEG G +KI Y +
Sbjct: 66 FRRFSVFALSITPYITASIILQLLTIVIPYLERLAKEGEYGRKKITQYTRYGTVILGFVQ 125
Query: 129 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+ F + A+++ + ++IY ++ A +L G + W+ + I+E+G G
Sbjct: 126 GFGMTFGLRGALVIPQPGMEWAIY---------LLVALILTAGTAFLMWLGERITENGIG 176
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
G SLII GI+ G + + K ++ LL +LGL+ + + V + EG R+
Sbjct: 177 NGISLIIFAGIVAGVPDAI-KYIAGLLKVGEINALSVLGLVVIGAAIIAGVVFIQEGQRR 235
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GS 306
+++QY A +IP +N +G+ P++ LLAFPS +A+ + S
Sbjct: 236 IQVQY-----AKRVVGRRTYGGQSSHIPMKVNQAGVIPIIFAISLLAFPSTIATWMPATS 290
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
+ Q V + S+ + P+++ YA + F F ++ P ++AD L K G IP
Sbjct: 291 GYVQFVNKWFVMNGSLTSIPYLF--TYAVLIIFFTYFYTAVSFNPVDVADNLKKYGGFIP 348
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG+AT +YLTKI + GG L+++A +++ L I + S+G TS+LI+V
Sbjct: 349 GLRPGRATADYLTKILSRLTLAGGTFLALIAVLPSLIIG-LTGI-QNISLGGTSLLIVVS 406
Query: 425 SIIE---------LRRSYQAY 436
+E ++R YQ +
Sbjct: 407 VALETMKQLESMLMQRHYQGF 427
>gi|282911790|ref|ZP_06319586.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282323486|gb|EFB53802.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus WBG10049]
Length = 430
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 219/430 (50%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+ ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVCNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>gi|303276823|ref|XP_003057705.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226460362|gb|EEH57656.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 423
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 205/419 (48%), Gaps = 29/419 (6%)
Query: 38 LIVISRIGYFIPLPGFDRRLIPQDYLSFVS--GSVDELGDFGAELKLSFFQLGISPQIVA 95
L+V+SRIG +IP+ G DR + G VD L G+ KL F LGI P I +
Sbjct: 15 LLVVSRIGTYIPISGVDRAAFAESLAGGGGMLGYVDTLTG-GSISKLGIFSLGIVPFINS 73
Query: 96 SILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAA 154
SI+ Q+L + PSL +L+KE G G K Y + +L FA+++AV Y PY
Sbjct: 74 SIIFQLLTSVFPSLSKLQKEEGEAGRRKFMQYQRYGALAFAVVQAVGQCLYVRPY---VE 130
Query: 155 SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQL 214
S+ ++ ++ +L GAM + +I + ++E G G+SL+I I++ + + LS+
Sbjct: 131 DFSLGWLVESSAVLTAGAMILLYIGEVLNELKLGNGTSLLIFTNIVSSLPSSFGQTLSEA 190
Query: 215 --LGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG-FKLASAAREDSPITEV 271
G + F G F + T+ V V E RK+ + Y F+ A+
Sbjct: 191 GEKGDNAVLPVF----FGAFFLSTLGIVYVQEAERKIPMNYSTRFQAGGLAKSS------ 240
Query: 272 EPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYT 331
Y+PF +N +G+ P++ + LLA P+ +A +P + + P + A V
Sbjct: 241 --YLPFKVNSAGVMPIIFASSLLALPATIARFAPNPVIIGAAKAVYPGGA--AYVPVNIA 296
Query: 332 IYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLL 391
+ FF + + + PK++A+ L + GA IP V+PG T +Y+T++ ++ G + L
Sbjct: 297 LICFFNYFYTFLQLE--PKDVAEQLKRQGASIPGVRPGATTRDYITRVLSNLSLLGSVFL 354
Query: 392 SILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRY 449
+LA + T ++ GF+ TS+LI+VG + R ++ VM +L +
Sbjct: 355 GVLALTPTAVEGITGLTTFRGFA--GTSLLILVGVATDTTRKVRSELVMQKYDTSLDDF 411
>gi|340755353|ref|ZP_08692043.1| preprotein translocase, SecY subunit [Fusobacterium sp. D12]
gi|419841112|ref|ZP_14364490.1| preprotein translocase, SecY subunit [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
gi|340573497|gb|EFS24015.2| preprotein translocase, SecY subunit [Fusobacterium sp. D12]
gi|386906131|gb|EIJ70876.1| preprotein translocase, SecY subunit [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
Length = 426
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 209/434 (48%), Gaps = 33/434 (7%)
Query: 17 NNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG- 74
N+ S K E+R R+ T ++ +++RIG FIP PG D D L+ ++ D LG
Sbjct: 8 NSKLSSIMKVPELRDRILFTLLMFLVARIGTFIPAPGVD-----TDRLAAMTAQNDILGY 62
Query: 75 ----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
GA ++S F LGI P I ASI++ +L I+P + +++KEG G KI + ++
Sbjct: 63 INMFSGGAFTRVSIFALGIIPYINASIVVSLLAAIIPQIEEIQKEGEAGRNKITQWTRYL 122
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
++G A+++ V C L + + T L G + + W+ + IS G G G
Sbjct: 123 TIGIALVQGFGV-CMWLQSVGLVFEPGLLFFLTTIVTLTAGTVFLMWVGEQISVKGIGNG 181
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SL+I + +++ + + + + GS P +L + + M VV G RK+
Sbjct: 182 VSLLIFLNVISRGPANIVQTIQTMSGSKF-LIPVLLAVAAAGILTIMGIVVFQLGQRKIP 240
Query: 251 LQYY--GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ Y GF ++S YIP +N SG+ PV+ + L+ P+++ + + S +
Sbjct: 241 IHYVGKGFNSRGGMGQNS-------YIPLKLNSSGVMPVIFASVLMMIPTVMINAIPSKY 293
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNV 366
+K L+ + VY +YA + F+ F A + P+++AD L + G IP +
Sbjct: 294 --AIKTTLS--MMFNQQHPVYMIVYALVIIFFSFFYTAIVFDPEKVADNLKRGGGTIPGI 349
Query: 367 KPGKATIEYLTKIQASTRF-WGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
+PG T+EYL + TR WGG + LA S + + G T ++I+VG
Sbjct: 350 RPGVETVEYLEGV--VTRITWGGAIF--LAAISILPFAIFSALGLPVFFGGTGIIIVVGV 405
Query: 426 IIELRRSYQAYNVM 439
I+ + A+ VM
Sbjct: 406 AIDTVQQIDAHLVM 419
>gi|158319563|ref|YP_001512070.1| preprotein translocase subunit SecY [Alkaliphilus oremlandii
OhILAs]
gi|158139762|gb|ABW18074.1| preprotein translocase, SecY subunit [Alkaliphilus oremlandii
OhILAs]
Length = 424
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 205/430 (47%), Gaps = 43/430 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFVSGSVDELGDFGA 78
++RR++ T +++ I R+G IP+PG D + + VSG G FG
Sbjct: 13 DLRRKILYTFMMLAIFRLGSVIPVPGVDINYVKSIVNNAGLLSFFDLVSG-----GAFG- 66
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++ F L ISP I +SI+MQ+L +PSL L KEG +G +KI Y + ++ A+++
Sbjct: 67 --NMTIFALSISPYITSSIIMQLLTIAIPSLEALAKEGEEGSKKIAQYQRYATIILALIQ 124
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A ++ ++ + ++V L G + W+ + I+E G G G SL+I G
Sbjct: 125 ATGISVGLFRGALI--NQDTFSIIVVILTLTAGTAFLMWLGEQITEKGIGNGISLLIFAG 182
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY---- 253
I+ +L+ + L + + P + L V I + AVV E G RK+ +QY
Sbjct: 183 IIASLPSSLFTTFA--LTKAGQINPLAIILFIVIAIAMIVAVVAIEAGTRKIPVQYAKRV 240
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP--FWQH 311
G K+ +IP +N SG+ PV+ LL FP +A +GS F +
Sbjct: 241 VGRKMYGGQSS---------HIPLKVNQSGVMPVIFAMSLLQFPHTIAYFIGSEGGFAKF 291
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPG 369
+ L+P G ++Y + A + F F I P EI++ + + G IP ++PG
Sbjct: 292 LNTWLSPTGMPGV--FIYNLLSAVLIIFFTYFYTAITFNPVEISNNMKQNGGFIPGIRPG 349
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
K T +Y+ KI G + L+I+ TI+ L + S G T+++IIVG +E
Sbjct: 350 KPTADYINKILTRITLSGAVFLAIITIVPTIV---LGITHIPISFGGTTIIIIVGVALET 406
Query: 430 RRSYQAYNVM 439
+ +A +M
Sbjct: 407 MKQIEAQLLM 416
>gi|166368466|ref|YP_001660739.1| preprotein translocase subunit SecY [Microcystis aeruginosa
NIES-843]
gi|425465075|ref|ZP_18844385.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9809]
gi|166090839|dbj|BAG05547.1| preprotein translocase SecY subunit [Microcystis aeruginosa
NIES-843]
gi|389832727|emb|CCI23379.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9809]
Length = 439
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 131/433 (30%), Positives = 215/433 (49%), Gaps = 29/433 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL VT L+++ R G F+P+PG DR + + + + +L
Sbjct: 10 TAQETFMQMAQAAGLRGRLLVTLGLLILLRFGMFVPIPGLDRARLAEIIQGNAALGILDL 69
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 132
G L F LGI P I ASI++Q+L +PSL L+K EG G KI +I+
Sbjct: 70 FTGGGLSTLGIFALGILPYINASIIVQLLTAALPSLEDLQKNEGEAGRRKIAQITRYIAF 129
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
G+AI++++ + L + + ++ + T LV G+M + WI + I+E G G G+S
Sbjct: 130 GWAIIQSIGI-TLGLLVANGVVAGTLPSIAATVLALVAGSMFVMWISELITERGLGNGAS 188
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
L+I V I+ +TL ++ + ++ LL VF ++ + V V EG R++
Sbjct: 189 LLIFVNIVAVLPKTLGDTITFAQQGGRQAIAQVVILLLVFLVMIIGIVFVQEGTRRI--- 245
Query: 253 YYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPF 308
+ SA R+ E Y+P +N G+ P++ + +L P L L +P
Sbjct: 246 ----PIVSARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLVLPFQLVQALPTDNPV 301
Query: 309 WQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGARI 363
Q + +++N RP W Y Y+ + F+ F I N PK+++ L KMGA I
Sbjct: 302 GQVLVQLVN-----ALRPDSWGYVAFYSLLILGFSFFYASLIVN-PKDMSQNLKKMGASI 355
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PG AT YL + G L LS++AT T+++ + +G TS+LI+V
Sbjct: 356 PGIRPGTATTNYLEGVLNRLTLLGALFLSLVATVPTVVESA-TGVTTFRGLGATSLLILV 414
Query: 424 GSIIELRRSYQAY 436
G I+ + Q Y
Sbjct: 415 GVAIDTAKQIQTY 427
>gi|374374201|ref|ZP_09631860.1| protein translocase subunit secY/sec61 alpha [Niabella soli DSM
19437]
gi|373233643|gb|EHP53437.1| protein translocase subunit secY/sec61 alpha [Niabella soli DSM
19437]
Length = 445
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 205/423 (48%), Gaps = 46/423 (10%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
E+R ++ T VL + R+G I LPG + + Q + SG +D + F GA + S
Sbjct: 15 DELRSKILFTLVLTAVYRVGAHIVLPGINPVALEQYSKANQSGILDLINTFAGGAFNQAS 74
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI +Q++ +VPS +++KEG G KI ++++ +++A
Sbjct: 75 IFALGIMPYITASIFIQLMTVLVPSFQKMQKEGESGRNKINQITRYLTVAVTLVQAFAYI 134
Query: 144 CY---SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
Y + +I S + T +L G + + W+ + I++ G G G+SLII VGIL
Sbjct: 135 AYLHQTAGPAIMPGYGSFNFTLTTVVVLTAGTLFVMWLGEKITDKGLGNGTSLIIMVGIL 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGCRKVKLQY----Y 254
+ + L+ SVR ++ + + ++ + M +++ +G RKV + Y
Sbjct: 195 ARLPQAFTQELAV---RSVRTGDILIFIIEIALYIAINMGCIILVQGTRKVPVNYAKQIV 251
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA-----SILGSPFW 309
G + AR+ ++P +N +G+ P++ ++ P++ + LG F
Sbjct: 252 GNRQFGGARQ---------FLPLKVNAAGVMPIIFAQAIIFVPTLFTMGSKNATLGRMFT 302
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFFVFLFN--IFDIANLPKEIADYLNKMGARIPNVK 367
H G VY + F FL+ IF+ PK+I+D L + IP VK
Sbjct: 303 DHTN---------GWYMLVYAAVVIGFTFLYTALIFN----PKQISDNLKQNNGFIPGVK 349
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGS 425
PG+ T +Y+ I F G +LL+++ I+ L + +GF++ G TS+LI+VG
Sbjct: 350 PGQPTTDYIGTIMDRITFPGAVLLALVGILPGIIQK-LFGMTQGFAMFFGGTSLLIMVGV 408
Query: 426 IIE 428
I++
Sbjct: 409 ILD 411
>gi|113954766|ref|YP_729649.1| preprotein translocase subunit SecY [Synechococcus sp. CC9311]
gi|113882117|gb|ABI47075.1| preprotein translocase, SecY subunit [Synechococcus sp. CC9311]
Length = 439
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 203/426 (47%), Gaps = 37/426 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ---------DYLS-FVSGSVDELGDF 76
E+R R+ T L+++ R+G +IP+PG DR Q +L F G + LG
Sbjct: 23 ELRGRVLTTLGLLMLVRLGIYIPMPGIDRVAFEQFIEQGGTLIGFLDIFTGGGISTLG-- 80
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 135
F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+
Sbjct: 81 -------VFALGILPFINASIIIQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWG 133
Query: 136 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+++VI A Y++ S V V TA LV G+M + W+ + I+E G GQG+SL+I
Sbjct: 134 TIQSVIFAMILRQYAVEGLSDVV-FVFQTALALVTGSMIVMWLSEVITERGIGQGASLVI 192
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
+ I+ + L + + ++ L+ VF I + + V EG R+
Sbjct: 193 FLNIVATLPKALGSTIEKAQTGDRGDVVGIIILVLVFLITIVGIIFVQEGARR------- 245
Query: 256 FKLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
+ SA R+ + + + Y+P +N G+ P++ + L+ P +A++ +P
Sbjct: 246 LPIVSAKRQVGGTALLPSRQSYLPLKLNAGGVMPIIFASALIFLPITIANVTNNPILIRA 305
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGK 370
LNP A PW Y ++ + F+ F ++ P ++A L + G IP V+PG
Sbjct: 306 ASALNPSA---ANPWPYAILFFSLILGFSYFYSSLSLNPSDMATNLKRGGVAIPGVRPGS 362
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
AT YL ++ GGL L +A + ++ + +G TS+LI+VG I+
Sbjct: 363 ATAAYLEGVKNRLTLLGGLFLGAVAIIPSAVERA-TGVTTFQGLGATSLLILVGVAIDTA 421
Query: 431 RSYQAY 436
+ Q Y
Sbjct: 422 KQVQTY 427
>gi|86605848|ref|YP_474611.1| preprotein translocase subunit SecY [Synechococcus sp. JA-3-3Ab]
gi|86554390|gb|ABC99348.1| preprotein translocase, SecY subunit [Synechococcus sp. JA-3-3Ab]
Length = 432
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 192/402 (47%), Gaps = 36/402 (8%)
Query: 47 FIPLPGFDR-RLIPQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHI 105
+IP+P DR R + S V G +D G L F LGI P I ASI+MQ+L
Sbjct: 43 YIPIPSIDRARFAAEAANSPVFGFLDVFSGGGIS-ALGIFALGILPFINASIIMQLLVSA 101
Query: 106 VPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVT 164
+P+L L+K EG G +I Y +++L +AI++ + ++ + ++ S+ + V T
Sbjct: 102 IPALENLQKNEGEQGRRQISQYTRYVTLIWAIIQGIGISFWVREFA--NTSNELAFVAST 159
Query: 165 AFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT------GYTETLYKMLSQLLGSS 218
L G+M + W+ + I+E G G G SL+I V I+ G T +L + S +G
Sbjct: 160 TLALTAGSMFVMWLGEMITEKGVGSGPSLLIFVNIVATLPRALGQTISLARADSSTIGG- 218
Query: 219 VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE--DSPITEVEPYIP 276
+L L+ VF + V V EG RK+ + Y A R+ + E + Y+P
Sbjct: 219 ------ILVLMAVFLATIVGIVFVQEGSRKIPIVY-------AKRQVGNKLFREQKSYLP 265
Query: 277 FNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFF 336
+N G+ P++ +++ P LA + V +L P + W Y Y
Sbjct: 266 LRLNQGGVMPIIFAYSVMSLPFALAQYTQNLTLVQVANLLAPTS------WFYIPFYFVL 319
Query: 337 VFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSIL 394
+ LF+ F + + P ++A L KMGA IP V+PGKAT EY+ I G L L +
Sbjct: 320 ILLFSYFYASLIINPVDLAQNLKKMGASIPGVRPGKATAEYIEGILNRLTLLGALFLCAV 379
Query: 395 ATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
A T ++ I +G TS+LI+VG IE + Q Y
Sbjct: 380 AIIPTTVERA-TGITTFQGLGATSLLILVGVAIETSKQIQTY 420
>gi|124026690|ref|YP_001015805.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
NATL1A]
gi|123961758|gb|ABM76541.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
NATL1A]
Length = 439
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 204/422 (48%), Gaps = 21/422 (4%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFG 77
F E+R R+F T L++I R+G +IP+PG DR + + +F+ +G G
Sbjct: 19 FSNEELRGRVFTTLGLLLIVRLGIYIPMPGIDR----EAFKNFIDQGGQLIGFLDIFTGG 74
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAI 136
L F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+ +
Sbjct: 75 GISTLGVFALGILPFINASIIIQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWGL 134
Query: 137 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
+++ + A Y+I S S + V+ T+ LV G+M + W+ + I+E G GQG+SL+I
Sbjct: 135 VQSTVFALILRQYAIEGISES-EFVIQTSLALVTGSMIVMWLSEIITEKGIGQGASLVIF 193
Query: 197 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
+ I+ + L + + ++ LL VF I + + V EG R++ +
Sbjct: 194 LNIVATLPKALSSTIEKAQTGDRADVLGIIILLIVFLITIVGIIFVQEGARRIPIVSAKS 253
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
++ A S + Y+P +N G+ P++ + L+ P +A+ +P L
Sbjct: 254 QMGGGALLPSR----QSYLPLKLNAGGVMPIIFASALIFLPITIANFTQNPLLIKAASSL 309
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIE 374
NP +S PW Y + + F F + P +IA L K G IP V+PG AT
Sbjct: 310 NPGSS---NPWPYAITFFALILGFAYFYASLTINPLDIASNLKKGGVAIPGVRPGGATSN 366
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
YL+ +Q GGL L +A ++ + +G TS+LI+VG I+ + Q
Sbjct: 367 YLSGVQNRLTLLGGLFLGSVAIVPAAVERA-TNVQTFQGLGATSLLILVGVAIDTSKQIQ 425
Query: 435 AY 436
Y
Sbjct: 426 TY 427
>gi|342903394|ref|ZP_08725205.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21621]
gi|373467816|ref|ZP_09559105.1| preprotein translocase, SecY subunit [Haemophilus sp. oral taxon
851 str. F0397]
gi|417838901|ref|ZP_12485121.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M19107]
gi|417842269|ref|ZP_12488363.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M19501]
gi|417843935|ref|ZP_12490000.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21127]
gi|419838862|ref|ZP_14362282.1| preprotein translocase, SecY subunit [Haemophilus haemolyticus
HK386]
gi|341947484|gb|EGT74133.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M19501]
gi|341948398|gb|EGT75028.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21127]
gi|341955498|gb|EGT81954.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21621]
gi|341956055|gb|EGT82495.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M19107]
gi|371757474|gb|EHO46263.1| preprotein translocase, SecY subunit [Haemophilus sp. oral taxon
851 str. F0397]
gi|386910090|gb|EIJ74752.1| preprotein translocase, SecY subunit [Haemophilus haemolyticus
HK386]
Length = 441
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 207/435 (47%), Gaps = 28/435 (6%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 143 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLPGLVPNVGFGFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 259
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 315
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
LNP +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTS 361
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
Y+ K+ GGL ++ + I+ + F G TS+LI+V I++
Sbjct: 362 RYIDKVMTRLTLIGGLYVTFVCLVPYIMTSAW---DVKFYFGGTSLLIVVVVIMDFIVQV 418
Query: 434 QAYNVMPSLSKALRR 448
Q++ + AL++
Sbjct: 419 QSHLMSSQYESALKK 433
>gi|225076415|ref|ZP_03719614.1| hypothetical protein NEIFLAOT_01460 [Neisseria flavescens
NRL30031/H210]
gi|224952263|gb|EEG33472.1| hypothetical protein NEIFLAOT_01460 [Neisseria flavescens
NRL30031/H210]
Length = 437
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 208/431 (48%), Gaps = 26/431 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
++++RL +V+ RIG IP+PG D + + Y +G L F G+ + S
Sbjct: 15 DLKKRLVFLLGALVVFRIGAHIPVPGVDAVALAKLYEGAANGIFGMLNMFSGGSLERFSI 74
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
F +GI P I ASI++Q+ IVPSL L+KEG G + I Y + ++ A+L++ VA
Sbjct: 75 FAIGIMPYISASIIVQLASEIVPSLKALKKEGEAGRKIITKYTRYGTVLLAVLQSFGVAT 134
Query: 145 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 204
+ + S S++ + T LV G M + W+ + I+E G G G SLII GI++G
Sbjct: 135 FVYQQGVVVTS-SLEFHISTVVCLVTGTMFLMWLGEQITERGIGNGISLIITAGIVSGIP 193
Query: 205 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAAR 263
+ +ML+ S+ + ++G+ ++ +AVV E RKV + Y + S
Sbjct: 194 SGIVRMLTLTEQGSMSMLMAVSIVIGILLLI--YAVVYFESAQRKVPVHYAKRQFGSGMM 251
Query: 264 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEILNPE 319
I ++PF +N +G+ P + + ++ FPS L GS F V +L
Sbjct: 252 PGQSI-----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSNSTNSFLHKVAAMLQHG 306
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLT 377
S +Y ++A + F F A + PKE+A+ L K GA +P ++PG+ T YL
Sbjct: 307 QS------LYIILFATTIIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQTSRYLE 360
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYN 437
K+ +G L ++ + L L+ F +G TS+LI+V ++ R +Y
Sbjct: 361 KVVLRLTLFGALYITTICLIPEFLTTALK---VPFYLGGTSLLILVVVTMDFRTQINSYR 417
Query: 438 VMPSLSKALRR 448
+ + R
Sbjct: 418 MSSQYEDLMSR 428
>gi|306821600|ref|ZP_07455198.1| preprotein translocase subunit SecY [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550345|gb|EFM38338.1| preprotein translocase subunit SecY [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 424
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 210/429 (48%), Gaps = 22/429 (5%)
Query: 18 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP---QDYLSFVSGSVDEL 73
A ++ FK +++++L T +++ + R+G +P+PG + +I Q Y SF S +L
Sbjct: 3 TAVKNAFKIPDLKKKLVYTILMLAVFRVGSAVPVPGINVEVIKSMLQQYSSF--SSFYDL 60
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
GA + F LG+ P + +SI++Q+L +PSL ++K G +G +KI ++++G
Sbjct: 61 VSGGALNNFTIFALGVGPYVTSSIIIQLLAVAIPSLEDMQKSGEEGRKKIMQLTRYVTVG 120
Query: 134 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
A+L++ +A ++ SHS + + L G+ + W+ + I+E G G G S+
Sbjct: 121 LALLQSTALAIGFFNSALI--SHSRLNELSVVLTLTAGSAFLMWLGEQITEKGIGNGISI 178
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
+I GI++ K L + F++ L V + ++V E RKV +Q+
Sbjct: 179 LIFAGIVSRIPGGAIKSYEMLRTGQLNIIEFIV-FLAVSLAIIAGVIMVLEATRKVPVQH 237
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP-FWQHV 312
A +IP IN +G+ PV+ + L P++L + +P + + V
Sbjct: 238 -----AKRVVGRKTYGGQTTHIPIKINQAGVIPVIFASSFLMMPNLLGMFIKNPGYTEFV 292
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGK 370
+ N + + G +VY + V F F +A + P EIAD L G IP ++PG
Sbjct: 293 NKYFNTQGTPGL--YVYAGLEFLLVLGFTYFYVAIIFKPDEIADNLKNSGGFIPGIRPGY 350
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
AT EYL I GG+ L++++ ++ + + F G TS+LI+VG ++
Sbjct: 351 ATAEYLDTISNRLTLAGGVFLALISAVPLLIIGF---TSIPFRFGGTSLLIVVGVALDTL 407
Query: 431 RSYQAYNVM 439
+ +A VM
Sbjct: 408 KQIEAQMVM 416
>gi|413916905|gb|AFW56837.1| chloroplast SecY-1 [Zea mays]
Length = 553
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 204/420 (48%), Gaps = 26/420 (6%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAE 79
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 134 DFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLL-GTLDSFSGGGIG 192
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILE 138
+L LGI P I A I+ Q+L + P L L RKEG G +K+ Y + S+GFAI++
Sbjct: 193 -RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAIVQ 251
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL+I
Sbjct: 252 AIGQVLYLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTS 308
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I++ + + ++Q + +L ++ F ++ + V V E RK+ L Y
Sbjct: 309 IISYLPASFGRTVAQAFQDG--NYVGLLTIILSFLLLVLGIVYVQEAERKIPLNY----- 361
Query: 259 ASAAREDSPITEVE--PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
A+R S E++ Y+PF +N SG+ P++ +T LA P LA G F + L
Sbjct: 362 --ASRYSSRTGELQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKKAAIAL 419
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
NP ++ V + AFF + + + P ++++ L + GA IP V+PGK+T Y+
Sbjct: 420 NPGGALYLPTNVL--LIAFFNYYYTFLQLD--PDDLSEQLKRQGASIPLVRPGKSTAAYI 475
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELRRSYQA 435
+ + G L++LA ++++ GF+ TSVLI+VG + R QA
Sbjct: 476 KTVLSRISVLGSAFLAVLAAGPSLVEQTSHLTAFRGFA--GTSVLILVGCATDTARKVQA 533
>gi|390934141|ref|YP_006391646.1| preprotein translocase subunit SecY [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569642|gb|AFK86047.1| preprotein translocase, SecY subunit [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 418
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 211/444 (47%), Gaps = 37/444 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFV 66
+LN+ ++ ++IR+++ T +++++ R+G IP+PG D I + +
Sbjct: 1 MLNSLVNAWKVADIRKKIIYTVLMLLVFRLGSHIPVPGIDPNQIKNILGQGTLFGFFDII 60
Query: 67 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 126
SG GA + F + I P I ASI+MQ+L +PSL Q+ KEG +G +KI Y
Sbjct: 61 SG--------GAFRDFTIFAMSIVPYINASIIMQLLTIAIPSLEQMAKEGEEGRKKIAQY 112
Query: 127 IWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
++++ A+++A+ ++ + ++ + L G + W+ + I+E+G
Sbjct: 113 TRYMTVVLALIQAI---GMTIGLRSAVIQPNFLNLTIIVLTLTAGTSFLMWLGERITENG 169
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G GSSLII GIL +Y + Q +G+ + L V ++ + ++++EG
Sbjct: 170 VGNGSSLIIFAGILARIPNMVYTTV-QYVGAGTANIFGAIAFLIVILVMVVSIILMSEGQ 228
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-G 305
R++ +QY A +IP IN +G+ P++ LL FP +A+
Sbjct: 229 RRIPVQY-----AKRVVGRKVYGGQSTHIPIRINMAGVIPLIFALSLLQFPQQIATFFPK 283
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARI 363
S F+ ++ L G W+Y + + F F A + P EI+D + K G I
Sbjct: 284 SAFYAFTEKWL------GTNGWIYNILNVLLIIFFTYFYTAIIFNPIEISDNMKKYGGFI 337
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PGK T +++T++ F G + L+++A I+ + G T++LI V
Sbjct: 338 PGIRPGKPTTDFITRVMNRVTFVGSIFLALVAVLPVIM---MNATGLQLYFGGTALLIAV 394
Query: 424 GSIIELRRSYQAYNVMPSLSKALR 447
G +E + + +M + LR
Sbjct: 395 GVALETMKQIEGQLIMRNYQGFLR 418
>gi|416079367|ref|ZP_11586181.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|444338533|ref|ZP_21152360.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|348003005|gb|EGY43662.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|443544923|gb|ELT54811.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 441
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 208/434 (47%), Gaps = 28/434 (6%)
Query: 26 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALGRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + + Q + + +L + + VT + V V G R++K++Y A
Sbjct: 195 AGLPAAVGQTIEQARLGQMHFLVLLL-IAVIVLAVTYFVVFVERGQRRIKVEY-----AK 248
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 316
+ + ++P +N +G+ P + + ++ FP+ L +G + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLL 308
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
+P +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 309 HP-----GQP-LYLVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSR 362
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ KI GG+ ++ + I+ N F G TS+LI+V I++ Q
Sbjct: 363 YIDKIMTRLTLIGGIYVTFVCLVPYIMTSAW---NVQFYFGGTSLLIVVVVIMDFIVQIQ 419
Query: 435 AYNVMPSLSKALRR 448
++ + AL++
Sbjct: 420 SHLMSTRYESALKK 433
>gi|268683265|ref|ZP_06150127.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae
SK-92-679]
gi|268623549|gb|EEZ55949.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae
SK-92-679]
Length = 436
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 212/439 (48%), Gaps = 24/439 (5%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 253
I GI +G + K+++ S+ +L + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALLIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 254 YGFKLASAARE-DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
A R+ + + ++PF +N +G+ P + + ++ FPS L GS V
Sbjct: 242 -------AKRQFNGRVGSQNTHMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSADTNSV 294
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGK 370
+ G +Y ++A V F F A + PKE+A+ L K GA +P ++PG+
Sbjct: 295 LHKIAGLLQHGQ--LLYMALFAATVIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGE 352
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIEL 429
T YL K+ +G L + T+ ++ +L + N F +G TS+LI+V ++
Sbjct: 353 QTSRYLEKVVLRLTLFGALYI----TTICLIPEFLTTVLNVPFYLGGTSLLILVVVTMDF 408
Query: 430 RRSYQAYNVMPSLSKALRR 448
+Y + K + R
Sbjct: 409 STQINSYRLTQQYDKLMTR 427
>gi|302543341|ref|ZP_07295683.1| preprotein translocase, SecY subunit [Streptomyces hygroscopicus
ATCC 53653]
gi|302460959|gb|EFL24052.1| preprotein translocase, SecY subunit [Streptomyces himastatinicus
ATCC 53653]
Length = 437
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 210/441 (47%), Gaps = 36/441 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T +IV+ R+G +P+PG D + + Q + G G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLAIIVLFRLGQHVPIPGIDYKNV-QTCMDLAKGQQGLFG 59
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQTGQAKITQYTRY 119
Query: 130 ISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICD 180
+++ AIL+ + + S++ + S+ V + G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGSLFQSCPVGSQIVRDDSIFTTAVMVITMTAGTALIMWLGE 179
Query: 181 TISESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMW 238
+++ G G G S+++ V I G+ ++ K +++G W F L + +V +
Sbjct: 180 LVTDRGIGNGMSILMFVSIAAGFPSAMWSIKQQGKIMGG---WLEFGLVIACGLAMVAL- 235
Query: 239 AVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 298
V V + R++ +QY + + + YIP +N +G+ PV+ + LL P+
Sbjct: 236 VVFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPMKVNQAGVIPVIFASSLLYIPA 290
Query: 299 ILASILGSPF-WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIAD 354
++ S W + ++ G P +Y T Y + F F +A N P+E+AD
Sbjct: 291 LIVQFSQSKAGWAN---WISQNLVKGDHP-IYITAYFLLIVFFAFFYVAISFN-PEEVAD 345
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 414
+ K G IP ++ G+ T EYL+ + + G L L ++A T+ L N+ F
Sbjct: 346 NMKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGALYLGLIALVPTVALVTLNA-NQNFPF 404
Query: 415 GFTSVLIIVGSIIELRRSYQA 435
G TS+LIIVG +E + ++
Sbjct: 405 GGTSILIIVGVGLETVKQIES 425
>gi|225376428|ref|ZP_03753649.1| hypothetical protein ROSEINA2194_02070 [Roseburia inulinivorans DSM
16841]
gi|225211804|gb|EEG94158.1| hypothetical protein ROSEINA2194_02070 [Roseburia inulinivorans DSM
16841]
Length = 443
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 195/402 (48%), Gaps = 30/402 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F +IR+R+ T +++V+ RIG +P+PG D + F S + D +G
Sbjct: 1 MLETLRNAFKIKDIRKRIIFTFLMLVVIRIGSQLPIPGVDSEVFAN---WFASQTADGMG 57
Query: 75 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
F G+ L LS F L I+P I +SI+MQ+L +P L +++++G DG +KI +
Sbjct: 58 FFDAVTGGSFLNLSIFALNITPYITSSIIMQLLTIAIPKLEEMQRDGEDGRKKIAEITRY 117
Query: 130 ISLGFAILEAVIVACYSLPYSIYAASHS----VKHVMVTAFLLVCGAMTMSWICDTISES 185
+++ A++EA+ +A S S V ++++ F L G+ + WI + I+E
Sbjct: 118 LTVALALIEAIAMAIGFSRGGYLEQSDSTAVYVMNIIMVIFTLTAGSAVLMWIGERITEK 177
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM--WAVVVT 243
G G G S+++ + I++ + + Q + + ++ + IV M + V++
Sbjct: 178 GVGNGISIVLTINIISRMPNDIGTLYQQFISGKTVPKGILAAVIILAIIVAMVVFVVLLQ 237
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
+G RK+ +QY + + + +IP +N SG+ PV+ LL P I+AS+
Sbjct: 238 DGVRKIPVQY-----SKKIQGRKQVGGQSTHIPLKVNTSGVIPVIFAQSLLQTPVIIASL 292
Query: 304 LGSPFWQHV-KEIL---------NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIA 353
LG + +IL NP + V Y I F + I P EIA
Sbjct: 293 LGKGNGTGIGSKILKGMSQSNWCNPNEPIYNIGLVVYIIL-IIAFAYFYTSITFNPLEIA 351
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILA 395
+ + K G IP ++PGK T +YL KI F G + L+ +A
Sbjct: 352 NNMKKAGGFIPGIRPGKPTSDYLNKILNYIVFIGAVGLAFVA 393
>gi|326390642|ref|ZP_08212197.1| preprotein translocase, SecY subunit [Thermoanaerobacter
ethanolicus JW 200]
gi|392939557|ref|ZP_10305201.1| preprotein translocase, SecY subunit [Thermoanaerobacter
siderophilus SR4]
gi|325993320|gb|EGD51757.1| preprotein translocase, SecY subunit [Thermoanaerobacter
ethanolicus JW 200]
gi|392291307|gb|EIV99750.1| preprotein translocase, SecY subunit [Thermoanaerobacter
siderophilus SR4]
Length = 418
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 208/430 (48%), Gaps = 31/430 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 80
+IR+R+ T ++VI R+G IP+PG D +LI Q + G G F GA
Sbjct: 12 DDIRKRILYTLGMLVIFRLGSHIPVPGVDPKLIAQ-----ILGQGQLFGFFDIISGGAFR 66
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+ + F + I P I ASI+MQ+L +PSL Q+ KEG +G +KI Y ++++ A+++A+
Sbjct: 67 EFTIFAMSIVPYINASIIMQLLTIAIPSLEQMAKEGEEGRKKIAQYTRYLTVVLALIQAI 126
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
++ + + ++ V L G + W+ + I+E+G G GSSLII GI+
Sbjct: 127 ---GMTIGLKRAVINPTFFNLTVIVITLTAGTAFLMWLGEKITENGIGNGSSLIIFAGII 183
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
+ +Y + S+ + + + + I+ + ++ TEG R++ +QY A
Sbjct: 184 SRIPNMIY-LTSEYIQAGTANIFGAIAFVVAELIMIVLIILATEGQRRIPVQY-----AK 237
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILNPE 319
+IP IN +G+ P++ LL FP LA+ S F+ V++ L+
Sbjct: 238 RVVGRKVYGGQSTHIPIRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQKWLSTS 297
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLT 377
+Y + + F F A + P +++D L K G IP ++PGK T +YLT
Sbjct: 298 G------LIYNILDILLIIGFTYFYTAVIFNPVDVSDNLKKYGGFIPGIRPGKPTTDYLT 351
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYN 437
++ F G L L+ +AT IL + G T++LI VG ++ + + +
Sbjct: 352 RVLNRVTFVGALFLAFIATMPVIL---MNVTGLQLYFGGTALLIAVGVALDTMKQIEGHL 408
Query: 438 VMPSLSKALR 447
+M + L+
Sbjct: 409 IMRNYQGFLK 418
>gi|394989446|ref|ZP_10382279.1| preprotein translocase subunit SecY [Sulfuricella denitrificans
skB26]
gi|393790946|dbj|GAB71918.1| preprotein translocase subunit SecY [Sulfuricella denitrificans
skB26]
Length = 443
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 207/435 (47%), Gaps = 30/435 (6%)
Query: 13 SSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE 72
+S+L+ A F +R LFV A L+V RIG FIP+PG D + + + G +
Sbjct: 6 NSLLSAAGAGKFGDLKKRLLFVLAALVVY-RIGTFIPVPGIDPMALESLFKTQSGGILGM 64
Query: 73 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
F GA + S F LGI P I ASI+MQ++ + P L QL+KEG G +KI Y +
Sbjct: 65 FNMFSGGALSRFSVFALGIMPYISASIIMQLMTVVSPQLEQLKKEGESGRKKITQYTRYG 124
Query: 131 SLGFAILEA--VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
++ A+ + + +A S P + + V LV G M + W+ + I+E G G
Sbjct: 125 TVFLALFQGLGISIALESQPGLVIEPGLLFRLTAVAT--LVTGTMFIMWLGEQITERGIG 182
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
G SLII GI G + L +L + P +L L V VT + V V G RK
Sbjct: 183 NGISLIIFAGIAAGLPHAIGGTL-ELTRTGAFSIPLVLMLFVVAIGVTAFVVFVERGQRK 241
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP- 307
+ + Y ++ + ++P +N SG+ P + + ++ FP+ LA GS
Sbjct: 242 ILVNYAKRQVGNKIYGGQ-----SSHLPLKLNMSGVIPPIFASSIILFPATLAGWFGSSD 296
Query: 308 ---FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGAR 362
+ + + L+P +P +Y +Y+ + F F A + PKE AD L K GA
Sbjct: 297 GMSWLKDIGSSLSP-----GQP-LYVMLYSLAIVFFCFFYTALVFNPKETADNLKKSGAF 350
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLI 421
+P ++PG T Y+ +I + G ++ T+ +L +L + N F G TS+LI
Sbjct: 351 VPGIRPGDQTARYIDRIMSRLTLSG----AVYITTVCLLPEFLIVKWNVPFYFGGTSLLI 406
Query: 422 IVGSIIELRRSYQAY 436
IV ++ Q+Y
Sbjct: 407 IVVVTMDFMAQVQSY 421
>gi|34499621|ref|NP_903836.1| preprotein translocase subunit SecY [Chromobacterium violaceum ATCC
12472]
gi|34105471|gb|AAQ61826.1| preprotein translocase secY subunit [Chromobacterium violaceum ATCC
12472]
Length = 439
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 206/422 (48%), Gaps = 29/422 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+++RR++ +++ RIG IP+PG + + + + + +G +D F GA + +
Sbjct: 14 GDLKRRIWFLIGALIVYRIGAHIPVPGINPAELAKLFHTSQTGLLDMFNMFSGGALSRFT 73
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA--VI 141
F LGI P I ASI++Q+ ++PSL QL+KEG G KI Y + ++ A ++ +
Sbjct: 74 VFALGIMPYISASIILQLAAEVLPSLKQLKKEGDAGRRKITQYTRYATVALATFQSFGIA 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V Y P + A + + T LV G M + W+ + I+E G G G SLIIC GI
Sbjct: 134 VMLYKQPNLVMTAQW--EFYLTTVVSLVTGTMFLMWLGEQITERGIGNGISLIICAGIAA 191
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 261
G + K L+ S+ +L +GV +VT V G RKV + Y ++ +
Sbjct: 192 GVPAAIGKTLTLTSQGSLPILFAILLFVGVI-LVTFLVVYAERGQRKVLVNYAKRQVGNR 250
Query: 262 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEILN 317
+ ++P +N +G+ P + + ++ FP+ + G + + V + L+
Sbjct: 251 VMQGQ-----STHLPLKLNMAGVIPPIFASSIILFPATVLGWFGQGEHMAWLKGVADKLH 305
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEY 375
P +P +Y +YA + F F A + PKE AD L K GA IP ++PG+ T Y
Sbjct: 306 P-----GQP-IYVLLYAAAIIFFCYFYTALVFNPKETADNLKKSGAFIPGIRPGEQTSRY 359
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
+ KI G + ++++ +L +L + N F G TS+LIIV ++ Q
Sbjct: 360 IEKIILRLTLIGAIYITLVC----LLPEFLILKWNVPFYFGGTSLLIIVVVTMDFMAQVQ 415
Query: 435 AY 436
+Y
Sbjct: 416 SY 417
>gi|283768443|ref|ZP_06341355.1| preprotein translocase, SecY subunit [Bulleidia extructa W1219]
gi|283104835|gb|EFC06207.1| preprotein translocase, SecY subunit [Bulleidia extructa W1219]
Length = 428
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 214/424 (50%), Gaps = 26/424 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR-RLIPQDYLSFVSGSVDEL 73
+L A F E R ++F T +++I R G IP+PG + + Q + + G ++ L
Sbjct: 1 MLGTFASLFKNKETRNKIFFTLAMLLIYRFGSAIPVPGVNTAQFAKQIAGNSLLGMMNLL 60
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLC-HIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G GA +LS F +G++P I ASI++Q+L ++PSL ++ K G G KI+ ++ +
Sbjct: 61 GG-GALERLSIFAMGVTPYITASIIIQLLSMDVIPSLTEMSKSGQTGRVKIEKTTRYLGV 119
Query: 133 GFAILEAV-IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
A +++ +V + + Y I ++ + + TA ++ G M + W+ D IS G G G
Sbjct: 120 VLAFVQSFSLVYGFDVQYKILQNAN-LSGYLYTATVMSAGTMFLIWVGDRISMKGIGNGL 178
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPF----MLGL-LGVFTIVTMWAVVVTEGC 246
S+II GI++ + + ++ + L G S R F GL + +F + ++ +++
Sbjct: 179 SMIIFAGIVSNFPASFGQVYAILTGGSSRGEVFNGILQFGLYVLLFLAIVIFVIIMETAI 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY +S R + +T ++P IN + + PV+ ++ P I+ S +
Sbjct: 239 RKIPVQYTN---SSTTRGGADVT----FLPLKINSASVIPVIFAQSIMLAPQIIISFFNT 291
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
+ + + L+ + W +YA LF F D+ P ++AD L K GA IP
Sbjct: 292 SLYNKLSQWLSLTS------WTGLGLYAVLTILFTFFYTDLQVDPDQMADNLGKSGAYIP 345
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG T Y++K+ G + L+I+A +L + +++ ++ T ++I+VG
Sbjct: 346 GIRPGNETKVYVSKVLHRITVLGAIGLTIIAVLPYLLTKF-TNLSQATAVSGTGIIIVVG 404
Query: 425 SIIE 428
+E
Sbjct: 405 VALE 408
>gi|184200281|ref|YP_001854488.1| preprotein translocase subunit SecY [Kocuria rhizophila DC2201]
gi|183580511|dbj|BAG28982.1| preprotein translocase SecY subunit [Kocuria rhizophila DC2201]
Length = 437
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 202/438 (46%), Gaps = 31/438 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL--SFVSGSVDE 72
+L+ A +F E+R +L T +IVI R+G FIP PG D + Q + G+ D
Sbjct: 1 MLSAFARAFTTPELRNKLLFTLGIIVIYRLGTFIPAPGVDYGNVQQCLAMGNTTGGAYDL 60
Query: 73 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ F GA L+LS F LG+ P I ASI++Q+L ++P +L +EG G K+ Y ++
Sbjct: 61 VNLFSGGALLQLSVFALGVMPYITASIIVQLLRVVIPRFQELHEEGAQGQTKLTQYTRYL 120
Query: 131 SLGFAILEAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTIS 183
++G A L A V + ++ S+ ++V + G + W+ + I+
Sbjct: 121 TIGLAALNATTVISLARSGNLLGNCPLPVIPDDSLFVLVVMIITMTAGTTVIMWLGERIT 180
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 243
+ G G G SL+I I + L ++L R W LG+ + +V V V
Sbjct: 181 DRGVGNGMSLLIFTSIAATFPSALGEIL------RTRGWGIFLGVCAIGLVVITCVVFVE 234
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
+ R++ +QY A I YIP +N +G+ P++ + +L P++LA
Sbjct: 235 QSQRRIPVQY-----AKRMVGRRTIGGTSTYIPLKVNMAGVIPIIFASSMLMLPTMLAQF 289
Query: 304 L----GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLN 357
GSP V I N + G P VY T+Y + F F I P+E+++ +
Sbjct: 290 AMPDDGSPVPGWVNWI-NTYLARGDHP-VYMTVYFLLIVAFTYFYVSITFNPEEVSNNMK 347
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
+ G IP V+ G+ T YL + + G L L IL+ I N+ F G
Sbjct: 348 RYGGFIPGVRAGRPTENYLRYVLSRITLPGALYLGILSMIPLIALVAFGA-NQNFPFGGP 406
Query: 418 SVLIIVGSIIELRRSYQA 435
S+LI+VG ++ + A
Sbjct: 407 SLLIMVGVGLDTVKQIDA 424
>gi|381388744|ref|NP_001105505.2| preprotein translocase subunit SECY, chloroplastic [Zea mays]
gi|194701264|gb|ACF84716.1| unknown [Zea mays]
Length = 553
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 204/420 (48%), Gaps = 26/420 (6%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAE 79
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 134 DFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLL-GTLDSFSGGGIG 192
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILE 138
+L LGI P I A I+ Q+L + P L L RKEG G +K+ Y + S+GFAI++
Sbjct: 193 -RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAIVQ 251
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL+I
Sbjct: 252 AIGQVLYLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTS 308
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I++ + + ++Q + +L ++ F ++ + V V E RK+ L Y
Sbjct: 309 IISYLPASFGRTVAQAFQDG--NYVGLLTIILSFLLLVLGIVYVQEAERKIPLNY----- 361
Query: 259 ASAAREDSPITEVE--PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
A+R S E++ Y+PF +N SG+ P++ +T LA P LA G F + L
Sbjct: 362 --ASRYSSRTGELQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKKAAIAL 419
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
NP ++ V + AFF + + + P ++++ L + GA IP V+PGK+T Y+
Sbjct: 420 NPGGALYLPTNVL--LIAFFNYYYTFLQLD--PDDLSEQLKRQGASIPLVRPGKSTAAYI 475
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELRRSYQA 435
+ + G L++LA ++++ GF+ TSVLI+VG + R QA
Sbjct: 476 KTVLSRISVLGSAFLAVLAAGPSLVEQTSHLTAFRGFA--GTSVLILVGCATDTARKVQA 533
>gi|345018515|ref|YP_004820868.1| preprotein translocase subunit SecY [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033858|gb|AEM79584.1| preprotein translocase, SecY subunit [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 418
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 209/430 (48%), Gaps = 31/430 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 80
+IR+R+ T ++VI R+G IP+PG D +LI Q + G G F GA
Sbjct: 12 DDIRKRILYTLGMLVIFRLGSHIPVPGVDPKLIAQ-----ILGQGQLFGFFDIISGGAFR 66
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+ + F + I P I ASI+MQ+L +PSL Q+ KEG +G +KI Y ++++ A+++A+
Sbjct: 67 EFTIFAMSIVPYINASIIMQLLTIAIPSLEQMAKEGEEGRKKIAQYTRYLTVVLALIQAI 126
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ I ++ +++T L G + W+ + I+E+G G GSSLII GI+
Sbjct: 127 GMTIGLKSAVINPTFFNLTVIVIT---LTAGTAFLMWLGEKITENGIGNGSSLIIFAGII 183
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
+ +Y + S+ + + + + I+ + ++ TEG R++ +QY A
Sbjct: 184 SRIPNMIY-LTSEYIQAGTANIFGAIAFVVAELIMIVLIILATEGQRRIPVQY-----AK 237
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILNPE 319
+IP IN +G+ P++ LL FP LA+ S F+ V++ L+
Sbjct: 238 RVVGRKVYGGQSTHIPIRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQKWLSTS 297
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLT 377
+Y + + F F A + P +++D L K G IP ++PGK T +YLT
Sbjct: 298 G------LIYNILDILLIIGFTYFYTAVIFNPVDVSDNLKKYGGFIPGIRPGKPTTDYLT 351
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYN 437
++ F G L L+ +AT IL + G T++LI VG ++ + + +
Sbjct: 352 RVLNRVTFVGALFLAFIATMPVIL---MNVTGLQLYFGGTALLIAVGVALDTMKQIEGHL 408
Query: 438 VMPSLSKALR 447
+M + L+
Sbjct: 409 IMRNYQGFLK 418
>gi|89893237|ref|YP_516724.1| preprotein translocase subunit SecY [Desulfitobacterium hafniense
Y51]
gi|423073108|ref|ZP_17061851.1| preprotein translocase, SecY subunit [Desulfitobacterium hafniense
DP7]
gi|89332685|dbj|BAE82280.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361855938|gb|EHL07872.1| preprotein translocase, SecY subunit [Desulfitobacterium hafniense
DP7]
Length = 429
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 214/439 (48%), Gaps = 54/439 (12%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 80
EIR ++ T ++ +I RIG IP+P I D LS + GS L DF G+
Sbjct: 14 EIRTKIGFTLLMFLIFRIGAHIPIP-----FINHDILSNILGS-GTLYDFLDTFSGGSFR 67
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY----------IWWI 130
+ S F L I+P I ASI++Q+L ++PSL +L KEG G +KI Y I
Sbjct: 68 RFSVFALSITPYITASIILQLLTIVIPSLERLAKEGEFGRKKITQYTRYGTVILGFIQGF 127
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
+ F + A+I+ + ++IY ++ A +L G + W+ + I+E+G G G
Sbjct: 128 GMTFGLRGALIIPKPGMEWAIY---------LLVALILTAGTAFLMWLGERITENGIGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SLII GI+ G + + ++ L + + + GL+ + + V + EG R+++
Sbjct: 179 ISLIIFAGIVAGVPDAIKRIAGLLSVGEINVFS-VFGLIVIGLGIIAGVVFIQEGQRRIQ 237
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPF 308
+QY A +IP +N +G+ P++ LLAFPS +A+ + S +
Sbjct: 238 VQY-----AKRVVGRRVYGGQSSHIPMKVNQAGVIPIIFAISLLAFPSTIATWMDPASAY 292
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNV 366
+ V S+ + P Y +YA + F F ++ P ++AD L K G IP +
Sbjct: 293 VRFVNTWFVMNGSLTSIP--YLIVYAVLIIFFTYFYTAVSFNPVDVADNLKKYGGFIPGL 350
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PG+AT +YL+KI + GG L+++A +++ N ++G TS+LI+V
Sbjct: 351 RPGRATSDYLSKILSRLTLAGGTFLAMIAVLPSLVIGLTGIPN--ITLGGTSLLIVVSVA 408
Query: 427 IE---------LRRSYQAY 436
+E ++R YQ +
Sbjct: 409 LETMKQLESMLMQRHYQGF 427
>gi|145636644|ref|ZP_01792311.1| preprotein translocase subunit SecY [Haemophilus influenzae PittHH]
gi|145270170|gb|EDK10106.1| preprotein translocase subunit SecY [Haemophilus influenzae PittHH]
Length = 436
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 206/435 (47%), Gaps = 28/435 (6%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 143 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 259
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 315
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
LNP +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTS 361
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
Y+ K+ GGL ++ + I+ + F G TS+LI+V I++
Sbjct: 362 RYIDKVMTRLTLIGGLYVTFVCLVPYIMTSAW---DVKFYFGGTSLLIVVVVIMDFIVQV 418
Query: 434 QAYNVMPSLSKALRR 448
Q++ + AL +
Sbjct: 419 QSHLMSSQYESALEK 433
>gi|407454932|ref|YP_006733823.1| preprotein translocase subunit secY [Chlamydia psittaci GR9]
gi|407460283|ref|YP_006738058.1| preprotein translocase subunit secY [Chlamydia psittaci WC]
gi|449070755|ref|YP_007437835.1| preprotein translocase subunit SecY [Chlamydophila psittaci Mat116]
gi|405781475|gb|AFS20224.1| preprotein translocase subunit secY [Chlamydia psittaci GR9]
gi|405786678|gb|AFS25422.1| preprotein translocase subunit secY [Chlamydia psittaci WC]
gi|449039263|gb|AGE74687.1| preprotein translocase subunit SecY [Chlamydophila psittaci Mat116]
Length = 457
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 221/456 (48%), Gaps = 39/456 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 76
+ F +E+R++LF T L+ RIG FIP+PG + + + S + +L D
Sbjct: 6 QIFSIAELRQKLFFTFALLAACRIGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +PS+ + +E D G KI ++G
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLLVFMPSIQREMRESPDQGKRKIGRLTRLFTVGL 125
Query: 135 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A ++L P + S K + T ++ G + + WI +
Sbjct: 126 AFIQSLLFAKFALKMNMAIPGIVLPTLLSSKLFGAPWIFYLTTVIVMTTGTLLLMWIGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 237
IS+ G G G SLII +GIL + L ++++L LGS S +L L +F V +
Sbjct: 186 ISDKGIGNGVSLIISLGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCLIFVFVLV 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
+++ EG RK+ +QY + RE I Y+P +N +G+ PV+ + LL FP
Sbjct: 246 TTILIIEGVRKIPVQYA--RRVIGRRE---IPGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 298 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIA 353
+ + + S + + V +L+P + WVY + Y + F F A P++IA
Sbjct: 301 ATIGQFMSSDSSWLKRVAMMLSPGS------WVYSSCYVLLIIFFTYFWTATQFHPEQIA 354
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGF 412
+ K A IP ++ GK T YL G + L+++A +IL L N +
Sbjct: 355 SEMKKNNAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVIAILPSILGRVLNVDTNVSY 414
Query: 413 SIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+G T++LI+VG +++ + A+ +M L++
Sbjct: 415 FLGGTAMLIVVGVVLDTMKQVDAFLLMRRYDSFLKK 450
>gi|415726182|ref|ZP_11470683.1| preprotein translocase subunit SecY [Gardnerella vaginalis
00703Dmash]
gi|388064055|gb|EIK86623.1| preprotein translocase subunit SecY [Gardnerella vaginalis
00703Dmash]
Length = 446
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 208/432 (48%), Gaps = 30/432 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++F E+R ++ +I+I RIG FIP+PG D ++I S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVIRACTAKLASSKENFIGLVNLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 136 ILEA--VIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFG 188
+L++ ++V S Y + ++V ++ G + W+ + I++ G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCGQVIPDGGFWSLVVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
QG S++I + I +G+ L+++ GS+ W F + + GV ++ ++ V R+
Sbjct: 186 QGMSVLIFMSICSGFLPKLWEIGWGTNGSNGDWTKFSI-VGGVLLVILVFVDFVELAQRR 244
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI--LGS 306
+ +QY + S Y+P IN SG+ P + + +LA P+++A
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAVPTLIAQFGDKSK 299
Query: 307 PFWQHVKEILNPETSVGARPW--VYYTIY-AFFVFLFNIFDIANLPKEIADYLNKMGARI 363
P+ Q ++E L TS W +YT+ FF F + +I E AD + + G I
Sbjct: 300 PWVQWIEENLANSTSA----WYIAFYTVMIVFFCFFYT--EITFNTDETADNMKEYGGFI 353
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++ G AT YL+ + G + L +A T+L L +N G T++LII
Sbjct: 354 PGIRAGSATSNYLSYVMNRLNTVGAIYLLFVALIPTVLIMAL-HLNTKLPFGGTTILIIA 412
Query: 424 GSIIELRRSYQA 435
G ++ R +A
Sbjct: 413 GVGLDTLRQAKA 424
>gi|426404867|ref|YP_007023838.1| preprotein translocase subunit SecY [Bdellovibrio bacteriovorus
str. Tiberius]
gi|425861535|gb|AFY02571.1| preprotein translocase subunit SecY [Bdellovibrio bacteriovorus
str. Tiberius]
Length = 442
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 208/434 (47%), Gaps = 26/434 (5%)
Query: 18 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
+A ES K S++R+R+ T L+ I RIG +P PG D + + + G F
Sbjct: 2 SAIESIAKNSDLRKRILFTLALLAIYRIGVHVPTPGVDGSAVLSFFQAQSRGIFGLFNTF 61
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA + S F LGI P I +SI+ Q+L +P L L+KEG G KI Y + ++
Sbjct: 62 TGGALSQFSIFALGIMPYISSSIIFQLLTSAIPYLEALKKEGEQGRRKINQYTRYATVAL 121
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFL---------LVCGAMTMSWICDTISES 185
AI++ ++ + L S H + AFL L G + W+ + I+E
Sbjct: 122 AIIQGYGISTW-LMNSTSPDGHPLVIAPTVAFLPFQIMTIITLTAGTCFIMWLGEQITER 180
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE- 244
G G G+SLII GI + ++ + +R+ ++ LL F + + AV+ E
Sbjct: 181 GIGNGTSLIIFTGIAAAIPGGVQQLWELVRTGEMRFA--LVLLLVAFMVAIIAAVIYMEV 238
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
R++ +QY + + T ++P +N SG+ P + + LL FP+ +A +
Sbjct: 239 AQRRITVQYSQRQGGGGMQSMQTPTS---HLPIKLNISGVIPPIFASSLLMFPATMAQFV 295
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIP 364
+P+ + +++ LNP ++ ++ + FF F + +I P ++AD L K G +P
Sbjct: 296 NTPWLKALQDSLNPSGTI--FNIMFVALIVFFSFFYT--EIVFNPNDVADNLKKYGGFVP 351
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
V+ GK+T +Y+ ++ G + L + I+ + + N F G TS+LI+VG
Sbjct: 352 GVRAGKSTADYIQRVLERVNVVGCIYLCTICILPGIM---VNQFNVPFHFGGTSLLILVG 408
Query: 425 SIIELRRSYQAYNV 438
++ + Q++ +
Sbjct: 409 VALDTAQQIQSHMI 422
>gi|217967388|ref|YP_002352894.1| preprotein translocase subunit SecY [Dictyoglomus turgidum DSM
6724]
gi|217336487|gb|ACK42280.1| preprotein translocase, SecY subunit [Dictyoglomus turgidum DSM
6724]
Length = 419
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 215/446 (48%), Gaps = 40/446 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+ + +F ++R+++ T + + R+G IP+PG DR + + S G++ L
Sbjct: 1 MFDTLVRAFRIPDLRKKILFTLFIFAVYRLGAHIPVPGVDRVALANLFRS--QGALGFLD 58
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
F GA + S F +GI P I ASI+M++L + PSL +L+KE DG +K+ Y +S+
Sbjct: 59 LFTGGALSRFSIFSMGIIPFINASIMMELLTAVFPSLAELKKEE-DGRKKLTRYARNLSV 117
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
A +EA + + + + S S +V+ + L G+ + W+ + IS+ G G G S
Sbjct: 118 LLAAIEAFGLTIFMHNFKV-IPSLSPLYVISSVITLTAGSTFIMWLGEQISQYGIGNGVS 176
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV---------T 243
L+I I+ + L + + L G +G+ ++ +A+++
Sbjct: 177 LLILTSIVARFPTDLARTFALL----------SRGEIGILNVIAFFALLILIIIGVVWEE 226
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
R++ +QY + Y+P +N +G+ P++ +L P +
Sbjct: 227 SAERRIPVQYSRRIVGRRVYGGQ-----STYLPLKLNQAGVIPIIFAITILMVPQTFIPV 281
Query: 304 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFN--IFDIANLPKEIADYLNKMGA 361
+ + + I +P + + P +Y+ + F + ++ +FD P ++A+ K G
Sbjct: 282 AKVSWLKAILGIFSPNSVL--YPIIYFLLVLGFTYFYSSIVFD----PADLAENFKKYGG 335
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
IP V+PGK T EYL K F+GG+ L I+A T ++ L + E F +G TS+LI
Sbjct: 336 FIPGVRPGKPTEEYLAKTLNRLNFFGGVFLGIIALLPTFIER-LTGVTE-FQLGGTSILI 393
Query: 422 IVGSIIELRRSYQAYNVMPSLSKALR 447
+VG I+E ++ +A +M S LR
Sbjct: 394 MVGVILETIKTLEAQMIMKSYEGFLR 419
>gi|62184755|ref|YP_219540.1| preprotein translocase subunit SecY [Chlamydophila abortus S26/3]
gi|62147822|emb|CAH63568.1| putative preprotein translocase SecY subunit [Chlamydophila abortus
S26/3]
Length = 457
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 221/456 (48%), Gaps = 39/456 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 76
+ F +E+R++LF T L+ RIG FIP+PG + + + S + +L D
Sbjct: 6 QIFSIAELRQKLFFTFALLAACRIGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +PS+ + +E D G KI ++G
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLLVFMPSIQREMRESPDQGKRKIGRLTRLFTVGL 125
Query: 135 AILEAVIVACY------SLPYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A + S+P + S K + T ++ G + + WI +
Sbjct: 126 ACIQSLLFAKFALKMNMSIPGIVLPTLLSSKLFGAPWIFYLTTVIVMTTGTLLLMWIGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 237
IS+ G G G SLII +GIL + L ++++L LGS S +L L +F V +
Sbjct: 186 ISDRGIGNGVSLIISLGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCLIFVFVLV 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
+++ EG RK+ +QY + RE I Y+P +N +G+ PV+ + LL FP
Sbjct: 246 TTILIIEGVRKIPVQYA--RRVIGRRE---IPGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 298 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIA 353
+ + + S + + V +L+P + WVY + Y + F F A P++IA
Sbjct: 301 ATIGQFMSSDSSWLKRVAMMLSPGS------WVYSSCYVLLIIFFTYFWTATQFHPEQIA 354
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGF 412
+ K A IP ++ GK T YL G + L+++A +IL L N +
Sbjct: 355 SEMKKNNAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVIAILPSILGRVLNVDANVSY 414
Query: 413 SIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+G T++LI+VG +++ + A+ +M L++
Sbjct: 415 FLGGTAMLIVVGVVLDTMKQVDAFLLMRRYDSFLKK 450
>gi|390438076|ref|ZP_10226574.1| Preprotein translocase secY subunit [Microcystis sp. T1-4]
gi|389838476|emb|CCI30698.1| Preprotein translocase secY subunit [Microcystis sp. T1-4]
Length = 439
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/433 (30%), Positives = 215/433 (49%), Gaps = 29/433 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL +T L+V+ R G F+P+PG DR + + S + + +L
Sbjct: 10 TAQETFMQMAQAAGLRGRLLITLGLLVLLRFGMFVPIPGLDRARLAEIIQSNAALGILDL 69
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 132
G L F LGI P I ASI++Q+L +PSL L+K EG G KI +++
Sbjct: 70 FTGGGLSTLGIFALGILPYINASIIVQLLTAALPSLEDLQKNEGEAGRRKIAQITRYVAF 129
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
G+AI++++ + L + + ++ + T LV G+M + WI + I+E G G G+S
Sbjct: 130 GWAIIQSIGI-TLGLLVANGVVAGTLPSIAATVLALVAGSMFVMWISELITERGLGNGAS 188
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
L+I V I+ +TL ++ + ++ LL VF ++ + V V EG R++
Sbjct: 189 LLIFVNIVAVLPKTLGDTITFAQQGGRQAIAQVVILLLVFLVMIIGIVFVQEGTRRI--- 245
Query: 253 YYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPF 308
+ SA R+ E Y+P +N G+ P++ + +L P L L +P
Sbjct: 246 ----PIVSARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLVLPFQLVQALPTDNPV 301
Query: 309 WQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGARI 363
Q + +++N RP W Y Y+ + F+ F I N PK+++ L KMG I
Sbjct: 302 GQVLVQLVN-----ALRPDSWGYVAFYSLLILGFSFFYASLIVN-PKDMSQNLKKMGTSI 355
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PG AT YL + G L LS++AT T+++ + +G TS+LI+V
Sbjct: 356 PGIRPGTATTNYLEGVLNRLTLLGALFLSLVATVPTVVESA-TGVTTFRGLGATSLLILV 414
Query: 424 GSIIELRRSYQAY 436
G I+ + Q Y
Sbjct: 415 GVAIDTAKQIQTY 427
>gi|254391373|ref|ZP_05006576.1| preprotein translocase subunit secY [Streptomyces clavuligerus ATCC
27064]
gi|294814487|ref|ZP_06773130.1| Preprotein translocase secY subunit [Streptomyces clavuligerus ATCC
27064]
gi|326442876|ref|ZP_08217610.1| preprotein translocase subunit SecY [Streptomyces clavuligerus ATCC
27064]
gi|197705063|gb|EDY50875.1| preprotein translocase subunit secY [Streptomyces clavuligerus ATCC
27064]
gi|294327086|gb|EFG08729.1| Preprotein translocase secY subunit [Streptomyces clavuligerus ATCC
27064]
Length = 439
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 209/440 (47%), Gaps = 32/440 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI------PQDYLSFVSG 68
+L A +F ++R++L T +IV+ R+G IP PG D + + Q+ + + G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLAIIVLYRLGSHIPTPGIDYQNVQICVDQAQENNNSLFG 60
Query: 69 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
V+ GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 LVNMFSG-GALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTR 119
Query: 129 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVM---------VTAFLLVCGAMTMSWIC 179
++++ A+L+ + + ++++ ++ + G + W+
Sbjct: 120 YLTIALAVLQGTGLVATARSGALFSGCQVANQIVPDQSIFTTVTMVITMTAGTAAVMWLG 179
Query: 180 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 239
+ I++ G G G S+++ + I G+ L+ + G + W ++ V ++
Sbjct: 180 ELITDRGIGNGMSILMFISIAAGFPGQLWAIKES--GKLAQGWIEFGTVIAVGFVMVGLV 237
Query: 240 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V V + R++ +QY + + + YIP +N +G+ PV+ + LL P++
Sbjct: 238 VFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPAL 292
Query: 300 LASIL-GSPFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADY 355
+A G+ W K + G P+ Y+ + FF F + I+ P+E+AD
Sbjct: 293 VAQFSSGTSEW---KTWIEKYFVTGDHPYYITAYFILIVFFAFFY--VAISFNPEEVADN 347
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
+ K G IP ++ G+ T EYL+ + + G L L ++A T+ + N+ F G
Sbjct: 348 MKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAFFGGANQNFPFG 407
Query: 416 FTSVLIIVGSIIELRRSYQA 435
TS+LIIVG +E + ++
Sbjct: 408 GTSILIIVGVGLETVKQIES 427
>gi|297621702|ref|YP_003709839.1| Preprotein translocase subunit SecY [Waddlia chondrophila WSU
86-1044]
gi|297377003|gb|ADI38833.1| Preprotein translocase subunit SecY [Waddlia chondrophila WSU
86-1044]
Length = 456
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 217/454 (47%), Gaps = 48/454 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 80
E+R+++ T +++V+ RIG FIP+PG + + Q YL ++G L GA
Sbjct: 13 ELRQKISFTLLMLVVCRIGAFIPVPGINGEVAIQ-YLRHLTGGEQNLFRMVDTFTGGAFS 71
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLV-QLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+++ LG+ P I ASI+MQ+ ++PSL ++++ G K+ ++L A +++
Sbjct: 72 QMTVIALGVVPYISASIMMQLFTALIPSLQREIQENPTLGRRKVNRLTRLVTLILAFIQS 131
Query: 140 VIVACYSLPYSIYAAS-------------HSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
+ A Y++ +I H V V F + G + + WI + I+E+G
Sbjct: 132 AMFAKYAIQMNITKPGIIAGDLLNIQMFGHPVLFYAVMIFTMTTGTLFLMWIGEQITENG 191
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG----LLGVFTIVTMWAVVV 242
G G SLII +GI++ + + + QL S ++ VF +VT+ +++
Sbjct: 192 IGNGMSLIITLGIISSFPTAIGMIFQQLNLDSQEAGQLNFAIVAVIMAVFVLVTIGTILI 251
Query: 243 TEGCRKVKLQYYGFKLASAAREDSPITEVE---PYIPFNINPSGMQPVLTTTYLLAFPSI 299
+G R++ LQY AR EV+ YIP +N +G+ PV+ + LL FP+
Sbjct: 252 VQGHRRIPLQY--------ARRVVGRKEVQGGNSYIPLKVNYAGVIPVIFASSLLMFPAT 303
Query: 300 LASILGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYL 356
+A+ +G W + V + + Y +Y + F F A P +IA +
Sbjct: 304 IATFIGQGTWLESVAMWFRQDRT------AYMVMYVGLIIFFTYFWTATQFRPDQIASDM 357
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--I 414
K GA IP ++ G+ T EYL G + L+++A TI L +++ S
Sbjct: 358 KKNGAFIPGIRQGRPTQEYLEHTMNRITLIGAVFLALIAILPTITGRVL-GVSQTISYFF 416
Query: 415 GFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
G T++LI+VG +++ + +++ +M +++
Sbjct: 417 GGTALLILVGVVLDTMKQIESHLLMKRYEGFMKK 450
>gi|436842964|ref|YP_007327342.1| preprotein translocase subunit [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
gi|432171870|emb|CCO25243.1| preprotein translocase subunit [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
Length = 436
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 200/420 (47%), Gaps = 22/420 (5%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E+++++F T +L+ + RIG IP+PG D + D+ VS ++ L D G LS
Sbjct: 14 ELKKKIFWTFLLLAVYRIGIHIPVPGVDSAAL-ADFFESVSNTLFGLFDMFSGGGLRNLS 72
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q+L + P L +L +EG G +KI Y + ++ I++ +A
Sbjct: 73 IFALGIMPYISASIIIQLLNVVSPELKRLSQEGAQGRKKITQYTRYATVAITIVQGFGIA 132
Query: 144 CYSLPYSIYAASHSVKHV-----MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+ + V H ++T L G + + W+ + ++E G G G S+II G
Sbjct: 133 MGLESMTSPTGAPVVLHAGWTFRLITILTLTAGTVFLMWLGEQMTEKGIGNGISMIIFAG 192
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ G ++ + + + + + L + I+ + V + G R++ + Y
Sbjct: 193 IVAGLPSAIFNTVRLMQAGEITLFLLLFVLAFMIAILA-FIVFMERGQRRIPIHY----- 246
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
A + ++P IN +G+ P + + +L FP+ LAS + V NP
Sbjct: 247 AKRMMGRKMMGGQTTHLPLRINTAGVIPPIFASSILMFPATLASFSDNEILSKVSAYFNP 306
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTK 378
+ + ++ I+ + + IFD PK IA+ + K G IP ++PG T EY+ +
Sbjct: 307 DAVIYNVIFIALIIFFCYFYTAIIFD----PKGIAENIQKQGGFIPGIRPGAKTREYIDR 362
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNV 438
+ A WG L ++ + +L + + N F G T++LI+VG ++ ++Y +
Sbjct: 363 VLARITLWGSLYVAAICVLPMVL---ISQFNVPFYFGGTALLIVVGVAMDFMGKIESYMI 419
>gi|254449308|ref|ZP_05062753.1| preprotein translocase, SecY subunit [gamma proteobacterium
HTCC5015]
gi|198261067|gb|EDY85367.1| preprotein translocase, SecY subunit [gamma proteobacterium
HTCC5015]
Length = 449
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 208/439 (47%), Gaps = 29/439 (6%)
Query: 11 RLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV 70
R +N A +E+R R+ ++I R+G +I +PG + R++ D SG +
Sbjct: 3 RPGGQMNPTANLGQLTEVRNRILFLLFALLIYRVGTYITVPGINPRVM-ADLFESQSGGI 61
Query: 71 DELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 127
+ D GA ++S F LG+ P I ASI++Q++ H+ P V+LRKEG G K+ Y
Sbjct: 62 LGMVDVFAGGALGRMSLFALGVMPYITASIIIQMMGHVHPPFVELRKEGQQGQRKLTQYT 121
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAAS----HSVKHVMVTAFLLVCGAMTMSWICDTIS 183
++++ A +++V ++ + S + V LV G M + W+ + I+
Sbjct: 122 RYLTVLLATVQSVGISVALQNPEVAGPSLVTNPGISFVFTATITLVTGTMFLMWLGEQIT 181
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 243
E G G G S++I GI+ G + + +L +P +LG+L V +VT + +V+
Sbjct: 182 ERGIGNGISMLIFAGIVAGLPTAIANVF-ELTSEGQMSYPLLLGVLVVAALVTYFVIVME 240
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
G R++ + + K R+ + + ++P +N +G+ P + ++ FP +AS
Sbjct: 241 RGQRRITINFA--KRQQGRRQYAAHSS---HLPLKLNAAGVIPAIFAQAIILFPGTIASF 295
Query: 304 LG----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFN--IFDIANLPKEIADYLN 357
G + + + L P A +Y FF F + +F+ ++ AD L
Sbjct: 296 AGNSGPTSWIRDAAAFLAPGQP--AHMIIYGAAIIFFCFFYTALVFN----ARDTADNLK 349
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K GA IP ++PG+ T Y+ + G L ++ + +L + N F+ G T
Sbjct: 350 KQGAFIPGIRPGEQTARYIDGVMTRLTVVGSLYITAVCLLPQVL---ISEFNVPFNFGGT 406
Query: 418 SVLIIVGSIIELRRSYQAY 436
++LI+V +++ QA+
Sbjct: 407 ALLIVVVVVMDFMAQLQAH 425
>gi|408529909|emb|CCK28083.1| Preprotein translocase subunit secY [Streptomyces davawensis JCM
4913]
Length = 437
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 212/439 (48%), Gaps = 32/439 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDE 72
+L A +F ++R++L T +IV+ R+G IP+PG D + Q D + G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVVYRVGTHIPIPGVDYTSVQQCVDEAAGNQGLFGL 60
Query: 73 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ F GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNMFSGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYL 120
Query: 131 SLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDT 181
++ AIL+ + + ++++ S+ + + G + W+ +
Sbjct: 121 TVALAILQGTGLVATARSGALFSGCTVAGQIVPDRSIFVTITMVITMTAGTAVVMWLGEL 180
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW-PFMLGLLGVFTIVTMWAV 240
I++ G G G S+++ + I + L+ + +Q G+ W F +L F +V + V
Sbjct: 181 ITDRGVGNGMSILMFISIAATFPSALWAIKTQ--GTLADGWIEFSTVMLVGFVMVGL-VV 237
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 292
Query: 301 ASIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYL 356
A G+ W K + G P +Y T+Y + F F +A N P+E+AD +
Sbjct: 293 AQFSDGTSSW---KTWIEANLVTGEHP-IYITMYFLLIVFFAFFYVAISFN-PEEVADNM 347
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++ G+ T EYL+ + + G L L ++A TI N+ F G
Sbjct: 348 KKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTIALAGFGA-NQNFPFGG 406
Query: 417 TSVLIIVGSIIELRRSYQA 435
TS+LIIVG +E + ++
Sbjct: 407 TSILIIVGVGLETVKQIES 425
>gi|333896208|ref|YP_004470082.1| preprotein translocase subunit SecY [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111473|gb|AEF16410.1| preprotein translocase, SecY subunit [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 418
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 211/444 (47%), Gaps = 37/444 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFV 66
+LN+ ++ ++IR+++ T +++++ R+G IP+PG D I + +
Sbjct: 1 MLNSLVNAWKVADIRKKIIYTVLMLLVFRLGSHIPVPGIDPNQIKNILGQGTLFGFFDII 60
Query: 67 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 126
SG GA + F + I P I ASI+MQ+L +PSL Q+ KEG +G +KI Y
Sbjct: 61 SG--------GAFRDFTIFAMSIIPYINASIIMQLLTIAIPSLEQMAKEGEEGRKKIAQY 112
Query: 127 IWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
++++ A+++A+ ++ + ++ + L G + W+ + I+E+G
Sbjct: 113 TRYMTVVLALIQAI---GMTIGLRSAVIQPNFLNLTIIVLTLTAGTSFLMWLGERITENG 169
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G GSSLII GIL +Y + Q +G+ + L V ++ + ++++EG
Sbjct: 170 VGNGSSLIIFAGILARIPNMVYTTV-QYVGAGTANIFGAIAFLIVILVMVVSIILMSEGQ 228
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-G 305
R++ +QY A +IP IN +G+ P++ LL FP +A+
Sbjct: 229 RRIPVQY-----AKRVVGRKVYGGQSTHIPIRINMAGVIPLIFALSLLQFPQQIATFFPK 283
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARI 363
S F+ ++ L G W+Y + + F F A + P EI+D + K G I
Sbjct: 284 SAFYAFTEKWL------GTNGWIYNILNVLLIIFFTYFYTAIIFNPIEISDNMKKYGGFI 337
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PGK T +++T++ F G + L+++A I+ + G T++LI V
Sbjct: 338 PGIRPGKPTTDFITRVMNRVTFVGSIFLALVAVLPVIM---MNATGLQLYFGGTALLIAV 394
Query: 424 GSIIELRRSYQAYNVMPSLSKALR 447
G +E + + +M + LR
Sbjct: 395 GVALETMKQIEGQLIMRNYQGFLR 418
>gi|329942429|ref|ZP_08291239.1| preprotein translocase subunit secY [Chlamydophila psittaci Cal10]
gi|332287070|ref|YP_004421971.1| preprotein translocase subunit [Chlamydophila psittaci 6BC]
gi|384450209|ref|YP_005662809.1| preprotein translocase subunit SecY [Chlamydophila psittaci 6BC]
gi|384451217|ref|YP_005663815.1| preprotein translocase subunit [Chlamydophila psittaci 01DC11]
gi|384452193|ref|YP_005664790.1| preprotein translocase subunit SecY [Chlamydophila psittaci 08DC60]
gi|384453167|ref|YP_005665763.1| preprotein translocase subunit [Chlamydophila psittaci C19/98]
gi|384454145|ref|YP_005666740.1| preprotein translocase subunit [Chlamydophila psittaci 02DC15]
gi|392376323|ref|YP_004064101.1| putative preprotein translocase SecY subunit [Chlamydophila
psittaci RD1]
gi|406591928|ref|YP_006739108.1| preprotein translocase subunit secY [Chlamydia psittaci CP3]
gi|406593039|ref|YP_006740218.1| preprotein translocase subunit secY [Chlamydia psittaci NJ1]
gi|406594114|ref|YP_006741262.1| preprotein translocase subunit secY [Chlamydia psittaci MN]
gi|407453598|ref|YP_006732706.1| preprotein translocase subunit secY [Chlamydia psittaci 84/55]
gi|407456296|ref|YP_006734869.1| preprotein translocase subunit secY [Chlamydia psittaci VS225]
gi|410858098|ref|YP_006974038.1| putative preprotein translocase SecY subunit [Chlamydia psittaci
01DC12]
gi|313847666|emb|CBY16654.1| putative preprotein translocase SecY subunit [Chlamydophila
psittaci RD1]
gi|325506686|gb|ADZ18324.1| preprotein translocase subunit [Chlamydophila psittaci 6BC]
gi|328815339|gb|EGF85327.1| preprotein translocase subunit secY [Chlamydophila psittaci Cal10]
gi|328914303|gb|AEB55136.1| preprotein translocase, SecY subunit [Chlamydophila psittaci 6BC]
gi|334691948|gb|AEG85167.1| preprotein translocase subunit [Chlamydophila psittaci C19/98]
gi|334692927|gb|AEG86145.1| preprotein translocase subunit [Chlamydophila psittaci 01DC11]
gi|334693902|gb|AEG87119.1| preprotein translocase subunit [Chlamydophila psittaci 02DC15]
gi|334694882|gb|AEG88098.1| preprotein translocase, SecY subunit [Chlamydophila psittaci
08DC60]
gi|405780357|gb|AFS19107.1| preprotein translocase subunit secY [Chlamydia psittaci 84/55]
gi|405782546|gb|AFS21294.1| preprotein translocase subunit secY [Chlamydia psittaci MN]
gi|405783557|gb|AFS22304.1| preprotein translocase subunit secY [Chlamydia psittaci VS225]
gi|405787800|gb|AFS26543.1| preprotein translocase subunit secY [Chlamydia psittaci CP3]
gi|405788911|gb|AFS27653.1| preprotein translocase subunit secY [Chlamydia psittaci NJ1]
gi|410810993|emb|CCO01636.1| putative preprotein translocase SecY subunit [Chlamydia psittaci
01DC12]
Length = 457
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 221/456 (48%), Gaps = 39/456 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 76
+ F +E+R++LF T L+ RIG FIP+PG + + + S + +L D
Sbjct: 6 QIFSIAELRQKLFFTFALLAACRIGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +PS+ + +E D G KI ++G
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLLVFMPSIQREMRESPDQGKRKIGRLTRLFTVGL 125
Query: 135 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A ++L P + S K + T ++ G + + WI +
Sbjct: 126 AFIQSLLFAKFALKMNMAIPGIVLPTLLSSKLFGAPWIFYLTTVIVMTTGTLLLMWIGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 237
IS+ G G G SLII +GIL + L ++++L LGS S +L L +F V +
Sbjct: 186 ISDKGIGNGVSLIISLGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCLIFVFVLV 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
+++ EG RK+ +QY + RE I Y+P +N +G+ PV+ + LL FP
Sbjct: 246 TTILIIEGVRKIPVQYA--RRVIGRRE---IPGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 298 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIA 353
+ + + S + + V +L+P + WVY + Y + F F A P++IA
Sbjct: 301 ATIGQFMSSDSSWLKRVAMMLSPGS------WVYSSCYVLLIIFFTYFWTATQFHPEQIA 354
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGF 412
+ K A IP ++ GK T YL G + L+++A +IL L N +
Sbjct: 355 SEMKKNNAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVIAILPSILGRVLNVDANVSY 414
Query: 413 SIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+G T++LI+VG +++ + A+ +M L++
Sbjct: 415 FLGGTAMLIVVGVVLDTMKQVDAFLLMRRYDSFLKK 450
>gi|392404103|ref|YP_006440715.1| protein translocase subunit secY/sec61 alpha [Turneriella parva DSM
21527]
gi|390612057|gb|AFM13209.1| protein translocase subunit secY/sec61 alpha [Turneriella parva DSM
21527]
Length = 458
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 215/446 (48%), Gaps = 54/446 (12%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-ELGDF------GAE 79
++R+++ T ++++ RIG I +PG D R++ QDY S +G L D+ GA
Sbjct: 13 DLRKKILFTLGMLLLFRIGAHITVPGLDFRVL-QDYFSKAAGGQSGNLTDYIDLFAGGAF 71
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+LS F LGI P I ASI+MQ++ VPSL +L KEG G KI Y + ++ L+A
Sbjct: 72 KRLSVFALGIMPYISASIIMQIMMVAVPSLQRLAKEGDFGRRKINQYTRYGTVLLCALQA 131
Query: 140 VIVACY--SLPYSIYAASHSV--------KHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+ Y SL + + + +T + G + + W+ + ++E G G
Sbjct: 132 YGITVYITSLHFEALQGNKGMLIPGGPGAGFTAMTILTITAGTILLMWMGELMTERGIGN 191
Query: 190 GSSLIICVGILTGYTETLYKMLSQLL-GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
G+SLII GI+ G L + L + G F+ LL +F + +++++EG RK
Sbjct: 192 GTSLIIFAGIIAGAPAALGQFLGDIRNGQGEPILAFI--LLVLFIAMISMSILLSEGQRK 249
Query: 249 VKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
+ LQY G ++ A + PI +N + + P++ + L+ FPS +AS
Sbjct: 250 IPLQYGKRIVGRRMVQGASQTLPI---------KVNAANVMPIIFASSLMIFPSQIASYF 300
Query: 305 GS---PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKM 359
GS F + +++ L P T Y+ IY + F F I PKEIA+ L K
Sbjct: 301 GSRYQGFAETIQKYLAPGT------MTYFIIYILLILFFAYFYTTIQYNPKEIAEALKKN 354
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI------LDHYLRRINEGFS 413
G IP V+PG T E L +I G + L+ +A + I L+ Y + I+
Sbjct: 355 GGYIPGVRPGAHTEETLERILNRITLSGAIFLAFVAIAPDIFIKIWSLEKYSQLIH---L 411
Query: 414 IGFTSVLIIVGSIIELRRSYQAYNVM 439
G TS+LI VG ++ + ++ VM
Sbjct: 412 FGGTSLLITVGVALDTLKQIESQLVM 437
>gi|407457665|ref|YP_006735970.1| preprotein translocase subunit secY [Chlamydia psittaci WS/RT/E30]
gi|405784560|gb|AFS23306.1| preprotein translocase subunit secY [Chlamydia psittaci WS/RT/E30]
Length = 457
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 218/451 (48%), Gaps = 39/451 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF---GAEL 80
+E+R++LF T L+ RIG FIP+PG + + + S + +L D GA
Sbjct: 11 AELRQKLFFTFALLAACRIGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFSGGAFA 70
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEA 139
+++ LG+ P I ASI++Q+L +PS+ + +E D G KI ++G A +++
Sbjct: 71 QMTVIALGVVPYISASIIVQLLLVFMPSIQREMRESPDQGKRKIGRLTRLFTVGLAFIQS 130
Query: 140 VIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDTISESG 186
++ A ++L P + S K + T ++ G + + WI + IS+ G
Sbjct: 131 LLFAKFALKMNMAIPGIVLPTLLSSKLFGAPWIFYLTTVIVMTTGTLLLMWIGEQISDKG 190
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTMWAVVV 242
G G SLII +GIL + L ++++L LGS S +L L +F V + +++
Sbjct: 191 IGNGVSLIISLGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCLIFVFVLVTTILI 250
Query: 243 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
EG RK+ +QY + RE I Y+P +N +G+ PV+ + LL FP+ +
Sbjct: 251 IEGVRKIPVQYA--RRVIGRRE---IPGGGSYLPLKVNYAGVIPVIFASSLLMFPATIGQ 305
Query: 303 ILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNK 358
+ S + + V +L+P + WVY + Y + F F A P++IA + K
Sbjct: 306 FMSSDSSWLKRVAMMLSPGS------WVYSSCYVLLIIFFTYFWTATQFHPEQIASEMKK 359
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFT 417
A IP ++ GK T YL G + L+++A +IL L N + G T
Sbjct: 360 NNAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVIAILPSILGRVLNVDTNVSYFFGGT 419
Query: 418 SVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
++LI+VG +++ + A+ +M L++
Sbjct: 420 AMLIVVGVVLDTMKQVDAFLLMRRYDSFLKK 450
>gi|304315960|ref|YP_003851105.1| preprotein translocase subunit SecY [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433654119|ref|YP_007297827.1| preprotein translocase, SecY subunit [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302777462|gb|ADL68021.1| preprotein translocase, SecY subunit [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433292308|gb|AGB18130.1| preprotein translocase, SecY subunit [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 418
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 208/435 (47%), Gaps = 41/435 (9%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFVSGSVDELGDFG 77
++IR+++ T +++++ R+G IP+PG D I + +SG G
Sbjct: 12 ADIRKKIIYTVLMLLVFRLGSHIPVPGIDPNQIKNILGQGTLFGFFDIISG--------G 63
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
A + F + I P I ASI+MQ+L +PSL Q+ KEG +G +KI Y ++++ A++
Sbjct: 64 AFRDFTIFAMSIVPYINASIIMQLLTIAIPSLEQMAKEGEEGRKKIAQYTRYMTVVLALI 123
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+A+ ++ + + ++ + L G + W+ + I+E+G G GSSLII
Sbjct: 124 QAI---GMTIGLRGAVINPNFLNLTIIVLTLTAGTSFLMWLGERITENGVGNGSSLIIFA 180
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
GIL +Y + Q +G+ + L V ++ + ++++EG R++ +QY
Sbjct: 181 GILARIPNMIYTTI-QYVGAGTANIFGAIAFLIVILVMVVSIILMSEGQRRIPVQY---- 235
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEIL 316
A +IP IN +G+ P++ LL FP +A+ S F+ ++ L
Sbjct: 236 -AKRVVGRKVYGGQSTHIPLRINMAGVIPLIFALSLLQFPQQIATFFPKSAFYAFTEKWL 294
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
G W+Y + + F F A + P EI+D + K G IP ++PGK T +
Sbjct: 295 ------GTNGWIYNVLNVLLIIFFTYFYTAIIFNPVEISDNMKKYGGFIPGIRPGKPTTD 348
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRS 432
++T++ F G + L+++A I+ + G + G T++LI VG +E +
Sbjct: 349 FITRVMNRVTFVGSIFLAVVAVLPVIMMNV-----TGLQLYFGGTALLIAVGVALETMKQ 403
Query: 433 YQAYNVMPSLSKALR 447
+ +M + LR
Sbjct: 404 IEGQLIMRNYQGFLR 418
>gi|315925236|ref|ZP_07921450.1| preprotein translocase subunit SecY [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315621470|gb|EFV01437.1| preprotein translocase subunit SecY [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 419
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 216/429 (50%), Gaps = 30/429 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP---QDYLSFVSGSVDELGDFGAELKLS 83
E+RR++ +T +L+++ R+G FIP+P D + + D F ++ G+FG +
Sbjct: 13 ELRRKIVMTLLLLLVYRLGSFIPVPYIDSQQLASLINDGGIFGLFNIISGGNFG---NFT 69
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F +GI+P I ASI+M +L +P+L L+KEG +G +K+ Y ++++ AI++A+
Sbjct: 70 IFAMGITPYINASIIMNLLAFAIPALEALQKEGEEGRKKLAQYTRYLTIILAIVQAL--- 126
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
SL Y + + ++ G + + ++ + I+E G G G SLII + I++
Sbjct: 127 GMSLSYRNLLVEKTAFTIFAVVLIVTAGTIFLMYLGEKITEIGIGNGVSLIIFISIVSRI 186
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFKLASAA 262
+ + + + ++ +L L +F I +AVV VTEG RK+ +QY A
Sbjct: 187 PDAVGSIYQYVQNGTMNAVSLIL--LVIFIIAATFAVVAVTEGQRKIPIQY-----AKRV 239
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEIL---NP 318
+IP +N +G+ P++ + L P+ LA+ S F Q V + P
Sbjct: 240 VGRKMYGGQNTHIPLRVNMAGVIPIIFASSLTLLPATLANFFPNSGFSQWVSKYFAWGQP 299
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTK 378
T+V +Y + F + + P +IAD + K G +P ++PGK T++Y T+
Sbjct: 300 TTTV-----IYVILTVAFTYFYTAVTFN--PFDIADNIKKQGGYVPGIRPGKPTVDYFTR 352
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNV 438
I +GG+ L+I+A I+ +++ +N F G TS+LI+VG +E + ++
Sbjct: 353 IMNRLTLFGGIFLAIIAIIPIIVGNFMGGVNMQF--GGTSLLIVVGVALETVKQLESQLT 410
Query: 439 MPSLSKALR 447
M + L+
Sbjct: 411 MRNYQGFLK 419
>gi|258646032|ref|ZP_05733501.1| preprotein translocase, SecY subunit [Dialister invisus DSM 15470]
gi|260403403|gb|EEW96950.1| preprotein translocase, SecY subunit [Dialister invisus DSM 15470]
Length = 420
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 206/423 (48%), Gaps = 31/423 (7%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELK 81
E++ R+ T V+ + R+G IP+PG D ++ F SG++ D GA K
Sbjct: 11 NKELKDRVLFTMVMFFVFRLGVHIPVPGVDTSILES---LFSSGNLFGFLDLFSGGALSK 67
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
S F + I+P I +SI+MQ+L ++P+L + RK+G +G++KI+ + ++ A+++A
Sbjct: 68 FSLFAMSITPYINSSIIMQLLTSVIPTLEEWRKDGQEGYKKIQKVTRYFTIFLAVVQA-F 126
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
Y+L + +S + +L G + WI + I+E G G G SLII GI+
Sbjct: 127 GMTYALRINHALVDNSWLYFGFIIVVLTAGTCLLMWIGEQITEHGIGNGISLIIFCGIVA 186
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFKLAS 260
+ E + ++ L ++ PF L L + + + V+ V EG R+V +QY A
Sbjct: 187 RFPEAISTVIEYLKIGTIS--PFQLLLFVIIALGMILMVIEVNEGQRRVSIQY-----AK 239
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
++P +N +G+ P++ + ++ P LA + H+ + +
Sbjct: 240 RVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSIIMLPVTLAQFV------HIGWVQSVGN 293
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
W Y +F+F F A N+ KE+AD + K G IP ++PG+ T+ Y+
Sbjct: 294 FFAWGSWPNTICYGILIFIFTYFYTAISLNI-KELADNMKKYGGFIPGIRPGEPTMIYID 352
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSVLIIVGSIIELRRSYQA 435
K+ + G L L+ +A IL +++ I +G G TS+LI+VG ++ R Q+
Sbjct: 353 KVMSRITLAGALFLAFIA----ILPNFIGNITGIQGVYFGGTSLLIVVGVALDTMRQAQS 408
Query: 436 YNV 438
V
Sbjct: 409 LMV 411
>gi|219666510|ref|YP_002456945.1| preprotein translocase subunit SecY [Desulfitobacterium hafniense
DCB-2]
gi|219536770|gb|ACL18509.1| preprotein translocase, SecY subunit [Desulfitobacterium hafniense
DCB-2]
Length = 429
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 214/439 (48%), Gaps = 54/439 (12%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 80
EIR ++ T ++ +I RIG IP+P I D LS + GS L DF G+
Sbjct: 14 EIRTKIGFTLLMFLIFRIGAHIPIP-----FINHDILSNILGS-GTLYDFLDTFSGGSFR 67
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY----------IWWI 130
+ S F L I+P I ASI++Q+L ++PSL +L KEG G +KI Y I
Sbjct: 68 RFSVFALSITPYITASIILQLLTIVIPSLERLAKEGEFGRKKITQYTRYGTVILGFIQGF 127
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
+ F + A+I+ + ++IY ++ A +L G + W+ + I+E+G G G
Sbjct: 128 GMTFGLRGALIIPKPGMEWAIY---------LLVALILTAGTAFLMWLGERITENGIGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SLII GI+ G + + ++ L + + + GL+ + + V + EG R+++
Sbjct: 179 ISLIIFAGIVAGVPDAIKRIAGLLSVGEINVFS-VFGLIVIGLGIIAGVVFIQEGQRRIQ 237
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--SPF 308
+QY A +IP +N +G+ P++ LLAFPS +A+ + S +
Sbjct: 238 VQY-----AKRVVGRRVYGGQSSHIPMKVNQAGVIPIIFAISLLAFPSTIATWMDPTSAY 292
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNV 366
+ V S+ + P Y +YA + F F ++ P ++AD L K G IP +
Sbjct: 293 VRFVNTWFVMNGSLTSIP--YLIVYAVLIIFFTYFYTAVSFNPVDVADNLKKYGGFIPGL 350
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PG+AT +YL+KI + GG L+++A +++ N ++G TS+LI+V
Sbjct: 351 RPGRATSDYLSKILSRLTLAGGTFLAMIAVLPSLVIGLTGIPN--ITLGGTSLLIVVSVA 408
Query: 427 IE---------LRRSYQAY 436
+E ++R YQ +
Sbjct: 409 LETMKQLESMLMQRHYQGF 427
>gi|410867064|ref|YP_006981675.1| Preprotein translocase, SecY subunit [Propionibacterium
acidipropionici ATCC 4875]
gi|410823705|gb|AFV90320.1| Preprotein translocase, SecY subunit [Propionibacterium
acidipropionici ATCC 4875]
Length = 441
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 218/449 (48%), Gaps = 38/449 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSG-- 68
+L+ A +F ++R+++F T ++VI R+G IP+P D R + Q S +G
Sbjct: 1 MLHAFASAFKTPDLRKKIFFTLFILVIFRLGSTIPVPNVDVAKIDRCVAQSQTSSAAGLY 60
Query: 69 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
S+ L GA L+L+ F LGI P I +SI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SMINLFSGGALLQLAIFALGIMPYITSSIILQLLTVVIPKLEALKKEGASGQNKITQYTR 120
Query: 129 WISLGFAILEAVIVACYSLPYSIYAA--------SHSVKHVMVTAFLLVCGAMTMSWICD 180
+++L +L+A + ++ S+ ++V + G + W+ +
Sbjct: 121 YLTLVLGVLQATAFVTLATSGQLFRTCSDPIVVNDTSIFPIIVMVLTMTAGTTIVMWMGE 180
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLS--QLLGSSVRWWPFMLGLLGVFTIVTMW 238
I++ G G G S++I I + ++L+++ + + G + W+ F+L ++ V +V
Sbjct: 181 LITDRGVGNGMSILIFTQIAARFPDSLWQIKTSREGQGQAHAWFIFLL-VIAVGLLVMAA 239
Query: 239 AVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 298
V + +G R++ +QY A YIP +N SG+ PV+ + +L P
Sbjct: 240 VVFIEQGQRRIPVQY-----AKRMVGRRMFGGTSTYIPLKVNQSGVIPVIFASSILYLPV 294
Query: 299 ILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYL 356
+ A+ P + + I + + G P VY +Y + F F +A P E++D +
Sbjct: 295 LYATF--RPDGKAAQWI-SANFTRGDHP-VYNIVYFLLIVFFCYFYVAITFDPVEMSDNM 350
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++ GK T +YL + + G L L +++ T+ +L N+ F G
Sbjct: 351 KKYGGFIPGIRAGKPTEDYLAYVLSRLTAPGSLYLGLISLIPTLAFVFLNA-NQNFPFGG 409
Query: 417 TSVLIIVGSIIEL---------RRSYQAY 436
TS+LI+VG ++ +RSY+ +
Sbjct: 410 TSILIVVGVGLDTIKQIESKLQQRSYEGF 438
>gi|326792587|ref|YP_004310408.1| preprotein translocase subunit SecY [Clostridium lentocellum DSM
5427]
gi|326543351|gb|ADZ85210.1| preprotein translocase, SecY subunit [Clostridium lentocellum DSM
5427]
Length = 422
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 199/422 (47%), Gaps = 30/422 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV-SGSVDELGDF---GAELKL 82
E+R +L T + + RIG I +PG DR + + SG V++ GA L
Sbjct: 15 ELRNKLIYTLWMFLFIRIGVSITVPGVDRAALAAANAANANSGFVNQFMSMITGGANQDL 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
+ F LG+ P I ASI+MQ+L + L +L KEG +G +KI Y +++LG A++++
Sbjct: 75 ALFALGVGPYITASIIMQLLQVAISKLEELAKEGEEGRKKINKYTRYVTLGLAVVQS--- 131
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
L S+ ++ + G+M + WI + I+ G G G SL I +GI+
Sbjct: 132 WAMVLTNRNVLVDDSIWTFLLVMIAFIAGSMLVMWIGEQITSKGVGNGMSLYIFIGIIYS 191
Query: 203 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
+ +L + P + +L F + + V++ +G R+V +QY A
Sbjct: 192 LPTNFAGIF--VLNKDRIYIPII--VLIAFIALVGFTVLMAQGERRVSVQY-----AKRM 242
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---SPFWQHVKEILNPE 319
YIP +N G+ P++ ++ FP I+ +++G S WQ V LN
Sbjct: 243 AGRKVYGGQSQYIPVKVNLGGVLPIIFAMSIMNFPQIIINLVGAQVSENWQTVLNWLNWT 302
Query: 320 TSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
VG+ IY +F F F IA P EIA + K G +P ++PGK T +YL
Sbjct: 303 NPVGS------VIYIILIFAFAFFYSTIAFNPMEIASNMKKSGGFVPGIRPGKPTSDYLA 356
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYN 437
+ G + L ILA + YL +++ FS TS+LI+VG ++E + ++
Sbjct: 357 ALGTRITLLGAIFLVILAIMPLAFN-YLFKVDVAFS--GTSLLIVVGVVLETLKQIESQM 413
Query: 438 VM 439
+M
Sbjct: 414 LM 415
>gi|340758483|ref|ZP_08695069.1| preprotein translocase, SecY subunit [Fusobacterium varium ATCC
27725]
gi|251836736|gb|EES65270.1| preprotein translocase, SecY subunit [Fusobacterium varium ATCC
27725]
Length = 426
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 204/423 (48%), Gaps = 32/423 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 81
E+R R+ T ++ +++R+G +IP PG D D L+ ++ D LG GA +
Sbjct: 19 ELRDRIIFTLIMFLVARVGTYIPAPGIDV-----DRLATMTAQSDILGYINMFSGGAFKR 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI+ +L I+P + +++K+G G KI + ++++ AI++
Sbjct: 74 VSIFALGIVPYINASIVFSLLAVIIPKIEEIQKDGEAGRNKINQWTRYLTIAIAIVQGFG 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V C L + + + T L G + + WI + IS G G G SL+I + +++
Sbjct: 134 V-CMWLQSVGLVTTPGILFFLTTVVTLTAGTVFLMWIGEQISIKGIGNGVSLLIFLNVIS 192
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY--GFKLA 259
G ++ + + + GS P ++ + G I V+ G RK+ + Y GF
Sbjct: 193 GGPSSVVQTIQTMKGSKF-LIPVLILIAGAAVITVAGIVIFQLGQRKIPIHYVGKGFSGK 251
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 319
++S YIP +N +G+ PV+ + ++ PS++ + + S + K L
Sbjct: 252 GGMGQNS-------YIPLKLNSAGVMPVIFASVVMMIPSVIINAIPSQY--TFKTTLAMV 302
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLT 377
S + VY IYA + F+ F A + P+++AD L + G IP ++PG T+EYL
Sbjct: 303 FS--QKHPVYMIIYAIVIIFFSFFYTAIVFDPEKVADNLKQGGGTIPGIRPGNETVEYLE 360
Query: 378 KIQASTRF-WGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ TR WGG LA S + N G T ++I+VG I+ + A+
Sbjct: 361 GV--VTRITWGGAFF--LAIISILPYTIFTAFNLPVFFGGTGIIIVVGVAIDTVQQINAH 416
Query: 437 NVM 439
VM
Sbjct: 417 LVM 419
>gi|374988965|ref|YP_004964460.1| preprotein translocase subunit SecY [Streptomyces bingchenggensis
BCW-1]
gi|297159617|gb|ADI09329.1| preprotein translocase subunit SecY [Streptomyces bingchenggensis
BCW-1]
Length = 437
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 213/444 (47%), Gaps = 42/444 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T +IV+ R+G IP+PG + Q+ + + + + G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVLFRLGQHIPIPGINY----QNVQTCIDQAKGQQG 56
Query: 75 DFG--------AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 126
FG A L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 57 LFGLVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGQAKITQY 116
Query: 127 IWWISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSW 177
++++ AIL+ + + ++ A ++ +V + G + W
Sbjct: 117 TRYLTVALAILQGTGLVATARSGQLFQACDVGNQIVKDDAIFTTVVMVITMTAGTALIMW 176
Query: 178 ICDTISESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIV 235
+ + +++ G G G S+++ V I G+ ++ K +++G W F L +L +V
Sbjct: 177 LGELVTDRGIGNGMSILMFVSIAAGFPSAMWTIKQQGKIMGG---WLEFGLVVLCGLVMV 233
Query: 236 TMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLA 295
+ V V + R++ +QY + + + YIP +N +G+ PV+ + LL
Sbjct: 234 GL-VVFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPMKVNQAGVIPVIFASSLLY 287
Query: 296 FPSILASILGSPF-WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKE 351
P+++ GS W E G P+ Y T Y + F F +A N P+E
Sbjct: 288 IPALIVQFSGSKAGWATWIE---TNFVRGDHPY-YITTYFLLIVFFAFFYVAISFN-PEE 342
Query: 352 IADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEG 411
+AD + K G IP ++ G+ T EYL+ + + G L L ++A T+ L+ N+
Sbjct: 343 VADNMKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTVALVTLKA-NQN 401
Query: 412 FSIGFTSVLIIVGSIIELRRSYQA 435
F G TS+LIIVG +E + ++
Sbjct: 402 FPFGGTSILIIVGVGLETVKQIES 425
>gi|12643627|sp|O63066.1|SECY_MAIZE RecName: Full=Preprotein translocase subunit SECY, chloroplastic;
AltName: Full=CpSecY; Flags: Precursor
gi|2934902|gb|AAC05019.1| cpSecY [Zea mays]
Length = 553
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 203/420 (48%), Gaps = 26/420 (6%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAE 79
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 134 DFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLL-GTLDSFSGGGIG 192
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILE 138
+L LGI P I A I+ Q+L + P L L RKEG G +K+ Y + S+GFAI++
Sbjct: 193 -RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAIVQ 251
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL+I
Sbjct: 252 AIGQVLYLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTS 308
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I++ + + ++Q + +L ++ F ++ + V V E RK+ L Y
Sbjct: 309 IISYLPASFGRTVAQAFQDG--NYVGLLTIILSFLLLVLGIVYVQEAERKIPLNY----- 361
Query: 259 ASAAREDSPITEVE--PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
A+R S E++ Y+PF +N SG+ P++ +T LA P LA G F + L
Sbjct: 362 --ASRYSSRTGELQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKKAAIAL 419
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
NP ++ V + AFF + + + P ++++ L + GA IP V+PGK+T Y+
Sbjct: 420 NPGGALYLPTNVL--LIAFFNYYYTFLQLD--PDDLSEQLKRQGASIPLVRPGKSTAAYI 475
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELRRSYQA 435
+ G L++LA ++++ GF+ TSVLI+VG + R QA
Sbjct: 476 KTVLNRISVLGSAFLAVLAAGPSLVEQTSHLTAFRGFA--GTSVLILVGCATDTARKVQA 533
>gi|427703087|ref|YP_007046309.1| preprotein translocase subunit SecY [Cyanobium gracile PCC 6307]
gi|427346255|gb|AFY28968.1| preprotein translocase, SecY subunit [Cyanobium gracile PCC 6307]
Length = 439
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 205/400 (51%), Gaps = 25/400 (6%)
Query: 47 FIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQLGISPQIVASILMQVLCH 104
+IP+PG DR QD++ + L F G L F LGI P I ASI++Q++
Sbjct: 43 YIPVPGIDRVAF-QDFIRQGGQLIGFLDIFTGGGLSTLGVFALGILPFINASIIIQLMTA 101
Query: 105 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 163
+P L +L+K EG G K+ +++LG+ IL++++ A Y++ + V+
Sbjct: 102 ALPQLEELQKNEGEAGRRKLAQITRYVALGWGILQSIVFALILRQYALPGLPEWL-FVVQ 160
Query: 164 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP 223
T+ LV G+M + WI + I+E G GQG+SL+I + I+ + L + QL S R
Sbjct: 161 TSLALVTGSMVVMWISEVITERGIGQGASLVIFINIVATLPKALGSTI-QLAQSGDRATV 219
Query: 224 FMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFKLASAARE---DSPITEVEPYIPFNI 279
+ +L + +VT+ +++ + EG R++ + SA R+ S + + Y+P +
Sbjct: 220 GGIVVLVLVFLVTIVSIIFLQEGSRRI-------PIVSAKRQVGGASTLASRQSYLPLKL 272
Query: 280 NPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFL 339
N G+ P++ + ++ P +A++ SP+ V LNP +S PW+Y +Y +
Sbjct: 273 NAGGVMPIIFASAVVFLPLTIANLTKSPWLIRVAGYLNPTSST---PWLYALVYFALICG 329
Query: 340 FNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATS 397
F F + P +IA L + G IP V+PG AT +YL+ + GG+ L +A
Sbjct: 330 FAFFYASLTVNPVDIATNLKRSGVAIPGVRPGSATADYLSGVSNRLTLLGGVFLGAIAII 389
Query: 398 STILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ ++ + R +G +G TS+LI+VG I+ + Q Y
Sbjct: 390 PSAVEGATQVRTFQG--LGATSLLILVGVAIDTAKQVQTY 427
>gi|167748450|ref|ZP_02420577.1| hypothetical protein ANACAC_03194 [Anaerostipes caccae DSM 14662]
gi|317472017|ref|ZP_07931349.1| preprotein translocase [Anaerostipes sp. 3_2_56FAA]
gi|167652442|gb|EDR96571.1| preprotein translocase, SecY subunit [Anaerostipes caccae DSM
14662]
gi|316900421|gb|EFV22403.1| preprotein translocase [Anaerostipes sp. 3_2_56FAA]
Length = 438
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 217/442 (49%), Gaps = 42/442 (9%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
N +F E+R++L T +++++ R G +P+PG D + S + S + L F
Sbjct: 3 NALTNAFKNKELRKKLAFTVIILIVVRFGSQLPIPGIDTAQVTAYLKSTLGDSFNLLNSF 62
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
G+ L++S F L ++P I +SI+MQ++ +P+L +++K+G DG +KI ++++
Sbjct: 63 TGGSFLQMSVFALSVTPYITSSIIMQLMTIAIPALEEMQKDGEDGRKKIAKITRYVTVVL 122
Query: 135 AILEAVIVACYSLPYSIYAA---SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
++E+ A ++ +S A H+ ++ L GA+ + W+ + I+E+G G G
Sbjct: 123 GLIES---AGMTIGFSRSGALGPEHTNFTIVTMIIALTAGAILVMWLGERITENGIGNGI 179
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRKV 249
S+I+ + I++G + Y + +Q + + G + V ++ +++++ R +
Sbjct: 180 SIILLINIVSGMPKDFYALYNQFMKGKQIGPALIAGCVIAAVVLFTVVFVIILSDAERHI 239
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI------ 303
+QY + + + +IP +N +G+ P++ + ++ FP I+ +
Sbjct: 240 PVQY-----SKKVQGRKMVGGQSSHIPLKVNTAGVIPIIFASSIMQFPLIIQQLFKYESN 294
Query: 304 ---------LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIAD 354
L S W +P+ S+G +Y + F + + I P EI++
Sbjct: 295 GFMGKVLHSLSSSTWFDAN---HPKRSLGL--LIYIVLVVIFAYFYT--SITFNPLEISN 347
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFS 413
+ K G +P ++PGK T++YL KI F G L+I+A ++ + + + S
Sbjct: 348 NMKKQGGFVPGIRPGKPTVDYLNKILKYIIFIGAAGLTIVA----VIPFFFNGVFSAQVS 403
Query: 414 IGFTSVLIIVGSIIELRRSYQA 435
G TS++I+VG I+E + ++
Sbjct: 404 FGGTSIIIVVGVILETIKQIKS 425
>gi|72382949|ref|YP_292304.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
NATL2A]
gi|72002799|gb|AAZ58601.1| protein translocase subunit secY/sec61 alpha [Prochlorococcus
marinus str. NATL2A]
Length = 439
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 204/422 (48%), Gaps = 21/422 (4%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFG 77
F E+R R+F T L++I R+G +IP+PG DR + + +F+ +G G
Sbjct: 19 FSNEELRGRVFTTLGLLLIVRLGIYIPMPGIDR----EAFKTFIDQGGQLIGFLDIFTGG 74
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAI 136
L F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+ +
Sbjct: 75 GISTLGVFALGILPFINASIIIQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWGL 134
Query: 137 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
+++ + A Y++ S + + V+ T+ LV G+M + W+ + I+E G GQG+SL+I
Sbjct: 135 VQSTVFALILRQYAVEGISET-EFVIQTSLALVTGSMIVMWLSEIITEKGIGQGASLVIF 193
Query: 197 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
+ I+ + L + + ++ LL VF I + + V EG R++ +
Sbjct: 194 LNIVATLPKALSSTIEKAQTGDRADVLGIIILLIVFLITIVGIIFVQEGARRIPIVSAKS 253
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
++ A S + Y+P +N G+ P++ + L+ P +A+ +P L
Sbjct: 254 QMGGGALLPSR----QSYLPLKLNAGGVMPIIFASALIFLPITIANFTQNPLLIKAASSL 309
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIE 374
NP +S PW Y + + F F + P +IA L K G IP V+PG AT
Sbjct: 310 NPGSS---NPWPYAITFFALILGFAYFYASLTINPLDIASNLKKGGVAIPGVRPGGATSN 366
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
YL+ +Q GGL L +A ++ + +G TS+LI+VG I+ + Q
Sbjct: 367 YLSGVQNRLTLLGGLFLGSVAIVPAAVERA-TNVQTFQGLGATSLLILVGVAIDTSKQIQ 425
Query: 435 AY 436
Y
Sbjct: 426 TY 427
>gi|260886896|ref|ZP_05898159.1| preprotein translocase, SecY subunit [Selenomonas sputigena ATCC
35185]
gi|330839306|ref|YP_004413886.1| preprotein translocase, SecY subunit [Selenomonas sputigena ATCC
35185]
gi|260863495|gb|EEX77995.1| preprotein translocase, SecY subunit [Selenomonas sputigena ATCC
35185]
gi|329747070|gb|AEC00427.1| preprotein translocase, SecY subunit [Selenomonas sputigena ATCC
35185]
Length = 418
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 204/422 (48%), Gaps = 33/422 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E+R+++ T ++ + R+G IP+PG D I Q F +G++ L D GA K S
Sbjct: 13 ELRQKVIFTLIMFAVFRLGTHIPVPGVDPSAIEQ---LFATGNLFGLLDLFSGGAFSKFS 69
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F + I+P I ASI+MQ+L ++P+L Q KEG +GH+K ++++ A +AV ++
Sbjct: 70 IFAMSITPYINASIIMQLLTVVIPTLEQWSKEGQEGHKKTTKVTRYLTVALAFFQAVGMS 129
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
L +I + S +++ A L G + + WI + I+ +G G G SLII GI+
Sbjct: 130 I-GLKQAIL--NPSPVSILIIAITLTGGTIFLMWIGEQITANGVGNGISLIIFAGIVAAL 186
Query: 204 TETLYKMLSQLLGSSVRWW-PFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
+ L + S L ++ ++ F+ ++ + IV + + + EG R+V + Y +
Sbjct: 187 PKNLGTIYSYLQAGTISYFNAFVFAVIALLMIV--FVIYIQEGNRRVPISYAKRVVGKKT 244
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSV 322
S +IP +N +G+ P++ + +L FP +A + P W T
Sbjct: 245 YGGS-----SSHIPLKVNHAGVIPIIFASSVLMFPVTVAQFIEVP-WV--------TTLA 290
Query: 323 GARPW---VYYTIYAFFVFLFNIFDIANLPK--EIADYLNKMGARIPNVKPGKATIEYLT 377
G W + +IYA + F F A K ++A+ L K G IP ++PGK T EYL
Sbjct: 291 GYFAWGTPLQTSIYALLIIFFTYFYTAVTVKISDMAENLKKYGGFIPGIRPGKPTEEYLD 350
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYN 437
+ G L+ +A ++ EG G T++LI+VG + + ++
Sbjct: 351 TVMTRITLAGAFFLAFIAVLPNLVAGATHI--EGVYFGGTALLIVVGVALNTMKQIESMV 408
Query: 438 VM 439
VM
Sbjct: 409 VM 410
>gi|311111952|ref|YP_003983174.1| preprotein translocase subunit SecY [Rothia dentocariosa ATCC
17931]
gi|310943446|gb|ADP39740.1| preprotein translocase subunit SecY [Rothia dentocariosa ATCC
17931]
Length = 435
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 194/418 (46%), Gaps = 36/418 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF--GAELK 81
+++RR+L T +IV+ R+G FIP PG + Q + G+ D + F GA L+
Sbjct: 12 ADLRRKLLFTLGMIVLYRMGTFIPAPGISYGTVQQCLNANQTHGGAYDIINLFSGGALLQ 71
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
LS F LG+ P I ASI++Q+L ++P +L EG G K+ Y ++++ A+L A
Sbjct: 72 LSIFALGVMPYITASIIIQLLRVVIPRFQELHDEGAQGQAKLTQYTRYLTIALALLNATT 131
Query: 142 VACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+ + + V H++V L G + W+ + I+E G G G SL+I
Sbjct: 132 IVSMARSGVLLGNCPGIIPQDDVLHILVIIITLCAGTGVIMWMGEQITERGVGNGMSLLI 191
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYY 254
I + + L +L Q G V W ++GL M AVV V + R+V +QY
Sbjct: 192 FTSIASSFPNALGSILEQ-QGPFVFWSVCLVGL------AVMLAVVYVEQSVRRVPVQY- 243
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI------LGSPF 308
A I YIP +N +G+ P++ + LL P I+A P
Sbjct: 244 ----AKRMIGRRTIGGTSTYIPLKVNMAGVIPIIFASSLLTLPGIIAQFNTPQGGAAPPE 299
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNV 366
W + +N + G P +Y +Y + F F +A P E+AD + K G IP V
Sbjct: 300 WVN---WVNTYLTRGDHP-LYIALYFLLILGFTYFYVAVTFDPVEVADNMKKYGGFIPGV 355
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
+ GK T YL+ + G L L++++ ++ L N+ F G S+LI+VG
Sbjct: 356 RAGKPTERYLSYVLTRITLPGSLYLAVVSMIP-LVALVLFNANQNFPFGGASLLIVVG 412
>gi|346311567|ref|ZP_08853570.1| preprotein translocase [Collinsella tanakaei YIT 12063]
gi|345900630|gb|EGX70450.1| preprotein translocase [Collinsella tanakaei YIT 12063]
Length = 427
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 208/436 (47%), Gaps = 50/436 (11%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRR----LIPQDYLSFVSGSV 70
+LN +F E+R ++ T ++V+ RIG +P+PG + L S SG++
Sbjct: 1 MLNGLKNTFRIKELRGKILFTIAMLVVYRIGAHVPVPGIPFQGMLGLFQSAGDSVASGAM 60
Query: 71 DELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
L F GA +S F LGI P I SI++Q+L +VPSL L +EG G KI Y
Sbjct: 61 ALLNLFSGGALSYVSVFSLGIMPYITGSIILQMLQSVVPSLHALAREGEVGQTKITQYTR 120
Query: 129 WISLGFAILEAV----IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+++LG AI+ A+ + + + ++ A + +M+ L GAM + WI + I++
Sbjct: 121 YLTLGLAIVNAIGYLFLFKSFGISFNGAGAPGIIFDIMIVG-TLTAGAMLIMWIGELITQ 179
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV--- 241
G G G SLII I+ G + ++ SSV G GV T V ++ ++
Sbjct: 180 RGIGNGMSLIIFANIMAGLPQAIF--------SSVE------GTAGVITTVVIFVIILCV 225
Query: 242 ------VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLA 295
+ G R++ +QY A + Y+P +N +G+ P++ + LL
Sbjct: 226 IPLIVFIERGQRRIPVQY-----AKRVVGRRIMGGQSTYLPIKVNTAGVIPIIFASALLY 280
Query: 296 FPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIA 353
FP+ +A + W ++ + N ++ W+ + + + F F + + P + A
Sbjct: 281 FPAQIAVFFPNIGW--IQTVANAMST----GWINWILNVLLIVFFAYFYTSMVFNPDDTA 334
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGF 412
D L K G IP V+PGKAT Y+ + L+I+A +I+ + ++ + F
Sbjct: 335 DNLKKQGGFIPGVRPGKATANYIKNALNKITLPSAIFLAIIAIVPSIVFSFTGNQLIQAF 394
Query: 413 SIGFTSVLIIVGSIIE 428
G TSVLI+VG +++
Sbjct: 395 --GGTSVLIMVGVVLD 408
>gi|116749010|ref|YP_845697.1| preprotein translocase subunit SecY [Syntrophobacter fumaroxidans
MPOB]
gi|116698074|gb|ABK17262.1| protein translocase subunit secY/sec61 alpha [Syntrophobacter
fumaroxidans MPOB]
Length = 435
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 196/420 (46%), Gaps = 26/420 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E++RR+ VT L+ + R+G IP PG + + + +SG++ L D GA +LS
Sbjct: 13 ELKRRILVTLALLAVYRVGAHIPTPGINGDAL-AAFFKQLSGTLLGLFDMFSGGALSQLS 71
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q+L ++P+L +L KEG G KI Y + ++ ++++ +
Sbjct: 72 VFSLGIMPYISASIILQLLTVVIPTLERLSKEGDAGRRKITQYTRYGTVILSVIQGFAIG 131
Query: 144 CYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+ V H + T L G + W+ + I+E G G G SLII G
Sbjct: 132 VGLEGMTGPGGEIVVLHPGWGFRLTTVLTLTAGTAFIMWLGEQITERGIGNGISLIIFAG 191
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ G L + + + + +LGL V + + G R++ +QY
Sbjct: 192 IVAGIPNALENTVRMVTMGEMSAF-LLLGLAAFMLAVVAVIIFMERGQRRIPVQY----- 245
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
A +IP IN SG+ P + + ++ FP + S + +P+ + + L P
Sbjct: 246 AKRVVGRRVYGGQNTHIPLKINTSGVIPPIFASSIMMFPGTVGSFIKTPWMEWIANALGP 305
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYL 376
W++ +Y + F F A + P ++AD + K G IP ++PG+ T EY+
Sbjct: 306 GQ------WLHSILYVALIVFFCFFYTAIVFNPLDVADNMKKYGGFIPGIRPGRPTAEYI 359
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
K+ + G + +S + TIL + R F G T++LI++G ++ +A+
Sbjct: 360 DKVLSRITVGGAVYISAVCVLPTIL---ISRFAVPFYFGGTALLIVIGVAMDTLAQIEAH 416
>gi|440696631|ref|ZP_20879086.1| preprotein translocase, SecY subunit [Streptomyces turgidiscabies
Car8]
gi|440281139|gb|ELP68800.1| preprotein translocase, SecY subunit [Streptomyces turgidiscabies
Car8]
Length = 438
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 214/439 (48%), Gaps = 31/439 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T +IV+ R+G IP+PG D + + +GS G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVVYRVGTHIPIPGVDYQNVQTCIDVAKNGSQGLFG 60
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 61 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 120
Query: 130 ISLGFAILEAVIVACYSLPYSIYA----ASHSV--KHVMVTAFLLV---CGAMTMSWICD 180
+++ AIL+ + + ++++ AS V + + VT +++ G + W+ +
Sbjct: 121 LTVALAILQGTGLVATARSGALFSGCTVASEIVPDQSIFVTVTMVITMTAGTAMVMWLGE 180
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I++ G G G S+++ + I + L+ + +Q G W ++ V ++ V
Sbjct: 181 LITDRGIGNGMSILMFISIAATFPSALWAIKTQ--GDLAGGWIEFGTVIAVGLVMVALVV 238
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 239 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGIIPVIFASSLLYIPALV 293
Query: 301 ASIL-GSPFWQHVKEILNPETSVGARP---WVYYTIYAFFVFLFNIFDIANLPKEIADYL 356
A G+ W K + + G P Y+T+ FF F + I+ P+E+AD +
Sbjct: 294 AQFSGGTSGW---KTWIEQNLTKGDHPIYIATYFTLIVFFAFFY--VAISFNPEEVADNM 348
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G
Sbjct: 349 KKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALVGFNA-NQNFPFGG 407
Query: 417 TSVLIIVGSIIELRRSYQA 435
TS+LIIVG +E + ++
Sbjct: 408 TSILIIVGVGLETVKQIES 426
>gi|389795115|ref|ZP_10198250.1| preprotein translocase subunit SecY [Rhodanobacter fulvus Jip2]
gi|388431248|gb|EIL88332.1| preprotein translocase subunit SecY [Rhodanobacter fulvus Jip2]
Length = 440
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 207/439 (47%), Gaps = 36/439 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS--VDELGDF--GAELK 81
+E+R+R+F +V+ R+G FIP+PG + P S V+G+ +D F GA +
Sbjct: 16 TELRQRIFFVIGALVVFRLGSFIPVPGVN----PAAMTSLVNGNGLMDMFNMFSGGALER 71
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
S F LG+ P I ASI++Q++ +VPSL LRKEG G K+ Y + ++G A+ ++
Sbjct: 72 FSVFALGVIPYISASIVIQMMGSVVPSLQALRKEGESGKRKMTMYTRFGTVGLALFQSFG 131
Query: 142 VACYSLPYSIYAASHSVKH------VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+A +L + A V + +M + L G M + W+ + ++E G G G SL+I
Sbjct: 132 IAV-ALQKQVAAGGAPVVYHPGFGFIMASVIGLTAGTMFLMWLGEQMTERGIGNGISLLI 190
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
GI+ G E + L + ++ + G+ VT + V + R++ + Y
Sbjct: 191 FAGIVAGLPEAVVHTLGMANNGELTVLKLLM-VFGLVLAVTAFVVFMERAQRRITVNY-- 247
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG----SPFWQH 311
A + ++P IN SG+ P + + LL FP+ + G S + Q
Sbjct: 248 ---ARRGGGQNAYQNQSSHLPLKINMSGVIPPIFASSLLMFPATAITWFGTGHQSRWLQE 304
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 369
+ + LNP P +Y +Y+ V F F A + E AD L + GA IP ++PG
Sbjct: 305 LTQSLNP-----GEP-LYDIVYSILVIGFAFFYTAIVFNADETADNLKRSGALIPGIRPG 358
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
+AT Y+ + G L L ++ + + + + F G TS+LI+V +++
Sbjct: 359 RATASYVDAVMTRLTGVGALYLVLVCLVPSFMQSFW---HVPFYFGGTSLLIVVVVVMDF 415
Query: 430 RRSYQAYNVMPSLSKALRR 448
QA+ V L++
Sbjct: 416 TSQIQAHLVSHQYESLLKK 434
>gi|380300442|ref|ZP_09850135.1| protein translocase subunit secY/sec61 alpha [Brachybacterium
squillarum M-6-3]
Length = 434
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 203/425 (47%), Gaps = 30/425 (7%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELG 74
+N+ + E+R ++ T L+ + R+G FIP PGFD ++ S +GS LG
Sbjct: 1 MNSFVRALRTPELRNKILFTLGLLAVYRLGVFIPTPGFDYTNVMTCSDQSQAAGSSSVLG 60
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y +
Sbjct: 61 MVSLFSGGALLQLSIFSLGVMPYITASIIIQLLRVVIPRFEALHKEGQSGTAKLTQYTRY 120
Query: 130 ISLGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTI 182
+++G AIL++ + + + S+ +++ + G + + W+ + I
Sbjct: 121 LTIGLAILQSTTIITLVRSGNFFPGCTLELIPDQSIPALVLMVLTMTVGTVLIMWMGEMI 180
Query: 183 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 242
+E G G G SL+I I + L ++ +L G W F L +L + +V + V V
Sbjct: 181 TERGIGNGMSLLIFTSIAASFPVALGQIF-ELQG----WLTFSLVIL-IALLVMLGVVFV 234
Query: 243 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
+ R++ +QY + + YIP +N +G+ PV+ + +LA P++ AS
Sbjct: 235 EQSQRRIPVQYAKRMVGRRMYGGT-----STYIPIKVNQAGVIPVIFASSILALPTMAAS 289
Query: 303 ILGSPFWQHVKEILNPETSVGAR-PWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKM 359
G P V I N +GA W+Y +Y + F F I +EIAD + K
Sbjct: 290 -FGEPGEPWVDWI-NTHLVMGASFSWIYALVYVALIIFFAFFYVSITFNAEEIADNMKKY 347
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G +PNV+ GK T YL + + G + L+I++ YL ++ F +G S+
Sbjct: 348 GGFVPNVRAGKPTERYLQYVINRIQTPGAIYLAIISLIPLFALVYLGA-SQNFPLGGASL 406
Query: 420 LIIVG 424
LII+G
Sbjct: 407 LIIIG 411
>gi|425470380|ref|ZP_18849250.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9701]
gi|389884060|emb|CCI35631.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9701]
Length = 439
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/433 (30%), Positives = 215/433 (49%), Gaps = 29/433 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL +T L+V+ R G F+P+PG DR + + S + + +L
Sbjct: 10 TAQETFMQMAQAAGLRGRLLITLGLLVLLRFGMFVPIPGLDRARLAEIIQSNAALGILDL 69
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 132
G L F LGI P I ASI++Q+L +PSL L+K EG G KI +I+
Sbjct: 70 FTGGGLSTLGIFALGILPYINASIIVQLLTAALPSLEDLQKNEGEAGRRKIAQITRYIAF 129
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
G++I++++ + L + + ++ + T LV G+M + WI + I+E G G G+S
Sbjct: 130 GWSIIQSIGI-TLGLLVANGVVAGTLPSIAATVLALVAGSMFVMWISELITERGLGNGAS 188
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
L+I V I+ +TL ++ + ++ LL VF ++ + V V EG R++
Sbjct: 189 LLIFVNIVAVLPKTLGDTITFAQQGGRQAIAQVVILLLVFLVMIIGIVFVQEGTRRI--- 245
Query: 253 YYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPF 308
+ SA R+ E Y+P +N G+ P++ + +L P L L +P
Sbjct: 246 ----PIVSARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLVLPFQLVQALPTDNPV 301
Query: 309 WQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGARI 363
Q + +++N RP W Y Y+ + F+ F I N PK+++ L KMG I
Sbjct: 302 GQVLVQLVN-----ALRPDSWGYVAFYSLLILGFSFFYASLIVN-PKDMSQNLKKMGTSI 355
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PG AT YL + G L LS++AT T+++ + +G TS+LI+V
Sbjct: 356 PGIRPGTATTNYLEGVLNRLTLLGALFLSLVATVPTVVESA-TGVTTFRGLGATSLLILV 414
Query: 424 GSIIELRRSYQAY 436
G I+ + Q Y
Sbjct: 415 GVAIDTAKQIQTY 427
>gi|410658508|ref|YP_006910879.1| Preprotein translocase secY subunit [Dehalobacter sp. DCA]
gi|410661495|ref|YP_006913866.1| Preprotein translocase secY subunit [Dehalobacter sp. CF]
gi|409020863|gb|AFV02894.1| Preprotein translocase secY subunit [Dehalobacter sp. DCA]
gi|409023851|gb|AFV05881.1| Preprotein translocase secY subunit [Dehalobacter sp. CF]
Length = 429
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 214/439 (48%), Gaps = 30/439 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +++ IR+++ T ++++I RIG IP+P DR ++ Q+ + G D
Sbjct: 2 ILETLKDAWKVPSIRKKIGFTLLMLLIFRIGSHIPIPFMDREVL-QNMMG-SGGLFDFFN 59
Query: 75 DF-GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW--I 130
F G LK S F L I P I ASI++Q+L ++P L +L KEG G +KI Y + +
Sbjct: 60 TFSGGSLKRFSVFSLSIMPYITASIIIQLLTVVIPYLERLSKEGDQGRKKIVQYTRYGTV 119
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
LGF + + +I S + ++ A +L G + W+ + I+E G G G
Sbjct: 120 VLGFINGFGLTIGLRG-ALTIPQESLRILIYIMIAIVLTAGTAFLMWLGEQITEKGIGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SLII GI+ G + + K L LL W ++GL+ + ++ V + EG R++
Sbjct: 179 ISLIIFAGIVAGIPDAI-KYLVGLLQVGEIGWISIVGLVVIAALIIAAVVFIQEGQRRIP 237
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPF 308
+QY A +IP +N +G+ P++ L+AFP+ +A+ L S F
Sbjct: 238 VQY-----AKRVVGRKQYGGQSSHIPLKVNQAGVIPIIFGISLMAFPATIATWLPQDSAF 292
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNV 366
++ L S + P Y +YA + F F I P ++AD L K G IP +
Sbjct: 293 ALFAQKWLQMNGSAYSIP--YLIMYALLIIFFTYFYTGITFNPVDVADNLKKYGGFIPGI 350
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PG+ T +YL KI + GG+ L+++A +++ + N +G TS+LI+V
Sbjct: 351 RPGRPTSDYLFKILSRVTLAGGIFLALIAVLPSLIMGFTGIDN--IYLGGTSLLIVVSVA 408
Query: 427 IE---------LRRSYQAY 436
++ ++R YQ +
Sbjct: 409 LDTMKQMENQLMQRHYQGF 427
>gi|315918285|ref|ZP_07914525.1| translocase SecY [Fusobacterium gonidiaformans ATCC 25563]
gi|313692160|gb|EFS28995.1| translocase SecY [Fusobacterium gonidiaformans ATCC 25563]
Length = 426
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 208/434 (47%), Gaps = 33/434 (7%)
Query: 17 NNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG- 74
N+ S K E+R R+ T ++ +++RIG FIP PG D D L+ ++ D LG
Sbjct: 8 NSKLSSIMKVPELRDRILFTLLMFLVARIGTFIPAPGVD-----TDRLAAMTAQNDILGY 62
Query: 75 ----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
GA ++S F LGI P I ASI++ +L I+P + +++KEG G KI + ++
Sbjct: 63 INMFSGGAFTRVSIFALGIIPYINASIVVSLLAAIIPQIEEIQKEGEAGRNKITQWTRYL 122
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
++ A+++ V C L + + T L G + + W+ + IS G G G
Sbjct: 123 TIAIALVQGFGV-CMWLQSVGLVFDPGILFFLTTIATLTAGTVFLMWVGEQISVKGIGNG 181
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SL+I + +++ + + + + GS P +L + + M VV G RK+
Sbjct: 182 VSLLIFLNVISRGPSNIVQTIQTMSGSKF-LIPVLLAVAAAGILTIMGIVVFQLGQRKIP 240
Query: 251 LQYY--GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ Y GF ++S YIP +N SG+ PV+ + L+ P+++ + + S +
Sbjct: 241 IHYVGKGFNSRGGMGQNS-------YIPLKLNSSGVMPVIFASVLMMIPTVMINAIPSKY 293
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNV 366
+K L+ + VY +YA + F+ F A + P+++AD L + G IP +
Sbjct: 294 --AIKTTLS--MMFNQQHPVYMIVYALVIVFFSFFYTAIVFDPEKVADNLKRGGGTIPGI 349
Query: 367 KPGKATIEYLTKIQASTRF-WGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
+PG T+EYL + TR WGG L LA S + + G T ++I+VG
Sbjct: 350 RPGIETVEYLEGV--VTRITWGGALF--LAAISILPFAIFSALGLPVFFGGTGIIIVVGV 405
Query: 426 IIELRRSYQAYNVM 439
I+ + A+ VM
Sbjct: 406 AIDTVQQIDAHLVM 419
>gi|254487369|ref|ZP_05100574.1| preprotein translocase, SecY subunit [Roseobacter sp. GAI101]
gi|214044238|gb|EEB84876.1| preprotein translocase, SecY subunit [Roseobacter sp. GAI101]
Length = 473
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 198/420 (47%), Gaps = 26/420 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+++R R+ T L+++ R+G FIP+PG D + Q S G + F GA ++
Sbjct: 40 TDLRNRILFTLGLLIVYRLGTFIPVPGIDGTALRQFMESAGQGIGGMVSMFTGGALGRMG 99
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q++ +VP+L QL+KEG G +KI Y + ++ A L+A +A
Sbjct: 100 IFALGIMPYISASIIVQLMTSMVPALEQLKKEGEQGRKKINQYTRFGTVALATLQAYGLA 159
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
SL AA + M LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 160 V-SLEAGDIAADPGMYFRMACMITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAEV 218
Query: 204 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
+ + S G S P ++G+L + + M+ V + RK+ +QY ++
Sbjct: 219 PAAIAQFFSS--GRSGAISPAVIVGVLVMVIVTIMFVVFMERALRKIHIQYPRRQVGQKM 276
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---PFWQHVKEILNPE 319
+ ++P +NP+G+ P + + LL P +++ G+ P + P
Sbjct: 277 YDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGNSTGPVMSVLLANFGP- 330
Query: 320 TSVGARPWVYYTIYAFFVFL--FNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
+P A VF F F+++ P E+AD L +P ++PGK T EYL
Sbjct: 331 ----GQPLYLLFFVAMIVFFAYFYTFNVSFKPDEVADNLKNQNGFVPGIRPGKKTAEYLE 386
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ G L+ + IL LR + F G TSVLI+V ++ + Q++
Sbjct: 387 YVVNRVLVLGAAYLAAVC----ILPEILRGQFAIPFYFGGTSVLIVVSVTMDTIQQVQSH 442
>gi|300742038|ref|ZP_07072059.1| preprotein translocase, SecY subunit [Rothia dentocariosa M567]
gi|300381223|gb|EFJ77785.1| preprotein translocase, SecY subunit [Rothia dentocariosa M567]
Length = 435
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 198/429 (46%), Gaps = 36/429 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF--GAELK 81
+++RR+L T +IV+ R+G FIP PG + Q + G+ D + F GA L+
Sbjct: 12 ADLRRKLLFTLGMIVLYRMGTFIPAPGISYGTVQQCLNANQTHGGAYDIINLFSGGALLQ 71
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
LS F LG+ P I ASI++Q+L ++P +L EG G K+ Y ++++ A+L A
Sbjct: 72 LSIFALGVMPYITASIIIQLLRVVIPRFQELHDEGAQGQAKLTQYTRYLTIALALLNATT 131
Query: 142 VACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+ + + V H++V L G + W+ + I+E G G G SL+I
Sbjct: 132 IVSMARSGVLLGNCPGIIPQDDVLHILVIIITLCAGTGVIMWMGEQITERGVGNGMSLLI 191
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYY 254
I + + L +L Q G V W ++GL M AVV V + R+V +QY
Sbjct: 192 FTSIASSFPNALGSILEQ-QGPFVFWSVCLVGL------AVMLAVVYVEQSVRRVPVQY- 243
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI------LGSPF 308
A I YIP +N +G+ P++ + LL P I+A P
Sbjct: 244 ----AKRMIGRRTIGGTSTYIPLKVNMAGVIPIIFASSLLTLPGIIAQFNTPQGGAAPPE 299
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNV 366
W + +N + G P +Y +Y + F F +A P E+AD + K G IP V
Sbjct: 300 WVN---WVNTYLTRGDHP-LYIVLYFLLILGFTYFYVAVTFDPVEVADNMKKYGGFIPGV 355
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+ GK T YL+ + G L L++++ ++ L N+ F G S+LI+VG
Sbjct: 356 RAGKPTERYLSYVLTRITLPGSLYLAVVSMIP-LVALVLFNANQNFPFGGASLLIVVGVG 414
Query: 427 IELRRSYQA 435
++ + A
Sbjct: 415 LDTLKQVSA 423
>gi|194099937|ref|YP_002003075.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae
NCCP11945]
gi|268593796|ref|ZP_06127963.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae 35/02]
gi|268600010|ref|ZP_06134177.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae MS11]
gi|268604611|ref|ZP_06138778.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae PID1]
gi|268687499|ref|ZP_06154361.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae
SK-93-1035]
gi|291042797|ref|ZP_06568538.1| preprotein translocase SECY subunit [Neisseria gonorrhoeae DGI2]
gi|385336846|ref|YP_005890793.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae
TCDC-NG08107]
gi|193935227|gb|ACF31051.1| preprotein translocase SECY subunit [Neisseria gonorrhoeae
NCCP11945]
gi|268547185|gb|EEZ42603.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae 35/02]
gi|268584141|gb|EEZ48817.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae MS11]
gi|268588742|gb|EEZ53418.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae PID1]
gi|268627783|gb|EEZ60183.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae
SK-93-1035]
gi|291013231|gb|EFE05197.1| preprotein translocase SECY subunit [Neisseria gonorrhoeae DGI2]
gi|317165389|gb|ADV08930.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 436
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 211/438 (48%), Gaps = 22/438 (5%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 253
I GI +G + K+++ S+ +L + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALLIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
K R S T ++PF +N +G+ P + + ++ FPS L GS V
Sbjct: 242 A--KRQFNGRAGSQNT----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSADTNSVL 295
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
+ G +Y ++A V F F A + PKE+A+ L K GA +P ++PG+
Sbjct: 296 HKIAGLLQHGQ--LLYMALFAATVIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQ 353
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIELR 430
T YL K+ +G L + T+ ++ +L + N F +G TS+LI+V ++
Sbjct: 354 TSRYLEKVVLRLTLFGALYI----TTICLIPEFLTTVLNVPFYLGGTSLLILVVVTMDFS 409
Query: 431 RSYQAYNVMPSLSKALRR 448
+Y + K + R
Sbjct: 410 TQINSYRLTQQYDKLMTR 427
>gi|418287365|ref|ZP_12899974.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM233]
gi|372203843|gb|EHP17444.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM233]
Length = 436
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 211/438 (48%), Gaps = 22/438 (5%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 253
I GI +G + K+++ S+ + + GV ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVFGVLLLI--YLVVYFESAQRKIPIHY 241
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
K R S T ++PF +N +G+ P + + ++ FPS L GS V
Sbjct: 242 A--KRQFNGRAGSQNT----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSADTNSVL 295
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
+ G +Y ++A V F F A + PKE+A+ L K GA +P ++PG+
Sbjct: 296 HKIAGLLQHGQ--LLYMALFAATVIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQ 353
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIELR 430
T YL K+ +G L + T+ ++ +L + N F +G TS+LI+V ++
Sbjct: 354 TSRYLEKVVLRLTLFGALYI----TTICLIPEFLTTVLNVPFYLGGTSLLILVVVTMDFS 409
Query: 431 RSYQAYNVMPSLSKALRR 448
+Y + K + R
Sbjct: 410 TQINSYRLTQQYDKLMTR 427
>gi|452943498|ref|YP_007499663.1| protein translocase subunit secY/sec61 alpha [Hydrogenobaculum sp.
HO]
gi|452881916|gb|AGG14620.1| protein translocase subunit secY/sec61 alpha [Hydrogenobaculum sp.
HO]
Length = 430
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 212/443 (47%), Gaps = 37/443 (8%)
Query: 16 LNNAAESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+NN + + E +R+R+ T ++ I R+G IP+PG D + D++S + GS+ L
Sbjct: 1 MNNFLKEILELETLRKRVVFTLIVFAIYRLGSHIPIPGVDPVAL-SDFMSNLKGSLFSLY 59
Query: 75 DF--GAEL-KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWI 130
D G L +++ F LG+ P I ASI+MQ+L +P L +L KE D G +KI Y +I
Sbjct: 60 DIFSGGNLSRMTLFALGVMPYISASIVMQLLSSAIPELQRLAKEEGDYGRQKINEYTKYI 119
Query: 131 SLGFAILEAVIVACY----SLPYSIYAASHSVKHVMVTAFL-LVCGAMTMSWICDTISES 185
++ A +++ +A + + P+ H +V A L +V M + W+ D I+E
Sbjct: 120 TVFVAGFQSLGIATWLEHQTSPHGYPVVPHGGILFVVLAVLGIVASTMILVWLGDMITEK 179
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G G S++I GI+ + E + +S L + + F +G + + V V+ E
Sbjct: 180 GIGNGMSMLIFAGIVANFPEATIRFVSMLRHGDISPFAF-VGAILIVIAVIAAIVIFQEA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
R++ +QY R++ Y+P +NP+G+ P++ LL PS + +
Sbjct: 239 ERRIPIQY---PRRQVGRQE--FVGGATYLPIKLNPAGVIPIIFAQSLLIVPSTILGFIK 293
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARI 363
+P Q + + NP + Y Y + F F A L P ++A+ L K I
Sbjct: 294 NPIAQSIHDAFNPLS------LPYNFAYVVLIIFFTYFYTAVLINPYDVAENLKKANGFI 347
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P V+PG+ T+++ + G + LS++A L +L+ F G T+ LI+V
Sbjct: 348 PGVRPGQQTVKFFESVINRLVIIGAVFLSVVAIVPLFLTVWLK---VPFYFGGTTALIVV 404
Query: 424 GSIIE---------LRRSYQAYN 437
G ++ + + Y+AY
Sbjct: 405 GVALDTLNQIDAQIITKKYKAYT 427
>gi|383937185|ref|ZP_09990592.1| preprotein translocase subunit SecY [Rheinheimera nanhaiensis
E407-8]
gi|383701728|dbj|GAB60683.1| preprotein translocase subunit SecY [Rheinheimera nanhaiensis
E407-8]
Length = 442
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 209/437 (47%), Gaps = 32/437 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++ RL + I++ R+G F+P+PG D ++ Q + G++ E+ + GA +
Sbjct: 16 SELKARLLFVLLAIIVFRLGSFVPIPGIDAAVLAQLFEQ-QKGTIVEMFNMFSGGALERA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P++ +L+KEG G KI + +L A L+A+ +
Sbjct: 75 SVFALGIMPYISASIIVQLLTVVHPAMAELKKEGEAGKRKINQMTRYGTLALATLQAIGI 134
Query: 143 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A LP + + LV G M + W+ + I+E G G G SL+I GI+
Sbjct: 135 AT-GLPNMMQGLVINPGFAFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLLIFTGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLA 259
G+ + + + Q + + +L +GV + W VV E G R++ + Y A
Sbjct: 194 AGFPSAIGQTIEQARQGDLHF--LLLVAIGVIVVAITWFVVFFERGQRRIVVNY-----A 246
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS------PFWQHVK 313
+ ++P +N +G+ P + + ++ FP +AS GS F Q +
Sbjct: 247 KRQQGRQVFAAQSSHLPLKVNMAGVIPPIFASSIILFPGTIASWFGSGEGVVANFLQELA 306
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
L+P +P +Y +Y+ + F F A + P++ AD L K GA IP ++PG+
Sbjct: 307 LTLSP-----GQP-LYMMLYSAAIIFFCFFYTALVFNPRDTADNLKKSGAFIPGIRPGEQ 360
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +Y+ K+ G L ++ + + + + + F G TS+LIIV I++
Sbjct: 361 TSKYIDKVMTRLTLAGALYITFIC---LVPEFMMVAWDVQFYFGGTSLLIIVVVIMDFMA 417
Query: 432 SYQAYNVMPSLSKALRR 448
Q + + L++
Sbjct: 418 QVQTHLMSHQYDSVLKK 434
>gi|375337681|ref|ZP_09779025.1| preprotein translocase subunit SecY [Succinivibrionaceae bacterium
WG-1]
Length = 443
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 204/429 (47%), Gaps = 36/429 (8%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAE 79
KSE+ R+ +VI R+G +IP+PG + ++ F S + LG F GA
Sbjct: 14 KSELMNRILFVIFGLVIFRLGSYIPVPGINTNVLEN---MFDSEGGNVLGMFNMFSGGAL 70
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+ S LGI P I ASI++Q+ +VP L +L+KEG G I Y W +L +++A
Sbjct: 71 SRASILALGIMPYISASIIIQLASVVVPRLAELKKEGESGRRTITKYTRWGTLILGLVQA 130
Query: 140 VIVACYSLPYSIYA----ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+A Y LP I A+ + ++V L G M + W+ + I+E G G G SL+I
Sbjct: 131 TGIA-YGLPNMIPGLVDEANMGWQFIVVATISLTTGTMFLMWLGEQITERGIGNGISLLI 189
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
GI+ G + Q + ++ +L + VT + V V G R++ + Y
Sbjct: 190 FAGIVAGLPHAIAATFEQTRQGELNVIGLLI-ILAIVVAVTYFVVFVERGQRRITVNY-- 246
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFW 309
K + R SP + ++P +N SG+ P + + ++ FPS +A+ G +
Sbjct: 247 MKRQNGNRVYSPPST---HLPLKLNMSGVIPAIFASSIILFPSTIAAWFGKGQGTFASIL 303
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVK 367
+ IL+P +P +Y +YA + F F A + P+EIA+ L K GA I ++
Sbjct: 304 SEISSILSP-----GQP-LYEILYAVAIIFFCFFYTAMVFNPREIAENLKKSGAIITGIR 357
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
G+ T +++ K+ G L + + +L ++ N F G TS+LIIV I+
Sbjct: 358 SGEQTAKHIDKVMTRLTLAGSLYMVFVCLVPQLLMNFF---NVQFYFGGTSLLIIVVVIM 414
Query: 428 ELRRSYQAY 436
+ Q++
Sbjct: 415 DFMAQLQSH 423
>gi|149199523|ref|ZP_01876558.1| protein translocase subunit SecY [Lentisphaera araneosa HTCC2155]
gi|149137458|gb|EDM25876.1| protein translocase subunit SecY [Lentisphaera araneosa HTCC2155]
Length = 453
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 210/434 (48%), Gaps = 39/434 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF------G 77
++R++L T +IV+ R+ +P+PG D ++ DY+ S S ++L G
Sbjct: 12 QDLRKKLLYTVWVIVLVRVLKNVPIPGIDLNVLADLMDYVKNQSESANKLVGMANVFSGG 71
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF-AI 136
A KL+ LGI P I ASI+MQ++ + P+L +L+K+G G +K+ Y ++++ A+
Sbjct: 72 ALQKLAIGVLGIMPYITASIIMQLMTPVFPNLEKLQKDGSHGRQKLNQYTRYMTIVICAV 131
Query: 137 LEAVIVACYSLPYSIYAA--------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
A++ P + + V+ T ++ A+ + W+ + I++ G G
Sbjct: 132 QSAMMAVAMHTPSKLLGVPGFEDLVINKGSAFVIQTTIIVTASAILIMWLGEQITDKGLG 191
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF--MLGLLGVFTIVTMWAVVVTEGC 246
G+S+II + +L+ + + S+ W +L ++G+ IVT V + +G
Sbjct: 192 NGASIIITINVLSSMPQAFAAVYSKYQEGE---WNLVQILVVVGILFIVTAATVALVQGM 248
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ L+Y A A + + E Y+P +N +G+ P++ + L+ FP ++ + +G
Sbjct: 249 RKIPLKY-----ARDASSRNAMIEKTSYLPLKVNHAGVMPIIFASALMMFPPMIINKIGG 303
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
F + V P G+ Y I + +F F +A P +IAD LN+ GA +P
Sbjct: 304 DFARTVA----PYFDFGSTS--YLIIQGVMILVFTFFWVATQFNPIQIADDLNRSGAFVP 357
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI----GFTSVL 420
+PG+ T +L G + L ILA +L + + + F I G TS+L
Sbjct: 358 GHRPGEPTSTFLNDTMTRITVAGAIFLVILALLPYVLMNAMGSGSTDFIITQFFGGTSLL 417
Query: 421 IIVGSIIELRRSYQ 434
I+VG +++ + +
Sbjct: 418 IMVGVVLQTMQQIE 431
>gi|373853730|ref|ZP_09596529.1| preprotein translocase, SecY subunit [Opitutaceae bacterium TAV5]
gi|391228141|ref|ZP_10264348.1| preprotein translocase, SecY subunit [Opitutaceae bacterium TAV1]
gi|372473257|gb|EHP33268.1| preprotein translocase, SecY subunit [Opitutaceae bacterium TAV5]
gi|391223634|gb|EIQ02054.1| preprotein translocase, SecY subunit [Opitutaceae bacterium TAV1]
Length = 495
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 221/445 (49%), Gaps = 39/445 (8%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
A S E+R R+F T L+ I+R+G IPLPG D R + +++L G +G +
Sbjct: 6 ANSLKIPELRSRIFYTLALLFIARVGAHIPLPGLDPRPL-EEFLKGAMGDGGAMGLYNMF 64
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA LK + LGI P I ASI+ Q++ +VP L +L++EG G +KI Y + ++
Sbjct: 65 TGGALLKGAVCALGIMPYISASIIFQLMTAVVPGLARLQQEGDVGRQKIAQYTRYATVLI 124
Query: 135 AILE-AVIVACYSLP----------YSIYAASHSVKH---VMVTAFLLVCGAMTMSWICD 180
+++ A+++ P +++ + H ++ + G M ++W+ +
Sbjct: 125 CVVQGALLILALENPNKLPGFGGYDVNVHGQIVVISHTWFLVSGVIFMTAGTMLLTWLGE 184
Query: 181 TISESGFGQGSSLIICVGILT---GYTETLYKMLSQLLGS-SVRWWPFMLGLLGVFTIVT 236
I++ G G G SL+I VGIL+ G TL+ +L +G+ + + F+ ++ +F VT
Sbjct: 185 QITQRGIGNGISLLITVGILSDIPGAMTTLWTLLRAPVGTPGISYLSFLFMVI-LFFAVT 243
Query: 237 MWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAF 296
M ++V +G RK+ +QY A + + ++P +N SG+ PV+ + +L F
Sbjct: 244 MGIIMVVQGQRKIPVQY-----AKRVVGNKVMGGQNSFLPLKVNYSGVMPVIFASAILLF 298
Query: 297 PSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIAD 354
P + S LG + ++ ++ VYY A + F+ F ++ + P +IA+
Sbjct: 299 PQQIFSYLGVAI--DMPSLVEFSQNLSRGHPVYYVTMALLILFFSYFWVSVMFKPIQIAE 356
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILD---HYLRRINEG 411
L K G IP V+PG+ T +L + G + L+I+A L + +RI+
Sbjct: 357 DLKKHGGYIPGVRPGEPTARFLDFVMTRITLAGAIFLTIIAVFPDFLYAEFNVPQRISSF 416
Query: 412 FSIGFTSVLIIVGSIIELRRSYQAY 436
F G T +LI VG I++ + + +
Sbjct: 417 F--GGTGMLITVGVILDTMKQIETF 439
>gi|2500728|sp|Q59912.1|SECY_STRGB RecName: Full=Protein translocase subunit SecY
gi|1213241|emb|CAA65158.1| membrane translocase [Streptomyces galbus]
Length = 437
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 212/439 (48%), Gaps = 32/439 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T +IV+ R+G IP+PG D + + Q + SG+ G
Sbjct: 1 MLTAFARAFRTPDLRKKLLFTLAIIVVYRVGTHIPIPGVDYKNV-QQCVREASGNQGLFG 59
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 130 ISLGFAILE--AVIVACYSLPY----SIYAASHSVKHVMVTAFLLVC---GAMTMSWICD 180
+++ AIL+ ++ S P S+ + + T +++C G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSAPLFGRCSVGGQIVPDQSIFTTITMVICMTAGTCVVMWLGE 179
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I++ G G G S+++ + I + L+ + Q G+ W ++ V I+ V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKKQ--GTLAGGWIEFGTVIAVGLIMVALVV 237
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALV 292
Query: 301 ASIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYL 356
A G+ W K + + G P +Y Y + F F +A N P+E+AD +
Sbjct: 293 AQFAGGNSGW---KSWVEQNLTKGDHP-IYIVTYFLLIVFFAFFYVAISFN-PEEVADNM 347
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++ G+ T EYL+ + + G L L ++A T+ ++ F G
Sbjct: 348 KKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALVGFGA-SQNFPFGG 406
Query: 417 TSVLIIVGSIIELRRSYQA 435
TS+LIIVG +E + ++
Sbjct: 407 TSILIIVGVGLETVKQIES 425
>gi|352096503|ref|ZP_08957330.1| preprotein translocase, SecY subunit [Synechococcus sp. WH 8016]
gi|351676153|gb|EHA59307.1| preprotein translocase, SecY subunit [Synechococcus sp. WH 8016]
Length = 439
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 203/426 (47%), Gaps = 37/426 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ---------DYLS-FVSGSVDELGDF 76
E+R R+ T L+++ R+G +IP+PG DR Q +L F G + LG
Sbjct: 23 ELRGRVLTTLGLLMLVRLGIYIPMPGIDRVAFEQFIEQGGTLIGFLDIFTGGGISTLG-- 80
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 135
F LGI P I ASI++Q+L +P L L+K EG G KI +++LG+
Sbjct: 81 -------VFALGILPFINASIIIQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWG 133
Query: 136 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+++VI A Y++ S V V+ TA LV G+M + W+ + I+E G GQG+SL+I
Sbjct: 134 TVQSVIFAMILRQYAVEGLSDVV-FVVQTALALVTGSMIVMWLSEVITERGIGQGASLVI 192
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
+ I+ + L + + ++ L+ VF I + + V EG R+
Sbjct: 193 FLNIVATLPKALGSTIEKAQTGDRGDVVGIIVLVLVFLITIVGIIFVQEGARR------- 245
Query: 256 FKLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
+ SA R+ + + + Y+P +N G+ P++ + L+ P +A++ +P
Sbjct: 246 LPIVSAKRQVGGTALLPSRQSYLPLKLNAGGVMPIIFASALIFLPITIANVTNNPILIRA 305
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGK 370
LNP A PW Y ++ + F F ++ P +IA L + G IP V+PG
Sbjct: 306 ASALNPGA---ANPWPYAIVFFSLILGFAYFYSSLSLNPSDIATNLKRGGVAIPGVRPGS 362
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
AT YL ++ GGL L +A + ++ + +G TS+LI+VG I+
Sbjct: 363 ATAAYLEGVKNRLTLLGGLFLGAVAIIPSAVERA-TGVTTFQGLGATSLLILVGVAIDTA 421
Query: 431 RSYQAY 436
+ Q Y
Sbjct: 422 KQVQTY 427
>gi|218440641|ref|YP_002378970.1| preprotein translocase subunit SecY [Cyanothece sp. PCC 7424]
gi|218173369|gb|ACK72102.1| preprotein translocase, SecY subunit [Cyanothece sp. PCC 7424]
Length = 439
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 215/438 (49%), Gaps = 39/438 (8%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS---- 69
A E+F + + +R RL +T L+++ R G FIP+PG DR + F+ S
Sbjct: 10 TAQETFMQMAQAAGLRGRLLITIGLLILVRFGIFIPVPGLDR----ARFSDFIQNSPALG 65
Query: 70 VDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIW 128
+ ++ G L F LGI P I ASI+MQ+L +PSL L+K EG G KI
Sbjct: 66 ILDIFTGGGLSTLGIFALGILPYINASIIMQLLTAAIPSLEDLQKNEGEAGRRKISQITR 125
Query: 129 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+++LG+AI+++ + L + S + ++ T L G+M + WI + I+E G G
Sbjct: 126 YVALGWAIIQSFGI-TLGLLVANGVISGGILPILETVLALTAGSMFVMWISELITERGIG 184
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
G+SL+I V I+ +TL + + ++ LL VF I+ + V V EG R+
Sbjct: 185 NGASLLIFVNIVAVLPKTLGNTIDYAQTGGRQAVAQVVILLLVFLIMIVGIVFVQEGTRR 244
Query: 249 VKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA-SILG 305
+ + SA R+ E Y+P +N G+ P++ + +L P LA S+ G
Sbjct: 245 IPI-------ISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLILPFQLARSVSG 297
Query: 306 ----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNK 358
S V L P + W+Y Y+ +F F+ F I N PK+++ L K
Sbjct: 298 EGTVSQILIQVVNYLQPGS------WIYVVFYSLLIFFFSFFYASLIVN-PKDMSQNLKK 350
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
MGA IP ++PG AT YL + F G + LSI+AT T+++ + +G TS
Sbjct: 351 MGASIPGIRPGTATSNYLEGVLNRLTFLGAIFLSIVATVPTLVEGA-TGVTTFQGLGATS 409
Query: 419 VLIIVGSIIELRRSYQAY 436
+LI+VG I+ + Q Y
Sbjct: 410 LLILVGVAIDTAKQIQTY 427
>gi|59802140|ref|YP_208852.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae FA 1090]
gi|293398182|ref|ZP_06642387.1| preprotein translocase, SecY subunit [Neisseria gonorrhoeae F62]
gi|59719035|gb|AAW90440.1| putative preprotein translocase SecY subunit [Neisseria gonorrhoeae
FA 1090]
gi|291611445|gb|EFF40515.1| preprotein translocase, SecY subunit [Neisseria gonorrhoeae F62]
Length = 436
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 209/438 (47%), Gaps = 22/438 (5%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 253
I GI +G + K+++ S+ +L + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALLIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
+ A S ++PF +N +G+ P + + ++ FPS L GS V
Sbjct: 242 AKRQFNGRAGSQS------THMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSADTNSVL 295
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
+ G +Y ++A V F F A + PKE+A+ L K GA +P ++PG+
Sbjct: 296 HKIAGLLQHGQ--LLYMALFAATVIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQ 353
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIELR 430
T YL K+ +G + T+ ++ +L I N F +G TS+LI+V ++
Sbjct: 354 TSRYLEKVVLRLTLFGAFYI----TTICLIPEFLTTILNVPFYLGGTSLLILVVVTMDFS 409
Query: 431 RSYQAYNVMPSLSKALRR 448
+Y + K + R
Sbjct: 410 TQINSYRLTQQYDKLMTR 427
>gi|403715743|ref|ZP_10941419.1| preprotein translocase SecY subunit [Kineosphaera limosa NBRC
100340]
gi|403210506|dbj|GAB96102.1| preprotein translocase SecY subunit [Kineosphaera limosa NBRC
100340]
Length = 437
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 211/445 (47%), Gaps = 44/445 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F E+R++L T ++ + R+G IP PG + + + +G ++L
Sbjct: 1 MLTAFGRAFTTPELRKKLLFTIFVMTLFRLGSHIPTPGVSYVAVQECRPA--AGQANQLL 58
Query: 75 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
GA L+LS F LGI P I ASI++Q+L ++P L+KEG G K+ Y
Sbjct: 59 GLANLFSGGALLQLSIFALGIMPYITASIIVQLLTVVIPRFETLKKEGQTGQAKLTQYTR 118
Query: 129 WISLGFAILEAVIVACYSL-PYSIYAASHSVKHVMVTAFLLV--------CGAMTMSWIC 179
++++G A+L++ ++ P ++ S+ + ++ F+ V G + W+
Sbjct: 119 YLTIGLAVLQSSTFVTFARNPAQLFPGSNCEQILVDDGFVTVAIMVLTMTAGTGLIMWMG 178
Query: 180 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 239
+ I+E G G G SL+I I G+ +L+ + + RW F+L +L ++ +
Sbjct: 179 ELITERGVGNGMSLLIFTSIAAGFPSSLWAIKQR----DGRWDTFILVILMGLALIAV-- 232
Query: 240 VVVTEGC-RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 298
VV E C R++ +QY K R T YIP +N + + P++ LLA P
Sbjct: 233 VVFVEQCQRRIPVQYA--KRMVGRRMYGGTTT---YIPLKVNQANVIPIIFAASLLAIPG 287
Query: 299 ILASILGSPFWQHVKEI------LNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPK 350
++ F+Q E+ + G PW Y IY + F F I+ P+
Sbjct: 288 LVVQ-----FYQGRPEVPVWVEWIQAHLVRGDHPW-YMAIYVLLIVFFTFFYVSISFNPQ 341
Query: 351 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINE 410
++AD + K G IP ++ G+ T +YL+ + G L L+I++ ++ L N+
Sbjct: 342 DVADNMKKYGGFIPGIRAGRPTAQYLSYVLNRITVVGALYLAIVSLIP-LVALVLIDANQ 400
Query: 411 GFSIGFTSVLIIVGSIIELRRSYQA 435
F G TS+LIIVG +E + ++
Sbjct: 401 NFPFGGTSLLIIVGVGLETVKQIES 425
>gi|341820692|emb|CCC56991.1| preprotein translocase subunit SecY [Weissella thailandensis
fsh4-2]
Length = 435
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 211/435 (48%), Gaps = 30/435 (6%)
Query: 12 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 71
L +VLN+ E +IR++L T ++++ R+G +I +PG + + + S + GS+
Sbjct: 2 LKTVLNSLKEK----DIRKKLLFTLWILIVYRLGAYITVPGINTAALTEVANSGL-GSIL 56
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ G S F +G+SP + A I++Q+L IVP V+ K+G G K+ W+
Sbjct: 57 NMFSGGGLTNYSLFAMGVSPYVTAQIVVQLLQMDIVPRFVEWSKQGEVGRRKLNQVTRWL 116
Query: 131 SLGFAILEAV-IVACYS-LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
++G A ++++ I A ++ L + + + ++ F+L G M W+ + I+E G G
Sbjct: 117 TIGLAFVQSIGITAGFNQLSQVNLVKTPNTETYLLIGFILTAGTMLSVWLGEMITERGLG 176
Query: 189 QGSSLIICVGILTGYTETLYKMLSQ--LLGSS-VRWWPFMLGLLGVFTIVTMWAVVVTEG 245
QG S++I GI+ +Y++ + L G R W F++GL+ +F +V + +
Sbjct: 177 QGVSMLIFAGIIARLPAGIYQLFKEHILQGDDPARGWAFLVGLMIIFVVVIAFVTWFNQA 236
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
RKV +QY S + Y+P IN +G+ PV+ + LL P +
Sbjct: 237 IRKVPMQY---------TRRSVGSGSSSYLPLRINIAGVIPVIFASSLLVTPQTILQAFA 287
Query: 306 SPF-----WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
S F + V + L+ ET G VY + F F + + P+++ + L K G
Sbjct: 288 SKFADASWYNTVMQYLSIETMQGGI--VYTLLIVLFTFFYAFVQVN--PEKVQENLQKQG 343
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
+ I V PG +T ++++ + G L L +A + + H ++ ++ TS+L
Sbjct: 344 SYIVGVWPGPSTEKWMSGLLMRLSVVGALFLGFVALAPILATHVF-GLDSNLAMSGTSIL 402
Query: 421 IIVGSIIELRRSYQA 435
I++G I+L R +
Sbjct: 403 IVIGVAIDLIRQLEG 417
>gi|170718269|ref|YP_001785287.1| preprotein translocase subunit SecY [Haemophilus somnus 2336]
gi|168826398|gb|ACA31769.1| preprotein translocase, SecY subunit [Haemophilus somnus 2336]
Length = 441
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 213/444 (47%), Gaps = 30/444 (6%)
Query: 17 NNAAESFFKSEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 75
N + SE++ RL FV LIV RIG FIP+PG D ++ Q L G++ ++ +
Sbjct: 8 QNRSTQSGTSELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQ-LLEQQKGTIIDMFN 65
Query: 76 F---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
GA + S F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L
Sbjct: 66 MFSGGALSRASIFALGIMPYISASIIIQLLTTVHPALAELKKEGEAGRRKISKYTRYSTL 125
Query: 133 GFAILEAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++A+ ++ LP + + LV G M + W+ + I+E G G G
Sbjct: 126 VLATVQAIGIST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNG 184
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SLII GI+ G + + + Q + +L + VF VT + V G R++K
Sbjct: 185 ISLIIFAGIVAGLPSAIGQTIEQARQGQMHLLVLLLIAVIVFA-VTYFVVFFERGQRRIK 243
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---- 306
++Y A + + ++P +N +G+ P + + ++ FP+ L S G
Sbjct: 244 VEY-----AKRQQGRQIVGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTSWFGQGSNL 298
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
+ + +L+P +P +Y +YA + F+ F A P++ AD L K GA IP
Sbjct: 299 EWLTELSLLLHP-----GQP-LYLIVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIP 352
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG+ T Y+ KI GGL ++ + I+ N F G TS+LI+V
Sbjct: 353 GIRPGEQTSRYIDKIMTRLTLIGGLYITFVCLVPYIMTSAW---NVQFYFGGTSLLIVVV 409
Query: 425 SIIELRRSYQAYNVMPSLSKALRR 448
I++ Q++ + AL++
Sbjct: 410 VIMDFIVQIQSHLMSTKYESALKK 433
>gi|268597765|ref|ZP_06131932.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae FA19]
gi|268683069|ref|ZP_06149931.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae PID332]
gi|268551553|gb|EEZ46572.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae FA19]
gi|268623353|gb|EEZ55753.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae PID332]
Length = 436
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 211/439 (48%), Gaps = 24/439 (5%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 253
I GI +G + K+++ S+ +L + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALLIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 254 YGFKLASAARE-DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
A R+ + + ++PF +N +G+ P + + ++ FPS L GS V
Sbjct: 242 -------AKRQFNGRVGSQNTHMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSADTNSV 294
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGK 370
+ G +Y ++A V F F A + PKE+A+ L K GA +P ++PG+
Sbjct: 295 LHKIAGLLQHGQ--LLYMALFAATVIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGE 352
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIEL 429
T YL K+ +G + T+ ++ +L + N F +G TS+LI+V ++
Sbjct: 353 QTSRYLEKVVLRLTLFGAFYI----TTICLIPEFLTTVLNVPFYLGGTSLLILVVVTMDF 408
Query: 430 RRSYQAYNVMPSLSKALRR 448
+Y + K + R
Sbjct: 409 STQINSYRLTQQYDKLMTR 427
>gi|417002454|ref|ZP_11941837.1| preprotein translocase, SecY subunit [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325479122|gb|EGC82219.1| preprotein translocase, SecY subunit [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 424
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 188/390 (48%), Gaps = 25/390 (6%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
+ EIR+R + T +++V+ R+G IP+P D + + Y + VD L G L
Sbjct: 11 EEEIRKRFYFTLLMLVVYRLGNNIPIPFIDTKALADAYQNIQGTLVDYLNMLTGGGLSTL 70
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LG+ P I ASI+MQ+L ++P L +L +EG G + I+ Y ++++ AI +AV +
Sbjct: 71 SIFALGVQPYITASIVMQLLTVVIPRLEELSREGEQGRKTIQKYTRYVTIALAIFQAVAI 130
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
++ +A+ K VM +L+ G M ++W+ +TI+E G G G+SLII +GI+
Sbjct: 131 TNGLYGAALSSATGFQKVVM--NIVLIGGTMFVTWMGETITEKGLGNGTSLIIFMGIIAS 188
Query: 203 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQY----YGFK 257
+ T+ + L + ++ + V IV +AVV ++EG RKV +QY G K
Sbjct: 189 FPRTIARWQQGLHYDTTSILSIIIMAIIVVLIV--FAVVEISEGERKVPIQYAKRVVGRK 246
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 317
+ +IP +N G+ P++ + +LA PS ++ G +
Sbjct: 247 MYGGQ---------STHIPIKVNMGGVMPIIFASAVLAIPSTVSLFFGGNGESSIANFFQ 297
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEY 375
A VY I + + +F F I E A L + G +P ++PGK T ++
Sbjct: 298 NSNFGFA---VYLIIQSILILVFAYFYNQIQFNTVEYAKQLQQNGGFVPGIRPGKPTSDF 354
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYL 405
L + F G + L++L I L
Sbjct: 355 LANVSTKITFIGSIALALLTIVPAIASRIL 384
>gi|407458911|ref|YP_006737014.1| preprotein translocase subunit secY [Chlamydia psittaci M56]
gi|405786120|gb|AFS24865.1| preprotein translocase subunit secY [Chlamydia psittaci M56]
Length = 457
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 221/456 (48%), Gaps = 39/456 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 76
+ F +E+R++LF T L+ R+G FIP+PG + + + S + +L D
Sbjct: 6 QIFSIAELRQKLFFTFALLAACRVGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +PS+ + +E D G KI ++G
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLLVFMPSIQREIRESPDQGKRKIGRLTRLFTVGL 125
Query: 135 AILEAVIVACY------SLPYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A + S+P + S K + T ++ G + + WI +
Sbjct: 126 AFIQSLLFAKFALKMNMSIPGIVLPTLLSSKLFGAPWIFYLTTVIVMTTGTLLLMWIGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 237
IS+ G G G SLII +GIL + L ++++L LGS S +L L +F V +
Sbjct: 186 ISDRGIGNGVSLIISLGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCLIFVFVLV 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
+++ EG RK+ +QY + RE I Y+P +N +G+ PV+ + LL FP
Sbjct: 246 TTILIIEGVRKIPVQYA--RRVIGRRE---IPGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 298 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIA 353
+ + + S + + V +L+P + WVY + Y + F F A P++IA
Sbjct: 301 ATIGQFMSSDSSWLKRVAMMLSPGS------WVYSSCYVLLIIFFTYFWTATQFHPEQIA 354
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGF 412
+ K A IP ++ GK T YL G + L+++A +IL L N +
Sbjct: 355 SEMKKNNAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVIAILPSILGRVLNVDANVSY 414
Query: 413 SIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+G T++LI+VG +++ + A+ +M L++
Sbjct: 415 FLGGTAMLIVVGVVLDTMKQVDAFLLMRRYDSFLKK 450
>gi|345008590|ref|YP_004810944.1| preprotein translocase subunit SecY [Streptomyces violaceusniger Tu
4113]
gi|344034939|gb|AEM80664.1| preprotein translocase, SecY subunit [Streptomyces violaceusniger
Tu 4113]
Length = 437
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 210/444 (47%), Gaps = 42/444 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T +IV+ R+G IP+PG + + + Q + G G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLAIIVLFRLGQHIPIPGINYKNV-QTCMDLAKGQQGLFG 59
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGQSKITQYTRY 119
Query: 130 ISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICD 180
+++ AIL+ + + S++ + S+ V + G + W+ +
Sbjct: 120 LTIALAILQGTGLVATARSGSLFQSCPVGGQIVRDDSIFTTAVMVITMTAGTALIMWLGE 179
Query: 181 TISESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMW 238
+++ G G G S+++ V I G+ ++ K +++G W F L +L +V +
Sbjct: 180 LVTDRGIGNGMSILMFVSIAAGFPSAMWSIKQQGKIMGG---WLEFGLVILCGLAMVGL- 235
Query: 239 AVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 298
V V + R++ +QY + + + YIP +N +G+ PV+ + LL P+
Sbjct: 236 VVFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPMKVNQAGVIPVIFASSLLYIPA 290
Query: 299 ILA----SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKE 351
++ S G W ++ G P +Y Y + F F +A N P+E
Sbjct: 291 LIVQFSNSKAGWATW------ISQNFVKGDHP-IYIATYFLLIVFFAFFYVAISFN-PEE 342
Query: 352 IADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEG 411
+AD + K G IP ++ G+ T EYL+ + + G L L ++A T+ L N+
Sbjct: 343 VADNMKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGALYLGLIALVPTVALVTLNA-NQN 401
Query: 412 FSIGFTSVLIIVGSIIELRRSYQA 435
F G TS+LIIVG +E + ++
Sbjct: 402 FPFGGTSILIIVGVGLETVKQIES 425
>gi|160881765|ref|YP_001560733.1| preprotein translocase subunit SecY [Clostridium phytofermentans
ISDg]
gi|160430431|gb|ABX43994.1| preprotein translocase, SecY subunit [Clostridium phytofermentans
ISDg]
Length = 442
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 221/446 (49%), Gaps = 42/446 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F +IR +L T ++++I R+G +P+PG ++ +I + + L
Sbjct: 1 MLKTVRNAFKIKDIRNKLLFTFMVLIIVRLGSQLPVPGVNQAVIANWLQNNFGSGLSFLD 60
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
F G+ ++S F LGI P I +SI+MQ+L +P L +++K+G G +KI ++++
Sbjct: 61 SFTGGSFTRMSLFALGIGPYITSSIIMQLLTIAIPKLEEMQKDGESGRKKIAEISRYVTI 120
Query: 133 GFAILEAV-IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
G +I+E+V +V +S ++ V++TA G+ + W+ + I+E G G G
Sbjct: 121 GLSIIESVAMVIGFSGSGALEGGLTFTNIVVITA-SFTAGSAILMWLGERITEKGVGNGI 179
Query: 192 SLIICVGILTGYTETLYKMLSQ-LLGSS-VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
S+I+ + I+ +Y ++ + +LG S V+ + ++ V + + +++ RK+
Sbjct: 180 SVILLINIVANMPRDIYGLIEKFVLGESVVKGVTAAIIIVAVILLSVVLIILLNAAQRKI 239
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---- 305
+QY A + + +IP +N +G+ PV+ ++ FP I+AS G
Sbjct: 240 AVQY-----AKKVQGRKMVGGQSSHIPLKVNTAGVIPVIFAVSIMQFPIIIASFFGVQPA 294
Query: 306 -SPFWQHVKEILNPET-----------SVGARPWVYYTIYAFFVFLFNIFDIANLPKEIA 353
+ FW V +LN ++ +VG +Y + FF + + I P E+A
Sbjct: 295 RAYFWPKVLHMLNSQSWFNIKNGEFKYTVGV--LIYMALIVFFAYFYT--SITFNPMEVA 350
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATS----STILDHYLRRIN 409
+ + K G IP ++PGK T EYLTK+ F G + L I+A S + D ++
Sbjct: 351 NNMKKQGGFIPGIRPGKPTTEYLTKVLNYIIFIGAIGLMIVAIIPIFFSGMFDAHV---- 406
Query: 410 EGFSIGFTSVLIIVGSIIELRRSYQA 435
S TS++I+V ++E + ++
Sbjct: 407 ---SFSGTSLIIVVSVVLETMKQVES 429
>gi|408680117|ref|YP_006879944.1| Preprotein translocase secY subunit [Streptomyces venezuelae ATCC
10712]
gi|328884446|emb|CCA57685.1| Preprotein translocase secY subunit [Streptomyces venezuelae ATCC
10712]
Length = 450
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 205/442 (46%), Gaps = 32/442 (7%)
Query: 13 SSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE 72
+VL A +F ++R++L T +IV+ R+G IP+PG + Q G+
Sbjct: 10 GTVLTAFARAFKTPDLRKKLLFTLAIIVLYRLGAHIPVPGVSYEAVQQCVKQASEGNNSL 69
Query: 73 LG-----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 127
G GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 70 FGLVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYT 129
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVM---------VTAFLLVCGAMTMSWI 178
++++ A+L+ + + ++++ V+ + G + W+
Sbjct: 130 RYLTVALAVLQGTGLVATAKSGALFSGCRVADQVVPDPSIFTIATMVITMTAGTCIVMWL 189
Query: 179 CDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW-PFMLGLLGVFTIVTM 237
+ I++ G G G S+++ + I G+ L+ + G + W F +L F +V +
Sbjct: 190 GELITDRGIGNGMSILMFISIAAGFPGALWAIKES--GKLAKGWIEFGTVILIGFVMVAL 247
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
V V + R++ +QY + + + YIP +N +G+ PV+ + LL P
Sbjct: 248 -VVFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIP 301
Query: 298 SILASILGSPF-WQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIA 353
+++A S W K + G P+ Y+ + FF F + I+ P+E+A
Sbjct: 302 ALIAQFSNSTAGW---KTWIEAHFVKGDHPYYIATYFLLIVFFAFFY--VAISFNPEEVA 356
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS 413
D + K G IP ++ G+ T EYL+ + + G L L ++A T+ N F
Sbjct: 357 DNMKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGGANANFP 416
Query: 414 IGFTSVLIIVGSIIELRRSYQA 435
G TS+LIIVG +E + ++
Sbjct: 417 FGGTSILIIVGVGLETVKQIES 438
>gi|269218986|ref|ZP_06162840.1| preprotein translocase, SecY subunit [Actinomyces sp. oral taxon
848 str. F0332]
gi|269212097|gb|EEZ78437.1| preprotein translocase, SecY subunit [Actinomyces sp. oral taxon
848 str. F0332]
Length = 428
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 202/421 (47%), Gaps = 27/421 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++RR+L T ++VI R+G F+P P + Q G L
Sbjct: 1 MLKAFAAAFRTPDLRRKLLFTVAIMVIYRLGTFVPAPFVSIHNVRQCAAQKGEGGFLNLL 60
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+ GA L+LS F LGI P I ASI++Q+L ++P QL KEG G K+ Y +++
Sbjct: 61 NMFSGGAMLQLSVFALGIMPYITASIIIQLLRVVIPRFEQLHKEGQSGTAKLTEYTRYLT 120
Query: 132 LGFAILEAVIVACYSLPYSIYAASHS----VKHVMVTAFLLVCGAMT--MSWICDTISES 185
+G +L++ + + H V +T +L A T + W+ + I+E
Sbjct: 121 IGLGVLQSAVYVSLANTTLFQGCRHQPIPGANPVKITMAILAMTAGTGLIMWLAELITER 180
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G G S++I GI + L ++ G W + +L VF +T+ V V +
Sbjct: 181 GVGNGMSILIFTGICANFPGMLLNVIRSNAG-----WKGAIVVLAVFLAITVVVVFVEQC 235
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
R++ +QY A I Y+P IN + + PV+ + LL P ++AS G
Sbjct: 236 QRRIPVQY-----AKRVVGRRMIGGSTTYLPIKINMANVIPVIFASSLLMLPQMIAS-FG 289
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARI 363
+ V+ I + T G W YY +YA +F F F I +E+AD + + G I
Sbjct: 290 NQSSGWVQFIQSNLTRQGV--W-YYGLYALLIFGFTFFYTSITFDTEEVADNMKRYGGFI 346
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P V+ G+ T EYL+ + + G + L+++A +++ + I +G + G TS++I+V
Sbjct: 347 PGVRAGRPTAEYLSYVSKRVTWVGAIYLTVVALIPSVMFSEM-GIFQG-TFGGTSIMILV 404
Query: 424 G 424
G
Sbjct: 405 G 405
>gi|317059785|ref|ZP_07924270.1| protein translocase subunit secY [Fusobacterium sp. 3_1_5R]
gi|313685461|gb|EFS22296.1| protein translocase subunit secY [Fusobacterium sp. 3_1_5R]
Length = 426
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 207/436 (47%), Gaps = 37/436 (8%)
Query: 17 NNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG- 74
N+ S K E+R R+ T ++ +++RIG FIP PG D D L+ ++ D LG
Sbjct: 8 NSKLSSIMKVPELRDRILFTLLMFLVARIGTFIPAPGVD-----TDRLAAMTAQNDILGY 62
Query: 75 ----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
GA ++S F LGI P I ASI++ +L I+P + +++KEG G KI + ++
Sbjct: 63 INMFSGGAFTRVSIFALGIIPYINASIVVSLLAAIIPQIEEIQKEGEAGRNKITQWTRYL 122
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
++ A+++ V C L + + T L G + + W+ + IS G G G
Sbjct: 123 TIAIALVQGFGV-CMWLQSVGLIFDPGILFFLTTIATLTAGTVFLMWVGEQISVKGIGNG 181
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SL+I + +++ + + + + GS P +L + + M VV G RK+
Sbjct: 182 VSLLIFLNVISRGPSNIVQTIQTMSGSKF-LIPVLLAVAAAGILTIMGIVVFQLGQRKIP 240
Query: 251 LQYY--GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ Y GF ++S YIP +N SG+ PV+ + L+ P+++ + + S +
Sbjct: 241 IHYVGKGFNSRGGMGQNS-------YIPLKLNSSGVMPVIFASVLMMIPTVMINAIPSKY 293
Query: 309 W--QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
+ I N + VY +YA + F+ F A + P+++AD L + G IP
Sbjct: 294 AIKTTLSMIFNQQHP------VYMIVYALVIVFFSFFYTAIVFDPEKVADNLKRGGGTIP 347
Query: 365 NVKPGKATIEYLTKIQASTRF-WGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
++PG T+EYL + TR WGG L LA S + + G T ++I+V
Sbjct: 348 GIRPGIETVEYLEGV--VTRITWGGALF--LAAISILPFAIFSALGLPVFFGGTGIIIVV 403
Query: 424 GSIIELRRSYQAYNVM 439
G I+ + A+ VM
Sbjct: 404 GVAIDTVQQIDAHLVM 419
>gi|415715231|ref|ZP_11465785.1| preprotein translocase subunit SecY [Gardnerella vaginalis 1400E]
gi|388058622|gb|EIK81410.1| preprotein translocase subunit SecY [Gardnerella vaginalis 1400E]
Length = 446
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 206/431 (47%), Gaps = 28/431 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++F E+R ++ +I+I RIG FIP+PG D ++I S S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVIRACTAKLASSSENFIGLVNLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 136 ILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
IL++ + A ++ S+ ++V ++ G + W+ + I++ G G
Sbjct: 126 ILQSTTILVTARSGALFNYQCGQVIPDGSMWSLLVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLG-VFTIVTMWAVVVTEGCR 247
QG S++I + I +G+ L+++ G++ W F ++G V ++ ++ V R
Sbjct: 186 QGMSVLIFMSICSGFLPKLWEIGWGTNGTNGDWTKF--SIVGCVLLVILIFVDFVELAQR 243
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
++ +QY + S Y+P +N SG+ P + + +LA P++LA G
Sbjct: 244 RIPVQYTRRMIGRKMYGGS-----STYLPLKVNMSGVIPPIFASSILAIPTLLAQ-FGDS 297
Query: 308 FWQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIP 364
V+ I N + W +Y + FF F + +I P E AD + + G IP
Sbjct: 298 RKDWVRWI-NANLANSTSVWYIALYTVMIVFFCFFYT--EITFNPDETADNMKEYGGFIP 354
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++ G AT YL+ + G + L +A T+L L +N G T++LII G
Sbjct: 355 GIRAGSATSRYLSYVMNRLNTVGAVYLLFVALIPTVLIMSL-HLNMKLPFGGTTILIIAG 413
Query: 425 SIIELRRSYQA 435
++ R +A
Sbjct: 414 VGLDTLRQAKA 424
>gi|427413174|ref|ZP_18903366.1| preprotein translocase, SecY subunit [Veillonella ratti
ACS-216-V-Col6b]
gi|425715990|gb|EKU78976.1| preprotein translocase, SecY subunit [Veillonella ratti
ACS-216-V-Col6b]
Length = 420
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 214/438 (48%), Gaps = 47/438 (10%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L + F +E+R ++ T ++ ++ R G IP+PG D +I F SG + L
Sbjct: 1 MLEGLSNIFKITELRNKVAYTLLMFIVFRAGVHIPVPGVDASVIES---LFTSGGLFGLL 57
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW-- 129
D GA K S F + I+P I ASI+MQ+L +VP+ Q K+G DG +KI +
Sbjct: 58 DLFAGGALSKFSIFAMSITPYINASIIMQLLTAVVPTFEQWSKDGEDGRKKIAKVTRYGT 117
Query: 130 ISLGFAILEAVIVACYSLPYSIYAAS----HSVKHVMVTAFLLVCGAMTMSWICDTISES 185
+ LGF V + + Y++ A S +S V+V A +L G + WI + I+
Sbjct: 118 VVLGF-------VQAFGMSYALRANSALIDNSFLSVIVIAIILTAGTCLLMWIGEQITAY 170
Query: 186 GFGQGSSLIICVGILTGYT---ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 242
G G G SLII GI+ + T+Y+ L +G+ + + ++ V IV + + V
Sbjct: 171 GIGNGISLIIFAGIVARFPSGFSTIYEYLQ--VGTINIFQAILFAIIAVAMIV--FVIAV 226
Query: 243 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
T+G R++ +QY A ++P +N +G+ P++ + +L FP LA
Sbjct: 227 TQGQRRIPIQY-----AKRVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSVLMFPVTLAQ 281
Query: 303 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKM 359
+ + + + T + +YA +F+F F A N+ ++AD + K
Sbjct: 282 FVQVDWVRTLANYFTWGTPLQT------VLYAVLIFIFTYFYTAISINI-TDMADNMKKY 334
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFT 417
G IP ++PGK T +Y+ ++ F G L L+++A IL +++ I EG G T
Sbjct: 335 GGFIPGIRPGKPTADYVDRVMTRITFAGALFLALVA----ILPNFIGGITGIEGVYFGGT 390
Query: 418 SVLIIVGSIIELRRSYQA 435
++LI+VG ++ + ++
Sbjct: 391 ALLIVVGVALDTMQQVES 408
>gi|308802998|ref|XP_003078812.1| SecY homolog; targetted to the thylakoid membrane; the protein has
a chloroplast targetting signal, but the processing site
is not known (ISS) [Ostreococcus tauri]
gi|116057265|emb|CAL51692.1| SecY homolog; targetted to the thylakoid membrane; the protein has
a chloroplast targetting signal, but the processing site
is not known (ISS) [Ostreococcus tauri]
Length = 552
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 211/459 (45%), Gaps = 50/459 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF--VSGSVDELGDFGA 78
++FFK ++ ++ L+V+SR+G +IP+ G DR + V G VD L G+
Sbjct: 108 DNFFKGKLPGKIATVFALLVLSRVGTYIPISGVDRAAFAESLSGGGGVMGYVDTLTG-GS 166
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIW--------- 128
KL F LGI P I +SI+ Q+L + P L +L+KE G G K + Y
Sbjct: 167 ISKLGIFSLGIVPYINSSIIFQLLGSVFPELKKLQKEEGEAGRRKFQQYQRSRSIELQRL 226
Query: 129 ---------------WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAM 173
+ +LGFAI++AV Y P+ S + + L GAM
Sbjct: 227 KQHRLTLILFRASHRYGALGFAIVQAVGQCLYIRPF---VEDFSPVWLFEQSCALTAGAM 283
Query: 174 TMSWICDTISESGFGQGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGV 231
+ +I + ++E G G+SL+I I++ ++ + L+Q G + F G
Sbjct: 284 ILMYIGELLNEVKLGNGTSLLIFANIVSALPSSVGQTITLAQEKGDATVLPVF----FGA 339
Query: 232 FTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTT 291
F + T+ V V E RK+ + Y + R ++ Y+PF +N +G+ P++ +
Sbjct: 340 FALTTLGIVYVQEAERKIPMNY-------STRFNAGGLAKSSYLPFKVNSAGVMPIIFAS 392
Query: 292 YLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKE 351
LLA P+ L+ + V L+P G P V + FF + + + PK+
Sbjct: 393 SLLALPATLSRFTDNGAVLGVARFLSPGGGAGYVP-VNVAMICFFNYFYTFLQLE--PKD 449
Query: 352 IADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINE 410
+AD L + GA IP V+PG AT +Y+T++ G + L LA + ++ +
Sbjct: 450 VADQLKRQGASIPGVRPGAATRDYITRVLERLSVLGSVFLGALALTPGAVEQVTGLQTFR 509
Query: 411 GFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRY 449
GF+ TS+LI+VG + R ++ VM S L +
Sbjct: 510 GFA--GTSLLILVGVATDSARKIRSELVMESYDTKLDEF 546
>gi|242081045|ref|XP_002445291.1| hypothetical protein SORBIDRAFT_07g007870 [Sorghum bicolor]
gi|241941641|gb|EES14786.1| hypothetical protein SORBIDRAFT_07g007870 [Sorghum bicolor]
Length = 552
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 199/417 (47%), Gaps = 20/417 (4%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAE 79
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 133 DFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLL-GTLDSFSGGGIG 191
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILE 138
+L LGI P I A I+ Q+L + P L L RKEG G +K+ Y + S+GFAI +
Sbjct: 192 -RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAIFQ 250
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL+I
Sbjct: 251 AIGQVLYLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTS 307
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I++ + + ++Q + +L ++ F ++ + V V E RK+ L Y
Sbjct: 308 IISYLPASFGRTVAQAFQDG--NYVGLLTIILSFFLLVLGIVYVQEAERKIPLNY----- 360
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
AS + + Y+PF +N SG+ P++ +T LA P LA G F + LNP
Sbjct: 361 ASRYSSRTGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFAGLDFLKKAAIALNP 420
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTK 378
++ V + AFF + + + P ++++ L + GA IP V+PGK+T Y+
Sbjct: 421 GGALYLPTNVL--LIAFFNYYYTFLQLD--PDDLSEQLKRQGASIPLVRPGKSTAAYIKT 476
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
+ + G L++LA ++++ + + TSVLI+VG + R QA
Sbjct: 477 VLSRISVLGSAFLAVLAAGPSVVEQ-ISHLTAFRGFAGTSVLILVGCATDTARKVQA 532
>gi|331091647|ref|ZP_08340481.1| preprotein translocase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330403404|gb|EGG82963.1| preprotein translocase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 438
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 211/429 (49%), Gaps = 24/429 (5%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GA 78
+F ++R+R+F T +++++ RIG +P PG D I + S + + F G+
Sbjct: 7 RAFQIDDVRKRIFYTFLMLIVVRIGSILPTPGVDPTYIQNFFKSQTGEAFNFFSAFTGGS 66
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S F L I+P I +SI+MQ+L +P L +++K+G DG +KI S ++++ A++E
Sbjct: 67 LERMSIFALSITPYITSSIIMQLLTIAIPKLEEMQKDGEDGRKKIASITRYVTVILALVE 126
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+ +A S ++ +V V L G+ + W+ + I+E G G G S+++ +
Sbjct: 127 STAMAV-GFGRSGLLVKYNFVNVAVAVLTLTAGSAFLMWVGERITEKGIGNGISIVLLIN 185
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
I++ + ++ + + GL L + +V ++ +V+ +G RK+ +QY
Sbjct: 186 IISRMPSDFMTLYTKFMKGKSLAKAGLAGLIILAILLVVVIFVIVLQDGQRKISVQY--- 242
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV-KEI 315
+ + + +IP +N +G+ PV+ + L+ P ++A LG + EI
Sbjct: 243 --SQKVQGRKSVGGQTTFIPLKVNTAGVVPVIFASSLMQTPVVIAGFLGKGNGSGIGSEI 300
Query: 316 L---------NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNV 366
L NPE + V Y + +F + I P EIA+ + K G IP +
Sbjct: 301 LKGLSSNNWCNPENLKYSWGLVLYIVLT-ILFAYFYTSITFNPLEIANNMKKSGGFIPGI 359
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PGK T+EYLTKI F G + L I+ + + +L S TS++IIVG +
Sbjct: 360 RPGKPTVEYLTKILNYIIFIGAVGLVIVQVIPFVFNGWL---GANVSFAGTSLIIIVGVV 416
Query: 427 IELRRSYQA 435
+E + ++
Sbjct: 417 LETLKQIES 425
>gi|296313385|ref|ZP_06863326.1| preprotein translocase, SecY subunit [Neisseria polysaccharea ATCC
43768]
gi|296840095|gb|EFH24033.1| preprotein translocase, SecY subunit [Neisseria polysaccharea ATCC
43768]
Length = 436
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 206/427 (48%), Gaps = 24/427 (5%)
Query: 29 RRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQ 86
+R LF+ LIV RIG IP+PG D + + Y S +G + L F G+ + S F
Sbjct: 18 KRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGMLNMFSGGSLERFSIFA 76
Query: 87 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 146
+GI P I ASI++Q I+PSL L+KEG G + I Y + ++ AIL+++ VA +
Sbjct: 77 IGIMPYISASIIVQFASEILPSLKALKKEGEAGRKVITKYTRYGTVLLAILQSLGVASFV 136
Query: 147 LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTET 206
+ S HV T LV G M + W+ + I+E G G G SLII GI +G
Sbjct: 137 FQQGVVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIASGIPSG 195
Query: 207 LYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAARE- 264
+ K+++ S+ +L + G ++ + VV E RK+ + Y A R+
Sbjct: 196 IAKLVTLTNQGSMSILTALLVVFGALLLI--YLVVYFESAQRKIPIHY-------AKRQF 246
Query: 265 DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGA 324
+ + ++PF +N +G+ P + + ++ FPS L GS V + G
Sbjct: 247 NGGVGSQNTHMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSADTNSVLHKIAGLLQHGQ 306
Query: 325 RPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQAS 382
+Y ++A V F F A PKE+A+ L K GA +P ++PG+ T YL K+
Sbjct: 307 --LLYMALFAATVIFFCYFYTALFFSPKEMAENLKKSGAFVPGIRPGEQTSRYLEKVVLR 364
Query: 383 TRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPS 441
+G L + T+ ++ +L + N F +G TS+LI+V ++ +Y +
Sbjct: 365 LTLFGALYI----TTICLIPEFLTTVLNVPFYLGGTSLLILVVVTMDFSTQINSYRLTQQ 420
Query: 442 LSKALRR 448
K + R
Sbjct: 421 YDKLMTR 427
>gi|167036820|ref|YP_001664398.1| preprotein translocase subunit SecY [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167039539|ref|YP_001662524.1| preprotein translocase subunit SecY [Thermoanaerobacter sp. X514]
gi|256752651|ref|ZP_05493503.1| preprotein translocase, SecY subunit [Thermoanaerobacter
ethanolicus CCSD1]
gi|300915210|ref|ZP_07132525.1| preprotein translocase, SecY subunit [Thermoanaerobacter sp. X561]
gi|307725134|ref|YP_003904885.1| preprotein translocase subunit SecY [Thermoanaerobacter sp. X513]
gi|320115242|ref|YP_004185401.1| preprotein translocase subunit SecY [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166853779|gb|ABY92188.1| preprotein translocase, SecY subunit [Thermoanaerobacter sp. X514]
gi|166855654|gb|ABY94062.1| preprotein translocase, SecY subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256748471|gb|EEU61523.1| preprotein translocase, SecY subunit [Thermoanaerobacter
ethanolicus CCSD1]
gi|300888934|gb|EFK84081.1| preprotein translocase, SecY subunit [Thermoanaerobacter sp. X561]
gi|307582195|gb|ADN55594.1| preprotein translocase, SecY subunit [Thermoanaerobacter sp. X513]
gi|319928333|gb|ADV79018.1| preprotein translocase, SecY subunit [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 418
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 210/432 (48%), Gaps = 35/432 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 80
++R+R+ T ++VI R+G IP+PG D ++I + G G F GA
Sbjct: 12 DDVRKRILYTLGMLVIFRVGSHIPVPGIDPKVIAN-----ILGQGQLFGFFDIISGGAFS 66
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+ F + I+P I ASI+MQ+L +PSL QL KEG +G +KI Y ++++ A+++A+
Sbjct: 67 NFTIFAMSITPYINASIIMQLLTIAIPSLEQLAKEGEEGRKKIAQYTRYLTVVLALIQAI 126
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ I ++ +++T L G + W+ + I+E+G G GSSLII GI+
Sbjct: 127 GMTIGLKSAVINPTFFNLTVIVIT---LTAGTAFLMWLGEKITENGIGNGSSLIIFAGII 183
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
+ +Y + SQ + + + + I+ + ++ TEG R++ +QY A
Sbjct: 184 SRIPNMIY-LTSQYIQAGTANIFGAIAFVVAELIMIVLIILATEGQRRIPVQY-----AK 237
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILNPE 319
+IP IN +G+ P++ LL FP LA+ S F+ V++ L+
Sbjct: 238 RVVGRKVYGGQSTHIPIRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQKWLSTS 297
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLT 377
+Y + + F F A + P +++D L K G IP ++PGK T ++LT
Sbjct: 298 G------LIYNILDILLIIGFTYFYTAVIFNPVDVSDNLKKYGGFIPGIRPGKPTTDFLT 351
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQA 435
++ F G L L+ +AT IL + G + G T++LI VG ++ + +
Sbjct: 352 RVLNRVTFVGALFLAFIATMPVILMNI-----TGLQLYFGGTALLIAVGVALDTMKQIEG 406
Query: 436 YNVMPSLSKALR 447
+ +M + L+
Sbjct: 407 HLIMRNYQGFLK 418
>gi|323141376|ref|ZP_08076267.1| preprotein translocase, SecY subunit [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414125|gb|EFY04953.1| preprotein translocase, SecY subunit [Phascolarctobacterium
succinatutens YIT 12067]
Length = 418
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 214/426 (50%), Gaps = 27/426 (6%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
A F +E+R+++ T + ++ R G IP+PG + +I Q F SG++ L D
Sbjct: 6 ANIFRITELRQKVLFTLAMFIVFRAGTHIPVPGVNASVIEQ---LFRSGNLFGLLDMFSG 62
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA K S F + I+P I ASI++Q+L +VP+L Q KEG +G +K +++ A
Sbjct: 63 GALSKFSIFAMSITPYINASIILQLLKVVVPTLEQWSKEGEEGFKKTTKLTRMLTVALAF 122
Query: 137 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++A +A Y L +I + + +++ A L G + + WI + I+ G G G SLII
Sbjct: 123 VQACGMA-YGLKMAI--NNPGIFSILLIAITLTAGTVFLMWIGEQITARGVGNGISLIIF 179
Query: 197 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
GI++ + L + L +V +L + + ++ ++++EG RK+ +QY
Sbjct: 180 AGIVSRLPDGLKVIFQYLQAGTVSLLNVIL-FAAIALAMVVFVIIISEGIRKIPVQYAKR 238
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
+ A YIP +N +G+ P++ + +L FP +A + P+ + + ++
Sbjct: 239 VVGKKAYGGH-----TSYIPLKVNQAGVIPIIFASSVLMFPVTIAQFVDVPWVKAMGKLF 293
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKMGARIPNVKPGKATI 373
+ + T+Y + F F A N+ +++D + K G IP ++PG T
Sbjct: 294 QWGSPLQT------TLYVLMILFFTYFYTAVSLNI-GDLSDNIKKNGGFIPGLRPGNPTT 346
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
EYL K+ + G + LS++A ++ ++ RI EG G T++LI+VG ++ +
Sbjct: 347 EYLDKVMSRITLAGAIFLSLIALMPHVIG-WVTRI-EGVYFGGTALLIVVGVALQTMKQI 404
Query: 434 QAYNVM 439
++ +M
Sbjct: 405 ESMVLM 410
>gi|405980212|ref|ZP_11038552.1| preprotein translocase, SecY subunit [Actinomyces turicensis
ACS-279-V-Col4]
gi|404390664|gb|EJZ85731.1| preprotein translocase, SecY subunit [Actinomyces turicensis
ACS-279-V-Col4]
Length = 430
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 210/424 (49%), Gaps = 31/424 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ A++F ++RR+L T ++ + R+G +IP PG D I Q ++ +L
Sbjct: 1 MLSAFAQAFRTPDLRRKLLFTLFIMAMFRLGSYIPTPGVDSTAIQQCLAQQEEANLLDLV 60
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQTGQAKLTQYTRYLT 120
Query: 132 LGFAILEAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+ +L+A + +++ A S ++ +++ G + W+ + I+E
Sbjct: 121 IFLGVLQATTTLTLARTGRMFSGCSANVLADDSWWMFLIMIIIMMAGTGVVMWLGELITE 180
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLL--GSSVRWWPFMLGLLGVFTIVTMWAVVV 242
G G G SL+I +T + ++ SQ+L G S +W + LL +F VT+ V +
Sbjct: 181 RGIGNGMSLLI-------FTSIIARLPSQMLAIGQSGKWGAVIAILLLLFA-VTLAVVFI 232
Query: 243 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
+ R++ +QY K R+ T YIP IN SG+ PV+ + +LA P ++A
Sbjct: 233 EQAQRRIPVQYA--KRMIGRRQYGGTTT---YIPLKINMSGVIPVIFASSILALPLMIAQ 287
Query: 303 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMG 360
G+ V+ I ++ WVY TIYA + F F I P+E+AD + + G
Sbjct: 288 -FGTQTDGWVQWI---SANLHQGSWVYLTIYALLILFFAFFYTVITFNPEEVADNMKRYG 343
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
IP ++ G+ T E+L+ + G L L I+A ++L L+ G T++L
Sbjct: 344 GFIPGIRAGRPTAEFLSYVINRITSAGALYLVIVALLPSLLIIPLKISQSQMPFGGTTLL 403
Query: 421 IIVG 424
IIVG
Sbjct: 404 IIVG 407
>gi|399528221|ref|ZP_10767875.1| preprotein translocase, SecY subunit [Actinomyces sp. ICM39]
gi|398361273|gb|EJN45048.1| preprotein translocase, SecY subunit [Actinomyces sp. ICM39]
Length = 430
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 200/422 (47%), Gaps = 27/422 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A++F ++RR+L T ++ R+G FIP PG D + + + S+ +L
Sbjct: 1 MLGAFAQAFRTPDLRRKLLFTLFIMAAFRLGSFIPTPGVDSQAVQRCMAQESQASLLDLV 60
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQTGQAKLTQYTRYLT 120
Query: 132 LGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+ IL+A + ++ + SV ++ +++ G + W+ + I+E
Sbjct: 121 IFLGILQATTTISLARSGQLFQSCQYDIIKDRSVLTFIMMIIVMMAGTGVIMWLGELITE 180
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G G SL+I I E L +G + +W + ++ + +V + V V +
Sbjct: 181 RGIGNGMSLLIFTSIAARLPEQLLS-----IGQAGKWGS-VAAIVALLLLVAIAVVYVEQ 234
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
R++ +QY K R+ T YIP IN SG+ PV+ + +LA P +A+
Sbjct: 235 AQRRIPVQYA--KRMIGRRQYGGTTT---YIPLKINMSGVIPVIFASSILALPP-MAAQF 288
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGAR 362
G P Q V+ I + + G+ Y TIYA F F I P E+AD + K G
Sbjct: 289 GKPDDQWVQWI-SAHFTQGST--FYLTIYALMTLFFTFFYTAITFNPDEVADNMKKYGGF 345
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP + G+ T EYL + G L L I+A ++ L+ + G T++LII
Sbjct: 346 IPGYRAGRPTAEYLRYVINRITSAGALYLVIIALLPSLAIIPLKLSSSQMPFGGTTLLII 405
Query: 423 VG 424
+G
Sbjct: 406 IG 407
>gi|293190239|ref|ZP_06608735.1| preprotein translocase, SecY subunit [Actinomyces odontolyticus
F0309]
gi|292821055|gb|EFF80008.1| preprotein translocase, SecY subunit [Actinomyces odontolyticus
F0309]
Length = 430
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 201/422 (47%), Gaps = 27/422 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A++F ++RR+L T ++ R+G FIP PG D + + + S+ +L
Sbjct: 1 MLGAFAQAFRTPDLRRKLLFTLFIMAAFRLGSFIPTPGVDSQAVQRCMAQESEASLLDLV 60
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQTGQAKLTQYTRYLT 120
Query: 132 LGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+ IL+A + ++ + SV ++ +++ G + W+ + I+E
Sbjct: 121 IFLGILQATTTISLARSGQLFQSCNHDIIKDRSVMTFIMMIIVMMAGTGVIMWLGELITE 180
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G G SL+I I E L +G + +W + ++ + +V + V V +
Sbjct: 181 RGIGNGMSLLIFTSIAARLPEQLLS-----IGQAGKWGS-VAAIVALLLLVAIAVVYVEQ 234
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
R++ +QY K R+ T YIP IN SG+ PV+ + +LA P +A+
Sbjct: 235 AQRRIPVQYA--KRMIGRRQYGGTTT---YIPLKINMSGVIPVIFASSILALPP-MAAQF 288
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGAR 362
GSP + V+ I + + G+ Y TIYA F F I P E+AD + K G
Sbjct: 289 GSPDDKWVQWI-SAHFTQGSS--FYLTIYALMTLFFTFFYTAITFNPDEVADNMKKYGGF 345
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP + G+ T EYL + G L L I+A ++ L+ + G T++LII
Sbjct: 346 IPGYRAGRPTAEYLRYVINRITTAGALYLVIIALLPSLAIIPLQLSSSQMPFGGTTLLII 405
Query: 423 VG 424
+G
Sbjct: 406 IG 407
>gi|154507844|ref|ZP_02043486.1| hypothetical protein ACTODO_00326 [Actinomyces odontolyticus ATCC
17982]
gi|153797478|gb|EDN79898.1| preprotein translocase, SecY subunit [Actinomyces odontolyticus
ATCC 17982]
Length = 430
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 201/422 (47%), Gaps = 27/422 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A++F ++RR+L T ++ R+G FIP PG D + + + S+ +L
Sbjct: 1 MLGAFAQAFRTPDLRRKLLFTLFIMAAFRLGSFIPTPGVDSQAVQRCMAQESEASLLDLV 60
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQTGQAKLTQYTRYLT 120
Query: 132 LGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+ IL+A + ++ + SV ++ +++ G + W+ + I+E
Sbjct: 121 IFLGILQATTTISLARSGQLFQSCNHDIIKDRSVMTFIMMIIVMMAGTGVIMWLGELITE 180
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G G SL+I I E L +G + +W + ++ + +V + V V +
Sbjct: 181 RGIGNGMSLLIFTSIAARLPEQLLS-----IGQAGKWGS-VAAIVALLLLVAIAVVYVEQ 234
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
R++ +QY K R+ T YIP IN SG+ PV+ + +LA P +A+
Sbjct: 235 AQRRIPVQYA--KRMIGRRQYGGTTT---YIPLKINMSGVIPVIFASSILALPP-MAAQF 288
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGAR 362
GSP + V+ I + + G+ Y TIYA F F I P E+AD + K G
Sbjct: 289 GSPNDKWVQWI-SAHFTQGSS--FYLTIYALMTLFFTFFYTAITFNPDEVADNMKKYGGF 345
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP + G+ T EYL + G L L I+A ++ L+ + G T++LII
Sbjct: 346 IPGYRAGRPTAEYLRYVINRITSAGALYLVIIALLPSLAIIPLQLSSSQMPFGGTTLLII 405
Query: 423 VG 424
+G
Sbjct: 406 IG 407
>gi|83854953|ref|ZP_00948483.1| preprotein translocase SecY [Sulfitobacter sp. NAS-14.1]
gi|83941475|ref|ZP_00953937.1| preprotein translocase SecY [Sulfitobacter sp. EE-36]
gi|83842796|gb|EAP81963.1| preprotein translocase SecY [Sulfitobacter sp. NAS-14.1]
gi|83847295|gb|EAP85170.1| preprotein translocase SecY [Sulfitobacter sp. EE-36]
Length = 466
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 209/442 (47%), Gaps = 31/442 (7%)
Query: 9 FIRLSSVLNNAAESFFK-----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL 63
+I +S+V + AA + + +++R R+ T L+++ R+G FIP+PG D + Q
Sbjct: 11 YIMVSAVESMAANTSWSALGKATDLRNRILFTLGLLIVYRLGTFIPVPGIDGTALRQFME 70
Query: 64 SFVSGSVDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
S G + F GA ++ F LGI P I ASI++Q++ +VP+L QL+KEG G +
Sbjct: 71 SAGQGIGGMVSMFTGGALGRMGIFALGIMPYISASIIVQLMTSMVPALEQLKKEGEQGRK 130
Query: 122 KIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 181
KI Y + ++ A L+A +A SL AA + + LV G M + W+ +
Sbjct: 131 KINQYTRFGTVALATLQAYGLAV-SLEAGDIAADPGMYFRIACMITLVGGTMFLMWLGEQ 189
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAV 240
I+ G G G SLII VGI+ + + S G S P ++G+L + M+ V
Sbjct: 190 ITARGIGNGISLIIFVGIIAEVPAAIAQFFSS--GRSGAISPAIIVGVLVMVIATIMFVV 247
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
+ RK+ +QY ++ + ++P +NP+G+ P + + LL P +
Sbjct: 248 FMERALRKIHIQYPRRQVGQKMYDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTI 302
Query: 301 ASILGS---PFWQHVKEILNPETSVGARPWVYYTIYAFFVFL--FNIFDIANLPKEIADY 355
++ G+ P + P +P A VF F F+++ P E+AD
Sbjct: 303 STFSGNSTGPVMSVLLANFGP-----GQPLYLLFFVAMIVFFAYFYTFNVSFKPDEVADN 357
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSI 414
L +P ++PGK T EYL + G L L+ + IL LR + F
Sbjct: 358 LKNQNGFVPGIRPGKKTAEYLEYVVNRILVLGSLYLAAVC----ILPEILRGQFAIPFYF 413
Query: 415 GFTSVLIIVGSIIELRRSYQAY 436
G TSVLI+V ++ + Q++
Sbjct: 414 GGTSVLIVVSVTMDTIQQVQSH 435
>gi|119718105|ref|YP_925070.1| preprotein translocase subunit SecY [Nocardioides sp. JS614]
gi|119538766|gb|ABL83383.1| protein translocase subunit secY/sec61 alpha [Nocardioides sp.
JS614]
Length = 437
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 201/429 (46%), Gaps = 34/429 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ A +F ++RR+L ++I + R+G +P PG D + GS +L
Sbjct: 1 MLSAFANAFRTPDLRRKLLFVVLIIGVFRLGSQVPTPGVDVGNVQACVDIATEGSNADLY 60
Query: 75 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
GA L+L+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SLVNMFSGGALLQLTIFALGIMPYITASIILQLLVVVIPRLEALKKEGQSGQTKITQYTR 120
Query: 129 WISLGFAILEAVIVACYSLPYSIYAA----------SHSVKHVMVTAFLLVCGAMTMSWI 178
+++LG A+L+A + + ++ + +V + G + W+
Sbjct: 121 YLTLGLAVLQATGIVALARSGNLLQGCDPNTFPLLHDNGTSTFLVMVVTMTAGTAVIMWL 180
Query: 179 CDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMW 238
+ I+E G G G SL+I I+ G+ +L+ + SS WW F G++ V +V +
Sbjct: 181 GELITEHGIGNGMSLLIFTQIIAGFPSSLWS-----VQSSKGWWIF--GIVMVTGLVIVA 233
Query: 239 AVV-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
AV+ V + R++ +QY + S YIP +N +G+ PV+ + LL P
Sbjct: 234 AVIFVEQAQRRIPVQYARRMVGRKMFGGS-----STYIPLKVNQAGVIPVIFASSLLYLP 288
Query: 298 SILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADY 355
++L S + + I N G P T + +F F F I P E+AD
Sbjct: 289 AMLVSFNPNADSRWANWI-NSYLVRGDHPLYMLTFFLLIIF-FTYFYVSITFNPNEVADN 346
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
+ K G IP ++ GK T +YL+ + + G L L +++ I + N+ F G
Sbjct: 347 MKKYGGFIPGIRAGKPTEDYLSYVLSRITLPGSLYLGLISLIPLIAFAVIGA-NQNFPFG 405
Query: 416 FTSVLIIVG 424
TS+LI+VG
Sbjct: 406 GTSILIMVG 414
>gi|163815995|ref|ZP_02207365.1| hypothetical protein COPEUT_02175 [Coprococcus eutactus ATCC 27759]
gi|158448805|gb|EDP25800.1| preprotein translocase, SecY subunit [Coprococcus eutactus ATCC
27759]
Length = 437
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 214/449 (47%), Gaps = 54/449 (12%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GA 78
+F +IRRRL T ++V+ R+G I +PG I + + + S++ F G+
Sbjct: 7 NAFKVQDIRRRLLYTFFILVVIRLGSLITVPGISADAIREYMQNALGDSLNIFSSFTGGS 66
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S F L ++P I ASI++Q+L +P+L +++K+G DG +KI + ++++G AILE
Sbjct: 67 FEQMSIFALSVTPYITASIIIQLLTIAIPALEEMQKDGEDGRKKITAITRYMTVGLAILE 126
Query: 139 AV-IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ +V + I +++ V+ +L G+ + W+ + +E G G G S+I+ +
Sbjct: 127 SSGLVVGFGNKGVI--DNYNFWTVLTIVVILTAGSAIVMWLGERATEKGVGNGISVILLI 184
Query: 198 GILTGYTETLYKMLSQLLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
I++ L M +Q + VR+ L ++ V + ++ + RK+ +QY
Sbjct: 185 NIVSTMPNDLKNMYTQFMKGKDFVRFTLVCLLIIAVIILTVVFVCALQGAERKIPVQY-- 242
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 315
A R + +IP +N +G+ PV+ + LL+ P I+ ++ ++K
Sbjct: 243 ---AKTVRGRKTMGGQSSHIPLKVNTAGVIPVIFASSLLSVPQIIVNLF------NIK-- 291
Query: 316 LNPETSVGAR---------------PW--VYYTIYAFFVFLFNIF--DIANLPKEIADYL 356
+ VGA+ PW + +Y VF F F I P EIA+ +
Sbjct: 292 ---SSGVGAKIMQALSQSYWFNRTYPWASIGLIVYILLVFFFAYFYTAITFNPMEIANNM 348
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++PG+ T +YL KI F G + L I+A + S G
Sbjct: 349 KKSGGFIPGIRPGQPTQDYLNKILNYIIFIGAVGLIIVACIPMFFSGFF---GANVSFGG 405
Query: 417 TSVLIIVGSIIE---------LRRSYQAY 436
TS++I+VG +IE L R+YQ +
Sbjct: 406 TSLIIVVGVVIETIKNIESRMLVRNYQGF 434
>gi|167629487|ref|YP_001679986.1| preprotein translocase subunit SecY [Heliobacterium modesticaldum
Ice1]
gi|167592227|gb|ABZ83975.1| preprotein translocase, secy subunit [Heliobacterium modesticaldum
Ice1]
Length = 422
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 218/440 (49%), Gaps = 35/440 (7%)
Query: 12 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 71
+S+++ ++ ++R ++ T ++ ++ RIG IP+PG +R +I Q S
Sbjct: 1 MSTLVGTLQNAWKLPDLRSKIIFTLMMFLVFRIGAHIPVPGINREVIEQLLNSGALFGFF 60
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
++ G+ S F + I+P I ASI+MQ+L ++PSL QL KEG +G +KI Y + +
Sbjct: 61 DVISGGSFRNFSVFAMSITPYINASIIMQLLTVVIPSLEQLAKEGEEGRKKITEYTRYFT 120
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+ A ++A+ ++ Y L ++ A+ S ++ A L G + + WI + I+E G G G
Sbjct: 121 ILLAFIQAIGLS-YGLKGAV--ANPSFAQYLLVATTLTAGTVFLMWIGERITEKGIGNGI 177
Query: 192 SLIICVGI---LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
SLII GI L TLY+ + +G++ + ++ TI + + ++EG R+
Sbjct: 178 SLIIFAGIVSRLPAGIATLYEYVR--VGTTNVLNVLLFLIIAGATIAGI--IYISEGQRR 233
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSP 307
+ + Y A +IP +N +G+ PV+ + +LA P+ +A+ GSP
Sbjct: 234 IPVNY-----AKRVVGRRVYGGQSTHIPLKVNQAGVIPVIFASSILALPTTIAAFFPGSP 288
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPN 365
Q ++ N + +++ YA + F F I P ++AD + K G IP
Sbjct: 289 VGQWFQQYFNFGS------FLHSAFYALLILFFTYFYTAITFNPVDVADNMKKYGGFIPG 342
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PGK T +Y+T++ + G L L++++ T + N F G T++LI VG
Sbjct: 343 LRPGKPTADYITRVMSRITLVGALFLAVISLLPTFVIMLTGITNIYF--GGTALLICVGV 400
Query: 426 IIE---------LRRSYQAY 436
++ L R YQ +
Sbjct: 401 ALDTMKQLESNMLMRHYQGF 420
>gi|159467437|ref|XP_001691898.1| preprotein translocase secY subunit [Chlamydomonas reinhardtii]
gi|158278625|gb|EDP04388.1| preprotein translocase secY subunit [Chlamydomonas reinhardtii]
Length = 451
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 203/425 (47%), Gaps = 29/425 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL-SFVSGSVDELGDFGAE 79
+ FF S++ ++L L+++SR+G +I LPG D + S + G +D L G+
Sbjct: 35 QEFFNSDLPKKLGGLLALLLLSRVGVYIRLPGVDVDAFAESLTNSGLLGYIDTLSG-GSI 93
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILE 138
K+ F LGI P I ASI++Q+ P L ++ R EG G K + Y ++ FAI++
Sbjct: 94 SKVGLFSLGIIPYINASIVLQLFSAAFPGLKKMQRDEGAQGRAKFQYYQKLMAFAFAIVQ 153
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
AV Y P+ S V ++ LV GAM + +I DTISE G G+S++I
Sbjct: 154 AVGQLFYIRPF---VDDFSPAWVAGSSTALVAGAMALVYIADTISELKLGNGTSVLIFAN 210
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGV-FTIVTMWAVVVTEGCRKVKLQYYGFK 257
I + L + QL+ + P + + V F + T+ + V E R++ + Y
Sbjct: 211 IAS----ALPASVGQLVAQNESDDPTNVAVFFVAFALTTLGIIYVQEAERRIPVNY---- 262
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 317
+ R S + Y+PF +N +G+ P++ + +LA P+ LA S + +
Sbjct: 263 ---SNRLSSGNLARQSYLPFKVNATGVMPLIFASSILALPTALARYTDSAALDEFSQSVG 319
Query: 318 PETSVGARPWVYYTIY--AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEY 375
P G +V + + FF + + + PK++A+ L K GA IP ++PGK T EY
Sbjct: 320 P----GGALYVPFNVALIVFFNYYYTFLQLE--PKDLAEQLKKTGAAIPAIRPGKQTAEY 373
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELRRSYQ 434
+T+ G + L L+ + ++ GF+ TSVLI+VG + R +
Sbjct: 374 VTRTLTRMSLLGSVFLGALSAAPAAVEAITHLTAFRGFA--GTSVLIMVGVATDTARRIR 431
Query: 435 AYNVM 439
A M
Sbjct: 432 AEQAM 436
>gi|415718735|ref|ZP_11467541.1| preprotein translocase subunit SecY [Gardnerella vaginalis 1500E]
gi|415727950|ref|ZP_11471553.1| preprotein translocase subunit SecY [Gardnerella vaginalis 6119V5]
gi|388059777|gb|EIK82495.1| preprotein translocase subunit SecY [Gardnerella vaginalis 1500E]
gi|388065476|gb|EIK87958.1| preprotein translocase subunit SecY [Gardnerella vaginalis 6119V5]
Length = 446
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 204/432 (47%), Gaps = 30/432 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++F E+R ++ +I+I RIG FIP+PG D ++I S + +G
Sbjct: 6 QAFRTKELRNKILFVFAMIIIYRIGSFIPIPGVDYKVISDCTTKLASSKENFIGLVNLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
G+ L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 66 GGSLLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLA 125
Query: 136 ILEA--VIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFG 188
+L++ ++V S Y + ++V ++ G + W+ + I++ G G
Sbjct: 126 VLQSTTILVTARSGALFNYQCGQVIPDGGFWSLVVMVLIMTGGTGLIMWMAELITDKGIG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
QG S++I + I +G+ L+ + GS W F + + GV ++ ++ V R+
Sbjct: 186 QGMSVLIFMSICSGFLPKLWDIGWGTNGSDGDWTKFSI-VGGVLLVILVFVDFVELAQRR 244
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI--LGS 306
+ +QY + S Y+P IN SG+ P + + +LA P+++A
Sbjct: 245 IPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAVPTLIAQFGDKSK 299
Query: 307 PFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 363
P+ Q ++ L TS W +Y + FF F + +I E AD + + G I
Sbjct: 300 PWVQWIENNLANSTSA----WYIALYTVMIVFFCFFYT--EITFNTDETADNMKEYGGFI 353
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++ G AT YL+ + G + L +A T+L L +N G T++LII
Sbjct: 354 PGIRAGSATSNYLSYVMNRLNTVGAIYLLFVALIPTVLIMAL-HLNTKLPFGGTTILIIA 412
Query: 424 GSIIELRRSYQA 435
G ++ R +A
Sbjct: 413 GVGLDTLRQAKA 424
>gi|418575476|ref|ZP_13139627.1| preprotein translocase subunit SecY [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379326096|gb|EHY93223.1| preprotein translocase subunit SecY [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 407
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 197/407 (48%), Gaps = 22/407 (5%)
Query: 38 LIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--AELKLSFFQLGISPQIVA 95
++VI +IG +IP PG + D G D L FG A S F +GI P I A
Sbjct: 1 MLVIFKIGTYIPAPGVNPAAF--DSQQGSQGVTDLLNTFGGGALKNFSIFAMGIMPYITA 58
Query: 96 SILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPY--SIY 152
SI+MQ+L IVP + K+G G +K+ + + ++ A ++++ +A Y
Sbjct: 59 SIVMQLLQMDIVPKFSEWAKQGDAGRKKLNNVTRYFAIVLAFIQSIGMAFQFNNYLKGQL 118
Query: 153 AASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLS 212
S+ ++ A +L G + W+ + I++ G G G S+II GIL+ +L +
Sbjct: 119 IMDQSILSYLLIAVVLTAGTAFLIWLGEQITQFGVGNGISIIIFAGILSSLPSSLIQFYQ 178
Query: 213 QLL---GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPIT 269
Q + W ++GL+ ++T+ A+ V + RK+ +QY K SA R S T
Sbjct: 179 QAFVGQDDTSMAWLKVIGLIIGMILLTVGAIYVLQAIRKIPIQYA--KKQSAQRLGSQAT 236
Query: 270 EVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QHVKEILNPETSVGARPWV 328
Y+P +N +G+ PV+ P L W Q V ++ NP ++G V
Sbjct: 237 ----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPDASWAQKVSDVANPSNNIGM--IV 290
Query: 329 YYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGG 388
Y + F + + + P+++AD L K G+ +P ++PG+ T +Y+T++ F G
Sbjct: 291 YVVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGEQTKKYITRVLYRLTFVGS 348
Query: 389 LLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
+ L+++A I + + + +G TS+LI++G IE +S +A
Sbjct: 349 IFLAVIAILPIIATKVM-SLPQSIQVGGTSLLIVIGVAIETMKSLEA 394
>gi|406907817|gb|EKD48524.1| hypothetical protein ACD_64C00264G0002 [uncultured bacterium]
Length = 440
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 207/431 (48%), Gaps = 23/431 (5%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG-----S 69
+L N F +++RR++ T ++++ RIG IP+ G D + + Q ++S SG S
Sbjct: 3 LLKNVLNIFKIADLRRKILFTFAVLIVYRIGNHIPVIGIDLQQL-QLFMSQKSGLGGLFS 61
Query: 70 VDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
++ G+ + + F LGI P I ASI+MQ+L +P+L QL KEG G + I Y +
Sbjct: 62 YLDMFSGGSLKQCTLFALGIMPYITASIMMQILSMSIPTLEQLSKEGEYGKKIINQYTRY 121
Query: 130 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
++LG +I+++ A Y + +M F L G++ + W+ + I+ G G
Sbjct: 122 LALGISIMQSFSYALVVENYGLVLDPGWAFRLMFM-FSLTIGSIVVMWLGEQIALHGIGS 180
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
GSS+II GI+ + + L Q + + L LL +F + V + +G RKV
Sbjct: 181 GSSMIIFAGIVARFPHDIITTL-QAVTDKIMDPVIALVLLAIFVGMAACIVFLEKGDRKV 239
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF- 308
+QY + YIPF IN +G+ PV+ + +L P +A+ L S F
Sbjct: 240 PVQYTRRIVGQRMYAGQ-----SSYIPFKINTAGIMPVIFSNAVLNVPLFVAAFLASRFT 294
Query: 309 -WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPN 365
++ + E L P VY I + F+ F A + P+E+A+ + K G IP
Sbjct: 295 LFKWISESLTPTG------LVYNAIDFVLIIFFSFFYTAMVYNPEELAENIKKGGGFIPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PGK T E+ + G + L LA + I+ LR ++ T +LI+VG
Sbjct: 349 IRPGKKTAEFFNYLLTRLGLVGAIYLGCLAIAPNIIYTLLRLPFYLSTLSGTGMLIMVGV 408
Query: 426 IIELRRSYQAY 436
+E ++Y
Sbjct: 409 ALETAAQVESY 419
>gi|402832960|ref|ZP_10881583.1| preprotein translocase, SecY subunit [Selenomonas sp. CM52]
gi|402281703|gb|EJU30329.1| preprotein translocase, SecY subunit [Selenomonas sp. CM52]
Length = 418
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 204/422 (48%), Gaps = 33/422 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E+R+++ T ++ + R+G IP+PG D I Q F +G++ L D GA K S
Sbjct: 13 ELRQKVIFTLIMFAVFRLGTHIPVPGVDPSAIEQ---LFATGNLFGLLDLFSGGAFSKFS 69
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F + I+P I ASI+MQ+L ++P+L Q KEG +GH+K ++++ A +AV ++
Sbjct: 70 IFAMSITPYINASIIMQLLTVVIPTLEQWSKEGQEGHKKTTKVTRYLTVALAFFQAVGMS 129
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
L +I + + +++ A L G + + WI + I+ +G G G SLII GI+
Sbjct: 130 I-GLKQAIL--NPNPVSILIIAITLTGGTIFLMWIGEQITANGVGNGISLIIFAGIVAAL 186
Query: 204 TETLYKMLSQLLGSSVRWW-PFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
+ L + S L ++ ++ F+ ++ + IV + + + EG R+V + Y +
Sbjct: 187 PKNLGTIYSYLQAGTISYFNAFVFAVIALLMIV--FVIYIQEGNRRVPISYAKRVVGKKT 244
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSV 322
S +IP +N +G+ P++ + +L FP +A + P W T
Sbjct: 245 YGGS-----SSHIPLKVNHAGVIPIIFASSVLMFPVTVAQFIEVP-WV--------TTLA 290
Query: 323 GARPW---VYYTIYAFFVFLFNIFDIANLPK--EIADYLNKMGARIPNVKPGKATIEYLT 377
G W + +IYA + F F A K ++A+ L K G IP ++PGK T EYL
Sbjct: 291 GYFAWGTPLQTSIYALLIIFFTYFYTAVTVKISDMAENLKKYGGFIPGIRPGKPTEEYLD 350
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYN 437
+ G L+ +A ++ EG G T++LI+VG + + ++
Sbjct: 351 TVMTRITLAGAFFLAFIAVLPNLVAGATHI--EGVYFGGTALLIVVGVALNTMKQIESMV 408
Query: 438 VM 439
VM
Sbjct: 409 VM 410
>gi|159028187|emb|CAO89794.1| secY [Microcystis aeruginosa PCC 7806]
Length = 439
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 131/431 (30%), Positives = 213/431 (49%), Gaps = 25/431 (5%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL +T L+V+ R G F+P+PG DR + + S + + +L
Sbjct: 10 TAQETFMQMAQAAGLRGRLLITLGLLVLLRFGMFVPIPGLDRARLAEIIQSNAALGILDL 69
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 132
G L F LGI P I ASI++Q+L +PSL L+K EG G KI +I+
Sbjct: 70 FTGGGLSTLGIFALGILPYINASIIVQLLTAALPSLEDLQKNEGEAGRRKIAQITRYIAF 129
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
G+AI++++ + L + + ++ + T LV G+M + WI + I+E G G G+S
Sbjct: 130 GWAIIQSIGI-TLGLLVANGVVAGTLPSIAATVLALVAGSMFVMWISELITERGLGNGAS 188
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
L+I V I+ +TL ++ + ++ LL VF ++ + V V EG R++
Sbjct: 189 LLIFVNIVAVLPKTLGDTITFAQQGGRQAIAQVVILLLVFLVMIIGIVFVQEGTRRI--- 245
Query: 253 YYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
+ SA R+ E Y+P +N G+ P++ + +L P L L P
Sbjct: 246 ----PIVSARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLVLPFQLVQAL--PTDN 299
Query: 311 HVKEILNPETSVGARP--WVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGARIPN 365
V ++L + RP W Y Y+ + F+ F I N PK+++ L KMG IP
Sbjct: 300 QVGQVLVQLVNA-LRPDSWGYVAFYSLLILGFSFFYASLIVN-PKDMSQNLKKMGTSIPG 357
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG AT YL + G L LS++AT T+++ + +G TS+LI+VG
Sbjct: 358 IRPGTATTNYLEGVLNRLTLLGALFLSLVATIPTLVESA-TGVTTFRGLGATSLLILVGV 416
Query: 426 IIELRRSYQAY 436
I+ + Q Y
Sbjct: 417 AIDTAKQIQTY 427
>gi|302782363|ref|XP_002972955.1| hypothetical protein SELMODRAFT_98540 [Selaginella moellendorffii]
gi|300159556|gb|EFJ26176.1| hypothetical protein SELMODRAFT_98540 [Selaginella moellendorffii]
Length = 424
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 205/429 (47%), Gaps = 47/429 (10%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF----- 76
FF+ ++ + + + +SR+G +IPLPG DR + SGS+ + F
Sbjct: 12 DFFRGKLPGKFLLLLGWLALSRVGTYIPLPGVDR--------AAFSGSMTDNSLFRTLDA 63
Query: 77 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISL 132
G +L LGI P I A IL Q+L + P L +L +KEG G +K+ Y + S+
Sbjct: 64 FSGGGIGRLGVCSLGIVPFINAQILFQLLGSLFPELERLQKKEGEAGRKKVLQYTRYASV 123
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
FAI +A+ Y PY A S+ + + LL GA+ S+I + IS+ G G+S
Sbjct: 124 AFAIFQAIGQVLYIRPY---ADDFSLGWIFTSISLLTIGAVLTSYIGERISDIKLGNGTS 180
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGV-FTIVTMWAVVVTEGCRKVKL 251
L+I I++ ++ + + Q L + LG +G+ F ++ + V V E R++ L
Sbjct: 181 LLIFTNIISSLPASVGRTIDQALKDANYAG---LGTIGLSFFLLVLGIVYVQESERRIPL 237
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
Y A+R + + Y+PF IN SG+ P++ +T LA S +A G+ + +
Sbjct: 238 NY-------ASRYSGGLQK-SAYLPFKINSSGVMPIIFSTSALALTSSVARFSGATGFNN 289
Query: 312 VKEILNPETSVGARPWVYY-----TIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNV 366
+ LNP S +Y + AFF + + + P +++D L + GA IP+V
Sbjct: 290 IVATLNPGGS-------FYLPTNAVLIAFFNYFYTFLQLD--PSDVSDQLKRQGASIPSV 340
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PGKAT ++ + L I+A S ++ +L + TS+LI+VG
Sbjct: 341 RPGKATAAFIETVLTRISVLDSTFLVIMAVSPAAVE-WLTHLTAFRGFAGTSILILVGCA 399
Query: 427 IELRRSYQA 435
+ R +A
Sbjct: 400 TDTARKVKA 408
>gi|390629535|ref|ZP_10257529.1| Preprotein translocase subunit SecY [Weissella confusa LBAE C39-2]
gi|390485171|emb|CCF29877.1| Preprotein translocase subunit SecY [Weissella confusa LBAE C39-2]
Length = 435
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 218/435 (50%), Gaps = 30/435 (6%)
Query: 12 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 71
L +VLN+ E +IR++LF T ++++ R+G +I +PG + + + S + GS+
Sbjct: 2 LKTVLNSLKEK----DIRKKLFFTLGILIVYRLGAYITVPGINTAALTEVANSGL-GSIL 56
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ G S F +G+SP + A I++Q+L IVP V+ K+G G K+ ++
Sbjct: 57 NMFSGGGLTNYSLFAMGVSPYVTAQIVVQLLQMDIVPRFVEWSKQGEVGRRKLNQVTRYL 116
Query: 131 SLGFAILEAV-IVACYS-LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
++ A ++++ I A ++ L + +++ ++ F+L G M W+ + I+E G G
Sbjct: 117 TIVLAFVQSIGITAGFNQLSQVNLVKTPNLETYLLIGFILTAGTMFAVWLGEMITERGLG 176
Query: 189 QGSSLIICVGILTGYTETLYKMLSQ--LLGSS-VRWWPFMLGLLGVFTIVTMWAVVVTEG 245
QG S++I GI+ +Y++ + L G R W F++G+L +F +V + +
Sbjct: 177 QGVSMLIFAGIIARVPAGVYQLFKEHVLQGDDPARGWAFLVGILLIFVLVIAFVTWFNQA 236
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
RK+ +QY + ++ + S Y+P IN +G+ PV+ + LL P +
Sbjct: 237 IRKIPMQYT--RRSTGSGNSS-------YLPLKINVAGVIPVIFASSLLVTPQTILQAFA 287
Query: 306 SPF-----WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
S F + + + L+ +T G VY + F F + + P+++A+ L K G
Sbjct: 288 SKFADAGWYNTLMQYLSMQTMQGG--IVYTLLIILFTFFYAFVQVN--PEKVAENLQKQG 343
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
+ I V PG+AT ++L+ + G L L +A + IL ++ ++ + TSVL
Sbjct: 344 SYIVGVWPGRATEKWLSGLLMRLSVVGALFLGFVALAP-ILATHIFGLDSNLGMSGTSVL 402
Query: 421 IIVGSIIELRRSYQA 435
I++G I+L R +
Sbjct: 403 IVIGVAIDLIRQLEG 417
>gi|153004793|ref|YP_001379118.1| preprotein translocase subunit SecY [Anaeromyxobacter sp. Fw109-5]
gi|152028366|gb|ABS26134.1| preprotein translocase, SecY subunit [Anaeromyxobacter sp. Fw109-5]
Length = 445
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 208/430 (48%), Gaps = 40/430 (9%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAE 79
F +E+R+RL T ++ + R+G ++ PG DR+ + Q+ +S SG++ L +F GA
Sbjct: 10 FKIAELRKRLLFTLGMLAVYRLGIYVTTPGVDRQAM-QNVVS--SGNLLGLLNFFSGGAF 66
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+LS F LGI P + ASI++Q+L +VP+L +L+KEG G KI Y ++++ A ++
Sbjct: 67 EQLSIFALGIMPYVSASIILQLLTVVVPALEKLQKEGELGRRKITQYTRYLTVVLAAIQG 126
Query: 140 VIVACY----SLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
+A Y P + A+ ++T L G + W+ + I+E G G G SLI
Sbjct: 127 YGIATYLETLRDPSGLSVVANPGWGFRLLTMISLAAGTSFIMWMGEQITERGVGNGISLI 186
Query: 195 ICVGILTGYTETLYKMLS--QLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
I GI+ + + GS + ++ LLG+ +V V V G R++ +Q
Sbjct: 187 IFAGIVARAPSAAWATFQGFRAPGSQMSELGLVI-LLGIMIVVIGAIVFVERGQRRIPIQ 245
Query: 253 Y----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
Y G KL ++P +N +G+ P + + LL FP+ L
Sbjct: 246 YAKRVVGRKLYGGQ---------STHLPLKVNTAGVIPPIFASSLLMFPATLGG------ 290
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNV 366
W + + ++ A W+Y +Y + F F A P ++AD L K G IP +
Sbjct: 291 W--IPALSQLSNALQAGSWIYNVLYIALIVFFAYFYTAVTFNPVDVADNLKKYGGYIPGI 348
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PGK T +Y+ + + F G + L+ + TIL + N F G TS+LI+VG
Sbjct: 349 RPGKKTADYIDYVLSRITFGGAIYLAAVCVLPTILTN---EFNINFYFGGTSLLIVVGVA 405
Query: 427 IELRRSYQAY 436
++ + + +
Sbjct: 406 LDTVQQIEGH 415
>gi|256390256|ref|YP_003111820.1| preprotein translocase subunit SecY [Catenulispora acidiphila DSM
44928]
gi|256356482|gb|ACU69979.1| preprotein translocase, SecY subunit [Catenulispora acidiphila DSM
44928]
Length = 449
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 204/446 (45%), Gaps = 38/446 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF-DRRLIPQDYLSFVSGSVDE------L 73
+F E+R++L T ++ + R G IPLPG R L S SG+ + L
Sbjct: 7 RAFRTPELRKKLLFTLAIMAVYRFGAHIPLPGVATRNLATCTGASSTSGTGSQAFGLLNL 66
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
GA L+LS F LGI+P I ASI++Q+L +VP L L+KEG G KI Y ++++G
Sbjct: 67 FSGGAFLQLSIFALGITPYITASIILQLLTVVVPRLEALKKEGQAGQAKITQYTRYLTIG 126
Query: 134 FAILEAVIVACYSLPYSIYAASHSVKHVMV---------TAFLLVCGAMTMS---WICDT 181
++LE+ + + Y + V V TA +++ S W+ +
Sbjct: 127 LSVLESTMTLTAARNNPGYLLGQRCQGVQVFYPTVTWEGTAVMVIIMTAATSLLMWLGEL 186
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
+++ G G G S+++ I + +L+ + +L ++ WP +L + ++ V
Sbjct: 187 VTDRGVGNGMSVLMFTSIAARFPGSLWAI--KLSSHTLNGWPVFFAVLALGVLIVAAVVF 244
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
V +G R++ +QY + A YIP +N G+ PV+ + LL P +L
Sbjct: 245 VEQGQRRIPVQYTKRMIGRRAYGGG-----STYIPLKLNQPGVVPVIFASSLLQMPVMLV 299
Query: 302 SILG----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADY 355
+ G + WQ N T+V P Y Y + F F I EIAD
Sbjct: 300 GLTGGTTATKGWQGWIN-RNLTTTVHGYPLTYTLSYLLLILGFAFFYMSITFDTVEIADN 358
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
+ K G IP ++ G+ TIEYL + + G L L+++A I LR F G
Sbjct: 359 MKKYGGFIPGIRSGRPTIEYLNYVATRITWPGALYLAVIAAIPMIALDGLRA-TASFPFG 417
Query: 416 FTSVLIIVG----SIIELRRSYQAYN 437
T++LI+VG ++ ++ Q +N
Sbjct: 418 GTTILIMVGVGLETVKQIESQLQQHN 443
>gi|407010032|gb|EKE25040.1| hypothetical protein ACD_5C00316G0003 [uncultured bacterium]
Length = 423
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 208/439 (47%), Gaps = 36/439 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQD----YLSFV 66
+L + F +E+R ++ ++V+ RI +PLPG D RRL + L+
Sbjct: 1 MLEKLTQIFKVTELRNKILFILGILVVFRIAANVPLPGVDMEQLRRLFEGNQFLGMLNVF 60
Query: 67 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKS 125
SG G +S LG+ P I ASI+MQ+L IVP + Q+ ++EG G +K
Sbjct: 61 SG--------GGLTNISIVMLGVGPYITASIIMQLLTMIVPRVEQIYKEEGEAGRQKFNM 112
Query: 126 YIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 185
+ W+++ A L+ + + + + M+ + G + + W+ + I+E
Sbjct: 113 WTRWLTVPLAALQTFSMVALLRSQGVLQVTSTFDIAMIVV-IATAGTVFLMWLGELITEK 171
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G G SLII GI++G + K+ L S + + + +GL+ V I V+VTEG
Sbjct: 172 GIGNGVSLIIFAGIVSGLPSGISKLF--LTFDSTQIFTY-IGLIAVTVITIAGVVMVTEG 228
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
R + + Y A R D ++P +N +G+ P++ ++ FP ++A+ L
Sbjct: 229 QRNIPVSY-----AKRIRGDKTYGGASSHLPLRVNQAGVIPIIFAMSIMLFPGMIATFL- 282
Query: 306 SPFWQHVKEILNPETSVGA--RPWVYYT-IYAFFVFLFNIFDIANL--PKEIADYLNKMG 360
I N T V + V+Y+ +Y + LF F A + P +I++ L K G
Sbjct: 283 --MKASNATIANGATFVNNLFQNQVFYSSLYFILIVLFTYFYTAVVFDPVKISENLQKQG 340
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
IP ++PGK T +YL KI G L L ++A I+ L I + +G TS+L
Sbjct: 341 GYIPGIRPGKTTADYLYKIMNRITLTGALFLGLIAVLPFIVQG-LSGI-QSLQVGGTSIL 398
Query: 421 IIVGSIIELRRSYQAYNVM 439
I+V +IE + ++ VM
Sbjct: 399 IVVSVVIETIKQIESQLVM 417
>gi|367470178|ref|ZP_09469894.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Patulibacter
sp. I11]
gi|365814756|gb|EHN09938.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Patulibacter
sp. I11]
Length = 425
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 211/434 (48%), Gaps = 40/434 (9%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDELGDF--- 76
+F EIR+++ +L+ + RIG IP+PG + Q+ SF G +L +
Sbjct: 8 AFTVPEIRKKIGFALLLLALYRIGAQIPVPGVSSEGVKALQESASFQGGGALQLLNVFSG 67
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA +++ F LGI P I ASI++Q+L +VPSL +L++EG G ++I Y ++++ A
Sbjct: 68 GALSQIAIFALGIMPYITASIVLQLLQVVVPSLEKLKQEGEIGQQRITQYTRYLTVALAA 127
Query: 137 LEAVIVACYSLPYSIYAA-----SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+++ S A + + HV + A L GAM + W+ + I++ G G G
Sbjct: 128 GQSIAYVFLFKSLSGQAGEPLITNFNAGHVFMIAVSLTAGAMIVMWMGELITQRGIGNGM 187
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SL+I I++G L +S S + + ++ L + I + V + EG R++ +
Sbjct: 188 SLMIFASIVSG----LPSGVSNWWQSGDQVFKVLMPFLALAVIAAV--VFIQEGQRRIPI 241
Query: 252 QY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
QY G +++ + Y+P +N + + PV+ +++ P +A +
Sbjct: 242 QYAKRVIGRRMSGGG---------QTYLPLKVNMANVIPVIFAASIMSIPPTIAQFVTKD 292
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPN 365
V+E+ A W Y F+ LF F A P E AD L K G IP
Sbjct: 293 PSNSVQELFR------AGGWAYIGGETIFIILFTYFYTAVTFNPVEQADNLKKYGGFIPG 346
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
V+PG+ T E+L ++ A F G L L+ +A +IL + +GF+ G TS+LI+VG
Sbjct: 347 VRPGRPTAEFLDRVLARLTFPGALYLAAVAALPSIL---FNQTTQGFAFGGTSLLIVVGV 403
Query: 426 IIELRRSYQAYNVM 439
++ + +A +M
Sbjct: 404 ALDTVKQIEAQLMM 417
>gi|218779742|ref|YP_002431060.1| preprotein translocase subunit SecY [Desulfatibacillum alkenivorans
AK-01]
gi|218761126|gb|ACL03592.1| preprotein translocase, SecY subunit [Desulfatibacillum
alkenivorans AK-01]
Length = 435
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 216/459 (47%), Gaps = 52/459 (11%)
Query: 15 VLNNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE- 72
++ ++ FK E++RR+ +TA L+ + RIG IP PG D + +F + D
Sbjct: 1 MVGGGFQNIFKIPELKRRVLITAGLLAVYRIGVHIPTPGVDGNALA----AFFAAHQDTI 56
Query: 73 LGDF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 127
LG F GA +LS F LGI P I ASI++Q+L ++P L +L KEG G +KI Y
Sbjct: 57 LGLFDMFSGGALERLSVFALGIMPYISASIILQLLTVVIPHLERLSKEGDAGRKKITQYT 116
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAASHSV-----KHVMVTAFLLVCGAMTMSWICDTI 182
+ ++ +I++ +A L +A V ++T L G + W+ +TI
Sbjct: 117 RYGTVLLSIIQGFGIAV-GLEQMASSAGEIVPVGGWSFRIMTVITLTAGTAFIMWLGETI 175
Query: 183 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI----VTMW 238
+E G G G SLII GI+ + K ++ L+G+ G LGVFT+ + M
Sbjct: 176 TERGIGNGISLIIFAGIVARGPAAVSKTIT-LIGA---------GTLGVFTVAGLAIFMV 225
Query: 239 AVV-----VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYL 293
AV+ V R++ +QY K R+ + ++P IN SG+ P + + L
Sbjct: 226 AVIGLIIFVETAQRRIPVQYA--KRVVGRRQYG---GQKTHLPLKINQSGVIPPIFASSL 280
Query: 294 LAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKE 351
+ FP+ +A G E L P T + P+V F+F F F A P +
Sbjct: 281 MMFPATIAQFSGIEALNKFAEWLTPGTGIWEIPYVA------FIFFFCYFYTAVTFNPVD 334
Query: 352 IADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEG 411
+AD L K G IP V+PGK T +Y+ K+ G + +S + T L +
Sbjct: 335 VADNLKKYGGYIPGVRPGKRTADYIDKVLTRITLGGAIYVSAVCVMPTAL---MVMFKVP 391
Query: 412 FSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRYG 450
F G T++LI+VG ++ +++ + L++ G
Sbjct: 392 FYFGGTALLIVVGVALDTIAQMESHMITRHYEGFLKKGG 430
>gi|385850432|ref|YP_005896947.1| preprotein translocase subunit SecY [Neisseria meningitidis
M04-240196]
gi|325205255|gb|ADZ00708.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M04-240196]
Length = 436
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 210/438 (47%), Gaps = 22/438 (5%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 253
I GI +G + K+++ S+ + + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
K R S T ++PF +N +G+ P + + ++ FPS L GS V
Sbjct: 242 A--KRQFNGRAGSQNT----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSADTNSVL 295
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
+ G +Y ++A V F F A + PKE+A+ L K GA +P ++PG+
Sbjct: 296 HKIAGLLQHGQ--LLYMALFAVTVIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQ 353
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIELR 430
T YL K+ +G L + T+ ++ +L + N F +G TS+LI+V ++
Sbjct: 354 TSRYLEKVVLRLTLFGALYI----TTICLIPEFLTTVLNVPFYLGGTSLLILVVVTMDFS 409
Query: 431 RSYQAYNVMPSLSKALRR 448
+Y + K + R
Sbjct: 410 TQINSYRLTQQYDKLMTR 427
>gi|302823445|ref|XP_002993375.1| hypothetical protein SELMODRAFT_187415 [Selaginella moellendorffii]
gi|300138806|gb|EFJ05560.1| hypothetical protein SELMODRAFT_187415 [Selaginella moellendorffii]
Length = 503
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 205/429 (47%), Gaps = 47/429 (10%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF----- 76
FF+ ++ + + + +SR+G +IPLPG DR + SGS+ + F
Sbjct: 91 DFFRGKLPGKFLLLLGWLALSRVGTYIPLPGVDR--------AAFSGSMTDNSLFRTLDA 142
Query: 77 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISL 132
G +L LGI P I A IL Q+L + P L +L +KEG G +K+ Y + S+
Sbjct: 143 FSGGGIGRLGVCSLGIVPFINAQILFQLLGSLFPELERLQKKEGEAGRKKVLQYTRYASV 202
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
FAI +A+ Y PY A S+ + + LL GA+ S+I + IS+ G G+S
Sbjct: 203 AFAIFQAIGQVLYIRPY---ADDFSLGWIFTSISLLTIGAVLTSYIGERISDIKLGNGTS 259
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGV-FTIVTMWAVVVTEGCRKVKL 251
L+I I++ ++ + + Q L + LG +G+ F ++ + V V E R++ L
Sbjct: 260 LLIFTNIISSLPASVGRTIDQALKDANYAG---LGTIGLSFFLLVLGIVYVQESERRIPL 316
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
Y A+R + + Y+PF IN SG+ P++ +T LA S +A G+ + +
Sbjct: 317 NY-------ASRYSGGLQK-SAYLPFKINSSGVMPIIFSTSALALTSSVARFSGATGFNN 368
Query: 312 VKEILNPETSVGARPWVYY-----TIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNV 366
+ LNP S +Y + AFF + + + P +++D L + GA IP+V
Sbjct: 369 IVATLNPGGS-------FYLPTNAVLIAFFNYFYTFLQLD--PSDVSDQLKRQGASIPSV 419
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PGKAT ++ + L I+A S ++ +L + TS+LI+VG
Sbjct: 420 RPGKATAAFIETVLTRISVLDSTFLVIMAVSPAAVE-WLTHLTAFRGFAGTSILILVGCA 478
Query: 427 IELRRSYQA 435
+ R +A
Sbjct: 479 TDTARKVKA 487
>gi|145300915|ref|YP_001143756.1| preprotein translocase subunit SecY [Aeromonas salmonicida subsp.
salmonicida A449]
gi|411011158|ref|ZP_11387487.1| preprotein translocase subunit SecY [Aeromonas aquariorum AAK1]
gi|418362589|ref|ZP_12963216.1| preprotein translocase subunit SecY [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|423199213|ref|ZP_17185796.1| preprotein translocase subunit secY [Aeromonas hydrophila SSU]
gi|423204912|ref|ZP_17191468.1| preprotein translocase subunit secY [Aeromonas veronii AMC34]
gi|142853687|gb|ABO92008.1| preprotein translocase subunit SecY [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356686170|gb|EHI50780.1| preprotein translocase subunit SecY [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|404625788|gb|EKB22603.1| preprotein translocase subunit secY [Aeromonas veronii AMC34]
gi|404629567|gb|EKB26314.1| preprotein translocase subunit secY [Aeromonas hydrophila SSU]
Length = 442
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 201/436 (46%), Gaps = 30/436 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++ RL I++ R G ++P+PG D ++ + + G++ E+ + GA +
Sbjct: 16 SELKSRLLFVLGAIIVFRAGSYVPIPGIDAAVLAELFQQ-QKGTIIEMFNMFSGGALSRA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y W +L +A+ +
Sbjct: 75 SILALGIMPYISASIIIQLLTVVHPALAELKKEGESGRRKISQYTRWGTLVLGTFQAIGI 134
Query: 143 ACYSLPYSIYA-ASHSVKHVMVTAFL-LVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A LP + +H TA + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 135 AT-GLPNMMQGLVTHPGLGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + Q + +L L VF VT + V V G R++ + Y A
Sbjct: 194 AGLPHAIGATAEQARQGELHILLLLLLGLIVFA-VTYFVVFVERGQRRIVVNY-----AK 247
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQHVKE 314
+ ++P +N +G+ P + + ++ FP + S G + Q V
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPAIFASSIILFPGTITSWFGQGEGKVADILQQVSM 307
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKAT 372
+L P +P +Y +YA + F F A + P+E AD L K GA IP ++PG+ T
Sbjct: 308 VLQP-----GQP-LYEMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQT 361
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
Y+ K+ G L ++ + L + N F G TS+LIIV I++
Sbjct: 362 ARYIDKVMTRLTLAGALYITFICLVPQFL---MTAWNVQFYFGGTSLLIIVVVIMDFMAQ 418
Query: 433 YQAYNVMPSLSKALRR 448
Q + + LR+
Sbjct: 419 VQTHMMSHQYGDVLRK 434
>gi|347543055|ref|YP_004857693.1| preprotein translocase subunit SecY [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346986092|dbj|BAK81767.1| preprotein translocase, SecY subunit [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 424
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 214/428 (50%), Gaps = 26/428 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L NA F ++R+R+F T ++++ R+G FIP+PG + + Q + + G D +
Sbjct: 4 ILGNA---FKVKDLRKRIFFTLFIVIVFRLGNFIPVPGVNTESLKQLTSTGLFGFYDLIS 60
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA + S F LG+ P I +SI++Q+L +P QL KEG +G +K+++ ++S+
Sbjct: 61 G-GALERFSIFALGVVPYINSSIIVQLLSMSIPKFEQLSKEGEEGRKKLQNITRYLSIVL 119
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMV-TAFLLVCGAMTMSWICDTISESGFGQGSSL 193
+ ++A Y L + A +++ M+ F LV ++ + WI D +S G G G SL
Sbjct: 120 SFVQA--YGSYFLILNAGAITNNSMFSMIFVVFTLVAASVFLVWIGDQVSLHGIGNGVSL 177
Query: 194 IICVGILTGYTETLYKMLSQLLGSS----VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
I V I++ + T++ + L S + F+L +G+ +W + +T R++
Sbjct: 178 FIFVNIVSRF-PTMFIQIGALNKSGEVGFIETVIFVLVAIGLL----IWTIYMTLAERRI 232
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 309
+QY G +LA + + + + +IPF+I S + ++ T +L FP+ + + + W
Sbjct: 233 TVQYAGKQLAGSNKNN------KAHIPFSITGSAVIAIIFATSVLQFPATIGTFFSADSW 286
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVK 367
+ + + +Y ++A + F F + P E+A+ +NK IP ++
Sbjct: 287 INKVLVNGTYSPFRINSLLYTIVFALLIVFFTWFYTQVTYKPDEMAENMNKSSGFIPGIR 346
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PG+ T +Y+ + GG+ +ILA +D + +G G T +LI++ + +
Sbjct: 347 PGEPTAKYIENVLDKISILGGIFGAILALFPIFMDLFTPF--KGLQFGGTMLLILISTSV 404
Query: 428 ELRRSYQA 435
+ R ++
Sbjct: 405 DTMRQIES 412
>gi|291533607|emb|CBL06720.1| protein translocase subunit secY/sec61 alpha [Megamonas hypermegale
ART12/1]
Length = 395
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 197/406 (48%), Gaps = 33/406 (8%)
Query: 43 RIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLSFFQLGISPQIVASILM 99
R+G IP+PG + +I Q F SG++ L D GA K S F + I+P I ASI++
Sbjct: 6 RLGTHIPVPGVNPSVIEQ---LFNSGNLFGLLDLFSGGALSKFSLFAMSITPYINASIII 62
Query: 100 QVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVK 159
Q+L +VP+L Q KEG +GH+KI ++++ A L+A+ S+ + S+
Sbjct: 63 QLLTVVVPTLEQWSKEGEEGHKKITKTTRYLTVVLAFLQAI---GMSIGLKQAIINPSIT 119
Query: 160 HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSV 219
+++ A L G + + WI + I+ G G G SLII GI+ + L + + L ++
Sbjct: 120 SILIIAITLTAGTVFLMWIGEQITAHGVGNGISLIIFAGIVAALPQNLGTIYNYLQAGTI 179
Query: 220 RWWPFMLGLLGVFTIVTMWAVV----VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYI 275
++ + F I+ + +V + +G R+V + Y A +I
Sbjct: 180 SYFNVLF-----FAIIALAMIVFVIAIQQGQRRVPVSY-----AKRVVGRKTYGGQSTHI 229
Query: 276 PFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAF 335
P +N +G+ P++ + +L FP+ LA + +P+ + + + T + +YA
Sbjct: 230 PLKVNQAGVIPIIFASSVLMFPATLAQFVQTPWIKTIADYFQWGTPFQS------AVYAL 283
Query: 336 FVFLFNIFDIANLPK--EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSI 393
+ F F A K ++AD L K G IP ++PG+AT +YL +I G L+
Sbjct: 284 LILFFTYFYTAVTFKIPDLADNLKKYGGFIPGIRPGQATADYLDRIMTRITLAGAFFLAF 343
Query: 394 LATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
+A T++ EG G T++LI+VG ++ + ++ VM
Sbjct: 344 IAILPTMIAGATHI--EGIHFGGTALLIVVGVALDTMKQIESMVVM 387
>gi|53803437|ref|YP_114768.1| preprotein translocase subunit SecY [Methylococcus capsulatus str.
Bath]
gi|53757198|gb|AAU91489.1| preprotein translocase, SecY subunit [Methylococcus capsulatus str.
Bath]
Length = 441
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 208/442 (47%), Gaps = 35/442 (7%)
Query: 26 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
+E+R+RL FV LIV RIG IP+PG D + + + S +D + F GA +L
Sbjct: 16 TELRQRLLFVVGALIVF-RIGAHIPIPGVDPKALAAMFNQQGSSILDMVNMFSGGALKRL 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q++ +VP L QL+KEG G +KI Y + ++ A +A V
Sbjct: 75 SIFALGIMPYISASIILQLMTIVVPKLEQLKKEGESGRKKINQYTRYATVVLASFQATGV 134
Query: 143 ACYSLPYSIYAA----SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A S A S + V +TA LV G M + W+ + ++E G G G S+II G
Sbjct: 135 AMALQNQSAGGAPIVVSPGFQFVALTAISLVTGTMFLMWLGEQVTERGLGNGISIIIFAG 194
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFK 257
I+ G + L L + F + + + W VV V +G R++ + Y
Sbjct: 195 IVAGLPSAVGGTLE--LARTGELGAFSIIGIAAIAVAVTWLVVFVEKGQRRITINY---- 248
Query: 258 LASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP---FW-QH 311
A R++ + ++P +N SG+ P + + ++ FP+ LA G+ W Q
Sbjct: 249 ---AKRQEGRRMYAAQKSFLPLKLNMSGVIPPIFASSIILFPATLAGWFGNSEKLIWLQD 305
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 369
+ L+P +P +Y YA + F F A + E A+ L K GA IP ++PG
Sbjct: 306 IASTLSP-----GQP-LYVLCYAAAIMFFCFFYAALVFNSNETAENLKKSGAFIPGIRPG 359
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
+ T Y+ + GG+ ++ + L Y N F G TS+LIIV +++
Sbjct: 360 QQTARYVDTVMTRLTLIGGIYITAVCLLPEFLIVYW---NVPFYFGGTSLLIIVVVVMDF 416
Query: 430 RRSYQAYNVMPSLSKALRRYGV 451
Q Y + L++ +
Sbjct: 417 MAQIQTYVISQQYEGLLKKTNI 438
>gi|254805794|ref|YP_003084015.1| preprotein translocase subunit SecY [Neisseria meningitidis
alpha14]
gi|254669336|emb|CBA08387.1| preprotein translocase SecY subunit [Neisseria meningitidis
alpha14]
Length = 436
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 210/438 (47%), Gaps = 22/438 (5%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 253
I GI +G + K+++ S+ + + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
K R S T ++PF +N +G+ P + + ++ FPS L GS V
Sbjct: 242 A--KRQFNGRAGSQYT----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSADTNSVL 295
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
+ G +Y ++A V F F A + PKE+A+ L K GA +P ++PG+
Sbjct: 296 HKIAGLLQHGQ--LLYMALFAATVIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQ 353
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIELR 430
T YL K+ +G L + T+ ++ +L + N F +G TS+LI+V ++
Sbjct: 354 TSRYLEKVVLRLTLFGALYI----TTICLIPEFLTTVLNVPFYLGGTSLLILVVVTMDFS 409
Query: 431 RSYQAYNVMPSLSKALRR 448
+Y + K + R
Sbjct: 410 TQINSYRLTQQYDKLMTR 427
>gi|117621057|ref|YP_854863.1| preprotein translocase subunit SecY [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|334702744|ref|ZP_08518610.1| preprotein translocase subunit SecY [Aeromonas caviae Ae398]
gi|117562464|gb|ABK39412.1| preprotein translocase, SecY subunit [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 442
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 201/436 (46%), Gaps = 30/436 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++ RL I++ R G ++P+PG D ++ + + G++ E+ + GA +
Sbjct: 16 SELKSRLLFVLGAIIVFRAGSYVPIPGIDAAVLAELFQQ-QKGTIIEMFNMFSGGALSRA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y W +L +A+ +
Sbjct: 75 SILALGIMPYISASIIIQLLTVVHPALAELKKEGESGRRKISQYTRWGTLVLGTFQAIGI 134
Query: 143 ACYSLPYSIYA-ASHSVKHVMVTAFL-LVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A LP + +H TA + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 135 AT-GLPNMMQGLVTHPGLGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + Q + +L L VF VT + V V G R++ + Y A
Sbjct: 194 AGLPHAIGATAEQARQGELHILLLLLLGLIVFA-VTYFVVFVERGQRRIVVNY-----AK 247
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQHVKE 314
+ ++P +N +G+ P + + ++ FP + S G + Q V
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPAIFASSIILFPGTITSWFGQGEGKIADILQQVSM 307
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKAT 372
+L P +P +Y +YA + F F A + P+E AD L K GA IP ++PG+ T
Sbjct: 308 VLQP-----GQP-LYEMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQT 361
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
Y+ K+ G L ++ + L + N F G TS+LIIV I++
Sbjct: 362 ARYIDKVMTRLTLAGALYITFICLVPQFL---MTAWNVQFYFGGTSLLIIVVVIMDFMAQ 418
Query: 433 YQAYNVMPSLSKALRR 448
Q + + LR+
Sbjct: 419 VQTHMMSHQYGDVLRK 434
>gi|157363462|ref|YP_001470229.1| preprotein translocase subunit SecY [Thermotoga lettingae TMO]
gi|157314066|gb|ABV33165.1| preprotein translocase, SecY subunit [Thermotoga lettingae TMO]
Length = 429
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 218/441 (49%), Gaps = 48/441 (10%)
Query: 18 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
A ++ FK E+R R+ T +++ R+G +IP+PG + + + + F + + F
Sbjct: 3 KALQNAFKIPELRNRILFTVATLIVFRLGIYIPIPGINIQAWGEAFKRFGESAAGGILSF 62
Query: 77 ------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
GA S F + ++P I ASI++Q+L ++P L L +EG +G +K Y +
Sbjct: 63 YDVFTGGALENFSIFAMSVTPYINASIVLQLLSSVIPKLRDLLREGEEGRKKFAQYTRNL 122
Query: 131 SLGFAILEAVIVACYSL----PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
++ ++ IV+ +SL P + + M++ ++ G M + W+ D I+E G
Sbjct: 123 TVILGAFQSFIVS-FSLVRQNPDIVSYGLNPFAFTMISTISMLAGTMFLLWLGDRITERG 181
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEG 245
G G S++I GI+ Y ++L L ++ W F++ V ++VT+ +V V +
Sbjct: 182 IGNGISILIFAGIVARYPNYFGRILLGRL--NIFGWIFLI----VVSLVTIAGIVYVQQA 235
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
R++ +QY AS YIP +N G+ P++ + ++ P+ +A + G
Sbjct: 236 ERRINIQY-----ASRVTGRRIYGGASTYIPVKVNQGGVIPIIFASAIIMIPAAIAQMAG 290
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFN------IFDIANLPKEIADYLNKM 359
W+ ++ IL P + +Y IY VF F +FD P ++++ + K
Sbjct: 291 ---WETLRRILGPGS------LLYVVIYGLLVFFFTYFYSVVVFD----PHDVSENVRKY 337
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTS 418
G IP ++PGK+T EY+ +I F G L L ++A +L H ++ + N +G TS
Sbjct: 338 GGFIPGIRPGKSTEEYIQRIINRVTFMGALFLVLIA----LLPHLVQAVTNVDIIVGGTS 393
Query: 419 VLIIVGSIIELRRSYQAYNVM 439
LI VG +++ + +A+ +M
Sbjct: 394 TLIAVGVALDVVQQMEAHLIM 414
>gi|326332211|ref|ZP_08198491.1| preprotein translocase, SecY subunit [Nocardioidaceae bacterium
Broad-1]
gi|325949917|gb|EGD41977.1| preprotein translocase, SecY subunit [Nocardioidaceae bacterium
Broad-1]
Length = 436
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 206/436 (47%), Gaps = 37/436 (8%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
A +F ++R++L +++VI R G IP PG + Q + +G L +
Sbjct: 6 ASAFRTPDLRKKLLFVLLIVVIFRAGSQIPAPGVHVANVQQCLDAAQTGDSAGLYNLVNL 65
Query: 77 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
GA L+L+ F LGI P I ASI++Q+L ++P L +L+KEG G KI Y +++LG
Sbjct: 66 FSGGALLQLTIFALGIMPYITASIILQLLVVVIPRLERLKKEGQSGQTKITQYTRYLTLG 125
Query: 134 FAILEAV-IVACYSLPYSIYAASHSVKHVMVTAFLLV------CGAMTMSWICDTISESG 186
A+L+A IVA + + + H TA LV G + W+ + I+E G
Sbjct: 126 LAVLQATGIVALARSGDLLQGCTQPLLHDDGTATFLVMVVTMTAGTAVIMWLGELITERG 185
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEG 245
G G S++I ++ + T++ + + WW F + + V + M AV+ + +
Sbjct: 186 IGNGMSILIFTQVVATFPATMWA-----VKNDKGWWTFAIVI--VIGLAIMAAVIFIEQA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA---- 301
R++ +QY + S YIP +N +G+ PV+ + LL P++ A
Sbjct: 239 QRRIPVQYARRMVGRKMFGGS-----STYIPLKVNQAGVIPVIFASSLLYLPAMAAQFNQ 293
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKM 359
+ P W + +N G P VY Y + F F I P E+AD + K
Sbjct: 294 NAQNPPAW---VDWINTYFVRGDHP-VYMATYFALIIFFTYFYVSITFNPPEVADNMKKY 349
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G IP ++ GK T +YL+ + + G L L ++A ++ L N+ F G TS+
Sbjct: 350 GGFIPGIRAGKPTEDYLSYVLSRITLPGSLYLGLVALIP-LIALALINANQNFPFGGTSI 408
Query: 420 LIIVGSIIELRRSYQA 435
LI+VG ++ + ++
Sbjct: 409 LIMVGVALDTVKQIES 424
>gi|189501191|ref|YP_001960661.1| preprotein translocase subunit SecY [Chlorobium phaeobacteroides
BS1]
gi|189496632|gb|ACE05180.1| preprotein translocase, SecY subunit [Chlorobium phaeobacteroides
BS1]
Length = 441
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 210/431 (48%), Gaps = 38/431 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP---QDYLSFVSGSVDELGDFGAELKLS 83
E+R+R+ T +L+ I RIG I LPG D + Q + + + G D L GA + S
Sbjct: 15 ELRQRILYTLLLLFIYRIGSHITLPGVDAAAVSGASQTHANDLFGLFD-LFVGGAFARAS 73
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA--VI 141
F LGI P I ASI++Q+L + P +L+KEG DG +KI Y + ++ A L+A V
Sbjct: 74 IFSLGIMPYISASIIIQLLGAVTPYFQKLQKEGEDGRQKINQYTRYGTVLIASLQAWGVS 133
Query: 142 VACYSLPYS---IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
V+ S P S I + +L + + W+ + I+ESG G G SLII +G
Sbjct: 134 VSLAS-PASFGRIVVPDPGLFFQFSAVVILTASTLFIMWLGEKITESGIGNGISLIIMIG 192
Query: 199 ILTGYTETLYKMLSQL-LGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY---- 253
IL + ++L + LGS + W + +LG+ + VV+T G R++ +Q+
Sbjct: 193 ILARFPQSLIAEFQSVSLGS--KNWIIEVIILGLMVAIVAAVVVLTVGTRRIPVQHAKRV 250
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHV 312
G K+ + YIP +N +G+ P++ ++ PS S S Q V
Sbjct: 251 VGRKMYGGGTQ---------YIPMRVNTAGVMPIIFAQSIMFLPSTFVSFFPESEIMQGV 301
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGK 370
+ ++ W Y ++ + F F IA PKE+AD + K G IP V+PGK
Sbjct: 302 ARVFAYDS------WWYAVMFGSMIVFFTYFYTAIAFNPKEVADTMRKQGGFIPGVRPGK 355
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--IGFTSVLIIVGSIIE 428
+T +++ I G + L+ +A T L + + GF+ G TS+LIIVG ++
Sbjct: 356 STADFIDNILTRITLPGAISLAFIAVLPTFLTKF-ANVTPGFAQFFGGTSLLIIVGVGLD 414
Query: 429 LRRSYQAYNVM 439
+ +++ +M
Sbjct: 415 TLQQIESHLLM 425
>gi|162456226|ref|YP_001618593.1| preprotein translocase subunit SecY [Sorangium cellulosum So ce56]
gi|161166808|emb|CAN98113.1| preprotein translocase SecY subunit [Sorangium cellulosum So ce56]
Length = 442
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 199/422 (47%), Gaps = 31/422 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E+RRR+ T V++ + R+G F+ PG DR + Q Y++ SG + + GA LS
Sbjct: 15 ELRRRVIFTLVMLAVYRVGVFVTTPGVDRNAMRQ-YVAKQSGGLLSFFNMFSGGALENLS 73
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI+MQ++ + + +LRKEG G +I Y + ++ ++ +A +A
Sbjct: 74 IFALGIMPYISASIIMQLMGMVYKPIDELRKEGEQGRRRIDQYTRYGTVALSLFQAFSIA 133
Query: 144 --CYSLPYSIYAA---SH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
L S A +H + ++T L G + WI + I+E G G SL+I
Sbjct: 134 KMLEGLSSSETGAGIVNHPGIGFQLMTVITLTTGTAFLMWIGEQITERGVSNGVSLLIFA 193
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGF 256
I+T E + +Q G P + + F + + + E G R++ + Y
Sbjct: 194 SIVTRIPEEIGNYFAQNAGD---LQPLTMAAIVAFIVFVIAVIAFFENGRRQIPIVYSRR 250
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
++ ++P +N SG P + + LL FP LA+ + P + ++ I+
Sbjct: 251 QVGRRVYGGQ-----TAHLPLKVNTSGTIPPIFASSLLMFPQTLAN-MNVPGAEQIQAII 304
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIE 374
N WV+ T YA + F F ++ P ++A+ L K A IP ++PGK T +
Sbjct: 305 NRGD------WVFNTGYALLIIFFCFFYTNVTFQPVDVAENLKKQQANIPGIRPGKQTAD 358
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ ++ G L ++ + +I+ + LR F G TS++I+VG ++ +
Sbjct: 359 YIHRVIQRITVGGALYVAAVCVVPSIVGNLLR---VPFGFGGTSLMIVVGVALDTVNQLE 415
Query: 435 AY 436
A+
Sbjct: 416 AH 417
>gi|319639569|ref|ZP_07994316.1| preprotein translocase SECY subunit [Neisseria mucosa C102]
gi|317399140|gb|EFV79814.1| preprotein translocase SECY subunit [Neisseria mucosa C102]
Length = 437
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 208/417 (49%), Gaps = 22/417 (5%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
++++RL +V+ RIG IP+PG D + + Y +G L F G+ + S
Sbjct: 15 DLKKRLVFLLGALVVFRIGAHIPVPGVDAVALAKLYEGAANGIFGMLNMFSGGSLERFSI 74
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
F +GI P I +SI++Q+ I+PSL L+KEG G + I Y + ++ A+L++ VA
Sbjct: 75 FAIGIMPYISSSIIVQLASEIIPSLKALKKEGEAGRKIITKYTRYGTVLLAVLQSFGVAT 134
Query: 145 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 204
+ + S S++ + T LV G M + W+ + I+E G G G SLII GI++G
Sbjct: 135 FVYQQGVVVTS-SLEFHISTVVCLVTGTMFLMWLGEQITERGIGNGISLIITAGIVSGIP 193
Query: 205 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAAR 263
+ ++L+ S+ + ++G+ +V +AVV E RKV + Y + S
Sbjct: 194 SGIVRLLTLTEQGSMSMLMAVSIVIGILLLV--YAVVYFESAQRKVPVHYAKRQFGSGMM 251
Query: 264 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSV- 322
I ++PF +N +G+ P + + ++ FPS L GS IL+ ++
Sbjct: 252 PGQSI-----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGS---NSTNSILHKVAAML 303
Query: 323 -GARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKI 379
+P +Y ++A + F F A + PKE+A+ L K GA +P ++PG+ T YL K+
Sbjct: 304 QHGQP-LYIVLFATTIIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQTSRYLEKV 362
Query: 380 QASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+G L ++ T I + +N F +G TS+LI+V ++ R +Y
Sbjct: 363 VLRLTLFGALYIT---TICLIPEFLTTALNVPFYLGGTSLLILVVVTMDFRTQINSY 416
>gi|407642080|ref|YP_006805839.1| preprotein translocase subunit SecY [Nocardia brasiliensis ATCC
700358]
gi|407304964|gb|AFT98864.1| preprotein translocase subunit SecY [Nocardia brasiliensis ATCC
700358]
Length = 440
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 200/426 (46%), Gaps = 39/426 (9%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-------EL 73
+F ++RR++ T LI + R+G +P PG D + + Q+ + VSG D L
Sbjct: 7 SAFRTPDLRRKILFTLGLIALYRLGAALPSPGVDYKAV-QECVKQVSGGEDAGIYQLINL 65
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
GA L+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+
Sbjct: 66 FSGGALLQLSVFAIGIMPYITASIIIQLLTVVIPRFEELRKEGQSGQTKMTQYTRYLSIA 125
Query: 134 FAILEAV-IVACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
AIL+A +VA S + A + + +++ ++ GA + W + I+E G
Sbjct: 126 LAILQATGLVALASRGQLLQGCQKDIIADNGIFAMIIIVLVMTAGAALVMWFGEQITERG 185
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEG 245
G G SL+I GI +L G + GL+ V + AV+ V +G
Sbjct: 186 IGNGMSLLIFAGIAARIPTEGKSILDSRGG-------LVFGLVCVAAFAIIVAVIFVEQG 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
R++ +QY + S Y+P +N +G+ PV+ + LL P+++A +
Sbjct: 239 QRRIPVQYAKRVVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLVAQLTS 293
Query: 306 S-----PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNK 358
+ P W +I+N P VY IY + F F +A P+E AD + K
Sbjct: 294 ARNNPDPSWWQ--DIINKYLVSPGNP-VYIAIYFGLIVFFTYFYVAITFNPEERADEMKK 350
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI-LDHYLRRINEGFSIGFT 417
G IP +PGK T +YL + + G + L ++A + LD + G T
Sbjct: 351 FGGFIPGYRPGKPTADYLNFVLSRITLPGSIYLGLVAVLPNLFLDIGASANTQNLPFGGT 410
Query: 418 SVLIIV 423
+VLI+V
Sbjct: 411 AVLIMV 416
>gi|89898702|ref|YP_515812.1| preprotein translocase subunit SecY [Chlamydophila felis Fe/C-56]
gi|89332074|dbj|BAE81667.1| preprotein translocase SecY chain [Chlamydophila felis Fe/C-56]
Length = 457
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 219/456 (48%), Gaps = 39/456 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 76
+ F +E+R++LF T L+ R+G FIP+PG + + + S + +L D
Sbjct: 6 QIFSIAELRQKLFFTFALLAACRVGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +PS+ + +E D G KI ++G
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLLVFMPSIQREMRESPDQGKRKIGRLTRLFTVGL 125
Query: 135 AILEAVIVACY------SLPYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A + S+P + S K M T ++ G + + WI +
Sbjct: 126 AFIQSLLFAKFALKMNMSIPGIVLPTLLSSKLFGGPWIFYMTTVIVMTTGTLLLMWIGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 237
IS+ G G G SLII +GIL + L ++++L LGS S +L L +F V +
Sbjct: 186 ISDKGIGNGVSLIISLGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCFIFVFVLV 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
+++ EG RK+ +QY + RE I Y+P +N +G+ PV+ + LL FP
Sbjct: 246 TTILIIEGVRKIPVQYA--RRVIGRRE---IPGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 298 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIA 353
+ + + S + + + +L+P WVY Y + F F A P++IA
Sbjct: 301 ATIGQFMSSDSSWLKRIAMMLSPGG------WVYSLCYVLLIIFFTYFWTATQFHPEQIA 354
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGF 412
+ K A IP ++ GK T YL G + L+++A +IL L N +
Sbjct: 355 SEMKKNNAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVIAILPSILGRVLHVDANVSY 414
Query: 413 SIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+G T++LI+VG +++ + A+ +M L++
Sbjct: 415 FLGGTAMLIVVGVVLDTMKQVDAFLLMRRYDSFLKK 450
>gi|42524357|ref|NP_969737.1| preprotein translocase subunit SecY [Bdellovibrio bacteriovorus
HD100]
gi|39576566|emb|CAE80730.1| preprotein translocase SecY subunit [Bdellovibrio bacteriovorus
HD100]
Length = 442
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 212/437 (48%), Gaps = 32/437 (7%)
Query: 18 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
+A ES K S++R+R+ T L+ I RIG +P PG D + + + G F
Sbjct: 2 SAIESIAKNSDLRKRILFTLALLAIYRIGVHVPTPGVDGSAVLSFFQAQSQGIFGLFNTF 61
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA + S F LGI P I +SI+ Q+L +P L L+KEG G KI Y + ++
Sbjct: 62 TGGALSQFSIFALGIMPYISSSIIFQLLTSAIPYLEALKKEGEQGRRKINQYTRYATVAL 121
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFL---------LVCGAMTMSWICDTISES 185
AI++ ++ + L S H + AFL L G + W+ + I+E
Sbjct: 122 AIIQGYGISTW-LMNSTSPDGHPLVIAPTVAFLPFQIMTIITLTAGTCFIMWLGEQITER 180
Query: 186 GFGQGSSLIICVGI---LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 242
G G G+SLII GI + G + L++++ +R+ ++ LL F + + AV+
Sbjct: 181 GIGNGTSLIIFTGIAAAIPGGAQQLWELVRT---GEMRFA--LVLLLVAFMVAIIAAVIY 235
Query: 243 TE-GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
E R++ +QY + + T ++P +N SG+ P + + LL FP+ +A
Sbjct: 236 MEVAQRRITVQYSQRQGGGGMQSMQTPTS---HLPIKLNISGVIPPIFASSLLMFPATMA 292
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGA 361
+ +P+ + +++ LNP ++ ++ + FF F + +I P ++A+ L K G
Sbjct: 293 QFVNTPWLKALQDSLNPSGAI--FNIMFVALIVFFSFFYT--EIVFNPNDVAENLKKYGG 348
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
+P V+ GK+T +Y+ ++ G + L + I+ + + N F G TS+LI
Sbjct: 349 FVPGVRAGKSTADYIQRVLERVNVVGCIYLCTICILPGIM---VSQFNVPFQFGGTSLLI 405
Query: 422 IVGSIIELRRSYQAYNV 438
+VG ++ + Q++ +
Sbjct: 406 LVGVALDTAQQIQSHMI 422
>gi|374852385|dbj|BAL55319.1| preprotein translocase subunit SecY [uncultured Chlorobi bacterium]
Length = 451
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 205/429 (47%), Gaps = 30/429 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
E+R+R+ T ++++ RIG I LPG D + Q + ++ L D GA
Sbjct: 15 EELRQRILFTLGVLIVVRIGSHIALPGVDVYALEQVSGLGMDSTLFGLYDLFVGGAFSNA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
+ F LGI P I ASI++Q+ ++P + +L++EG +G KI Y ++++ A L+A V
Sbjct: 75 AIFALGIMPYISASIILQLAAAVIPEVQRLQREGEEGRRKINQYTRYLTVLIAALQAWGV 134
Query: 143 ACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ + V H + + G + + W+ + I+E G G G SLI+ +
Sbjct: 135 SIKLTSMQVPNGGPVVPHPGLGFTLSAIVFMTAGTIFLMWLGEQITERGIGNGISLILFI 194
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY---- 253
GI+ L + + QL+ R W + +L + + V VT+G R++ +QY
Sbjct: 195 GIIARLPVALAQEI-QLISVGSRLWVTDVIILALLAAIVTAVVYVTQGIRRIPVQYARRV 253
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
G K+ + Y+P +N +G+ P++ +L P+ + + F+ +
Sbjct: 254 VGRKVYGGTTQ---------YLPLRVNTAGVMPIVFAQAILFIPATIYT-----FFPESR 299
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
+ N R ++Y +Y+ + F F A + P+E+AD + K G IP ++PG
Sbjct: 300 FLENMAALFSERSFIYALVYSAMIVFFAYFYTAIVFNPREVADTIKKQGGFIPGIRPGAP 359
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS-IGFTSVLIIVGSIIELR 430
T EY+ ++ G L L+++A + + L +E S G TS+LI+VG ++
Sbjct: 360 TAEYIDRVLTRITLPGALFLAVIAILPVFVHNVLSVPSELASFFGGTSLLIVVGVALDTL 419
Query: 431 RSYQAYNVM 439
+ ++Y +M
Sbjct: 420 QQIESYLLM 428
>gi|329893619|ref|ZP_08269753.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [gamma
proteobacterium IMCC3088]
gi|328923546|gb|EGG30858.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [gamma
proteobacterium IMCC3088]
Length = 443
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 212/435 (48%), Gaps = 32/435 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
E+ RL V ++I RIG IP+PG D + Q + G++ L + GA ++
Sbjct: 16 GELFARLRFVLVALIIYRIGTHIPVPGIDPAQL-QALFNSNQGTILGLANMFSGGALERM 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA--- 139
S LGI P I ASI+MQ++ + PSL QL+KEG G KI Y ++++G AI++A
Sbjct: 75 SILALGIMPYISASIIMQLMSAVTPSLEQLKKEGESGRRKISQYTRYLTVGLAIIQATGM 134
Query: 140 -VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
V +A + YS+ + + +T+ LV GA+ M W+ + I+E G G G SL+I G
Sbjct: 135 TVGMANQGMAYSVSPVFYVIA---ITS--LVTGAIFMMWLGEQITERGVGNGISLLIFAG 189
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ G + + L Q + +LG+L + +V + + G R++ + Y
Sbjct: 190 IVAGLPSAIGQSLEQARQGELNIL-VLLGILALAIVVIYLIIFIERGQRRITVNY----- 243
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG----SPFWQHVKE 314
A R + ++P +N +G+ P + + +L FP+ +A G S + Q +
Sbjct: 244 AKQQRGNRMYQAQSSHLPLKVNMAGVIPAIFASSILLFPASIAQWFGSGNSSDWLQDLAV 303
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
+ P + + + ++ F + +F+ P E++D L + GA IP ++PG+ T
Sbjct: 304 AIGPGQPLNILLFTVFIVFFCFFYTALMFN----PVEVSDNLKRSGAFIPGIRPGQQTAN 359
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIELRRSY 433
++ + +G ++++ +L +L N F +G TS+LI+V +++
Sbjct: 360 FIDGVLTRLTVFGAAYIALVC----LLPQFLVVTWNVPFYLGGTSLLIVVVVVMDFMAQV 415
Query: 434 QAYNVMPSLSKALRR 448
Q++ + +++
Sbjct: 416 QSHMMSQQYDSVMKK 430
>gi|329938212|ref|ZP_08287663.1| preprotein translocase, SecY subunit [Streptomyces
griseoaurantiacus M045]
gi|329302701|gb|EGG46591.1| preprotein translocase, SecY subunit [Streptomyces
griseoaurantiacus M045]
Length = 437
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 208/439 (47%), Gaps = 32/439 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T +IV+ R+G IP+PG D + + Q + G+ G
Sbjct: 1 MLTGFARAFRTPDLRKKLLFTLAIIVVYRVGTHIPIPGVDYKSV-QTCIDVAKGNQGLFG 59
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 130 ISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICD 180
+++ AIL+ + + +++ S+ + + G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGALFTGCPVATSIVPDQSIFMTITMVITMTAGTCMVMWLGE 179
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I++ G G G S+++ + I + L+ + +Q GS W ++ V ++ V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKTQ--GSLADGWIEFGTVILVGLVMVGLVV 237
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 292
Query: 301 ASILGS-PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYL 356
A S W K + G P VY T+Y + F F +A N P+E+AD +
Sbjct: 293 AQFSDSNSGW---KTWIQANMVKGDHP-VYITLYFLLIVFFAFFYVAISFN-PEEVADNM 347
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G
Sbjct: 348 KKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALVGFGA-NQNFPFGG 406
Query: 417 TSVLIIVGSIIELRRSYQA 435
TS+LIIVG +E + ++
Sbjct: 407 TSILIIVGVGLETVKQIES 425
>gi|15676089|ref|NP_273220.1| preprotein translocase subunit SecY [Neisseria meningitidis MC58]
gi|121634036|ref|YP_974281.1| preprotein translocase subunit SecY [Neisseria meningitidis FAM18]
gi|161870898|ref|YP_001600075.1| preprotein translocase subunit SecY [Neisseria meningitidis 053442]
gi|218767148|ref|YP_002341660.1| preprotein translocase subunit SecY [Neisseria meningitidis Z2491]
gi|304388963|ref|ZP_07371010.1| preprotein translocase subunit SecY [Neisseria meningitidis ATCC
13091]
gi|385323311|ref|YP_005877750.1| preprotein translocase subunit SecY [Neisseria meningitidis 8013]
gi|385339205|ref|YP_005893077.1| preprotein translocase subunit SecY [Neisseria meningitidis G2136]
gi|385342797|ref|YP_005896668.1| preprotein translocase subunit SecY [Neisseria meningitidis
M01-240149]
gi|385852371|ref|YP_005898885.1| preprotein translocase subunit SecY [Neisseria meningitidis H44/76]
gi|385854341|ref|YP_005900854.1| preprotein translocase subunit SecY [Neisseria meningitidis
M01-240355]
gi|385856310|ref|YP_005902822.1| preprotein translocase subunit SecY [Neisseria meningitidis
NZ-05/33]
gi|416159253|ref|ZP_11605718.1| preprotein translocase, SecY subunit [Neisseria meningitidis N1568]
gi|416167757|ref|ZP_11607724.1| preprotein translocase, SecY subunit [Neisseria meningitidis
OX99.30304]
gi|416176342|ref|ZP_11609592.1| preprotein translocase, SecY subunit [Neisseria meningitidis M6190]
gi|416186108|ref|ZP_11613557.1| preprotein translocase, SecY subunit [Neisseria meningitidis M0579]
gi|416189994|ref|ZP_11615474.1| preprotein translocase, SecY subunit [Neisseria meningitidis
ES14902]
gi|416194743|ref|ZP_11617460.1| preprotein translocase, SecY subunit [Neisseria meningitidis CU385]
gi|416199861|ref|ZP_11619501.1| preprotein translocase, SecY subunit [Neisseria meningitidis
961-5945]
gi|416211562|ref|ZP_11621431.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M01-240013]
gi|418289619|ref|ZP_12901884.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM220]
gi|421539357|ref|ZP_15985519.1| preprotein translocase, SecY subunit [Neisseria meningitidis 93004]
gi|421553911|ref|ZP_15999862.1| preprotein translocase, SecY subunit [Neisseria meningitidis 98008]
gi|421564490|ref|ZP_16010289.1| preprotein translocase, SecY subunit [Neisseria meningitidis
NM3081]
gi|421907633|ref|ZP_16337508.1| preprotein translocase SecY subunit [Neisseria meningitidis
alpha704]
gi|427826445|ref|ZP_18993496.1| preprotein translocase, SecY subunit [Neisseria meningitidis
H44/76]
gi|433464155|ref|ZP_20421649.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM422]
gi|433487360|ref|ZP_20444539.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M13255]
gi|433489534|ref|ZP_20446673.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM418]
gi|433504210|ref|ZP_20461155.1| preprotein translocase, SecY subunit [Neisseria meningitidis 9506]
gi|433506215|ref|ZP_20463134.1| preprotein translocase, SecY subunit [Neisseria meningitidis 9757]
gi|433508475|ref|ZP_20465361.1| preprotein translocase, SecY subunit [Neisseria meningitidis 12888]
gi|433510432|ref|ZP_20467275.1| preprotein translocase, SecY subunit [Neisseria meningitidis 4119]
gi|433535763|ref|ZP_20492283.1| preprotein translocase, SecY subunit [Neisseria meningitidis 77221]
gi|7225380|gb|AAF40620.1| preprotein translocase SecY subunit [Neisseria meningitidis MC58]
gi|120865742|emb|CAM09471.1| preprotein translocase SecY subunit [Neisseria meningitidis FAM18]
gi|121051156|emb|CAM07427.1| preprotein translocase SECY subunit [Neisseria meningitidis Z2491]
gi|161596451|gb|ABX74111.1| preprotein translocase SECY subunit [Neisseria meningitidis 053442]
gi|254670759|emb|CBA07026.1| preprotein translocase SecY subunit [Neisseria meningitidis
alpha153]
gi|254672689|emb|CBA06579.1| preprotein translocase SecY subunit [Neisseria meningitidis
alpha275]
gi|261391698|emb|CAX49147.1| preprotein translocase SecY subunit [Neisseria meningitidis 8013]
gi|304337097|gb|EFM03284.1| preprotein translocase subunit SecY [Neisseria meningitidis ATCC
13091]
gi|316985688|gb|EFV64634.1| preprotein translocase, SecY subunit [Neisseria meningitidis
H44/76]
gi|325129081|gb|EGC51930.1| preprotein translocase, SecY subunit [Neisseria meningitidis N1568]
gi|325131052|gb|EGC53776.1| preprotein translocase, SecY subunit [Neisseria meningitidis
OX99.30304]
gi|325133074|gb|EGC55746.1| preprotein translocase, SecY subunit [Neisseria meningitidis M6190]
gi|325137220|gb|EGC59815.1| preprotein translocase, SecY subunit [Neisseria meningitidis M0579]
gi|325139052|gb|EGC61598.1| preprotein translocase, SecY subunit [Neisseria meningitidis
ES14902]
gi|325141175|gb|EGC63675.1| preprotein translocase, SecY subunit [Neisseria meningitidis CU385]
gi|325143252|gb|EGC65591.1| preprotein translocase, SecY subunit [Neisseria meningitidis
961-5945]
gi|325145359|gb|EGC67636.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M01-240013]
gi|325197449|gb|ADY92905.1| preprotein translocase, SecY subunit [Neisseria meningitidis G2136]
gi|325199375|gb|ADY94830.1| preprotein translocase, SecY subunit [Neisseria meningitidis
H44/76]
gi|325203003|gb|ADY98457.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M01-240149]
gi|325203282|gb|ADY98735.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M01-240355]
gi|325207199|gb|ADZ02651.1| preprotein translocase, SecY subunit [Neisseria meningitidis
NZ-05/33]
gi|372203232|gb|EHP16940.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM220]
gi|393291302|emb|CCI73505.1| preprotein translocase SecY subunit [Neisseria meningitidis
alpha704]
gi|402321937|gb|EJU57408.1| preprotein translocase, SecY subunit [Neisseria meningitidis 93004]
gi|402333947|gb|EJU69242.1| preprotein translocase, SecY subunit [Neisseria meningitidis 98008]
gi|402346087|gb|EJU81191.1| preprotein translocase, SecY subunit [Neisseria meningitidis
NM3081]
gi|432205965|gb|ELK61980.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM422]
gi|432226125|gb|ELK81858.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M13255]
gi|432230530|gb|ELK86205.1| preprotein translocase, SecY subunit [Neisseria meningitidis NM418]
gi|432243593|gb|ELK99104.1| preprotein translocase, SecY subunit [Neisseria meningitidis 9506]
gi|432244231|gb|ELK99726.1| preprotein translocase, SecY subunit [Neisseria meningitidis 9757]
gi|432250126|gb|ELL05524.1| preprotein translocase, SecY subunit [Neisseria meningitidis 12888]
gi|432250500|gb|ELL05893.1| preprotein translocase, SecY subunit [Neisseria meningitidis 4119]
gi|432276774|gb|ELL31829.1| preprotein translocase, SecY subunit [Neisseria meningitidis 77221]
Length = 436
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 210/438 (47%), Gaps = 22/438 (5%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 253
I GI +G + K+++ S+ + + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
K R S T ++PF +N +G+ P + + ++ FPS L GS V
Sbjct: 242 A--KRQFNGRAGSQNT----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSADTNSVL 295
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
+ G +Y ++A V F F A + PKE+A+ L K GA +P ++PG+
Sbjct: 296 HKIAGLLQHGQ--LLYMALFAATVIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQ 353
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIELR 430
T YL K+ +G L + T+ ++ +L + N F +G TS+LI+V ++
Sbjct: 354 TSRYLEKVVLRLTLFGALYI----TTICLIPEFLTTVLNVPFYLGGTSLLILVVVTMDFS 409
Query: 431 RSYQAYNVMPSLSKALRR 448
+Y + K + R
Sbjct: 410 TQINSYRLTQQYDKLMTR 427
>gi|254494701|ref|ZP_05107872.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae 1291]
gi|268602348|ref|ZP_06136515.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae PID18]
gi|226513741|gb|EEH63086.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae 1291]
gi|268586479|gb|EEZ51155.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae PID18]
Length = 436
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 210/438 (47%), Gaps = 22/438 (5%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 253
I GI +G + K+++ S+ +L + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALLIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
K R S T ++PF +N +G+ P + + ++ FPS L GS V
Sbjct: 242 A--KRQFNGRAGSQNT----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSADTNSVL 295
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
+ G +Y ++A V F F A + PKE+A+ L K GA +P ++PG+
Sbjct: 296 HKIAGLLQHGQ--LLYMALFAATVIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQ 353
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIELR 430
T YL K+ +G + T+ ++ +L + N F +G TS+LI+V ++
Sbjct: 354 TSRYLEKVVLRLTLFGAFYI----TTICLIPEFLTTVLNVPFYLGGTSLLILVVVTMDFS 409
Query: 431 RSYQAYNVMPSLSKALRR 448
+Y + K + R
Sbjct: 410 TQINSYRLTQQYDKLMTR 427
>gi|330827903|ref|YP_004390855.1| Preprotein translocase subunit secY [Aeromonas veronii B565]
gi|406674841|ref|ZP_11082033.1| preprotein translocase subunit secY [Aeromonas veronii AMC35]
gi|423203651|ref|ZP_17190219.1| preprotein translocase subunit secY [Aeromonas veronii AER39]
gi|423211425|ref|ZP_17197958.1| preprotein translocase subunit secY [Aeromonas veronii AER397]
gi|328803039|gb|AEB48238.1| Preprotein translocase subunit secY [Aeromonas veronii B565]
gi|404612429|gb|EKB09490.1| preprotein translocase subunit secY [Aeromonas veronii AER39]
gi|404613505|gb|EKB10526.1| preprotein translocase subunit secY [Aeromonas veronii AER397]
gi|404628349|gb|EKB25131.1| preprotein translocase subunit secY [Aeromonas veronii AMC35]
Length = 442
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 199/436 (45%), Gaps = 30/436 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++ RL I++ R G ++P+PG D ++ + + G++ E+ + GA +
Sbjct: 16 SELKSRLLFVLGAIIVFRAGSYVPIPGIDAAVLAELFQQ-QKGTIIEMFNMFSGGALSRA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y W +L +A+ +
Sbjct: 75 SILALGIMPYISASIIIQLLTVVHPALAELKKEGESGRRKISQYTRWGTLVLGTFQAIGI 134
Query: 143 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A LP ++ + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 135 AT-GLPNMMHGLVTNPGLGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + Q + +L L VF VT + V V G R++ + Y A
Sbjct: 194 AGLPHAIGATAEQARQGELHILLLLLLGLIVFA-VTYFVVFVERGQRRIVVNY-----AK 247
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQHVKE 314
+ ++P +N +G+ P + + ++ FP + S G + Q V
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPAIFASSIILFPGTITSWFGQGEGKVADILQQVSM 307
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKAT 372
+L P +P +Y +YA + F F A + P+E AD L K GA IP ++PG+ T
Sbjct: 308 VLQP-----GQP-LYEMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQT 361
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
Y+ K+ G L ++ + L + N F G TS+LIIV I++
Sbjct: 362 ARYIDKVMTRLTLAGALYITFICLVPQFL---MTAWNVQFYFGGTSLLIIVVVIMDFMAQ 418
Query: 433 YQAYNVMPSLSKALRR 448
Q + + LR+
Sbjct: 419 VQTHMMSHQYGDVLRK 434
>gi|206900395|ref|YP_002250720.1| preprotein translocase, SecY subunit [Dictyoglomus thermophilum
H-6-12]
gi|206739498|gb|ACI18556.1| preprotein translocase, SecY subunit [Dictyoglomus thermophilum
H-6-12]
Length = 419
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 215/448 (47%), Gaps = 44/448 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+ + +F ++R+++ T + + R+G IP+PG DR + + S G++ L
Sbjct: 1 MFDTLLRAFRIPDLRKKILFTLFIFAVYRLGAHIPVPGVDRVALANLFRS--QGALGFLD 58
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
F GA + S F +GI P I ASI+M++L + PSL +L+KE DG +K+ Y +S+
Sbjct: 59 LFTGGALARFSIFSMGIIPFINASIMMELLTAVFPSLAELKKEE-DGRKKLTRYARNLSV 117
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
A +EA + + + + S S +V+ + L G+ + W+ + IS+ G G G S
Sbjct: 118 LLAAIEAFGLTIFMHNFKV-IPSLSPLYVVSSVITLTAGSTFIMWLGEQISQYGIGNGVS 176
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV---------T 243
L+I I+ + L + + L G +GV ++ +A+++
Sbjct: 177 LLILTSIVARFPTDLARTFALL----------SRGEIGVLNVIAFFALLILIIIGVVWEE 226
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
R++ +QY + Y+P +N +G+ P++ +L P +
Sbjct: 227 SAERRIPVQYSRRIVGRRVYGGQ-----STYLPLKLNQAGVIPIIFAITILMVPQTFIPV 281
Query: 304 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFN--IFDIANLPKEIADYLNKMGA 361
+ + + I +P + + P +Y+ + F + ++ +FD P ++A+ K G
Sbjct: 282 VKIGWLKAFLSIFSPSSVL--YPIIYFLLVLGFTYFYSSIVFD----PADLAENFKKYGG 335
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSV 419
IP V+PGK T EYL + F+GG+ L I+A +L ++ RI F +G TS+
Sbjct: 336 FIPGVRPGKPTEEYLQRTLNRLNFFGGVFLGIIA----LLPTFIERITGVTEFQLGGTSI 391
Query: 420 LIIVGSIIELRRSYQAYNVMPSLSKALR 447
LI+VG I+E ++ +A +M S LR
Sbjct: 392 LIMVGVILETIKALEAQMIMKSYEGFLR 419
>gi|427417936|ref|ZP_18908119.1| protein translocase subunit secY/sec61 alpha [Leptolyngbya sp. PCC
7375]
gi|425760649|gb|EKV01502.1| protein translocase subunit secY/sec61 alpha [Leptolyngbya sp. PCC
7375]
Length = 440
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 207/411 (50%), Gaps = 46/411 (11%)
Query: 47 FIPLPGFDRRLIPQDYLS---------FVSGSVDELGDFGAELKLSFFQLGISPQIVASI 97
+IP+PG DR Q + FV G + LG F LGI P I ASI
Sbjct: 43 YIPVPGIDRVAFSQQVDAGGLLGFLDIFVGGGLSLLG---------IFALGILPYINASI 93
Query: 98 LMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASH 156
+MQ+L +P L L+K EG G KI ++++G+A+L++ ++A + L S +A
Sbjct: 94 IMQLLTAAIPQLEDLQKNEGEAGRRKISQITRYVAMGWAVLQSTLLASFLL--SPFANEP 151
Query: 157 SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLS--QL 214
+ ++ TA L G+M + W+ + I+E G G G+SL+I + I++ L ++ Q
Sbjct: 152 GILFIVETAVALTAGSMFVMWVGELITERGVGNGASLLIFLNIVSSLPRLLNSAVTVAQS 211
Query: 215 LGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEP- 273
SS + ++ + V+ + + V V EG R++ + SA R+ +E
Sbjct: 212 PTSSRQEVAGIIVVSLVYLAMVVGIVFVQEGMRRIPI-------VSARRQVGRKLYLEKS 264
Query: 274 -YIPFNINPSGMQPVLTTTYLLAFP----SILASILGSPFWQHVKEILNPETSVGARPWV 328
Y+P +N G+ P++ + +L P +AS L +P + + +N S G+ P
Sbjct: 265 NYLPLRLNQGGVMPIIFASAILVLPLQAAPYIASTLSNP---GISDFVNRFLSPGSPP-- 319
Query: 329 YYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFW 386
Y +Y + F+ F + P++++ L KMGA IP ++PGKAT +++ K+ F
Sbjct: 320 YNLMYLVMILFFSYFYASLVVDPEDMSRNLKKMGASIPGIRPGKATSDFIGKVLNRLTFL 379
Query: 387 GGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
G L L ++A ++++ LR + +G +G TS+LI+VG I+ + Q Y
Sbjct: 380 GALFLGVVAVVPSMVESGLRVTVFQG--LGATSLLILVGVAIDTAKQIQTY 428
>gi|317125852|ref|YP_004099964.1| protein translocase subunit secY/sec61 alpha [Intrasporangium
calvum DSM 43043]
gi|315589940|gb|ADU49237.1| protein translocase subunit secY/sec61 alpha [Intrasporangium
calvum DSM 43043]
Length = 440
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 207/442 (46%), Gaps = 47/442 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---- 76
+F ++R +L T +IV+ R+G +P PG L+ Q+ L+ S D F
Sbjct: 7 RAFRTPDLRNKLLFTLSIIVLFRLGSHLPTPGVSYPLV-QNCLASRDASGDAASGFLNLA 65
Query: 77 -----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
GA L+LS F LGI P I ASI++Q+L ++P +L+KEG G K+ Y +++
Sbjct: 66 NLFSGGALLQLSVFALGIMPYITASIIVQLLTVVIPRFEELKKEGQAGTTKMTQYTRYLT 125
Query: 132 LGFAILEAVIVACYSL-PYSIYAAS-------HSVKHVMVTAFLLVCGAMTMSWICDTIS 183
+G A+L++ + ++ P +++ + S +++ + G + W+ + I+
Sbjct: 126 IGLAVLQSSTLVTFARNPSTLFGPACDNILVDSSFVTILIMVLTMTAGTGLIMWLGELIT 185
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVV 241
+ G G G SL+I + I + + L+ + + W LG LLG+F I + V
Sbjct: 186 DRGVGNGMSLLIFLSIASSFPRALWAIKDN------QGWGTFLGVILLGLFVIAAV--VF 237
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
V + R++ +QY + + YIP +N + + PV+ L+A P ++A
Sbjct: 238 VEQSQRRIPVQYAKRMVGRRMYGGT-----STYIPLKVNMANVIPVIFAASLMALPGMIA 292
Query: 302 SI-----LGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIA 353
P W Q V+ L + G P VY IY + F F I P E+A
Sbjct: 293 QFNTDPTQTPPLWVQWVQTNL----TKGDHP-VYMIIYTALIIFFTFFYVSITFNPTEVA 347
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS 413
D + K G IP ++ G+ T EYL + G L L+I++ I + ++ F
Sbjct: 348 DNMKKYGGFIPGIRAGRPTAEYLNYVITRITVPGALYLAIVSLIPLIAIAAIGA-DQNFP 406
Query: 414 IGFTSVLIIVGSIIELRRSYQA 435
G TS+LIIVG +E + +A
Sbjct: 407 FGGTSILIIVGVGLETVKQIEA 428
>gi|54022761|ref|YP_117003.1| preprotein translocase subunit SecY [Nocardia farcinica IFM 10152]
gi|54014269|dbj|BAD55639.1| putative preprotein translocase subunit [Nocardia farcinica IFM
10152]
Length = 440
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 201/427 (47%), Gaps = 43/427 (10%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-------ELG 74
+F ++RR++ T L+ + R G +P PG D + + Q+ + VSG + L
Sbjct: 8 AFRTPDLRRKILFTLGLVALYRAGASLPSPGVDYKAV-QECVDLVSGGENAGIYQLINLF 66
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+
Sbjct: 67 SGGALLQLSVFAIGIMPYITASIIIQLLTVVIPRFEELRKEGQSGQTKMTQYTRYLSIAL 126
Query: 135 AILEAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
AIL+A + + + A S+ +++ ++ GA + W + I+E G
Sbjct: 127 AILQATGLVALAARGQLLQGCQQDILADTSIFGMIIIVLVMTAGAALVMWFGEQITERGV 186
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G G SL+I GI T K + G V F L + F I+ + + V +G R
Sbjct: 187 GNGMSLLIFAGI-AARIPTEGKAILDSRGGMV----FALVCVAAFLII-VAVIFVEQGQR 240
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 306
++ +QY + S Y+P +N +G+ PV+ + LL P+++A + GS
Sbjct: 241 RIPVQYAKRVVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLIAQLTGSQ 295
Query: 307 -----PFWQHV--KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLN 357
+WQ + K ++NP +Y IY + F F +A P+E AD +
Sbjct: 296 TATDPSWWQEIIQKYLVNPSNP------IYIAIYFGLIVFFTYFYVAITFNPEERADEMK 349
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILAT-SSTILDHYLRRINEGFSIGF 416
K G IP +PGK T +YL + + G + L ++A + LD + G
Sbjct: 350 KFGGFIPGYRPGKPTADYLNFVLSRITLPGSIYLGLVAVLPNVFLDIGNSGGIQNLPFGG 409
Query: 417 TSVLIIV 423
T+VLI+V
Sbjct: 410 TAVLIMV 416
>gi|261380579|ref|ZP_05985152.1| preprotein translocase, SecY subunit [Neisseria subflava NJ9703]
gi|284796547|gb|EFC51894.1| preprotein translocase, SecY subunit [Neisseria subflava NJ9703]
Length = 437
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 206/420 (49%), Gaps = 19/420 (4%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
++++RL +V+ RIG IP+PG D + + Y +G L F G+ + S
Sbjct: 15 DLKKRLVFLLGALVVFRIGAHIPVPGVDAVALAKLYEGAANGIFGMLNMFSGGSLERFSI 74
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
F +GI P I +SI++Q+ IVPSL L+KEG G + I Y + ++ A+L++ VA
Sbjct: 75 FAIGIMPYISSSIIVQLASEIVPSLKALKKEGEAGRKIITKYTRYGTVLLAVLQSFGVAT 134
Query: 145 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 204
+ + S S++ + T LV G M + W+ + I+E G G G SLII GI++G
Sbjct: 135 FVYQQGVVVTS-SLEFHISTVVCLVTGTMFLMWLGEQITERGIGNGISLIITAGIVSGIP 193
Query: 205 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAAR 263
+ ++L+ S+ + ++G+ ++ +AVV E RKV + Y + S
Sbjct: 194 SGIVRLLTLTEQGSMSMLMAVSIVIGILLLI--YAVVYFESAQRKVPVHYAKRQFGSGIM 251
Query: 264 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVG 323
I ++PF +N +G+ P + + ++ FPS L GS V + G
Sbjct: 252 PGQSI-----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSNSTNSVLHKVAAMLQHG 306
Query: 324 ARPWV--YYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQA 381
++ + T FF + + + PKE+A+ L K GA +P ++PG+ T YL K+
Sbjct: 307 QPLYIGLFATTIIFFCYFYTALVFS--PKEMAENLKKSGAFVPGIRPGEQTSRYLEKVVL 364
Query: 382 STRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPS 441
+G L ++ T I + +N F +G TS+LI+V ++ R +Y VM S
Sbjct: 365 RLTLFGALYIT---TICLIPEFLTTALNVPFYLGGTSLLILVVVTMDFRTQINSY-VMSS 420
>gi|379058880|ref|ZP_09849406.1| protein translocase subunit secY/sec61 alpha [Serinicoccus profundi
MCCC 1A05965]
Length = 441
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 210/433 (48%), Gaps = 38/433 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-LSFVSGSVDEL 73
+L+ +F ++R+++ T ++ + R+G IP PG D L+ Q + +SG+V +
Sbjct: 1 MLSAFVRAFKTPDLRKKILFTLAIMALYRLGTHIPTPGVDYGLVQQCLNTAELSGNVLGM 60
Query: 74 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ GA ++LS F LGI P I A+I++Q+L ++P QL+KEG G K+ Y ++
Sbjct: 61 VNLFSGGAMVQLSVFALGIMPYITAAIIVQLLTVVIPRFEQLKKEGQAGQTKMTQYTRYL 120
Query: 131 SLGFAILEA-VIVACYSLPYSIYAAS-------HSVKHVMVTAFLLVCGAMTMSWICDTI 182
++G A+L+A +V P ++ + + + + ++ G + W+ + I
Sbjct: 121 TIGLAVLQASTLVTIAREPARLFGTTCTSVMPDDGIWTLSLMVLVMTAGTGLIMWMGELI 180
Query: 183 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 242
+E G G G SL+I + I G+ L + SSV + ++ LLG +V M VV
Sbjct: 181 TEKGVGNGMSLLIFISIAAGFPAA----LGAIYQSSVTTFVLVM-LLG---LVIMTLVVY 232
Query: 243 TEGC-RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
E C R++ +QY K R+ + YIP +N + + P++ + +L PS+LA
Sbjct: 233 VEQCQRRIPVQYA--KRMVGRRQYGGTST---YIPLKLNMANVIPIIFASSILMLPSLLA 287
Query: 302 SI-------LGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKE 351
+ +P W + L+ + WVY +YA + F F + P E
Sbjct: 288 NFNRPTEAGATAPGWVSFIDRYLSMGATGSGTHWVYMVLYAAMIIFFCFFYTSVTFNPTE 347
Query: 352 IADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEG 411
+AD + + G IP ++ G+ T EYL + G L L+ LA I + L N
Sbjct: 348 VADNMKRYGGFIPGIRAGRPTAEYLEYVINRITTPGALYLAGLALIPLIAFNALGVAN-- 405
Query: 412 FSIGFTSVLIIVG 424
F +G S+LIIVG
Sbjct: 406 FPLGGASILIIVG 418
>gi|325261514|ref|ZP_08128252.1| preprotein translocase, SecY subunit [Clostridium sp. D5]
gi|324032968|gb|EGB94245.1| preprotein translocase, SecY subunit [Clostridium sp. D5]
Length = 450
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 222/458 (48%), Gaps = 40/458 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F +IR+RLF T +++V+ R+G +P PG D I Q++ + +G
Sbjct: 1 MLGTVRRAFQIEDIRKRLFYTFLMLVVVRLGSQLPTPGVDPTYI-QEFFANQTGDAFNFF 59
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
D G+ ++S F L I+P I +SI+MQ+L +P L +++KEG DG +KI + +++
Sbjct: 60 DAFTGGSFTQMSVFALSITPYITSSIIMQLLTIAIPKLEEMQKEGEDGRKKIAAITRYVT 119
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC----GAMTMSWICDTISESGF 187
+ A++E++ +A V++ V A ++VC G+ + WI + I+E G
Sbjct: 120 VALALIESIAMAV-----GFGRQGLLVEYNFVNAAIVVCTLTAGSAFLMWIGERITEKGV 174
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLL-GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G S+++ + I++ + + Q + G S+ ++ +V + V++ +G
Sbjct: 175 GNGISIVLLINIISRVPDDFLTLFEQFVKGKSLAKGGLAAIVILAVLLVVVVFVIILQGG 234
Query: 247 -RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
RK+ +QY + + +IP +N +G+ P++ + L+ FP ++AS LG
Sbjct: 235 ERKIAVQY-----SQKVQGRKTYGGQSTHIPLKVNTAGVIPIIFASSLMQFPVVIASFLG 289
Query: 306 SPFWQHV-KEIL---------NPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEI 352
+ +IL NP + W VY + FF + + I P EI
Sbjct: 290 KGNGTGIGSQILKGLNSNNWCNPGNLI--YSWGLIVYIVLTIFFAYFYT--SITFNPLEI 345
Query: 353 ADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGF 412
A+ + K G IP ++PGK T+EYL KI F G L I+ + +
Sbjct: 346 ANNMKKSGGFIPGIRPGKPTVEYLQKILNYIIFIGACGLVIVQVIPYFFNGVFK---ANV 402
Query: 413 SIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRYG 450
S G TS++IIVG ++E + +A ++ + + L G
Sbjct: 403 SFGGTSLIIIVGVVLETIKQIEAQMLVRNYTGFLNNKG 440
>gi|325287068|ref|YP_004262858.1| preprotein translocase subunit SecY [Cellulophaga lytica DSM 7489]
gi|324322522|gb|ADY29987.1| preprotein translocase, SecY subunit [Cellulophaga lytica DSM 7489]
Length = 447
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 210/431 (48%), Gaps = 37/431 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-------- 77
E+R R+ +T L+++ R G I LPG D Q+ + SG+ E G FG
Sbjct: 15 EELRNRIIITLTLLLVYRFGAQIALPGIDS----QELGNLQSGT--EQGIFGLLNAFTGG 68
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
A K S F LGI P I ASI++Q++ +P L +L+KEG G + I W+++ I+
Sbjct: 69 AFAKASVFALGIMPYISASIVVQLMGIAIPYLQKLQKEGESGRKTINQITRWLTIAICIV 128
Query: 138 EA----VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
+A + + + +P S + + ++ +LV G + W+ + I++ G G G SL
Sbjct: 129 QAPAYLLGLGAFGVPDSAFVLGKGLDFMIPAVIILVTGTVFAMWLGEKITDKGIGNGISL 188
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
+I +GI+ + + ++ G + +L + ++ +V + +V++ R++ +Q
Sbjct: 189 LIMIGIIATMPQAFMQEVASRTGENTGGPMLILVEVILWFLVILASVLIVLATRQIPVQ- 247
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA-----SILGSPF 308
Y + AS E + IT YIP +N SG+ P++ L+ P ++ S +GS F
Sbjct: 248 YARRTASGGYEKN-ITGSRQYIPLKLNASGVMPIIFAQALMFLPGMIGKYFNTSAIGSWF 306
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA-NLP-KEIADYLNKMGARIPNV 366
+ ++ Y ++AF + +F F A +P ++AD L + G +P
Sbjct: 307 EVNFQDPFG---------LAYNLLFAFLIIIFTYFYTAITVPTNKMADDLKRSGGFVPGT 357
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGS 425
+PGK T ++L KI + G + L++LA I+ L + N G TS+LI+VG
Sbjct: 358 RPGKETADFLDKIMSLITLPGSIFLALLAVLPAIVVQLLGIQGNWAMFYGGTSLLIMVGV 417
Query: 426 IIELRRSYQAY 436
I+ + +Y
Sbjct: 418 AIDTVQQVNSY 428
>gi|410668868|ref|YP_006921239.1| preprotein translocase SecY [Thermacetogenium phaeum DSM 12270]
gi|409106615|gb|AFV12740.1| preprotein translocase SecY [Thermacetogenium phaeum DSM 12270]
Length = 424
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 209/423 (49%), Gaps = 27/423 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 85
E+RR++ T ++ +I RIG +P+PG + ++ + + + G D + GA +LS F
Sbjct: 12 EELRRKIGFTLLMFLIFRIGAHVPVPGINPEVLEKLFEGQLFGIFDVISG-GAFRRLSVF 70
Query: 86 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC- 144
+ I+P I ASI+MQ+L ++P L QL KEG G + I Y + ++ ++A+ +A
Sbjct: 71 AMSITPYINASIIMQLLTIVIPRLEQLSKEGEAGRKVIVQYTRYGTVLLGFIQAIGMAIA 130
Query: 145 -----YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
+P +I + + ++ A +L G + W+ + I+E G G G SLII GI
Sbjct: 131 LGRPMQGMPPAI--NNPGIGTYLMIAIILTAGTAFLMWLGEMITEKGIGNGISLIIFAGI 188
Query: 200 LTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
++ +L QL + +L +LG+ I + V V EG R++ +QY
Sbjct: 189 VSRLPSGAASILQQLSAGVIPITSVIILVVLGLLIIAGV--VAVNEGQRRIPVQY----- 241
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
A +IP +N +G+ P++ L+ FP +A + P+ + V+ L
Sbjct: 242 AKRVMGRKVYGGQSTHIPLRVNQAGVIPIIFAMSLMLFPVQIARWIDHPWARAVESALGF 301
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYL 376
T++ + +YA + F F A + P ++AD L K G +P ++PG+ T EY+
Sbjct: 302 GTALNS------VLYALLIIFFTYFYTAIIFNPMDVADNLKKYGGFVPGLRPGRPTGEYI 355
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
++ G + L+++A + + + F G T++LI+VG +E + +++Y
Sbjct: 356 NRVLTRLTLAGAVFLALIAILPNFMITFTKIPTLYF--GGTALLIVVGVALETMKQFESY 413
Query: 437 NVM 439
+M
Sbjct: 414 LLM 416
>gi|406935238|gb|EKD69262.1| hypothetical protein ACD_47C00189G0002, partial [uncultured
bacterium]
Length = 377
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 187/382 (48%), Gaps = 26/382 (6%)
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA- 139
+ S F LGI+P I ASI+MQ+L ++VP L +L KEG +G +KI Y + ++ ++A
Sbjct: 2 RFSIFALGIAPYINASIIMQLLVYVVPQLEKLAKEGTEGRQKISQYTRYGTIFIGAIQAF 61
Query: 140 -----VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
+ A + + H + ++T L G + W+ + I+E G G G SL+
Sbjct: 62 GMSFMLANAGGQGVLTPFMKDHFPRFAILTVLTLTAGTAFIMWLGEKITEKGIGNGISLL 121
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQY 253
I VGI+ + + G ++ ++P M +L FT+ AV+ + +G RK+ +QY
Sbjct: 122 IFVGIVASLPSAIVQTFRVFSGDAL-FYPKMFIIL-FFTVAVTAAVIWIQDGVRKIPVQY 179
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-----PF 308
A YIP IN +G+ P++ + +L FP ++ + G+ F
Sbjct: 180 -----AKRVVGRRVYGGQNTYIPLRINQAGVIPIIFASSILLFPGLITNFFGNYFSMDSF 234
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNV 366
+ + +N T +G WVY ++Y + F+ F I PK++AD + K G IP V
Sbjct: 235 MGKITQFIN--TVLGPSHWVYLSLYCLLIIFFSYFYTAITFNPKDLADNMKKYGGFIPGV 292
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+ G+ T EY+ + G + L+I+A IL + N F G T++LI+VG
Sbjct: 293 RSGRPTAEYIDRTLIRITLVGSIFLAIIAVIPNILISWA---NVPFYFGGTALLIVVGVG 349
Query: 427 IELRRSYQAYNVMPSLSKALRR 448
++ + +++ V + L++
Sbjct: 350 LDTIKQLESHLVTRNYDGFLKK 371
>gi|428301921|ref|YP_007140227.1| protein translocase subunit SecY [Calothrix sp. PCC 6303]
gi|428238465|gb|AFZ04255.1| protein translocase subunit secY/sec61 alpha [Calothrix sp. PCC
6303]
Length = 437
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 130/433 (30%), Positives = 214/433 (49%), Gaps = 28/433 (6%)
Query: 17 NNAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE 72
+A ++F + + +R RL VT ++++ R+G IP+P DR L D ++ S +
Sbjct: 8 QSAQDTFMQMAQAAGLRGRLLVTVGILMLIRMGIHIPIPNIDR-LAFADAVAKNSQILSF 66
Query: 73 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWW 129
L F G L F LGI P I ASI++Q+L +PSL L+K EG G K+ Y +
Sbjct: 67 LDIFSGGGLSALGIFALGILPYINASIIIQLLTAAIPSLENLQKNEGEAGRRKLSQYTRY 126
Query: 130 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+S G+AIL++V +A + L YA + V TA LV G+M + W + I+E G G
Sbjct: 127 VSFGWAILQSVFIAGFWL--KPYAYNFGPLFVAQTAIALVAGSMFVMWASEVITERGIGN 184
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
G+SL+I + I+ +TL +S + + ++ L+ +F + T+ V V EG R++
Sbjct: 185 GASLLIFLNIVASLPKTLGDTISFVETGNREAVGRVIVLVLLFLLTTVGIVFVQEGMRRI 244
Query: 250 KLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI-LGS 306
+ SA R+ + E ++P +N G+ P++ +L+ P ++
Sbjct: 245 PI-------ISARRQVGRRVLAEQRSFLPLRLNQGGVMPIIFAQAILSLPQFVSQFSKNQ 297
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIADYLNKMGARI 363
V L+P S W Y + + F+ F I N P +++ L KMGA I
Sbjct: 298 DVANFVANYLSPGRS---GSWFYSLVQLVAIVFFSYFYSSLIVN-PVDVSQNLKKMGASI 353
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PGK T EY+ ++ G + L ++A T ++ L I +G TS+LI+V
Sbjct: 354 PGIRPGKTTSEYIERVLNRLTLLGAVFLGLIAIIPTGIEQAL-GIPTFRGLGATSLLILV 412
Query: 424 GSIIELRRSYQAY 436
G I+ + Q Y
Sbjct: 413 GVAIDTSKQIQTY 425
>gi|340028932|ref|ZP_08664995.1| preprotein translocase subunit SecY [Paracoccus sp. TRP]
Length = 454
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 201/420 (47%), Gaps = 26/420 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGDFGAELK 81
+E+R+R++ T L++I R+G +IP+PG D R + Q G + + GA +
Sbjct: 21 TELRQRIWFTLGLLIIYRLGTYIPVPGIDGAALRNFMDQAQAGL--GGILSMFTGGALGR 78
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+ F LGI P I ASI++Q+L +VP+L QL+KEG G +KI Y + ++ A+ +A
Sbjct: 79 MGIFALGIMPYISASIIVQLLASMVPALEQLKKEGEQGRKKINQYTRYGTVALALFQAWG 138
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
+A SL + A + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 139 LAV-SLEHGNLAHEPGMFFRASVVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVA 197
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 261
L + L+Q ++ P +LG++ + V + V + RK+ +QY ++
Sbjct: 198 EIPAHLAQFLAQGRSGAIS-TPVILGVIVMVAAVIAFVVFMERALRKIHIQYPRRQVGMK 256
Query: 262 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---PFWQHVKEILNP 318
+ ++P +NP+G+ P + + LL P +++ G+ P + P
Sbjct: 257 IYDGQ-----SSHLPIKVNPAGVIPAIFASSLLLLPVTISTFSGNQTGPIMSTILAYFGP 311
Query: 319 ETSVGARPWVYYTIYAFFVFL--FNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
+P A VF F F+++ +++A+ L G IP ++PGK T +YL
Sbjct: 312 -----GQPLYLLFFAALIVFFTYFYTFNVSFKTEDVAENLKNQGGFIPGIRPGKRTEDYL 366
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
T + G L+ + ++ + L F G TSVLI+V +++ Q++
Sbjct: 367 TYVVTRVLVIGSAYLTFVCLLPEVIRNQL---AIPFYFGGTSVLIVVSVVMDTINQVQSH 423
>gi|192361952|ref|YP_001981228.1| preprotein translocase subunit SecY [Cellvibrio japonicus Ueda107]
gi|190688117|gb|ACE85795.1| preprotein translocase, SecY subunit [Cellvibrio japonicus Ueda107]
Length = 445
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 201/421 (47%), Gaps = 25/421 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 80
E+ RL + IVI RIG IP+PG D I + + G++ LG F GA
Sbjct: 16 GELWARLRFLFLAIVIYRIGTHIPVPGLDPERIA-NLFNQNQGTI--LGMFNMFSGGALE 72
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
++S LGI P I ASI+MQ+L + PSL QL+KEG G KI Y + ++ A ++A+
Sbjct: 73 RMSILALGIMPYISASIIMQLLTAVTPSLEQLKKEGDAGRRKINQYTRYFTVVLASVQAL 132
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+A S Y + + LV GA+ M W+ + ++E G G G S++I GI+
Sbjct: 133 AMAV-SFSGFAYGGEPGFAYYFIAVVSLVTGAIFMMWLGEQVTERGIGNGISMLIFAGIV 191
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLA 259
G + + + + ++ + +V +W VV E G R++ + Y A
Sbjct: 192 AGMPSAIGQAFESARQGDLNILALL--IVAILALVIIWLVVRIERGQRRITVNY-----A 244
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP- 318
+ ++P IN SG+ P + + +L FP+ +A G + +L
Sbjct: 245 KRQQGRQAYAAQSSHLPLKINMSGVIPAIFASSILLFPASIAQWFGQGGDGVINNVLQEI 304
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYL 376
++G +Y ++A + F F A + P+E+AD L K GA IP ++PG+ + +Y+
Sbjct: 305 ALAIGPGQPLYILLFAGLITFFCFFYTALMFNPREVADNLKKSGAYIPGIRPGEHSAKYI 364
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIELRRSYQA 435
+ G + +S + +L +L + N F +G TS+LI+V +++ QA
Sbjct: 365 DSVLTRLTVVGAIYMS----AVCLLPEFLIVVTNVPFYLGGTSLLIVVVVLMDFMSQVQA 420
Query: 436 Y 436
+
Sbjct: 421 H 421
>gi|152964677|ref|YP_001360461.1| preprotein translocase subunit SecY [Kineococcus radiotolerans
SRS30216]
gi|151359194|gb|ABS02197.1| preprotein translocase, SecY subunit [Kineococcus radiotolerans
SRS30216]
Length = 438
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 201/437 (45%), Gaps = 32/437 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
VL +F ++RR+L T +IV+ R+G F+P PG + Q + D LG
Sbjct: 6 VLTAIGRAFRTPDLRRKLLFTLGIIVLVRLGSFVPAPGVSYPAV-QQCIDLAQTGNDLLG 64
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+LS F LGI P I ASI++Q+L ++P L+KEG G K+ Y +
Sbjct: 65 LVNLFSGGALLQLSIFALGIMPYITASIIVQLLTVVIPRFEALKKEGQQGTTKLTQYTRY 124
Query: 130 ISLGFAILEAVI-VACYSLPYSIYAAS--------HSVKHVMVTAFLLVCGAMTMSWICD 180
+++G A+L++ V P ++ + S++ +++ + G + W+ +
Sbjct: 125 LTIGLAVLQSTTYVTIARDPSRLFGTACNAPVLPDQSIQTIVLMVLTMTAGTGLIMWMGE 184
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
++E G G G SL+I I G+ +L+ +G W F G+L V V V
Sbjct: 185 LVTERGIGNGMSLLIFAQIAAGFPTSLWA-----IGQENGWLTFA-GILLVGLFVVAAVV 238
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R+V +QY + + YIP +N +G+ PV+ + LL P+++
Sbjct: 239 AVEQSQRRVPVQYAKRMIGRRMYGGT-----STYIPLKVNMAGVIPVIFASSLLYLPALV 293
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNK 358
A P V I N G P +Y Y + F F +A P E+A+ + K
Sbjct: 294 AQ-FSDPNEAWVVWI-NDHLVRGDHP-IYMVGYFLLIIFFAYFYVAITFNPDEVAENMRK 350
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
G IP V+ G+ T EYL I G L L +++ ++ L N F G TS
Sbjct: 351 YGGFIPGVRAGRPTAEYLDYILTRITLPGSLYLGLISLLP-LIAFVLFNANTNFPFGGTS 409
Query: 419 VLIIVGSIIELRRSYQA 435
+LIIVG +E + ++
Sbjct: 410 ILIIVGVGLETVKQIES 426
>gi|297192683|ref|ZP_06910081.1| preprotein translocase subunit secY [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721662|gb|EDY65570.1| preprotein translocase subunit secY [Streptomyces pristinaespiralis
ATCC 25486]
Length = 439
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 209/440 (47%), Gaps = 32/440 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T +IV+ R+G IP+PG + + + G+ G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLAIIVLYRLGSHIPVPGVSYQNVQICVDAATKGNNSLFG 60
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 61 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRY 120
Query: 130 ISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICD 180
+++ A+L+ + + +++A+ S+ +V + G + W+ +
Sbjct: 121 LTVALAVLQGTGLVATARSGALFASCPVGNEIVPDRSIFTTIVMVVTMTAGTAAVMWLGE 180
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW-PFMLGLLGVFTIVTMWA 239
I++ G G G S+++ + I G+ L+ + G + W F +L F +V +
Sbjct: 181 LITDRGIGNGMSILMFISIAAGFPGALWAIKES--GKLAQGWIEFGTVILIGFVMVGL-V 237
Query: 240 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V V + R++ +QY + + + YIP +N +G+ PV+ + LL P++
Sbjct: 238 VFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPAL 292
Query: 300 LASILGSPF-WQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADY 355
+A S W K + G P+ Y+ + FF F + I+ P+E+AD
Sbjct: 293 VAQFSNSQSGW---KTWIEAHFVKGDHPYYIVTYFLLIVFFAFFY--VAISFNPEEVADN 347
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
+ K G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G
Sbjct: 348 MKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGGANQNFPFG 407
Query: 416 FTSVLIIVGSIIELRRSYQA 435
TS+LIIVG +E + ++
Sbjct: 408 GTSILIIVGVGLETVKQIES 427
>gi|16329923|ref|NP_440651.1| preprotein translocase subunit SecY [Synechocystis sp. PCC 6803]
gi|383321666|ref|YP_005382519.1| preprotein translocase subunit SecY [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324835|ref|YP_005385688.1| preprotein translocase subunit SecY [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490719|ref|YP_005408395.1| preprotein translocase subunit SecY [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435986|ref|YP_005650710.1| preprotein translocase subunit SecY [Synechocystis sp. PCC 6803]
gi|451814082|ref|YP_007450534.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803]
gi|2500730|sp|P77964.1|SECY_SYNY3 RecName: Full=Protein translocase subunit SecY
gi|1652409|dbj|BAA17331.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803]
gi|339273018|dbj|BAK49505.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803]
gi|359270985|dbj|BAL28504.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274155|dbj|BAL31673.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277325|dbj|BAL34842.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407957815|dbj|BAM51055.1| preprotein translocase subunit SecY [Bacillus subtilis BEST7613]
gi|451780051|gb|AGF51020.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803]
Length = 442
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 216/440 (49%), Gaps = 41/440 (9%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 65
+A E+F + + +R RL +T L+++ R+G FIP+P DR+ Q +L+
Sbjct: 10 SAQETFLQMAQAAGLRGRLLITIGLLILVRVGIFIPVPDIDRQAFSQAINDNSVIGFLNI 69
Query: 66 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 124
+G G + F LGI P I ASI+MQ+L +P+L L+K EG G KI
Sbjct: 70 FTG--------GGLSTVGIFALGILPYINASIIMQLLTAAIPALEDLQKNEGEAGRRKIS 121
Query: 125 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
Y +I+ G+ I++ + + L YA ++ + T + G+M + WI + I+E
Sbjct: 122 QYSRYIAFGWCIIQGLGLTVGLL--RPYANNYGPLFIFQTVLAITAGSMFVMWISELITE 179
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G G+SL+I V I+ +TL + + + ++ L+ VF ++ + V V E
Sbjct: 180 RGIGNGASLLIFVNIVATLPQTLGQTIEYAQSGGRQSITAVVLLMLVFLVMIVGIVFVQE 239
Query: 245 GCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
G R++ + SA R+ E Y+P +N G+ P++ + +L PS LA
Sbjct: 240 GTRRIPI-------ISARRQVGKKLYRERTSYLPLRLNQGGVMPIIFASAVLILPSSLAG 292
Query: 303 I-LGSPFWQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIFD---IANLPKEIADYL 356
G+ EI + S RP WVY +Y+ +F F+ F I N P++++ L
Sbjct: 293 FATGNEGLGGFGEIF-VQISNALRPGTWVYTVVYSVMIFFFSYFYASLIVN-PEDVSKNL 350
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
KMG+ IP ++PGK T +YL + F G + LS +AT ++ + +G
Sbjct: 351 KKMGSSIPGIRPGKKTEQYLEGVLNRLTFLGAIFLSFVATLPIFVEQ-ATGVTTFQGLGA 409
Query: 417 TSVLIIVGSIIELRRSYQAY 436
TS+LI+VG I+ + Q Y
Sbjct: 410 TSLLILVGVAIDTAKQIQTY 429
>gi|345877725|ref|ZP_08829464.1| 30S ribosomal protein S11 [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344225255|gb|EGV51619.1| 30S ribosomal protein S11 [endosymbiont of Riftia pachyptila (vent
Ph05)]
Length = 447
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 205/437 (46%), Gaps = 29/437 (6%)
Query: 13 SSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE 72
S++LN+ +E+R+RL A +++ RIG FIP+PG + + + +D
Sbjct: 6 SAMLNSLGGMGRLTELRQRLLFVAGALLVFRIGTFIPVPGVNPVALAALFEQAQGSILDM 65
Query: 73 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
F GA + S F LGI P I ASI+MQ++ ++P L QL+KEG G KI Y +
Sbjct: 66 FNMFSGGALERASLFALGIMPYISASIIMQLMTSVLPKLEQLKKEGEAGRRKITQYTRYG 125
Query: 131 SLGFAILEAVIVACYSLPYSI----YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
++ A +AV ++ SI A V V+ A LV G M + W+ + I+E G
Sbjct: 126 TVVLASFQAVGISIALQSQSIGGQSVVAQQGVGFVVTAAVSLVTGTMFLMWLGEQITERG 185
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G S+II GI+ G + L + ++ L + VT + V V G
Sbjct: 186 IGNGISMIIFAGIVAGLPSAIGGTLELARTGELNVLTILV-LFALAIAVTGFVVFVERGQ 244
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R++ + Y A + + ++P +N +G+ P + + ++ FP+ L G+
Sbjct: 245 RRITVNY-----AKRQQGRRLMQAQSSHLPLKLNMAGVIPPIFASSIILFPATLGQWFGN 299
Query: 307 P----FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMG 360
+ Q + L+P P VY YA + F F A + KE AD L + G
Sbjct: 300 SEETRWLQDIFSKLSP-----GEP-VYVMAYAAAIIFFCFFYTALVFNSKETADNLKRSG 353
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSV 419
A IP ++PG+ T +Y+ + + F G +I T+ +L +L N F G TS+
Sbjct: 354 AFIPGIRPGEQTAKYIDGVMSRLTFAG----AIYITAVCLLPEFLIVGWNVPFYFGGTSL 409
Query: 420 LIIVGSIIELRRSYQAY 436
LIIV +++ QA+
Sbjct: 410 LIIVVVVMDFMAQIQAH 426
>gi|157414144|ref|YP_001485010.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9215]
gi|254525969|ref|ZP_05138021.1| preprotein translocase, SecY subunit [Prochlorococcus marinus str.
MIT 9202]
gi|157388719|gb|ABV51424.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9215]
gi|221537393|gb|EEE39846.1| preprotein translocase, SecY subunit [Prochlorococcus marinus str.
MIT 9202]
Length = 439
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 217/453 (47%), Gaps = 49/453 (10%)
Query: 6 FLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF 65
F+N R S ++ F E+R R+ T L+++ R+G +IP+PG DR + SF
Sbjct: 2 FVNKSRNPSASEILSQLFLNKELRSRVLTTLGLLLLVRLGIYIPMPGIDRV----AFKSF 57
Query: 66 VSGSVDELG-----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDG 119
+ +G G L F LGI P I ASI++Q+L +P L L+K EG G
Sbjct: 58 IDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIIIQLLTASLPVLEDLQKNEGEAG 117
Query: 120 HEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWIC 179
KI ++SLG+ L+++I + Y+I S + V+ T+ LV G+M + W
Sbjct: 118 RRKIAQITRYVSLGWGFLQSIIFSLILRQYAIQGISETT-FVLQTSIALVTGSMLVMWFS 176
Query: 180 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQ--------LLGSSVRWWPFMLGLLGV 231
+ I+E G GQG+SL+I + I++ + L + + +LG +V LLGV
Sbjct: 177 EIITEKGIGQGASLVIFLNIVSTLPKALSSTIEKAQTGDRGDVLGIAV--------LLGV 228
Query: 232 FTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE---DSPITEVEPYIPFNINPSGMQPVL 288
F + + + V EG R++ + SA R+ + + + Y+P +N G+ P++
Sbjct: 229 FLLTIVGIIFVQEGARRI-------PIVSAKRQIGNSTLLPTRQSYLPLKLNAGGVMPII 281
Query: 289 TTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIA 346
+ L+ P +A++ G+P + LNP +S PW Y + + F+ F +
Sbjct: 282 FASALIFLPITIANVTGNPILIKLASSLNPGSS---NPWPYALTFFSLILGFSYFYASLT 338
Query: 347 NLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR 406
P ++A L K G IP V+PG T YL+ IQ LL + S I+ +
Sbjct: 339 INPVDVASNLKKGGVAIPGVRPGTNTANYLSGIQNRLT----LLGGLFLGSVAIIPAAVE 394
Query: 407 R---INEGFSIGFTSVLIIVGSIIELRRSYQAY 436
R + +G TS+LI+VG I+ + Q Y
Sbjct: 395 RATNVQTFQGLGATSLLILVGVAIDTAKQIQTY 427
>gi|126697069|ref|YP_001091955.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9301]
gi|126544112|gb|ABO18354.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9301]
Length = 439
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 217/453 (47%), Gaps = 49/453 (10%)
Query: 6 FLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF 65
F+N R S ++ F E+R R+ T L+++ R+G +IP+PG DR + SF
Sbjct: 2 FVNKSRNPSASEILSQLFLNKELRSRVLTTLGLLLLVRLGIYIPMPGIDRV----AFKSF 57
Query: 66 VSGSVDELG-----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDG 119
+ +G G L F LGI P I ASI++Q+L +P L L+K EG G
Sbjct: 58 IDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIIIQLLTASLPVLEDLQKNEGEAG 117
Query: 120 HEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWIC 179
KI ++SLG+ L+++I + Y+I S + V+ T+ LV G+M + W
Sbjct: 118 RRKIAQITRYVSLGWGFLQSIIFSLILKQYAIQGISETT-FVLQTSIALVTGSMLVMWFS 176
Query: 180 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQ--------LLGSSVRWWPFMLGLLGV 231
+ I+E G GQG+SL+I + I++ + L + + +LG +V LLGV
Sbjct: 177 EIITEKGIGQGASLVIFLNIVSTLPKALSSTIEKAQTGDRGDVLGIAV--------LLGV 228
Query: 232 FTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVL 288
F + + + V EG R++ + SA R+ T + + Y+P +N G+ P++
Sbjct: 229 FLLTIVGIIFVQEGARRI-------PIVSAKRQIGTSTLLPTRQSYLPLKLNAGGVMPII 281
Query: 289 TTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIA 346
+ L+ P +A++ G+P + LNP +S PW Y + + F+ F +
Sbjct: 282 FASALIFLPITIANVTGNPVLIKLASSLNPGSS---NPWPYALTFFSLILGFSYFYASLT 338
Query: 347 NLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR 406
P ++A L K G IP V+PG T YL+ IQ LL + S I+ +
Sbjct: 339 INPVDVASNLKKGGVAIPGVRPGTNTANYLSGIQNRLT----LLGGLFLGSVAIIPAAVE 394
Query: 407 R---INEGFSIGFTSVLIIVGSIIELRRSYQAY 436
R + +G TS+LI+VG I+ + Q Y
Sbjct: 395 RATNVQTFQGLGATSLLILVGVAIDTAKQIQTY 427
>gi|150020865|ref|YP_001306219.1| preprotein translocase subunit SecY [Thermosipho melanesiensis
BI429]
gi|149793386|gb|ABR30834.1| preprotein translocase, SecY subunit [Thermosipho melanesiensis
BI429]
Length = 428
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 211/436 (48%), Gaps = 59/436 (13%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 80
E+R R+ T +++++ R+G +IP+PG + + + +G+ L F GA
Sbjct: 13 ELRDRIVFTLLMLIVFRLGIYIPVPGVNLKAWGTAFSQMGTGAAGGLLSFYDVFTGGAFR 72
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+ S F + ++P I ASI++Q+L ++PSL +L KEG +G +K + +++ L+
Sbjct: 73 RFSIFAMSVTPYINASIILQLLSSVIPSLKELLKEGEEGRKKFQRITRNLTVILGALQGF 132
Query: 141 IVACYSLPYSIYAASHSVKHVMV---------TAFLLVCGAMTMSWICDTISESGFGQGS 191
+V+ + + S ++V+V + L+ G M + WI D I+E G G G
Sbjct: 133 VVS--------FGLARSFENVLVIPLWTFTLLSTITLLAGTMFLLWIGDRITEKGIGNGI 184
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
S++I GI+ Y Y + L G ++ W F LLGV ++ + + V + R++ +
Sbjct: 185 SVLIFAGIVARYPA--YFRTAVLGGLNIFEWIF---LLGVMFLMVIGIIYVQQAERRIVV 239
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
QY AS +IP +N SG+ P++ +++ P +A S +
Sbjct: 240 QY-----ASRMVGRRIYGGTSTHIPIKVNHSGVIPIIFGWAIVSIPVGIAQFTNSQTLKS 294
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFN------IFDIANLPKEIADYLNKMGARIPN 365
+ + +P + TIYA +F F +FD PK+IA + G IP
Sbjct: 295 LFSMTSP---------LIITIYAVLIFFFTYFYSVVVFD----PKDIAQNIKSYGGYIPG 341
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIV 423
++PGK T +Y+T++ F G L L I+A L YL + G SI G TS LI V
Sbjct: 342 IRPGKPTEQYITRVLNRITFVGALFLVIIA-----LVPYLVQGVTGVSIWLGGTSALIAV 396
Query: 424 GSIIELRRSYQAYNVM 439
G +++ + +A+ +M
Sbjct: 397 GVALDIAQQMEAHLIM 412
>gi|169830456|ref|YP_001716438.1| preprotein translocase subunit SecY [Candidatus Desulforudis
audaxviator MP104C]
gi|169637300|gb|ACA58806.1| preprotein translocase, SecY subunit [Candidatus Desulforudis
audaxviator MP104C]
Length = 424
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 216/441 (48%), Gaps = 46/441 (10%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 85
+E+R +L T +++I RIG +P PG + + S V ++ GA S F
Sbjct: 14 TELRNKLLFTLAMLLIFRIGAHVPTPGVRPEAMAELIASGVLFGFFDVISGGAFKNFSVF 73
Query: 86 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACY 145
+GI P I ASI+MQ+L ++P L +L KEG +G +KI+ YI + + A L+A+
Sbjct: 74 AMGIIPYINASIIMQLLTVVIPKLERLAKEGEEGRKKIQQYIRYGTAVLAFLQAI----- 128
Query: 146 SLPYSIYAA--SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
+ +I A S +V + + A +L G + + W+ + I+E G G G SL+I GI++
Sbjct: 129 GMSVAIKGALISPTVVNYLFVALILTAGTVFLMWLGEQITEKGIGNGISLLIFAGIVSRV 188
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 263
E + +++ L ++ +L LL + T+V V + EG R++ +QY K R
Sbjct: 189 PEGVTRVVEYLQVGTINILS-VLALLIIGTLVIAAVVAMHEGQRRIPVQYA--KRVIGRR 245
Query: 264 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVG 323
T ++P +N +G+ PV+ + +L FP +++L +
Sbjct: 246 VYGGQTT---HLPLKVNQAGVIPVIFASSMLIFP---------------EQMLQWFSGNA 287
Query: 324 ARPW----------VYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
W + T+YA + F F A + P ++AD + K G IP ++PG+
Sbjct: 288 VAAWFLNFFHWGSFFHTTLYALLIIGFTYFYTAIIMNPVDMADNIKKHGGFIPGIRPGRP 347
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINE--GFSIGFTSVLIIVGSIIEL 429
T EY++K+ + G + L+++A IL +++ + G T++LI+VG +E
Sbjct: 348 TAEYISKVMSRITLAGAIFLALIA----ILPNFVLLATQIPNVYFGGTALLIVVGVALET 403
Query: 430 RRSYQAYNVMPSLSKALRRYG 450
+ +A+ +M S +++ G
Sbjct: 404 MKQVEAHLLMRSYQGFIKQSG 424
>gi|374314377|ref|YP_005060806.1| membrane-embebed preprotein translocase subunit [Serratia
symbiotica str. 'Cinara cedri']
gi|363988603|gb|AEW44794.1| membrane-embebed preprotein translocase subunit [Serratia
symbiotica str. 'Cinara cedri']
Length = 443
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 212/437 (48%), Gaps = 32/437 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++RR+ + +++ R+G FIP+PG D ++ + L G++ E+ + GA +
Sbjct: 17 SELKRRILFVTIALIVFRVGSFIPIPGVDTTVLAK-LLEQQRGTIIEMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L+Q++KEG G +KI Y + +L AI +A+ +
Sbjct: 76 SVFALGIMPYISASIIIQLLTVVHPTLMQIKKEGEAGRQKISQYTRYGTLVLAIFQAIGI 135
Query: 143 ACYSLP----YSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A LP + K LV G + + W+ + ISE G G G S+II G
Sbjct: 136 AT-GLPNMPGMQDLVINLGFKFYFTAVISLVTGTIFLMWLGEQISEHGIGNGISMIIFAG 194
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ G + + Q + + +L + VF VT V + G R++ + Y
Sbjct: 195 IVAGLPPAVAHTIEQARQGELHFLLLLLVTVLVFA-VTFLVVFIERGQRRIVVNY----- 248
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEI-- 315
A + ++P +N +G+ P + + ++ FP+ +AS GS W + +
Sbjct: 249 AKRQQGRRIYAAQSTHLPLKVNMAGVIPAIFASSVILFPATIASWFGGSTHWNWLAMLSI 308
Query: 316 -LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKAT 372
L P +P +Y +YA + F F A + P+E AD L K GA +P ++PG+ T
Sbjct: 309 YLQP-----GQP-LYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQT 362
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRR-INEGFSIGFTSVLIIVGSIIELRR 431
+Y+ K+ G + ++ + ++ ++R + F G TS+LI+V I++
Sbjct: 363 AKYIDKVMTRLTCVGAIYITFIC----LIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFIT 418
Query: 432 SYQAYNVMPSLSKALRR 448
Q + AL++
Sbjct: 419 QIQTLMMSSQYESALKK 435
>gi|425439158|ref|ZP_18819490.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9717]
gi|389714939|emb|CCI00548.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9717]
Length = 439
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 198/402 (49%), Gaps = 25/402 (6%)
Query: 45 GYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCH 104
G F+P+PG DR + + + + +L G L F LGI P I ASI++Q+L
Sbjct: 41 GMFVPIPGLDRARLAEIIQGNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLLTA 100
Query: 105 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 163
+PSL L+K EG G KI +I+ G+AI++++ + L + + ++ +
Sbjct: 101 ALPSLEDLQKNEGEAGRRKIAQITRYIAFGWAIIQSIGI-TLGLLVANGVVAGTLPSIAA 159
Query: 164 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP 223
T LV G+M + WI + I+E G G G+SL+I V I+ +TL ++ +
Sbjct: 160 TVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQAIA 219
Query: 224 FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSP--ITEVEPYIPFNINP 281
++ LL VF ++ + V V EG R++ + SA R+ E Y+P +N
Sbjct: 220 QVVILLLVFLVMIIGIVFVQEGTRRI-------PIVSARRQVGRRLYRERTSYLPLRLNQ 272
Query: 282 SGMQPVLTTTYLLAFPSILASIL--GSPFWQHVKEILNPETSVGARP--WVYYTIYAFFV 337
G+ P++ + +L P L L +P Q + +++N RP W Y Y+ +
Sbjct: 273 GGVMPIIFASAVLVLPFQLVQALPTDNPVGQVLVQLVN-----ALRPDSWGYVAFYSLLI 327
Query: 338 FLFNIF---DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSIL 394
F+ F I N PK+++ L KMGA IP ++PG AT YL + G L LS++
Sbjct: 328 LGFSFFYASLIVN-PKDMSQNLKKMGASIPGIRPGTATTNYLEGVLNRLTLLGALFLSLV 386
Query: 395 ATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
AT T+++ + +G TS+LI+VG I+ + Q Y
Sbjct: 387 ATVPTVVESA-TGVTTFRGLGATSLLILVGVAIDTAKQIQTY 427
>gi|315633475|ref|ZP_07888765.1| preprotein translocase subunit SecY [Aggregatibacter segnis ATCC
33393]
gi|315477517|gb|EFU68259.1| preprotein translocase subunit SecY [Aggregatibacter segnis ATCC
33393]
Length = 441
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 210/435 (48%), Gaps = 28/435 (6%)
Query: 25 KSEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELK 81
KSE+R RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KSELRSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSR 74
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV
Sbjct: 75 ASIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVG 134
Query: 142 VACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
++ LP + + LV G M + W+ + I+E G G G SLII GI
Sbjct: 135 IST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGI 193
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 259
+ G + + + Q + + +L + + +VT + V V G R++K++Y A
Sbjct: 194 VAGLPAAVGQTIEQARLGQMHFLVLIL-IAVIVFVVTYFVVFVERGQRRIKIEY-----A 247
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 315
+ + ++P +N +G+ P + + ++ FP+ L +G + + +
Sbjct: 248 KRQQGRQILGGHTTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSML 307
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
L+P +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 308 LHP-----GQP-LYLIVYATAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTS 361
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
Y+ KI GGL ++ + I+ N F G TS+LI+V I++
Sbjct: 362 RYIDKIMTRLTLIGGLYVTFVCLVPYIMTSAW---NVQFYFGGTSLLIVVVVIMDFIVQI 418
Query: 434 QAYNVMPSLSKALRR 448
Q++ + AL++
Sbjct: 419 QSHLMSTKYESALKK 433
>gi|194335465|ref|YP_002017259.1| preprotein translocase subunit SecY [Pelodictyon
phaeoclathratiforme BU-1]
gi|194307942|gb|ACF42642.1| preprotein translocase, SecY subunit [Pelodictyon
phaeoclathratiforme BU-1]
Length = 443
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 215/445 (48%), Gaps = 43/445 (9%)
Query: 16 LNNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
LN + + K E+R+R+ T +L+ + R+G I +PG D + + S D G
Sbjct: 3 LNESIRNINKIPELRQRILYTLLLLFVYRLGSHITIPGVDAAAVSGASQTH---SNDLFG 59
Query: 75 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
F GA + S F LGI P I ASI++Q+L + P +L+KEG DG +KI +
Sbjct: 60 LFDLFVGGAFARASIFSLGIMPYISASIIVQLLGAVTPYFQKLQKEGEDGRQKISQMTRY 119
Query: 130 ISLGFAILEA--VIVACYSLPYSIYAA---SHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
++ A+L+A V V+ S P S A + + LL + + W+ + I+E
Sbjct: 120 GTVLIAVLQAWGVSVSLAS-PASFGTAIVPDPGIFFTITVVVLLTASTVFVMWLGEKITE 178
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQL-LGSSVRWWPFMLGLLGVFTIVTMWAVVVT 243
G G G SLII +GIL + + L + LGS + W + +L + + + V++T
Sbjct: 179 RGIGNGISLIIMIGILARFPQALVAEFRSVSLGS--KNWVIEIIILAMMAAIVAFVVILT 236
Query: 244 EGCRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
G R+V +Q+ G K+ + + YIP IN +G+ P++ ++ P
Sbjct: 237 VGTRRVPVQHAKRVVGRKVYGGSTQ---------YIPMRINTAGVMPIIFAQSIMFLPGT 287
Query: 300 LASIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYL 356
S + Q + ++L ++ W Y ++ + F F IA PKE+AD +
Sbjct: 288 FLSFFPENEVMQSIAKLLAYDS------WWYALMFGTMIVFFTYFYTAIAFNPKEVADTM 341
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--I 414
+ G IP V+PGK+T +++ I G + L+I+A T L + + GF+
Sbjct: 342 RRQGGFIPGVRPGKSTADFIDNILTRITLPGAISLAIIAILPTFLTKF-ANVTPGFAQFF 400
Query: 415 GFTSVLIIVGSIIELRRSYQAYNVM 439
G TS+LIIVG ++ + +++ +M
Sbjct: 401 GGTSLLIIVGVGLDTLQQVESHLLM 425
>gi|408501549|ref|YP_006865468.1| transporter, probably The general secretory pathway (Sec)
[Bifidobacterium asteroides PRL2011]
gi|408466373|gb|AFU71902.1| transporter, probably The general secretory pathway (Sec)
[Bifidobacterium asteroides PRL2011]
Length = 442
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 206/430 (47%), Gaps = 27/430 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----D 75
++F E+R+++F +I+I RIG FIP PG D + + + +G+ D +G
Sbjct: 6 QAFRTKELRKKIFFVLGIIIIYRIGSFIPTPGVDYPAVQKCITT--AGNEDFIGLVNLFS 63
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y ++++G A
Sbjct: 64 GGALLQLSIFALGIMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTEYTRYLTIGLA 123
Query: 136 ILEAVIVACYSLPYSIYAASHSVK--------HVMVTAFLLVCGAMTMSWICDTISESGF 187
+L++ + + +++ + + ++ V ++ G + W+ + I++ G
Sbjct: 124 VLQSTTILVTANKGALFGGACQQQVIPDSSWWNMGVMVLIMTGGTGLIMWMAELITDKGI 183
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G G S++I + I +G+ L+ + G W F + ++ V ++ + V R
Sbjct: 184 GNGMSVLIFISICSGFLPQLWNIGWGTNGKDGDWVKFGI-VVTVLLVILILVDYVELAQR 242
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
++ +QY + S Y+P IN SG+ P + + +LA P+++A S
Sbjct: 243 RIPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQFGNSD 297
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPN 365
Q+ + ++ + W Y +Y+ + F F I P E AD + + G IP
Sbjct: 298 --QNWVKWIDANMANTTSVW-YIVLYSVMIVFFCFFYTSITFNPDETADNMKEYGGFIPG 354
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++ G+AT YL+ + G + L +A T+L L +IN G T++LII G
Sbjct: 355 IRAGRATSRYLSYVMNRLNTVGAIYLLFVALIPTVLIMLL-KINSKLPFGGTTILIIAGV 413
Query: 426 IIELRRSYQA 435
++ R +A
Sbjct: 414 GLDTLRQARA 423
>gi|154249797|ref|YP_001410622.1| preprotein translocase subunit SecY [Fervidobacterium nodosum
Rt17-B1]
gi|154153733|gb|ABS60965.1| preprotein translocase, SecY subunit [Fervidobacterium nodosum
Rt17-B1]
Length = 428
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 219/425 (51%), Gaps = 37/425 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRR-----LIPQDYLSFVSGSVDELGDF---GA 78
E+R R+ T +++++ R+G ++P+PG + + L Q + ++G V D GA
Sbjct: 13 EVRDRVIFTFLMLLVFRLGIYVPVPGINIKAWGEALSKQG--TGLAGGVLSFYDVFTGGA 70
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
+ S F + ++P I ASI+MQ+L I+PSL +L KEG +G +K + Y ++LG A L+
Sbjct: 71 FSRFSVFSMSVTPYINASIIMQLLASIIPSLKELLKEGEEGRKKFQHYTKNLTLGLAALQ 130
Query: 139 AVIVA-CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ +V+ + Y A ++ V+ LV G M + WI D I+E G G G S++I
Sbjct: 131 SFVVSFGLARSYQGIIAINTWLFSFVSTVSLVAGTMFLLWIGDRITEKGIGNGVSIMIFA 190
Query: 198 GILTGYTETLYKMLSQLLGS-SVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
GI++ Y S +LG+ ++ W F++ + +F +V + + V + R++K++Y
Sbjct: 191 GIVSRYPAYFR---SAVLGNLNIFGWIFLIA-VAIFMVVAI--IYVQQAERRIKIEY--- 241
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
A+ Y+P +N SG+ P++ +++ P +A I G+ + + +
Sbjct: 242 --ATRMVGRRIYGGTSTYLPIKVNHSGVIPIIFAWAIISIPEAIAQITGAQWAIKLFSMQ 299
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIE 374
+P + IYA +F F F + PK+I++ + + G IP ++ GK T E
Sbjct: 300 SPLMMI---------IYALLIFFFTYFYSVVVIDPKDISENIKRYGGFIPGIRAGKPTEE 350
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+T + F G + L ++ +++ + R+N +G TS LI VG +++ + +
Sbjct: 351 YITFVLNRVTFLGAIFLVGISLLPYLVEG-ITRVN--IWLGGTSALIAVGVALDIAQQIE 407
Query: 435 AYNVM 439
A+ +M
Sbjct: 408 AHLIM 412
>gi|123966955|ref|YP_001012036.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9515]
gi|123201321|gb|ABM72929.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9515]
Length = 439
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 206/428 (48%), Gaps = 33/428 (7%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFG 77
F E+R R+ T L+++ R+G +IP+PG DR + SF+ +G G
Sbjct: 19 FLNKELRNRVLTTLGLLLLVRLGIYIPMPGIDRV----AFKSFIDQGGQLIGFLDIFTGG 74
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAI 136
L F LGI P I ASI++Q+L +P L L+K EG G KI ++SLG+
Sbjct: 75 GISTLGIFALGILPFINASIIIQLLTASLPVLEDLQKNEGEAGRRKIAQITRYVSLGWGF 134
Query: 137 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
L+++I + Y++ S S V+ T+ LV G+M + W + I+E G GQG+SL+I
Sbjct: 135 LQSIIFSLILRQYAVEGISESA-FVLQTSIALVTGSMIVMWFSEIITEKGIGQGASLVIF 193
Query: 197 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
+ I+ + L + + ++ LLGVF + + + V EG R++
Sbjct: 194 LNIVATLPKALSSTIEKAQTGDRGDVLGIVVLLGVFLLTIVGIIFVQEGARRI------- 246
Query: 257 KLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
+ SA R+ S + + Y+P +N G+ P++ + L+ P +A++ G+P +
Sbjct: 247 PIVSAKRQIGSSSLLPTRQSYLPLKLNAGGVMPIIFASALIFLPITVANVTGNPVLIKLA 306
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKA 371
LNP +S PW Y + + F+ F + P ++A L K G IP V+PG
Sbjct: 307 GSLNPGSS---NPWPYALTFFALILGFSYFYASLTINPVDVASNLKKGGVAIPGVRPGSK 363
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRR---INEGFSIGFTSVLIIVGSIIE 428
T YL+ IQ LL + S I+ + R + +G TS+LI+VG I+
Sbjct: 364 TANYLSGIQNRLT----LLGGLFLGSVAIIPAAVERATNVQTFQGLGATSLLILVGVAID 419
Query: 429 LRRSYQAY 436
+ Q Y
Sbjct: 420 TAKQIQTY 427
>gi|312866537|ref|ZP_07726754.1| preprotein translocase, SecY subunit [Streptococcus downei F0415]
gi|311097968|gb|EFQ56195.1| preprotein translocase, SecY subunit [Streptococcus downei F0415]
Length = 434
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 213/436 (48%), Gaps = 42/436 (9%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 73
E+ +R+++F T I++ RIG I +PG + + + L+ +SGS +
Sbjct: 8 EALRLKNVRKKIFFTIFAILVFRIGAHITVPGVNATALENMKDLPFLNMLNLISGSA--M 65
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G F S F LG+SP I ASI++Q+L I P V+ K+G G K+ +ISL
Sbjct: 66 GSF------SIFALGVSPYITASIVVQLLQMDIYPRFVEWSKQGEVGRRKLNQATRYISL 119
Query: 133 GFAILEAV-IVACYS-LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ I A ++ L S AS S K + +L G + ++W+ D I++ GFG G
Sbjct: 120 VLAFIQSISITAGFNILASSKLLASPSPKTFITVGLILTTGTVIVTWLGDQITDKGFGNG 179
Query: 191 SSLIICVGILTGYTETLYKMLSQLL-----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
S+II GI+ + + ++ G W ++ L+ ++ + V +
Sbjct: 180 VSMIIFAGIIAQIPNAVKSIYNEYFVNIAPGQLTNSWIYIGLLVFAVLVIIFFTTFVQQA 239
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
++ +QY KLA A S Y+P +NP+G+ PV+ + + A PS + + L
Sbjct: 240 EYQIPIQYT--KLAQGAPTSS-------YLPLKVNPAGVIPVIFASSITAAPSSIITFLQ 290
Query: 306 S-----PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
S P+ ++E+ + ++ G +Y + A F F + + P++ A+ L K
Sbjct: 291 STNVNLPWLDTLQELFSYQSPTGMA--IYAVLIALFSFFYTFVQVN--PEKTAENLQKNA 346
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
A IP+V+PG+ T EYL+ + G + L+ +A I+ L ++ ++G TS+L
Sbjct: 347 AYIPSVRPGRETEEYLSSLLKKLATIGSIFLAFVALIP-IIAQQLFNLSSTVALGGTSLL 405
Query: 421 IIVGSIIELRRSYQAY 436
I++ + IE + + Y
Sbjct: 406 ILISTGIEGMKQLEGY 421
>gi|241759615|ref|ZP_04757716.1| preprotein translocase, SecY subunit [Neisseria flavescens SK114]
gi|241319987|gb|EER56368.1| preprotein translocase, SecY subunit [Neisseria flavescens SK114]
Length = 437
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 208/427 (48%), Gaps = 18/427 (4%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
++++RL +V+ RIG IP+PG D + + Y +G L F G+ + S
Sbjct: 15 DLKKRLAFLLGALVVFRIGAHIPVPGVDAVALAKLYEGAANGIFGMLNMFSGGSLERFSI 74
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
F +GI P I ASI++Q+ IVPSL L+KEG G + I Y + ++ A+L++ VA
Sbjct: 75 FAIGIMPYISASIIVQLASEIVPSLKALKKEGEAGRKIITKYTRYGTVLLAVLQSFGVAT 134
Query: 145 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 204
+ + S S++ + T LV G M + W+ + I+E G G G SLII GI++G
Sbjct: 135 FVYQQGVVVTS-SLEFHISTVVCLVTGTMFLMWLGEQITERGIGNGISLIITAGIVSGIP 193
Query: 205 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAAR 263
+ ++L+ S+ + ++G+ ++ +AVV E RKV + Y + S
Sbjct: 194 SGIVRLLTLTEQGSMSMLMAVSIVIGILLLI--YAVVYFESAQRKVPVHYAKRQFGSGMM 251
Query: 264 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVG 323
I ++PF +N +G+ P + + ++ FPS L GS V + G
Sbjct: 252 PGQSI-----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSNSTNSVLHKVAAMLQHG 306
Query: 324 ARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQA 381
+P +Y ++A + F F A + PKE+A+ L K GA +P ++PG+ T YL K+
Sbjct: 307 -QP-LYIVLFATTIIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQTSRYLEKVVL 364
Query: 382 STRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPS 441
+G L ++ + L L+ F +G TS+LI+V ++ R +Y +
Sbjct: 365 RLTLFGALYITTICLIPEFLTTALK---VPFYLGGTSLLILVVVTMDFRTQINSYRMSSQ 421
Query: 442 LSKALRR 448
+ R
Sbjct: 422 YEDLMSR 428
>gi|399525055|ref|ZP_10765534.1| preprotein translocase, SecY subunit [Atopobium sp. ICM58]
gi|398373587|gb|EJN51503.1| preprotein translocase, SecY subunit [Atopobium sp. ICM58]
Length = 430
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 196/432 (45%), Gaps = 47/432 (10%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A++F ++RR+L T ++ + R+G FIP PG D + + + S+ +L
Sbjct: 1 MLGAFAQAFRTPDLRRKLLFTLFIMAVFRLGSFIPTPGVDSQAVQRCMAQESQASLLDLV 60
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQTGQAKLTQYTRYLT 120
Query: 132 LGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+ IL+A + ++ A SV ++ +++ G + W+ + I+E
Sbjct: 121 IFLGILQATTTISLARSGQLFQACSEDVIRDRSVMTFIMMIIVMMAGTGVIMWLGELITE 180
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G G SL+I I E L +G + +W + ++ + +V + V V +
Sbjct: 181 RGIGNGMSLLIFTSIAARLPEQLLS-----IGQAGKWGS-VAAIVALLLLVAIAVVYVEQ 234
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
R++ +QY K R+ T YIP IN SG+ PV+ + +LA P ++A
Sbjct: 235 AQRRIPVQYA--KRMIGRRQYGGTTT---YIPLKINMSGVIPVIFASSILALPPMIAQF- 288
Query: 305 GSPFWQHVKEILNPETSVGARPWV----------YYTIYAFFVFLFNIF--DIANLPKEI 352
+T G W+ Y TIYA F F I P E+
Sbjct: 289 -------------GKTEDGWVQWISAHFTQGSSFYLTIYALMTLFFTFFYTAITFNPDEV 335
Query: 353 ADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGF 412
AD + K G IP + G+ T EYL + G L L I+A ++ L+ +
Sbjct: 336 ADNMKKYGGFIPGYRAGRPTAEYLRYVINRITSAGALYLVIIALLPSLAIIPLKLSSSQM 395
Query: 413 SIGFTSVLIIVG 424
G T++LII+G
Sbjct: 396 PFGGTTLLIIIG 407
>gi|443664018|ref|ZP_21133341.1| preprotein translocase, SecY subunit [Microcystis aeruginosa
DIANCHI905]
gi|443331720|gb|ELS46365.1| preprotein translocase, SecY subunit [Microcystis aeruginosa
DIANCHI905]
Length = 422
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 207/417 (49%), Gaps = 21/417 (5%)
Query: 28 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQL 87
+R RL +T L+V+ R G F+P+PG DR + + S + + +L G L F L
Sbjct: 7 LRGRLLITLGLLVLLRFGMFVPIPGLDRARLAEIIQSNAALGILDLFTGGGLSTLGIFAL 66
Query: 88 GISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYS 146
GI P I ASI++Q+L +PSL L+K EG G KI +I+ G+AI++++ +
Sbjct: 67 GILPYINASIIVQLLTAALPSLEDLQKNEGEAGRRKIAQITRYIAFGWAIIQSIGI-TLG 125
Query: 147 LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTET 206
L + + ++ + T LV G+M + WI + I+E G G G+SL+I V I+ +T
Sbjct: 126 LLVANGVVAGTLPSIAATVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKT 185
Query: 207 LYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE-- 264
L ++ + ++ LL VF ++ + V V EG R++ + SA R+
Sbjct: 186 LGDTITFAQQGGRQAIAQVVILLLVFLVMIIGIVFVQEGTRRI-------PIVSARRQVG 238
Query: 265 DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGA 324
E Y+P +N G+ P++ + +L P L L P V ++L +
Sbjct: 239 RRLYRERTSYLPLRLNQGGVMPIIFASAVLVLPFQLVQAL--PTDNQVGQVLVQLVNA-L 295
Query: 325 RP--WVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKI 379
RP W Y Y+ + F+ F I N PK+++ L KMG IP ++PG AT YL +
Sbjct: 296 RPDSWGYVAFYSLLILGFSFFYASLIVN-PKDMSQNLKKMGTSIPGIRPGTATTNYLEGV 354
Query: 380 QASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
G L LS++AT T+++ + +G TS+LI+VG I+ + Q Y
Sbjct: 355 LNRLTLLGALFLSLVATIPTLVESA-TGVTTFRGLGATSLLILVGVAIDTAKQIQTY 410
>gi|332289208|ref|YP_004420060.1| preprotein translocase subunit SecY [Gallibacterium anatis UMN179]
gi|330432104|gb|AEC17163.1| preprotein translocase subunit SecY [Gallibacterium anatis UMN179]
Length = 441
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 206/443 (46%), Gaps = 28/443 (6%)
Query: 17 NNAAESFFKSEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 75
N + SE++RRL FV LIV RIG FIP+PG D ++ Q VD
Sbjct: 8 QNRSTQSGTSELKRRLLFVLGALIVF-RIGSFIPVPGIDSAVLAQVIEQQKGTIVDMFNM 66
Query: 76 F--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
F GA + S F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L
Sbjct: 67 FSGGALSRASVFALGIMPYISASIIIQLLTSVYPALAELKKEGEAGRRKISKYTRYSTLA 126
Query: 134 FAILEAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
A ++A+ ++ LP + + LV G M + W+ + I+E G G G
Sbjct: 127 LATIQAIGIST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGVGNGI 185
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SLII GI+ G + + Q + +L + VF VT + V V G R++ +
Sbjct: 186 SLIIFAGIVAGLPSAIAHTIEQARQGQMHLLVLLLIAVVVFA-VTYFVVFVERGQRRLVV 244
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----P 307
Y A + + ++P +N +G+ P + + ++ FP+ + G
Sbjct: 245 NY-----AKRQQGRHMLAAQSSHLPLKVNMAGVIPAIFASSIILFPATITQWFGQGQGLD 299
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPN 365
+ + +L+P +P +Y +YA + F+ F A P++ AD L K GA +P
Sbjct: 300 WLNDLSMLLHP-----GQP-LYLILYAVAIIFFSFFYSAMQYNPRDTADNLKKSGAFLPG 353
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T Y+ KI GGL ++ + I+ N F G TS+LI+V
Sbjct: 354 IRPGEQTSRYIDKIMTRLALIGGLYVTFVCLVPYIMTSAW---NVQFYFGGTSLLIVVVV 410
Query: 426 IIELRRSYQAYNVMPSLSKALRR 448
I++ Q++ + L++
Sbjct: 411 IMDFIAQVQSHLMSSQYESVLKK 433
>gi|403510172|ref|YP_006641810.1| preprotein translocase, SecY subunit [Nocardiopsis alba ATCC
BAA-2165]
gi|402800397|gb|AFR07807.1| preprotein translocase, SecY subunit [Nocardiopsis alba ATCC
BAA-2165]
Length = 437
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 207/446 (46%), Gaps = 56/446 (12%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---- 76
+F ++R +L T ++ I R+G IP PG D I + + + D+ G +
Sbjct: 7 RAFRTPDLRNKLLFTLFILTIFRLGSVIPAPGIDSAAIREQMETITAA--DQSGVYALVN 64
Query: 77 ----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
GA L+L+ F LG+ P I ASI++ +L ++P L L+KEG G KI Y +++L
Sbjct: 65 LFSGGALLQLAVFALGVMPYITASIIINLLTVVIPRLESLKKEGQAGQSKITQYTRYLTL 124
Query: 133 GFAILEAV-IVACY--------SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTIS 183
A+L+A IVA ++P S Y + + ++ F + G + W+ + I+
Sbjct: 125 MLAVLQATSIVAMARTGALFQNAIPVSSYMPNQDILTLVTIVFTMTAGTAIIMWMGELIT 184
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLG--SSVRWWPFMLGLLGVFTIVTMWAVV 241
E G G G SL+I +T+ + S ++G W F + + ++T AVV
Sbjct: 185 ERGVGNGMSLLI-------FTQVIAVFPSAIMGLYEERSVWIFTIICMAGLALIT--AVV 235
Query: 242 VTEGC-RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
E R++ +QY + S YIP +N +G+ PV+ + LL P ++
Sbjct: 236 FMEQAQRRIPVQYAKRMVGRRMYGGS-----STYIPLKVNQAGIIPVIFASSLLYLPQLI 290
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFV----FLFNIFDIANLPKEIADYL 356
+LG V + G P VY + AFFV F F I P E+AD +
Sbjct: 291 VGLLGQDSTHPVAQFFQTYFLTGTHP-VY--MAAFFVMIVGFAFFYVAITFNPTEVADNM 347
Query: 357 NKMGARIPNVKPGKATIEY----LTKIQASTRFWGGL--LLSILATSSTILDHYLRRINE 410
K G IP ++PG+ T EY LT++ + G+ LL ++A +T D
Sbjct: 348 KKYGGFIPGIRPGRPTAEYLDYVLTRLTTPGSLYLGVIALLPMVALGATGADM------- 400
Query: 411 GFSIGFTSVLIIVGSIIELRRSYQAY 436
F G TS+LI+VG ++ + +++
Sbjct: 401 NFPFGGTSILIMVGVGLDTVKQIESH 426
>gi|425436573|ref|ZP_18817008.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9432]
gi|425452029|ref|ZP_18831848.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
7941]
gi|389678654|emb|CCH92482.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9432]
gi|389766375|emb|CCI07997.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
7941]
Length = 439
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 214/433 (49%), Gaps = 29/433 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL +T L+V+ R G F+P+PG DR + + S + + +L
Sbjct: 10 TAQETFMQMAQAAGLRGRLLITLGLLVLLRFGMFVPIPGLDRARLAEIIQSNAALGILDL 69
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 132
G L F LGI P I ASI++Q+L +PSL L+K EG G KI +I+
Sbjct: 70 FTGGGLSTLGIFALGILPYINASIIVQLLTAALPSLEDLQKNEGEAGRRKIAQITRYIAF 129
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
++I++++ + L + + ++ + T LV G+M + WI + I+E G G G+S
Sbjct: 130 AWSIIQSIGI-TLGLLVANGVVAGTLPSIAATVLALVAGSMFVMWISELITERGLGNGAS 188
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
L+I V I+ +TL ++ + ++ LL VF ++ + V V EG R++
Sbjct: 189 LLIFVNIVAVLPKTLGDTITFAQQGGRQAIAQVVILLLVFLVMIIGIVFVQEGTRRI--- 245
Query: 253 YYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPF 308
+ SA R+ E Y+P +N G+ P++ + +L P L L +P
Sbjct: 246 ----PIVSARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLVLPFQLVQALPTDNPV 301
Query: 309 WQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGARI 363
Q + +++N RP W Y Y+ + F+ F I N PK+++ L KMG I
Sbjct: 302 GQVLVQLVN-----ALRPDSWGYVAFYSLLILGFSFFYASLIVN-PKDMSQNLKKMGTSI 355
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PG AT YL + G L LS++AT T+++ + +G TS+LI+V
Sbjct: 356 PGIRPGTATTNYLEGVLNRLTLLGALFLSLVATVPTVVESA-TGVTTFRGLGATSLLILV 414
Query: 424 GSIIELRRSYQAY 436
G I+ + Q Y
Sbjct: 415 GVAIDTAKQIQTY 427
>gi|46399705|emb|CAF23154.1| putative preprotein translocase SecY [Candidatus Protochlamydia
amoebophila UWE25]
Length = 493
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 211/428 (49%), Gaps = 42/428 (9%)
Query: 41 ISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-----ELGDFGAELKLSFFQLGISPQIVA 95
+ R+G FIP+PG + + + GS + ++ GA +++ LG++P I A
Sbjct: 64 VCRLGSFIPVPGINGEVAVSFFRHATGGSQNLFQMVDIFSGGAFSQMTVIALGVTPYISA 123
Query: 96 SILMQVLCHIVPSLVQ-LRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAA 154
SI+MQ+L +VPSL + LR+ G G KI + ++++ + L++ + A Y+L ++
Sbjct: 124 SIIMQLLVALVPSLQRDLRENGDAGKRKINRWTRFLTIVLSFLQSALFAKYALQINLSRP 183
Query: 155 SHSVKHVM-VTAF------------LLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
++ +TAF + G M + W+ + I+E G G G SLIIC+GIL+
Sbjct: 184 GIVAGELLDITAFGLPWLFYLITIATMTTGTMFLMWVGEQITERGIGNGISLIICLGILS 243
Query: 202 GYTETLYKMLSQLLGSSVR----WWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
+ + QL S + +L L+ VF +VT+ ++V +G R++ LQ+
Sbjct: 244 QIPTAMGLIFQQLNLDSQEPGQMNFSTILVLISVFVVVTLATILVIQGHRRIPLQH---- 299
Query: 258 LASAAREDSPITEVE---PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 314
AR EV+ YIP IN +G+ PV+ + LL FP+ L + +G W + E
Sbjct: 300 ----ARRVVGRKEVQGGSSYIPLKINYAGVIPVIFASSLLMFPATLGTFVGRGNW--LGE 353
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKAT 372
+ N + G +Y ++ + F F A P +IA + K GA IP ++ GK T
Sbjct: 354 VANWLSPGGP---LYLVLFVALIIFFTYFWTATQFRPDQIASDMKKNGAFIPGIRQGKPT 410
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINE-GFSIGFTSVLIIVGSIIELRR 431
+YL G + L+++A T++ L + G T++LI+VG +++ +
Sbjct: 411 QDYLESTMNRVTLLGAVFLALIAILPTMIGSVLGVPPTISYFFGGTALLILVGVVLDTMK 470
Query: 432 SYQAYNVM 439
+++ +M
Sbjct: 471 QVESHLLM 478
>gi|422301329|ref|ZP_16388697.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9806]
gi|389792297|emb|CCI11968.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9806]
Length = 439
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 198/402 (49%), Gaps = 25/402 (6%)
Query: 45 GYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCH 104
G F+P+PG DR + + S + + +L G L F LGI P I ASI++Q+L
Sbjct: 41 GMFVPIPGLDRARLAEIIQSNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLLTA 100
Query: 105 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 163
+PSL L+K EG G KI +I+ G+AI++++ + L + + ++ +
Sbjct: 101 ALPSLEDLQKNEGEAGRRKIAQITRYIAFGWAIIQSIGI-TLGLLVANGVVAGTLPSIAA 159
Query: 164 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP 223
T LV G+M + WI + I+E G G G+SL+I V I+ +TL ++ +
Sbjct: 160 TVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQAIA 219
Query: 224 FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSP--ITEVEPYIPFNINP 281
++ LL VF ++ + V V EG R++ + SA R+ E Y+P +N
Sbjct: 220 QVVILLLVFLVMIIGIVFVQEGTRRI-------PIVSARRQVGRRLYRERTSYLPLRLNQ 272
Query: 282 SGMQPVLTTTYLLAFPSILASIL--GSPFWQHVKEILNPETSVGARP--WVYYTIYAFFV 337
G+ P++ + +L P L L +P Q + +++N RP W Y Y+ +
Sbjct: 273 GGVMPIIFASAVLVLPFQLVQALPTDNPVGQVLVQLVN-----ALRPDSWGYVAFYSLLI 327
Query: 338 FLFNIF---DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSIL 394
F+ F I N PK+++ L KMG IP ++PG AT YL + G L LS++
Sbjct: 328 LGFSFFYASLIVN-PKDMSQNLKKMGTSIPGIRPGTATTNYLEGVLNRLTLLGALFLSLV 386
Query: 395 ATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
AT T+++ + +G TS+LI+VG I+ + Q Y
Sbjct: 387 ATVPTVVESA-TGVTTFRGLGATSLLILVGVAIDTAKQIQTY 427
>gi|284049237|ref|YP_003399576.1| preprotein translocase subunit SecY [Acidaminococcus fermentans DSM
20731]
gi|283953458|gb|ADB48261.1| preprotein translocase, SecY subunit [Acidaminococcus fermentans
DSM 20731]
Length = 418
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 222/437 (50%), Gaps = 36/437 (8%)
Query: 12 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 71
++S L+N ++ +E+R+++F T + ++ R G IP+PG + +I + F SG++
Sbjct: 1 MASALDNLLKA---TELRKKVFFTLAMFIVFRAGTQIPVPGVNAAMIER---LFTSGNLF 54
Query: 72 ELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
L D GA K S F + I+P I ASI+ Q+L ++P+L + KEG +G +KI
Sbjct: 55 GLLDLFSGGALSKFSIFAMSITPYINASIITQLLTVVIPTLEEWSKEGAEGAKKINKINR 114
Query: 129 WISLGFAILEAVIVACYSLPYSIYAASH-----SVKHVMVTAFLLVCGAMTMSWICDTIS 183
+ ++G ++A+ + Y + AA + S +++T L G++ + WI + I+
Sbjct: 115 YAAVGLGAIQAI-----GMAYGLRAAVNNPDFFSFAMIVIT---LTAGSLLLMWIGEQIT 166
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFML-GLLGVFTIVTMWAVVV 242
G G G SLII GI++ L + L ++ + ++ +L V + M+ V +
Sbjct: 167 AKGIGNGISLIIFAGIISRLPNGLAVIGRYLQAGTINVFNVLIFAVLAVLMV--MFVVAI 224
Query: 243 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
T RKV +Q Y ++ T YIP +N +G+ P++ + +L FP +A
Sbjct: 225 TVAYRKVPVQ-YAKRIVGRKMYGGHTT----YIPLKVNQAGVMPIIFASSVLMFPVTIAQ 279
Query: 303 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGAR 362
+ P+ Q V L T + + +Y + FF + + + N+P +++D + K G
Sbjct: 280 FIKIPWIQKVAGYLAWGTPL--QTSLYILLILFFTYFYTAVSL-NIP-DMSDNIKKYGGF 335
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++PGK T +YL K+ G + L+ +A ++ +L I+ G G T++LI+
Sbjct: 336 IPGLRPGKPTTDYLDKVMNRITLAGAVFLAFIAIMPNMI-VWLTGIS-GVYFGGTALLIV 393
Query: 423 VGSIIELRRSYQAYNVM 439
VG ++ + ++ +M
Sbjct: 394 VGVALDTMKQVESMTLM 410
>gi|338811108|ref|ZP_08623344.1| preprotein translocase subunit SecY [Acetonema longum DSM 6540]
gi|337276931|gb|EGO65332.1| preprotein translocase subunit SecY [Acetonema longum DSM 6540]
Length = 418
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 220/438 (50%), Gaps = 46/438 (10%)
Query: 18 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
A + FK +E+R+++ T + ++ R G IP+PG + +I Q F +G++ L D
Sbjct: 3 GALSNVFKITELRQKVVFTLAMFLVFRAGTHIPVPGVNAAVIEQ---LFTTGNLFGLMDL 59
Query: 77 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
GA K S F + I+P I ASI+MQ+L +VP Q KEG +G +KI + ++
Sbjct: 60 FSGGALSKFSVFAMSITPYINASIIMQLLTIVVPKFEQWAKEGEEGRKKITQLTRYGTVL 119
Query: 134 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
++A+ +A Y L +I + S+ ++++ A L G + + W+ + I+E G G G SL
Sbjct: 120 LGFIQAIGMA-YGLRVAII--NPSIGYILLIALTLTAGTVFLMWLGEQITEKGIGNGISL 176
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV----VTEGCRKV 249
II GI++ + LY + L ++ +G L +F I+ + +V + +G RK+
Sbjct: 177 IIFAGIVSRLPDGLYVLYQYLAAGTIH-----IGNLLLFIIIALAMIVFVIAIQQGQRKI 231
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 309
+QY A +IP IN +G+ P++ + +L FP +A + +
Sbjct: 232 PVQY-----AKRVVGRKTYGGHSTHIPLKINQAGVIPIIFASSVLMFPVTIAQFVDVGWV 286
Query: 310 QHVK---EILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKMGARI 363
+ + E P +V +YA + F F A N+P ++A+ + K G I
Sbjct: 287 KTMASWFEWGTPLQTV---------LYALMILFFTYFYTAVTLNIP-DMAENMKKYGGFI 336
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSVLI 421
P ++PGK T +YL ++ + G + L+++A IL +++ + +G G T++LI
Sbjct: 337 PGLRPGKPTADYLDRVMSRITLAGAVFLALIA----ILPNFVAAVTGIKGVYFGGTALLI 392
Query: 422 IVGSIIELRRSYQAYNVM 439
+VG ++ + +A +M
Sbjct: 393 VVGVALDTMKQIEALILM 410
>gi|227499175|ref|ZP_03929310.1| preprotein translocase subunit secY [Acidaminococcus sp. D21]
gi|226904622|gb|EEH90540.1| preprotein translocase subunit secY [Acidaminococcus sp. D21]
Length = 418
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 214/441 (48%), Gaps = 41/441 (9%)
Query: 12 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 71
++S L+N ++ +E+R++L T + ++ R G IP+PG + +I Q F +G++
Sbjct: 1 MASALDNLMQA---TELRKKLSFTLAMFIVFRAGTQIPVPGVNAAMIEQ---LFNNGNLF 54
Query: 72 ELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
L D GA K S F + I+P I ASI+ Q+L ++P+L + KEG +G +KI
Sbjct: 55 GLLDLFSGGALSKFSIFAMSITPYINASIITQLLTVVIPTLEEWSKEGAEGAKKINKINR 114
Query: 129 WISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+ ++ +++A+ +A Y L ++ + +V + L G + + WI + I+ G G
Sbjct: 115 YAAVVLGVIQAIGMA-YGLRVAVNNPTFFSYLTIVVS--LTAGTILLMWIGEQITARGIG 171
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFML-GLLGVFTIVTMWAVVVTEGCR 247
G SLII GI++ + M L ++ + ++ +L V + M+ V +T R
Sbjct: 172 NGISLIIFAGIISRLPSGMAVMYRYLQAGTINIFNLLIFAVLAVLMV--MFVVAITVAYR 229
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
K+ +QY A YIP +N +G+ P++ + +L FP +A + P
Sbjct: 230 KIPVQY-----AKRVVGRKMYGGHTTYIPLKVNQAGVMPIIFASSVLMFPVTIAQFIQVP 284
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKMGARIP 364
+ Q V L T + T+Y + F F A N+P E+ D + K G IP
Sbjct: 285 WVQKVASYLQWGTPLQT------TLYVLLILFFTYFYTAVSLNIP-EMCDNIKKYGGFIP 337
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PGK TI YL KI G + L+ +A I+ +L I+ G G T++LI+VG
Sbjct: 338 GLRPGKPTIAYLDKIMNRITLAGAVFLAFIAVMPNIIV-WLTGIS-GIYFGGTALLIVVG 395
Query: 425 SIIE---------LRRSYQAY 436
++ L R YQ +
Sbjct: 396 VALDTMKQVESMVLMRHYQGF 416
>gi|407685271|ref|YP_006800445.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'English Channel 673']
gi|407701510|ref|YP_006826297.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Black Sea 11']
gi|407246882|gb|AFT76068.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'English Channel 673']
gi|407250657|gb|AFT79842.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Black Sea 11']
Length = 439
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 212/445 (47%), Gaps = 31/445 (6%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 75
L++ A+S SE++ RL IV+ R+G ++P+PG D ++ D G++ E+ +
Sbjct: 6 LDSGAKSGL-SELKARLLFVLGAIVVFRLGSYVPIPGIDPAVL-ADLFEQQKGTIVEMFN 63
Query: 76 F---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
GA + S LGI P I ASI+MQ+L + P +V+L+KEG G KI Y +++L
Sbjct: 64 MFSGGALERASVLALGIMPYITASIIMQLLSVVHPPMVELKKEGEAGRRKISQYTRYLTL 123
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
AI +++ ++ LP I + LV G M + W+ + I+E G G G
Sbjct: 124 VLAIFQSIGIST-GLPNLINGLVINPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNG 182
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKV 249
S++I GI+ G + + Q + F+L L+GV I + VV E G R++
Sbjct: 183 ISILIFAGIVAGLPTAIGQTAEQARQGDINLL-FLL-LIGVIVIALTYLVVFVERGQRRI 240
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---S 306
+ Y A + ++P +N +G+ P + + ++ FP +A G S
Sbjct: 241 VVNY-----AKRQQGRQVFAAQSTHLPLKVNIAGVIPPIFASSIILFPGTIAGWFGQNES 295
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARI 363
W Q V +L+P +P +Y +YA + F F A + P++ AD L K GA I
Sbjct: 296 TAWLQDVALMLSP-----GQP-LYVMLYAAAIIFFCFFYTALVFNPRDTADNLKKSGAFI 349
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PG+ T Y+ K+ G L ++ + + + L N F G TS+LIIV
Sbjct: 350 PGIRPGEQTSRYIDKVMTRLTLAGALYITFIC---LVPEFMLIAWNVPFYFGGTSLLIIV 406
Query: 424 GSIIELRRSYQAYNVMPSLSKALRR 448
I++ Q + + L++
Sbjct: 407 VVIMDFMAQVQTHLMSSQYESVLKK 431
>gi|33862096|ref|NP_893657.1| preprotein translocase subunit SecY [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33634314|emb|CAE19999.1| preprotein translocase SecY subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 439
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 209/436 (47%), Gaps = 49/436 (11%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFG 77
F E+R R+ T L+++ R+G +IP+PG DR + SF+ +G G
Sbjct: 19 FLNKELRNRVLTTLGLLLLVRLGIYIPMPGIDRV----AFKSFIDQGGQLIGFLDIFTGG 74
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAI 136
L F LGI P I ASI++Q+L +P L L+K EG G KI ++SLG+
Sbjct: 75 GISTLGIFALGILPFINASIIIQLLTASLPVLEDLQKNEGEAGRRKIAQITRYVSLGWGF 134
Query: 137 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
L+++I + Y+I S + V+ T+ LV G+M + W + I+E G GQG+SL+I
Sbjct: 135 LQSIIFSLILRQYAIEGISETA-FVLQTSIALVTGSMIVMWFSEIITEKGIGQGASLVIF 193
Query: 197 VGILTGYTETLYKMLSQ--------LLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
+ I+ + L + + +LG +V LLGVF + + + V EG R+
Sbjct: 194 LNIVATLPKALSSTIEKAQTGDRGDVLGIAV--------LLGVFLLTIVGIIFVQEGARR 245
Query: 249 VKLQYYGFKLASAARE---DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
+ + SA R+ S + + Y+P +N G+ P++ + L+ P +A++ G
Sbjct: 246 I-------PIVSAKRQIGNSSLLPTRQSYLPLKLNAGGVMPIIFASALIFLPITVANVTG 298
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARI 363
+P + LNP +S PW Y + + F+ F + P ++A L K G I
Sbjct: 299 NPILIKIAGSLNPGSS---NPWPYALTFFALILGFSYFYASLTINPVDVASNLKKGGVAI 355
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRR---INEGFSIGFTSVL 420
P V+PG T YL+ IQ LL + S I+ + R + +G TS+L
Sbjct: 356 PGVRPGSNTANYLSGIQNRLT----LLGGLFLGSVAIIPAAVERATNVQTFQGLGATSLL 411
Query: 421 IIVGSIIELRRSYQAY 436
I+VG I+ + Q Y
Sbjct: 412 ILVGVAIDTAKQIQTY 427
>gi|227485505|ref|ZP_03915821.1| possible preprotein translocase subunit SecY [Anaerococcus
lactolyticus ATCC 51172]
gi|227236504|gb|EEI86519.1| possible preprotein translocase subunit SecY [Anaerococcus
lactolyticus ATCC 51172]
Length = 424
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 195/391 (49%), Gaps = 27/391 (6%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
+ EIR++ + T +++VI R+G IP+P D + + Y + VD L G L
Sbjct: 11 EEEIRKKFYFTLMMLVIYRLGNNIPIPFIDTKALANAYSNIEGTLVDYLNMLTGGGLSTL 70
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LG+ P I ASI+MQ+L ++P L +L +EG G + I+ Y ++++ AI +A+ +
Sbjct: 71 SIFALGVQPYITASIVMQLLTVVIPRLEELTREGEQGRKTIQKYTRYVTIALAIFQAIAI 130
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
++ +A+ K VM +L+ G M ++W+ +T++E G G G+SL+I +GI+
Sbjct: 131 TNGLYGAALSSATGFQKIVM--NVVLIGGTMFVTWMGETMTEKGLGNGTSLLIFMGIIAS 188
Query: 203 YTETLYKMLSQLL--GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGF 256
+ T+ + L +SV M+ +L VF ++ + V+++EG R++ +QY G
Sbjct: 189 FPRTISRWKEGLHYNTTSVLAIAIMV-ILIVFIVIAV--VLISEGERRIPIQYAKRVVGR 245
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
K+ +IP +N + P++ + +LA PS ++ G +
Sbjct: 246 KMYGGQ---------STHIPVKVNMGNVMPIIFASAVLAIPSTVSLFFGGGGQSGLTAFF 296
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIE 374
N +T+ G VY TI + + +F F I E A L + G +P ++PGK T +
Sbjct: 297 N-KTAFGF--AVYLTIQSALILIFAYFYNQIQFNTVEYAKQLQQNGGFVPGIRPGKPTSD 353
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYL 405
+L + F G + L++L I L
Sbjct: 354 FLATVSTRITFIGSICLALLTIVPAIASRLL 384
>gi|417933004|ref|ZP_12576338.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK182B-JCVI]
gi|340772923|gb|EGR95418.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK182B-JCVI]
Length = 439
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 207/438 (47%), Gaps = 29/438 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ A +F ++RR++ T ++ + R+G IP+P + I SGS L
Sbjct: 1 MLSAFANAFRTPDLRRKILFTLFILAVFRLGSVIPVPNVNVSNINTCVTQASSGSSAGLY 60
Query: 75 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
GA LKL+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SMISLFSGGALLKLAIFALGIMPYITASIILQLLTVVIPKLETLKKEGASGQNKITQYTR 120
Query: 129 WISLGFAILEAVIVACYSLPYSIYAA------SHSVKHVMVTAFLLVCGAMTMSWICDTI 182
+++L +L+A + ++ S SV V+V + G + W+ + +
Sbjct: 121 YLTLVLGLLQATAFVTLATSGRLFTCSLPVVYSTSVFEVVVMILTMTAGTTIVMWMGELV 180
Query: 183 SESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
++ G G G S++I I + ++L+ K+ G + W F+ L+ + M AV
Sbjct: 181 TDRGIGNGMSIMIFTQIAARFPDSLWAIKVARNGAGQAHAW--FIFSLVIAIGLAVMAAV 238
Query: 241 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V + +G R++ +QY + S YIP +N SG+ PV+ + +L P +
Sbjct: 239 VFIEQGQRRIPVQYAKRMVGRRMFGGS-----TTYIPLKVNQSGVIPVIFASSILYLPVL 293
Query: 300 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLN 357
A+ P K I + T G P VY +Y + F F +A P E++D +
Sbjct: 294 YATF--RPQTSAAKWIGHYFTR-GDHP-VYNIVYFLLIIFFCYFYVAITFDPVEMSDNMK 349
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++ GK T +YL + + G L L +++ T+ YL N+ F G T
Sbjct: 350 KYGGFIPGIRAGKPTEDYLAYVLSRLTAPGSLYLGLISMIPTLAFVYLHA-NQNFPFGGT 408
Query: 418 SVLIIVGSIIELRRSYQA 435
S+LIIVG ++ + ++
Sbjct: 409 SILIIVGVALDTVKQVES 426
>gi|374300562|ref|YP_005052201.1| preprotein translocase subunit SecY [Desulfovibrio africanus str.
Walvis Bay]
gi|332553498|gb|EGJ50542.1| preprotein translocase, SecY subunit [Desulfovibrio africanus str.
Walvis Bay]
Length = 440
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 200/419 (47%), Gaps = 23/419 (5%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E+R+RLF T +L+ + R+G IP+PG D + + D+ + VS ++ L D G LS
Sbjct: 14 ELRKRLFWTFLLLAVYRVGIHIPVPGVDAQAL-SDFFATVSNTLFGLFDMFSGGGLSNLS 72
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILEAVIV 142
LGI P I ASI++Q+L + P L +L KE G G +KI Y + ++ +++ + +
Sbjct: 73 ILALGIMPYISASIILQLLTVVSPELSRLSKEEGAAGRKKITQYTRYGTVLITVVQGLAI 132
Query: 143 AC-----YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
A S + + +VT + G + + WI + I+E G G G SLII
Sbjct: 133 AIGLENMTSPTGAPIVVTAGWGFRLVTIVTMTAGTIFVMWIGEQITEKGIGNGISLIIFA 192
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
GI+ G L +L+ + +L ++ V V ++ V + G R++ + Y
Sbjct: 193 GIVAGIPRALINT-GRLVSTGEMSLFILLFIMAVMVCVLVFIVFMERGQRRIPIHY---- 247
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 317
A ++P IN +G+ P + + +L FP+ LA+ Q + N
Sbjct: 248 -AKRMMGRKMFGGQTTHLPLRINTAGVIPPIFASSILMFPATLANFSDIEILQRISGWFN 306
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
P + + +V I+ + + IFD P+ IA+ + K G IP ++PG T EY+
Sbjct: 307 PTSVLYNVLFVGIIIFFCYFYTAIIFD----PQNIAENIRKQGGFIPGIRPGAKTKEYID 362
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
K+ A WG L +S + +L + + N + G TS+LI+VG ++ ++Y
Sbjct: 363 KVLARITLWGSLYISAICVLPMLL---IAQFNVPYYYGGTSLLIVVGVAMDFMGKIESY 418
>gi|425462438|ref|ZP_18841912.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9808]
gi|389824597|emb|CCI26445.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9808]
Length = 439
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 214/433 (49%), Gaps = 29/433 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL +T L+V+ R G F+P+PG DR + + S + + +L
Sbjct: 10 TAQETFMQMAQAAGLRGRLLITLGLLVLLRFGMFVPIPGLDRARLAEIIQSNAALGILDL 69
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 132
G L F LGI P I ASI++Q+L +PSL L+K EG G KI +I+
Sbjct: 70 FTGGGLSTLGIFALGILPYINASIIVQLLTAALPSLEDLQKNEGEAGRRKIAQITRYIAF 129
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
++I++++ + L + + ++ + T LV G+M + WI + I+E G G G+S
Sbjct: 130 AWSIIQSIGI-TLGLLVANGVVAGTLLSIAATVLALVAGSMFVMWISELITERGLGNGAS 188
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
L+I V I+ +TL ++ + ++ LL VF ++ + V V EG R++
Sbjct: 189 LLIFVNIVAVLPKTLGDTITFAQQGGRQAIAQVVILLLVFLVMIIGIVFVQEGTRRI--- 245
Query: 253 YYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPF 308
+ SA R+ E Y+P +N G+ P++ + +L P L L +P
Sbjct: 246 ----PIVSARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLVLPFQLVQALPTDNPV 301
Query: 309 WQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGARI 363
Q + +++N RP W Y Y+ + F+ F I N PK+++ L KMG I
Sbjct: 302 GQVLVQLVN-----ALRPDSWGYVAFYSLLILGFSFFYASLIVN-PKDMSQNLKKMGTSI 355
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PG AT YL + G L LS++AT T+++ + +G TS+LI+V
Sbjct: 356 PGIRPGTATTNYLEGVLNRLTLLGALFLSLVATVPTVVESA-TGVTTFRGLGATSLLILV 414
Query: 424 GSIIELRRSYQAY 436
G I+ + Q Y
Sbjct: 415 GVAIDTAKQIQTY 427
>gi|84494766|ref|ZP_00993885.1| preprotein translocase SecY [Janibacter sp. HTCC2649]
gi|84384259|gb|EAQ00139.1| preprotein translocase SecY [Janibacter sp. HTCC2649]
Length = 438
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 200/442 (45%), Gaps = 37/442 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F ++RR++ T +I + R+G +P PG LI Q + D LG
Sbjct: 1 MLTAFGRAFKTPDLRRKILFTLGIIALYRLGAQVPTPGVSYSLI-QACQKGAGDANDLLG 59
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+LS F LGI P I ASI++Q+L ++P L+KEG G K+ Y +
Sbjct: 60 LANLFSGGALLQLSIFALGIMPYITASIIIQLLTVVIPKFEALKKEGQAGQTKMTQYTRY 119
Query: 130 ISLGFAILE-AVIVACYSLPYSIYA--------ASHSVKHVMVTAFLLVCGAMTMSWICD 180
+++ A+L+ A + P ++A S+ +++ + G + W+ +
Sbjct: 120 LTIALAVLQSATFITFAQNPSQLFANPACTNILTDDSIVTILIMVLTMTAGTGLVMWLGE 179
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
+++ G G G S++I I + L+ + + RW F+ +L F I+ + V
Sbjct: 180 LVTDHGVGNGMSIMIFTSIAASFPGALWAIQQK----EGRWDIFIGIILMGFVIIAL-VV 234
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R++ +QY + + YIP +N +G+ PV+ + LLA P++L
Sbjct: 235 FVEQSQRRIPVQYAKRMVGRRVYGGT-----STYIPLKVNMAGVIPVIFASSLLALPTLL 289
Query: 301 ASIL-----GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIA 353
A SP W + G W Y Y + F F I P E+A
Sbjct: 290 AQFNRKADGTSPGWVDWID----SNYAGGDTWAYGATYTALILFFTFFYVSITFNPTEVA 345
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS 413
D + K G IP ++ G+ T EYL + G + L++++ +L L N+ F
Sbjct: 346 DNMKKYGGFIPGIRAGRPTAEYLQYVLTRITVPGAIYLALISIIP-LLALVLVGANQNFP 404
Query: 414 IGFTSVLIIVGSIIELRRSYQA 435
G TS+LIIVG +E + ++
Sbjct: 405 FGGTSILIIVGVGLETVKQIES 426
>gi|441496886|ref|ZP_20979112.1| Preprotein translocase secY subunit [Fulvivirga imtechensis AK7]
gi|441439359|gb|ELR72677.1| Preprotein translocase secY subunit [Fulvivirga imtechensis AK7]
Length = 437
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 213/434 (49%), Gaps = 52/434 (11%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV-DELGDF--GAELKL 82
++R R+ T +++ R+G FI LPG D P S G + D L F G+ +
Sbjct: 15 EDLRIRILNTLGFLIVFRLGSFIVLPGVD----PDALGSGAQGGIFDLLNTFLGGSFSRA 70
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L VP +L+KEG G +++ +++ + ++
Sbjct: 71 SIFALGIMPYISASIVIQLLTVAVPYFQKLQKEGESGRKRLTQITRVLTIAITLAQSAGY 130
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
++P + S V + +LV G M W+ + I++ G G G S++I +GI++
Sbjct: 131 LAATIPSEAVLYTQSFFQVS-SMIILVAGTMFCMWLGEKITDKGIGNGISMLIMIGIISR 189
Query: 203 Y-----TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY---- 253
+ +E + + +S L F+L ++ +F +V M V++T+ R++ +QY
Sbjct: 190 FPGSIVSEAMTRGMSGALA-------FVLEIVALFFVV-MAVVMLTQAVRRIPIQYAKQV 241
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
G KL R+ YIP +N SG+ P++ L+ P ++A I W+
Sbjct: 242 IGNKLYGGKRD---------YIPLKVNASGVMPIIFAQALMFIPPLIAGI-----WKE-S 286
Query: 314 EILNPETSVGARP--WVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPG 369
E+ S A P W Y ++ + LF F I P +IAD L + G IP +KPG
Sbjct: 287 EVGAYIGSTFADPYSWQYNLVFGILILLFTFFYTAITVNPNDIADNLKRNGGFIPGIKPG 346
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRR--INEGFS--IGFTSVLIIVGS 425
K T E++ ++ G + L+I+A +L + + I+ F+ G TS+LI+VG
Sbjct: 347 KQTSEFIDQVLTKITLPGSIFLAIVA----VLPAFAVKAGISPNFAQFYGGTSLLIMVGV 402
Query: 426 IIELRRSYQAYNVM 439
I++ + ++Y +M
Sbjct: 403 ILDTLQQIESYLLM 416
>gi|357401188|ref|YP_004913113.1| Preprotein translocase subunit secY [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|386357251|ref|YP_006055497.1| preprotein translocase subunit SecY [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|337767597|emb|CCB76308.1| Preprotein translocase subunit secY [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|365807759|gb|AEW95975.1| preprotein translocase subunit SecY [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 438
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 205/438 (46%), Gaps = 29/438 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T ++V+ R+G +PLPG D R + Q + G+ G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGILVLFRLGQNVPLPGVDYRNVAQ-CIKEAGGNGGLFG 59
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+L+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 MINLFSGGALLQLTIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGQTKITQYTRY 119
Query: 130 ISLGFAILEAVIVACYSLPYSIY---------AASHSVKHVMVTAFLLVCGAMTMSWICD 180
++L +L+ + + +++ S+ V + G + + W+ +
Sbjct: 120 LTLALGVLQGTGLVATAQSGTLFRTCAVGNQVVPDTSIFRTTVMVITMTAGTVMIMWLGE 179
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I++ G G G S+++ I G+ +L+ + G V W ++ + + V
Sbjct: 180 LITDRGIGNGMSILMFTSIAAGFPGSLWSIKKS--GKIVSGWGEFFIVIAIGLAMVCLVV 237
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 292
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLN 357
G+ + I + + G P+ Y T+Y + F F +A N P+E+AD +
Sbjct: 293 VQFSGNSTAGWARWI-STNLTKGDHPF-YLTLYFLLIVFFAFFYVAISFN-PEEVADNMK 349
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++ G+ T EYL + + G L L ++A T+ + F G T
Sbjct: 350 KYGGFIPGIRAGRPTAEYLGYVLNRITWPGSLYLGLIALVPTVAIALFNG-TQNFPFGGT 408
Query: 418 SVLIIVGSIIELRRSYQA 435
S+LIIVG +E + ++
Sbjct: 409 SILIIVGVGLETVKQIES 426
>gi|296131856|ref|YP_003639103.1| preprotein translocase subunit SecY [Thermincola potens JR]
gi|296030434|gb|ADG81202.1| preprotein translocase, SecY subunit [Thermincola potens JR]
Length = 422
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 208/422 (49%), Gaps = 27/422 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 80
++R+++ T + V+ RIG IP+PG + I Q + G LG F GA
Sbjct: 12 GDLRKKILFTLAMFVVFRIGAHIPVPGINHTAIEQ----LIKGGGSLLGFFDVISGGAFK 67
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+ S F + I+P I ASI+MQ+L ++P L QL KEG +G +KI YI + ++ ++++
Sbjct: 68 RFSIFAMSITPYINASIIMQLLTVVIPKLEQLSKEGEEGRKKITQYIRYGTVVLGFIQSL 127
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+A ++L + + S M+ A L G + W+ + I+E G G G SLII GI+
Sbjct: 128 GMA-FTLRAAGALENPSFGSYMIIAITLTAGTAFLMWLGEQITEKGIGNGISLIIFAGIV 186
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G LY + + +V +L L+ V +V V V EG R++ +QY A
Sbjct: 187 AGIPGGLYNIYEAVRVGTVNPLSVVL-LVIVAALVIAAVVAVNEGQRRIPVQY-----AK 240
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
+IP +N +G+ P++ + +L FP+ +A+ P K I
Sbjct: 241 RVVGRRVYGGQSTHIPLKVNQAGVIPIIFASSILMFPTTIANFF--PNNAFSKWI----N 294
Query: 321 SVGARPWVYYTI-YAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
SV A V ++I YA + F F I P ++AD + K G IP ++PG+ T EYL
Sbjct: 295 SVFAWGSVSHSIMYALLIIFFTYFYTAITFNPMDVADNMKKYGGFIPGLRPGRPTAEYLD 354
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYN 437
KI G + L+++A I+ + N F G TS+LI+VG +E + +++
Sbjct: 355 KILTRITLSGAVFLALIAILPAIILGATKIPNIYF--GGTSLLIVVGVALETMKQIESHL 412
Query: 438 VM 439
+M
Sbjct: 413 LM 414
>gi|206602695|gb|EDZ39176.1| Preprotein translocase subunit (SecY) [Leptospirillum sp. Group II
'5-way CG']
Length = 437
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 213/433 (49%), Gaps = 29/433 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE+R+R+ T ++ + RIG +IP PG + + Q +L G++ D GA +L
Sbjct: 16 SELRQRILFTIGMLAVYRIGAYIPTPGVNGNALSQ-FLHQNGGALIGFFDMFSGGALSRL 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA--V 140
+ F LGI P I ASI++Q+L + P+L + KEG G + I Y ++++ A++++ +
Sbjct: 75 TIFALGIMPYISASIILQLLTVVHPTLQAMAKEGERGRKIITRYTRYLTVVIALVQSFGI 134
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ + + + L + WI + I+E G G G SLII GI+
Sbjct: 135 ALGLEGMNNGQFVPHPGWSFRFIVVITLTAATTFVMWIGEQITERGVGNGISLIIFSGII 194
Query: 201 TGYTETL---YKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
+ YK+ +Q + + + ++ VF IV+ V + RK+ +QY
Sbjct: 195 ARLPAAIINTYKLYNQ---GEISGFLILALIVMVFLIVSS-IVFIETARRKIPIQY---- 246
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 317
A + + +IPF IN +G+ P + + L++FP+I+A + P+ Q + L+
Sbjct: 247 -AKRLVGNKMMGGQSTHIPFKINTAGVIPPIFASSLISFPAIIAGFVSVPWIQSFGKSLS 305
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEY 375
P + + Y +Y + F F A + P +IA+ + K G IP V+PG+ T+EY
Sbjct: 306 PGS------FSYTGLYVLLIVFFCFFYTAVVLNPTDIAENMQKYGGYIPGVRPGQKTVEY 359
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
L ++ F G L LSI+ +L + +++ F G TS+LI++G ++ + ++
Sbjct: 360 LYRVMNRITFVGALYLSIVCVIPELLIY---QLHVPFYFGGTSLLIVIGVSLDTAQQIES 416
Query: 436 YNVMPSLSKALRR 448
Y + + L++
Sbjct: 417 YMMSRNYEGILKK 429
>gi|357145358|ref|XP_003573616.1| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
[Brachypodium distachyon]
Length = 548
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 204/419 (48%), Gaps = 24/419 (5%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAE 79
FFK + + +V+SRIG ++PL G +R D S + G++D G
Sbjct: 129 DFFKGPLPGKFLKLLGFLVLSRIGVYVPLGGVNREAFAGNLDQNSLL-GTLDSFSG-GGI 186
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILE 138
+L LGI P I A I+ Q+L + P L L +KEG G +KI Y + S+GFAI++
Sbjct: 187 GRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKILQYTRYASVGFAIVQ 246
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A+ + PY S + V+ + LL G++ +++ +TISE G G+SL+I
Sbjct: 247 AIGQVLFLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFLGETISELKLGNGTSLLIFTS 303
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I++ + + +++ G + +L ++ F + + V V E RK+ L Y
Sbjct: 304 IISYLPASFGRTVAE--GFQAGNYVGLLTIILSFFFLVLGIVYVQEAERKIPLNY----- 356
Query: 259 AS--AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
AS ++R P + Y+PF +N SG+ P++ +T LA P+ LA G F + L
Sbjct: 357 ASRYSSRTGGP--QRSAYLPFKVNSSGVMPIIFSTSSLALPATLARFTGLDFLKKAAIAL 414
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
P S V + AFF + + + P ++++ L + GA IP V+PGK+T ++
Sbjct: 415 TPGGSFYLPTNVL--LIAFFNYYYTFLQLD--PDDLSEQLKRQGASIPLVRPGKSTAAFI 470
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
+ + G L++LA ++++ + + TSVLI+VG + R QA
Sbjct: 471 KTVLSRISVLGSGFLAVLAAGPSVVEQ-ISHLTAFRGFAGTSVLILVGCATDTARKVQA 528
>gi|161611306|ref|YP_007429.2| preprotein translocase subunit SecY [Candidatus Protochlamydia
amoebophila UWE25]
Length = 456
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 214/437 (48%), Gaps = 42/437 (9%)
Query: 41 ISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-----ELGDFGAELKLSFFQLGISPQIVA 95
+ R+G FIP+PG + + + GS + ++ GA +++ LG++P I A
Sbjct: 27 VCRLGSFIPVPGINGEVAVSFFRHATGGSQNLFQMVDIFSGGAFSQMTVIALGVTPYISA 86
Query: 96 SILMQVLCHIVPSLVQ-LRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAA 154
SI+MQ+L +VPSL + LR+ G G KI + ++++ + L++ + A Y+L ++
Sbjct: 87 SIIMQLLVALVPSLQRDLRENGDAGKRKINRWTRFLTIVLSFLQSALFAKYALQINLSRP 146
Query: 155 SHSVKHVM-VTAF------------LLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
++ +TAF + G M + W+ + I+E G G G SLIIC+GIL+
Sbjct: 147 GIVAGELLDITAFGLPWLFYLITIATMTTGTMFLMWVGEQITERGIGNGISLIICLGILS 206
Query: 202 GYTETLYKMLSQLLGSSVR----WWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
+ + QL S + +L L+ VF +VT+ ++V +G R++ LQ+
Sbjct: 207 QIPTAMGLIFQQLNLDSQEPGQMNFSTILVLISVFVVVTLATILVIQGHRRIPLQH---- 262
Query: 258 LASAAREDSPITEVE---PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 314
AR EV+ YIP IN +G+ PV+ + LL FP+ L + +G W + E
Sbjct: 263 ----ARRVVGRKEVQGGSSYIPLKINYAGVIPVIFASSLLMFPATLGTFVGRGNW--LGE 316
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKAT 372
+ N + G +Y ++ + F F A P +IA + K GA IP ++ GK T
Sbjct: 317 VANWLSPGGP---LYLVLFVALIIFFTYFWTATQFRPDQIASDMKKNGAFIPGIRQGKPT 373
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINE-GFSIGFTSVLIIVGSIIELRR 431
+YL G + L+++A T++ L + G T++LI+VG +++ +
Sbjct: 374 QDYLESTMNRVTLLGAVFLALIAILPTMIGSVLGVPPTISYFFGGTALLILVGVVLDTMK 433
Query: 432 SYQAYNVMPSLSKALRR 448
+++ +M +++
Sbjct: 434 QVESHLLMKRYDGFMKK 450
>gi|395205568|ref|ZP_10396199.1| preprotein translocase subunit SecY [Propionibacterium humerusii
P08]
gi|422441376|ref|ZP_16518186.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL037PA3]
gi|422472439|ref|ZP_16548927.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL037PA2]
gi|422572128|ref|ZP_16647699.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL044PA1]
gi|313836049|gb|EFS73763.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL037PA2]
gi|314929587|gb|EFS93418.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL044PA1]
gi|314970528|gb|EFT14626.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL037PA3]
gi|328906204|gb|EGG25979.1| preprotein translocase subunit SecY [Propionibacterium humerusii
P08]
Length = 439
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 210/449 (46%), Gaps = 51/449 (11%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ A +F ++RR++ T ++ + R+G IP+P + I SGS L
Sbjct: 1 MLSAFANAFRTPDLRRKILFTLFILAVFRLGSVIPVPNVNVSNINTCVNQASSGSSAGLY 60
Query: 75 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
GA LKL+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SMISLFSGGALLKLAIFALGIMPYITASIILQLLTVVIPKLETLKKEGASGQNKITQYTR 120
Query: 129 WISLGFAILEAVIVACYSLPYSIYAA------SHSVKHVMVTAFLLVCGAMTMSWICDTI 182
+++L +L+A + ++ S SV V+V + G + W+ + +
Sbjct: 121 YLTLVLGLLQATAFVTLATSGRLFTCSLPVVYSTSVFEVVVMILTMTAGTTIVMWMGELV 180
Query: 183 SESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
++ G G G S++I I + ++L+ K+ G + W F+ ++ V + M AV
Sbjct: 181 TDRGIGNGMSIMIFTQIAARFPDSLWAIKVARNGAGQAHAW--FIFSMVIVIGLAVMAAV 238
Query: 241 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V + +G R++ +QY + S YIP +N SG+ PV+ + +L P +
Sbjct: 239 VFIEQGQRRIPVQYAKRMVGRRMFGGS-----TTYIPLKVNQSGVIPVIFASSILYLPVL 293
Query: 300 LASILGSPFWQHVKEILNPETSVGARPWV--YYT-----IYAFFVFLFNIF------DIA 346
A+ P+TS A W+ Y+T +Y FL IF I
Sbjct: 294 YAT-------------FRPQTS--AAKWIGHYFTRGDHPVYNIAYFLLIIFFCYFYVAIT 338
Query: 347 NLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR 406
P E++D + K G IP ++ GK T +YL + + G L L +++ T+ YL+
Sbjct: 339 FDPVEMSDNMKKYGGFIPGIRAGKPTEDYLAYVLSRLTAPGSLYLGLISMIPTLAFVYLK 398
Query: 407 RINEGFSIGFTSVLIIVGSIIELRRSYQA 435
N+ F G TS+LIIVG ++ + ++
Sbjct: 399 A-NQNFPFGGTSILIIVGVALDTVKQVES 426
>gi|269214265|ref|ZP_05986197.2| preprotein translocase, SecY subunit [Neisseria lactamica ATCC
23970]
gi|269210297|gb|EEZ76752.1| preprotein translocase, SecY subunit [Neisseria lactamica ATCC
23970]
Length = 427
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 211/429 (49%), Gaps = 23/429 (5%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
++++RL +V+ RIG IP+PG D + + Y S G + L F G+ + S
Sbjct: 6 DLKKRLVFLLGALVVFRIGAHIPVPGVDAVALAKLYESAGGGILGMLNMFSGGSLERFSI 65
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++ AIL+++ VA
Sbjct: 66 FAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKLITKYTRYGTVLLAILQSLGVAS 125
Query: 145 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 204
+ I S S + + T LV G M + W+ + I+E G G G SLII GI +G
Sbjct: 126 FVFQRGIVVTS-SFEFYVSTVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIASGIP 184
Query: 205 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV--TEGCRKVKLQYYGFKLASAA 262
+ ++++ + ++ ++ LL VF ++ + +VV RK+ + Y A
Sbjct: 185 SGITRLVAFVNQGTMS---ILMALLIVFGVLLLIYLVVYFESAQRKIPIHY-------AK 234
Query: 263 RE-DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETS 321
R+ +S + ++PF +N +G+ P + + ++ FPS L GS + +
Sbjct: 235 RQFNSGLGNHNTHMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSTDTNSILYKIVGLLQ 294
Query: 322 VGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKI 379
G +Y ++A V F F A + PKE+A+ L K GA +P ++PG+ T YL K+
Sbjct: 295 HGQS--LYMVLFAATVIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQTSRYLEKV 352
Query: 380 QASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
+G L ++I+ L L N F +G TS+LI+V ++ +Y +
Sbjct: 353 VLHLTLFGALYITIICLIPEFLTTVL---NVPFYLGGTSLLILVVVTMDFSTQINSYRLT 409
Query: 440 PSLSKALRR 448
K + R
Sbjct: 410 QQYDKLMIR 418
>gi|332637081|ref|ZP_08415944.1| preprotein translocase subunit SecY [Weissella cibaria KACC 11862]
Length = 435
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 217/435 (49%), Gaps = 30/435 (6%)
Query: 12 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 71
L +VLN+ E +IR++LF T ++++ R+G +I +PG + + + S + GS+
Sbjct: 2 LKTVLNSLKEK----DIRKKLFFTLWILIVYRLGAYITVPGINTAALTEVANSGL-GSIL 56
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ G S F +G+SP + A I++Q+L IVP V+ K+G G K+ ++
Sbjct: 57 NMFSGGGLTNYSLFAMGVSPYVTAQIVVQLLQMDIVPRFVEWSKQGEVGRRKLNQVTRYL 116
Query: 131 SLGFAILEAV-IVACYS-LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
++ A ++++ I A ++ L + +++ ++ F+L G M W+ + I+E G G
Sbjct: 117 TIVLAFVQSIGITAGFNQLSQVKLVETPNLETYLLIGFILTAGTMFAVWLGEMITERGLG 176
Query: 189 QGSSLIICVGILTGYTETLYKMLSQ--LLGSS-VRWWPFMLGLLGVFTIVTMWAVVVTEG 245
QG S++I GI+ +Y++ + L G R W F+ G+L +F +V + +
Sbjct: 177 QGVSMLIFAGIIARVPAGVYQLFKEHVLQGDDPARGWAFLAGILLIFILVIAFVTWFNQA 236
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
RK+ +QY + ++ + S Y+P IN +G+ PV+ + LL P +
Sbjct: 237 IRKIPMQYT--RRSTGSGNSS-------YLPLKINVAGVIPVIFASSLLVTPQTILQAFA 287
Query: 306 SPF-----WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
+ F + + + L+ +T G VY + F F + + P+++A+ L K G
Sbjct: 288 TKFADAGWYNTLMQYLSMQTMQGGI--VYTLLIVLFTFFYAFVQVN--PEKVAENLQKQG 343
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
+ I V PG+AT ++L+ + G L L +A + IL ++ ++ + TSVL
Sbjct: 344 SYIVGVWPGRATEKWLSGLLMRLSVVGALFLGFVALAP-ILATHIFGLDSNLGMSGTSVL 402
Query: 421 IIVGSIIELRRSYQA 435
I++G I+L R +
Sbjct: 403 IVIGVAIDLIRQLEG 417
>gi|325663042|ref|ZP_08151492.1| preprotein translocase [Lachnospiraceae bacterium 4_1_37FAA]
gi|331086649|ref|ZP_08335726.1| preprotein translocase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470496|gb|EGC73726.1| preprotein translocase [Lachnospiraceae bacterium 4_1_37FAA]
gi|330409815|gb|EGG89250.1| preprotein translocase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 438
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 220/442 (49%), Gaps = 39/442 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GA 78
++F ++IR+++F T +++V+ RIG +P PG D I + S + + F G+
Sbjct: 7 KAFQVADIRKKIFYTFMMLVVIRIGSQLPTPGVDPTYIQNFFESQTGEAFNFFNAFTGGS 66
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S F L I+P I +SI+MQ+L +P L +++K+G DG +KI + ++++ A++E
Sbjct: 67 FTQMSVFALSITPYITSSIIMQLLTIAIPKLEEMQKDGEDGRKKIAAITRYVTVALALIE 126
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+ +A + + V L G+ + WI + I+E G G G S+++ +
Sbjct: 127 STAMAV-GFGRQGLLVDFNFVNAAVVVVTLTAGSAFLMWIGERINEKGVGNGISIVLLIN 185
Query: 199 ILTGYTETLYKMLSQLL-GSSVRWWPF-MLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
I++ + + +Q + G S+ + +L + +V ++ +++ +G RK+ +QY
Sbjct: 186 IISRVPDDFVTLYNQFMKGKSLASAGLAAVIILAIILVVVVFVIILQDGQRKIAVQY--- 242
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV-KEI 315
+ + + +IP +N +G+ PV+ + L+ FP ++AS LG + + EI
Sbjct: 243 --SQRIQGRRSVGGQSSFIPLKVNTAGVVPVIFASSLMQFPVVIASFLGKGNGKGIGSEI 300
Query: 316 L---------NPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 363
L NPE W +Y + FF + + I P EIA+ + K G I
Sbjct: 301 LKGLSSNNWCNPEQL--KYSWGLILYIVLTVFFAYFYT--SITFNPLEIANNMKKSGGFI 356
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PGK T +YLTKI F G + L I+ + + +L S G TS++IIV
Sbjct: 357 PGIRPGKPTADYLTKILNYIIFIGAVGLIIVQVIPFVFNGWL---GANVSFGGTSLIIIV 413
Query: 424 GSIIE---------LRRSYQAY 436
G ++E L R+Y+ +
Sbjct: 414 GVVLETIKQIESQLLVRNYKGF 435
>gi|312133894|ref|YP_004001233.1| secy [Bifidobacterium longum subsp. longum BBMN68]
gi|311773188|gb|ADQ02676.1| SecY [Bifidobacterium longum subsp. longum BBMN68]
Length = 445
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 203/431 (47%), Gaps = 27/431 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 74
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLF 65
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 135 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYQCDQVIPDGSVFNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 246
GQG S++I + I +G+ L+++ G+ W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGTDGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
VK I N + W Y +YA + F F I P E AD + + G IP
Sbjct: 298 SDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFFYTSITFNPDETADNMKQYGGFIP 355
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++ G AT YLT + G + L +A T+L L +N G T++LII G
Sbjct: 356 GIRAGNATSRYLTYVMNRLNTVGAVYLLFVALIPTVLIMAL-DLNAKLPFGGTTILIIAG 414
Query: 425 SIIELRRSYQA 435
++ R +A
Sbjct: 415 VGLDTLRQAKA 425
>gi|410622869|ref|ZP_11333690.1| preprotein translocase subunit SecY [Glaciecola pallidula DSM 14239
= ACAM 615]
gi|410157544|dbj|GAC29064.1| preprotein translocase subunit SecY [Glaciecola pallidula DSM 14239
= ACAM 615]
Length = 436
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 201/433 (46%), Gaps = 26/433 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
SE++ RL I++ R+G ++P+PG D ++ Q + V+ + F GA + S
Sbjct: 15 SELKARLLFVLGAIIVFRLGSYVPIPGIDGNVLAQLFEQQKGTIVEMMNMFSGGALERAS 74
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
LGI P I ASI++Q+L H+ P L++L+KEG G KI Y +++L AI ++V +A
Sbjct: 75 VLALGIMPYITASIIVQLLSHMYPPLMELKKEGEAGKRKISQYTRYLTLMLAIFQSVGIA 134
Query: 144 CYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
LP + + + LV G M + W+ + I+E G G G S++I GI+
Sbjct: 135 T-GLPNLVQGLVVNPGIGFYFTAIVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVA 193
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 261
G + + Q + F+L + + +T V V R++ + Y A
Sbjct: 194 GLPTAIGQTAEQARLGEINLL-FLLVIGAIIVALTYLVVFVERAQRRIVVNY-----AKR 247
Query: 262 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEILN 317
+ ++P +N +G+ P + + ++ FP LA ++G F V L+
Sbjct: 248 QQGRKVFAAQSSHLPLKVNMAGVIPPIFASSIILFPGTLAGMVGQNETFSFLTDVSLALS 307
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEY 375
P +P +Y +YA + F F A + P+E AD L K GA +P ++PG+ T Y
Sbjct: 308 P-----GQP-LYVMLYAATIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTSRY 361
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
+ K+ G L ++ + + + L N F G TS+LII +++ Q
Sbjct: 362 IDKVMTRLTLAGALYITFVC---LVPEFLLLWFNVPFYFGGTSLLIICVVVMDFMAQVQT 418
Query: 436 YNVMPSLSKALRR 448
+ + L++
Sbjct: 419 HLMSHQYGDVLKK 431
>gi|110598107|ref|ZP_01386385.1| SecY protein [Chlorobium ferrooxidans DSM 13031]
gi|110340239|gb|EAT58736.1| SecY protein [Chlorobium ferrooxidans DSM 13031]
Length = 443
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 205/431 (47%), Gaps = 38/431 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
E+R+R+ T +L+ + R+G I +PG D I S + D G F GA +
Sbjct: 15 ELRQRILYTLLLLFVYRLGSHITIPGVDASAIANASTSHAN---DLFGLFDLFVGGAFQR 71
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-- 139
S F LGI P I ASI++Q+L + P +L+KEG DG +KI + ++ A L++
Sbjct: 72 ASIFSLGIMPYISASIIVQLLGAVTPYFQKLQKEGEDGRQKISQMTRYGTVLIAALQSWA 131
Query: 140 --VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
V + S I + + LL + + W+ + I+E G G G SLII +
Sbjct: 132 LSVSFSSPSSFGKIVVPEPGIFFTVTAVILLTSATVFVMWLGEKITERGIGNGISLIIMI 191
Query: 198 GILTGYTETLYKMLSQL-LGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY--- 253
GIL+ + ++L L + LGS + W + +L + + + VV+T G R++ +Q+
Sbjct: 192 GILSRFPQSLVAELRSVSLGS--KNWIIEVIILAMMAAIVAFVVVLTVGTRRIPVQHAKR 249
Query: 254 -YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
G K+ + + YIP IN +G+ P++ ++ P S F+
Sbjct: 250 VVGRKVYGGSTQ---------YIPMRINTAGVMPIIFAQSIMFLPGTFIS-----FFPDS 295
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGK 370
+ + T W Y ++ + F F IA PKE+AD + + G IP V+PGK
Sbjct: 296 EVMQKIATVFAYDSWWYALMFGTMIVFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGK 355
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--IGFTSVLIIVGSIIE 428
T +++ I G + L+I+A T L + + GF+ G TS+LIIVG ++
Sbjct: 356 GTADFIDNILTRITLPGAISLAIIAILPTFLTKF-GNVTPGFAQFFGGTSLLIIVGVGLD 414
Query: 429 LRRSYQAYNVM 439
+ +++ +M
Sbjct: 415 TLQQVESHLLM 425
>gi|441148620|ref|ZP_20964961.1| preprotein translocase subunit SecY [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440619830|gb|ELQ82870.1| preprotein translocase subunit SecY [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 437
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 212/437 (48%), Gaps = 28/437 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-LSFVSGSVDEL 73
+L A +F ++R++L T ++++ R+G +P+PG + + + +G + L
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIVLVYRLGAHVPVPGVNYSNVETCMKQAGANGGLFGL 60
Query: 74 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGQAKITQYTRYL 120
Query: 131 SLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDT 181
++ A+L+ + + +++ S S+ + + G + W+ +
Sbjct: 121 TVALAVLQGTGLVATAKSGTLFQGCQLASQIVPSDSIFTTITMVITMTAGTAVVMWLGEL 180
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
+++ G G G S+++ VGI G+ +L+++ +L G W ++ V + V
Sbjct: 181 VTDRGIGNGMSILMFVGIAAGFPGSLWQI--KLSGKLADGWIEFFSVIVVGLAMVALVVF 238
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++A
Sbjct: 239 VEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALVA 293
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNK 358
GS V + + G P VY Y + F F +A N P+E+AD + K
Sbjct: 294 QFSGSKAGWAVW--IETNFTKGNHP-VYIVTYFLLIVFFAFFYVAISFN-PEEVADNMKK 349
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
G IP ++ G+ T EYL+ + + G L L ++A T+ L + N+ F G TS
Sbjct: 350 YGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTV-ALVLFKANQNFPFGGTS 408
Query: 419 VLIIVGSIIELRRSYQA 435
+LIIVG +E + ++
Sbjct: 409 ILIIVGVGLETVKQIES 425
>gi|345862671|ref|ZP_08814885.1| preprotein translocase subunit SecY [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345126013|gb|EGW55879.1| preprotein translocase subunit SecY [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 440
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 199/424 (46%), Gaps = 29/424 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+E+R+RL A +++ RIG FIP+PG + + + +D F GA + S
Sbjct: 12 TELRQRLLFVAGALLVFRIGTFIPVPGVNPVALAALFEQAQGSILDMFNMFSGGALERAS 71
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI+MQ++ ++P L QL+KEG G KI Y + ++ A +AV ++
Sbjct: 72 LFALGIMPYISASIIMQLMTSVLPKLEQLKKEGEAGRRKITQYTRYGTVVLASFQAVGIS 131
Query: 144 CYSLPYSI----YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
SI A V V+ A LV G M + W+ + I+E G G G S+II GI
Sbjct: 132 IALQSQSIGGQSVVAQQGVGFVVTAAVSLVTGTMFLMWLGEQITERGIGNGISMIIFAGI 191
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 259
+ G + L + ++ L + VT + V V G R++ + Y A
Sbjct: 192 VAGLPSAIGGTLELARTGELNVLTILV-LFALAIAVTGFVVFVERGQRRITVNY-----A 245
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQHVKEI 315
+ + ++P +N +G+ P + + ++ FP+ L G+ + Q +
Sbjct: 246 KRQQGRRLMQAQSSHLPLKLNMAGVIPPIFASSIILFPATLGQWFGNSEETRWLQDIFSK 305
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
L+P P VY YA + F F A + KE AD L + GA IP ++PG+ T
Sbjct: 306 LSP-----GEP-VYVMAYAAAIIFFCFFYTALVFNSKETADNLKRSGAFIPGIRPGEQTA 359
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVGSIIELRRS 432
+Y+ + + F G +I T+ +L +L N F G TS+LIIV +++
Sbjct: 360 KYIDGVMSRLTFAG----AIYITAVCLLPEFLIVGWNVPFYFGGTSLLIIVVVVMDFMAQ 415
Query: 433 YQAY 436
QA+
Sbjct: 416 IQAH 419
>gi|348028115|ref|YP_004870801.1| preprotein translocase subunit SecY [Glaciecola nitratireducens
FR1064]
gi|347945458|gb|AEP28808.1| preprotein translocase subunit SecY [Glaciecola nitratireducens
FR1064]
Length = 436
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 201/433 (46%), Gaps = 26/433 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
SE++ RL I++ R+G ++P+PG D ++ Q + V+ + F GA + S
Sbjct: 15 SELKSRLLFVLGAIIVFRLGSYVPIPGIDGNVLAQLFEQQKGTIVEMMNMFSGGALERAS 74
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
LGI P I ASI++Q+L H+ P L++L+KEG G KI Y +++L AI ++V +A
Sbjct: 75 VLALGIMPYITASIIVQLLSHMYPPLMELKKEGEAGKRKISQYTRYLTLLLAIFQSVGIA 134
Query: 144 CYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
LP + + + LV G M + W+ + I+E G G G S++I GI+
Sbjct: 135 T-GLPNLVQGLVVNPGIGFYFTAIVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVA 193
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 261
G + + Q + F+L + + +T V V R++ + Y A
Sbjct: 194 GLPTAIGQTAEQARLGEINLL-FLLVIGAIIVALTYLVVFVERAQRRIVVNY-----AKR 247
Query: 262 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEILN 317
+ ++P +N +G+ P + + ++ FP LA ++G F V L+
Sbjct: 248 QQGRKVFAAQSSHLPLKVNMAGVIPPIFASSIILFPGTLAGMVGQNETFSFLTDVSLALS 307
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEY 375
P +P +Y +YA + F F A + P+E AD L K GA +P ++PG+ T Y
Sbjct: 308 P-----GQP-LYVMLYAATIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTSRY 361
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
+ K+ G L ++ + + + L N F G TS+LII +++ Q
Sbjct: 362 IDKVMTRLTLAGALYITFVC---LVPEFLLLWFNVPFYFGGTSLLIICVVVMDFMAQVQT 418
Query: 436 YNVMPSLSKALRR 448
+ + L++
Sbjct: 419 HLMSHQYGDVLKK 431
>gi|111023116|ref|YP_706088.1| preprotein translocase subunit SecY [Rhodococcus jostii RHA1]
gi|226365615|ref|YP_002783398.1| preprotein translocase subunit SecY [Rhodococcus opacus B4]
gi|384106898|ref|ZP_10007802.1| preprotein translocase subunit SecY [Rhodococcus imtechensis
RKJ300]
gi|397736536|ref|ZP_10503218.1| preprotein translocase subunit secY [Rhodococcus sp. JVH1]
gi|419961195|ref|ZP_14477204.1| preprotein translocase subunit SecY [Rhodococcus opacus M213]
gi|424851604|ref|ZP_18276001.1| preprotein translocase, SecY subunit [Rhodococcus opacus PD630]
gi|432336131|ref|ZP_19587661.1| preprotein translocase subunit SecY [Rhodococcus wratislaviensis
IFP 2016]
gi|110822646|gb|ABG97930.1| preprotein translocase [Rhodococcus jostii RHA1]
gi|226244105|dbj|BAH54453.1| preprotein translocase SecY subunit [Rhodococcus opacus B4]
gi|356666269|gb|EHI46340.1| preprotein translocase, SecY subunit [Rhodococcus opacus PD630]
gi|383833349|gb|EID72812.1| preprotein translocase subunit SecY [Rhodococcus imtechensis
RKJ300]
gi|396927726|gb|EJI94953.1| preprotein translocase subunit secY [Rhodococcus sp. JVH1]
gi|414573516|gb|EKT84200.1| preprotein translocase subunit SecY [Rhodococcus opacus M213]
gi|430776899|gb|ELB92292.1| preprotein translocase subunit SecY [Rhodococcus wratislaviensis
IFP 2016]
Length = 437
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 212/443 (47%), Gaps = 53/443 (11%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSG--SVDELGDFGAEL 80
++RR++ + L+ + RIG IP PG D R + Q +G S+ L GA L
Sbjct: 13 DLRRKILIALGLVALYRIGAVIPSPGVDYGNVRACVDQLSGGDSAGIYSLINLFSGGALL 72
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+ AIL+A
Sbjct: 73 QLSIFAIGIMPYITASIIVQLLTVVIPKFEELRKEGQSGQAKMTQYTRYLSIALAILQAT 132
Query: 141 -IVACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
IVA S + A S+ +++ ++ GA + W + I+E G G G SL
Sbjct: 133 GIVALASRGQLLQGCQEEIIADKSIFGLVIIVLVMTAGAALVMWFGEVITERGVGNGMSL 192
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQ 252
+I GI + +L G + ++ V + + VV V +G R++ +Q
Sbjct: 193 LIFSGIASRLPSEGKAILDSRGG-------LIFAIICVAALAIIAGVVFVEQGQRRIPVQ 245
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS------ 306
Y + S Y+P +N +G+ PV+ + LL P+++A + G+
Sbjct: 246 YAKRMVGRKMYGGS-----STYLPLKVNQAGIIPVIFASSLLYLPNLIAQLTGATSSADP 300
Query: 307 PFWQHV--KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIP 364
+WQ + + ++NP V +Y+ + FFVF + I P+E AD + K G IP
Sbjct: 301 SWWQRIINEYLVNPNNPV--YIVIYFALIVFFVFFY--VAITFNPEERADEMKKFGGFIP 356
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--IGFTSVLII 422
++PG+ T +YL + G + L ++A +L H+ ++ S G +VLI+
Sbjct: 357 GIRPGRPTADYLNYVLNRITVPGSIYLGLIA----VLPHFFLSGSQTSSSIFGGAAVLIL 412
Query: 423 VGSIIE---------LRRSYQAY 436
V ++ ++R+Y+ +
Sbjct: 413 VSVALDTVKQIESQLMQRNYEGF 435
>gi|283457569|ref|YP_003362152.1| preprotein translocase subunit SecY [Rothia mucilaginosa DY-18]
gi|283133567|dbj|BAI64332.1| preprotein translocase subunit SecY [Rothia mucilaginosa DY-18]
Length = 435
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 196/428 (45%), Gaps = 34/428 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV-SGSVDELGDF---GAELK 81
+++RR+L T +IV+ R+G FIP PG + Q + V SG V ++ + GA L+
Sbjct: 12 ADLRRKLLFTLAMIVLYRVGTFIPAPGVSYGNVQQCLNANVTSGGVYDIVNLFSGGALLQ 71
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
LS F LG+ P I ASI++Q+L ++P +L EG G K+ Y ++++ A+L A
Sbjct: 72 LSIFALGVMPYITASIIIQLLRVVIPRFQELHDEGAQGQAKLTQYTRYLTIALALLNATT 131
Query: 142 VACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+ + + V H+++ L G + W+ + I+E G G G SL+I
Sbjct: 132 IVSMARSGVLLGNCPGIIPQDDVLHILLIIVTLCAGTTVIMWMGEQITERGVGNGMSLLI 191
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
I + + L + W + G+ +V + V V + R++ +QY
Sbjct: 192 FTSIASSFPSALGSI------QRTHGWGIFAAVCGIGLLVMLAVVYVEQSVRRIPVQY-- 243
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI----LGS--PFW 309
A I YIP +N +G+ P++ + LL P ++A GS P W
Sbjct: 244 ---AKRMIGRRTIGGTSTYIPLKVNMAGVIPLIFASSLLTLPGLIAQFNTPTDGSTPPDW 300
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVK 367
+ +N G P +Y +Y F + F F +A P E+AD + K G IP ++
Sbjct: 301 VN---WINAYLVRGDHP-LYIALYFFMIIGFAYFYVAVTFDPVEVADNMKKYGGFIPGIR 356
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
GK T YL+ + G L L +++ ++ L N+ F G S+LI+VG +
Sbjct: 357 AGKPTARYLSYVLNRITLPGALYLGVISMIP-LVALILFNANQNFPFGGASLLIVVGVGL 415
Query: 428 ELRRSYQA 435
+ + A
Sbjct: 416 DTLKQINA 423
>gi|182436607|ref|YP_001824326.1| preprotein translocase subunit SecY [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326777229|ref|ZP_08236494.1| preprotein translocase, SecY subunit [Streptomyces griseus
XylebKG-1]
gi|178465123|dbj|BAG19643.1| putative preprotein translocase SecY [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326657562|gb|EGE42408.1| preprotein translocase, SecY subunit [Streptomyces griseus
XylebKG-1]
Length = 437
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 203/436 (46%), Gaps = 36/436 (8%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
A +F ++R++L T +IVI R+G IP PG D + Q SG + L
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVIYRLGAHIPAPGVDYSKVQQCIDQADSGGLLGLMQMFSG 65
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ AI
Sbjct: 66 GALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALAI 125
Query: 137 LEAVIVACYSLPYSIY---------AASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
L+ + + +++ A S+ ++ + G + W+ + I++ G
Sbjct: 126 LQGTGLVATARSGALFQNCSVGSQIVADKSIFTTIIMVLTMTAGTAAVMWLGELITDRGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKML-SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G S+++ + I + L+ + S L W F +L F +V + V V +
Sbjct: 186 GNGMSILMFISIAATFPGALWAIKESGKLADG--WIEFGTVILIGFVMVAL-VVFVEQAQ 242
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA----S 302
R++ +QY + + + YIP +N +G+ PV+ + LL P+++ S
Sbjct: 243 RRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIVQFSNS 297
Query: 303 ILGSPFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKM 359
G W + G P+ Y+ + FF F + I+ P E+AD + K
Sbjct: 298 QAGWATW------IQDNFVTGDHPYYIATYFVLIVFFAFFY--VAISFNPDEVADNMKKY 349
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G TS+
Sbjct: 350 GGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGGANQNFPFGGTSI 409
Query: 420 LIIVGSIIELRRSYQA 435
LIIVG +E + ++
Sbjct: 410 LIIVGVGLETVKQIES 425
>gi|416058065|ref|ZP_11580409.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|348000074|gb|EGY40873.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
Length = 441
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 208/434 (47%), Gaps = 28/434 (6%)
Query: 26 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGII 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + + Q + +L + + +VT + V V G R++K++Y A
Sbjct: 195 AGLPAAIGQTIEQARLGQMHLLVLLL-IAVIVLVVTYFVVFVERGQRRIKVEY-----AK 248
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 316
+ + ++P +N +G+ P + + ++ FP+ L +G + + +L
Sbjct: 249 RQQGKQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLL 308
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
+P +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 309 HP-----GQP-LYLVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSR 362
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ KI GGL ++ + I+ N F G TS+LI+V I++ Q
Sbjct: 363 YIDKIMTRLTLIGGLYVTFVCLVPYIMTAAW---NVQFYFGGTSLLIVVVVIMDFIVQIQ 419
Query: 435 AYNVMPSLSKALRR 448
++ + AL++
Sbjct: 420 SHLMSTRYESALKK 433
>gi|387120535|ref|YP_006286418.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|415765296|ref|ZP_11482681.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416048090|ref|ZP_11576212.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|416069574|ref|ZP_11583308.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|429735165|ref|ZP_19269140.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans Y4]
gi|347993458|gb|EGY34815.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|347999945|gb|EGY40753.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348653955|gb|EGY69616.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|385875027|gb|AFI86586.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|429149980|gb|EKX92936.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans Y4]
Length = 441
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 207/434 (47%), Gaps = 28/434 (6%)
Query: 26 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGII 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + + Q + +L + + VT + V V G R++K++Y A
Sbjct: 195 AGLPAAIGQTIEQARLGQMHLLVLLL-IAVIVLAVTYFVVFVERGQRRIKVEY-----AK 248
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 316
+ + ++P +N +G+ P + + ++ FP+ L +G + + +L
Sbjct: 249 RQQGKQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLL 308
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
+P +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 309 HP-----GQP-LYLVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSR 362
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ KI GGL ++ + I+ N F G TS+LI+V I++ Q
Sbjct: 363 YIDKIMTRLTLIGGLYVTFVCLVPYIMTAAW---NVQFYFGGTSLLIVVVVIMDFIVQIQ 419
Query: 435 AYNVMPSLSKALRR 448
++ + AL++
Sbjct: 420 SHLMSTRYESALKK 433
>gi|15835411|ref|NP_297170.1| preprotein translocase subunit SecY [Chlamydia muridarum Nigg]
gi|270285591|ref|ZP_06194985.1| preprotein translocase subunit SecY [Chlamydia muridarum Nigg]
gi|270289601|ref|ZP_06195903.1| preprotein translocase subunit SecY [Chlamydia muridarum Weiss]
gi|301336987|ref|ZP_07225189.1| preprotein translocase subunit SecY [Chlamydia muridarum MopnTet14]
gi|14195221|sp|Q9PJN1.1|SECY_CHLMU RecName: Full=Protein translocase subunit SecY
gi|7190825|gb|AAF39600.1| preprotein translocase SecY subunit [Chlamydia muridarum Nigg]
Length = 457
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 218/447 (48%), Gaps = 45/447 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 76
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMREAPDQGKRKLGRMTRLFTLLL 125
Query: 135 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A ++L P + A S+K + T ++ G + + WI +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGIPCVFYLTTVVVMTTGTLLLMWIGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF----MLGLLGVFTIVTM 237
IS+ G G G SLII +G+L + L + ++L S F +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGMLASFPSVLGSIFNKLNLGSQDPSEFGIVSLLVLCAVFVFVLM 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVLTTTYLL 294
V++ EG RKV +Q+ AR EV Y+P +N +G+ PV+ + LL
Sbjct: 246 ATVLIIEGVRKVPVQH--------ARRIIGRREVLGGGSYLPLKVNYAGVIPVIFASSLL 297
Query: 295 AFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PK 350
FP+ + L S + + + +L+P + VY Y + F F A P+
Sbjct: 298 MFPATIGQFLSSESSWLKRIATMLSPGSV------VYSIFYVLLIIFFTYFWTATQFRPE 351
Query: 351 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RIN 409
+IA + K GA IP ++ GK T YL G + L+++A +IL LR N
Sbjct: 352 QIASEMKKNGAFIPGIRQGKPTQSYLEYTMNRVTLLGAVFLAVVAILPSILGRILRVDAN 411
Query: 410 EGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ +G T++LI+VG +++ + A+
Sbjct: 412 VSYFLGGTAMLIVVGVVLDTMKQIDAF 438
>gi|119383532|ref|YP_914588.1| preprotein translocase subunit SecY [Paracoccus denitrificans
PD1222]
gi|119373299|gb|ABL68892.1| protein translocase subunit secY/sec61 alpha [Paracoccus
denitrificans PD1222]
Length = 457
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 200/420 (47%), Gaps = 26/420 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGDFGAELK 81
+E+R+R++ T L++I R+G +IP+PG D R + Q G + + GA +
Sbjct: 21 TELRQRIWFTLGLLIIYRLGTYIPVPGIDGAALRNFMDQAQAGI--GGILSMFTGGALGR 78
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+ F LGI P I ASI++Q+L +VP+L Q++KEG G +KI Y + ++ A+ +A
Sbjct: 79 MGVFALGIMPYISASIIVQLLASMVPALEQMKKEGEQGRKKINQYTRYGTVALALFQAWG 138
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
+A SL + A + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 139 LAV-SLEHGNLAHEPGMFFRASVVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVA 197
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 261
L + L+Q +V P +LG++ + V + V + RK+ +QY ++
Sbjct: 198 EIPGHLAQFLAQGRSGAVS-TPVILGVMIMVAAVIAFVVFMERALRKIHIQYPRRQVGMK 256
Query: 262 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---PFWQHVKEILNP 318
+ ++P +NP+G+ P + + LL P +++ G+ P V P
Sbjct: 257 VYDGQ-----SSHLPIKVNPAGVIPAIFASSLLLLPVTISTFSGNQTGPIMSTVLAYFGP 311
Query: 319 ETSVGARPWVYYTIYAFFVFL--FNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
+P A VF F ++++ +++A+ L G IP ++PGK T +YL
Sbjct: 312 -----GQPLYLLFFAAMIVFFTYFYTYNVSFKTEDVAENLKNQGGFIPGIRPGKRTEDYL 366
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
T + G L+ + I+ L F G TSVLI+V +++ Q++
Sbjct: 367 TYVVTRVLVIGSAYLAFVCLLPEIIRDQL---AIPFYFGGTSVLIVVSVVMDTINQVQSH 423
>gi|11465439|ref|NP_045170.1| preprotein translocase subunit SecY [Cyanidium caldarium]
gi|14195685|sp|P46249.2|SECY_CYACA RecName: Full=Protein translocase subunit SecY
gi|6466342|gb|AAF12924.1|AF022186_46 unknown [Cyanidium caldarium]
Length = 410
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 208/417 (49%), Gaps = 26/417 (6%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSF 84
++ +R RLF T I + R+G F+P+PG D++L DY + ++ + D KLS
Sbjct: 4 ENNLRLRLFQTMKFIALERLGLFVPIPGIDQKLFSSDYSNNAISNLLNVFDNNQAPKLSV 63
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLR-KEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I A+I +Q+L P+L +L+ +EG G +K+ ++S FA +E++ +
Sbjct: 64 FALGIIPYINATITIQILSSAFPALKKLQSEEGEIGKKKLNKITKYLSFCFAFIESLAIV 123
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
L YA ++ ++ T +L+ GAM + W+ D IS G G G+S+II V I + +
Sbjct: 124 ---LRLQKYAFDWNLYFIVQTTLILISGAMLVMWLADNISYKGIGTGASVIIFVNIASAF 180
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
+ L L+QL S+++ F L VF+I + V V E RKV + +++
Sbjct: 181 AKFL---LNQLFVHSIKFLDFASYFALIVFSIACI--VFVQEAIRKVPI------ISAKQ 229
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSV 322
+ + + ++P IN G+ P++ + LLA + G Q V I +
Sbjct: 230 LDSTSFYSNDYFLPLRINQGGVMPIILASSLLALVDYVIR-YGLSTLQAVYFI----NDI 284
Query: 323 GARPWVYYTIYAFFVFLFNIFDIANLPK--EIADYLNKMGARIPNVKPGKATIEYLTKIQ 380
++ +Y+ F+ FN + + E+++ L K IP+++PGK T ++
Sbjct: 285 LPFKILFLLLYSAFIIFFNYLYCSLVLNCFELSNNLKKASVVIPSIRPGKMTEKFFKDTL 344
Query: 381 ASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ +G L+ + + L+ R+ +G ++ +S+LI+VG I+L + + Y
Sbjct: 345 DNLTLFGSGFLAFIVLAPNFLEFVFHIRVFKGLAV--SSLLIVVGVAIDLIKQSKTY 399
>gi|359773719|ref|ZP_09277111.1| preprotein translocase SecY subunit [Gordonia effusa NBRC 100432]
gi|359309164|dbj|GAB19889.1| preprotein translocase SecY subunit [Gordonia effusa NBRC 100432]
Length = 444
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 203/434 (46%), Gaps = 53/434 (12%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF----- 76
+F ++R+++ ++V+ R+G +P PG D R++ GS ++
Sbjct: 8 AFRTPDLRKKILFVIGILVLYRLGATLPSPGVDYRVVDACLAEASKGSSADIYSLINMFS 67
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F +GI P I ASI++Q+L ++P QLRKEG G K+ Y ++++G A
Sbjct: 68 GGALLQLSVFAIGIMPYITASIIVQLLTVVIPRFEQLRKEGQSGQAKMTQYTRYLTVGLA 127
Query: 136 ILEAV-IVACYSL-------------PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 181
IL+A IVA + P I + HS+ + + ++V GA + W +
Sbjct: 128 ILQATGIVALAAQGQLLRGGEGENCNPTEI-VSDHSITSLAIIVVVMVAGACLVMWFGEL 186
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
I+E G G G SL+I GI + +L ++R F+L L+ I+ V
Sbjct: 187 ITERGIGNGMSLLIFAGIAARLPAEGHTILQS---GTLR---FVLVLVAALVILA-GVVF 239
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
+ +G R++ +QY + S Y+P +N +G+ PV+ + LL P ++
Sbjct: 240 IEQGQRRIPVQYAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPQLIL 294
Query: 302 SILGSPF------WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIA 353
+ + WQ K I N T G WVY +Y + F F +A P+E A
Sbjct: 295 QLTSNSSDGEQSGWQ--KFISNYLTDPGN--WVYIVVYFAMIIFFTYFYVAVTFNPEERA 350
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEG-- 411
D + K G IP ++PG+ T +YL + + G + L I+A +L + I G
Sbjct: 351 DDMKKYGGFIPGIRPGQPTADYLGYVLSRITLPGSIYLGIIA----VLPNLFLEIGSGNV 406
Query: 412 --FSIGFTSVLIIV 423
G T+VLI+V
Sbjct: 407 QNMPFGGTAVLIMV 420
>gi|240017525|ref|ZP_04724065.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae FA6140]
Length = 416
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 204/423 (48%), Gaps = 22/423 (5%)
Query: 32 LFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQLGI 89
+F+ LIV RIG IP+PG D + + Y S +G + L F G+ + S F +GI
Sbjct: 1 MFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMFSGGSLERFSIFAIGI 59
Query: 90 SPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPY 149
P I ASI++Q+ I+PSL L+KEG G + I Y + ++ AIL+++ VA +
Sbjct: 60 MPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQ 119
Query: 150 SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYK 209
I S HV T LV G M + W+ + I+E G G G SLII GI +G + K
Sbjct: 120 GIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAK 178
Query: 210 MLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAAREDSPI 268
+++ S+ +L + G ++ + VV E RK+ + Y + A S
Sbjct: 179 LVTLTNQGSMSMLTALLIVFGALLLI--YLVVYFESAQRKIPIHYAKRQFNGRAGSQS-- 234
Query: 269 TEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWV 328
++PF +N +G+ P + + ++ FPS L GS V + G +
Sbjct: 235 ----THMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSADTNSVLHKIAGLLQHGQ--LL 288
Query: 329 YYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFW 386
Y ++A V F F A + PKE+A+ L K GA +P ++PG+ T YL K+ +
Sbjct: 289 YMALFAATVIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLF 348
Query: 387 GGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKA 445
G L + T+ ++ +L + N F +G TS+LI+V ++ +Y + K
Sbjct: 349 GALYI----TTICLIPEFLTTVLNVPFYLGGTSLLILVVVTMDFSTQINSYRLTQQYDKL 404
Query: 446 LRR 448
+ R
Sbjct: 405 MTR 407
>gi|302536271|ref|ZP_07288613.1| preprotein translocase, SecY subunit [Streptomyces sp. C]
gi|302445166|gb|EFL16982.1| preprotein translocase, SecY subunit [Streptomyces sp. C]
Length = 437
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 209/447 (46%), Gaps = 48/447 (10%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T +IV+ R+G IP+PG + V VD++G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVLYRLGSHIPVPGVSYK--------NVQICVDQMG 52
Query: 75 DF------------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEK 122
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G K
Sbjct: 53 SSNSLFGLVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPKLENLKKEGQSGTAK 112
Query: 123 IKSYIWWISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAM 173
I Y ++++ AIL+ + + +++ +HS+ + + G
Sbjct: 113 ITQYTRYLTVALAILQGTGLVATARTGALFGTCPVAREIVPNHSIFTTITMVLTMTAGTC 172
Query: 174 TMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW-PFMLGLLGVF 232
+ W+ + I++ G G G S+++ + I G+ L+ + +L G W F + +L
Sbjct: 173 VVMWLGELITDRGIGNGMSILMFISIAAGFVGALWTI--KLQGKIADGWVEFAVVILVGL 230
Query: 233 TIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTY 292
+V + V V + R++ +QY + A + YIP +N +G+ PV+ +
Sbjct: 231 AMVAL-VVFVEQAQRRIPVQYAKRMIGRRAYGGT-----STYIPLKVNQAGVIPVIFASS 284
Query: 293 LLAFPSILASILGSPF-WQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANL 348
LL P+++ GS W + G P+ Y+ + FF F + I+
Sbjct: 285 LLYIPALIVQFSGSTAGW---ATWIQKHFVKGDHPYYIAAYFLLIVFFAFFY--VAISFN 339
Query: 349 PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI 408
P+E+AD + K G IP ++ G+ T EYL+ + + G L L ++A T+
Sbjct: 340 PEEVADNMKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGA- 398
Query: 409 NEGFSIGFTSVLIIVGSIIELRRSYQA 435
N+ F G TS+LIIVG +E + ++
Sbjct: 399 NQNFPFGGTSILIIVGVGLETVKQIES 425
>gi|406977622|gb|EKD99743.1| preprotein translocase subunit SecY [uncultured bacterium]
Length = 418
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 204/425 (48%), Gaps = 30/425 (7%)
Query: 21 ESFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAE 79
+ FKS E+R+++F + ++IVI R+ IP+PG D I Q S + +L G
Sbjct: 2 SNIFKSPELRKKIFFSLLVIVIFRVLTHIPVPGVDTTAIKQFLTSNAVFGLFDLFSGGGF 61
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
S L ++P I ASI++Q+ ++PSL +L KEG G EKI Y +++ ++L+A
Sbjct: 62 SNFSIVTLSLNPYINASIILQLFTMMIPSLEELSKEGESGREKINMYTKLLTVPLSLLQA 121
Query: 140 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
V + L + ++V L G M + WI D ++E G G G S++I +GI
Sbjct: 122 YGV-YFLLSKQGVINGLDITRLIVLICTLTAGTMLLMWIGDLLTEYGVGNGISVLIFIGI 180
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 259
++ + + S + + + L L + +V V+V EG R + ++Y
Sbjct: 181 ISRLPASAVQFFSTIQSNGIFNA---LVFLAITALVIAGVVLVNEGTRNIPIEY------ 231
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP- 318
R +V Y+P IN +G+ P++ ++ PS+L+ F Q L
Sbjct: 232 --GRTGVKSNKVTNYLPIKINQAGVIPIIFAVSVVMIPSLLS----GSFVQSSNGTLQAI 285
Query: 319 ----ETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ + Y +Y VF F F I+ P++I++ + K G IP ++PG +T
Sbjct: 286 GQFLAVNFKSTALGYNIVYFLLVFSFTYFYTSISFNPEKISEDVKKRGGFIPGIRPGIST 345
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSVLIIVGSIIELR 430
+YL+ + GGL L ++A I+ + ++ + F++G T +LI+V ++E
Sbjct: 346 TKYLSGVIKKITLAGGLFLGLIA----IMPYLVQTLGGVSNFAVGGTGLLIVVSVVLETI 401
Query: 431 RSYQA 435
R Q+
Sbjct: 402 RQIQS 406
>gi|23466150|ref|NP_696753.1| preprotein translocase subunit SecY [Bifidobacterium longum
NCC2705]
gi|227546496|ref|ZP_03976545.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
longum ATCC 55813]
gi|239621030|ref|ZP_04664061.1| preprotein translocase SecY subunit [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|322689909|ref|YP_004209643.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
infantis 157F]
gi|384200782|ref|YP_005586529.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
longum KACC 91563]
gi|23326887|gb|AAN25389.1| preprotein translocase SecY subunit [Bifidobacterium longum
NCC2705]
gi|227213045|gb|EEI80924.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|239516131|gb|EEQ55998.1| preprotein translocase SecY subunit [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|320461245|dbj|BAJ71865.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
infantis 157F]
gi|338753789|gb|AEI96778.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
longum KACC 91563]
Length = 445
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 203/431 (47%), Gaps = 27/431 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 74
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLF 65
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 135 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYQCDQVIPDGSVFNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 246
GQG S++I + I +G+ L+++ G+ W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGTDGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
VK I N + W Y +YA + F F I P E AD + + G IP
Sbjct: 298 SDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFFYTSITFNPDETADNMKQYGGFIP 355
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++ G AT YLT + G + L +A T+L L +N G T++LII G
Sbjct: 356 GIRAGNATSRYLTYVMNRLNTVGAVYLLFVALIPTVLIMAL-GLNAKLPFGGTTILIIAG 414
Query: 425 SIIELRRSYQA 435
++ R +A
Sbjct: 415 VGLDTLRQAKA 425
>gi|189440589|ref|YP_001955670.1| preprotein translocase subunit SecY [Bifidobacterium longum DJO10A]
gi|317483430|ref|ZP_07942420.1| eubacterial secY protein [Bifidobacterium sp. 12_1_47BFAA]
gi|322691850|ref|YP_004221420.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
longum JCM 1217]
gi|189429024|gb|ACD99172.1| Preprotein translocase subunit [Bifidobacterium longum DJO10A]
gi|316915116|gb|EFV36548.1| eubacterial secY protein [Bifidobacterium sp. 12_1_47BFAA]
gi|320456706|dbj|BAJ67328.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 445
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 203/431 (47%), Gaps = 27/431 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 74
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLF 65
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 135 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYQCDQVIPDGSVFNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 246
GQG S++I + I +G+ L+++ G+ W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTDGTDGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
VK I N + W Y +YA + F F I P E AD + + G IP
Sbjct: 298 SDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFFYTSITFNPDETADNMKQYGGFIP 355
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++ G AT YLT + G + L +A T+L L +N G T++LII G
Sbjct: 356 GIRAGNATSRYLTYVMNRLNTVGAVYLLFVALIPTVLIMAL-GLNAKLPFGGTTILIIAG 414
Query: 425 SIIELRRSYQA 435
++ R +A
Sbjct: 415 VGLDTLRQAKA 425
>gi|386383945|ref|ZP_10069369.1| preprotein translocase subunit SecY [Streptomyces tsukubaensis
NRRL18488]
gi|385668610|gb|EIF91929.1| preprotein translocase subunit SecY [Streptomyces tsukubaensis
NRRL18488]
Length = 439
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 212/440 (48%), Gaps = 32/440 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD--RRLIPQDYLSFVSGSVDE 72
+L A +F ++R++L T +IV+ R+G +P+PG D + I D + + S+
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVLFRLGSHVPVPGVDYNKVQICVDQAAESNNSLFG 60
Query: 73 LGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
L + GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 61 LVNMLSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRY 120
Query: 130 ISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICD 180
+++ A+L+ + + ++ S+ +V + G + W+ +
Sbjct: 121 LTVALAVLQGTGLVATARSGMLFQGCSVGTQIVPDRSIFTTIVMVVTMTAGTAAVMWLGE 180
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKML-SQLLGSSVRWWPFMLGLLGVFTIVTMWA 239
I++ G G G S+++ + I G+ +L+ + S L W F +L F +V +
Sbjct: 181 LITDRGIGNGMSILMFISIAAGFLGSLWAIKESGKLADG--WIEFGTVILIGFVMVAL-V 237
Query: 240 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V V + R++ +QY + + + YIP +N +G+ PV+ + LL P++
Sbjct: 238 VFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPAL 292
Query: 300 LASI-LGSPFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADY 355
+A G+ W K + G P+ Y+ + FF F + I+ P+++AD
Sbjct: 293 IAQFSSGTSSW---KTWIEAHLVKGDHPYYIATYFLLIVFFAFFY--VAISFNPEDVADN 347
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
+ K G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G
Sbjct: 348 MKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGGANQNFPFG 407
Query: 416 FTSVLIIVGSIIELRRSYQA 435
TS+LIIVG +E + ++
Sbjct: 408 GTSILIIVGVGLETVKQIES 427
>gi|116334249|ref|YP_795776.1| preprotein translocase subunit SecY [Lactobacillus brevis ATCC 367]
gi|116099596|gb|ABJ64745.1| protein translocase subunit secY/sec61 alpha [Lactobacillus brevis
ATCC 367]
Length = 436
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 218/432 (50%), Gaps = 32/432 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L++ +F +IR ++ T +++++ R+G +I +PG + + + Q S SG V L
Sbjct: 1 MLSSLKNAFKIKDIRNKILFTLLVLIVFRLGTYITVPGINAKAL-QSVAS--SGLVSILD 57
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
F G S F +G+SP I A I++Q+L IVP V+ K+G G K+ +++
Sbjct: 58 TFSGGGLSNYSIFAMGVSPYITAQIVIQLLQMDIVPRFVEWSKQGDVGRRKLNQATRYLA 117
Query: 132 LGFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+ A ++++ I A +S S+ + SV+ + +L G M +W+ D I++ G G
Sbjct: 118 IALAFVQSIGITAGFSALSSLKLVQNPSVETYLSIGLILTGGTMLTTWMGDMITDRGLGN 177
Query: 190 GSSLIICVGILTGYTETLYKMLSQLL--GSSVRWWP---FMLGLLGVFTIVTMWAVVVTE 244
G S+II GI+ +++Y++ SS WW F+LGL+ + I+ + V +
Sbjct: 178 GISMIIFAGIIARTPKSVYQLYQTYFVDVSSSGWWKSGLFILGLIVLVLIIVTFVTWVQQ 237
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASI 303
R+V +QY + S + + S Y+P +N +G+ PV+ + +A P +IL +
Sbjct: 238 AERRVPIQYT--RRVSGSPDSS-------YLPLKVNVAGVIPVIFASSFIATPQTILMAF 288
Query: 304 LGS----PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKM 359
+ ++Q + ++ N +T GA + YT+ F F N P+++A+ L K
Sbjct: 289 QNTHSQDAWYQTLTDVFNMQTLDGA---ILYTVLIVVFTFFYAFVQVN-PEKLAENLQKQ 344
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G+ IP V PG T Y++ + G L L ++ +L L ++E +G TS+
Sbjct: 345 GSYIPGVWPGHETQSYVSSLLMRLSTVGALFLGFVSLIP-LLAQNLWNLDESIGLGGTSL 403
Query: 420 LIIVGSIIELRR 431
LI+VG IE R
Sbjct: 404 LIVVGVAIETMR 415
>gi|313667461|ref|YP_004047745.1| preprotein translocase subunit SecY [Neisseria lactamica 020-06]
gi|313004923|emb|CBN86349.1| preprotein translocase SecY subunit [Neisseria lactamica 020-06]
Length = 436
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 210/429 (48%), Gaps = 23/429 (5%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
++++RL +V+ RIG IP+PG D + + Y S G + L F G+ + S
Sbjct: 15 DLKKRLVFLLGALVVFRIGAHIPVPGVDAVALAKLYESAGGGILGILNMFSGGSLERFSI 74
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++ AIL+++ VA
Sbjct: 75 FAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKLITKYTRYGTVLLAILQSLGVAS 134
Query: 145 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 204
+ I S S + + T LV G M + W+ + I+E G G G SLII GI +G
Sbjct: 135 FVFQRGIVVTS-SFEFYVSTVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIASGIP 193
Query: 205 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV--TEGCRKVKLQYYGFKLASAA 262
+ ++++ + ++ ++ LL VF ++ + +VV RK+ + Y A
Sbjct: 194 SGITRLVAFVNQGTMS---ILMALLIVFGVLLLIYLVVYFESAQRKIPIHY-------AK 243
Query: 263 RE-DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETS 321
R+ +S + ++PF +N +G+ P + + ++ FPS L GS + +
Sbjct: 244 RQFNSGLGNHNTHMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSTDTNSILYKIVGLLQ 303
Query: 322 VGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKI 379
G +Y ++A V F F A PKE+A+ L K GA +P ++PG+ T YL K+
Sbjct: 304 HGQS--LYMVLFAATVIFFCYFYTALFFSPKEMAENLKKSGAFVPGIRPGEQTSRYLEKV 361
Query: 380 QASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
+G L ++I+ L L N F +G TS+LI+V ++ +Y +
Sbjct: 362 VLRLTLFGALYITIICLIPEFLTTVL---NVPFYLGGTSLLILVVVTMDFSTQINSYRLT 418
Query: 440 PSLSKALRR 448
K + R
Sbjct: 419 QQYDKLMIR 427
>gi|422338811|ref|ZP_16419771.1| preprotein translocase, SecY subunit [Fusobacterium nucleatum
subsp. polymorphum F0401]
gi|355371938|gb|EHG19281.1| preprotein translocase, SecY subunit [Fusobacterium nucleatum
subsp. polymorphum F0401]
Length = 426
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 209/423 (49%), Gaps = 32/423 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 81
E+R R+ T ++ +++R+G IP PG D D LS ++ D L GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVDV-----DRLSSMASQSDVLSYINMFSGGAFTR 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGTG 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLIYNPGLSFFVRTVTTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 260
++ + + + G+ ++ +L L+ VT+ +V+ + G RK+ + Y G S
Sbjct: 193 RAPSSVIQTIQTMQGN--KFLIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFTS 250
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
YIP +N +G+ PV+ + + P ++ + L P +K L+
Sbjct: 251 KGGMGQ-----NSYIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PSTLSIKTTLS--I 301
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTK 378
G VY +YA + F+ F A + P+++A+ L + G IP ++PG+ T+EYL
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFFYTALVFDPEKVAENLKQGGGTIPGIRPGEETVEYLEG 361
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQAY 436
+ + + GGL L+I++ + Y+ + G + G T ++I+VG ++ + A+
Sbjct: 362 VASRITWGGGLFLAIIS-----ILPYVIFTSMGLPVYFGGTGIIIVVGVALDTIQQIDAH 416
Query: 437 NVM 439
VM
Sbjct: 417 LVM 419
>gi|294101648|ref|YP_003553506.1| preprotein translocase subunit SecY [Aminobacterium colombiense DSM
12261]
gi|293616628|gb|ADE56782.1| preprotein translocase, SecY subunit [Aminobacterium colombiense
DSM 12261]
Length = 432
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 214/440 (48%), Gaps = 25/440 (5%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR----RLIPQDYLSFVSGSV 70
+L++ ++F +++RR+ T ++ I R+G IP PG D RL Q + V G +
Sbjct: 1 MLDSFRDAFKLPDLKRRILFTLGVLFIFRLGAHIPTPGIDTAAMARLFEQG--AGVLGFL 58
Query: 71 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
D GA + F LG++P I +SI+ Q+L + P+L +++KE DG +KI + W
Sbjct: 59 DIFAG-GALRRFGIFALGVTPYINSSIVFQLLVVVFPALEKMQKESEDGRKKIIQFTRWG 117
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
++ FA ++AV + + I+ S + ++ + GA+T+ W+ + I++ G G G
Sbjct: 118 TILFAGIQAVGMTFWLGRLGIF--SGGLFAGLIVVLTVTAGAVTVMWLGEEITDHGIGNG 175
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SL+I GI+ E + + L + +L +G+ +V +++ EG R++
Sbjct: 176 ISLLIFAGIVARIPEAILRSWQMLRLGEMNILVLILA-IGLMFVVIAGCILLQEGQRRLP 234
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
+QY A + +IP +N +G+ P++ + +L FP +A
Sbjct: 235 VQY-----AKRVVGNKVYGGQSTFIPLKVNQAGVMPIIFASSVLLFPYSIARFFTGNIAT 289
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKP 368
V+++ P + VY +Y + F F A + P +IA+ + K G I ++P
Sbjct: 290 MVQKMFEPGSV------VYIVLYISLIIFFAYFYTAVVFNPADIANNMKKYGGFILGIRP 343
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G+ T E++ K+ + G + L+I+A T++ + + + F G T+VLI+VG ++
Sbjct: 344 GRPTSEFIEKVMSRITLGGAVFLAIIALLPTLMTNLMGITS--FYFGGTAVLIVVGVALD 401
Query: 429 LRRSYQAYNVMPSLSKALRR 448
+ +M L+R
Sbjct: 402 TVHQIEGQLLMRHYEGILKR 421
>gi|416032635|ref|ZP_11572903.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|347999818|gb|EGY40632.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
Length = 436
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 207/434 (47%), Gaps = 28/434 (6%)
Query: 26 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGII 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + + Q + +L + + VT + V V G R++K++Y A
Sbjct: 195 AGLPAAIGQTIEQARLGQMHLLVLLL-IAVIVLAVTYFVVFVERGQRRIKVEY-----AK 248
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 316
+ + ++P +N +G+ P + + ++ FP+ L +G + + +L
Sbjct: 249 RQQGKQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLL 308
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
+P +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 309 HP-----GQP-LYLVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSR 362
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ KI GGL ++ + I+ N F G TS+LI+V I++ Q
Sbjct: 363 YIDKIMTRLTLIGGLYVTFVCLVPYIMTAAW---NVQFYFGGTSLLIVVVVIMDFIVQIQ 419
Query: 435 AYNVMPSLSKALRR 448
++ + AL++
Sbjct: 420 SHLMSTRYESALKK 433
>gi|145219081|ref|YP_001129790.1| preprotein translocase subunit SecY [Chlorobium phaeovibrioides DSM
265]
gi|145205245|gb|ABP36288.1| protein translocase subunit secY/sec61 alpha [Chlorobium
phaeovibrioides DSM 265]
Length = 443
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 208/432 (48%), Gaps = 40/432 (9%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
E+R+R+ T +L+ + R+G I +PG D L+ + S S D G F GA +
Sbjct: 15 ELRQRILYTLLLLFVYRLGSHITIPGVDASLVAG---ASNSHSNDLFGLFDLFVGGAFAR 71
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-V 140
S F LGI P I ASI++Q+L + P +L+KEG +G +KI + ++ A L+A
Sbjct: 72 ASIFSLGIMPYISASIIIQLLGAVTPYFQKLQKEGEEGRQKINQMTRFGTVLIASLQAWG 131
Query: 141 IVACYSLPYSIYAA---SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ S P S A + +L + + W+ + I+E G G G SLII +
Sbjct: 132 VSVSLSSPASFGQAVVPDPGLFFSFSAVIILTASTVFVMWLGERITEQGIGNGISLIIMI 191
Query: 198 GILTGYTETLY-KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY--- 253
GIL + ++L + S LGS + W + +L + + + VV+T G R+V +Q+
Sbjct: 192 GILAAFPQSLVAEFRSVSLGS--KNWIIEIIILAMMVAIVAFVVVLTVGTRRVPVQHAKR 249
Query: 254 -YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
G K+ + YIP IN +G+ P++ ++ P S
Sbjct: 250 VVGRKVYGGGTQ---------YIPMKINTAGVMPIIFAQSIMFLPGTFLSFFPD------ 294
Query: 313 KEILNPETSVGA-RPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPG 369
E++ +S+ A W Y ++ + F F IA PKE+AD + + G IP V+PG
Sbjct: 295 NEVMQSMSSIFAYDSWWYALMFGTMILFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPG 354
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--IGFTSVLIIVGSII 427
K+T +++ I G + L+++A T L + + GF+ G TS+LIIVG +
Sbjct: 355 KSTADFIDNILTRITLPGAVSLALIAVLPTFLTKF-ANVTPGFAQFFGGTSLLIIVGVGL 413
Query: 428 ELRRSYQAYNVM 439
+ + +++ +M
Sbjct: 414 DTLQQVESHLLM 425
>gi|255530534|ref|YP_003090906.1| preprotein translocase subunit SecY [Pedobacter heparinus DSM 2366]
gi|255343518|gb|ACU02844.1| preprotein translocase, SecY subunit [Pedobacter heparinus DSM
2366]
Length = 444
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 205/417 (49%), Gaps = 18/417 (4%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 85
E++ R+ T +++++ R + LPG D L+ + S + G +D G+ ++S
Sbjct: 15 QELKERIIFTLMILLVYRFVSHVVLPGVDATLLGDNTKSGILGLLDMFAG-GSFSRVSIL 73
Query: 86 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACY 145
LG+ P I ASI++Q+L VPS +++KEG G +K+ ++++ ++AV
Sbjct: 74 ALGVMPYISASIVVQLLGIAVPSFQKMQKEGESGRKKLNQITRYLTVAITAVQAVGYVKT 133
Query: 146 SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 205
+P H++ V+ T F+L G + + W+ + I++ G G G SLII VGI+
Sbjct: 134 QVPAEAIIIDHTLFFVLAT-FVLSAGTLFVMWLGEKITDKGIGNGISLIIMVGIIARLPI 192
Query: 206 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 265
L + +S ++ ++ +F +V M+ +++ +G RKV +QY A +
Sbjct: 193 ALQQEISSRFVGDGGLIALVVEIVALFAVV-MFTIMIVQGVRKVPVQY-----AKRIVGN 246
Query: 266 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI-LNPETSVGA 324
V YIP +N +G+ P++ L+ P+ L P Q+ I + TS+
Sbjct: 247 RQFGGVRQYIPLKVNAAGVMPIIFAQALMFIPATLTGFF--PSLQNTWLIQFSDYTSLA- 303
Query: 325 RPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQAS 382
Y +AF + F F I P +++D + K G IP +KPG +T ++ + +
Sbjct: 304 ----YSLTFAFLIIAFTFFYTAITVNPTQMSDDMKKNGGFIPGIKPGLSTSSFIDDVISK 359
Query: 383 TRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
F G + L+I+A +I + + G TS+LI+VG +++ + ++Y +M
Sbjct: 360 ITFPGAVFLAIIAILPSIAVKFGIKSEFAHFYGGTSLLILVGVVLDTLQQIESYLLM 416
>gi|384085346|ref|ZP_09996521.1| preprotein translocase subunit SecY [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 443
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 211/434 (48%), Gaps = 49/434 (11%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS---GSVDELGDF-----G 77
+E+R R+ +++ RIG IP+PG D P SF + G++ LG F G
Sbjct: 18 NELRNRILFLLGALLVFRIGAHIPVPGID----PAAMASFFNEQRGTI--LGMFNMFSGG 71
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
A +L+ F LGI P I ASI+ Q+ + P L +L+KEG G KI Y + ++G A++
Sbjct: 72 ALSRLTVFALGIMPYISASIIFQLAGSVFPKLEELKKEGESGRRKITEYTRYATVGLALM 131
Query: 138 EAVIVACY-------SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
+ + +A +P I + T L CG + + WI + I+E G G G
Sbjct: 132 QGLGIAVAIEKMHAGHIPVVI---DPGPLFLFTTTISLACGTVFLMWIGEQITERGIGNG 188
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKV 249
SLII GI+ G + + L + ++ P F++ L + +VT + V + R+V
Sbjct: 189 ISLIIFAGIVAGLPDAIGTTFE--LMQTGQFQPLFVVALFVLALLVTAFVVFMESAQRRV 246
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL----ASILG 305
+QY ++ ++P +N SG+ P + T +L P+ L A++ G
Sbjct: 247 PIQYAKRQVGRKIYGGQ-----STHMPLKVNMSGVIPPIFATSILLLPATLSGWFANVPG 301
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFN--IFDIANLPKEIADYLNKMGARI 363
+ + L+P +++ V+ T FF F + +F+ P++ AD L K GA +
Sbjct: 302 MEWLARFGQALSPGSALYV--VVFTTAIVFFAFFYTAMVFN----PRDTADNLKKSGAFV 355
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLII 422
P ++PG+ T Y+ +I WG + L+++ +L +L + N F +G TS+LI+
Sbjct: 356 PGIRPGEHTARYMDRILTRLTLWGAIYLTLVC----LLPEFLIVQYNVPFYLGGTSLLIV 411
Query: 423 VGSIIELRRSYQAY 436
V +++L Q++
Sbjct: 412 VVVMMDLMGQIQSH 425
>gi|440752074|ref|ZP_20931277.1| preprotein translocase, SecY subunit [Microcystis aeruginosa
TAIHU98]
gi|440176567|gb|ELP55840.1| preprotein translocase, SecY subunit [Microcystis aeruginosa
TAIHU98]
Length = 424
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 208/419 (49%), Gaps = 25/419 (5%)
Query: 28 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQL 87
+R RL +T L+V+ R G F+P+PG DR + + S + + +L G L F L
Sbjct: 9 LRGRLLITLGLLVLLRFGMFVPIPGLDRARLAEIIQSNAALGILDLFTGGGLSTLGIFAL 68
Query: 88 GISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYS 146
GI P I ASI++Q+L +PSL L+K EG G KI +I+ ++I++++ +
Sbjct: 69 GILPYINASIIVQLLTAALPSLEDLQKNEGEAGRRKIAQITRYIAFAWSIIQSIGI-TLG 127
Query: 147 LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTET 206
L + + ++ + T LV G+M + WI + I+E G G G+SL+I V I+ +T
Sbjct: 128 LLVANGVVAGTLPSIAATVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKT 187
Query: 207 LYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDS 266
L ++ + ++ LL VF ++ + V V EG R++ + SA R+
Sbjct: 188 LGDTITFAQQGGRQAIAQVVILLLVFLVMIIGIVFVQEGTRRI-------PIVSARRQVG 240
Query: 267 P--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPFWQHVKEILNPETSV 322
E Y+P +N G+ P++ + +L P L L +P Q + +++N
Sbjct: 241 RRLYRERTSYLPLRLNQGGVMPIIFASAVLVLPFQLVQALPTDNPVGQVLVQLVN----- 295
Query: 323 GARP--WVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
RP W Y Y+ + F+ F I N PK+++ L KMG IP ++PG AT YL
Sbjct: 296 ALRPDSWGYVAFYSLLILGFSFFYASLIVN-PKDMSQNLKKMGTSIPGIRPGTATTNYLE 354
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ G L LS++AT T+++ + +G TS+LI+VG I+ + Q Y
Sbjct: 355 GVLNRLTLLGALFLSLVATVPTVVESA-TGVTTFRGLGATSLLILVGVAIDTAKQIQTY 412
>gi|255326863|ref|ZP_05367939.1| preprotein translocase, SecY subunit [Rothia mucilaginosa ATCC
25296]
gi|422324327|ref|ZP_16405364.1| preprotein translocase subunit secY [Rothia mucilaginosa M508]
gi|255296080|gb|EET75421.1| preprotein translocase, SecY subunit [Rothia mucilaginosa ATCC
25296]
gi|353344383|gb|EHB88695.1| preprotein translocase subunit secY [Rothia mucilaginosa M508]
Length = 435
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 196/428 (45%), Gaps = 34/428 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV-SGSVDELGDF---GAELK 81
+++RR+L T +IV+ R+G FIP PG + Q + V SG V ++ + GA L+
Sbjct: 12 ADLRRKLLFTLAMIVLYRVGTFIPAPGVSYGNVQQCLNANVTSGGVYDIVNLFSGGALLQ 71
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
LS F LG+ P I ASI++Q+L ++P +L EG G K+ Y ++++ A+L A
Sbjct: 72 LSIFALGVMPYITASIIIQLLRVVIPRFQELHDEGAQGQAKLTQYTRYLTIALALLNATT 131
Query: 142 VACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+ + + V H+++ L G + W+ + I+E G G G SL+I
Sbjct: 132 IVSMARSGVLLGNCPGIIPQDDVLHILLIIVTLCAGTTVIMWMGEQITERGVGNGMSLLI 191
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
I + + L + W + G+ +V + V V + R++ +QY
Sbjct: 192 FTSIASSFPSALGSI------QRTHGWGIFAAVCGIGLLVMLAVVYVEQSVRRIPVQY-- 243
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI----LGS--PFW 309
A I YIP +N +G+ P++ + LL P ++A GS P W
Sbjct: 244 ---AKRMIGRRTIGGTSTYIPLKVNMAGVIPLIFASSLLTLPGLIAQFNTPTDGSTPPDW 300
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVK 367
+ +N G P +Y +Y F + F F +A P E+AD + K G IP ++
Sbjct: 301 VN---WINAYLVRGDHP-LYIALYFFMIIGFAYFYVAVTFDPVEVADNMKKYGGFIPGIR 356
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
GK T YL+ + G L L +++ ++ L N+ F G S+LI+VG +
Sbjct: 357 AGKPTERYLSYVLNRITLPGALYLGVISMIP-LVALILFNANQNFPFGGASLLIVVGVGL 415
Query: 428 ELRRSYQA 435
+ + A
Sbjct: 416 DTLKQINA 423
>gi|269122561|ref|YP_003310738.1| preprotein translocase subunit SecY [Sebaldella termitidis ATCC
33386]
gi|268616439|gb|ACZ10807.1| preprotein translocase, SecY subunit [Sebaldella termitidis ATCC
33386]
Length = 429
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 201/413 (48%), Gaps = 17/413 (4%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDFGAELKLSFF 85
E+R+R+ T ++ +++R+G I +PG D RL + ++G ++ G + S F
Sbjct: 19 ELRKRVVFTLIMFLVARVGVHIQVPGIDVSRLSSAMQGNSLAGFINTFSGGGFQ-NASMF 77
Query: 86 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV-IVAC 144
LGI P I +SI+ Q+L +VP L +++KEG EK+ + ++++G AI ++ +
Sbjct: 78 ALGIIPYINSSIIFQLLGVVVPKLEEMQKEGGKEKEKVTQWTRYLTIGVAIAQSFGLTIL 137
Query: 145 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 204
+Y +VT L+ G + W+ + IS G G G+S++I + I++
Sbjct: 138 LQQQQLVYEPGP--MFTLVTVTLMTGGTAFLMWVAERISLKGIGNGTSMLIFLSIVSRLP 195
Query: 205 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE 264
+Y++ L S ML + +F I+ V++ R++ +QY G R
Sbjct: 196 AEMYQIGKNLSTSGGMGLVLMLITIVLFVILIAVIVLIQLAERRIPIQYVG-----KGRT 250
Query: 265 DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGA 324
+ ++P IN SG+ P++ + L+A PS+L S++ P + L +T VG
Sbjct: 251 GRSSVGQKTFLPLKINMSGVMPIIFASVLMAVPSVLISLVKDPSLNAKLKNLFSQTGVGY 310
Query: 325 RPWVYYTIYAFFVFLFNI-FDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQAST 383
+ F F +I FD P+++AD L + GA +P +PG T++YL +
Sbjct: 311 LVLYAVLVVLFAFFYTSIVFD----PEKVADNLKQGGATVPGKRPGSETVDYLEGVATRI 366
Query: 384 RFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
F + L++L I Y ++ S TS+LI+VG ++L + ++
Sbjct: 367 TFGSAVFLAVLGVLPNIFFGYFLKMPVLMS--GTSLLILVGVAVDLLQQIDSH 417
>gi|372222895|ref|ZP_09501316.1| preprotein translocase subunit SecY [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 447
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 207/426 (48%), Gaps = 27/426 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
E+R R+ +T L+++ R G + LPG D + Q + SG + L F GA S
Sbjct: 15 EELRNRILITLGLLLVYRFGAQVVLPGIDTTQLSQLTSNTESGILGILNAFTGGAFANAS 74
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI-- 141
F LGI P I ASI++Q++ +P L +L KEG G + W+++ I++A
Sbjct: 75 VFALGIMPYISASIVVQLMSIAIPYLQKLDKEGESGRKTKNQITRWLTIAICIVQAPTYL 134
Query: 142 --VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
+ +P S + + ++ + +LV G + W+ + I++ G G G SL+I +GI
Sbjct: 135 YGLGALGVPDSAFVLGKGLDFIVPSVIILVTGCVFAMWLGERITDKGIGNGISLLIMIGI 194
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 259
+ + + ++ F+L + V+ +V + +V++ R++ +Q Y + A
Sbjct: 195 IATMPQAFLQEFVSRTTNNTGGLMFILIEVIVWFLVILASVLLVMAVRQIPVQ-YARRTA 253
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF---WQHVK--E 314
S E + + YIP +N SG+ P++ ++ PS++ + W V+ +
Sbjct: 254 SGGYEKN-VMGSRQYIPLKLNASGVMPIIFAQAIMFAPSLIGRTFNNTAAGQWMEVQFAD 312
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIA-NLP-KEIADYLNKMGARIPNVKPGKAT 372
I W Y ++A + +F F A +P ++AD L + G +P ++PGK T
Sbjct: 313 IFG---------WAYNILFAALIIIFTYFYTAITVPTNKMADDLKRSGGFVPGIRPGKET 363
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELR 430
+YL KI + F G + L++LA I+ L + G+++ G TS+LI+VG I+
Sbjct: 364 ADYLDKIMSLITFPGSIFLALLAVLPAIVVK-LMDVQSGWALFYGGTSLLIMVGVAIDTV 422
Query: 431 RSYQAY 436
+ +Y
Sbjct: 423 QQVNSY 428
>gi|296454850|ref|YP_003661994.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
longum JDM301]
gi|296184282|gb|ADH01164.1| preprotein translocase, SecY subunit [Bifidobacterium longum subsp.
longum JDM301]
Length = 445
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 203/431 (47%), Gaps = 27/431 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 74
++ E+R+++ +IV+ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIVVYRIGSFIPTPGVDYNVVNKCMATMGSASQENFIGLVNLF 65
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 135 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYRCDQVIPDGSVWNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 246
GQG S++I + I +G+ L+++ G + W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGKNGDWTKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
VK I N + W Y +YA + F F I P E AD + + G IP
Sbjct: 298 SDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFFYTSITFNPDETADNMKQYGGFIP 355
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++ G AT YLT + G + L +A T+L L +N G T++LII G
Sbjct: 356 GIRAGNATSRYLTYVMNRLNTVGAVYLLFVALIPTVLIMAL-GLNAKLPFGGTTILIIAG 414
Query: 425 SIIELRRSYQA 435
++ R +A
Sbjct: 415 VGLDTLRQAKA 425
>gi|384197710|ref|YP_005583454.1| preprotein translocase subunit SecY [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|333109804|gb|AEF26820.1| preprotein translocase, SecY subunit [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|339479822|gb|ABE96290.1| Protein translocase subunit secY [Bifidobacterium breve UCC2003]
Length = 445
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 203/431 (47%), Gaps = 27/431 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 74
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLF 65
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 135 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYKCDQVIPDGSVWNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 246
GQG S++I + I +G+ L+++ G+ W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGTDGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
VK I N + W Y +YA + F F I P E AD + + G IP
Sbjct: 298 SDQSWVKWI-NNNLANTTSVW-YIALYALMIVFFCFFYTSITFNPDETADNMKQYGGFIP 355
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++ G AT YLT + G + L +A T+L L +N G T++LII G
Sbjct: 356 GIRAGNATSRYLTYVMNRLNTVGAVYLLFVALIPTVLIMAL-GLNAKLPFGGTTILIIAG 414
Query: 425 SIIELRRSYQA 435
++ R +A
Sbjct: 415 VGLDTLRQAKA 425
>gi|291457223|ref|ZP_06596613.1| preprotein translocase, SecY subunit [Bifidobacterium breve DSM
20213 = JCM 1192]
gi|417941896|ref|ZP_12585177.1| Preprotein translocase, SecY subunit [Bifidobacterium breve CECT
7263]
gi|291381058|gb|EFE88576.1| preprotein translocase, SecY subunit [Bifidobacterium breve DSM
20213 = JCM 1192]
gi|376167884|gb|EHS86703.1| Preprotein translocase, SecY subunit [Bifidobacterium breve CECT
7263]
Length = 445
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 203/431 (47%), Gaps = 27/431 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 74
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATTGSASQENFIGLVNLF 65
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 135 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYKCDQVIPDGSVWNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 246
GQG S++I + I +G+ L+++ G+ W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGTDGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
VK I N + W Y +YA + F F I P E AD + + G IP
Sbjct: 298 SDQSWVKWI-NSNLANTTSVW-YIALYALMIVFFCFFYTSITFNPDETADNMKQYGGFIP 355
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++ G AT YLT + G + L +A T+L L +N G T++LII G
Sbjct: 356 GIRAGNATSRYLTYVMNRLNTVGAVYLLFVALIPTVLIMAL-GLNAKLPFGGTTILIIAG 414
Query: 425 SIIELRRSYQA 435
++ R +A
Sbjct: 415 VGLDTLRQAKA 425
>gi|419847796|ref|ZP_14370950.1| preprotein translocase, SecY subunit [Bifidobacterium longum subsp.
longum 1-6B]
gi|386410041|gb|EIJ24853.1| preprotein translocase, SecY subunit [Bifidobacterium longum subsp.
longum 1-6B]
Length = 456
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 203/431 (47%), Gaps = 27/431 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 74
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLF 65
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 135 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYQCDQVIPDGSVWNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 246
GQG S++I + I +G+ L+++ G + W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGKNGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
VK I N + W Y +YA + F F I P E AD + + G IP
Sbjct: 298 SDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFFYTSITFNPDETADNMKQYGGFIP 355
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++ G AT YLT + G + L +A T+L L +N G T++LII G
Sbjct: 356 GIRAGNATSRYLTYVMNRLNTVGAVYLLFVALIPTVLIMAL-GLNAKLPFGGTTILIIAG 414
Query: 425 SIIELRRSYQA 435
++ R +A
Sbjct: 415 VGLDTLRQAKA 425
>gi|295396450|ref|ZP_06806612.1| preprotein translocase subunit SecY [Brevibacterium mcbrellneri
ATCC 49030]
gi|294970752|gb|EFG46665.1| preprotein translocase subunit SecY [Brevibacterium mcbrellneri
ATCC 49030]
Length = 433
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 201/429 (46%), Gaps = 30/429 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSV 70
+L +F ++R +L T +IV+ R+G FIP PG D + + L + +
Sbjct: 1 MLGAIGRAFRTPDLRNKLLFTLGVIVLFRLGSFIPAPGIDYSQVQTCVASPALGQGAFGL 60
Query: 71 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
L GA LKLS F LGI P I ASI+ Q+L ++P L KEG G K+ Y ++
Sbjct: 61 INLFSGGALLKLSIFALGIMPYITASIITQLLRVVIPRFEALHKEGASGQAKLTQYTRYM 120
Query: 131 SLGFAILEA----VIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDT 181
++ AIL A V +L ++ A + +++ + + L G + W+ +
Sbjct: 121 TIALAILNATTLVTTVRTGALFGNVDACMNLIQNDTWWGICIIVLTLTAGTALIMWMGEQ 180
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
I+E G G G S++I + G+ L +L+ G + +GLL V + V
Sbjct: 181 ITERGVGNGMSILIFTSVAAGFPAALNSILTS-KGIDIFAIVLAVGLL-----VILAVVF 234
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
V + R++ +QY A YIP +N +G+ PV+ + +L P++++
Sbjct: 235 VEQSQRRIPVQY-----AKRMVGRRMFGGTSTYIPIKVNQAGVIPVIFASSVLYLPTLIS 289
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKM 359
G P V+ I N + G W+Y YA F F +A P+E+AD + K
Sbjct: 290 Q-FGDPEAGWVQWI-NAHLTRGDH-WIYILTYAVLTIFFAYFYVAITFNPEEVADNMKKY 346
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G IP ++ G+ T +YL+ + F G L L+++A I + N+ F G TS+
Sbjct: 347 GGFIPGIRAGRPTEQYLSYVLTRITFPGSLYLTVVALIPLIALILIDA-NQDFPFGGTSI 405
Query: 420 LIIVGSIIE 428
LI+VG +E
Sbjct: 406 LIVVGVGLE 414
>gi|398784950|ref|ZP_10548071.1| preprotein translocase subunit SecY [Streptomyces auratus AGR0001]
gi|396994840|gb|EJJ05867.1| preprotein translocase subunit SecY [Streptomyces auratus AGR0001]
Length = 437
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 210/439 (47%), Gaps = 32/439 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG-----S 69
+L A +F ++R++L T +IV+ RIG +P+PG + + + + G +
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVLYRIGAHVPVPGVNYANV-ETCMKQAGGNSGLFA 59
Query: 70 VDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
+ + GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGQAKITQYTRY 119
Query: 130 ISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICD 180
+++ AIL+ + + +++ + S S+ + + G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGALFQSCPVASEIVPSDSIFTTITMVITMTAGTGLIMWLGE 179
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
+++ G G G S+++ + I G+ L+++ +L G W ++ V + V
Sbjct: 180 LVTDRGIGNGMSILMFISIAAGFPGALWQI--KLTGKLADGWIEFFAVIAVGLAMVALVV 237
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALV 292
Query: 301 ASILGS-PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYL 356
A GS W + + G P VY Y + F F +A N P+E+AD +
Sbjct: 293 AQFSGSKAAW---ATWIATNFTKGNHP-VYIVTYFLLIVFFAFFYVAISFN-PEEVADNM 347
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++ G+ T EYL+ + + G L L ++A T+ L N+ F G
Sbjct: 348 KKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTV-ALVLFNANQNFPFGG 406
Query: 417 TSVLIIVGSIIELRRSYQA 435
TS+LIIVG +E + ++
Sbjct: 407 TSILIIVGVGLETVKQIES 425
>gi|114797687|ref|YP_761509.1| preprotein translocase subunit SecY [Hyphomonas neptunium ATCC
15444]
gi|114737861|gb|ABI75986.1| preprotein translocase, SecY subunit [Hyphomonas neptunium ATCC
15444]
Length = 451
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 200/440 (45%), Gaps = 28/440 (6%)
Query: 16 LNNAAESFFKS----------EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF 65
+ NAAE ++ +++ R+ T ++V+ R+G FIP+PG D + S
Sbjct: 1 MANAAEQMARNLNFATFAKAKDLQARILFTLGILVLYRLGTFIPIPGLDPSQYAALFESQ 60
Query: 66 VSGSVDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKI 123
SG + + F GA ++ F L + P I ASI++Q++ + PSL +L+KEG G ++I
Sbjct: 61 SSGILGSMNMFAGGAVERMGVFALNVMPYITASIIIQMMTSVSPSLEKLKKEGEAGRKQI 120
Query: 124 KSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTIS 183
Y +++LGFA+++A +A + + S S ++ L G M + W+ + I+
Sbjct: 121 NQYTRYLTLGFALVQAFAIAGGLVAVRLEGIS-SWFFILTGVVTLTGGTMLLMWMGEQIT 179
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 243
G G G SLII GI+ ++ +++Q +SV F+L ++ + + ++ V +
Sbjct: 180 ARGIGNGISLIIFAGIIAEMPRAIFNLVAQARTTSVDIG-FILAIVVMVIALVVFIVFIE 238
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
R++ + Y + + ++P IN SG+ P + T LL P
Sbjct: 239 RSQRRLIIHY-----PKRQQAQGFAQGQKSFLPLKINTSGVIPAIFATALLMLPLTAVGF 293
Query: 304 LGSPFWQHVKEILNP-----ETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYL 356
LG + T+ W Y YA V F F I P+E AD L
Sbjct: 294 LGGNAADTEATGMTGVLGWLATNFAPGSWTYIVTYAVLVAFFAFFYTSIMFNPQETADNL 353
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++PG T Y+ + G L L + +L Y +I F IG
Sbjct: 354 RKYGGFIPGIRPGSNTAAYIDYVLTRLTTIGALYLVFICILPELLRRYFPQIP--FYIGG 411
Query: 417 TSVLIIVGSIIELRRSYQAY 436
TS+LI+V ++ Q++
Sbjct: 412 TSLLIVVSVTMDTVTQIQSH 431
>gi|422348980|ref|ZP_16429872.1| preprotein translocase, SecY subunit [Sutterella wadsworthensis
2_1_59BFAA]
gi|404658740|gb|EKB31604.1| preprotein translocase, SecY subunit [Sutterella wadsworthensis
2_1_59BFAA]
Length = 443
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 197/430 (45%), Gaps = 21/430 (4%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+++ RL A+ +V+ RIG +P+PG D ++ Q + G + F GA + S
Sbjct: 17 GDLKGRLIFLALALVVYRIGAHVPVPGIDPDMLKQLFDEQQGGILGLFNMFSGGALSRFS 76
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI+MQ+L +++P L LRKEG G KI Y + +L + + +A
Sbjct: 77 VFALGIMPYISASIIMQMLSYVLPELEALRKEGESGRRKITQYTRYGTLLLGLFQGFGIA 136
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
+ + T L+ G M + W+ + I+E G G G S+II GI+ G
Sbjct: 137 VALESQAGLVLDPGFMFRITTTISLLTGTMFLMWLGEQITERGLGNGISIIIFAGIVAGL 196
Query: 204 ---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
T L++++S S + + ++ + VT + V + G R++ + Y ++ +
Sbjct: 197 PSGTSGLFQLVSTGAISPLA----AIFVIAIILAVTAFVVFIERGQRRITVNYAKRQIGN 252
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
Y+P +N SG+ P + + L+ FP+ LA S + I +
Sbjct: 253 KIYGGQ-----SSYLPLKMNMSGVIPPIFASSLILFPATLAGWFTS--GDSTRWIRDLAA 305
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTK 378
++ +Y +YA + F F A + PKE A+ L K GA IP ++PG T Y+ +
Sbjct: 306 ALSPGQPLYTLLYAVLIVFFAYFYTALVFNPKETAENLKKSGAFIPGIRPGDQTARYIDR 365
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNV 438
+ G + L + L+ R N F G TS+LI+V ++ QAY +
Sbjct: 366 VLLRLTLGGAVYLVFVCLVPEFLNL---RFNVPFYFGGTSLLIVVVVTMDFMSQVQAYLM 422
Query: 439 MPSLSKALRR 448
LR+
Sbjct: 423 THQYESLLRK 432
>gi|333980389|ref|YP_004518334.1| preprotein translocase subunit SecY [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333823870|gb|AEG16533.1| preprotein translocase, SecY subunit [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 421
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 215/438 (49%), Gaps = 44/438 (10%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFVSGSVDELGDFG 77
E+R +L T ++ + RIG IP+PG + + + + +SG G
Sbjct: 12 DELRSKLLFTLAMLFVFRIGAHIPVPGVNTEVFAKLLETGALFGFFDVISG--------G 63
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
A S F + I+P I ASI+MQ+L ++P+L +L KEG +G +KI Y ++++ A +
Sbjct: 64 AFKNFSIFAMSITPYINASIIMQLLTVVIPALERLAKEGEEGRKKIVQYTRYLTVVLAFI 123
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+A+ ++ ++L S +V H ++ A L G + WI + I+E G G G SL+I
Sbjct: 124 QAIGIS-FALRNQHVLVSPTVGHYLLVALTLTAGTAFLMWIGEQITEKGIGNGISLLIFA 182
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
GI++ +++ L ++ +L LL + +V V V EG R++ +QY
Sbjct: 183 GIVSRVPAGAVRVVEYLQAGTINILSVIL-LLVIGALVIAAIVAVNEGQRRIPVQY---- 237
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 317
A ++P +N +G+ PV+ + +L FP LA+ W N
Sbjct: 238 -AKRVVGRRVYGGQSTHLPLRVNQAGVIPVIFASSILMFPEQLAT------WFQNTWFGN 290
Query: 318 PETSVGARPW---VYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKAT 372
+ A W ++ IYA V F F A + P +IA+ + K G IP ++PG+ T
Sbjct: 291 WYLAFFA--WGTPLHTIIYALLVIGFTYFYTAVIMNPVDIAENIKKYGGFIPGIRPGRPT 348
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYL---RRINEGFSIGFTSVLIIVGSIIEL 429
EY++++ + G + L+++A IL +++ RI + + G T++LI+VG ++
Sbjct: 349 AEYISRVMSRVTLAGAVFLALIA----ILPNFVLLATRIPQIY-FGGTALLIVVGVALDT 403
Query: 430 RRSYQAYNVMPSLSKALR 447
+ +++ +M S +R
Sbjct: 404 MKQVESHMLMRSYQGFIR 421
>gi|373499246|ref|ZP_09589737.1| preprotein translocase, SecY subunit [Fusobacterium sp. 12_1B]
gi|404369343|ref|ZP_10974683.1| preprotein translocase, SecY subunit [Fusobacterium ulcerans ATCC
49185]
gi|313690726|gb|EFS27561.1| preprotein translocase, SecY subunit [Fusobacterium ulcerans ATCC
49185]
gi|371959317|gb|EHO77008.1| preprotein translocase, SecY subunit [Fusobacterium sp. 12_1B]
Length = 426
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 203/423 (47%), Gaps = 32/423 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 81
E+R R+ T ++ +++R+G +IP PG D D L+ ++ D LG GA +
Sbjct: 19 ELRDRIIFTLIMFLVARVGTYIPAPGIDV-----DRLATMTAQSDILGYINMFSGGAFKR 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI+ +L I+P + +++K+G G +I + ++++ A+++
Sbjct: 74 VSIFALGIVPYINASIVFSLLAVIIPKIEEIQKDGEAGRNRINQWTRYLTIAIAVVQGFG 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V C L + + T L G + + WI + IS G G G SL+I + +++
Sbjct: 134 V-CMWLQSVGLVTTPGTLFFLTTVVTLTAGTVFLMWIGEQISIKGIGNGVSLLIFLNVIS 192
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY--GFKLA 259
G ++ + + + GS P ++ + G + V+ G RK+ + Y GF
Sbjct: 193 GGPSSVVQTIQTMKGSKF-LIPVLILIAGAAILTVAGIVIFQLGQRKIPIHYVGKGFSGK 251
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 319
++S YIP +N +G+ PV+ + ++ PS++ + + S + K L
Sbjct: 252 GGMGQNS-------YIPLKLNSAGVMPVIFASVVMMIPSVIINAIPSQY--TFKTTLAMV 302
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLT 377
S + VY +YA + F+ F A + P+++AD L + G IP ++PG T+EYL
Sbjct: 303 FS--QKHPVYMIVYAIVIIFFSFFYTAIVFDPEKVADNLKQGGGTIPGIRPGNETVEYLE 360
Query: 378 KIQASTRF-WGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ TR WGG LA S + N G T ++I+VG I+ + A+
Sbjct: 361 GV--VTRITWGGAFF--LAIISILPYTIFTTFNLPVFFGGTGIIIVVGVAIDTVQQINAH 416
Query: 437 NVM 439
VM
Sbjct: 417 LVM 419
>gi|350424463|ref|XP_003493804.1| PREDICTED: preprotein translocase subunit secY-like [Bombus
impatiens]
Length = 447
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 214/448 (47%), Gaps = 41/448 (9%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGDFGAELK 81
E++RRL + +++ RIG FIP+PG + L+ Q S+ + GA +
Sbjct: 17 GELKRRLLFVLLALIVFRIGSFIPVPGINAGELSALLKQAASDNGIISMFNMFSGGALSR 76
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
S F LGI P I ASI++Q+L I P+L +L+KEG G KI Y + +L AI++A+
Sbjct: 77 ASIFALGIMPYISASIIVQLLTAINPTLAELKKEGESGRRKISQYTRYGTLALAIVQAIG 136
Query: 142 VACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
+A LP +I H V + + LV G M + W+ + I+E G G G S+II
Sbjct: 137 IAT-GLP-NIPGFGHVVVNPGFSFYFIATVSLVTGTMFLMWLGEQITERGVGNGISIIIF 194
Query: 197 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
GI+ G + + + Q + ++ VF I T + V V G R++ + Y
Sbjct: 195 AGIVAGLPVAIGETIEQARSGVLHPLLLLVVAALVFGI-TYFVVFVERGQRRIVVNY--- 250
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPFWQH--- 311
A + ++P IN +G+ P + + ++ P++LAS L W++
Sbjct: 251 --AQRQQGRRIYAAQSSHLPLKINMAGVIPAIFASTIIMLPAMLASWLQGDGQGWRYIFV 308
Query: 312 -VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKP 368
+K+ L+ E +Y +YA + F F A + P+E AD L K GA IP ++P
Sbjct: 309 LIKQYLSQEQP------LYIVLYAAAIIFFCFFYTALVFNPRETADQLKKSGAFIPGIRP 362
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G+ T +Y+ K+ G L ++ + + ++ F G TS+LI+V I++
Sbjct: 363 GEQTAKYIDKVMTRLTLIGALYITFVCLVPMFMTSAMK---VSFYFGGTSLLIVVVVIMD 419
Query: 429 LRRSYQAYNVMPS-----LSKA-LRRYG 450
Q +MP+ L KA L+ YG
Sbjct: 420 FMAQIQTL-MMPNRYESVLKKANLKGYG 446
>gi|213693068|ref|YP_002323654.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|384200294|ref|YP_005586037.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|213524529|gb|ACJ53276.1| preprotein translocase, SecY subunit [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|320459246|dbj|BAJ69867.1| preprotein translocase subunit SecY [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
Length = 445
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 203/431 (47%), Gaps = 27/431 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 74
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLF 65
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 135 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYRCDQVIPDGSVWNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 246
GQG S++I + I +G+ L+++ G + W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGKNGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
VK I N + W Y +YA + F F I P E AD + + G IP
Sbjct: 298 SDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFFYTSITFNPDETADNMKQYGGFIP 355
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++ G AT YLT + G + L +A T+L L +N G T++LII G
Sbjct: 356 GIRAGNATSRYLTYVMNRLNTVGAVYLLFVALIPTVLIMAL-GLNAKLPFGGTTILIIAG 414
Query: 425 SIIELRRSYQA 435
++ R +A
Sbjct: 415 VGLDTLRQAKA 425
>gi|379707079|ref|YP_005262284.1| preprotein translocase subunit SecY [Nocardia cyriacigeorgica
GUH-2]
gi|374844578|emb|CCF61640.1| preprotein translocase subunit SecY [Nocardia cyriacigeorgica
GUH-2]
Length = 440
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 200/428 (46%), Gaps = 45/428 (10%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-------ELG 74
+F ++RR++ T L+ + R G +P PG D R + Q+ + VSG + L
Sbjct: 8 AFRTPDLRRKILFTLGLVALYRAGAALPSPGVDYRAV-QECVDLVSGGENAGIYQLINLF 66
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+
Sbjct: 67 SGGALLQLSVFAIGIMPYITASIIIQLLTVVIPRFEELRKEGQAGQTKMTQYTRYLSIAL 126
Query: 135 AILEAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
A+L+A + + + A S+ +++ ++ GA + W + I+E G
Sbjct: 127 AVLQATGLVALAARGQLLQGCQQDILADTSIFGMIIIVLVMTAGAALVMWFGEQITERGI 186
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGC 246
G G SL+I GI +L G + GL+ V + AV+ V +G
Sbjct: 187 GNGMSLLIFAGIAARIPVEGKAILDSRGG-------LVFGLVCVAAFAIIVAVIFVEQGQ 239
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R++ +QY + S Y+P +N +G+ PV+ + LL P+++A + GS
Sbjct: 240 RRIPVQYAKRVVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLIAQLTGS 294
Query: 307 ------PFWQHV--KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYL 356
+WQ + K ++NP VY IY + F F +A P+E AD +
Sbjct: 295 QNNPDPSWWQELIQKYLVNPSNP------VYIAIYFGMIVFFTYFYVAITFNPEERADEM 348
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI-LDHYLRRINEGFSIG 415
K G IP +PGK T ++L+ + + G + L +A + LD + G
Sbjct: 349 KKFGGFIPGYRPGKPTADHLSFVLSRITLPGSIYLGAVAVLPNLFLDIGNTGGVQNLPFG 408
Query: 416 FTSVLIIV 423
T+VLI+V
Sbjct: 409 GTAVLIMV 416
>gi|338730513|ref|YP_004659905.1| protein translocase subunit secY/sec61 alpha [Thermotoga thermarum
DSM 5069]
gi|335364864|gb|AEH50809.1| protein translocase subunit secY/sec61 alpha [Thermotoga thermarum
DSM 5069]
Length = 426
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 219/437 (50%), Gaps = 40/437 (9%)
Query: 18 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
A ++ FK E+R R+ T +++ R+G +IP+PG + + + F G++ + F
Sbjct: 3 QALKNAFKIKELRDRILFTIAALIVFRLGIYIPIPGINIIAWAEAFKRFGEGAIGGIISF 62
Query: 77 ------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
GA S F + ++P I ASI++Q+L ++PSL ++ +EG +G +K Y +
Sbjct: 63 YDVFTGGALENFSIFAMSVTPYINASIVLQLLSSVIPSLREMLREGEEGRKKFARYTRNL 122
Query: 131 SLGFAILEAVIVACYSL----PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
++ ++ +V+ +SL P + H + VMV ++ G M + W+ D I+E G
Sbjct: 123 TVILGAFQSFVVS-FSLVRQSPDIVAYGLHPMVFVMVATITMLSGTMFLLWLGDRITERG 181
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEG 245
G G S+II GI+ Y ++L L + W F++ + +VT+ ++ V +
Sbjct: 182 IGNGISIIIFAGIVARYPNYFGRILLGRL--DLFGWIFLITI----ALVTVAGIIYVQQA 235
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
R++ +QY A+ YIP +N +G+ P++ + ++ P+ +A + G
Sbjct: 236 ERRISIQY-----ATRITGRRVYGGASTYIPVKVNQAGVIPIIFASAIVMIPAAIAQMTG 290
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARI 363
W +++I GA Y +Y VF F F I P E+A+ + K G I
Sbjct: 291 ---WTALQKIF------GATSPFYVILYGLLVFFFTYFYSVIVFDPHEVAENIKKYGGFI 341
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINE-GFSIGFTSVLII 422
P ++PGK T EY+ KI F G + L I+A +L H+++ +++ IG TS LI
Sbjct: 342 PGIRPGKPTEEYIQKIVNKVTFMGAVFLVIIA----LLPHFVQAVSKVDIVIGGTSTLIA 397
Query: 423 VGSIIELRRSYQAYNVM 439
VG +++ + +A+ +M
Sbjct: 398 VGVALDVVQQMEAHMIM 414
>gi|229829409|ref|ZP_04455478.1| hypothetical protein GCWU000342_01499 [Shuttleworthia satelles DSM
14600]
gi|229791840|gb|EEP27954.1| hypothetical protein GCWU000342_01499 [Shuttleworthia satelles DSM
14600]
Length = 437
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 207/434 (47%), Gaps = 23/434 (5%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F +IRRR++ T +++V+ RIG I LPG + + S G+ D L
Sbjct: 1 MLKTLHNAFKIKDIRRRIWFTLMILVVVRIGSMIHLPGVQGDVF-NNLFSSTGGASDFLD 59
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G+ ++S F L I+P I +SI++Q+L P+L +++++G G +K+ ++++
Sbjct: 60 AITGGSLSQMSIFALNITPYITSSIIVQLLTIAFPALEEMQRDGEQGRKKMTRITRYLTV 119
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
G A+ E++ +A Y + +V L G+ + W+ + I+E G G G S
Sbjct: 120 GLALGESLAMAI-GFGRGGYLVQFNALYVFEVVVALTAGSTILMWLGERITERGVGNGIS 178
Query: 193 LIICVGILTGYTETLYKMLSQLLGS--SVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
+++ + I++ + L + Q + + + L +L + V + V + + RK+
Sbjct: 179 IVLVINIISRIPQDLQTLFKQFISGKAAAKAVLAALVILAIILAVVIMTVYLQDAERKIP 238
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL----GS 306
+QY A R + +IP +N G+ PV+ L+ P ILA++L G+
Sbjct: 239 VQY---SRKIAGRRS--VGGTSSHIPLKVNTGGVIPVIFAQSLMQTPVILAALLGKGNGN 293
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF-----DIANLPKEIADYLNKMGA 361
+ ++L+ W+Y A +V L F I P EIAD + K G
Sbjct: 294 GIGSKILKLLSQSHWFHTTEWIYTIGAAIYVVLIIAFAYFYTSITFNPLEIADNIKKQGG 353
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
IP ++PGK T +YL+ I S G + L+I+ I + N S G TS++I
Sbjct: 354 FIPGIRPGKPTSDYLSGILRSIILIGAVGLTIVTMLPIIFNGLF---NANVSFGGTSLII 410
Query: 422 IVGSIIELRRSYQA 435
IVG +IE + ++
Sbjct: 411 IVGVVIETLKQIES 424
>gi|350567965|ref|ZP_08936371.1| preprotein translocase subunit SecY [Propionibacterium avidum ATCC
25577]
gi|348662217|gb|EGY78886.1| preprotein translocase subunit SecY [Propionibacterium avidum ATCC
25577]
Length = 440
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 212/439 (48%), Gaps = 30/439 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG------ 68
+L+ A +F ++RR++ T ++ + R+G IP+P + I SG
Sbjct: 1 MLSAFANAFRTPDLRRKILFTLFILAVFRLGSVIPVPNVNVSNINTCVSQASSGSSAGLY 60
Query: 69 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
S+ L GA LKL+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SMISLFSGGALLKLAIFALGILPYITASIILQLLTVVIPKLETLKKEGASGQNKITQYTR 120
Query: 129 WISLGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDT 181
+++L +L+A + ++ S S+ ++V + G + W+ +
Sbjct: 121 YLTLVLGLLQATAFVTLATSGRLFTGCALPVVYSTSIFEIIVMILTMTAGTTIVMWMGEL 180
Query: 182 ISESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 239
++E G G G S++I I + ++L+ K+ G + W+ F+L + V ++ M A
Sbjct: 181 VTEHGIGNGMSIMIFTQIAARFPDSLWAIKVARNGAGQAHAWFVFILVI--VIGLLVMAA 238
Query: 240 VV-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 298
VV + +G R++ +QY + S YIP +N SG+ PV+ + +L P
Sbjct: 239 VVFIEQGQRRIPVQYAKRMVGRRMLGGS-----TTYIPLKVNQSGVIPVIFASSILYLPV 293
Query: 299 ILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYL 356
+ A+ P K I + T G P +Y +Y + F F +A P E++D +
Sbjct: 294 LYATF--RPQTDAAKWIGHYFTR-GDHP-IYNIVYFLLIIFFCYFYVAITFDPVEMSDNM 349
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++ GK T +YL + + G L L +++ T+ YL+ N+ F G
Sbjct: 350 KKYGGFIPGIRAGKPTEDYLAYVLSRLTAPGSLYLGLISMIPTLAFVYLKA-NQNFPFGG 408
Query: 417 TSVLIIVGSIIELRRSYQA 435
TS+LIIVG ++ + ++
Sbjct: 409 TSILIIVGVALDTVKQVES 427
>gi|257067040|ref|YP_003153296.1| preprotein translocase subunit SecY [Anaerococcus prevotii DSM
20548]
gi|256798920|gb|ACV29575.1| preprotein translocase, SecY subunit [Anaerococcus prevotii DSM
20548]
Length = 424
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 191/400 (47%), Gaps = 26/400 (6%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
++ AA+ + EIR+R + T +++V+ R+G IP+P D + + Y + VD L
Sbjct: 3 DIIKKAAK---EEEIRKRFYFTLLMLVVYRLGNNIPIPFIDTKALADAYNNIQGTLVDYL 59
Query: 74 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
G LS F LG+ P I ASI+MQ+L ++P L +L +EG G + I+ Y +++
Sbjct: 60 NMLTGGGLSTLSIFALGVQPYITASIVMQLLSVVIPRLEELSREGEQGRKTIQKYTRYVT 119
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+ AI +A+ + ++ +A+ K VM +L+ G M ++W+ +TI+E G G G+
Sbjct: 120 IALAIFQAIAITNGLYGAALSSATGFQKVVM--NIVLIGGTMFVTWMGETITEKGLGNGT 177
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SLII +GI+ + T+ + Q L ++ + + ++ + V ++EG RKV +
Sbjct: 178 SLIIFMGIIASFPRTIARW-KQGLHYDTTSIVSIIIMAIIVVLIVLAVVEISEGERKVPI 236
Query: 252 QY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
QY G K+ +IP +N G+ P++ + +LA PS L+ + G
Sbjct: 237 QYAKRVVGRKMYGGQ---------STHIPVKVNMGGVMPIIFASAVLAIPSTLSLLFGGN 287
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPN 365
V A VY I + +F F I E A L + G IP
Sbjct: 288 GQNSVANFFQNSVLGFA---VYLLIQTILILVFAYFYNQIQFNTVEYAKQLQQNGGFIPG 344
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL 405
++PGK T ++L + F G + L++L I L
Sbjct: 345 IRPGKPTSDFLANVSTRITFIGSIALALLTIVPAIASRVL 384
>gi|332142186|ref|YP_004427924.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Deep ecotype']
gi|407689208|ref|YP_006804381.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|410863182|ref|YP_006978416.1| preprotein translocase subunit SecY [Alteromonas macleodii AltDE1]
gi|327552208|gb|AEA98926.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Deep ecotype']
gi|407292588|gb|AFT96900.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|410820444|gb|AFV87061.1| preprotein translocase subunit SecY [Alteromonas macleodii AltDE1]
Length = 439
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 211/445 (47%), Gaps = 31/445 (6%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 75
L++ A+S SE++ RL IV+ R+G ++P+PG D ++ D G++ E+ +
Sbjct: 6 LDSGAKSGL-SELKARLLFVLGAIVVFRLGSYVPIPGIDPAVL-ADLFEQQKGTIVEMFN 63
Query: 76 F---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
GA + S LGI P I ASI+MQ+L + P +V+L+KEG G KI Y +++L
Sbjct: 64 MFSGGALERASVLALGIMPYITASIIMQLLSVVHPPMVELKKEGEAGRRKISQYTRYLTL 123
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
AI +++ ++ LP I + LV G M + W+ + I+E G G G
Sbjct: 124 VLAIFQSIGIST-GLPNLINGLVINPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNG 182
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKV 249
S++I GI+ G + + Q + F+L L+G I + VV E G R++
Sbjct: 183 ISILIFAGIVAGLPTAIGQTAEQARQGDINLL-FLL-LIGAIVIALTYLVVFVERGQRRI 240
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---S 306
+ Y A + ++P +N +G+ P + + ++ FP +A G S
Sbjct: 241 VVNY-----AKRQQGRQVFAAQSTHLPLKVNIAGVIPPIFASSIILFPGTIAGWFGQNES 295
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARI 363
W Q V +L+P +P +Y +YA + F F A + P++ AD L K GA I
Sbjct: 296 TAWLQDVALMLSP-----GQP-LYVMLYAAAIIFFCFFYTALVFNPRDTADNLKKSGAFI 349
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PG+ T Y+ K+ G L ++ + + + L N F G TS+LIIV
Sbjct: 350 PGIRPGEQTSRYIDKVMTRLTLAGALYITFIC---LVPEFMLIAWNVPFYFGGTSLLIIV 406
Query: 424 GSIIELRRSYQAYNVMPSLSKALRR 448
I++ Q + + L++
Sbjct: 407 VVIMDFMAQVQTHLMSSQYESVLKK 431
>gi|227487086|ref|ZP_03917402.1| preprotein translocase subunit SecY [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227541750|ref|ZP_03971799.1| preprotein translocase subunit SecY [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227093160|gb|EEI28472.1| preprotein translocase subunit SecY [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227182456|gb|EEI63428.1| preprotein translocase subunit SecY [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 440
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 210/428 (49%), Gaps = 42/428 (9%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-----ELGD 75
++F ++R++L T V+I++ R+G IP PG D I G D L
Sbjct: 6 QAFKDPDLRKKLLFTLVMIILYRVGAQIPSPGVDYVSIAGKLNELTEGQSDVYSMINLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA LKLS F +GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++ A
Sbjct: 66 GGALLKLSVFAIGIMPYITASIIVQLLTVVIPKFEELKKEGQSGQTKMTQYTRYLTVALA 125
Query: 136 ILEAV-IVACYSL------PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+L++ IVA + + H++ +++ + GA+ + W+ + I+E G G
Sbjct: 126 LLQSSGIVALAARGQLLGPQVRVLREGHNIWDLIILVVCMTGGAVLVMWMGELITEKGIG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCR 247
G SL+I GI T L + + + SS P + + V I+ + VV + +G R
Sbjct: 186 NGMSLLIFAGIAT----RLPRDGANIFQSS---GPVVFSTVMVAVIILVVGVVFIEQGQR 238
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--G 305
++ +QY K R+ + Y+P +N G+ PV+ + L+ P ++ I+ G
Sbjct: 239 RIPVQYA--KRMIGRRQYGGTST---YLPLKVNQGGVIPVIFASSLIYVPVLITQIVNSG 293
Query: 306 SP-----FW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLN 357
SP +W ++V L+ +S W Y +Y + F+ F + P + A+ +
Sbjct: 294 SPTPPDNWWMRNVIAYLHAPSS-----WQYIVLYFVLIIFFSYFYVSVQYDPYDQAENMK 348
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI-LDHYLRRINEGFS-IG 415
K G IP ++PG+ T EYL + F G L L I+A I LD + +N G + G
Sbjct: 349 KYGGFIPGIRPGRPTAEYLGFVMNRLLFVGSLYLGIIAILPNIMLDLGVGNLNAGSTPFG 408
Query: 416 FTSVLIIV 423
T++LI+V
Sbjct: 409 GTALLILV 416
>gi|182418829|ref|ZP_02950094.1| preprotein translocase, SecY subunit [Clostridium butyricum 5521]
gi|237666339|ref|ZP_04526324.1| preprotein translocase, SecY subunit [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182377326|gb|EDT74887.1| preprotein translocase, SecY subunit [Clostridium butyricum 5521]
gi|237657538|gb|EEP55093.1| preprotein translocase, SecY subunit [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 428
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 215/443 (48%), Gaps = 41/443 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F E+++++ T +L+ + R+G IP+PG I +YL +S S LG
Sbjct: 1 MLQTLRNAFKVPELKKKILWTILLVAVFRMGSHIPVPG-----INSEYLKSLSQSGGLLG 55
Query: 75 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
+ GA + S LG+ P I ASI++Q+L +P L QL KEG G +KI++ +
Sbjct: 56 FYDMISGGAFSRSSILALGVMPYINASIIIQLLTVAIPQLEQLSKEGETGRKKIQNLTRY 115
Query: 130 ISLGFAILEAVIVACYSLPYSIYAA-SHSVKHV-------MVTAFLLVCGAMTMSWICDT 181
SL A + L Y +A S+S V +V F LV G W+ D
Sbjct: 116 ASLAIA---------FVLAYGTFAMISNSGGAVGLNTMGKVVVIFSLVVGTTFCMWLGDQ 166
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
++ G G G+S++I V I++ T+ M++ S + L GVF + + AV+
Sbjct: 167 LTVKGIGNGTSILIFVNIISRIPTTIASMMTLKEAGSASIVEIV--LFGVFIVFLLGAVL 224
Query: 242 -VTEGCRKVKLQYYG-FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
+ R++ +QY G F +AA S + IP +I S + ++ + ++ FP
Sbjct: 225 FFSLSERRIPVQYAGKFGGGNAAMVKSQSSN----IPLSIIGSAVLAIIFSMSVMEFPKT 280
Query: 300 LASILGSPFWQHVKEIL-NPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYL 356
+A++ G + K IL NP ++ W Y +YA FN F I P E+A+ L
Sbjct: 281 IATLFGGD-KEWAKWILTNPTCVFNSKSWSYMVLYAVLTVFFNWFYTLITFKPDEMAENL 339
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
+K +P V+PG+ T Y + F GG+L +ILA + ++++Y N FS
Sbjct: 340 HKSAGFVPGVRPGEETERYFENVLNRLSFIGGILAAILAITPVMIENYTAFQNTAFS--G 397
Query: 417 TSVLIIVGSIIELRRSYQAYNVM 439
T++LI++ ++ R ++ V+
Sbjct: 398 TALLIVINVALDFTRQVESQMVV 420
>gi|240015076|ref|ZP_04721989.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae DGI18]
gi|240122148|ref|ZP_04735110.1| preprotein translocase subunit SecY [Neisseria gonorrhoeae PID24-1]
Length = 416
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 205/423 (48%), Gaps = 22/423 (5%)
Query: 32 LFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQLGI 89
+F+ LIV RIG IP+PG D + + Y S +G + L F G+ + S F +GI
Sbjct: 1 MFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMFSGGSLERFSIFAIGI 59
Query: 90 SPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPY 149
P I ASI++Q+ I+PSL L+KEG G + I Y + ++ AIL+++ VA +
Sbjct: 60 MPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQ 119
Query: 150 SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYK 209
I S HV T LV G M + W+ + I+E G G G SLII GI +G + K
Sbjct: 120 GIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAK 178
Query: 210 MLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAAREDSPI 268
+++ S+ +L + G ++ + VV E RK+ + Y K R S
Sbjct: 179 LVTLTNQGSMSMLTALLIVFGALLLI--YLVVYFESAQRKIPIHYA--KRQFNGRAGSQN 234
Query: 269 TEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWV 328
T ++PF +N +G+ P + + ++ FPS L GS V + G +
Sbjct: 235 T----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSADTNSVLHKIAGLLQHGQ--LL 288
Query: 329 YYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFW 386
Y ++A V F F A + PKE+A+ L K GA +P ++PG+ T YL K+ +
Sbjct: 289 YMALFAATVIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLF 348
Query: 387 GGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKA 445
G L + T+ ++ +L + N F +G TS+LI+V ++ +Y + K
Sbjct: 349 GALYI----TTICLIPEFLTTVLNVPFYLGGTSLLILVVVTMDFSTQINSYRLTQQYDKL 404
Query: 446 LRR 448
+ R
Sbjct: 405 MTR 407
>gi|398343365|ref|ZP_10528068.1| preprotein translocase subunit SecY [Leptospira inadai serovar Lyme
str. 10]
gi|398348408|ref|ZP_10533111.1| preprotein translocase subunit SecY [Leptospira broomii str. 5399]
Length = 460
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 227/467 (48%), Gaps = 47/467 (10%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L + A F E+R ++F T ++++ R+G I +PG D +++ + + S +G
Sbjct: 1 MLTSIANIFKIPELRNKVFFTLGMLLLFRLGTHITIPGIDPKVV-SAIAADATASEGLVG 59
Query: 75 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
F GA L S F LGI P I +SI+MQ++ +VPSL +L+KEG +G +KI Y +
Sbjct: 60 MFDMFAGGALLNFSIFALGIMPYISSSIIMQLVMVLVPSLQKLQKEGEEGRKKIGQYTKY 119
Query: 130 ISLGFAILEAVIVACYSLPYSIYAASHSVKH------------VMVTAFLLVCGAMTMSW 177
++ ++++ V + +S A + H + + G + + W
Sbjct: 120 GTIILCAVQSLAVIRLAQQWSYGADQKAALHPGLIHSSVESWFFFIALLSITTGTVLLIW 179
Query: 178 ICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM 237
+ + I+E G G G SL+I GI+ ++Y++ + + ++ LL +F ++
Sbjct: 180 LGEQITERGIGNGISLLIFAGIVGRLPSSVYQLFQENFVDGLN----IIILLLLFILLIS 235
Query: 238 WAVVVTEGCRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYL 293
V++T+G RKV LQY G ++ A + IPF +N + + P++ + L
Sbjct: 236 LTVLLTQGVRKVPLQYGKQMVGRRMVQAKSQS---------IPFKVNGASVMPIIFASSL 286
Query: 294 LAFP-SILASILGSPFWQH---VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIAN 347
L FP +I+ I+ P W + + LNP + + VY+ IY + F F I
Sbjct: 287 LLFPQTIIQQIVDIPEWAGWAVLLDYLNPFSQIWYHAAVYFFIYIGLIVFFAYFYTAIQF 346
Query: 348 LPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR- 406
P E+A+ L K IP ++PG T EY+ K+ G + L+ LA + I+ +L
Sbjct: 347 NPAELAENLRKYNGFIPGIRPGSHTKEYIEKVLNRITLPGAIFLAGLALAPYIIIRFLDL 406
Query: 407 RINEG-----FSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
N G ++ G TS+LI+VG +E + ++ +M + L++
Sbjct: 407 GTNSGGGSLVYTFGGTSLLIMVGVALETLKQLESQLLMRNYDGFLKK 453
>gi|256844449|ref|ZP_05549935.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
125-2-CHN]
gi|423319602|ref|ZP_17297477.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
FB049-03]
gi|423320376|ref|ZP_17298248.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
FB077-07]
gi|256613527|gb|EEU18730.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
125-2-CHN]
gi|405587895|gb|EKB61616.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
FB049-03]
gi|405606026|gb|EKB79023.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
FB077-07]
Length = 431
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 214/430 (49%), Gaps = 27/430 (6%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
S L NA F EIR +L+ T ++++ RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKLYFTLFILLLYRIGANITVPGVNAKAITQVAQTGLVPMLDTV 59
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLAL 118
Query: 133 GFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFIQSIGITLGFNALTQMGLVKNQTPQTYIEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 245
S+II GI+ L+++ + + +S RW F + ++ IVT + V +
Sbjct: 179 ISVIIFAGIIARLPSGLWQIYKEEIINNSASDRWQGILFFIAVIVAILIVTQFVTWVEQA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASIL 304
R++ +QY + ++ E ++P +N SG+ PV+ + + P +IL +
Sbjct: 239 DRRIPIQY---------TRRATMSGSESFLPLKVNVSGVIPVIFASSFIVTPATILMAFQ 289
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGAR 362
+ Q +++N S+ P V IY + LF F + P+++A+ L K GA
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGV--IIYTLLIILFTFFYAFVQVNPEKLAENLQKQGAY 347
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP+V PGK T +Y++K+ G L L ++A + ++ + +G TS+LI+
Sbjct: 348 IPSVWPGKDTQDYISKMLMKLSTVGSLFLGLVALLPQLATNFW-NLPSSIGLGGTSLLIV 406
Query: 423 VGSIIELRRS 432
+G ++EL R
Sbjct: 407 IGVVLELSRQ 416
>gi|83949768|ref|ZP_00958501.1| preprotein translocase SecY [Roseovarius nubinhibens ISM]
gi|83837667|gb|EAP76963.1| preprotein translocase SecY [Roseovarius nubinhibens ISM]
Length = 447
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 208/434 (47%), Gaps = 35/434 (8%)
Query: 17 NNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 75
N + +F K +++R+R+F T L++I R+G ++P+PG D + F+ G+ +G
Sbjct: 4 NTSWSAFGKATDLRKRIFFTLGLLIIYRLGTWVPVPGID----GAELREFMEGAAASIGG 59
Query: 76 F------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA ++ F LGI P I ASI++Q++ +VP+L QL+KEG G +KI Y +
Sbjct: 60 MLSMFTGGALGRMGIFALGIMPYISASIIVQLMTAMVPALEQLKKEGEQGRKKINQYTRY 119
Query: 130 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
++ A L++ +A SL A+ + + LV G M + WI + I+ G G
Sbjct: 120 GTVALATLQSYGLAV-SLQSGGLASDPGMFFIASCMITLVGGTMFLMWIGEQITARGIGN 178
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRK 248
G SLII VGI+ L + + G S P ++ + + +VT+ VV E RK
Sbjct: 179 GISLIIFVGIIAELPAALAQFFAS--GRSGAMSPAVIVGVMLMVVVTIAFVVFMERALRK 236
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--- 305
+ +QY ++ + ++P +NP+G+ P + + LL P +++ G
Sbjct: 237 IHIQYPRRQVGMKVYDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGNQT 291
Query: 306 SPFWQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 363
SP + P +P +++ + F F +++A ++AD L +
Sbjct: 292 SPVMSTILAYFGP-----GQPLYLIFFALMIVFFAYFYTYNVAFKTDDVADNLKNQNGFV 346
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLII 422
P ++PGK T EYL + G L+ + +L LR ++ F G TSVLI+
Sbjct: 347 PGIRPGKKTAEYLEYVVTRILVLGSAYLAAVC----LLPEILRSQLAIPFYFGGTSVLIV 402
Query: 423 VGSIIELRRSYQAY 436
V ++ + Q++
Sbjct: 403 VSVTMDTIQQVQSH 416
>gi|456013292|gb|EMF46951.1| preprotein translocase secY subunit [Planococcus halocryophilus
Or1]
Length = 431
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 203/421 (48%), Gaps = 24/421 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI-PQDYLSFVSGSVDELGDFGAELKLSF 84
++IR ++F T ++++I R+G F+P+P D ++ D + V G ++ G GA S
Sbjct: 12 TDIRNKIFFTLLMLIIFRVGTFVPVPNVDASVLQATDQMGLV-GFLNTFGG-GALANFSI 69
Query: 85 FQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
+GI P I ASI++Q+L +VP + K+G G K+ + + ++ A ++A I
Sbjct: 70 LAMGIMPYITASIIVQLLQMDVVPKFAEWAKQGEVGRRKLAQFTRYFTIVLAFIQA-IGM 128
Query: 144 CYSLPYSIYAAS----HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
Y +Y S ++ +V A +L G + W+ + I+ G G G S+II GI
Sbjct: 129 SYGFN-QMYGGSLIQNDTISTYVVIAIVLTAGTAFLLWLGEQITAKGVGNGISIIIFAGI 187
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI----VTMWAVVVTEGCRKVKLQYYG 255
+ + ++ +Q + + P + ++ + + +T+ + V + RK+ +QY
Sbjct: 188 VAAIPGAINQLYAQQIQGAGDQLPINIAIMALLALAVVAITVLVIYVQQALRKIPIQY-- 245
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-PFWQHVKE 314
A + + ++P +N +G+ PV+ + P +AS G+ F + ++
Sbjct: 246 --AKRVAGRGQTASGQQTHLPLKVNAAGVIPVIFAVAFIITPQTIASFFGANAFTEAIQN 303
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
+ VG +Y + F + + + P+ ++D L K GA IP ++PGK T +
Sbjct: 304 TFDYTRPVGM--IIYVALIVAFTYFYAFIQVN--PENVSDNLKKQGAYIPGIRPGKNTQD 359
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
YLT + F G + L+I+A + + + + IG TS+LI+VG +E + +
Sbjct: 360 YLTSVLYRLTFVGAIFLAIIAVLPIFFIN-VANLPQSAQIGGTSLLIVVGVALETMKQLE 418
Query: 435 A 435
+
Sbjct: 419 S 419
>gi|153952881|ref|YP_001393646.1| preprotein translocase subunit SecY [Clostridium kluyveri DSM 555]
gi|219853546|ref|YP_002470668.1| hypothetical protein CKR_0203 [Clostridium kluyveri NBRC 12016]
gi|146345762|gb|EDK32298.1| SecY [Clostridium kluyveri DSM 555]
gi|219567270|dbj|BAH05254.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 426
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 205/418 (49%), Gaps = 25/418 (5%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
E+R+R+ T +++I R+G FI +PG D L+ ++GS LG + GA +
Sbjct: 13 ELRKRILFTLFMVIIFRVGNFIAVPGID-----TSKLTELTGSGSLLGFYDLLSGGAFSR 67
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV- 140
S F +G+ P I +SI+MQ+L VP L QL KEG +G +KI+ Y + S+ +++
Sbjct: 68 FSIFAMGVIPFINSSIIMQLLTVAVPRLEQLSKEGEEGRKKIQEYTRYASIPLGVVQGFS 127
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
I A S ++ + + M+ F + + + W+ D I+E G G G SLII V I+
Sbjct: 128 IYAIISRAGALVEPGNKLSIFMII-FTVTTASTFLMWLGDKITEHGIGNGISLIIFVNII 186
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
+ + + ML +L + + +G + V ++ + VV++ R++ +QY G A
Sbjct: 187 SRFPSAVSGML-KLQEVEIVNFVETIGFIAVIILLFVAVVVMSLSERRIPIQYAGKTNAG 245
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHV-KEILNP 318
+ +IP N+N + + ++ ++ FP + S F Q V +P
Sbjct: 246 RMYKGQ-----STHIPINVNGAAVIGIIFAISVMQFPMTIGQFWPNSAFAQFVTASAFSP 300
Query: 319 -ETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
+ S P +Y+ + FF + + ++ P+E+A+ +NK IP ++PG+ T Y+
Sbjct: 301 FKESNWQYPVLYFLLTIFFTWFYT--EVTLKPEEMAENMNKSSGFIPGIRPGEPTAIYIE 358
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
++ A GG I+A S + + Y +G G T +LIIV IE R Q+
Sbjct: 359 RVLARVAVLGGAFAGIIAISPILAETYTNF--KGIYFGGTGLLIIVNVAIETVRQLQS 414
>gi|343183574|gb|AEM01127.1| preprotein translocase subunit SecY [Criblamydia sequanensis]
Length = 456
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 217/454 (47%), Gaps = 48/454 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-----ELGDFGAELK 81
E+R+++ T +++ + RIG FIP+PG + + + + G + ++ GA +
Sbjct: 13 ELRQKILFTFLMLCVCRIGGFIPVPGINGEVALSYFRQAMGGGQNIFQMIDIFSGGAFSQ 72
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEAV 140
++ LG+ P I ASI+ Q+L PSL + +E D G KI +++ ++L++
Sbjct: 73 MTVVALGVVPYISASIITQLLVATWPSLQREIRENQDVGRRKINKITRLLTIILSVLQSG 132
Query: 141 IVACYSLPYSIYAASHSVKHVM-------------VTAFLLVCGAMTMSWICDTISESGF 187
+ A Y++ + ++ V + G M + WI + I+E G
Sbjct: 133 LFAKYAVQMNFARPGIITGELLDFQLFGMPWLFYLVVVATMTTGTMFLMWIGEQITEKGI 192
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVR----WWPFMLGLLGVFTIVTMWAVVVT 243
G G SLII +GIL+ + + QL S + +L L+GVF VT+ +++
Sbjct: 193 GNGMSLIITIGILSQLPSAMGMIFQQLNLDSQEPGQMNFASVLLLIGVFVFVTLATILII 252
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVE---PYIPFNINPSGMQPVLTTTYLLAFPSIL 300
+G R++ LQ+ AR EV+ YIP +N +G+ PV+ + LL FP+ +
Sbjct: 253 QGHRRIPLQH--------ARRVVGRKEVQGGASYIPLKVNYAGVIPVIFASSLLMFPTTI 304
Query: 301 ASILGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLN 357
S +G+ W V ++P+T +Y +Y + F F A P +IA +
Sbjct: 305 GSFIGAGNWVGMVASWMDPKTK------MYLIMYVMLIIFFTYFWTATQFHPDQIASDMK 358
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL---RRINEGFSI 414
K GA IP ++ G+ T EYL F G + L+++A I+ L + I+ F
Sbjct: 359 KNGAFIPGIRQGRPTQEYLETTMNRITFLGAVFLALIAILPMIVQKILIVPQTISYFF-- 416
Query: 415 GFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
G T++LI+VG +++ + +++ +M ++R
Sbjct: 417 GGTALLILVGVVLDTMKQVESHLLMKRYEGFMKR 450
>gi|302519640|ref|ZP_07271982.1| preprotein translocase, SecY subunit [Streptomyces sp. SPB78]
gi|333026531|ref|ZP_08454595.1| putative preprotein translocase subunit SecY [Streptomyces sp.
Tu6071]
gi|302428535|gb|EFL00351.1| preprotein translocase, SecY subunit [Streptomyces sp. SPB78]
gi|332746383|gb|EGJ76824.1| putative preprotein translocase subunit SecY [Streptomyces sp.
Tu6071]
Length = 437
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 212/438 (48%), Gaps = 30/438 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSG--SV 70
+L A +F ++R++L T +IVI R+G +P+PG + + + D + SG +
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVIYRLGTHVPIPGVNYKNVQTCIDQANTNSGLFGL 60
Query: 71 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
L GA L+++ F LGI P I +SI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNLFSGGALLQITIFALGILPYITSSIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYL 120
Query: 131 SLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDT 181
++ A+L+ + + +I+ S+ +V + G T+ W+ +
Sbjct: 121 TVALAVLQGTGLVATARSGAIFQGCSVAGDIVPDQSIFTTIVMVLTMTAGTATVMWLGEL 180
Query: 182 ISESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 239
+++ G G G S+++ V I G+ +L+ K L G + + +L V ++
Sbjct: 181 VTDRGIGNGMSILMFVSIAAGFPGSLWAIKKGGDLAGGWIEFGTVIL----VGLVMVALV 236
Query: 240 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V V + R++ +QY + + + YIP +N +G+ PV+ + LL P++
Sbjct: 237 VFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPAL 291
Query: 300 LASILGSPF-WQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLN 357
+ S W +++ L +TS +Y+ + FF F + I+ P+E+AD +
Sbjct: 292 IVQFTDSQASWATWIRDNL-ADTSAWPHVVLYFLLIVFFAFFY--VAISFNPEEVADNMK 348
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++ G+ T EYL+ + + G L L ++A T+ N F G T
Sbjct: 349 KYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTLALAGFGA-NSNFPFGGT 407
Query: 418 SVLIIVGSIIELRRSYQA 435
S+LIIVG +E + ++
Sbjct: 408 SILIIVGVGLETVKQIES 425
>gi|340751223|ref|ZP_08688046.1| preprotein translocase, SecY subunit [Fusobacterium mortiferum ATCC
9817]
gi|340562274|gb|EEO36790.2| preprotein translocase, SecY subunit [Fusobacterium mortiferum ATCC
9817]
Length = 412
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 204/423 (48%), Gaps = 32/423 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 81
E+R R+ T ++ +++R+G +IP PG D D L+ ++ D LG GA +
Sbjct: 5 ELRERIVFTLLMFLVARVGTYIPAPGVDV-----DRLATMTAQSDILGYINMFSGGAFKR 59
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I +SI+ +L I+P + +++KEG G KI + ++++G AI++A
Sbjct: 60 VSIFALGIVPYINSSIVFSLLAVIIPKIEEIQKEGESGRNKITQWTRYLTIGIAIIQAFG 119
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V C L + + T L G + + WI + IS G G G SL+I + +++
Sbjct: 120 V-CMWLQSVGLVTTPGTMFFLTTIVTLTAGTVFLMWIGEQISIKGIGNGVSLLIFLNVIS 178
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY--GFKLA 259
G + + + + GS P +L + +V V+ G RK+ + Y GF
Sbjct: 179 GGPSNVVQTIQSMRGSKF-LIPVLLLIALAGILVVAGIVIFQLGQRKIPIHYVGKGFNGR 237
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 319
++S YIP +N +G+ PV+ + ++ PS + + + S + +K L
Sbjct: 238 GGMGQNS-------YIPLKLNSAGVMPVIFASVVMMIPSAIVNAIPSEY--TIKTTLAMV 288
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLT 377
S + P VY IYA + F+ F A + P+++AD L + G IP ++PG T+EYL
Sbjct: 289 FS-QSHP-VYMIIYAVVIIFFSFFYTAIVFDPEKVADNLKQGGGTIPGIRPGTETVEYLE 346
Query: 378 KIQASTRF-WGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ TR WGG LA S + G T ++I+VG I+ + A+
Sbjct: 347 GV--VTRITWGGAFF--LAAISILPYAIFTSFGLPVFFGGTGIIIVVGVAIDTVQQINAH 402
Query: 437 NVM 439
VM
Sbjct: 403 LVM 405
>gi|383787020|ref|YP_005471589.1| protein translocase subunit secY/sec61 alpha [Fervidobacterium
pennivorans DSM 9078]
gi|383109867|gb|AFG35470.1| protein translocase subunit secY/sec61 alpha [Fervidobacterium
pennivorans DSM 9078]
Length = 428
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 220/433 (50%), Gaps = 35/433 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRR-----LIPQDYLSFVSGSVDELGDF---GA 78
E+R R+ T +++++ R+G ++P+PG + + L Q + ++G V D GA
Sbjct: 13 EVRDRVIFTFLMLLVFRLGIYVPVPGINIKAWGEALSKQG--TGLAGGVLSFYDVFTGGA 70
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
+ S F + ++P I ASI+MQ+L I+PSL +L KEG +G +K + Y +++G A L+
Sbjct: 71 FSRFSVFSMSVTPYINASIIMQLLASIIPSLKELLKEGEEGRKKFQHYTKNLTIGLAALQ 130
Query: 139 AVIVA-CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ +V+ + Y A + V+ LV G M + WI D I+E G G G S++I
Sbjct: 131 SFVVSFGLANSYQGIIAVNKWLFSFVSTVSLVAGTMFLLWIGDRITEKGIGNGVSILIFA 190
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
GI++ Y Y + L ++ W F++ + VF +V + + V + R++K++Y
Sbjct: 191 GIVSRYPA--YFRTAVLGNLNIFGWIFLIA-VAVFMVVAI--IYVQQAERRIKIEY---- 241
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 317
A+ Y+P +N SG+ P++ +++ P +A I G+ + + + +
Sbjct: 242 -ATRMVGRRIYGGTSTYLPIKVNHSGVIPIIFAWAIVSIPEAIAQITGAQWAIKLFSMQS 300
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEY 375
P + IYA +F F F + PK+I++ + + G IP ++ GK T EY
Sbjct: 301 P---------LMIIIYALLIFFFTYFYSVVVIDPKDISENIKRYGGFIPGIRAGKPTEEY 351
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
+T + F G + L ++ +++ + R+N +G TS LI VG +++ + +A
Sbjct: 352 ITYVLNRVTFIGAIFLVGISLLPYLVEG-ITRVN--IWLGGTSALIAVGVALDIAQQIEA 408
Query: 436 YNVMPSLSKALRR 448
+ +M + +++
Sbjct: 409 HLIMRNYEGFVKK 421
>gi|167767783|ref|ZP_02439836.1| hypothetical protein CLOSS21_02318 [Clostridium sp. SS2/1]
gi|167710522|gb|EDS21101.1| preprotein translocase, SecY subunit [Clostridium sp. SS2/1]
Length = 438
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 217/440 (49%), Gaps = 35/440 (7%)
Query: 16 LNNAAESFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
++NA S FK+ ++R++L T +++++ R G +P+P D I S + S L
Sbjct: 1 MSNAVVSAFKNKQLRKKLLFTTLILIVVRFGSQLPIPEIDSAQISAYLKSTLGDSFSLLN 60
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
F G+ +++S F L ++P I +SI+MQ++ ++P+L +++K+G DG +++ ++++
Sbjct: 61 SFTGGSFMQMSVFALSVTPYITSSIIMQLMTIVIPALEEMQKDGEDGRKRMAKITRYVTV 120
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
AI+E +A ++ ++ L GA+ + W+ + I+ESG G G S
Sbjct: 121 VLAIIEGAGLAIGFANQGALGTDYTTFTIVTMIIALTAGAVLVMWLGERITESGIGNGIS 180
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRKVK 250
+I+ V I++G + +Q + + G ++GV V ++ +V+++ R +
Sbjct: 181 IILLVNIVSGMPGDFTSLYNQFMKGKQIGPALIAGCVIVGVVLAVVVFVIVLSDAERHIP 240
Query: 251 LQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
+QY G KL + IP +N +G+ P++ + ++ FP +L ++L
Sbjct: 241 VQYSKKMQGRKLVGGQQSK---------IPLKVNTAGVIPIIFASSIMQFPIMLQNVLK- 290
Query: 307 PFWQHVKEILNPETSVGARPW---------VYYTIYAFFVFLFNIF--DIANLPKEIADY 355
+++ I TS+ + W + IY V LF F I P EI++
Sbjct: 291 --YENNGFIGKALTSLNSSTWFDASHPKRSIGLLIYIVLVVLFAYFYTSITFNPLEISNN 348
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
+ K G IP ++PGK T++YL KI F G L+I+A + S G
Sbjct: 349 MKKQGGFIPGIRPGKPTVDYLNKILKYIIFIGAAGLTIVAVVPFFFNGVF---GASVSFG 405
Query: 416 FTSVLIIVGSIIELRRSYQA 435
TS++IIVG I+E + Q+
Sbjct: 406 GTSIIIIVGVILETIKQIQS 425
>gi|333382880|ref|ZP_08474545.1| preprotein translocase, SecY subunit [Dysgonomonas gadei ATCC
BAA-286]
gi|332828210|gb|EGK00922.1| preprotein translocase, SecY subunit [Dysgonomonas gadei ATCC
BAA-286]
Length = 438
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 198/426 (46%), Gaps = 35/426 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
++R+RL +T +VI R G I LPG D + G +D L F GA S
Sbjct: 14 EDLRKRLMITFFFVVIYRFGVHIVLPGVDPEALNALQAKTSGGILDILNMFSGGAFANAS 73
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI+MQ+L VP +L++EG G K+ Y ++++ + +
Sbjct: 74 IFALGIMPYISASIVMQLLGMAVPYFQKLQREGESGRTKMNQYTRYLTVAILLFQG---P 130
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
Y L AA S + ++ + +L G+M + W+ + I++ G G G S II VGI+
Sbjct: 131 AYLLGALGAAAPTSWEFLIPSTIILAGGSMFVLWLGERITDKGIGNGVSFIILVGIIARL 190
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFKLA 259
L S L S L + ++ A+++ +G R++ +QY G K
Sbjct: 191 PHALIGEFSSRLASQGGGLVMFLAEIVFLLLIICGAILLVQGTRRIPVQYAKRVVGNKQY 250
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA--SILGSPFWQHVKEILN 317
AR+ YIP +N + + P++ ++ P +A S FW +
Sbjct: 251 GGARQ---------YIPLKVNAANVMPIIFAQAIMFVPISIAGFSTEKGGFWGSFMD--- 298
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEY 375
TSV Y ++AF + F F A P ++AD L + IP +KPGK T +Y
Sbjct: 299 -HTSV-----AYNVVFAFLIIAFTWFYTAVTINPVQMADELKRNNGFIPGIKPGKKTADY 352
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--IGFTSVLIIVGSIIELRRSY 433
+ I + F G L L+++A ++ ++ FS G TS+LI+VG +++ +
Sbjct: 353 IDSIMSRITFPGSLFLAMVAILPAFASYF--GVSREFSQFFGGTSLLILVGVVLDTLQQI 410
Query: 434 QAYNVM 439
+++ +M
Sbjct: 411 ESHLLM 416
>gi|297201749|ref|ZP_06919146.1| preprotein translocase, SecY subunit [Streptomyces sviceus ATCC
29083]
gi|197710876|gb|EDY54910.1| preprotein translocase, SecY subunit [Streptomyces sviceus ATCC
29083]
Length = 437
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 213/439 (48%), Gaps = 32/439 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T +IV+ R+G +P+PG + + + Q+ + SG+ G
Sbjct: 1 MLTAFARAFRTPDLRKKLLFTLAIIVVYRVGTHVPIPGVNYKSV-QECVDQASGNQGLFG 59
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 130 ISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICD 180
+++ AIL+ + + ++++ ++ +V + G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGALFSGCTVASSIVPDRAIFTTIVMVITMTAGTAVVMWLGE 179
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I++ G G G S+++ + I + L+ + Q G+ W ++ V ++ V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKKQ--GTLADGWIEFGTVIAVGLVMVGLVV 237
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALV 292
Query: 301 ASI-LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYL 356
A G+ W K + + G P +Y ++Y + F F +A N P+E+AD +
Sbjct: 293 AQFSSGTSSW---KTWIEANLTKGDHP-IYISLYFLLIVFFAFFYVAISFN-PEEVADNM 347
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++ G+ T EYL+ + + G L L ++A T+ ++ F G
Sbjct: 348 KKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALVGFGA-SQNFPFGG 406
Query: 417 TSVLIIVGSIIELRRSYQA 435
TS+LIIVG +E + ++
Sbjct: 407 TSILIIVGVGLETVKQIES 425
>gi|410610657|ref|ZP_11321771.1| preprotein translocase subunit SecY [Glaciecola psychrophila 170]
gi|410634578|ref|ZP_11345212.1| preprotein translocase subunit SecY [Glaciecola arctica BSs20135]
gi|410145782|dbj|GAC22079.1| preprotein translocase subunit SecY [Glaciecola arctica BSs20135]
gi|410169793|dbj|GAC35660.1| preprotein translocase subunit SecY [Glaciecola psychrophila 170]
Length = 439
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 212/435 (48%), Gaps = 30/435 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++ RL I++ R+G ++P+PG D ++ Q + G++ E+ + GA +
Sbjct: 15 SELKSRLLFVLGAIIVFRLGSYVPIPGIDAAVLAQLFEQ-QKGTIVEMFNMFSGGALERA 73
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q++ H+ P +++L+KEG G KI Y + +L A +AV +
Sbjct: 74 SVLALGIMPYITASIIIQLMSHMHPPMMELKKEGEAGRRKISQYTRYFTLVLASFQAVGI 133
Query: 143 ACYSLPYSIYA-ASHSVKHVMVTAFL-LVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A +LP I + TA++ LV G M + W+ + I+E G G G S++I GI+
Sbjct: 134 AT-NLPNLIQGLVINPGFGFYFTAWISLVTGTMFLMWLGEQITERGIGNGISILIFAGIV 192
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 259
+G L + Q + L L+GV I VT + V V G R++ + Y A
Sbjct: 193 SGLPSALGNVAEQARQGELNL--LFLMLVGVIIIAVTYFVVFVERGQRRIVVNY-----A 245
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---SPFW-QHVKEI 315
+ ++P +N +G+ P + + ++ FP +A+ G S W Q V
Sbjct: 246 KRQQGRKVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIANWFGQNESLSWLQDVALQ 305
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
L+P +P +Y +YA + F F A + P+E AD L K GA +P ++PG+ T
Sbjct: 306 LSP-----GQP-LYVMLYAATIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTS 359
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
+Y+ K+ G L ++ + + + L N F G TS+LI+V I++
Sbjct: 360 KYVDKVMTRLTLAGALYITFIC---LVPEFMLIAWNVPFYFGGTSLLIMVVVIMDFMAQV 416
Query: 434 QAYNVMPSLSKALRR 448
Q + + L++
Sbjct: 417 QTHLMSNQYESVLKK 431
>gi|399516352|ref|ZP_10757959.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Leuconostoc
pseudomesenteroides 4882]
gi|398648796|emb|CCJ65986.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Leuconostoc
pseudomesenteroides 4882]
Length = 444
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 219/440 (49%), Gaps = 43/440 (9%)
Query: 12 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 71
LS++ N E +IR++L T +++ + RIG I +PG + + D + SG ++
Sbjct: 2 LSTLFNAVREK----DIRKKLGWTFLILFVYRIGTHITVPGVNPAAMS-DMAN--SGLMN 54
Query: 72 ELGDF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIW 128
L F G + S F +G+SP + A I++Q+L IVP V+ K+G G K+ +
Sbjct: 55 ILNIFSGGGLMNYSLFAMGVSPYVTAQIVVQLLQLDIVPRFVEWSKQGEVGRRKLNNATR 114
Query: 129 WISLGFAILEAV-IVACYSL--PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 185
W++L A +++V I A ++ Y + + +++V +V ++ G W+ + I+E
Sbjct: 115 WLTLVLAFVQSVGITAGFNSLSSYGLVSQTNNVMSFIVIGSVMTIGTFFAMWLGEMITEK 174
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLL-----GSSVRWWPFMLGLLGVFTIVTMWAV 240
G G G S+II GI+ E LY++ + + G + W FM+ LL +V +
Sbjct: 175 GLGNGVSMIIFAGIIAQAPEGLYEIFKENILQAGNGELLNGWVFMIVLLVAMILVVAFTT 234
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVL--------TTTY 292
EG R++++QY SA S E Y+P +N SG+ PV+ T
Sbjct: 235 WSYEGTRRLQMQY----TRSATSYGS-----EAYLPLKVNVSGVIPVIFASSFISTPQTV 285
Query: 293 LLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEI 352
LLAF AS + ++Q +++I + T GA + YT+ F F N P+++
Sbjct: 286 LLAFQDKYAS---AQWYQVMQQIFSMTTLPGA---ILYTVLIVIFTYFYAFVQVN-PEKL 338
Query: 353 ADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGF 412
A+ L K GA I V+PG T +++K+ + F G + L ++A I + +NE
Sbjct: 339 AENLQKQGAYIVGVRPGDQTKAFVSKLLLNLSFVGSIFLGVVALVPLIASD-VWGLNEKI 397
Query: 413 SIGFTSVLIIVGSIIELRRS 432
+G TS+LI +G ++L R
Sbjct: 398 GLGGTSLLISIGVALDLIRQ 417
>gi|239990050|ref|ZP_04710714.1| preprotein translocase subunit SecY [Streptomyces roseosporus NRRL
11379]
gi|291447064|ref|ZP_06586454.1| preprotein translocase subunit secY [Streptomyces roseosporus NRRL
15998]
gi|291350011|gb|EFE76915.1| preprotein translocase subunit secY [Streptomyces roseosporus NRRL
15998]
Length = 437
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 202/436 (46%), Gaps = 36/436 (8%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
A +F ++R++L T +IVI R G IP PG D + Q SG + L
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVIYRFGAHIPAPGVDYAKVQQCIDQADSGGLLGLMQMFSG 65
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ A+
Sbjct: 66 GALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALAV 125
Query: 137 LEAVIVACYSLPYSIY---------AASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
L+ + + +++ A SV ++ + G + W+ + I++ G
Sbjct: 126 LQGTGLVATARSGALFQNCSVGDQIVADKSVFTTIIMVLTMTAGTAAVMWLGELITDRGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKML-SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G S+++ + I + L+ + S L W F +L F +V + V V +
Sbjct: 186 GNGMSILMFISIAATFPGALWAIKESGKLADG--WIEFGTVILIGFVMVGL-VVFVEQAQ 242
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA----S 302
R++ +QY + + + YIP +N +G+ PV+ + LL P+++ S
Sbjct: 243 RRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIVQFSNS 297
Query: 303 ILGSPFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKM 359
G W + G P+ Y+ + FF F + I+ P E+AD + K
Sbjct: 298 QAGWATW------IQDNFVTGDHPYYIATYFVLIVFFAFFY--VAISFNPDEVADNMKKY 349
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G TS+
Sbjct: 350 GGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGGANQNFPFGGTSI 409
Query: 420 LIIVGSIIELRRSYQA 435
LIIVG +E + ++
Sbjct: 410 LIIVGVGLETVKQIES 425
>gi|317509244|ref|ZP_07966865.1| eubacterial secY protein [Segniliparus rugosus ATCC BAA-974]
gi|316252454|gb|EFV11903.1| eubacterial secY protein [Segniliparus rugosus ATCC BAA-974]
Length = 438
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 206/420 (49%), Gaps = 42/420 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG------SVDELGDFGAEL 80
++RR++ ++ ++V+ R+G +P PG + + + + G S+ L GA L
Sbjct: 14 DLRRKILISIGMVVLYRLGATLPSPGVNYKNVHECLDQVSKGDSQGVYSLINLFSGGALL 73
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE-A 139
+LS F +G+ P I ASI+ Q+L ++P QLRKEG G K+ Y ++++ A+L+ +
Sbjct: 74 QLSVFAIGVVPYITASIITQLLTVVIPRFEQLRKEGQSGQTKMTQYTRYLAVALALLQSS 133
Query: 140 VIVACYSLPYSIYAAS------HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
IVA + + + S H + ++V ++ GA + W + ISE G G G SL
Sbjct: 134 AIVALANRRQLLSSCSKDILDEHELFQLIVIVLVMTAGATLVMWFGEIISERGIGNGMSL 193
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQ 252
+I GI ++L G + L+ V +V M +V+ + +G R++ +Q
Sbjct: 194 LIFSGIAARIPAEGKQILDSRGG-------VVFALVCVAALVIMASVIFIEQGQRRIPVQ 246
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL---GSPFW 309
Y + S Y+P +N +G+ PV+ + LL P+++ +L G+ W
Sbjct: 247 YAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYVPNLITQLLSKNGTSGW 301
Query: 310 QHVKE--ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVK 367
Q + +LNP ++V VY+++ FF F + I P+E A+ + K G IP ++
Sbjct: 302 QRWMQNYLLNPSSAV--YIGVYFSLIVFFTFFY--VAITFNPQERAEEMKKYGGFIPGIR 357
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEG----FSIGFTSVLIIV 423
PG T EYL + G + L I+A + + +L+ N G G T+VLI+V
Sbjct: 358 PGAPTAEYLNFVLTRITLPGSIYLGIIA---VLPNLFLQIGNSGGAQNLPFGGTAVLILV 414
>gi|225571573|ref|ZP_03780569.1| hypothetical protein CLOHYLEM_07671 [Clostridium hylemonae DSM
15053]
gi|225159650|gb|EEG72269.1| hypothetical protein CLOHYLEM_07671 [Clostridium hylemonae DSM
15053]
Length = 438
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 214/435 (49%), Gaps = 36/435 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---G 77
++F +IR+++ T +++++ RIG +P PG D I +D+ + +G L + G
Sbjct: 7 KAFQIKDIRKKIGYTFLMLIVIRIGSELPTPGVDPSYI-KDFFAQNTGEAFNLFNAFTGG 65
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
+ ++S F L I+P I +SI+MQ+L +P L +++KEG DG +KI + ++++ A++
Sbjct: 66 SFEQMSVFALSITPYITSSIIMQLLTIAIPKLEEMQKEGEDGRKKIVAITRYLTVALALI 125
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
E+ +A ++ + + L G+ + WI + I+E G G G S+++ +
Sbjct: 126 ESTAMAV-GFGRRGLLVEYNFVNAAIVVLTLTAGSALLMWIGERITEKGVGNGISIVLVI 184
Query: 198 GILTGYTETLYKMLSQLL-GSSVRWWPFMLGLLGVFTIV---TMWAVVVTEGCRKVKLQY 253
I++ + + Q + G S+ L ++ +F I+ ++ +V+ +G R++ +QY
Sbjct: 185 NIISRIPNDMSTLFEQFVKGKSLASGG--LAVVIIFAIILALVVFVIVLQDGERRIAVQY 242
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV- 312
+ +IP IN +G+ P++ + L+ FP ++AS LG +
Sbjct: 243 -----SQKVVGRKTFGGQSTHIPLKINTAGVIPIIFASSLMQFPIVIASFLGKDGGTGIG 297
Query: 313 KEIL---------NPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
EIL NPE W VY + FF + + I P EIA+ + K G
Sbjct: 298 SEILRGMNQGNWCNPEHL--KYSWGLLVYIILTVFFAYFYT--SITFNPLEIANNMKKSG 353
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
IP ++PGK T+EYLT+I F G L ++ + +L S G TS++
Sbjct: 354 GFIPGIRPGKPTVEYLTRILNYIIFVGACGLVLIQIVPIFFNGWL---GAKVSFGGTSLI 410
Query: 421 IIVGSIIELRRSYQA 435
IIV ++E + ++
Sbjct: 411 IIVSVVLETLKQIES 425
>gi|342733038|ref|YP_004771877.1| preprotein translocase subunit SecY [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384456406|ref|YP_005669004.1| preprotein translocase subunit SecY [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417959320|ref|ZP_12602155.1| Preprotein translocase subunit SecY [Candidatus Arthromitus sp.
SFB-1]
gi|417965151|ref|ZP_12606742.1| Preprotein translocase subunit secY [Candidatus Arthromitus sp.
SFB-4]
gi|417968137|ref|ZP_12609180.1| Preprotein translocase subunit secY [Candidatus Arthromitus sp.
SFB-co]
gi|418015555|ref|ZP_12655120.1| preprotein translocase subunit SecY [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418373291|ref|ZP_12965382.1| Preprotein translocase subunit secY [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342330493|dbj|BAK57135.1| preprotein translocase secY subunit [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345505890|gb|EGX28184.1| preprotein translocase subunit SecY [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984752|dbj|BAK80428.1| preprotein translocase, SecY subunit [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380333691|gb|EIA24227.1| Preprotein translocase subunit SecY [Candidatus Arthromitus sp.
SFB-1]
gi|380338777|gb|EIA27635.1| Preprotein translocase subunit secY [Candidatus Arthromitus sp.
SFB-4]
gi|380340243|gb|EIA28864.1| Preprotein translocase subunit secY [Candidatus Arthromitus sp.
SFB-co]
gi|380341680|gb|EIA30154.1| Preprotein translocase subunit secY [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 424
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 213/427 (49%), Gaps = 24/427 (5%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L NA F ++R+R+F T ++++ R+G FIP+PG + + Q + + G D +
Sbjct: 4 ILGNA---FKVKDLRKRIFFTLFIVIVFRLGNFIPVPGVNTESLKQLTSTGLFGFYDLIS 60
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA + S F LG+ P I +SI++Q+L +P QL KEG +G +K+++ ++S+
Sbjct: 61 G-GALERFSIFALGVVPYINSSIIVQLLSMSIPKFEQLSKEGEEGRKKLQNITRYLSIVL 119
Query: 135 AILEAVIVACYSLPYSIYA-ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
+ ++A Y L + A ++S+ ++ F LV ++ + WI D +S G G G SL
Sbjct: 120 SFIQA--YGSYFLILNAGAITNNSIFSMIFVVFTLVAASVFLVWIGDQVSLHGIGNGVSL 177
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWP---FMLGLLGVFTIVTMWAVVVTEGCRKVK 250
I V I++ + ++ + V + F+L +G+ +W + +T R++
Sbjct: 178 FIFVNIVSRFPNMFLQIGALNKSGEVGFIESIIFILVAIGLL----IWTIYMTLAERRIT 233
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
+QY G +L+ + + + + +IPF+I S + ++ T +L FP+ + + W
Sbjct: 234 VQYAGKQLSGSNKNN------KAHIPFSITGSAVIAIIFATSVLQFPATIGTFFSPDSWI 287
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKP 368
+ + + +Y ++A + F F + P E+A+ +NK IP ++P
Sbjct: 288 NRILVNGSYSPFRINSALYTILFALLIIFFTWFYTQVTYKPDEMAENMNKSAGFIPGIRP 347
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G++T +Y+ I GG+ ++LA +D + +G G T +LI++ + ++
Sbjct: 348 GESTAKYIENILDKISIIGGIFGAMLALFPIFIDLFTPF--KGLQFGGTMLLILISTSVD 405
Query: 429 LRRSYQA 435
R ++
Sbjct: 406 TMRQIES 412
>gi|297242950|ref|ZP_06926888.1| preprotein translocase subunit SecY [Gardnerella vaginalis AMD]
gi|298253057|ref|ZP_06976849.1| preprotein translocase subunit SecY [Gardnerella vaginalis 5-1]
gi|296889161|gb|EFH27895.1| preprotein translocase subunit SecY [Gardnerella vaginalis AMD]
gi|297532452|gb|EFH71338.1| preprotein translocase subunit SecY [Gardnerella vaginalis 5-1]
Length = 425
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 201/413 (48%), Gaps = 25/413 (6%)
Query: 38 LIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELKLSFFQLGISPQ 92
+I+I RIG FIP+PG D +++ + S S + +G G+ L+LS F LG+ P
Sbjct: 1 MIIIYRIGSFIPIPGVDYKVVHACTVKLASSSENFIGLVNLFSGGSLLQLSIFALGVMPY 60
Query: 93 IVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIY 152
I ASI++Q+L ++P L KEG G K+ Y ++++G AIL++ + + +++
Sbjct: 61 ITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGLAILQSTTILVTARTGALF 120
Query: 153 A--------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 204
S+ ++V ++ G + W+ + I++ G GQG S++I + I +G+
Sbjct: 121 NYQCGNNIIPDGSMWSLIVMVLIMTGGTGLIMWMAELITDKGIGQGMSVLIFMSICSGFL 180
Query: 205 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE 264
L+++ GS+ W F + + GV ++ ++ V R++ +QY +
Sbjct: 181 PKLWEIGWGTNGSNGDWNKFAI-VGGVLIVILIFVDFVELAQRRIPVQYTRRMIGRKMYG 239
Query: 265 DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-SPFWQHVKEILNPETSVG 323
S Y+P +N SG+ P + + +LA P+++A S W + E N S
Sbjct: 240 GS-----STYLPLKVNMSGVIPPIFASSILAVPTLIAQFGDKSKAWVNWIE-ANLANSTS 293
Query: 324 ARPWVYYTIY-AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQAS 382
A +YT+ FF F + +I P E AD + + G IP ++ G AT YL+ +
Sbjct: 294 AWYIAFYTVMIVFFCFFYT--EITFNPDETADNMKEYGGFIPGIRAGSATSHYLSYVMNR 351
Query: 383 TRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
G + L +A T+L L +N G T++LII G ++ R +A
Sbjct: 352 LNTVGAIYLLFVALIPTVLIMAL-HLNTKLPFGGTTILIIAGVGLDTLRQAKA 403
>gi|410479106|ref|YP_006766743.1| preprotein translocase subunit SecY [Leptospirillum ferriphilum
ML-04]
gi|424867747|ref|ZP_18291527.1| Preprotein translocase subunit (SecY) [Leptospirillum sp. Group II
'C75']
gi|124514423|gb|EAY55936.1| Preprotein translocase subunit (SecY) [Leptospirillum rubarum]
gi|387221801|gb|EIJ76314.1| Preprotein translocase subunit (SecY) [Leptospirillum sp. Group II
'C75']
gi|406774358|gb|AFS53783.1| preprotein translocase subunit SecY [Leptospirillum ferriphilum
ML-04]
Length = 437
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 212/432 (49%), Gaps = 29/432 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E+R+R+ T ++ + RIG +IP PG + + Q +L G++ D GA +L+
Sbjct: 17 ELRQRILFTIGMLAVYRIGAYIPTPGVNGNALSQ-FLHQNGGALIGFFDMFSGGALSRLT 75
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA--VI 141
F LGI P I ASI++Q+L + P+L + KEG G + I Y ++++ A++++ +
Sbjct: 76 IFALGIMPYISASIILQLLTVVHPTLQAMAKEGERGRKIITRYTRYLTVLIALVQSFGIA 135
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
+ + + + L + WI + I+E G G G SLII GI+
Sbjct: 136 LGLEGMNNGQFVPHPGWSFRFIVVITLTAATTFVMWIGEQITERGVGNGISLIIFSGIIA 195
Query: 202 GYTETL---YKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
+ YK+ +Q + + + ++ VF IV+ V + RK+ +QY
Sbjct: 196 RLPAAIINTYKLYNQ---GEISGFLILALVVMVFLIVSS-IVFIETARRKIPIQY----- 246
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
A + + +IPF IN +G+ P + + L++FP+I+A + P+ Q + L+P
Sbjct: 247 AKRLVGNKMMGGQSTHIPFKINTAGVIPPIFASSLISFPAIIAGFVSVPWIQSFGKSLSP 306
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYL 376
+ + Y +Y + F F A + P +IA+ + K G IP V+PG+ T+EYL
Sbjct: 307 GS------FSYTGLYVLLIVFFCFFYTAVVLNPTDIAENMQKYGGYIPGVRPGQKTVEYL 360
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
++ F G L LSI+ +L + +++ F G TS+LI++G ++ + ++Y
Sbjct: 361 YRVMNRITFVGALYLSIVCVIPELLIY---QLHVPFYFGGTSLLIVIGVSLDTAQQIESY 417
Query: 437 NVMPSLSKALRR 448
+ + L++
Sbjct: 418 MMSRNYEGILKK 429
>gi|416051263|ref|ZP_11577361.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347993281|gb|EGY34655.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 441
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 207/434 (47%), Gaps = 28/434 (6%)
Query: 26 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
SE++ RL FV LIV RIG FIP+PG D ++ Q +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + + Q + +L + + VT + V V G R++K++Y A
Sbjct: 195 AGLPAAIGQTIEQARLGQMHLLVLLL-IAVIVLAVTYFVVFVERGQRRIKVEY-----AK 248
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 316
+ + ++P +N +G+ P + + ++ FP+ L +G + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSILL 308
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
+P +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 309 HP-----GQP-LYLVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSR 362
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ KI GGL ++ + I+ N F G TS+LI+V I++ Q
Sbjct: 363 YIDKIMTRLTLIGGLYVTFVCLVPYIMTSAW---NVQFYFGGTSLLIVVVVIMDFIVQIQ 419
Query: 435 AYNVMPSLSKALRR 448
++ + AL++
Sbjct: 420 SHLMSTRYESALKK 433
>gi|170289163|ref|YP_001739401.1| preprotein translocase subunit SecY [Thermotoga sp. RQ2]
gi|170176666|gb|ACB09718.1| preprotein translocase, SecY subunit [Thermotoga sp. RQ2]
Length = 431
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 220/441 (49%), Gaps = 47/441 (10%)
Query: 18 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSG 68
A ++ FK E+R R+ T + +++ R+G +IP+PG + RR+ ++ +
Sbjct: 3 QAFKNAFKIPELRDRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILS 62
Query: 69 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
D GA + S F + ++P I ASI++Q+L ++PSL ++ +EG +G K Y
Sbjct: 63 FYDVFTG-GALSQFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRRKFAKYTR 121
Query: 129 WISLGFAILEAVIVA---CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 185
++L +A V+ S P I + ++ +++ ++ G M + W+ + I+E
Sbjct: 122 RLTLLIGGFQAFFVSFSLARSNPDMIAPGVNVLQFTVLSTMSMLAGTMFLLWLGERITEK 181
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTE 244
G G G S++I GI+ Y + + + L G ++ W F++ + ++T++ ++ V +
Sbjct: 182 GIGNGISILIFAGIVARYPSYIRR--AYLGGLNLLEWIFLIAV----ALITIFGIILVQQ 235
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
R+V +QY A Y+P +N G+ P++ + +++ PS +ASI
Sbjct: 236 AERRVTIQY-----ARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASIT 290
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFN------IFDIANLPKEIADYLNK 358
+ + +K + A ++Y IY VF F IFD P+EI++ + K
Sbjct: 291 NN---ETLKSLFR------AGGFLYLLIYGLLVFFFTYFYSVVIFD----PREISENIQK 337
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
G IP ++PG++T +YL ++ F GG+ L ++A ++ + ++N IG TS
Sbjct: 338 YGGYIPGLRPGRSTEQYLHRVLNRVTFIGGVFLVVIALLPYLIQGAI-KVN--VWIGGTS 394
Query: 419 VLIIVGSIIELRRSYQAYNVM 439
LI VG +++ + + + VM
Sbjct: 395 ALIAVGVALDIIQQMETHMVM 415
>gi|254303400|ref|ZP_04970758.1| protein translocase SecY [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323592|gb|EDK88842.1| protein translocase SecY [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 426
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 213/434 (49%), Gaps = 33/434 (7%)
Query: 17 NNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG- 74
N+ S K E+R R+ T ++ +++R+G IP PG D D LS ++ D L
Sbjct: 8 NSRLSSIVKIPELRERIIFTLLMFLVARVGTLIPAPGVDV-----DRLSSMASQSDVLSY 62
Query: 75 ----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
GA ++S F LGI P I ASI++ +L I+P L +++KEG G +I + ++
Sbjct: 63 INMFSGGAFTRISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYL 122
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
++ AI++ V C L + + + T L G + + W+ + IS G G G
Sbjct: 123 TIALAIIQGTGV-CLWLQSVGLIYNPGLSFFVRTVTTLTAGTVFLMWVGEQISIKGIGNG 181
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKV 249
SLII + +++ ++ + + + G+ ++ +L L+ VT+ +V+ + G RK+
Sbjct: 182 VSLIIFLNVISRAPSSVIQTIQTMQGN--KFLIPLLVLVAFLGTVTIAGIVLFQLGQRKI 239
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 309
+ Y G S YIP +N +G+ PV+ + + P ++ + L P
Sbjct: 240 PIHYVGKGFTSKGGMGQ-----NSYIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PST 292
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVK 367
+K L+ G VY +YA + F+ F A + P+++A+ L + G IP ++
Sbjct: 293 LSIKTTLS--IIFGQNHPVYMILYALVIMFFSFFYTALVFDPEKVAENLKQGGGTIPGIR 350
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGS 425
PG+ T+EYL + + + GG+ L+I++ + Y+ + G + G T ++I+VG
Sbjct: 351 PGEETVEYLEGVASRITWGGGIFLAIIS-----ILPYVIFTSMGLPVYFGGTGIIIVVGV 405
Query: 426 IIELRRSYQAYNVM 439
++ + A+ VM
Sbjct: 406 ALDTIQQIDAHLVM 419
>gi|455651242|gb|EMF29988.1| preprotein translocase subunit SecY [Streptomyces gancidicus BKS
13-15]
Length = 437
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 213/438 (48%), Gaps = 30/438 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDE 72
+L A +F ++R++L T +IV+ R+G IP+PG D R + D G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVVYRVGTHIPIPGVDYRNVQTCIDAAQANQGLFGL 60
Query: 73 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ F GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNMFSGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYL 120
Query: 131 SLGFAILEAVIVACYSLPYSIY----AASHSV--KHVMVTAFLLV---CGAMTMSWICDT 181
++ AIL+ + + +++ AS V + + VT +++ G + W+ +
Sbjct: 121 TVALAILQGTGLVATARSGALFQGCPVASQIVPDQSIFVTITMVITMTAGTAVVMWLGEL 180
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
I++ G G G S+++ + I + L+ + Q GS W ++ V ++ V
Sbjct: 181 ITDRGIGNGMSILMFISIAATFPSALWAIKEQ--GSLADGWIEFGTVIAVGLVMVGLVVF 238
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++A
Sbjct: 239 VEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIA 293
Query: 302 SI-LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLN 357
G+ W K + G P +Y T+Y + F F +A N P+E+AD +
Sbjct: 294 QFSSGTSGW---KTWIEAHLVRGDHP-IYVTLYFLLIVFFAFFYVAISFN-PEEVADNMK 348
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G T
Sbjct: 349 KYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALVGFGA-NQNFPFGGT 407
Query: 418 SVLIIVGSIIELRRSYQA 435
S+LIIVG +E + ++
Sbjct: 408 SILIIVGVGLETVKQIES 425
>gi|227879263|ref|ZP_03997133.1| preprotein translocase subunit SecY [Lactobacillus crispatus
JV-V01]
gi|256849163|ref|ZP_05554596.1| translocase [Lactobacillus crispatus MV-1A-US]
gi|295692180|ref|YP_003600790.1| preprotein translocase secy subunit [Lactobacillus crispatus ST1]
gi|227861157|gb|EEJ68806.1| preprotein translocase subunit SecY [Lactobacillus crispatus
JV-V01]
gi|256713939|gb|EEU28927.1| translocase [Lactobacillus crispatus MV-1A-US]
gi|295030286|emb|CBL49765.1| Preprotein translocase secY subunit [Lactobacillus crispatus ST1]
Length = 431
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 214/430 (49%), Gaps = 27/430 (6%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
S L NA F EIR +L+ T ++++ RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKLYFTLFILLLYRIGANITVPGVNAKAITQVAQTGLVPMLDTV 59
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLAL 118
Query: 133 GFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFIQSIGITLGFNALTQMGLVKNQTPQTYIEIAIVMTAGTMLLTWLGDEITDKGLGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 245
S+II GI+ L+++ + + +S RW F + ++ IVT + V +
Sbjct: 179 ISVIIFAGIIARLPSGLWQIYKEEIINNSASDRWQGILFFIAVIVAILIVTQFVTWVEQA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASIL 304
R++ +QY + ++ E ++P +N SG+ PV+ + + P +IL +
Sbjct: 239 DRRIPIQY---------TRRATMSGSESFLPLKVNVSGVIPVIFASSFIVTPATILMAFQ 289
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGAR 362
+ Q +++N S+ P V IY + LF F + P+++A+ L K GA
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGV--IIYTLLIILFTFFYAFVQVNPEKLAENLQKQGAY 347
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP+V PGK T +Y++K+ G L L ++A + ++ + +G TS+LI+
Sbjct: 348 IPSVWPGKDTQDYISKMLMKLSTVGSLFLGLVALLPQLATNFW-NLPSSIGLGGTSLLIV 406
Query: 423 VGSIIELRRS 432
+G ++EL R
Sbjct: 407 IGVVLELSRQ 416
>gi|392413529|ref|YP_006450136.1| protein translocase subunit secY/sec61 alpha [Desulfomonile tiedjei
DSM 6799]
gi|390626665|gb|AFM27872.1| protein translocase subunit secY/sec61 alpha [Desulfomonile tiedjei
DSM 6799]
Length = 430
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 207/436 (47%), Gaps = 54/436 (12%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E++RR+ T +++ + R+G IP+PG + + +D+ S ++ + D GA S
Sbjct: 13 ELKRRVIFTLLMLFVYRLGVHIPVPGINTAAL-RDFFGKYSQTLFGVIDMFTGGAMENFS 71
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q+L +VP L +L KEG G +KI Y + ++ A+++ + ++
Sbjct: 72 VFSLGIMPYISASIILQLLTVVVPHLERLSKEGEAGRKKITQYTRYGTVVLALIQGLGIS 131
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLV------CGAMTMSWICDTISESGFGQGSSLIICV 197
A S + ++ TAF+L+ G + W+ + ++E G G G SLII
Sbjct: 132 VG------LAKSEGMVYMSPTAFVLLSMITLAAGTAFIMWLGEQMTERGIGNGISLIIFA 185
Query: 198 GILT------GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
GI+ G+T L + + M+ ++G+ V V G R++ +
Sbjct: 186 GIVARMPSALGHTVQLVQTGDIGFLVLLLLLVIMIAVIGII-------VFVERGQRRIPV 238
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
QY A ++P +N +G+ P + + L+ FP+ +A L P
Sbjct: 239 QY-----AKRVVGRRVYGGQSTHLPLKVNTAGVIPPIFASSLIIFPATIAQFLNVPILTS 293
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 369
+ L P + ++Y TI+ + F F A P ++A+ + K G IP ++PG
Sbjct: 294 ITSYLRPGS------FLYETIFVALIIFFCYFYTAVTFNPVDVAENMKKYGGYIPGIRPG 347
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE- 428
K T +Y+ K+ F G + +S++ +IL + R N F G TS+LI+VG ++
Sbjct: 348 KKTAQYIDKVLTRITFGGAIYVSVVCVLPSIL---ISRFNAPFYFGGTSLLIVVGVALDT 404
Query: 429 --------LRRSYQAY 436
++R Y+ +
Sbjct: 405 LTQIESHMIQRHYEGF 420
>gi|188996219|ref|YP_001930470.1| preprotein translocase subunit SecY [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931286|gb|ACD65916.1| preprotein translocase, SecY subunit [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 430
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 214/436 (49%), Gaps = 31/436 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
E+R ++ T +++ + R+G IP+PG + + Y + G++ + + GA +
Sbjct: 12 KELRNKILFTLIMLSVYRLGTHIPVPGINSETLLH-YFNSSGGALFNIYNLFSGGALGRF 70
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEAVI 141
S F LG+ P I ASI+MQ+L ++PSL +L+KE D G KI Y ++++ A +++
Sbjct: 71 SIFALGVMPYISASIIMQLLTAVIPSLERLQKEEGDYGRWKISQYTRYLTIAIAGFQSLG 130
Query: 142 VACYSLPYSIYAASHSVK-----HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++ + A + + V++T ++ G + + WI + I+E G G G S+II
Sbjct: 131 LSIWLSNLKTEAGASLISISPFWFVILTTVIVTTGTVFLMWIGEKITEFGIGNGISMIIL 190
Query: 197 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
GI+ G + K +LL +L + + +V V + E R++ + +
Sbjct: 191 AGIVAGIIPAILKTY-ELLKVGELSILTLLLAILIIVLVVAGIVYIQEAERRIPIHH--- 246
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--SPFWQHVKE 314
A R S + Y+PF +NPSG+ P++ +L FP+ +A S + + +
Sbjct: 247 ----ARRSISITNQSASYLPFKLNPSGVIPIIFAVAILMFPATIAQFFAGHSEIARIIVD 302
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKAT 372
L+P++ +VY+ +Y + F F A L P +IAD L K GA IP V+ G T
Sbjct: 303 YLSPQS------YVYFALYVGLIIFFAYFYTAILINPVDIADNLRKSGAFIPGVRAGTQT 356
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+EYL + F G + L+++A IL ++ +N F G TS LI+V ++
Sbjct: 357 VEYLNYVLTRLVFAGSIFLAVIAVLPMIL---IKLLNVPFYFGGTSALIVVVVALDTIHQ 413
Query: 433 YQAYNVMPSLSKALRR 448
+AY M L+R
Sbjct: 414 IEAYLAMKKYEGFLKR 429
>gi|340753402|ref|ZP_08690188.1| preprotein translocase, SecY subunit [Fusobacterium sp. 2_1_31]
gi|229422994|gb|EEO38041.1| preprotein translocase, SecY subunit [Fusobacterium sp. 2_1_31]
Length = 426
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 214/423 (50%), Gaps = 32/423 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLI----PQDYLSFVSGSVDELGDFGAELK 81
E+R R+ T ++ +++R+G IP PG D RL D LS+++ + GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVDVDRLASMASKSDVLSYIN-----MFSGGAFTR 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGAG 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLVYNPGISFFVRTITTLTAGTVFLMWVGEQISVKGIGNGVSLIIFLNVIS 192
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 260
++ + + ++ G F+ L+ VT+ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTVQKMQGDKFLIPLFV--LVAFLATVTIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
S I E + +IP +N +G+ PV+ + + P ++ + L S +K L+
Sbjct: 251 ----KSGIGE-KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNALPSDL--QLKTTLS--I 301
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTK 378
G VY +YA + F+ F A + P+++A+ L + G IP ++PG+ T+EYL
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFFYTALVFDPEKVAENLRQSGGTIPGIRPGEETVEYLEG 361
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQAY 436
+ + + GGL L++++ + Y+ + G + G T ++I+VG ++ + A+
Sbjct: 362 VASRITWGGGLFLAVIS-----ILPYVIFTSLGLPVYFGGTGIIIVVGVALDTIQQIDAH 416
Query: 437 NVM 439
VM
Sbjct: 417 LVM 419
>gi|115475569|ref|NP_001061381.1| Os08g0254500 [Oryza sativa Japonica Group]
gi|75294264|sp|Q6ZG25.1|SECY_ORYSJ RecName: Full=Preprotein translocase subunit SECY, chloroplastic;
AltName: Full=CpSecY; Flags: Precursor
gi|37572923|dbj|BAC98517.1| putative Preprotein translocase secY subunit, chloroplast precursor
[Oryza sativa Japonica Group]
gi|37573023|dbj|BAC98535.1| putative Preprotein translocase secY subunit, chloroplast precursor
[Oryza sativa Japonica Group]
gi|113623350|dbj|BAF23295.1| Os08g0254500 [Oryza sativa Japonica Group]
gi|125602744|gb|EAZ42069.1| hypothetical protein OsJ_26630 [Oryza sativa Japonica Group]
Length = 556
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 201/420 (47%), Gaps = 26/420 (6%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAE 79
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 137 DFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFAGNLDQNSLL-GTLDSFSGGGIG 195
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILE 138
+L LGI P I A I+ Q+L + P L L +KEG G +K+ Y + S+GFAI++
Sbjct: 196 -RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKVLQYTRYASVGFAIVQ 254
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A+ + PY S + V+ + LL G++ ++I + IS+ G G+SL+I
Sbjct: 255 AIGQVLFLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTS 311
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I++ + + ++Q + +L ++ F + + V V E RK+ L Y
Sbjct: 312 IISYLPASFGRTVAQAFQDG--NYVGLLTIILSFLFLVLGIVYVQEAERKIPLNY----- 364
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
AS S + Y+PF +N SG+ P++ +T LA P LA G F + LNP
Sbjct: 365 ASRYSSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLEFLKKAAISLNP 424
Query: 319 ETSVGARPWVYYTIY--AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
G ++ + AFF + + + P ++++ L + GA IP V+PGK+T ++
Sbjct: 425 ----GGALYIPTNVLLIAFFNYYYTFLQLD--PDDLSEQLKRQGASIPLVRPGKSTAAFI 478
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELRRSYQA 435
+ ++ G L++LA ++++ GF+ TSVLI+VG + R QA
Sbjct: 479 KTVLSNISVLGSAFLAVLAAGPSVVEQITHLTAFRGFA--GTSVLILVGCATDTARKVQA 536
>gi|412986227|emb|CCO17427.1| preprotein translocase subunit SecY [Bathycoccus prasinos]
Length = 558
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 175/349 (50%), Gaps = 23/349 (6%)
Query: 37 VLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS---VDELGDFGAELKLSFFQLGISPQI 93
L+V+SRIG +IP+ G DR + LS G VD L G+ KL F LGI P I
Sbjct: 155 ALLVVSRIGAYIPISGVDRTAFAES-LSNTGGVMSYVDTLTG-GSISKLGIFSLGIVPFI 212
Query: 94 VASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIY 152
+SI+ Q+L + P L +L+KE G G + Y + +L FA+++AV Y PY
Sbjct: 213 NSSIIFQLLSSVFPELQKLQKEEGESGRRQFMQYQRYGALAFALIQAVGQCLYVRPY--- 269
Query: 153 AASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLS 212
SV + + +L GAM + +I + ++E G G+SL+I I++ ++ + +
Sbjct: 270 VDDFSVMWLAESTAVLTAGAMILMYIGEVLNELKLGNGTSLLIFANIVSSLPSSIGQTVE 329
Query: 213 QLLGSSVRWWPFMLGLL-GVFTIVTMWAVVVTEGCRKVKLQY-YGFKLASAAREDSPITE 270
Q + F L + G F + T+ V V E RK+ +QY F A S
Sbjct: 330 Q--SKTDGNGAFTLAVFFGAFLLSTLGVVYVQEAERKIPMQYSTKFNSQGAGLSKSS--- 384
Query: 271 VEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYY 330
Y+PF +N +G+ P++ ++ L+A P+ LA + V + + P G P V
Sbjct: 385 ---YLPFKVNSAGVMPIIFSSSLMALPATLARFTDNGAVTSVAKFIYP-GGAGYIP-VNV 439
Query: 331 TIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKI 379
+ FF + + + PK++A+ L + GA IP V+PGK T EY+T++
Sbjct: 440 ALICFFNYFYTFLQLD--PKDVAEQLKRQGASIPGVRPGKNTREYITRV 486
>gi|333895234|ref|YP_004469109.1| preprotein translocase subunit SecY [Alteromonas sp. SN2]
gi|332995252|gb|AEF05307.1| preprotein translocase subunit SecY [Alteromonas sp. SN2]
Length = 439
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 211/445 (47%), Gaps = 31/445 (6%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 75
L++ A+S SE++ RL IV+ R+G ++P+PG D ++ D G++ E+ +
Sbjct: 6 LDSGAKSGL-SELKARLLFVLGAIVVFRLGSYVPIPGIDPAVL-ADLFEQQKGTIVEMFN 63
Query: 76 F---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
GA + S LGI P I ASI+MQ+L + P +++L+KEG G KI Y +++L
Sbjct: 64 MFSGGALERASVLALGIMPYITASIIMQLLSVVHPPMIELKKEGEAGRRKISQYTRYLTL 123
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
AI +++ ++ LP I + LV G M + W+ + I+E G G G
Sbjct: 124 VLAIFQSIGIST-GLPNLINGLVLNPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNG 182
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKV 249
S++I GI+ G + + Q + F+L L+ V I + VV E G R++
Sbjct: 183 ISILIFAGIVAGLPTAIGQTAEQARQGDINLL-FLL-LMAVIVIALTYLVVFVERGQRRI 240
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---S 306
+ Y A + ++P +N +G+ P + + ++ FP +A G S
Sbjct: 241 VVNY-----AKRQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIAGWFGQNES 295
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARI 363
W Q V +L+P +P +Y +YA + F F A + P+E AD L K GA +
Sbjct: 296 TAWLQDVALMLSP-----GQP-LYVMLYATAIIFFCFFYTALVFNPRETADNLKKSGAFV 349
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PG+ T Y+ K+ G L ++ + + + L N F G TS+LIIV
Sbjct: 350 PGIRPGEQTSRYIDKVMTRLTLAGALYITFIC---LVPEFMLIAWNVPFYFGGTSLLIIV 406
Query: 424 GSIIELRRSYQAYNVMPSLSKALRR 448
I++ Q + + L++
Sbjct: 407 VVIMDFMAQVQTHLMSSQYESVLKK 431
>gi|320548035|ref|ZP_08042315.1| preprotein translocase subunit SecY [Streptococcus equinus ATCC
9812]
gi|320447277|gb|EFW88040.1| preprotein translocase subunit SecY [Streptococcus equinus ATCC
9812]
Length = 434
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 218/431 (50%), Gaps = 45/431 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 79
+R ++F T +I + R+G I +PG + + + Q + L+ VSG + + +F
Sbjct: 14 NVRNKIFFTLFIIFVFRVGTHITVPGINAKSLDQLGELPFLNMLNLVSG--NAMSNF--- 68
Query: 80 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 69 ---SVFSMGVSPYITASIIVQLLQMDILPKFVEWSKQGEVGRRKLNQATRYISLVLAFIQ 125
Query: 139 AV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++ I A ++ SI ++ +VK ++ LL G+M ++W+ + I++ GFG G S+II
Sbjct: 126 SIGITAGFNTLSSISLVSTPNVKTYILIGALLTTGSMIVTWLGEQITDKGFGNGVSMIIF 185
Query: 197 VGILT---GYTETLYKMLSQLLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
GI++ T+Y+ + SS V + F+ L+ + + V + K+ +
Sbjct: 186 AGIISSIPNAISTIYEDFFVNVRSSDLVSSYIFVALLIVAVLAIVFFTTFVQQAEYKIPI 245
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----P 307
QY KL A S Y+P INP+G+ PV+ + + PS + ++ + P
Sbjct: 246 QYT--KLVQGAPTSS-------YLPLKINPAGVIPVIFASSITTIPSTIIPLISNGHDIP 296
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGARIPN 365
+ ++ LN +T +G IYA + LF+ F + P++ A+ L K + IP+
Sbjct: 297 WLTTLESFLNYQTPIGM------VIYAVLIILFSFFYTFVQVNPEKTAENLQKGASYIPS 350
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
V+PG+ T EYL+ + G + L+ ++ + I + ++ ++G TS+LI++ +
Sbjct: 351 VRPGRETEEYLSSLLKKLATVGSIFLAFISLTPIIAQQAM-NLSSSIALGGTSLLILIST 409
Query: 426 IIELRRSYQAY 436
IE + + Y
Sbjct: 410 GIEGMKQLEGY 420
>gi|242278678|ref|YP_002990807.1| preprotein translocase subunit SecY [Desulfovibrio salexigens DSM
2638]
gi|242121572|gb|ACS79268.1| preprotein translocase, SecY subunit [Desulfovibrio salexigens DSM
2638]
Length = 436
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 200/423 (47%), Gaps = 28/423 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E++++LF T +L+ + RIG IP+PG D + D+ VS ++ L D G LS
Sbjct: 14 ELKKKLFWTFLLLAVYRIGIHIPVPGVDSSAL-ADFFESVSNTLFGLFDMFSGGGLRNLS 72
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q+L + P++ +L++EG G +KI Y + ++ +++ +A
Sbjct: 73 IFALGIMPYISASIIVQLLGVVSPTIKRLQEEGAQGRKKITQYTRYGTVLITLVQGFGIA 132
Query: 144 CYSLPYSIYAASHSVKHV-----MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+ + V H +T L G + + W+ + ++E G G G S+II G
Sbjct: 133 VGLESMTSPTGAPVVLHAGWAFRGITILTLTAGTVFLMWLGEQMTEKGIGNGISMIIFAG 192
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFK 257
I+ G ++ + + + F+L + F + + +V E G R++ + Y
Sbjct: 193 IVAGLPSAIFNTVRLMQAGEITL--FLLLFVMAFMVAILAFIVYMERGQRRIPIHY---- 246
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 317
A + ++P IN +G+ P + + +L FP+ LAS +
Sbjct: 247 -AKRMMGRKMMGGQTTHLPLRINTAGVIPPIFASSILMFPATLASFSNNEILSKFSAYFA 305
Query: 318 PETSVGARPWVYYTIYAFFVFLFN--IFDIANLPKEIADYLNKMGARIPNVKPGKATIEY 375
P + V VY + FF + + +FD PK IA+ + K G IP ++PG T EY
Sbjct: 306 PSSIV--YNVVYIALIIFFCYFYTAIMFD----PKGIAENIQKQGGFIPGIRPGNRTREY 359
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
+ ++ WG L ++ + IL + + N F G T++LI+VG ++ ++
Sbjct: 360 IDRVLTRITLWGSLYVAAICVLPMIL---IAQFNVPFYFGGTALLIVVGVAMDFMGKIES 416
Query: 436 YNV 438
Y +
Sbjct: 417 YMI 419
>gi|126728204|ref|ZP_01744020.1| protein translocase subunit SecY [Sagittula stellata E-37]
gi|126711169|gb|EBA10219.1| protein translocase subunit SecY [Sagittula stellata E-37]
Length = 448
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 196/425 (46%), Gaps = 35/425 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
+++R R+F T L+++ R+G FIP+PG D + +D++ S V + GA ++
Sbjct: 14 TDLRNRIFFTLGLLIVYRLGTFIPVPGIDGAAL-RDFVEQASTGVAGIVSMFTGGALGRM 72
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
F LGI P I ASI++Q+L +VP+L QL+KEG G +KI Y + ++ A ++A +
Sbjct: 73 GIFALGIMPYISASIMVQLLTAMVPTLEQLKKEGEQGRKKINQYTRYATVALATMQAYGL 132
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
A SL LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 133 AV-SLEGGDLVTDPGWYFRAACVITLVGGTMFLMWLGEQITARGVGNGISLIIFVGIVAE 191
Query: 203 YTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFK 257
L + + G S P ++G++ + + V + RK+ +QY G K
Sbjct: 192 LPAALAQFFAS--GRSGAISPAVIVGVIIAVAALIAFVVFMERALRKITIQYPRRQVGMK 249
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVK 313
+ A ++P +NP+G+ P + + LL P +++ GS P +
Sbjct: 250 MTEAQSS---------HLPVKVNPAGVIPAIFASSLLLLPVTISTFSGSDSAGPVMSTIL 300
Query: 314 EILNPETSVGARPWVYYTIYAFFVFL--FNIFDIANLPKEIADYLNKMGARIPNVKPGKA 371
P +P A VF F F+++ P ++AD L +P ++PGK
Sbjct: 301 AYFGP-----GQPLYLLFFGAMIVFFAYFYTFNVSFKPDDVADNLKNQNGFVPGIRPGKK 355
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T EYL + G L L+ +A IL L F G TSVLI+V ++ +
Sbjct: 356 TAEYLEYVVNRVLVVGSLYLAGVALMPEILRTQL---AIPFYFGGTSVLIVVSVTMDTIQ 412
Query: 432 SYQAY 436
Q++
Sbjct: 413 QVQSH 417
>gi|425455946|ref|ZP_18835657.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9807]
gi|389803096|emb|CCI17962.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9807]
Length = 439
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 197/402 (49%), Gaps = 25/402 (6%)
Query: 45 GYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCH 104
G F+P+PG DR + + + + +L G L F LGI P I ASI++Q+L
Sbjct: 41 GMFVPIPGLDRARLAEIIQGNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLLTA 100
Query: 105 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 163
+PSL L+K EG G KI +I+ G+AI++++ + L + + ++ +
Sbjct: 101 ALPSLEDLQKNEGEAGRRKIAQITRYIAFGWAIIQSIGI-TLGLLVANGVVAGTLPSIAA 159
Query: 164 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP 223
T LV G+M + WI + I+E G G G+SL+I V I+ +TL ++ +
Sbjct: 160 TVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQAIA 219
Query: 224 FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINP 281
++ LL VF ++ + V V EG R++ + SA R+ E Y+P +N
Sbjct: 220 QVVILLLVFLVMIIGIVFVQEGTRRI-------PIVSARRQVGRRLYRERTSYLPLRLNQ 272
Query: 282 SGMQPVLTTTYLLAFPSILASIL--GSPFWQHVKEILNPETSVGARP--WVYYTIYAFFV 337
G+ P++ + +L P L L +P Q + +++N RP W Y Y+ +
Sbjct: 273 GGVMPIIFASAVLVLPFQLVQALPTDNPVGQVLVQLVN-----ALRPDSWGYVAFYSLLI 327
Query: 338 FLFNIF---DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSIL 394
F+ F I N PK+++ L KMG IP ++PG AT YL + G L LS++
Sbjct: 328 LGFSFFYASLIVN-PKDMSQNLKKMGTSIPGIRPGTATTNYLEGVLNRLTLLGALFLSLV 386
Query: 395 ATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
AT T+++ + +G TS+LI+VG I+ + Q Y
Sbjct: 387 ATIPTLVESA-TGVTTFRGLGATSLLILVGVAIDTAKQIQTY 427
>gi|348026038|ref|YP_004765843.1| preprotein translocase subunit secY [Megasphaera elsdenii DSM
20460]
gi|341822092|emb|CCC73016.1| preprotein translocase subunit secY [Megasphaera elsdenii DSM
20460]
Length = 420
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 210/446 (47%), Gaps = 52/446 (11%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L N E R+R T ++ VI R+G IP+PG D +I F SG++ L
Sbjct: 1 MLENIQNVLNVPEFRKRAVFTLIMFVIFRLGVHIPVPGVDSSVIEN---LFSSGNLFGLL 57
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
D GA K S + I+P I ASI+MQ+L +VP+ Q K+ +G +KI+ + +
Sbjct: 58 DLFAGGALSKFSVLAMSITPYINASIIMQLLTAVVPTFEQWAKDNQEGRDKIQKVTRYGT 117
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+ A+++A ++ Y+L + S V++ + +L G + W+ D I+ G G G
Sbjct: 118 VVLALIQAFAMS-YALKVNNALIVDSWAMVVMVSLILTAGTCFLMWLGDQITAGGIGNGI 176
Query: 192 SLIICVGILTGYTE---TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
SLII GI+ + + T+YK + GS + + ++ +F IV + + VT+G R+
Sbjct: 177 SLIIFAGIVARFPQGCMTIYKYIQA--GSINIFQALLFAVIALFMIVVV--IEVTQGQRR 232
Query: 249 VKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
V +QY G K+ +IP +N +G+ P++ + +L FP +A +
Sbjct: 233 VTVQYAKRIVGRKMYGGH---------STHIPLKVNQAGVIPIIFASSVLMFPITIAQFV 283
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKMGA 361
+ Q V T +YA + F F A N+P ++ + + K G
Sbjct: 284 QNDTIQWVASFFAWGTVTNT------VMYALLIMFFTYFYTAISLNIP-QLTENMQKYGG 336
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSV 419
IP ++PG+ T Y+ +I G L+ +A IL +++ I EG G T++
Sbjct: 337 FIPGIRPGQPTAMYIDRIMTRITLAGAFFLAFIA----ILPNFIGWITGIEGVYFGGTAI 392
Query: 420 LIIVGSIIE---------LRRSYQAY 436
LI+VG I+ L R YQ +
Sbjct: 393 LIVVGVAIDTMKQAESLVLNRQYQGF 418
>gi|163745564|ref|ZP_02152924.1| protein translocase subunit SecY [Oceanibulbus indolifex HEL-45]
gi|161382382|gb|EDQ06791.1| protein translocase subunit SecY [Oceanibulbus indolifex HEL-45]
Length = 460
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 207/450 (46%), Gaps = 51/450 (11%)
Query: 12 LSSVLNNAAESFFK-----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV 66
+S+V N AA + + +++R R+ T L+++ R+G FIP+PG D + +D++
Sbjct: 2 VSAVENMAANTSWAALGKATDLRNRILFTLGLLIVYRLGTFIPVPGIDGGAL-RDFMESA 60
Query: 67 S---GSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKI 123
G + + GA ++ F LGI P I ASI++Q+L +VP+L QL+KEG G +KI
Sbjct: 61 GQGIGGMVSMFTGGALGRMGIFALGIMPYISASIIVQLLTSMVPALEQLKKEGEQGRKKI 120
Query: 124 KSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC------GAMTMSW 177
Y + ++ A L++ Y L S+ A M F+ C G M + W
Sbjct: 121 NQYTRYGTVALATLQS-----YGLAVSLQAGDIVADGQMGFGFIAACMITLVGGTMFLMW 175
Query: 178 ICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVT 236
+ + I+ G G G SLII VGI+ + + + G S P ++G+L +
Sbjct: 176 LGEQITARGIGNGISLIIFVGIIAEVPAAIAQFFAS--GRSGAISPAVIIGVLVMVIATI 233
Query: 237 MWAVVVTEGCRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTY 292
M+ V + RK+ +QY G K+ ++P +NP+G+ P + +
Sbjct: 234 MFVVFMERALRKIHIQYPRRQVGMKMYDGGTS---------HLPVKVNPAGVIPAIFASS 284
Query: 293 LLAFPSILASILG---SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFL--FNIFDIAN 347
LL P +++ G SP + P +P A VF F F+++
Sbjct: 285 LLLLPVTVSTFSGNSTSPVMSWLLANFGP-----GQPLYLLFFVAMIVFFAYFYTFNVSF 339
Query: 348 LPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR- 406
P ++AD L +P ++PGK T EYL + G L+ + +L LR
Sbjct: 340 KPDDVADNLKNQNGFVPGIRPGKRTAEYLEYVVNRILVLGSFYLA----AVCVLPEILRG 395
Query: 407 RINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ F G TSVLI+V ++ + Q++
Sbjct: 396 QFAIPFYFGGTSVLIVVSVTMDTIQQVQSH 425
>gi|375147881|ref|YP_005010322.1| protein translocase subunit secY/sec61 alpha [Niastella koreensis
GR20-10]
gi|361061927|gb|AEW00919.1| protein translocase subunit secY/sec61 alpha [Niastella koreensis
GR20-10]
Length = 443
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 201/421 (47%), Gaps = 45/421 (10%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDFGAELKLSF 84
E+R ++ VT LI + R+G I LPG D ++ + G +D GA + S
Sbjct: 15 EELRSKILVTIALIAVYRLGTHIVLPGIDPEKITVNQAGGGILGLIDAFAG-GAFHQASI 73
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
LGI P I ASI +Q++ + P +L+KEG G +KI Y ++++ IL+A
Sbjct: 74 LALGIMPYISASIFIQLMTILYPPFQKLQKEGDSGRKKINQYTRYLTVLVTILQASAYVA 133
Query: 145 YSLPYSIYAASHSVKHV--MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
+ + A S K + T +L G + + W+ + I++ G G GSS+II VGIL
Sbjct: 134 FLNTTNAQAMVESYKPYFWVSTTIILTAGTLFVMWLSEKITDKGLGNGSSVIIMVGILAR 193
Query: 203 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGFKL 258
+ +++++ S + + + + M +++ +G RKV +QY G +
Sbjct: 194 FPQSIWQEWSARSNRGGGGLLIFVIEIAILVAIIMGLIILIQGVRKVPVQYAKQIVGNRQ 253
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI-----LGSPFWQHVK 313
AR+ ++P +N +G+ P++ ++ P++L++ L + F H
Sbjct: 254 FGGARQ---------FLPLKVNSAGVMPIIFAQAIMFLPTLLSNFDSTKGLAAVFGNH-- 302
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
+ W Y IYA V F A + PK+IAD L + IP VKPG+
Sbjct: 303 ----------SNFW-YMVIYAVMVIGFTFLYTALIFNPKQIADDLKRNNGFIPGVKPGQP 351
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRR--INEGFS--IGFTSVLIIVGSII 427
T +Y+ + F G +LL+++ IL + +R + + FS G TS+LI+VG I+
Sbjct: 352 TADYIGAVMDKITFPGAVLLALVG----ILPGFAQRMSVQQSFSSFFGGTSLLIMVGVIL 407
Query: 428 E 428
+
Sbjct: 408 D 408
>gi|328955893|ref|YP_004373226.1| protein translocase subunit secY/sec61 alpha [Coriobacterium
glomerans PW2]
gi|328456217|gb|AEB07411.1| protein translocase subunit secY/sec61 alpha [Coriobacterium
glomerans PW2]
Length = 427
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 205/425 (48%), Gaps = 28/425 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYL---SFVSGSVD 71
+L +F ++R ++ TA ++V+ R G +P+PG + + + S SG++
Sbjct: 1 MLTGLKNAFGIKDLRSKILFTAGMLVVYRFGAHLPVPGVPFQGMMNLFGGNGSVASGAMA 60
Query: 72 ELGDF-GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
L F G LK +S F LGI P I +SI++Q+L +VPSL +L +EG G KI Y +
Sbjct: 61 LLNLFSGGALKYVSVFSLGIMPYITSSIILQLLQSVVPSLHELSREGEVGQTKITQYSRY 120
Query: 130 ISLGFAILEAV----IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 185
++LG A+L ++ + Y + ++ A ++ +MV LV GAM + WI + I++
Sbjct: 121 LTLGLAVLNSIGYLFLFKSYGVSFNGAGAPEAIFDIMVVG-TLVAGAMLIMWIGELITQR 179
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G G SLII I+ G + + S L + + +L V ++ V + G
Sbjct: 180 GIGNGMSLIIFANIMAGLPQAIVSSSSAGLKGIIVTIVVFVVILLVIPLI----VFIERG 235
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL- 304
R++ +QY A + Y+P +N +G+ P++ + LL FP+ +A
Sbjct: 236 QRRIPVQY-----AKRVVGRRIMGGQSTYLPIKVNTAGVVPIIFASALLYFPAQIAVFFP 290
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIP 364
G F Q L S G WV ++ F F + N P + AD L K G IP
Sbjct: 291 GIDFIQTAAGAL----SAGWLNWVLNVVFIVFFAYFYTSMVFN-PDDTADNLKKQGGFIP 345
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILA-TSSTILDHYLRRINEGFSIGFTSVLIIV 423
V+PG+AT Y+ + L+++A S + R+ + F G TSVLI+V
Sbjct: 346 GVRPGRATAAYIKNALNKITLPSAVFLAVIAIVPSVVFSFTGNRLIQSF--GGTSVLIMV 403
Query: 424 GSIIE 428
G +++
Sbjct: 404 GVVLD 408
>gi|21674978|ref|NP_663043.1| preprotein translocase subunit SecY [Chlorobium tepidum TLS]
gi|21648211|gb|AAM73385.1| preprotein translocase SecY subunit [Chlorobium tepidum TLS]
Length = 441
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 204/430 (47%), Gaps = 36/430 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
E+R+R+ T +L+ + R+G I +PG D + + S S D G F GA +
Sbjct: 15 ELRQRILYTLLLLFVYRLGSHITIPGVDASAVAS---ATTSHSNDLFGLFDLFVGGAFAR 71
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
S F LGI P I ASI++Q+L + P + +L+KEG +G +KI Y + ++ A+L+A
Sbjct: 72 ASIFSLGIMPYISASIIIQLLGAVTPYVQKLQKEGEEGRQKINQYTRYGTILIALLQAWG 131
Query: 142 VAC-YSLPYS---IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
V+ S P S + + +L + + W+ + I+E G G G SLII +
Sbjct: 132 VSVNLSSPSSFGKVVVPDPGFFFTITAVIILTASTVFVMWLGELITERGIGNGISLIIMI 191
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY---- 253
GIL + +L +Q + + W + ++ + + V++T R++ +Q+
Sbjct: 192 GILARFPASLVAE-AQSVSFGSKNWIVEIVIMALMVAIVAIVVILTVATRRIPVQHAKRV 250
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
G K+ + YIP IN +G+ P++ ++ PS S F+ +
Sbjct: 251 VGRKVYGGGTQ---------YIPIKINTAGVMPIIFAQSIMFLPSTFLS-----FFPESE 296
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKA 371
+ + W Y ++ + F F IA PKE+AD + + G IP V+PGK
Sbjct: 297 AMQKVAAAFAYDSWFYAVVFGLMIVFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKN 356
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--IGFTSVLIIVGSIIEL 429
T E++ I G + L+++A T L ++ + GF+ G TS+LI+V ++
Sbjct: 357 TEEFIDNILTRITLPGAIALAVIAILPTFLTKFV-NVTPGFANFFGGTSLLIVVSVGLDT 415
Query: 430 RRSYQAYNVM 439
+ +++ +M
Sbjct: 416 LQQVESHLMM 425
>gi|302877821|ref|YP_003846385.1| preprotein translocase subunit SecY [Gallionella capsiferriformans
ES-2]
gi|302580610|gb|ADL54621.1| preprotein translocase, SecY subunit [Gallionella capsiferriformans
ES-2]
Length = 438
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 207/436 (47%), Gaps = 30/436 (6%)
Query: 12 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 71
+S V +A ++ + R F+ L+V RIG IP+PG D ++ + + +G +
Sbjct: 1 MSKVAKDAPKAKYGDLSTRLWFLLGALVVF-RIGAHIPVPGIDPVVLADLFKTQKNGILG 59
Query: 72 ELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
F GA + + F LGI P I ASI+MQ+ VP L QL+KEG G KI Y +
Sbjct: 60 MFNMFSGGALSRFTIFALGIMPYISASIIMQLASIAVPYLEQLKKEGESGRRKITQYTRY 119
Query: 130 ISLGFAILEA--VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
+LG A+ ++ + VA + P + + M T LV G M + W+ + I+E G
Sbjct: 120 GTLGLAVFQSFGISVALQAQPGLVLHPGSMFQ--MTTMITLVTGTMFLMWLGEQITERGL 177
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G G SLII GI G + L +L + P +L L VT V V G R
Sbjct: 178 GNGISLIIFAGIAAGLPSAIGSTL-ELARTGAFSIPLVLFLFVGAIAVTALVVFVERGQR 236
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
K+ + Y ++ + ++P +N +G+ P + + ++ FP+ +A G+
Sbjct: 237 KILVNYAKRQVGNRVYGGQ-----SSHLPLKLNMAGVIPPIFASSIILFPATIAGWFGNS 291
Query: 308 ----FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGA 361
+ + ++L+P +P +Y YA + F F A + PKE AD L K GA
Sbjct: 292 QGMGWLKDASQMLSP-----GQP-IYVLAYASAILFFCFFYTALVFSPKETADNLKKSGA 345
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVL 420
+P ++PG+ T +Y+ KI G + ++++ +L +L + N F G TS+L
Sbjct: 346 FLPGIRPGEQTAKYVEKIMLRLTLIGAVYITLVC----LLPEFLVVKFNVPFYFGGTSLL 401
Query: 421 IIVGSIIELRRSYQAY 436
I+V ++ Q+Y
Sbjct: 402 ILVVVTMDFMAQVQSY 417
>gi|256825866|ref|YP_003149826.1| protein translocase subunit secY/sec61 alpha [Kytococcus
sedentarius DSM 20547]
gi|256689259|gb|ACV07061.1| protein translocase subunit secY/sec61 alpha [Kytococcus
sedentarius DSM 20547]
Length = 439
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 207/440 (47%), Gaps = 54/440 (12%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L++ +F ++R +L T ++ + R+G +P PG D L+ Q + +G+ LG
Sbjct: 1 MLSSFGRAFLTPDLRGKLLFTLAIMALFRLGSHVPTPGIDYSLV-QTCQANGAGTNSLLG 59
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+LS F LGI P I ASI++Q+L ++P +L++EG G K+ Y +
Sbjct: 60 LTNMFSGGALLQLSIFALGIMPYITASIIVQLLTVVIPHFERLKQEGSAGQAKMTQYTRY 119
Query: 130 ISLGFAILEAVIVACYSL-PYSIYAA----------SHSVKHVMVTAFLLVCGAMTMSWI 178
+++G A+L++ + ++ P+ ++ S S+ V + L G + W+
Sbjct: 120 LTIGLAVLQSTTLISFARNPHQLFGGTPAQCPTVMTSESLGTVALMVLTLTAGTGLVMWL 179
Query: 179 CDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMW 238
+TI+E G G G SL+I I G+ +L+ + + W F + LL I+T+
Sbjct: 180 GETITEKGIGNGMSLLIFTAIAAGFPGSLWAIKDR------GWDKFAMVLLLGLVILTI- 232
Query: 239 AVVVTEGC-RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
VV E C R+V +QY A YIP +N + + P++ + +L P
Sbjct: 233 -VVFVEQCQRRVPVQY-----AKRMVGRRMYGGTSTYIPLKLNMANVIPIIFASSILMLP 286
Query: 298 SILASIL----GS--PFW-----QHVKEILNPETSVGARPWVYYTIYAFFVFLFN--IFD 344
++A GS P W +H++ +P + VY+ + FF F + FD
Sbjct: 287 MMVAQFQTPNDGSRPPAWVEWVSRHLQMSTDPVYVI-----VYFALIVFFAFFYTSITFD 341
Query: 345 IANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHY 404
P ++AD + + G +P V+ G+ T +YL + G L L ILA
Sbjct: 342 ----PDDVADSMKRYGGFVPGVRAGRPTAQYLRYVLNRITAPGALYLGILALIPLYAFDR 397
Query: 405 LRRINEGFSIGFTSVLIIVG 424
L I + F G S+LI+VG
Sbjct: 398 LGAIGD-FPFGGASLLIVVG 416
>gi|159901445|ref|YP_001547692.1| preprotein translocase subunit SecY [Herpetosiphon aurantiacus DSM
785]
gi|159894484|gb|ABX07564.1| preprotein translocase, SecY subunit [Herpetosiphon aurantiacus DSM
785]
Length = 439
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 223/447 (49%), Gaps = 43/447 (9%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGDFGAEL 80
+E+R+++ T +++VI R IP+PG DR Q LS ++ ++ L GA
Sbjct: 12 AEVRKKILFTMMMLVIFRFIAAIPVPGVDTAELDRLFNGQLPLSDLANFLNLLSG-GALR 70
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL------GF 134
+ S +G+ P I A I+MQ+L ++P+L QL KEG G +I+ Y +++++ G+
Sbjct: 71 QFSVAAMGVYPYITAQIIMQLLIPLIPALEQLSKEGEQGRNRIQRYQYFLTVPLAYLQGY 130
Query: 135 AILEAVIVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
++++I + +L ++ ++ + + ++V G+M + W+ + I E G G G S+
Sbjct: 131 GQIKSLINSGINLFGTLNFSITENFFQTFSILTIMVSGSMFLVWMGELIDERGIGNGLSM 190
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
II GI+T +Y+ ++ + +L ++ + T+V + V++TEG R++ +QY
Sbjct: 191 IIFGGIVTALPSMVYQAITTSSSGNNVIGGILLLIVTLATVVGI--VLITEGQRRIPVQY 248
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL----GSPFW 309
A R + ++P +N +GM P++ +L FPS +AS GS F+
Sbjct: 249 -----AKRVRGNKVYGGQSSHLPLKVNMAGMIPLIFAQSILIFPSTVASYFWNPNGSGFF 303
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFFVFLFN------IFDIANLPKEIADYLNKMGARI 363
V S G + V LF +F+ NLP + L + G I
Sbjct: 304 NGVANFF--VNSFGPNGLAFTLAMFVLVLLFTYFYALVMFNQQNLP----EMLQRNGGFI 357
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS--VLI 421
P ++PG+ T YLTK+ G + L+++A L +++++I G IGF+S +LI
Sbjct: 358 PGIRPGRNTEVYLTKVLNRITLIGAVGLAVVAA----LPYFVQQIT-GLQIGFSSTGLLI 412
Query: 422 IVGSIIELRRSYQAYNVMPSLSKALRR 448
+VG ++ R +A +M + + R
Sbjct: 413 VVGVAVDTMRQLEAQMMMRNYEGFISR 439
>gi|443329313|ref|ZP_21057900.1| protein translocase subunit secY/sec61 alpha [Xenococcus sp. PCC
7305]
gi|442791055|gb|ELS00555.1| protein translocase subunit secY/sec61 alpha [Xenococcus sp. PCC
7305]
Length = 440
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 216/436 (49%), Gaps = 32/436 (7%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF-VSGSVDE 72
A E+F + + +R RL +T L+++ R+G FIP+PG DR + + V G +D
Sbjct: 8 TAQETFLQMAQAAGLRGRLLITIGLLILVRLGIFIPVPGIDRASFAEAVQNLPVLGFLDI 67
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 131
G L F LGI P I ASI+MQ+L +P+L L+K EG G KI Y +++
Sbjct: 68 FTGGGLS-ALGIFALGILPFINASIIMQLLTAAIPALEDLQKNEGEAGRRKISQYTRYVA 126
Query: 132 LGFAILEAVIVACYSL-PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
L +AIL+++ + L PY++ + T L G+M + W+ + I+E G G G
Sbjct: 127 LAWAILQSLGLTIGLLRPYALNPGFWFIPE---TVLALTAGSMFVMWVSELITERGIGNG 183
Query: 191 SSLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
+SL+I + I+ + L + +Q G +L L+ + TIV + V V EG R+
Sbjct: 184 ASLLIFINIVATLPKNLGNTIEFAQQGGREAVAQVVILLLVFLVTIVGI--VFVQEGTRR 241
Query: 249 VKLQYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG- 305
+ + SA R+ E Y+P +N G+ P++ T +++ P+ LA G
Sbjct: 242 IPI-------ISARRQVGKRLYRERTSYLPLRLNQGGVMPIIFATAVISLPTSLAQFAGG 294
Query: 306 -SPFWQHVKEILNPETSV-GARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGA 361
S F Q + + N T + G W+ + + F+ F + P +++ L KMG
Sbjct: 295 DSGFGQILVQFANAVTPLRGEINWIAIAFQSLLILFFSYFYASLIMNPVDMSQNLKKMGT 354
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVL 420
IP ++PGKAT YL ++ G + L+++ ++++ R + GF G TS+L
Sbjct: 355 SIPGIRPGKATSNYLEQVMNRLTLLGAIFLAVVVAIPSLIEAATRVQTFNGF--GATSLL 412
Query: 421 IIVGSIIELRRSYQAY 436
I+VG I+ + Q Y
Sbjct: 413 ILVGVAIDTAKQIQTY 428
>gi|317497075|ref|ZP_07955402.1| preprotein translocase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429762524|ref|ZP_19294913.1| preprotein translocase, SecY subunit [Anaerostipes hadrus DSM 3319]
gi|316895620|gb|EFV17775.1| preprotein translocase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429181514|gb|EKY22673.1| preprotein translocase, SecY subunit [Anaerostipes hadrus DSM 3319]
Length = 438
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 217/440 (49%), Gaps = 35/440 (7%)
Query: 16 LNNAAESFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
++NA S FK+ ++R++L T +++++ R G +P+P D I S + S L
Sbjct: 1 MSNAVVSAFKNKQLRKKLLFTTLILIVVRFGSQLPIPEIDSAQISAYLKSTLGDSFSLLN 60
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
F G+ +++S F L ++P I +SI+MQ++ ++P+L +++K+G DG +++ ++++
Sbjct: 61 SFTGGSFMQMSVFALSVTPYITSSIIMQLMTIVIPALEEMQKDGEDGRKRMAKITRYVTV 120
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
AI+E +A ++ ++ L GA+ + W+ + I+ESG G G S
Sbjct: 121 VLAIIEGAGLAIGFANQGALGTDYTTFTIVTMIIALTAGAVLVMWLGERITESGIGNGIS 180
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRKVK 250
+I+ V I++G + +Q + + G ++GV V ++ +V+++ R +
Sbjct: 181 IILLVNIVSGMPGDFTSLYNQFMKGKQIGPALIAGCVIVGVVLAVVVFVIVLSDAERHIP 240
Query: 251 LQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
+QY G KL + IP +N +G+ P++ + ++ FP +L ++L
Sbjct: 241 VQYSKKMQGRKLVGGQQSK---------IPLKVNTAGVIPIIFASSIMQFPIMLQNVLK- 290
Query: 307 PFWQHVKEILNPETSVGARPW---------VYYTIYAFFVFLFNIF--DIANLPKEIADY 355
+++ I TS+ + W + IY V LF F I P EI++
Sbjct: 291 --YENNGFIGKALTSLNSSTWFDASHPKRSIGLLIYIVLVVLFAYFYTSITFNPLEISNN 348
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
+ K G IP ++PGK T++YL KI F G L+I+A + S G
Sbjct: 349 MKKQGGFIPGIRPGKPTVDYLNKILKYIIFIGAAGLTIVAVVPFFFNGVF---GASVSFG 405
Query: 416 FTSVLIIVGSIIELRRSYQA 435
TS++I+VG I+E + Q+
Sbjct: 406 GTSIIIVVGVILETIKQIQS 425
>gi|336053525|ref|YP_004561812.1| preprotein translocase subunit secY [Lactobacillus kefiranofaciens
ZW3]
gi|363805543|sp|F6CD01.1|SECY1_LACKZ RecName: Full=Protein translocase subunit SecY 1
gi|333956902|gb|AEG39710.1| Preprotein translocase subunit secY [Lactobacillus kefiranofaciens
ZW3]
Length = 431
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 213/430 (49%), Gaps = 27/430 (6%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
S L NA F EIR +++ T ++++ RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIYFTLFILLLYRIGANITVPGINVKAITQVAQTGLVPMLDTV 59
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLTL 118
Query: 133 GFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFVQSIGITLGFNALTQMGLVKNQTPQTYVEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 245
S+II GI+ LY++ + + +S RW F + ++ IVT V +
Sbjct: 179 VSVIIFAGIIARLPSGLYQIYKEEIINNSASDRWQGILFFIAVIVAILIVTQLVTWVEQA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASIL 304
R++ +QY + I+ E ++P +N SG+ PV+ + + P +IL +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIVTPATILMAFQ 289
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGAR 362
+ Q +++N S+ P V IY + LF F + P+++A+ L K GA
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGV--IIYTLLIILFTFFYAFVQVNPEKLAENLQKQGAY 347
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP+V PGK T +Y++K+ G + L ++A + ++ + +G TS+LI+
Sbjct: 348 IPSVWPGKDTQDYVSKMLIKLSTVGSIFLGLVALLPQLATNFW-NLPSSIGLGGTSLLIV 406
Query: 423 VGSIIELRRS 432
+G ++EL R
Sbjct: 407 IGVVLELSRQ 416
>gi|345001517|ref|YP_004804371.1| preprotein translocase subunit SecY [Streptomyces sp. SirexAA-E]
gi|344317143|gb|AEN11831.1| preprotein translocase, SecY subunit [Streptomyces sp. SirexAA-E]
Length = 439
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 212/443 (47%), Gaps = 38/443 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPG--FDRRLIPQDYLSFVSGSVDE 72
+L A +F ++R++L T +IV+ R+G IP+PG ++ I D S + S+
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVLYRLGAHIPVPGVSYENVQICVDQASDGNNSLFG 60
Query: 73 LGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
L + GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 61 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRY 120
Query: 130 ISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICD 180
+++ AIL+ + + ++++ + S+ +V + G + W+ +
Sbjct: 121 LTVALAILQGTGLVATARSGALFSGCPVANQIVPNQSIFTTVVMVITMTAGTAAVMWLGE 180
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKML-SQLLGSSVRWWPFMLGLLGVFTIVTMWA 239
I++ G G G S+++ + I + L+ + S L W F+ +L F +V +
Sbjct: 181 LITDRGIGNGMSILMFISIAASFPAALWAIKESGKLADG--WIEFITVILIGFVMVGL-V 237
Query: 240 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V V + R+V +QY + + + YIP +N +G+ PV+ + LL P++
Sbjct: 238 VFVEQAQRRVPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPAL 292
Query: 300 LA----SILGSPFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEI 352
+ S G W + G P+ Y+ + FF F + I+ P+E+
Sbjct: 293 IVQFSNSTAGWATW------IQDHFVKGDHPYYIATYFLLIVFFAFFY--VAISFNPEEV 344
Query: 353 ADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGF 412
AD + K G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F
Sbjct: 345 ADNMKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGGANQNF 404
Query: 413 SIGFTSVLIIVGSIIELRRSYQA 435
G TS+LIIVG +E + ++
Sbjct: 405 PFGGTSILIIVGVGLETVKQIES 427
>gi|241895168|ref|ZP_04782464.1| preprotein translocase subunit SecY [Weissella paramesenteroides
ATCC 33313]
gi|241871474|gb|EER75225.1| preprotein translocase subunit SecY [Weissella paramesenteroides
ATCC 33313]
Length = 435
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 210/435 (48%), Gaps = 30/435 (6%)
Query: 12 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 71
L +VLN+ E +IR++LF T ++++ R+G +I +PG + + + S + GS+
Sbjct: 2 LKTVLNSLKEK----DIRKKLFFTLWILIVYRLGAYITVPGINTAALTEVANSGL-GSIL 56
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ G S F +G+SP + A I++Q+L IVP V+ K+G G K+ W+
Sbjct: 57 NMFSGGGLTNYSLFAMGVSPYVTAQIVVQLLQMDIVPRFVEWSKQGEVGRRKLNQVTRWL 116
Query: 131 SLGFAILEAV-IVACYS-LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
++ A ++++ I A ++ L + + + ++ F+L G M W+ + I+E G G
Sbjct: 117 TIVLAFVQSIGITAGFNQLSQVNLVKTPNTETYLLIGFILTAGTMLSVWLGEMITERGLG 176
Query: 189 QGSSLIICVGILTGYTETLYKMLSQ--LLGSS-VRWWPFMLGLLGVFTIVTMWAVVVTEG 245
QG S++I GI+ +Y++ + L G R W F +G++ +F +V + +
Sbjct: 177 QGVSMLIFAGIIARLPAGIYQLFKEHILQGDDPARGWAFFVGIMIIFVVVIAFVTWFNQA 236
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
RKV +QY S + Y+P IN +G+ PV+ + LL P +
Sbjct: 237 IRKVPMQY---------TRRSVGSGSSSYLPLRINIAGVIPVIFASSLLVTPQTILQAFA 287
Query: 306 SPF-----WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 360
S F + V + L+ +T G VY + F F + + P+++ + L K G
Sbjct: 288 SKFADAGWYNTVMQYLSIQTMQGGI--VYTLLIVLFTFFYAFVQVN--PEKVQENLQKQG 343
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
+ I V PG +T ++++ + G L L +A + + H ++ ++ TS+L
Sbjct: 344 SYIVGVWPGPSTEKWMSGLLMRLSVVGALFLGFVALAPILATHVF-GLDSNLAMSGTSIL 402
Query: 421 IIVGSIIELRRSYQA 435
I++G I+L R +
Sbjct: 403 IVIGVAIDLIRQLEG 417
>gi|206889576|ref|YP_002249226.1| preprotein translocase subunit SecY [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206741514|gb|ACI20571.1| preprotein translocase, SecY subunit [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 435
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 202/426 (47%), Gaps = 32/426 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E+R R+ T ++ + RIG IP PG D + + +L G+V D GA K++
Sbjct: 15 ELRARVLFTLAMLAVFRIGAHIPTPGIDGEALSK-FLLERGGAVMGFFDIFTGGALSKVT 73
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE--AVI 141
F LG+ P I ASI+ Q+L ++PSL +L KEG +G +KI Y + ++ A ++ +
Sbjct: 74 IFALGVMPYISASIIFQLLTVVIPSLQKLAKEGEEGRKKITRYTRYATIVIAAIQGFGIA 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V S+ + ++T L G + W+ + I+E G G G SLII GI+
Sbjct: 134 VGLESMGGGQFIQEPGWSFRIITMITLTAGTAFLMWLGEQITEKGIGNGISLIIFAGIVA 193
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 261
+ ++ + + + + F+L L+ V V + + G R++ +QY A
Sbjct: 194 RFPNAIFYTYNLVRTGELSIF-FVLILIVVMVGVVAGIIFIERGQRRIPIQY-----AKR 247
Query: 262 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETS 321
Y+P IN +G+ P + + +L FP+ +A + P+ Q + + ++P +
Sbjct: 248 VVGKKMYGGYTTYLPLKINSAGVIPPIFASSVLMFPATVAGFIAVPWVQALAKQMSPGS- 306
Query: 322 VGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKI 379
+++ +Y + F F A + P EIA+ L K G I ++PG+ T EY+ ++
Sbjct: 307 -----FLHVILYVGLIIFFTYFYTAVIYNPVEIAENLQKNGGYITGIRPGQKTSEYIYRV 361
Query: 380 QASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE---------LR 430
+ F G L LS + IL + + F G TS+LI VG ++ +
Sbjct: 362 LSRLTFIGALYLSAVCVLPEIL---IAKFKVPFYFGGTSLLIAVGVALDTVSQIETHMIS 418
Query: 431 RSYQAY 436
RSY+ +
Sbjct: 419 RSYEGF 424
>gi|416181265|ref|ZP_11611561.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M13399]
gi|325135168|gb|EGC57794.1| preprotein translocase, SecY subunit [Neisseria meningitidis
M13399]
Length = 436
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 209/438 (47%), Gaps = 22/438 (5%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
++ S F +R LF+ LIV RIG IP+PG D + + Y S +G + L F
Sbjct: 6 TSSGSSKFGDLKKRLLFLFGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGILNMF 64
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
G+ + S F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++
Sbjct: 65 SGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGEAGRKVITKYTRYGTVLL 124
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
AIL+++ VA + I S HV T LV G M + W+ + I+E G G G SLI
Sbjct: 125 AILQSLGVASFVFQQGIVVTSSFEFHVS-TVVSLVTGTMFLMWLGEQITERGIGNGISLI 183
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY 253
I GI +G + K+++ S+ + + G ++ + VV E RK+ + Y
Sbjct: 184 ITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVFGALLLI--YLVVYFESAQRKIPIHY 241
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
K R S T ++PF +N +G+ P + + ++ FPS L GS V
Sbjct: 242 A--KRQFNGRAGSQNT----HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSADTNSVL 295
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
+ G +Y ++A V F F A + KE+A+ L K GA +P ++PG+
Sbjct: 296 HKIAGLLQHG--QLLYMALFAATVIFFCYFYTALVFSSKEMAENLKKSGAFVPGIRPGEQ 353
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIELR 430
T YL K+ +G L + T+ ++ +L + N F +G TS+LI+V ++
Sbjct: 354 TSRYLEKVVLRLTLFGALYI----TTICLIPEFLTTVLNVPFYLGGTSLLILVVVTMDFS 409
Query: 431 RSYQAYNVMPSLSKALRR 448
+Y + K + R
Sbjct: 410 TQINSYRLTQQYDKLMTR 427
>gi|378550959|ref|ZP_09826175.1| hypothetical protein CCH26_12759 [Citricoccus sp. CH26A]
Length = 435
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 207/433 (47%), Gaps = 32/433 (7%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGD 75
A F ++RR+++ T +IVI R+G F+P PG D + + Q S S +
Sbjct: 6 ARVFRTPDLRRKIWFTLGIIVIYRLGAFVPAPGVDYGAVQVCLDQGNTSGGLYSFVNMFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L++S F LGI P I A+I++Q+L ++P +L+KEG G K+ Y ++++
Sbjct: 66 GGAMLQVSIFALGIMPYITAAIIVQLLRVVIPRFEELQKEGAQGQSKLTQYTRYLTIALG 125
Query: 136 ILEAVIVACYSLPYSIYAAS------HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+L A +A + ++ + ++ V++ L G + + W+ + I+E G G
Sbjct: 126 LLNATTIASLARTGALLGCNLPIVPDDNLWTVLLLIVTLTTGTIVIMWLGELITEKGVGN 185
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRK 248
G SL+I + I G+ L ++ ++ W F G++ V ++T+ AVV V E R+
Sbjct: 186 GMSLLIFLSIAAGFPAGLGQIW-----TTQGWRVF--GIVLVVGLLTIMAVVFVEESQRR 238
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI----L 304
+ +QY A + YIP +N +G+ PV+ + ++ P IL
Sbjct: 239 IPVQY-----AKRQIGRRTVGGTTTYIPIKVNMAGVIPVIFASSIMMLPGILIQFNTPQD 293
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGAR 362
G+P Q V L+ G+ P VY T++ F F I P EI+D + K G
Sbjct: 294 GTPPPQWVI-FLSEYFGTGSHP-VYMTLFFLLTIGFTYFYVTITFNPVEISDNMKKYGGF 351
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP V+ G+ T YL + + F G L L +LA I L ++ F G S+LI+
Sbjct: 352 IPGVRAGRPTERYLEYVISRITFPGALYLGVLAMIPMI-AFVLINADQNFPFGGISILIM 410
Query: 423 VGSIIELRRSYQA 435
VG ++ + A
Sbjct: 411 VGVALQTIKQINA 423
>gi|421145997|ref|ZP_15605801.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395487605|gb|EJG08556.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 426
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 211/423 (49%), Gaps = 32/423 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 81
E+R R+ T ++ +++R+G IP PG D D LS ++ D L GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVD-----VDRLSSMASQSDVLSYINMFSGGAFTR 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGAG 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLIYNPGISFFVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 260
++ + + + G+ ++ +L L+ VT+ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTIQTMQGN--KFLIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
+ +IP +N +G+ PV+ + + P ++ + L P +K L+
Sbjct: 251 KGGMGE-----KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PSTLSIKTTLS--I 301
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTK 378
G VY +YA + F+ F A + P+++A+ L + G IP ++PG+ T+EYL
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFFYTALVFDPEKVAENLKQGGGTIPGIRPGEETVEYLEG 361
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQAY 436
+ + + GG+ L+I++ + Y+ + G + G T ++I+VG ++ + A+
Sbjct: 362 VASRITWGGGIFLAIIS-----ILPYVIFTSMGLPVYFGGTGIIIVVGVALDTIQQIDAH 416
Query: 437 NVM 439
VM
Sbjct: 417 LVM 419
>gi|237742652|ref|ZP_04573133.1| protein translocase subunit secY [Fusobacterium sp. 4_1_13]
gi|229430300|gb|EEO40512.1| protein translocase subunit secY [Fusobacterium sp. 4_1_13]
Length = 426
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 211/423 (49%), Gaps = 32/423 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 81
E+R R+ T ++ +++R+G IP PG D D LS ++ D L GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVD-----VDRLSSMASQSDVLSYINMFSGGAFTR 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGTG 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLIYNPGISFFVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 260
++ + + + G+ ++ +L L+ VT+ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTIQTMQGN--KFLIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
+ +IP +N +G+ PV+ + + P ++ + L P +K L+
Sbjct: 251 KGGMGE-----KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PSTLSIKTTLS--I 301
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTK 378
G VY +YA + F+ F A + P+++A+ L + G IP ++PG+ T+EYL
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFFYTALVFDPEKVAENLKQGGGTIPGIRPGEETVEYLEG 361
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQAY 436
+ + + GG+ L+I++ + Y+ + G + G T ++I+VG ++ + A+
Sbjct: 362 VASRITWGGGIFLAIIS-----ILPYVIFTSMGLPVYFGGTGIIIVVGVALDTIQQIDAH 416
Query: 437 NVM 439
VM
Sbjct: 417 LVM 419
>gi|392549259|ref|ZP_10296396.1| preprotein translocase subunit SecY [Pseudoalteromonas rubra ATCC
29570]
Length = 442
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 200/434 (46%), Gaps = 26/434 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
+E++RRL I+I R+G F+P+PG D ++ ++ G++ E+ + GA +
Sbjct: 16 AELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLA-EFFEQQKGTIVEMFNMFSGGALERA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI+MQ+L HI P++++L+KEG G +KI Y + +L A +++ +
Sbjct: 75 SVLALGIMPYISASIIMQLLTHIHPAMIELKKEGEQGRKKISQYTRYGTLVLATFQSIGI 134
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A +LP + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-NLPNMMDGLVVNPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
+ + ++ + VF VT V G R++ + Y A
Sbjct: 194 ANLPSAIGSTAEMARQGDLNVLALVVISVIVFA-VTYLVVFFERGQRRIVVNY-----AK 247
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQHVKE 314
+ ++P +N +G+ P + + ++ FP +AS G + F Q V
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVADFLQAVSA 307
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
+L P + A I+ F + +F+ P+E AD L K GA IP ++PG+ T +
Sbjct: 308 VLTPGQPLYAMVLAAAIIFFCFFYTALVFN----PRETADNLKKSGAFIPGIRPGEQTSK 363
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ K+ G L ++ + + + F G TS+LIIV I++ Q
Sbjct: 364 YIDKVMTRLTLAGALYITFICLVPEFMTMAWQ---TPFYFGGTSILIIVVVIMDFMAQVQ 420
Query: 435 AYNVMPSLSKALRR 448
+ + L++
Sbjct: 421 THLMSHQYDSVLKK 434
>gi|293375409|ref|ZP_06621690.1| preprotein translocase, SecY subunit [Turicibacter sanguinis PC909]
gi|325844410|ref|ZP_08168137.1| preprotein translocase, SecY subunit [Turicibacter sp. HGF1]
gi|292645962|gb|EFF63991.1| preprotein translocase, SecY subunit [Turicibacter sanguinis PC909]
gi|325489084|gb|EGC91468.1| preprotein translocase, SecY subunit [Turicibacter sp. HGF1]
Length = 426
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 210/419 (50%), Gaps = 24/419 (5%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSF 84
+++R+R+ T ++ ++ R+G +IP+P + ++ + + G +D L GA + S
Sbjct: 10 NADLRKRILFTLMIFIVYRLGSYIPVPTINTSVLEASAQTPMLGFIDTLSG-GALKRFSL 68
Query: 85 FQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F + ISP I ASI++Q+L ++P L + KEG G K+ +++L A ++A+ +A
Sbjct: 69 FAMSISPYITASIIIQLLQMDVIPILSEWAKEGETGKRKLNQLTRYVTLVLAFVQAITMA 128
Query: 144 C-YSLPYS-IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
+ L Y + SHS+ + A + G M ++ D I+ G G G+S+II GIL+
Sbjct: 129 IGFDLMYGGVLLESHSILTYLYIALTMTAGTAVMIFLADQITSKGIGNGTSMIIVAGILS 188
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFKLAS 260
L + ++ L + + ++T+ AV+ + RK+ +QY ++
Sbjct: 189 RVPYMLNDLYTKYLVNITLSNVLAFISVLALLLLTIIAVIYLQSATRKLPIQYANRHNSA 248
Query: 261 --AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL---GSPFWQHVKEI 315
+ R+DS +IP +N +G+ PV+ + L++ P + S L G W + I
Sbjct: 249 QLSGRKDS-------FIPLKLNSAGVIPVIFSVSLVSLPLTVVSFLPESGVTKW--ITTI 299
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEY 375
+ +G +Y + F + + ++ P+++A+ L K G+ IP V+PG T EY
Sbjct: 300 FDYTQPIGF--ILYVVLIVAFTYFYAFVQVS--PEKVAENLKKQGSYIPGVRPGADTEEY 355
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
L+K+ + F G + L ++A IL + + IG TS+LI+VG IE + Q
Sbjct: 356 LSKVLSRITFIGAIYLVVIA-GLPILFGAITDLPSSVEIGGTSLLIVVGVAIETAKQIQ 413
>gi|228472168|ref|ZP_04056934.1| preprotein translocase, SecY subunit [Capnocytophaga gingivalis
ATCC 33624]
gi|228276371|gb|EEK15095.1| preprotein translocase, SecY subunit [Capnocytophaga gingivalis
ATCC 33624]
Length = 442
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 207/423 (48%), Gaps = 24/423 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF--GAELKL 82
E+R R+ +T ++++ R G I LPG D ++L + G +D L F GA K
Sbjct: 15 EELRNRIILTIGILLVYRFGAHIILPGIDAKQLSSLTQKTSEGGLLDILNAFTGGAFAKA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI- 141
S F LGI P I ASI++Q++ +P L +L++EG G +I W+++ I++A
Sbjct: 75 SVFALGIMPYISASIVVQLMGIAIPYLQKLQQEGESGRRRINQITRWLTIAICIVQAPAY 134
Query: 142 ---VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
++ +P + + ++ + +LV G + W+ + I++ G G G SL+I VG
Sbjct: 135 LYSISALGVPEEAFIQGKGLGFIIPSVIILVTGTIFAMWLGEKITDKGVGNGISLLIMVG 194
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ + ++++ + +L LL V + + +T R++ +QY +
Sbjct: 195 IIARMPHAFFGEMNRVHSPMIVIVEILLWLL-----VILGCIFLTLAVRQIPVQYA--RR 247
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
+ + + I YIP +N +G+ P++ ++ P+ LA + S + ++
Sbjct: 248 TTGGQVEKNIFGARQYIPLKLNSAGVMPIIFAQAIMFVPAALAGLSKSDWALSIQNAFRS 307
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIA-NLP-KEIADYLNKMGARIPNVKPGKATIEYL 376
W Y ++ F + +F F A +P ++AD L + G IP VKPG+ T +YL
Sbjct: 308 PFEF----W-YNVLFGFLIIIFTYFYTAITVPSNKMADDLKRNGGFIPGVKPGQETSDYL 362
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHY-LRRINEGFSI--GFTSVLIIVGSIIELRRSY 433
KI + F G L L +A +++ L I++ +++ G TS+LI+VG I+ +
Sbjct: 363 DKIMSLITFPGSLFLVAIAVLPAVVNKLPLLEIDQQWALFYGGTSLLILVGVAIDTMQQV 422
Query: 434 QAY 436
+Y
Sbjct: 423 NSY 425
>gi|193214820|ref|YP_001996019.1| preprotein translocase subunit SecY [Chloroherpeton thalassium ATCC
35110]
gi|193088297|gb|ACF13572.1| preprotein translocase, SecY subunit [Chloroherpeton thalassium
ATCC 35110]
Length = 442
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 205/430 (47%), Gaps = 36/430 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
E+R R+ T +L+V+ R+G I +PG D + + + D G F GA +
Sbjct: 15 ELRDRIVYTILLLVVYRVGSHITIPGVDASAVAAASQAPSN---DLFGLFDLFVGGAFKR 71
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-- 139
S F LGI P I ++I++Q+L + P +L+KEG +G KI Y + ++ A ++A
Sbjct: 72 ASVFALGIMPYISSAIIIQLLGAVTPYFQKLQKEGEEGRRKINQYTRYGTVVIAAMQAWG 131
Query: 140 --VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
V +A S + + T +L + W+ + I+E G G G SL+I +
Sbjct: 132 VSVSLASPSSFGQPIVPDPGLFFTISTVIMLTASTIFAMWLGERITERGIGNGISLLIMI 191
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY---- 253
GIL + ++L Q + + W + +L + + V++T G R++ +QY
Sbjct: 192 GILARFPQSLVAEF-QSVSMGNKNWIVEVVILAIMVAIVAGVVLLTVGTRRIPVQYAKRV 250
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
G K+ + + YIP IN +G+ P++ ++ PS + S F+ +
Sbjct: 251 VGRKVYGGSMQ---------YIPMRINTAGVMPIIFAQSIMFVPSTIVS-----FFPESE 296
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKA 371
+ + + W Y I+ + F F IA PK++AD + + G IP V+PGK+
Sbjct: 297 TMQQVASFIAYDSWGYALIFGLMIVFFTYFYTAIAFNPKDVADTMQRQGGFIPGVRPGKS 356
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--IGFTSVLIIVGSIIEL 429
T +++ I G + L+I+A TIL + + GF+ G TS+LIIVG ++
Sbjct: 357 TSDFIDNILTKITLPGAISLAIIAILPTILTKF-GNVTPGFAHFFGGTSLLIIVGVALDT 415
Query: 430 RRSYQAYNVM 439
+ +++ +M
Sbjct: 416 LQQVESHLLM 425
>gi|443625120|ref|ZP_21109571.1| putative protein translocase subunit SecY [Streptomyces
viridochromogenes Tue57]
gi|443341383|gb|ELS55574.1| putative protein translocase subunit SecY [Streptomyces
viridochromogenes Tue57]
Length = 437
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 209/440 (47%), Gaps = 34/440 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDE 72
+L A +F ++R++L T +IVI R+G +P+PG D + D S G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVIYRVGTHVPIPGVDYTAVQVCVDQASANQGIFGL 60
Query: 73 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ F GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYL 120
Query: 131 SLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDT 181
++ AIL+ + + +++ S+ MV + G + W+ +
Sbjct: 121 TVALAILQGTGLVATARSGALFQGCPVAGQIVPDRSIFTTMVMVITMTAGTALVMWLGEL 180
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
I++ G G G S+++ + I + L+ + + GS W ++ V ++ V
Sbjct: 181 ITDRGIGNGMSILMFISIAATFPAALWAIKQE--GSLADGWIEFGTVILVGLVMVGLVVF 238
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++A
Sbjct: 239 VEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIA 293
Query: 302 SIL-GSPFW-----QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADY 355
G+ W QH+ + +P V Y+ + FF F + I+ P+E+AD
Sbjct: 294 QFAGGTSGWKTWIEQHLVQGNHPYYIVS-----YFLLIVFFAFFY--VAISFNPEEVADN 346
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
+ K G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G
Sbjct: 347 MKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGA-NQNFPFG 405
Query: 416 FTSVLIIVGSIIELRRSYQA 435
TS+LIIVG +E + ++
Sbjct: 406 GTSILIIVGVGLETVKQIES 425
>gi|357236752|ref|ZP_09124095.1| preprotein translocase, SecY subunit [Streptococcus criceti HS-6]
gi|356884734|gb|EHI74934.1| preprotein translocase, SecY subunit [Streptococcus criceti HS-6]
Length = 434
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 220/441 (49%), Gaps = 52/441 (11%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD-------RRLIPQDYLSFVSGSVDEL 73
E+ +RR++F T +I++ RIG +I +PG + + L + L+ +SGS +
Sbjct: 8 EALRLKNVRRKIFFTIFMILVFRIGAYITVPGVNATSLENMKDLPFLNMLNLISGSA--M 65
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G F S F LG+SP I ASI++Q+L I P V+ K+G G K+ +ISL
Sbjct: 66 GSF------SIFALGVSPYITASIVVQLLQMDIYPRFVEWSKQGEVGRRKLNQATRYISL 119
Query: 133 GFAILEAV-IVACYS-LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A +++V I A ++ L S A+ + + + +L G + ++W+ D I++ GFG G
Sbjct: 120 VLAFIQSVSITAGFNILASSKLLANPNPRTFAMVGLILTTGTVIVTWLGDQITDKGFGNG 179
Query: 191 SSLIICVGILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFT--IVTMWAV 240
S+II GI+ Y E + S + +S + +GLL +F I+ +
Sbjct: 180 VSMIIFAGIIAQIPSAIKSIYNEYFVNIESGQMTNSFIY----VGLL-IFAVLIIVFFTT 234
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + ++ +QY KL A S Y+P +NP+G+ PV+ + + A PS +
Sbjct: 235 FVQQAEYQIPIQYT--KLVQGAPTSS-------YLPLKVNPAGVIPVIFASSITAAPSSI 285
Query: 301 ASILGS-----PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADY 355
+ L S P+ +++E+ + ++ G +Y + A F F + + P++ A+
Sbjct: 286 ITFLQSTNINLPWLDNLQELFSYQSPTGMA--IYAVLIALFSFFYTFVQVN--PEKTAEN 341
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
L K A IP+V+PG+ T +YL+ + G L L+ +A I+ + ++ ++G
Sbjct: 342 LQKNAAYIPSVRPGRETEQYLSSLLKKLATIGSLFLAFIALIP-IIAQQMFNLSSTVALG 400
Query: 416 FTSVLIIVGSIIELRRSYQAY 436
TS+LI++ + IE + + Y
Sbjct: 401 GTSLLILISTGIEGMKQLEGY 421
>gi|229815752|ref|ZP_04446077.1| hypothetical protein COLINT_02801 [Collinsella intestinalis DSM
13280]
gi|229808668|gb|EEP44445.1| hypothetical protein COLINT_02801 [Collinsella intestinalis DSM
13280]
Length = 428
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 201/434 (46%), Gaps = 45/434 (10%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS----FVSGSV 70
+L +F E+R ++ T ++V+ RIG +P+PG + + + S F SG++
Sbjct: 1 MLTGLKNTFRIKELRGKILFTIAMLVVYRIGAHVPVPGIPFQAMSGLFQSAGDTFASGAM 60
Query: 71 DELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
L F GA +S F LGI P I +SI+MQ+L +VPSL +L +EG G KI Y
Sbjct: 61 ALLNLFSGGALSYVSVFSLGIMPYITSSIIMQMLQAVVPSLHELAREGEVGQTKITQYSR 120
Query: 129 WISLGFAILEAV----IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+++LG A+L +V + + + ++ A + +M+ L GAM + WI + I++
Sbjct: 121 YLTLGLALLNSVGYLFLFKSFGIQFNGAGAPEIIFDIMIVG-TLTAGAMLIMWIGELITQ 179
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT- 243
G G G SLII I+ G + +++ + G +GV T + + V++
Sbjct: 180 RGIGNGMSLIIFANIMAGLPQAIFQSIEG-------------GNMGVITTLVILVVILCV 226
Query: 244 --------EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLA 295
G R++ +QY A + Y+P +N +G+ P++ + LL
Sbjct: 227 IPFIVYLERGQRRIPVQY-----AKRVVGRRIMGGQSTYLPIKVNTAGVIPIIFASALLY 281
Query: 296 FPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADY 355
FP+ LA + W S G W+ + F F + N P E A+
Sbjct: 282 FPAQLAVFFPNVGWMQA---FAGALSSGWINWILNVVLIVFFAYFYTSMVFN-PDETAEN 337
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRR-INEGFSI 414
L K G IP V+PGK T Y+ + L+ +A +I+ + + + F
Sbjct: 338 LKKQGGFIPGVRPGKQTAHYIKNALNKITLPSAIFLACIAIVPSIVFSFTNNALIQAF-- 395
Query: 415 GFTSVLIIVGSIIE 428
G TSVLI+VG +++
Sbjct: 396 GGTSVLIMVGVVMD 409
>gi|406035426|ref|ZP_11042790.1| preprotein translocase subunit SecY [Acinetobacter parvus DSM 16617
= CIP 108168]
Length = 452
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 206/426 (48%), Gaps = 30/426 (7%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR +F+ L+V R+G IPLPG D + Q F + LG F GA
Sbjct: 23 YREIIRRLMFLIGALLVF-RLGAHIPLPGIDNVALAQ---FFKANEGTFLGLFNMFSGGA 78
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y + +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRYGTLLLALVQ 138
Query: 139 AVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
V + + I S +V VT+ LV G M + W+ + I+E G G G S+II
Sbjct: 139 GVGMCAGLISQGITLTSGLAFYVPAVTS--LVAGTMFLMWLGEQITERGIGNGISMIIFA 196
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGF 256
GI+ G + + S + + + L + G+ ++ + A+V E R++ + Y
Sbjct: 197 GIVAGLPNLVIQSFSSV--HNGQGSLIGLAVFGLLSLAVLAAIVFIEKAQRRIPVNY--- 251
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS--PFWQHVKE 314
A + T + ++P IN +G+ P + + LL FP+ L LGS P VK
Sbjct: 252 --AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGIVKR 309
Query: 315 ILNPETSV--GARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGK 370
L V +P +Y ++ + F F A + PKE+++ L + GA +P ++PG+
Sbjct: 310 SLQDLALVLSPGQP-LYLMLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGE 368
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
T YL I F G + ++++ +L F +G TS+LI+V +++
Sbjct: 369 QTARYLDHILNRLTFIGAIYITVVCLMPMVLQ---SSFGIPFHLGGTSLLIVVVVVMDFM 425
Query: 431 RSYQAY 436
QA+
Sbjct: 426 AQLQAH 431
>gi|409097745|ref|ZP_11217769.1| preprotein translocase subunit SecY [Pedobacter agri PB92]
Length = 446
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 206/419 (49%), Gaps = 19/419 (4%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 85
E++ R+ T +++++ R + LPG D + + S + G +D G+ ++S
Sbjct: 15 QELKERILFTLLILLVYRFVSHVVLPGVDPTALGTNEKSGLLGILDMFAG-GSFSRVSIL 73
Query: 86 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACY 145
LG+ P I ASI++Q+L VPS +++KEG G +K+ ++++ I+++V
Sbjct: 74 ALGVMPYISASIVVQLLGIAVPSFQKMQKEGESGRKKMNQITRYLTVAITIVQSVGYVKT 133
Query: 146 SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 205
+P +++ V+ T F+L G + + W+ + I++ G G G+SLII VGI+
Sbjct: 134 QVPAEAILLPNTLFLVLST-FVLTAGTLFVMWLGEKITDKGIGNGTSLIIMVGIIARLPI 192
Query: 206 TLYKMLSQLLGSSVRWW---PFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
+ + S +GS+ +L ++ +F +V M+ +++ +G RKV +QY A
Sbjct: 193 AISQEFSARVGSASEGGGPVALVLEIVALFAVV-MFTILIVQGVRKVPVQY-----AKKI 246
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSV 322
+ V YIP +N +G+ P++ L+ P L + S + + N +
Sbjct: 247 VGNRQFGGVRQYIPLKVNAAGVMPIIFAQALMFIPGALTQFVPSLQGSWLIQFSNTTS-- 304
Query: 323 GARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQ 380
Y +AF + F F I P +++D + K G IP VKPG AT ++ +
Sbjct: 305 ----LAYSLTFAFLIIAFTFFYTAITVNPTQMSDDMKKNGGFIPGVKPGFATSTFIDDVI 360
Query: 381 ASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
+ F G + L+I+A +I + + G TS+LI+VG +++ + ++Y +M
Sbjct: 361 SKITFPGAVFLAIIAILPSIAVKFGIKQEFAHFFGGTSLLILVGVVLDTLQQIESYLLM 419
>gi|390952400|ref|YP_006416159.1| protein translocase subunit secY/sec61 alpha [Thiocystis violascens
DSM 198]
gi|390428969|gb|AFL76034.1| protein translocase subunit secY/sec61 alpha [Thiocystis violascens
DSM 198]
Length = 450
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 197/421 (46%), Gaps = 23/421 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+E++RRL +++ RIG F+P+PG + + + +D F GA + S
Sbjct: 19 TELKRRLLFLLGALLVYRIGTFVPVPGVNPEALAILFDQNQGSILDMFNMFSGGALERAS 78
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LG+ P I ASI++Q++ +VP L QL+KEG G KI Y + ++ A +A+ ++
Sbjct: 79 LFALGVMPYISASIIIQLMTSVVPQLEQLKKEGESGRRKITQYTRYGTVFLATFQAIGIS 138
Query: 144 CYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+L S V H V A LV G M + W+ + I+E G G G S+II G
Sbjct: 139 M-ALQGQTAGGSALVVHGGIGFVFTAAVSLVTGTMFLMWLGEQITERGIGNGISMIIFAG 197
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ G L L +L + +L L + VT + V V G R++ + Y
Sbjct: 198 IVAGLPAALGGTL-ELARTGEMNSLAVLALFAMALAVTAFVVFVERGQRRITVNY----- 251
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
A + + ++P +N +G+ P + + +L FP L G+ ++++ I N
Sbjct: 252 ARRQQGRKMMQAQSTHLPLKLNMAGVIPPIFASSILLFPGTLGQFFGAN--ENLRWIANI 309
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYL 376
+ + +Y Y + F F A + PKE AD L + GA IP ++PG+ T Y+
Sbjct: 310 TSKLAPGEPLYVVFYTVAIVFFCFFYTALVFNPKETADNLKRSGAFIPGIRPGEQTARYI 369
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
+ G +I T+ +L +L N F G TS+LI+V +++ QA
Sbjct: 370 DSVMTRLTAAG----AIYITTVCLLPEFLIVGYNVPFYFGGTSLLIVVVVVMDFMAQVQA 425
Query: 436 Y 436
+
Sbjct: 426 H 426
>gi|269128496|ref|YP_003301866.1| preprotein translocase subunit SecY [Thermomonospora curvata DSM
43183]
gi|268313454|gb|ACY99828.1| preprotein translocase, SecY subunit [Thermomonospora curvata DSM
43183]
Length = 432
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 197/428 (46%), Gaps = 37/428 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F ++R++L T +IVI RIG +P P + I + S G ++
Sbjct: 1 MLTAIVRAFRTPDLRKKLLFTLFIIVIFRIGSQLPTPNVNTEAIREAVESAREGDQSQIY 60
Query: 75 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
GA L+LS F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 GLVDLFSGGALLQLSVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTNKITQYTR 120
Query: 129 WISLGFAILEAVIVACYSLPYSIY--AASHSVKH------VMVTAFLLVCGAMTMSWICD 180
++++G AIL+A + + +++ AA V + ++ ++ G + W+ +
Sbjct: 121 YLTIGLAILQATGIVAMAATGNLFQGAAVGDVLYKTDLFSIITMVVVMTAGTSVIMWLGE 180
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I++ G G G S++I +T+ + +Q F L+ V + M V
Sbjct: 181 LITDRGIGNGMSILI-------FTQVVAVFPAQFWAIYTSKGAFAFALVLVVGLAIMAGV 233
Query: 241 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V V + R++ +QY A YIP +N +G+ PV+ + LL P
Sbjct: 234 VFVEQAQRRIPVQY-----AKRMVGRRMYGGTSTYIPLKVNQAGIIPVIFASSLLYLP-- 286
Query: 300 LASILGSPFWQHVKEILNPETSVGA-RPWVYYTIYAFFVFLFNIFDIANL--PKEIADYL 356
+L + W K ++ + + PW + F +F F F +A P E+AD +
Sbjct: 287 ---VLATQLWPENKWMIKLQPYLQQDNPWHMAVFFGFIIF-FTYFYVAITFNPTEVADNM 342
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++PG+ T EYL + G L L +++ + L+ N+ F G
Sbjct: 343 KKYGGFIPGIRPGRPTAEYLDYVLTRITTPGALYLGLVSLIPMVAFALLKATND-FPFGG 401
Query: 417 TSVLIIVG 424
TS+LI+VG
Sbjct: 402 TSILIVVG 409
>gi|255348887|ref|ZP_05380894.1| preprotein translocase subunit SecY [Chlamydia trachomatis 70]
gi|255503427|ref|ZP_05381817.1| preprotein translocase subunit SecY [Chlamydia trachomatis 70s]
gi|255507105|ref|ZP_05382744.1| preprotein translocase subunit SecY [Chlamydia trachomatis
D(s)2923]
gi|385241892|ref|YP_005809732.1| preprotein translocase subunit SecY [Chlamydia trachomatis E/11023]
gi|385245499|ref|YP_005814322.1| preprotein translocase subunit SecY [Chlamydia trachomatis E/150]
gi|386262867|ref|YP_005816146.1| protein translocase subunit [Chlamydia trachomatis Sweden2]
gi|389858206|ref|YP_006360448.1| protein translocase subunit [Chlamydia trachomatis F/SW4]
gi|389859082|ref|YP_006361323.1| protein translocase subunit [Chlamydia trachomatis E/SW3]
gi|389859958|ref|YP_006362198.1| protein translocase subunit [Chlamydia trachomatis F/SW5]
gi|289525555|emb|CBJ15033.1| protein translocase subunit [Chlamydia trachomatis Sweden2]
gi|296435115|gb|ADH17293.1| preprotein translocase subunit SecY [Chlamydia trachomatis E/150]
gi|296438835|gb|ADH20988.1| preprotein translocase subunit SecY [Chlamydia trachomatis E/11023]
gi|380249278|emb|CCE14571.1| protein translocase subunit [Chlamydia trachomatis F/SW5]
gi|380250153|emb|CCE13682.1| protein translocase subunit [Chlamydia trachomatis F/SW4]
gi|380251031|emb|CCE12793.1| protein translocase subunit [Chlamydia trachomatis E/SW3]
gi|440527218|emb|CCP52702.1| preprotein translocase subunit SecY [Chlamydia trachomatis
D/SotonD1]
gi|440529892|emb|CCP55376.1| preprotein translocase subunit SecY [Chlamydia trachomatis
E/SotonE4]
gi|440530791|emb|CCP56275.1| preprotein translocase subunit SecY [Chlamydia trachomatis
E/SotonE8]
gi|440531682|emb|CCP57192.1| preprotein translocase subunit SecY [Chlamydia trachomatis
F/SotonF3]
gi|440535259|emb|CCP60769.1| preprotein translocase subunit SecY [Chlamydia trachomatis E/Bour]
Length = 457
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 222/459 (48%), Gaps = 45/459 (9%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 76
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLIVFMPTLQREMRESPDQGKRKLGRMTRLFTLVL 125
Query: 135 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A ++L P + A S+K + T ++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMTTGTLLLMWVGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF----MLGLLGVFTIVTM 237
IS+ G G G SLII +GIL + L + ++L S F +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGILASFPSVLGSIFNKLNLGSQDPSEFGIVSLLILCAVFVFVLM 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVLTTTYLL 294
V++ EG RK+ +Q+ AR EV Y+P +N +G+ PV+ + LL
Sbjct: 246 ATVLIIEGVRKIPVQH--------ARRIIGRREVVGGGSYLPLKVNYAGVIPVIFASSLL 297
Query: 295 AFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PK 350
FP+ + L S + + + +L+P + Y Y + F F A P+
Sbjct: 298 MFPATIGQFLSSESSWLKRIATMLSPGSV------AYSIFYVLLIIFFTYFWTATQFRPE 351
Query: 351 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RIN 409
+IA + K GA IP ++ GK T YL G + L+++A +IL LR N
Sbjct: 352 QIASEMKKNGAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVVAILPSILGRILRVDAN 411
Query: 410 EGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+ +G T++LI+VG I++ + A+ ++ L++
Sbjct: 412 VSYFLGGTAMLIVVGVILDTMKQIDAFLLVRRYDGVLKK 450
>gi|345021311|ref|ZP_08784924.1| preprotein translocase subunit SecY [Ornithinibacillus scapharcae
TW25]
Length = 429
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 205/419 (48%), Gaps = 22/419 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF--VSGSVDELGDFGAELKLS 83
++IRR++ T +++++ R+G FIP+P D+ I D+++ V G +D G GA S
Sbjct: 12 ADIRRKIIFTLLMLIVFRLGTFIPVPFTDKSAI--DFMNSQNVFGFLDTFGG-GALQNFS 68
Query: 84 FFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI- 141
F +GI P I ASI+MQ+L +VP + +K+G G +K+ + ++ A ++A+
Sbjct: 69 IFAMGIMPYITASIIMQLLQMDVVPKFTEWKKQGEMGRKKLAQITRYGTVVLAFVQAIAM 128
Query: 142 -VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ ++ + A+ +V A +L G + W+ + I+ +G G G S++I GI+
Sbjct: 129 SIGFNAMAGGMLIANPGPVKFLVIALVLTAGTTFLMWLGEQITANGVGNGISILIFAGIV 188
Query: 201 TGYTETLYKMLSQLL---GSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGF 256
+ ++ Q G + ++ ++ + + +T+ + V + RK+ +QY
Sbjct: 189 AAIPNAVEQLYVQYFTNPGDELFINIVIVAIIALVAVAITVGVIFVNQALRKIPIQY--- 245
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
A SP+ ++P +N +G+ PV+ + PS +A+ + EI
Sbjct: 246 --AKKLVNRSPVGGHSTHLPLKVNAAGVIPVIFAIAFIMAPSTVANFFEGNVAATITEIF 303
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
+ VG +Y T+ F + + + P+++A+ L K G IP ++PGK T YL
Sbjct: 304 DYTKPVGM--LIYVTLIIAFTYFYTFVQVN--PEQMAENLQKQGGYIPGIRPGKNTETYL 359
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
T++ F G + L+ ++ + L + + IG TS+LI+VG I+ + +
Sbjct: 360 TRVMNRLTFVGAIFLAAISVLPIVFGK-LAGLPQAVQIGGTSLLIVVGVAIQTMKQLEG 417
>gi|123969279|ref|YP_001010137.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
AS9601]
gi|123199389|gb|ABM71030.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
AS9601]
Length = 439
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 216/453 (47%), Gaps = 49/453 (10%)
Query: 6 FLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF 65
F+N R S ++ F E+R R+ T L+++ R+G +IP+P DR + SF
Sbjct: 2 FVNKSRNPSASEILSQLFLNKELRSRVLTTLGLLLLVRLGIYIPMPSIDRV----AFKSF 57
Query: 66 VSGSVDELG-----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDG 119
+ +G G L F LGI P I ASI++Q+L +P L L+K EG G
Sbjct: 58 IDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIIIQLLTASLPFLEDLQKNEGEAG 117
Query: 120 HEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWIC 179
KI ++SLG+ L+++I + Y+I S + V+ T+ LV G+M + W
Sbjct: 118 RRKIAQITRYVSLGWGFLQSIIFSLILRQYAIEGISETT-FVLQTSIALVTGSMLVMWFS 176
Query: 180 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQ--------LLGSSVRWWPFMLGLLGV 231
+ I+E G GQG+SL+I + I++ + L + + +LG +V LLGV
Sbjct: 177 EIITEKGIGQGASLVIFLNIVSTLPKALSSTIEKAQTGDRGDVLGIAV--------LLGV 228
Query: 232 FTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVL 288
F + + + V EG R++ + SA R+ T + + Y+P +N G+ P++
Sbjct: 229 FLLTIVGIIFVQEGARRI-------PIVSAKRQIGNTTLLPTRQSYLPLKLNAGGVMPII 281
Query: 289 TTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIA 346
+ L+ P +A++ G+P + LNP +S PW Y + + F+ F +
Sbjct: 282 FASALIFLPITIANVTGNPVLIKLASSLNPGSS---NPWPYALTFFSLILGFSYFYASLT 338
Query: 347 NLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR 406
P ++A L K G IP V+PG T YL+ IQ LL + S I+ +
Sbjct: 339 INPVDVASNLKKGGVAIPGVRPGTNTANYLSGIQNRLT----LLGGLFLGSVAIIPAAVE 394
Query: 407 R---INEGFSIGFTSVLIIVGSIIELRRSYQAY 436
R + +G TS+LI+VG I+ + Q Y
Sbjct: 395 RATNVQTFQGLGATSLLILVGVAIDTAKQIQTY 427
>gi|387928090|ref|ZP_10130768.1| preprotein translocase subunit SecY [Bacillus methanolicus PB1]
gi|387587676|gb|EIJ79998.1| preprotein translocase subunit SecY [Bacillus methanolicus PB1]
Length = 431
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 205/428 (47%), Gaps = 38/428 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP-QDYLSFVSGSVDELGDFGAELKLSF 84
EIRR++ T ++++ RIG FIP+P + ++ QD L+ V G ++ G GA S
Sbjct: 12 GEIRRKILFTLFMLIVFRIGAFIPVPNVNAEILKVQDELN-VFGVLNTFGG-GALKNFSI 69
Query: 85 FQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F +GI P I ASI++Q+L +VP + K+G G K+ + + ++ +++A
Sbjct: 70 FAMGIMPYITASIIVQLLQMDVVPKFTEWSKQGEVGRRKLAQFTRYFTIVLGLIQA---- 125
Query: 144 CYSLPYSIYAASHS--VKHVMVTAFLLVC-----GAMTMSWICDTISESGFGQGSSLIIC 196
+ + Y S +K+ +T +LL+ G + W+ + I+ G G G S+II
Sbjct: 126 -FGMSYGFNNMSRGMLIKNPGITTYLLIAIVLTAGTAFLMWLGEQITAKGVGNGISIIIF 184
Query: 197 VGILTGYTETLYKMLSQLLGSS-----VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
GI+ G T ++ +Q ++ +R +L +L V I+ + + + + RK+ +
Sbjct: 185 AGIVAGIPSTFNQIYAQQFENAGEQLFLRIIIVVLIVLAVIAII-VGVIFIQQALRKIPI 243
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---PF 308
QY K +A R +P ++P +N +G+ PV+ + P +AS G
Sbjct: 244 QYA--KRMAAGR--NPAVGQSTHLPLKVNSAGVIPVIFAVSFIVTPPTIASFFGQNDVTL 299
Query: 309 W-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVK 367
W Q + NP + Y + F + + + P+++A+ L K G IP ++
Sbjct: 300 WIQKTFDYTNPIGMI-----FYVALIVAFTYFYAFIQVN--PEQVAENLKKQGGYIPGIR 352
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PGK T EYLT++ G L L+ +A + + + IG TS+LI+VG +
Sbjct: 353 PGKNTQEYLTRVLYRLTLVGSLFLAFIAVLPVFFIKF-AGLPQSAQIGGTSLLIVVGVAL 411
Query: 428 ELRRSYQA 435
E + +A
Sbjct: 412 ETMKQLEA 419
>gi|319942193|ref|ZP_08016509.1| preprotein translocase subunit secY [Sutterella wadsworthensis
3_1_45B]
gi|319804246|gb|EFW01138.1| preprotein translocase subunit secY [Sutterella wadsworthensis
3_1_45B]
Length = 441
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 202/432 (46%), Gaps = 25/432 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+++ RL A+ +V+ RIG +P+PG D ++ Q + G + F GA + S
Sbjct: 17 GDLKGRLIFLALALVVYRIGAHVPVPGIDPDMLNQLFNQQQGGILGLFNMFSGGALSRFS 76
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE--AVI 141
F LGI P I ASI+ Q+L +++PSL +RKEG G KI Y + +L + + +
Sbjct: 77 VFALGIMPYISASIIFQMLSYVLPSLEAIRKEGEQGRRKITQYTRYGTLALGLFQGFGIA 136
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
VA + P + + + T L+ G M + W+ + I+E G G G S+II GI+
Sbjct: 137 VALETQPGLVIDPGFLFR--ITTTVSLLTGTMFLMWLGEQITERGLGNGISIIIFAGIVA 194
Query: 202 GY---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
G L++++S S + ++ +LG VT + V V G R++ + Y ++
Sbjct: 195 GLPNGASGLFQLVSTGAISPLAAIFVIVIVLG----VTAFCVFVERGQRRITVNYAKRQV 250
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
+ Y+P +N SG+ P + + L+ FP+ LA S + I +
Sbjct: 251 GNRIYGGQ-----SSYLPLKMNMSGVIPPIFASSLILFPATLAGWFTS--GDSTRWIRDL 303
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYL 376
++ +Y +YA + F F A + PKE A+ L K GA IP ++PG+ T Y+
Sbjct: 304 AAALSPGQPLYTLLYAALIVFFAYFYTALVFNPKETAENLKKSGAFIPGIRPGEQTARYI 363
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
++ G + L + L+ R N F G TS+LI+V ++ QAY
Sbjct: 364 DRVLLRLTLGGAIYLVFVCLVPEFLNL---RFNVPFYFGGTSLLIVVVVTMDFMSQVQAY 420
Query: 437 NVMPSLSKALRR 448
+ LR+
Sbjct: 421 MMSHQYENLLRK 432
>gi|262370558|ref|ZP_06063883.1| secretion protein [Acinetobacter johnsonii SH046]
gi|381197889|ref|ZP_09905228.1| preprotein translocase subunit SecY [Acinetobacter lwoffii WJ10621]
gi|262314358|gb|EEY95400.1| secretion protein [Acinetobacter johnsonii SH046]
Length = 452
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 210/432 (48%), Gaps = 42/432 (9%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR +F+ L+V R+G IP+PG + + ++ + G++ LG F GA
Sbjct: 23 YREIIRRMMFLIGALLVF-RLGAHIPVPGINNAAL-ENLFNANQGTI--LGLFNMFSGGA 78
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLFLALVQ 138
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A I C L + + + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 A-IGMCAGLISQGITLTAGLAFYVPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAG 197
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 255
I+ G L ++ Q + S ++GL+ GV ++ + A+V E R++ + Y
Sbjct: 198 IVAG----LPNLILQSISSVDNGQTSLIGLVIFGVLSLAVLAAIVFIEKAQRRIPVNY-- 251
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP-------- 307
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ---AQKQQGRRVFTAQQSHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGIIK 308
Query: 308 -FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
Q + +L+P +P +Y ++ + F F A + PKE+++ L + GA +P
Sbjct: 309 RSLQDLALVLSP-----GQP-LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVP 362
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG+ T YL I F G + ++I+ IL FS+G TS+LI+V
Sbjct: 363 GIRPGEQTARYLDHILNRLTFIGAIYITIICLMPMILQ---SSFGIPFSLGGTSLLIVVV 419
Query: 425 SIIELRRSYQAY 436
+++ QA+
Sbjct: 420 VVMDFMAQLQAH 431
>gi|284033982|ref|YP_003383913.1| preprotein translocase subunit SecY [Kribbella flavida DSM 17836]
gi|283813275|gb|ADB35114.1| preprotein translocase, SecY subunit [Kribbella flavida DSM 17836]
Length = 433
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 198/427 (46%), Gaps = 34/427 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++RR++ ++VI RIG +P PG + + + +G+ L
Sbjct: 1 MLGAFANAFKTPDLRRKILFVLFIVVIFRIGSVVPAPGVNVQSLDVCLRQSQTGANANLY 60
Query: 75 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
+ GA L+L+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 NLINLFSGGALLQLAIFALGIMPYITASIILQLLTVVIPRLESLKKEGQAGQGKITQYTR 120
Query: 129 WISLGFAILEAV-IVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICD 180
++++G AIL+A VA P ++ S V V+V + G + W+ +
Sbjct: 121 FLTVGLAILQATAFVALARTPGRLFQGCDLPLLHSDKVFPVVVMVLTMTAGTGVVMWLGE 180
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I++ G G G S++I I+ + L+ + R L ++ + ++ +
Sbjct: 181 LITDRGVGNGMSILIFTQIVATFPTQLWAIRKD------RGVGTFLVVIAIGLVIVAAVI 234
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
+ + R++ +QY A YIP +N +G+ PV+ + L+ P ++
Sbjct: 235 FIEQAQRRIPVQY-----AKRMVGRKMFGGTSTYIPLKVNQAGVIPVIFASSLMYLPVLV 289
Query: 301 ASILGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLN 357
+ W Q ++ L V W+Y Y + F F I PKE+AD +
Sbjct: 290 SQFRQEEKWAQWIQANL-----VRGDHWIYMVTYVALIIFFTYFYVSITFNPKEVADNMK 344
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++ G+ T EYL+ + + G + L+I++ ++ L ++ F G T
Sbjct: 345 KYGGFIPGIRAGRPTEEYLSYVLSRITLPGAIYLAIVSMIP-LIALVLLNASQNFPFGGT 403
Query: 418 SVLIIVG 424
S+LI+VG
Sbjct: 404 SILIMVG 410
>gi|23097594|ref|NP_691060.1| preprotein translocase subunit SecY [Oceanobacillus iheyensis
HTE831]
gi|22775817|dbj|BAC12095.1| preprotein translocase subunit [Oceanobacillus iheyensis HTE831]
Length = 430
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 205/420 (48%), Gaps = 23/420 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVDELGDFGAELKLS 83
++IR ++ T +++++ RIG FIP+P D+ I D+++ V G ++ G GA S
Sbjct: 12 ADIRNKIIFTLLMLIVFRIGTFIPVPFTDKAAI--DFMNEQNVFGFLNTFGG-GALQNFS 68
Query: 84 FFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI- 141
F +GI P I ASI+MQ+L +VP + +K+G G +KI + ++ A ++A+
Sbjct: 69 IFAMGIMPYITASIIMQLLQMDVVPKFAEWKKQGEMGRKKIAQVTRYGTIVLAFVQAIAM 128
Query: 142 -VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
V ++ + A +V + A +L G + W+ + I+ G G G S+II GI+
Sbjct: 129 SVGFNAMAGGMLIADPNVMKFLTIAIVLTGGTAFLMWMGEQITAHGVGNGISIIIFAGIV 188
Query: 201 TGYTETLYKMLSQLL---GSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGF 256
+ ++ SQ G+ + ++ L+ + + VT+ + V + RK+ +QY
Sbjct: 189 AAVPNGVGQLYSQYFSNPGNDLFINIVIVALIALVAVAVTVGVIFVNQALRKIPVQY--- 245
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEI 315
A SP+ ++P +N +G+ PV+ + P+ +A G+ +
Sbjct: 246 --AKKLVNRSPVGGQSTHLPIKVNAAGVIPVIFAIAFMMAPTTIAGFFEGNQVADFITRT 303
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEY 375
+ + VG +Y + F + + + P+++++ L K G IP ++PG T EY
Sbjct: 304 FDYTSPVGM--IIYVAMIIAFTYFYTFVQVN--PEQMSENLQKQGGYIPGIRPGHNTEEY 359
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
LT++ F G L L++++ IL L + IG TS+LI+VG ++ + +
Sbjct: 360 LTRVINRLTFVGALFLAVVSVFPMILGS-LANLPSAVQIGGTSLLIVVGVALQTMKQLEG 418
>gi|419850265|ref|ZP_14373268.1| preprotein translocase, SecY subunit, partial [Bifidobacterium
longum subsp. longum 35B]
gi|386409762|gb|EIJ24596.1| preprotein translocase, SecY subunit, partial [Bifidobacterium
longum subsp. longum 35B]
Length = 417
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 198/420 (47%), Gaps = 27/420 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 74
++ E+R+++ +I++ RIG FIP PG D ++ + + S S + L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLF 65
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 66 SGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGL 125
Query: 135 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 126 AVLQSTTILVTARSGALFNYQCDQVIPDGSVFNLVVMVLIMTGGTGLIMWMAELVTDKGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 246
GQG S++I + I +G+ L+++ G+ W F + + + I+ V E C
Sbjct: 186 GQGMSILIFMSICSGFLPQLWEIGYGTNGTDGDWLKFGIVVGVLVVILIF--VDFVELCQ 243
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 244 RRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGK 297
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
VK I N + W Y +YA + F F I P E AD + + G IP
Sbjct: 298 SDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFFYTSITFNPDETADNMKQYGGFIP 355
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++ G AT YLT + G + L +A T+L L +N G T++LII G
Sbjct: 356 GIRAGNATSRYLTYVMNRLNTVGAVYLLFVALIPTVLIMAL-GLNAKLPFGGTTILIIAG 414
>gi|19704945|ref|NP_602440.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296329200|ref|ZP_06871701.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|19712847|gb|AAL93739.1| Protein translocase subunit secY [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296153556|gb|EFG94373.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 426
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 217/434 (50%), Gaps = 33/434 (7%)
Query: 17 NNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG- 74
N+ S K E+R R+ T ++ +++R+G IP PG D D LS ++ D L
Sbjct: 8 NSRLSSIVKIPELRERIIFTLLMFLVARVGTLIPAPGVD-----VDRLSSMASQSDVLSY 62
Query: 75 ----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
GA ++S F LGI P I ASI++ +L I+P L +++KEG G +I + ++
Sbjct: 63 INMFSGGAFTRISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYL 122
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
++ AI++ V C L + + + T L G + + W+ + IS G G G
Sbjct: 123 TIALAIIQGTGV-CLWLQSVGLIYNPGISFFVRTITTLTAGTVFLMWVGEQISIKGIGNG 181
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKV 249
SLII + +++ ++ + + + G+ ++ +L L+ VT+ +V+ + G RK+
Sbjct: 182 VSLIIFLNVISRAPSSVIQTIQTMQGN--KFLIPLLVLVAFLGTVTIAGIVLFQLGQRKI 239
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 309
+ Y G +S I E + +IP +N +G+ PV+ + + P ++ + L P
Sbjct: 240 PIHYVGKGFSSKGG----IGE-KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PST 292
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVK 367
+K L+ G VY +YA + F+ F A + P+++A+ L + G IP ++
Sbjct: 293 LSIKTTLS--IIFGQNHPVYMILYALVIMFFSFFYTALVFDPEKVAENLKQGGGTIPGIR 350
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGS 425
PG+ T+EYL + + + GG+ L+I++ + Y+ + G + G T ++I+VG
Sbjct: 351 PGEETVEYLEGVASRITWGGGIFLAIIS-----ILPYVIFTSMGLPVYFGGTGIIIVVGV 405
Query: 426 IIELRRSYQAYNVM 439
++ + A+ VM
Sbjct: 406 ALDTIQQIDAHLVM 419
>gi|297564057|ref|YP_003683030.1| preprotein translocase subunit SecY [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296848506|gb|ADH70524.1| preprotein translocase, SecY subunit [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 437
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 199/435 (45%), Gaps = 34/435 (7%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---- 76
+F ++R +L T ++ I R+G IP PG + I +D + ++ S D+ G +
Sbjct: 7 RAFRTPDLRNKLLFTLFILTIFRLGSVIPAPGINSAAI-RDQMEAITSS-DQSGVYALVN 64
Query: 77 ----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
GA L+L+ F LG+ P I ASI++ +L ++P L L+KEG G KI Y +++L
Sbjct: 65 LFSGGALLQLAVFALGVMPYITASIIINLLTVVIPRLEALKKEGQSGQSKITQYTRYLTL 124
Query: 133 GFAILEAV-IVACY--------SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTIS 183
+L+A IVA ++P S Y + + ++ F + G + W + I+
Sbjct: 125 MLGVLQATSIVAMARTGALFQGAIPVSSYMPNQDILTLVTIVFTMTAGTAIIMWFGELIT 184
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 243
E G G G SL+I ++ + ++ + + W F L+ + +V + AVV
Sbjct: 185 ERGVGNGMSLLIFTQVIAMFPSSMVALFQER-----SIWVF--SLICIAGLVLITAVVFM 237
Query: 244 EGC-RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
E R++ +QY + S YIP +N +G+ PV+ + LL P +L
Sbjct: 238 EQAQRRIPVQYAKRMVGRRMYGGS-----STYIPLKVNQAGIIPVIFASSLLYLPQLLVG 292
Query: 303 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFV-FLFNIFDIANLPKEIADYLNKMGA 361
++G V + G P T + + F F I P E+AD + K G
Sbjct: 293 LMGQDSTHPVVTFVQDYFLTGTHPVYMATFFVMIIGFAFFYVAITFNPAEVADNMKKYGG 352
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
IP ++PG+ T EYL + G L L ++A + + F G TS+LI
Sbjct: 353 FIPGIRPGRPTAEYLDYVLTRLTTPGSLYLGVIALLPMVALGA-TGASANFPFGGTSILI 411
Query: 422 IVGSIIELRRSYQAY 436
+VG ++ + +++
Sbjct: 412 MVGVGLDTVKQIESH 426
>gi|407010050|gb|EKE25055.1| hypothetical protein ACD_5C00313G0003 [uncultured bacterium]
Length = 423
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 203/439 (46%), Gaps = 36/439 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQD----YLSFV 66
+L + F E+R ++ +++I RI +PLPG + RRL + L+
Sbjct: 1 MLEKITQIFKIPELRNKILFILGILIIFRIAANVPLPGVNIEQLRRLFEGNQFLGMLNVF 60
Query: 67 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKS 125
SG G +S LG+ P I ASI+MQ++ IVP + QL ++EG G +K
Sbjct: 61 SG--------GGLTNISIVMLGVGPYITASIIMQLMTMIVPRVEQLYKEEGEAGRQKFNM 112
Query: 126 YIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 185
+ W+++ AIL+ + + + S + V + G + + W+ + I+E
Sbjct: 113 WTRWLTVPLAILQTFSMVTLLRSQGVLTVTSSF-DIAVIVIIATAGTVFLMWLGELITEK 171
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G G SLII GI++G L K+ + V + LGLL V I V+VTEG
Sbjct: 172 GIGNGVSLIIFAGIVSGLPSGLSKLFLTFDSTQVFVY---LGLLVVTLITIAGVVLVTEG 228
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL- 304
R + + Y A R + V ++P +N +G+ P++ ++ FP ++AS L
Sbjct: 229 QRNIPVSY-----AKRVRGEKTYGGVSSHLPLRVNQAGVIPIIFAMSIMLFPGMIASFLM 283
Query: 305 --GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMG 360
SP + ++N ++ Y ++Y + +F F A + P +I++ L K G
Sbjct: 284 KASSPAIANAASMVN---NLFQNQVFYSSMYFVLIVMFTYFYTAVVFDPVKISENLQKQG 340
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
IP ++PGK T ++L +I G + L +A I+ + IG T +L
Sbjct: 341 GYIPGIRPGKTTADFLYRIMNRITLTGSIFLGTIAVLPFIVQGVTNI--QSLQIGGTGIL 398
Query: 421 IIVGSIIELRRSYQAYNVM 439
I+V +IE + + VM
Sbjct: 399 IVVSVVIETIKQIEGQLVM 417
>gi|342217987|ref|ZP_08710619.1| preprotein translocase, SecY subunit [Megasphaera sp. UPII 135-E]
gi|341591753|gb|EGS34855.1| preprotein translocase, SecY subunit [Megasphaera sp. UPII 135-E]
Length = 420
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 211/446 (47%), Gaps = 52/446 (11%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L N SE R+R T ++ ++ R+G IP+PG D +I F SG++ L
Sbjct: 1 MLENLQNVINVSEFRKRAIFTLIMFIVFRLGVHIPVPGVDSSVIEN---LFTSGNLFGLL 57
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
D GA K S + I+P I ASI+MQ+L +VP+ Q K+ DG +KI+ + +
Sbjct: 58 DLFSGGALSKFSILAMSITPYINASIIMQLLTSVVPTFEQWAKDNQDGRDKIQKVTRYGT 117
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+ A+++A+ ++ Y+L + S V++ +L G + W+ D I+ G G G
Sbjct: 118 VALALIQALAMS-YALKVNNALVVDSWSTVIMVTLILTAGTCFLMWLGDQITAGGIGNGI 176
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SLII GI+ + + + S+ + +L ++ F ++ + V VT+G R+V +
Sbjct: 177 SLIIFAGIVARFPNGCATVYKYIQAGSINIFQAILFVIIAFFMIAI-VVEVTQGTRRVTV 235
Query: 252 QY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
QY G K+ +IP +N +G+ P++ + +L FP +A
Sbjct: 236 QYAKRIVGRKMYGGH---------STHIPLKVNQAGVIPLIFASSVLMFPVTIAQ----- 281
Query: 308 FWQHVKEILNPETSVGARPWVYYT---IYAFFVFLFNIFDIA---NLPKEIADYLNKMGA 361
F Q+ + G W T +YA +F F F A N+P ++ + + K G
Sbjct: 282 FSQNA----TIKMVAGWFAWGTVTNTVMYAILIFFFTYFYTAISLNIP-QLTENMQKYGG 336
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSV 419
IP ++PG+ T +++ KI G L+ +A IL +++ I +G G T++
Sbjct: 337 FIPGIRPGQPTAKHIDKIMTRITLAGAFFLAFVA----ILPNFIGWITGVQGVYFGGTAL 392
Query: 420 LIIVGSIIE---------LRRSYQAY 436
LI+VG I+ L + YQ +
Sbjct: 393 LIVVGVAIDTMKQAESLVLNKQYQGF 418
>gi|312899063|ref|ZP_07758447.1| preprotein translocase, SecY subunit [Megasphaera micronuciformis
F0359]
gi|310619848|gb|EFQ03424.1| preprotein translocase, SecY subunit [Megasphaera micronuciformis
F0359]
Length = 420
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 205/427 (48%), Gaps = 38/427 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E R+R T ++ +I R+G IP+PG D I F SG++ L D GA K S
Sbjct: 13 EFRKRAVFTLIMFIIFRLGVHIPVPGVDAAAIEG---LFNSGNLFGLLDLFSGGALSKFS 69
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
+ I+P I ASI+MQ+L +VP+ Q K+ DG +KI+ + ++ ++A ++
Sbjct: 70 VLAMSITPYINASIIMQLLTAVVPTFEQWSKDNQDGRDKIQKVTRYGTVLLGFIQAFAMS 129
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
Y+L + +S V++ A +L G + W+ D I+ G G G SLII GI+ +
Sbjct: 130 -YALKVNNALIDNSWTTVLMVAVILTAGTCFLMWLGDQITAGGIGNGISLIIFAGIVARF 188
Query: 204 ---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
TLY+ + G+ + + L+ +F IV + V VT+G R+V +QY A
Sbjct: 189 PNGVNTLYQYVQA--GTINIFQAALFALIALFMIVIV--VEVTQGQRRVNVQY-----AK 239
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
+IP +N +G+ P++ + +L FP +A + + Q + ++ T
Sbjct: 240 RVVGRKMYGGHSTHIPLKVNQAGVIPIIFASSVLMFPITIAQFIQNDTIQWLAQVFGWGT 299
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQ 380
A Y + FF + + + N+P ++ + + K G IP ++PG+ T Y+ +I
Sbjct: 300 L--ANTVAYAVLIIFFTYFYTAISL-NIP-QMTENMQKYGGFIPGIRPGEPTARYIDRIM 355
Query: 381 ASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSVLIIVGSIIE---------L 429
G L+ +A IL +++ I +G G T+VLI+VG I+ L
Sbjct: 356 TRITLAGAFFLAFVA----ILPNFIGWITGIQGVYFGGTAVLIVVGVAIDTMKQAESLVL 411
Query: 430 RRSYQAY 436
+ YQ +
Sbjct: 412 NKQYQGF 418
>gi|255067438|ref|ZP_05319293.1| preprotein translocase, SecY subunit [Neisseria sicca ATCC 29256]
gi|255048233|gb|EET43697.1| preprotein translocase, SecY subunit [Neisseria sicca ATCC 29256]
Length = 448
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 209/422 (49%), Gaps = 28/422 (6%)
Query: 27 EIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
++++RL F+ LIV RIG IP+PG D + + Y S +G + L F G+ + S
Sbjct: 26 DLKKRLTFLLGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGMLNMFSGGSLERFS 84
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++ AIL++ VA
Sbjct: 85 IFAIGIMPYISASIIVQLASEIIPSLKALKKEGEAGRKVITKYTRYGTVLLAILQSFGVA 144
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
+ + ++S++ + T LV G M + W+ + I+E G G G SLII GI G
Sbjct: 145 TFVFQQGV-VVTNSLEFHISTVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIAAGI 203
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAA 262
+ ++L+ S+ + ++G ++ + VV E RKV + Y ++ S
Sbjct: 204 PSGIARLLALTSQGSIGMPTAVSIVIGALLLI--YIVVYFESAQRKVPVHYAKRQIGSGV 261
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEILNP 318
+ S ++PF +N +G+ P + + ++ FPS L S GS + +L
Sbjct: 262 MQGS-----NTHMPFKLNMAGVIPPIFASSIILFPSTLLSWFGSNDTGSLLHKIAGLLQH 316
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYL 376
+ +Y ++ + F F A + PKE+A+ L K GA +P ++PGK T +YL
Sbjct: 317 GQA------LYILLFTVTIIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGKQTSQYL 370
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
++ +G L ++ T I + +N F +G TS+LI+V ++ +Y
Sbjct: 371 EQVVLRLTLFGALYIT---TICLIPEFLTTALNVPFYLGGTSLLILVVVTMDFSTQINSY 427
Query: 437 NV 438
+
Sbjct: 428 RM 429
>gi|58336649|ref|YP_193234.1| preprotein translocase subunit SecY [Lactobacillus acidophilus
NCFM]
gi|227903207|ref|ZP_04021012.1| preprotein translocase subunit SecY [Lactobacillus acidophilus ATCC
4796]
gi|58253966|gb|AAV42203.1| protein translocase [Lactobacillus acidophilus NCFM]
gi|227869012|gb|EEJ76433.1| preprotein translocase subunit SecY [Lactobacillus acidophilus ATCC
4796]
Length = 431
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 214/430 (49%), Gaps = 27/430 (6%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
S L NA F EIR +++ T +++I RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIYFTLFILLIYRIGANITVPGVNAKAITQVAQTGLVPMLDTV 59
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLTL 118
Query: 133 GFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFVQSIGITLGFNALTQMGLVKNQTPQTYVEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 245
S+II GI+ L+++ + + +S RW F + ++ IVT V +
Sbjct: 179 VSVIIFAGIIARLPSGLWQIYKEEIINNSASDRWQGILFFIAVIVAILIVTQLVTWVEQA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVL-TTTYLLAFPSILASIL 304
R++ +QY + I+ E ++P +N SG+ PV+ +++++ +IL +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIITPATILMAFQ 289
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGAR 362
+ Q ++LN S+ P V IY + LF F + P+++A+ L K GA
Sbjct: 290 RTQGDQQWFKVLNQIFSLQTTPGVI--IYTLLIILFTFFYAFVQVNPEKLAENLQKQGAY 347
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP+V PGK T Y++K+ G + L ++A + ++ + +G TS+LI+
Sbjct: 348 IPSVWPGKDTQNYISKMLIKLSTVGSIFLGLVALLPQLATNFW-NLPSSIGLGGTSLLIV 406
Query: 423 VGSIIELRRS 432
+G ++EL R
Sbjct: 407 IGVVLELSRQ 416
>gi|357411713|ref|YP_004923449.1| preprotein translocase subunit SecY [Streptomyces flavogriseus ATCC
33331]
gi|320009082|gb|ADW03932.1| preprotein translocase, SecY subunit [Streptomyces flavogriseus
ATCC 33331]
Length = 439
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 210/442 (47%), Gaps = 36/442 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDE 72
+L A +F ++R++L T +IV+ R+G IP+PG + D S + S+
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVLYRLGAHIPVPGVSYENVQTCVDQASKGNNSLFG 60
Query: 73 LGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
L + GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 61 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRY 120
Query: 130 ISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICD 180
+++ AIL+ + + ++++ + S+ +V + G + W+ +
Sbjct: 121 LTVALAILQGTGLVATARSGALFSGCPVADQIVPNQSIFTTIVMVITMTAGTAAVMWLGE 180
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I++ G G G S+++ + I + L+ + Q + W F+ +L F +V + V
Sbjct: 181 LITDRGIGNGMSILMFISIAASFPGALWA-IKQSGKLADGWIEFITVILIGFVMVAL-VV 238
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R+V +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 239 FVEQAQRRVPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 293
Query: 301 A----SILGSPFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIA 353
S G W + G P+ Y+ + FF F + I+ P+E+A
Sbjct: 294 VQFSNSTAGWATW------IQDHFVKGDHPYYIATYFLLIVFFAFFY--VAISFNPEEVA 345
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS 413
D + K G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F
Sbjct: 346 DNMKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGGANQNFP 405
Query: 414 IGFTSVLIIVGSIIELRRSYQA 435
G TS+LIIVG +E + ++
Sbjct: 406 FGGTSILIIVGVGLETVKQIES 427
>gi|392309054|ref|ZP_10271588.1| preprotein translocase subunit SecY [Pseudoalteromonas citrea NCIMB
1889]
Length = 442
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 198/434 (45%), Gaps = 26/434 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++RRL I+I R+G F+P+PG D ++ ++ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLA-EFFEQQKGTIVEMFNMFSGGALERA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI+MQ+L HI P++++L+KEG G +KI Y + +L A +++ +
Sbjct: 75 SVLALGIMPYISASIIMQLLTHIHPAMIELKKEGEQGRKKISQYTRYGTLVLATFQSIGI 134
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A LP + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-GLPSMMDGLVVNPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
+ + +L + VF VT V G R++ + Y A
Sbjct: 194 ANLPSAIGSTAEMARQGDLHVLALLLIAVIVFA-VTYLVVFFERGQRRIVVNY-----AK 247
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQHVKE 314
+ ++P +N +G+ P + + ++ FP +AS G + Q +
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVADVLQAISA 307
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
+L P + A I+ F + +F+ P+E AD L K GA IP ++PG+ T +
Sbjct: 308 VLTPGQPLYAMVLAAAIIFFCFFYTALVFN----PRETADNLKKSGAFIPGIRPGEQTSK 363
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ K+ G L ++ + + + F G TS+LIIV I++ Q
Sbjct: 364 YIDKVMTRLTLAGALYITFICLVPEFMTMAWQ---TPFYFGGTSILIIVVVIMDFMAQVQ 420
Query: 435 AYNVMPSLSKALRR 448
+ + L++
Sbjct: 421 THMMSHQYDSVLKK 434
>gi|72163025|ref|YP_290682.1| preprotein translocase subunit SecY [Thermobifida fusca YX]
gi|71916757|gb|AAZ56659.1| protein translocase subunit secY/sec61 alpha [Thermobifida fusca
YX]
Length = 442
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 205/439 (46%), Gaps = 37/439 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSG--SVDELG 74
+F E+R +L T ++ I R+G IP PG D + + Q + S ++ L
Sbjct: 7 RAFRTPELRNKLLFTLFILTIFRLGAVIPAPGIDSVAIEKCVQQTAETGASNIYALINLF 66
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+L+ F LGI P I ASI++ +L +VP L L+KEG G KI Y ++++
Sbjct: 67 SGGALLQLAVFALGIMPYITASIILNLLTVVVPRLEALKKEGQAGQSKITQYTRYLTIAL 126
Query: 135 AILEAVIV------------ACYSLPYSIY-AASHSVKHVMVTAFLLVCGAMTMSWICDT 181
A+L++ V AC Y + S+ + +++ F++ G + W +
Sbjct: 127 AVLQSTSVIAMARTGQLFQNACIPEEYMPFLHTSYELPVLIMIVFVMTAGTCVIMWFGEL 186
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
I+E G G G SL+I I+ + + ++ S+ W F L + ++T V
Sbjct: 187 ITERGVGNGMSLLIFTQIIAEFPAGMMRIWSE-----NPAWVFALVCVAGVVLIT-GVVF 240
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
+ + R++ +QY + S YIP +N +G+ PV+ + LL P+++
Sbjct: 241 IEQAQRRIPVQYAKRMVGRRMYGGS-----STYIPLKVNQAGVIPVIFASSLLYLPTLVV 295
Query: 302 SILGSPFWQHVKEILNPE-TSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNK 358
+LG+ V + LN +G P VY T + + F F +A P E+AD + K
Sbjct: 296 GLLGAETDNKVVDFLNTYFNPMGNHP-VYLTTFFLLIVGFAFFYVAITFNPAEVADNMKK 354
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI-LDHYLRRINEGFSIGFT 417
G IP+++PG+ T EYL + G L L ++A + L N F G
Sbjct: 355 YGGFIPSIRPGRPTAEYLDYVLTRLTTPGALYLGVIALLPMVALGTSGAAAN--FPFGGV 412
Query: 418 SVLIIVGSIIELRRSYQAY 436
S+LI+VG ++ + +++
Sbjct: 413 SILIMVGVGLDTVKQIESH 431
>gi|257069487|ref|YP_003155742.1| protein translocase subunit secY/sec61 alpha [Brachybacterium
faecium DSM 4810]
gi|256560305|gb|ACU86152.1| protein translocase subunit secY/sec61 alpha [Brachybacterium
faecium DSM 4810]
Length = 434
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 204/426 (47%), Gaps = 32/426 (7%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRR--LIPQDYLSFVSGSVDEL 73
+N+ + E+R ++F T LI + R+G F+P PGFD ++ D + GS + L
Sbjct: 1 MNSFVRALRTPELRAKIFFTLGLIAVYRLGVFVPTPGFDATNVMMCADQAASAGGS-NVL 59
Query: 74 G-----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
G GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y
Sbjct: 60 GMVNMFSGGALLQLSVFALGVMPYITASIIVQLLRVVIPRFEALHKEGASGTAKLTQYTR 119
Query: 129 WISLGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDT 181
++++G +L++ + + + S+ ++ + G + + ++ +
Sbjct: 120 YLTIGLGVLQSTTIVTLVRSGNFFVGCELELVPDQSIPTLLTMVLTMTVGTVLIMFMGEM 179
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
I+E G G G SL+I I + + + ++ S L G W F L +L V ++ + V
Sbjct: 180 ITERGIGNGMSLLIFTSIASSFPASFGQVWS-LQG----WLTFSLVVL-VALVIMVGMVF 233
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
V + R++ +QY A YIP +N +G+ PV+ + +LA P +L+
Sbjct: 234 VEQSQRRIPVQY-----AKRMVGRRMYGGTSTYIPVKVNQAGVIPVIFASSILALPQMLS 288
Query: 302 SILGSPFWQHVKEILNPETSVG-ARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNK 358
S G P V+ + N +G + W+Y +Y + F F I +EIAD + K
Sbjct: 289 S-FGDPEAGWVQWV-NANLVLGFSFSWIYAVVYVTLIVFFAFFYTSITFNAEEIADNMKK 346
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
G IPNV+ G+ T YL + + G + L+++ I YL ++ F +G S
Sbjct: 347 YGGFIPNVRAGRPTERYLRYVINRVQSAGAVYLAVICLIPLIALVYLGT-SQDFPLGGVS 405
Query: 419 VLIIVG 424
+LII+G
Sbjct: 406 LLIIIG 411
>gi|403045925|ref|ZP_10901401.1| preprotein translocase subunit SecY [Staphylococcus sp. OJ82]
gi|402764746|gb|EJX18832.1| preprotein translocase subunit SecY [Staphylococcus sp. OJ82]
Length = 430
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 209/429 (48%), Gaps = 33/429 (7%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
SFFK+ E+R ++F T ++VI +IG +IP PG FD R Q G D L
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDSRQGSQ-------GVTDLLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++
Sbjct: 60 FGGGALQNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGDAGRKKLTNITRYFAI 119
Query: 133 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 VLAFIQSIGMAFQFNNYLKGQLIIDQSILSYLLIAVVLTAGTAFLIWMGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
S+II GIL+ +L + Q + W +LGL+ ++T+ A+ V + R
Sbjct: 180 ISIIIFGGILSSLPSSLIQFYQQSFVGQDDTTMAWLKVLGLIIGMVLLTVGAIFVLQAIR 239
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
K+ +QY K S R S T Y+P +N +G+ PV+ P L
Sbjct: 240 KIPIQYA--KKQSTQRLGSQAT----YLPLKVNAAGVIPVIFAMAFFLLPRTLTLFFPDA 293
Query: 308 FW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNV 366
W Q + ++ NP +++G VY + F + + + P +++D L K G+ +P +
Sbjct: 294 SWAQKISDVANPSSNIGM--IVYVVLIIAFTYFYAFVQVN--PGKMSDNLKKQGSYVPGI 349
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PG+ T +Y+T + F G + L+++A I + + + +G TS+LI++G
Sbjct: 350 RPGEQTKKYITGVLYRLTFVGSIFLAVIAILPIIATKVM-SLPQSIQLGGTSLLIVIGVA 408
Query: 427 IELRRSYQA 435
IE +S +A
Sbjct: 409 IETMKSLEA 417
>gi|423351607|ref|ZP_17329238.1| preprotein translocase subunit secY [Turicella otitidis ATCC 51513]
gi|404386327|gb|EJZ81490.1| preprotein translocase subunit secY [Turicella otitidis ATCC 51513]
Length = 442
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 195/404 (48%), Gaps = 42/404 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF-- 76
+ F +++RR++ T LI++ RIG IP PG D I + LS GSV L +
Sbjct: 6 QVFKDADLRRKILFTLGLIILYRIGAQIPAPGVDYTQISGRLEELSEDQGSVYSLINLFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F +GI P I ++I++Q+L ++P QL+KEG G K+ Y ++++ A
Sbjct: 66 GGALLQLSVFAIGIMPYITSAIIVQLLTVVIPKFEQLKKEGQSGQAKMTQYTRYLTVALA 125
Query: 136 ILEAV-IVACYSLPY------SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+L++ IVA + ++ +++ +L GA+ + W+ + I+E G G
Sbjct: 126 LLQSSGIVALADRQQLLGPGVEVLDPDRTIWDLIMLTLVLTSGAVLIMWLGELITEKGVG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCR 247
G SL+I GI T ++L+ G + G++ V I + VV V +G R
Sbjct: 186 NGMSLLIFAGIATRLPTDGVQILNNSGG-------LVFGIILVAVIALVVGVVFVEQGQR 238
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 306
++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 239 RIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITEIVNSG 293
Query: 307 ------PFWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYL 356
+WQ+ + + P + WVY IY V F+ F + P++ AD +
Sbjct: 294 RTTPPDNWWQNNVIAYLQTPSS------WVYILIYFVLVIFFSYFYVSVQYDPRDQADNM 347
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI 400
K G IP ++PG T +YL + F G + L+++A I
Sbjct: 348 KKYGGFIPGIRPGTPTAQYLAYVMNRLLFVGSIYLALIAVLPNI 391
>gi|392970123|ref|ZP_10335531.1| protein-export membrane protein SecY [Staphylococcus equorum subsp.
equorum Mu2]
gi|392511715|emb|CCI58738.1| protein-export membrane protein SecY [Staphylococcus equorum subsp.
equorum Mu2]
Length = 430
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 209/429 (48%), Gaps = 33/429 (7%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
SFFK+ E+R ++F T ++VI +IG +IP PG FD R Q G D L
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDSRQGSQ-------GVTDLLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++
Sbjct: 60 FGGGALQNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAKQGDAGRKKLTNITRYFAI 119
Query: 133 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 VLAFIQSIGMAFQFNNYLKGQLIIDQSILSYLLIAVVLTAGTAFLIWMGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
S+II GIL+ +L + Q + W +LGL+ ++T+ A+ V + R
Sbjct: 180 ISIIIFGGILSSLPSSLIQFYQQSFVGQDDTTMAWLKVLGLIIGMVLLTVGAIFVLQAIR 239
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
K+ +QY K S R S T Y+P +N +G+ PV+ P L
Sbjct: 240 KIPIQYA--KKQSTQRLGSQAT----YLPLKVNAAGVIPVIFAMAFFLLPRTLTLFFPDA 293
Query: 308 FW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNV 366
W Q + ++ NP +++G VY + F + + + P +++D L K G+ +P +
Sbjct: 294 SWAQKITDVANPSSNIGM--IVYVVLIIAFTYFYAFVQVN--PGKMSDNLKKQGSYVPGI 349
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PG+ T +Y+T + F G + L+++A I + + + +G TS+LI++G
Sbjct: 350 RPGEQTKKYITGVLYRLTFVGSIFLAVIAILPIIATKVM-SLPQSIQLGGTSLLIVIGVA 408
Query: 427 IELRRSYQA 435
IE +S +A
Sbjct: 409 IETMKSLEA 417
>gi|294783622|ref|ZP_06748946.1| preprotein translocase, SecY subunit [Fusobacterium sp. 1_1_41FAA]
gi|294480500|gb|EFG28277.1| preprotein translocase, SecY subunit [Fusobacterium sp. 1_1_41FAA]
Length = 426
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 214/423 (50%), Gaps = 32/423 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLI----PQDYLSFVSGSVDELGDFGAELK 81
E+R R+ T ++ +++R+G IP PG D RL D LS+++ + GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVDVDRLASMASKSDVLSYIN-----MFSGGAFTR 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGAG 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLVYNPGISFFVRTITTLTAGTVFLMWVGEQISVKGIGNGVSLIIFLNVIS 192
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 260
++ + + ++ G F+ L+ V++ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTVQKMQGDKFLIPLFV--LVAFLATVSIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
S I E + +IP +N +G+ PV+ + + P ++ + L S +K L+
Sbjct: 251 ----KSGIGE-KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNALPSDL--QLKTTLS--I 301
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTK 378
G VY +YA + F+ F A + P+++A+ L + G IP ++PG+ T+EYL
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFFYTALVFDPEKVAENLRQSGGTIPGIRPGEETVEYLEG 361
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQAY 436
+ + + GGL L++++ + Y+ + G + G T ++I+VG ++ + A+
Sbjct: 362 VASRITWGGGLFLAVIS-----ILPYVIFTSMGLPVYFGGTGIIIVVGVALDTIQQIDAH 416
Query: 437 NVM 439
VM
Sbjct: 417 LVM 419
>gi|443321121|ref|ZP_21050185.1| protein translocase subunit secY/sec61 alpha [Gloeocapsa sp. PCC
73106]
gi|442789149|gb|ELR98818.1| protein translocase subunit secY/sec61 alpha [Gloeocapsa sp. PCC
73106]
Length = 438
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 206/431 (47%), Gaps = 26/431 (6%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
A E+F + + +R RL +T L+++ R+G FIP+PG DR + + ++
Sbjct: 10 TAQETFMQMAQAAGLRSRLLITIALLILVRLGIFIPIPGIDRLKFAEAIQTVPGLGFLDI 69
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 132
G L F LGI P I ASI++Q+L + L L+K EG G KI +++L
Sbjct: 70 FTGGGLSALGIFALGILPYINASIIVQLLTAAIKPLEDLQKNEGEAGRRKISQVTRYVAL 129
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
+AI ++ + L YA + V+ TA L G+M + W+ + I+E G G G+S
Sbjct: 130 VWAIAQSTAITLGLL--RPYALDPGIWFVVETATALTAGSMFVMWVSELITERGIGNGAS 187
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
L+I V I+ +TL + + ++ LL VF ++ + V + EG R++ +
Sbjct: 188 LLIFVNIVAILPKTLGQTIQFAQQGGQETIAQVVILLIVFLVMIVGIVFIQEGTRRIPI- 246
Query: 253 YYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPF 308
SA R+ E Y+P +N SG+ P++ + LL PS LA P
Sbjct: 247 ------ISAKRQVGRRLYRERTSYLPLRLNQSGVMPIIFASALLIVPSSLAGFFRGEGPI 300
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNV 366
Q ++ N V W Y Y + F+ F + + P +++ L KMGA IP +
Sbjct: 301 SQVLQ---NLALWVQPGGWGYIVFYLALILFFSYFYTSLISNPVDMSQNLKKMGASIPGI 357
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGS 425
+PGKAT +YL + F G L I+AT T+++ GF G TS+LI+VG
Sbjct: 358 RPGKATSDYLEGVLNRLTFLGAAFLGIVATVPTLVESATGVTTFRGF--GATSLLILVGV 415
Query: 426 IIELRRSYQAY 436
I+ + Q Y
Sbjct: 416 AIDTAKQIQTY 426
>gi|456389448|gb|EMF54888.1| secY protein [Streptomyces bottropensis ATCC 25435]
Length = 437
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 212/437 (48%), Gaps = 28/437 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDE 72
+L A +F ++R++L + +IVI RIG IP+PG D ++ D SG
Sbjct: 1 MLTAFARAFKTPDLRKKLLFSLGIIVIYRIGTHIPIPGVDYTVVQYCIDQTKSNSGLFGL 60
Query: 73 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ F GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTSKITQYTRYL 120
Query: 131 SLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDT 181
++ AIL+ + + +++++ S+ +V + G + W+ +
Sbjct: 121 TVALAILQGTGLVATARSGALFSSCPQGSQIVPDQSIFATIVMVVTMTAGTAVVMWLGEL 180
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
I++ G G G S+++ + I + +L+ + Q G W ++ V ++ V
Sbjct: 181 ITDRGIGNGMSILMFISIAATFPSSLWAIKEQ--GDLADGWIEFAVVIAVGLVMVALVVF 238
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++A
Sbjct: 239 VEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGIIPVIFASSLLYIPALVA 293
Query: 302 SIL-GSPFWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNK 358
G+ W+ K + P+ + + I+ F ++ F+ P+E+AD + K
Sbjct: 294 QFAGGTSGWKTWIEKNLAQPDAPAHITLYFFLIIFFAFFYVAISFN----PEEVADNMKK 349
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
G IP ++ G+ T EYL+ + + G L L+++A T+ L N+ F G TS
Sbjct: 350 YGGFIPGIRAGRPTAEYLSFVLNRITWPGSLYLALIALVPTMALAPLGA-NQNFVFGGTS 408
Query: 419 VLIIVGSIIELRRSYQA 435
+LIIVG +E + ++
Sbjct: 409 ILIIVGVGLETVKQIES 425
>gi|395238099|ref|ZP_10416078.1| Preprotein translocase subunit secY [Turicella otitidis ATCC 51513]
gi|394486535|emb|CCI84166.1| Preprotein translocase subunit secY [Turicella otitidis ATCC 51513]
Length = 448
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 195/404 (48%), Gaps = 42/404 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF-- 76
+ F +++RR++ T LI++ RIG IP PG D I + LS GSV L +
Sbjct: 12 QVFKDADLRRKILFTLGLIILYRIGAQIPAPGVDYTQISGRLEELSEDQGSVYSLINLFS 71
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F +GI P I ++I++Q+L ++P QL+KEG G K+ Y ++++ A
Sbjct: 72 GGALLQLSVFAIGIMPYITSAIIVQLLTVVIPKFEQLKKEGQSGQAKMTQYTRYLTVALA 131
Query: 136 ILEAV-IVACYSLPY------SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+L++ IVA + ++ +++ +L GA+ + W+ + I+E G G
Sbjct: 132 LLQSSGIVALADRQQLLGPGVEVLDPDRTIWDLIMLTLVLTSGAVLIMWLGELITEKGVG 191
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCR 247
G SL+I GI T ++L+ G + G++ V I + VV V +G R
Sbjct: 192 NGMSLLIFAGIATRLPTDGVQILNNSGG-------LVFGIILVAVIALVVGVVFVEQGQR 244
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 306
++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 245 RIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITEIVNSG 299
Query: 307 ------PFWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYL 356
+WQ+ + + P + WVY IY V F+ F + P++ AD +
Sbjct: 300 RTTPPDNWWQNNVIAYLQTPSS------WVYILIYFVLVIFFSYFYVSVQYDPRDQADNM 353
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI 400
K G IP ++PG T +YL + F G + L+++A I
Sbjct: 354 KKYGGFIPGIRPGTPTAQYLAYVMNRLLFVGSIYLALIAVLPNI 397
>gi|262066284|ref|ZP_06025896.1| preprotein translocase, SecY subunit [Fusobacterium periodonticum
ATCC 33693]
gi|291379979|gb|EFE87497.1| preprotein translocase, SecY subunit [Fusobacterium periodonticum
ATCC 33693]
Length = 426
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 214/423 (50%), Gaps = 32/423 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLI----PQDYLSFVSGSVDELGDFGAELK 81
E+R R+ T ++ +++R+G IP PG D RL D LS+++ + GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVDVDRLASMASKSDVLSYIN-----MFSGGAFTR 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGAG 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLVYNPGISFFVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 260
++ + + ++ G F+ L+ V++ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTVQKMQGDKFLIPLFV--LVAFLATVSIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
S I E + +IP +N +G+ PV+ + + P ++ + L S +K L+
Sbjct: 251 ----KSGIGE-KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNALPSDL--QLKTTLS--I 301
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTK 378
G VY +YA + F+ F A + P+++A+ L + G IP ++PG+ T+EYL
Sbjct: 302 VFGQNHPVYMILYALVIMFFSFFYTALVFDPEKVAENLRQSGGTIPGIRPGEETVEYLEG 361
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQAY 436
+ + + GGL L++++ + Y+ + G + G T ++I+VG ++ + A+
Sbjct: 362 VASRITWGGGLFLAVIS-----ILPYVIFTSMGLPVYFGGTGIIIVVGVALDTIQQIDAH 416
Query: 437 NVM 439
VM
Sbjct: 417 LVM 419
>gi|288575868|ref|ZP_06394024.1| preprotein translocase, SecY subunit [Neisseria mucosa ATCC 25996]
gi|288566923|gb|EFC88483.1| preprotein translocase, SecY subunit [Neisseria mucosa ATCC 25996]
Length = 445
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 204/415 (49%), Gaps = 17/415 (4%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
++++RL +V+ RIG IP+PG D + + Y S +G + L F G+ + S
Sbjct: 26 DLKKRLTFLLGALVVFRIGAHIPVPGVDAVALAKLYESAGNGILGMLNMFSGGSLERFSI 85
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
F +GI P I ASI++Q+ IVPSL L+KEG G + I Y + ++ AIL++ VA
Sbjct: 86 FAIGIMPYISASIIVQLASEIVPSLKALKKEGEAGRKVITKYTRYGTVLLAILQSFGVAT 145
Query: 145 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 204
+ + ++S++ + T LV G M + W+ + I+E G G G SLII GI G
Sbjct: 146 FVFQQGV-VVTNSLEFHISTVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIAAGIP 204
Query: 205 ETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAAR 263
+S+LL + R + + ++ + ++ ++ VV E RKV + Y ++ S
Sbjct: 205 SG----ISRLLALTSRGFGLPIAIV-IGALLLIYIVVYFESAQRKVPVHYAKRQVGSGVM 259
Query: 264 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVG 323
+ S ++PF +N +G+ P + + ++ FPS L S G + + G
Sbjct: 260 QGS-----NTHMPFKLNMAGVIPPIFASSIILFPSTLLSWFGPSDTGSLLHKIAGLLQHG 314
Query: 324 ARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQAST 383
++ A F + + PKE+A+ L K GA +P ++PGK T +YL ++
Sbjct: 315 QALYILLFTVAIIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGKQTSQYLEQVVLRL 374
Query: 384 RFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNV 438
+G L ++ T I + +N F +G TS+LI+V ++ +Y +
Sbjct: 375 TLFGALYIT---TICLIPEFLTTALNVPFYLGGTSLLILVVVTMDFSTQINSYRM 426
>gi|386773298|ref|ZP_10095676.1| protein translocase subunit secY/sec61 alpha [Brachybacterium
paraconglomeratum LC44]
Length = 434
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 200/426 (46%), Gaps = 32/426 (7%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS-VDELG 74
+N+ + E+R ++ T LI + R+G FIP PGFD + SG + LG
Sbjct: 1 MNSFVRALRTPELRAKILFTLGLIAVYRLGVFIPTPGFDATNVMMCADQAASGQGANVLG 60
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y +
Sbjct: 61 MVNMFSGGALLQLSIFSLGVMPYITASIIVQLLRVVIPRFEALHKEGASGTAKLTQYTRY 120
Query: 130 ISLGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTI 182
+++G +L+A + + + S+ +++ + G + + ++ + I
Sbjct: 121 LTIGLGVLQATTIITLVRSGNFFVGCTLELVPDQSIPTLLLMVMTMTVGTVLIMFMGEMI 180
Query: 183 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLL-GVFTIVTMWAVV 241
+E G G G SL+I I + + + + QL G W F L +L G+ +V M V
Sbjct: 181 TERGVGNGMSLMIFSSIAASFPAS-FGQVWQLKG----WITFSLVMLVGLLIMVGM--VF 233
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
V + R++ +QY A YIP +N +G+ PV+ + +LA P + A
Sbjct: 234 VEQSQRRIPVQY-----AKRMVGRRMYGGTSTYIPIKVNQAGVIPVIFASSILALPQMAA 288
Query: 302 SILGSPFWQHVKEILNPETSVGAR-PWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNK 358
S G P V+ I N +GA W+Y +Y + F F I +EIAD + K
Sbjct: 289 S-FGDPSAGWVQWI-NTHLVLGASFSWIYAVVYVALIVFFAFFYVSITFNAEEIADNMKK 346
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
G +PNV+ GK T YL + + G + L+++ + YL ++ F +G S
Sbjct: 347 YGGFVPNVRAGKPTERYLRYVINRIQSGGAVYLAVICLIPLVALFYLGT-SQDFPLGGVS 405
Query: 419 VLIIVG 424
+LI++G
Sbjct: 406 LLIVIG 411
>gi|254383152|ref|ZP_04998506.1| preprotein translocase subunit secY [Streptomyces sp. Mg1]
gi|194342051|gb|EDX23017.1| preprotein translocase subunit secY [Streptomyces sp. Mg1]
Length = 437
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 211/440 (47%), Gaps = 34/440 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPG--FDRRLIPQDYLSFVSGSVDE 72
+L A++F ++R++L T +IV+ R+G IP+PG + I D +G
Sbjct: 1 MLTAFAQAFKTPDLRKKLLFTLGIIVLFRLGSHIPVPGVSYKNVQICVDQPGNSNGLFGL 60
Query: 73 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ F GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNLFSGGALLQITIFALGIMPYITASIILQLLTVVIPKLENLKKEGQSGTAKITQYTRYL 120
Query: 131 SLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDT 181
++ AIL+ + + +++ S+ +V + G + W+ +
Sbjct: 121 TVALAILQGTGLVATARSGALFQGCQVASQIVPDRSIFTTVVMVITMTAGTCVVMWLGEL 180
Query: 182 ISESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 239
+++ G G G S+++ + I G+ L+ K+ ++ G V + +L L + +V
Sbjct: 181 VTDRGIGNGMSILMFISIAAGFVSALWGIKVQGKIAGGWVEFGVVILVGLAMVALV---- 236
Query: 240 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V V + R++ +QY + A + YIP +N +G+ PV+ + LL P++
Sbjct: 237 VFVEQAQRRIPVQYAKRMIGRRAYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPAL 291
Query: 300 LASILGSPF-WQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADY 355
+ GS W ++ G P+ Y+ + FF F + I+ P+E+AD
Sbjct: 292 IVQFSGSTAGW---ATWISKHFVKGDHPYYIAAYFLLIVFFAFFY--VAISFNPEEVADN 346
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
+ K G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G
Sbjct: 347 MKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGA-NQNFPFG 405
Query: 416 FTSVLIIVGSIIELRRSYQA 435
TS+LIIVG +E + ++
Sbjct: 406 GTSILIIVGVGLETVKQIES 425
>gi|218200780|gb|EEC83207.1| hypothetical protein OsI_28473 [Oryza sativa Indica Group]
Length = 1155
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 202/420 (48%), Gaps = 26/420 (6%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAE 79
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 736 DFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFAGNLDQNSLL-GTLDSFSGGGIG 794
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILE 138
+L LGI P I A I+ Q+L + P L L +KEG G +K+ Y + S+GFAI++
Sbjct: 795 -RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKVLQYTRYASVGFAIVQ 853
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A+ + PY S + V+ + LL G++ ++I + IS+ G G+SL+I
Sbjct: 854 AIGQVLFLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTS 910
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I++ + + ++Q + +L ++ F ++ + V V E RK+ L Y
Sbjct: 911 IISYLPASFGRTVAQAFQDGN--YVGLLTIILSFLVLVLGIVYVQEAERKIPLNY----- 963
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
AS S + Y+PF +N SG+ P++ +T LA P LA G F + LNP
Sbjct: 964 ASRYSSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLDFLKKAAISLNP 1023
Query: 319 ETSVGARPWVYYTIY--AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
G ++ + AFF + + + P ++++ L + GA IP V+PGK+T ++
Sbjct: 1024 ----GGALYIPTNVLLIAFFNYYYTFLQLD--PDDLSEQLKRQGASIPLVRPGKSTAAFI 1077
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELRRSYQA 435
+ ++ G L++LA ++++ GF+ TSVLI+VG + R QA
Sbjct: 1078 KTVLSNISVLGSAFLAVLAAGPSVVEQITHLTAFRGFA--GTSVLILVGCATDTARKVQA 1135
>gi|396585501|ref|ZP_10485910.1| preprotein translocase, SecY subunit [Actinomyces sp. ICM47]
gi|395546702|gb|EJG14286.1| preprotein translocase, SecY subunit [Actinomyces sp. ICM47]
Length = 430
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 196/422 (46%), Gaps = 27/422 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A++F ++RR+L T ++ R+G FIP PG D + + + S+ +L
Sbjct: 1 MLGAFAQAFRTPDLRRKLLFTLFIMAAFRLGSFIPTPGVDSQAVQRCMAQESQASLLDLV 60
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHKEGQTGQAKLTQYTRYLT 120
Query: 132 LGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
+ IL+A + ++ + +V ++ +++ G + W+ + I+E
Sbjct: 121 IFLGILQATTTISLARSGQLFQSCSEPVIRDQTVLTFIMMIIVMMAGTGVIMWLGELITE 180
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G G SL+I I E L +G + +W + ++ + +V + V V +
Sbjct: 181 RGIGNGMSLLIFTSIAARLPEQLLS-----IGQAGKWGS-VAAIVALLLVVAIAVVYVEQ 234
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
R++ +QY K R+ T YIP IN +G+ PV+ + +LA P ++A
Sbjct: 235 AQRRIPVQYA--KRMIGRRQYGGTTT---YIPLKINMAGVIPVIFASSILALPPMIAQ-F 288
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGAR 362
G P V+ I T Y TIY+ F F I P E+AD + K G
Sbjct: 289 GKPQDAWVQWISGHFTQGST---FYLTIYSLMTLFFAFFYTAITFNPDEVADNMKKYGGF 345
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP + G+ T EYL + G L L I+A ++ L+ + G T++LII
Sbjct: 346 IPGYRAGRPTAEYLRYVINRITSAGALYLVIIALLPSLAIIPLKLSSSQMPFGGTTLLII 405
Query: 423 VG 424
+G
Sbjct: 406 IG 407
>gi|449464360|ref|XP_004149897.1| PREDICTED: preprotein translocase subunit SCY1, chloroplastic-like
[Cucumis sativus]
Length = 571
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 197/426 (46%), Gaps = 40/426 (9%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL----IPQDYL-----SFVSGSVDEL 73
FFK + + + +SR+G +IPL G +R + Q+ L SF G + L
Sbjct: 128 FFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRL 187
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISL 132
G LGI P I A I+ Q+L I P L L+K EG G +KI Y + S+
Sbjct: 188 G---------ICSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKILQYTRYASV 238
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
GFAI++A+ + PY S + V+ + LL G++ ++I + I++ G G+S
Sbjct: 239 GFAIVQAIGQVLFLRPY---VNDFSTEWVLSSVTLLTLGSVVTTYIGERITDLKLGNGTS 295
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
L+I I++ + + +Q + ++ ++ F ++ + V V E RK+ L
Sbjct: 296 LLIFTSIISYLPASFGRTTAQAFQDG--NYVGLVAIIISFFLLVLGIVYVQEAERKIPLN 353
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
Y AS + Y+PF +N SG+ P++ +T LA P LA G +
Sbjct: 354 Y-----ASRYTSRGGGLQKSAYLPFKVNSSGVMPIIFSTSTLALPGTLARFTGLSVLKKA 408
Query: 313 KEILNPETSVGARPWVYYTIY--AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGK 370
LNP G ++ I AFF + + + P ++++ L + GA IP V+PGK
Sbjct: 409 ALALNP----GGSFYLPTNILLIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPGK 462
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIEL 429
+T YL + + G L+ILA +++ GF+ TSVLI+VG +
Sbjct: 463 STASYLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFA--GTSVLILVGCATDT 520
Query: 430 RRSYQA 435
R QA
Sbjct: 521 ARKVQA 526
>gi|256846047|ref|ZP_05551505.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_36A2]
gi|294784822|ref|ZP_06750110.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_27]
gi|256719606|gb|EEU33161.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_36A2]
gi|294486536|gb|EFG33898.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_27]
Length = 426
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 211/423 (49%), Gaps = 32/423 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 81
E+R R+ T ++ +++R+G IP PG D D LS ++ D L GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVD-----VDRLSSMASQSDVLSYINMFSGGAFTR 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ A+++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAVIQGTG 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLIYNPGISFFVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 260
++ + + + G+ ++ +L L+ VT+ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTIQTMQGN--KFLIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
+ +IP +N +G+ PV+ + + P ++ + L P +K L+
Sbjct: 251 KGGMGE-----KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PSTLSIKTTLS--I 301
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTK 378
G VY +YA + F+ F A + P+++A+ L + G IP ++PG+ T+EYL
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFFYTALVFDPEKVAENLKQGGGTIPGIRPGEETVEYLEG 361
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQAY 436
+ + + GG+ L+I++ + Y+ + G + G T ++I+VG ++ + A+
Sbjct: 362 VASRITWGGGIFLAIIS-----ILPYVIFTSMGLPVYFGGTGIIIVVGVALDTIQQIDAH 416
Query: 437 NVM 439
VM
Sbjct: 417 LVM 419
>gi|406657891|ref|ZP_11066031.1| preprotein translocase subunit SecY [Streptococcus iniae 9117]
gi|405578106|gb|EKB52220.1| preprotein translocase subunit SecY [Streptococcus iniae 9117]
Length = 434
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 220/438 (50%), Gaps = 47/438 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 73
+S +R ++F T +I++ RIG I +PG + + + Q + L+ VSG+
Sbjct: 8 DSLKIKSVRHKIFYTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN---- 63
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
A S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL
Sbjct: 64 ----AMRNFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISL 119
Query: 133 GFAILEAV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ I A ++ S+ ++ +VK ++ LL G++ ++W+ + I++ GFG G
Sbjct: 120 VLAFVQSIGITAGFNTLSSVALVSTPNVKTYLLIGALLTTGSVIVTWLGEQITDKGFGNG 179
Query: 191 SSLIICVGILTGYTETLYKM----LSQLLGSSVRWWPFMLGLLGVFTI--VTMWAVVVTE 244
S+II GI++ + + + G+ ++ ++G+L +F I + + V +
Sbjct: 180 VSMIIFAGIISSIPNAIANVHEDYFVNVRGNEMQTSYMIVGIL-IFAILAIVFFTTYVQQ 238
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
K+ +QY KL A S Y+P +NP+G+ PV+ + + PS +
Sbjct: 239 AEYKIPIQYT--KLVQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTIIPFF 289
Query: 305 GS----PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNK 358
+ P+ ++E+ N +T G +YAF + LF+ F + P++ A+ L K
Sbjct: 290 QNGKDIPWLTKLQEVFNYQTPTGM------IVYAFLIILFSFFYTFVQVNPEKTAENLQK 343
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
+ IP+V+PG+ T +Y++ + G + L+ ++ + L ++ G ++G TS
Sbjct: 344 NSSYIPSVRPGRETEQYMSSLLKKLATVGSVFLAFISLAPIAAQQTL-NLSSGIALGGTS 402
Query: 419 VLIIVGSIIELRRSYQAY 436
+LI++ + IE + + Y
Sbjct: 403 LLILISTGIEGMKQLEGY 420
>gi|449524114|ref|XP_004169068.1| PREDICTED: preprotein translocase subunit SCY1, chloroplastic-like
[Cucumis sativus]
Length = 546
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 197/427 (46%), Gaps = 40/427 (9%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL----IPQDYL-----SFVSGSVDE 72
FFK + + + +SR+G +IPL G +R + Q+ L SF G +
Sbjct: 127 DFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGR 186
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 131
LG LGI P I A I+ Q+L I P L L+K EG G +KI Y + S
Sbjct: 187 LG---------ICSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKILQYTRYAS 237
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+GFAI++A+ + PY S + V+ + LL G++ ++I + I++ G G+
Sbjct: 238 VGFAIVQAIGQVLFLRPY---VNDFSTEWVLSSVTLLTLGSVVTTYIGERITDLKLGNGT 294
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SL+I I++ + + +Q + ++ ++ F ++ + V V E RK+ L
Sbjct: 295 SLLIFTSIISYLPASFGRTTAQAFQDG--NYVGLVAIIISFFLLVLGIVYVQEAERKIPL 352
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
Y AS + Y+PF +N SG+ P++ +T LA P LA G +
Sbjct: 353 NY-----ASRYTSRGGGLQKSAYLPFKVNSSGVMPIIFSTSTLALPGTLARFTGLSVLKK 407
Query: 312 VKEILNPETSVGARPWVYYTIY--AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPG 369
LNP G ++ I AFF + + + P ++++ L + GA IP V+PG
Sbjct: 408 AALALNP----GGSFYLPTNILLIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPG 461
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIE 428
K+T YL + + G L+ILA +++ GF+ TSVLI+VG +
Sbjct: 462 KSTASYLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFA--GTSVLILVGCATD 519
Query: 429 LRRSYQA 435
R QA
Sbjct: 520 TARKVQA 526
>gi|291437819|ref|ZP_06577209.1| preprotein translocase subunit secY [Streptomyces ghanaensis ATCC
14672]
gi|291340714|gb|EFE67670.1| preprotein translocase subunit secY [Streptomyces ghanaensis ATCC
14672]
Length = 437
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 210/436 (48%), Gaps = 36/436 (8%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF- 76
A +F ++R++L T +IV+ RIG IP+PG D R + D G + F
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVVYRIGTNIPIPGVDYRNVQACIDNAEANQGLFGLVNMFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ A
Sbjct: 66 GGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYLTVALA 125
Query: 136 ILEAVIVACYSLPYSIY----AASHSV--KHVMVTAFLLV---CGAMTMSWICDTISESG 186
+L+ + + +++ AS V + + VT +++ G + W+ + I++ G
Sbjct: 126 VLQGTGLVATARSGALFQGCPVASQIVPDQSIFVTVTMVITMTAGTAVVMWLGELITDRG 185
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW-PFMLGLLGVFTIVTMWAVVVTEG 245
G G S+++ + I + L+ + Q GS W F +L F +V + V V +
Sbjct: 186 IGNGMSILMFISIAATFPSALWAIKEQ--GSLADGWIEFGTVMLVGFVMVAL-VVFVEQA 242
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA---- 301
R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 243 QRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIVQFSN 297
Query: 302 SILGSPFWQHVKEILNPETSVGARPWV--YYTIYAFFVFLFNIFDIANLPKEIADYLNKM 359
S G W I GA P + Y+ + FF F + I P+E+AD + K
Sbjct: 298 SNAGWATW-----ITKNLADTGATPHIILYFLLIVFFAFFY--VAITFNPEEVADNMKKY 350
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G IP ++ G+ T EYL+ + + G L L +++ T+ N+ F G TS+
Sbjct: 351 GGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLISLVPTMALAGFGA-NQNFPFGGTSI 409
Query: 420 LIIVGSIIELRRSYQA 435
LIIVG +E + ++
Sbjct: 410 LIIVGVGLETVKQIES 425
>gi|336326404|ref|YP_004606370.1| preprotein translocase subunit [Corynebacterium resistens DSM
45100]
gi|336102386|gb|AEI10206.1| preprotein translocase subunit [Corynebacterium resistens DSM
45100]
Length = 442
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 200/424 (47%), Gaps = 32/424 (7%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS----VDELGDF 76
+F +++R+++ T +IV+ R+G IP PG D I S + S + L
Sbjct: 6 SAFKNADLRKKILFTLAMIVLFRVGSQIPTPGVDYAAITNQIKSLTNNSAVYSLINLFSG 65
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y ++++ A+
Sbjct: 66 GALLRLSVFAVGIMPYITASIIIQLLTVVIPKFEQLKKEGQTGQAKMTEYTRYLTVALAL 125
Query: 137 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC-------GAMTMSWICDTISESGFGQ 189
L++ + + + V V F LV GA+ + W+ + I++ G G
Sbjct: 126 LQSAGIVALADRKQLLGQGIPVLKDNVGVFGLVTMVLVMTSGAVLVMWLGELITDRGIGN 185
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
G SL+I GI T +L + + +L SS P ++ I+ + V + +G R++
Sbjct: 186 GMSLLIFAGIAT----SLPREGATILQSS--GGPVFAAVVVGVLILVVGVVFMEQGQRRI 239
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSP 307
+QY K R+ E Y+P +N +G+ PV+ + LL P ++ I+ GSP
Sbjct: 240 PVQYA--KRMIGRRQYG---ETSTYLPLKVNQAGVIPVIFASSLLTVPILITQIIQSGSP 294
Query: 308 FWQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARI 363
H SV P W Y IY + F+ F + P + AD + K G I
Sbjct: 295 QAAHDNWWNRNVMSVLHNPAAWQYIVIYLAMIIFFSFFYVSVQYDPNDQADNMKKYGGFI 354
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI----NEGFSIGFTSV 419
P ++PG+ T EYL + G + L ++A IL + + N+ G T++
Sbjct: 355 PGIRPGRPTAEYLGYVMNRLLVVGSVYLGLIAILPNILINMGVQTSAAGNQSMPFGGTAI 414
Query: 420 LIIV 423
LI+V
Sbjct: 415 LILV 418
>gi|291521881|emb|CBK80174.1| protein translocase subunit secY/sec61 alpha [Coprococcus catus
GD/7]
Length = 442
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 207/423 (48%), Gaps = 34/423 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDFGAELKLSF 84
EI++RL T +++V+ R G IP+PG R + + + +G++D ++ G+ ++S
Sbjct: 19 EIQKRLLFTFLILVVVRFGAQIPIPGVSRDVFASWFANQSNGAMDLFDMMTGGSFSQMSV 78
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
F L I+P I +SI+MQ++ I+PSL +++K+ DG EK+K Y +++S+ V+ A
Sbjct: 79 FALSITPYITSSIIMQLMTIIIPSLEEMQKDQ-DGREKMKEYTFYLSI-------VLAAI 130
Query: 145 YSLPYSI------YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
SL I Y AS + +++ LV GA + ++ + I++ G G G S+I+
Sbjct: 131 QSLAMGIGFYRGGYLASKNAMGLVIVVVALVTGACVLIYLGEEITKHGVGNGVSMILLFN 190
Query: 199 ILTGYTETLYKMLSQLLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
I++ + + + V+ ++ ++ V + ++ V + + K+ +Q
Sbjct: 191 IISRLPQDFKTLYDTFMSGKNIVKAGLALIIIVAVILFMFVFVVYLQDAYIKIPVQN--- 247
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---SPFWQHVK 313
+S + + V YIPF +N + + PV+ L++ PS++ + G S +
Sbjct: 248 --SSKVQGRRSVGSVGDYIPFKVNSANVIPVIFAGSLMSLPSLITTFAGKTPSGILGEII 305
Query: 314 EILNPETSVGARPWVY---YTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKP 368
++LN VY IY V F F I P E+A+ L + G+ IP +P
Sbjct: 306 KVLNQNNWFNMSAPVYSIGVIIYIVLVVAFAYFYTSITFNPVEVAERLKERGSFIPGHRP 365
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
GK T EYL + ST G + L I+A + S G TS++IIVG IIE
Sbjct: 366 GKQTAEYLQSVSNSTIVIGAVGLLIVALVPIVFSGLF---GADVSFGGTSLIIIVGVIIE 422
Query: 429 LRR 431
R
Sbjct: 423 TIR 425
>gi|254785099|ref|YP_003072527.1| preprotein translocase, SecY subunit [Teredinibacter turnerae
T7901]
gi|237685019|gb|ACR12283.1| preprotein translocase, SecY subunit [Teredinibacter turnerae
T7901]
Length = 441
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 204/422 (48%), Gaps = 23/422 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 80
E+ RL + IV+ R+G IP+PG D + Q + + G++ LG F GA
Sbjct: 10 GELWARLKFLFLAIVVYRLGTHIPVPGIDPEQVAQLF-NQNQGTI--LGMFNMFSGGALE 66
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA- 139
++S LGI P I ASI+MQ++ + PSL L+KEG G KI Y ++++ A ++A
Sbjct: 67 RMSILALGIMPYISASIIMQMMSSVTPSLEALKKEGESGRRKISQYTRYLTVALATVQAF 126
Query: 140 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
V+VA S YA ++ LV G++ M W+ + ++E G G G S++I GI
Sbjct: 127 VMVAGMSGQGMAYAGMPVFSFYLIAVTSLVTGSVFMMWLGEQVTERGIGNGISMLIFAGI 186
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKL 258
+ G + + + + L IV W VV E G R++ +QY +
Sbjct: 187 VAGLPSAVGQAFESARQGDLHVLMLLALLFAAVAIV--WFVVRMERGQRRITIQYARRQA 244
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
A + T ++P IN +G+ PV+ + +L FP+ +A G+ EIL
Sbjct: 245 AGRMGQGPAQTS---HLPLKINMAGVIPVIFASSILLFPASIAQWFGNASEGKAAEILQE 301
Query: 319 -ETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEY 375
+G + + I+A + F A + PKE+AD L + GA IP ++PG+ + +Y
Sbjct: 302 VALMIGPGQPLNFVIFAVLIVAFCFIYTAMMYNPKEVADNLKRGGAYIPGIRPGEQSAKY 361
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQ 434
+ + G + ++ +A +L +L N F +G TS+LI+V +++ Q
Sbjct: 362 IDNVLTRLTVVGSVYIAAVA----LLPQFLMVSANVPFYLGGTSLLIVVVVVMDFMSQVQ 417
Query: 435 AY 436
++
Sbjct: 418 SH 419
>gi|425745952|ref|ZP_18863986.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-323]
gi|425487098|gb|EKU53457.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-323]
Length = 440
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 208/428 (48%), Gaps = 34/428 (7%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR +F+ L+V R+G IPLPG D + Q F + LG F GA
Sbjct: 11 YREIIRRLMFLIGALLVF-RLGAHIPLPGIDNVALAQ---FFKANEGTFLGLFNMFSGGA 66
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y + +L A+++
Sbjct: 67 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRYGTLFLALVQ 126
Query: 139 AVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ + + I S +V VT+ LV G M + W+ + I+E G G G S+II
Sbjct: 127 GIGMCAGLISQGITLTSGLAFYVPAVTS--LVAGTMFLMWLGEQITERGVGNGISMIIFA 184
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYY 254
GI+ G L ++ Q S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 185 GIVAG----LPNLVIQSFTSVQNGQGSLIGLVVFGLLSLAVLAAIVFIEKAQRRIPVNY- 239
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS--PFWQHV 312
A + T + ++P IN +G+ P + + LL FP+ L LGS P V
Sbjct: 240 ----AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGIV 295
Query: 313 KEILNPETSV--GARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKP 368
K L V +P +Y ++ + F F A + PKE+++ L + GA +P ++P
Sbjct: 296 KRSLQDLALVLSPGQP-LYLMLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRP 354
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G+ T YL I F G + ++++ +L F +G TS+LI+V +++
Sbjct: 355 GEQTARYLDHILNRLTFIGAIYITVVCLMPMVLQ---SSFGIPFHLGGTSLLIVVVVVMD 411
Query: 429 LRRSYQAY 436
QA+
Sbjct: 412 FMAQLQAH 419
>gi|410454369|ref|ZP_11308308.1| preprotein translocase subunit SecY [Bacillus bataviensis LMG
21833]
gi|409932184|gb|EKN69151.1| preprotein translocase subunit SecY [Bacillus bataviensis LMG
21833]
Length = 431
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 212/427 (49%), Gaps = 36/427 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP-QDYLSFVSGSVDELGDFGAELKLSF 84
+IRR++ T +++V+ R+G FIP+P + ++ QD LS V G ++ G GA + S
Sbjct: 12 GDIRRKIIFTLLMLVVFRLGTFIPVPNVNADVLANQDKLS-VFGILNTFGG-GALKQFSI 69
Query: 85 FQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F +GI P I ASI++Q+L +VP + K+G G KI + ++ ++A+
Sbjct: 70 FAMGIMPYITASIIIQLLQMDVVPKFTEWSKQGESGRRKIAQITRYFTIVLGFIQAL--- 126
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMT-----MSWICDTISESGFGQGSSLIICVG 198
S ++ A+ +++ + +LL+ +T + W+ + I+E G G G S+II G
Sbjct: 127 GMSYGFNNLASGQLIENPGIGTYLLIAVTLTAGTAFLMWLGEQITEKGVGNGISIIIFAG 186
Query: 199 ILTGYTETLYKMLSQLLGSS-----VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
I+ G + ++ Q ++ +R +L L V IV + + + + RK+ +QY
Sbjct: 187 IVAGMPSVINQIYVQQFENAGEAIFLRIVTVVLIALAVIAIV-VGVIFIQQANRKIPIQY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---PFWQ 310
K A R +P+ ++P +N +G+ PV+ + P +AS G+ W
Sbjct: 246 A--KRVVAGR--NPVGGQSTHMPLKVNAAGVIPVIFAVSFIVTPRTIASFFGTNDVTLW- 300
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGARIPNVKP 368
+ + L+ +G T+YA + F F I P++ A+ L K IP ++P
Sbjct: 301 -INKNLDYSHPIG------MTLYAILIIAFTYFYAFIQVNPEQAAENLQKQSGYIPGIRP 353
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
GK+T EYLT++ F G + L+++A + + + + IG TS+LI+VG ++
Sbjct: 354 GKSTQEYLTRVLYRLTFVGAIFLTVIAVLPMLFIK-IANLPQSAQIGGTSLLIVVGVALD 412
Query: 429 LRRSYQA 435
+ +A
Sbjct: 413 TYKQLEA 419
>gi|425447769|ref|ZP_18827751.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9443]
gi|389731598|emb|CCI04363.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9443]
Length = 439
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 197/402 (49%), Gaps = 25/402 (6%)
Query: 45 GYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCH 104
G F+P+PG DR + + + + +L G L F LGI P I ASI++Q+L
Sbjct: 41 GMFVPIPGLDRARLAEIIQGNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLLTA 100
Query: 105 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 163
+PSL L+K EG G KI +I+ G++I++++ + L + + ++ +
Sbjct: 101 ALPSLEDLQKNEGEAGRRKIAQITRYIAFGWSIIQSIGI-TLGLLVANGVVAGTLPSIAA 159
Query: 164 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP 223
T LV G+M + WI + I+E G G G+SL+I V I+ +TL ++ +
Sbjct: 160 TVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQAIA 219
Query: 224 FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINP 281
++ LL VF ++ + V V EG R++ + SA R+ E Y+P +N
Sbjct: 220 QVVILLLVFLVMIIGIVFVQEGTRRI-------PIVSARRQVGRRLYRERTSYLPLRLNQ 272
Query: 282 SGMQPVLTTTYLLAFPSILASIL--GSPFWQHVKEILNPETSVGARP--WVYYTIYAFFV 337
G+ P++ + +L P L L +P Q + +++N RP W Y Y+ +
Sbjct: 273 GGVMPIIFASAVLVLPFQLVQALPRDNPVGQVLVQLVN-----ALRPDSWGYVAFYSLLI 327
Query: 338 FLFNIF---DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSIL 394
F+ F I N PK+++ L KMG IP ++PG AT YL + G L LS++
Sbjct: 328 LGFSFFYSSLIVN-PKDMSQNLKKMGTSIPGIRPGTATTNYLEGVLNRLTLLGALFLSLV 386
Query: 395 ATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
AT T+++ + +G TS+LI+VG I+ + Q Y
Sbjct: 387 ATVPTLVESA-TGVTTFRGLGATSLLILVGVAIDTAKQIQTY 427
>gi|331702060|ref|YP_004399019.1| preprotein translocase subunit SecY [Lactobacillus buchneri NRRL
B-30929]
gi|406027533|ref|YP_006726365.1| Preprotein translocase subunit SecY [Lactobacillus buchneri CD034]
gi|329129403|gb|AEB73956.1| preprotein translocase, SecY subunit [Lactobacillus buchneri NRRL
B-30929]
gi|405126022|gb|AFS00783.1| Preprotein translocase subunit SecY [Lactobacillus buchneri CD034]
Length = 438
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 214/436 (49%), Gaps = 32/436 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ A++F +IR ++ T ++VI R+G +I +PG + + + SG V L
Sbjct: 1 MLSTLAKAFKVKDIRNKMLFTLFVLVIFRLGAYITVPGINAKALTS---VASSGLVSILN 57
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
F G S F +G+SP I A I++Q+L IVP V+ K+G G K+ + +++
Sbjct: 58 TFSGGGLTNYSIFAMGVSPYITAQIIIQLLQMDIVPKYVEWGKQGEVGRRKLNQHTRYLT 117
Query: 132 LGFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+ A ++V I A ++ S+ + S+K ++ +L G M +W+ D I+E G G
Sbjct: 118 VILAFFQSVGITAGFNQLSSLNLVQNPSIKTFVIIGLILTGGTMLTTWMGDMITERGLGN 177
Query: 190 GSSLIICVGILTGYTETLYKMLSQL---LGSSVRWWP--FMLGLLGVFTIVTMWAVVVTE 244
G S+II GI+ L + +Q + + W P F + LL + ++ + V +
Sbjct: 178 GISMIIFAGIIARIPVGLQSLWTQYFVGVSGADLWQPILFAIALLIIVLVIVTFVTWVQQ 237
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASI 303
R+V +QY + S + + S Y+P +N +G+ PV+ + +A P +IL +
Sbjct: 238 AERRVPIQYT--RRVSGSPDSS-------YLPLKVNVAGVIPVIFASSFIATPQTILMAF 288
Query: 304 LG----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKM 359
+ ++Q + + N +T GA +YTI F F N P+++++ L K
Sbjct: 289 TNNYSTATWFQVLNNLFNMQTPTGA---AFYTILIIMFTFFYAFVQVN-PEKLSENLQKQ 344
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G+ IP V PG T Y++ + G L L ++A I + L ++E +G TS+
Sbjct: 345 GSYIPGVWPGHETQSYVSDLLMKLSTVGALFLGVVALIPLIAQN-LWNLDESIGLGGTSL 403
Query: 420 LIIVGSIIELRRSYQA 435
LI+VG IE R +
Sbjct: 404 LIVVGVAIETIRQIRG 419
>gi|269798530|ref|YP_003312430.1| preprotein translocase subunit SecY [Veillonella parvula DSM 2008]
gi|269095159|gb|ACZ25150.1| preprotein translocase, SecY subunit [Veillonella parvula DSM 2008]
Length = 420
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 210/432 (48%), Gaps = 35/432 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L++ + F +E+R ++ T ++ + R G IP+PG D +I F SG++ L
Sbjct: 1 MLDSLSNIFKITELRNKILYTLMMFAVFRAGIHIPVPGVDASVIES---LFTSGNLFGLL 57
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
D GA K S F + I+P I ASI+MQ+L +VP K+G DG +KI + +
Sbjct: 58 DLFAGGALSKFSIFAMSITPYINASIIMQLLQSVVPQFEAWSKDGEDGRKKIAKVTRYGT 117
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+ ++A +A ++L + ++ V V A +L G + WI + I+ G G G
Sbjct: 118 VVLGFVQAAGMA-FALRANNALVNNDFLSVFVVAIILTAGTCLLMWIGEQITAYGIGNGI 176
Query: 192 SLIICVGI---LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
SLII GI L ET+Y+ + G+ + F+ ++ + I + V VT+G R+
Sbjct: 177 SLIIFAGIVARLPDGLETIYQYIQN--GTINMFQAFLFAVIALAMIAVV--VAVTQGQRR 232
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY A ++P +N +G+ P++ + +L FP +A + + F
Sbjct: 233 IPIQY-----AKRVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSVLMFPVTIAQFIDNEF 287
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKMGARIPN 365
V ++ T + +YA +F+F F A N+ ++AD + K G IP
Sbjct: 288 VHKVADLFTWGTPLQT------ALYAILIFIFTYFYTAISINI-TDMADNMKKYGGFIPG 340
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSVLIIV 423
++ GK T +Y+ + G + L+++A I+ ++L I +G G T++LI+V
Sbjct: 341 IRAGKPTADYVDNVMTKITLAGAVFLAVVA----IIPNFLGSITGVQGVYFGGTALLIVV 396
Query: 424 GSIIELRRSYQA 435
G ++ + ++
Sbjct: 397 GVALDTMQQIES 408
>gi|193211871|ref|YP_001997824.1| preprotein translocase subunit SecY [Chlorobaculum parvum NCIB
8327]
gi|193085348|gb|ACF10624.1| preprotein translocase, SecY subunit [Chlorobaculum parvum NCIB
8327]
Length = 441
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 213/442 (48%), Gaps = 37/442 (8%)
Query: 16 LNNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
LN + + K E+R+R+ T +L+ + R+G I +PG D I + S S D G
Sbjct: 3 LNESIRNINKIPELRQRILYTLLLLFVYRLGSHITIPGVDAAAI---ASATTSHSNDLFG 59
Query: 75 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
F GA + S F LGI P I ASI++Q+L + P + +L++EG +G +KI Y +
Sbjct: 60 LFDLFVGGAFARASIFSLGIMPYISASIIIQLLGAVTPFVQKLQQEGEEGRQKINQYTRY 119
Query: 130 ISLGFAILEAVIVAC-YSLPYS---IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 185
++ A L+A V+ S P S + S+ + +L + + W+ + I+E
Sbjct: 120 GTVLLAFLQAWGVSVNLSSPSSFGKVVVPDPSIFFTITAIVILTASTVFIMWLGELITER 179
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G G SLII +GIL + ++L + Q + + W + ++G+ + V++T
Sbjct: 180 GIGNGISLIIMIGILARFPQSLVAEI-QSVSFGSKNWIVEIVIMGLMAAIVAIVVLLTVA 238
Query: 246 CRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
R++ +Q+ G K+ + YIP +N +G+ P++ ++ PS
Sbjct: 239 TRRIPVQHAKRVVGRKVYGGGTQ---------YIPMKVNTAGVMPIIFAQSIMFLPSTFL 289
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKM 359
S F+ + + ++ W Y I+ + F F IA PKE+AD + +
Sbjct: 290 S-----FFPESEAMQKIASAFAYDSWWYAIIFGLMIVFFTYFYTAIAFNPKEVADTMRRQ 344
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--IGFT 417
G IP V+PGK+T E++ I G + L+++A T L + + GF+ G T
Sbjct: 345 GGFIPGVRPGKSTEEFIDNILTRITLPGAIALAVIAVLPTFLTKF-GNVTPGFAQFFGGT 403
Query: 418 SVLIIVGSIIELRRSYQAYNVM 439
S+LIIV ++ + +++ +M
Sbjct: 404 SLLIIVSVGLDTLQQVESHLMM 425
>gi|86135788|ref|ZP_01054367.1| preprotein translocase SecY [Roseobacter sp. MED193]
gi|85826662|gb|EAQ46858.1| preprotein translocase SecY [Roseobacter sp. MED193]
Length = 454
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 204/419 (48%), Gaps = 23/419 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS---GSVDELGDFGAELKL 82
+++R R+ T L+++ R+G FIP+PG D + ++++ G + + GA ++
Sbjct: 21 TDLRNRILFTLGLLIVYRLGTFIPVPGIDANAL-RNFMEAAGQGIGGMVSMFTGGALGRM 79
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
F LGI P I ASI++Q+L +VP+L QL+KEG G +KI Y + ++ A +A +
Sbjct: 80 GIFALGIMPYISASIIVQLLTSMVPALEQLKKEGAQGQKKINQYTRYGTVALATAQAYGL 139
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
A SL A + M LV G M + W+ + I++ G G G SLII VGI+
Sbjct: 140 AV-SLEAGDLATDPGMYFRMACMITLVGGTMFLMWLGEQITQRGLGNGISLIIFVGIIAE 198
Query: 203 YTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 261
++ + + G S P ++G++ + V M+ V + RK+ +QY ++
Sbjct: 199 VPASIAQFFAS--GRSGAISPAVIIGVILMVIAVIMFVVFMERALRKIHIQYPRRQVGMK 256
Query: 262 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETS 321
+ ++P +NP+G+ P + + LL P+ +++ V L
Sbjct: 257 VYDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPTTISAFSSGATNGPVMSWLLANFG 311
Query: 322 VGARPWVYY--TIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKI 379
G ++ + ++ FF + + F++A P+++A+ L +P ++PGK T EY+ +
Sbjct: 312 PGQPLYLLFFVSMIVFFAYFYT-FNVAFKPEDVANNLKNQNGFVPGIRPGKKTAEYIEYV 370
Query: 380 QASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQAY 436
G L L+++ +L R F + G TSVLI+V ++ + Q++
Sbjct: 371 VNRVLVLGSLYLALVCLLPEVL-----RGQFAFPVYFGGTSVLIVVSVTMDTIQQAQSH 424
>gi|302558974|ref|ZP_07311316.1| preprotein translocase, SecY subunit [Streptomyces griseoflavus
Tu4000]
gi|302476592|gb|EFL39685.1| preprotein translocase, SecY subunit [Streptomyces griseoflavus
Tu4000]
Length = 437
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 213/438 (48%), Gaps = 30/438 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDE 72
+L A +F ++R++L T +IV+ R+G IP+PG D R + D G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVVYRVGTHIPIPGVDYRNVQTCIDAAQANQGLFGL 60
Query: 73 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ F GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYL 120
Query: 131 SLGFAILEAVIVACYSLPYSIY----AASHSV--KHVMVTAFLLV---CGAMTMSWICDT 181
++ AIL+ + + +++ AS V + + VT +++ G + W+ +
Sbjct: 121 TVALAILQGTGLVATARSGALFQGCPVASQIVPDQSIFVTITMVITMTAGTAVVMWLGEL 180
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
I++ G G G S+++ + I + L+ + Q GS W ++ V ++ V
Sbjct: 181 ITDRGIGNGMSILMFISIAATFPSALWAIKEQ--GSLAGGWIEFGTVIAVGLVMVGLVVF 238
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++A
Sbjct: 239 VEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIA 293
Query: 302 SI-LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLN 357
G+ W K + G P +Y ++Y + F F +A N P+E+AD +
Sbjct: 294 QFSSGTSGW---KTWIEAHLVRGDHP-IYVSLYFLLIVFFAFFYVAISFN-PEEVADNMK 348
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G T
Sbjct: 349 KYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALVGFGA-NQNFPFGGT 407
Query: 418 SVLIIVGSIIELRRSYQA 435
S+LIIVG +E + ++
Sbjct: 408 SILIIVGVGLETVKQIES 425
>gi|424741403|ref|ZP_18169756.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-141]
gi|422944792|gb|EKU39769.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-141]
Length = 452
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 212/432 (49%), Gaps = 42/432 (9%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 23 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 78
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLESLKKEGEQGKRKINQYTRQGTLLLAVVQ 138
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
AV + C L S ++ + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 AVGM-CAGLIGQGITLSVGLEFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 197
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 255
I++G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 198 IVSG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSVGVLAAIVFIEKAQRRIPVNY-- 251
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP-------- 307
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADANAGFIK 308
Query: 308 -FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
Q + +L+P +P +Y ++ + F F A + PKE+++ L + GA +P
Sbjct: 309 RSLQDLALVLSP-----GQP-LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVP 362
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG+ T YL I F G + ++++ IL FS+G TS+LI+V
Sbjct: 363 GIRPGEQTARYLDHILNRLTFIGAIYITVICLMPMILQ---SSFGIPFSLGGTSLLIVVV 419
Query: 425 SIIELRRSYQAY 436
+++ QA+
Sbjct: 420 VVMDFMAQLQAH 431
>gi|33519678|ref|NP_878510.1| preprotein translocase subunit SecY [Candidatus Blochmannia
floridanus]
gi|33517341|emb|CAD83726.1| preprotein translocase subunit secY [Candidatus Blochmannia
floridanus]
Length = 451
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 205/425 (48%), Gaps = 33/425 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
++++R+ ++I RIG FIP+PG D ++ + +D L F G+ + S
Sbjct: 23 DLKQRIIFIVGALIIFRIGSFIPIPGVDLTVLSKILQEQQGTIIDMLNIFSGGSLSRASI 82
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA--VIV 142
F LGI P I ASI++Q+L + P+L++++KEG G I YI + +L L++ +++
Sbjct: 83 FSLGIMPYISASIIVQLLTTVHPTLIEIKKEGESGRRAINRYIRYGTLILGTLQSLGIVI 142
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
++P + + V V + LV G + + W+ D I+ G G G S+II GI+ G
Sbjct: 143 GLPNIPNLVINPGFNFYFVAVIS--LVSGTIFLMWLGDQITNHGIGNGISVIIFSGIVAG 200
Query: 203 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
+ + Q+ + + ++ +L + V +I T + V + G R++ + Y K
Sbjct: 201 LPAAIGHTIEQVRQNELHFFVLVLIVCLVISI-TFFVVFMERGQRRILVHYANPKRQQGR 259
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH-----VKEILN 317
R S ++P +N +G+ P + + ++ FPS + S H V L
Sbjct: 260 RMYSTQQGNSTHLPLKVNMAGVIPAIFASSIILFPSTIISWFSRGVSHHRWLHIVSTYLQ 319
Query: 318 PETSVGARPWVYYTIYA----FFVFLFN--IFDIANLPKEIADYLNKMGARIPNVKPGKA 371
P +Y IY+ FF F + +F+ P++ AD L K GA +P ++PG+
Sbjct: 320 PGQ------LLYILIYSSAIIFFCFFYTSLVFN----PRDTADNLKKSGAFVPGIRPGEQ 369
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELR 430
T +Y+ KI F G + ++ + ++ ++R + F G TS+LI+V I+E
Sbjct: 370 TAKYINKIILRLTFAGSMYVTFIC----LVPEFMRISMKVPFYFGGTSLLIVVVVIMEFM 425
Query: 431 RSYQA 435
Q
Sbjct: 426 TQIQT 430
>gi|237743919|ref|ZP_04574400.1| protein translocase subunit secY [Fusobacterium sp. 7_1]
gi|422933510|ref|ZP_16966430.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
gi|229432950|gb|EEO43162.1| protein translocase subunit secY [Fusobacterium sp. 7_1]
gi|339891551|gb|EGQ80512.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 426
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 213/423 (50%), Gaps = 32/423 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 81
E+R R+ T ++ +++R+G IP PG D D LS ++ D L GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVD-----VDRLSSMASQSDVLSYINMFSGGAFTR 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ A+++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGEAGRNRITQWTRYLTIALAVIQGTG 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLIYNPGISFFVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 260
++ + + + G+ ++ +L L+ VT+ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTIQTMQGN--KFLVPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
I E + +IP +N +G+ PV+ + + P ++ + L P +K L+
Sbjct: 251 KGG----IGE-KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PSTLSIKTTLS--I 301
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTK 378
G VY +YA + F+ F A + P+++A+ L + G IP ++PG+ T+EYL
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFFYTALIFDPEKVAENLKQGGGTIPGIRPGEETVEYLEG 361
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQAY 436
+ + + GG+ L+I++ + Y+ + G + G T ++I+VG ++ + A+
Sbjct: 362 VASRITWGGGIFLAIIS-----ILPYVIFTSMGLPVYFGGTGIIIVVGVALDTIQQIDAH 416
Query: 437 NVM 439
VM
Sbjct: 417 LVM 419
>gi|229818220|ref|ZP_04448502.1| hypothetical protein BIFANG_03518 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229784471|gb|EEP20585.1| hypothetical protein BIFANG_03518 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 445
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 209/431 (48%), Gaps = 28/431 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LG 74
++ E+R+++ +I+I RIG FIP PG D +++ Q ++ +SG+ + L
Sbjct: 6 QALKTKELRKKILFVLFIIIIYRIGSFIPTPGVDYKVV-QKCVTTLSGNQENFIGLVNLF 64
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 65 SGGAMLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGETKLTQYTRYLTIGL 124
Query: 135 AILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
A+L++ + A ++ S SV +++V ++ G + W+ + I++ G
Sbjct: 125 AVLQSTTILVTARSGALFNYQCSQVIPDGSVWNLVVMVMIMTGGTGLIMWMAELITDKGI 184
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 246
GQG S++I + I +G+ L+++ G + W F + + + I+ V E C
Sbjct: 185 GQGMSVLIFMSICSGFLPQLWEIGYGTNGKNGDWGKFAIVVSVLVVILIF--VDFVELCQ 242
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R++ +QY + S Y+P IN SG+ P + + +LA P+++A G+
Sbjct: 243 RRIPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGN 296
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
VK I N + W Y +YA + F F I P E AD + + G IP
Sbjct: 297 SDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFFYTSITFNPDETADNMKQYGGFIP 354
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++ G AT YLT + G + L +A T+L L +N G T++LII G
Sbjct: 355 GIRAGSATSRYLTYVMNRLNTVGAVYLLFVALIPTVLIMAL-NLNAKLPFGGTTILIIAG 413
Query: 425 SIIELRRSYQA 435
++ R +A
Sbjct: 414 VGLDTLRQAKA 424
>gi|383784167|ref|YP_005468736.1| preprotein translocase subunit [Leptospirillum ferrooxidans C2-3]
gi|383083079|dbj|BAM06606.1| preprotein translocase subunit [Leptospirillum ferrooxidans C2-3]
Length = 437
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 217/450 (48%), Gaps = 32/450 (7%)
Query: 9 FIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG 68
F R+S V+ N + E+R+R+ T ++ + RIG +IP PG + + YL G
Sbjct: 2 FERISKVIGNIGKI---PELRQRILFTLGMLAVYRIGAYIPTPGVNGNAL-SAYLHQNGG 57
Query: 69 SVDELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKS 125
++ D GA +L+ F LGI P I ASI++Q+L + PSL L KEG G + I
Sbjct: 58 ALIGFFDMFSGGALSRLTIFALGIMPYISASIILQLLTVVHPSLQALAKEGERGRKVITK 117
Query: 126 YIWWISLGFAILEA--VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTIS 183
Y ++++ A++++ + + S+ + ++ L + W+ + I+
Sbjct: 118 YTRYLTVLIALIQSFGIAIGLESMNRGQFVPHPGWPFRILVVITLTTATTFIMWLGEQIT 177
Query: 184 ESGFGQGSSLIICVGILTGYTETL---YKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
E G G G SLII GI+ + YK+ +Q + + ++GL+ + ++ V
Sbjct: 178 ERGVGNGISLIIFSGIIARLPSAILNTYKLYNQ---GEISGF-LIIGLVVMVAVIVGSIV 233
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
+ RKV +QY A + + YIP IN +G+ P + + L+AFP+ +
Sbjct: 234 FIETARRKVPVQY-----AKRLVGNKMMGGQSTYIPLKINTAGVIPPIFASSLIAFPATI 288
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNK 358
AS + P+ Q++ + L P + + Y +Y + F+ F A + P +IA+ + K
Sbjct: 289 ASFITLPWIQNIGKSLAPGS------FSYTLLYVLLIIFFSFFYTAVVLNPADIAENMQK 342
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
G IP ++PG+ T + I G L LS++ +L + +++ F G TS
Sbjct: 343 YGGYIPGIRPGQNTSTFFYGIMNRITLVGALYLSLVCVVPELLIY---KLHVPFYFGGTS 399
Query: 419 VLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+LI++G ++ + ++Y + + L++
Sbjct: 400 LLIVIGVSLDTAQQIESYMMSKNYDGFLKK 429
>gi|365128123|ref|ZP_09340439.1| preprotein translocase, SecY subunit [Subdoligranulum sp.
4_3_54A2FAA]
gi|363623470|gb|EHL74589.1| preprotein translocase, SecY subunit [Subdoligranulum sp.
4_3_54A2FAA]
Length = 439
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 214/440 (48%), Gaps = 46/440 (10%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
++R++L T ++IVI R+G IP+P F Q +++ SGS+ D G+ +
Sbjct: 12 EDLRKKLLYTLLVIVIFRLGCAIPVP-FIAPEALQGWVAGQSGSMLGYIDMLTGGSFSRA 70
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
+ F L ++P I ASI++Q+L +P+L +L KEG DG +K+ + G A+ A+ +
Sbjct: 71 TLFALSVTPYINASIIIQLLTVAIPALERLSKEGEDGRKKLTRITRYTGAGIAL--ALGI 128
Query: 143 ACYSLPYS----IYAASHSVKHVMVTAFLLV----CGAMTMSWICDTISESGFGQGSSLI 194
Y L +Y + + + +A +++ G++ + W+ + I G G G S++
Sbjct: 129 GYYFLLRGQGALVYGSGAQMFAQVFSAIVVILAFTAGSLLIQWLGEQIDVKGIGNGISIL 188
Query: 195 ICVGILTGYTE---TLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVK 250
I GI++ +T T+ L G V+++ F++ + V I V ++ V++ R++
Sbjct: 189 IFAGIVSRWTSIFTTIKTWLGFAAGGEVKYY-FLIPVFVVLAISVIVFIVILNAAERRIP 247
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
+QY A +IP +N SG+ PV+ F S LASI G+
Sbjct: 248 VQY-----AKRVVGRKMYGGQSTHIPIKVNMSGVMPVI-------FASALASIPGT-IGG 294
Query: 311 HVKEILNPETSVGARP---------WVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKM 359
+ NP+ A P WVY IY + FN F +A P EIA+ L
Sbjct: 295 FFPNLYNPDLHPFAAPFLGMFSTNGWVYAAIYLLLIIAFNYFYVAMQYNPVEIANNLRNN 354
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
IP +PGK T +++TK+ F G L L ++A +L + E S+G TS+
Sbjct: 355 NGTIPGYRPGKPTSDFITKVLGKITFIGALFLGVVAVMPIVLGNV---TGENISLGGTSL 411
Query: 420 LIIVGSIIELRRSYQAYNVM 439
LI+VG ++ RS ++Y +M
Sbjct: 412 LIVVGVALDTSRSLESYMLM 431
>gi|120553672|ref|YP_958023.1| preprotein translocase subunit SecY [Marinobacter aquaeolei VT8]
gi|387813038|ref|YP_005428519.1| preprotein translocase subunit SecY [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|120323521|gb|ABM17836.1| protein translocase subunit secY/sec61 alpha [Marinobacter
aquaeolei VT8]
gi|381338049|emb|CCG94096.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 440
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 215/438 (49%), Gaps = 34/438 (7%)
Query: 11 RLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DR--RLIPQDYLSFV 66
+ +S+ A + F +E+R RL+ + +++ RIG IP+PG DR L Q+ + +
Sbjct: 3 KTASLPAGAGKGF--AELRSRLWFVFLALLVYRIGAHIPVPGINPDRLAALFDQNQGTIL 60
Query: 67 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 126
S + + GA ++S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y
Sbjct: 61 S--LFNMFSGGALERMSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQY 118
Query: 127 IWWISLGFAILEAVIVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 185
+ ++ A+++ ++ + + S S V V +F VCGA+ M W+ + I+E
Sbjct: 119 TRYGTVILALVQGFGISVGLASQGVTFNDSFSFHFVAVVSF--VCGAVFMMWLGEQITER 176
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE- 244
G G G SL+I GI+ G + + L Q + +LG +GV I + VV E
Sbjct: 177 GIGNGISLLIFAGIVAGLPGAIGQTLEQARNGEMSLL-VVLG-IGVLAIAVVGFVVFMER 234
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
G R++ + Y A + + ++P +N +G+ P + + +L FP+ L
Sbjct: 235 GQRRLTINY-----AKRQQGRRVFAQQSSHLPLKVNMAGVIPPIFASSILLFPASLGQWF 289
Query: 305 GS----PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNK 358
G + + + L P ++P +Y ++A V F F A + PKE+AD L +
Sbjct: 290 GQGEGMEWLSDISQALAP-----SQP-LYIILFAAAVIFFCYFYTALMYNPKEVADNLKR 343
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
GA IP ++PG+ T +Y+ + +G + +A S + N F +G TS
Sbjct: 344 SGAFIPGIRPGEQTAKYIDGVLTRLTLFGAMY---IAAVSLFPQFLMVAGNVPFYLGGTS 400
Query: 419 VLIIVGSIIELRRSYQAY 436
+LI+V +++ Q++
Sbjct: 401 LLIVVVVVMDFMAQVQSH 418
>gi|404492311|ref|YP_006716417.1| preprotein translocase subunit SecY [Pelobacter carbinolicus DSM
2380]
gi|77544418|gb|ABA87980.1| preprotein translocase, SecY subunit [Pelobacter carbinolicus DSM
2380]
Length = 435
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 201/418 (48%), Gaps = 23/418 (5%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
E+R R+ T ++ + R+G +P+PG + ++ + + + + F GA +++
Sbjct: 13 ELRHRILFTLGMLAVYRVGCHVPIPGINADVLAEFFQKTEGTLLGMVSAFTGGALARMTV 72
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE----AV 140
F LGI P I ASI++Q+L + + +L KEG G + I + + ++ +I++ AV
Sbjct: 73 FALGIMPYISASIILQLLGVVFEPVERLSKEGEQGRKTITKWTRYGTIVLSIVQGTGIAV 132
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ ++ + +S + +++T L G + W+ + I+E G G G SLII GI+
Sbjct: 133 GLQSMTIGQAPVVSSPGIGFILLTVLTLTSGTAFIMWVGEQITERGIGNGISLIIFAGII 192
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
++ L L ++ P L + V I T+WA+V E ++ +Y ++
Sbjct: 193 ADMPSAVFNTLR--LANTGALSPAKLLFVLVVVIATVWAIVFMELAQRRLPIHYAKRVVG 250
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
++P IN SG+ P + + ++ FP+ +A+++ P+ Q + P
Sbjct: 251 MRNYGGQ----NSHLPLKINMSGVIPPIFASSIIMFPATVANLIDIPWVQKAAGWMAPGN 306
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTK 378
VYY Y F+ F F A P ++AD + K G IP ++PGKAT +Y+
Sbjct: 307 ------LVYYIFYVAFIIFFCYFYTAVTFNPVDVADNVKKQGGYIPGIRPGKATSDYIDS 360
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ F G +S++ T+L + +N F G TS+LI+VG ++ +A+
Sbjct: 361 VLGRLTFAGAAYVSLVCVLPTLL---VSGLNVPFFFGGTSLLIVVGVGLDTASQVEAH 415
>gi|411002559|ref|ZP_11378888.1| preprotein translocase subunit SecY [Streptomyces globisporus
C-1027]
Length = 437
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 201/436 (46%), Gaps = 36/436 (8%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
A +F ++R++L T +IVI R+G IP PG D + Q SG + L
Sbjct: 6 ARAFKTPDLRKKLLFTLGMIVIYRLGAHIPAPGVDYTKVQQCIDQADSGGLLGLMQMFSG 65
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ A+
Sbjct: 66 GALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALAV 125
Query: 137 LEAVIVACYSLPYSIY---------AASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
L+ + + +++ A SV ++ + G + W+ + I++ G
Sbjct: 126 LQGTGLVATARSGALFQNCSVGDQIVADKSVFTTVIMVVTMTAGTAAVMWLGELITDRGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKML-SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G S+++ + I + L+ + S L W F +L F +V + V V +
Sbjct: 186 GNGMSILMFISIAATFPGALWSIKESGKLADG--WIEFATVILIGFVMVGL-VVFVEQAQ 242
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R++ +QY + + + YIP +N +G+ PV+ + LL P+++ GS
Sbjct: 243 RRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIVQFSGS 297
Query: 307 ----PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKM 359
W + E +Y Y + F F +A N P E+AD + K
Sbjct: 298 NAGWATWITDNFVQQNEP-------IYMVAYFLLIVFFAFFYVAISFN-PDEVADNMKKY 349
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G IP ++ G+ T EYL+ + + G L L+++A T+ N F G TS+
Sbjct: 350 GGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLALIALVPTMALAGFGGANANFPFGGTSI 409
Query: 420 LIIVGSIIELRRSYQA 435
LIIVG +E + ++
Sbjct: 410 LIIVGVGLETVKQIES 425
>gi|374852136|dbj|BAL55076.1| preprotein translocase subunit SecY [uncultured Bacteroidetes
bacterium]
Length = 453
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 215/443 (48%), Gaps = 29/443 (6%)
Query: 12 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 71
+++V+ F E+R+R+ TA+++V+ RIG I +PG D + + ++
Sbjct: 1 MATVIETVRNIFRIEELRQRIVFTALMLVVVRIGAHITIPGIDIEALKASTATSDPNNLF 60
Query: 72 ELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
L D GA + F +GI P I ASI++Q+ VP L++L++EG +G KI +
Sbjct: 61 GLYDLFVGGAFSNAAIFAMGIMPYISASIILQLAGVFVPELMKLQREGEEGRRKINQWTR 120
Query: 129 WISLGFAILEAVIVACYSLPYSIYAASHSVK------HVMVTAFLLVCGAMTMSWICDTI 182
++++ A ++A+ ++ + S+ + ++ G + + WI + I
Sbjct: 121 YLTVFVAAMQALGLSIKLTATTAGIGGQSIVVAPGILFTLTAVAVMTAGTIFLMWIGEQI 180
Query: 183 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 242
+E G G G SLII +GI++ + L QL+ + R W L L+ ++ V+V
Sbjct: 181 TERGIGNGISLIIFIGIISRLPVAIQNEL-QLIAAGARNWVVDLILVAFLGVIVALVVLV 239
Query: 243 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
T+G R++ +QY K ++ T YIP +N +G+ P++ + +L P+ + S
Sbjct: 240 TQGARRIPIQYA--KRIEGRKQYGGHTT---YIPLRVNTAGVMPIIFASAILFIPNTILS 294
Query: 303 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMG 360
F+ + ++N R VY IYA + F F IA P+++AD L +
Sbjct: 295 -----FFPENQTLINIAHLFSDRSVVYAVIYAALIIFFTYFYTAIAFNPRQVADDLKRAQ 349
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS----IGF 416
IP V+PG T EYL I G + L+I+A + + L N +S G
Sbjct: 350 GFIPGVRPGNPTAEYLDTILTRITLPGAVFLAIIALLPVFVTNVL---NVPYSFAQFFGG 406
Query: 417 TSVLIIVGSIIELRRSYQAYNVM 439
TS+LIIVG ++ + +AY +M
Sbjct: 407 TSLLIIVGVALDTLQQIEAYLLM 429
>gi|308178113|ref|YP_003917519.1| protein-export membrane protein SecY [Arthrobacter arilaitensis
Re117]
gi|307745576|emb|CBT76548.1| protein-export membrane protein SecY [Arthrobacter arilaitensis
Re117]
Length = 434
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 201/435 (46%), Gaps = 37/435 (8%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-LSFVSG---SVDELGD 75
A F ++R +L T +I I R+G FIP PG D + Q + +G S L
Sbjct: 6 ARVFRTPDLRNKLLFTLGIIAIYRVGVFIPAPGIDYSNVQQCLAMGETTGGLYSFVNLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L++S F +GI P I A+I++Q+L ++P L KEG G K+ Y ++++ A
Sbjct: 66 GGALLQVSVFAMGIMPYITAAIIVQLLRVVIPHFETLHKEGQAGQAKLTQYTRYLTIALA 125
Query: 136 ILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+L+ + + S++ + S+ +M+ L G + W+ + I+E G G
Sbjct: 126 LLQGTTLVTLARTGSLFPSCTLSLVPDDSLIVIMLMIITLTAGTGLIMWMGELITERGIG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
G S++I + I +G+ ++ + Q G ++GLL + V V + R+
Sbjct: 186 NGMSILIFISIASGFPSSMGAIF-QAQGVMTFIGVLLVGLL-----IVALVVFVEQSQRR 239
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
V +QY A + YIP +N + + PV+ + +LA P ++ F
Sbjct: 240 VPVQY-----AKRTVGRRTVGGTSTYIPLKLNMANVIPVIFASSILALPQMIVQ-----F 289
Query: 309 WQHVKEILN------PETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMG 360
Q+ L E S + PW Y +Y + F F +A P+E+AD + K G
Sbjct: 290 NQNDDGTLPQWAMWLQEHSATSSPW-YMLVYTLLIIGFTYFYVAITFNPEEVADNMKKYG 348
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
IP ++ G+ T +YL + + F G L L+ +A ++ L ++ F G TS+L
Sbjct: 349 GFIPGIRAGRPTADYLQYVISRITFPGALYLAFVALIP-LIAFVLFNADQSFPFGGTSIL 407
Query: 421 IIVGSIIELRRSYQA 435
I+VG +E + A
Sbjct: 408 IMVGVGLETVKQINA 422
>gi|212637974|ref|YP_002314494.1| preprotein translocase subunit SecY [Anoxybacillus flavithermus
WK1]
gi|212559454|gb|ACJ32509.1| Preprotein translocase subunit SecY [Anoxybacillus flavithermus
WK1]
Length = 430
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 203/421 (48%), Gaps = 25/421 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP-QDYLSFVSGSVDELGDFGAELKLSF 84
+IRR++ T +++++ RIG FIP+PG + ++ QD + G ++ G GA S
Sbjct: 12 GDIRRKILFTLLMLIVFRIGTFIPVPGVNADVLKMQDQFN-AFGVLNTFGG-GALKNFSI 69
Query: 85 FQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILEAVI 141
F +G+ P I ASI++Q+L +VP + K+G G K+ + + I LGF A+
Sbjct: 70 FAMGVMPYITASIIVQLLQMDVVPKFTEWSKQGEVGRRKLAQFTRYFTIVLGFIQAFAMS 129
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
+++ + + + ++ A +L G + W+ + I+ G G G S++I GI++
Sbjct: 130 YGFHNMSGGVLIKNPGIPTYLLIALVLTAGTAFLMWLGEQITAKGVGNGISVLIFAGIVS 189
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA----VVVTEGCRKVKLQYYGFK 257
G TL ++ Q ++ + + + + + + + + RK+ +QY
Sbjct: 190 GIPTTLNQIYVQQFENAGDQLFLRIVTVLLVALAVVAVIVGVIYMQQAFRKIPIQY---- 245
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---PFWQHVKE 314
A SP+ +IP +NP+G+ PV+ + P +AS GS W +K+
Sbjct: 246 -AKRLEGRSPVGGHSTHIPLKVNPAGVIPVIFAVSFIITPPTIASFFGSNDVTLW--IKK 302
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
+ + VG +Y + F + + + P+++AD L K G IP ++PGK T E
Sbjct: 303 VFDYTQPVGM--IIYVALIVAFTYFYAFVQVN--PEQMADNLKKQGGYIPGIRPGKNTQE 358
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
++T++ F G L L+ +A + ++ IG TS+LI+VG +E + +
Sbjct: 359 FITRVLYRLTFVGALFLAAIAVLPVFFIEF-AKLPPSAQIGGTSLLIVVGVALETMKQLE 417
Query: 435 A 435
+
Sbjct: 418 S 418
>gi|116493143|ref|YP_804878.1| preprotein translocase subunit SecY [Pediococcus pentosaceus ATCC
25745]
gi|421894174|ref|ZP_16324665.1| preprotein translocase, SecY subunit [Pediococcus pentosaceus IE-3]
gi|116103293|gb|ABJ68436.1| protein translocase subunit secY/sec61 alpha [Pediococcus
pentosaceus ATCC 25745]
gi|385273002|emb|CCG90037.1| preprotein translocase, SecY subunit [Pediococcus pentosaceus IE-3]
Length = 432
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 206/422 (48%), Gaps = 28/422 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 86
+IR ++ T ++++ R+G +I +PG + + + S + G ++ G S F
Sbjct: 13 DIRNKILFTLGILIVFRLGSYITVPGVNAKALESMSSSGLVGILNTFSG-GGLTNYSIFA 71
Query: 87 LGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV-IVAC 144
+G+SP I A I++Q+L IVP V+ K+G G K+ W+++ A +++ I A
Sbjct: 72 MGVSPYITAQIIVQLLQMDIVPKFVEWSKQGEVGRRKLNQATRWLTIVLAFAQSIGITAG 131
Query: 145 YS-LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
++ L S SV+ + +L G M +W+ D I+E G GQG S+II GI+
Sbjct: 132 FNYLSQMNLVESPSVQTFLTIGLILTAGTMLTTWLGDMITERGIGQGVSMIIFAGIIART 191
Query: 204 TETLYKMLS-QLLGSSVRWWPFMLGLLGVFTIVTMWAVV----VTEGCRKVKLQYYGFKL 258
+ ++ + Q + ++ W ++G + + V+ V + RK+ +QY +
Sbjct: 192 PVGIQQIYTEQFVNTAKSEWTQSFIIVGAIILAVLAIVIFVTWVQQASRKIPIQYT--RR 249
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL----ASILGSPFWQHV-K 313
AS A + S Y+P +N +G+ PV+ + ++ P + AS W V
Sbjct: 250 ASGASDSS-------YLPLKVNVAGVIPVIFASSFISTPQTILMAFASSHSDDTWYTVLN 302
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATI 373
++ N +T+ GA + YT+ F F N P+++A+ L K G+ IP V PGK T
Sbjct: 303 DVFNMQTTKGA---ILYTVLIVLFTFFYAFVQVN-PEKLAENLQKQGSYIPGVWPGKKTQ 358
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
+Y++ + G L L ++A +L + ++E +G TS+LI+VG IEL
Sbjct: 359 DYMSGLLIRLSVVGALFLGLVALIP-LLASNIFGLDESIGLGGTSLLIVVGVAIELANQL 417
Query: 434 QA 435
+
Sbjct: 418 EG 419
>gi|91200686|emb|CAJ73737.1| strongly similar to preprotein translocase SecY subunit [Candidatus
Kuenenia stuttgartiensis]
Length = 460
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 210/452 (46%), Gaps = 47/452 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 80
E+R+++ +T LI + R+G ++P+PG D ++ + F + +L GA
Sbjct: 13 ELRKKVLITLGLIALCRVGVYLPIPGIDTTVLKSYFNQFSQSGIGQLLGMVDMFAGGAMS 72
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+ F LG+ P I ASI+ Q+L +VP L +L+KEG G +KI Y ++G + +A
Sbjct: 73 SGAIFGLGVMPYISASIIFQLLVGVVPYLERLQKEGEVGRKKINQYTRIATVGLCLFQAF 132
Query: 141 IV--ACYSLPYS----IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
++ Y++ ++ I V ++ A LL G M + WI + I E G G G S++
Sbjct: 133 VMTRTLYTVEFNGVPVIPVYLQGVSFQLMAAILLTTGTMILMWIGEQIEEHGIGSGISIV 192
Query: 195 ICVGILTGYTETL---YKMLSQLLGSSVRWWPFMLG------LLGVFTIVTMWAVVVTEG 245
I VGI+ E L + + Q SV +G LLG+F + V +T+G
Sbjct: 193 IMVGII----ERLPWAFNQIVQNFTFSVAPAEHQIGIVKLLILLGMFFAIVGGVVYITQG 248
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL- 304
R++ +Q A R ++P +N +G+ P++ LL FP+ + +
Sbjct: 249 QRRIPIQQ-----AKHTRGRRVYGGQRHFLPLRVNQAGVMPIIFAQSLLIFPAAIMQGIQ 303
Query: 305 -----GS-PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYL 356
GS +W I + + + +Y +Y + F F I P+E+++ +
Sbjct: 304 IRFEPGSVGYW-----ITSRLSGILQEGVLYVMLYILLITFFCYFWTAIQFNPREMSNNM 358
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTIL--DHYLRRINEGFSI 414
G+ IP ++PG T EYL I G LS++A ++ L R GF
Sbjct: 359 KDYGSFIPGIRPGHRTAEYLESIMGKITLAGAAFLSLIAILPKLVAGGFELNRAIAGFY- 417
Query: 415 GFTSVLIIVGSIIELRRSYQAYNVMPSLSKAL 446
G T +LIIVG +++ + +++ +M S L
Sbjct: 418 GGTGLLIIVGVALDMVQRIESHMIMRQYSGFL 449
>gi|386841899|ref|YP_006246957.1| preprotein translocase subunit SecY [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|374102200|gb|AEY91084.1| preprotein translocase subunit SecY [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|451795193|gb|AGF65242.1| preprotein translocase subunit SecY [Streptomyces hygroscopicus
subsp. jinggangensis TL01]
Length = 437
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 213/439 (48%), Gaps = 32/439 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T +IV+ R+G IP+PG + + + Q ++ G+ G
Sbjct: 1 MLTAFARAFRTPDLRKKLLFTLGIIVVYRVGTHIPIPGVNYKAV-QTCVNEAQGNQGLFG 59
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 130 ISLGFAILEA---VIVACYSLPYSIYAASHSV---KHVMVTAFLLVC---GAMTMSWICD 180
+++ AIL+ V A +S + + S+ + + T +++C G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGALFSGCSVATSIVPDQAIFTTITMVICMTAGTAVVMWLGE 179
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
+++ G G G S+++ + I + L+ + Q G+ W ++ V ++ V
Sbjct: 180 LVTDRGIGNGMSILMFISIAATFPSALWAIKKQ--GTLAGGWIEFGTVIAVGLVMVALVV 237
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALV 292
Query: 301 ASILGSPF-WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYL 356
A G W K + + G P +Y Y + F F +A N P+E+AD +
Sbjct: 293 AQFAGGKSGW---KTWVEQNLTKGDHP-IYIVSYFLLIVFFAFFYVAISFN-PEEVADNM 347
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++ G+ T EYL+ + + G L L ++A T+ ++ F G
Sbjct: 348 KKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALVGFGA-SQNFPFGG 406
Query: 417 TSVLIIVGSIIELRRSYQA 435
TS+LIIVG +E + ++
Sbjct: 407 TSILIIVGVGLETVKQIES 425
>gi|29831489|ref|NP_826123.1| preprotein translocase subunit SecY [Streptomyces avermitilis
MA-4680]
gi|29608604|dbj|BAC72658.1| putative preprotein translocase SecY subunit [Streptomyces
avermitilis MA-4680]
Length = 438
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 208/438 (47%), Gaps = 29/438 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T +IV+ R+G IP+PG D + + S G+ G
Sbjct: 1 MLTAFARAFRTPDLRKKLLFTLAIIVVYRLGTHIPIPGVDYKNVQTCIDSASKGNQGLFG 60
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 61 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 120
Query: 130 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVM------VTAFLLVC---GAMTMSWICD 180
+++ AIL+ + + +++ ++ T +++C G + W+ +
Sbjct: 121 LTVALAILQGTGLVATARSGALFGTCPVGNQIVPDQGIFTTITMVICMTAGTAVVMWLGE 180
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I++ G G G S+++ + I + L+ + Q GS W ++ V ++ V
Sbjct: 181 LITDRGIGNGMSILMFISIAASFPSALWAIKQQ--GSLADGWIEFGTVIAVGLVMVGLVV 238
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 239 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 293
Query: 301 ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLN 357
A S K + + G P +Y T Y + F F +A N P+E+AD +
Sbjct: 294 AQF--SKDTSGWKSWIEQNLTKGDHP-IYITAYFLLIVFFAFFYVAISFN-PEEVADNMK 349
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++ G+ T EYL+ + + G L L ++A T+ ++ F G T
Sbjct: 350 KYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALVGFGA-SQNFPFGGT 408
Query: 418 SVLIIVGSIIELRRSYQA 435
S+LIIVG +E + ++
Sbjct: 409 SILIIVGVGLETVKQIES 426
>gi|407005292|gb|EKE21453.1| hypothetical protein ACD_7C00238G0005 [uncultured bacterium]
Length = 423
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 203/425 (47%), Gaps = 18/425 (4%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF-VSGSVDELGDFGA 78
A F E+R ++ L+V+ R+ IPLPG D + + + + G ++ G
Sbjct: 6 ARIFKIKELRGKILFIIALLVVFRLAANIPLPGVDLSQLKSFFENNQLFGMINAFSG-GG 64
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAIL 137
+S LG+ P I +SI+MQ+L I P L +L+KE G G +K + WI++ A++
Sbjct: 65 MSNISIVLLGVGPYITSSIIMQLLTMIFPKLEKLQKEEGEAGRQKFNMWTRWITVPLAVV 124
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFLL-VCGAMTMSWICDTISESGFGQGSSLIIC 196
+ A +L S S MV ++ G + + W+ + I+E G G G S+II
Sbjct: 125 QTF--AMINLLKSQNVISDLSTFEMVNILVVATAGTIFLMWLGELITEKGIGNGVSIIIF 182
Query: 197 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
GI+ G ++ K ++ S+ + + L+G+ TI + V+V EG R + + Y
Sbjct: 183 AGIVAGLPGSISK-IAATFDSTDLFGYILFVLVGLITIAGV--VMVNEGQRNIPISY--- 236
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
A R + ++P +N +G+ P++ ++ FP ++A+ + + V ++
Sbjct: 237 --AKRIRGNKTFGGTSTHLPLRVNQAGVIPIIFAISIMLFPGLIANFFVNSDKETVAQVA 294
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
+ + W Y + Y V LF F A + P +I++ L K G +P V+PG AT E
Sbjct: 295 RFVSQLFQNQWFYGSAYFIMVVLFTYFYTAVVFDPNKISENLQKQGGYVPGVRPGNATAE 354
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
+L++I G + L +A I+ + ++G TS+LI V +IE+ + +
Sbjct: 355 FLSRIINRITLSGSIFLGAIAVLPLIIQGFTGI--SALTVGGTSILIAVSVVIEMVKQIE 412
Query: 435 AYNVM 439
VM
Sbjct: 413 GQMVM 417
>gi|421526088|ref|ZP_15972697.1| preprotein translocase subunit SecY [Fusobacterium nucleatum ChDC
F128]
gi|402257847|gb|EJU08320.1| preprotein translocase subunit SecY [Fusobacterium nucleatum ChDC
F128]
Length = 426
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 211/423 (49%), Gaps = 32/423 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 81
E+R R+ T ++ +++R+G IP PG D D LS ++ D L GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVD-----VDRLSSMASQSDVLSYINMFSGGAFTR 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ AI++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAIIQGAG 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLIYNPGLSFFVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 260
++ + + + G+ ++ +L L+ VT+ +V+ + G RK+ + Y G S
Sbjct: 193 RAPSSVIQTIQTMQGN--KFLIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFTS 250
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
I E + YIP +N +G+ PV+ + + P ++ + L P +K L+
Sbjct: 251 KGG----IGE-KSYIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PSTLSIKTTLS--I 301
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTK 378
G VY +YA + F+ F A + P+++A+ L + G IP ++PG+ T+EYL
Sbjct: 302 IFGQNHPVYMIMYALVIMFFSFFYTALVFDPEKVAENLRQGGGTIPGIRPGEETVEYLEG 361
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQAY 436
+ + + GG L+I++ + Y+ + G + G T ++I+VG ++ + A+
Sbjct: 362 VASRITWGGGFFLAIIS-----ILPYVIFTSMGLPVYFGGTGIIIVVGVALDTIQQIDAH 416
Query: 437 NVM 439
VM
Sbjct: 417 LVM 419
>gi|315037550|ref|YP_004031118.1| preprotein translocase subunit SecY [Lactobacillus amylovorus GRL
1112]
gi|325956023|ref|YP_004286633.1| preprotein translocase subunit SecY [Lactobacillus acidophilus
30SC]
gi|385816908|ref|YP_005853298.1| preprotein translocase subunit SecY [Lactobacillus amylovorus
GRL1118]
gi|312275683|gb|ADQ58323.1| preprotein translocase subunit SecY [Lactobacillus amylovorus GRL
1112]
gi|325332588|gb|ADZ06496.1| preprotein translocase subunit SecY [Lactobacillus acidophilus
30SC]
gi|327182846|gb|AEA31293.1| preprotein translocase subunit SecY [Lactobacillus amylovorus
GRL1118]
Length = 431
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 214/430 (49%), Gaps = 27/430 (6%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
S L NA F EIR +++ T +++I RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIYFTLFILLIYRIGANITVPGVNAKAITQVAQTGLVPMLDTV 59
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLAL 118
Query: 133 GFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFVQSIGITLGFNALTQMGLVKNQTPQTYVEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 245
S+II GI+ L+++ + + SS RW F + ++ +VT V +
Sbjct: 179 VSVIIFAGIIARLPSGLWQIYKESIINNSSSDRWKGILFFIAVIVAILVVTQLVTWVEQA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVL-TTTYLLAFPSILASIL 304
R++ +QY + I+ E ++P +N SG+ PV+ +++++ +IL +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIITPATILMAFQ 289
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGAR 362
+ Q +++N S+ P V IY + LF F + P+++A+ L K GA
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGVI--IYTLLIILFTFFYAFVQVNPEKLAENLQKQGAY 347
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP+V PGK T Y++K+ G + L ++A + ++ + +G TS+LI+
Sbjct: 348 IPSVWPGKDTQNYISKMLIKLSTVGSVFLGLVALLPQLATNFW-NLPSSIGLGGTSLLIV 406
Query: 423 VGSIIELRRS 432
+G ++EL R
Sbjct: 407 IGVVLELSRQ 416
>gi|313893111|ref|ZP_07826688.1| preprotein translocase, SecY subunit [Veillonella sp. oral taxon
158 str. F0412]
gi|313442464|gb|EFR60879.1| preprotein translocase, SecY subunit [Veillonella sp. oral taxon
158 str. F0412]
Length = 420
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 210/432 (48%), Gaps = 35/432 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L++ + F +E+R ++ T ++ + R G IP+PG D +I F SG++ L
Sbjct: 1 MLDSLSNIFKITELRNKILYTLMMFAVFRAGIHIPVPGVDASVIES---LFTSGNLFGLL 57
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
D GA K S F + I+P I ASI+MQ+L +VP K+G DG +KI + +
Sbjct: 58 DLFAGGALSKFSIFAMSITPYINASIIMQLLQSVVPQFEAWSKDGEDGRKKIAKVTRYGT 117
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+ ++A +A ++L + ++ V V A +L G + WI + I+ G G G
Sbjct: 118 VVLGFVQAAGMA-FALRANNALVNNDFLSVFVVAIILTAGTCLLMWIGEQITAYGIGNGI 176
Query: 192 SLIICVGI---LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
SLII GI L ET+Y+ + G+ + F+ ++ + I + V VT+G R+
Sbjct: 177 SLIIFAGIVARLPDGLETIYQYIQN--GTINMFQAFLFAVIALAMIAVV--VAVTQGQRR 232
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY A ++P +N +G+ P++ + +L FP +A + + F
Sbjct: 233 IPIQY-----AKRVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSVLMFPVTIAQFIDNEF 287
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKMGARIPN 365
V ++ T + +YA +F+F F A N+ ++AD + K G IP
Sbjct: 288 VHKVADLFTWGTPLQT------ALYALLIFIFTYFYTAISINI-TDMADNMKKYGGFIPG 340
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSVLIIV 423
++ GK T +Y+ + G + L+++A I+ ++L I +G G T++LI+V
Sbjct: 341 IRAGKPTADYVDNVMTRITLAGAVFLAVVA----IIPNFLGSITGVQGVYFGGTALLIVV 396
Query: 424 GSIIELRRSYQA 435
G ++ + ++
Sbjct: 397 GVALDTMQQIES 408
>gi|260495183|ref|ZP_05815311.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_33]
gi|289765432|ref|ZP_06524810.1| protein translocase subunit secY [Fusobacterium sp. D11]
gi|336400140|ref|ZP_08580928.1| preprotein translocase, SecY subunit [Fusobacterium sp. 21_1A]
gi|336419067|ref|ZP_08599334.1| preprotein translocase, SecY subunit [Fusobacterium sp. 11_3_2]
gi|423138117|ref|ZP_17125760.1| preprotein translocase, SecY subunit [Fusobacterium nucleatum
subsp. animalis F0419]
gi|260197240|gb|EEW94759.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_33]
gi|289716987|gb|EFD80999.1| protein translocase subunit secY [Fusobacterium sp. D11]
gi|336163337|gb|EGN66269.1| preprotein translocase, SecY subunit [Fusobacterium sp. 21_1A]
gi|336164072|gb|EGN66984.1| preprotein translocase, SecY subunit [Fusobacterium sp. 11_3_2]
gi|371958679|gb|EHO76388.1| preprotein translocase, SecY subunit [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 426
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 213/423 (50%), Gaps = 32/423 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG-----DFGAELK 81
E+R R+ T ++ +++R+G IP PG D D LS ++ D L GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVD-----VDRLSSMASQSDVLSYINMFSGGAFTR 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ A+++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGEAGRNRITQWTRYLTIALAVIQGTG 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLIYNPGISFFVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVIS 192
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 260
++ + + + G+ ++ +L L+ VT+ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTIQTMQGN--KFLIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
I E + +IP +N +G+ PV+ + + P ++ + L P +K L+
Sbjct: 251 KGG----IGE-KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNAL--PSTLSIKTTLS--I 301
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTK 378
G VY +YA + F+ F A + P+++A+ L + G IP ++PG+ T+EYL
Sbjct: 302 IFGQNHPVYMILYALVIMFFSFFYTALIFDPEKVAENLKQGGGTIPGIRPGEETVEYLEG 361
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQAY 436
+ + + GG+ L+I++ + Y+ + G + G T ++I+VG ++ + A+
Sbjct: 362 VASRITWGGGIFLAIIS-----ILPYVIFTSMGLPVYFGGTGIIIVVGVALDTIQQIDAH 416
Query: 437 NVM 439
VM
Sbjct: 417 LVM 419
>gi|255659523|ref|ZP_05404932.1| preprotein translocase, SecY subunit [Mitsuokella multacida DSM
20544]
gi|260848075|gb|EEX68082.1| preprotein translocase, SecY subunit [Mitsuokella multacida DSM
20544]
Length = 418
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 210/427 (49%), Gaps = 24/427 (5%)
Query: 18 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
+A + FK E+R+++ T ++ I R+G IP+PG D I + F +G++ L D
Sbjct: 3 SALGNIFKIPELRQKIIFTLIMFAIFRMGTHIPVPGVDPTAIEK---LFANGNLFGLLDL 59
Query: 77 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
GA K S F + I+P I A+I++Q+L ++P+L Q KEG +GH+K ++++
Sbjct: 60 FSGGAFSKFSIFAMSITPYINAAIIIQLLNVVIPTLEQWSKEGEEGHKKTTQVTRYLTVV 119
Query: 134 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
A L+A+ S+ + + ++++ A L G + + W+ + I+ G G G SL
Sbjct: 120 LAFLQAI---GMSIGLKAAILNPNPVNILIIAITLTAGTVFLMWVGEQITAQGVGNGISL 176
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
II GI+ + L + + ++ ++ FM G++ + +V + + V G R++ +
Sbjct: 177 IIFAGIVAALPKNLGTIYHYVQAGTISYFSVFMFGVIALAMVV--FVIHVETGFRRIPIS 234
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
Y + A +IP +N +G+ P++ + +L FP +A + P+ + V
Sbjct: 235 YAKRVVGQRAYGGH-----SSHIPLKVNQAGVIPIIFASSVLMFPVTVAQFIDVPWVKTV 289
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
L E + +Y + FF + + + +P ++AD L K G IP ++PGK T
Sbjct: 290 ASYL--EWGKPLQTALYVGLIIFFTYFYTAVTV-KIP-DMADNLKKYGGFIPGIRPGKPT 345
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+YL + G + L+ +A ++ EG G T++LI+VG ++ +
Sbjct: 346 ADYLDHVLTRITLAGSVFLAFIAVLPNMIAAATHI--EGVYFGGTALLIVVGVALQTMKQ 403
Query: 433 YQAYNVM 439
++ VM
Sbjct: 404 IESMVVM 410
>gi|357589453|ref|ZP_09128119.1| preprotein translocase subunit SecY [Corynebacterium nuruki S6-4]
Length = 444
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 191/398 (47%), Gaps = 41/398 (10%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG------SVDELGD 75
+F +++R+++ T +I++ RIG IP PG D I + S S+ +
Sbjct: 7 AFRDADLRKKILFTIAMIILFRIGSQIPTPGVDYEEITEQVRSLTEDGQTSMYSLINMFS 66
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y ++++ A
Sbjct: 67 GGALLQLSIFAIGIMPYITASIIVQLLTVVIPRFEQLKKEGQSGQAKMTEYTRYLTVALA 126
Query: 136 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLV-------CGAMTMSWICDTISESGFG 188
+L++ + + + + V H F LV GA+ + W+ + I++ G G
Sbjct: 127 LLQSAGIVALADRKQLLGSGVRVLHEDTGVFGLVMMVVIMTAGAVLVMWMGELITDRGVG 186
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFML-GLLGVFTIVTMWAVVVTEGCR 247
G SL+I GI T ++ SQ + F+ G++ I+ + + + +G R
Sbjct: 187 NGMSLLIFAGIAT-------QLPSQGMNILRNSGGFVFAGVIVALLILVVGVIFIEQGQR 239
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 306
+V +QY K R+ E Y+P +N +G+ PV+ + +L P ++ I+ S
Sbjct: 240 RVPVQYA--KRMVGRRQYG---ETSTYLPLKVNQAGVIPVIFASSMLTVPILVTQIIQSG 294
Query: 307 ------PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLN 357
+W ++V IL + W+Y I+A + F+ F + P + A+ +
Sbjct: 295 DSAQNDNWWNRNVMRILTDPSD-----WIYIVIFALLIIFFSFFYVSVQYDPYDQAENMK 349
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILA 395
K G IP ++PG+ T EYL + G + L+++A
Sbjct: 350 KYGGFIPGIRPGRPTAEYLGYVMNRLLIVGSVYLAVIA 387
>gi|302388731|ref|YP_003824552.1| protein translocase subunit secY/sec61 alpha [Thermosediminibacter
oceani DSM 16646]
gi|302199359|gb|ADL06929.1| protein translocase subunit secY/sec61 alpha [Thermosediminibacter
oceani DSM 16646]
Length = 418
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 206/426 (48%), Gaps = 41/426 (9%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGDFGAELKL 82
++RRRL T +++V+ RIG F+P+PG + R+LI + L G D + GA +
Sbjct: 13 DLRRRLQFTLLMLVVFRIGAFVPVPGMNPEAVRQLIERGALL---GFFDIIAG-GAFKQF 68
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F + I+P I ASI++Q+L ++P +L KEG++G + + Y + G IL +
Sbjct: 69 SVFAMSITPYINASIIVQLLTIVIPRWEELAKEGVEGRKVLARYTRY---GTVILGLIQA 125
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
++ + + ++ L G + W+ + I++ G G G SL+I GI++
Sbjct: 126 TGLAVGFRSALTNPGFFGSLLVVLSLTAGTAFLMWVGEQITDKGIGNGISLLIFAGIVSR 185
Query: 203 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFKLASA 261
+Y+M + + M+ L VF +V + V+ V + R++ +QY +
Sbjct: 186 LPSGVYQMYDYIRVGTANV--LMVLLFAVFALVVIVGVIAVQQAERRIPVQYA--RRVVG 241
Query: 262 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETS 321
R T +IP +N +G+ PV+ +L FPS +A F+ + K ++
Sbjct: 242 RRVYGGQTT---HIPMKLNAAGVIPVIFAMSILLFPSTIAG-----FFPNSKVAVSIANF 293
Query: 322 VGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKI 379
+ W+Y ++YA + F F A P ++AD + K G IP ++PG++T EYL KI
Sbjct: 294 IEPGGWLYASLYALLIIFFTYFYTAVTFNPVDVADNMKKYGGFIPGIRPGRSTAEYLNKI 353
Query: 380 QASTRFWGGLLLSILA------TSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
G + L+ +A T T L+ Y G T++LI++G +E +
Sbjct: 354 MTRITLIGAIFLAAIAVLPYLITGVTSLNIYF---------GGTALLIVIGVALETMKLI 404
Query: 434 QAYNVM 439
+A +M
Sbjct: 405 EAQMLM 410
>gi|78189787|ref|YP_380125.1| preprotein translocase subunit SecY [Chlorobium chlorochromatii
CaD3]
gi|78171986|gb|ABB29082.1| protein translocase subunit secY/sec61 alpha [Chlorobium
chlorochromatii CaD3]
Length = 443
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 204/431 (47%), Gaps = 38/431 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
E+R+R+ T +L+ I RIG I +PG D + S + D G F GA +
Sbjct: 15 ELRQRILYTLLLLFIYRIGSHITIPGVDALAVSTASQSHAN---DLFGLFDLFVGGAFAR 71
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-- 139
S F LGI P I ASI++Q+L + P +L+KEG DG +KI ++ AIL+A
Sbjct: 72 ASIFSLGIMPYISASIIVQLLGAVTPYFQKLQKEGEDGRQKINQLTRMGTVLIAILQAWG 131
Query: 140 --VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
V +A + + ++ T +L M + W+ + I+E G G G SLII +
Sbjct: 132 VSVSLASPASFGKVIVPDPGFLFIVTTILILTASTMFVMWLGERITERGIGNGISLIIMI 191
Query: 198 GILTGYTETLYKMLSQL-LGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY--- 253
GIL + + + + LGS + W + +L + + + +T G R++ +Q+
Sbjct: 192 GILARFPQAVVAEFQSVSLGS--KNWIIEIIILALMGAIVASVIFLTVGTRRIPVQHAKR 249
Query: 254 -YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
G K+ + YIP IN +G+ P++ ++ P+ S F+
Sbjct: 250 VVGRKVYGGNTQ---------YIPMRINTAGVMPIIFAQSIMFLPATFLS-----FFPEN 295
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGK 370
+ + + + W Y I+ + F F +A PK++AD + + G IP V+PGK
Sbjct: 296 EMMQSIAGAFAYDSWWYALIFGAMIVFFTYFYTALAFNPKDVADTMRRQGGFIPGVRPGK 355
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--IGFTSVLIIVGSIIE 428
+T E++ I G + L+++A T L + + GF+ G TS+LIIVG ++
Sbjct: 356 STAEFIENILTRITLPGAISLALIAVLPTFLTKF-ANVTPGFAQFFGGTSLLIIVGVGLD 414
Query: 429 LRRSYQAYNVM 439
+ +++ +M
Sbjct: 415 TLQQVESHLLM 425
>gi|419846911|ref|ZP_14370114.1| preprotein translocase, SecY subunit [Bifidobacterium longum subsp.
longum 1-6B]
gi|386412455|gb|EIJ27122.1| preprotein translocase, SecY subunit [Bifidobacterium longum subsp.
longum 1-6B]
Length = 445
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 203/432 (46%), Gaps = 29/432 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE-------L 73
++ E+R+++ +I++ RIG FIP PG D + ++ + G+ E L
Sbjct: 6 QALKTKELRKKILFVLFIIIVYRIGSFIPTPGVDYTEV-NKCMAKIGGASQENFIGLVNL 64
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
GA L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G
Sbjct: 65 FSGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIG 124
Query: 134 FAILEAVIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
A+L++ + A ++ SV +++V ++ G + W+ + +++ G
Sbjct: 125 LAVLQSTTILVTARSGALFNYQCDQVIPDGSVFNLVVMVLIMTGGTGLIMWMAELVTDKG 184
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
GQG S++I + I +G+ L+++ G+ W F + + + I+ V E C
Sbjct: 185 IGQGMSILIFMSICSGFLPQLWEIGYGTNGTDGDWLKFGIVVGVLVVILIF--VDFVELC 242
Query: 247 -RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
R+V +QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 243 QRRVPVQYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FG 296
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARI 363
VK I N + W Y +YA + F F I P E AD + + G I
Sbjct: 297 KSDQSWVKWI-NANLANTTSVW-YIALYALMIVFFCFFYTSITFNPDETADNMKQYGGFI 354
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++ G AT YLT + G + L +A T+L L +N G T++LII
Sbjct: 355 PGIRAGNATSRYLTYVMNRLNTVGAVYLLFVALIPTVLIMAL-GLNAKLPFGGTTILIIA 413
Query: 424 GSIIELRRSYQA 435
G ++ R +A
Sbjct: 414 GVGLDTLRQAKA 425
>gi|373251926|ref|ZP_09540044.1| protein-export membrane protein SecY [Nesterenkonia sp. F]
Length = 435
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 198/425 (46%), Gaps = 38/425 (8%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-LSFVSGSVDELGDF-- 76
A F ++RR+++ T +I I RIG FIP PG D + Q L G V +
Sbjct: 6 ARVFQTPDLRRKIWFTIGIIAIYRIGAFIPAPGVDYGTVQQCLALGNTEGGVYSFVNMFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L++S F LGI P I A+I++Q+L ++P L++EG G K+ Y ++++
Sbjct: 66 GGAMLQVSIFALGIMPYITAAIIVQLLRVVIPRFENLQREGPQGQAKLTQYTRYLTIALG 125
Query: 136 ILEAVIVACYSLPYSIYAA------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
L A + + ++ S+ +++ LV G + W+ + I+E G G
Sbjct: 126 TLNATTIVTMARSGALLGCDLPIVPDDSLGVILLMILALVTGVALIMWLGEQITERGVGN 185
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRK 248
G S++I V I G+ + ++ S+ W F L LL +V + AVV V + R+
Sbjct: 186 GMSILIFVSIAAGFPGAMGEIW-----STQGWRIFALVLL--IGLVAIAAVVFVEQSQRR 238
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--- 305
V +QY ++ S YIP +N +G+ PV+ + +L PS++A
Sbjct: 239 VPVQYAKRQVGRRTLGGS-----STYIPIKVNMAGVIPVIFASSVLTLPSVIAQFNQPAP 293
Query: 306 ----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKM 359
P Q +++ S G P VY + F F I P E+A+ + K
Sbjct: 294 GEDVGPVMQFIQQYF----SGGTHP-VYMICFFLMTIFFTYFYVTITFNPNEVAENMRKF 348
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G IP+V+ G+ T YL+ + + F G L L +A I L +++ F G TS+
Sbjct: 349 GGFIPSVRAGRPTERYLSYVISRITFPGSLYLGFIALIPMI-AMVLLGVSQSFPFGGTSI 407
Query: 420 LIIVG 424
LI+VG
Sbjct: 408 LIMVG 412
>gi|358010441|ref|ZP_09142251.1| preprotein translocase subunit SecY [Acinetobacter sp. P8-3-8]
Length = 452
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 202/427 (47%), Gaps = 32/427 (7%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ I R +F+ L+V R+G IPLPG D + + F + LG F GA
Sbjct: 23 YREIIHRLMFLIGALVVF-RLGAHIPLPGIDNVALER---FFKANEGTFLGLFNMFSGGA 78
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y + +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRYGTLLLALVQ 138
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
I C L + + + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 G-IGMCAGLISQGITLTSGLAFYVPALTSLVAGTMFLMWLGEQITERGVGNGISMIIFAG 197
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGC-RKVKLQYYG 255
I+ G L ++ Q S ++GL G+ +I + A+V E R++ + Y
Sbjct: 198 IVAG----LPNLVIQAFTSVDNGQSSLIGLAVFGLLSIAVLAAIVFIEKAQRRIPVNY-- 251
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS--PFWQHVK 313
A + T + ++P IN +G+ P + + LL FP+ L LGS P VK
Sbjct: 252 ---AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGFVK 308
Query: 314 EILNPETSV--GARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 369
L V +P +Y ++ + F F A + PKE+A+ L + GA +P ++PG
Sbjct: 309 RALQDLALVLSPGQP-LYLVLFGALIIFFCYFYTALVFSPKEVAENLKRSGAYVPGIRPG 367
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
+ T YL I F G + ++++ IL F +G TS+LI+V +++
Sbjct: 368 EQTARYLDHILNRLTFIGAIYITVICLMPMILQ---SSFGIPFHLGGTSLLIVVVVVMDF 424
Query: 430 RRSYQAY 436
QA+
Sbjct: 425 MAQLQAH 431
>gi|300857799|ref|YP_003782782.1| preprotein translocase subunit [Corynebacterium pseudotuberculosis
FRC41]
gi|375287968|ref|YP_005122509.1| preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 3/99-5]
gi|379714672|ref|YP_005303009.1| preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 316]
gi|383313567|ref|YP_005374422.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis P54B96]
gi|384503987|ref|YP_005680657.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 1002]
gi|384506076|ref|YP_005682745.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis C231]
gi|384508166|ref|YP_005684834.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis I19]
gi|384510261|ref|YP_005689839.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis PAT10]
gi|385806835|ref|YP_005843232.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 267]
gi|387135933|ref|YP_005691913.1| preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 42/02-A]
gi|387137994|ref|YP_005693973.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|387140022|ref|YP_005696000.1| preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 1/06-A]
gi|389849740|ref|YP_006351975.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 258]
gi|392399942|ref|YP_006436542.1| preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis Cp162]
gi|300685253|gb|ADK28175.1| preprotein translocase subunit [Corynebacterium pseudotuberculosis
FRC41]
gi|302205536|gb|ADL09878.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis C231]
gi|302330091|gb|ADL20285.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 1002]
gi|308275772|gb|ADO25671.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis I19]
gi|341824200|gb|AEK91721.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis PAT10]
gi|348606378|gb|AEP69651.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 42/02-A]
gi|349734472|gb|AEQ05950.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|355391813|gb|AER68478.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 1/06-A]
gi|371575257|gb|AEX38860.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 3/99-5]
gi|377653378|gb|AFB71727.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 316]
gi|380869068|gb|AFF21542.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis P54B96]
gi|383804228|gb|AFH51307.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 267]
gi|388247046|gb|AFK16037.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 258]
gi|390531020|gb|AFM06749.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis Cp162]
Length = 440
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 200/427 (46%), Gaps = 40/427 (9%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-----ELGD 75
++F +++R+++ +T LIV+ RIG IP PG D I S S L
Sbjct: 6 QAFRDADLRKKILITLALIVLYRIGAQIPSPGVDYASISGRLRELTSDSSSVYSLINLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F +G+ P I ASI++Q+L ++P +L+KEG G K+ Y +++LG A
Sbjct: 66 GGALLQLSIFAIGVMPYITASIIVQLLTVVIPRFEELKKEGQSGQAKMDQYTRYLTLGLA 125
Query: 136 ILEAVIVACYSLPYSIYAASHSVKH-------VMVTAFLLVCGAMTMSWICDTISESGFG 188
+L++ + + + A V +++ ++ GAM + W+ + I+E G G
Sbjct: 126 LLQSSGIVALADRKQLLGAGVQVLMPNAGLWTLIMLVLVMSAGAMLVMWLGEIITERGVG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
G SL+I GI T +L+ G + I+ + V V +G R+
Sbjct: 186 NGMSLLIFAGIATRLPSDGANILNSSGGVVFAVVLVAV------IILVVGVVFVEQGQRR 239
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-- 306
+ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 240 IPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIINSGS 294
Query: 307 -----PFWQ-HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNK 358
+WQ +V + L +S W Y +Y + F+ F + P E A+ + K
Sbjct: 295 HEVSDNWWQRNVIQYLQTPSS-----WQYIVLYFVLIIFFSYFYVSVQYDPNEQAENMKK 349
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI-LDHYLRRINEGFS-IGF 416
G IP ++PG+ T EYL + F G L L I+A I LD + + G + G
Sbjct: 350 YGGFIPGIRPGRPTAEYLGFVMNRLLFVGALYLGIIAVLPNIALDLGVGASSAGSTPFGG 409
Query: 417 TSVLIIV 423
T++LI+V
Sbjct: 410 TAILIMV 416
>gi|153812884|ref|ZP_01965552.1| hypothetical protein RUMOBE_03291 [Ruminococcus obeum ATCC 29174]
gi|149831096|gb|EDM86185.1| preprotein translocase, SecY subunit [Ruminococcus obeum ATCC
29174]
Length = 438
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 212/431 (49%), Gaps = 28/431 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GA 78
+F E+RR+L +I + RIG +P+PG D + Q + S + + F G+
Sbjct: 7 SAFRVKEMRRKLLYLLAMIFVIRIGSQLPIPGVDGSVFKQWFKSNTGDAFNFFDAFTGGS 66
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
+S F L I+P I +SI++Q+L +P+L ++ ++G +G +K+ + ++++G A+ E
Sbjct: 67 FESMSVFALNITPYITSSIIIQLLTIAIPALEEMHRDGEEGRKKMTAITRYVTVGLALFE 126
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
++ + +I + +K V+V A L AM M WI + I+E G G G S+++ V
Sbjct: 127 SIAMTIGFSRGNIVKDMNFLKAVVVIASLTAGSAMLM-WIGERITEKGVGNGISIVLAVN 185
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGCRKVKLQYYGF 256
I++ + + + + G++ + +V ++ +++ R++ +QY
Sbjct: 186 IVSRIPSDMTTLYENFIKGKTIAKGMLAGVIIFAIIMVVVVFVLILNGAERRIPVQYSK- 244
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV-KEI 315
K+ T IP +N +G+ P++ + +++FP ++A G + EI
Sbjct: 245 KMVGRKMMGGQATN----IPLKVNTAGVIPIIFASSIMSFPGVIAQFAGKTNGTGIGSEI 300
Query: 316 LNPETSVG----ARP---W---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
L +S ++P W VY + FF + + I P E+AD + K G IP
Sbjct: 301 LRGLSSSNWCNPSQPQYSWGLLVYIVLCVFFAYFYT--SITFNPLEVADNIKKQGGFIPG 358
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVG 424
++PGK T +YLTK+ F G + L I+A ++ + + S G TS++I+VG
Sbjct: 359 IRPGKPTSDYLTKMLNYIIFIGAVGLIIVA----VIPFFFNGVFGAHVSFGGTSIIIVVG 414
Query: 425 SIIELRRSYQA 435
++E + ++
Sbjct: 415 VVLETLKQIES 425
>gi|374333991|ref|YP_005090678.1| preprotein translocase subunit SecY [Oceanimonas sp. GK1]
gi|372983678|gb|AEX99927.1| preprotein translocase subunit SecY [Oceanimonas sp. GK1]
Length = 443
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 198/436 (45%), Gaps = 30/436 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++ RL + IV+ R G ++P+PG D ++ D G++ E+ + GA +
Sbjct: 17 SELKSRLLFVLIAIVVFRAGSYVPIPGIDAAVLA-DLFQQQQGTIIEMFNMFSGGALERA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q+L + P L +L+KEG G KI Y + +L ++A+ +
Sbjct: 76 SILALGIMPYISASIIIQLLTVVHPPLAELKKEGEAGRRKISQYTRYGTLVLGTIQAIGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A LP + + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 AT-GLPNMMPGLVINPGLAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + Q + +L + VF VT + V V G R++ + Y A
Sbjct: 195 AGLPSAIGATAEQARQGELHILLLLLLAVIVFA-VTYFVVFVERGQRRIVVNY-----AK 248
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQHVKE 314
+ ++P +N +G+ P + + ++ FP +AS G + Q +
Sbjct: 249 RQQGRQVFAAQSTHLPLKVNMAGVIPAIFASSIILFPGTVASWFGQGEGWFANLLQELSL 308
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKAT 372
L P +P +Y +YA + F F A + P+E AD L K GA IP ++PG+ T
Sbjct: 309 TLQP-----GQP-LYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQT 362
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
Y+ K+ G L ++ + L + N F G TS+LIIV I++
Sbjct: 363 ARYIDKVMTRLTLVGALYITFICLVPQFL---MTAWNVQFYFGGTSLLIIVVVIMDFMAQ 419
Query: 433 YQAYNVMPSLSKALRR 448
Q + + LR+
Sbjct: 420 VQTHMMSHQYGDVLRK 435
>gi|260891574|ref|ZP_05902837.1| hypothetical protein GCWU000323_02789 [Leptotrichia hofstadii
F0254]
gi|260858682|gb|EEX73182.1| preprotein translocase, SecY subunit [Leptotrichia hofstadii F0254]
Length = 438
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 219/450 (48%), Gaps = 29/450 (6%)
Query: 10 IRLSSVLNNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG 68
+ L+ L++ ++ F E+ +R+ T ++I+++R+G I +PG + + +F G
Sbjct: 4 LTLAEALSSRVKAIFNIPELEKRVTFTLLMIMVARVGIHIAVPGINT----DAFKNFQQG 59
Query: 69 SVDELGDF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEK 122
+ + F GA + S F LGI P I ASI+ Q+L I P + +++KEG +K
Sbjct: 60 --NAIAQFLNLFSGGAVERASIFALGIVPYINASIVFQLLGVIFPKIDEMQKEGGKERDK 117
Query: 123 IKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTI 182
I + ++++ AI+++ +A + K ++ T L+ G + WI + I
Sbjct: 118 ITQWSRYVTIVLAIIQSFGIAVLMQNQGLVLEPGP-KFILSTVVLITGGTSFLMWISERI 176
Query: 183 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGL-LGVFTIVTMWAVV 241
S G G G+S++I + I+ G + +M+S G +LGL + F + V+
Sbjct: 177 SIRGIGNGTSMLIFLNIVAGLPTVISQMIS---GLPSGMGKVLLGLSIVAFVVFIALMVI 233
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
V R++ +QY G S + + Y+P IN SG+ P++ + L+A P L
Sbjct: 234 VQLAERRIPIQYAGKGSLGFGGGQSTVGK-RTYLPLKINMSGVMPIIFASVLMAAPPFLV 292
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNK 358
S++ + ++K L + + +Y ++A + +F+ F IA P +++D L +
Sbjct: 293 SMMKT---GNLKNFLAAQFE--PKGVLYLLLFAILITVFSFFYTLTIAFDPDKVSDDLKQ 347
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
G IP V+ GK T +YL K+ F + LS+L I Y+ ++ +G TS
Sbjct: 348 SGGTIPTVRAGKETADYLEKVATRVTFGSAIFLSLLGIMPNIWFGYVLKLP--VMLGGTS 405
Query: 419 VLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+LI+VG+ +EL +Y + + + R
Sbjct: 406 LLILVGTAVELLLQIDSYLAVKKMKGFINR 435
>gi|148381401|ref|YP_001255942.1| preprotein translocase subunit SecY [Clostridium botulinum A str.
ATCC 3502]
gi|153932787|ref|YP_001385776.1| preprotein translocase subunit SecY [Clostridium botulinum A str.
ATCC 19397]
gi|153935277|ref|YP_001389183.1| preprotein translocase subunit SecY [Clostridium botulinum A str.
Hall]
gi|153941211|ref|YP_001392814.1| preprotein translocase subunit SecY [Clostridium botulinum F str.
Langeland]
gi|168178852|ref|ZP_02613516.1| preprotein translocase, SecY subunit [Clostridium botulinum NCTC
2916]
gi|226950913|ref|YP_002806004.1| preprotein translocase subunit SecY [Clostridium botulinum A2 str.
Kyoto]
gi|384463777|ref|YP_005676372.1| preprotein translocase subunit SecY [Clostridium botulinum F str.
230613]
gi|387819742|ref|YP_005680089.1| preprotein translocase secY subunit (TC 3.A.5.1.1) [Clostridium
botulinum H04402 065]
gi|148290885|emb|CAL85021.1| preprotein translocase SecY subunit [Clostridium botulinum A str.
ATCC 3502]
gi|152928831|gb|ABS34331.1| preprotein translocase, SecY subunit [Clostridium botulinum A str.
ATCC 19397]
gi|152931191|gb|ABS36690.1| preprotein translocase, SecY subunit [Clostridium botulinum A str.
Hall]
gi|152937107|gb|ABS42605.1| preprotein translocase, SecY subunit [Clostridium botulinum F str.
Langeland]
gi|182670176|gb|EDT82152.1| preprotein translocase, SecY subunit [Clostridium botulinum NCTC
2916]
gi|226842775|gb|ACO85441.1| preprotein translocase, SecY subunit [Clostridium botulinum A2 str.
Kyoto]
gi|295320794|gb|ADG01172.1| preprotein translocase, SecY subunit [Clostridium botulinum F str.
230613]
gi|322807786|emb|CBZ05361.1| preprotein translocase secY subunit (TC 3.A.5.1.1) [Clostridium
botulinum H04402 065]
Length = 425
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 207/422 (49%), Gaps = 26/422 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 86
++R+RL T +I I R+G +IP+PG D + + +L GA + S F
Sbjct: 13 DLRKRLIFTLFMIAIFRMGNYIPVPGIDTSKLANLTQNGSLFGFYDLISGGAFSRFSIFA 72
Query: 87 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 146
+G+ P I +SI+MQ+L +PSL L KEG +G +KI+ Y + ++ A+++A + Y+
Sbjct: 73 MGVVPYINSSIIMQLLTIALPSLESLSKEGEEGRKKIQQYTRYGAVILAVIQA--FSTYA 130
Query: 147 LPYSIYAASHSVKHVMVTAFLLVCGAMT-MSWICDTISESGFGQGSSLIICVGILTGYTE 205
+ A K + + V A T + W D I+E G G G SLII V I++ +
Sbjct: 131 IIARAGALRDGSKLNLFIIIITVTTASTFLMWFGDKITEKGIGNGISLIIFVNIVSRFPS 190
Query: 206 TLYKMLSQLLGSSVRWWP---FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
T+Y ++ +V + F++ L +F +V V++ G R++ +QY G + +
Sbjct: 191 TIYSIVGLQKAETVNFVEVIVFIVIALALFLLV----VIMNLGERRIPVQYAGRAVGNKI 246
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILNPETS 321
+ +IP N+N S + ++ ++ FP + S F++ + LN +
Sbjct: 247 YKGQ-----STHIPINVNSSAVIGIIFAISVMQFPITIGQFWPESAFYKFIT--LNQYSP 299
Query: 322 VGARPWVYYTIY----AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
+ Y +Y FF + + + P E+A+ ++K IP ++PG+ T EY+
Sbjct: 300 FRDKSIAYIVLYFLLTVFFTWFYTVVTFK--PDEMAENMHKSSGFIPGIRPGEPTAEYIE 357
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYN 437
++ + GG +I+A I+ Y + +G S G TS+LI+VG ++ R ++
Sbjct: 358 RVITKSSIIGGTFAAIIAVFPIIMAAYSKF--QGISFGGTSMLIMVGFALDTIRQIESQL 415
Query: 438 VM 439
VM
Sbjct: 416 VM 417
>gi|256390160|ref|YP_003111724.1| preprotein translocase subunit SecY [Catenulispora acidiphila DSM
44928]
gi|256356386|gb|ACU69883.1| preprotein translocase, SecY subunit [Catenulispora acidiphila DSM
44928]
Length = 448
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 208/462 (45%), Gaps = 59/462 (12%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-LSFVSGSVD-- 71
+L A +F ++R++L T ++ + R+G IP PG D + + +S SG +
Sbjct: 1 MLTAFARAFRTPDLRKKLLFTLGIMALFRLGAHIPAPGVDTKALSACVGISKASGQGNGA 60
Query: 72 ----ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 127
L GA L+LS F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 LGLINLFSGGALLQLSIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGQTKITQYT 120
Query: 128 WWISLGFAILEA--VIVACYSLPYSIYAASHSVKHVM----------VTAFLLVCGAMTM 175
++++G AIL++ ++ + P ++ S +V+ V L G +
Sbjct: 121 RYLTIGLAILQSTTMLTLMKNNPSALLGPGCSGTNVIFQKVDWIGMAVMVITLTAGTTLI 180
Query: 176 SWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIV 235
W+ + I++ G G G SL+I I + +L+ + +++ WP G+L + ++
Sbjct: 181 MWLGELITDRGIGNGMSLLIFTSITANFPSSLWSIKQG--STTMDGWPVFFGVLLMGMLL 238
Query: 236 TMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLA 295
V V +G R++ +QY + S YIP +N +G+ PV+ + LL
Sbjct: 239 VGLVVFVEQGQRRIPVQYAKRMVGRRMYGGS-----STYIPMKVNQAGVIPVIFASSLLQ 293
Query: 296 FPSILASILGSPFWQHVKEILNPETSVGARPWV--------------YYTIYAFFVFLFN 341
P ++A+ NP + G WV Y Y + F
Sbjct: 294 LPLMVAN------------FTNPNATKGWAHWVNREFGMTTNGYSLAYSVTYFLLILGFA 341
Query: 342 IF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSST 399
F I +P EIAD + K G IP ++ GK T EYL + + G L L+++A
Sbjct: 342 FFYVSITFVPDEIADNMKKYGGFIPGIRAGKPTAEYLQYVSTRVTWPGALYLAVIAIIPM 401
Query: 400 ILDHYLRRINEGFSIGFTSVLIIVG----SIIELRRSYQAYN 437
I + F G T++LI+VG ++ ++ Q +N
Sbjct: 402 IALAEFHASGK-FPFGGTTILIMVGVGLETVKQIESQLQQHN 442
>gi|408828949|ref|ZP_11213839.1| preprotein translocase subunit SecY [Streptomyces somaliensis DSM
40738]
Length = 439
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 209/441 (47%), Gaps = 44/441 (9%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG----- 74
A +F ++R++L T +IV+ R+G IP+PG D + Q G+ + LG
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVLYRLGAHIPVPGVDYENVQQCVKQAQQGNNNLLGLMDMF 65
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++
Sbjct: 66 SGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGQAKITQYTRYLTVAL 125
Query: 135 AILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDTISES 185
AIL+ + + ++++ S+ + V + G + W+ + I++
Sbjct: 126 AILQGTGLVATAKSGALFSGCSVADQIVPDQSIFVITVMVITMTAGTALVMWLGELITDR 185
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWW-PFMLGLLGVFTIVTMWAVVVTE 244
G G G S+++ + I G+ +L+ + G + W F +L F +V + V V +
Sbjct: 186 GVGNGMSILMFISIAAGFPGSLWAIKES--GKLAKGWIEFGTVILIGFVMVAL-VVFVEQ 242
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
R++ +QY + + + YIP +N +G+ PV+ + LL P ++
Sbjct: 243 AQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPILIVQFA 297
Query: 305 GSP-------FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIAD 354
G+ QH+ V +P ++ IY F + F F +A N P+E+AD
Sbjct: 298 GNSTSGWSAWIQQHL---------VDGKP-IHTVIYFFLIVFFAFFYVAISFN-PEEVAD 346
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 414
+ K G IP ++ G+ T EYL+ + + G L L ++A T+ N F
Sbjct: 347 NMKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGGANANFPF 406
Query: 415 GFTSVLIIVGSIIELRRSYQA 435
G TS+LIIVG +E + ++
Sbjct: 407 GGTSILIIVGVGLETVKQIES 427
>gi|421863377|ref|ZP_16295075.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379139|emb|CBX22270.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 416
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 209/422 (49%), Gaps = 33/422 (7%)
Query: 39 IVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQLGISPQIVAS 96
+V+ RIG IP+PG D + + Y S G + L F G+ + S F +GI P I AS
Sbjct: 7 LVVFRIGAHIPVPGVDAVALAKLYESAGGGILGMLNMFSGGSLERFSIFAIGIMPYISAS 66
Query: 97 ILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASH 156
I++Q+ I+PSL L+KEG G + I Y + ++ AIL+++ VA + I S
Sbjct: 67 IIVQLASEILPSLKALKKEGEAGRKLITKYTRYGTVLLAILQSLGVASFVFQRGIVVTS- 125
Query: 157 SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLG 216
S + + T LV G M + W+ + I+E G G G SLII GI +G + ++++ +
Sbjct: 126 SFEFYVSTVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIASGIPSGITRLVAFVNQ 185
Query: 217 SSVRWWPFMLGLLGVFTIVTMWAVVV--TEGCRKVKLQYYGFKLASAARE-DSPITEVEP 273
++ ++ LL VF ++ + +VV RKV + Y A R+ +S +
Sbjct: 186 GTMS---ILMALLIVFGVLLLIYLVVYFESAQRKVPIHY-------AKRQFNSGLGNHNT 235
Query: 274 YIPFNINPSGMQPVLTTTYLLAFPSILASILG-----SPFWQHVKEILNPETSVGARPWV 328
++PF +N +G+ P + + ++ FPS L G S ++ V + + ++ +
Sbjct: 236 HMPFKLNMAGVIPPIFASSIILFPSTLLGWFGLTDTNSILYKIVGLLQHGQS-------L 288
Query: 329 YYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFW 386
Y ++A V F F A + PKE+A+ L K GA +P ++PG+ T YL K+ +
Sbjct: 289 YMVLFAATVIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLF 348
Query: 387 GGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKAL 446
G L ++I+ L L N F +G TS+LI+V ++ +Y + K +
Sbjct: 349 GALYITIICLIPEFLTTVL---NVPFYLGGTSLLILVVVTMDFSTQINSYRLTQQYDKLM 405
Query: 447 RR 448
R
Sbjct: 406 IR 407
>gi|416398022|ref|ZP_11686782.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Crocosphaera
watsonii WH 0003]
gi|357262601|gb|EHJ11715.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Crocosphaera
watsonii WH 0003]
Length = 438
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 218/445 (48%), Gaps = 54/445 (12%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDR----RLIPQD----YLS- 64
A E+F + + +R RL +T L+++ R G FIP+PG DR R I + +L
Sbjct: 10 TAQETFLQMAQAAGLRGRLLITIGLLILIRFGIFIPIPGIDRTEFARAISDNSVLGFLDI 69
Query: 65 FVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKI 123
F G + LG F LGI P I ASI+MQ+L +P+L L+K EG G KI
Sbjct: 70 FTGGGISTLG---------IFALGILPFINASIIMQLLTAAIPALEDLQKNEGEAGRRKI 120
Query: 124 KSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTIS 183
+++ G++++++ + L YA V T L G+M + W+ + I+
Sbjct: 121 SQITRYVAAGWSVIQSTAITIGLL--RPYALGDPFWFVPETVLALTAGSMFVMWVSELIT 178
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
E G G G+SL+I V I+ TL + + +Q G +L L+ + IV + V
Sbjct: 179 ERGIGNGASLLIFVNIVASLPRTLGQTIDYAQTGGRQAAAQVVILLLVFLVMIVGI--VF 236
Query: 242 VTEGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V EG R++ + SA R+ E Y+P +N G+ P++ + +L P
Sbjct: 237 VQEGTRRIPI-------ISARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLILPQS 289
Query: 300 LASILGSPFWQH---VKEILNPETSVGARP--WVYYTIYAFFVFLFNIFD---IANLPKE 351
LA F+++ V E+L + + RP WVY +Y+ + F+ F I N P++
Sbjct: 290 LAG-----FFRNDGAVSEVL-VQVANALRPGTWVYVGVYSLLILFFSYFYASLIVN-PED 342
Query: 352 IADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEG 411
++ L KMG+ IP ++PG+ T +YL + F G + LS +AT T+++ +
Sbjct: 343 VSKNLKKMGSSIPGLRPGEKTKQYLEGVLNRLTFLGAIFLSFVATVPTLVEGAT-GVTTF 401
Query: 412 FSIGFTSVLIIVGSIIELRRSYQAY 436
+G TS+LI+VG I+ + Q Y
Sbjct: 402 RGLGATSLLILVGVAIDTAKQIQTY 426
>gi|440545046|emb|CCP70560.1| preprotein translocase subunit SecY [Chlamydia trachomatis
L2b/Ams1]
Length = 457
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/460 (28%), Positives = 227/460 (49%), Gaps = 47/460 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 76
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRLFTLVL 125
Query: 135 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A ++L P + A S+K + T ++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMTTGTLLLMWVGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 237
IS+ G G G SLII +GIL + L + ++L LGS S +L L VF V +
Sbjct: 186 ISDKGIGNGISLIITLGILASFPSVLGSIFNKLNLGSQDPSEFGIVLLLILCAVFVFVLI 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVLTTTYLL 294
V++ EG RK+ +Q+ AR EV Y+P +N +G+ PV+ + LL
Sbjct: 246 ATVLIIEGVRKIPVQH--------ARRIIGRREVVGGGSYLPLKVNYAGVIPVIFASSLL 297
Query: 295 AFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTI-YAFFVFLFNIFDIANL--P 349
FP+ + L S + + + +L+P + V Y+I Y + F F A P
Sbjct: 298 MFPATIGQFLSSESSWLKRIATMLSPGS-------VAYSIFYVLLIIFFTYFWTATQFRP 350
Query: 350 KEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RI 408
++IA + K GA IP ++ GK T YL G + L+++A ++L LR
Sbjct: 351 EQIASEMKKNGAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVVAILPSVLGRILRVDA 410
Query: 409 NEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
N + +G T++LI+VG I++ + A+ ++ L++
Sbjct: 411 NVSYFLGGTAMLIVVGVILDTMKQIDAFLLVRRYDGVLKK 450
>gi|299768686|ref|YP_003730712.1| preprotein translocase subunit SecY [Acinetobacter oleivorans DR1]
gi|298698774|gb|ADI89339.1| preprotein translocase subunit SecY [Acinetobacter oleivorans DR1]
Length = 452
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 212/432 (49%), Gaps = 42/432 (9%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 23 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 78
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 138
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
AV + C L S ++ + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 AVGM-CAGLIGQGITLSVGLEFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 197
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 255
I++G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 198 IVSG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSVGVLAAIVFIEKAQRRIPVNY-- 251
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP-------- 307
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADANAGLIK 308
Query: 308 -FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
Q + +L+P +P +Y ++ + F F A + PKE+++ L + GA +P
Sbjct: 309 RSLQDLALVLSP-----GQP-LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVP 362
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG+ T YL I F G + ++++ IL FS+G TS+LI+V
Sbjct: 363 GIRPGEQTARYLDHILNRLTFIGAIYITVICLMPMILQ---SSFGIPFSLGGTSLLIVVV 419
Query: 425 SIIELRRSYQAY 436
+++ QA+
Sbjct: 420 VVMDFMAQLQAH 431
>gi|365873465|ref|ZP_09412998.1| preprotein translocase, SecY subunit [Thermanaerovibrio velox DSM
12556]
gi|363983552|gb|EHM09759.1| preprotein translocase, SecY subunit [Thermanaerovibrio velox DSM
12556]
Length = 431
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 217/442 (49%), Gaps = 26/442 (5%)
Query: 15 VLNNAAESFFKSEIRRR-LFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
++++ ++F +++ R LFV A L V R+G IP PG D + + F G V
Sbjct: 1 MIDSFRDAFRLPDLKNRFLFVLAALFV-YRLGAHIPTPGIDPEAMAR---LFERGGVLGF 56
Query: 74 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
D GA + S F LG+ P I +SI+MQ+L +VPSL +++KEG DG +KI Y +
Sbjct: 57 LDLFAGGALSRFSIFALGVVPYINSSIVMQLLTVVVPSLEKMQKEGEDGRKKITQYTRYG 116
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
++ FA+++++ + + ++ + V+ A + G++ + W+ + +S+ G G G
Sbjct: 117 TVIFALVQSIGMVSWLRGLGVFYGGF-LDGVLAVA-TVTTGSLAVMWLGEVMSDHGIGNG 174
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
S++I GI+ + + + + + +L L+ + V V++ EG RK+
Sbjct: 175 ISMLIFAGIVARIPGAIAQTFTMVRMGEMNILVVLLALV-IMVAVVAGCVMLQEGQRKLP 233
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
+QY A + YIP +N +G+ P++ + +L FP +A P +
Sbjct: 234 VQY-----AKRVVGNRVYGGQSTYIPLRVNTAGVIPIIFASSVLLFPYTIARFFSGPVAE 288
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKP 368
V+ I +P + VY +Y + F+ F A + P E+A+ + K G I ++P
Sbjct: 289 AVQRIFSPGSV------VYMILYVALIVFFSFFYTAVVFNPAELAENMKKYGGFILGIRP 342
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
GK T +Y+ K+ + G L L+ +A T++ L +N F G TSVLI+VG ++
Sbjct: 343 GKPTADYIEKVMSRITLGGALALAAVAIVPTLMSGLL-NVNT-FYFGGTSVLIVVGVALD 400
Query: 429 LRRSYQAYNVMPSLSKALRRYG 450
+ +M L+R G
Sbjct: 401 TVHQLEGQLLMRHYEGILKRRG 422
>gi|194334841|ref|YP_002016701.1| preprotein translocase subunit SecY [Prosthecochloris aestuarii DSM
271]
gi|194312659|gb|ACF47054.1| preprotein translocase, SecY subunit [Prosthecochloris aestuarii
DSM 271]
Length = 441
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 210/431 (48%), Gaps = 38/431 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
E+R+R+ T +L+ I R+G I +PG D + + S S D G F GA +
Sbjct: 15 ELRQRILYTLLLLFIYRLGSHITIPGVDAAAV---SNASSSHSNDLFGLFDLFVGGAFAR 71
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-- 139
S F LGI P I ASI++Q+L + P + +L+KEG +G +KI Y + ++ A L+A
Sbjct: 72 ASIFSLGIMPYISASIIVQLLGAVTPYVQKLQKEGEEGRQKINQYTRYGTVLIAALQAWG 131
Query: 140 --VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
V +A S +I +M T +L + + W+ + I+E G G G SLII +
Sbjct: 132 VSVSLASPSSFGTIVVPDPGFFFMMTTVLILTASTVFVMWLGEKITERGIGNGISLIIMI 191
Query: 198 GILTGYTETLYKMLSQL-LGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY--- 253
GIL + +++ + LGS + W +L + ++ VV+T G R++ +Q+
Sbjct: 192 GILARFPQSVIAEFQSVSLGS--KNWIIEFIILALMVLIVAAVVVLTVGTRRIPVQHAKR 249
Query: 254 -YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
G K+ + + YIP +N +G+ P++ ++ P+ S F+
Sbjct: 250 VVGRKMYGGSTQ---------YIPMRVNTAGVMPIIFAQSIMFLPNTFLS-----FFPES 295
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGK 370
+ + N T W Y ++ + F F IA PKE+AD + + G IP V+PGK
Sbjct: 296 EVMQNVATIFSYDSWWYALMFGTMIVFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGK 355
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--IGFTSVLIIVGSIIE 428
+T +++ I G + L+ +A T L + + GF+ G TS+LIIVG ++
Sbjct: 356 STADFIDNILTRITLPGAISLAFIAVLPTFLTKF-ANVTPGFAQFFGGTSLLIIVGVGLD 414
Query: 429 LRRSYQAYNVM 439
+ +++ +M
Sbjct: 415 TLQQVESHLLM 425
>gi|336436021|ref|ZP_08615734.1| preprotein translocase, SecY subunit [Lachnospiraceae bacterium
1_4_56FAA]
gi|336008061|gb|EGN38080.1| preprotein translocase, SecY subunit [Lachnospiraceae bacterium
1_4_56FAA]
Length = 450
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 220/456 (48%), Gaps = 36/456 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ +F EIR+++F T +++++ R G +P PG D I Q++ + +G
Sbjct: 1 MLDTVRRAFRIEEIRKKIFYTFLMLIVVRFGSQLPAPGVDPTFI-QNFFANQTGDAFNFF 59
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
D G+ ++S F L I+P I +SI+MQ+L +P L ++KEG DG +KI + +++
Sbjct: 60 DAFTGGSFTQMSVFALSITPYITSSIIMQLLTIAIPKLEDMQKEGADGRKKIAAITRYVT 119
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC----GAMTMSWICDTISESGF 187
+ A++E+ +A V+ V A ++VC G+ + WI + I+E G
Sbjct: 120 VVLALIESTAMAV-----GFGRQGLLVEFNFVNAAIVVCTLTAGSAFLMWIGERITEKGV 174
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSV--RWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G S+++ + IL+ + L ++ +Q + + + +L V V ++ +++ +G
Sbjct: 175 GNGISIVLLINILSRVPQDLVQLYTQFISGKTLAKRILAAVIILLVLLAVVVFVIILQDG 234
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL- 304
R++ +QY + + +IP +N +G+ P++ + L+ P ++A+ L
Sbjct: 235 ERRIAVQY-----SQKVQGRKTYGGRSSHIPLKVNTAGVIPIIFASSLMQTPIVIATFLG 289
Query: 305 ---GSPFWQHVKEILN------PETSVGARPWVYYTIYA-FFVFLFNIFDIANLPKEIAD 354
G+ + LN P+ + + ++Y I FF + + I P EIA+
Sbjct: 290 KGDGTGIGSQILRALNSNNWCDPDNLIYSIGLIFYIILTIFFAYFYT--SITFNPLEIAN 347
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 414
+ K G +P ++PGK T+EY KI F G L I+ + S
Sbjct: 348 NMKKSGGFVPGIRPGKPTVEYFQKILNYIIFIGACGLIIVQVIPFFFNGVF---GANVSF 404
Query: 415 GFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRYG 450
G TS++IIVG ++E + ++ ++ + + L G
Sbjct: 405 GGTSLIIIVGVVLETIKQIESQMLVRNYTGFLNNKG 440
>gi|318058108|ref|ZP_07976831.1| preprotein translocase subunit SecY [Streptomyces sp. SA3_actG]
gi|318076039|ref|ZP_07983371.1| preprotein translocase subunit SecY [Streptomyces sp. SA3_actF]
Length = 437
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 212/438 (48%), Gaps = 30/438 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSG--SV 70
+L A +F ++R++L T +IVI R+G +P+PG + + + + + SG +
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVIYRLGTHVPIPGVNYKNVQTCIEQANTNSGLFGL 60
Query: 71 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
L GA L+++ F LGI P I +SI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNLFSGGALLQITIFALGILPYITSSIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYL 120
Query: 131 SLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDT 181
++ A+L+ + + +I+ S+ +V + G T+ W+ +
Sbjct: 121 TVALAVLQGTGLVATARSGAIFQGCSVAGDIVPDQSIFTTIVMVLTMTAGTATVMWLGEL 180
Query: 182 ISESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 239
+++ G G G S+++ V I G+ +L+ K L G + + +L V ++
Sbjct: 181 VTDRGIGNGMSILMFVSIAAGFPGSLWAIKKGGDLAGGWIEFGTVIL----VGLVMVALV 236
Query: 240 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V V + R++ +QY + + + YIP +N +G+ PV+ + LL P++
Sbjct: 237 VFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPAL 291
Query: 300 LASILGSPF-WQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLN 357
+ S W +++ L +TS +Y+ + FF F + I+ P+E+AD +
Sbjct: 292 IVQFTDSQASWATWIRDNL-ADTSAWPHVVLYFLLIVFFAFFY--VAISFNPEEVADNMK 348
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++ G+ T EYL+ + + G L L ++A T+ N F G T
Sbjct: 349 KYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTLALAGFGA-NSNFPFGGT 407
Query: 418 SVLIIVGSIIELRRSYQA 435
S+LIIVG +E + ++
Sbjct: 408 SILIIVGVGLETVKQIES 425
>gi|170754866|ref|YP_001783101.1| preprotein translocase subunit SecY [Clostridium botulinum B1 str.
Okra]
gi|429245548|ref|ZP_19208928.1| preprotein translocase subunit SecY [Clostridium botulinum
CFSAN001628]
gi|169120078|gb|ACA43914.1| preprotein translocase, SecY subunit [Clostridium botulinum B1 str.
Okra]
gi|428757434|gb|EKX79926.1| preprotein translocase subunit SecY [Clostridium botulinum
CFSAN001628]
Length = 425
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 207/422 (49%), Gaps = 26/422 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 86
++R+RL T +I I R+G +IP+PG D + + +L GA + S F
Sbjct: 13 DLRKRLIFTLFMIAIFRMGNYIPVPGIDTSKLSNLTQNGSLFGFYDLISGGAFSRFSIFA 72
Query: 87 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 146
+G+ P I +SI+MQ+L +PSL L KEG +G +KI+ Y + ++ A+++A + Y+
Sbjct: 73 MGVVPYINSSIIMQLLTIALPSLESLSKEGEEGRKKIQQYTRYGAVILAVIQA--FSTYA 130
Query: 147 LPYSIYAASHSVKHVMVTAFLLVCGAMT-MSWICDTISESGFGQGSSLIICVGILTGYTE 205
+ A K + + V A T + W D I+E G G G SLII V I++ +
Sbjct: 131 IIARAGALRDGSKLNLFIIIITVTTASTFLMWFGDKITEKGIGNGISLIIFVNIVSRFPS 190
Query: 206 TLYKMLSQLLGSSVRWWP---FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
T+Y ++ +V + F++ L +F +V V++ G R++ +QY G + +
Sbjct: 191 TIYSIVGLQKAETVNFVEVIVFIVIALALFLLV----VIMNLGERRIPVQYAGRAVGNKI 246
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILNPETS 321
+ +IP N+N S + ++ ++ FP + S F++ + LN +
Sbjct: 247 YKGQ-----STHIPINVNSSAVIGIIFAISVMQFPITIGQFWPESAFYKFIT--LNQYSP 299
Query: 322 VGARPWVYYTIY----AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
+ Y +Y FF + + + P E+A+ ++K IP ++PG+ T EY+
Sbjct: 300 FRDKSIAYIVLYFLLTVFFTWFYTVVTFK--PDEMAENMHKSSGFIPGIRPGEPTAEYIE 357
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYN 437
++ + GG +I+A I+ Y + +G S G TS+LI+VG ++ R ++
Sbjct: 358 RVITKSSIIGGTFAAIIAVFPIIMAAYSKF--QGISFGGTSMLIMVGFALDTIRQIESQL 415
Query: 438 VM 439
VM
Sbjct: 416 VM 417
>gi|300022561|ref|YP_003755172.1| preprotein translocase subunit SecY [Hyphomicrobium denitrificans
ATCC 51888]
gi|299524382|gb|ADJ22851.1| preprotein translocase, SecY subunit [Hyphomicrobium denitrificans
ATCC 51888]
Length = 447
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 211/446 (47%), Gaps = 45/446 (10%)
Query: 11 RLSSVLNNAAESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS 69
+L+S LN +A F K+E ++RRL+ T +++ R+G FIP+PG + + + S G
Sbjct: 7 QLASNLNFSA--FAKAEDLKRRLWFTLGALIVYRLGTFIPMPGINPAAFAETFKSQAGGI 64
Query: 70 VDELGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 127
+ F GA +L+ F L I P I ASI+MQ++ I P L L+KEG G ++I Y
Sbjct: 65 LGMFNMFSGGALERLAIFALNIMPYISASIIMQLMTSISPKLEALKKEGEAGRKQINQYT 124
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV---------TAFLLVCGAMTMSWI 178
++++ A L+A Y + + + +S V++ T LV G + + W+
Sbjct: 125 RYLTVVLAALQA-----YGIAVGLEGSQNSAGAVVLDPGLFFRATTVITLVGGTVFLMWL 179
Query: 179 CDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMW 238
+ +++ G G G+SLII GI+ G + ++ L + P +L V + +
Sbjct: 180 GEQVTQRGVGNGTSLIIFAGIVAGLPGAVVQLFE--LSRTGSISPAILLFFIVLALAVVA 237
Query: 239 AVVVTEGC-RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
A+V E R++ +QY ++ + + ++P +NPSG+ P + + LL P
Sbjct: 238 AIVFCEQAQRRLLVQYPKRQVGNKMFQGE-----ASHLPLKLNPSGVIPPIFASSLLLLP 292
Query: 298 SILASILG--SPFWQHVKEILNPETSV-GARPWVYYTIYAFFVFLFNIFDIANL--PKEI 352
+A P W LN ++ G+ ++ IYA + F F A + PKE
Sbjct: 293 ITVAQFTAGQGPEW------LNTAVAMLGSGQPLHLFIYAAMIIFFTFFYTAVVINPKET 346
Query: 353 ADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGF 412
AD L K G +P ++PG+ T EY+ + G L L+ + IL Y G
Sbjct: 347 ADNLRKYGGFLPGIRPGEKTAEYIDYVMTRITVVGALYLAAVCVLPEILTSY-----AGI 401
Query: 413 SI--GFTSVLIIVGSIIELRRSYQAY 436
+ G TS+LI V ++ Q +
Sbjct: 402 PLYFGGTSLLIAVSVTMDTVSQVQGH 427
>gi|333376293|ref|ZP_08468079.1| preprotein translocase subunit SecY [Kingella kingae ATCC 23330]
gi|332968431|gb|EGK07498.1| preprotein translocase subunit SecY [Kingella kingae ATCC 23330]
Length = 434
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 210/428 (49%), Gaps = 42/428 (9%)
Query: 27 EIRRR-LFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV-SGSVDELGDF--GAELKL 82
++R+R LF+ LIV RIG +P+PG D + + Y + SG + L F G+ +
Sbjct: 18 DLRKRVLFLLGALIVF-RIGAHVPVPGVDAAALAKLYQNVAGSGILGMLNMFSGGSLERF 76
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F +GI P I ASI+MQ+ IVPSL L+KEG G + I Y ++ A +++ V
Sbjct: 77 SIFAIGIMPYISASIIMQLAGEIVPSLKALKKEGDAGRKIITKYTRIGTVFLATAQSIGV 136
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
A + L ++ +++ + T LV G M + W+ + I+E G G G SL+I GI+ G
Sbjct: 137 AKFVLQQNVVVIP-AMEFYISTISCLVGGTMFLMWLGEQITERGLGNGISLLITAGIIAG 195
Query: 203 YTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLA 259
++ L+ G + +LGLLG+ +AVV E RK+ + Y
Sbjct: 196 VPSGAIQLWTLATSSGMPLTAVGIVLGLLGM-----TYAVVYFESAQRKIPIHY------ 244
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 319
A R+ + ++PF +N +G+ P + + ++ FPS+ AS G+ NP
Sbjct: 245 -AKRQFGGLDSQNTHMPFKLNMAGVIPPIFASSIIMFPSMFASWFGTD---------NPN 294
Query: 320 -------TSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGK 370
T++ Y ++A + F F +A PKE+A+ L K GA +P ++PG+
Sbjct: 295 SWFAKILTALQHGQPAYIVLFAITIIFFCYFYTALAFSPKEMAENLKKSGAFVPGIRPGE 354
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
T +YL + F+G L ++++ +L + F +G TS+LI+V ++
Sbjct: 355 QTAQYLENVVLRLTFFGALYITVICLIPELLTAF---AGIPFYLGGTSLLILVVVTMDFN 411
Query: 431 RSYQAYNV 438
+Y V
Sbjct: 412 TQLTSYLV 419
>gi|425737498|ref|ZP_18855770.1| preprotein translocase subunit SecY [Staphylococcus massiliensis
S46]
gi|425481752|gb|EKU48910.1| preprotein translocase subunit SecY [Staphylococcus massiliensis
S46]
Length = 431
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 206/427 (48%), Gaps = 28/427 (6%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 78
+FFK+ E+R ++F T ++VI ++G +IP PG + D G D + FG A
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKLGTYIPAPGVNPDAF--DSKQGSQGVTDLMNTFGGGA 64
Query: 79 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
S F +GI P I ASI+MQ+L IVP + ++G G KI + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFKEWAEQGDVGRRKINNVTRYFAIVLAFI 124
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC-----GAMTMSWICDTISESGFGQGSS 192
+++ S ++ Y + + ++LL+ G + W+ + I++ G G G S
Sbjct: 125 QSI---GMSFQFNNYLKGQLITDNTIWSYLLIAIVLTTGTAFLMWLGEQITQHGVGNGIS 181
Query: 193 LIICVGILTGYTETLYKMLSQLL---GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
+II GIL+ +L + Q + W +LGL+ ++T+ A+ V + RK+
Sbjct: 182 IIIFAGILSTLPASLIQFYQQAFVGQDDTSMAWLKVLGLILGMILLTIGAIYVLQAIRKI 241
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 309
+QY K R S T Y+P +N +G+ PV+ P L W
Sbjct: 242 PIQY-AKKQTGQQRLGSNAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPDAAW 296
Query: 310 -QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKP 368
Q + + +P +VG VY + F + + + P+++A+ L K G+ +P ++P
Sbjct: 297 AQKISDYADPSHNVGM--IVYVILIIAFTYFYAFVQVN--PEKMAENLQKQGSYVPGIRP 352
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G+ T +Y+TK+ F G + L+ ++ IL L + + +G TS+LI++G IE
Sbjct: 353 GEQTKKYITKVLYRLTFVGSIFLAAISILP-ILGTKLMNLPQSLQLGGTSLLIVIGVAIE 411
Query: 429 LRRSYQA 435
+S +A
Sbjct: 412 TMKSLEA 418
>gi|302553562|ref|ZP_07305904.1| preprotein translocase, SecY subunit [Streptomyces
viridochromogenes DSM 40736]
gi|302471180|gb|EFL34273.1| preprotein translocase, SecY subunit [Streptomyces
viridochromogenes DSM 40736]
Length = 437
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 212/439 (48%), Gaps = 32/439 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T +IV+ R+G IP+PG D R + Q + + G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVVYRVGTHIPIPGVDYRNV-QTCIDAAQANTGLFG 59
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 130 ISLGFAILEAVIVACYSLPYSIY----AASHSV--KHVMVTAFLLV---CGAMTMSWICD 180
+++ AIL+ + + +++ AS V + + VT +++ G + W+ +
Sbjct: 120 LTIALAILQGTGLVATARSGALFQGCPVASQIVPDQSIFVTITMVITMTAGTAAVMWLGE 179
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I++ G G G S+++ + I + L+ + Q GS W ++ V ++ V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKEQ--GSLAGGWIEFGTVILVGLVMVGLVV 237
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALV 292
Query: 301 ASIL-GSPFWQHVKEILNPETSVGARPWV---YYTIYAFFVFLFNIFDIANLPKEIADYL 356
A G+ W K + G P+ Y+ + FF F + I+ P+E+AD +
Sbjct: 293 AQFAGGNSGW---KTWIEQHFVKGDHPYYIASYFLLIVFFAFFY--VAISFNPEEVADNM 347
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G
Sbjct: 348 KKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALVGFGA-NQNFPFGG 406
Query: 417 TSVLIIVGSIIELRRSYQA 435
TS+LIIVG +E + ++
Sbjct: 407 TSILIIVGVGLETVKQIES 425
>gi|358465900|ref|ZP_09175785.1| hypothetical protein HMPREF9093_00245 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357069605|gb|EHI79498.1| hypothetical protein HMPREF9093_00245 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 426
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 213/423 (50%), Gaps = 32/423 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLI----PQDYLSFVSGSVDELGDFGAELK 81
E+R R+ T ++ +++R+G IP PG D RL D LS+++ + GA +
Sbjct: 19 ELRERIIFTLLMFLVARVGTLIPAPGVDVDRLASMASKSDVLSYIN-----MFSGGAFTR 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI++ +L I+P L +++KEG G +I + ++++ A+++
Sbjct: 74 ISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTRYLTIALAVIQGTG 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
V C L + + + T L G + + W+ + IS G G G SLII + +++
Sbjct: 134 V-CLWLQSVGLVYNPGISFFVRTITTLTAGTVFLMWVGEQISVKGIGNGVSLIIFLNVIS 192
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLAS 260
++ + + ++ G F+ L+ VT+ +V+ + G RK+ + Y G +S
Sbjct: 193 RAPSSVIQTVQKMQGDKFLIPLFV--LVAFLATVTIAGIVLFQLGQRKIPIHYVGKGFSS 250
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
I E + +IP +N +G+ PV+ + + P ++ + L S +K L+
Sbjct: 251 KGG----IGE-KSFIPLRLNTAGVMPVIFASVFMLIPGVIVNALPSDL--QLKTTLS--I 301
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTK 378
G VY +YA + F+ F A + P+++A+ L + G IP ++PG+ T+EYL
Sbjct: 302 VFGQNHPVYMILYALVIMFFSFFYTALVFDPEKVAENLRQGGGTIPGIRPGEETVEYLEG 361
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQAY 436
+ + + GGL L++++ + Y+ + G + G T ++I+VG ++ + A+
Sbjct: 362 VASRITWGGGLFLAVIS-----ILPYVIFTSMGLPVYFGGTGIIIVVGVALDTIQQIDAH 416
Query: 437 NVM 439
VM
Sbjct: 417 LVM 419
>gi|403251563|ref|ZP_10917896.1| preprotein translocase subunit SecY [actinobacterium SCGC
AAA027-L06]
gi|402915108|gb|EJX36098.1| preprotein translocase subunit SecY [actinobacterium SCGC
AAA027-L06]
Length = 432
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 213/444 (47%), Gaps = 37/444 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ ++F ++R+++F T ++ + R+G IP PG + + + +G + L
Sbjct: 2 LLSAFGKAFKTPDLRKKIFFTLSIMALFRLGSVIPTPGVSYVNVQECLATANTGGLFGLI 61
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+ GA L+LS F LGI P I +SI++Q+L ++P L+KEG G K+ Y +++
Sbjct: 62 NLFSGGALLQLSVFALGIMPYITSSIIVQLLTVVIPRFETLKKEGQAGTAKLTQYTRYLT 121
Query: 132 LGFAILEAV-IVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTIS 183
+G AIL++ ++A + I+ S + ++ ++ G + W+ + I+
Sbjct: 122 IGLAILQSTGLIAVARITGRIFPNCSLPIIPDTSWQRIITMIAVMTAGTSVIMWLGELIT 181
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 243
+ G G G S++I I + L+ + Q + W L ++ V ++ V V
Sbjct: 182 DRGVGNGMSILIFTSIAASFPGQLWSIKLQ------KGWFAFLFIMAVGVLIVAAVVFVE 235
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
+ R++ +QY ++ R+ T YIP +N SG+ PV+ + LL PS++ +
Sbjct: 236 QAQRRIPVQYAKRQV---GRQQYGGTST--YIPIKVNQSGVIPVIFASSLLYIPSLIVNF 290
Query: 304 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGA 361
GS Q + V + Y +YA + F F +A P E++D + K G
Sbjct: 291 SGS---QAAWATWISKNLVSGDNFFYIGVYALLIVFFTYFYVAITFNPDEVSDNMKKYGG 347
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
IP ++ GK T EYL + + G L LSI+A I L + ++ F G T++LI
Sbjct: 348 FIPGIRAGKPTSEYLQYVLSRITAPGALYLSIVAIIPFI-ALILFQASQNFPFGGTAILI 406
Query: 422 IVGSIIEL---------RRSYQAY 436
+VG ++ +RSY+ +
Sbjct: 407 VVGVGLDTAKQIESQLQQRSYEGF 430
>gi|189501634|ref|YP_001957351.1| preprotein translocase subunit SecY [Candidatus Amoebophilus
asiaticus 5a2]
gi|189497075|gb|ACE05622.1| preprotein translocase, SecY subunit [Candidatus Amoebophilus
asiaticus 5a2]
Length = 435
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 208/433 (48%), Gaps = 43/433 (9%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL 80
FF E+R R+ T L+++ R+G FI LPG D I G + L F GA
Sbjct: 12 FFIPELRSRILTTIGLLLVFRLGAFIVLPGIDATRIAGK----AKGILGLLDIFLGGAFS 67
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+S F LG+ P I ASI +Q+L VP ++++EG G + + + +++ A++++
Sbjct: 68 NVSIFGLGVVPYISASIAVQLLTVAVPYFQKIQREGQAGRKTLSNITKALTIVIAMIQSA 127
Query: 141 IVACYSLPYSIYAASHSVKHVMVTA--------FLLVCGAMTMSWICDTISESGFGQGSS 192
S AA+ S +M++ F+L G M WI D I++ G G G S
Sbjct: 128 ---------SYLAATVSTDSIMISKPLFYILSLFILPAGTMACMWIGDRITDKGIGNGVS 178
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
++I +GI++ ++ +L S F+ + +F IV + V+ T+ R++ LQ
Sbjct: 179 MLIMIGIVSSLPGAFFEEF--VLRGSRGLLIFIFEIFALFLIV-VSVVMFTQATRRIPLQ 235
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--SPFWQ 310
Y A + YIP +N SG+ P++ L+ P+++++ S
Sbjct: 236 YA----KQMATSGGIYSGQRQYIPLKLNSSGVMPIIFAQVLMFLPALVSNFFANKSEKMA 291
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKP 368
V I T+ W Y +++ + F F I+ P +IAD + + + IP +KP
Sbjct: 292 MVSRIFGDFTT-----WQYNLVFSILIIAFTYFYTAISINPMQIADDMKRGSSFIPGIKP 346
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--IGFTSVLIIVGSI 426
GK T ++ I + G L L+I+A + Y+ +++GFS G TS+LI+VG +
Sbjct: 347 GKPTASFIDDILSKITLPGSLFLAIIAILPGL--AYMAGLSKGFSRFFGGTSLLIMVGVV 404
Query: 427 IELRRSYQAYNVM 439
++ + ++Y +M
Sbjct: 405 LDSLQQIESYLLM 417
>gi|381395965|ref|ZP_09921657.1| preprotein translocase subunit SecY [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379328145|dbj|GAB56790.1| preprotein translocase subunit SecY [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 436
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 195/435 (44%), Gaps = 30/435 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
SE+R RLF I++ R+G ++P+PG D ++ Q + V F GA + S
Sbjct: 15 SELRSRLFFVLGAIIVFRLGSYVPIPGIDSNVLSQIFEQQTGTIVGMFNMFSGGALERAS 74
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
LGI P I ASI+MQ+L + +L+KEG G KI Y +++L A +++ +A
Sbjct: 75 VLALGIMPYITASIIMQLLAAVHEPFKELKKEGQSGQRKISQYTRYLTLILASFQSIGIA 134
Query: 144 CYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
LP I + LV G M + W+ + I+E G G G S++I GI+
Sbjct: 135 T-GLPQMIPGLVTDPGLAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVA 193
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 261
G + + Q ++ F+L L + +T V V R++ + Y A
Sbjct: 194 GLPSAIGQTAEQARQGEIQLL-FLLVLAAIIIALTYLVVFVERAQRRIVVNY-----AKR 247
Query: 262 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEILN 317
+ ++P +N +G+ P + + ++ FPS L+ +LG F +L+
Sbjct: 248 QQGRKVFAAQSSHLPLKVNMAGVIPPIFASSIILFPSTLSGMLGQNENFSFLTDFALLLS 307
Query: 318 PETSVGARPWVYYTIYA----FFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATI 373
P +P +Y +YA FF F + P++ AD L K GA +P ++PG+ T
Sbjct: 308 P-----GQP-LYVMLYAATIIFFCFFYTALQFN--PRDTADNLKKSGAFVPGIRPGEQTS 359
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
Y+ K+ G L ++ + + + L N F G TS+LII +++
Sbjct: 360 RYIDKVMTRLTLAGALYITFVC---LVPEFLLLWFNVPFYFGGTSLLIICVVVMDFMAQV 416
Query: 434 QAYNVMPSLSKALRR 448
Q + + L++
Sbjct: 417 QTHLMSHQYGDVLKK 431
>gi|451943272|ref|YP_007463908.1| preprotein translocase subunit SecY [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
gi|451902659|gb|AGF71546.1| preprotein translocase subunit SecY [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
Length = 440
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 204/427 (47%), Gaps = 40/427 (9%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY--LSFVSGSVDELGDF-- 76
++F ++R+++ T V+I++ R+G IP PG D I L+ GSV L +
Sbjct: 6 QAFKDVDLRKKIIFTVVMIILYRVGAQIPSPGVDYASISGRLRDLTQEEGSVYSLINLFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F +G+ P I ASI++Q+L ++P +L+KEG G K+ Y +++L A
Sbjct: 66 GGALLQLSVFAIGVMPFITASIIVQLLTVVIPHFEELKKEGQSGQTKMNQYTRYLTLALA 125
Query: 136 ILE-AVIVACYSLPY------SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFG 188
+L+ A IVA + A ++ +++ ++ GA+ + W+ + I+E G G
Sbjct: 126 LLQSAGIVALADREQLLGAGIQVLDADRTIWDLLILVLVMTSGAILVMWLGELITEKGVG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
G SL+I GI T +LS G ++ I+ + V V +G R+
Sbjct: 186 NGMSLLIFAGIATRIPTDGMNILSNSGGL------VFAAVVAAVVILVIGVVFVEQGQRR 239
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-- 306
+ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 240 IPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNSGT 294
Query: 307 -----PFWQ-HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNK 358
+WQ +V + L +S W Y +Y + F+ F + P + A+ + K
Sbjct: 295 AVPPDNWWQRNVIQYLQTPSS-----WQYIVLYFVLIIFFSYFYVSVQYDPHDQAENMKK 349
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI-LDHYLRRINEGFS-IGF 416
G IP ++PG+ T EYL + F G L I+A I LD + + G + G
Sbjct: 350 YGGFIPGIRPGRPTAEYLAYVMNRLLFVGAAYLGIIAVLPNIALDLGVGNASAGMTAFGG 409
Query: 417 TSVLIIV 423
T++LI+V
Sbjct: 410 TAILIMV 416
>gi|415886259|ref|ZP_11548082.1| preprotein translocase subunit SecY [Bacillus methanolicus MGA3]
gi|387588912|gb|EIJ81233.1| preprotein translocase subunit SecY [Bacillus methanolicus MGA3]
Length = 431
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 204/427 (47%), Gaps = 36/427 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP-QDYLSFVSGSVDELGDFGAELKLSF 84
EIRR++ T +++++ RIG FIP+P + ++ QD L+ V G ++ G GA S
Sbjct: 12 GEIRRKIIFTLLMLIVFRIGAFIPVPNVNAEVLKVQDQLN-VFGVLNTFGG-GALKNFSI 69
Query: 85 FQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F +GI P I ASI++Q+L +VP + K+G G K+ + + ++ +++A
Sbjct: 70 FAMGIMPYITASIIVQLLQMDVVPKFTEWSKQGEVGRRKLAQFTRYFTIVLGLIQA---- 125
Query: 144 CYSLPYSIYAASHS-------VKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
+ + Y S + ++ A +L G + W+ + I+ G G G S+II
Sbjct: 126 -FGMSYGFNNMSRGMLIVDPGISTYLLIAIVLTAGTAFLMWLGEQITAKGVGNGISIIIF 184
Query: 197 VGILTGYTETLYKMLSQLLGSS-----VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
GI+ G T ++ +Q L +S +R +L +L V ++ + + + + RK+ +
Sbjct: 185 AGIVAGIPSTFNQIYAQQLENSGEQLFLRIITVVLIVLAVIALI-VGVIFIQQALRKIPI 243
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---PF 308
QY +A +P+ ++P +N +G+ PV+ + P +AS G
Sbjct: 244 QYANRMVAG----RNPVGGQSTHLPLKVNSAGVIPVIFAVSFIVTPPTIASFFGQNDVTL 299
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKP 368
W +++ + +G +V I + + F I P+++A+ L K G IP ++P
Sbjct: 300 W--IQKTFDYTKPIGMICYVALIIAFTYFYAF----IQVNPEQVAENLKKQGGYIPGIRP 353
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
GK T EYLT++ G L L+ +A + + IG TS+LI+VG +E
Sbjct: 354 GKNTQEYLTRVLYRLTLPGSLFLAFIAIMPVFFIQF-AGLPHSAKIGGTSLLIVVGVALE 412
Query: 429 LRRSYQA 435
+ +A
Sbjct: 413 TMKQLEA 419
>gi|406983714|gb|EKE04874.1| hypothetical protein ACD_19C00429G0034 [uncultured bacterium]
Length = 426
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 209/433 (48%), Gaps = 44/433 (10%)
Query: 22 SFFKS-----EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVDELG 74
FFK +R+++ +TA +++ RI IP G DR D LS F + + L
Sbjct: 7 QFFKKIAESPRLRKKILITAGALLVFRIAAHIPAAGIDR-----DSLSALFNASPLLSLL 61
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
D G S LG++P I ASI++Q+L ++VPSL +L+KEG G EKI Y ++
Sbjct: 62 DVFSGGTLANFSIMALGLNPYINASIILQILGYVVPSLEELQKEGEYGQEKINQYTRLLT 121
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVC-----GAMTMSWICDTISESG 186
+ AI+++ + Y++ + + + ++ + + +C G M W+ D I+E
Sbjct: 122 VPLAIMQSFGM------YALLKSQNIIGNLDMMQLIFLCLTMTGGTMLAVWLGDLITEYA 175
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLG-SSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
F G S +I VGI++ L + +S S+++ F+ L V + + V E
Sbjct: 176 FKSGISFLIFVGIISRLPIVLGQTISTFRSEDSLKYIIFVAVALAVMATI----IFVNEA 231
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
R++ + Y A+ + + + Y+P +N +G+ P++ L+ PS++ LG
Sbjct: 232 IRQIPISY--------AKATKGLKQAQSYLPLRLNQAGVIPIIFAVSLVLMPSMITQFLG 283
Query: 306 SPFWQHVKEI-LNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGAR 362
+ V+ I N + + VY IY V F F + P++I++ L K G
Sbjct: 284 ASGNTTVQMIATNIQKYFNPQSVVYNVIYFLLVVGFTYFYTSVVFNPEKISENLQKGGGF 343
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++PG +TI+YLT + G + L ++A +++ + N +IG T VLI
Sbjct: 344 IPGIRPGTSTIKYLTFVLNRITIVGAVFLGLVAVLPSMVQGTIGINN--LAIGGTGVLIA 401
Query: 423 VGSIIELRRSYQA 435
+ ++E+ R +
Sbjct: 402 ISVVLEIIREIEG 414
>gi|326334525|ref|ZP_08200736.1| preprotein translocase subunit SecY [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325693294|gb|EGD35222.1| preprotein translocase subunit SecY [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 442
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 205/423 (48%), Gaps = 24/423 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF--GAELKL 82
E+R R+ +T ++++ R G I LPG D +L + G +D L F GA K
Sbjct: 15 EELRNRIILTLGILLVYRFGAHIILPGIDAEKLSNLTQKTSEGGLLDILNAFTGGAFAKA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI- 141
S F LGI P I ASI++Q++ +P L +L++EG G +I W+++ I++A
Sbjct: 75 SVFALGIMPYISASIVVQLMGIAIPYLQKLQQEGESGRRRINQITRWLTIAICIVQAPAY 134
Query: 142 ---VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
++ +P + + ++ + +LV G + W+ + I++ G G G SL+I VG
Sbjct: 135 LYSISALGVPEEAFLLGKGLSFIIPSVIILVTGTIFAMWLGEKITDKGVGNGISLLIMVG 194
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ + ++++ + +L LL V + + +T R++ +QY +
Sbjct: 195 IIARMPHAFFGEMNRVHSPMIVIVEILLWLL-----VILGCIYLTLAVRQIPVQYA--RR 247
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
+ + + I YIP +N +G+ P++ ++ P+ LA + S + ++
Sbjct: 248 TTGGQVERNIFGARQYIPLKLNSAGVMPIIFAQAIMFVPAALAGLSKSDWAIRIQNAFRS 307
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIA-NLP-KEIADYLNKMGARIPNVKPGKATIEYL 376
W Y ++ + +F F A +P ++AD L + G IP VKPG+ T EYL
Sbjct: 308 PFEF----W-YNVLFGLLIIIFTYFYTAITVPSNKMADDLKRNGGFIPGVKPGQETSEYL 362
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHY-LRRINEGFSI--GFTSVLIIVGSIIELRRSY 433
KI + F G L L +A I++ L I++ +++ G TS+LI+VG I+ +
Sbjct: 363 DKIMSLITFPGSLFLVAIAVLPAIVNKIPLLEIDQQWALFYGGTSLLILVGVAIDTMQQV 422
Query: 434 QAY 436
+Y
Sbjct: 423 NSY 425
>gi|425735754|ref|ZP_18854066.1| preprotein translocase subunit SecY [Brevibacterium casei S18]
gi|425479346|gb|EKU46523.1| preprotein translocase subunit SecY [Brevibacterium casei S18]
Length = 433
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 202/430 (46%), Gaps = 30/430 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVDELGDF-- 76
+F ++R +L T +IVI R+G FIP PG D + + S SG + F
Sbjct: 7 RAFTTPDLRNKLLFTLGIIVIFRLGSFIPSPGIDYTKVQECVASPQLNSGGFAMINLFSG 66
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y ++++G A+
Sbjct: 67 GALLQLSIFALGIMPYITASIIVQLLRVVIPRFEALHKEGASGQAKLTQYTRYLTIGLAV 126
Query: 137 LEAVIVACYSLPYSIYAASHSVKHVMVT---------AFLLVCGAMTMSWICDTISESGF 187
L + + +++ ++V L G + W+ + I+E G
Sbjct: 127 LNSTTLVATVESGALFGNIQGCTDLIVNNEWWGLAILVLTLTAGTGLIMWLGEQITEHGV 186
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G G S++I + + + +L +LS+ + L ++ V ++ V V + R
Sbjct: 187 GNGMSILIFTSVASAFPSSLGAILSE------QGIDVFLIVIAVGLVLVALVVFVEQSQR 240
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
++ +QY A YIP +N +G+ PV+ + +L PS++A P
Sbjct: 241 RIPVQY-----AKRMVGRRMFGGTSTYIPIKVNMAGVIPVIFASSVLYLPSLIAQFF-DP 294
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPN 365
V E +N + G P +Y YA V F+ F +A P+E+AD + K G IP
Sbjct: 295 QTGWV-EWINTYFTRGDHP-IYIAAYAVLVIFFSYFYVAITFNPEEVADNMKKYGGFIPG 352
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++ G+ T +YL+ + + F G L L+ +A ++ L N+ F G TS+LIIVG
Sbjct: 353 IRAGRPTADYLSFVLSRINFPGSLYLAFVALIP-LIALVLINANQNFPFGGTSLLIIVGV 411
Query: 426 IIELRRSYQA 435
+E + A
Sbjct: 412 GLETVKQIDA 421
>gi|407793910|ref|ZP_11140940.1| preprotein translocase subunit SecY [Idiomarina xiamenensis 10-D-4]
gi|407213763|gb|EKE83616.1| preprotein translocase subunit SecY [Idiomarina xiamenensis 10-D-4]
Length = 442
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 193/418 (46%), Gaps = 18/418 (4%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
SE++RRL I++ R G F+P+PG D ++ Q + V F GA + S
Sbjct: 16 SELKRRLLFVLGAIIVFRAGSFVPVPGVDTAVLAQLFEQQKDTIVAMFNMFSGGALERAS 75
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
LGI P I ASI+MQ+ +VPSL +L+KEG G KI Y W +L A +++ +A
Sbjct: 76 ILALGIMPYISASIIMQLASVVVPSLAELKKEGEAGRRKISQYTRWGTLILATFQSIGIA 135
Query: 144 C---YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+P + V + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 136 TGLPNFMPGLVIDPGFGFYFTAVVS--LVTGTMFLMWLGEQITERGIGNGISILIFVGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + Q + +L + + VT + V V G R++ + Y A
Sbjct: 194 AGLPSAIGQTAEQARQGDLNVLLLLL-IGVIVVAVTYFVVFVERGQRRIVVNY-----AK 247
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
+ ++P +N +G+ P + + ++ FPS +AS +GS +
Sbjct: 248 RQQGRKVFAAQSTHLPLKVNMAGVIPPIFASSIILFPSTIASSVGSGDGMFADILQQISM 307
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTK 378
+V +Y +YA + F F A + P++ AD L K GA IP ++PG+ T Y+ K
Sbjct: 308 TVSPGQPLYALLYAAAIIFFCFFYTALVFNPRDTADNLKKSGAFIPGIRPGEQTSRYIDK 367
Query: 379 IQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ G L ++ + I + + N F G TS+LIIV I++ Q +
Sbjct: 368 VMTRLTLAGALYITFVC---LIPEFMMIGWNVPFYFGGTSLLIIVVVIMDFMAQVQTH 422
>gi|373463270|ref|ZP_09554897.1| preprotein translocase, SecY subunit [Lactobacillus kisonensis
F0435]
gi|371764958|gb|EHO53323.1| preprotein translocase, SecY subunit [Lactobacillus kisonensis
F0435]
Length = 438
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 216/437 (49%), Gaps = 34/437 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ A +F EIR ++ T ++VI R+G +I +PG + + + Q S SG V L
Sbjct: 1 MLSTLAGAFKVKEIRNKILFTLFVLVIFRLGAYITVPGINAKAL-QSVAS--SGLVSILN 57
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
F G S F +G+SP I A I++Q+L IVP V+ K+G G K+ + +++
Sbjct: 58 TFSGGGLTNYSIFAMGVSPYITAQIIIQLLQMDIVPRYVEWGKQGEVGRRKLNQHTRYLT 117
Query: 132 LGFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+ A ++V I A ++ S+ ++ S+K ++ +L G M +W+ D I+E G G
Sbjct: 118 VILAFFQSVGITAGFNQLSSLNLVNNPSIKTFVIIGLILTGGTMLTTWMGDMITERGIGN 177
Query: 190 GSSLIICVGILTGYTETLYKMLSQ----LLGSSVRWWP--FMLGLLGVFTIVTMWAVVVT 243
G S+II GI+ L + Q + GS + W P F + LL + + + V
Sbjct: 178 GISMIIFAGIVARIPVGLQSLWQQYFVGVTGSDL-WQPILFAIALLIIVLAIVTFVTWVQ 236
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILAS 302
+ R+V +QY + S + + S Y+P +N +G+ PV+ + +A P +IL +
Sbjct: 237 QAERRVPIQYT--RRVSGSPDSS-------YLPLKVNVAGVIPVIFASSFIATPQTILMA 287
Query: 303 ILG----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNK 358
+ ++Q + + N +T GA +YTI F F N P+++++ L K
Sbjct: 288 FTNYYSTATWFQILNNVFNMQTPTGA---AFYTILIIMFTFFYAFVQVN-PEKLSENLQK 343
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
G+ IP V PG T Y++ + G L L +++ I + L ++E +G TS
Sbjct: 344 QGSYIPGVWPGHETQSYVSTLLMKLSTVGALFLGVISLIPLIAQN-LWNLDESIGLGGTS 402
Query: 419 VLIIVGSIIELRRSYQA 435
+LI+VG IE R +
Sbjct: 403 LLIVVGVAIETIRQIRG 419
>gi|237653976|ref|YP_002890290.1| preprotein translocase subunit SecY [Thauera sp. MZ1T]
gi|237625223|gb|ACR01913.1| preprotein translocase, SecY subunit [Thauera sp. MZ1T]
Length = 441
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 200/421 (47%), Gaps = 27/421 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG--SVDELGDFGAELKLS 83
+++RRL +++ RIG IP+PG D + + + + S G V L GA + +
Sbjct: 15 GDLKRRLLFLVGALIVYRIGAHIPVPGIDPQGLAELFQSQQGGILGVFNLFSGGALSRFT 74
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI+MQ++ VPSL L+KEG G KI Y + +L A+ +A+ +A
Sbjct: 75 IFALGIMPYISASIIMQLMTVAVPSLEALKKEGEAGRRKITQYTRYGTLVLALAQALGIA 134
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
+ + VT LV G M + W+ + I+E G G G S+II GI+ G
Sbjct: 135 IALEGQAGLVLEPGLMFRFVTVATLVTGTMFLMWLGEQITERGIGNGISMIIFAGIIAGL 194
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLASAA 262
+ + + ++ PF + + + VT + V V G RK+ + Y ++ +
Sbjct: 195 PAAIGGLFELVRTGAMH--PFTALFICILVVLVTAFVVFVERGQRKILVNYAKRQVGNKV 252
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP---FW-QHVKEILNP 318
++P +N SG+ P + + ++ FP+ L GS +W + + L+P
Sbjct: 253 YGGQ-----SSHLPLKLNMSGVIPPIFASSIILFPATLGQWFGSSEGMYWLRDIASTLSP 307
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYL 376
+P +Y +YA + F F A + +E AD L K GA +P ++PG T Y+
Sbjct: 308 -----GQP-IYVMLYAVAIVFFCFFYTALVFNARETADNLKKSGAFVPGIRPGDQTARYI 361
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
KI G + ++++ +L +L + N F G TS+LI+V ++ QA
Sbjct: 362 DKILMRLTLAGAIYITLVC----LLPEFLILKWNVPFYFGGTSLLILVVVTMDFMAQVQA 417
Query: 436 Y 436
+
Sbjct: 418 F 418
>gi|419798092|ref|ZP_14323527.1| preprotein translocase, SecY subunit, partial [Neisseria sicca
VK64]
gi|385696101|gb|EIG26613.1| preprotein translocase, SecY subunit, partial [Neisseria sicca
VK64]
Length = 413
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 204/407 (50%), Gaps = 28/407 (6%)
Query: 27 EIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
++++RL F+ LIV RIG IP+PG D + + Y S +G + L F G+ + S
Sbjct: 15 DLKKRLTFLLGALIVF-RIGAHIPVPGVDAVALAKLYESAGNGILGMLNMFSGGSLERFS 73
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F +GI P I ASI++Q+ I+PSL L+KEG G + I Y + ++ AIL++ VA
Sbjct: 74 IFAIGIMPYISASIIVQLASEIIPSLKALKKEGEAGRKVITKYTRYGTVLLAILQSFGVA 133
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
+ + ++S++ + T LV G M + W+ + I+E G G G SLII GI G
Sbjct: 134 TFVFQQGV-VVTNSLEFHISTVVSLVTGTMFLMWLGEQITERGIGNGISLIITAGIAAGI 192
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAA 262
+ ++L+ S+ + ++G ++ + VV E RKV + Y ++ S
Sbjct: 193 PSGIARLLALTSQGSIGMPTAVSIVIGALLLI--YIVVYFESAQRKVPVHYAKRQVGSGV 250
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEILNP 318
+ S ++PF +N +G+ P + + ++ FPS L S GS + +L
Sbjct: 251 MQGS-----NTHMPFKLNMAGVIPPIFASSIILFPSTLLSWFGSNDTGSLLHKIAGLLQH 305
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYL 376
+ +Y ++ + F F A + PKE+A+ L K GA +P ++PGK T +YL
Sbjct: 306 GQA------LYILLFTVTIIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGKQTSQYL 359
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
++ +G L ++ T I + +N F +G TS+LI+V
Sbjct: 360 EQVVLRLTLFGALYIT---TICLIPEFLTTALNVPFYLGGTSLLILV 403
>gi|389580473|ref|ZP_10170500.1| preprotein translocase, SecY subunit [Desulfobacter postgatei 2ac9]
gi|389402108|gb|EIM64330.1| preprotein translocase, SecY subunit [Desulfobacter postgatei 2ac9]
Length = 439
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 216/449 (48%), Gaps = 31/449 (6%)
Query: 15 VLNNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
++ N+ ++ K E++R++ +T L+ + R+G +P PG D + + + + SG++ +
Sbjct: 1 MIQNSYQNMLKLPELKRKILITLALLFVYRVGVHVPTPGIDGAAL-ESFFASASGTLFSM 59
Query: 74 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ GA +LS F LGI P I ASI+++++ ++P L QL+KEG G +K +
Sbjct: 60 FNMFSGGALERLSIFALGIMPYISASIILELMTVVIPYLEQLKKEGDAGRKKKTQLTRYG 119
Query: 131 SL------GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFL-LVCGAMTMSWICDTIS 183
++ GF I AV + + P I + + A + L G + W+ + I+
Sbjct: 120 TVVLSAIQGFGI--AVGLESMTSPAGIPIVPYPGWGFRLMAIITLTAGTAFIMWLGEQIT 177
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 243
E G G G SLII GI+ +M +LL S+ F + +L V + + A++
Sbjct: 178 ERGIGNGISLIIFAGIVANMPSAAIQM-GRLL-STGEMGLFSIIILIVLMVAVIGAIIFM 235
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
E ++ +Y ++ + ++P IN SG+ P + + ++ FP+ LA
Sbjct: 236 ELAQRRIPVHYAKRVVGRKMYGGQTS----HLPLKINTSGVIPPIFASSIIMFPTTLAQF 291
Query: 304 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGA 361
+ P Q V + +P T W YY +Y F+ F F A P ++A+ + K G
Sbjct: 292 INLPVMQTVAGMFSPGTI-----W-YYLLYVGFIVFFCFFYTAVQFNPDDVAENMKKNGG 345
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
IP ++PGK T EY+ K+ G +S++ T+L + + N F G T++LI
Sbjct: 346 YIPGIRPGKRTSEYIDKVLTRITVGGAAYVSVVCVLPTVL---MDKFNVPFYFGGTALLI 402
Query: 422 IVGSIIELRRSYQAYNVMPSLSKALRRYG 450
+VG I+ +++ + + L R G
Sbjct: 403 VVGVAIDTISQIESHLITSNYDGFLGRSG 431
>gi|416840572|ref|ZP_11903819.1| preprotein translocase subunit SecY [Staphylococcus aureus O11]
gi|416846696|ref|ZP_11906685.1| preprotein translocase subunit SecY [Staphylococcus aureus O46]
gi|418895881|ref|ZP_13449959.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418929673|ref|ZP_13483525.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1750]
gi|421149828|ref|ZP_15609485.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|323440090|gb|EGA97805.1| preprotein translocase subunit SecY [Staphylococcus aureus O11]
gi|323442764|gb|EGB00390.1| preprotein translocase subunit SecY [Staphylococcus aureus O46]
gi|377718673|gb|EHT42844.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377763750|gb|EHT87604.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|394330003|gb|EJE56100.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus str. Newbould 305]
Length = 407
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 206/408 (50%), Gaps = 24/408 (5%)
Query: 38 LIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--AELKLSFFQLGISPQIVA 95
++VI +IG +IP PG + D G+ + L FG A + S F +GI P I A
Sbjct: 1 MLVIFKIGTYIPAPGVNPAAF--DNPQGSQGATELLNTFGGGALKRFSIFAMGIVPYITA 58
Query: 96 SILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYA- 153
SI+MQ+L IVP + K+G G K+ + ++++ A ++++ +A Y A
Sbjct: 59 SIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGAL 118
Query: 154 -ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKM-L 211
+ S+ ++ A +L G + W+ D I++ G G G S+II GIL+ +L +
Sbjct: 119 IINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQFGQ 178
Query: 212 SQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPI 268
+ +G +S+ W +LGLL ++T+ A+ V E RK+ +QY K +A R S
Sbjct: 179 TAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAVRKIPIQYA--KKQTAQRLGSQA 235
Query: 269 TEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QHVKEILNPETSVGARPW 327
T Y+P +N +G+ PV+ P L W Q++ NP ++VG
Sbjct: 236 T----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMV-- 289
Query: 328 VYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWG 387
VY + F + + + P+++AD L K G+ +P ++PG+ T +Y+TK+ F G
Sbjct: 290 VYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVG 347
Query: 388 GLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
+ L++++ + ++ + + IG TS+LI++G IE +S +A
Sbjct: 348 SIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGVAIETMKSLEA 394
>gi|295838424|ref|ZP_06825357.1| preprotein translocase, SecY subunit [Streptomyces sp. SPB74]
gi|197695778|gb|EDY42711.1| preprotein translocase, SecY subunit [Streptomyces sp. SPB74]
Length = 437
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 212/438 (48%), Gaps = 30/438 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSG--SV 70
+L A +F ++R++L T +IVI R+G +P+PG + + + + + SG +
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVIYRLGTHVPIPGVNYKNVQTCIEQANTNSGLFGL 60
Query: 71 DELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
L GA L+++ F LGI P I +SI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNLFSGGALLQITIFALGILPYITSSIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYL 120
Query: 131 SLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDT 181
++ A+L+ + + +I+ S+ +V + G T+ W+ +
Sbjct: 121 TVALAVLQGTGLVATARSGAIFQGCSVAGDIVPDQSIFTTIVMVLTMTAGTATVMWLGEL 180
Query: 182 ISESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 239
+++ G G G S+++ V I G+ +L+ K L G + + ++ V I+
Sbjct: 181 VTDRGIGNGMSILMFVSIAAGFPGSLWAIKKGGDLAGGWIEFGTVII----VGLIMVALV 236
Query: 240 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V V + R++ +QY + + + YIP +N +G+ PV+ + LL P++
Sbjct: 237 VFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPAL 291
Query: 300 LASILGSPF-WQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLN 357
+ S W +++ L +TS +Y+ + FF F + I+ P+E+AD +
Sbjct: 292 IVQFTDSQASWATWIRDNL-ADTSAWPHVVLYFLLIVFFAFFY--VAISFNPEEVADNMK 348
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++ G+ T EYL+ + + G L L ++A T+ N F G T
Sbjct: 349 KYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTLALAGFGA-NSNFPFGGT 407
Query: 418 SVLIIVGSIIELRRSYQA 435
S+LIIVG +E + ++
Sbjct: 408 SILIIVGVGLETVKQIES 425
>gi|395772113|ref|ZP_10452628.1| preprotein translocase subunit SecY [Streptomyces acidiscabies
84-104]
Length = 437
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 212/436 (48%), Gaps = 26/436 (5%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T ++V R+G +P+PG D + + Q + SG+ G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIVVAYRVGTHVPIPGVDYKSV-QQCVDEASGNQSLFG 59
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LINMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGSAGTAKITQYTRY 119
Query: 130 ISLGFAILEAVIVACYSLPYSIYA----ASHSV--KHVMVTAFLLVC---GAMTMSWICD 180
+++ AIL+ + + S+++ AS+ V + + T +++C G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGSLFSGCSVASNIVPDRDIFSTIVMVICMTAGTALVMWLGE 179
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I++ G G G S+++ + I + L+ + Q G+ W ++ V ++ V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWGIKKQ--GTLAGGWIEFGTVIAVGLVMVGLVV 237
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 292
Query: 301 ASILGSPF-WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKM 359
S W +T+ +Y+ + FF F + I+ P+E+AD + K
Sbjct: 293 VQFSNSQAEWATWVTRNLADTAAPVHIALYFLLIVFFAFFY--VAISFNPEEVADNMKKY 350
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G TS+
Sbjct: 351 GGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGA-NQNFPFGGTSI 409
Query: 420 LIIVGSIIELRRSYQA 435
LIIVG +E + ++
Sbjct: 410 LIIVGVGLETVKQIES 425
>gi|392553721|ref|ZP_10300858.1| preprotein translocase subunit SecY [Pseudoalteromonas spongiae
UST010723-006]
Length = 442
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 200/429 (46%), Gaps = 40/429 (9%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
+E++RRL I+I R+G F+P+PG D ++ Q + G++ E+ + GA +
Sbjct: 16 AELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLAQ-FFEQQKGTIVEMFNMFSGGALERA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI+MQ++ H+ P+ ++L+KEG G +KI + + +L A +++ +
Sbjct: 75 SVLALGIMPYITASIIMQLMTHMHPTYMELKKEGEQGRKKISQHTRYATLVLATFQSIGI 134
Query: 143 ACYSLP--YSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A SLP S + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-SLPNMMSGLVVNPGLAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRW------WPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY 253
L +GS+ P +L L+ V + VV E G R++ + Y
Sbjct: 194 AN--------LPSAIGSTAEMARQGDLQPLVLLLIAVIVFAVTYLVVFFERGQRRIVVNY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SP 307
A + ++P +N +G+ P + + ++ FP +AS G +
Sbjct: 246 -----AKRQQGRQVFAAQSSHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVAD 300
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVK 367
Q + L+P + A I+ F + +F+ P+E AD L K GA IP ++
Sbjct: 301 TLQTISLALSPGQPLYAMVLAAAIIFFCFFYTALVFN----PRETADNLKKSGAFIPGIR 356
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PG+ T +Y+ K+ G L ++ + + + F G TS+LIIV I+
Sbjct: 357 PGEQTSKYIDKVMTRLTLAGALYITFICLVPEFMTMAWQ---TPFYFGGTSILIIVVVIM 413
Query: 428 ELRRSYQAY 436
+ Q +
Sbjct: 414 DFMAQVQTH 422
>gi|330718953|ref|ZP_08313553.1| preprotein translocase subunit SecY [Leuconostoc fallax KCTC 3537]
Length = 444
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 214/438 (48%), Gaps = 39/438 (8%)
Query: 12 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV-SGSV 70
LS++ N E +IR++L T +++ + RIG I +PG D P + SG +
Sbjct: 2 LSTLFNAVREK----DIRKKLGWTFLILFVYRIGTHITVPGVD----PAALTNMANSGLM 53
Query: 71 DELGDF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYI 127
+ L F G + S F +G+SP + A I++Q+L IVP V+ K+G G K+ +
Sbjct: 54 NILNIFSGGGLMNYSLFAMGVSPYVTAQIVVQLLQLDIVPRFVEWSKQGEVGRRKLNNAT 113
Query: 128 WWISLGFAILEAV-IVACYSL--PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
W++L A +++V I A ++ Y + + ++S+ ++ ++ G M W+ + I+E
Sbjct: 114 RWLTLVLAFVQSVGITAGFNSLSAYGLVSQTNSLSSFVIIGSVMTIGTMFAVWLGEMITE 173
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLL-----GSSVRWWPFMLGLLGVFTIVTMWA 239
G G G S++I GI++ LY++ + + V W FM+ LL +V
Sbjct: 174 KGLGNGVSMVIFAGIISQVPSGLYELFKENILEASANEKVNGWVFMIVLLIAIVLVIAIV 233
Query: 240 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
E R++++QY SAA S E Y+P +N SG+ PV+ + ++ P
Sbjct: 234 TWFYEATRRLQMQY----TRSAAAYGS-----EAYLPLKVNVSGVIPVIFASSFISTPQT 284
Query: 300 L----ASILGSPFWQHVKEILNPETSV-GARPWVYYTIYAFFVFLFNIFDIANLPKEIAD 354
+ S W V + L T+V GA + YT+ F F N P++++D
Sbjct: 285 VLFAFQDKYSSAGWYQVMQQLFSMTTVPGA---ILYTVLIIVFTYFYAFVQVN-PEKLSD 340
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 414
L K GA I +++PGK T +++++ + F G L L +A I + +NE +
Sbjct: 341 NLQKQGAYIVSIRPGKETKAFVSQLLLNLSFVGSLFLGFVALVPLIAGD-IWGLNERIGL 399
Query: 415 GFTSVLIIVGSIIELRRS 432
G TS+LI +G ++L R
Sbjct: 400 GGTSLLITIGVALDLIRQ 417
>gi|288904293|ref|YP_003429514.1| preprotein translocase subunit SecY [Streptococcus gallolyticus
UCN34]
gi|306830322|ref|ZP_07463493.1| preprotein translocase subunit SecY [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|325977272|ref|YP_004286988.1| preprotein translocase subunit SecY [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|386336759|ref|YP_006032928.1| preprotein translocase subunit SecY [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
gi|288731018|emb|CBI12562.1| preprotein translocase, SecY subunit [Streptococcus gallolyticus
UCN34]
gi|304427569|gb|EFM30670.1| preprotein translocase subunit SecY [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|325177200|emb|CBZ47244.1| secY [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|334279395|dbj|BAK26969.1| preprotein translocase SecY subunit [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
Length = 434
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 218/435 (50%), Gaps = 53/435 (12%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 79
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG + + +F
Sbjct: 14 NVRNKIFFTLFIILVFRIGTHITVPGINAKSLEQLGELPFLNMLNLVSG--NAMSNF--- 68
Query: 80 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 69 ---SVFSMGVSPYITASIIVQLLQMDILPKFVEWSKQGEVGRRKLNQATRYISLVLAFVQ 125
Query: 139 AV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++ I A ++ SI ++ +VK ++ LL G+M ++W+ + I++ GFG G S+II
Sbjct: 126 SIGITAGFNTLSSISLVSTPNVKTYLLIGALLTTGSMIVTWLGEQITDKGFGNGVSMIIF 185
Query: 197 VGILT---GYTETLYKML------SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
GI++ T+Y+ S LL S + F+ L+ + + V +
Sbjct: 186 AGIISSIPNAISTIYEDFFVNVRSSDLLSS----YIFVALLIVAVLAIVFFTTFVQQAEY 241
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 306
K+ +QY KL A S Y+P INP+G+ PV+ + + PS + ++ +
Sbjct: 242 KIPIQYT--KLVQGAPTSS-------YLPLKINPAGVIPVIFASSITTIPSTIIPLISNG 292
Query: 307 ---PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGA 361
P+ ++ LN +T G +YA + LF+ F + P++ A+ L K +
Sbjct: 293 KDIPWLTTLESFLNYQTPSG------MVVYAVLIILFSFFYTFVQVNPEKTAENLQKGAS 346
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
IP+V+PG+ T EY++ + G + L+ ++ + I + ++ ++G TS+LI
Sbjct: 347 YIPSVRPGRETEEYMSSLLKKLATVGSIFLAFISLTPIIAQQAM-NLSSSIALGGTSLLI 405
Query: 422 IVGSIIELRRSYQAY 436
++ + IE + + Y
Sbjct: 406 LISTGIEGMKQLEGY 420
>gi|445421863|ref|ZP_21436168.1| preprotein translocase, SecY subunit [Acinetobacter sp. WC-743]
gi|444757133|gb|ELW81664.1| preprotein translocase, SecY subunit [Acinetobacter sp. WC-743]
Length = 440
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 203/427 (47%), Gaps = 32/427 (7%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR +F+ L+V R+G IPLPG D + + F + LG F GA
Sbjct: 11 YREIIRRLMFLIGALVVF-RLGAHIPLPGIDNVALER---FFKANEGTFLGLFNMFSGGA 66
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y + +L A+++
Sbjct: 67 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRYGTLLLALVQ 126
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
I C L + + + LV G M + W+ + I+E G G G S+II G
Sbjct: 127 G-IGMCAGLISQGITLTSGLAFYVPALTSLVAGTMFLMWLGEQITERGVGNGISMIIFAG 185
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGC-RKVKLQYYG 255
I+ G L ++ Q S ++GL G+ ++ + A+V E R++ + Y
Sbjct: 186 IVAG----LPNLVIQAFTSVDNGQSSLIGLAVFGLLSVAVLAAIVFIEKAQRRIPVNY-- 239
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS--PFWQHVK 313
A + T + ++P IN +G+ P + + LL FP+ L LGS P VK
Sbjct: 240 ---AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGIVK 296
Query: 314 EILNPETSV--GARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 369
L V +P +Y ++ + F F A + PKE+++ L + GA +P ++PG
Sbjct: 297 RSLQDLALVLSPGQP-LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPG 355
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
+ T YL I F G + ++++ IL F +G TS+LI+V +++
Sbjct: 356 EQTARYLDHILNRLTFIGAIYITVICLMPMILQ---SSFGIPFHLGGTSLLIVVVVVMDF 412
Query: 430 RRSYQAY 436
QA+
Sbjct: 413 MAQLQAH 419
>gi|365860344|ref|ZP_09400157.1| preprotein translocase subunit SecY [Streptomyces sp. W007]
gi|364010196|gb|EHM31123.1| preprotein translocase subunit SecY [Streptomyces sp. W007]
Length = 437
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 200/432 (46%), Gaps = 28/432 (6%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
A +F ++R++L T +IVI R+G +P PG D + Q SG + L
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVIYRLGAHVPAPGVDYTKVQQCIDQADSGGLLGLMQMFSG 65
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ A+
Sbjct: 66 GALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALAV 125
Query: 137 LEAVIVACYSLPYSIY---------AASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
L+ + + +++ A SV ++ + G + W+ + I++ G
Sbjct: 126 LQGTGLVATARSGALFQNCSVGSQIVADKSVFTTIIMVLTMTAGTAAVMWLGELITDRGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKML-SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G S+++ + I + L+ + S L W F +L F +V + V V +
Sbjct: 186 GNGMSILMFISIAATFPGALWAIKESGKLADG--WIEFGTVILIGFVMVGL-VVFVEQAQ 242
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R++ +QY + + + YIP +N +G+ PV+ + LL P+++ S
Sbjct: 243 RRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIVQFSNS 297
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKMGARI 363
Q + VG Y Y + F F +A N P E+AD + K G I
Sbjct: 298 ---QAGWATWITDNFVGQNEPYYMVAYFLLIVFFAFFYVAISFN-PDEVADNMKKYGGFI 353
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++ G+ T EYL+ + + G L L+++A T+ N F G TS+LIIV
Sbjct: 354 PGIRAGRPTAEYLSYVLNRITWPGSLYLALIALVPTMALAGFGGANANFPFGGTSILIIV 413
Query: 424 GSIIELRRSYQA 435
G +E + ++
Sbjct: 414 GVGLETVKQIES 425
>gi|218135261|ref|ZP_03464065.1| hypothetical protein BACPEC_03166 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990646|gb|EEC56657.1| preprotein translocase, SecY subunit [[Bacteroides] pectinophilus
ATCC 43243]
Length = 441
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 205/431 (47%), Gaps = 37/431 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
EIR +L T +IVI RIG +P+PG D +Y S + V++L G+ +
Sbjct: 13 EIRNKLLYTFAMIVIMRIGSLVPIPGVD-----TEYFSTLLNKVEDLSLLDAFTGGSFER 67
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F L I+P I +SI++Q+L +P L +++KEG DG K+ + ++++G A+++++
Sbjct: 68 MSVFALSITPYITSSIIIQLLTIAIPKLEEMQKEGEDGRRKMAAITRYVTVGLALIQSIA 127
Query: 142 VAC------YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+A Y + H V ++V L G+ + WI + I+E+G G G S+++
Sbjct: 128 MAVGFGKQGLIAGYKGMSTVHYVASIIVVIATLTAGSAILMWIGERITENGVGNGISIVL 187
Query: 196 CVGILTGYTETLYKMLSQLLG--SSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
V I++ E + + Q + S + +L + + + + +G R+++++Y
Sbjct: 188 LVNIISSIPEDMVVLFEQFVKPQSIAKGVLAAAIILAILVALVAFICFLQDGERRIEVRY 247
Query: 254 YGFKLASAAR---EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
K+ A + + T IP +N +G+ P++ + L+ FP IL + + Q
Sbjct: 248 AN-KINGAGKLPYQGGRTTN----IPLKVNTAGVMPIIFASSLMQFPVILVQLFSTK--Q 300
Query: 311 HV-KEILNPETSVGARPWVY---YTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
H L+ W Y +Y + +F F I P EIA+ L + IP
Sbjct: 301 HEWTRYLSSSYWCRTSDWKYSIGLLVYLILIVVFAYFYTSITFNPLEIANNLRRQSGVIP 360
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
+ PGK T +YL ++ G + L ++A + N S G TS++IIVG
Sbjct: 361 GINPGKPTSDYLNRVLNYIVLIGAVFLMVVALVPILCSGLF---NASVSFGGTSIIIIVG 417
Query: 425 SIIELRRSYQA 435
++E + ++
Sbjct: 418 VVLETAKQIES 428
>gi|357039729|ref|ZP_09101521.1| preprotein translocase, SecY subunit [Desulfotomaculum gibsoniae
DSM 7213]
gi|355357535|gb|EHG05308.1| preprotein translocase, SecY subunit [Desulfotomaculum gibsoniae
DSM 7213]
Length = 425
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 210/443 (47%), Gaps = 38/443 (8%)
Query: 12 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVS 67
++ +L+ +F SE+R +L T +I I R+G IP+PG D R LI +
Sbjct: 1 MAQLLDGLKGAFKVSELRTKLLFTLSMIFIFRVGAHIPVPGVDVDAFRELIGTA--GIIL 58
Query: 68 GSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 127
G D + GA S F + I P I ASI+MQ+L ++P L +L KEG +G +KI Y
Sbjct: 59 GFFDVISG-GAFKSFSVFAMSIIPYINASIIMQLLTVVIPHLERLAKEGEEGRKKITQYT 117
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
+ ++ A L+A+ ++ Y + + + ++ F L G + WI + I+E G
Sbjct: 118 RYFTVMLAFLQAIGMSVMMGNYGVLHNPGFISYAVIV-FTLTAGTTLLMWIGEQITERGI 176
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G G SL+I GI++ + + QL ++ ++ L+ + +V V V EG R
Sbjct: 177 GNGISLLIFAGIVSRLPSGIQNLYLQLEAGTINVLSLLI-LVVIGALVIAAVVAVQEGQR 235
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
++ +QY K R T ++P +N +G+ PV+ + LL FP +A
Sbjct: 236 RIPVQYA--KRVVGRRVYGGQTT---HLPLKVNQAGVIPVIFASSLLMFPEQIAR----- 285
Query: 308 FWQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGAR 362
W I E V W + +YA + F F A + P ++AD + K G
Sbjct: 286 -WFQGSAI--AEFYVNYFGWNSPAHTLVYALLIIGFTYFYTAVIMNPVDMADNIKKYGGF 342
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++PG+ T EY++++ + G + L+++A + R N F G T++LI+
Sbjct: 343 IPGIRPGRPTAEYISRVMSRITLAGAVFLALIAILPNFVLLATRIPNIYF--GGTALLIV 400
Query: 423 VGSIIE---------LRRSYQAY 436
VG ++ L RSYQ +
Sbjct: 401 VGVALDTMKQIESQLLMRSYQGF 423
>gi|312880352|ref|ZP_07740152.1| protein translocase subunit secY/sec61 alpha [Aminomonas
paucivorans DSM 12260]
gi|310783643|gb|EFQ24041.1| protein translocase subunit secY/sec61 alpha [Aminomonas
paucivorans DSM 12260]
Length = 430
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 215/440 (48%), Gaps = 26/440 (5%)
Query: 15 VLNNAAESFFKSEIRRR-LFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
++++ ++F +++RR LFV A L V R+G IP PG D + Q F G V
Sbjct: 1 MIDSFRDAFRLPDLKRRFLFVLAALFV-YRLGAHIPTPGIDPEAMAQ---LFEKGGVLGF 56
Query: 74 GDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
D GA + S F LG+ P I +SI+MQ+L +VP+L +++K+G +G +KI Y +
Sbjct: 57 FDLFAGGALRRFSIFALGVVPYINSSIVMQLLVVVVPTLEKMQKDGEEGRKKIVQYTRYG 116
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
++ FA+++AV + + I+A +V + G++ + W+ + +S+ G G G
Sbjct: 117 TVLFALIQAVGMTVWLGNLGIFAGGF--LDAVVVTVTVTAGSLAVMWLGEIMSDHGIGNG 174
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SL+I GI+ E + + S + + +L +L + ++ V++ EG RK+
Sbjct: 175 ISLLIFAGIVARIPEAIIQTFSLVRMGEMNVLVLLLAVLLMVGVIA-GCVLLQEGQRKLP 233
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
+QY A + +IP +N +G+ P++ + +L FP LA +
Sbjct: 234 VQY-----AKRVVGNRVYGGQSTFIPLRVNTAGVIPIIFASSVLLFPYTLAGFFPGSVAK 288
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKP 368
++ P + +Y +Y + F F A + P+E+A+ + K G I ++P
Sbjct: 289 AIQNAFAPSSP------IYMILYVGLIVFFAYFYTAVVFNPEEVANNMKKYGGFILGIRP 342
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
GK T +Y+ K+ + G L L+++A T + L IN F G TSVLI+VG ++
Sbjct: 343 GKPTSDYIEKVMSRITLGGSLALALVAVIPTFMSG-LMNINT-FYFGGTSVLIVVGVALD 400
Query: 429 LRRSYQAYNVMPSLSKALRR 448
+ +M L+R
Sbjct: 401 TVHQIEGQLLMRHYDGILKR 420
>gi|262047179|ref|ZP_06020137.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
MV-3A-US]
gi|293380396|ref|ZP_06626467.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
214-1]
gi|260572424|gb|EEX28986.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
MV-3A-US]
gi|290923079|gb|EFE00011.1| preprotein translocase, SecY subunit [Lactobacillus crispatus
214-1]
Length = 431
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 213/430 (49%), Gaps = 27/430 (6%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
S L NA F EIR +L+ T ++++ RI I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKLYFTLFILLLYRISANITVPGVNAKAITQVAQTGLVPMLDTV 59
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLAL 118
Query: 133 GFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFIQSIGITLGFNALTQMGLVKNQTPQTYIEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 245
S+II GI+ L+++ + + +S RW F + ++ IVT + V +
Sbjct: 179 ISVIIFAGIIARLPSGLWQIYKEEIINNSASDRWQGILFFIAVIVAILIVTQFVTWVEQA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASIL 304
R++ +QY + ++ E ++P +N SG+ PV+ + + P +IL +
Sbjct: 239 DRRIPIQY---------TRRATMSGSESFLPLKVNVSGVIPVIFASSFIVTPATILMAFQ 289
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGAR 362
+ Q +++N S+ P V IY + LF F + P+++A+ L K GA
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGV--IIYTLLIILFTFFYAFVQVNPEKLAENLQKQGAY 347
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP+V PGK T +Y++K+ G L L ++A + ++ + +G TS+LI+
Sbjct: 348 IPSVWPGKDTQDYISKMLMKLSTVGSLFLGLVALLPQLATNFW-NLPSSIGLGGTSLLIV 406
Query: 423 VGSIIELRRS 432
+G ++EL R
Sbjct: 407 IGVVLELSRQ 416
>gi|171778396|ref|ZP_02919575.1| hypothetical protein STRINF_00426 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|379704457|ref|YP_005202916.1| preprotein translocase subunit SecY [Streptococcus infantarius
subsp. infantarius CJ18]
gi|171282927|gb|EDT48351.1| preprotein translocase, SecY subunit [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|374681156|gb|AEZ61445.1| preprotein translocase, SecY subunit [Streptococcus infantarius
subsp. infantarius CJ18]
Length = 434
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 218/431 (50%), Gaps = 45/431 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 79
+R ++F T +I + R+G I +PG + + + Q + L+ VSG + + +F
Sbjct: 14 NVRNKIFFTLFIIFVFRVGTHITVPGINAKSLDQLGELPFLNMLNLVSG--NAMSNF--- 68
Query: 80 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 69 ---SVFSMGVSPYITASIIVQLLQMDILPKFVEWSKQGEVGRRKLNQATRYISLVLAFIQ 125
Query: 139 AV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++ I A ++ SI ++ +VK ++ LL G+M ++W+ + I++ GFG G S+II
Sbjct: 126 SIGITAGFNTLSSISLVSTPNVKSYILIGALLTTGSMIVTWLGEQIADKGFGNGVSMIIF 185
Query: 197 VGILT---GYTETLYKMLSQLLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
GI++ T+Y+ + SS + + F+ L+ + + V + K+ +
Sbjct: 186 AGIISSIPNAISTIYEDFFVNVRSSDLISSYIFVALLIVAVLAIVFFTTFVQQAEYKIPI 245
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----P 307
QY KL A S Y+P INP+G+ PV+ + + PS + ++ + P
Sbjct: 246 QYT--KLVQGAPTSS-------YLPLKINPAGVIPVIFASSITTIPSTIIPLISNGHDIP 296
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGARIPN 365
+ ++ LN +T +G IY+ + LF+ F + P++ A+ L K + IP+
Sbjct: 297 WLTTLESYLNYQTPIGM------VIYSVLIILFSFFYTFVQVNPEKTAENLQKGASYIPS 350
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
V+PG+ T EYL+ + G + L+ ++ + I + ++ ++G TS+LI++ +
Sbjct: 351 VRPGRETEEYLSSLLKKLATVGSIFLAFISLTPIIAQQAM-NLSSSIALGGTSLLILIST 409
Query: 426 IIELRRSYQAY 436
IE + + Y
Sbjct: 410 GIEGMKQLEGY 420
>gi|148270442|ref|YP_001244902.1| preprotein translocase subunit SecY [Thermotoga petrophila RKU-1]
gi|147735986|gb|ABQ47326.1| protein translocase subunit secY/sec61 alpha [Thermotoga petrophila
RKU-1]
Length = 431
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 215/432 (49%), Gaps = 36/432 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDE 72
+F E+R R+ T + +++ R+G +IP+PG + RR+ ++ + D
Sbjct: 7 NAFKIPELRDRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDV 66
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
GA + S F + ++P I ASI++Q+L ++PSL ++ +EG +G +K Y ++L
Sbjct: 67 FTG-GALSQFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAKYTRHLTL 125
Query: 133 GFAILEAVIVA---CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+A V+ S P I + ++ +++ ++ G M + W+ + I+E G G
Sbjct: 126 LIGGFQAFFVSFSLARSNPDMIAPGVNVLQFTILSTISMLAGTMFLLWLGERITEKGIGN 185
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFML--GLLGVFTIVTMWAVVVTEGCR 247
G S++I GI+ Y Y + L G ++ W F++ GL+ +F I ++V + R
Sbjct: 186 GISILIFAGIVARYPS--YIRQAYLGGLNLLEWIFLIAVGLITIFGI-----ILVQQAER 238
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
++ +QY A Y+P +N G+ P++ + +++ PS +ASI S
Sbjct: 239 RITIQY-----ARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNSG 293
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVK 367
Q++ + + V++ Y + V +F+ PKEI++ + K G IP ++
Sbjct: 294 TLQNLFKAGGFLYLLVYGLLVFFFTYFYSVVIFD-------PKEISENIQKYGGYIPGLR 346
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PG++T +YL ++ F GG+ L ++A ++ + ++N IG TS LI VG +
Sbjct: 347 PGRSTEQYLHRVLNRVTFIGGVFLVVIALLPYLIQGAI-KVN--VWIGGTSALIAVGVAL 403
Query: 428 ELRRSYQAYNVM 439
++ + + + VM
Sbjct: 404 DIIQQMETHMVM 415
>gi|453051855|gb|EME99351.1| preprotein translocase subunit SecY [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 438
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 208/440 (47%), Gaps = 43/440 (9%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-- 77
A +F ++R++L T ++V+ R+G +P+PG + Q+ + V + G FG
Sbjct: 6 ARAFKTPDLRKKLLFTLGIMVLYRLGSQVPIPGVNY----QNVQTCVDQAKSGQGLFGLV 61
Query: 78 ------AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
A L+++ F LG+ P I ASI++Q+L ++P L L+KEG G KI Y +++
Sbjct: 62 NMFSGGALLQITIFALGVMPYITASIILQLLTVVIPRLEALKKEGQSGQAKITQYTRYLT 121
Query: 132 LGFAILEAVIVACYSLPYSIYA---------ASHSVKHVMVTAFLLVCGAMTMSWICDTI 182
+ A+L+ + + +++ +HS+ + + G + W+ + +
Sbjct: 122 IALAVLQGTGLVAVARNGALFGNCPVASDIVPNHSIFTTITMVITMTAGTALIMWLGELV 181
Query: 183 SESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
++ G G G S+++ I + L+ K+ +L+G W F L +L +V + V
Sbjct: 182 TDRGIGNGMSILMFTSIAAQFPSALWAIKLQGKLMGG---WLEFGLVILCGLAMVGL-VV 237
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R+V +QY + + + YIP +N +G+ PV+ + LL P++L
Sbjct: 238 FVEQAQRRVPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALL 292
Query: 301 ASILGS--PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADY 355
S W + + G P +Y Y + F F +A N P+E+AD
Sbjct: 293 VQFTDSKDAGW---AQWIQANLVKGDHP-IYMVTYFLLIVFFAFFYVAISFN-PEEVADN 347
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
+ K G IP ++ G+ T EYL+ + + G L L ++A T+ L N+ F G
Sbjct: 348 MKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGVIALVPTVALVTLNA-NQNFPFG 406
Query: 416 FTSVLIIVGSIIELRRSYQA 435
TS+LIIVG +E + ++
Sbjct: 407 GTSILIIVGVGLETVKQIES 426
>gi|153816230|ref|ZP_01968898.1| hypothetical protein RUMTOR_02479 [Ruminococcus torques ATCC 27756]
gi|317501794|ref|ZP_07959980.1| preprotein translocase subunit secY [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088685|ref|ZP_08337595.1| preprotein translocase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336439568|ref|ZP_08619179.1| preprotein translocase [Lachnospiraceae bacterium 1_1_57FAA]
gi|145846413|gb|EDK23331.1| preprotein translocase, SecY subunit [Ruminococcus torques ATCC
27756]
gi|316896827|gb|EFV18912.1| preprotein translocase subunit secY [Lachnospiraceae bacterium
8_1_57FAA]
gi|330407208|gb|EGG86711.1| preprotein translocase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336015797|gb|EGN45599.1| preprotein translocase [Lachnospiraceae bacterium 1_1_57FAA]
Length = 450
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 213/451 (47%), Gaps = 26/451 (5%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L ++F +IR+R+F T V++VI R+G +P PG D I + + + +
Sbjct: 1 MLKTVRKAFQIEDIRKRIFYTFVMLVIVRLGSQLPTPGVDPTFIKEFFAQQTGDAFNFFE 60
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
F G+ S F L I+P I +SI+MQ+L +P L +++KEG +G +KI + ++++
Sbjct: 61 AFTGGSFTNFSIFALSITPYITSSIIMQLLTIAIPKLEEMQKEGEEGRKKIAAITRYVTV 120
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
A++E+ +A + + V +V L G+ M WI + I+E+G G G S
Sbjct: 121 ALALIESTAMAVGFGRQGLLEEYNFVSCAVVVC-TLTAGSAFMMWIGERITENGVGNGIS 179
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGCRKVK 250
+++ + I++ LY + + + + GL L V V ++ V++ G R++
Sbjct: 180 IVLLINIISRVPSDLYTLYEKFMSGKKLAQAGLAGLIILAVILAVVVFVVLLQSGERRIA 239
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
+QY + + +IP +N +G+ PV+ + L+ P ++A LG
Sbjct: 240 VQY-----SKKVQGRKTYGGQSTHIPLRVNTAGVIPVIFASSLMQTPIVIAQFLGKGNGT 294
Query: 311 HV-KEILNPETSVG----ARP------WVYYTIYAFFVFLFNIFDIANLPKEIADYLNKM 359
+ +IL S A+P VY + FF + + I P EIA+ + K
Sbjct: 295 GIGSQILAAMNSNNWCNPAKPVYTVGLLVYILLTIFFAYFYT--SITFNPLEIANNMKKS 352
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G +P ++PGK T+EYL KI F G L I+ + S G TS+
Sbjct: 353 GGFVPGIRPGKPTVEYLQKILNYIIFIGACGLIIVQVIPFFFNGMF---GANVSFGGTSL 409
Query: 420 LIIVGSIIELRRSYQAYNVMPSLSKALRRYG 450
+IIVG ++E + ++ ++ + + L G
Sbjct: 410 IIIVGVVLETIKKIESQMLVRNYTGFLNNKG 440
>gi|418465566|ref|ZP_13036500.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359755838|gb|EHK90000.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 441
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 206/434 (47%), Gaps = 28/434 (6%)
Query: 26 SEIRRRL-FVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
SE++ RL FV LIV RIG FIP+PG D ++ +D F GA +
Sbjct: 17 SELKSRLLFVLGALIVF-RIGSFIPVPGIDAVVLAHLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +LRKEG G KI Y + ++ A L+AV +
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRKEGESGRRKISKYTRYSTVVLATLQAVGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + + LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 ST-GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + + Q + +L + + VT + V V G R++K++Y A
Sbjct: 195 AGLPAAIGQTIEQARLGQMHLLVLLL-IAVIVLAVTYFVVFVERGQRRIKVEY-----AK 248
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEIL 316
+ + ++P +N +G+ P + + ++ FP+ L +G + + +L
Sbjct: 249 RQQGRQILGGHSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSILL 308
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
+P +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 309 HP-----GQP-LYLVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSR 362
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ KI GGL ++ + I+ N F G TS+LI+V I++ Q
Sbjct: 363 YIDKIMTRLTLIGGLYVTFVCLVPYIMTSAW---NVQFYFGGTSLLIVVVVIMDFIVQIQ 419
Query: 435 AYNVMPSLSKALRR 448
++ + AL++
Sbjct: 420 SHLMSTRYESALKK 433
>gi|308233877|ref|ZP_07664614.1| preprotein translocase, SecY subunit [Atopobium vaginae DSM 15829]
gi|328943585|ref|ZP_08241050.1| preprotein translocase subunit SecY [Atopobium vaginae DSM 15829]
gi|327491554|gb|EGF23328.1| preprotein translocase subunit SecY [Atopobium vaginae DSM 15829]
Length = 426
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 208/441 (47%), Gaps = 49/441 (11%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPG--FDRRLIPQDYLSFVSGSVDELGDF- 76
+ +F E+R ++F+T ++++ R G ++P PG F R L S SG+V L F
Sbjct: 6 SSAFRIKELRNKIFITVAILLLYRFGAYLPAPGVPFARMLQAFQEASAGSGAVAVLNLFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA ++S F LGI P I A I++Q+ ++PSL +L KEG G KI Y ++++ A
Sbjct: 66 GGALSRVSVFSLGIMPYITAQIILQMFQAVIPSLGELAKEGESGQRKITQYTRYLTVVLA 125
Query: 136 ILEAV----IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
++ A+ + Y + +S ++ ++ LLV GAM + W+ + I++ G G G
Sbjct: 126 LVNAIGYYFLFKSYGISFSNLGFPEYIEAFIIVGVLLV-GAMIIMWLGEVITQRGVGNGM 184
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT-------- 243
SLII I+ G L L SSV F + V T+VT+ ++
Sbjct: 185 SLIIFANIMAG--------LPSALTSSVNTSTFGM----VTTLVTLLVILAIIPIIIFIE 232
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
G R++ +QY A + Y+P +N +G+ P++ + LL P+ +A
Sbjct: 233 RGQRRIPVQY-----AKRVMGRRIMGGQSTYLPIKVNTAGVVPIIFASALLYMPAQVAVF 287
Query: 304 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGA 361
W ++ N S G WV + + + F F A + P E AD L K G
Sbjct: 288 FPRVDW--IQAFAN-SLSTG---WVNWVLSVVLIVFFAYFYTAMVFNPDETADQLKKAGG 341
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVL 420
+P V+PG AT Y+ + G L ++ +A +I+ + + + F G TSVL
Sbjct: 342 FVPGVRPGGATAAYIKDVLDHITLPGALFMAAIAVIPSIMFRFTGNTLLQAF--GGTSVL 399
Query: 421 IIVG----SIIELRRSYQAYN 437
I+VG +I +L + +N
Sbjct: 400 IMVGVAMDTISQLESQLKMHN 420
>gi|429748896|ref|ZP_19282054.1| preprotein translocase, SecY subunit [Capnocytophaga sp. oral taxon
332 str. F0381]
gi|429169586|gb|EKY11333.1| preprotein translocase, SecY subunit [Capnocytophaga sp. oral taxon
332 str. F0381]
Length = 448
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 203/427 (47%), Gaps = 28/427 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS--VDELGDF--GAELK 81
E++ R+ +T ++++ R G I LPG D + + S SG +D L F GA
Sbjct: 15 EELKNRIILTLGVLLVYRFGAHIVLPGIDSAQL-HELASRTSGGGLLDILNAFTGGAFSN 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
S F LGI P I ASI++Q++ +P L +L+KEG G KI W+++ +++A +
Sbjct: 74 ASIFALGIMPYISASIVVQLMGIAIPYLQKLQKEGESGRRKINQITRWLTIAICLVQAPV 133
Query: 142 ----VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ +P S + + ++ +LV G + W+ + I++ G G G SL+I V
Sbjct: 134 YLYGINRLGVPDSAFVLGKGLGFIVPAVIILVTGTIFAMWLGEKITDKGIGNGISLLIMV 193
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV------TEGCRKVKL 251
GI+ + ++ L +S GL+ + V +W V+V + R++ +
Sbjct: 194 GIIARFPRAFAAEVASRLTASNG------GLMLILIEVILWFVIVLLCIYLIKAVRQIPV 247
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
QY + + YIP +N +G+ P++ L+ P+ +A + S F ++
Sbjct: 248 QYARRTADGGVATEKNVFGARQYIPLRLNAAGVMPIIFAQALMFVPATVAGLSQSEFAKN 307
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA-NLP-KEIADYLNKMGARIPNVKPG 369
V+ + W Y ++A + LF F A +P ++AD L + G IP ++PG
Sbjct: 308 VQAAFSDIFGF----W-YNLLFAAMIILFTYFYTAITVPTNKMADDLKRSGGFIPGIRPG 362
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
K T +YL KI + G + ++++A ++L + G TS+LI+VG I+
Sbjct: 363 KETGDYLDKIMSLITLPGAIFIALVAIFPSMLKIIGMQDQWALFYGGTSLLILVGVAIDT 422
Query: 430 RRSYQAY 436
+ +Y
Sbjct: 423 MQQVNSY 429
>gi|406969051|gb|EKD93776.1| hypothetical protein ACD_28C00062G0002 [uncultured bacterium]
Length = 432
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 201/438 (45%), Gaps = 28/438 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L + + ++R+++ T ++V+ R+ I LPG + D L V LG
Sbjct: 1 MLKTLTQIWHAKDLRKKILFTLGIVVVFRLMTHITLPGVNL-----DALKVVFEQNKLLG 55
Query: 75 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
F G+ S +G+SP I ASI++Q++ + L + KEG +G KI Y W
Sbjct: 56 AFSLLTGGSAENFSIVLMGLSPYINASIIVQLMTVVSTKLESISKEGEEGRRKINRYTRW 115
Query: 130 ISLGFAILEA---VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
++L A L++ + + S P I + + ++ + G + + W+ + I+E G
Sbjct: 116 LALPLAFLQSYGMISLMNASAPIPIVENLNDLSVLLPLMITISTGTIVLMWLGELITEKG 175
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G S++I GI+ G L L+ + + P + +L V + +++TEG
Sbjct: 176 IGNGISILIFAGIMAGIPSLLASTLALTEQDNAKLIPLVATVLMTILFVVV-IILITEGQ 234
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R++ + Y G + + + +P IN +GM P++ ++ FPS++ L +
Sbjct: 235 RRIPITYAG--------QGKGLKGGDSNLPIRINQAGMIPIIFAVSVVTFPSVIGQFLIN 286
Query: 307 PFWQHVKEILNP-ETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARI 363
+ V+ + N T ++ +Y +Y + F F I +A+ + K G I
Sbjct: 287 AKSEWVQSVGNFFITYFQSQSLLYMVLYFLLIIGFTFFYVSITFNTDNVAENIQKRGGFI 346
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEG---FSIGFTSVL 420
P ++PGK T EYL + WGGL ++++A S I+ + G I ++
Sbjct: 347 PGIRPGKETSEYLKNVSNRLNLWGGLFIALVAVSPIIIQQVFQDFGTGGIPVIISGAGLI 406
Query: 421 IIVGSIIELRRSYQAYNV 438
I+VG +++L R A V
Sbjct: 407 IVVGVVLDLVRQVNAQMV 424
>gi|332533194|ref|ZP_08409061.1| preprotein translocase SecY subunit [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037273|gb|EGI73728.1| preprotein translocase SecY subunit [Pseudoalteromonas haloplanktis
ANT/505]
Length = 442
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 205/443 (46%), Gaps = 44/443 (9%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++RRL I+I R+G F+P+PG D ++ D+ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVL-ADFFEQQKGTIVEMFNMFSGGALERA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI+ Q+L H+ P ++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIITQLLTHMYPPFIELKKEGEQGRKKISQYTRYGTLVLATIQSIGI 134
Query: 143 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A SLP + + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-SLPGMMEGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWP------FMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY 253
L +GS+V F+L ++ V + VV E G R++ + Y
Sbjct: 194 AN--------LPSAIGSTVEMARQGDLNVFVLLMVAVIVFAVTYLVVFFERGQRRIVVNY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SP 307
A + ++P +N +G+ P + + ++ FP +AS G +
Sbjct: 246 -----AKRQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVAD 300
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPN 365
Q V L P +P +Y + A + F F A + P+E AD L K GA IP
Sbjct: 301 VLQAVATTLTP-----GQP-LYSLVLAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPG 354
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+ K+ G L ++ + + + F G TSVLIIV
Sbjct: 355 IRPGEQTSKYIDKVMTRLTLAGALYITFICLVPEFMTMAWQ---TPFYFGGTSVLIIVVV 411
Query: 426 IIELRRSYQAYNVMPSLSKALRR 448
I++ Q + + L++
Sbjct: 412 IMDFMAQVQTHLMSHQYDSVLKK 434
>gi|315453717|ref|YP_004073987.1| preprotein translocase subunit SecY [Helicobacter felis ATCC 49179]
gi|315132769|emb|CBY83397.1| preprotein translocase subunit SecY [Helicobacter felis ATCC 49179]
Length = 419
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 210/424 (49%), Gaps = 38/424 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-----AELK 81
I ++F+T + + R+ +IP+PG D I F S S + LG F A +
Sbjct: 4 AIATKIFITLGYLFLYRVLAYIPIPGVDLAAIKS---FFDSNSSNALGLFNMFSGNAVSR 60
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
LS LGI P I ASI+M++L P+L +++KE DG +K + + ++G I++A+
Sbjct: 61 LSIISLGIMPYITASIIMELLSATFPNLAKMKKE-RDGMQKYMQIVRYATIGITIIQAL- 118
Query: 142 VACYSLPYSIYAASH--------SVKHVMVTA-FLLVCGAMTMSWICDTISESGFGQGSS 192
S+ + + + H S++ ++ A F ++ G M + WI + I++ G G G S
Sbjct: 119 ----SVSFGLRSIGHGPNGAIMVSMQTFLILATFSMLTGTMLLMWIGEQITQRGVGNGIS 174
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKL 251
LII GI++G + + L+ + V ++G++ + + T++A++ E R++ +
Sbjct: 175 LIIFAGIVSGIPSAIAGTFN-LVNTGVINVLVLIGIIAI-VLATIFAIIYVELAERRIPI 232
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
Y A + + YIP +N SG+ P + + LL FPS + + Q
Sbjct: 233 SY-----ARKVMMQNQNKRIMNYIPIKLNLSGVIPPIFASALLVFPSTILQASSNKVLQA 287
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKA 371
+ + LNP A + + + FF + ++ I K+IAD L + G I ++PG+
Sbjct: 288 IADFLNPHGY--AYNILMFLLIIFFAYFYS--SIVFNAKDIADNLKRNGGFIAGLRPGEG 343
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +L + + FWG L L+I++T IL ++ + F G T+VLI+V I+ +
Sbjct: 344 TSNFLNTVASRLTFWGSLYLAIISTLPWIL---VKAMGVPFYFGGTAVLIVVQVAIDTMK 400
Query: 432 SYQA 435
+A
Sbjct: 401 KIEA 404
>gi|443242445|ref|YP_007375670.1| preprotein translocase secY subunit [Nonlabens dokdonensis DSW-6]
gi|442799844|gb|AGC75649.1| preprotein translocase secY subunit [Nonlabens dokdonensis DSW-6]
Length = 444
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 206/420 (49%), Gaps = 18/420 (4%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
E+R R+ +T L+++ R G I LPG D + +F G L F GA K S
Sbjct: 14 EELRDRIIMTLSLLLVYRFGAQITLPGIDSTQLVGLASNFKDGIGGILNAFTGGAFAKAS 73
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA---- 139
F LGI P I ASI++Q++ +P L +L+KEG G +KI W+++G +++A
Sbjct: 74 VFALGIMPYISASIVVQLMGIAIPYLQKLQKEGESGRKKINQITRWLTIGICLIQAPSYM 133
Query: 140 VIVACYSLPYSIY-AASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+ + +P S + ++++ +LV G + W+ + I++ G G G SL+I VG
Sbjct: 134 LSLKTLGVPDSAFMMQDQQTLFLVLSTIILVTGCVFAMWLGEKITDKGIGNGISLLIMVG 193
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ + + ++ + W+ ++ ++ ++ ++ V++ G RK+ +Q Y +
Sbjct: 194 IIATLPQAFIQEITSRVDGVGGWFLIIVEVV-IWLLIIAACVMLVMGVRKIPVQ-YARRS 251
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
A+ E + + YIP +N SG+ P++ ++ PS + I S W K I N
Sbjct: 252 ATGGYEKNAFGSRQ-YIPLKLNASGVMPIIFAQAIMFVPSAIGQIDAS--W--AKSIGNA 306
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIA-NLP-KEIADYLNKMGARIPNVKPGKATIEYL 376
T + + Y +A + +F F A +P ++AD L + G IP ++PG T EYL
Sbjct: 307 YTDIFG--FWYNLTFALLIIVFTYFYTAITVPTNKMADDLKRNGGFIPGIRPGTETSEYL 364
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+I + G L L+ +A ++ + + G TS+LI+VG I+ + +Y
Sbjct: 365 DRIMSQITLPGSLFLAAVAIFPALISLIGVQQSWALFYGGTSLLIMVGVAIDTMQQINSY 424
>gi|403050176|ref|ZP_10904660.1| preprotein translocase subunit SecY [Acinetobacter bereziniae LMG
1003]
Length = 452
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 203/427 (47%), Gaps = 32/427 (7%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR +F+ L+V R+G IPLPG D + + F + LG F GA
Sbjct: 23 YREIIRRLMFLIGALVVF-RLGAHIPLPGIDNVALER---FFKANEGTFLGLFNMFSGGA 78
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y + +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRYGTLLLALVQ 138
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
I C L + + + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 G-IGMCAGLISQGITLTSGLAFYVPALTSLVAGTMFLMWLGEQITERGVGNGISMIIFAG 197
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGC-RKVKLQYYG 255
I+ G L ++ Q S ++GL G+ ++ + A+V E R++ + Y
Sbjct: 198 IVAG----LPNLVIQAFTSVDNGQSSLIGLAVFGLLSVAVLAAIVFIEKAQRRIPVNY-- 251
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS--PFWQHVK 313
A + T + ++P IN +G+ P + + LL FP+ L LGS P VK
Sbjct: 252 ---AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGIVK 308
Query: 314 EILNPETSV--GARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 369
L V +P +Y ++ + F F A + PKE+++ L + GA +P ++PG
Sbjct: 309 RSLQDLALVLSPGQP-LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPG 367
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
+ T YL I F G + ++++ IL F +G TS+LI+V +++
Sbjct: 368 EQTARYLDHILNRLTFIGAIYITVICLMPMILQ---SSFGIPFHLGGTSLLIVVVVVMDF 424
Query: 430 RRSYQAY 436
QA+
Sbjct: 425 MAQLQAH 431
>gi|238922849|ref|YP_002936362.1| preprotein translocase subunit SecY [Eubacterium rectale ATCC
33656]
gi|238874521|gb|ACR74228.1| preprotein translocase subunit SecY [Eubacterium rectale ATCC
33656]
Length = 439
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 201/408 (49%), Gaps = 46/408 (11%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F ++R R+ T +++++ RIG +P+PG + Q +L+ S S D LG
Sbjct: 1 MLKTLRNAFKIKDVRNRILFTFMMLIVIRIGSELPIPGVKGSVF-QSWLN--SKSADGLG 57
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
G+ ++S F L I+P I +SI+MQ+L +P L +++++G DG +KI +
Sbjct: 58 FVDAITGGSFSQMSVFALNITPYITSSIIMQLLTIAIPKLEEMQRDGEDGRKKIVEITRY 117
Query: 130 ISLGFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
+++ +LE+V ++ Y Y +V V+ + L G+ + WI + I+E G
Sbjct: 118 LTIALGLLESVMMVIGFYRQNYLTEKTPLTVIMVVTS---LTAGSAVLMWIGERITEKGV 174
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRW-WPFMLGLLGVFTIVTM--WAVVVTE 244
G G S+++ + I++ E L + SQ + S+ + GL+ V I M + V++ +
Sbjct: 175 GNGISIVLTINIISRIPEDLSTLWSQFIASAANIPKAIVAGLIIVAIIAAMVVFVVLLQD 234
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
RK+ +QY +S R + + + IP +N SG+ PV+ L+ P I+AS L
Sbjct: 235 AQRKIPVQY-----SSKIRGNKQMGGQQTCIPLKVNTSGVIPVIFAQSLMQTPVIIASFL 289
Query: 305 G----------------SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNI-FDIAN 347
G W KE P S+G ++ I AF F NI F+
Sbjct: 290 GKGNGNGIGSKILKGLSQSNWCDPKE---PVYSIGLIVYIVLII-AFAYFYTNITFN--- 342
Query: 348 LPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILA 395
P EIA+ + + G IP ++PGK T +YL +I F G + L+ +A
Sbjct: 343 -PLEIANNMKRSGGFIPGIRPGKPTSDYLNQILNYIVFIGAIGLAFIA 389
>gi|374339838|ref|YP_005096574.1| preprotein translocase subunit SecY [Marinitoga piezophila KA3]
gi|372101372|gb|AEX85276.1| preprotein translocase, SecY subunit [Marinitoga piezophila KA3]
Length = 425
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 216/437 (49%), Gaps = 43/437 (9%)
Query: 16 LNNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+ +A ++ +K E+R R+ T + ++ R+G +IP+PG D + +L+ + S L
Sbjct: 1 MKDAFKNMWKIPELRDRIIFTLLALIAFRVGIYIPIPGIDLARW-ESFLAGLGTSSQGLI 59
Query: 75 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
F GA + S F L ++P I ASI++Q+L ++PSL ++ KEG +G +K
Sbjct: 60 SFFDIFAGGALKQFSIFVLSVTPYINASIILQLLSSVIPSLKEMLKEGEEGRKKFGKLTR 119
Query: 129 WISLGFAILEAVIVACYSLPYSIYAASHSVKHV--MVTAFLLVCGAMTMSWICDTISESG 186
++LG AIL+ + + S+ S Y A++ V +V+ +V G M + W+ + I+E G
Sbjct: 120 QVTLGLAILQGLFL---SMGVSAYRAANLNYFVFLIVSTISIVAGTMFLLWLGEMITEKG 176
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGS-SVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G S++I GI+ Y + + S +G SV W ++ + I T++ +
Sbjct: 177 IGNGISVLIFAGIVARYPQYI---ASGFVGRLSVFEWIVLIIIAIAVVIGTIY---LQTS 230
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
R++ +QY A + YIP +N G+ P++ + ++ PS+LA+ G
Sbjct: 231 ERRINVQY-----AKRVVGNKIYGGASTYIPIKVNGGGVLPIIFASAIMTLPSMLATATG 285
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARI 363
+ + P +Y +YA +F F F + P +I++ + K G I
Sbjct: 286 AGWVSKWFGYGTP---------LYLVLYAILIFFFAYFYNSVVIDPNDISENIKKYGGFI 336
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--IGFTSVLI 421
P ++PGK T +Y+TK F G + L I++ L YL R G + IG TS LI
Sbjct: 337 PGIRPGKPTSDYITKTMMRVTFIGAVFLVIIS-----LLPYLIRSAAGVNIWIGGTSALI 391
Query: 422 IVGSIIELRRSYQAYNV 438
VG +++ + +A+ +
Sbjct: 392 SVGVALDIMQQIEAHMI 408
>gi|295093653|emb|CBK82744.1| protein translocase subunit secY/sec61 alpha [Coprococcus sp.
ART55/1]
Length = 437
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 212/450 (47%), Gaps = 56/450 (12%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GA 78
+F +IRRRL T ++V+ R+G I +PG I + + + S++ F G+
Sbjct: 7 NAFKVQDIRRRLLYTFFILVVVRLGSLITVPGISADAIREYMQNALGDSLNIFSSFTGGS 66
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S F L ++P I ASI++Q+L +P+L +L+K+G DG +KI + ++++G AILE
Sbjct: 67 FEQMSIFALSVTPYITASIIIQLLTIAIPALEELQKDGEDGRKKITAITRYMTVGLAILE 126
Query: 139 -AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
A +V + I +++ V +L G+ + W+ + +E G G G S+I+ +
Sbjct: 127 SAGLVVGFGNKGVI--ENYNFWTVFCIVVILTAGSAIVMWLGERATEKGVGNGISVILLI 184
Query: 198 GILTGYTETLYKMLSQLLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
I++ + +Q + VR+ L +L V + ++ + RK+ +QY
Sbjct: 185 NIVSTMPNDFKNLYTQFMKGRDFVRFTLVGLIILAVVVLTVVFVCALQGAERKIPVQY-- 242
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 315
A R + +IP +N +G+ PV+ + +L+ P I V +
Sbjct: 243 ---AKTVRGRKTMGGQSSHIPLKVNTAGVIPVIFASSILSVPQI------------VVNL 287
Query: 316 LNPETS-VGAR---------------PW--VYYTIYAFFVFLFNIF--DIANLPKEIADY 355
N +TS VGA+ PW + +Y VF F F I P EIA+
Sbjct: 288 FNIKTSGVGAKIIQGMSQGYWFNRSYPWASIGLIVYILLVFFFAYFYTAITFNPMEIANN 347
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
+ K G +P ++PG++T +YL KI F G + L I+A + S G
Sbjct: 348 MKKSGGFVPGIRPGQSTQDYLNKILNYIIFIGAVGLIIVACIPMFFSGFF---GANVSFG 404
Query: 416 FTSVLIIVGSIIE---------LRRSYQAY 436
TS++I+VG +IE L R+YQ +
Sbjct: 405 GTSLIIVVGVVIETIKNIESRMLVRNYQGF 434
>gi|254522136|ref|ZP_05134191.1| preprotein translocase, SecY subunit [Stenotrophomonas sp. SKA14]
gi|386717238|ref|YP_006183564.1| preprotein translocase secY subunit (TC 3.A.5.1.1)
[Stenotrophomonas maltophilia D457]
gi|219719727|gb|EED38252.1| preprotein translocase, SecY subunit [Stenotrophomonas sp. SKA14]
gi|384076800|emb|CCH11385.1| Preprotein translocase secY subunit (TC 3.A.5.1.1)
[Stenotrophomonas maltophilia D457]
Length = 443
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 204/431 (47%), Gaps = 38/431 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV----SGSVDELGDF--GAE 79
+E+R+RL +++ RIG ++P+PG + P L+ + G VD F GA
Sbjct: 5 TELRQRLLFVVGALIVYRIGCYVPVPGVN----PDAMLAMMQQQGGGIVDMFNMFSGGAL 60
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+ S F L + P I ASI+MQ+ HI P+L ++KEG G KI Y ++ A+++
Sbjct: 61 HRFSIFALNVMPYISASIVMQLAVHIFPALKAMQKEGESGRRKITQYSRIGAVLLAVVQG 120
Query: 140 VIVACYSLPYSIYAASHSVKH------VMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
+A +L + + V + V+ L G M + W+ + ++E G G G SL
Sbjct: 121 GSIAL-ALQGQVSPSGAPVVYAPGMGFVLTAVVALTAGTMFLMWVGEQVTERGIGNGVSL 179
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
II GI+ G + ++++ +L + V T + V V G R++ + Y
Sbjct: 180 IIFAGIVAGLPGAVIHTFDAYRDGNIQFIQLLLIAIVVLAF-TFFVVFVERGQRRITVNY 238
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-----SPF 308
A + ++P +N +G+ P + + LLAFP+ LA G S F
Sbjct: 239 -----ARRQGGRNAYMNQTSFLPLKLNMAGVIPAIFASSLLAFPATLAMWSGQAANQSSF 293
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNV 366
Q ++++ N ++G ++ ++A + F F A + +E AD L K GA IP +
Sbjct: 294 GQVLQKVAN---ALGPGEPLHMIVFAALITGFAFFYTALVFNSQETADNLKKSGALIPGI 350
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGS 425
+PGKAT +Y+ + G L I+ +L +R ++N F G TS+LI+V
Sbjct: 351 RPGKATADYIDGVLTRLTAAGSAYLVIV----CLLPELMRTQLNASFYFGGTSLLIVVVV 406
Query: 426 IIELRRSYQAY 436
+++ QA+
Sbjct: 407 VMDFIAQVQAH 417
>gi|408671928|ref|YP_006871676.1| preprotein translocase, SecY subunit [Emticicia oligotrophica DSM
17448]
gi|387853552|gb|AFK01649.1| preprotein translocase, SecY subunit [Emticicia oligotrophica DSM
17448]
Length = 444
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 209/424 (49%), Gaps = 27/424 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 85
E+R+R+ T ++I++ RIG + LPG D + S + GA S
Sbjct: 15 EELRKRILNTILIILVFRIGSHVVLPGVDVAKLKDLTQSNGLLGLLNTLVGGAFQNASVM 74
Query: 86 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACY 145
LGI P I ASI +Q+L +P +L+KEG G K+ W+++ A +A
Sbjct: 75 ALGIMPYISASIAIQLLTLALPYFSKLQKEGESGRRKLNQITRWLTIIVAAAQAFTYVRA 134
Query: 146 SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTE 205
++ + + + + L+V G + W+ + ++E G G G S++I +GI++ +
Sbjct: 135 TISTDAITINQGLFY-FSSVILIVSGTVMCMWLGERMTEKGVGNGISMMIMIGIVSRFPG 193
Query: 206 TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARED 265
+ +Q G + + F+L ++ +F +V ++AV +T+ R++ +QY A +
Sbjct: 194 AIIGE-AQSRGGNGQILFFVLEIVALF-LVVLFAVAITQATRRIPVQY-----AKQIVGN 246
Query: 266 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI----LASILGSPFWQHVKEILNPETS 321
+T Y+P +N +G+ P++ L+ P + LA S +Q ++N TS
Sbjct: 247 KVVTGQRQYLPLKLNIAGVMPIIFGQALMFIPGLVLTYLAESTKSDTFQSWAIVMNSPTS 306
Query: 322 VGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKI 379
W Y IYA + F F I+ P +IAD + + G IP VKPG+ T +++ +
Sbjct: 307 -----WQYCVIYAILIIGFTFFYTAISINPNQIADDMKRGGGFIPGVKPGQPTSDFVADV 361
Query: 380 QASTRFWGGLLLSILATSSTILDHY--LRRINEGFS--IGFTSVLIIVGSIIELRRSYQA 435
GG+LL+++A IL + L + +GF+ G TS+LI+VG +++ + ++
Sbjct: 362 LDRITLPGGVLLAVIA----ILPAFAGLLGMTQGFASFFGGTSLLILVGVVLDTLQQIES 417
Query: 436 YNVM 439
Y +M
Sbjct: 418 YLLM 421
>gi|322386333|ref|ZP_08059963.1| preprotein translocase subunit SecY [Streptococcus cristatus ATCC
51100]
gi|417921172|ref|ZP_12564666.1| preprotein translocase, SecY subunit [Streptococcus cristatus ATCC
51100]
gi|321269557|gb|EFX52487.1| preprotein translocase subunit SecY [Streptococcus cristatus ATCC
51100]
gi|342834756|gb|EGU69019.1| preprotein translocase, SecY subunit [Streptococcus cristatus ATCC
51100]
Length = 436
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 216/433 (49%), Gaps = 48/433 (11%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 79
++R ++ T +I++ RIG I +PG + + + + LS VSG+ A
Sbjct: 14 QVRSKILFTLFIILVFRIGTTITVPGINAKALNSLSDLPFLNMLSLVSGN--------AM 65
Query: 80 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
S F LG+SP I ASI++Q+L ++P V+ K+G G K+ +ISL A ++
Sbjct: 66 RNFSVFALGVSPYITASIVVQLLQMDLLPKFVEWGKQGEVGRRKLNQATRYISLVLAFVQ 125
Query: 139 AV-IVACY-SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++ I A + +L + A+ + + ++ LL G++ ++W+ + I++ G+G G S+II
Sbjct: 126 SIGITAGFATLSRTKLVANPNWQTYLLIGALLTTGSVIVTWLGEQITDKGYGNGVSMIIF 185
Query: 197 VGILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMW-AVVVTEGCR 247
GI++G Y + + S L SS+ +G+L V +V ++ V +
Sbjct: 186 AGIVSGIPGMIKGIYEDYFVNIPSDRLNSSL----IFVGILIVAVLVIIYFTTFVQQAEY 241
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL---ASIL 304
K+ +QY K+A A S Y+P +NP+G+ PV+ + + A P+ + S +
Sbjct: 242 KIPIQYT--KIAQGAPSSS-------YLPLKVNPAGVIPVIFASSITAAPAAIFQFVSAM 292
Query: 305 G-SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 363
G + W + L T++ + Y + F F + I P++ A+ L K GA I
Sbjct: 293 GYNASWVRTAQALLATTTISGM-FTYALLIILFTFFYTFVQIN--PEKTAENLQKSGAYI 349
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P V+PGK T EY++K+ G L L I+ T IL L + + ++G TS+LII+
Sbjct: 350 PGVRPGKGTEEYMSKLLRRLATVGSLFLGII-TIIPILAKDLFGLTDAVALGGTSLLIII 408
Query: 424 GSIIELRRSYQAY 436
+ IE + + Y
Sbjct: 409 STGIEGMKQLEGY 421
>gi|227894540|ref|ZP_04012345.1| preprotein translocase subunit SecY [Lactobacillus ultunensis DSM
16047]
gi|227863699|gb|EEJ71120.1| preprotein translocase subunit SecY [Lactobacillus ultunensis DSM
16047]
Length = 431
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 212/430 (49%), Gaps = 27/430 (6%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
S L NA F EIR +++ T ++++ RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIYFTLFILLLYRIGANITVPGVNAKAITQVAQTGLVPMLDTV 59
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLTL 118
Query: 133 GFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFVQSIGITLGFNALTQMGLVKNQTPQTYIEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 245
S+II GI+ L+++ + + +S RW F + ++ IVT V +
Sbjct: 179 VSVIIFAGIIARLPSGLWQIYKEEIINNSASDRWQGILFFIAVIVAILIVTQLVTWVEQA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASIL 304
R++ +QY + I+ E ++P +N SG+ PV+ + + P +IL +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIVTPATILMAFQ 289
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGAR 362
+ Q +++N S+ P V IY + LF F + P+++A+ L K GA
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGVI--IYTLLIILFTFFYAFVQVNPEKLAENLQKQGAY 347
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP+V PGK T Y++K+ G + L ++A + ++ + +G TS+LI+
Sbjct: 348 IPSVWPGKDTQNYVSKMLIKLSTVGSIFLGLVALLPQLATNFW-NLPSSIGLGGTSLLIV 406
Query: 423 VGSIIELRRS 432
+G ++EL R
Sbjct: 407 IGVVLELSRQ 416
>gi|94676471|ref|YP_588796.1| preprotein translocase, SecY subunit [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
gi|94219621|gb|ABF13780.1| preprotein translocase, SecY subunit [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
Length = 444
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 212/433 (48%), Gaps = 42/433 (9%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 75
+N+ + +E+R R+F +V+ RIG FIP+PG + ++ Q L G++ E+ +
Sbjct: 7 VNSKNTKIWFAELRCRIFFLLGALVVFRIGTFIPIPGINTTILSQ-LLEEQKGTIIEIFN 65
Query: 76 F---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
GA + S F LGI P I ASI++ +L I P+L L+KEG G KI+ Y +++L
Sbjct: 66 MFSGGALNRASIFALGIMPYISASIILHLLTVIHPTLADLKKEGKSGRRKIRQYTCYVTL 125
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFL---------LVCGAMTMSWICDTIS 183
IL+++ +A + + + +++ L L+CG M + W+ + I+
Sbjct: 126 LLGILQSIGIA------NSFTTMSGIHQIIIDPGLLFYSTAVISLLCGTMFLMWLGNQIT 179
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT 243
E G G G S+II GI+ G + K + +L + +L + + IVT V V
Sbjct: 180 ERGLGNGISVIIFTGIIAGLPSAISKTI-ELTRQGDLPFIILLLIGIIVFIVTFVVVFVE 238
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
G R++ + Y A + ++P +N +G+ P + ++ FP+ LAS
Sbjct: 239 RGQRRIIINY-----AQRQQGRRIYAAQHTHLPIKVNIAGVLPAIFAASIILFPATLASW 293
Query: 304 L-GSPFWQHVKEI---LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLN 357
G+ W+ + I L P +Y +YA + F F A + P++ A+ L
Sbjct: 294 FGGTTRWRWLNSIYLYLQPNQP------IYVLLYAIAIMFFCFFYTALVFNPRDTANNLK 347
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGF 416
K GA +P ++PG+ T +YL + +G + + ++ ++ ++R I N F G
Sbjct: 348 KSGAFVPGIRPGEQTAKYLNIVTNRLTLFGAIYMVVVC----LIPEFMRDIMNVPFYFGG 403
Query: 417 TSVLIIVGSIIEL 429
TS+LI+V I+EL
Sbjct: 404 TSLLIVVVVIMEL 416
>gi|402831885|ref|ZP_10880555.1| preprotein translocase, SecY subunit [Capnocytophaga sp. CM59]
gi|402280318|gb|EJU29029.1| preprotein translocase, SecY subunit [Capnocytophaga sp. CM59]
Length = 442
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 205/423 (48%), Gaps = 24/423 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF--GAELKL 82
E+R R+ +T ++++ R G I LPG D +L + G +D L F GA K
Sbjct: 15 EELRNRIILTLGILLVYRFGAHIILPGIDAEQLSKLTQRTSEGGLLDILNAFTGGAFAKA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI- 141
S F LGI P I ASI++Q++ +P L +L++EG G +I W+++ I++A
Sbjct: 75 SVFALGIMPYISASIVVQLMGIAIPYLQKLQQEGESGRRRINQITRWLTIAICIVQAPAY 134
Query: 142 ---VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
++ +P + + ++ + +LV G + W+ + I++ G G G SL+I VG
Sbjct: 135 LYSISALGVPDEAFIQGKGLGFIIPSVIILVTGTVFAMWLGEKITDKGVGNGISLLIMVG 194
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ + ++++ + +L LL V + + +T R++ +QY +
Sbjct: 195 IIARMPHAFFGEMNRVHSPMLVIVEILLWLL-----VILGCIFLTLAVRQIPVQYA--RR 247
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
+ + + I YIP +N +G+ P++ ++ P+ LA + S + ++
Sbjct: 248 TTGGQVEKNIFGARQYIPLKLNSAGVMPIIFAQAIMFVPAALAGLSKSEWALSIQNAFRS 307
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIA-NLP-KEIADYLNKMGARIPNVKPGKATIEYL 376
W Y ++ + +F F A +P ++AD L + G IP VKPG+ T EYL
Sbjct: 308 PFEF----W-YNVLFGLLIIIFTYFYTAITVPSNKMADDLKRNGGFIPGVKPGQETSEYL 362
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHY-LRRINEGFSI--GFTSVLIIVGSIIELRRSY 433
KI + F G L L +A I++ L I++ +++ G TS+LI+VG I+ +
Sbjct: 363 DKIMSLITFPGSLFLVAIAVLPAIVNKIPLLEIDQQWALFYGGTSLLILVGVAIDTMQQV 422
Query: 434 QAY 436
+Y
Sbjct: 423 NSY 425
>gi|359442404|ref|ZP_09232272.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20429]
gi|392535589|ref|ZP_10282726.1| preprotein translocase subunit SecY [Pseudoalteromonas arctica A
37-1-2]
gi|358035778|dbj|GAA68521.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20429]
Length = 442
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 205/443 (46%), Gaps = 44/443 (9%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++RRL I+I R+G F+P+PG D ++ D+ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVL-ADFFEQQKGTIVEMFNMFSGGALERA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI+ Q+L H+ P ++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIITQLLTHMYPPFIELKKEGEQGRKKISQYTRYGTLVLATIQSIGI 134
Query: 143 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A SLP + + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AS-SLPGMMEGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWP------FMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY 253
L +GS+V F+L ++ V + VV E G R++ + Y
Sbjct: 194 AN--------LPSAIGSTVEMARQGDLNVFVLLMVAVIVFAVTYLVVFFERGQRRIVVNY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SP 307
A + ++P +N +G+ P + + ++ FP +AS G +
Sbjct: 246 -----AKRQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVAD 300
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPN 365
Q V L P +P +Y + A + F F A + P+E AD L K GA IP
Sbjct: 301 VLQAVATTLTP-----GQP-LYSLVLAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPG 354
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+ K+ G L ++ + + + F G TSVLIIV
Sbjct: 355 IRPGEQTSKYIDKVMTRLTLAGALYITFICLVPEFMTMAWQ---TPFYFGGTSVLIIVVV 411
Query: 426 IIELRRSYQAYNVMPSLSKALRR 448
I++ Q + + L++
Sbjct: 412 IMDFMAQVQTHLMSHQYDSVLKK 434
>gi|190572964|ref|YP_001970809.1| preprotein translocase subunit SecY [Stenotrophomonas maltophilia
K279a]
gi|408823541|ref|ZP_11208431.1| preprotein translocase subunit SecY [Pseudomonas geniculata N1]
gi|424667224|ref|ZP_18104249.1| preprotein translocase, SecY subunit [Stenotrophomonas maltophilia
Ab55555]
gi|190010886|emb|CAQ44495.1| putative preprotein translocase SecY subunit [Stenotrophomonas
maltophilia K279a]
gi|401069359|gb|EJP77881.1| preprotein translocase, SecY subunit [Stenotrophomonas maltophilia
Ab55555]
gi|456738114|gb|EMF62791.1| Preprotein translocase secY subunit [Stenotrophomonas maltophilia
EPM1]
Length = 455
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 204/431 (47%), Gaps = 38/431 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV----SGSVDELGDF--GAE 79
+E+R+RL +++ RIG ++P+PG + P L+ + G VD F GA
Sbjct: 17 TELRQRLLFVVGALIVYRIGCYVPVPGVN----PDAMLAMMQQQGGGIVDMFNMFSGGAL 72
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+ S F L + P I ASI+MQ+ HI P+L ++KEG G KI Y ++ A+++
Sbjct: 73 HRFSIFALNVMPYISASIVMQLAVHIFPALKAMQKEGESGRRKITQYSRIGAVLLAVVQG 132
Query: 140 VIVACYSLPYSIYAASHSVKH------VMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
+A +L + + V + V+ L G M + W+ + ++E G G G SL
Sbjct: 133 GSIAL-ALQGQVSPSGAPVVYAPGMGFVLTAVVALTAGTMFLMWVGEQVTERGIGNGVSL 191
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
II GI+ G + ++++ +L + V T + V V G R++ + Y
Sbjct: 192 IIFAGIVAGLPGAIIHTFDAYRDGNIQFIQLLLIAIVVLAF-TFFVVFVERGQRRITVNY 250
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-----SPF 308
A + ++P +N +G+ P + + LLAFP+ LA G S F
Sbjct: 251 -----ARRQGGRNAYMNQTSFLPLKLNMAGVIPAIFASSLLAFPATLAMWSGQAANQSSF 305
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNV 366
Q ++++ N ++G ++ ++A + F F A + +E AD L K GA IP +
Sbjct: 306 GQVLQKVAN---ALGPGEPLHMIVFAALITGFAFFYTALVFNSQETADNLKKSGALIPGI 362
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGS 425
+PGKAT +Y+ + G L I+ +L +R ++N F G TS+LI+V
Sbjct: 363 RPGKATADYIDGVLTRLTAAGSAYLVIV----CLLPELMRTQLNASFYFGGTSLLIVVVV 418
Query: 426 IIELRRSYQAY 436
+++ QA+
Sbjct: 419 VMDFIAQVQAH 429
>gi|56460996|ref|YP_156277.1| preprotein translocase subunit SecY [Idiomarina loihiensis L2TR]
gi|56180006|gb|AAV82728.1| Preprotein translocase subunit SecY [Idiomarina loihiensis L2TR]
Length = 442
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 199/436 (45%), Gaps = 30/436 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
SE++RRL I++ R G F+P+PG D ++ Q + V F GA + S
Sbjct: 16 SELKRRLLFVLGAIIVFRAGSFVPIPGIDAAVLAQLFEQQKDTIVAMFNMFSGGALERAS 75
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI+MQ+ + P L +L+KEG G KI Y W +L A +++ +A
Sbjct: 76 VFALGIMPYISASIIMQLASVVHPRLAELKKEGESGRRKINQYTRWGTLILATFQSIGIA 135
Query: 144 C---YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+P + V + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 136 TGLPNLMPGLVIDPGFGFYFTAVVS--LVTGTMFLMWLGEQITERGIGNGISILIFVGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + Q + +L + V VT + V V G R++ + Y A
Sbjct: 194 AGLPSAIGQTAEQARQGDLHLLLLLL-IGVVVLAVTYFVVFVERGQRRIVVNY-----AK 247
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS------PFWQHVKE 314
+ ++P +N +G+ P + + ++ FP +A+ GS F Q V
Sbjct: 248 RQQGRKVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIATWFGSGEGMVADFLQQVSM 307
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKAT 372
L+P +P +Y +YA + F F A + P+E AD L K GA IP ++PG+ T
Sbjct: 308 TLSP-----GQP-LYVLLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQT 361
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
Y+ K+ G L ++ + + + + N F G TS+LIIV I++
Sbjct: 362 SRYIDKVMTRLTLAGALYITFVC---LVPEFMMIAWNVQFYFGGTSLLIIVVVIMDFMAQ 418
Query: 433 YQAYNVMPSLSKALRR 448
Q + + L++
Sbjct: 419 VQTHMMSHQYDSVLKK 434
>gi|218885207|ref|YP_002434528.1| preprotein translocase subunit SecY [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756161|gb|ACL07060.1| preprotein translocase, SecY subunit [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 437
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 198/421 (47%), Gaps = 27/421 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E+R++LF T +L+ RIG +P+PG D + D+ + V ++ L D G LS
Sbjct: 14 ELRKKLFWTFLLLAAYRIGVHVPVPGVDSGAL-ADFFASVQNTLFGLFDMFSGGGLRNLS 72
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILEAVIV 142
F LGI P I ASI++Q+L + P L ++ KE G G KI Y + ++ +++ +
Sbjct: 73 VFALGIMPYISASIIIQLLQVVSPELKRMAKEEGAAGRRKITQYTRYATVLITVIQGFGI 132
Query: 143 ACYSLPYSIYAASHSVKHV-----MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
A A + V M+T L G + + W+ + I+E G G G SLII
Sbjct: 133 AVGLENMHSPAGAPVVLDAGWGFRMITIATLTAGTVLIMWLGEQITEKGIGNGISLIIFS 192
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
GI+ G + K + + + +L +L + +V V + G R++ + Y +
Sbjct: 193 GIVAGIPGGIVKSGQLIKAGDMSVFTAIL-VLALMAVVLGCIVFMERGQRRIPIHYAKRQ 251
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 317
+ ++P IN +G+ P + + LL FP+ +AS + Q V
Sbjct: 252 VGRKMFGGQ-----STHLPLRINTAGVIPPIFASSLLLFPATIASFSANETLQRVAAWFA 306
Query: 318 PETSVGARPWVYYTIYAFFVFLFN--IFDIANLPKEIADYLNKMGARIPNVKPGKATIEY 375
P T + ++ ++ FF F + IFD PK+IA+ L K G IP ++PG T +Y
Sbjct: 307 PHTVM--YNILFISLIVFFCFFYTAIIFD----PKDIAENLKKGGGFIPGIRPGDKTRQY 360
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
+ ++ WG + +S + IL + + N F G TSVLI+VG ++ ++
Sbjct: 361 IDRVLTRMTIWGAIYISAICVLPMIL---IAQFNVPFYFGGTSVLILVGVAMDFMSQVES 417
Query: 436 Y 436
+
Sbjct: 418 H 418
>gi|166154725|ref|YP_001654843.1| preprotein translocase subunit SecY [Chlamydia trachomatis 434/Bu]
gi|166155600|ref|YP_001653855.1| preprotein translocase subunit SecY [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335999|ref|ZP_07224243.1| preprotein translocase subunit SecY [Chlamydia trachomatis L2tet1]
gi|339626194|ref|YP_004717673.1| preprotein translocase subunit SecY [Chlamydia trachomatis L2c]
gi|165930713|emb|CAP04210.1| protein translocase subunit [Chlamydia trachomatis 434/Bu]
gi|165931588|emb|CAP07164.1| protein translocase subunit [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|339461216|gb|AEJ77719.1| preprotein translocase, SecY subunit [Chlamydia trachomatis L2c]
gi|440526321|emb|CCP51805.1| preprotein translocase subunit SecY [Chlamydia trachomatis
L2b/8200/07]
gi|440536146|emb|CCP61659.1| preprotein translocase subunit SecY [Chlamydia trachomatis L2b/795]
gi|440537039|emb|CCP62553.1| preprotein translocase subunit SecY [Chlamydia trachomatis
L1/440/LN]
gi|440537928|emb|CCP63442.1| preprotein translocase subunit SecY [Chlamydia trachomatis
L1/1322/p2]
gi|440538818|emb|CCP64332.1| preprotein translocase subunit SecY [Chlamydia trachomatis L1/115]
gi|440539707|emb|CCP65221.1| preprotein translocase subunit SecY [Chlamydia trachomatis L1/224]
gi|440540599|emb|CCP66113.1| preprotein translocase subunit SecY [Chlamydia trachomatis
L2/25667R]
gi|440541487|emb|CCP67001.1| preprotein translocase subunit SecY [Chlamydia trachomatis
L3/404/LN]
gi|440542374|emb|CCP67888.1| preprotein translocase subunit SecY [Chlamydia trachomatis
L2b/UCH-2]
gi|440543265|emb|CCP68779.1| preprotein translocase subunit SecY [Chlamydia trachomatis
L2b/Canada2]
gi|440544156|emb|CCP69670.1| preprotein translocase subunit SecY [Chlamydia trachomatis L2b/LST]
gi|440545936|emb|CCP71450.1| preprotein translocase subunit SecY [Chlamydia trachomatis
L2b/CV204]
gi|440914198|emb|CCP90615.1| preprotein translocase subunit SecY [Chlamydia trachomatis
L2b/Ams2]
gi|440915088|emb|CCP91505.1| preprotein translocase subunit SecY [Chlamydia trachomatis
L2b/Ams3]
gi|440915979|emb|CCP92396.1| preprotein translocase subunit SecY [Chlamydia trachomatis
L2b/Canada1]
gi|440916874|emb|CCP93291.1| preprotein translocase subunit SecY [Chlamydia trachomatis
L2b/Ams4]
gi|440917764|emb|CCP94181.1| preprotein translocase subunit SecY [Chlamydia trachomatis
L2b/Ams5]
Length = 457
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 222/459 (48%), Gaps = 45/459 (9%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 76
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRLFTLVL 125
Query: 135 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A ++L P + A S+K + T ++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMTTGTLLLMWVGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF----MLGLLGVFTIVTM 237
IS+ G G G SLII +GIL + L + ++L S F +L L VF V +
Sbjct: 186 ISDKGIGNGISLIITLGILASFPSVLGSIFNKLNLGSQDPSEFGIVSLLILCAVFVFVLI 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVLTTTYLL 294
V++ EG RK+ +Q+ AR EV Y+P +N +G+ PV+ + LL
Sbjct: 246 ATVLIIEGVRKIPVQH--------ARRIIGRREVVGGGSYLPLKVNYAGVIPVIFASSLL 297
Query: 295 AFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PK 350
FP+ + L S + + + +L+P + Y Y + F F A P+
Sbjct: 298 MFPATIGQFLSSESSWLKRIATMLSPGSV------AYSIFYVLLIIFFTYFWTATQFRPE 351
Query: 351 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RIN 409
+IA + K GA IP ++ GK T YL G + L+++A ++L LR N
Sbjct: 352 QIASEMKKNGAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVVAILPSVLGRILRVDAN 411
Query: 410 EGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+ +G T++LI+VG I++ + A+ ++ L++
Sbjct: 412 VSYFLGGTAMLIVVGVILDTMKQIDAFLLVRRYDGVLKK 450
>gi|406899949|gb|EKD43079.1| hypothetical protein ACD_72C00468G0005 [uncultured bacterium]
Length = 424
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 204/431 (47%), Gaps = 31/431 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF--VSGSVDELGDFGAELKLS 83
E+R + ++VI R+ +P+PG + + +DYL+ + G ++ G S
Sbjct: 12 KEVRNNILFVVAMLVIFRLASHVPVPGVNVANL-RDYLAGNQILGLLNVFSG-GTMSNFS 69
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE--AVI 141
LG++P I ASI+ Q+L IVPSL +L KEG G +K+ Y ++++ A L+ A+I
Sbjct: 70 VIMLGVAPYITASIIFQLLAMIVPSLEELSKEGESGQQKLSMYTRYLTVPLAFLQSFAMI 129
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
+ P I A + + V + F + G M + W+ + ISE G G SL+I GI+
Sbjct: 130 RLLNNSPRPILADLTTFRMVTIM-FTITAGTMFLVWLGELISEKKVGNGMSLLIFAGIVA 188
Query: 202 GYTETLYKMLSQLLGSSVRWWPF-MLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
TL SS + F M+ ++ + T+V + V ++EG R + + Y A
Sbjct: 189 ALPSTLRTAFVNY--SSADLYTFVMMTVVALLTVVGV--VFISEGQRNIPVNY-----AK 239
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI----L 316
R ++ ++P +N SG+ P++ L+ FP ++A F+ + L
Sbjct: 240 QMRGNNAFGGGSSHLPIRVNMSGVIPIIFAVSLVLFPPMVAQ-----FFVQARSAWLANL 294
Query: 317 NPETSVGARPWVYYTI-YAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
+T YY I Y VF F F A + P+++++ L + G +P ++PGK T
Sbjct: 295 ATKTITFFNDQTYYGIMYFVLVFFFTYFYTAVVFNPQKVSENLQRQGGFVPGIRPGKETE 354
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
+YL I G L L I+A ++ + F IG TS+LI+V IE +
Sbjct: 355 KYLGMIVNRINLIGALFLGIIAVLPLLVQG--ASGSTAFQIGGTSLLIVVAVAIETTKQV 412
Query: 434 QAYNVMPSLSK 444
+A M + +
Sbjct: 413 EAQVTMHNYDR 423
>gi|325267156|ref|ZP_08133824.1| preprotein translocase subunit SecY [Kingella denitrificans ATCC
33394]
gi|324981394|gb|EGC17038.1| preprotein translocase subunit SecY [Kingella denitrificans ATCC
33394]
Length = 429
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 210/437 (48%), Gaps = 41/437 (9%)
Query: 27 EIRRR-LFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
++R+R LF+ LIV RIG +P+PG D + Q Y G + L F G+ + S
Sbjct: 18 DLRKRFLFLLGALIVF-RIGAHVPVPGVDAAALAQLYKDQGGGILGMLNMFSGGSLERFS 76
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F +GI P I ASI+MQ+ IVPSL L+KEG G + I Y ++ A +++ VA
Sbjct: 77 IFAIGIMPYISASIIMQLAAEIVPSLKSLKKEGEAGKKVITKYTRIGTVALAAAQSIGVA 136
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
+ L I ++ + T LV G M + W+ + I+E G G G SL+I GI+ G
Sbjct: 137 TFLLQRQIVVIPQ-IEFYISTVSCLVGGTMFLMWLGEQITERGLGNGISLLITAGIIAGV 195
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAA 262
+ ++ S + +++ + ++G+ ++ +AVV E RK+ + Y A
Sbjct: 196 PAGVIQLWSLITEQTIQPLTAIGIVIGILLMI--YAVVYFESALRKIPIHY-------AK 246
Query: 263 REDSPIT-EVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETS 321
R+ + ++PF +N +G+ P + + ++ FPS+LA LG+ NP +
Sbjct: 247 RQTGLYSAHKNTHMPFKLNMAGVIPPIFASSVIMFPSMLAGWLGND---------NPNSW 297
Query: 322 VG--------ARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKA 371
G +P Y ++A + F F +A PKE+A+ L K GA +P+++PG+
Sbjct: 298 YGKILAALQHGQP-AYIVLFAATIIFFCYFYTALAFSPKEMAENLKKSGAFVPSIRPGEQ 356
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T YL + +G + ++++ L Y+ +G TS+LI+V ++
Sbjct: 357 TARYLEGVVLRLTLFGAIYITVICLIPEFLASYVS-----IPLGGTSLLILVVVTMDFNT 411
Query: 432 SYQAYNVMPSLSKALRR 448
+Y + + R
Sbjct: 412 QLASYRMTQQYEHLIER 428
>gi|291523750|emb|CBK89337.1| protein translocase subunit secY/sec61 alpha [Eubacterium rectale
DSM 17629]
gi|291528784|emb|CBK94370.1| protein translocase subunit secY/sec61 alpha [Eubacterium rectale
M104/1]
Length = 439
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 201/408 (49%), Gaps = 46/408 (11%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F ++R R+ T +++++ RIG +P+PG + Q +L+ S S D LG
Sbjct: 1 MLKTLRNAFKIKDVRNRILFTFMMLIVIRIGSELPIPGVKGSVF-QSWLN--SKSTDGLG 57
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
G+ ++S F L I+P I +SI+MQ+L +P L +++++G DG +KI +
Sbjct: 58 FVDAITGGSFSQMSVFALNITPYITSSIIMQLLTIAIPKLEEMQRDGEDGRKKIVEITRY 117
Query: 130 ISLGFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
+++ +LE+V ++ Y Y +V V+ + L G+ + WI + I+E G
Sbjct: 118 LTIALGLLESVMMVIGFYRQNYLTEKTPLTVIMVVTS---LTAGSAVLMWIGERITEKGV 174
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRW-WPFMLGLLGVFTIVTM--WAVVVTE 244
G G S+++ + I++ E L + SQ + S+ + GL+ V I M + V++ +
Sbjct: 175 GNGISIVLTINIISRIPEDLSTLWSQFIASAANVPKAIVAGLIIVAIIAAMVVFVVLLQD 234
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
RK+ +QY +S R + + + IP +N SG+ PV+ L+ P I+AS L
Sbjct: 235 AQRKIPVQY-----SSKIRGNKQMGGQQTCIPLKVNTSGVIPVIFAQSLMQTPVIIASFL 289
Query: 305 G----------------SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNI-FDIAN 347
G W KE P S+G ++ I AF F NI F+
Sbjct: 290 GKGNGNGIGSKILKGLSQSNWCDPKE---PVYSIGLIVYIVLII-AFAYFYTNITFN--- 342
Query: 348 LPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILA 395
P EIA+ + + G IP ++PGK T +YL +I F G + L+ +A
Sbjct: 343 -PLEIANNMKRSGGFIPGIRPGKPTSDYLNQILNYIVFIGAIGLAFIA 389
>gi|210611145|ref|ZP_03288759.1| hypothetical protein CLONEX_00949 [Clostridium nexile DSM 1787]
gi|210152132|gb|EEA83139.1| hypothetical protein CLONEX_00949 [Clostridium nexile DSM 1787]
Length = 451
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 212/433 (48%), Gaps = 32/433 (7%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GA 78
++F EIR+++F T ++ + R+G +P PG D I + + + + F G+
Sbjct: 7 KAFQIEEIRKKIFYTFAMLFVVRLGSQLPTPGVDPTFIQNFFANQTGEAFNFFNAFTGGS 66
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S F L I+P I +SI+MQ+L +P L +++K+G +G +KI ++ ++++ A+++
Sbjct: 67 FEQMSIFALSITPYITSSIIMQLLTIAIPKLEEMQKDGEEGRKKIAAFTRYVTVLLALIQ 126
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+ +A S ++ + + L G+ + WI + I+E G G G S+++ +
Sbjct: 127 STAMAV-GFGRSGLLVEYNFVNAAIVVLTLTAGSAFLMWIGERITEKGVGNGISIVLLIN 185
Query: 199 ILTGYTETLYKMLSQLL-GSSVRWWPF-MLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
IL+ + + +Q + G S+ ++ + V ++ + + +G RK+ +QY
Sbjct: 186 ILSRIPDDFNTLYTQFMKGKSLATAGLAAFIIVAIILAVIVFVIFLQDGQRKIAVQY--- 242
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV-KEI 315
+ + + +IP +N +G+ PV+ + L+ FP ++AS LG + EI
Sbjct: 243 --SQKIQGRKNVGGQSTFIPLKVNTAGVIPVIFASSLMQFPIVIASFLGKGDGDGIGSEI 300
Query: 316 L---------NPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 363
L NPE W VY + F + + I P EIA+ + K G I
Sbjct: 301 LRGLNSNNWCNPENI--KYSWGLIVYIILTILFAYFYT--SITFNPLEIANNMKKSGGFI 356
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLII 422
P ++PGK T++YL KI F G + L I+ ++ + + S G TS++II
Sbjct: 357 PGIRPGKPTVDYLAKILKYIIFIGAIGLVIV----QVIPFFFNGVFGAHVSFGGTSIIII 412
Query: 423 VGSIIELRRSYQA 435
VG ++E + ++
Sbjct: 413 VGVVLETLKQIES 425
>gi|12230545|sp|Q9XQU4.1|SECY_PEA RecName: Full=Preprotein translocase subunit SECY, chloroplastic;
AltName: Full=CpSecY; Flags: Precursor
gi|4929291|gb|AAD33936.1|AF144684_1 secY [Pisum sativum]
Length = 527
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 199/427 (46%), Gaps = 40/427 (9%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL----IPQDYL-----SFVSGSVDE 72
FF + + + +SR+G +IPL G +R + Q+ L SF G +
Sbjct: 110 DFFNGPLPGKFLKLLGFLALSRLGVYIPLGGVNRDAFLGNLDQNSLLTTLDSFSGGGIGR 169
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWIS 131
LG LGI P I A I+ Q+L + P L L +KEG G +K+ Y + S
Sbjct: 170 LG---------ICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKLLQYTRYAS 220
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+GFAI++A+ + PY A + + + + LL G++ ++I + I+E G G+
Sbjct: 221 VGFAIVQAIGQVLFLRPY---ANDFTTEWALTSVILLTLGSVFTTYIGEQITELKLGNGT 277
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SL+I I++ + + SQ + + ++ ++ F ++ + V V E RK+ +
Sbjct: 278 SLLIFTNIISYLPASFGRTFSQAFSDA--NYVGLVTIIVSFFLLVLGIVYVQEAERKIPI 335
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
Y AS S E Y+PF +N SG+ P++ +T LA P LA G +
Sbjct: 336 NY-----ASRFTSKSGGIEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSSLKT 390
Query: 312 VKEILNPETSVGARPWVYYTIY--AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPG 369
LNP G ++ + I AFF + + + P ++++ L + GA IP V+PG
Sbjct: 391 AAVALNP----GGSFYLPFNILLIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPG 444
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIE 428
K+T ++ + + G L+ILA +++ GF+ TS+LI+VG +
Sbjct: 445 KSTATFIKTVLSRISVLGSTFLAILAAGPAVVEQTAHLTAFRGFA--GTSILILVGCATD 502
Query: 429 LRRSYQA 435
R +A
Sbjct: 503 TARKVRA 509
>gi|217077303|ref|YP_002335021.1| preprotein translocase subunit SecY [Thermosipho africanus TCF52B]
gi|217037158|gb|ACJ75680.1| preprotein translocase, SecY subunit [Thermosipho africanus TCF52B]
Length = 428
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 213/442 (48%), Gaps = 59/442 (13%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---- 76
+F E+R R+ T +++++ R+G ++P+PG + + + +GS L F
Sbjct: 7 NAFRIPELRDRIVFTLLMLIVFRLGIYVPVPGVNLKAWGAAFSQMGTGSAGGLLSFYDVF 66
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA S F L ++P I ASI++Q+L ++PSL ++ KEG +G +K + +++
Sbjct: 67 TGGAFRSFSIFALSVTPYINASIILQLLSSVIPSLKEMLKEGEEGRKKFQKLTRNLTVLL 126
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVT-----AFL----LVCGAMTMSWICDTISES 185
L+A +++ + + ++++V FL L+ G M + WI D I+E
Sbjct: 127 GALQAFVIS--------FGLARGFENILVIPLWTFVFLATVSLLAGTMFLLWIGDRITEK 178
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G G S++I GI+ Y Y + L G ++ W F LLGV ++ + + V +
Sbjct: 179 GIGNGISVLIFAGIVARYPT--YFRTAVLGGLNIFEWIF---LLGVMFLMVIGIIYVQQA 233
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
R++ +QY AS +IP +N SG+ P++ +++ P +A +
Sbjct: 234 ERRIMVQY-----ASRMVGRRIYGGTSTHIPIKVNHSGVIPIIFGWAIVSIPVGIAQLTN 288
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFN------IFDIANLPKEIADYLNKM 359
S + + + +P + TIYA +F F +FD PK+I+ +
Sbjct: 289 SETAKSLFSMTSP---------LVITIYAVLIFFFTYFYSVVVFD----PKDISQNIKSY 335
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFT 417
G IP ++PGK T +Y+T++ F G L L +A L YL + G +I G T
Sbjct: 336 GGYIPGIRPGKPTEQYITRVLNRITFVGALFLVAIA-----LVPYLVQGVTGVNIWLGGT 390
Query: 418 SVLIIVGSIIELRRSYQAYNVM 439
S LI VG +++ + +A+ +M
Sbjct: 391 SALIAVGVALDIAQQMEAHLIM 412
>gi|282849884|ref|ZP_06259267.1| preprotein translocase, SecY subunit [Veillonella parvula ATCC
17745]
gi|294792814|ref|ZP_06757961.1| preprotein translocase, SecY subunit [Veillonella sp. 6_1_27]
gi|294794568|ref|ZP_06759704.1| preprotein translocase, SecY subunit [Veillonella sp. 3_1_44]
gi|417000184|ref|ZP_11940505.1| preprotein translocase, SecY subunit [Veillonella parvula
ACS-068-V-Sch12]
gi|282580321|gb|EFB85721.1| preprotein translocase, SecY subunit [Veillonella parvula ATCC
17745]
gi|294454898|gb|EFG23271.1| preprotein translocase, SecY subunit [Veillonella sp. 3_1_44]
gi|294456713|gb|EFG25076.1| preprotein translocase, SecY subunit [Veillonella sp. 6_1_27]
gi|333976265|gb|EGL77135.1| preprotein translocase, SecY subunit [Veillonella parvula
ACS-068-V-Sch12]
Length = 420
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 209/432 (48%), Gaps = 35/432 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L++ + F +E+R ++ T ++ + R G IP+PG D +I F SG++ L
Sbjct: 1 MLDSLSNIFKITELRNKILYTLMMFAVFRAGIHIPVPGVDASVIES---LFTSGNLFGLL 57
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
D GA K S F + I+P I ASI+MQ+L +VP K+G DG +KI + +
Sbjct: 58 DLFAGGALSKFSIFAMSITPYINASIIMQLLQSVVPQFEAWSKDGEDGRKKIAKVTRYGT 117
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+ ++A +A ++L + ++ V V A +L G + WI + I+ G G G
Sbjct: 118 VVLGFVQAAGMA-FALRANNALVNNDFLSVFVVAIILTAGTCLLMWIGEQITAYGIGNGI 176
Query: 192 SLIICVGI---LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
SLII GI L ET+Y+ + G+ + F+ ++ + I + V VT+G R+
Sbjct: 177 SLIIFAGIVARLPDGLETIYQYIQN--GTINMFQAFLFAVIALAMIAVV--VAVTQGQRR 232
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY A ++P +N +G+ P++ + +L FP +A + + F
Sbjct: 233 IPIQY-----AKRVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSVLMFPVTIAQFIDNEF 287
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKMGARIPN 365
++ T + +YA +F+F F A N+ ++AD + K G IP
Sbjct: 288 VHKAADLFTWGTPLQT------ALYAILIFIFTYFYTAISINI-TDMADNMKKYGGFIPG 340
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSVLIIV 423
++ GK T +Y+ + G + L+++A I+ ++L I +G G T++LI+V
Sbjct: 341 IRAGKPTADYVDNVMTKITLAGAVFLAVVA----IIPNFLGSITGVQGVYFGGTALLIVV 396
Query: 424 GSIIELRRSYQA 435
G ++ + ++
Sbjct: 397 GVALDTMQQIES 408
>gi|222099987|ref|YP_002534555.1| preprotein translocase subunit SecY [Thermotoga neapolitana DSM
4359]
gi|221572377|gb|ACM23189.1| Preprotein translocase SecY subunit [Thermotoga neapolitana DSM
4359]
Length = 431
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 216/446 (48%), Gaps = 46/446 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDE 72
+F E+R R+ T + +++ R+G +IP+PG + RR+ ++ + D
Sbjct: 7 NAFKIPELRSRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDV 66
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
GA + S F + ++P I ASI++Q+L ++PSL ++ +EG +G +K +Y ++L
Sbjct: 67 FTG-GALSRFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAAYTRRLTL 125
Query: 133 GFAILEAVIVA---CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+A ++ S P + ++++ +++ ++ G M + W+ + I+E G G
Sbjct: 126 LIGGFQAFFISFSLARSNPDMVAPGVNALQFTILSTMSMLAGTMFLLWLGERITERGIGN 185
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRK 248
G S++I GI+ Y + + + L G ++ W F++ + ++T++ ++ V + R+
Sbjct: 186 GISILIFAGIVARYPSYIRR--AYLGGLNILEWIFLIAI----ALITIFGIILVQQAERR 239
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY A Y+P +N G+ P++ + +++ PS +ASI S
Sbjct: 240 ITIQY-----ARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNS-- 292
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFN------IFDIANLPKEIADYLNKMGAR 362
+ +K + A ++Y IY VF F IFD P+EI+ + K G
Sbjct: 293 -ETLKSLFR------AGGFLYLLIYGLLVFFFTYFYSVVIFD----PREISSNIQKYGGY 341
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
+P ++PG+ T +YL ++ F G + L +A ++ I IG TS LI
Sbjct: 342 VPGLRPGRPTEQYLHRVLNRVTFIGAIFLVAIALLPYLVQG---AIKVNVWIGGTSALIA 398
Query: 423 VGSIIELRRSYQAYNVMPSLSKALRR 448
VG +++ + + + VM L++
Sbjct: 399 VGVALDIIQQMETHMVMRHYEGFLKK 424
>gi|224142301|ref|XP_002324497.1| SecY protein [Populus trichocarpa]
gi|222865931|gb|EEF03062.1| SecY protein [Populus trichocarpa]
Length = 478
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 196/432 (45%), Gaps = 50/432 (11%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL----IPQDYL-----SFVSGSVDE 72
FFK + + + +SR+G +IPL G ++ + Q+ L SF G +
Sbjct: 59 DFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNQEAFAGNLDQNSLLSTLDSFSGGGIGR 118
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 131
LG LGI P I A I+ Q+L I P L L+K EG G +K+ Y + S
Sbjct: 119 LG---------ICSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKLLQYTRYAS 169
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+GFAI++A+ Y PY + + V+ + LL G++ ++I + IS+ G G+
Sbjct: 170 VGFAIVQAIGQVLYLRPY---VDDFNTQWVLTSVTLLTLGSVFTTYIGERISDLKLGNGT 226
Query: 192 SLIICVGILT------GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
SL+I I++ G T +G + F L +LG+ V V E
Sbjct: 227 SLLIFTSIISYLPASFGRTAAEAFQDGNYVGLGTIIFSFFLLVLGI--------VYVQEA 278
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
RK+ L Y AS S + Y+PF +N SG+ P++ +T LA P LA G
Sbjct: 279 ERKIPLNY-----ASRYTSRSGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG 333
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIY--AFFVFLFNIFDIANLPKEIADYLNKMGARI 363
+ LNP G ++ I AFF + + + P ++++ L + GA I
Sbjct: 334 ISALKKAALALNP----GGSFYLPTNILLIAFFNYYYTFLQLD--PDDVSEQLKRQGASI 387
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P V+PGK+T +L + + G L+ILA ++++ + + TSVLI+V
Sbjct: 388 PLVRPGKSTAAFLKTVLSRISVLGSAFLAILAAGPSVIEQ-ISHLTAFRGFAGTSVLILV 446
Query: 424 GSIIELRRSYQA 435
G + R QA
Sbjct: 447 GCATDTARKVQA 458
>gi|116624182|ref|YP_826338.1| protein translocase subunit SecY/sec61 alpha [Candidatus Solibacter
usitatus Ellin6076]
gi|116227344|gb|ABJ86053.1| protein translocase subunit secY/sec61 alpha [Candidatus Solibacter
usitatus Ellin6076]
Length = 463
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 218/458 (47%), Gaps = 42/458 (9%)
Query: 12 LSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD 71
++ +L A F ++R+RL T L+ + R+G IP PG + + +++ S +GS+
Sbjct: 1 MNKLLEAFANIFRVPDLRKRLMFTLGLLAVYRLGGHIPTPGINIQRW-EEFFSSNAGSIF 59
Query: 72 ELGDF--GAELK-LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
D G +K L+ F LGI P I ASI++Q+L +VP+L +L+KEG G KI +
Sbjct: 60 GFFDLFAGGNIKRLTVFALGIMPYITASIILQLLTVVVPTLEKLQKEGELGRRKITQWTR 119
Query: 129 WISLGFAILEAVIVA--CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
++++ +IL++ ++ + I + + V +T L G + W+ + ISE G
Sbjct: 120 YLTIILSILQSFGISQGLMGMQQGI-VINPGIGFVFLTILSLTTGTAFIMWLGEQISERG 178
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP--FMLGLLGVFTIVTMWAVVVTE 244
G G SLII GI+ G + + + ++ W ++ L+ + V + V+V
Sbjct: 179 VGNGMSLIIFTGIVVGLPNAIANIYQHVF--TIHDWGAITLIVLMALMVAVVAFIVLVER 236
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
G R++ +QY A + ++P +N G+ PV+ + +LAFP LA
Sbjct: 237 GERRIPVQY-----AKRVVGRRVMGGQSTHMPLKVNAGGVIPVIFASSILAFPQTLAQF- 290
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGAR 362
+ +++ + ++ +YY ++ + F F ++ + P E AD + K G
Sbjct: 291 --GWVKNLPWLSKTLATIQHGEPMYYVLFVAGIIFFCFFYVSIIFNPNEAADNMRKYGGF 348
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILD-----HYL------------ 405
IP ++PG+ T +Y+ I GG+ L+IL I+ H+L
Sbjct: 349 IPGIRPGRNTADYMNNILTKITVVGGIYLAILCLIPDIMISGIKLHHLWLVGDWIDRVAP 408
Query: 406 RRINEGFSIGF----TSVLIIVGSIIELRRSYQAYNVM 439
R I EG + F TS+LI+VG ++ +A +M
Sbjct: 409 RFILEGLGVNFYFGGTSLLIVVGVAMDTINQIEAQLIM 446
>gi|408355506|ref|YP_006844037.1| preprotein translocase subunit SecY [Amphibacillus xylanus NBRC
15112]
gi|407726277|dbj|BAM46275.1| preprotein translocase SecY subunit [Amphibacillus xylanus NBRC
15112]
Length = 431
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 201/433 (46%), Gaps = 37/433 (8%)
Query: 21 ESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP-QDYLSFVSGSVDELGDFGA 78
+FF+ EIR ++ T +++++ RIG FIP+P DR I + V G ++ G GA
Sbjct: 6 SNFFRVKEIRSKIIFTLLMLIVFRIGTFIPVPFTDRTAIKFMNDQQNVFGFLNTFGG-GA 64
Query: 79 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
S +GI P I ASI+MQ+L IVP + + +G G K+ + ++ A +
Sbjct: 65 LKNFSILAMGIMPYITASIIMQLLQMDIVPKFTEWKNQGEMGRRKLAQVTRYATIVLAFI 124
Query: 138 EAVIVAC--YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+A+ +A ++ S ++ A +L G + W+ + I+ G G G S+II
Sbjct: 125 QAIAMAIGFNAMTGGGLITDPSAAKFIIIAIVLTAGTAFLMWLGEQITAHGVGNGISIII 184
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA----------VVVTEG 245
GI+ T+ ++ Q G+ V GL IV++ A + + +
Sbjct: 185 FAGIVAAVPNTMNQLFVQYFGAHVGD-----GLFLNVVIVSLIALVVLGVTVGVIFIQQA 239
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
RK+ +QY A S + ++P +N +G+ PV+ + + P +A
Sbjct: 240 TRKIPIQY-----AKRMVNRSMVGGQSTHLPLKVNTAGVIPVIFSVSFIMAPRTIAGFFD 294
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
F ++ I + +G +V I + + F + + P+++AD L K G IP
Sbjct: 295 GNFANTIETIFDHTQPIGMIIYVVLIIAFSYFYTF----VQSNPEQMADNLKKQGGYIPG 350
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN---EGFSIGFTSVLII 422
++PGK T YLT + F G L L+ +A +L +L R+ + IG TS+LI+
Sbjct: 351 IRPGKRTERYLTVVLYRLTFVGALFLAAVA----VLPIFLGRVANLPQSIQIGGTSILIV 406
Query: 423 VGSIIELRRSYQA 435
VG ++ + ++
Sbjct: 407 VGVALQTMKQLES 419
>gi|255020785|ref|ZP_05292843.1| Preprotein translocase secY subunit [Acidithiobacillus caldus ATCC
51756]
gi|340781366|ref|YP_004747973.1| preprotein translocase subunit SecY [Acidithiobacillus caldus SM-1]
gi|254969781|gb|EET27285.1| Preprotein translocase secY subunit [Acidithiobacillus caldus ATCC
51756]
gi|340555519|gb|AEK57273.1| Preprotein translocase secY subunit [Acidithiobacillus caldus SM-1]
Length = 443
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 217/456 (47%), Gaps = 48/456 (10%)
Query: 16 LNNAAESFFK-SEIRRR-LFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE- 72
+ NAA+ K +E+R R LF+ L+V RIG IP+PG D P +F +
Sbjct: 7 IGNAAQGAGKITELRNRILFLLGALLVF-RIGAHIPVPGID----PAAMAAFFNQQRGTI 61
Query: 73 LGDF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 127
LG F GA +L+ F LGI P I ASI+ Q+ +VP + +L+KEG G KI Y
Sbjct: 62 LGMFNMFSGGALSRLTVFALGIMPYISASIIFQLAGSVVPKIEELKKEGEAGRRKIMEYT 121
Query: 128 WWISLGFAILEAVIVACY-------SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICD 180
+ ++ ++L+ + +A +LP I + + T L G + + WI +
Sbjct: 122 RYATVVLSLLQGLGIAVAIEKMHAGNLPVVI---DPGIGFLFTTTISLAAGTVFLMWIGE 178
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I+E G G G S+II GI+ G E + L + ++ P + +L + + + V
Sbjct: 179 QITERGIGNGISMIIFAGIVAGLPEAIGTTFE--LMRTGQYQPLFVLMLFILALAVLAFV 236
Query: 241 VVTEGC-RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V E R++ +QY ++ ++P +N SG+ P + + ++ P+
Sbjct: 237 VFMESAQRRIPIQYAKRQVGRKIYGGQ-----STHMPLKVNMSGVIPPIFASSIILLPAT 291
Query: 300 L----ASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIA 353
L A++ G + + L+P ++ +Y ++ + F F A + P+E A
Sbjct: 292 LSGWFANVPGMEWLARFGQALSPGST------LYVVVFTVAIVFFAFFYTAMVFNPRETA 345
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILA-TSSTILDHYLRRINEGF 412
D L K GA +P ++PG+ T +Y+ ++ + WG + L+++ ++ HY N F
Sbjct: 346 DNLKKSGAFVPGIRPGEQTAKYMDRVLSRLTLWGAIYLTLVCLLPEFLIVHY----NVPF 401
Query: 413 SIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
G TS+LI+V +++L Q++ + LR+
Sbjct: 402 YFGGTSLLIVVVVMMDLMAQIQSHLLTHQYEGLLRK 437
>gi|383639951|ref|ZP_09952357.1| preprotein translocase subunit SecY [Streptomyces chartreusis NRRL
12338]
Length = 437
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 212/438 (48%), Gaps = 30/438 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDE 72
+L A +F ++R++L T +IV+ R+G IP+PG D R + D G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVVYRVGTHIPIPGVDYRNVQTCIDAAQANQGLFGL 60
Query: 73 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
+ F GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYL 120
Query: 131 SLGFAILEAVIVACYSLPYSIY----AASHSV--KHVMVTAFLLV---CGAMTMSWICDT 181
++ AIL+ + + +++ AS V + + VT +++ G + W+ +
Sbjct: 121 TVALAILQGTGLVATARSGALFQGCPVASQIVPDQSIFVTITMVITMTAGTAFVMWLGEL 180
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
I++ G G G S+++ + I + L+ + Q GS W ++ V ++ V
Sbjct: 181 ITDRGIGNGMSILMFISIAATFPSALWAIKEQ--GSLAGGWIEFGTVIAVGLVMVGLVVF 238
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++A
Sbjct: 239 VEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIA 293
Query: 302 SIL-GSPFWQHVKEILNPETSVGARPWV---YYTIYAFFVFLFNIFDIANLPKEIADYLN 357
G+ W K + G P+ Y+ + FF F + I+ P+E+AD +
Sbjct: 294 QFAGGTSGW---KTWIEQHFVKGDHPYYIISYFLLIVFFAFFY--VAISFNPEEVADNMK 348
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G T
Sbjct: 349 KYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALVGFGA-NQNFPFGGT 407
Query: 418 SVLIIVGSIIELRRSYQA 435
S+LIIVG +E + ++
Sbjct: 408 SILIIVGVGLETVKQIES 425
>gi|344201989|ref|YP_004787132.1| preprotein translocase subunit SecY [Muricauda ruestringensis DSM
13258]
gi|343953911|gb|AEM69710.1| preprotein translocase, SecY subunit [Muricauda ruestringensis DSM
13258]
Length = 447
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 203/421 (48%), Gaps = 17/421 (4%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
E+R+R+ +T L+++ R G + LPG D + + +G + L F GA S
Sbjct: 15 DELRQRIILTLGLLLVYRFGAQVVLPGIDTTQLAELSSQTENGILGILNAFTGGAFANAS 74
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI-- 141
F LGI P I ASI++Q++ +P L +L+KEG G + I W+++G I++A
Sbjct: 75 VFALGIMPYISASIVVQLMGIAIPYLQKLQKEGESGRKTINQITRWLTIGICIVQAPAYL 134
Query: 142 --VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
+ +P S + + ++ +LV G + W+ + I++ G G G SL+I VGI
Sbjct: 135 YGLGALGVPDSAFVLGKGLDFIVPAVIILVTGCVFAMWLGEKITDKGIGNGISLLIMVGI 194
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 259
+ + + ++ FML + V+ +V + +V +T R++ +Q Y + A
Sbjct: 195 IATLPQAFAQEFVSRTTNNTGGIMFMLIEVIVWFLVILASVYLTMAVRQIPVQ-YARRTA 253
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 319
S E + + YIP +N SG+ P++ ++ PS++ E+ +
Sbjct: 254 SGGYEKN-VMGARQYIPLKLNASGVMPIIFAQAIMFAPSLIGRTFNDTAAGQWMEVQFAD 312
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFDIA-NLP-KEIADYLNKMGARIPNVKPGKATIEYLT 377
Y ++A + +F F A +P ++AD L + G IP ++PGK T YL
Sbjct: 313 IF----GLAYNILFAVLIIIFTYFYTAITVPTNKMADDLKRSGGFIPGIRPGKETGNYLD 368
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQA 435
KI + G + L++LA ++ L + G+++ G TS+LI+VG I+ + +
Sbjct: 369 KIMSLITLPGSVFLAMLAVLPAVVVK-LMDVQAGWALFYGGTSLLIMVGVAIDTVQQVNS 427
Query: 436 Y 436
Y
Sbjct: 428 Y 428
>gi|78211910|ref|YP_380689.1| preprotein translocase subunit SecY [Synechococcus sp. CC9605]
gi|78196369|gb|ABB34134.1| SecY protein [Synechococcus sp. CC9605]
Length = 439
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 189/398 (47%), Gaps = 21/398 (5%)
Query: 47 FIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCH 104
+IP+PG DR Q D + G +D G L F LGI P I ASI++Q+L
Sbjct: 43 YIPMPGIDREAFKQFIDQGGQLIGFLDIFTGGGIS-TLGIFALGILPFINASIILQLLTA 101
Query: 105 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 163
+P L L+K EG G KI +++LG+ ++++V+ A Y++ S V V+
Sbjct: 102 ALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLVQSVVFAMILRQYAVEGLSE-VTFVVQ 160
Query: 164 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP 223
TA LV G+M + W+ + I+E G GQG+SL+I + I+ TL +
Sbjct: 161 TALALVTGSMVVMWLSEVITERGIGQGASLVIFLNIVATLPRTLGATIEAAQTGDRDTVL 220
Query: 224 FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE-DSP--ITEVEPYIPFNIN 280
++ L+ VF + + V EG R++ + SA R+ P + + Y+P +N
Sbjct: 221 GIIVLVLVFLATIVGIIFVQEGARRI-------PIVSAKRQVGGPGVLPTRQSYLPLKLN 273
Query: 281 PSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 340
G+ P++ + L+ P +A++ S + LNP A PW Y + + F
Sbjct: 274 AGGVMPIIFASALIFLPVTIANLTKSEWLIRAASALNPGA---ANPWPYALTFFALILGF 330
Query: 341 NIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSS 398
+ F + P +IA L + G IP V+PG AT YL+ +Q GGL L +A
Sbjct: 331 SYFYSSLTVNPSDIATNLKRGGVAIPGVRPGSATATYLSGVQNRLTLLGGLFLGAVAIIP 390
Query: 399 TILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
++ + +G TS+LI+VG I+ + Q Y
Sbjct: 391 AAVERA-TNVQTFQGLGATSLLILVGVAIDTAKQVQTY 427
>gi|389703891|ref|ZP_10185685.1| preprotein translocase subunit SecY [Acinetobacter sp. HA]
gi|388611273|gb|EIM40377.1| preprotein translocase subunit SecY [Acinetobacter sp. HA]
Length = 452
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 211/433 (48%), Gaps = 44/433 (10%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR +F+ L+V R+G IP+PG + + ++ + G++ LG F GA
Sbjct: 23 YREIIRRMMFLIGALLVF-RLGAHIPVPGINNAAL-ENLFNANQGTI--LGLFNMFSGGA 78
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y +L A ++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRQGTLFLAFVQ 138
Query: 139 AVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
AV + + I S +V VT+ LV G M + W+ + I+E G G G S+II
Sbjct: 139 AVGMCAGLISQGITLTSGLAFYVPAVTS--LVAGTMFLMWLGEQITERGVGNGISMIIFA 196
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGC-RKVKLQYY 254
GI+ G L ++ Q L S ++GL + +I + A+V E R++ + Y
Sbjct: 197 GIVAG----LPTLVMQSLTSVDNGQSSLIGLAIFALLSIAVLAAIVFIEKAQRRIPVNY- 251
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP------- 307
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ----AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADPDAGII 307
Query: 308 --FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARI 363
Q + +L+P +P +Y ++ + F F A + PKE+++ L + GA +
Sbjct: 308 KRSLQDLALVLSP-----GQP-LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYV 361
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PG+ T YL I F G + ++++ IL FS+G TS+LI+V
Sbjct: 362 PGIRPGEQTARYLDHILNRLTFIGAIYITVICLMPMILQ---SSFGIPFSLGGTSLLIVV 418
Query: 424 GSIIELRRSYQAY 436
+++ QA+
Sbjct: 419 VVVMDFMAQLQAH 431
>gi|347534763|ref|YP_004841433.1| preprotein translocase subunit secY [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345504819|gb|AEN99501.1| Preprotein translocase subunit secY [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 441
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 216/430 (50%), Gaps = 34/430 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ +F IR+++ T +++ I R+G +I +PG D + + Q+ S SG V+ L
Sbjct: 1 MLSTLKSAFGDKSIRKKILFTLLVLAIFRLGAYITVPGVDAKAL-QEVAS--SGLVNVLN 57
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
F G S F +G+SP I A I++Q+L IVP V+ K+G G K+ ++
Sbjct: 58 IFSGGGLTNYSIFAMGVSPYITAQIVVQLLQMDIVPKFVEWGKQGEVGRLKLDKVTRRLT 117
Query: 132 LGFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+ A +++ I A ++ S++ + + +L G M +W+ D I++ G GQ
Sbjct: 118 IVLAFAQSIGITAGFNALSSLHLVENPGIATYASIGLILTAGTMLTTWMGDMITDKGIGQ 177
Query: 190 GSSLIICVGIL----TGYTETLYKMLSQLLGSSVRWWP--FMLGLLGVFTIVTMWAVVVT 243
G S+II GI+ TG+ E LY+ Q +S W P F++GL+ ++ + V
Sbjct: 178 GVSMIIFAGIVANIPTGF-EGLYRQYIQGTPTSDLWQPALFVVGLIIAMLVIVTFVTWVQ 236
Query: 244 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
+ R++ +QY + A+ + + S Y+P +N +G+ PV+ + ++ P +
Sbjct: 237 QAERRIPIQYT--RRATGSAKSS-------YLPLKVNVAGVIPVIFASAFISTPQTILMF 287
Query: 304 L----GSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNK 358
GS W + + E+ N +T +GA +YT+ F F N P+++++ L K
Sbjct: 288 FTKNDGSKGWFKFMSELFNMQTPIGA---TFYTLLIVVFTFFYAFVQVN-PEKLSENLQK 343
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
G+ IP V PGK+T +++ + G L L I++ + + + +N +G T+
Sbjct: 344 QGSYIPGVWPGKSTQLFVSHLLMRLSTVGALFLGIVSLIPLVAQN-VWNLNSSIGLGGTN 402
Query: 419 VLIIVGSIIE 428
+LIIVG IE
Sbjct: 403 LLIIVGVAIE 412
>gi|303230112|ref|ZP_07316881.1| preprotein translocase, SecY subunit [Veillonella atypica
ACS-134-V-Col7a]
gi|303231271|ref|ZP_07318009.1| preprotein translocase, SecY subunit [Veillonella atypica
ACS-049-V-Sch6]
gi|302514178|gb|EFL56182.1| preprotein translocase, SecY subunit [Veillonella atypica
ACS-049-V-Sch6]
gi|302515173|gb|EFL57146.1| preprotein translocase, SecY subunit [Veillonella atypica
ACS-134-V-Col7a]
Length = 420
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 212/441 (48%), Gaps = 47/441 (10%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L++ + F +E+R ++ T ++ + R G IP+PG D +I F SG++ L
Sbjct: 1 MLDSLSNIFKITELRNKILYTLMMFAVFRAGIHIPVPGVDASVIES---LFTSGNLFGLL 57
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW-- 129
D GA K S F + I+P I ASI+MQ+L +VP K+G +G +KI +
Sbjct: 58 DLFAGGALSKFSIFAMSITPYINASIIMQLLQAVVPQFEAWSKDGEEGRKKIAKVTRYGT 117
Query: 130 ISLGFAILEAVIVACYSLPYSIYAASHSVKH----VMVTAFLLVCGAMTMSWICDTISES 185
+ LGF V + + +++ A S V + V V A +L G + WI + I+
Sbjct: 118 VVLGF-------VQAFGMAFALRANSALVNNDILSVFVVAIILTAGTCLLMWIGEQITAY 170
Query: 186 GFGQGSSLIICVGI---LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 242
G G G SLII GI L +T+Y+ + G+ + F+ ++ + I + V V
Sbjct: 171 GIGNGISLIIFAGIVARLPDGLQTIYQYIQT--GTINMFQAFLFAVIAIAMIAVV--VAV 226
Query: 243 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
T+G R++ +QY A ++P +N +G+ P++ + +L FP +A
Sbjct: 227 TQGQRRIPIQY-----AKRVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSVLMFPVTIAQ 281
Query: 303 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKM 359
+ + F + ++ T + +YA +F+F F A N+ ++AD + K
Sbjct: 282 FIENDFVHKIADLFTWGTPLQT------ALYAILIFIFTYFYTAISINI-TDMADNMKKY 334
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFT 417
G IP ++ GK T +Y+ + G + L+I+A I+ ++L I +G G T
Sbjct: 335 GGFIPGIRAGKPTADYVDNVMTKITLAGAVFLAIVA----IIPNFLGTITGVQGVYFGGT 390
Query: 418 SVLIIVGSIIELRRSYQAYNV 438
++LI+VG ++ + ++ V
Sbjct: 391 ALLIVVGVALDTMQQIESLMV 411
>gi|255262422|ref|ZP_05341764.1| preprotein translocase, SecY subunit [Thalassiobium sp. R2A62]
gi|255104757|gb|EET47431.1| preprotein translocase, SecY subunit [Thalassiobium sp. R2A62]
Length = 454
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 202/420 (48%), Gaps = 26/420 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAELKLS 83
+E+R+R+ T L+++ R+G +IP+PG D + Q D + G + + GA ++
Sbjct: 21 TELRQRILFTIGLLIVYRLGTYIPVPGIDGGALRQFMDDAAAGIGGILSMFTGGALSRMG 80
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q+L + L QL+KEG G +KI Y + ++ A +A +A
Sbjct: 81 IFALGIMPYISASIIIQLLSAMWEPLKQLKKEGEQGRKKINQYTRYGTVILATFQAYGLA 140
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
SL A+ + + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 141 A-SLEAGDLASDPGLYFRVACVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAEI 199
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLASAA 262
L + LSQ G S P ++ + + IVT+ VV E RKV +QY ++
Sbjct: 200 PAALAQFLSQ--GRSGAISPAVIIGIILMVIVTLTFVVFMERSLRKVHIQYPRRQVGMKV 257
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG---SPFWQHVKEILNPE 319
+ ++P +NP+G+ P + + LL P+ +++ G P + P
Sbjct: 258 YDGG-----SSHLPIKVNPAGVIPAIFASALLLLPTTISTFSGGQTGPVMSTILAYFGP- 311
Query: 320 TSVGARP--WVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
+P +++T F F ++A E+AD L +P ++PGK T EYL
Sbjct: 312 ----GQPLYLLFFTAMIMFFTFFYTKEVAFKTDEVADNLKNQNGFVPGIRPGKRTAEYLD 367
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ G L+++A +L LR +++ F G TS+LIIV ++ + Q++
Sbjct: 368 YVVTRILVLGASYLALVA----LLPEILRSQLSIPFYFGGTSILIIVSVGMDTIQQIQSH 423
>gi|386739737|ref|YP_006212917.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 31]
gi|384476431|gb|AFH90227.1| Preprotein translocase subunit secY [Corynebacterium
pseudotuberculosis 31]
Length = 396
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 187/402 (46%), Gaps = 38/402 (9%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-----ELGD 75
++F +++R+++ +T LIV+ RIG IP PG D I S S L
Sbjct: 6 QAFRDADLRKKILITLALIVLYRIGAQIPSPGVDYASISGRLRELTSDSSSVYSLINLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F +G+ P I ASI++Q+L ++P +L+KEG G K+ Y +++LG A
Sbjct: 66 GGALLQLSIFAIGVMPYITASIIVQLLTVVIPRFEELKKEGQSGQAKMDQYTRYLTLGLA 125
Query: 136 ILEAVIVACYSLPYSIYAASHSVKH-------VMVTAFLLVCGAMTMSWICDTISESGFG 188
+L++ + + + A V +++ ++ GAM + W+ + I+E G G
Sbjct: 126 LLQSSGIVALADRKQLLGAGVQVLMPNAGLWTLIMLVLVMSAGAMLVMWLGEIITERGVG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
G SL+I GI T +L+ G +L I+ + V V +G R+
Sbjct: 186 NGMSLLIFAGIATRLPSDGANILNSSGGVVFAV------VLVAVIILVVGVVFVEQGQRR 239
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-- 306
+ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 240 IPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIINSGS 294
Query: 307 -----PFWQ-HVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNK 358
+WQ +V + L +S W Y +Y + F+ F + P E A+ + K
Sbjct: 295 HEVSDSWWQRNVIQYLQTPSS-----WQYIVLYFVLIIFFSYFYVSVQYDPNEQAENMKK 349
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI 400
G IP ++PG+ T EYL + F G L L I+A I
Sbjct: 350 YGGFIPGIRPGRPTAEYLGFVMNRLLFVGALYLGIIAVLPNI 391
>gi|115376081|ref|ZP_01463326.1| preprotein translocase, SecY subunit [Stigmatella aurantiaca
DW4/3-1]
gi|115366896|gb|EAU65886.1| preprotein translocase, SecY subunit [Stigmatella aurantiaca
DW4/3-1]
Length = 400
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 182/383 (47%), Gaps = 50/383 (13%)
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA ++S F LGI P + ASI+MQ+L +VPSL +L+KEG G +KI Y + S+ ++
Sbjct: 20 GALEQMSIFGLGIMPYVSASIIMQLLAVVVPSLERLQKEGASGRQKINQYTRYGSIVLSV 79
Query: 137 LEAVIVACY--SLPYS---------IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 185
++ + ++ + SL S I S +T L G + W+ + I+E
Sbjct: 80 VQGIGISRWLASLGRSDAGQSGFNQIVVPDDSAWFTFMTVISLTAGTAFIMWLGERITER 139
Query: 186 GFGQGSSLIICVGILTGY---TETLYKMLSQ-------LLGSSVRWWPFMLGLLGVFTIV 235
G G G SLII GI+ G +TL M +Q L+G +V FML ++ V
Sbjct: 140 GIGNGISLIIFAGIVAGLLPNGKTLLDMTAQGAIEAAALVGLAV----FMLFIIAV---- 191
Query: 236 TMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLA 295
V V G R++ +QY A Y P +N SG+ P + LL+
Sbjct: 192 ---VVYVERGMRRIPVQY-----AKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGALLS 243
Query: 296 FPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIA 353
FP+ L + PF Q ++ L PW+Y ++ V F F A P ++A
Sbjct: 244 FPATLGTWF--PFLQTFRQGLE------GNPWLYNGLFVLLVIFFAYFYTALTFRPDDVA 295
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS 413
D + K G IP ++PG+ T +++ ++ F G + L+ + TIL +L+ F+
Sbjct: 296 DNIKKQGGYIPGIRPGRQTADFIERVLNRITFGGAIYLATICVIPTILTQWLQ---VPFA 352
Query: 414 IGFTSVLIIVGSIIELRRSYQAY 436
G T++LI+VG ++ + + +
Sbjct: 353 FGGTALLIVVGVALDTVQQIEGH 375
>gi|87300895|ref|ZP_01083737.1| preprotein translocase SecY [Synechococcus sp. WH 5701]
gi|87284766|gb|EAQ76718.1| preprotein translocase SecY [Synechococcus sp. WH 5701]
Length = 438
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 201/414 (48%), Gaps = 54/414 (13%)
Query: 47 FIPLPGFDRRLIPQDYLS----------FVSGSVDELGDFGAELKLSFFQLGISPQIVAS 96
+IP+PG DR Q F G + LG F LGI P I AS
Sbjct: 43 YIPVPGIDRVAFQQFIQQGGQLIGFLDIFTGGGISTLG---------VFALGILPFINAS 93
Query: 97 ILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAAS 155
I++Q+L +P L L+K EG G KI +++LG+ +L++ + A Y++
Sbjct: 94 IILQLLTAALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLLQSTVFALILRQYALPGIP 153
Query: 156 HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLL 215
V V+ T LV GAM + WI + I+E G GQG+SL+I V I+ L + L
Sbjct: 154 MPV-FVIQTTLALVTGAMVVMWISEVITERGIGQGASLVIFVNIVA--------TLPRAL 204
Query: 216 GSSVRWWPF--------MLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAARE--D 265
GS+V+ ++ L+ +F + + + V EG R++ + SA R+
Sbjct: 205 GSTVKLAESGDRATIGGIVVLVLIFLVTIVGIIFVQEGSRRI-------PIVSAKRQVGQ 257
Query: 266 SPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGAR 325
+ + + Y+P +N G+ P++ + ++ P +A+I +P+ + LNP +S
Sbjct: 258 ASLASRQSYLPLKLNAGGVMPIIFASAVVFLPLTIANITRAPWLIQLAGYLNPNSST--- 314
Query: 326 PWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQAST 383
PW+Y I+ + F++F + P +IA L + G IP V+PG AT +YL+ +Q
Sbjct: 315 PWLYALIFFALICGFSLFYASLTINPIDIATNLKRGGVAIPGVRPGSATAQYLSGVQNRL 374
Query: 384 RFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
GGL L +A + ++ + R +G +G TS+LI+VG I+ + Q Y
Sbjct: 375 TLLGGLFLGAVAIIPSAVEGATQVRTFQG--LGATSLLILVGVAIDTAKQVQTY 426
>gi|410030854|ref|ZP_11280684.1| preprotein translocase subunit SecY [Marinilabilia sp. AK2]
Length = 440
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 207/431 (48%), Gaps = 39/431 (9%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE-LGDFGAELK 81
F ++R R+ T +V+ R+G FI LPG D + D + G +D LG GA
Sbjct: 12 FSIEDLRIRILNTIGFLVVFRLGSFIVLPGVDPSKL-GDAPEGIFGLIDTFLG--GAFSN 68
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV- 140
S F LGI P I ASI++Q+L VP +L+KEG G ++I +++ + + +
Sbjct: 69 ASIFGLGIMPYISASIVLQLLTVGVPYFQKLQKEGESGRKRINQITRVLTIAITVAQGIG 128
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP S S+ + + LL G M W+ + I+E G G G S++I +GI+
Sbjct: 129 YITATILPTGAVMVSTSL-FMFSSLVLLSAGTMFCMWLGEKITEKGIGNGISMLIMIGII 187
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGF 256
+ + + ++++L +L V V + V +TE R++ +QY G
Sbjct: 188 SRFPGAI---IAEVLSKGTSGMLLLLLEAAVLFFVVLGTVALTEATRRIPVQYAKQVVGG 244
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
K+ R+ YIP +N SG+ P++ L+ P+++A I W +I
Sbjct: 245 KVYGGQRQ---------YIPIKVNASGVMPIIFAQSLMFLPALIAQI-----WSAENDIA 290
Query: 317 N--PETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKAT 372
N T W Y ++A + LF F I P++IA+ L + G +P +KPG T
Sbjct: 291 NYIGSTFSDFTSWQYNLVFAIMIILFTFFYTAITVNPEQIAEDLKRNGGFVPGIKPGAPT 350
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHY--LRRINEGFS--IGFTSVLIIVGSIIE 428
+++ I + G +LLS++A IL + L + F+ G TS+LI+VG I++
Sbjct: 351 SDFIDNIISRITLPGSILLSVVA----ILPAFAILAGVGGEFAQFYGGTSLLIMVGVIMD 406
Query: 429 LRRSYQAYNVM 439
R ++Y +M
Sbjct: 407 TLRQIESYLLM 417
>gi|334128926|ref|ZP_08502802.1| preprotein translocase subunit SecY [Centipeda periodontii DSM
2778]
gi|333385953|gb|EGK57178.1| preprotein translocase subunit SecY [Centipeda periodontii DSM
2778]
Length = 419
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 211/435 (48%), Gaps = 34/435 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ F E+R+++ T ++ + R+G IP+PG D I Q F G++ L
Sbjct: 1 MLDALGNIFRIPELRQKIVFTLIMFAVFRMGTHIPVPGVDPTAIEQ---LFAQGTLFGLL 57
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
D GA K S F + I+P I A+I++Q+L +VP+L Q KEG +GH+K +++
Sbjct: 58 DLFSGGAFSKFSVFAMSITPYINAAIIIQLLNVVVPTLEQWSKEGAEGHKKTTKVTRYLT 117
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+ A +A+ S+ + + ++++ A L G + + W+ + I+ +G G G
Sbjct: 118 VALAFFQAI---GMSIGLKSAILNPNPMNILIIAITLTAGTVFLMWLGEQITANGVGNGI 174
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SLII GI+ + + + + + ++ ++ FM G++ + IV + + + G R+V
Sbjct: 175 SLIIFAGIVAALPKNIGTIYAYVKAGTISYFSVFMFGVIALAMIV--FVIHIETGFRRVP 232
Query: 251 LQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
+ Y G ++ ++ +IPF +N +G+ P++ + +L FP +A +
Sbjct: 233 ITYAKRLVGGRVGTSGHSS--------HIPFKVNQAGVIPIIFASSVLMFPITVAQFIDV 284
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPK--EIADYLNKMGARIP 364
P+ + L +P + T+Y + F F + K ++AD L K G +P
Sbjct: 285 PWIKTAATYLE-----WGKP-LQTTLYVLMIIFFTYFYTSVTVKIPDMADNLKKYGGFVP 338
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG+AT +YL + G L+ +A ++ +G G T++LI+VG
Sbjct: 339 GLRPGQATADYLDYVLTRITLAGAFFLAFIAVLPNLIASATNI--QGVYFGGTALLIVVG 396
Query: 425 SIIELRRSYQAYNVM 439
++ + ++ VM
Sbjct: 397 VALQTMKQIESMVVM 411
>gi|227549860|ref|ZP_03979909.1| preprotein translocase subunit SecY [Corynebacterium
lipophiloflavum DSM 44291]
gi|227078115|gb|EEI16078.1| preprotein translocase subunit SecY [Corynebacterium
lipophiloflavum DSM 44291]
Length = 442
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 194/401 (48%), Gaps = 45/401 (11%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG------SVDELG 74
++F +++R+++ +T L+V+ R+G IP PG D LI G S+ L
Sbjct: 6 QAFRDADLRKKILITLALLVLYRVGAQIPTPGVDYALISARLNEVSQGDQATMFSIIGLF 65
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+LS F +GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++G
Sbjct: 66 SGGALLQLSIFAIGIMPYITASIIVQLLTVVIPRFEELKKEGQAGQTKMTQYTRYLTVGL 125
Query: 135 AILE-AVIVAC--------YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 185
A+L+ A IVA +P I ++ +++ ++ GA+ + W+ + I+E
Sbjct: 126 ALLQSAGIVALADREQLLGQGMP--ILVEDRTIWTLIMMIIVMTSGAVLIMWLGEIITEK 183
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G G SL+I GI T +L Q G + F L +L ++ + + V +G
Sbjct: 184 GVGNGMSLLIFAGIATQIPAQGAIILEQSGGVT-----FGL-VLAALIVLVVGIIFVEQG 237
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI-- 303
R++ +QY + S Y+P +N +G+ PV+ + LL P ++ I
Sbjct: 238 QRRIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLLYVPILITQIVT 292
Query: 304 LGSP-----FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIAD 354
+ +P +W + + + NP + W Y IY + F+ F I P E AD
Sbjct: 293 MNNPTPPDNWWMNNVMAWLQNPGS------WQYILIYFAMIIFFSYFYVSIQYDPVEQAD 346
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILA 395
+ K G IP ++PG+ T +YL + F G L L ++A
Sbjct: 347 NMKKYGGFIPGIRPGRPTAQYLAFVMNRLLFVGALYLGLIA 387
>gi|149915865|ref|ZP_01904389.1| preprotein translocase, SecY subunit [Roseobacter sp. AzwK-3b]
gi|149810188|gb|EDM70034.1| preprotein translocase, SecY subunit [Roseobacter sp. AzwK-3b]
Length = 449
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 208/434 (47%), Gaps = 35/434 (8%)
Query: 17 NNAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 75
N + +F K +++R+R+ T L+++ R+G +IP+PG D + +F+ G+ +G
Sbjct: 4 NTSWSAFGKATDLRKRIVFTLGLLIVYRLGTYIPVPGIDG----AELRNFMEGAAASIGG 59
Query: 76 F------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA ++ F LGI P I ASI++Q+L +VP+L QL+KEG G +KI Y +
Sbjct: 60 MLSMFTGGALGRMGIFALGIMPYISASIIVQLLAAMVPALEQLKKEGEQGRKKINQYTRY 119
Query: 130 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
++ A L++ +A SL + + LV G M + W+ + I+ G G
Sbjct: 120 GTVFLATLQSYGLAV-SLQSGGLVTDPGLFFIASCMITLVGGTMFLMWLGEQITARGVGN 178
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRK 248
G SLII VGI+ L + SQ G S P ++ + + I + VV E RK
Sbjct: 179 GISLIIFVGIIAEVPAALAQFFSQ--GRSGAISPAVIIGVIIMVIAVIAFVVFMERSLRK 236
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--- 305
+ +QY ++ + ++P +NP+G+ P + + LL P+ +++ G
Sbjct: 237 IHIQYPRRQVGMKVYDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPATISTFSGNET 291
Query: 306 SPFWQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 363
SP + P +P +++T+ F F ++++ P ++AD L +
Sbjct: 292 SPIMSTIMAYFGP-----GQPAYLLFFTVMIVFFTYFYTYNVSFKPDDVADNLKNQNGFV 346
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLII 422
P V+PGK T EYL + + G L+ + +L LR + F G TSVLI+
Sbjct: 347 PGVRPGKKTAEYLEYVVSRILVLGSGYLAAVC----LLPEILRGQFAIPFYFGGTSVLIV 402
Query: 423 VGSIIELRRSYQAY 436
V ++ + Q++
Sbjct: 403 VSVTMDTIQQVQSH 416
>gi|344206201|ref|YP_004791342.1| preprotein translocase subunit SecY [Stenotrophomonas maltophilia
JV3]
gi|343777563|gb|AEM50116.1| preprotein translocase, SecY subunit [Stenotrophomonas maltophilia
JV3]
Length = 455
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 204/431 (47%), Gaps = 38/431 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV----SGSVDELGDF--GAE 79
+E+R+RL +++ RIG ++P+PG + P L+ + G VD F GA
Sbjct: 17 TELRQRLLFVVGALIVYRIGCYVPVPGVN----PDAMLAMMQQQGGGIVDMFNMFSGGAL 72
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+ S F L + P I ASI+MQ+ HI P+L ++KEG G KI Y ++ A+++
Sbjct: 73 HRFSIFALNVMPYISASIVMQLAVHIFPALKAMQKEGESGRRKITQYSRIGAVLLAVVQG 132
Query: 140 VIVACYSLPYSIYAASHSVKH------VMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
+A +L + + V + V+ L G M + W+ + ++E G G G SL
Sbjct: 133 GSIAL-ALQGQVSPSGAPVVYAPGMGFVLTAVVALTAGTMFLMWVGEQVTERGIGNGVSL 191
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
II GI+ G + ++++ +L + V T + V V G R++ + Y
Sbjct: 192 IIFAGIVAGLPGAVIHTFDAYRDGNIQFIQLLLIAIVVLAF-TFFVVFVERGQRRITVNY 250
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-----SPF 308
A + ++P +N +G+ P + + LLAFP+ LA G S F
Sbjct: 251 -----ARRQGGRNAYMNQTSFLPLKLNMAGVIPAIFASSLLAFPATLAMWSGQAANQSSF 305
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNV 366
Q ++++ N ++G ++ ++A + F F A + +E AD L K GA IP +
Sbjct: 306 GQVLQKVAN---ALGPGEPLHMIVFAALITGFAFFYTALVFNSQETADNLKKSGALIPGI 362
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGS 425
+PGKAT +Y+ + G L I+ +L +R ++N F G TS+LI+V
Sbjct: 363 RPGKATADYIDGVLTRLTAAGSAYLVIV----CLLPELMRTQLNASFYFGGTSLLIVVVV 418
Query: 426 IIELRRSYQAY 436
+++ QA+
Sbjct: 419 VMDFIAQVQAH 429
>gi|317050548|ref|YP_004111664.1| preprotein translocase subunit SecY [Desulfurispirillum indicum S5]
gi|316945632|gb|ADU65108.1| preprotein translocase, SecY subunit [Desulfurispirillum indicum
S5]
Length = 433
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 207/430 (48%), Gaps = 46/430 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 80
++R+++ T ++ + R+G IPLPG D PQ F S L F GA
Sbjct: 13 DLRKKVLFTLGVLAVYRLGAHIPLPGID----PQALSEFFSAQSSALLTFFDMFSGGALG 68
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL------GF 134
+++ F LG+ P I ASI++Q++ +VP+L +L+KE DG +KI Y + ++ G+
Sbjct: 69 RVTLFALGVIPYISASIVLQLMTVVVPALEKLKKEP-DGQKKITEYTRYATVVLAFVQGY 127
Query: 135 AI---LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
I LEA + + +P +Y ++TA L G + W+ + ++E G G G
Sbjct: 128 GIGIGLEA-MTSPSGMPIVMYGG---FSFQLMTAISLAAGTTFLMWLGEQVTERGVGNGI 183
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV--TEGCRKV 249
SL+I GI+ + + + L + + LGL VF + M A +V G RK+
Sbjct: 184 SLLIFAGIVAAIPGAIVQSYTLLQSGEMSIF-LALGL--VFAALFMIAAIVFIERGQRKI 240
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-SPF 308
+ Y A + YIP +N +G+ PV+ + ++AFP +L +P
Sbjct: 241 PVAY-----AKRMVSGKVVGGKNTYIPLKVNTAGVIPVIFASSIIAFPLTFGDMLERTPN 295
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNV 366
+ ++ +P W+Y + A F+ F F A + K++A+ L K G IP++
Sbjct: 296 VEMFMQLFSPGG------WLYTGLLAAFIIFFCYFYTAIIFNTKDVAENLRKNGGYIPSI 349
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PG T YL + + F G L L+++A S T L YL + F G T++LI+V
Sbjct: 350 RPGAETSMYLDNVLSRLTFGGSLYLTLVAVSPTFLIKYL---SVPFYFGGTALLIVVSVG 406
Query: 427 IELRRSYQAY 436
++ +A+
Sbjct: 407 MDTMNQIEAH 416
>gi|359455881|ref|ZP_09245087.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20495]
gi|414070182|ref|ZP_11406170.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
Bsw20308]
gi|358047185|dbj|GAA81336.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20495]
gi|410807487|gb|EKS13465.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
Bsw20308]
Length = 442
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 205/443 (46%), Gaps = 44/443 (9%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++RRL I+I R+G F+P+PG D ++ D+ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVL-ADFFEQQKGTIVEMFNMFSGGALERA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI+ Q+L H+ P ++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIITQLLTHMYPPFIELKKEGEQGRKKISQYTRYGTLVLATIQSIGI 134
Query: 143 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A SLP + + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-SLPGMMEGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWP------FMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY 253
L +GS+V F+L ++ V + VV E G R++ + Y
Sbjct: 194 AN--------LPSAIGSTVEMARQGDLNVFVLLMVAVIVFAVTYLVVFFERGQRRIVVNY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SP 307
A + ++P +N +G+ P + + ++ FP +AS G +
Sbjct: 246 -----AKRQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVAD 300
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPN 365
Q V L P +P +Y + A + F F A + P+E AD L K GA IP
Sbjct: 301 VLQAVATTLTP-----GQP-LYSLVLAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPG 354
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+ K+ G L ++ + + + F G TS+LIIV
Sbjct: 355 IRPGEQTSKYIDKVMTRLTLAGALYITFICLVPEFMTMAWQ---TPFYFGGTSILIIVVV 411
Query: 426 IIELRRSYQAYNVMPSLSKALRR 448
I++ Q + + L++
Sbjct: 412 IMDFMAQVQTHLMSHQYDSVLKK 434
>gi|260435196|ref|ZP_05789166.1| preprotein translocase, SecY subunit [Synechococcus sp. WH 8109]
gi|260413070|gb|EEX06366.1| preprotein translocase, SecY subunit [Synechococcus sp. WH 8109]
Length = 439
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 187/395 (47%), Gaps = 15/395 (3%)
Query: 47 FIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCH 104
+IP+PG DR Q D + G +D G L F LGI P I ASI++Q+L
Sbjct: 43 YIPMPGIDREAFKQFIDQGGQLIGFLDIFTGGGIS-TLGIFALGILPFINASIILQLLTA 101
Query: 105 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 163
+P L L+K EG G KI +++LG+ ++++V+ A Y++ S V V+
Sbjct: 102 ALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLVQSVVFAMILRQYAVEGLSE-VAFVVQ 160
Query: 164 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWP 223
TA LV G+M + W+ + I+E G GQG+SL+I + I+ TL +
Sbjct: 161 TALALVTGSMVVMWLSEVITERGIGQGASLVIFLNIVATLPRTLGATIEAAQTGDRDTVL 220
Query: 224 FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSG 283
++ L+ VF + + V EG R++ + ++ A + + Y+P +N G
Sbjct: 221 GIIVLVLVFLATIVGIIFVQEGARRIPIVSAKRQVGGAGV----LPTRQSYLPLKLNAGG 276
Query: 284 MQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF 343
+ P++ + L+ P +A++ S + LNP A PW Y + + F+ F
Sbjct: 277 VMPIIFASALIFLPVTIANLTKSEWLIRAASALNPGA---ANPWPYALTFFALILGFSYF 333
Query: 344 --DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTIL 401
+ P +IA L + G IP V+PG AT YL+ +Q GGL L +A +
Sbjct: 334 YASLTVNPADIATNLKRGGVAIPGVRPGSATATYLSGVQNRLTLLGGLFLGAVAIIPAAV 393
Query: 402 DHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ + +G TS+LI+VG I+ + Q Y
Sbjct: 394 ERA-TNVQTFQGLGATSLLILVGVAIDTAKQVQTY 427
>gi|313889577|ref|ZP_07823222.1| preprotein translocase, SecY subunit [Streptococcus pseudoporcinus
SPIN 20026]
gi|416853044|ref|ZP_11910189.1| preprotein translocase, SecY subunit [Streptococcus pseudoporcinus
LQ 940-04]
gi|313122086|gb|EFR45180.1| preprotein translocase, SecY subunit [Streptococcus pseudoporcinus
SPIN 20026]
gi|356740533|gb|EHI65765.1| preprotein translocase, SecY subunit [Streptococcus pseudoporcinus
LQ 940-04]
Length = 434
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 220/439 (50%), Gaps = 63/439 (14%)
Query: 28 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 80
+R+++ T +I+I RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 15 VRQKILYTIFIILIFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AMR 66
Query: 81 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISLG A +++
Sbjct: 67 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLGLAFIQS 126
Query: 140 V-IVACY-SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ I A + SL ++ +VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 127 IGITAGFNSLSNVALVSTPNVKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIFA 186
Query: 198 GILTGYTE---TLYK-MLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-----VTEGCRK 248
GI++ T+Y+ + ++ +G+L IV + A+V V + K
Sbjct: 187 GIISSIPNAIATVYEDYFVNVKAGDIQSSYLAVGIL----IVAVLAIVFFTTFVQQAEYK 242
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY KL A S Y+P +NP+G+ PV+ + + PS L PF
Sbjct: 243 IPIQYT--KLVQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTLI-----PF 288
Query: 309 WQH---------VKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLN 357
+Q+ +++ILN ++ G +YAF + LF+ F + P++ A+ L
Sbjct: 289 FQNGRDIPWLTKLQDILNYQSPTG------MIVYAFLIILFSFFYTFVQVNPEKTAENLQ 342
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K + IP+V+PG+ T Y++ + G + L+ ++ I + ++ G ++G T
Sbjct: 343 KNSSYIPSVRPGRETELYMSSLLKKLATLGSIFLAFISLVP-IAAQQILNLSSGIALGGT 401
Query: 418 SVLIIVGSIIELRRSYQAY 436
S+LI++ + IE + + Y
Sbjct: 402 SLLILISTGIEGMKQLEGY 420
>gi|419852233|ref|ZP_14375126.1| preprotein translocase, SecY subunit, partial [Bifidobacterium
longum subsp. longum 2-2B]
gi|386411510|gb|EIJ26233.1| preprotein translocase, SecY subunit, partial [Bifidobacterium
longum subsp. longum 2-2B]
Length = 407
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 195/413 (47%), Gaps = 27/413 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LGDFGAE 79
E+R+++ +I++ RIG FIP PG D ++ + + S S + L GA
Sbjct: 5 KELRKKILFVLFIIIVYRIGSFIPTPGVDYNVVNKCMATIGSASQENFIGLVNLFSGGAM 64
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
L+LS F LG+ P I ASI++Q+L ++P L KEG G K+ Y ++++G A+L++
Sbjct: 65 LQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYLTIGLAVLQS 124
Query: 140 VIV-------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
+ A ++ SV +++V ++ G + W+ + +++ G GQG S
Sbjct: 125 TTILVTARSGALFNYQCDQVIPDGSVFNLVVMVLIMTGGTGLIMWMAELVTDKGIGQGMS 184
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKL 251
++I + I +G+ L+++ G+ W F + + + I+ V E C R+V +
Sbjct: 185 ILIFMSICSGFLPQLWEIGYGTNGTDGDWLKFGIVVGVLVVILIF--VDFVELCQRRVPV 242
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
QY + S Y+P IN SG+ P + + +LA P+++A G
Sbjct: 243 QYTRRMIGRKMYGGS-----STYLPLKINMSGVIPPIFASSILAIPTLIAQ-FGKSDQSW 296
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPG 369
VK I N + W Y +YA + F F I P E AD + + G IP ++ G
Sbjct: 297 VKWI-NANLANTTSVW-YIALYALMIVFFCFFYTSITFNPDETADNMKQYGGFIPGIRAG 354
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
AT YLT + G + L +A T+L L +N G T++LII
Sbjct: 355 NATSRYLTYVMNRLNTVGAVYLLFVALIPTVLIMAL-GLNAKLPFGGTTILII 406
>gi|373489028|ref|ZP_09579691.1| protein translocase subunit secY/sec61 alpha [Holophaga foetida DSM
6591]
gi|372004504|gb|EHP05143.1| protein translocase subunit secY/sec61 alpha [Holophaga foetida DSM
6591]
Length = 448
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 209/432 (48%), Gaps = 31/432 (7%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ------DYLSFVSGSVDELGDF 76
F E+R+RL T VL+++ R+G + +PG + + + D L+ V +L
Sbjct: 8 FSNPELRKRLLFTLVLLLVYRLGVHVSVPGVNAEALAKNIGKAGDLLNVV-----DLFSG 62
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFA 135
GA K S F LGI+P I ASI++Q+L +VPS+ L +KEG G +K+ + ++++G A
Sbjct: 63 GAFKKFSVFALGITPYITASIVLQLLGAVVPSIENLQKKEGEAGRQKVNQWTRYLTVGLA 122
Query: 136 ILEAVIVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
++ +A + A+ + ++ A+ L G + + WI + I++ G G G SL+
Sbjct: 123 FVQGFGIASLAQGMGTDVVANPGLGFKLLCAWTLATGTIFVMWIGEQITDRGLGNGISLL 182
Query: 195 ICVGILTGYTE---TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
I GI+ G + TL M + + P GVF ++ VVV V+
Sbjct: 183 IFAGIVAGLPKGATTLGAMFRDSVMNKGNVAP-----PGVFILLAAAMVVVLIAVVLVES 237
Query: 252 QYYGFKLASAAREDSP--ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 309
Y + A R DS ++ Y+P +N +G+ PV+ + ++ FP+ + +
Sbjct: 238 AYRRIPIHYARRSDSSRMASQRSSYMPLKVNTAGVMPVIFASSVIFFPATIGQFTRWEWL 297
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVK 367
LNP A W+Y ++ V F F I P E A+ + + G IP ++
Sbjct: 298 AKASSFLNPS----AHFWIYTPVFVGVVIFFAFFYTSIVFNPDETAENMKRSGGYIPGIR 353
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PGK T Y+ I + F G + L++++ ++ + + +N F G TS+LI+VG +
Sbjct: 354 PGKETSVYMDGILSKLTFAGAVYLALISIVPLVITNSMPGLN--FYFGGTSLLIVVGVAM 411
Query: 428 ELRRSYQAYNVM 439
+ ++Y VM
Sbjct: 412 DTVSQLESYQVM 423
>gi|29839879|ref|NP_828985.1| preprotein translocase subunit SecY [Chlamydophila caviae GPIC]
gi|29834226|gb|AAP04863.1| preprotein translocase SecY subunit [Chlamydophila caviae GPIC]
Length = 457
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 218/451 (48%), Gaps = 39/451 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF---GAEL 80
+E+R++LF T L+ R+G FIP+PG + + + S + +L D GA
Sbjct: 11 AELRKKLFFTFALLAACRVGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFSGGAFA 70
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEA 139
+++ LG+ P I ASI++Q+L +PS+ + +E D G KI ++G A +++
Sbjct: 71 QMTVIALGVVPYISASIIVQLLLVFMPSIQREMRESPDQGKRKIGRMTRLFTVGLAFIQS 130
Query: 140 VIVACYSLPYSIYAASHSVKHVMVTAFL-------------LVCGAMTMSWICDTISESG 186
++ A ++L ++ + ++ + + G + + WI + IS+ G
Sbjct: 131 LLFAKFALKMNMSIPGIVLPTLLSSKLFGAPWIFYMTTVVVMTTGTLLLMWIGEQISDKG 190
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTMWAVVV 242
G G SLII +GIL + L ++++L LGS S +L L +F V + +++
Sbjct: 191 IGNGVSLIISLGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCFIFVFVLVTTILI 250
Query: 243 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
EG RK+ +QY + RE I Y+P +N +G+ PV+ + LL FP+ +
Sbjct: 251 IEGVRKIPVQYA--RRVIGRRE---IPGGGSYLPLKVNYAGVIPVIFASSLLMFPATIGQ 305
Query: 303 ILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNK 358
+ S + + + +L+P + WVY + Y + F F A P++IA + K
Sbjct: 306 FMSSDSSWLKRIAMMLSPGS------WVYSSCYVLLIIFFTYFWTATQFHPEQIASEMKK 359
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFT 417
A IP ++ GK T YL G + L+++A +IL L N + +G T
Sbjct: 360 NNAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVIAILPSILGRVLHVDANVSYFLGGT 419
Query: 418 SVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
++LI+VG +++ + A+ +M L++
Sbjct: 420 AMLIVVGVVLDTMKQVDAFLLMRRYDSFLKK 450
>gi|19551791|ref|NP_599793.1| preprotein translocase subunit SecY [Corynebacterium glutamicum
ATCC 13032]
gi|62389446|ref|YP_224848.1| preprotein translocase subunit SecY [Corynebacterium glutamicum
ATCC 13032]
gi|145294720|ref|YP_001137541.1| preprotein translocase subunit SecY [Corynebacterium glutamicum R]
gi|417969778|ref|ZP_12610714.1| preprotein translocase subunit SecY [Corynebacterium glutamicum
S9114]
gi|418244734|ref|ZP_12871148.1| preprotein translocase subunit SecY [Corynebacterium glutamicum
ATCC 14067]
gi|585986|sp|P38376.1|SECY_CORGL RecName: Full=Protein translocase subunit SecY
gi|13310194|gb|AAK18191.1|AF331925_2 SecY [Corynebacterium glutamicum]
gi|699588|dbj|BAA03207.1| SecY protein [[Brevibacterium] flavum]
gi|21323320|dbj|BAB97948.1| Preprotein translocase subunit SecY [Corynebacterium glutamicum
ATCC 13032]
gi|41324780|emb|CAF19262.1| preprotein translocase subunit SecY [Corynebacterium glutamicum
ATCC 13032]
gi|140844640|dbj|BAF53639.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045882|gb|EGV41551.1| preprotein translocase subunit SecY [Corynebacterium glutamicum
S9114]
gi|354511243|gb|EHE84158.1| preprotein translocase subunit SecY [Corynebacterium glutamicum
ATCC 14067]
Length = 440
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 204/430 (47%), Gaps = 46/430 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR-------RLIPQDYLSFVSGSVDEL 73
++F +++R+++F T +IV+ RIG IP PG D R + QD S S + L
Sbjct: 6 QAFKDADLRKKIFFTIAMIVLYRIGAQIPSPGVDYATISGRLRDLTQDQSSVYS--LINL 63
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
GA L+LS F +GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++
Sbjct: 64 FSGGALLQLSIFAIGIMPYITASIIVQLLTVVIPHFEELKKEGQSGQAKMMQYTRYLTVA 123
Query: 134 FAILEAV-IVACYSLPY------SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
A+L++ IVA + +A + ++V + GA+ + W+ + I+E G
Sbjct: 124 LALLQSSGIVALADREQLLGAGIRVLSADRNFFDLIVLVITMTAGAVLVMWMGELITEKG 183
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G SL+I GI T +L G F + L V I+ + V V +G
Sbjct: 184 VGNGMSLLIFAGIATRLPTDGMNILGNSGGVV-----FAVVLASVL-ILVIGVVFVEQGQ 237
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 238 RRIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNS 292
Query: 307 -------PFWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADY 355
+WQ + + P + W Y +Y F+ F + P E A+
Sbjct: 293 GSLEVSDNWWQRNIIAHLQTPSS------WQYIVLYFALTIFFSYFYVSVQYDPAEQAEN 346
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI-LDHYLRRINEGFS- 413
+ K G IP ++PG+ T EYL + F G L L+++A I LD + + G +
Sbjct: 347 MKKYGGFIPGIRPGRPTAEYLGFVMNRLLFVGSLYLAVIAVLPNIMLDLGVDAGSAGATP 406
Query: 414 IGFTSVLIIV 423
G T++LI+V
Sbjct: 407 FGGTAILILV 416
>gi|340621240|ref|YP_004739691.1| Preprotein translocase subunit secY [Capnocytophaga canimorsus Cc5]
gi|339901505|gb|AEK22584.1| Preprotein translocase subunit secY [Capnocytophaga canimorsus Cc5]
Length = 448
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 215/424 (50%), Gaps = 23/424 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDR-RLIPQDYLSFVSGSVDELGDF--GAELKL 82
E+R R+ +T ++++ R G + LPG D +L + G +D L F GA
Sbjct: 14 DELRNRVILTLGILLVYRFGAHVVLPGIDSAQLHELTQKTSGGGLLDILNAFTGGAFANA 73
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI- 141
S F LGI P I ASI++Q++ +P L +L+KEG G K+ W+++ I++A
Sbjct: 74 SVFALGIMPYISASIVVQLMGIAIPYLQKLQKEGESGRRKLNQITRWLTILICIVQAPAY 133
Query: 142 ---VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+ +P S + + ++ +LV G + W+ + I++ G G G SL+I VG
Sbjct: 134 LYGLGALGVPDSAFVLGKGLDFIIPAVIILVTGTVFAMWLGEKITDKGIGNGISLLIMVG 193
Query: 199 ILTGY-TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
I+ + + S++ GS+ ++ L+ ++ ++ + ++ + R++ +Q Y +
Sbjct: 194 IIARLPAAAISEARSRIEGSNGGLMLILVELI-IWFVIILLSIFLIMAVRQIPVQ-YARR 251
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 317
A A E + + YIP +N SG+ P++ L+ P+ +A +L S + KE
Sbjct: 252 TAGGAVEKN-VFGARQYIPLKLNASGVMPIIFAQALMFVPAAVAGLLTS---ETAKEF-- 305
Query: 318 PETSVGARPWVYYT-IYAFFVFLFNIFDIA-NLP-KEIADYLNKMGARIPNVKPGKATIE 374
+ + G +Y ++A + LF F A +P ++AD L + G IP ++PGK T +
Sbjct: 306 -QAAFGDIFGFWYNLLFAVLIILFTYFYTAITVPTNKMADDLKRSGGFIPGIRPGKETAD 364
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRS 432
YL KI + F G + L+++A IL + + +G+++ G TS+LI+VG I+ +
Sbjct: 365 YLDKIMSLITFPGSIFLALIAVFPAILVKII-DMQQGWAMFYGGTSLLILVGVAIDTMQQ 423
Query: 433 YQAY 436
+Y
Sbjct: 424 VNSY 427
>gi|290958131|ref|YP_003489313.1| preprotein translocase subunit SecY [Streptomyces scabiei 87.22]
gi|260647657|emb|CBG70762.1| preprotein translocase SecY subunit [Streptomyces scabiei 87.22]
Length = 437
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 206/430 (47%), Gaps = 24/430 (5%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDELGDF- 76
A +F ++R++L T +IVI RIG IP+PG D + D SG + F
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVIYRIGTHIPIPGVDYTAVQFCIDQTKSNSGLFGLVNMFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ A
Sbjct: 66 GGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTSKITQYTRYLTVALA 125
Query: 136 ILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
+L+ + + ++++ S+ +V + G + W+ + I++ G
Sbjct: 126 VLQGTGLVATARSGALFSQCPQANAIVPDDSIFTTLVMVVTMTAGTAVVMWLGELITDRG 185
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G S+++ + I + L+ + Q G W ++ V ++ V V +
Sbjct: 186 IGNGMSILMFISIAATFPSALWSIKEQ--GDLADGWIEFGIVIAVGLVMVALVVFVEQAQ 243
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R+V +QY + + + YIP +N +G+ PV+ + LL P+++ GS
Sbjct: 244 RRVPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGIIPVIFASSLLYIPALVVQFSGS 298
Query: 307 PF-WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W + +T+ A VY+ + FF F + I+ P+E+AD + K G IP
Sbjct: 299 TAGWAAWIQKNLADTAAPAHITVYFFLIIFFAFFY--VAISFNPEEVADNMKKYGGFIPG 356
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++ G+ T EYL+ + + G L L ++A T+ L N+ F G TS+LIIVG
Sbjct: 357 IRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAPLGA-NQNFPFGGTSILIIVGV 415
Query: 426 IIELRRSYQA 435
+E + ++
Sbjct: 416 GLETVKQIES 425
>gi|295425632|ref|ZP_06818319.1| preprotein translocase subunit SecY [Lactobacillus amylolyticus DSM
11664]
gi|295064648|gb|EFG55569.1| preprotein translocase subunit SecY [Lactobacillus amylolyticus DSM
11664]
Length = 431
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 216/430 (50%), Gaps = 27/430 (6%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
S L NA F EIR +++ T ++++ RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIWFTLFILLLYRIGANIAVPGVNAKAITQVAQTGLVPMLDTV 59
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLTL 118
Query: 133 GFAILEA--VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A +++ + + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFVQSLGITLGFNALTQMGLVKNQTWQTYLEIAIIMTGGTMLLNWLGDEITDKGLGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 245
S+II GI+ ++++ ++ + +S RW F +G++ IVT V +
Sbjct: 179 ISVIIFAGIIARLPSGMWQIYNEEIVNNSASDRWQGILFFIGVIVAILIVTQLVTWVEQA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVL-TTTYLLAFPSILASIL 304
R++ +QY + I+ E ++P +N SG+ PV+ +++++ ++L +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIITPATVLMAFQ 289
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGAR 362
S Q ++L S+ P V IY + LF F + P+++A+ L K GA
Sbjct: 290 KSQGDQQWYQVLTNIFSLQTTPGV--IIYTILIILFTFFYAFVQVNPEKLAENLQKQGAY 347
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP+V PGK T +Y++K+ G + L ++A + ++ + +G TS+LI+
Sbjct: 348 IPSVWPGKDTQDYVSKLLMRLSTVGSIFLGLVALIPQLATNFW-GLPSSIGLGGTSLLIV 406
Query: 423 VGSIIELRRS 432
+G ++EL R
Sbjct: 407 IGVVLELSRQ 416
>gi|281412749|ref|YP_003346828.1| preprotein translocase, SecY subunit [Thermotoga naphthophila
RKU-10]
gi|281373852|gb|ADA67414.1| preprotein translocase, SecY subunit [Thermotoga naphthophila
RKU-10]
Length = 431
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 212/437 (48%), Gaps = 46/437 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDE 72
+F E+R R+ T + +++ R+G +IP+PG + RR+ ++ + D
Sbjct: 7 NAFKIPELRDRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDV 66
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
GA + S F + ++P I ASI++Q+L ++PSL ++ +EG +G +K Y ++L
Sbjct: 67 FTG-GALSQFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAKYTRRLTL 125
Query: 133 GFAILEAVIVA---CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+A ++ S P I + + +++ ++ G M + W+ + I+E G G
Sbjct: 126 LIGGFQAFFISFSLARSNPDMIAPGVNVFQFTVLSTMSMLAGTMFLLWLGERITEKGIGN 185
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRK 248
G S++I GI+ Y Y + L G ++ W F++ + ++T++ ++ V + R+
Sbjct: 186 GISILIFAGIVARYPS--YIRQAYLGGLNLLEWIFLIAI----ALITIFGIILVQQAERR 239
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
V +QY A Y+P +N G+ P++ + +++ PS +ASI +
Sbjct: 240 VTIQY-----ARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNN-- 292
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFN------IFDIANLPKEIADYLNKMGAR 362
+ +K + A ++Y IY VF F IFD P+EI++ + K G
Sbjct: 293 -ETLKNLFR------AGGFLYLLIYGLLVFFFTYFYSVVIFD----PREISENIQKYGGY 341
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++PG++T +YL ++ F G + L ++A ++ I IG TS LI
Sbjct: 342 IPGLRPGRSTEQYLHRVLNRVTFIGAVFLVVIALLPYLVQG---AIKVNVWIGGTSALIA 398
Query: 423 VGSIIELRRSYQAYNVM 439
VG +++ + + + VM
Sbjct: 399 VGVALDIIQQMETHMVM 415
>gi|359433065|ref|ZP_09223408.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20652]
gi|357920221|dbj|GAA59657.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20652]
Length = 442
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 205/443 (46%), Gaps = 44/443 (9%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++RRL I+I R+G F+P+PG D ++ D+ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVL-ADFFEQQKGTIVEMFNMFSGGALERA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI+ Q+L H+ P ++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIITQLLTHMYPPFIELKKEGEQGRKKISQYTRYGTLVLATIQSIGI 134
Query: 143 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A SLP + + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AS-SLPGMMEGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWP------FMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY 253
L +GS+V F+L ++ V + VV E G R++ + Y
Sbjct: 194 AN--------LPSAIGSTVEMARQGDLNVFVLLMVAVIVFAVTYLVVFFERGQRRIVVNY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SP 307
A + ++P +N +G+ P + + ++ FP +AS G +
Sbjct: 246 -----AKRQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVAD 300
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPN 365
Q V L P +P +Y + A + F F A + P+E AD L K GA IP
Sbjct: 301 VLQAVATTLTP-----GQP-LYSLVLAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPG 354
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+ K+ G L ++ + + + F G TS+LIIV
Sbjct: 355 IRPGEQTSKYIDKVMTRLTLAGALYITFICLVPEFMTMAWQ---TPFYFGGTSILIIVVV 411
Query: 426 IIELRRSYQAYNVMPSLSKALRR 448
I++ Q + + L++
Sbjct: 412 IMDFMAQVQTHLMSHQYDSVLKK 434
>gi|400406268|ref|YP_006589016.1| protein translocase subunit secY/sec61 alpha [secondary
endosymbiont of Heteropsylla cubana]
gi|400364521|gb|AFP85588.1| protein translocase subunit secY/sec61 alpha [secondary
endosymbiont of Heteropsylla cubana]
Length = 443
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 201/420 (47%), Gaps = 26/420 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++RR F +V+ RIG FIP+PG D ++ + L G++ E+ + GA +
Sbjct: 17 SELKRRFFFLIRALVVLRIGSFIPIPGIDATVLAK-LLDKQRGTIIEMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L I PS+ +++KEG G KI Y + +L AI +++ +
Sbjct: 76 SIFALGIMPYISASIIIQLLTVISPSMGEIKKEGAAGRRKINQYTRYGTLLLAIFQSIGI 135
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFL----LVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A LP + V + F LVCG M + W+ + I++ G G G S+II G
Sbjct: 136 AT-GLPNMPGMENLVVNPGAIFYFTAVISLVCGTMFLMWLGEQITDRGIGNGISMIIFAG 194
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ G + K + Q + + + + VF+++ + + V G R++ + Y
Sbjct: 195 IVAGLPPAIVKTIEQSRQGEIHFLVLLFIAILVFSVI-FFVIFVERGQRRIVVNY----- 248
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKE 314
A + ++P +N +G+ P + + ++ FP LAS G + V
Sbjct: 249 AKRQQGRRIYATQSTHLPLKVNMAGVIPAIFASSIILFPVTLASWFGGGTGWTWLTMVSL 308
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
L P + A + I+ F + +F+ P+E AD L K GA + ++PG+ T +
Sbjct: 309 YLQPGQPLYALLYTIIIIFFCFFYTTLVFN----PRETADNLKKSGAFVSGIRPGEQTAK 364
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ K+ G L ++ + ++ ++ F G TS+LI+V I++ Q
Sbjct: 365 YIAKVMNRLTLIGALYITFICLIPELMRDTMK---VPFYFGGTSLLIVVVVIMDFISQMQ 421
>gi|359428612|ref|ZP_09219642.1| preprotein translocase secY subunit [Acinetobacter sp. NBRC 100985]
gi|358235798|dbj|GAB01181.1| preprotein translocase secY subunit [Acinetobacter sp. NBRC 100985]
Length = 452
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 204/427 (47%), Gaps = 32/427 (7%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR +F+ L+V R+G IPLPG D + + F + LG F GA
Sbjct: 23 YREIIRRLMFLIGALLVF-RLGAHIPLPGIDNVALAR---FFKANEGTFLGLFNMFSGGA 78
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y + +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRYGTLLLALVQ 138
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
V + C L + + + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 GVGM-CAGLISQGITLTSGLAFYIPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAG 197
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGC-RKVKLQYYG 255
I+ G L ++ Q S ++GL G+ ++ + A+V E R++ + Y
Sbjct: 198 IVAG----LPNLVIQSFTSVQNGQGSLIGLAVFGLLSLAVLTAIVFIEKAQRRIPVNY-- 251
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS--PFWQHVK 313
A + T + ++P IN +G+ P + + LL FP+ L LGS P VK
Sbjct: 252 ---AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGIVK 308
Query: 314 EILNPETSV--GARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 369
L V +P +Y ++ + F F A + PKE+++ L + GA +P ++PG
Sbjct: 309 RSLQDLALVLSPGQP-LYLMLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPG 367
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
+ T YL I F G + ++++ IL F +G TS+LI+V +++
Sbjct: 368 EQTARYLDHILNRLTFIGAIYITVVCLMPMILQ---SSFGIPFHLGGTSLLIVVVVVMDF 424
Query: 430 RRSYQAY 436
QA+
Sbjct: 425 MAQLQAH 431
>gi|119773374|ref|YP_926114.1| preprotein translocase subunit SecY [Shewanella amazonensis SB2B]
gi|119765874|gb|ABL98444.1| protein translocase subunit secY/sec61 alpha [Shewanella
amazonensis SB2B]
Length = 446
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 197/425 (46%), Gaps = 34/425 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 80
SE++ RL I++ R G F+P+PG D ++ + + G++ LG F GA
Sbjct: 16 SELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQ-QKGTI--LGMFNMFSGGALE 72
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+ S F LGI P I ASI+MQ+L + P+L +L+KEG G KI Y W +L ++V
Sbjct: 73 RASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRRKISQYTRWGTLVLGTFQSV 132
Query: 141 IVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+A LP + + V LV G M + W+ + I+E G G G S++I G
Sbjct: 133 GIAT-GLPNLVPGLVVNPGFGFYFVAIVSLVTGTMFLMWLGEQITERGIGNGISILIFAG 191
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFK 257
I+ G + + Q + +L L+GV VT + V V G R++ + Y
Sbjct: 192 IVAGLPSAIGQTAEQARQGDLNV--LVLLLIGVIVFAVTYFVVFVERGQRRIVVNY---- 245
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 317
A + + ++P +N +G+ P + + ++ FP LA W E L+
Sbjct: 246 -AKRQQGNKIFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTLAQ------WFGQNEALS 298
Query: 318 --PETSVGARPW--VYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
+ S+ P +Y +YA + F F A + P+E AD L K GA IP ++PG+
Sbjct: 299 WLSDISLAVSPGQPLYSLLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQ 358
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T Y+ K+ G L ++ + I + L F G TS+LI+V I++
Sbjct: 359 TSRYIDKVMTRLTLAGALYITFIC---LIPEFMLIAWKVQFYFGGTSLLIMVVVIMDFMA 415
Query: 432 SYQAY 436
Q +
Sbjct: 416 QVQTH 420
>gi|441125|gb|AAC36888.1| homolog [Chlamydia trachomatis]
Length = 457
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 221/456 (48%), Gaps = 39/456 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 76
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S + +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSRGLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRLFTLVL 125
Query: 135 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A ++L P + A S+K + T ++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMTTGTLLLMWVGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF----MLGLLGVFTIVTM 237
IS+ G G G SLII +GIL + L + ++L S F +L L VF V +
Sbjct: 186 ISDKGIGNGISLIITLGILASFPSVLGSIFNKLNLGSQDPSEFGIVSLLILCAVFVFVLI 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
V++ EG RK+ +Q+ + RE + Y+P +N +G+ PV+ + LL FP
Sbjct: 246 ATVLIIEGVRKIPVQHA--RRIIGRRE---VVGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 298 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIA 353
+ + L S + + + +L+P + Y Y + F F A P++IA
Sbjct: 301 ATIGQFLSSESSWLKRIATMLSPGSV------AYSIFYVLLIIFFTYFWTATQFRPEQIA 354
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGF 412
+ K GA IP ++ GK T YL G + L+++A ++L LR N +
Sbjct: 355 SEMKKNGAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVVAILPSVLGRILRVDANVSY 414
Query: 413 SIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+G T++LI+VG I++ + A+ ++ L++
Sbjct: 415 FLGGTAMLIVVGVILDTMKQIDAFLLVRRYDGVLKK 450
>gi|348176406|ref|ZP_08883300.1| preprotein translocase subunit SecY [Saccharopolyspora spinosa NRRL
18395]
Length = 437
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 202/430 (46%), Gaps = 62/430 (14%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE-------LGDFGAE 79
++RR++ T ++V+ R+G IP PG I Q ++ + GS + L GA
Sbjct: 13 DLRRKILFTLGMVVLYRLGATIPSPGVSYPNI-QKCIAQIQGSGSQSVYSLLNLFSGGAL 71
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
L+LS LGI P I ASI++Q+L ++P QL+KEG G K+ Y ++++ AIL+
Sbjct: 72 LQLSVLSLGIMPYITASIIIQLLQVVIPRFEQLKKEGQSGQAKLIQYTRYLTIALAILQG 131
Query: 140 VIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
+ ++ ++ SV +++ ++ GA + W+ + I+E G G G S
Sbjct: 132 TGIVALAVRGQLFQGCSVSVIPDDSVLNLITIVVVMTAGAAVLMWMGELITERGIGNGMS 191
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-------VTEG 245
L+I V I + +L+ G VFT+V +AVV + +
Sbjct: 192 LLIFVSIASRIPAEGGAILTSHGGL-------------VFTVVCAFAVVIIATVVFIEQA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
R++ +QY + + Y+P +N +G+ PV+ + LL P +L + G
Sbjct: 239 QRRIPVQYAKRMIGRRMYGGT-----STYLPLKVNQAGVIPVIFGSSLLYLPQLLGQLAG 293
Query: 306 SP--FWQHVKE--ILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKM 359
+ +W + I++P + WV+ +Y + F F I P+E AD + K
Sbjct: 294 NQDTWWARFIQTYIVSPSS------WVHILLYMSLIIFFAYFYVSITFNPEERADDMKKF 347
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI------NEGFS 413
G IP ++PG+ T EYL+ + + G L L I+A IL ++ I N+ F
Sbjct: 348 GGFIPGIRPGRPTAEYLSFVLSRITLPGSLYLGIIA----ILPNFFLGITGGQGQNQNFP 403
Query: 414 IGFTSVLIIV 423
G T+VLI+V
Sbjct: 404 FGGTAVLIMV 413
>gi|320335503|ref|YP_004172214.1| preprotein translocase subunit SecY [Deinococcus maricopensis DSM
21211]
gi|319756792|gb|ADV68549.1| preprotein translocase, SecY subunit [Deinococcus maricopensis DSM
21211]
Length = 435
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 201/430 (46%), Gaps = 36/430 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 73
++F +++R++ T +L+ + R+G IP PG + + Q +S +SG
Sbjct: 7 DAFRIPDLQRKILFTLLLLGVYRLGNAIPTPGVNVSALEQTTNGGLFGLISLISG----- 61
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
G + S F LG+ P I ASI++Q+L +P L +L KEG +G +KI Y + ++G
Sbjct: 62 ---GNLSQFSIFALGVLPYITASIVIQLLTSTIPFLEKLSKEGEEGRKKITQYTRYAAIG 118
Query: 134 FAILEA---VIVACYSLPYSIYAA-SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
++A V+ + P + V+V V G W+ + I+E G G
Sbjct: 119 LGTVQALFFVLAGIVNDPAKLSPGWGQDAFTVVVMVLTQVAGIAFTMWLGERITEVGIGN 178
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
G SLII GI+ Y + + QLL ++ + + +V V V +G R+V
Sbjct: 179 GISLIIMAGIVARYPVDI-SLTGQLLAKDQVSLLGIVAFIVILLVVLAGIVFVQQGERRV 237
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL--ASILGSP 307
+QY A + + Y+P +N +G+ PV+ +L P+++ A+ +P
Sbjct: 238 PVQY-----ARKQVGNRQVGGQATYLPIKVNQAGVIPVIFAGAMLILPNLIQQATTTRAP 292
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVK 367
V + + S G+ ++ + F F + + PK I++ L + G IP V+
Sbjct: 293 ---QVADFIGKYLSFGSPLYLALEVLLIFGFTYLYNSVQFDPKRISEQLRESGGFIPGVR 349
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSVLIIVGS 425
PG AT EYL +I + WG + L++L TIL +++ F + T +LI+VG
Sbjct: 350 PGTATAEYLGRISSRISLWGAIFLAVL----TILPQIVQKATGITTFQLSGTGLLIVVGV 405
Query: 426 IIELRRSYQA 435
++ + ++
Sbjct: 406 ALDTLKQLES 415
>gi|339624396|ref|ZP_08660185.1| preprotein translocase subunit SecY [Fructobacillus fructosus KCTC
3544]
Length = 432
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 212/428 (49%), Gaps = 41/428 (9%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV-SGSVDELGDF--GAELK 81
+ +IR+++ T LI + RIG I +PG + P S SG ++ L F G L
Sbjct: 11 QKDIRKKMLWTVFLIFVYRIGTHITVPGVN----PAALQSVANSGLLNILNIFSGGGLLN 66
Query: 82 LSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
S F +G+SP + A I++Q+L IVP V+ K+G G K+ ++++ FA L++V
Sbjct: 67 FSLFAMGVSPYVTAQIVVQLLQLDIVPRFVEWSKQGEVGRRKLNQATRYLTIIFAFLQSV 126
Query: 141 IVACYSLPYSIYAASHSVKHVM-VTAFLLVCGAMTMS-----WICDTISESGFGQGSSLI 194
+ ++ AA VK VT+FLL+ MTM W+ + I+E G G G S+I
Sbjct: 127 GITA---GFNSLAAYGLVKQTNNVTSFLLIGSVMTMGTFFAMWLGEMITEKGLGNGVSMI 183
Query: 195 ICVGILTGYTETLYKMLSQ-LLGSS----VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
I GI++ ++ ++ +L +S V W F+ L+ ++ E RK+
Sbjct: 184 IFSGIISQTPSAFKEIFTENVLQASKSQVVNGWIFVAVLVLAIILIIGITTWFYEAARKL 243
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF- 308
++QY SAA S E Y+P +N SG+ PV+ + L++ P + S +
Sbjct: 244 QIQY----TRSAASYGS-----EAYLPLKLNVSGVIPVIFASSLISTPQTILFAFQSKYS 294
Query: 309 ----WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIP 364
++ +KEI + +T GA V+YT F F N P+++++ L K GA I
Sbjct: 295 SDQWFKVLKEIFSMQTITGA---VFYTAMIILFTYFYAFVQVN-PEKLSENLQKQGAYIV 350
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
+V+PG T +++TK+ F G L L +A I + +NE +G TS+LI +G
Sbjct: 351 SVRPGVETQKFITKLLLRLSFVGALYLGFVALVPLIASD-VWGLNEKIGLGGTSLLITIG 409
Query: 425 SIIELRRS 432
++L R
Sbjct: 410 VTLDLLRQ 417
>gi|77361714|ref|YP_341289.1| preprotein translocase subunit SecY [Pseudoalteromonas haloplanktis
TAC125]
gi|76876625|emb|CAI87847.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Pseudoalteromonas
haloplanktis TAC125]
Length = 442
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 198/434 (45%), Gaps = 26/434 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++RRL I+I R+G F+P+PG D ++ D+ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVL-ADFFEQQKGTIVEMFNMFSGGALERA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI+ Q+L H+ P ++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIITQLLTHMYPPFIELKKEGEQGRKKISQYTRYGTLVLATIQSIGI 134
Query: 143 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A SLP + + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-SLPGMMEGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
+ + + ++ + VF VT V G R++ + Y A
Sbjct: 194 ANLPSAIGSTAEMARQGDLNVFVLLMVAVIVFA-VTYLVVFFERGQRRIVVNY-----AK 247
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQHVKE 314
+ ++P +N +G+ P + + ++ FP +AS G + Q +
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVADVLQAIAT 307
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
L P + A I+ F + +F+ P+E AD L K GA IP ++PG+ T +
Sbjct: 308 TLTPGQPLYAMVLAAAIIFFCFFYTALVFN----PRETADNLKKSGAFIPGIRPGEQTSK 363
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ K+ G L ++ + + + F G TS+LIIV I++ Q
Sbjct: 364 YIDKVMTRLTLAGALYITFICLVPEFMTMAWQ---TPFYFGGTSILIIVVVIMDFMAQVQ 420
Query: 435 AYNVMPSLSKALRR 448
+ + L++
Sbjct: 421 THLMSHQYDSVLKK 434
>gi|221632959|ref|YP_002522182.1| preprotein translocase subunit SecY [Thermomicrobium roseum DSM
5159]
gi|221155417|gb|ACM04544.1| preprotein translocase, SecY subunit [Thermomicrobium roseum DSM
5159]
Length = 432
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 221/447 (49%), Gaps = 45/447 (10%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQD----YLSFV 66
+L +F ++RR+L T +++I R IP+PG D +RL+ + L+
Sbjct: 1 MLEALVSAFKLPDLRRKLLFTLGILIIFRFVATIPVPGVDQQALKRLLETNQFLGVLNLF 60
Query: 67 SGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 126
SGS L +F S LG+ P I ASI+MQ+L ++P L +L KEG G KI Y
Sbjct: 61 SGS--TLTNF------SIVALGVYPYITASIVMQLLTPVIPRLTELSKEGALGRAKINQY 112
Query: 127 IWWISLGFAILEA------VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICD 180
W+++ A+L+A + A + ++ ++ ++ + + L G + + W+ +
Sbjct: 113 THWLTVPLALLQAYGHAALMSSAGVLRDFGLFDSATWLRSLALLL-TLTAGTVFLVWLGE 171
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I+E+G G G S+II GI+ ++ ++++ G+ + L + ++ + V
Sbjct: 172 LITENGIGNGVSIIILGGIVAQLPSSVARLVTG--GTLSENLIGTVAFLAIGLLIIVGIV 229
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
++TEG R++ +Q+ A R YIP +N +GM P++ +L P ++
Sbjct: 230 LITEGQRRIPVQH-----ARRVRRGRVYGGGMTYIPLKVNSAGMIPLIFAISILLLPGMI 284
Query: 301 ASILGSPFWQHVKEILNPETSV---GARPW--VYYTIYAFFVFLFNIFDIANLPKEIADY 355
A+ L + ++++ N V + P+ Y+ + F + + + + IA+
Sbjct: 285 ANFLATSEITWLRDVANGIARVFDPNSLPYQIAYFVMVVAFTYFYTMILFQQ--QNIAET 342
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIG 415
L + GA IP ++PG+AT EYLTK+ G L L ++A +L + + +I G ++
Sbjct: 343 LQRQGAFIPGIRPGRATDEYLTKVLMRITLIGALFLGVVA----VLPYIVAKIT-GVTVL 397
Query: 416 F---TSVLIIVGSIIELRRSYQAYNVM 439
F TS+LI+VG I+ R +A +M
Sbjct: 398 FLSSTSLLIVVGVAIDTMRQLEAQLLM 424
>gi|168181884|ref|ZP_02616548.1| preprotein translocase, SecY subunit [Clostridium botulinum Bf]
gi|237796922|ref|YP_002864474.1| preprotein translocase subunit SecY [Clostridium botulinum Ba4 str.
657]
gi|182674851|gb|EDT86812.1| preprotein translocase, SecY subunit [Clostridium botulinum Bf]
gi|229261255|gb|ACQ52288.1| preprotein translocase, SecY subunit [Clostridium botulinum Ba4
str. 657]
Length = 425
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 206/422 (48%), Gaps = 26/422 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 86
++R+RL T +I I R+G +IP+PG D + + +L GA + S F
Sbjct: 13 DLRKRLIFTLFMIAIFRMGNYIPVPGIDTSKLANLTQNGSLFGFYDLISGGAFSRFSIFA 72
Query: 87 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 146
+G+ P I +SI+MQ+L +PSL L KEG +G +KI+ Y + ++ +++A + Y+
Sbjct: 73 MGVVPYINSSIIMQLLTIALPSLESLSKEGEEGRKKIQQYTRYGAVILGVIQA--FSTYA 130
Query: 147 LPYSIYAASHSVKHVMVTAFLLVCGAMT-MSWICDTISESGFGQGSSLIICVGILTGYTE 205
+ A K + + V A T + W D I+E G G G SLII V I++ +
Sbjct: 131 IIARAGALRDGSKLNLFIIIITVTTASTFLMWFGDKITEKGIGNGISLIIFVNIVSRFPS 190
Query: 206 TLYKMLSQLLGSSVRWWP---FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
T+Y ++ +V + F++ L +F +V V++ G R++ +QY G + +
Sbjct: 191 TIYSIVGLQKAETVNFVEVIVFIVIALALFLLV----VIMNLGERRIPVQYAGRAVGNKI 246
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILNPETS 321
+ +IP N+N S + ++ ++ FP + S F++ + LN +
Sbjct: 247 YKGQ-----STHIPINVNSSAVIGIIFAISVMQFPITIGQFWPESAFYKFIT--LNQYSP 299
Query: 322 VGARPWVYYTIY----AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
+ Y +Y FF + + + P E+A+ ++K IP ++PG+ T EY+
Sbjct: 300 FRDKSIAYIVLYFLLTVFFTWFYTVVTFK--PDEMAENMHKSSGFIPGIRPGEPTAEYIE 357
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYN 437
++ + GG +I+A I+ Y + +G S G TS+LI+VG ++ R ++
Sbjct: 358 RVITKSSIIGGTFAAIIAVFPIIMAAYSKF--QGISFGGTSMLIMVGFALDTIRQIESQL 415
Query: 438 VM 439
VM
Sbjct: 416 VM 417
>gi|50843291|ref|YP_056518.1| preprotein translocase subunit SecY [Propionibacterium acnes
KPA171202]
gi|282855179|ref|ZP_06264511.1| preprotein translocase, SecY subunit [Propionibacterium acnes J139]
gi|289424834|ref|ZP_06426616.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK187]
gi|289427682|ref|ZP_06429394.1| preprotein translocase, SecY subunit [Propionibacterium acnes J165]
gi|295131361|ref|YP_003582024.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK137]
gi|335052493|ref|ZP_08545379.1| preprotein translocase, SecY subunit [Propionibacterium sp.
409-HC1]
gi|335053570|ref|ZP_08546406.1| preprotein translocase, SecY subunit [Propionibacterium sp.
434-HC2]
gi|342212720|ref|ZP_08705445.1| preprotein translocase, SecY subunit [Propionibacterium sp.
CC003-HC2]
gi|354607553|ref|ZP_09025522.1| preprotein translocase subunit secY [Propionibacterium sp.
5_U_42AFAA]
gi|365963483|ref|YP_004945049.1| preprotein translocase subunit SecY [Propionibacterium acnes
TypeIA2 P.acn31]
gi|365965727|ref|YP_004947292.1| preprotein translocase subunit SecY [Propionibacterium acnes
TypeIA2 P.acn17]
gi|365974662|ref|YP_004956221.1| preprotein translocase subunit SecY [Propionibacterium acnes
TypeIA2 P.acn33]
gi|386024773|ref|YP_005943078.1| preprotein translocase subunit SecY [Propionibacterium acnes 266]
gi|386070033|ref|YP_005984929.1| preprotein translocase subunit SecY [Propionibacterium acnes ATCC
11828]
gi|387504203|ref|YP_005945432.1| preprotein translocase subunit SecY [Propionibacterium acnes 6609]
gi|407936219|ref|YP_006851861.1| preprotein translocase subunit SecY [Propionibacterium acnes C1]
gi|417930014|ref|ZP_12573394.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK182]
gi|422386351|ref|ZP_16466471.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL096PA3]
gi|422388825|ref|ZP_16468925.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL096PA2]
gi|422391302|ref|ZP_16471393.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL103PA1]
gi|422392494|ref|ZP_16472563.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL099PA1]
gi|422395738|ref|ZP_16475771.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL097PA1]
gi|422425730|ref|ZP_16502660.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL043PA1]
gi|422428720|ref|ZP_16505630.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL087PA1]
gi|422429693|ref|ZP_16506589.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL072PA2]
gi|422433888|ref|ZP_16510752.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL059PA2]
gi|422436489|ref|ZP_16513338.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL083PA2]
gi|422438956|ref|ZP_16515793.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL092PA1]
gi|422443928|ref|ZP_16520725.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL002PA1]
gi|422444552|ref|ZP_16521336.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL027PA1]
gi|422448499|ref|ZP_16525226.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL036PA3]
gi|422451166|ref|ZP_16527870.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL030PA2]
gi|422453966|ref|ZP_16530647.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL087PA3]
gi|422456874|ref|ZP_16533537.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL030PA1]
gi|422458973|ref|ZP_16535622.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL050PA2]
gi|422461293|ref|ZP_16537923.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL038PA1]
gi|422464197|ref|ZP_16540808.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL060PA1]
gi|422467539|ref|ZP_16544091.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA4]
gi|422468985|ref|ZP_16545515.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA3]
gi|422475900|ref|ZP_16552344.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL056PA1]
gi|422478482|ref|ZP_16554903.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL007PA1]
gi|422481159|ref|ZP_16557561.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL063PA1]
gi|422483668|ref|ZP_16560056.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL036PA1]
gi|422484342|ref|ZP_16560720.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL043PA2]
gi|422486896|ref|ZP_16563239.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL013PA2]
gi|422490092|ref|ZP_16566413.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL020PA1]
gi|422493870|ref|ZP_16570167.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL086PA1]
gi|422496530|ref|ZP_16572814.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL025PA1]
gi|422497210|ref|ZP_16573485.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL002PA3]
gi|422500613|ref|ZP_16576868.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL063PA2]
gi|422503568|ref|ZP_16579806.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL027PA2]
gi|422505786|ref|ZP_16582015.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL036PA2]
gi|422508763|ref|ZP_16584922.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL046PA2]
gi|422512175|ref|ZP_16588310.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL087PA2]
gi|422517112|ref|ZP_16593217.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA2]
gi|422517706|ref|ZP_16593797.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL074PA1]
gi|422522316|ref|ZP_16598342.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL045PA1]
gi|422525035|ref|ZP_16601043.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL053PA2]
gi|422526803|ref|ZP_16602796.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL083PA1]
gi|422530007|ref|ZP_16605972.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL053PA1]
gi|422531057|ref|ZP_16607006.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA1]
gi|422532968|ref|ZP_16608910.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL072PA1]
gi|422538094|ref|ZP_16613973.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL078PA1]
gi|422540676|ref|ZP_16616541.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL013PA1]
gi|422540789|ref|ZP_16616651.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL037PA1]
gi|422544781|ref|ZP_16620616.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL082PA1]
gi|422548417|ref|ZP_16624232.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL050PA3]
gi|422553302|ref|ZP_16629088.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA3]
gi|422555967|ref|ZP_16631728.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA2]
gi|422557874|ref|ZP_16633615.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL025PA2]
gi|422559838|ref|ZP_16635553.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA1]
gi|422563719|ref|ZP_16639394.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL046PA1]
gi|422566606|ref|ZP_16642239.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL082PA2]
gi|422568143|ref|ZP_16643767.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL002PA2]
gi|422571627|ref|ZP_16647209.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL067PA1]
gi|422575092|ref|ZP_16650636.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL001PA1]
gi|422579649|ref|ZP_16655168.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA4]
gi|50840893|gb|AAT83560.1| preprotein translocase SecY subunit [Propionibacterium acnes
KPA171202]
gi|282581767|gb|EFB87152.1| preprotein translocase, SecY subunit [Propionibacterium acnes J139]
gi|289154797|gb|EFD03480.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK187]
gi|289159173|gb|EFD07365.1| preprotein translocase, SecY subunit [Propionibacterium acnes J165]
gi|291376238|gb|ADE00093.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK137]
gi|313763211|gb|EFS34575.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL013PA1]
gi|313773126|gb|EFS39092.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL074PA1]
gi|313793284|gb|EFS41342.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA1]
gi|313801072|gb|EFS42340.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA2]
gi|313808813|gb|EFS47267.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL087PA2]
gi|313810393|gb|EFS48107.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL083PA1]
gi|313812271|gb|EFS49985.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL025PA1]
gi|313817992|gb|EFS55706.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL046PA2]
gi|313819906|gb|EFS57620.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL036PA1]
gi|313823396|gb|EFS61110.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL036PA2]
gi|313824868|gb|EFS62582.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL063PA1]
gi|313828391|gb|EFS66105.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL063PA2]
gi|313830109|gb|EFS67823.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL007PA1]
gi|313832619|gb|EFS70333.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL056PA1]
gi|313837975|gb|EFS75689.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL086PA1]
gi|314914358|gb|EFS78189.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA4]
gi|314919590|gb|EFS83421.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL050PA3]
gi|314924155|gb|EFS87986.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL001PA1]
gi|314925762|gb|EFS89593.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL036PA3]
gi|314930181|gb|EFS94012.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL067PA1]
gi|314957147|gb|EFT01251.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL027PA1]
gi|314957788|gb|EFT01891.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL002PA1]
gi|314960842|gb|EFT04943.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL002PA2]
gi|314963516|gb|EFT07616.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL082PA1]
gi|314964885|gb|EFT08984.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL082PA2]
gi|314969901|gb|EFT13999.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL037PA1]
gi|314973042|gb|EFT17138.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL053PA1]
gi|314975538|gb|EFT19633.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL045PA1]
gi|314979773|gb|EFT23867.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL072PA2]
gi|314982280|gb|EFT26373.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA3]
gi|314984822|gb|EFT28914.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA1]
gi|314986080|gb|EFT30172.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA2]
gi|314988695|gb|EFT32786.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL005PA3]
gi|315077137|gb|EFT49204.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL053PA2]
gi|315079824|gb|EFT51800.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL078PA1]
gi|315083191|gb|EFT55167.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL027PA2]
gi|315086855|gb|EFT58831.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL002PA3]
gi|315089947|gb|EFT61923.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL072PA1]
gi|315090467|gb|EFT62443.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL110PA4]
gi|315093702|gb|EFT65678.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL060PA1]
gi|315096731|gb|EFT68707.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL038PA1]
gi|315097959|gb|EFT69935.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL059PA2]
gi|315100602|gb|EFT72578.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL046PA1]
gi|315103994|gb|EFT75970.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL050PA2]
gi|315106045|gb|EFT78021.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL030PA1]
gi|315109205|gb|EFT81181.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL030PA2]
gi|327325145|gb|EGE66951.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL096PA3]
gi|327325226|gb|EGE67031.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL096PA2]
gi|327325521|gb|EGE67320.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL103PA1]
gi|327332735|gb|EGE74469.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL097PA1]
gi|327444026|gb|EGE90680.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL043PA1]
gi|327449346|gb|EGE96000.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL013PA2]
gi|327449426|gb|EGE96080.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL043PA2]
gi|327451447|gb|EGE98101.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL087PA3]
gi|327451577|gb|EGE98231.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL092PA1]
gi|327451864|gb|EGE98518.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL083PA2]
gi|328752078|gb|EGF65694.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL087PA1]
gi|328755525|gb|EGF69141.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL025PA2]
gi|328756309|gb|EGF69925.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL020PA1]
gi|328761357|gb|EGF74884.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL099PA1]
gi|332676231|gb|AEE73047.1| preprotein translocase subunit SecY [Propionibacterium acnes 266]
gi|333763810|gb|EGL41235.1| preprotein translocase, SecY subunit [Propionibacterium sp.
409-HC1]
gi|333766831|gb|EGL44113.1| preprotein translocase, SecY subunit [Propionibacterium sp.
434-HC2]
gi|335278248|gb|AEH30153.1| preprotein translocase subunit SecY [Propionibacterium acnes 6609]
gi|340768264|gb|EGR90789.1| preprotein translocase, SecY subunit [Propionibacterium sp.
CC003-HC2]
gi|340772701|gb|EGR95202.1| preprotein translocase, SecY subunit [Propionibacterium acnes
SK182]
gi|353454400|gb|AER04919.1| preprotein translocase subunit SecY [Propionibacterium acnes ATCC
11828]
gi|353556572|gb|EHC25942.1| preprotein translocase subunit secY [Propionibacterium sp.
5_U_42AFAA]
gi|365740164|gb|AEW84366.1| preprotein translocase subunit SecY [Propionibacterium acnes
TypeIA2 P.acn31]
gi|365742408|gb|AEW82102.1| preprotein translocase subunit SecY [Propionibacterium acnes
TypeIA2 P.acn17]
gi|365744661|gb|AEW79858.1| preprotein translocase subunit SecY [Propionibacterium acnes
TypeIA2 P.acn33]
gi|407904800|gb|AFU41630.1| preprotein translocase subunit SecY [Propionibacterium acnes C1]
gi|456738924|gb|EMF63491.1| preprotein translocase subunit SecY [Propionibacterium acnes
FZ1/2/0]
Length = 439
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 207/449 (46%), Gaps = 51/449 (11%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ A +F ++RR++ T ++ + R+G IP+P + I SGS L
Sbjct: 1 MLSAFANAFRTPDLRRKILFTLFILAVFRLGSVIPVPNVNVTNINTCVTQASSGSSAGLY 60
Query: 75 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
GA LKL+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SMISLFSGGALLKLAIFALGIMPYITASIILQLLTVVIPKLETLKKEGASGQNKITQYTR 120
Query: 129 WISLGFAILEAVIVACYSLPYSIYAA------SHSVKHVMVTAFLLVCGAMTMSWICDTI 182
+++L +L+A + ++ S SV V+V + G + W+ + I
Sbjct: 121 YLTLVLGLLQATAFVTLATSGRLFTCSLPVVYSTSVFEVVVMILTMTAGTTIVMWMGELI 180
Query: 183 SESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
++ G G G S++I I + ++L+ K+ G + W F+ ++ + M AV
Sbjct: 181 TDRGIGNGMSIMIFTQIAARFPDSLWSIKVARNGAGQAHAW--FIFSMVIAIGLAVMAAV 238
Query: 241 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V + +G R++ +QY + S YIP +N SG+ PV+ + +L P +
Sbjct: 239 VFIEQGQRRIPVQYAKRMVGRRMFGGS-----TTYIPLKVNQSGVIPVIFASSILYLPVL 293
Query: 300 LASILGSPFWQHVKEILNPETSVGARPWV--YYT-----IYAFFVFLFNIF------DIA 346
A+ P+TS A W+ Y+T +Y FL IF I
Sbjct: 294 YAT-------------FRPQTS--AAKWIGHYFTRGDHPVYNIAYFLLIIFFCYFYVAIT 338
Query: 347 NLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR 406
P E++D + K G IP ++ GK T +YL + + G L L +++ T+ L
Sbjct: 339 FDPVEMSDNMKKYGGFIPGIRAGKPTEDYLAYVLSRLTAPGSLYLGLISMIPTLAFVSLH 398
Query: 407 RINEGFSIGFTSVLIIVGSIIELRRSYQA 435
N+ F G TS+LIIVG ++ + ++
Sbjct: 399 A-NQNFPFGGTSILIIVGVALDTVKQVES 426
>gi|357390068|ref|YP_004904908.1| putative preprotein translocase SecY subunit [Kitasatospora setae
KM-6054]
gi|311896544|dbj|BAJ28952.1| putative preprotein translocase SecY subunit [Kitasatospora setae
KM-6054]
Length = 435
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 208/445 (46%), Gaps = 46/445 (10%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ A +F ++R++L T ++V+ R+G +P+PG + Q + V+G + G
Sbjct: 1 MLSAFARAFQTPDLRKKLLFTLGIMVLFRLGAHVPMPGINF----QAVHACVNGQKE--G 54
Query: 75 DFG--------AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 126
FG A L+L+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 55 LFGLVNLFSGNALLQLTIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGQAKITQY 114
Query: 127 IWWISLGFAILEAVIVACYSLPYSIYAA---------SHSVKHVMVTAFLLVCGAMTMSW 177
++++ A+L+ + + ++++ S+ + ++ G + W
Sbjct: 115 TRYLTIALAVLQGTGILATASSGALFSGCPEGGNIVPDQSIFRIATMVIIMTAGTTVIMW 174
Query: 178 ICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM 237
+ + I++ G G G S++I I G+ +++ + G + W ++ V IV
Sbjct: 175 LGELITDRGIGNGMSILIFTSIAAGFPGSMWAIKES--GKLLDGWGEFASVIAVGIIVVC 232
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
+ V + R++ +QY A YIP +N +G+ PV+ + LL P
Sbjct: 233 LVIFVEQAQRRIPVQY-----AKRMVGRRSFGGTSTYIPLKVNQAGVIPVIFASSLLYIP 287
Query: 298 SILASILGS----PFW--QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKE 351
+++ + S W H + +P Y+ + FF F + I+ P+E
Sbjct: 288 ALVVQLTNSQADWAIWIKNHFVKGDHPVYMA-----TYFVLIVFFAFFY--VAISFNPEE 340
Query: 352 IADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI-LDHYLRRINE 410
+AD + K G IP ++ G+ T EYL + + G L L ++A + L + ++ N
Sbjct: 341 VADNMKKYGGFIPGIRAGRPTAEYLNYVLTRITWPGSLYLGLIALIPMVALVAFGQQTN- 399
Query: 411 GFSIGFTSVLIIVGSIIELRRSYQA 435
F G TSVLI+VG +E + ++
Sbjct: 400 -FPFGGTSVLIVVGVGLETVKQIES 423
>gi|315127936|ref|YP_004069939.1| preprotein translocase subunit SecY [Pseudoalteromonas sp. SM9913]
gi|359439527|ref|ZP_09229479.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20311]
gi|359446515|ref|ZP_09236181.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20439]
gi|392557094|ref|ZP_10304231.1| preprotein translocase subunit SecY [Pseudoalteromonas undina NCIMB
2128]
gi|315016450|gb|ADT69788.1| preprotein translocase, membrane component, transport across inner
membrane (general secretory pathway) [Pseudoalteromonas
sp. SM9913]
gi|358025770|dbj|GAA65728.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20311]
gi|358039615|dbj|GAA72430.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20439]
Length = 442
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 198/434 (45%), Gaps = 26/434 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++RRL I+I R+G F+P+PG D ++ D+ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVL-ADFFEQQKGTIVEMFNMFSGGALERA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI+ Q+L H+ P ++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIITQLLTHMYPPFIELKKEGEQGRKKISQYTRYGTLVLATIQSIGI 134
Query: 143 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A SLP + + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-SLPGMMNGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
+ + + ++ + VF VT V G R++ + Y A
Sbjct: 194 ANLPSAIGSTAEMARQGDLNVFVLLMVAVIVFA-VTYLVVFFERGQRRIVVNY-----AK 247
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQHVKE 314
+ ++P +N +G+ P + + ++ FP +AS G + Q +
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVADVLQAIAT 307
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
L P + A I+ F + +F+ P+E AD L K GA IP ++PG+ T +
Sbjct: 308 TLTPGQPLYAMVLAAAIIFFCFFYTALVFN----PRETADNLKKSGAFIPGIRPGEQTSK 363
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ K+ G L ++ + + + F G TS+LIIV I++ Q
Sbjct: 364 YIDKVMTRLTLAGALYITFICLVPEFMTMAWQ---TPFYFGGTSILIIVVVIMDFMAQVQ 420
Query: 435 AYNVMPSLSKALRR 448
+ + L++
Sbjct: 421 THLMSHQYDSVLKK 434
>gi|365841060|ref|ZP_09382215.1| preprotein translocase, SecY subunit [Anaeroglobus geminatus F0357]
gi|364559152|gb|EHM37144.1| preprotein translocase, SecY subunit [Anaeroglobus geminatus F0357]
Length = 420
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 206/430 (47%), Gaps = 44/430 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 86
E R+R T ++ +I R+G IP+PG D I + S S + +L GA K S
Sbjct: 13 EFRKRAVFTLIMFIIFRLGVHIPVPGVDATAIESLFNSGQSFGLLDLFSGGALSKFSVLA 72
Query: 87 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILEAVIVAC 144
+ I+P I ASI+MQ+L +VP+ Q K+ DG +KI+ + + LGF +
Sbjct: 73 MSITPYINASIIMQLLTAVVPTFEQWSKDNQDGRDKIQKVTRYGTVILGF-------IQA 125
Query: 145 YSLPYSIYAASHSVKH----VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+++ Y++ A + + + V++ A +L G + W+ D I+ G G G SLII GI+
Sbjct: 126 FAMSYALKANNALIDNSWSMVLMVAIILTAGTCFLMWLGDQITAGGIGDGISLIIFAGIV 185
Query: 201 TGY---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
+ TLY+ + G+ + + L+ +F IV + + VT+G R++++ Y
Sbjct: 186 ARFPNGVNTLYQYVQA--GTINIFQAVLFALIALFMIVIV--IEVTQGQRRIQVHY---- 237
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 317
A +IP +N +G+ P++ + +L FP +A + + Q + ++
Sbjct: 238 -AKRVVGRKMYGGHSTHIPLKVNQAGVIPIIFASSVLMFPITVAQFIRNDTIQWLAQVFG 296
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
T Y + FF + + + N+P ++ + + K G IP ++PG T +Y+
Sbjct: 297 WGTI--GNTVAYAVLIIFFTYFYTAISL-NIP-QMTENMQKYGGFIPGIRPGLPTAKYID 352
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSVLIIVGSIIE------- 428
+I G + L+ +A IL +++ I +G G T+VLI+VG I+
Sbjct: 353 RIMTRITLAGAIFLAFVA----ILPNFIGWITGIQGVYFGGTAVLIVVGVAIDTMKQAES 408
Query: 429 --LRRSYQAY 436
L + YQ +
Sbjct: 409 LVLNKQYQGF 418
>gi|239618245|ref|YP_002941567.1| preprotein translocase subunit SecY [Kosmotoga olearia TBF 19.5.1]
gi|239507076|gb|ACR80563.1| preprotein translocase, SecY subunit [Kosmotoga olearia TBF 19.5.1]
Length = 428
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 210/443 (47%), Gaps = 60/443 (13%)
Query: 18 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG-SVDELGD 75
NA ++ FK E+R R+F T + I R+G +IP+PG + + S+ SG S G
Sbjct: 3 NALKNAFKIPELRDRIFFTLFALAIFRLGIYIPIPGIN----INAWASYFSGLSEGAAGG 58
Query: 76 F---------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 126
F GA S F L ++P I ASI++Q+L +VPSL ++ KEG +G +K
Sbjct: 59 FIGFFDVFTGGALKNFSLFALSVTPYINASIMLQLLASVVPSLKEMLKEGEEGRKKYARL 118
Query: 127 IWWISLGFAILEAVIVA-CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISES 185
+++ L+A ++ S + A + V++ L+ G M + W+ + I+E
Sbjct: 119 TRRLTVFLGSLQAFLLTLALSNNQGLIATPNRAIFVLLGTVSLLGGTMFLLWLGERITEK 178
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTE 244
G G G S++I GI+ Y + + + ++V P +L ++T+ AV+ V
Sbjct: 179 GIGNGISVLIFAGIVARYPQYIAQ-------AAVSLTPLQWIVLIAIAVLTVVAVIYVQM 231
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
G R++++QY A V +IP +N G+ P++ ++ P +++S+L
Sbjct: 232 GERRIEIQY-----ARRVSGRRVFGGVSTHIPIKVNQGGVIPIIFAAAIMTLPQMISSVL 286
Query: 305 GSPFWQHVKEILNPETSVGARPW-----VYYTIYAFFVFLFN------IFDIANLPKEIA 353
PE ++ R + +Y T+Y VF F +FD+ ++ I
Sbjct: 287 -------------PEGNLLGRLFAYSSPLYLTLYGLLVFFFTYFYSTLVFDVKDVSNNIK 333
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS 413
+Y G IP ++PG T Y++++ F G + L I+A +I+ + I
Sbjct: 334 NY----GGYIPGIRPGYPTERYISRVLTRVTFMGAIFLVIIALLPSIVQGF---IGIQIV 386
Query: 414 IGFTSVLIIVGSIIELRRSYQAY 436
IG TS LI VG +++ + +++
Sbjct: 387 IGGTSTLIAVGVALDILQQIESH 409
>gi|289450525|ref|YP_003475764.1| preprotein translocase subunit SecY [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289185072|gb|ADC91497.1| preprotein translocase, SecY subunit [Clostridiales genomosp. BVAB3
str. UPII9-5]
Length = 433
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 212/428 (49%), Gaps = 30/428 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS-GSVDEL 73
V+ ++F ++R+R+ T +I++ R+G IP+PG DR+L F GS+ +
Sbjct: 4 VIETLRKAFNVGDMRKRIIFTIGMIILFRVGGNIPVPGIDRQLFSHLIDRFGQIGSMMNI 63
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
GA S F +GI+P I +SI++Q++ ++PSL L+KEG G +K++S + ++++G
Sbjct: 64 ISGGALKAASIFAMGITPYINSSIIIQLMTVVLPSLQNLQKEGETGRKKMQSIVRYVTIG 123
Query: 134 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLV----CGAMTMSWICDTISESGFGQ 189
++++V + Y+ +A+ +V ++ AF+++ G + WI + I+E G G
Sbjct: 124 LGLIQSV-----AFWYATRSAASTVMPSVLNAFVVILSFTAGTAVIMWIGEQINEWGVGN 178
Query: 190 GSSLIICVGILTG---YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV--VTE 244
G SL+I GIL+ T L++ ++ + LL V V + V V+
Sbjct: 179 GISLLIYAGILSRVPYMTSGLFQYFQAWSAANNFYIALFFALLVVIAFVVIIVFVSYVSL 238
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
R++ + Y A Y+P +N SG+ P++ LL+ P++L S
Sbjct: 239 AERRIPVTY-----AKRVIGRKQFGGQTTYLPLKVNQSGVLPIIFALSLLSLPNMLISF- 292
Query: 305 GSPFWQHVKE-ILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGA 361
F+ H ++N + G+ P+ YY + A + F F I P EIA+ L K G
Sbjct: 293 ---FFSHSNNWLVNWFRNPGSSPF-YYVLQALLIIGFTFFYTAIQFNPLEIANNLQKNGG 348
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
IP ++PG+ T +Y+ + ++ GL +I+ +L G TS+LI
Sbjct: 349 YIPGIRPGRPTCDYIGRTSQRICWFDGLFQTIVVLVPLLLGSATN--TSALWFGGTSILI 406
Query: 422 IVGSIIEL 429
+VG I+L
Sbjct: 407 LVGVNIDL 414
>gi|345874165|ref|ZP_08825981.1| preprotein translocase, SecY subunit [Neisseria weaveri LMG 5135]
gi|417957271|ref|ZP_12600196.1| preprotein translocase, SecY subunit [Neisseria weaveri ATCC 51223]
gi|343968675|gb|EGV36900.1| preprotein translocase, SecY subunit [Neisseria weaveri ATCC 51223]
gi|343970810|gb|EGV38981.1| preprotein translocase, SecY subunit [Neisseria weaveri LMG 5135]
Length = 437
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 207/424 (48%), Gaps = 19/424 (4%)
Query: 30 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 87
R LF+ LIV RIG IP+PG D + + Y S G + L F G+ + S F +
Sbjct: 19 RVLFLLGALIVF-RIGAHIPVPGVDAAALAKLYESAGGGVLGMLNMFSGGSLERFSIFAI 77
Query: 88 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 147
GI P I ASI++Q+ I PSL L+KEG G + I Y + ++ A+L++ VA +
Sbjct: 78 GIMPYISASIIVQLASEIFPSLKLLKKEGEAGRKIITKYTRYGTVLLALLQSFGVATFVF 137
Query: 148 PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETL 207
+ S + + T LV G M + W+ + I+E G G G SLII GI++G +
Sbjct: 138 QQGVVVTSQ-FEFYVSTIVCLVTGTMFLMWLGEQITERGIGNGISLIITAGIVSGVPSGI 196
Query: 208 YKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAAREDS 266
++ + S+ + ++GVF ++ +AVV E RK+ + Y ++ + +
Sbjct: 197 VQLWTLTRQGSISMLMAVSIVIGVFILI--YAVVFFESAQRKIPVHYAKRQIGNRIAQGQ 254
Query: 267 PITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARP 326
++PF +N +G+ P + + ++ FPS + S GS + + G +P
Sbjct: 255 -----NTHMPFKLNMAGVIPPIFASSIILFPSTIFSWFGSTSTDSLLGQIAALLQHG-QP 308
Query: 327 WVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTR 384
+Y +++ + F F A + PKE+A+ L K GA +P ++PG T +YL +
Sbjct: 309 -IYILLFSSAIIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGVQTAKYLETVVLRLT 367
Query: 385 FWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSK 444
F+G L ++I+ L L N F +G TS+LI+V ++ +Y +
Sbjct: 368 FFGALYITIICLIPEFLTTAL---NIPFYLGGTSLLILVVVTMDFSTQIASYRMTQQYEH 424
Query: 445 ALRR 448
++R
Sbjct: 425 LMKR 428
>gi|119472059|ref|ZP_01614317.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Alteromonadales
bacterium TW-7]
gi|359448651|ref|ZP_09238172.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20480]
gi|392539511|ref|ZP_10286648.1| preprotein translocase subunit SecY [Pseudoalteromonas marina
mano4]
gi|119445194|gb|EAW26486.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Alteromonadales
bacterium TW-7]
gi|358045552|dbj|GAA74421.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20480]
Length = 442
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 202/437 (46%), Gaps = 32/437 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++RRL I+I R+G F+P+PG D ++ D+ G++ E+ + GA +
Sbjct: 16 SELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVL-ADFFEQQKGTIVEMFNMFSGGALERA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI+ Q+L H+ P ++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIITQLLTHMYPPFIELKKEGEQGRKKISQYTRYGTLVLATIQSIGI 134
Query: 143 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A SLP + + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-SLPGMMNGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWP------FMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY 253
L +GS+V F+L ++ V + VV E G R++ + Y
Sbjct: 194 AN--------LPSAIGSTVEMARQGDLNVFVLLMVAVIVFAVTYLVVFFERGQRRIVVNY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
A + ++P +N +G+ P + + ++ FP +AS G
Sbjct: 246 -----AKRQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVAD 300
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
+ T++ +Y + A + F F A + P+E AD L K GA IP ++PG+
Sbjct: 301 ALQAVATTLTPGQPLYSLVLAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQ 360
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +Y+ K+ G L ++ + + + F G TS+LIIV I++
Sbjct: 361 TSKYIDKVMTRLTLAGALYITFICLVPEFMTMAWQ---TPFYFGGTSILIIVVVIMDFMA 417
Query: 432 SYQAYNVMPSLSKALRR 448
Q + + L++
Sbjct: 418 QVQTHLMSHQYDSVLKK 434
>gi|294630913|ref|ZP_06709473.1| preprotein translocase, SecY subunit [Streptomyces sp. e14]
gi|292834246|gb|EFF92595.1| preprotein translocase, SecY subunit [Streptomyces sp. e14]
Length = 437
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 216/441 (48%), Gaps = 36/441 (8%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T +IV+ R+G IP+PG + + + Q ++ SG+ G
Sbjct: 1 MLTGFARAFRTPDLRKKLLFTLGIIVVYRVGTHIPIPGVNYKAV-QQCVTEASGNQGLFG 59
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 130 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVM------VTAFLLVC---GAMTMSWICD 180
+++ AIL+ + + +++ +++ T +++C G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGALFNGCSVAGNIVPDRAIFTTITMVICMTAGTAVVMWLGE 179
Query: 181 TISESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMW 238
+++ G G G S+++ + I + L+ K +L G W F ++ V ++
Sbjct: 180 LVTDRGIGNGMSILMFISIAATFPSALWAIKKSGKLAGG---WIEFGT-VILVGLVMVGL 235
Query: 239 AVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 298
V V + R++ +QY + + + YIP +N +G+ PV+ + LL P+
Sbjct: 236 VVFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPA 290
Query: 299 ILASIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIAD 354
++A G+ W K + + G P +Y T+Y + F F +A N P+E+AD
Sbjct: 291 LVAQFAGGNAGW---KTWVTQNLTKGDHP-IYITLYFLLIVFFAFFYVAISFN-PEEVAD 345
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 414
+ K G IP ++ G+ T EYL+ + + G L L ++A T+ ++ F
Sbjct: 346 NMKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALVGFGA-SQNFPF 404
Query: 415 GFTSVLIIVGSIIELRRSYQA 435
G TS+LIIVG +E + ++
Sbjct: 405 GGTSILIIVGVGLETVKQIES 425
>gi|452126802|ref|ZP_21939385.1| preprotein translocase subunit SecY [Bordetella holmesii F627]
gi|452130175|ref|ZP_21942748.1| preprotein translocase subunit SecY [Bordetella holmesii H558]
gi|451921897|gb|EMD72042.1| preprotein translocase subunit SecY [Bordetella holmesii F627]
gi|451923035|gb|EMD73179.1| preprotein translocase subunit SecY [Bordetella holmesii H558]
Length = 441
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 202/418 (48%), Gaps = 21/418 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+++RR+ + +V+ R+G IP+PG + + + G + F GA + S
Sbjct: 15 GDLKRRIVFLVLALVVYRLGTHIPVPGINPDALADLFRQNQGGILGLFNMFSGGALSRFS 74
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV--I 141
F LGI P I ASI+MQ++ +VPSL L+KEG G KI Y + ++ A+++AV
Sbjct: 75 IFALGIMPYISASIIMQLMSVVVPSLEALKKEGEAGRRKITQYTRYGTVVLALVQAVGIS 134
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
VA S P + + + LV G M + W+ + I+E G G G S++I GI+
Sbjct: 135 VALESQPGLVVDPGMLFRFTTIVT--LVTGTMFVMWLGEQITERGLGNGISILIFTGIVA 192
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 261
G L +L + +S+ + ++ + +VT + V V G RK+ + Y ++ +
Sbjct: 193 GLPTALAGLLDLVRTNSMSVVSALF-IIALVVLVTAFVVFVERGQRKITVNYAKRQVGNK 251
Query: 262 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETS 321
++P +N +G+ P + + ++ FP+ + S + + + + +
Sbjct: 252 VYGGQ-----SSHLPLKLNMAGVIPPIFASSIILFPATITSWFST--GDRMVWLRDLAAA 304
Query: 322 VGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKI 379
+ R +Y T+Y+ + F F A + +E AD L K GA +P ++PG+ T Y+ KI
Sbjct: 305 LEPRQPLYITLYSVAIIFFCFFYTALVFNSRETADNLKKSGAFVPGIRPGEQTARYIDKI 364
Query: 380 QASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
G L ++++ +L +L R N F G TS+LIIV ++ QAY
Sbjct: 365 LMRLTLAGALYITLVC----LLPEFLVMRWNVPFYFGGTSLLIIVVVTMDFMAQVQAY 418
>gi|419759878|ref|ZP_14286163.1| preprotein translocase subunit SecY [Thermosipho africanus
H17ap60334]
gi|407514917|gb|EKF49703.1| preprotein translocase subunit SecY [Thermosipho africanus
H17ap60334]
Length = 428
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 216/446 (48%), Gaps = 60/446 (13%)
Query: 18 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
A ++ FK E+R R+ T +++++ R+G +IP+PG + + + +GS L F
Sbjct: 3 KALKNAFKIPELRDRIVFTLLMLIVFRLGIYIPVPGVNLKAWGAAFSQMGTGSAGGLLSF 62
Query: 77 ------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
GA S F L ++P I ASI++Q+L ++PSL ++ KEG +G +K + +
Sbjct: 63 YDVFTGGAFRSFSIFALSVTPYINASIILQLLSSVIPSLKEMLKEGEEGRKKFQRITRNL 122
Query: 131 SLGFAILEAVIVACYSLPYSIYAASHSVKHVMVT-----AFL----LVCGAMTMSWICDT 181
++ ++A +++ + + ++++V FL L+ G M + WI D
Sbjct: 123 TVLLGAIQAFVIS--------FGLARGFENILVIPLWTFVFLATVSLLAGTMFLLWIGDR 174
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
I+E G G G S++I GI+ Y Y + L G ++ W F LLGV ++ + +
Sbjct: 175 ITEKGIGNGISVLIFAGIVARYPT--YFRTAVLGGLNIFEWIF---LLGVMFLMVIGIIY 229
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
V + R++ +QY AS +IP +N SG+ P++ +++ P +A
Sbjct: 230 VQQAERRIMVQY-----ASRMVGRRIYGGTSTHIPIKVNHSGVIPIIFGWAIVSIPVGIA 284
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFN------IFDIANLPKEIADY 355
+ S + + + +P + TIYA +F F +FD PK+I+
Sbjct: 285 QLTNSETAKSLFSMTSP---------LVITIYAVLIFFFTYFYSVVVFD----PKDISQN 331
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI- 414
+ G IP ++PGK T +Y+T++ F G L L +A L YL + G +I
Sbjct: 332 IKSYGGYIPGIRPGKPTEQYITRVLNRITFVGALFLVAIA-----LVPYLVQGVTGVNIW 386
Query: 415 -GFTSVLIIVGSIIELRRSYQAYNVM 439
G TS LI VG +++ + +A+ +M
Sbjct: 387 LGGTSALIAVGVALDIAQQMEAHLIM 412
>gi|15644228|ref|NP_229280.1| preprotein translocase subunit SecY [Thermotoga maritima MSB8]
gi|418045538|ref|ZP_12683633.1| preprotein translocase, SecY subunit [Thermotoga maritima MSB8]
gi|81789631|sp|Q9X1I9.1|SECY_THEMA RecName: Full=Protein translocase subunit SecY
gi|209156622|pdb|3DIN|C Chain C, Crystal Structure Of The Protein-Translocation Complex
Formed By The Secy Channel And The Seca Atpase
gi|209156626|pdb|3DIN|F Chain F, Crystal Structure Of The Protein-Translocation Complex
Formed By The Secy Channel And The Seca Atpase
gi|4982044|gb|AAD36546.1|AE001798_11 preprotein translocase SecY subunit [Thermotoga maritima MSB8]
gi|351676423|gb|EHA59576.1| preprotein translocase, SecY subunit [Thermotoga maritima MSB8]
Length = 431
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 213/437 (48%), Gaps = 46/437 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDE 72
+F E+R R+ T + +++ R+G +IP+PG + RR+ ++ + D
Sbjct: 7 NAFKIPELRDRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDV 66
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
GA + S F + ++P I ASI++Q+L ++PSL ++ +EG +G +K Y ++L
Sbjct: 67 FTG-GALSRFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAKYTRRLTL 125
Query: 133 GFAILEAVIVA---CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+A V+ S P + + ++ +++ ++ G M + W+ + I+E G G
Sbjct: 126 LIGGFQAFFVSFSLARSNPDMVAPGVNVLQFTVLSTMSMLAGTMFLLWLGERITEKGIGN 185
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRK 248
G S++I GI+ Y Y + L G ++ W F++ + ++T++ ++ V + R+
Sbjct: 186 GISILIFAGIVARYPS--YIRQAYLGGLNLLEWIFLIAV----ALITIFGIILVQQAERR 239
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY A Y+P +N G+ P++ + +++ PS +ASI +
Sbjct: 240 ITIQY-----ARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNN-- 292
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFN------IFDIANLPKEIADYLNKMGAR 362
+ +K + A ++Y IY VF F IFD P+EI++ + K G
Sbjct: 293 -ETLKNLFR------AGGFLYLLIYGLLVFFFTYFYSVVIFD----PREISENIRKYGGY 341
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++PG++T +YL ++ F G + L ++A ++ I IG TS LI
Sbjct: 342 IPGLRPGRSTEQYLHRVLNRVTFIGAVFLVVIALLPYLVQG---AIKVNVWIGGTSALIA 398
Query: 423 VGSIIELRRSYQAYNVM 439
VG +++ + + + VM
Sbjct: 399 VGVALDIIQQMETHMVM 415
>gi|418417686|ref|ZP_12990880.1| preprotein translocase, SecY subunit [Streptococcus urinalis
FB127-CNA-2]
gi|410871277|gb|EKS19232.1| preprotein translocase, SecY subunit [Streptococcus urinalis
FB127-CNA-2]
Length = 434
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 213/430 (49%), Gaps = 43/430 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 79
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 14 NVRHKIFYTLFIILVFRIGTHITVPGINAKSLEQLSDLPFLNMLNLVSGN--------AM 65
Query: 80 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 66 RNFSVFSMGVSPYITASIIVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFIQ 125
Query: 139 AV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++ I A ++ ++ +S +VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 126 SIGITAAFNTLSNVGLVSSPNVKTYILIGTLLTTGSVIVTWLGEQITDKGFGNGVSMIIF 185
Query: 197 VGILTGYTETLYKM----LSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGCRKVK 250
GI++ + + + S + ++GLL V IV + V + K+
Sbjct: 186 AGIISSIPNAIATVREDYFVNIKSSDINHSYIVVGLLIIAVLAIV-FFTTFVQQAEYKIP 244
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---- 306
+QY KL A S Y+P +NP+G+ PV+ + + PS L L +
Sbjct: 245 IQYT--KLMQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTLLPFLQNGRNI 295
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNV 366
P+ ++ +LN +T G V+Y I F F N P++ A+ L K + IP+V
Sbjct: 296 PWLTTLQSLLNYQTPTG---MVFYAILIILFSFFYTFVQVN-PEKTAENLQKNSSYIPSV 351
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PG+ T +Y++ + G + L+ ++ + + L ++ ++G TS+LI++ +
Sbjct: 352 RPGRETEQYMSSLLKKLATVGSVFLAFISLTPIVAQQAL-NLSSSIALGGTSLLILISTG 410
Query: 427 IELRRSYQAY 436
IE + + Y
Sbjct: 411 IEGMKQLEGY 420
>gi|357639738|ref|ZP_09137611.1| preprotein translocase, SecY subunit [Streptococcus urinalis
2285-97]
gi|357588192|gb|EHJ57600.1| preprotein translocase, SecY subunit [Streptococcus urinalis
2285-97]
Length = 434
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 213/430 (49%), Gaps = 43/430 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 79
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 14 NVRHKIFYTLFIILVFRIGTHITVPGINAKSLEQLSDLPFLNMLNLVSGN--------AM 65
Query: 80 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 66 RNFSVFSMGVSPYITASIIVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFIQ 125
Query: 139 AV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++ I A ++ ++ +S +VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 126 SIGITAAFNTLSNVGLVSSPNVKTYILIGTLLTTGSVIVTWLGEQITDKGFGNGVSMIIF 185
Query: 197 VGILTGYTETLYKM----LSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGCRKVK 250
GI++ + + + S + ++GLL V IV + V + K+
Sbjct: 186 AGIISSIPNAIATVREDYFVNIKSSDINHSYIVVGLLIIAVLAIV-FFTTFVQQAEYKIP 244
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---- 306
+QY KL A S Y+P +NP+G+ PV+ + + PS L L +
Sbjct: 245 IQYT--KLMQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTLLPFLQNGKNI 295
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNV 366
P+ ++ +LN +T G V+Y I F F N P++ A+ L K + IP+V
Sbjct: 296 PWLTTLQSLLNYQTPTG---MVFYAILIILFSFFYTFVQVN-PEKTAENLQKNSSYIPSV 351
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PG+ T +Y++ + G + L+ ++ + + L ++ ++G TS+LI++ +
Sbjct: 352 RPGRETEQYMSSLLKKLATVGSVFLAFISLTPIVAQQAL-NLSSSIALGGTSLLILISTG 410
Query: 427 IELRRSYQAY 436
IE + + Y
Sbjct: 411 IEGMKQLEGY 420
>gi|67923557|ref|ZP_00517030.1| SecY protein [Crocosphaera watsonii WH 8501]
gi|67854583|gb|EAM49869.1| SecY protein [Crocosphaera watsonii WH 8501]
Length = 439
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 215/442 (48%), Gaps = 47/442 (10%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDR----RLIPQD----YLS- 64
A E+F + + +R RL +T L+++ R G FIP+PG DR R I + +L
Sbjct: 10 TAQETFLQMAQAAGLRGRLLITIGLLILIRFGIFIPIPGIDRTEFARAISDNSVLGFLDI 69
Query: 65 FVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKI 123
F G + LG F LGI P I ASI+MQ+L +P+L L+K EG G KI
Sbjct: 70 FTGGGISTLG---------IFALGILPFINASIIMQLLTAAIPALEDLQKNEGEAGRRKI 120
Query: 124 KSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTIS 183
+++ G++++++ + L YA V T L G+M + W+ + I+
Sbjct: 121 SQITRYVAAGWSVIQSTAITIGLL--RPYALGDPFWFVPETVLALTAGSMFVMWVSELIT 178
Query: 184 ESGFGQGSSLIICVGILTGYTETLYKML--SQLLGSSVRWWPFMLG-LLGVFTIVTMWAV 240
E G G G+SL+I V I+ TL + + +Q G R +G LL VF ++ + +
Sbjct: 179 ERGIGNGASLLIFVNIVASLPRTLGQTIDYAQTGG---RQAAAQVGILLLVFLVMIVGVL 235
Query: 241 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V V EG R++ L + D TE EP I G+ P++ + +L P
Sbjct: 236 VFVQEGTRRMCLLSQ-----PVVKWDGSFTEKEPAIYPKTLLGGVMPIIFASAVLILPQS 290
Query: 300 LASILGSPFWQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIFD---IANLPKEIAD 354
LA + V E+L + + RP WVY +Y+ + F+ F I N P++++
Sbjct: 291 LAGFFRND--GAVSEVLV-QVANALRPGTWVYVGVYSLLILFFSYFYASLIVN-PEDVSK 346
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 414
L KMG+ IP ++PG+ T +YL + F G + LS +AT T+++ + +
Sbjct: 347 NLKKMGSSIPGLRPGEKTKQYLEGVLNRLTFLGAIFLSFVATVPTLVEGA-TGVTTFRGL 405
Query: 415 GFTSVLIIVGSIIELRRSYQAY 436
G TS+LI+VG I+ + Q Y
Sbjct: 406 GATSLLILVGVAIDTAKQIQTY 427
>gi|406660173|ref|ZP_11068307.1| hypothetical protein B879_00307 [Cecembia lonarensis LW9]
gi|405556051|gb|EKB51020.1| hypothetical protein B879_00307 [Cecembia lonarensis LW9]
Length = 440
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 204/429 (47%), Gaps = 35/429 (8%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE-LGDFGAELK 81
F ++R R+ T +V+ R+G FI LPG D + D + G +D LG GA
Sbjct: 12 FSIEDLRIRILNTIGFLVVFRLGSFIVLPGVDPSKL-GDAPEGIFGLIDTFLG--GAFSN 68
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV- 140
S F LGI P I ASI++Q+L VP +L+KEG G ++I +++ + + +
Sbjct: 69 ASIFGLGIMPYISASIVLQLLTVGVPYFQKLQKEGESGRKRINQITRVLTIAITVAQGIG 128
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP S S+ + + LL G M W+ + I+E G G G S++I +GI+
Sbjct: 129 YITATILPTGAVMVSTSL-FMFSSLVLLSAGTMFCMWLGEKITEKGIGNGISMLIMIGII 187
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY----YGF 256
+ + + ++++L +L V V + V +TE R++ +QY G
Sbjct: 188 SRFPGAI---IAEVLSKGTSGMLLLLLEAAVLFFVVLGTVALTEATRRIPVQYAKQVVGG 244
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
K+ R+ YIP +N SG+ P++ L+ P+++A I W +I
Sbjct: 245 KVYGGQRQ---------YIPIKVNASGVMPIIFAQSLMFLPALIAQI-----WSAENDIA 290
Query: 317 N--PETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKAT 372
N T W Y ++A + LF F I P++IA+ L + G +P +KPG T
Sbjct: 291 NYIGSTFSDFTSWQYNLVFAIMIILFTFFYTAITVNPEQIAEDLKRNGGFVPGIKPGAPT 350
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--IGFTSVLIIVGSIIELR 430
+++ I + G +LLS++A L + F+ G TS+LI+VG I++
Sbjct: 351 SDFIDNIISRITLPGSILLSVVAIMPAF--AILAGVGGEFAQFYGGTSLLIMVGVIMDTL 408
Query: 431 RSYQAYNVM 439
R ++Y +M
Sbjct: 409 RQIESYLLM 417
>gi|344337589|ref|ZP_08768523.1| preprotein translocase, SecY subunit [Thiocapsa marina 5811]
gi|343802542|gb|EGV20482.1| preprotein translocase, SecY subunit [Thiocapsa marina 5811]
Length = 450
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 195/421 (46%), Gaps = 23/421 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+E+R RL +++ RIG FIP+PG + + + +D F GA + S
Sbjct: 19 TELRARLLFVVGALLVYRIGTFIPVPGVNPEALAILFDQNQGSILDMFNMFSGGALERAS 78
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI+MQ++ +VP L QL+KEG G KI Y + ++ A +AV ++
Sbjct: 79 LFALGIMPYISASIIMQLMTSVVPKLEQLKKEGESGRRKITQYTRYGTVVLATFQAVGIS 138
Query: 144 CYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+L S V H V LV G M + W+ + I+E G G G SLII G
Sbjct: 139 M-ALQGQTAGGSALVSHAGMGFVFTATVSLVTGTMFLMWLGEQITERGIGNGISLIIFAG 197
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ G L L +L + +L L + VT + V V G R++ + Y
Sbjct: 198 IVAGLPAALGGTL-ELARTGEMNSLAVLALFAMALAVTAFVVFVERGQRRITVNY----- 251
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
A + + ++P +N +G+ P + + ++ FP L GS + ++ + +
Sbjct: 252 ARRQQGRKMMQAQSTHLPLKLNMAGVIPPIFASSIILFPGTLGQWFGSS--EDMRWLADI 309
Query: 319 ETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYL 376
+ + +Y +YA + F F A + K+ AD L + GA IP ++PG+ T Y+
Sbjct: 310 TSKLSPGEPIYVLLYAAAIIFFCFFYTALVFNAKDTADNLKRSGAFIPGIRPGEQTARYI 369
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
+ G +I T+ +L +L N F G TS+LI+V +++ QA
Sbjct: 370 DTVMTRLTAAG----AIYITAVCLLPEFLIVGYNVPFYFGGTSLLIVVVVVMDFMAQVQA 425
Query: 436 Y 436
+
Sbjct: 426 H 426
>gi|363423620|ref|ZP_09311683.1| preprotein translocase subunit SecY [Rhodococcus pyridinivorans
AK37]
gi|359731558|gb|EHK80600.1| preprotein translocase subunit SecY [Rhodococcus pyridinivorans
AK37]
Length = 437
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 213/442 (48%), Gaps = 51/442 (11%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSG--SVDELGDFGAEL 80
++RR++ + L+ + R+G +P PG D + + Q S +G S+ L GA L
Sbjct: 13 DLRRKILIALGLVALYRLGATVPSPGVDYGNVQACVDQLAGSEQAGIYSLINLFSGGALL 72
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++++ A+L+A
Sbjct: 73 QLSVFAIGIMPFITASIIVQLLTVVIPRFEELRKEGQSGQAKMTQYTRYLAVALAVLQAT 132
Query: 141 -IVACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
IVA + + A S+ ++V ++ GA + W + I+E G G G SL
Sbjct: 133 GIVALAARGQLLQGCSEPILADDSIFGMVVIVLVMTAGAAVVMWFGELITERGVGNGMSL 192
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQ 252
+I GI +L G + ++ V + + VV + +G R++ +Q
Sbjct: 193 LIFAGIAAALPSEGRMILESRGG-------LVFAIVCVVALALITGVVFIEQGQRRIPVQ 245
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS------ 306
Y + S Y+P +N +G+ PV+ + LL P+++A + G+
Sbjct: 246 YAKRMVGRRMYGGS-----STYLPLKVNQAGIIPVIFASSLLYLPNLVAQLTGATTNPDP 300
Query: 307 PFWQHV--KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIP 364
+WQ + + ++NP V +Y+ + FFVF + I P+E AD + K G IP
Sbjct: 301 SWWQRIINEYLVNPNNPV--YIAIYFALIVFFVFFY--VAITFNPEERADEMKKYGGFIP 356
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI-GFTSVLIIV 423
++PG+ T EYL+ + G + L ++A T+ + +L SI G +VLI+V
Sbjct: 357 GIRPGRPTAEYLSFVLNRITVPGSIYLGLIA---TLPNFFLSGSQTASSIFGGAAVLILV 413
Query: 424 GSIIE---------LRRSYQAY 436
++ ++R+Y+ +
Sbjct: 414 SVALDTVKQIESQLMQRNYEGF 435
>gi|402756103|ref|ZP_10858359.1| preprotein translocase subunit SecY [Acinetobacter sp. NCTC 7422]
Length = 452
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 207/428 (48%), Gaps = 34/428 (7%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR +F+ L+V R+G IPLPG D + F + LG F GA
Sbjct: 23 YREIIRRLMFLIGALLVF-RLGAHIPLPGIDNVALAH---FFKANEGTFLGLFNMFSGGA 78
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ +VPSL L+KEG G KI Y + +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKINQYTRYGTLFLALVQ 138
Query: 139 AVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ + + I S +V VT+ LV G M + W+ + I+E G G G S+II
Sbjct: 139 GIGMCAGLISQGITLTSGLAFYVPAVTS--LVAGTMFLMWLGEQITERGVGNGISMIIFA 196
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYY 254
GI+ G L ++ Q S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 197 GIVAG----LPNLVIQSFTSVQNGQGSLIGLVVFGLLSLAVLAAIVFIEKAQRRIPVNY- 251
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS--PFWQHV 312
A + T + ++P IN +G+ P + + LL FP+ L LGS P V
Sbjct: 252 ----AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGIV 307
Query: 313 KEILNPETSV--GARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKP 368
K L V +P +Y ++ + F F A + PKE+++ L + GA +P ++P
Sbjct: 308 KRSLQDLALVLSPGQP-LYLMLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRP 366
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G+ T YL I F G + ++++ +L F +G TS+LI+V +++
Sbjct: 367 GEQTARYLDHILNRLTFIGAIYITVVCLMPMVLQ---SSFGIPFHLGGTSLLIVVVVVMD 423
Query: 429 LRRSYQAY 436
QA+
Sbjct: 424 FMAQLQAH 431
>gi|260427858|ref|ZP_05781837.1| preprotein translocase, SecY subunit [Citreicella sp. SE45]
gi|260422350|gb|EEX15601.1| preprotein translocase, SecY subunit [Citreicella sp. SE45]
Length = 448
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 199/430 (46%), Gaps = 45/430 (10%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGDFGAELK 81
+++R R+ T L+++ R+G +IP+PG D R + Q G + + GA +
Sbjct: 14 TDLRNRILFTLGLLIVYRLGTYIPVPGIDGAALRNFMEQAGQGI--GGMVSMFTGGALGR 71
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+ F LGI P I ASI++Q+L +VP L QL+KEG G +KI Y + ++ A+ +A
Sbjct: 72 MGIFALGIMPYISASIIVQLLAAMVPFLEQLKKEGEQGRKKINQYTRYGTVALALFQA-- 129
Query: 142 VACYSLPYSIYAA--SHSVKHVMVTAFL--LVCGAMTMSWICDTISESGFGQGSSLIICV 197
Y L S+ A +H A + LV G M + W+ + I+ G G G SLII V
Sbjct: 130 ---YGLAVSLEAGDLAHDPGWYFRAAVVITLVGGTMFLMWLGEQITARGIGNGISLIIFV 186
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQY--- 253
GI+ L + + G S P +LG + + +V M+ V + RK+ +QY
Sbjct: 187 GIVAEIPAALAQFFAS--GRSGAISPAIILGAIVMVVLVIMFVVFMERALRKITIQYPRR 244
Query: 254 -YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA--SILGS--PF 308
G K+ A + ++P +NP+G+ P + + LL P+ +A S GS P
Sbjct: 245 QVGMKMTEAQQS---------HLPVKVNPAGVIPAIFASSLLLLPTTIATFSQAGSTGPV 295
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFL--FNIFDIANLPKEIADYLNKMGARIPNV 366
+ P +P A VF F F+++ P E+AD L IP +
Sbjct: 296 MSTILAYFGP-----GQPLYLLFFAAMIVFFAYFYTFNVSFKPDEVADNLKNQNGFIPGI 350
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PGK T ++L + G L+ + IL + F G TSVLI+V
Sbjct: 351 RPGKKTADHLEYVVNRILVLGSAYLAAVCLMPEILRS---QFAIPFYFGGTSVLIVVSVT 407
Query: 427 IELRRSYQAY 436
++ + Q++
Sbjct: 408 MDTIQQIQSH 417
>gi|222529711|ref|YP_002573593.1| preprotein translocase subunit SecY [Caldicellulosiruptor bescii
DSM 6725]
gi|312622064|ref|YP_004023677.1| preprotein translocase, secy subunit [Caldicellulosiruptor
kronotskyensis 2002]
gi|222456558|gb|ACM60820.1| preprotein translocase, SecY subunit [Caldicellulosiruptor bescii
DSM 6725]
gi|312202531|gb|ADQ45858.1| preprotein translocase, SecY subunit [Caldicellulosiruptor
kronotskyensis 2002]
Length = 435
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 215/449 (47%), Gaps = 70/449 (15%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
++RR++ T +I++ R+G FIP+P DR D L+ V + LG F G
Sbjct: 13 DLRRKILFTLFMILVFRLGAFIPVPYIDR-----DALAKVINDLTMLGFFDVVAGGTFKN 67
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F + ++P I +SI+MQ+L +P+L +L K+G +G +K+ W G AIL
Sbjct: 68 MSIFAMSVTPYINSSIIMQLLTIAIPALEELAKQGEEGRKKLAE---WTRYGTAILA--F 122
Query: 142 VACYSLPYSIYAASHSVKHV-MVTA----FL--------LVCGAMTMSWICDTISESGFG 188
+ + + + AS V ++TA FL L G + + WI + I+E+G G
Sbjct: 123 IQAVGIYFGLKNASGLTGGVPVITAQGQGFLGFITITIALTAGTVFLMWIGEQITENGIG 182
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGL--------LGVFTIVTM--- 237
G SL+I GI+ S++ +V W ++ L +GV + M
Sbjct: 183 NGISLLIFAGII-----------SRIPNGAVSLWNYVAKLNEFSLTSIIGVILFIVMALA 231
Query: 238 ---WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLL 294
+ +V+ EG R++ +QY A +IP +N +G+ P++ L+
Sbjct: 232 IIVFIIVIQEGERRIPVQY-----AKRVVGRRVYGGQSTHIPIKVNIAGVIPIIFAISLV 286
Query: 295 AFPSILASIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKE 351
P+ +A S F++ VK + + W Y YA F+ F F A + P E
Sbjct: 287 MLPTTIAQFFPNSGFYKFVKAYFSSGSF-----W-YTFFYALFIIGFTYFYTAIVFNPVE 340
Query: 352 IADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILD-HYLRRINE 410
IA+ L G IP ++PGK T++++T++ + F G L L+ +A T++ + ++N
Sbjct: 341 IANNLKNNGGFIPGIRPGKPTVDFITRVLSKVTFAGALFLAFIAILPTLVGIMFKHQLNI 400
Query: 411 GFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
F G TS+LI+VG +E R +A +M
Sbjct: 401 YF--GGTSLLIVVGVALETIRQMEAQMLM 427
>gi|160894735|ref|ZP_02075510.1| hypothetical protein CLOL250_02286 [Clostridium sp. L2-50]
gi|156863669|gb|EDO57100.1| preprotein translocase, SecY subunit [Clostridium sp. L2-50]
Length = 437
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 194/388 (50%), Gaps = 20/388 (5%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG-SVDELGDF--G 77
+F E+R++L T ++++ R+G I +PG I ++YLS G S + F G
Sbjct: 7 NAFKVKELRQKLLYTFFVLIVVRLGSLITVPGIRADAI-KEYLSNALGDSFNLFSSFTGG 65
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
+ ++S F L ++P I ASI++Q+L +P+L +++K+G DG +KI + ++++G AIL
Sbjct: 66 SFDQMSIFALNVTPYITASIIIQLLTIAIPALEEMQKDGEDGRKKITAITRFLTIGLAIL 125
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
E+ +A + + S++ V+ +L G+ + W+ + +++ G G G S+I+ +
Sbjct: 126 ESAGLAI-NFGRKGFMDSYNFWTVLTMIVILTGGSAFVMWLGERVTDRGVGNGISIILLI 184
Query: 198 GILTGYTETLYKMLSQLLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
I++ + +Q + VR L ++ + VT+ ++ RK+ +QY
Sbjct: 185 NIVSTMPNDFKNIYTQFIKDKDPVRMCLIALLVVAIVVCVTILVCMLQGAERKIPVQY-- 242
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-SPFWQHVKE 314
A + + IP +N +G+ PV+ + L+A PSI+ S+ G SP K
Sbjct: 243 ---AKKVQGRKQMGGQSSNIPLKVNTAGVIPVIFASSLMAIPSIITSLFGKSPSGVGAKI 299
Query: 315 ILNPETSV---GARPWVY--YTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVK 367
+ S PW + +Y VF F F I P EIA+ + K G +P ++
Sbjct: 300 LQGMSQSYWFNANYPWGFLGLAVYILLVFFFAYFYTAITFNPMEIANNMKKSGGFVPGIR 359
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILA 395
PGK T +YL KI F G + L I+A
Sbjct: 360 PGKPTQDYLNKILNYIIFIGAVGLLIVA 387
>gi|59710864|ref|YP_203640.1| preprotein translocase subunit SecY [Vibrio fischeri ES114]
gi|197334051|ref|YP_002155016.1| preprotein translocase subunit SecY [Vibrio fischeri MJ11]
gi|423684974|ref|ZP_17659782.1| preprotein translocase subunit SecY [Vibrio fischeri SR5]
gi|59478965|gb|AAW84752.1| preprotein translocase membrane subunit [Vibrio fischeri ES114]
gi|197315541|gb|ACH64988.1| preprotein translocase, SecY subunit [Vibrio fischeri MJ11]
gi|371496021|gb|EHN71615.1| preprotein translocase subunit SecY [Vibrio fischeri SR5]
Length = 443
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 203/439 (46%), Gaps = 21/439 (4%)
Query: 18 NAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF- 76
N+A+S R LFV L+V R G F+P+PG D ++ D G++ EL +
Sbjct: 10 NSAQSGLAELKSRLLFVIGALLVF-RAGSFVPIPGIDAAVL-ADLFEQQQGTIIELFNMF 67
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA + S LGI P I ASI++Q+L + P L +L+KEG G KI Y + +L
Sbjct: 68 SGGALSRASILALGIMPYISASIVVQLLTVVHPPLAELKKEGESGRRKINQYTRYGTLVL 127
Query: 135 AILEAVIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
A +A+ +A LP I A+ + + LV G M + W+ + I+E G G G S
Sbjct: 128 ATFQAIGIAT-GLPSMIPGLVANPDMMFYLTATVSLVTGTMFLMWLGEQITERGIGNGIS 186
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKL 251
LII GI+ G + + + Q + +L L+ V + ++ VV E G R++ +
Sbjct: 187 LIIFTGIVAGLPPAIGETIQQARQGELHVL--LLLLIAVISFAVIYFVVFMERGQRRIVV 244
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
Y A + ++P IN +G+ P + + ++ FP LA G
Sbjct: 245 NY-----AKRQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGGNGEGT 299
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 369
+ + ++ +Y +YA + F F A + P+E AD L K GA +P ++PG
Sbjct: 300 FGWLTDVSMALSPGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPG 359
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
+ T +Y+ K+ G + ++ + I + + N F G TS+LI+V I++
Sbjct: 360 EQTTKYIDKVMTRLTLAGAMYITFIC---LIPEFMMIAWNVRFYFGGTSLLIVVVVIMDF 416
Query: 430 RRSYQAYNVMPSLSKALRR 448
Q + + L++
Sbjct: 417 MAQVQTHLMSQQYESVLKK 435
>gi|402836638|ref|ZP_10885172.1| preprotein translocase, SecY subunit [Mogibacterium sp. CM50]
gi|402270557|gb|EJU19817.1| preprotein translocase, SecY subunit [Mogibacterium sp. CM50]
Length = 426
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 222/443 (50%), Gaps = 40/443 (9%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD-- 71
+L ++++ EIR ++ T ++++I RIG IP+PG +R + Q + +G +D
Sbjct: 2 ELLKTLSKAWHVKEIRAKILFTLMIMLIFRIGSNIPVPGINRDYLAQMFKG-QTGLLDLF 60
Query: 72 ELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+L GA + F L I+P + ASI++Q+L P +L KEG +G +K+ + +++
Sbjct: 61 DLFSGGAFSNFTIFALSITPYVTASIIVQLLTIAFPYFERLSKEGNEGRKKMATITRYLT 120
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+ +++A + +I + S ++V +L G + W+ + I+E G G G
Sbjct: 121 IVLGLIQATGLTIGLFRRAI--VNRSAFSMIVIIMVLTAGTAFLMWLGEQINEYGVGNGI 178
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SLII GI+ + + +Q+ ++ + ++ V ++T+ +++ +G RK+ +
Sbjct: 179 SLIIFGGIIARIPTAIRGIHTQVKEGALSVVAVIALVI-VAVLITVVIILMQQGTRKIPV 237
Query: 252 QY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASILGS 306
QY G K+ +IP +N +G+ P++ + LL FP +I + S
Sbjct: 238 QYAKRMVGRKMYGGQ---------STHIPMKVNQAGVIPIIFSLSLLQFPLTITYFVPQS 288
Query: 307 PFWQHVKEILNPETSVGARPWVY----YTIYAFFVFLFNIFDIANLPKEIADYLNKMGAR 362
F + + + L+P G WVY T+ FF + + I P+E+AD + + G
Sbjct: 289 AFAKWMSKYLSPSGDPGI--WVYAILNITLTLFFTYFYT--AITFKPEEVADNMRQSGGF 344
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
+P ++PG AT EYL++I + F GG+ L+ +AT T++ + S G TS+LI
Sbjct: 345 VPGIRPGAATEEYLSRIMSRLCFVGGVFLAAVATIPTVMSEF---TPLQLSFGGTSLLIA 401
Query: 423 VGSIIE---------LRRSYQAY 436
VG ++ L R+YQ +
Sbjct: 402 VGVALDTVQQIENQMLNRNYQGF 424
>gi|421078713|ref|ZP_15539663.1| preprotein translocase, SecY subunit [Pelosinus fermentans JBW45]
gi|392523189|gb|EIW46365.1| preprotein translocase, SecY subunit [Pelosinus fermentans JBW45]
Length = 418
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 209/429 (48%), Gaps = 45/429 (10%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
+E+R+++ T + ++ R G IP+PG D +I Q F SG++ L D GA K
Sbjct: 12 TELRQKVVFTLAMFLVFRAGTHIPVPGVDVSVIEQ---MFTSGNLFGLLDLFSGGALSKF 68
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F + I+P I ASI+MQ++ +VP+ Q KEG +G +K+ + ++ ++A+ +
Sbjct: 69 SIFAMSITPYINASIIMQLITIVVPTFEQWSKEGEEGRKKLTQITRYGTVLLGFIQAIGM 128
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
A L +I + + ++ A L G + W+ + I+E G G G SLII GI++
Sbjct: 129 AI-GLKAAII--NPGIASTLLIALTLTAGTTFLMWLGEQITEKGIGNGISLIIFAGIVSR 185
Query: 203 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV----VTEGCRKVKLQYYGFKL 258
+ LY + L ++ + +L F I+ + +V +T+G R++ +QY
Sbjct: 186 LPDGLYMLYEYLTAGTINIFNVLL-----FAIIALAMIVLVIAITQGQRRIPVQY----- 235
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
A +IP +N +G+ P++ + +L FP +A + +I
Sbjct: 236 AKRVVGRKTYGGHSTHIPLKVNQAGVIPIIFASSVLMFPVTIAQFV---------DIAWV 286
Query: 319 ETSVGARPW---VYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKMGARIPNVKPGKAT 372
+T G W + +YA + F F A N+ ++A+ + K G IP ++PGK T
Sbjct: 287 KTVAGYFAWGTPLQTALYALLIIFFTYFYTAVTLNI-SDMAENMKKYGGFIPGLRPGKPT 345
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINE--GFSIGFTSVLIIVGSIIELR 430
+YL ++ G + L+ +A IL +++ + G + G T++LI+VG ++
Sbjct: 346 ADYLDRVMTRITLAGSIFLAGIA----ILPNFIAAVTNIPGLNFGGTALLIVVGVALDTM 401
Query: 431 RSYQAYNVM 439
+ +A +M
Sbjct: 402 KQIEAIVLM 410
>gi|374619078|ref|ZP_09691612.1| protein translocase subunit secY/sec61 alpha [gamma proteobacterium
HIMB55]
gi|374302305|gb|EHQ56489.1| protein translocase subunit secY/sec61 alpha [gamma proteobacterium
HIMB55]
Length = 441
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 211/437 (48%), Gaps = 44/437 (10%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVD 71
+NNA E+ RL V ++I RIG IP+PG D L Q+ G++
Sbjct: 8 MNNAG----MGELFSRLRFVLVALIIYRIGTHIPVPGIDPAQLSALFDQN-----QGTIL 58
Query: 72 ELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
L + GA ++S LGI P I ASI+MQ++ + P L ++KEG G +KI +
Sbjct: 59 GLANVFSGGALERMSILALGILPYISASIIMQLMTAVTPELDAIKKEGESGRKKISQWTR 118
Query: 129 WISLGFAILEA----VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
++++G A+++ V +A L Y AS + +T+ LV GA+ M W+ + I+E
Sbjct: 119 YLTVGLALVQGTGMTVGLANQGLTYD---ASLGFYVIAITS--LVTGAVFMMWLGEQITE 173
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G G SL+I GI+ G + + + L Q + +LG+L + +V + +
Sbjct: 174 KGIGNGISLLIFAGIVAGLPQAIGQSLEQARQGELNIL-ILLGVLALAIVVIALVIFIER 232
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEP--YIPFNINPSGMQPVLTTTYLLAFPSILAS 302
G R++ + Y A R+ P ++P +N +G+ P + + +L FP+ +A
Sbjct: 233 GQRRITVNY-------AKRQQGRQMYQAPASHLPLKVNMAGVIPAIFASSILLFPASVAQ 285
Query: 303 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMG 360
GS + + ++G + ++ F+ F F A + P E+AD L K G
Sbjct: 286 WFGSA--DSSDWLQDLAVAIGPGQPLNIILFTGFIVFFCFFYTALMFNPSEVADNLKKSG 343
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSV 419
A +P ++PG+ T Y+ + +G ++++ +L +L + N F +G TS+
Sbjct: 344 AFVPGIRPGQQTANYIDGVLTRLTIFGSAYIALVC----LLPQFLVVMFNVPFYLGGTSM 399
Query: 420 LIIVGSIIELRRSYQAY 436
LI+V +++ Q++
Sbjct: 400 LIVVVVVMDFMAQVQSH 416
>gi|154505149|ref|ZP_02041887.1| hypothetical protein RUMGNA_02662 [Ruminococcus gnavus ATCC 29149]
gi|336433144|ref|ZP_08612970.1| preprotein translocase [Lachnospiraceae bacterium 2_1_58FAA]
gi|153794628|gb|EDN77048.1| preprotein translocase, SecY subunit [Ruminococcus gnavus ATCC
29149]
gi|336017106|gb|EGN46874.1| preprotein translocase [Lachnospiraceae bacterium 2_1_58FAA]
Length = 443
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 216/453 (47%), Gaps = 30/453 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L ++F +IR+RLF T +++++ R G +P PG D I S +G+
Sbjct: 1 MLKTVRKAFQIEDIRKRLFYTFLMLIVVRFGSQLPTPGVDPTYIQNLLASQNNGAYSFFD 60
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
F G+ ++S F L I+P I +SI+MQ+L +P L +++KEG +G +KI + ++++
Sbjct: 61 AFTGGSFTRMSVFALSITPYITSSIIMQLLTIAIPKLEEMQKEGAEGRKKIAAITRYVTV 120
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
A++E++ ++ + + V +V + L G+ + WI + I+E G G G S
Sbjct: 121 ALALIESIAMSIGFGRQGLLEEFNFV-NVAIVVCTLTAGSAFLMWIGERITEKGVGNGIS 179
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFM--LGLLGVFTIVTMWAVVVTEGCRKVK 250
+++ + IL+ + +Q + M + +L + V ++ +++ +G R++
Sbjct: 180 IVLLINILSRVPNDFVTLYTQFIKGKTLAKGAMAAIIILAILLAVVLFVIILQDGERRIA 239
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL----GS 306
+QY + + +IP +N SG+ PV+ + L+ FP ++A L G+
Sbjct: 240 VQY-----SQKVQGRRTYGGKATHIPLKVNTSGVIPVIFASSLMQFPIVIAQFLGKGDGN 294
Query: 307 PFWQHVKEILNPET---------SVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLN 357
+ + +N S+G ++ TI FF + + I P EIA+ +
Sbjct: 295 GWGSQILRTMNSNNWCDPDNLVYSIGLIIYIALTI--FFAYFYT--SITFNPLEIANNMK 350
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++PGK T+EYL I F G L I+ + S G T
Sbjct: 351 KSGGFIPGIRPGKPTVEYLQTILNRIVFIGACGLVIVQVVPFFFNGVF---GANVSFGGT 407
Query: 418 SVLIIVGSIIELRRSYQAYNVMPSLSKALRRYG 450
S++IIVG ++E + ++ ++ + S L G
Sbjct: 408 SLIIIVGVVLETIKKIESQMLVRNYSGFLSSKG 440
>gi|239905878|ref|YP_002952617.1| preprotein translocase subunit SecY [Desulfovibrio magneticus RS-1]
gi|239795742|dbj|BAH74731.1| preprotein translocase secY subunit [Desulfovibrio magneticus RS-1]
Length = 437
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 199/422 (47%), Gaps = 29/422 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E++++L T +L+ + RIG +P+PG D + D+ ++ L D G LS
Sbjct: 14 ELKKKLLWTFLLVAVYRIGVHVPVPGVDSAAL-ADFFESAKNTLFGLFDMFSGGGLRNLS 72
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILEAVIV 142
F LGI P I ASI++Q+L + P L +++KE G G +KI Y + ++ ++ +
Sbjct: 73 IFALGIMPYISASIIIQLLTVVSPELAKMQKEEGAAGKKKITQYTRYGTVLITCIQGFGI 132
Query: 143 ACYSLPYSIYAASHSV-----KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
A + + V ++T L G + + W+ + ++E G G G SLII
Sbjct: 133 AVGLESMASPTGAPVVLMPGWGFRLMTIITLCAGTVFLMWLGEQLTEKGIGNGISLIIYS 192
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGF 256
GI+ G + L + P ML L+ + + A+V E G R++ +QY
Sbjct: 193 GIVAGLPRAVLSTFDLLKAGELS--PLMLILIVALMLAVLVAIVFMERGQRRIPIQY-AK 249
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
++ T ++P +N +G+ P + + +L FP+ L P+ + V +
Sbjct: 250 RMVGRKMYGGQTT----HLPLRVNTAGVIPPIFASSILLFPATLGEFSSVPWLKTVASLF 305
Query: 317 NPETSVGARPWVYYTIYAFFVFLFN--IFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
+P+T ++ + FF + + IFD P +IA+ + K G IP ++PG T E
Sbjct: 306 SPQTM--TYNVIFIALIVFFCYFYTAIIFD----PNDIAENIRKQGGFIPGIRPGAKTKE 359
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ K+ WG + +S + +L +++ N F G TS+LI+VG ++ +
Sbjct: 360 YIDKVLVRITLWGSMYISAVCVLPMML---IQQFNVPFYFGGTSLLIVVGVAMDFMSQIE 416
Query: 435 AY 436
+Y
Sbjct: 417 SY 418
>gi|410664358|ref|YP_006916729.1| preprotein translocase subunit SecY [Simiduia agarivorans SA1 = DSM
21679]
gi|409026715|gb|AFU98999.1| preprotein translocase subunit SecY [Simiduia agarivorans SA1 = DSM
21679]
Length = 438
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 198/422 (46%), Gaps = 28/422 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS-FVSGSVDELGDF-----GAE 79
E+ RL + IV+ RIG IP+PG D P+ S F LG F GA
Sbjct: 14 GELWARLRFLFLAIVVYRIGTHIPVPGLD----PERLASLFNQNQGTILGLFNMFSGGAL 69
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
++S LGI P I ASI++Q++ + PSL QL+KEG G KI Y + ++ A +
Sbjct: 70 ERMSILALGIMPYISASIIIQMMTAVTPSLEQLKKEGDAGRRKISQYTRYFTVILATFQG 129
Query: 140 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
+ +A Y + LV GA+ M W+ + ++E G G G S++I GI
Sbjct: 130 IAMAV-GFSGQAYGGEPGFSFYFIAVVSLVTGAVFMMWLGEQVTERGIGNGISMLIFAGI 188
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGV--FTIVTMWAVV-VTEGCRKVKLQYYGF 256
+ G L + Q S+ + +L LL + ++ +W VV V G R++ + Y
Sbjct: 189 VAG----LPSAIGQSFESARQGDLHILMLLAIAFLAVLIVWFVVRVERGQRRITVNY--- 241
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
A + + ++P +N +G+ P + + LL FP+ ++S G + +
Sbjct: 242 --AKRQQGRHAMPAQSSHLPLKVNMAGVIPPIFASSLLLFPASISSWFGQGDGAGSEVLQ 299
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
++G + + ++A + F F A + PKE+AD L K GA IP ++PG+ + +
Sbjct: 300 EIALAIGPGQPLNFILFAGMIIFFTFFYTALMFNPKEVADNLKKSGAYIPGIRPGEQSAK 359
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ ++ G L ++ + L + N F +G TS+LI+V I++ Q
Sbjct: 360 YIDQVLTRLTVVGSLYMAAVCLLPQFLIVF---TNVPFYLGGTSLLIVVVVIMDFMSQVQ 416
Query: 435 AY 436
A+
Sbjct: 417 AH 418
>gi|393778228|ref|ZP_10366508.1| preprotein translocase, membrane component, transport across inner
membrane [Ralstonia sp. PBA]
gi|392714782|gb|EIZ02376.1| preprotein translocase, membrane component, transport across inner
membrane [Ralstonia sp. PBA]
Length = 448
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 203/438 (46%), Gaps = 33/438 (7%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
+ L A + ++RRRL + +++ RIG IP+PG D + Q + S G +
Sbjct: 7 NALAQAKNTAKYGDLRRRLVFLVLALIVYRIGAHIPVPGIDPDQLAQLFQSQSGGILGMF 66
Query: 74 GDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
F GA + + F LGI P I ASI+MQ+L +VP L L+KEG G KI Y + +
Sbjct: 67 NLFSGGALSRFTIFALGIMPYISASIIMQLLAIVVPQLEALKKEGQAGQRKITQYTRYGT 126
Query: 132 LGFAILEA--VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
L A+ +A + VA S P + + M LV G M + W+ + I+E G G
Sbjct: 127 LVLALFQAFGIAVALESQPGLVL--DPGLMFRMTAVVTLVTGTMFLMWLGEQITERGLGN 184
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
G SLII GI G + + +L+ + + ++ + VT V + G R++
Sbjct: 185 GISLIIFAGIAAGLPNAIGGLF-ELVRTGAMSIISAIIIVAIVIAVTYLVVFIERGQRRI 243
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP-- 307
+ Y ++ + ++P +N +G+ P + + ++ FP+ +A S
Sbjct: 244 LVNYAKRQVGNKVYGGQ-----SSHLPLKLNMAGVIPPIFASSIILFPATIAGWFASGDQ 298
Query: 308 ------FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKM 359
F + + L P +P VY +YA + F F A + +E+AD L K
Sbjct: 299 ASGVGRFIRDLAATLAP-----GQP-VYIMLYAAAIIFFCFFYTALVYNSREVADNLKKS 352
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTS 418
GA IP ++PG+ T Y+ KI G + ++++ +L +L R N F G TS
Sbjct: 353 GAFIPGIRPGEQTTRYIDKILVRLTLAGAIYITLVC----LLPEFLVLRWNVPFYFGGTS 408
Query: 419 VLIIVGSIIELRRSYQAY 436
+LIIV ++ Q+Y
Sbjct: 409 LLIIVVVTMDFMAQVQSY 426
>gi|325981825|ref|YP_004294227.1| preprotein translocase subunit SecY [Nitrosomonas sp. AL212]
gi|325531344|gb|ADZ26065.1| preprotein translocase, SecY subunit [Nitrosomonas sp. AL212]
Length = 443
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 132/448 (29%), Positives = 209/448 (46%), Gaps = 42/448 (9%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
N + F S+++RRL+ + +++ RIG +P+PG D ++ + S SG + F
Sbjct: 8 NKPVDKF--SDLKRRLWFLLLALIVYRIGAHVPVPGIDSIVLKDLFESQESGVLGMFNMF 65
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA + S F LGI P I ASI+MQ+ VP L L+KEG +G KI Y + +L
Sbjct: 66 SGGALSRFSIFALGIMPYISASIIMQLGTVAVPYLEALKKEGENGRRKITQYTRYGTLAL 125
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMV---------TAFLLVCGAMTMSWICDTISES 185
A++++ Y I A S +++ T LV G + + W+ + I+E
Sbjct: 126 ALVQS---------YGISIALQSQNGLVIEPGGMFTLTTVITLVTGTIFLMWLGEQITER 176
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G G SLII GI G + L L+ + + LG+ +VT + V V +G
Sbjct: 177 GIGNGISLIIFAGIAAGLPSAIGGTL-DLVSTGSMHFIIALGIFIAAALVTWFVVFVEKG 235
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
R++ + Y ++ ++P IN +G+ P + + ++ FP+ LA
Sbjct: 236 QRRILVNYAKRQIGQKIYGGQ-----SSHLPLKINMAGVIPPIFASSIILFPATLAGW-- 288
Query: 306 SPFWQHVKEILNPETSVGARPW--VYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGA 361
F + I+ + S P +Y +YA + F F A + PKE AD L K GA
Sbjct: 289 --FANNESMIILRDISAALAPGQPIYVMLYAIMIIFFCFFYTALVFNPKETADNLKKSGA 346
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVL 420
IP ++PG+ T Y+ KI G SI T +L +L + N F G TS+L
Sbjct: 347 FIPGIRPGEQTTRYIEKIMLRLTLAG----SIYVTLVCLLPEFLILKWNVPFYFGGTSLL 402
Query: 421 IIVGSIIELRRSYQAYNVMPSLSKALRR 448
IIV ++ Q++ VM S +L +
Sbjct: 403 IIVIVTMDFMSQVQSH-VMSSQYDSLLK 429
>gi|126461155|ref|YP_001042269.1| preprotein translocase subunit SecY [Rhodobacter sphaeroides ATCC
17029]
gi|429207712|ref|ZP_19198968.1| Preprotein translocase secY subunit [Rhodobacter sp. AKP1]
gi|126102819|gb|ABN75497.1| protein translocase subunit secY/sec61 alpha [Rhodobacter
sphaeroides ATCC 17029]
gi|428189105|gb|EKX57661.1| Preprotein translocase secY subunit [Rhodobacter sp. AKP1]
Length = 452
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 194/417 (46%), Gaps = 20/417 (4%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+++R+R+F T L+++ R+G +IP+PG D + Q S +G L F GA ++
Sbjct: 21 TDLRQRIFFTIGLLMVYRLGTYIPVPGIDGSALRQFMDSATAGIGGMLNMFTGGAISRMG 80
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q++ +VP L QL+KEG G +KI Y + ++ A +A +A
Sbjct: 81 IFALGIMPYISASIIVQLMASMVPKLEQLKKEGEQGRKKINQYTRYGTVFLATFQAWGIA 140
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
SL + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 141 M-SLEAGDLVTDPGMFFRAACVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEI 199
Query: 204 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
L + LSQ G S P ++G++ + V + V + RK+ +QY ++
Sbjct: 200 PAHLAQFLSQ--GRSGAISPAVIVGVIAMVIAVITFVVFMERALRKIHIQYPRRQVGMKV 257
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSV 322
+ ++P +NP+G+ P + + LL P +++ G + IL
Sbjct: 258 YDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGQQTGPVMSTIL---AYF 309
Query: 323 GARPWVYYTIYAFFVFLFNIFDIANLP---KEIADYLNKMGARIPNVKPGKATIEYLTKI 379
G +Y +A + F F AN+ ++A+ L IP ++PGK T EYL +
Sbjct: 310 GPGQPLYLLFFAGMIVFFAYFYTANVAFKVDDVAENLKNQNGFIPGIRPGKKTEEYLEYV 369
Query: 380 QASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
G L+ + IL + L F G TSVLI+V ++ Q++
Sbjct: 370 VNRILVLGSAYLAAVCLLPEILRNQL---GIPFYFGGTSVLIVVSVTMDTINQVQSH 423
>gi|291549399|emb|CBL25661.1| protein translocase subunit secY/sec61 alpha [Ruminococcus torques
L2-14]
Length = 440
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 216/431 (50%), Gaps = 38/431 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAEL 80
+IR+RL T ++++ R+G +P PG D I Q++ + +G D F G+
Sbjct: 12 EDIRKRLLYTLAMLIVVRLGSQLPTPGVDPTFI-QNFFAQQTG--DAFNFFEAFTGGSFT 68
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
++S F L I+P I +SI+MQ+L +P L +++K+G DG +KI + ++++G A++E++
Sbjct: 69 RMSVFALSITPYITSSIIMQLLTIAIPKLEEMQKDGEDGRKKIAAITRYVTVGLALIESI 128
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+A + + V +V L G+ + WI + I+E G G G S+++ + I+
Sbjct: 129 AMAVGFGRQGLLEEYNFVNCAIVVC-TLTAGSAFLMWIGERITEKGVGNGISIVLLINIV 187
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
+ + + +Q + + G +L V +V ++ +++ +G R++ +QY
Sbjct: 188 SRVPDDFVTLYTQFMKGKTIAKAGLAGVIILAVLLVVVVFVIILQDGERRIAVQY----- 242
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV-KEIL- 316
+ + +IP +N +G+ PV+ ++ L+ P ++A LG + +IL
Sbjct: 243 SKKVQGRKMYGGQSTHIPLKVNTAGVIPVIFSSSLMQTPIVIAQFLGKGNGTGIGSKILA 302
Query: 317 -----------NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
NP SVG ++ TI FF + + I P EIA+ + K G IP
Sbjct: 303 GLNSNNWCDPENPIYSVGLVVYILLTI--FFAYFYT--SITFNPMEIANNMKKSGGFIPG 358
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVG 424
++PGK T++YLTKI F G L I+ ++ ++ + S G TS++IIVG
Sbjct: 359 IRPGKPTVDYLTKILNYIIFVGACGLIIVQ----VIPYFFNGVFGANVSFGGTSLIIIVG 414
Query: 425 SIIELRRSYQA 435
++E + ++
Sbjct: 415 VVLETIKKIES 425
>gi|343492614|ref|ZP_08730975.1| preprotein translocase subunit SecY [Vibrio nigripulchritudo ATCC
27043]
gi|342827064|gb|EGU61464.1| preprotein translocase subunit SecY [Vibrio nigripulchritudo ATCC
27043]
Length = 446
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 203/441 (46%), Gaps = 22/441 (4%)
Query: 18 NAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF- 76
+A+S R LFV L+V R G F+P+PG D ++ D G++ E+ +
Sbjct: 10 RSAQSGLAELKSRLLFVLGALLVF-RAGSFVPIPGIDAAVLA-DLFEQQKGTIVEMFNMF 67
Query: 77 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA + S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L
Sbjct: 68 SGGALERASILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVL 127
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFL---LVCGAMTMSWICDTISESGFGQGS 191
A +A+ +A +LP + + M T LV G M + W+ + I+E G G G
Sbjct: 128 ATFQAIGIAT-ALPSMVTGQLVVIDQTMFTVIATISLVTGTMFLMWLGEQITERGIGNGI 186
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SLII GI+ G + + + Q + +L + F ++ + V + G R++ +
Sbjct: 187 SLIIFAGIVAGLPSAIGQTIEQARQGELNVLLLLLIAVLAFAVI-YFVVFMERGQRRIVV 245
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
Y A + ++P IN +G+ P + + ++ FP LA G+ +
Sbjct: 246 NY-----AKRQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGNTGGED 300
Query: 312 VKEILNPETSVGARPW--VYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVK 367
+ S+ P +Y +YA + F F A + P+E AD L K GA +P ++
Sbjct: 301 SAFSWLTDVSLALSPGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIR 360
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PG+ T +Y+ K+ G L ++ + I + + N F G TS+LI+V I+
Sbjct: 361 PGEQTAKYIDKVMTRLTLAGALYITFIC---LIPEFMMIAWNVRFYFGGTSLLIVVVVIM 417
Query: 428 ELRRSYQAYNVMPSLSKALRR 448
+ Q + + L++
Sbjct: 418 DFMAQVQTHLMSQQYDSVLKK 438
>gi|262280205|ref|ZP_06057989.1| secretion protein [Acinetobacter calcoaceticus RUH2202]
gi|262257983|gb|EEY76717.1| secretion protein [Acinetobacter calcoaceticus RUH2202]
Length = 452
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 211/432 (48%), Gaps = 42/432 (9%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 23 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFQANQGTI--LGLFNMFSGGA 78
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 138
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
AV + C L S ++ + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 AVGM-CAGLIGQGITLSVGLEFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 197
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 255
I++G L ++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 198 IVSG----LPNLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 251
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP-------- 307
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADANAGLIK 308
Query: 308 -FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
Q + +L+P +P +Y ++ + F F A + PKE+++ L + GA +P
Sbjct: 309 RSLQDLALVLSP-----GQP-LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVP 362
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG+ T YL I F G + ++++ IL FS+G TS+LI+V
Sbjct: 363 GIRPGEQTARYLDHILNRLTFIGAIYITVICLMPMILQ---SSFGIPFSLGGTSLLIVVV 419
Query: 425 SIIELRRSYQAY 436
+++ QA+
Sbjct: 420 VVMDFMAQLQAH 431
>gi|429744128|ref|ZP_19277639.1| preprotein translocase, SecY subunit [Neisseria sp. oral taxon 020
str. F0370]
gi|429163628|gb|EKY05835.1| preprotein translocase, SecY subunit [Neisseria sp. oral taxon 020
str. F0370]
Length = 426
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 205/429 (47%), Gaps = 22/429 (5%)
Query: 24 FKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL 80
FKS E++ RL +++ RIG IP+PG + + + Y +G + L F G+
Sbjct: 11 FKSIELKNRLLFLLAALIVFRIGAHIPVPGVNTSALAEVYKDQGNGILGMLNVFSGGSLE 70
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+ S F +GI P I ASI++Q+ I+PSL L+KEG G +I Y + ++ A+ +
Sbjct: 71 RFSIFAIGIMPYISASIIVQLASEILPSLKALKKEGDLGRRQITRYTRFAAVILALFQGA 130
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ A + + S V+ ++T LV G M + W+ + I+E G G G SLII GI
Sbjct: 131 VAATFVFQQGVVVISQ-VEFYLLTLICLVTGTMFLMWLGEQITERGIGNGISLIITAGIC 189
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLA 259
G L ++ S ++ + F+L I+ ++ VV E RKV + Y
Sbjct: 190 AGIPSGLSQLWSMIVSGKLLSVLFIL----FAAILLIYIVVFFESALRKVPIHY------ 239
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 319
AR Y+PF +N +G+ P + + ++ FP+ + + LG+ + K L+ +
Sbjct: 240 --ARRQILDGGKGAYLPFKLNMAGVIPPIFASSVILFPATIVNWLGNNHSELQKFALSFQ 297
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKI 379
++ + FF + + + PKE+A+ L K GA +P ++PG T YL +
Sbjct: 298 HGTIGYIALFASAVIFFCYFYTALVFS--PKEMAENLKKGGAFVPGIRPGAQTAFYLESV 355
Query: 380 QASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
WG + ++ T I + ++ N F++G TS+LI+V ++ +Y ++
Sbjct: 356 VNRLTLWGAIYIT---TVCLIPEFFISFFNISFALGGTSLLILVVVTMDFNVQVFSYGMV 412
Query: 440 PSLSKALRR 448
+ R
Sbjct: 413 QQYENLINR 421
>gi|344923978|ref|ZP_08777439.1| preprotein translocase subunit SecY [Candidatus Odyssella
thessalonicensis L13]
Length = 448
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 214/440 (48%), Gaps = 45/440 (10%)
Query: 21 ESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
+F K+E +++R++ T + +++ R G +IPLPG + L+ Q++ + SG + + D
Sbjct: 15 STFSKAEDLKKRIYFTLLALIVYRFGTYIPLPGVNP-LVIQEFAAMNSGGIFGILDMFSG 73
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA +++ F L I P I ASI++Q++ + P L L+KEG G +K+ Y + ++ A
Sbjct: 74 GAISRMTVFALNIMPYISASIIVQLMTSVSPHLEALKKEGESGRKKLNQYTRYGTVLLAS 133
Query: 137 LEAVIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
++A +A L + S +V + T L G + + W+ + I+ G G G+
Sbjct: 134 VQAFGIAV-GLEKMVVGTSTAVLNPGFFFKFSTIVTLTGGTLFIMWLGEQITSRGLGNGT 192
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SLII GI+ ++ K ++ +L LL V +V + V + + R++ +
Sbjct: 193 SLIIYSGIVANLPQSFAKTFISARTGAISNGILVLILLMV-AVVIAYVVFMEKAQRRILI 251
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
QY ++A+ D P ++P +N SG+ P + LL FP+ +A GS
Sbjct: 252 QYPKRQVAA----DRPAQAQTTHLPLKLNSSGVIPPIFANSLLLFPATIAGFSGS----- 302
Query: 312 VKEILNPETSVG------ARPWVYYTIYA-----FFVFLFN--IFDIANLPKEIADYLNK 358
+NP++ +G A Y I + FF F + +F+ P E A+ L K
Sbjct: 303 ----MNPDSILGMIATYMAHGKPLYMICSTALIIFFAFFYTALVFN----PTETAENLRK 354
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
MG IP ++PGKAT +Y+ + G + LA+ + + L ++ F G TS
Sbjct: 355 MGTFIPGIRPGKATADYIDYVLTRLTVIGSIY---LASICLLPELILSKVALPFYFGGTS 411
Query: 419 VLIIVGSIIELRRSYQAYNV 438
+LI+V I+ Q++ V
Sbjct: 412 ILIVVSVTIDTISQMQSHLV 431
>gi|312115707|ref|YP_004013303.1| preprotein translocase subunit SecY [Rhodomicrobium vannielii ATCC
17100]
gi|311220836|gb|ADP72204.1| preprotein translocase, SecY subunit [Rhodomicrobium vannielii ATCC
17100]
Length = 440
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 197/415 (47%), Gaps = 22/415 (5%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
E+++RL T ++I R+G FIPLPG D L+ + + S + L F GA + +
Sbjct: 22 ELKQRLLFTLGALLIYRLGTFIPLPGIDTALLAKLFESAPNTVFGMLNVFSGGALSRSAI 81
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
F L I P I ASI++Q+L ++P+L L+KEG G ++I Y ++++ A ++A + A
Sbjct: 82 FLLNIMPYITASIIIQLLTSVIPTLETLKKEGESGRKQINQYTRYLTVVIATVQATLTA- 140
Query: 145 YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYT 204
L S + + T LV G M + W+ + I+ G G G+SLII GI+
Sbjct: 141 QGLNSSALEPGWFFQ--LTTVVSLVGGTMFLVWLGEQITARGIGNGASLIIFAGIVAEMP 198
Query: 205 ETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 263
LY++L Q G S P +LGL + V V RK+ +QY ++ +
Sbjct: 199 TALYRILEQ--GRSGVLSPAVILGLFVMMVAVVTVVVFFERAQRKLTIQYPKRQVGNRMF 256
Query: 264 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG--SPFWQHVKEILNPETS 321
+ ++P +N SG+ P + + LL P+ + I+G S V + P
Sbjct: 257 QGD-----SSHLPLKLNASGVIPPIFASTLLYLPATIEQIVGKSSETLNQVLTLFGPGQP 311
Query: 322 VGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQA 381
+ Y + FF F + I+ PK+ A+ L K G IP ++PG+ T EY+ +
Sbjct: 312 L--HILFYIALIVFFCFFYTPIVIS--PKDTAENLKKYGGFIPGIRPGQRTAEYIEYVMT 367
Query: 382 STRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
G +S + +L + ++ F G TS+LI+V ++ Q++
Sbjct: 368 RITLVGAAYVSAVCILPEVLSY---QMQAPFYFGGTSLLIVVSVTMDTVAQVQSH 419
>gi|77462279|ref|YP_351783.1| preprotein translocase subunit SecY [Rhodobacter sphaeroides 2.4.1]
gi|77386697|gb|ABA77882.1| protein translocase subunit secY/sec61 alpha [Rhodobacter
sphaeroides 2.4.1]
Length = 452
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 194/417 (46%), Gaps = 20/417 (4%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+++R+R+F T L+++ R+G +IP+PG D + Q S +G L F GA ++
Sbjct: 21 TDLRQRIFFTIGLLMVYRLGTYIPVPGIDGSALRQFMDSATAGIGGMLNMFTGGAISRMG 80
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q++ +VP L QL+KEG G +KI Y + ++ A +A +A
Sbjct: 81 IFALGIMPYISASIIVQLMASMVPRLEQLKKEGEQGRKKINQYTRYGTVFLATFQAWGIA 140
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
SL + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 141 M-SLEAGDLVTDPGLFFRAACVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEI 199
Query: 204 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
L + LSQ G S P ++G++ + V + V + RK+ +QY ++
Sbjct: 200 PAHLAQFLSQ--GRSGAISPAVIVGVIAMVIAVITFVVFMERALRKIHIQYPRRQVGMKV 257
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSV 322
+ ++P +NP+G+ P + + LL P +++ G + IL
Sbjct: 258 YDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGQQTGPVMSTIL---AYF 309
Query: 323 GARPWVYYTIYAFFVFLFNIFDIANLP---KEIADYLNKMGARIPNVKPGKATIEYLTKI 379
G +Y +A + F F AN+ ++A+ L IP ++PGK T EYL +
Sbjct: 310 GPGQPLYLLFFAGMIVFFAYFYTANVAFKVDDVAENLKNQNGFIPGIRPGKKTEEYLEYV 369
Query: 380 QASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
G L+ + IL + L F G TSVLI+V ++ Q++
Sbjct: 370 VNRILVLGSAYLAAVCLLPEILRNQL---GIPFYFGGTSVLIVVSVTMDTINQVQSH 423
>gi|375093443|ref|ZP_09739708.1| preprotein translocase, SecY subunit [Saccharomonospora marina
XMU15]
gi|374654176|gb|EHR49009.1| preprotein translocase, SecY subunit [Saccharomonospora marina
XMU15]
Length = 435
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 213/445 (47%), Gaps = 59/445 (13%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP------QDYLSFVSGSVDELGDFGAEL 80
++R+++ T +++ + RIG +P PG + QD F S+ L GA L
Sbjct: 13 DLRKKILFTLMIVAVYRIGATMPAPGVSYPNVQACQAQVQDQNIF---SLLNLFSGGALL 69
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+LS F GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++ AIL+A
Sbjct: 70 QLSVFATGIMPYITASIIVQLLTVVIPRFEELKKEGQAGQSKLTQYTRYLTIALAILQAT 129
Query: 141 IVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
V + ++ +SV + +T + G M W+ + I+E G G G SL
Sbjct: 130 GVVALADRGQLFGDCDQPVLPDNSVYSLALTVLTMTAGTAVMMWLGELITERGVGNGMSL 189
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
+I + I +L+ G V ++ +LGL + ++ + V +G R++ +QY
Sbjct: 190 LIFLNIAARIPAEGANILNN-QGGLVFFFVCVLGLAIIASV-----IFVEQGQRRIPVQY 243
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FW 309
+ + Y+P +N +G+ PV+ + LL P ++ ++G+P +W
Sbjct: 244 AKRMIGRRMYGGT-----STYLPIKVNQAGVIPVIFASSLLYLPDLIGRLVGNPNEASWW 298
Query: 310 QH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKMGARIPN 365
Q ++ L ++S WV+ +Y + F F I N+ E A+ + K G IP
Sbjct: 299 QRFLQTYLVDQSS-----WVHILMYFALIIFFTYFYITITFNV-DERAEEMKKFGGFIPG 352
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-----NEGFSIGFTSVL 420
++PG+ T EYL + + G + L I+A IL ++ I N+ F G T+VL
Sbjct: 353 IRPGRPTAEYLGHVLSRITLPGSIYLGIVA----ILPNFFLSITGEGQNQNFPFGGTAVL 408
Query: 421 IIVGSIIE---------LRRSYQAY 436
I+VG ++ ++R+Y+ +
Sbjct: 409 IMVGVGLDTVKQIESQLMQRNYEGF 433
>gi|453075576|ref|ZP_21978362.1| preprotein translocase subunit SecY [Rhodococcus triatomae BKS
15-14]
gi|452763002|gb|EME21289.1| preprotein translocase subunit SecY [Rhodococcus triatomae BKS
15-14]
Length = 437
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 211/436 (48%), Gaps = 50/436 (11%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ +F ++RR++ + LI + R G +P PG D + + + +SGS D+ G
Sbjct: 1 MLSAFVSAFRTPDLRRKILIALGLIALYRFGATLPSPGVDYGNV-KACIDQISGS-DQAG 58
Query: 75 DF--------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY 126
+ GA L+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y
Sbjct: 59 IYSLINLFSGGALLQLSVFAIGIMPYITASIIVQLLTVVIPRFEELRKEGQSGQAKMTQY 118
Query: 127 IWWISLGFAILEAV-IVACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWIC 179
++S+ A+L++ IVA + + A SV ++ ++ GA + W+
Sbjct: 119 TRYLSIALAVLQSTGIVALAARGQLLQGCSEPILADDSVFAMVTIVLVMTAGAALVMWMG 178
Query: 180 DTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA 239
+ I+E G G G SL+I GI + +L G + + V +V +
Sbjct: 179 ELITERGVGNGMSLLIFSGIASRLPSEGKAILDSRGG-------LIFAAVCVAALVLIAG 231
Query: 240 VV-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 298
VV V +G R++ +QY + S Y+P +N +G+ PV+ + LL P+
Sbjct: 232 VVFVEQGQRRIPVQYAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPN 286
Query: 299 ILASILGS-----PFW--QHVKE-ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL-- 348
++A + G+ P W + + E ++NP +Y IY + F F +A
Sbjct: 287 LIAQLSGASSATDPSWWQRFINEYLVNPSNP------IYILIYFLLIVFFTYFYVAITFN 340
Query: 349 PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI 408
P+E AD + K G IP ++PG+ T +YL + + G + L ++A + + +L +
Sbjct: 341 PEERADEMKKFGGFIPGIRPGRPTADYLQYVLSRITLPGAIYLGLIA---VLPNFFLAQG 397
Query: 409 NEGFSI-GFTSVLIIV 423
+ G SI G +VLI+V
Sbjct: 398 SAGSSIFGGAAVLILV 413
>gi|441516702|ref|ZP_20998448.1| preprotein translocase SecY subunit [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441456408|dbj|GAC56409.1| preprotein translocase SecY subunit [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 444
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 202/443 (45%), Gaps = 57/443 (12%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L++ +F ++R+++ ++V+ R G +P PG D R I + G ++
Sbjct: 1 MLSSLVATFRTPDLRKKIVFVLGILVLYRFGATLPSPGVDFRAINDCVDAAARGDSAQIY 60
Query: 75 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
GA L+LS F +GI P I ASI++Q+L ++P QLRKEG G K+ Y
Sbjct: 61 SLINMFSGGALLQLSVFAIGIMPYITASIIVQLLTVVIPRFEQLRKEGQSGQAKMTQYTR 120
Query: 129 WISLGFAILEAVIVACYSLPYSIYAA-------------SHSVKHVMVTAFLLVCGAMTM 175
++++ A+L++ + + S++ S + + + ++ GA +
Sbjct: 121 YLTVALALLQSTGIVALAASGSLFPTSGAEGCDPQAIVRSDGIMELSLMVLVMTAGATLV 180
Query: 176 SWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIV 235
W + I+E G G G SL+I GI +L G + GL+ + ++
Sbjct: 181 MWFGELITERGVGNGMSLLIFAGIAARLPAEGRTILQTRGG-------LVFGLVCLAVLI 233
Query: 236 TMWAVV-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLL 294
+ AVV + +G R+V +QY + S YIP +N +G+ PV+ + LL
Sbjct: 234 ILLAVVFIEQGQRRVPVQYAKRMVGRKMYGGS-----STYIPIKVNTAGVIPVIFASSLL 288
Query: 295 AFPSILASIL-------GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIAN 347
P ++ SI G W ++NP + WV+ +Y + F F +A
Sbjct: 289 YIPQLIISITQGSADVSGWQLWIQ-DNLVNPGS------WVHIAVYFLLIIFFTYFYVAV 341
Query: 348 L--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL 405
P+E AD + + G IP ++PGK T +YL+ + + G L L I+A IL +
Sbjct: 342 TFNPEERADDMKRYGGFIPGIRPGKPTADYLSFVLSRITLPGSLYLGIIA----ILPNLF 397
Query: 406 RRINEGFSI-----GFTSVLIIV 423
I S+ G T++LI+V
Sbjct: 398 LEIGNSSSVANLPFGGTALLIMV 420
>gi|363581383|ref|ZP_09314193.1| preprotein translocase subunit SecY [Flavobacteriaceae bacterium
HQM9]
Length = 446
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 207/421 (49%), Gaps = 18/421 (4%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
E+R R+ +T L+++ R G + LPG D + Q G + L F GA S
Sbjct: 14 DELRNRIGLTLGLLLVYRFGAQVVLPGIDAAQLAQLGTQTQDGLLGLLNAFTGGAFANAS 73
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA---V 140
F LGI P I ASI++Q++ +P L +L+KEG G +KI W+++G +++ +
Sbjct: 74 VFALGIMPYISASIVVQLMGIAIPYLQKLQKEGESGRKKINQITRWLTIGITLVQGPSYI 133
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+LP S + +SV + + ++ G + W+ + I+E G G G SL+I VGI+
Sbjct: 134 YNLFNTLPESAFVMGNSVAFIASSVIIITTGCIFAMWLGERITEKGIGNGISLLIMVGII 193
Query: 201 TGYTET-LYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 259
+ + ++S++ G +L L ++ ++ + ++++ R+V +Q Y + A
Sbjct: 194 ATLPQVFIQNLISRVSGEEGGGLIMVLIELVIWFVIILASILLVMAVRQVPVQ-YARRTA 252
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 319
E + I YIP +N SG+ P++ ++ P+ +A + + Q + +
Sbjct: 253 DGGYEKN-IFGSRQYIPLKLNASGVMPIIFAQAIMFVPAAVAGLSQTETAQGITAAFSNI 311
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFDIA-NLP-KEIADYLNKMGARIPNVKPGKATIEYLT 377
W Y ++ + +F F A +P ++AD L + G +P +PG T EYL
Sbjct: 312 FGF----W-YNLVFGLLIIVFTYFYTAITVPTNKMADDLKRSGGFVPGFRPGTETSEYLD 366
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQA 435
KI + F G + L+++A I L + +G+++ G TS+LI+VG I+ + +
Sbjct: 367 KIMSQITFPGSIFLALIAIFPAIAVSLL-GVQQGWALFFGGTSLLIMVGVAIDTVQQVNS 425
Query: 436 Y 436
Y
Sbjct: 426 Y 426
>gi|322390680|ref|ZP_08064194.1| preprotein translocase subunit SecY [Streptococcus parasanguinis
ATCC 903]
gi|321142653|gb|EFX38117.1| preprotein translocase subunit SecY [Streptococcus parasanguinis
ATCC 903]
Length = 436
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 214/438 (48%), Gaps = 46/438 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 73
++F ++R ++ T +I++ RIG I +PG + +++ + LS VSG+
Sbjct: 8 DAFKVKQVRSKILFTIFIILVFRIGTTITVPGVNAKILNNLQDVSFLNMLSLVSGN---- 63
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
A S F LG+SP I ASI++Q+L ++P V+ K+G G K+ +ISL
Sbjct: 64 ----AMRNFSVFALGVSPYITASIVVQLLQMDLLPKFVEWGKQGEVGRRKLNQATRYISL 119
Query: 133 GFAILEAVIVAC--YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ + ++L + A+ + K ++ +L G+M ++W+ + I++ G+G G
Sbjct: 120 VLAFVQSIGITATFHTLSQAKLVATPNTKTYLLIGAILTTGSMIVTWLGEQITDKGYGNG 179
Query: 191 SSLIICVGILTGYTETLYKMLSQLL-----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
S+II GI++ E + ++ G F+ L+ ++ + V +
Sbjct: 180 VSMIIFAGIVSSIPEMIKEIYENAFVNVRSGQMTNSLIFVGVLILAVLVIVYFTTFVEQA 239
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
K+ +QY K+A A S Y+P +NP+G+ PV+ + + A P+ + ++
Sbjct: 240 QYKIPIQYT--KIAQGAPSSS-------YLPLKVNPAGVIPVIFASSITAAPAAIFQVIS 290
Query: 306 SPFW-----QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNK 358
+ + + + +L T G +YA + LF F + P++ A+ L K
Sbjct: 291 AMGYNAGWVKTAQAMLATNTPTGV------AMYALLIILFTFFYTFVQINPEKTAENLQK 344
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
GA IP V+PGK T E+++++ G + L ++ T IL L + + ++G TS
Sbjct: 345 SGAYIPGVRPGKGTEEFMSRLLRRLASVGSVFLGLI-TIIPILARDLFGLTDAVALGGTS 403
Query: 419 VLIIVGSIIELRRSYQAY 436
+LII+ + IE + + Y
Sbjct: 404 LLIIISTGIEGMKQLEGY 421
>gi|149371649|ref|ZP_01891065.1| protein translocase subunit SecY [unidentified eubacterium SCB49]
gi|149355276|gb|EDM43836.1| protein translocase subunit SecY [unidentified eubacterium SCB49]
Length = 446
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 207/421 (49%), Gaps = 18/421 (4%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
E+R R+ +T L+++ R G + LPG D + +F G L F GA S
Sbjct: 14 EELRNRIILTLGLLLVYRFGAQVTLPGIDASKLGGFAGNFDGGLGGLLNAFTGGAFANAS 73
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA---- 139
F LGI P I ASI++Q++ VP L +L+KEG G +KI W+++G +++A
Sbjct: 74 VFALGIMPYISASIVVQLMQIAVPYLQKLQKEGESGRKKINQITRWLTIGICLVQAPSYL 133
Query: 140 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
+ + +P + + ++ + +LV G + W+ + I++ G G G S++I VGI
Sbjct: 134 LGLEALGVPAEAFILGKPLWFMITSTLILVTGTIFAMWLGEKITDKGIGNGISILIMVGI 193
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 259
+ ++ + + + S +L L ++ ++ + V++ RK+ +QY +
Sbjct: 194 IATLPQSFVQEFASRVLESNGGMIMILLELVIWFVIILACVMLVLAVRKIPVQYA--RRT 251
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 319
++ + I +IP +N SG+ P++ ++ PS +AS+ S + V+ +
Sbjct: 252 ASGEYERNIFGARQFIPLKLNASGVMPIIFAQAIMFVPSAVASMSESDWATSVQATYSDI 311
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFDIA-NLP-KEIADYLNKMGARIPNVKPGKATIEYLT 377
+ W Y +A + +F F A +P ++AD L + G IP +KPG T E L
Sbjct: 312 FGL----W-YNVTFAILIIVFTYFYTAITVPTNKMADDLKRSGGFIPGIKPGTDTAELLD 366
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIELRRSYQA 435
+I + G + L++LA I+ L I +G+++ G TS+LI+VG I+ + +
Sbjct: 367 RIMSQITLPGSIFLAVLAIFPAIVVS-LMGIQQGWALFYGGTSLLIMVGVAIDTMQQINS 425
Query: 436 Y 436
Y
Sbjct: 426 Y 426
>gi|116072182|ref|ZP_01469450.1| preprotein translocase SecY [Synechococcus sp. BL107]
gi|116065805|gb|EAU71563.1| preprotein translocase SecY [Synechococcus sp. BL107]
Length = 439
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 192/400 (48%), Gaps = 25/400 (6%)
Query: 47 FIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCH 104
+IP+PG DR Q D + G +D G L F LGI P I ASI++Q+L
Sbjct: 43 YIPMPGIDREAFKQFIDQGGQLIGFLDIFTGGGIS-TLGIFALGILPFINASIILQLLTA 101
Query: 105 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 163
+P L L+K EG G KI +++LG+ ++++V+ A Y++ S V V+
Sbjct: 102 ALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLIQSVVFAMILRQYAVEGLSEVV-FVVQ 160
Query: 164 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKML--SQLLGSSVRW 221
TA LV G+M + WI + I+E G GQG+SL+I + I+ TL + +Q
Sbjct: 161 TALALVTGSMVVMWIAEVITERGIGQGASLVIFLNIVATLPRTLGATIEAAQTGDRDTVL 220
Query: 222 WPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINP 281
+L L+ + TIV + + V EG R++ + ++ A + + Y+P +N
Sbjct: 221 GIVVLVLVFLATIVGI--IFVQEGARRIPIVSAKRQVGGAG----ALPTRQSYLPLKLNA 274
Query: 282 SGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFN 341
G+ P++ + L+ P +A++ S + +LNP S PW Y + + F+
Sbjct: 275 GGVMPIIFASALIFLPVTVANLTKSEWLIRAASMLNPSAS---NPWPYALAFFTLILGFS 331
Query: 342 IF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSST 399
F + P +IA L + G IP V+PG AT YL+ +Q LL + S
Sbjct: 332 YFYASLTVNPADIATNLKRGGVAIPGVRPGSATTNYLSGVQNRLT----LLGGLFLGSVA 387
Query: 400 ILDHYLRR---INEGFSIGFTSVLIIVGSIIELRRSYQAY 436
I+ + R + +G TS+LI+VG I+ + Q Y
Sbjct: 388 IIPAAVERATNVQTFQGLGATSLLILVGVAIDTAKQVQTY 427
>gi|268680568|ref|YP_003304999.1| preprotein translocase subunit SecY [Sulfurospirillum deleyianum
DSM 6946]
gi|268618599|gb|ACZ12964.1| preprotein translocase, SecY subunit [Sulfurospirillum deleyianum
DSM 6946]
Length = 420
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 209/424 (49%), Gaps = 33/424 (7%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-----AE 79
++ R++ VT I RI ++P+PG + +I + F S S + LG F A
Sbjct: 2 NQDLTRKILVTLGFIFAYRILAYVPVPGVNIEVIKE---FFDSNSSNALGMFNMFSGNAA 58
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+LS LGI P I ASI+M++L P+L +++KE DG K I + ++G I++A
Sbjct: 59 ERLSIISLGIMPYITASIIMELLAATFPALGKMKKE-RDGMVKYMQIIRYATIGITIVQA 117
Query: 140 VIVACYSLPYSIYAASHSVKHVMVT-----AFLLVCGAMTMSWICDTISESGFGQGSSLI 194
+ V+ + + ++ M T A ++ G M + WI + I++ G G G SLI
Sbjct: 118 IGVSVGLGGMTGRSGESAIMLDMTTFSAIAAASMLTGTMLLMWIGEQITQRGIGNGISLI 177
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY 253
I GI++G + ++ L+ + + ++G+L V + T+ +++ E G R+V + Y
Sbjct: 178 IFAGIVSGIPSAIGGTIN-LVNTGELNFLVVIGIL-VVILATVGSIIYVEMGERRVPISY 235
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
+ + + Y+P +N SG+ P + + +L FPS + +P Q +
Sbjct: 236 -----SRKVVLQNQHKRIMNYVPIKMNLSGVIPPIFASAILMFPSTIMQASTNPIVQAIH 290
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKA 371
+ LNP + +++ + FV F F I K+I++ L K G IP V+PG++
Sbjct: 291 DFLNPNS------YIFNVLTFLFVIFFAYFYASIVFNAKDISENLKKQGGFIPGVRPGES 344
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T YL ++ WG + L +++T +L ++ + F G T+VLI+V ++ R
Sbjct: 345 TALYLNEVAGRLTLWGSIYLGLISTLPWVL---VKVMGVPFYFGGTAVLIVVQVALDTMR 401
Query: 432 SYQA 435
+A
Sbjct: 402 KIEA 405
>gi|340359398|ref|ZP_08681884.1| preprotein translocase subunit SecY [Actinomyces sp. oral taxon 448
str. F0400]
gi|339884719|gb|EGQ74487.1| preprotein translocase subunit SecY [Actinomyces sp. oral taxon 448
str. F0400]
Length = 430
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 200/421 (47%), Gaps = 37/421 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI------PQDYLSFVSGSVDELG 74
++F ++R +L T ++ + R+G +P PG D + QD +G ++ +
Sbjct: 7 QAFRTPDLRSKLLFTLGIMALFRLGSILPTPGVDMANVQKCIGESQD-----AGLLNLIN 61
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
F GA L+LS F LGI P I ASI++Q+L ++P +L KEG G K+ Y ++++
Sbjct: 62 IFSGGALLQLSVFALGIMPYITASIIIQLLRVVIPHFEELYKEGQSGTAKLTEYTRYLTI 121
Query: 133 GFAILEAVIVACYSLPYSIY-------AASHSVKHVMVTAFLLVCGAMTMSWICDTISES 185
G +L++ + + ++ + S ++ V + G + W+ + I+E
Sbjct: 122 GLGVLQSATIVATAANGKLFQNCSVSVVPNDSALNMAVMVVTMTAGTGLIMWLGELITEK 181
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G G SL+I I+ + L+ ++ G S L ++ V + T+ V + +
Sbjct: 182 GIGNGMSLLIFTSIVARMPQNLFSIIGGNGGVSK-----FLAVVAVILVATIAVVFIEQA 236
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
R++ +QY K R+ T YIP IN +G+ PV+ + +L+ P ++A G
Sbjct: 237 TRRIPVQYA--KRMVGRRQYGGSTT---YIPIKINTAGVIPVIFASSILSMPQLVAQ-FG 290
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARI 363
SP V+ I + ++ VY Y + F F I P+EIAD + K G I
Sbjct: 291 SPASSWVQWI---DKNLQQTAPVYLVGYGVLILFFTFFYTAITFNPEEIADNMKKYGGFI 347
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++ G+ T YL + G L L +LA TI +L +++ G T++LI+V
Sbjct: 348 PGIRAGEPTARYLGYVINRVTVAGSLYLVVLALLPTIAVMWL-GLSQNLPFGGTTILIMV 406
Query: 424 G 424
G
Sbjct: 407 G 407
>gi|332560160|ref|ZP_08414482.1| preprotein translocase subunit SecY [Rhodobacter sphaeroides WS8N]
gi|332277872|gb|EGJ23187.1| preprotein translocase subunit SecY [Rhodobacter sphaeroides WS8N]
Length = 452
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 194/417 (46%), Gaps = 20/417 (4%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+++R+R+F T L+++ R+G +IP+PG D + Q S +G L F GA ++
Sbjct: 21 TDLRQRIFFTIGLLMVYRLGTYIPVPGIDGSALRQFMDSATAGIGGMLNMFTGGAISRMG 80
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q++ +VP L QL+KEG G +KI Y + ++ A +A +A
Sbjct: 81 IFALGIMPYISASIIVQLMASMVPRLEQLKKEGEQGRKKINQYTRYGTVFLATFQAWGIA 140
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
SL + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 141 M-SLEAGDLVTDPGMFFRAACVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEI 199
Query: 204 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
L + LSQ G S P ++G++ + V + V + RK+ +QY ++
Sbjct: 200 PAHLAQFLSQ--GRSGAISPAVIVGVIAMVIAVITFVVFMERALRKIHIQYPRRQVGMKV 257
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSV 322
+ ++P +NP+G+ P + + LL P +++ G + IL
Sbjct: 258 YDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGQQTGPVMSTIL---AYF 309
Query: 323 GARPWVYYTIYAFFVFLFNIFDIANLP---KEIADYLNKMGARIPNVKPGKATIEYLTKI 379
G +Y +A + F F AN+ ++A+ L IP ++PGK T EYL +
Sbjct: 310 GPGQPLYLLFFAGMIVFFAYFYTANVAFKVDDVAENLKNQNGFIPGIRPGKKTEEYLEYV 369
Query: 380 QASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
G L+ + IL + L F G TSVLI+V ++ Q++
Sbjct: 370 VNRILVLGSAYLAAVCLLPEILRNQL---GIPFYFGGTSVLIVVSVTMDTINQVQSH 423
>gi|221638133|ref|YP_002524395.1| preprotein translocase subunit SecY [Rhodobacter sphaeroides KD131]
gi|221158914|gb|ACL99893.1| Preprotein translocase secY subunit [Rhodobacter sphaeroides KD131]
Length = 445
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 194/417 (46%), Gaps = 20/417 (4%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+++R+R+F T L+++ R+G +IP+PG D + Q S +G L F GA ++
Sbjct: 14 TDLRQRIFFTIGLLMVYRLGTYIPVPGIDGSALRQFMDSATAGIGGMLNMFTGGAISRMG 73
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q++ +VP L QL+KEG G +KI Y + ++ A +A +A
Sbjct: 74 IFALGIMPYISASIIVQLMASMVPKLEQLKKEGEQGRKKINQYTRYGTVFLATFQAWGIA 133
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
SL + LV G M + W+ + I+ G G G SLII VGI+
Sbjct: 134 M-SLEAGDLVTDPGMFFRAACVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEI 192
Query: 204 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
L + LSQ G S P ++G++ + V + V + RK+ +QY ++
Sbjct: 193 PAHLAQFLSQ--GRSGAISPAVIVGVIAMVIAVITFVVFMERALRKIHIQYPRRQVGMKV 250
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSV 322
+ ++P +NP+G+ P + + LL P +++ G + IL
Sbjct: 251 YDGG-----SSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGQQTGPVMSTIL---AYF 302
Query: 323 GARPWVYYTIYAFFVFLFNIFDIANLP---KEIADYLNKMGARIPNVKPGKATIEYLTKI 379
G +Y +A + F F AN+ ++A+ L IP ++PGK T EYL +
Sbjct: 303 GPGQPLYLLFFAGMIVFFAYFYTANVAFKVDDVAENLKNQNGFIPGIRPGKKTEEYLEYV 362
Query: 380 QASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
G L+ + IL + L F G TSVLI+V ++ Q++
Sbjct: 363 VNRILVLGSAYLAAVCLLPEILRNQL---GIPFYFGGTSVLIVVSVTMDTINQVQSH 416
>gi|403253585|ref|ZP_10919886.1| preprotein translocase subunit SecY [Thermotoga sp. EMP]
gi|402811119|gb|EJX25607.1| preprotein translocase subunit SecY [Thermotoga sp. EMP]
Length = 431
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 213/432 (49%), Gaps = 36/432 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDE 72
+F E+R R+ T + +++ R+G +IP+PG + RR+ ++ + D
Sbjct: 7 NAFKIPELRDRIIFTLLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDV 66
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
GA + S F + ++P I ASI++Q+L ++PSL ++ +EG +G +K Y ++L
Sbjct: 67 FTG-GALSQFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAKYTRHLTL 125
Query: 133 GFAILEAVIVA---CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+A V+ S P I + ++ + + ++ G M + W+ + I+E G G
Sbjct: 126 LIGGFQAFFVSFSLARSNPDMIAPGVNVLQFTIFSTISMLAGTMFLLWLGERITEKGIGN 185
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFML--GLLGVFTIVTMWAVVVTEGCR 247
G S++I GI+ Y Y + L G ++ W F++ GL+ +F I ++V + R
Sbjct: 186 GISILIFAGIVARYPS--YIRQAYLGGLNLLEWIFLIAVGLITIFGI-----ILVQQAER 238
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
++ +QY A Y+P +N G+ P++ + +++ PS +ASI S
Sbjct: 239 RITIQY-----ARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNSG 293
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVK 367
Q++ + + V++ Y + V +F+ PKEI++ + K G IP ++
Sbjct: 294 TLQNLFKAGGFLYLLVYGLLVFFFTYFYSVVIFD-------PKEISENIQKYGGYIPGLR 346
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PG++T +YL ++ F G + L ++A ++ + R+N IG TS LI VG +
Sbjct: 347 PGRSTEQYLHRVLNRVTFIGAVFLVVIALLPYLVQGAI-RVN--VWIGGTSALIAVGVAL 403
Query: 428 ELRRSYQAYNVM 439
++ + + + VM
Sbjct: 404 DIIQQMETHMVM 415
>gi|146297266|ref|YP_001181037.1| preprotein translocase subunit SecY [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410842|gb|ABP67846.1| preprotein translocase, SecY subunit [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 435
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 212/445 (47%), Gaps = 62/445 (13%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
++RR++ T +++I R+G FIP+P DR D L+ V + LG F G
Sbjct: 13 DLRRKILFTLFMLLIFRLGAFIPVPYIDR-----DALAKVINDLTMLGFFDVVAGGTFKN 67
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F + ++P I +SI+MQ+L +P+L +L K+G +G +K+ + + + A L+AV
Sbjct: 68 MSIFAMSVTPYINSSIIMQLLTIAIPALEELAKQGEEGRKKLAEWTRYGTAILAFLQAVG 127
Query: 142 V---------ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
+ +P + + +T L G + + WI + I+E+G G G S
Sbjct: 128 IYFGLKNAQGLTGGVPVITTQGQGFLGFITIT-LALTAGTVFLMWIGEQITENGIGNGIS 186
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGL--------LGVFTIVTM------W 238
L+I GI+ S++ +V W ++ L +GV + M +
Sbjct: 187 LLIFAGII-----------SRIPNGAVSLWNYVAKLNEFSLTSIIGVLLFLVMALAIIVF 235
Query: 239 AVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS 298
+V+ EG R++ +QY A +IP +N +G+ P++ L+ P+
Sbjct: 236 IIVIQEGERRIPVQY-----AKRIVGRRVYGGQSTHIPIKVNIAGVIPIIFAISLVMLPT 290
Query: 299 ILASIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADY 355
+A S F++ VK + + W Y YA F+ F F A + P EIA+
Sbjct: 291 TIAQFFPNSGFYKFVKAYFSSGSF-----W-YTFFYALFIIGFTYFYTAIVFNPVEIANN 344
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSI 414
L G IP ++PGK T++++T++ + F G L L+ +A T++ R ++N F
Sbjct: 345 LKNNGGFIPGIRPGKPTVDFITRVLSKVTFAGALFLAFIAILPTLVGLMFRHQLNIYF-- 402
Query: 415 GFTSVLIIVGSIIELRRSYQAYNVM 439
G TS+LI+VG +E R +A +M
Sbjct: 403 GGTSLLIVVGVALETIRQMEAQMLM 427
>gi|397905085|ref|ZP_10505957.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Caloramator
australicus RC3]
gi|397161880|emb|CCJ33291.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Caloramator
australicus RC3]
Length = 389
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 187/397 (47%), Gaps = 31/397 (7%)
Query: 50 LPGFD----RRLIPQD----YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQV 101
+PG + ++L+ Q +L +SG GA + S F +GI P I +SI+ +
Sbjct: 1 MPGINLDQLKQLVDQGLLFGFLDIISG--------GAFKEFSIFAMGIVPYINSSIIFSL 52
Query: 102 LCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHV 161
L +P L +L K+G +G +KI Y + ++ FA++++ +A Y L + +S +
Sbjct: 53 LVIAIPRLEELSKQGEEGRKKIAEYTRYGTVVFALIQSFSIALY-LRNNGALLDNSWGQI 111
Query: 162 MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRW 221
++ L G + W+ + I+E G G GSS+II GIL Y + + G + +
Sbjct: 112 LLIMITLTAGTTFVMWLGEKITEYGIGNGSSMIIFAGILARIPTMGYSIGVAIKGGTANY 171
Query: 222 WPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNIN 280
+L L F ++ + VV + G R++ +QY K+ +IP N+N
Sbjct: 172 IEVILFL--AFAVLVIAGVVAMDLGERRIPVQYAQRKVGMRTYGGQ-----STHIPINLN 224
Query: 281 PSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLF 340
+G+ ++ +L FP I+ + P H L + + WVY +Y F + F
Sbjct: 225 SAGVIAIIFAISVLQFPQIITQLTLEP--THPVYALFNSGFLSPKGWVYPIVYIFLIIFF 282
Query: 341 NIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSS 398
F + P E+A L K G IP ++PGK T EYLT+I GG S++A
Sbjct: 283 TWFYTSVTFKPDEVAQNLQKSGGFIPGLRPGKPTEEYLTRIINRMTVIGGFFASLVAVLP 342
Query: 399 TILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
+L H N F G T++LI+VG +EL + A
Sbjct: 343 IVLQHVTHLGNIQF--GGTALLIVVGVALELNKQLTA 377
>gi|269104032|ref|ZP_06156729.1| preprotein translocase SecY subunit [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163930|gb|EEZ42426.1| preprotein translocase SecY subunit [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 441
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 204/431 (47%), Gaps = 22/431 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
+E++ RLF I+I R G F+P+PG D ++ D G++ EL + GA +
Sbjct: 17 AELKSRLFFVLGAILIFRAGSFVPIPGIDAAVLA-DLFEQQKGTIIELFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A +A+ +
Sbjct: 76 SILALGIMPYISASIIVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A LP I + + V LV G M + W+ + I+E G G G SLII GI+
Sbjct: 136 AT-GLPSMIPGLVVNPGLGFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLA 259
G + + + Q + +L L+ V + ++ VV E G R++ + Y A
Sbjct: 195 AGLPPAIGQTVEQARQGELHVL--LLLLIAVISFAVIYFVVFMERGQRRIVVNY-----A 247
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 319
+ ++P IN +G+ P + + ++ FP LA G +++ + +
Sbjct: 248 KRQQGRRVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQS--ENLGWLSDIS 305
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLT 377
++ +Y +YA + F F A + P+E AD L K GA +P ++PG+ T +Y+
Sbjct: 306 LALSPGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYID 365
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYN 437
K+ G L ++ + I + + N F G TS+LI+V I++ Q +
Sbjct: 366 KVMTRLTLAGALYITFIC---LIPEFMMIAWNVRFYFGGTSLLIVVVVIMDFMAQVQTHL 422
Query: 438 VMPSLSKALRR 448
+ L++
Sbjct: 423 MSQQYESVLKK 433
>gi|355575121|ref|ZP_09044688.1| preprotein translocase, SecY subunit [Olsenella sp. oral taxon 809
str. F0356]
gi|354817765|gb|EHF02260.1| preprotein translocase, SecY subunit [Olsenella sp. oral taxon 809
str. F0356]
Length = 426
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 209/437 (47%), Gaps = 31/437 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPG--FDRRLIPQDYLSFVSGSVDE 72
+LN A +F E+R+++ VTA ++++ R G ++P PG F L + SG++
Sbjct: 1 MLNGIANAFRIPELRKKILVTAGILLLYRFGAYLPAPGVPFASMLAAFQAAASSSGAIAV 60
Query: 73 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
L F GA ++S F LGI P I A I++Q+ ++PSL +L KEG G KI Y ++
Sbjct: 61 LNLFSGGALSRVSVFSLGIMPYITAQIILQMFQAVIPSLGELAKEGESGQRKITQYTRYL 120
Query: 131 SLGFAILEAV----IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
++ A++ AV + Y + +S ++++++ LL GA+ + W+ + I++ G
Sbjct: 121 TIVLALINAVGYLFLFKSYGIDFSAMGFPEMIENLIIVGVLL-TGAIIIMWLGEVITQRG 179
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G SLII I+ G +L +S S+ ++ LL V + V + G
Sbjct: 180 IGNGMSLIIFANIMAGLPHSLTASVST---STTGIIATVVTLL-VIIAIIPVIVYIERGQ 235
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R++ +QY A + Y+P +N +G+ P++ + LL P+ LA +
Sbjct: 236 RRIPVQY-----AKRVVGRRVMGGQATYLPIKVNTAGVVPIIFASALLYLPAQLAVFFPN 290
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q +L S G WV + F F + N P E AD L K G IP
Sbjct: 291 VRWIQGFANML----SSGVVNWVLSVVLIVFFAYFYTAMVFN-PDETADQLRKAGGFIPG 345
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVG 424
V+PG AT Y+ + G L ++ LA +IL + + F G TSVLI+VG
Sbjct: 346 VRPGSATAAYIKSVLDHITLPGALFMAALAVVPSILFAVTGNTLMQAF--GGTSVLIMVG 403
Query: 425 ----SIIELRRSYQAYN 437
+I +L + +N
Sbjct: 404 VAMDTISQLESQLKMHN 420
>gi|297717866|gb|ADI50076.1| preprotein translocase SecY subunit [Candidatus Odyssella
thessalonicensis L13]
Length = 435
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 214/440 (48%), Gaps = 45/440 (10%)
Query: 21 ESFFKSE-IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
+F K+E +++R++ T + +++ R G +IPLPG + L+ Q++ + SG + + D
Sbjct: 15 STFSKAEDLKKRIYFTLLALIVYRFGTYIPLPGVNP-LVIQEFAAMNSGGIFGILDMFSG 73
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA +++ F L I P I ASI++Q++ + P L L+KEG G +K+ Y + ++ A
Sbjct: 74 GAISRMTVFALNIMPYISASIIVQLMTSVSPHLEALKKEGESGRKKLNQYTRYGTVLLAS 133
Query: 137 LEAVIVACYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
++A +A L + S +V + T L G + + W+ + I+ G G G+
Sbjct: 134 VQAFGIAV-GLEKMVVGTSTAVLNPGFFFKFSTIVTLTGGTLFIMWLGEQITSRGLGNGT 192
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SLII GI+ ++ K ++ +L LL V +V + V + + R++ +
Sbjct: 193 SLIIYSGIVANLPQSFAKTFISARTGAISNGILVLILLMV-AVVIAYVVFMEKAQRRILI 251
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
QY ++A+ D P ++P +N SG+ P + LL FP+ +A GS
Sbjct: 252 QYPKRQVAA----DRPAQAQTTHLPLKLNSSGVIPPIFANSLLLFPATIAGFSGS----- 302
Query: 312 VKEILNPETSVG------ARPWVYYTIYA-----FFVFLFN--IFDIANLPKEIADYLNK 358
+NP++ +G A Y I + FF F + +F+ P E A+ L K
Sbjct: 303 ----MNPDSILGMIATYMAHGKPLYMICSTALIIFFAFFYTALVFN----PTETAENLRK 354
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
MG IP ++PGKAT +Y+ + G + LA+ + + L ++ F G TS
Sbjct: 355 MGTFIPGIRPGKATADYIDYVLTRLTVIGSIY---LASICLLPELILSKVALPFYFGGTS 411
Query: 419 VLIIVGSIIELRRSYQAYNV 438
+LI+V I+ Q++ V
Sbjct: 412 ILIVVSVTIDTISQMQSHLV 431
>gi|256831847|ref|YP_003160574.1| preprotein translocase subunit SecY [Jonesia denitrificans DSM
20603]
gi|256685378|gb|ACV08271.1| preprotein translocase, SecY subunit [Jonesia denitrificans DSM
20603]
Length = 429
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 199/426 (46%), Gaps = 28/426 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L +F ++R +L T +IV+ RIG F+P PG I Q + +G++ L
Sbjct: 1 MLGGFVRAFRTPDLRYKLLFTIGIIVLYRIGSFVPAPGVSYPNIQQCLATQETGALLGLV 60
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
+ GA L+LS F LGI P I ASI++Q+L ++P L KEG G K+ Y +++
Sbjct: 61 NLFSGGALLQLSIFALGIMPYITASIIVQLLRVVIPRFEALHKEGQTGTAKLTQYTRYLT 120
Query: 132 LGFAILEAVIVACYS-----LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
+G A+L+A + +P + ++SV + + GA + W + I++ G
Sbjct: 121 IGLALLQATTYVTLARTGNLIPGCVVIPNNSVMTSLFVVLTMTAGATLLMWFGEQITDRG 180
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G S++I + I + ++ ++Q G ++ +L V IV V V +
Sbjct: 181 IGNGMSMLIFISIAASFPPAIWS-ITQGSGGFAKFAI----VLAVALIVIALVVFVEQSQ 235
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R++ +QY + S YIP IN +G+ PV+ + +LA P+++A
Sbjct: 236 RRIPVQYAKRMVGRKVYGGS-----STYIPIKINMAGVIPVIFASSILAVPTLVAQFADV 290
Query: 307 P----FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGAR 362
W + I +P + ++ + FF F + I P E+AD + K G
Sbjct: 291 NNDWVAWIQ-RNIASPSAPL--HLALFVVMILFFCFFYT--AITFNPDEVADNMKKYGGF 345
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++ G+ T EYL + G + L+++A T+ + + G TS+LII
Sbjct: 346 IPGIRAGRPTAEYLDYVITRVTSAGAIYLALVALVPTV-TFIAMGVGDSIPFGGTSILII 404
Query: 423 VGSIIE 428
VG +E
Sbjct: 405 VGVGLE 410
>gi|332523334|ref|ZP_08399586.1| preprotein translocase, SecY subunit [Streptococcus porcinus str.
Jelinkova 176]
gi|332314598|gb|EGJ27583.1| preprotein translocase, SecY subunit [Streptococcus porcinus str.
Jelinkova 176]
Length = 434
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 218/436 (50%), Gaps = 57/436 (13%)
Query: 28 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 80
+R+++ T +I+I RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 15 VRQKILYTIFIILIFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGN--------AMR 66
Query: 81 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISLG A +++
Sbjct: 67 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLGLAFIQS 126
Query: 140 V-IVACY-SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ I A + SL ++ +VK ++ LL G++ ++W+ + I+ GFG G S+II
Sbjct: 127 IGITAGFNSLSNVALVSTPNVKTYLLIGALLTTGSVIVTWLGEQITAKGFGNGVSMIIFA 186
Query: 198 GILTGYTE---TLYK-MLSQLLGSSVRWWPFMLGLLGVFTI--VTMWAVVVTEGCRKVKL 251
GI++ T+Y+ + ++ ++G+L +F + + + V + K+ +
Sbjct: 187 GIISSIPNAIATVYEDYFVNVKAGDIQSSYLIVGVL-IFAVLAIVFFTTFVQQAEYKIPI 245
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
QY KL A S Y+P +NP+G+ PV+ + + PS L PF+Q+
Sbjct: 246 QYT--KLVQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTLI-----PFFQN 291
Query: 312 ---------VKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMG 360
+++ILN ++ G +YAF + LF+ F + P++ A+ L K
Sbjct: 292 GRDIPWLTKLQDILNYQSPTGM------IVYAFLIILFSFFYTFVQVNPEKTAENLQKNS 345
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
+ IP+V+PG+ T Y++ + G + L+ ++ L ++ G ++G TS+L
Sbjct: 346 SYIPSVRPGRETELYMSSLLKKLATLGSIFLAFISLVPIAAQQTL-NLSSGIALGGTSLL 404
Query: 421 IIVGSIIELRRSYQAY 436
I++ + IE + + Y
Sbjct: 405 ILISTGIEGMKQLEGY 420
>gi|331699156|ref|YP_004335395.1| preprotein translocase subunit SecY [Pseudonocardia dioxanivorans
CB1190]
gi|326953845|gb|AEA27542.1| preprotein translocase, SecY subunit [Pseudonocardia dioxanivorans
CB1190]
Length = 438
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 206/445 (46%), Gaps = 56/445 (12%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSG--SVDELGDFGAEL 80
++R+++ T ++ + R+G IP PG ++ I Q SG S+ L GA L
Sbjct: 13 DLRKKILFTLGIVAVYRLGANIPSPGVSFPNVQQCIQQVEGGENSGVYSLINLFSGGALL 72
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+LS LGI P I ASI++Q+L ++P QL+KEG G K+ Y ++++ A+L+A
Sbjct: 73 QLSILALGIMPYITASIIVQLLTVVIPRFEQLKKEGQSGQNKLTQYTRYLTIALAVLQAT 132
Query: 141 IVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
+ ++ ++ SV + V ++ G + W+ + ++E G G G SL
Sbjct: 133 GIVALAVRGVLFQGCSLPVIPDTSVFALAVMVIVMTAGTAVVMWLGEQVTERGIGNGMSL 192
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQ 252
+I I +L G + + VF + + +VV V +G R++ +Q
Sbjct: 193 LIFASIAHRIPAEGKNILDNSGG-------LVFAGVCVFGLAIIASVVFVEQGQRRIPVQ 245
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----- 307
Y A Y+P +N +G+ PV+ + LL PS++A + G
Sbjct: 246 Y-----AKRMVGRRMYGGTSTYLPLKVNQAGVIPVIFGSSLLYLPSLIAQLAGGSDGSGW 300
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPN 365
F Q V+ L +++ W++ +Y + F F I P E AD + K G IP
Sbjct: 301 FQQFVQTYLVDQSN-----WLHIVLYVALIIFFTYFYVGITFNPDERADEMKKFGGFIPG 355
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-----NEGFSIGFTSVL 420
++PG+ T EYL + + G L L I+A +L ++ I N+ F G T+VL
Sbjct: 356 IRPGRPTAEYLNFVLSRITLPGSLYLGIIA----VLPNFFLGITGSGQNQNFPFGGTAVL 411
Query: 421 IIVGSIIE---------LRRSYQAY 436
I+VG ++ ++R+Y+ +
Sbjct: 412 IMVGVGLDTVKQIESQLMQRNYEGF 436
>gi|222152285|ref|YP_002561460.1| preprotein translocase subunit SecY [Streptococcus uberis 0140J]
gi|222113096|emb|CAR40475.1| preprotein translocase SecY subunit [Streptococcus uberis 0140J]
Length = 434
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 215/431 (49%), Gaps = 47/431 (10%)
Query: 28 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 80
+R ++ T +I++ RIG I +PG + + + Q + L+ VSG+ A
Sbjct: 15 VRHKILYTIFIILVFRIGTHITVPGVNAKSLEQLSDLPFLNMLNLVSGN--------AMR 66
Query: 81 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A +++
Sbjct: 67 NFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFVQS 126
Query: 140 V-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ I A ++ S+ ++ +VK ++ LL G++ ++W+ + I++ GFG G S+II
Sbjct: 127 IGITAGFNTLSSVALVSTPNVKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGVSMIIFA 186
Query: 198 GILTGYTETLYKM----LSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRKVKL 251
GI++ + + + V+ ++G +L V IV + V + K+ +
Sbjct: 187 GIISSIPNAIATVHEDYFVNVKSGDVQSSYLVVGILILAVLAIV-FFTTFVQQAEYKIPI 245
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----P 307
QY KL A S Y+P +NP+G+ PV+ + + PS L + P
Sbjct: 246 QYT--KLVQGAPTSS-------YLPLKVNPAGVIPVIFASSITTIPSTLIPFFQNGRDIP 296
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGARIPN 365
+ ++E+LN +T G +YAF + LF+ F + P++ A+ L K + IP+
Sbjct: 297 WLTKLQELLNYQTPTG------MIVYAFLIILFSFFYTFVQVNPEKTAENLQKNSSYIPS 350
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
V+PG+ T +Y++ + G + L+ ++ + L ++ G ++G TS+LI++ +
Sbjct: 351 VRPGRETEQYMSSLLKKLATVGSIFLAFISLAPIAAQQTL-NLSSGIALGGTSLLILIST 409
Query: 426 IIELRRSYQAY 436
IE + + Y
Sbjct: 410 GIEGMKQLEGY 420
>gi|237786349|ref|YP_002907054.1| preprotein translocase subunit SecY [Corynebacterium kroppenstedtii
DSM 44385]
gi|237759261|gb|ACR18511.1| preprotein translocase SecY subunit [Corynebacterium kroppenstedtii
DSM 44385]
Length = 442
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 195/404 (48%), Gaps = 44/404 (10%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD-----RRL--IPQDYLSFVSGSVDELGD 75
F ++R+++ T +I++ RIG IP PG D RL + QD S S + L
Sbjct: 8 FRDPDLRKKILFTITMIILYRIGSQIPTPGVDYSSISDRLHDLNQDQSSVYS--MINLFS 65
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y ++++G A
Sbjct: 66 GGALLQLSIFAIGIMPYITASIIVQLLTVVIPKFEQLKKEGQSGQAKMTEYTRYLTVGLA 125
Query: 136 ILE-AVIVACYS----LPYSIYAASHSVKHVMVTAFLLV--CGAMTMSWICDTISESGFG 188
+L+ A IVA L + +V VT +LV GA+ + W+ + I++ G G
Sbjct: 126 LLQSAGIVALADRQQLLGEGVQVLDSNVGTFGVTMMVLVMTAGAVLVMWLGELITDKGIG 185
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
G SL+I GI T +L GS + ++ + + I ++ + +G R+
Sbjct: 186 NGMSLLIFAGIATRLPADGAAILR---GSGGLAFALVVVGVLILVIGVIF---IEQGQRR 239
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP- 307
+ +QY K R+ E Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 240 IPVQYA--KRMVGRRQ---YGETSTYLPLKVNQAGVIPVIFASSLIYVPVLITQIVNSSQ 294
Query: 308 ------FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLN 357
+WQ ++ + NP + W Y +Y + F+ F I P E AD +
Sbjct: 295 TNVKNNWWQRDVIQYLQNPAS------WQYIILYFALIIFFSFFYVSIQYDPYEQADNMK 348
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTIL 401
K G IP V+PG+ T EYL + F G L L ++A IL
Sbjct: 349 KYGGFIPGVRPGRPTAEYLGYVMNRLLFVGSLYLGVIAVLPNIL 392
>gi|448823023|ref|YP_007416188.1| preprotein translocase SecY subunit [Corynebacterium urealyticum
DSM 7111]
gi|448276520|gb|AGE35944.1| preprotein translocase SecY subunit [Corynebacterium urealyticum
DSM 7111]
Length = 471
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 202/431 (46%), Gaps = 46/431 (10%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS----VDELGDFG 77
+F ++R+++ T +I++ RIG IP PG D I + S + L G
Sbjct: 34 AFKNVDLRKKILFTLAMIILYRIGSQIPTPGVDYANITKQISELTESSAVYSLINLFSGG 93
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
A L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y ++++ A+L
Sbjct: 94 ALLQLSIFAIGIMPYITASIIVQLLTVVIPKFEQLKKEGQTGQAKMTEYTRYLTVALALL 153
Query: 138 E-AVIVACYSLPYSIYAASHSVKH------VMVTAFLLVCGAMTMSWICDTISESGFGQG 190
+ A IVA + +K ++V ++ GA+ + W+ + I++ G G G
Sbjct: 154 QSAGIVALADREQLLGQGIPVLKDEVGIFGLIVMVLIMTSGAVLVMWLGELITDRGVGNG 213
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SL+I GI T +LS G + + GLL ++ + V V +G R++
Sbjct: 214 MSLLIMAGIATTLPGEGVSILSNSGG--FIFGAVVFGLL----LLIVGVVFVEQGQRRIP 267
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---- 306
+QY K R+ E Y+P +N +G+ PV+ + LL P ++ I+ S
Sbjct: 268 VQYA--KRMIGRRQYG---ETSTYLPLKVNQAGVIPVIFASSLLTVPILITQIIQSGAAA 322
Query: 307 ------PFW-QHVKEIL-NPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYL 356
+W ++V +L NP W Y +Y + F+ F + P + AD +
Sbjct: 323 GEDVANNWWNRNVMTVLQNPAA------WQYILVYLALIIFFSFFYVSVQYDPYDQADNM 376
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINE----GF 412
K G IP ++PG+ T EYL + G L L I+A IL + ++ G
Sbjct: 377 KKYGGFIPGIRPGRPTAEYLGYVMNRLLVVGSLYLGIIAVLPNILINLGVDTSQASGGGM 436
Query: 413 SIGFTSVLIIV 423
G T+VLI+V
Sbjct: 437 PFGGTAVLILV 447
>gi|344996406|ref|YP_004798749.1| preprotein translocase subunit SecY [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964625|gb|AEM73772.1| preprotein translocase, SecY subunit [Caldicellulosiruptor
lactoaceticus 6A]
Length = 435
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 212/443 (47%), Gaps = 58/443 (13%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
++RR++ T +I++ R+G FIP+P DR D L+ V + LG F G
Sbjct: 13 DLRRKILFTLFMILVFRLGAFIPVPYIDR-----DALAKVINDLTMLGFFDVVAGGTFKN 67
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV- 140
+S F + ++P I +SI+MQ+L +P+L +L K+G +G +K+ W G AIL +
Sbjct: 68 MSIFAMSVTPYINSSIIMQLLTIAIPALEELAKQGEEGRKKLAE---WTRYGTAILAFIQ 124
Query: 141 IVACY-----------SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
V Y +P I A + L G + + WI + I+E+G G
Sbjct: 125 AVGIYFGLKNATGLTGGVPV-ITAQGQGFLGFITITITLTAGTVFLMWIGEQITENGIGN 183
Query: 190 GSSLIICVGILTGYTE---TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTM------WAV 240
G SL+I GI++ +L+ +++L S + ++GV + M + +
Sbjct: 184 GISLLIFAGIISSIPNGVVSLWDYVAKLNEFS------LTSIIGVILFIVMALAIIVFII 237
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V+ EG R++ +QY A +IP +N +G+ P++ L+ P+ +
Sbjct: 238 VIQEGERRIPVQY-----AKRVVGRRVYGGQSTHIPIKVNIAGVIPIIFAISLMMLPTTI 292
Query: 301 ASIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLN 357
A S F++ VK + + W Y YA F+ F F A + P EIA+ L
Sbjct: 293 AQFFPNSGFYKFVKAYFSSGSF-----W-YTFFYALFIIGFTYFYTAIVFNPVEIANNLK 346
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILD-HYLRRINEGFSIGF 416
G IP ++PGK T++++T++ + F G L L+ +A T++ + ++N F G
Sbjct: 347 NNGGFIPGIRPGKPTVDFITRVLSKVTFAGALFLAFIAILPTLVGIMFKHQLNIYF--GG 404
Query: 417 TSVLIIVGSIIELRRSYQAYNVM 439
TS+LI+VG +E R +A +M
Sbjct: 405 TSLLIVVGVALETIRQMEAQMLM 427
>gi|399155796|ref|ZP_10755863.1| preprotein translocase subunit SecY [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 442
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 207/433 (47%), Gaps = 31/433 (7%)
Query: 18 NAAESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF 76
N ++ F+ E+R+R+F T ++ I R+G IP PG D + + GS+ D
Sbjct: 3 NIIQNIFRIEELRQRIFFTLAMLFIFRLGAHIPTPGIDGAAL-TAFFEAQQGSILRFFDM 61
Query: 77 ---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL- 132
GA +L+ F LG+ P I ASI++Q+L + P L +L KEG G +KI SY + ++
Sbjct: 62 FTGGALARLTVFALGVMPYISASIIIQLLTAVFPYLERLSKEGDAGRKKITSYTRYGTIV 121
Query: 133 -----GFAI---LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
GFAI LE+ + A P I S + T L G + W+ + ISE
Sbjct: 122 LSVVQGFAIAVGLES-MAAPNGQPIVISTLSPWAFRAL-TVITLTAGTAFLMWVGEQISE 179
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G G SL+I GI+ G + + +L+ +V P +L ++G+ IV ++ V+ E
Sbjct: 180 RGIGNGISLLIFAGIVVGIPGAIINSV-RLVQDNV-LSPLVLAVVGILMIVVVFLVIFAE 237
Query: 245 GC-RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 303
RK+ +QY A + + ++P IN +G+ P + + +LAFP+ +
Sbjct: 238 TAYRKIPVQY-----AKRMQGNRMYGGQSSHLPLKINTAGVIPPIFASSILAFPATITGF 292
Query: 304 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 363
+ P+ Q V L P G + + F F F I P +IA+ + K G I
Sbjct: 293 IAVPWVQAVGSQLLP----GRMLYNFLFAIMIFFFAFFYTAITFNPVKIAEEMKKHGGYI 348
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P ++PGK T EY+ + F G L+++ IL + F G T++LI+V
Sbjct: 349 PGIRPGKKTAEYVNLVLTRLTFGGAAYLAVVCLFPYILFDLF---DIPFYFGGTALLIVV 405
Query: 424 GSIIELRRSYQAY 436
G ++L +A+
Sbjct: 406 GVGLDLVNQIEAF 418
>gi|119502944|ref|ZP_01625029.1| protein translocase subunit SecY [marine gamma proteobacterium
HTCC2080]
gi|119461290|gb|EAW42380.1| protein translocase subunit SecY [marine gamma proteobacterium
HTCC2080]
Length = 434
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 202/430 (46%), Gaps = 30/430 (6%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS---GSVDE 72
+NNA E+ RL V ++I RIG IP+PG D P+ + G++
Sbjct: 1 MNNAG----MGELFARLRFVLVALIIYRIGTHIPVPGID----PEQLAALFDQNQGTILG 52
Query: 73 LGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
L + GA ++S LGI P I ASI+M ++ + P L Q++KEG G KI Y +
Sbjct: 53 LANVFSGGALERMSILALGILPYISASIIMNLMSAVSPQLEQIKKEGEAGRRKISQYTRY 112
Query: 130 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+++ A+++A + L A SV ++ LV GA+ M W+ + I+E G G
Sbjct: 113 LTVALALVQATGMTV-GLANQGLAFDTSVSFYVIAITSLVTGAVFMMWLGEQITERGIGN 171
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
G SL+I GI G + + L Q + +L ++ + IV V + G R+V
Sbjct: 172 GISLLIFAGIAAGLPSAVGQSLEQARQGELNIL-VLLAIVALAVIVIYLVVFIERGQRRV 230
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 309
+ Y A + ++P +N SG+ P + + +L FP+ LA GS
Sbjct: 231 TVNY-----AKRQQGRQSYQAQSSHLPLKVNMSGVIPAIFASSILLFPASLAQWFGS--G 283
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVK 367
+ + ++G + ++ F+ F F A + PK++AD L + GA +P ++
Sbjct: 284 DSSDWLQDFAVAIGPGQPLNIMLFTGFIIFFCFFYTALMYNPKDVADNLKRSGAFVPGIR 343
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSI 426
PG+ T YL + +G ++++ +L +L + N F +G TS+LI+V +
Sbjct: 344 PGQQTANYLDGVLTRLTVFGSAYIALVC----LLPQFLVVMFNVPFYLGGTSMLIVVVVV 399
Query: 427 IELRRSYQAY 436
++ Q++
Sbjct: 400 MDFMAQVQSH 409
>gi|255584934|ref|XP_002533181.1| protein translocase secy subunit, putative [Ricinus communis]
gi|223527015|gb|EEF29204.1| protein translocase secy subunit, putative [Ricinus communis]
Length = 557
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 197/428 (46%), Gaps = 42/428 (9%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL----IPQDYL-----SFVSGSVDE 72
FFK + + + +SR+G +IPL G +R + Q+ L SF G +
Sbjct: 137 DFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGR 196
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 131
LG LGI P I A I+ Q+L + P L L+K EG G +KI Y + S
Sbjct: 197 LG---------ICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYAS 247
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+GFAI++A+ Y PY S + V+ + LL G++ +++ + S+ G G+
Sbjct: 248 VGFAIVQAIGQVLYLRPY---VNDFSTQWVLSSVTLLTLGSVFTTYLGERTSDLKLGNGT 304
Query: 192 SLIICVGILTGYTETLYKMLSQLL--GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
SL+I I++ + + ++Q G+ V ++ F ++ + V V E RK+
Sbjct: 305 SLLIFTSIISYLPASFGRTVAQAFQDGNYVGLATIIIS----FFLLVLGIVYVQEAERKI 360
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 309
L Y AS + + Y+PF +N SG+ P++ +T LA P LA G
Sbjct: 361 PLNY-----ASRYTSRTGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGISAL 415
Query: 310 QHVKEILNPETSVGARPWVYYTIY--AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVK 367
+ LNP G ++ I AFF + + + P ++++ L + GA IP V+
Sbjct: 416 KKAAVALNP----GGAFYLPTNILLIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPQVR 469
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PGK+T +L + + G L+ILA +++ + + TSVLI+VG
Sbjct: 470 PGKSTAAFLKTVLSRISVLGSGFLAILAAGPAVVEQ-ITHLTAFRGFAGTSVLILVGCAT 528
Query: 428 ELRRSYQA 435
+ R QA
Sbjct: 529 DTARKVQA 536
>gi|374587569|ref|ZP_09660661.1| protein translocase subunit secY/sec61 alpha [Leptonema illini DSM
21528]
gi|373876430|gb|EHQ08424.1| protein translocase subunit secY/sec61 alpha [Leptonema illini DSM
21528]
Length = 457
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 210/451 (46%), Gaps = 60/451 (13%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI----PQ-----DYLSFVSGSVDELGDFG 77
E+R++L T ++++ R+G FI +PG + + PQ D + SG G
Sbjct: 12 ELRKKLLFTVAVLLLFRLGSFITIPGVNPIAVAEAKPQGQSILDVVDVFSG--------G 63
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
A KLS F LGI P I +SI+M +L I+P + +L++EG G KI Y ++ +
Sbjct: 64 ALFKLSIFSLGIMPYISSSIIMSLLTVIIPQMARLQREGEAGRRKINQYTRMGTVVLCAV 123
Query: 138 EAVIVACYSLPYSIYAASHSVKHVMVTAFL-------LVCGAMTMSWICDTISESGFGQG 190
+A+ + +++ + V M A + G + + W+ + I+E G G G
Sbjct: 124 QAMFILIWAVEQTSRTGKPLVSAEMSRALFYSTGVVTITTGTLILMWLGEQITERGIGNG 183
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLG-VFTIVTMWAVVVTEGCRKV 249
+SLII GI+ + + M+ S++ PF + +LG VF ++ V++T+G RK+
Sbjct: 184 ASLIIFAGIIARLPKNIMDMIRD---DSIK--PFDILILGIVFILLIALTVILTQGVRKI 238
Query: 250 KLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
LQY G ++ A + + F +N + + P++ + LL FP + +L
Sbjct: 239 PLQYGKKMQGRRMVQAQSQS---------LSFKLNSASVMPIIFASSLLLFPQTVLGMLA 289
Query: 306 SP---------FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIAD 354
Q ++ L+P + YY IY + F F A P E+A+
Sbjct: 290 GDGSGQTTVSWLAQQMQVWLDPFAPSFVKQLPYYFIYTVLIIFFAYFYTAIYINPSELAE 349
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSS----TILDHYLRRINE 410
L K G IP ++PG T EY+ K G + L+ LA + ++D + +
Sbjct: 350 NLKKYGGFIPGIRPGANTKEYVEKTLNRIILPGAVFLAGLALAPYFIINLMDLKANQNIQ 409
Query: 411 G--FSIGFTSVLIIVGSIIELRRSYQAYNVM 439
G ++ G TS++IIVG ++ + +A +M
Sbjct: 410 GLAYTFGGTSLMIIVGVALDTLKQIEAQLIM 440
>gi|306832567|ref|ZP_07465707.1| preprotein translocase subunit SecY [Streptococcus bovis ATCC
700338]
gi|336063433|ref|YP_004558292.1| preprotein translocase subunit SecY [Streptococcus pasteurianus
ATCC 43144]
gi|304425325|gb|EFM28451.1| preprotein translocase subunit SecY [Streptococcus bovis ATCC
700338]
gi|334281633|dbj|BAK29206.1| preprotein translocase SecY subunit [Streptococcus pasteurianus
ATCC 43144]
Length = 434
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 218/435 (50%), Gaps = 53/435 (12%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 79
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG + + +F
Sbjct: 14 NVRNKIFFTLFIILVFRIGTHITVPGINAKSLEQLGELPFLNMLNLVSG--NAMSNF--- 68
Query: 80 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 69 ---SVFSMGVSPYITASIIVQLLQMDILPKFVEWSKQGEVGRRKLNQATRYISLVLAFVQ 125
Query: 139 AV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++ I A ++ +I ++ +VK ++ LL G+M ++W+ + I++ GFG G S+II
Sbjct: 126 SIGITAGFNTLSNISLVSTPNVKTYLLIGALLTTGSMIVTWLGEQITDKGFGNGVSMIIF 185
Query: 197 VGILT---GYTETLYKML------SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
GI++ T+Y+ S LL S + F+ L+ + + V +
Sbjct: 186 AGIISSIPNAISTIYEDFFVNVRSSDLLSSYI----FVALLVVAVLAIVFFTTFVQQAEY 241
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 306
K+ +QY KL A S Y+P INP+G+ PV+ + + PS + ++ +
Sbjct: 242 KIPIQYT--KLVQGAPTSS-------YLPLKINPAGVIPVIFASSITTIPSTIIPLISNG 292
Query: 307 ---PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGA 361
P+ ++ LN +T G +YA + LF+ F + P++ A+ L K +
Sbjct: 293 KDIPWLTTLESFLNYQTPSGM------VVYAVLIILFSFFYTFVQVNPEKTAENLQKGAS 346
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
IP+V+PG+ T EY++ + G + L+ ++ + I + ++ ++G TS+LI
Sbjct: 347 YIPSVRPGRETEEYMSSLLKKLATVGSIFLAFISLTPIIAQQAM-NLSSSIALGGTSLLI 405
Query: 422 IVGSIIELRRSYQAY 436
++ + IE + + Y
Sbjct: 406 LISTGIEGMKQLEGY 420
>gi|330505187|ref|YP_004382056.1| preprotein translocase subunit SecY [Pseudomonas mendocina NK-01]
gi|328919473|gb|AEB60304.1| preprotein translocase subunit SecY [Pseudomonas mendocina NK-01]
Length = 442
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 205/427 (48%), Gaps = 36/427 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF---GAELK 81
SE+ RL + I++ RIG IP+PG + RL D G++ L + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRL--ADLFRQNEGTILSLFNMFSGGALER 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-- 139
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y + +L A ++A
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTLVLAFVQAIG 133
Query: 140 --VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
V +A + +S+ H V +T F V GAM M W+ + I+E G G G S++I
Sbjct: 134 MSVGLASQGVAFSVDFGFH---FVAITTF--VAGAMFMMWLGEQITERGVGNGISMLIFA 188
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
GI+ G + + + + + +GLL V I + V + G R++ + Y
Sbjct: 189 GIVAGLPSAIGQSFESARQGDINIFALIAIGLLAVAII--GFVVFIERGQRRIAVHY--- 243
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQHV 312
A + ++P +N +G+ P + + LL FP+ L + G + Q +
Sbjct: 244 --AKRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSLLLFPASLGTWFGQSEGLGWLQDI 301
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ + P + + I+ F + +F+ PK++A+ L K GA IP ++PG+ +
Sbjct: 302 SQAIAPGQPLNILLFSAGIIFFCFFYTALMFN----PKDVAENLKKSGAFIPGIRPGEQS 357
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRR 431
Y+ + +G L + T+ +L +L+ N F +G TS+LI+V +++
Sbjct: 358 ARYIDGVLTRLTLFGALYM----TAVCLLPQFLQVAANVPFYLGGTSLLIVVVVVMDFMS 413
Query: 432 SYQAYNV 438
Q++ V
Sbjct: 414 QVQSHLV 420
>gi|328953138|ref|YP_004370472.1| preprotein translocase subunit SecY [Desulfobacca acetoxidans DSM
11109]
gi|328453462|gb|AEB09291.1| preprotein translocase, SecY subunit [Desulfobacca acetoxidans DSM
11109]
Length = 437
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 211/436 (48%), Gaps = 48/436 (11%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E++RR+ VT +L+ + RIG IP PG D + + + G++ L D GA +LS
Sbjct: 13 ELKRRIIVTLLLLAVYRIGCHIPTPGIDADAL-MSFFARHRGTIFGLFDMFSGGALERLS 71
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW------------IS 131
F LGI P I ASI+M+++ ++P+L +L KEG G +KIK Y + IS
Sbjct: 72 VFALGIMPYISASIIMELMKVVIPALDKLYKEGEAGQKKIKQYTRYGTVILSAIQGLGIS 131
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+G LE + + +P ++ ++T L G + W+ + I+E G G G
Sbjct: 132 MG---LEGMGMESGGVPVVLHPGW---AFRLMTVLTLTSGTAFIMWLGEQITERGIGNGI 185
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SLII GI+ + + QL+ + + ++ + V + V + G R++ +
Sbjct: 186 SLIIFAGIVARMPSAIINTM-QLVKTGEIGIILIFLIMILMIAVVGFIVFMERGQRRIPV 244
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
QY + R T ++P +N +G+ P + + +L FP+ +A+ + + +
Sbjct: 245 QYA--RRVVGRRMYGGQTT---HLPLKVNSAGVIPPIFASSILMFPATIATFINVDWVRR 299
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 369
E+++P GA ++ +Y F+ F F A P ++A+ + K G IP ++PG
Sbjct: 300 ATELISP----GA--LIHEILYVIFIIFFCYFYTAVTFNPVDVAENMKKYGGYIPGLRPG 353
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE- 428
K T +Y+ +I + G L +S + T+L ++R N F G T++LI+VG ++
Sbjct: 354 KPTSDYIERILSRITLGGALYVSFVCVMPTVL---VQRFNVPFYFGGTALLIVVGVAMDT 410
Query: 429 --------LRRSYQAY 436
L R Y+ +
Sbjct: 411 VGQIESHMLTRHYEGF 426
>gi|225850755|ref|YP_002730989.1| preprotein translocase, SecY subunit [Persephonella marina EX-H1]
gi|225644850|gb|ACO03036.1| preprotein translocase, SecY subunit [Persephonella marina EX-H1]
Length = 430
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 215/438 (49%), Gaps = 35/438 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
E+R R+ T +++ + R+G IP+PG D + Q Y + G++ + + GA +L
Sbjct: 12 KELRERIIFTLLMLALYRLGTHIPVPGVDTAAL-QHYFNAAGGALFNIYNLFSGGALGRL 70
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEAVI 141
S F LGI P I A+I+MQ+L ++P+L + +KE D G KI Y ++++G A ++
Sbjct: 71 SVFALGIMPYISAAIIMQLLTAVIPTLERYQKEEGDYGRWKITQYTRYLTIGIAGFQSFA 130
Query: 142 VACY--SLPYSIYAA---SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++ + +L A +++ V++T ++ G + + W+ + I+E G G G S++I
Sbjct: 131 LSLWISNLKTETGQALISENAIVFVLMTTVIVTTGTVFLMWVGEKITEFGIGNGISMLIL 190
Query: 197 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKLQYYG 255
I+ + + L + F +G+ L + +V + + E R++ +QY
Sbjct: 191 ASIVVSIPNAIIQSYELLRAGDLTV--FQVGVALAIIIVVVAGIIYIQEAERRIPIQY-- 246
Query: 256 FKLASAAREDSPI-TEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL--GSPFWQHV 312
AR + I YIPF +NP+G+ P++ LL FP+ +A + S + +
Sbjct: 247 ------ARRNVGIGASTASYIPFKLNPAGVIPIIFAVALLMFPATIAQMFVEQSQIARMI 300
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGK 370
+ L+P++ +VY+ Y + F F A L P +IAD L K GA IP ++ G
Sbjct: 301 VDYLSPQS------YVYFIFYVGLIIFFAYFYTAILINPNDIADNLRKSGAFIPGIRAGS 354
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
T EYL + + F G + L+ +A L +L N F G TS LI+V ++
Sbjct: 355 QTAEYLNHVLSRIVFPGSIFLASIAVLPMFLIKWL---NVPFYFGGTSALIVVVVALDTL 411
Query: 431 RSYQAYNVMPSLSKALRR 448
+A+ M L+R
Sbjct: 412 HQIEAHLAMKKYEGFLKR 429
>gi|408371643|ref|ZP_11169405.1| preprotein translocase subunit SecY [Galbibacter sp. ck-I2-15]
gi|407742891|gb|EKF54476.1| preprotein translocase subunit SecY [Galbibacter sp. ck-I2-15]
Length = 451
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 206/433 (47%), Gaps = 38/433 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF--GAELKL 82
E+R R+ VT L+++ R G + LPG D ++L + G + L F GA
Sbjct: 15 EELRSRIIVTLGLLLVYRFGAQVVLPGIDTQQLAELSSRTDGGGLLGILNAFTGGAFANA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI- 141
SFF LGI P I ASI++Q++ +P L +L+KEG G + I W+++G +++A
Sbjct: 75 SFFALGIMPYISASIVVQLMGLAIPYLQKLQKEGESGRKTINQITRWLTIGICLVQAPAY 134
Query: 142 ---VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+ +P S + + ++ +LV G + W+ + I++ G G G SL+I VG
Sbjct: 135 LYSLGSLGVPDSAFIVGKGLDFMIPAVLILVTGTIFAMWLGEKITDKGIGNGISLLIMVG 194
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ + + S +L + ++ ++ + +++ R++ +Q Y +
Sbjct: 195 IIATMPQAFVQEFVSRTSGSNGGLMLILIEIIIWFVIILACIMLVMAVRQIPVQ-YARRT 253
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
AS E + + YIP +N SG+ P++ ++ P+ L I P
Sbjct: 254 ASGGYEKN-VFGSRQYIPLKLNASGVMPIIFAQAIMFAPAYLGRI-------------GP 299
Query: 319 ETSVGARPWV-----------YYTIYAFFVFLFNIFDIA-NLP-KEIADYLNKMGARIPN 365
GA W+ Y ++A + +F F A +P ++AD L + G IP
Sbjct: 300 LQDTGAGQWLQTEFSNIFGLWYNIVFAVLIIIFTYFYTAITVPTNKMADDLKRSGGFIPG 359
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIV 423
++PGK T +YL KI + F G L L+++A I+ L + +G+++ G TS+LI+V
Sbjct: 360 IRPGKETADYLDKIMSLITFPGSLFLALIAVLPAIILS-LMGVQQGWALFYGGTSLLIMV 418
Query: 424 GSIIELRRSYQAY 436
G I+ + +Y
Sbjct: 419 GVAIDTMQQVNSY 431
>gi|261211131|ref|ZP_05925420.1| preprotein translocase SecY subunit [Vibrio sp. RC341]
gi|260839632|gb|EEX66243.1| preprotein translocase SecY subunit [Vibrio sp. RC341]
Length = 444
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 201/425 (47%), Gaps = 31/425 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++ RLF +++ R G F+P+PG D ++ D G++ E+ + GA +
Sbjct: 17 SELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLA-DLFEQQKGTIIEMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A +A+ +
Sbjct: 76 SIFALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A LP + ++ LV G M + W+ + I+E G G G S++I GI+
Sbjct: 136 AT-GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + + + Q + +L + F ++ + V + G R++ + Y A
Sbjct: 195 AGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVI-YFVVFMERGQRRIVVNY-----AK 248
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-----SPF-W-QHVK 313
+ ++P IN +G+ P + + ++ FP LA G S F W V
Sbjct: 249 RQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVS 308
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
L+P +P +Y +YA + F F A + P+E AD L K GA +P ++PG+
Sbjct: 309 LALSP-----GQP-LYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQ 362
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +Y+ K+ G L ++ + I + + N F G TS+LI+V I++
Sbjct: 363 TAKYIDKVMTRLTLAGALYITFIC---LIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMA 419
Query: 432 SYQAY 436
Q +
Sbjct: 420 QVQTH 424
>gi|386812717|ref|ZP_10099942.1| protein translocase subunit SecY [planctomycete KSU-1]
gi|386404987|dbj|GAB62823.1| protein translocase subunit SecY [planctomycete KSU-1]
Length = 460
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 214/455 (47%), Gaps = 53/455 (11%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 80
E+R+++ +T LI + R+G +IP+PG D ++ + F V +L GA
Sbjct: 13 ELRKKVLITLGLIALCRVGVYIPIPGIDTTVLKSYFHQFTQTGVGQLLGLVDMFAGGALT 72
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+ F LG+ P I ASI+ Q+L ++P L +L+KEG G +KI Y ++G + +A
Sbjct: 73 SGAIFGLGVMPYISASIIFQLLVGVIPYLEKLQKEGEVGRKKINQYTRLATVGLCLFQAF 132
Query: 141 IV--ACYSLPYS----IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
++ Y++ ++ I + M+ A LL G MT+ WI + I E G G G S++
Sbjct: 133 VMTRTLYTVEFNGVPVIPVYLQGIGFQMMAALLLTTGTMTLMWIGEQIEEHGIGSGISIV 192
Query: 195 ICVGILTGYTETLYKMLSQLLGS---SVRWWPFMLG------LLGVFTIVTMWAVVVTEG 245
I VGI+ E L SQ++ + SV +G LLG+F + V +T+G
Sbjct: 193 IMVGII----ERLPWAFSQVIQNFTFSVTPAEHQIGIVKLLVLLGMFLAIVGGVVYITQG 248
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
R++ +Q A R ++P +N +G+ P++ LL FP A+I+
Sbjct: 249 QRRIPVQQ-----AKHTRGRKVYGGQRHFLPLRVNQAGVMPIIFAQSLLIFP---AAIM- 299
Query: 306 SPFWQHVKEILNPET----------SVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIA 353
Q ++ L+P T + +Y +Y + F F I PKE++
Sbjct: 300 ----QGIQARLDPGTVGYWMTSRLSDILQGGVIYVILYILLITFFCYFWTAIQFNPKEMS 355
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTIL--DHYLRRINEG 411
+ + G+ IP ++PG T EYL I G L+++A ++ L R G
Sbjct: 356 NNMKDYGSFIPGIRPGHRTAEYLESIMGKITLAGAAFLALIAILPKLVAGGFELNRAIAG 415
Query: 412 FSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKAL 446
F G T +LIIVG +++ + +++ +M S L
Sbjct: 416 FY-GGTGLLIIVGVALDMVQRIESHMIMRQYSGFL 449
>gi|431932128|ref|YP_007245174.1| preprotein translocase subunit SecY [Thioflavicoccus mobilis 8321]
gi|431830431|gb|AGA91544.1| preprotein translocase, SecY subunit [Thioflavicoccus mobilis 8321]
Length = 450
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 193/421 (45%), Gaps = 21/421 (4%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
E+R+RLF +++ RI F+P+PG + + + +D F GA + S
Sbjct: 20 ELRQRLFFVIGALLVYRIATFVPVPGVNPEALAALFDQHQGSMLDLFNMFSGGALQRASI 79
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVAC 144
LGI P I ASI+MQ++ ++P L QL+KEG G KI SY + +L A +A+ ++
Sbjct: 80 VALGIMPYISASIIMQMMAAVIPKLEQLKKEGESGRRKITSYTRYGTLVLATFQAIGISV 139
Query: 145 ----YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
++ S V A LV G M + W+ + ISE G G G SLII GI+
Sbjct: 140 ALQGQAVGGSAIVTQSGFGFVFTAAVSLVTGTMFLMWLGEQISERGIGNGISLIIFSGIV 199
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G L +L+ + +L + + VT + V V G R++ + Y A
Sbjct: 200 AGLPSAAGGTL-ELVRTGEMNALTVLAMFALALAVTAFVVFVERGQRRITVNY-----AR 253
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 320
+ + ++P +N +G+ P + + ++ FP L GS + ++ + +
Sbjct: 254 RQQGRKLMAAQSTHLPLKLNMAGVIPPIFASSIILFPGTLGQWFGSS--EDMRWLADFAA 311
Query: 321 SVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTK 378
+ +Y +YA + F F A + PK+ AD L + GA IP ++PG+ T Y+
Sbjct: 312 KLSPGEPIYVLLYASAIIFFCFFYTALIFNPKDTADNLKRSGAFIPGIRPGEQTARYIDS 371
Query: 379 IQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVGSIIELRRSYQAYN 437
+ G +I T +L +L N F G TS+LI+V ++ QA+
Sbjct: 372 VMTRLTVGG----AIYITGVCLLPEFLILGWNVPFYFGGTSLLIVVVVTMDFMAQVQAHL 427
Query: 438 V 438
V
Sbjct: 428 V 428
>gi|262373501|ref|ZP_06066779.1| preprotein translocase, SecY subunit [Acinetobacter junii SH205]
gi|262311254|gb|EEY92340.1| preprotein translocase, SecY subunit [Acinetobacter junii SH205]
Length = 452
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 207/431 (48%), Gaps = 40/431 (9%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR +F+ L+V R+G IPLPG D + + F + LG F GA
Sbjct: 23 YREIIRRLMFLIGALLVF-RLGAHIPLPGIDNVALAR---FFKANEGTFLGLFNMFSGGA 78
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y + +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRYGTLFLALVQ 138
Query: 139 AVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
V + + I S +V VT+ LV G M + W+ + I+E G G G S+II
Sbjct: 139 GVGMCAGLISQGITLTSGLAFYVPAVTS--LVAGTMFLMWLGEQITERGVGNGISMIIFA 196
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGF 256
GI+ G + + + + + + L + G+ ++ + A+V E R++ + Y
Sbjct: 197 GIVAGLPNLVIQSFTTV--QNGQGSLIGLAVFGLLSLAVLAAIVFIEKAQRRIPVNY--- 251
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP--------- 307
A + T + ++P IN +G+ P + + LL FP+ L LGS
Sbjct: 252 --AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGIIKR 309
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPN 365
Q + +L+P +P +Y ++ + F F A + PKE+++ L + GA +P
Sbjct: 310 SLQDLALVLSP-----GQP-LYLMLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPG 363
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T YL I F G + ++++ +L F +G TS+LI+V
Sbjct: 364 IRPGEQTARYLDHILNRLTFIGAIYITVVCLMPMVLQ---SSFGIPFHLGGTSLLIVVVV 420
Query: 426 IIELRRSYQAY 436
+++ QA+
Sbjct: 421 VMDFMAQLQAH 431
>gi|134103241|ref|YP_001108902.1| preprotein translocase subunit SecY [Saccharopolyspora erythraea
NRRL 2338]
gi|291007967|ref|ZP_06565940.1| preprotein translocase subunit SecY [Saccharopolyspora erythraea
NRRL 2338]
gi|133915864|emb|CAM05977.1| preprotein translocase [Saccharopolyspora erythraea NRRL 2338]
Length = 437
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 198/423 (46%), Gaps = 48/423 (11%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV-SGSVD-----ELGDFGAEL 80
++RR++ T ++V+ R+G IP PG I Q + SGS L GA L
Sbjct: 13 DLRRKILFTLGMVVLYRLGATIPSPGVSYPNIQQCIVQLQGSGSQSVYSLLNLFSGGALL 72
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+LS LGI P I ASI++Q+L ++P QL+KEG G K+ Y ++++ A+L+A
Sbjct: 73 QLSVLSLGIMPYITASIIIQLLQVVIPRFEQLKKEGQSGQAKLTQYTRYLAIALAVLQAT 132
Query: 141 IVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
V ++ ++ SV +++V ++ GA + W+ + I+E G G G SL
Sbjct: 133 GVVALAVRGQLFQGCSVPVIPDDSVLNLIVIVIVMTAGAALLMWMGELITERGIGNGMSL 192
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQ 252
+I I +L+ G + ++ F + + VV + + R++ +Q
Sbjct: 193 LIFTSIAARVPAEGGNILNSHGG-------LVFSVVCAFAVAIIATVVFIEQAQRRIPVQ 245
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP--FWQ 310
Y + + Y+P +N +G+ PV+ + LL P +L + G+ +W
Sbjct: 246 YAKRMIGRRMYGGT-----STYLPLKVNQAGVIPVIFGSSLLYLPQLLGQLAGNQNTWWA 300
Query: 311 HVKE--ILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNV 366
+ I++P + WV+ +Y + F F I P+E AD + K G IP +
Sbjct: 301 QFIQTYIVDPAS------WVHILLYMAMIVFFAYFYVSITFNPEERADEMKKFGGFIPGI 354
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI------NEGFSIGFTSVL 420
+PG+ T EYL + + G L L I+A IL ++ I N+ F G T+VL
Sbjct: 355 RPGRPTAEYLNFVLSRITLPGSLYLGIIA----ILPNFFLGITGGQGQNQNFPFGGTAVL 410
Query: 421 IIV 423
I+V
Sbjct: 411 IMV 413
>gi|312127245|ref|YP_003992119.1| preprotein translocase, secy subunit [Caldicellulosiruptor
hydrothermalis 108]
gi|311777264|gb|ADQ06750.1| preprotein translocase, SecY subunit [Caldicellulosiruptor
hydrothermalis 108]
Length = 435
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 209/448 (46%), Gaps = 68/448 (15%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
++RR++ T +I++ R+G FIP+P DR D L+ V + LG F G
Sbjct: 13 DLRRKILFTLFMILVFRLGAFIPVPYIDR-----DALAKVINDLTMLGFFDVVAGGTFKN 67
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV- 140
+S F + ++P I +SI+MQ+L +P+L +L K+G +G +K+ W G AIL +
Sbjct: 68 MSIFAMSVTPYINSSIIMQLLTIAIPALEELAKQGEEGRKKLAE---WTRYGTAILAFIQ 124
Query: 141 IVACY-----------SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
V Y +P I A + L G + + WI + I+E+G G
Sbjct: 125 AVGIYFGLKNATGLTGGVPV-ITAQGQGFLGFITITITLTAGTVFLMWIGEQITENGIGN 183
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGL--------LGVFTIVTM---- 237
G SL+I GI+ S++ V W ++ L +GV + M
Sbjct: 184 GISLLIFAGII-----------SRIPNGVVSLWNYVAKLNEFSLTSIIGVILFIVMALAI 232
Query: 238 --WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLA 295
+ +VV EG R++ +QY A +IP +N +G+ P++ L+
Sbjct: 233 IVFIIVVQEGERRIPVQY-----AKRVVGRRVYGGQSTHIPIKVNIAGVIPIIFAISLVM 287
Query: 296 FPSILASIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEI 352
P+ +A S F++ VK + + W Y YA F+ F F A + P EI
Sbjct: 288 LPTTIAQFFPNSGFYKFVKAYFSSGSF-----W-YTFFYALFIIGFTYFYTAIVFNPVEI 341
Query: 353 ADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILD-HYLRRINEG 411
A+ L G IP ++PGK T++++T++ + F G L L+ +A T++ + ++N
Sbjct: 342 ANNLKNNGGFIPGIRPGKPTVDFITRVLSKVTFAGALFLAFIAILPTLVGIMFKHQLNIY 401
Query: 412 FSIGFTSVLIIVGSIIELRRSYQAYNVM 439
F G TS+LI+VG +E R +A +M
Sbjct: 402 F--GGTSLLIVVGVALETIRQMEAQMLM 427
>gi|78185540|ref|YP_377974.1| preprotein translocase subunit SecY [Synechococcus sp. CC9902]
gi|78169834|gb|ABB26931.1| protein translocase subunit secY/sec61 alpha [Synechococcus sp.
CC9902]
Length = 439
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 192/400 (48%), Gaps = 25/400 (6%)
Query: 47 FIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCH 104
+IP+PG DR Q D + G +D G L F LGI P I ASI++Q+L
Sbjct: 43 YIPMPGIDREAFKQFIDQGGQLIGFLDIFTGGGIS-TLGIFALGILPFINASIILQLLTA 101
Query: 105 IVPSLVQLRK-EGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMV 163
+P L L+K EG G KI +++LG+ ++++V+ A Y++ S V V+
Sbjct: 102 SLPQLEDLQKNEGEAGRRKIAQITRYVALGWGLIQSVVFAMILRQYAVEGLSEVV-FVVQ 160
Query: 164 TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKML--SQLLGSSVRW 221
TA LV G+M + WI + I+E G GQG+SL+I + I+ TL + +Q
Sbjct: 161 TALALVTGSMVVMWIAEVITERGIGQGASLVIFLNIVATLPRTLGATIEAAQTGDRDTVL 220
Query: 222 WPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINP 281
+L L+ + TIV + + V EG R++ + ++ A + + Y+P +N
Sbjct: 221 GIVVLVLVFLATIVGI--IFVQEGARRIPIVSAKRQVGGAG----ALPTRQSYLPLKLNA 274
Query: 282 SGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFN 341
G+ P++ + L+ P +A++ S + +LNP S PW Y + + F+
Sbjct: 275 GGVMPIIFASALIFLPVTVANLTKSEWLIRAASMLNPSAS---NPWPYALAFFTLILGFS 331
Query: 342 IF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSST 399
F + P +IA L + G IP V+PG AT YL+ +Q LL + S
Sbjct: 332 YFYASLTVNPADIATNLKRGGVAIPGVRPGSATTNYLSGVQNRLT----LLGGLFLGSVA 387
Query: 400 ILDHYLRR---INEGFSIGFTSVLIIVGSIIELRRSYQAY 436
I+ + R + +G TS+LI+VG I+ + Q Y
Sbjct: 388 IIPAAVERATNVQTFQGLGATSLLILVGVAIDTAKQVQTY 427
>gi|295109494|emb|CBL23447.1| protein translocase subunit secY/sec61 alpha [Ruminococcus obeum
A2-162]
Length = 438
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 211/439 (48%), Gaps = 37/439 (8%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL 80
F E+RR+L +I I RIG +P+PG D + Q + S + + F G+
Sbjct: 9 FRVKEMRRKLLYLLAMIFIIRIGSQLPIPGVDSSVFKQWFKSNTGDAFNFFDAFTGGSFE 68
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+S F L I+P I +SI++Q+L +P+L ++ ++G +G +K+ + ++++G A+ E++
Sbjct: 69 SMSVFALNITPYITSSIIIQLLTIAIPALEEMHRDGEEGRKKMTAITRYVTVGLALFESI 128
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ +I +K V+V L AM M WI + I+E G G G S+++ V I+
Sbjct: 129 AMTVGFARGNIVKDMSFLKGVVVIVSLTAGSAMLM-WIGERITEKGVGNGISIVLAVNIV 187
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
+ + + + + G++ + +V ++ +++ R++ +QY K+
Sbjct: 188 SRIPSDMTTLYENFIKGKTIAKGMLAGVVVFAIIMVVVVFVLILNGAERRIPVQYSK-KM 246
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV-KEILN 317
T IP +N +G+ P++ + +++FP ++A G + EIL
Sbjct: 247 VGRKMMGGQTTN----IPLKVNTAGVIPIIFASSIMSFPGVIAQFAGKANGTGIGSEILR 302
Query: 318 PETSVG----ARP---W---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVK 367
+S ++P W VY + FF + + I P E+AD + K G IP ++
Sbjct: 303 GLSSSNWCNPSQPQYSWGLLVYVVLCVFFAYFYT--SITFNPLEVADNIKKQGGFIPGIR 360
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSI 426
PGK T +YLT + F G + L I+A ++ + + S G TS++I+VG +
Sbjct: 361 PGKPTSDYLTNMLNYIIFIGAVGLIIVA----VIPFFFNGVFGANVSFGGTSIIIVVGVV 416
Query: 427 IE---------LRRSYQAY 436
+E L R+Y+ +
Sbjct: 417 LETLNQIESQLLVRNYKGF 435
>gi|288942052|ref|YP_003444292.1| preprotein translocase subunit SecY [Allochromatium vinosum DSM
180]
gi|288897424|gb|ADC63260.1| preprotein translocase, SecY subunit [Allochromatium vinosum DSM
180]
Length = 450
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 195/420 (46%), Gaps = 21/420 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+E+RRRL +++ RIG FIP+PG + + + +D F GA + S
Sbjct: 19 TELRRRLMFLLGALLVYRIGTFIPVPGVNPEALAILFDQNQGSILDMFNMFSGGALERAS 78
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LG+ P I ASI++Q++ +VP L QL+KEG G KI Y + ++ A +A+ ++
Sbjct: 79 LFALGVMPYISASIIVQLMTAVVPQLEQLKKEGEAGRRKITQYTRYGTVFLATFQAIGIS 138
Query: 144 C----YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
+ S A V V LV G M + W+ + I+E G G G S+II GI
Sbjct: 139 MALQGQTAGGSALVAHSGVGFVFTATVSLVTGTMFLMWLGEQITERGIGNGISMIIFGGI 198
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 259
+ G L L +L + +L L + VT + V V G R++ + Y A
Sbjct: 199 VAGLPAALGGTL-ELARTGEMNALAVLALFAMALAVTAFVVFVERGQRRITVNY-----A 252
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 319
+ + ++P +N +G+ P + + ++ FP L GS + ++ I +
Sbjct: 253 RRQQGRKMMQAQSTHLPLKLNMAGVIPPIFASSIILFPGTLGQWFGSS--EDLRWIADIT 310
Query: 320 TSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLT 377
+ + VY +YA + F F A + KE AD L + GA IP ++PG+ T Y+
Sbjct: 311 SKLAPGEPVYVLLYASAIIFFCFFYTALVFNAKETADNLKRSGAFIPGIRPGEQTARYID 370
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ G +I T+ +L +L N F G TS+LI+V +++ QA+
Sbjct: 371 GVMTRLTAAG----AIYITAVCLLPEFLIVGYNVPFYFGGTSLLIVVVVVMDFMAQVQAH 426
>gi|226226299|ref|YP_002760405.1| preprotein translocase secY subunit [Gemmatimonas aurantiaca T-27]
gi|226089490|dbj|BAH37935.1| preprotein translocase secY subunit [Gemmatimonas aurantiaca T-27]
Length = 448
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 211/432 (48%), Gaps = 27/432 (6%)
Query: 17 NNAAES----FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE 72
N AA++ + E+ ++ T + +VI R+G I PG D + + + G +
Sbjct: 6 NPAAQAVANIYRTPELWAKITFTFMCMVIYRLGSHITAPGIDVQALTDYFTRQQGGGLLG 65
Query: 73 LGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
L D G + + F LGI P I ASI +Q+ ++P++ +++K+ +G +K+ Y +
Sbjct: 66 LYDMFVGGGLSRATVFALGIMPYISASIFVQIGGAVLPNVDKMQKDE-EGRKKLTQYTRY 124
Query: 130 ISLGFAILEAVIVACY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
+++ A+++A A + SLP ++ M+ L GA+ + W+ + I+E G
Sbjct: 125 LTVVLALVQAYGFALFTASLPAAVSRPGPWFTIQMM--LFLTTGAIFVMWLGEQITERGL 182
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC- 246
G G+SLII I+ ++++ + + ++ P L +LG+ + + VV
Sbjct: 183 GNGASLIIFFSIVERMWPSIFQTFNFVTTGAIA--PLSLVVLGLVMVAVVAGVVAITVAA 240
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R+V +Q +A + ++ +IP IN +G+ P++ ++ P LA G+
Sbjct: 241 RRVLIQIPQRTMARGRQREA----ARNFIPLRINTAGVMPIIFAQSVIVIPGALAQFSGN 296
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
P Q + E NP+ G PW+Y+ + A + LF F I P ++A+ L K G +P
Sbjct: 297 PKLQEIAEYFNPQ---GPNPWLYFVLSAILIMLFTYFYTSIIFNPVDLAENLKKQGGFVP 353
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
+KPG T EY+ ++ G + L+ +A ++ R +N F+ G TS+LI+VG
Sbjct: 354 GIKPGAKTAEYIEQVVERITLPGAIFLTFIALMPIVIA---RIVNVPFAFGGTSLLIVVG 410
Query: 425 SIIELRRSYQAY 436
++ Q +
Sbjct: 411 VALDTMAQMQQH 422
>gi|443673905|ref|ZP_21138951.1| Preprotein translocase subunit secY [Rhodococcus sp. AW25M09]
gi|443413505|emb|CCQ17289.1| Preprotein translocase subunit secY [Rhodococcus sp. AW25M09]
Length = 440
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 187/392 (47%), Gaps = 40/392 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSG--SVDELGDFGAEL 80
++RR++ T L+ + R G +P PG D R I Q +G S+ L GA L
Sbjct: 13 DLRRKILFTLGLVALYRFGATLPSPGVDYANVRACIDQVSGGDSAGIYSLINLFSGGALL 72
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+ AIL+A
Sbjct: 73 QLSVFAIGIMPYITASIIVQLLTVVIPKFEELRKEGQSGQAKMTQYTRYLSIALAILQAT 132
Query: 141 -IVACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
+VA S + A S+ +++ ++ GA + W + I+E G G G SL
Sbjct: 133 GLVALASRGQLLQGCQQDIIADQSIFGLVIIVLVMTAGAAVVMWFGEVITERGVGNGMSL 192
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
+I GI + +LS G + F F I+T V V +G R++ +QY
Sbjct: 193 LIFAGIASRIPSEGNSILSSRGGLVFGFVCF-----AAFLIIT-GVVFVEQGQRRIPVQY 246
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS------P 307
+ S Y+P +N +G+ PV+ + LL P+++A + +
Sbjct: 247 AKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLIAQLTSASTAADPS 301
Query: 308 FWQHV--KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARI 363
+WQ + + ++NP A P VY I+ + F F +A P+E AD + K G I
Sbjct: 302 WWQRIINEYLVNP-----ANP-VYIAIFFGLIVFFTYFYVAITFNPEERADEMKKFGGFI 355
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILA 395
P ++PGK T +YL + + G + L +A
Sbjct: 356 PGIRPGKPTADYLNYVLSRITLPGSIYLGTIA 387
>gi|336453226|ref|YP_004607692.1| preprotein translocase subunit SecY [Helicobacter bizzozeronii
CIII-1]
gi|335333253|emb|CCB79980.1| preprotein translocase secY subunit (TC 3.A.5.1.1) [Helicobacter
bizzozeronii CIII-1]
Length = 419
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 208/423 (49%), Gaps = 36/423 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-----AELK 81
I ++F+T + + R+ ++P+PG D I F S S + LG F A +
Sbjct: 4 AIATKIFITLGYLFLYRVLAYVPIPGVDLAAIKS---FFDSNSSNALGLFNMFSGNAVSR 60
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
LS LGI P I ASI+M++L P+L +++KE DG +K + + ++ I++AV
Sbjct: 61 LSIISLGIMPYITASIIMELLSATFPNLAKMKKE-RDGMQKYMQIVRYATILITIIQAVS 119
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVC------GAMTMSWICDTISESGFGQGSSLII 195
V+ + L SI S+ + + FLL+ G M + WI + I++ G G G SLII
Sbjct: 120 VS-FGLR-SIGHGSNGAIMISMQTFLLIATFSMLTGTMLLMWIGEQITQRGVGNGISLII 177
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIV--TMWAVVVTE-GCRKVKLQ 252
GI++G + + + + +L L+G+F I+ T+++++ E R++ +
Sbjct: 178 FAGIVSGIPSAIAGTFNLVNTGVIN----VLVLIGIFVIILGTIFSIIYIELAERRIPIS 233
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
Y A + V YIP +N SG+ P + + LL FPS + + Q +
Sbjct: 234 Y-----ARKVMLQNQNKRVMNYIPIKLNLSGVIPPIFASALLVFPSTILQASSNHILQAI 288
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ LNP A + + + FF + ++ I K+IAD L + G I ++PG+ T
Sbjct: 289 ADFLNPHGY--AYNILMFLLIIFFAYFYS--SIVFNAKDIADNLKRNGGFIAGLRPGEGT 344
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+L + + FWG L L++++T IL ++ + F G T+VLI+V I+ +
Sbjct: 345 ANFLNSVASRLTFWGSLYLAVISTLPWIL---VKAMGVPFYFGGTAVLIVVQVAIDTMKK 401
Query: 433 YQA 435
+A
Sbjct: 402 IEA 404
>gi|390941181|ref|YP_006404918.1| protein translocase subunit secY/sec61 alpha [Sulfurospirillum
barnesii SES-3]
gi|390194288|gb|AFL69343.1| protein translocase subunit secY/sec61 alpha [Sulfurospirillum
barnesii SES-3]
Length = 420
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 203/423 (47%), Gaps = 31/423 (7%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-----AE 79
++ R++ VT I RI ++P+PG + +I + F S S + LG F A
Sbjct: 2 NQDLTRKILVTLGFIFAYRILAYVPVPGVNIEVIKE---FFDSNSSNALGMFNMFSGNAA 58
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+LS LGI P I ASI+M++L P+L +++KE DG K I + ++G I++A
Sbjct: 59 ERLSIISLGIMPYITASIIMELLAATFPALGKMKKE-RDGMVKYMQIIRYATIGITIVQA 117
Query: 140 VIVACYSLPYSIYAASHSVKHVMVT-----AFLLVCGAMTMSWICDTISESGFGQGSSLI 194
+ V+ + + ++ M T A ++ G M + WI + I++ G G G SLI
Sbjct: 118 IGVSVGLGGMTGRSGESAIMLDMTTFSAIAAASMLTGTMLLMWIGEQITQRGIGNGISLI 177
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY 254
I GI++G + ++ L+ + + ++G+L V + V G R+V + Y
Sbjct: 178 IFAGIVSGIPSAIGGTIN-LVNTGELNFLVVIGILLVILATVGSIIYVEMGERRVPISY- 235
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 314
+ + + Y+P +N SG+ P + + +L FPS + +P Q + +
Sbjct: 236 ----SRKVVLQNQHKRIMNYVPIKMNLSGVIPPIFASAILMFPSTIMQASTNPIVQAIHD 291
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKAT 372
LNP + +V+ + FV F F I K+I++ L K G IP V+PG++T
Sbjct: 292 FLNPNS------YVFNVLTFLFVIFFAYFYASIVFNAKDISENLKKQGGFIPGVRPGEST 345
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
YL + WG + L +++T +L ++ + F G T+VLI+V ++ R
Sbjct: 346 ALYLNDVAGRLTLWGSIYLGLISTLPWVL---VKVMGVPFYFGGTAVLIVVQVALDTMRK 402
Query: 433 YQA 435
+A
Sbjct: 403 IEA 405
>gi|385142714|emb|CCH23753.1| preprotein translocase SecY [Corynebacterium glutamicum K051]
Length = 440
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 204/430 (47%), Gaps = 46/430 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR-------RLIPQDYLSFVSGSVDEL 73
++F +++R+++F T +IV+ RIG IP PG D R + QD S S + L
Sbjct: 6 QAFKDADLRKKIFFTIAMIVLYRIGAQIPSPGVDYATISGRLRDLTQDQSSVYS--LINL 63
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
GA L+LS F +GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++
Sbjct: 64 FSGGALLQLSIFAIGIMPYITASIIVQLLTVVIPHFEELKKEGQSGQAKMMQYTRYLTVA 123
Query: 134 FAILEAV-IVACYSLPY------SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
A+L++ IVA + +A + ++V + GA+ + W+ + I+E G
Sbjct: 124 LALLQSSGIVALADREQLLGAGIRVLSADRNFFDLIVLVITMTAGAVLVMWMGELITEKG 183
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G SL+I GI T +L G F + L V I+ + V V +G
Sbjct: 184 VGNGMSLLIFAGIATRLPTDGMNILGNSGGVV-----FAVVLASVL-ILVIGVVFVEQGQ 237
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 238 RRIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNS 292
Query: 307 -------PFWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADY 355
+WQ + + P + W Y +Y F+ F + P E A+
Sbjct: 293 GSLEVSDNWWQRNIIAHLQTPSS------WQYIVLYFALTIFFSYFYVFVQYDPAEQAEN 346
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI-LDHYLRRINEGFS- 413
+ K G IP ++PG+ T EYL + F G L L+++A I LD + + G +
Sbjct: 347 MKKYGGFIPGIRPGRPTAEYLGFVMNRLLFVGSLYLAVIAVLPNIMLDLGVDAGSAGATP 406
Query: 414 IGFTSVLIIV 423
G T++LI+V
Sbjct: 407 FGGTAILILV 416
>gi|379012672|ref|YP_005270484.1| preprotein translocase secY subunit SecY [Acetobacterium woodii DSM
1030]
gi|375303461|gb|AFA49595.1| preprotein translocase secY subunit SecY [Acetobacterium woodii DSM
1030]
Length = 419
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 213/434 (49%), Gaps = 57/434 (13%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYL----SFVSGSVDELGDFGA 78
++RR++ +T L+ + R+G FIP+P D +L+ Q+ + + +SG G+FG
Sbjct: 13 DLRRKILITLALLFVYRLGSFIPVPFIDTAQLSQLVNQNGMFGLFNIISG-----GNFG- 66
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
K + F + I+P I ASI+M +L +PSL L+KEG +G +K+ Y ++++ A+++
Sbjct: 67 --KFTIFAMSITPYINASIIMNLLAFAIPSLEALQKEGEEGRKKLAQYTRFLTILLALIQ 124
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A+ SL + + V + G + ++ + I+E+G G G SLII +
Sbjct: 125 AL---GMSLSFGDLLTEKTTFTVFTVVLCITAGTAFLMYLGEQITENGIGNGISLIIFIS 181
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVT---------EGCRK 248
I+ S++ S V+ + ++ +G L + +++ +V EG R+
Sbjct: 182 IV-----------SRIPSSIVQMYQYVSIGTLNIISLIVFIVFIVVVIFGVVAVQEGQRR 230
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSP 307
+ +QY A +IP +N +G+ PV+ + L FP+ ++S S
Sbjct: 231 IPVQY-----AKRVVGRKMYGGQSTHIPMRVNMAGVIPVIFASSLTLFPATISSFFPTSA 285
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPN 365
F + T + W+ IY + F F A P +IAD + K G +P
Sbjct: 286 FANFI------STYLAWGSWLTNIIYVVLIIAFTYFYTAVTFNPYDIADNIKKQGGYVPG 339
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PGK T+EYL++I +GG+ L+I+A + +++ +N F G TS+LI++G
Sbjct: 340 IRPGKPTVEYLSRIMNRLTLFGGVFLAIIAVIPIFVGNFM-GVNLQF--GGTSLLIVIGV 396
Query: 426 IIELRRSYQAYNVM 439
+E + ++ +M
Sbjct: 397 ALETVKQIESEMMM 410
>gi|359728458|ref|ZP_09267154.1| preprotein translocase subunit SecY [Leptospira weilii str.
2006001855]
gi|417780965|ref|ZP_12428721.1| preprotein translocase, SecY subunit [Leptospira weilii str.
2006001853]
gi|421096717|ref|ZP_15557416.1| preprotein translocase, SecY subunit [Leptospira borgpetersenii
str. 200901122]
gi|410778936|gb|EKR63558.1| preprotein translocase, SecY subunit [Leptospira weilii str.
2006001853]
gi|410799962|gb|EKS02023.1| preprotein translocase, SecY subunit [Leptospira borgpetersenii
str. 200901122]
gi|456864506|gb|EMF82905.1| preprotein translocase, SecY subunit [Leptospira weilii serovar
Topaz str. LT2116]
Length = 460
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 220/455 (48%), Gaps = 47/455 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRL---IPQDYLS-FVSGSVDELGDFGAELKL 82
E+R+++ T ++++ R+G I +PG + + I D S + G VD GA LK
Sbjct: 13 ELRQKIIFTLSMLLLFRMGTHITIPGINPVVVAGIANDPSSEGLLGMVDLFAG-GALLKF 71
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I +SI+MQ+ +VPSL +L+KEG +G +KI Y + ++ ++++ V
Sbjct: 72 SIFALGIMPYISSSIVMQLFMVLVPSLQKLQKEGEEGRKKIGQYTKYGTVILCAIQSLAV 131
Query: 143 ACYSLPYSIYAASHSVKH------VMVTAFLLV------CGAMTMSWICDTISESGFGQG 190
+ +S ++ +V F L+ G + + W+ + I+E G G G
Sbjct: 132 IQLAKGWSTGTEMEPARYPGLINSSVVPYFYLIGILSITTGTVLLIWLGEQITERGIGNG 191
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SL+I GI+ E++ ++ S ++ +L LL +F ++ V++T+G RKV
Sbjct: 192 ISLLIFAGIIGRLPESMVQLFSTDTMDALN----VLILLILFILLISLTVLLTQGVRKVP 247
Query: 251 LQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
LQY G K+ A + IPF +N + + P++ + L+ FP + L S
Sbjct: 248 LQYGKQMVGRKMVQAKSQS---------IPFKVNGANVMPIIFASSLILFPQTIIQWLSS 298
Query: 307 -----PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKM 359
W + + NP + + YY IY + F F I P E+A+ L K
Sbjct: 299 SSEQWAGWAIIMDFFNPFSQIWYHALFYYVIYTSLIIFFAYFYTAIQFNPAELAENLKKY 358
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEG-----FS 413
G IP ++PG T EY+ K+ G + L+ LA + I+ +L N G ++
Sbjct: 359 GGFIPGIRPGSHTKEYIEKVLNRITLPGAMFLAGLALAPYIIIKFLDLSSNSGGGSLVYT 418
Query: 414 IGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
G TS+LI+VG +E + ++ +M + +++
Sbjct: 419 FGGTSLLIMVGVALETLKQIESQLLMRNYEGFMKK 453
>gi|161506893|ref|YP_001576847.1| preprotein translocase subunit SecY [Lactobacillus helveticus DPC
4571]
gi|260102375|ref|ZP_05752612.1| preprotein translocase [Lactobacillus helveticus DSM 20075]
gi|385813124|ref|YP_005849517.1| Preprotein translocase subunit secY [Lactobacillus helveticus H10]
gi|417013814|ref|ZP_11946724.1| preprotein translocase subunit SecY [Lactobacillus helveticus MTCC
5463]
gi|160347882|gb|ABX26556.1| Preprotein translocase, SecY subunit [Lactobacillus helveticus DPC
4571]
gi|260083819|gb|EEW67939.1| preprotein translocase [Lactobacillus helveticus DSM 20075]
gi|323465843|gb|ADX69530.1| Preprotein translocase subunit secY [Lactobacillus helveticus H10]
gi|328463384|gb|EGF35057.1| preprotein translocase subunit SecY [Lactobacillus helveticus MTCC
5463]
Length = 431
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 213/430 (49%), Gaps = 27/430 (6%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
S L NA F EIR +++ T +++I RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIYFTLFILLIYRIGANIAVPGINAKAITQVAQTGLVPMLDTV 59
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLTL 118
Query: 133 GFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ + +L S + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFVQSIGITLGFNALTQMGLVKSQTPQTYIEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 245
S+II GI+ L+++ + + +S RW F + ++ IVT V +
Sbjct: 179 VSVIIFAGIIARLPSGLWQIYKEGVINNSASDRWQGILFFIAIIVAILIVTQLVTWVEQA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASIL 304
R++ +QY + I+ E ++P +N SG+ PV+ + + P +IL +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIVTPATILMAFQ 289
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGAR 362
+ Q +++N S+ P V IY F + LF F + P+++A+ L K GA
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGV--IIYTFLIILFTFFYAFVQVNPEKLAENLQKQGAY 347
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP+V PGK T Y++K+ G + L ++A + ++ + +G TS+LI+
Sbjct: 348 IPSVWPGKDTQNYISKMLIKLSTVGSVFLGLVALLPQLATNFW-NLPSSIGLGGTSLLIV 406
Query: 423 VGSIIELRRS 432
+G ++EL R
Sbjct: 407 IGVVLELSRQ 416
>gi|359394359|ref|ZP_09187412.1| Preprotein translocase subunit secY [Halomonas boliviensis LC1]
gi|357971606|gb|EHJ94051.1| Preprotein translocase subunit secY [Halomonas boliviensis LC1]
Length = 437
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 130/427 (30%), Positives = 205/427 (48%), Gaps = 39/427 (9%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVDELGDF-----GA 78
SE+ RL + IV+ RIG IP+PG I D L+ F LG F GA
Sbjct: 9 SELWARLRFVLLAIVVYRIGAHIPVPG-----INPDQLAALFREQQGTILGMFNMFSGGA 63
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI+MQ++ + P L QL+KEG G KI Y + ++ A ++
Sbjct: 64 LERMSVLALGIMPYISASIIMQLMTAVSPHLEQLKKEGEAGRRKISQYTRYGTVILAFVQ 123
Query: 139 AVIVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
AV ++ I Y A S V F V GA+ M W+ + I+E G G G SL+I
Sbjct: 124 AVGMSVGLASQGIAYTADFSFFFTAVITF--VSGAVFMMWLGEQITEKGIGNGISLLIFA 181
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGF 256
GI+ G + + +L + W L L V I T+ VV E G R++K+ Y
Sbjct: 182 GIVAGLPSAVGQAF-ELARNEGAWNVLPLLALSVLGIATVAFVVFIERGQRRLKVNYPRR 240
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHV 312
++ + Y+P +N +G+ P + + +L FP+ + +G+ + Q
Sbjct: 241 QVGNKMYAGQ-----SSYLPLKVNMAGVIPAIFASSILLFPASIGQWVGAGEGMEWLQRA 295
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGK 370
+ L P +P +Y ++A V F F A + PK++AD L K GA +P ++PG+
Sbjct: 296 SQALGP-----GQP-LYILLFAAAVVFFCFFYTALVFNPKDVADNLKKSGAFLPGIRPGE 349
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIEL 429
T Y+ K+ +G L + T+ +++ +L N F G TS+LI+V I++
Sbjct: 350 QTARYIDKVMTRLTLFGALYI----TAVSLMPQFLIVAWNVPFFFGGTSLLIVVVVIMDF 405
Query: 430 RRSYQAY 436
Q++
Sbjct: 406 MAQVQSH 412
>gi|162286719|ref|YP_001086060.2| preprotein translocase subunit SecY [Acinetobacter baumannii ATCC
17978]
gi|169794614|ref|YP_001712407.1| preprotein translocase subunit SecY [Acinetobacter baumannii AYE]
gi|184159578|ref|YP_001847917.1| preprotein translocase subunit SecY [Acinetobacter baumannii ACICU]
gi|215482203|ref|YP_002324385.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
AB307-0294]
gi|239503214|ref|ZP_04662524.1| preprotein translocase subunit SecY [Acinetobacter baumannii AB900]
gi|260557047|ref|ZP_05829264.1| preprotein translocase, SecY subunit [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|301512039|ref|ZP_07237276.1| preprotein translocase subunit SecY [Acinetobacter baumannii AB058]
gi|384144687|ref|YP_005527397.1| preprotein translocase subunit SecY [Acinetobacter baumannii
MDR-ZJ06]
gi|403674562|ref|ZP_10936809.1| preprotein translocase subunit SecY [Acinetobacter sp. NCTC 10304]
gi|417544362|ref|ZP_12195448.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC032]
gi|417550363|ref|ZP_12201442.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-18]
gi|417555158|ref|ZP_12206227.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-81]
gi|417570375|ref|ZP_12221232.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC189]
gi|417871986|ref|ZP_12516898.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH1]
gi|417875092|ref|ZP_12519913.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH2]
gi|417880084|ref|ZP_12524621.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH3]
gi|417883006|ref|ZP_12527275.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH4]
gi|421455845|ref|ZP_15905189.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-123]
gi|421621595|ref|ZP_16062511.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC074]
gi|421624597|ref|ZP_16065465.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC098]
gi|421633298|ref|ZP_16073935.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-13]
gi|421641633|ref|ZP_16082164.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-235]
gi|421647964|ref|ZP_16088375.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-251]
gi|421649978|ref|ZP_16090360.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC0162]
gi|421659645|ref|ZP_16099861.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-83]
gi|421669072|ref|ZP_16109100.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC099]
gi|421673738|ref|ZP_16113675.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC065]
gi|421680337|ref|ZP_16120192.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC111]
gi|421685817|ref|ZP_16125583.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-143]
gi|421690311|ref|ZP_16129982.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-116]
gi|421698351|ref|ZP_16137893.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-58]
gi|421704838|ref|ZP_16144279.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ZWS1122]
gi|421708617|ref|ZP_16147990.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ZWS1219]
gi|421788997|ref|ZP_16225265.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-82]
gi|421809465|ref|ZP_16245300.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC035]
gi|425748461|ref|ZP_18866448.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-348]
gi|445444286|ref|ZP_21442930.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-A-92]
gi|445489908|ref|ZP_21458916.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
AA-014]
gi|169147541|emb|CAM85402.1| secretion protein [Acinetobacter baumannii AYE]
gi|183211172|gb|ACC58570.1| Preprotein translocase subunit SecY [Acinetobacter baumannii ACICU]
gi|213987239|gb|ACJ57538.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
AB307-0294]
gi|260409653|gb|EEX02954.1| preprotein translocase, SecY subunit [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|342223986|gb|EGT89059.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH1]
gi|342225881|gb|EGT90858.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH3]
gi|342226621|gb|EGT91583.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH2]
gi|342236751|gb|EGU01261.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH4]
gi|347595180|gb|AEP07901.1| preprotein translocase subunit SecY [Acinetobacter baumannii
MDR-ZJ06]
gi|395550823|gb|EJG16832.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC189]
gi|400212083|gb|EJO43045.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-123]
gi|400382250|gb|EJP40928.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC032]
gi|400386188|gb|EJP49262.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-18]
gi|400391575|gb|EJP58622.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-81]
gi|404564583|gb|EKA69762.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-116]
gi|404570844|gb|EKA75916.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-143]
gi|404572651|gb|EKA77693.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-58]
gi|407188931|gb|EKE60159.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ZWS1122]
gi|407189345|gb|EKE60571.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ZWS1219]
gi|408512377|gb|EKK14022.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC0162]
gi|408514385|gb|EKK15991.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-235]
gi|408516158|gb|EKK17737.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-251]
gi|408697504|gb|EKL43016.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC074]
gi|408701254|gb|EKL46693.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC098]
gi|408706758|gb|EKL52058.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-13]
gi|408706978|gb|EKL52272.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-83]
gi|410385956|gb|EKP38440.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC065]
gi|410389199|gb|EKP41614.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC099]
gi|410389706|gb|EKP42117.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC111]
gi|410399883|gb|EKP52064.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-82]
gi|410414362|gb|EKP66164.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC035]
gi|425491342|gb|EKU57627.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-348]
gi|444761931|gb|ELW86308.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-A-92]
gi|444766350|gb|ELW90625.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
AA-014]
gi|452946326|gb|EME51825.1| preprotein translocase subunit SecY [Acinetobacter baumannii
MSP4-16]
Length = 452
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 209/432 (48%), Gaps = 42/432 (9%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 23 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 78
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 138
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
AV + C L S + + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 AVGM-CAGLIGQGITLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 197
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 255
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 198 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 251
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP-------- 307
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIK 308
Query: 308 -FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
Q + +L+P +P +Y ++ + F F A + PKE+++ L + GA +P
Sbjct: 309 RSLQDLALVLSP-----GQP-LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVP 362
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG+ T YL I F G + ++++ IL F +G TS+LI+V
Sbjct: 363 GIRPGEQTARYLDHILNRLTFIGAIYITVICLMPMILQ---SSFGIPFYLGGTSLLIVVV 419
Query: 425 SIIELRRSYQAY 436
+++ QA+
Sbjct: 420 VVMDFMAQLQAH 431
>gi|88861474|ref|ZP_01136100.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Pseudoalteromonas
tunicata D2]
gi|88816522|gb|EAR26351.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Pseudoalteromonas
tunicata D2]
Length = 442
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 204/441 (46%), Gaps = 40/441 (9%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
+E++RRL I+I R+G F+P+PG D ++ ++ G++ E+ + GA +
Sbjct: 16 AELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLA-EFFEQQKGTIVEMFNMFSGGALERA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI+MQ+L HI P++++L+KEG G +KI Y + +L A ++++ +
Sbjct: 75 SVLALGIMPYISASIIMQLLTHIHPAMIELKKEGEQGRKKISQYTRYATLVLATVQSIGI 134
Query: 143 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A LP + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-GLPNMMQGLVVNPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWP------FMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY 253
L +GS+ ML ++ V + VV E G R++ + Y
Sbjct: 194 AN--------LPSAIGSTAEMARQGDLNVLMLLVIAVIVFAVTYLVVFFERGQRRIVVNY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---PFWQ 310
A + ++P +N +G+ P + + ++ FP +AS G P
Sbjct: 246 -----AKRQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPIAD 300
Query: 311 HVKEI---LNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVK 367
++ I L+P + A I+ F + +F+ P+E AD L K GA IP ++
Sbjct: 301 ALQTISLALSPGQPLYAMVLAAAIIFFCFFYTALVFN----PRETADNLKKSGAFIPGIR 356
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PG+ T +Y+ K+ G L ++ + + + F G TS+LIIV I+
Sbjct: 357 PGEQTSKYIDKVMTRLTLAGALYITFICLVPEFMTMAWQ---TPFYFGGTSILIIVVVIM 413
Query: 428 ELRRSYQAYNVMPSLSKALRR 448
+ Q + + L++
Sbjct: 414 DFMAQVQTHLMSHQYDSVLKK 434
>gi|339445892|ref|YP_004711896.1| preprotein translocase subunit SecY [Eggerthella sp. YY7918]
gi|338905644|dbj|BAK45495.1| preprotein translocase subunit SecY [Eggerthella sp. YY7918]
Length = 428
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 206/434 (47%), Gaps = 45/434 (10%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSF--VSGSVDE 72
+L++ ++F E+R+++ T ++ + R G ++P+PG + VS ++ +
Sbjct: 1 MLSSLIDAFKVPELRKKILFTLAILALYRFGAYVPVPGIPFNEFANQFTQSGGVSMTMLD 60
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
L GA S F LGI P I ASI+MQ++ ++P++ + KEG G KI +++L
Sbjct: 61 LFTGGALSNFSVFSLGIMPYITASIIMQLMQGVIPAIGRWAKEGETGRRKITQVTRYLTL 120
Query: 133 GFAILEAV-IVACYSLPYSIYAASHSVKHVM---VTAFLLVCGAMTMSWICDTISESGFG 188
G ++ A+ + + P S V ++ + F LV G + W+ + I++ G G
Sbjct: 121 GLGLINAIGYLLLFKSPAYGVVFSTEVPEILTDIIVVFTLVAGTAFIMWMGELITQRGVG 180
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-- 246
G SLII V I++ +Y ++Q + G+ +T+ V+V C
Sbjct: 181 NGMSLIIFVSIVSRVPSAIYSSITQSSADA-----------GMSIAITVLIVLVVLACIP 229
Query: 247 ---------RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
R++ + Y A + + YIP +N +G+ P++ + L+ FP
Sbjct: 230 AIIFVERAQRRIPVNY-----AKRVQGRKMMGGQSTYIPLKVNAAGVIPIIFASCLIYFP 284
Query: 298 SILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADY 355
+ LA++ + V + ++ WV + + + F F + + P E AD
Sbjct: 285 AQLAALFNVGWLTAVADAISSG-------WVNWILTVLLIVFFAYFYTSMVFNPDETADN 337
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSI 414
L K G IP V+PG AT++Y+ + GG+ ++++A TI+ ++ ++ + F
Sbjct: 338 LRKQGGFIPGVRPGSATVQYIKNVLHRVTLPGGIFIAVIAVVPTIIFYFTGNQLVQAF-- 395
Query: 415 GFTSVLIIVGSIIE 428
G TS+LI++G ++
Sbjct: 396 GGTSILIMIGVALD 409
>gi|403071289|ref|ZP_10912621.1| preprotein translocase subunit SecY [Oceanobacillus sp. Ndiop]
Length = 430
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 196/418 (46%), Gaps = 19/418 (4%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 85
++IRR++ T +++++ R+G FIP+P D+ I V G ++ G GA S F
Sbjct: 12 ADIRRKIIFTLLMLIVFRLGTFIPVPFTDKAAIDFMNQQNVFGFLNTFGG-GALQNFSIF 70
Query: 86 QLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILEAVIV 142
+GI P I ASI+MQ+L +VP + +K+G G +KI + I L F A+ V
Sbjct: 71 AMGIMPYITASIIMQLLQMDVVPKFTEWKKQGEMGRKKIAQVTRYGTIVLAFIQATAMSV 130
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
++ + V ++ A +L G + W+ + I+ G G G S++I GI+
Sbjct: 131 GFNAMAGGMLITDPGVMKFLIIAIVLTAGTAFLMWVGEQITAHGVGNGISILIFAGIVAA 190
Query: 203 YTETLYKMLSQLL---GSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFKL 258
+ ++ SQ G + ++ L+ + I + V+ V + RK+ +QY
Sbjct: 191 VPNGVGQLYSQYFVNPGDELFINIIIVLLIALVAIAVIVGVIFVNQALRKIPIQY----- 245
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILN 317
A SP+ ++P +N SG+ PV+ + P+ +A GS + +
Sbjct: 246 AKKLVNRSPVGGQSTHLPIKVNASGVIPVIFAIAFMIAPTTIAGFFEGSQIASTISYAFD 305
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
VG +Y + F + + + P+++A+ L K G IP ++PG T +YLT
Sbjct: 306 YTQPVGM--VIYVALIIAFTYFYTFVQVN--PEQMAENLQKQGGYIPGIRPGHNTEQYLT 361
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
++ F G + L+ +A IL L + IG TS+LI+VG ++ + ++
Sbjct: 362 RVLYRLTFVGAIFLAAVAVLPMILGS-LANLPTAVQIGGTSLLIVVGVALQTMKQLES 418
>gi|422871925|ref|ZP_16918418.1| preprotein translocase subunit SecY [Streptococcus sanguinis
SK1087]
gi|328945197|gb|EGG39351.1| preprotein translocase subunit SecY [Streptococcus sanguinis
SK1087]
Length = 435
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 219/440 (49%), Gaps = 50/440 (11%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 73
++F ++R ++ T +I++ RIG I +PG + + + + LS VSG+
Sbjct: 8 DAFKIKQVRSKILFTIFIILVFRIGTTITVPGINAKALSNLNDLPFLNMLSLVSGN---- 63
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
A S F LG+SP I ASI++Q+L ++P V+ K+G G K+ +I+L
Sbjct: 64 ----AMRNFSVFALGVSPYITASIVVQLLQMDLLPKFVEWGKQGEVGRRKLNQATRYIAL 119
Query: 133 GFAILEAV-IVACY-SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++A+ I A + +L + A+ +V+ + LL G+M ++W+ + I++ G+G G
Sbjct: 120 VLAFVQAIGITAGFDTLSRANLVANPNVQTYALICVLLATGSMIVTWLGEQITDKGYGNG 179
Query: 191 SSLIICVGILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 242
S+II GI++ Y + + S+ L SS + F+ L+ ++ + V
Sbjct: 180 VSMIIFAGIVSAIPDMIKGIYEDYFVNIPSERLTSS---FIFVGILIVAVLLIIYFTTFV 236
Query: 243 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL-- 300
+ K+ +QY K+A A S Y+P +NP+G+ PV+ + + A P+ +
Sbjct: 237 QQAEYKIPIQYT--KVAKGAPSSS-------YLPLKVNPAGVIPVIFASSITAAPAAIFQ 287
Query: 301 -ASILG-SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYL 356
AS +G W + L T++ +YAF + LF F + P++ A+ L
Sbjct: 288 VASAMGYDAEWVKTAQSLLATTTISGM-----FMYAFLIVLFTFFYTFVQINPEKTAENL 342
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K GA IP V+PGK T +Y++K+ G L L +++ I+ + + + ++G
Sbjct: 343 QKSGAYIPGVRPGKGTEDYMSKLLRRLATVGALFLGVISILP-IVAKDVFGLTDAVALGG 401
Query: 417 TSVLIIVGSIIELRRSYQAY 436
TS+LII+ + IE + + Y
Sbjct: 402 TSLLIIISTGIEGMKQLEGY 421
>gi|253827243|ref|ZP_04870128.1| preprotein translocase SecY [Helicobacter canadensis MIT 98-5491]
gi|313141446|ref|ZP_07803639.1| preprotein translocase subunit SecY [Helicobacter canadensis MIT
98-5491]
gi|253510649|gb|EES89308.1| preprotein translocase SecY [Helicobacter canadensis MIT 98-5491]
gi|313130477|gb|EFR48094.1| preprotein translocase subunit SecY [Helicobacter canadensis MIT
98-5491]
Length = 419
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 202/416 (48%), Gaps = 24/416 (5%)
Query: 28 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFF 85
I ++ +T ++ R+ ++P+PG D +I + + S ++ F A +LS
Sbjct: 5 IVNKILITLGFLLAYRVLAYVPVPGVDTSVIKTFFDNNASNALGLFNMFSGNAVERLSII 64
Query: 86 QLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA--VIVA 143
LGI P I ASI+M++L P+L +++KE DG +K I + ++ +++A V +
Sbjct: 65 SLGIMPYITASIIMELLAATFPNLGKMKKE-RDGMQKYMQIIRYTTVVITLIQAIGVSIG 123
Query: 144 CYSLPYSIYAASHSVKHVMV--TAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
SL A +V + +AF ++CG M + WI + I++ G G G SLII GI++
Sbjct: 124 LKSLGTGANGAIMIDMNVFIAISAFSMLCGTMLLMWIGEQITQRGIGNGISLIIFSGIVS 183
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 261
G + + L+ ++ W +L ++ + I + V G R++ + Y +
Sbjct: 184 GIPSAIAGTFN-LVNTNQISWLVLLFIMAIIIITVGCIIFVELGERRIPISYS--RKVVM 240
Query: 262 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETS 321
+D I YIP +N SG+ P + + +L FPS + + + + LNP
Sbjct: 241 QNQDKRIMN---YIPIKMNLSGVIPPIFASAILMFPSTILQSSSNTIIMQIADYLNPNG- 296
Query: 322 VGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKI 379
++Y + FV F F I PK+I++ L + G IP ++PG+ T +LT++
Sbjct: 297 -----YLYNVLMFLFVIFFAYFYASIVFNPKDISENLKRQGGFIPGIRPGEGTANFLTEV 351
Query: 380 QASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
WG L L+++AT +L ++ F G T+VLI+V ++ R +A
Sbjct: 352 ANRLTLWGALYLALIATLPWVL---VKASGVPFYFGGTAVLIVVQVAVDTMRKIEA 404
>gi|304438382|ref|ZP_07398323.1| preprotein translocase subunit SecY [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368748|gb|EFM22432.1| preprotein translocase subunit SecY [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 418
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 204/419 (48%), Gaps = 27/419 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E+R+++ T ++ + R+G IP+PG D I Q F G++ L D GA K S
Sbjct: 13 ELRQKIIFTLIMFAVFRMGTHIPVPGVDPTAIEQ---LFSQGTLFGLLDLFSGGAFSKFS 69
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F + I+P I A+I++Q+L +VP+L Q KEG +GH+K ++++ A +A+
Sbjct: 70 VFAMSITPYINAAIIIQLLNVVVPTLEQWSKEGAEGHKKTTKVTRYLTVVLAFFQAI--- 126
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
S+ + + ++++ A L G + + W+ + I+ +G G G SLII GI+
Sbjct: 127 GMSIGLKTAILNPNPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVAAL 186
Query: 204 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
+ + +L+ + ++ ++ F G++ + IV + + + G R++ + Y A
Sbjct: 187 PKNIGTILAYVKAGTISYFSVFAFGVIALAMIV--FVIHIETGFRRIPITY-----AKRV 239
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSV 322
T +IPF +N +G+ P++ + +L FP +A + P+ + L
Sbjct: 240 VGGRTATGHSSHIPFKVNQAGVIPIIFASSVLMFPITVAQFVDIPWVKTAASYLE----- 294
Query: 323 GARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQ 380
+P + T+Y + F F + +++AD L K G +P ++PG+AT +YL +
Sbjct: 295 WGKP-LQTTLYVLMIIFFTYFYTSVTVKIQDMADNLKKYGGFVPGLRPGQATADYLDYVL 353
Query: 381 ASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
G L+ +A ++ +G G T++LI+VG ++ + ++ VM
Sbjct: 354 TRITLAGAFFLAFIAVLPNLIAEATHI--QGVYFGGTALLIVVGVALQTMKQIESMVVM 410
>gi|227512884|ref|ZP_03942933.1| preprotein translocase subunit SecY [Lactobacillus buchneri ATCC
11577]
gi|227083884|gb|EEI19196.1| preprotein translocase subunit SecY [Lactobacillus buchneri ATCC
11577]
Length = 439
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 213/441 (48%), Gaps = 42/441 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ +F EIR ++ T +++I R+G FI +PG + + + SG V L
Sbjct: 1 MLSTLTGAFKVKEIRNKILFTLFVLIIFRLGSFITVPGVNAKALTSVA---SSGLVSILN 57
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
F G S F +G+SP I A I++Q+L IVP V+ K+G G K+ + +++
Sbjct: 58 TFSGGGLTNYSIFAMGVSPYITAQIIIQLLQMDIVPKYVEWGKQGEVGRRKLNQHTRYLT 117
Query: 132 LGFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+ A ++V I A ++ S+ ++ SVK +V +L G M +W+ D I+E G G
Sbjct: 118 VVLAFFQSVGITAGFNQLSSLNLVTNPSVKTFIVIGIILTGGTMLTTWMGDMITERGIGN 177
Query: 190 GSSLIICVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGL------LGVFTIVTMWA 239
G S+II GI+ TG + + GS + W P + + L + T VT W
Sbjct: 178 GISMIIFAGIIARIPTGLQSLWQQYFVGVTGSDL-WQPILFSIALVIIVLAIITFVT-W- 234
Query: 240 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-S 298
V + R++ +QY A DS Y+P +N +G+ PV+ + +A P +
Sbjct: 235 --VQQAERRIPIQY---TRRVAGSPDS------SYLPLKVNVAGVIPVIFASSFIATPQT 283
Query: 299 ILASILG----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIAD 354
IL + + ++Q + + N +T+ GA +YTI F F N P+++++
Sbjct: 284 ILMAFTNNYSTTTWYQVLNNVFNMQTTTGA---AFYTILIVMFTFFYAFVQVN-PEKLSE 339
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 414
L K G+ IP V PG T Y++ + G + L ++A + + + ++E +
Sbjct: 340 NLQKQGSYIPGVWPGHETQSYVSNLLMRLSTVGAIFLGVVALIPLVAQN-IWNLDESIGL 398
Query: 415 GFTSVLIIVGSIIELRRSYQA 435
G TS+LI+VG IE R +
Sbjct: 399 GGTSLLIVVGVAIETIRQIRG 419
>gi|114778804|ref|ZP_01453611.1| SecY protein [Mariprofundus ferrooxydans PV-1]
gi|114550935|gb|EAU53499.1| SecY protein [Mariprofundus ferrooxydans PV-1]
Length = 446
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 200/416 (48%), Gaps = 41/416 (9%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E++ R+ T ++++ RIG IP+PG D ++ Q + S GS+ + D GA +L+
Sbjct: 20 ELKSRILFTLGMLIVYRIGAHIPVPGIDAGVLAQ-FFSQAKGSLLGMFDMFSGGALSRLT 78
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I A+I++Q++ + P L QL+KEG G KI Y + ++G AI +A+ ++
Sbjct: 79 IFALGIMPYISAAIIIQLMTVVSPKLEQLKKEGESGRRKITEYTRYGTVGLAIFQAIGIS 138
Query: 144 CYSLPYSIYAASHSVKHVM----VTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
+S+ S + M +T LV G + + W+ + ++E G G G SLII GI
Sbjct: 139 IGLESFSVGGQSVVIDPGMAFRAMTVITLVTGTIFLMWVGEQVTERGIGNGISLIIFGGI 198
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPF-MLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
+ G + L L + + F +LGL + VT V R++ +QY ++
Sbjct: 199 VAGLPHAVGSTLE--LARTGEFSAFTVLGLFAMSLAVTGAVVWFERAQRRIPIQYAKRQV 256
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA----SILGSPFWQHVKE 314
+ ++P +N +G+ P + + L+ P+ A + G + +
Sbjct: 257 GNRMYGGK-----ASFLPLKVNTAGVIPPIFASSLILLPATFAQFTKGVDGFAWLGDLSA 311
Query: 315 ILNPETSVGARPWVYYTIYA----FFVFLFN--IFDIANLPKEIADYLNKMGARIPNVKP 368
L+P W+Y ++ FF F + +FD PK+ AD L K G IP ++P
Sbjct: 312 ALSPGA------WLYMALFTGLIVFFCFFYTAIVFD----PKDTADNLKKHGGFIPGIRP 361
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIV 423
G+ T +Y+ + G +S++ +L +L ++ F G TS+LI+V
Sbjct: 362 GQKTADYVDSVLTRITVVGAAYVSMVC----LLPQWLISELSVPFYFGGTSLLIVV 413
>gi|372278290|ref|ZP_09514326.1| preprotein translocase subunit SecY [Oceanicola sp. S124]
Length = 454
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 200/423 (47%), Gaps = 32/423 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAE 79
+E+R+R+ T L++I R+G +IP+PG D + + F+ G+ +G GA
Sbjct: 21 TELRKRILFTIGLLIICRLGTYIPVPGIDGAALRE----FMEGAGQGIGGMLSMFTGGAL 76
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
++ F LGI P I ASI++Q++ +VP+L QL+KEG G +KI Y + ++ A L+A
Sbjct: 77 GRMGIFALGIMPYISASIIVQLMTAMVPALEQLKKEGEQGRKKINQYTRYGTVLLATLQA 136
Query: 140 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
+A SL A+ + + LV G M M W+ + I+ G G G SLII VGI
Sbjct: 137 YGLAV-SLEAGDLASDPGLFFRLEAVITLVGGTMFMMWLGEQITARGVGNGISLIIFVGI 195
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKL 258
+ L + + G S P ++ + V I + VV E RK+ +QY ++
Sbjct: 196 IAEVPAALAQFFAS--GRSGAISPAVIIGVIVMVIAVIAFVVFMERALRKIHIQYPRRQV 253
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---PFWQHVKEI 315
+ ++P +NP+G+ P + + LL P+ +A+ GS P +
Sbjct: 254 GMKVYDGG-----SSHLPIKVNPAGVIPAIFASSLLLLPTTIATFSGSDTGPVMSTILAY 308
Query: 316 LNPETSVGARPWVYYTIYAFFVFL--FNIFDIANLPKEIADYLNKMGARIPNVKPGKATI 373
P +P A VF F ++A +++AD L +P ++PGK T
Sbjct: 309 FGP-----GQPLYLLFFVAMIVFFAYFYTHNVAFKTEDVADNLKNQNGFVPGIRPGKKTA 363
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
E+L + G L+++ IL + + + F G TSVLI+V ++ +
Sbjct: 364 EFLEYVVNRVLVLGAGYLALVCIMPEILRN---QFSVPFYFGGTSVLIVVSVTMDTIQQV 420
Query: 434 QAY 436
Q++
Sbjct: 421 QSH 423
>gi|312793920|ref|YP_004026843.1| preprotein translocase, secy subunit [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181060|gb|ADQ41230.1| preprotein translocase, SecY subunit [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 435
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 209/448 (46%), Gaps = 68/448 (15%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
++RR++ T +I++ R+G FIP+P DR D L+ V + LG F G
Sbjct: 13 DLRRKILFTLFMILVFRLGAFIPVPYIDR-----DALAKVINDLTMLGFFDVVAGGTFKN 67
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV- 140
+S F + ++P I +SI+MQ+L +P+L +L K+G +G +K+ W G AIL +
Sbjct: 68 MSIFAMSVTPYINSSIIMQLLTIAIPALEELAKQGEEGRKKLAE---WTRYGTAILAFIQ 124
Query: 141 IVACY-----------SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
V Y +P I A + L G + + WI + I+E+G G
Sbjct: 125 AVGIYFGLKNATGLTGGVPV-ITAQGQGFLGFITITITLTAGTVFLMWIGEQITENGIGN 183
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGL--------LGVFTIVTM---- 237
G SL+I GI+ S++ V W ++ L +GV + M
Sbjct: 184 GISLLIFAGII-----------SRIPNGVVSLWNYVAKLNEFSLTSIIGVILFIVMALAI 232
Query: 238 --WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLA 295
+ +V+ EG R++ +QY A +IP +N +G+ P++ L+
Sbjct: 233 IVFIIVIQEGERRIPVQY-----AKRVVGRRVYGGQSTHIPIKVNIAGVIPIIFAISLVM 287
Query: 296 FPSILASIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEI 352
P+ +A S F++ VK + + W Y YA F+ F F A + P EI
Sbjct: 288 LPTTIAQFFPNSGFYKFVKAYFSSGSF-----W-YTFFYALFIIGFTYFYTAIVFNPVEI 341
Query: 353 ADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILD-HYLRRINEG 411
A+ L G IP ++PGK T++++T++ + F G L L+ +A T++ + ++N
Sbjct: 342 ANNLKNNGGFIPGIRPGKPTVDFITRVLSKVTFAGALFLAFIAILPTLVGIMFKHQLNIY 401
Query: 412 FSIGFTSVLIIVGSIIELRRSYQAYNVM 439
F G TS+LI+VG +E R +A +M
Sbjct: 402 F--GGTSLLIVVGVALETIRQMEAQMLM 427
>gi|332853159|ref|ZP_08434596.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6013150]
gi|332868595|ref|ZP_08438251.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6013113]
gi|332876063|ref|ZP_08443847.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6014059]
gi|384133268|ref|YP_005515880.1| Secretion protein [Acinetobacter baumannii 1656-2]
gi|417577578|ref|ZP_12228423.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-17]
gi|421629012|ref|ZP_16069762.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC180]
gi|421654738|ref|ZP_16095065.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-72]
gi|421661190|ref|ZP_16101367.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC110]
gi|421665765|ref|ZP_16105871.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC087]
gi|421695650|ref|ZP_16135255.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-692]
gi|421796547|ref|ZP_16232607.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-21]
gi|421803922|ref|ZP_16239834.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-A-694]
gi|425753957|ref|ZP_18871824.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-113]
gi|445398174|ref|ZP_21429545.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-57]
gi|445456188|ref|ZP_21445722.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC047]
gi|445463833|ref|ZP_21449368.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC338]
gi|445478654|ref|ZP_21454777.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-78]
gi|322509488|gb|ADX04942.1| Secretion protein [Acinetobacter baumannii 1656-2]
gi|332728828|gb|EGJ60187.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6013150]
gi|332733272|gb|EGJ64466.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6013113]
gi|332735681|gb|EGJ66724.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6014059]
gi|395570799|gb|EJG31461.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-17]
gi|404565168|gb|EKA70338.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-692]
gi|408510509|gb|EKK12171.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-72]
gi|408703871|gb|EKL49251.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC180]
gi|408716039|gb|EKL61160.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC110]
gi|410389499|gb|EKP41911.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC087]
gi|410398796|gb|EKP51002.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-21]
gi|410412388|gb|EKP64247.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-A-694]
gi|425497350|gb|EKU63456.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-113]
gi|444774727|gb|ELW98803.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-78]
gi|444778719|gb|ELX02729.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC047]
gi|444780182|gb|ELX04148.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC338]
gi|444783933|gb|ELX07770.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-57]
Length = 440
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 209/432 (48%), Gaps = 42/432 (9%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 11 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 66
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 67 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 126
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
AV + C L S + + LV G M + W+ + I+E G G G S+II G
Sbjct: 127 AVGM-CAGLIGQGITLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 185
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 255
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 186 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 239
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP-------- 307
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 240 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIK 296
Query: 308 -FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
Q + +L+P +P +Y ++ + F F A + PKE+++ L + GA +P
Sbjct: 297 RSLQDLALVLSP-----GQP-LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVP 350
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG+ T YL I F G + ++++ IL F +G TS+LI+V
Sbjct: 351 GIRPGEQTARYLDHILNRLTFIGAIYITVICLMPMILQ---SSFGIPFYLGGTSLLIVVV 407
Query: 425 SIIELRRSYQAY 436
+++ QA+
Sbjct: 408 VVMDFMAQLQAH 419
>gi|260770933|ref|ZP_05879862.1| preprotein translocase SecY subunit [Vibrio furnissii CIP 102972]
gi|375129807|ref|YP_004991905.1| preprotein translocase subunit SecY [Vibrio furnissii NCTC 11218]
gi|260614170|gb|EEX39360.1| preprotein translocase SecY subunit [Vibrio furnissii CIP 102972]
gi|315178979|gb|ADT85893.1| preprotein translocase subunit SecY [Vibrio furnissii NCTC 11218]
Length = 444
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 205/437 (46%), Gaps = 31/437 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++ RL +++ R G F+P+PG D ++ D G++ E+ + GA +
Sbjct: 17 SELKSRLLFVVGALLVFRAGSFVPIPGIDAAVLA-DLFEQQKGTIIEMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A +A+ +
Sbjct: 76 SIFALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A LP + + ++ LV G M + W+ + I+E G G G SL+I GI+
Sbjct: 136 AT-GLPNMVDNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISLLIFAGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + + + Q + +L + F ++ + V + G R++ + Y A
Sbjct: 195 AGLPKAIGQTIEQARQGELHVLLLLLIAVVAFAVI-YFVVFMERGQRRIVVNY-----AK 248
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-----SPF-W-QHVK 313
+ ++P IN +G+ P + + ++ FP LA G S F W V
Sbjct: 249 RQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVS 308
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
L+P +P +Y +YA + F F A + P+E AD L K GA +P ++PG+
Sbjct: 309 LALSP-----GQP-LYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQ 362
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +Y+ K+ G L ++ + I + + N F G TS+LI+V I++
Sbjct: 363 TAKYIDKVMTRLTLAGALYITFIC---LIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMA 419
Query: 432 SYQAYNVMPSLSKALRR 448
Q + + L++
Sbjct: 420 QVQTHMMSNQYESVLKK 436
>gi|319952176|ref|YP_004163443.1| protein translocase subunit secy/sec61 alpha [Cellulophaga algicola
DSM 14237]
gi|319420836|gb|ADV47945.1| protein translocase subunit secY/sec61 alpha [Cellulophaga algicola
DSM 14237]
Length = 446
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 207/427 (48%), Gaps = 30/427 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
E++ R+ VT L+++ R G I LPG D + +G L F GA K S
Sbjct: 15 EELKGRILVTLGLLLVYRFGAQIALPGIDTTQLGALTSGTENGIFGILNAFTGGAFAKAS 74
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA---- 139
F LGI P I ASI++Q++ +P L +L+KEG G + I W+++G IL+A
Sbjct: 75 VFALGIMPYISASIVVQLMGIAIPYLQKLQKEGESGRKTINQITRWLTIGICILQAPTYL 134
Query: 140 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
+ ++ + +P S + + ++ +LV G + W+ + I++ G G G SL+I VGI
Sbjct: 135 LGLSQFGVPDSAFVLGKGLDFMIPAVIILVTGTVFAMWLGEKITDRGIGNGISLLIMVGI 194
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMW------AVVVTEGCRKVKLQY 253
+ TL + +Q ++ W G + V V +W +V++ R++ +QY
Sbjct: 195 IA----TLPQAFAQ---EAISRWEGTGGPMLVLIEVIIWFVVILLSVLLVMATRQIPVQY 247
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
+ +D+ T YIP +N SG+ P++ ++ P ++ + W
Sbjct: 248 ARRSASGGYEKDAMGT--RQYIPLKLNASGVMPIIFAQAIMFAPGLIGKTFNNTVWGAWM 305
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIA-NLP-KEIADYLNKMGARIPNVKPGKA 371
E+ + A Y ++AF + +F F A +P ++AD L + G IP ++PG
Sbjct: 306 EVQFQDIFGLA----YNLLFAFLIIVFTYFYTAITVPTNKMADDLKRSGGFIPGIRPGAE 361
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI--GFTSVLIIVGSIIEL 429
T ++L KI + G + L++LA I+ L + G+++ G TS+LI+VG I+
Sbjct: 362 TGDFLDKIMSLITLPGSIFLALLAVLPAIVVK-LMDVQPGWAMFYGGTSLLIMVGVAIDT 420
Query: 430 RRSYQAY 436
+ +Y
Sbjct: 421 VQQVNSY 427
>gi|409202235|ref|ZP_11230438.1| preprotein translocase subunit SecY [Pseudoalteromonas flavipulchra
JG1]
Length = 442
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 198/434 (45%), Gaps = 26/434 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
+E++RRL I+I R+G F+P+PG D ++ ++ G++ E+ + GA +
Sbjct: 16 AELKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLA-EFFEQQKGTIVEMFNMFSGGALERA 74
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI+MQ+L HI P++++L+KEG G +KI Y + +L A +++ +
Sbjct: 75 SVLALGIMPYISASIIMQLLTHIHPAMIELKKEGEQGRKKISQYTRYGTLVLATFQSIGI 134
Query: 143 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A LP + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 135 AT-GLPNMMEGLVVNPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIV 193
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
+ + +L + VF VT V G R++ + Y A
Sbjct: 194 ANLPSAIGSTAEMARQGDLHILALLLIAVIVFA-VTYLVVFFERGQRRIVVNY-----AK 247
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQHVKE 314
+ ++P +N +G+ P + + ++ FP +AS G + Q +
Sbjct: 248 RQQGRQVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVADVLQAISA 307
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
+L P + A I+ F + +F+ P+E AD L K GA IP ++PG+ T +
Sbjct: 308 VLTPGQPLYAMVLAAAIIFFCFFYTALVFN----PRETADNLKKSGAFIPGIRPGEQTSK 363
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ K+ G L ++ + + + F G TS+LIIV I++ Q
Sbjct: 364 YIDKVMTRLTLAGALYITFICLVPEFMTMAWQ---TPFYFGGTSILIIVVVIMDFMAQVQ 420
Query: 435 AYNVMPSLSKALRR 448
+ + L++
Sbjct: 421 THMMSHQYDSVLKK 434
>gi|312140898|ref|YP_004008234.1| preprotein translocase secy [Rhodococcus equi 103S]
gi|325675464|ref|ZP_08155148.1| preprotein translocase subunit SecY [Rhodococcus equi ATCC 33707]
gi|311890237|emb|CBH49555.1| preprotein translocase SecY [Rhodococcus equi 103S]
gi|325553435|gb|EGD23113.1| preprotein translocase subunit SecY [Rhodococcus equi ATCC 33707]
Length = 440
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 200/421 (47%), Gaps = 41/421 (9%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSG--SVDELGDFGAEL 80
++RR++ T L+ + R+G +P PG D R I Q +G S+ L GA L
Sbjct: 13 DLRRKILFTLGLVALYRLGATLPSPGVDYGNVRACIDQVSGGESAGIYSLINLFSGGALL 72
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+LS F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+ AIL++
Sbjct: 73 QLSVFAIGIMPYITASIIVQLLTVVIPKFEELRKEGQSGQAKMTQYTRYLSIALAILQST 132
Query: 141 -IVACYSLPYSIYA------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
IVA + + A SV +++ ++ GA + W + I+E G G G SL
Sbjct: 133 GIVALAARGQLLQGCSQPIIADESVFGLIIIVLVMTAGAALVMWFGELITERGVGNGMSL 192
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
+I GI + +L G + F L + I+ V V +G R++ +QY
Sbjct: 193 LIFAGIASRIPSEGKAILDSRGGLT-----FALVCVAALAIIA-GVVFVEQGQRRIPVQY 246
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-----PF 308
+ S Y+P +N +G+ PV+ + LL P+++A + G+ P
Sbjct: 247 AKRMVGRRMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLIAQLTGANTSTDPS 301
Query: 309 W--QHVKE-ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARI 363
W + + E ++NP A P VY IY + F F +A P+E AD + K G I
Sbjct: 302 WWQRFINEYLVNP-----ANP-VYILIYFGMIVFFTYFYVAITFNPEERADEMKKFGGFI 355
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI-LDHYLRRINEGFSIGFTSVLII 422
P ++PG+ T +YL + + G + L +A + LD + G T+VLI+
Sbjct: 356 PGIRPGRPTADYLNYVLSRITLPGAIYLGTIAVLPNLFLDIGNSGGVQNLPFGGTAVLIM 415
Query: 423 V 423
V
Sbjct: 416 V 416
>gi|451340333|ref|ZP_21910830.1| Preprotein translocase secY subunit protein [Amycolatopsis azurea
DSM 43854]
gi|449416889|gb|EMD22591.1| Preprotein translocase secY subunit protein [Amycolatopsis azurea
DSM 43854]
Length = 473
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 209/454 (46%), Gaps = 45/454 (9%)
Query: 11 RLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV 70
+S VL+ + ++R+++ T ++ + RIG IP PG + + + V
Sbjct: 35 EVSRVLSAFRSALATPDLRKKILFTLAIVAVYRIGATIPAPGISYSAVQKCTETGSQEGV 94
Query: 71 DELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYI 127
+L + GA L+LS F GI P I ASI++Q+L ++P +L+KEG G K+ Y
Sbjct: 95 YQLLNLFSGGALLQLSLFSTGIMPYITASIIVQLLTVVIPRFEELKKEGQSGQGKLTQYT 154
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICD 180
++++ A+L+A V + ++ +SV + + + G M W+ +
Sbjct: 155 RYLTIALAVLQATGVVALADRKQLFPQCDTAIIPDNSVYTLAIIVITMTAGTAVMMWLGE 214
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I+E G G G S++I + I +LS G + L+ VF +V + +V
Sbjct: 215 LITERGVGNGMSVLIFLNIAARIPIEGGNILSSAGG-------VVFALICVFGLVIIASV 267
Query: 241 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
+ V +G R++ +QY + + Y+P +N +G+ PV+ + LL P +
Sbjct: 268 IFVEQGQRRIPVQYAKRMIGRRMYGGT-----STYLPIKVNQAGVIPVIFASSLLYLPDL 322
Query: 300 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYL 356
++ ++G ++ V W + +Y + F F I N+ E A+ +
Sbjct: 323 ISRLVGDANSNAGWQVFIQNYIVNQSSWAHVLLYFALIIFFTYFYITITFNV-DERAEEM 381
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-----NEG 411
K G IP ++PG+ T EYL+ + G L L I+A IL ++ + N+
Sbjct: 382 KKFGGFIPGIRPGRPTAEYLSYVLGRITLPGSLYLGIIA----ILPNFFLSVTGSGNNQN 437
Query: 412 FSIGFTSVLIIVGSIIE---------LRRSYQAY 436
F G T+VLI+VG ++ ++R+Y+ +
Sbjct: 438 FPFGGTAVLIMVGVGLDTVKQIESQLMQRNYEGF 471
>gi|387122504|ref|YP_006288386.1| preprotein translocase subunit SecY [Acinetobacter baumannii
MDR-TJ]
gi|407934163|ref|YP_006849806.1| preprotein translocase subunit SecY [Acinetobacter baumannii
TYTH-1]
gi|421204427|ref|ZP_15661553.1| preprotein translocase subunit SecY [Acinetobacter baumannii AC12]
gi|421535345|ref|ZP_15981606.1| preprotein translocase subunit SecY [Acinetobacter baumannii AC30]
gi|424050879|ref|ZP_17788415.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab11111]
gi|424058576|ref|ZP_17796073.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab33333]
gi|424062046|ref|ZP_17799533.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab44444]
gi|193078465|gb|ABO13458.2| secretion protein [Acinetobacter baumannii ATCC 17978]
gi|385876996|gb|AFI94091.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
MDR-TJ]
gi|398326108|gb|EJN42260.1| preprotein translocase subunit SecY [Acinetobacter baumannii AC12]
gi|404665818|gb|EKB33780.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab33333]
gi|404669632|gb|EKB37525.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab11111]
gi|404674458|gb|EKB42206.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab44444]
gi|407902744|gb|AFU39575.1| preprotein translocase subunit SecY [Acinetobacter baumannii
TYTH-1]
gi|409986708|gb|EKO42900.1| preprotein translocase subunit SecY [Acinetobacter baumannii AC30]
Length = 450
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 209/432 (48%), Gaps = 42/432 (9%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 21 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 76
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 77 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 136
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
AV + C L S + + LV G M + W+ + I+E G G G S+II G
Sbjct: 137 AVGM-CAGLIGQGITLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 195
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 255
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 196 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 249
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP-------- 307
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 250 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIK 306
Query: 308 -FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
Q + +L+P +P +Y ++ + F F A + PKE+++ L + GA +P
Sbjct: 307 RSLQDLALVLSP-----GQP-LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVP 360
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG+ T YL I F G + ++++ IL F +G TS+LI+V
Sbjct: 361 GIRPGEQTARYLDHILNRLTFIGAIYITVICLMPMILQ---SSFGIPFYLGGTSLLIVVV 417
Query: 425 SIIELRRSYQAY 436
+++ QA+
Sbjct: 418 VVMDFMAQLQAH 429
>gi|117924175|ref|YP_864792.1| protein translocase subunit secY/sec61 alpha [Magnetococcus marinus
MC-1]
gi|117607931|gb|ABK43386.1| protein translocase subunit secY/sec61 alpha [Magnetococcus marinus
MC-1]
Length = 442
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 202/426 (47%), Gaps = 38/426 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL-GDF-----GAEL 80
E+R+R+ T ++++ RIG +P PG D PQ +F L G F GA
Sbjct: 21 ELRKRILFTLGMLIVYRIGAHVPTPGID----PQALATFFEQQQGSLLGMFNMFSGGALS 76
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+L+ F LGI P I ASI++Q++ + P L ++KEG G KI Y + ++ A+ +
Sbjct: 77 RLTVFALGIMPYISASIIIQLMTAVFPKLEAIKKEGEAGRRKITQYTRYGTIVLALFQGF 136
Query: 141 IVACYSLPYSIYAASHSV------KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
+A Y L S+ A +V + ++T L G + W+ + I++ G G G SLI
Sbjct: 137 GIA-YGLE-SMKAGGLNVVIEPGMEFRLMTVLTLTAGTAFLMWVGEQITDRGIGNGISLI 194
Query: 195 ICVGILTGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
I GI+ L+ L L + P + L L+ + +VT + + + R++ +QY
Sbjct: 195 IFSGIVANLPVALFNTLQ--LARTGDLAPLLVLFLIAMAIVVTAFIIFMERAQRRITIQY 252
Query: 254 YGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 310
A R+ S V ++P +N +G+ P + + ++ FP +A+ + W+
Sbjct: 253 -------AKRQVSGRRMVGGESSHLPLKVNTAGVIPPIFASSIILFPVTIANFMP---WE 302
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGK 370
KE S G ++ + A F F I P+E AD L K G IP ++PGK
Sbjct: 303 GFKE-FAAMFSPGQLGYMVFYSAAILFFCFFYTAIVFNPEETADNLRKYGGFIPGIRPGK 361
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 430
T +YL KI + G + ++ + IL + + N F G TS+LI+VG ++
Sbjct: 362 RTSDYLDKILSRLTLVGAIYVTAVCLLPEIL---IAQYNVPFYFGGTSMLIVVGVTMDTT 418
Query: 431 RSYQAY 436
Q++
Sbjct: 419 AQIQSF 424
>gi|406994586|gb|EKE13567.1| hypothetical protein ACD_13C00010G0053 [uncultured bacterium]
Length = 426
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 197/415 (47%), Gaps = 16/415 (3%)
Query: 28 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQL 87
IR++L +T +++V+ R+ IP G DR + +L S+ ++ G S L
Sbjct: 18 IRKKLIITGIILVVFRLAAHIPAAGIDRDTLSALFLGSPLLSLLDVFSGGTLANFSILAL 77
Query: 88 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 147
G++P I ASI+ Q+L ++VPS+ +L+KEG G EKI Y +++ A ++A +
Sbjct: 78 GLNPYINASIIFQLLGYVVPSIAELQKEGEYGQEKINQYTRLVTIPLAAVQAFGMYALLK 137
Query: 148 PYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETL 207
+I + + + G + W+ + I+E GF G S++I VGI+ L
Sbjct: 138 GQNIITGLSPI-DLFSLVITMTAGTVFAVWLGELITEYGFKNGVSILIFVGIIARLPVIL 196
Query: 208 YKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSP 267
+ S + M+ V ++ V V E R++ + Y A R
Sbjct: 197 SQSASIFQSQDIFK---MIIFFAVLVLIVGLVVFVGEATRQIPIHY-------AKRRTES 246
Query: 268 ITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP-ETSVGARP 326
Y+P +N +G+ P++ L+ PS++ L + + I T+ +
Sbjct: 247 GLAASSYLPIRLNQAGVIPIIFAVSLVLIPSMIGQFLSNASNIQIAGIARTMSTAFSPQS 306
Query: 327 WVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTR 384
+Y +Y F VF F F A + P++I++ L K G IP ++PGK T +YL+ I +
Sbjct: 307 VLYNVVYFFLVFGFTYFYTAVVFNPEKISEDLQKGGGFIPGIRPGKETEKYLSHILSRIT 366
Query: 385 FWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
GG L ++A ++ +++ N +IG TS+LI+V ++E+ R + VM
Sbjct: 367 VVGGAFLGLIAVLPSLFQNFVGASN--MAIGGTSILIVVSVVLEIVREIEGELVM 419
>gi|229917338|ref|YP_002885984.1| preprotein translocase subunit SecY [Exiguobacterium sp. AT1b]
gi|229468767|gb|ACQ70539.1| preprotein translocase, SecY subunit [Exiguobacterium sp. AT1b]
Length = 429
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 200/421 (47%), Gaps = 26/421 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV-DELGDFG--AELKL 82
+IR+R+ T +I+I RIG IP+P ++ D L F SG + D L FG A
Sbjct: 12 KDIRQRILFTLAIIIIFRIGAHIPVP-----MVNTDVLRFDSGGLLDFLNLFGGNALQNF 66
Query: 83 SFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILEA 139
S F +GI P I ASI++Q+L +VP + K+G G +K+ + + I LGF +
Sbjct: 67 SLFAMGIMPYITASIVVQLLQMDVVPKFAEWAKQGEAGRKKLATVTRYGTIILGFVQATS 126
Query: 140 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
+ L + + V A +L G + ++ + +E G G G S+II GI
Sbjct: 127 LSFGFNRLYPGLVNETWGTATYFVIAIVLTAGTAFLMFLGEMTTEKGVGNGISIIIFAGI 186
Query: 200 LTGYTE---TLYKMLSQLLGSSVRWWPFMLGLLG-VFTIVTMWAVVVTEGCRKVKLQYYG 255
+ G+ +Y+ Q G ++ L +L V VT+ + V + RK+ +QY
Sbjct: 187 VAGFPRIFTQIYETKLQNAGDALFINIVYLVVLALVILAVTVGIIYVQQAARKIPIQY-- 244
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP-FWQHVKE 314
A +P+ ++P +N +G+ PV+ + P +AS + SP Q ++
Sbjct: 245 ---AKRTANRTPVGGQSTHLPIKLNAAGVIPVIFAISFMVTPPTVASFIASPETTQKLQT 301
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
+ +G +Y + F + + + P+++A+ L K G IP ++PG T +
Sbjct: 302 YFDTTAPIGMS--IYVALIIAFAYFYTFIQVN--PEQMAENLQKQGGYIPGIRPGAQTEQ 357
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+TK+ F+G + LS++A TI L + IG TS+LI++G +E + +
Sbjct: 358 YITKLLYRLTFFGAIFLSLVAIMPTIFIK-LAGLPTSVQIGGTSLLIVIGVALETMKQIE 416
Query: 435 A 435
+
Sbjct: 417 S 417
>gi|403388258|ref|ZP_10930315.1| preprotein translocase subunit SecY [Clostridium sp. JC122]
Length = 423
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 204/416 (49%), Gaps = 16/416 (3%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 86
E+R+R+ T ++VI R+G FIP+PG D + S + ++ GA K S F
Sbjct: 13 ELRKRMLFTLFIVVIFRLGIFIPVPGVDASKLASLSSSGTLFTFYDMLSGGALSKFSIFA 72
Query: 87 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 146
+G++P I ASI++Q+L VP+L QL KEG +G +KI++Y ++ FA+ + +A Y
Sbjct: 73 MGVTPYINASIVIQLLTIAVPTLEQLSKEGQEGRQKIQNYTRLAAVVFAVFQG--IAMYM 130
Query: 147 LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTET 206
L S + + + G+ + W+ + I G G G S+II V I++ T
Sbjct: 131 LINGTL-KSTGYMELFIIVLTMTAGSSLLVWLGEQIQVYGIGSGVSVIIFVNIISTIPTT 189
Query: 207 LYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDS 266
+YK+ V ++ + V ++ + +++ R+V +QY G + + +
Sbjct: 190 IYKVAGLRQAGEVSLVEVII-FVLVALVLLLAVIIINLAERRVPVQYAGKAVGNKVFKGQ 248
Query: 267 PITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSPFWQHVKEILNPETSVGAR 325
+IPF++N +G+ ++ ++ FP +A I S F + + E +P + +
Sbjct: 249 -----STHIPFSLNSAGVMAIIFAMSVMQFPETIAKIWPTSAFAKFIME--SPWSIFKSG 301
Query: 326 PWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQAST 383
Y Y + F+ F + P E+A+ +NK +P ++PGK T +L +
Sbjct: 302 SLKYIITYLVLILFFSWFYTIVTFKPDEMAENMNKSSGFVPGIRPGKPTEVFLESVLTKV 361
Query: 384 RFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
GG+ SI+A +++ Y +G + G TS+LIIVG ++ + ++ VM
Sbjct: 362 SIMGGVFASIIAIFPIVVEAYSNF--KGIAFGGTSLLIIVGVALDTMKQLESQLVM 415
>gi|422510186|ref|ZP_16586334.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL059PA1]
gi|313816548|gb|EFS54262.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL059PA1]
Length = 439
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 206/449 (45%), Gaps = 51/449 (11%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ A +F ++RR++ T ++ + R+G IP+P + I SGS L
Sbjct: 1 MLSAFANAFRTPDLRRKILFTLFILAVFRLGSVIPVPNVNVTNINTCVTQASSGSSAGLY 60
Query: 75 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
GA LKL+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SMISLFSGGALLKLAIFALGIMPYITASIILQLLTVVIPKLETLKKEGASGQNKITQYTR 120
Query: 129 WISLGFAILEAVIVACYSLPYSIYAA------SHSVKHVMVTAFLLVCGAMTMSWICDTI 182
+++L +L+A + ++ S SV V+V + G + W+ + I
Sbjct: 121 YLTLVLGLLQATAFVTLATSGRLFTCSLPVVYSTSVFEVVVMILTMTAGTTIVMWMGELI 180
Query: 183 SESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
++ G G G S++I I + ++L+ K+ G + W F+ ++ + M AV
Sbjct: 181 TDRGIGNGMSIMIFTQIAARFPDSLWSIKVARNGAGQAHAW--FIFSMVIAIGLAVMAAV 238
Query: 241 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V + +G R++ QY + S YIP +N SG+ PV+ + +L P +
Sbjct: 239 VFIEQGQRRIPGQYAKRMVGRRMFGGS-----TTYIPLKVNQSGVIPVIFASSILYLPVL 293
Query: 300 LASILGSPFWQHVKEILNPETSVGARPWV--YYT-----IYAFFVFLFNIF------DIA 346
A+ P+TS A W+ Y+T +Y FL IF I
Sbjct: 294 YAT-------------FRPQTS--AAKWIGHYFTRGDHPVYNIAYFLLIIFFCYFYVAIT 338
Query: 347 NLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR 406
P E++D + K G IP ++ GK T +YL + + G L L +++ T+ L
Sbjct: 339 FDPVEMSDNMKKYGGFIPGIRAGKPTEDYLAYVLSRLTAPGSLYLGLISMIPTLAFVSLH 398
Query: 407 RINEGFSIGFTSVLIIVGSIIELRRSYQA 435
N+ F G TS+LIIVG ++ + ++
Sbjct: 399 A-NQNFPFGGTSILIIVGVALDTVKQVES 426
>gi|337283095|ref|YP_004622566.1| preprotein translocase subunit SecY [Streptococcus parasanguinis
ATCC 15912]
gi|387878676|ref|YP_006308979.1| preprotein translocase subunit SecY1 [Streptococcus parasanguinis
FW213]
gi|419800167|ref|ZP_14325466.1| preprotein translocase, SecY subunit [Streptococcus parasanguinis
F0449]
gi|335370688|gb|AEH56638.1| preprotein translocase subunit SecY [Streptococcus parasanguinis
ATCC 15912]
gi|385696020|gb|EIG26543.1| preprotein translocase, SecY subunit [Streptococcus parasanguinis
F0449]
gi|386792133|gb|AFJ25168.1| preprotein translocase subunit SecY1 [Streptococcus parasanguinis
FW213]
Length = 436
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 213/438 (48%), Gaps = 46/438 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 73
++F ++R ++ T +I++ RIG I +PG + +++ + LS VSG+
Sbjct: 8 DAFKVKQVRSKILFTIFIILVFRIGTTITVPGVNAKILNNLQDVSFLNMLSLVSGN---- 63
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
A S F LG+SP I ASI++Q+L ++P V+ K+G G K+ +ISL
Sbjct: 64 ----AMRNFSVFALGVSPYITASIVVQLLQMDLLPKFVEWGKQGEVGRRKLNQATRYISL 119
Query: 133 GFAILEAVIVAC--YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ + ++L + A+ + K ++ +L G+M ++W+ + I++ G+G G
Sbjct: 120 VLAFVQSIGITATFHTLSQAKLVATPNAKTYLLIGAILTTGSMIVTWLGEQITDKGYGNG 179
Query: 191 SSLIICVGILTGYTETLYKMLSQLL-----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
S+II GI++ E + ++ G F+ L+ ++ + V +
Sbjct: 180 VSMIIFAGIVSSIPEMIKEIYENAFVNVRSGQMTNSLIFVGVLILAVMVIVYFTTFVEQA 239
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
K+ +QY K+A A S Y+P +NP+G+ PV+ + + A P+ + ++
Sbjct: 240 QYKIPVQYT--KIAQGAPSSS-------YLPLKVNPAGVIPVIFASSITAAPAAIFQVIS 290
Query: 306 SPFW-----QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNK 358
+ + + + +L T G +YA + LF F + P++ A+ L K
Sbjct: 291 AMGYNAGWVKTAQAMLATNTPTGV------AMYALLIILFTFFYTFVQINPEKTAENLQK 344
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
GA IP V+PGK T E+++++ G + L + T IL L + + ++G TS
Sbjct: 345 SGAYIPGVRPGKGTEEFMSRLLRRLASVGSVFLGFI-TIIPILARDLFGLTDAVALGGTS 403
Query: 419 VLIIVGSIIELRRSYQAY 436
+LII+ + IE + + Y
Sbjct: 404 LLIIISTGIEGMKQLEGY 421
>gi|226953891|ref|ZP_03824355.1| preprotein translocase subunit SecY [Acinetobacter sp. ATCC 27244]
gi|226835374|gb|EEH67757.1| preprotein translocase subunit SecY [Acinetobacter sp. ATCC 27244]
Length = 440
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 206/428 (48%), Gaps = 34/428 (7%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR +F+ L+V R+G IPLPG D + F + LG F GA
Sbjct: 11 YREIIRRLMFLIGALLVF-RLGAHIPLPGIDSVALAS---FFKANEGTFLGLFNMFSGGA 66
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ +VPSL L+KEG G K+ Y + +L A+++
Sbjct: 67 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKLNQYTRYGTLFLALVQ 126
Query: 139 AVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ + + I S +V VT+ LV G M + W+ + I+E G G G S+II
Sbjct: 127 GIGMCAGLISQGITLTSGLAFYVPAVTS--LVAGTMFLMWLGEQITERGVGNGISMIIFA 184
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGC-RKVKLQYY 254
GI+ G L ++ Q S ++GL G+ ++ + A+V E R++ + Y
Sbjct: 185 GIVAG----LPNLVIQSFTSVQNGQGSLIGLAVFGLLSLAVLAAIVFIEKAQRRIPVNY- 239
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS--PFWQHV 312
A + T + ++P IN +G+ P + + LL FP+ L LGS P V
Sbjct: 240 ----AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGFV 295
Query: 313 KEILNPETSV--GARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKP 368
K L V +P +Y ++ + F F A + PKE+++ L + GA +P ++P
Sbjct: 296 KRSLQDLALVLSPGQP-LYLMLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRP 354
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G+ T YL I F G + ++++ +L F +G TS+LI+V +++
Sbjct: 355 GEQTARYLDHILNRLTFIGAIYITVVCLMPMVLQ---SSFGIPFHLGGTSLLIVVVVVMD 411
Query: 429 LRRSYQAY 436
QA+
Sbjct: 412 FMAQLQAH 419
>gi|342214831|ref|ZP_08707502.1| preprotein translocase, SecY subunit [Veillonella sp. oral taxon
780 str. F0422]
gi|341590362|gb|EGS33605.1| preprotein translocase, SecY subunit [Veillonella sp. oral taxon
780 str. F0422]
Length = 420
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 213/434 (49%), Gaps = 50/434 (11%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
+E+R ++ T ++ ++ R+G IP+PG + +I F SG++ L D GA K
Sbjct: 12 TELRNKVVYTLLMFIVFRLGIHIPVPGVEASVIES---LFTSGNLFGLLDLFAGGALSKF 68
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILEAV 140
S F + I+P I ASI+MQ+L +VP+ K+G +G +KI + + LGF
Sbjct: 69 SIFAMSITPYINASIIMQLLGAVVPTFEAWSKDGEEGRKKIAKVTRYGTVILGF------ 122
Query: 141 IVACYSLPYSIYAAS----HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
+ + + Y++ A++ +S V++ + +L G + W+ + I+ G G G SLII
Sbjct: 123 -IQAFGMTYALRASNALIDNSFMSVILISIILTAGTCFLMWVGEQITAHGIGNGISLIIF 181
Query: 197 VGILTGY---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
GI+ + +T+Y+ L +G+ + + ++ V IV + A VT+G R++ +QY
Sbjct: 182 AGIVARFPDGVQTIYQYLQ--VGTINVFQAILFAIIAVAMIVLVIA--VTQGQRRIPIQY 237
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
A ++P +N +G+ P++ + +L FP+ LA + P+ Q V
Sbjct: 238 -----AKRVVGRKMYGGHSTFLPLKVNQAGVIPIIFASSILMFPATLAQFVQVPWVQTVA 292
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATI 373
T + + +Y + FF + + I N+ ++AD + K G IP ++PGK T
Sbjct: 293 SYFQWGTPI--QTILYAVLILFFTYFYTAISI-NI-TDMADNMKKHGGFIPGIRPGKPTA 348
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGFTSVLIIVGSIIE--- 428
+Y+ ++ G L+ +A IL + + + +G G T++LI+VG ++
Sbjct: 349 DYVDRVMTRITLVGAFFLAFVA----ILPNMIGGLTGIQGVYFGGTALLIVVGVALDTMQ 404
Query: 429 ------LRRSYQAY 436
L R Y+ +
Sbjct: 405 QVESLVLTRQYKGF 418
>gi|205372050|ref|ZP_03224867.1| preprotein translocase subunit SecY [Bacillus coahuilensis m4-4]
Length = 430
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 197/419 (47%), Gaps = 21/419 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFF 85
+IR ++ T +++V+ R+G FIP+PG D ++ + G ++ G GA S F
Sbjct: 12 GDIRNKIIFTLLMLVVFRLGTFIPVPGVDADVLKLADQPGILGFLNTFGG-GALSNFSIF 70
Query: 86 QLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILEAVIV 142
+GI P I ASI++Q+L +VP + K+G G K+ + + I LGF A+
Sbjct: 71 AMGIMPYITASIIVQLLQMDVVPKFTEWSKQGEVGRRKLAQFTRYFTIVLGFIQALAMSY 130
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
+ + + + +V A +L G + W+ + I+ G G G S++I GI+
Sbjct: 131 GFNQFYGGVLITNPGIGNYLVIALVLTAGTAFLMWLGEQITAKGVGNGISILIFAGIVAA 190
Query: 203 YTETLYKMLSQLLGSS-----VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
++ +Q + + +R L +L + IV + + V + RK+ +QY
Sbjct: 191 IPGGAVQLYAQQIEGAGEQLFIRIVILALIVLAILAIV-VGVIFVQQALRKIPIQY---- 245
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-PFWQHVKEIL 316
A SP+ ++P +N +G+ PV+ + P +AS +GS + I
Sbjct: 246 -AKRMMNRSPVGGQSTHLPLKVNAAGVIPVIFAVSFIITPQTIASFVGSNSVTDTITYIF 304
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
+ VG +Y + F + + + P++ A+ L G IP ++PG+AT EYL
Sbjct: 305 DYTQPVGM--LIYVALIIAFTYFYAFIQVN--PEQAAENLKNQGGYIPGIRPGQATQEYL 360
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
T++ F G + LS+++ + + + + IG TS+LI+VG +E + +A
Sbjct: 361 TRVLYRLTFVGAVFLSVVSVLPILFIKF-AGLPQSLQIGGTSLLIVVGVALETMKQLEA 418
>gi|85713162|ref|ZP_01044194.1| Preprotein translocase subunit SecY [Idiomarina baltica OS145]
gi|85693032|gb|EAQ30998.1| Preprotein translocase subunit SecY [Idiomarina baltica OS145]
Length = 442
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 197/435 (45%), Gaps = 28/435 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
SE++RRL I++ R G F+P+PG D ++ Q + V F GA + S
Sbjct: 16 SELKRRLLFVLGAIIVFRAGSFVPIPGIDAAVLAQLFSQQKDTIVAMFNMFSGGALERAS 75
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI+MQ+ + P L +L+KEG G KI Y W +L A +++ +A
Sbjct: 76 VFALGIMPYISASIIMQLATVVHPRLAELKKEGEAGRRKISQYTRWGTLILATFQSIGIA 135
Query: 144 CYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
LP + + LV G M + W+ + I+E G G G S++I VGI+
Sbjct: 136 T-GLPNLMPGLVIDPGFQFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISILIFVGIVA 194
Query: 202 GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASA 261
G + + Q + +L + + VT + V V G R++ + Y A
Sbjct: 195 GLPSAIGQTAEQARQGDLNILLLLL-IGVIVLAVTYFVVFVERGQRRIVVNY-----AKR 248
Query: 262 AREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS------PFWQHVKEI 315
+ ++P +N +G+ P + + ++ FP +A+ GS Q +
Sbjct: 249 QQGRKVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIATWFGSGDGVVADVLQQISMT 308
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
L+P +P +Y +YA + F F A + P+E AD L K GA IP ++PG+ T
Sbjct: 309 LSP-----GQP-LYVLLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTS 362
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
Y+ K+ G L ++ + + + + N F G TS+LIIV I++
Sbjct: 363 RYIDKVMTRLTLAGALYITFVC---LVPEFMMIAWNVQFYFGGTSLLIIVVVIMDFMAQV 419
Query: 434 QAYNVMPSLSKALRR 448
Q + + L++
Sbjct: 420 QTHMMSHQYDSVLKK 434
>gi|376298196|ref|YP_005169426.1| preprotein translocase subunit SecY [Desulfovibrio desulfuricans
ND132]
gi|323460758|gb|EGB16623.1| preprotein translocase, SecY subunit [Desulfovibrio desulfuricans
ND132]
Length = 436
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 198/425 (46%), Gaps = 31/425 (7%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG--SVDELGDFGAELKLSF 84
E+R++L T L+ + R+G IP+PG D + + + + V ++ G ++S
Sbjct: 12 ELRKKLLWTFALLAVYRLGIHIPIPGVDSAALSEFFAQAQNTLFGVFDMFSGGGLKRMSI 71
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWW------ISLGFAIL 137
F LGI P I ASI++Q+L + P L +L+KE G G +KI Y + + GFAI
Sbjct: 72 FALGIMPYISASIILQLLTVVSPELKRLQKEEGEAGRKKITQYTRYGTVLITVVQGFAIA 131
Query: 138 EAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+ + + P +Y+ + ++T L G + + W+ + ++E G G G SLII
Sbjct: 132 TGLESMSSPTGAPMVLYSG---ISFKLMTILTLTAGTVFLMWLGEQMTEKGIGNGISLII 188
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
GI+ G + L + + + +L L+ V + V + G R++ + Y
Sbjct: 189 YAGIIAGLPAAVINTLQLMTVGEISLF-ILLFLIVAMVAVLAFIVFMERGQRRIPIHY-- 245
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 315
A + ++P IN +G+ P + + +L FP+ LA + + Q
Sbjct: 246 ---AKRQQGRRMFGGQTTHLPLKINTAGVIPPIFASSILMFPATLAQFSNNKYLQDFSSY 302
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFN--IFDIANLPKEIADYLNKMGARIPNVKPGKATI 373
P++ + +Y I FF + + +FD PK IA+ + K G IP ++PG T
Sbjct: 303 FRPDSIL--YNILYIGIIIFFCYFYTAIMFD----PKGIAENIQKQGGFIPGIRPGNRTR 356
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
EY+ K+ A WG +S + +L + + F G TS+LI+VG ++
Sbjct: 357 EYIDKVLARITLWGAFYVSAVCVLPMVL---ISKFGVPFYFGGTSLLIVVGVAMDFMGQI 413
Query: 434 QAYNV 438
++Y +
Sbjct: 414 ESYMI 418
>gi|227509951|ref|ZP_03940000.1| preprotein translocase subunit SecY [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227523012|ref|ZP_03953061.1| preprotein translocase subunit SecY [Lactobacillus hilgardii ATCC
8290]
gi|227089830|gb|EEI25142.1| preprotein translocase subunit SecY [Lactobacillus hilgardii ATCC
8290]
gi|227190557|gb|EEI70624.1| preprotein translocase subunit SecY [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 439
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 213/441 (48%), Gaps = 42/441 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ +F EIR ++ T +++I R+G FI +PG + + + SG V L
Sbjct: 1 MLSTLTGAFKVKEIRNKILFTLFVLIIFRLGSFITVPGVNAKALTSVA---SSGLVSILN 57
Query: 75 DF--GAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
F G S F +G+SP I A I++Q+L IVP V+ K+G G K+ + +++
Sbjct: 58 TFSGGGLTNYSIFAMGVSPYITAQIIIQLLQMDIVPKYVEWGKQGEVGRRKLNQHTRYLT 117
Query: 132 LGFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+ A ++V I A ++ S+ ++ SVK +V +L G M +W+ D I+E G G
Sbjct: 118 VVLAFFQSVGITAGFNQLSSLNLVTNPSVKTFIVIGIILTGGTMLTTWMGDMITERGIGN 177
Query: 190 GSSLIICVGIL----TGYTETLYKMLSQLLGSSVRWWPFMLGL------LGVFTIVTMWA 239
G S+II GI+ TG + + GS + W P + + L + T VT W
Sbjct: 178 GISMIIFAGIIARIPTGLQSLWQQYFVGVTGSDL-WQPILFSIALVIIVLAIITFVT-W- 234
Query: 240 VVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-S 298
V + R++ +QY A DS Y+P +N +G+ PV+ + +A P +
Sbjct: 235 --VQQAERRIPIQY---TRRVAGSPDS------SYLPLKVNVAGVIPVIFASSFIATPQT 283
Query: 299 ILASILG----SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIAD 354
IL + + ++Q + + N +T+ GA +YTI F F N P+++++
Sbjct: 284 ILMAFTNNYSTTTWYQVLNNVFNMQTTTGA---AFYTILIVMFTFFYAFVQVN-PEKLSE 339
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 414
L K G+ IP V PG T Y++ + G + L ++A + + + ++E +
Sbjct: 340 NLQKQGSYIPGVWPGHETQSYVSNLLMRLSTVGAIFLGVVALIPLVAQN-IWNLDESIGL 398
Query: 415 GFTSVLIIVGSIIELRRSYQA 435
G TS+LI+VG IE R +
Sbjct: 399 GGTSLLIVVGVAIETIRQIRG 419
>gi|403514333|ref|YP_006655153.1| preprotein translocase subunit SecY [Lactobacillus helveticus
R0052]
gi|403079771|gb|AFR21349.1| preprotein translocase subunit SecY [Lactobacillus helveticus
R0052]
Length = 431
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 213/430 (49%), Gaps = 27/430 (6%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
S L NA F EIR +++ T +++I RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIYFTLFILLIYRIGANIAVPGINAKAITQVAQTGLVPMLDTV 59
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLTL 118
Query: 133 GFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ + +L S + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFVQSIGITLGFNALTQMGLVKSQTPQTYIEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 245
S+II GI+ L+++ + + +S RW F + ++ IVT V +
Sbjct: 179 VSVIIFAGIIARLPSGLWQIYKEGVINNSASDRWQGILFFIAIIVAILIVTQLVTWVEQA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASIL 304
R++ +QY + I+ E ++P +N SG+ PV+ + + P +IL +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIVTPATILMAFQ 289
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGAR 362
+ Q +++N S+ P V IY F + LF F + P+++A+ L K GA
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGV--IIYTFLIILFTFFYAFVQVNPEKLAENLQKQGAY 347
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP++ PGK T Y++K+ G + L ++A + ++ + +G TS+LI+
Sbjct: 348 IPSIWPGKDTQNYISKMLIKLSTVGSVFLGLVALLPQLATNFW-NLPSSIGLGGTSLLIV 406
Query: 423 VGSIIELRRS 432
+G ++EL R
Sbjct: 407 IGVVLELSRQ 416
>gi|385239007|ref|YP_005800346.1| preprotein translocase subunit SecY [Acinetobacter baumannii
TCDC-AB0715]
gi|416146878|ref|ZP_11601425.1| preprotein translocase subunit SecY [Acinetobacter baumannii AB210]
gi|417562989|ref|ZP_12213868.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC137]
gi|417565703|ref|ZP_12216577.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC143]
gi|421199981|ref|ZP_15657142.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC109]
gi|421790954|ref|ZP_16227142.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-2]
gi|323519508|gb|ADX93889.1| preprotein translocase subunit SecY [Acinetobacter baumannii
TCDC-AB0715]
gi|333365834|gb|EGK47848.1| preprotein translocase subunit SecY [Acinetobacter baumannii AB210]
gi|395525571|gb|EJG13660.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC137]
gi|395557459|gb|EJG23460.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC143]
gi|395564978|gb|EJG26629.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC109]
gi|410403832|gb|EKP55906.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-2]
Length = 439
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 209/432 (48%), Gaps = 42/432 (9%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 10 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 65
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 66 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 125
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
AV + C L S + + LV G M + W+ + I+E G G G S+II G
Sbjct: 126 AVGM-CAGLIGQGITLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 184
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 255
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 185 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 238
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP-------- 307
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 239 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIK 295
Query: 308 -FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
Q + +L+P +P +Y ++ + F F A + PKE+++ L + GA +P
Sbjct: 296 RSLQDLALVLSP-----GQP-LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVP 349
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG+ T YL I F G + ++++ IL F +G TS+LI+V
Sbjct: 350 GIRPGEQTARYLDHILNRLTFIGAIYITVICLMPMILQ---SSFGIPFYLGGTSLLIVVV 406
Query: 425 SIIELRRSYQAY 436
+++ QA+
Sbjct: 407 VVMDFMAQLQAH 418
>gi|422550160|ref|ZP_16625959.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL050PA1]
gi|314917678|gb|EFS81509.1| preprotein translocase, SecY subunit [Propionibacterium acnes
HL050PA1]
Length = 439
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 203/438 (46%), Gaps = 29/438 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L+ A +F ++RR++ T ++ + R+G IP+P + I SGS L
Sbjct: 1 MLSAFANAFRTPDLRRKILFTLFILAVFRLGSVIPVPNVNVTNINTCVTQASSGSSAGLY 60
Query: 75 DF------GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
GA LKL+ F LGI P I ASI++Q+L ++P L L+KEG G KI Y
Sbjct: 61 SMISLFSGGALLKLAIFALGIMPYITASIILQLLTVVIPKLETLKKEGASGQNKITQYTR 120
Query: 129 WISLGFAILEAVIVACYSLPYSIYAA------SHSVKHVMVTAFLLVCGAMTMSWICDTI 182
+++L +L+A + ++ S SV V+V + G + W+ + I
Sbjct: 121 YLTLVLGLLQATAFVTLATSGRLFTCSLPVVYSTSVFEVVVMILTMTAGTTIVMWMGELI 180
Query: 183 SESGFGQGSSLIICVGILTGYTETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
++ G G G S++I I + ++L+ K+ G + W F+ ++ + M AV
Sbjct: 181 TDRGIGNGMSIMIFTQIAARFPDSLWSIKVARNGAGQAHAW--FIFSMVIAIGLAVMAAV 238
Query: 241 V-VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 299
V + +G R++ +QY + S YIP +N SG+ PV+ + +L P +
Sbjct: 239 VFIEQGQRRIPVQYAKRMVGRRMFGGS-----TTYIPLKVNQSGVIPVIFASSILYLPVL 293
Query: 300 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLN 357
A+ + + + G P VY Y + F F +A P E++D +
Sbjct: 294 YATF---RLQTSAAKWIGHYFTRGDHP-VYNIAYFLLIIFFCYFYVAITFDPVEMSDNMK 349
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++ GK T +YL + + G L L +++ T+ L N+ F G T
Sbjct: 350 KYGGFIPGIRAGKPTEDYLAYVLSRLTAPGSLYLGLISMIPTLAFVSLHA-NQNFPFGGT 408
Query: 418 SVLIIVGSIIELRRSYQA 435
S+LIIVG ++ + ++
Sbjct: 409 SILIIVGVALDTVKQVES 426
>gi|294651614|ref|ZP_06728918.1| preprotein translocase subunit SecY [Acinetobacter haemolyticus
ATCC 19194]
gi|292822463|gb|EFF81362.1| preprotein translocase subunit SecY [Acinetobacter haemolyticus
ATCC 19194]
Length = 452
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 206/428 (48%), Gaps = 34/428 (7%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR +F+ L+V R+G IPLPG D + F + LG F GA
Sbjct: 23 YREIIRRLMFLIGALLVF-RLGAHIPLPGIDSVALAS---FFKANEGTFLGLFNMFSGGA 78
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ +VPSL L+KEG G K+ Y + +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVVPSLEALKKEGEQGKRKLNQYTRYGTLFLALVQ 138
Query: 139 AVIVACYSLPYSIYAASHSVKHV-MVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ + + I S +V VT+ LV G M + W+ + I+E G G G S+II
Sbjct: 139 GIGMCAGLISQGITLTSGLAFYVPAVTS--LVAGTMFLMWLGEQITERGVGNGISMIIFA 196
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGL--LGVFTIVTMWAVVVTEGC-RKVKLQYY 254
GI+ G L ++ Q S ++GL G+ ++ + A+V E R++ + Y
Sbjct: 197 GIVAG----LPNLVIQSFTSVQNGQGSLIGLAVFGLLSLAVLAAIVFIEKAQRRIPVNY- 251
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS--PFWQHV 312
A + T + ++P IN +G+ P + + LL FP+ L LGS P V
Sbjct: 252 ----AQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGFV 307
Query: 313 KEILNPETSV--GARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKP 368
K L V +P +Y ++ + F F A + PKE+++ L + GA +P ++P
Sbjct: 308 KRSLQDLALVLSPGQP-LYLMLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRP 366
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G+ T YL I F G + ++++ +L F +G TS+LI+V +++
Sbjct: 367 GEQTARYLDHILNRLTFIGAIYITVVCLMPMVLQ---SSFGIPFHLGGTSLLIVVVVVMD 423
Query: 429 LRRSYQAY 436
QA+
Sbjct: 424 FMAQLQAH 431
>gi|78186089|ref|YP_374132.1| preprotein translocase subunit SecY [Chlorobium luteolum DSM 273]
gi|78165991|gb|ABB23089.1| protein translocase subunit secY/sec61 alpha [Chlorobium luteolum
DSM 273]
Length = 443
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 209/436 (47%), Gaps = 48/436 (11%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
E+R+R+ T +L+ I R+G I +PG D + S + D G F GA +
Sbjct: 15 ELRQRILYTLLLLFIYRLGSHITIPGVDASAVAGASSSHAN---DLFGLFDLFVGGAFAR 71
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
S F LGI P I ASI++Q+L + P +L++EG +G +KI ++ A L+A
Sbjct: 72 ASIFSLGIMPYISASIIIQLLGAVTPYFQKLQQEGEEGRQKINQMTRLGTIFIAALQAWG 131
Query: 142 VACYSLPYSIYAASHSVK------HVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
V+ S + HSV + +L + + W+ + I+E G G G SLII
Sbjct: 132 VSVSLSSPSSFG--HSVVPDPGFFFSLSAVIILTASTVFVMWLGERITEQGIGNGISLII 189
Query: 196 CVGILTGYTETL---YKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
+GIL G+ +L Y+ LS LGS + W + +L + + + V++T G R+V +Q
Sbjct: 190 MIGILAGFPASLVNEYRSLS--LGS--KNWIIEIIILAMMVAIVAFVVLLTVGTRRVPVQ 245
Query: 253 Y----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-GSP 307
+ G K+ + YIP IN +G+ P++ ++ PS S S
Sbjct: 246 HAKRVVGRKVYGGGTQ---------YIPMRINTAGVMPIIFAQSIMFLPSTFLSFFPDSE 296
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPN 365
Q V I ++ W Y ++ + F F IA PKE+AD + + G IP
Sbjct: 297 AMQSVASIFAYDS------WWYALMFGTMIVFFTYFYTAIAFNPKEVADTMRRQGGFIPG 350
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFS--IGFTSVLIIV 423
V+PGK+T +++ I G + L+++A T L + + GF+ G TS+LIIV
Sbjct: 351 VRPGKSTADFIDNILTRITLPGAVSLALIAVLPTFLTKF-ANVTPGFAQFFGGTSLLIIV 409
Query: 424 GSIIELRRSYQAYNVM 439
G ++ + +++ +M
Sbjct: 410 GVGLDTLQQVESHLLM 425
>gi|172040034|ref|YP_001799748.1| preprotein translocase subunit SecY [Corynebacterium urealyticum
DSM 7109]
gi|171851338|emb|CAQ04314.1| preprotein translocase SecY subunit [Corynebacterium urealyticum
DSM 7109]
Length = 471
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 203/433 (46%), Gaps = 50/433 (11%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS----VDELGDFG 77
+F ++R+++ T +I++ RIG IP PG D I + S + L G
Sbjct: 34 AFKNVDLRKKILFTLAMIILYRIGSQIPTPGVDYANITKQISELTESSAVYSLINLFSGG 93
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
A L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y ++++ A+L
Sbjct: 94 ALLQLSIFAIGIMPYITASIIVQLLTVVIPKFEQLKKEGQTGQAKMTEYTRYLTVALALL 153
Query: 138 E-AVIVACYSLPYSIYAASHSVKH------VMVTAFLLVCGAMTMSWICDTISESGFGQG 190
+ A IVA + +K ++V ++ GA+ + W+ + I++ G G G
Sbjct: 154 QSAGIVALADREQLLGQGIPVLKDEVGIFGLIVMVLIMTSGAVLVMWLGELITDRGVGNG 213
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLG--LLGVFTIVTMWAVVVTEGCRK 248
SL+I GI T +LS G F+ G + G+ ++ + V V +G R+
Sbjct: 214 MSLLIMAGIATTLPGEGVSILSNSGG-------FIFGAVVFGMLLLI-VGVVFVEQGQRR 265
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-- 306
+ +QY K R+ E Y+P +N +G+ PV+ + LL P ++ I+ S
Sbjct: 266 IPVQYA--KRMIGRRQYG---ETSTYLPLKVNQAGVIPVIFASSLLTVPILITQIIQSGA 320
Query: 307 --------PFW-QHVKEIL-NPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIAD 354
+W ++V +L NP W Y +Y + F+ F + P + AD
Sbjct: 321 AAGEDVANNWWNRNVMTVLQNPAA------WQYILVYLALIIFFSFFYVSVQYDPYDQAD 374
Query: 355 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINE---- 410
+ K G IP ++PG+ T EYL + G L L I+A IL + ++
Sbjct: 375 NMKKYGGFIPGIRPGRPTAEYLGYVMNRLLVVGSLYLGIIAVLPNILINLGVDTSQASGG 434
Query: 411 GFSIGFTSVLIIV 423
G G T+VLI+V
Sbjct: 435 GMPFGGTAVLILV 447
>gi|221133736|ref|ZP_03560041.1| preprotein translocase subunit SecY [Glaciecola sp. HTCC2999]
Length = 439
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 203/436 (46%), Gaps = 32/436 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE+R RLF I++ R+G ++P+PG D ++ Q + G++ E+ + GA +
Sbjct: 15 SELRSRLFFVLGAIIVFRLGSYVPIPGIDAAVLSQLFEQ-QKGTIVEMFNMFSGGALERA 73
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q+L + P +++L+KEG G KI Y +++L A +++ V
Sbjct: 74 SVLALGIMPYITASIIIQLLTAVHPPMMELKKEGEAGRRKISQYTRYLTLVLATFQSIGV 133
Query: 143 ACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A LP I + LV G M + W+ + I+E G G G S++I GI+
Sbjct: 134 AT-GLPNLISGLVINPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIV 192
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + Q + +L + + +T V V R++ + Y A
Sbjct: 193 AGLPTAIGQTAEQARQGEINLLFLLL-IAAIVIGLTYLVVFVERAQRRIVVNY-----AK 246
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG----SPFWQHVKEIL 316
+ + ++P +N +G+ P + + ++ FPS +A G + + Q V +L
Sbjct: 247 RQQGRKVMQAQSSHLPLKVNMAGVIPPIFASSIILFPSTIAGWFGQNEATSWLQDVALLL 306
Query: 317 NPETSVGARPWVYYTIYA----FFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+P +P +Y +YA FF F + P+E AD L K GA +P ++PG+ T
Sbjct: 307 SP-----GQP-LYVGLYAAAIIFFCFFYTALTFN--PRETADNLKKSGAFVPGIRPGEQT 358
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
YL K+ G L ++ + + + L N F G TS+LIIV I++
Sbjct: 359 SRYLDKVMTRLTLAGALYITFVC---LVPEFLLLTWNVPFYFGGTSLLIIVVVIMDFMAQ 415
Query: 433 YQAYNVMPSLSKALRR 448
Q + + L++
Sbjct: 416 VQTHLMSSQYESVLKK 431
>gi|345850530|ref|ZP_08803525.1| preprotein translocase subunit SecY [Streptomyces zinciresistens
K42]
gi|345638011|gb|EGX59523.1| preprotein translocase subunit SecY [Streptomyces zinciresistens
K42]
Length = 438
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 211/433 (48%), Gaps = 29/433 (6%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDF- 76
A +F ++R++L T +IV+ R+G +P+PG D R + D + G + F
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVVYRVGTHVPIPGVDYRAVQVCVDQANANQGIFGLVNMFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ A
Sbjct: 66 GGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYLTVALA 125
Query: 136 ILEAVIVACYSLPYSIY----AASHSV--KHVMVTAFLLV---CGAMTMSWICDTISESG 186
IL+ + + S++ AA V + + VT +++ G + W+ + I++ G
Sbjct: 126 ILQGTGLVATARSGSLFQNCPAAGQIVPDRSIFVTITMVITMTAGTALVMWLGELITDRG 185
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G S+++ + I + +L+ + +Q G+ W ++ V + V V +
Sbjct: 186 IGNGMSILMFISIAATFPSSLWAIKTQ--GNLAGGWIEFATVIAVGLFMVGLVVFVEQAQ 243
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R+V +QY + + + YIP +N +G+ PV+ + LL P+++ S
Sbjct: 244 RRVPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIVQFSNS 298
Query: 307 P--FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGAR 362
W K + +P V + + ++ F ++ F+ P+E+AD + K G
Sbjct: 299 AESGWAKWITKNLADPAAPVHITFYFFLIVFFAFFYVAISFN----PEEVADNMKKYGGF 354
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++ G+ T EYL+ + + G L L ++A T+ N+ F +G TS+LII
Sbjct: 355 IPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGA-NQNFPLGGTSILII 413
Query: 423 VGSIIELRRSYQA 435
VG +E + ++
Sbjct: 414 VGVGLETVKQIES 426
>gi|169335649|ref|ZP_02862842.1| hypothetical protein ANASTE_02069 [Anaerofustis stercorihominis DSM
17244]
gi|169258387|gb|EDS72353.1| preprotein translocase, SecY subunit [Anaerofustis stercorihominis
DSM 17244]
Length = 418
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 199/431 (46%), Gaps = 35/431 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSFVSGSVDELGDFGA 78
E+R+R+ T ++ I R+G FI +P D + L+ +SG+ +F
Sbjct: 13 ELRKRILFTLAMLCIFRLGGFIAVPFIDTAAVDTMVNNNSMFGLLNIISGN-----NFRT 67
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
S F + I+P I ASI++Q+L +P+L +L EG +G +KI SY ++++ A+++
Sbjct: 68 ---FSIFAMSITPYINASIILQLLTIAIPALERLSHEGEEGRKKISSYTRYLTVVLALIQ 124
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A+ +A + + S V V A + G + W+ + I+E G G G S++I G
Sbjct: 125 ALGIA---FSFKQILTTDSAFTVAVVALTITAGTSFLMWLGENITEHGIGNGISILIFAG 181
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFK 257
I+ L + Q+ S+ +L + VF I+ + VV + EG RK+ +QY
Sbjct: 182 IIANIPSALGYLYEQVTSGSIT--GVLLVIFLVFVILVIAGVVEINEGVRKIPVQY---- 235
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 317
A +IP IN SG+ P++ + + FP+ LAS P W +
Sbjct: 236 -AKRVVGRKMYGGQNTHIPLKINQSGVMPIIFASTITMFPATLASFF--PNWGFAAWLSK 292
Query: 318 PETSVGARPWVYYTIY-AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
GA + Y I FF + + I P ++A L + G IP ++PG +TI YL
Sbjct: 293 SLAWGGAASTILYVILIVFFTYFYTIVTFN--PDDVAKNLKQYGGFIPGIRPGHSTIVYL 350
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ G + L ++A I+ + + + G TS+LI+VG +E +
Sbjct: 351 KRTLNRLMVAGSIFLVVIAVLPIIVGNVM---DLSLQFGGTSLLIVVGVALETVNQLEQQ 407
Query: 437 NVMPSLSKALR 447
+M + L+
Sbjct: 408 MIMRNYKGFLK 418
>gi|92112574|ref|YP_572502.1| preprotein translocase subunit SecY [Chromohalobacter salexigens
DSM 3043]
gi|91795664|gb|ABE57803.1| protein translocase subunit secY/sec61 alpha [Chromohalobacter
salexigens DSM 3043]
Length = 443
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 204/423 (48%), Gaps = 31/423 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVDELGDF-----GA 78
SE+ RL + IV+ RIG IP+PG + D L+ F LG F GA
Sbjct: 15 SELWARLRFVFIAIVVYRIGAHIPVPGIN-----PDQLAALFRENQGTILGMFNMFSGGA 69
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S F LGI P I ASI+MQ+L + P L QL+KEG G KI Y + ++ A+++
Sbjct: 70 LSRMSIFALGIMPYISASIIMQLLTAVSPQLEQLKKEGEAGRRKINQYTRYGTVVLALIQ 129
Query: 139 AVIVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
A +A + + Y+ S + F V GA+ + W+ + I+E G G G SLII
Sbjct: 130 ATGMAVGLVGQGVAYSGDLSFYFTAIVTF--VAGAVFLMWLGEQITEKGIGNGISLIIFA 187
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGF 256
GI+ G + + + L + W L L V I T+ VV E G R++ + Y
Sbjct: 188 GIVAGLPSAIGQSFT-LARNDGAWNILPLLALAVLGIATVAFVVFIERGQRRITVNYPRR 246
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
++ + Y+P +N +G+ P + + +L FP+ + +G Q++ +
Sbjct: 247 QVGNKMYAGQ-----SSYLPLKVNMAGVIPPIFASSILLFPASIGQWVGE--GQNMAWLQ 299
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
++G +Y ++A V F F A + PK++AD L K GA +P ++PG+ T
Sbjct: 300 TVSQAMGPGQPLYILLFAAAVLFFCFFYTALVFNPKDVADNLKKSGAFLPGIRPGEQTAR 359
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIELRRSY 433
Y+ K+ +G L + T+ +++ +L F G TS+LI+V +++
Sbjct: 360 YVDKVMTRLTLFGALYI----TAVSLMPQFLVVAWQVPFYFGGTSLLIVVVVVMDFMAQV 415
Query: 434 QAY 436
Q++
Sbjct: 416 QSH 418
>gi|340795289|ref|YP_004760752.1| preprotein translocase subunit [Corynebacterium variabile DSM
44702]
gi|340535199|gb|AEK37679.1| preprotein translocase subunit [Corynebacterium variabile DSM
44702]
Length = 443
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 188/394 (47%), Gaps = 33/394 (8%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG------SVDELGD 75
+F +++RR++ T ++++ RIG IP PG D + + + S S+ L
Sbjct: 7 AFRDADLRRKILFTLGMVILYRIGSQIPTPGVDYATVTEQVRNLTSDGQTSMYSLINLFS 66
Query: 76 FGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+LS F +GI P I ASI++Q+L ++P QL+KEG G K+ Y ++++ A
Sbjct: 67 GGALLQLSIFAIGIMPYITASIIVQLLTVVIPRFEQLKKEGQSGQAKMTEYTRYLTVALA 126
Query: 136 ILEAVIVACYSLPYSIYAASHSVKHVMVTAF-------LLVCGAMTMSWICDTISESGFG 188
+L++ + + + + V V F ++ GA+ + WI + I++ G G
Sbjct: 127 LLQSSGIVALANNKQLLGSGQQVLRDDVGLFGIITMVVIMTAGAVLVMWIGELITDRGIG 186
Query: 189 QGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
G SL+I G+ T + +S L S +P G++ ++ + V V +G R+
Sbjct: 187 NGMSLLIVAGMATHLPA---QGMSILQDSGGFVFP---GVVVAMLVLVVLVVFVEQGQRR 240
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY K R+ E Y+P +N +G+ PV+ + LL P ++ I+ S
Sbjct: 241 IPVQYA--KRMVGRRQYG---ETSTYLPLKVNQAGVIPVIFASSLLTVPILITQIIQSGG 295
Query: 309 WQHV-----KEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGA 361
+ ++++N T W Y A + F F I P + AD + K G
Sbjct: 296 GEQADNWWNRDVMNILTD--PSDWRYIVFMAVMIIFFAFFYVSIQYDPNDQADNMKKYGG 353
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILA 395
IP ++PG+ T EYL ++ G + L+I+A
Sbjct: 354 FIPGIRPGRPTAEYLGRVMNRLLAVGSVYLAIIA 387
>gi|85706699|ref|ZP_01037791.1| preprotein translocase SecY [Roseovarius sp. 217]
gi|85668757|gb|EAQ23626.1| preprotein translocase SecY [Roseovarius sp. 217]
Length = 447
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 202/428 (47%), Gaps = 42/428 (9%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAE 79
+E+R+R+ T L+++ R+G FIP+PG D + + F+ G+ +G GA
Sbjct: 14 TELRKRILFTLGLLIVYRLGTFIPVPGIDGIALRE----FMEGAQASIGGMLSMFTGGAL 69
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
++ F LGI P I ASI++Q++ +VP+L QL+KEG G +KI Y + ++ A L++
Sbjct: 70 GRMGIFALGIMPYISASIIVQLMTAMVPALEQLKKEGEQGRKKINQYTRYGTVVLATLQS 129
Query: 140 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
+A SL + + ++ LV G M + W+ + I+ G G G SLII VGI
Sbjct: 130 YGLAV-SLQSGEMVTNPGMFFIVSCMITLVGGTMFLMWLGEQITARGVGNGISLIIFVGI 188
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQY----Y 254
+ L + + G S P ++ + V + + VV E RK+ +QY
Sbjct: 189 IAEVPAALAQFFAS--GRSGAVSPAVIVGVMVMVVAVIAFVVFMERSLRKIHIQYPRRQV 246
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS---PFWQH 311
G K+ ++P +NP+G+ P + + LL P+ + + GS P
Sbjct: 247 GMKIYDGGSS---------HLPVKVNPAGVIPAIFASSLLLLPATITTFSGSTTNPVLST 297
Query: 312 VKEILNPETSVGARP--WVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPG 369
V P +P +++TI F F F++A E+AD L IP ++PG
Sbjct: 298 VMAYFGP-----GQPLYLLFFTIMIVFFAYFYTFNVAFKTDEVADNLKNQNGFIPGIRPG 352
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIE 428
K T EYL + A G L+ + +L LR + F G TSVLI+V ++
Sbjct: 353 KRTAEYLDYVVARVLVLGSAYLAAVC----LLPEVLRNQFAIPFYFGGTSVLIVVSVTMD 408
Query: 429 LRRSYQAY 436
+ Q++
Sbjct: 409 TIQQVQSH 416
>gi|356517020|ref|XP_003527188.1| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
[Glycine max]
Length = 540
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 196/432 (45%), Gaps = 50/432 (11%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL----IPQDYL-----SFVSGSVDE 72
FFK + + + +SR+G +IPL G +R + Q+ L SF G +
Sbjct: 123 DFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGR 182
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWIS 131
LG LGI P I A I+ Q+L + P L L+K EG G +K+ Y + S
Sbjct: 183 LG---------VCSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKVLQYTRYAS 233
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+GFAI++A+ + PY S + V+ + LL G++ +I + I++ G G+
Sbjct: 234 VGFAIVQAIGQVLFLRPY---VNDFSTEWVISSVILLTLGSVFTMYIGERITDLKLGNGT 290
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIV------TMWAVVVTEG 245
SL+I I++ + + ++Q + +G+ TIV + V V E
Sbjct: 291 SLLIFTNIISYLPASFGRTIAQAFNDA--------NYIGLGTIVLSFFLLVVGIVYVQEA 342
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
RK+ L Y AS S E Y+PF +N SG+ P++ +T LA P LA G
Sbjct: 343 ERKIPLNY-----ASRFTSRSTGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG 397
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIY--AFFVFLFNIFDIANLPKEIADYLNKMGARI 363
+ LNP G ++ + I AFF + + + P ++++ L + GA I
Sbjct: 398 LTALKKAAVALNP----GGSFYLPFNILLIAFFNYYYTFLQLD--PDDVSEQLKRQGASI 451
Query: 364 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 423
P V+PG+ T ++ + + G L+ILA +++ + + TS+LI+V
Sbjct: 452 PLVRPGRTTATFIKTVLSRISVLGSTFLAILAAGPAVVEQ-ITHLTAFRGFAGTSILILV 510
Query: 424 GSIIELRRSYQA 435
G + R QA
Sbjct: 511 GCATDTARKVQA 522
>gi|325972641|ref|YP_004248832.1| preprotein translocase subunit SecY [Sphaerochaeta globus str.
Buddy]
gi|324027879|gb|ADY14638.1| preprotein translocase, SecY subunit [Sphaerochaeta globus str.
Buddy]
Length = 438
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 217/461 (47%), Gaps = 60/461 (13%)
Query: 17 NNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--------------QDY 62
N+ E + ++R+++F+T L+++SR+G IP+PG D ++ +Y
Sbjct: 3 NSLVEMYRIKDLRKKIFITLGLLIVSRVGAVIPIPGIDPEVLKLFFLSQSSSSNIGLTEY 62
Query: 63 LSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEK 122
L+F SG GA S F LG+ P I I++Q+L ++PSL +L ++ GH+K
Sbjct: 63 LNFFSG--------GAFSNFSLFMLGVMPYISTQIIVQLLMLVIPSLKKLAQDP-SGHKK 113
Query: 123 IKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTI 182
I+ Y + ++ ++++ +V Y+ V +V + G+M + WI + I
Sbjct: 114 IQQYTRYGTIVVCLIQSYVVTIYANSIPGVMTMGIVPFTLVAMLTVTTGSMLLIWIGNKI 173
Query: 183 SESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 242
++ G G G SL+I GI+ + E + + + S+ P ++ ++ V +V + VV
Sbjct: 174 TQWGIGNGISLLIFAGIVARFPEAMSVLFRSI--SAGVLNPIVVLVVFVMFLVVVALVVY 231
Query: 243 TE-GCRKVKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
E G RK+ + Y G K+ A YIP +NPSG+ PV+ + LL+FP
Sbjct: 232 EEQGVRKIPVNYAKRVVGRKMYGAQST---------YIPIKVNPSGVIPVIFASALLSFP 282
Query: 298 SILASILGSPF-W-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIA 353
+A+ LG W LNP+ GA Y IYA + F F ++ P E+A
Sbjct: 283 LQIATTLGPEVRWLAAFANWLNPQ---GAP---YLIIYALLIIAFAFFYTQVSMNPVEMA 336
Query: 354 DYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINE-GF 412
+ + G +P V+ K EYLT++ G L L+ +A T++ + +
Sbjct: 337 KQIRENGGSVPGVRTEKLE-EYLTRVLNRIVLPGSLFLAFIALIPTLVQKFFNFPSTVAM 395
Query: 413 SIGFTSVLIIVGSIIELRRS---------YQAYNVMPSLSK 444
G TS+LI+VG ++ R Y +NV SK
Sbjct: 396 LFGGTSLLILVGVDLDTMRQIEGIMKMHHYDGFNVGGKKSK 436
>gi|2500729|sp|Q59916.1|SECY_STRGR RecName: Full=Protein translocase subunit SecY
gi|1213244|emb|CAA65161.1| membrane translocase [Streptomyces griseus]
Length = 437
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 201/436 (46%), Gaps = 36/436 (8%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
A +F ++R++L T +IVI R+G IP PG D + Q SG + L
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVIYRLGAHIPAPGVDYSKVQQCIDQADSGGLLGLMQMFSG 65
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ AI
Sbjct: 66 GALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALAI 125
Query: 137 LEAVIVACYSLPYSIY---------AASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
L+ + + +++ A S+ ++ + G + W+ + I++ G
Sbjct: 126 LQGTGLVATARSGALFQNCSVGSQIVADKSIFTTIIMVLTMTAGTPPVMWLGELITDRGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKML-SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G S+ + + I + L+ + S L W F +L F +V + V V +
Sbjct: 186 GNGMSIPMFISIAATFPGALWAIKESGKLADG--WIEFGTVILIGFVMVAL-VVFVEQAQ 242
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA----S 302
R++ +Q + + + YIP +N +G+ PV+ + LL P+++ S
Sbjct: 243 RRIPVQLPKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIVQFSNS 297
Query: 303 ILGSPFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKM 359
G W + G P+ Y+ + FF F + I+ P E+AD + K
Sbjct: 298 QAGWATW------IQDNFVTGDHPYYIATYFVLIVFFAFFY--VAISFNPDEVADNMKKY 349
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G TS+
Sbjct: 350 GGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGGANQNFPFGGTSI 409
Query: 420 LIIVGSIIELRRSYQA 435
LIIVG +E + ++
Sbjct: 410 LIIVGVGLETVKQIES 425
>gi|169632370|ref|YP_001706106.1| preprotein translocase subunit SecY [Acinetobacter baumannii SDF]
gi|169151162|emb|CAO99834.1| secretion protein [Acinetobacter baumannii]
Length = 452
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 209/432 (48%), Gaps = 42/432 (9%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 23 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 78
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 79 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 138
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
AV + C L S + + LV G M + W+ + I+E G G G S+II G
Sbjct: 139 AVGM-CAGLIGQGITLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 197
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 255
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 198 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 251
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP-------- 307
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 252 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIK 308
Query: 308 -FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
Q + +L+P +P +Y ++ + F F A + PKE+++ L + GA +P
Sbjct: 309 RSLQDLALVLSP-----GQP-LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVP 362
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG+ T YL I F G + ++++ IL F +G TS+LI+V
Sbjct: 363 GIRPGEQTARYLDHILNRLTFIGAIYIAVICLMPMILQ---SSFGIPFYLGGTSLLIVVV 419
Query: 425 SIIELRRSYQAY 436
+++ QA+
Sbjct: 420 VVMDFMAQLQAH 431
>gi|307543845|ref|YP_003896324.1| preprotein translocase subunit SecY [Halomonas elongata DSM 2581]
gi|307215869|emb|CBV41139.1| preprotein translocase subunit SecY [Halomonas elongata DSM 2581]
Length = 443
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 207/429 (48%), Gaps = 43/429 (10%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVDELGDF-----GA 78
SE+ RL + IV+ RIG IP+PG I D L+ F LG F GA
Sbjct: 15 SELWARLRFVLLAIVVYRIGAHIPVPG-----INPDQLAALFREQQGTILGMFNMFSGGA 69
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI+MQ+L + P L QL+KEG G KI Y + ++ A+++
Sbjct: 70 LERMSILALGIMPYISASIIMQLLTAVSPQLEQLKKEGEAGRRKISQYTRYGTVLLALVQ 129
Query: 139 AVIVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
A ++ I Y A S + F VCGA+ + W+ + I+E G G G SL+I
Sbjct: 130 ATGMSVGLASQGIAYTADFSFYFTAIVTF--VCGAVFLMWLGEQITEKGIGNGISLLIFS 187
Query: 198 GILTGYTETLYKMLSQLLGSSVRW--WPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYY 254
GI+ G + + +L + W P + L LG+ T+ + V + G R++ + Y
Sbjct: 188 GIVAGLPGAVGQAF-ELARNDGAWNVLPLLALSALGIATVA--FVVFIERGQRRLTVNYP 244
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQ 310
++ + Y+P +N +G+ P + + +L FP+ L +G+ + Q
Sbjct: 245 RRQVGNKMYAGQ-----SSYLPLKVNMAGVIPAIFASSILLFPASLGQWIGAGDGMEWLQ 299
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKP 368
+ L P +P +Y ++A V F F A + PK++AD L K GA +P ++P
Sbjct: 300 RASQALGP-----GQP-LYILLFAAAVVFFCFFYTALVFNPKDVADNLKKSGAFLPGIRP 353
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSII 427
G+ T Y+ K+ +G L + T+ +++ +L N F G TS+LI+V I+
Sbjct: 354 GEQTARYVDKVMTRLTLFGALYI----TAVSLMPQFLIVAWNVPFFFGGTSLLIVVVVIM 409
Query: 428 ELRRSYQAY 436
+ Q++
Sbjct: 410 DFMAQVQSH 418
>gi|410464323|ref|ZP_11317769.1| preprotein translocase, SecY subunit [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409982574|gb|EKO39017.1| preprotein translocase, SecY subunit [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 437
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 198/422 (46%), Gaps = 29/422 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E++++L T +L+ + RIG +P+PG D + D+ ++ L D G LS
Sbjct: 14 ELKKKLLWTFLLVAVYRIGVHVPVPGVDSAAL-ADFFESAKNTLFGLFDMFSGGGLRNLS 72
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILEAVIV 142
F LGI P I ASI++Q+L + P L +++KE G G +KI Y + ++ ++ +
Sbjct: 73 IFALGIMPYISASIIIQLLTVVSPELAKMQKEDGAAGKKKITQYTRYGTVLITCIQGFGI 132
Query: 143 ACYSLPYSIYAASHSV-----KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
A + + V ++T L G + + W+ + ++E G G G SLII
Sbjct: 133 AVGLESMASPTGAPVVLMPGWGFRLMTIITLCAGTVFLMWLGEQLTEKGIGNGISLIIYS 192
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGF 256
GI+ G + L + P ML L+ + + A+V E G R++ +QY
Sbjct: 193 GIVAGLPRAVLSTFDLLKAGELS--PLMLILIVALMLAVLVAIVFMERGQRRIPIQY-AK 249
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
++ T ++P +N +G+ P + + +L FP+ L P+ + V
Sbjct: 250 RMVGRKMYGGQTT----HLPLRVNTAGVIPPIFASSILLFPATLGEFSSVPWLKTVASFF 305
Query: 317 NPETSVGARPWVYYTIYAFFVFLFN--IFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
+P+T ++ + FF + + IFD P +IA+ + K G IP ++PG T E
Sbjct: 306 SPQTM--TYNVIFIALIVFFCYFYTAIIFD----PADIAENIRKQGGFIPGIRPGAKTKE 359
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+ K+ WG + +S + +L +++ N F G TS+LI+VG ++ +
Sbjct: 360 YIDKVLVRITLWGSMYISAVCVLPMML---IQQFNVPFYFGGTSLLIVVGVAMDFMSQIE 416
Query: 435 AY 436
+Y
Sbjct: 417 SY 418
>gi|312866988|ref|ZP_07727199.1| preprotein translocase, SecY subunit [Streptococcus parasanguinis
F0405]
gi|417917030|ref|ZP_12560593.1| preprotein translocase, SecY subunit [Streptococcus parasanguinis
SK236]
gi|311097470|gb|EFQ55703.1| preprotein translocase, SecY subunit [Streptococcus parasanguinis
F0405]
gi|342831194|gb|EGU65516.1| preprotein translocase, SecY subunit [Streptococcus parasanguinis
SK236]
Length = 436
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 213/438 (48%), Gaps = 46/438 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 73
++F ++R ++ T +I++ RIG I +PG + +++ + LS VSG+
Sbjct: 8 DAFKVKQVRSKILFTIFIILVFRIGTTITVPGVNAKILNNLQDVSFLNMLSLVSGN---- 63
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
A S F LG+SP I ASI++Q+L ++P V+ K+G G K+ +ISL
Sbjct: 64 ----AMRNFSVFALGVSPYITASIVVQLLQMDLLPKFVEWGKQGEVGRRKLNQATRYISL 119
Query: 133 GFAILEAVIVAC--YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ + ++L + A+ + K ++ +L G+M ++W+ + I++ G+G G
Sbjct: 120 VLAFVQSIGITATFHTLSQAKLVATPNTKTYLLIGAILTTGSMIVTWLGEQITDKGYGNG 179
Query: 191 SSLIICVGILTGYTETLYKMLSQLL-----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
S+II GI++ E + ++ G F+ L+ ++ + V +
Sbjct: 180 VSMIIFAGIVSSIPEMIKEIYENAFVNVRSGQMTNSLIFVGVLILAVLVIVYFTTFVEQA 239
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
K+ +QY K+A A S Y+P +NP+G+ PV+ + + A P+ + ++
Sbjct: 240 QYKIPIQYT--KIAQGAPSSS-------YLPLKVNPAGVIPVIFASSITAAPAAIFQVIS 290
Query: 306 SPFW-----QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNK 358
+ + + + +L T G +YA + LF F + P++ A+ L K
Sbjct: 291 AMGYNAGWVRTAQAMLATNTPTGV------AMYALLIILFTFFYTFVQINPEKTAENLQK 344
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 418
GA IP V+PGK T E+++++ G + L + T IL L + + ++G TS
Sbjct: 345 SGAYIPGVRPGKGTEEFMSRLLRRLASVGSVFLGFI-TIIPILARDLFGLTDAVALGGTS 403
Query: 419 VLIIVGSIIELRRSYQAY 436
+LII+ + IE + + Y
Sbjct: 404 LLIIISTGIEGMKQLEGY 421
>gi|398993736|ref|ZP_10696674.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM21]
gi|398134079|gb|EJM23254.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM21]
Length = 442
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 204/424 (48%), Gaps = 30/424 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF---GAELK 81
SE+ RL + I++ RIG IP+PG + RL D G++ L + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRL--ADLFRQNEGTILSLFNMFSGGALER 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y ++++ A+++A+
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYLTVALALVQAIG 133
Query: 142 VACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
++ + + S V VT F V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSIGLAGQGVSFTGDFSFHFVAVTTF--VAGAMFMMWLGEQITERGVGNGISMLIFSGIV 191
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 259
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 192 AGLPRAIGQSFESARQGDINIFALVAIGLLAVAII--GFVVFIERGQRRIAVHY-----A 244
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQHVKEI 315
+ ++P +N +G+ P + + +L FP+ L + G + Q + +
Sbjct: 245 KRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMGWLQDISQS 304
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEY 375
+ P + + I+ F + +F+ PK++A+ L K GA IP ++PG+ + Y
Sbjct: 305 IAPGQPLNILLFSAGIIFFCFFYTALMFN----PKDVAENLKKSGAFIPGIRPGEQSARY 360
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
+ + +G L + T+ +L +L N F +G TS+LI+V +++ Q
Sbjct: 361 IDGVLTRLTLFGALYM----TAVCLLPQFLVVAANVPFYLGGTSLLIVVVVVMDFMSQVQ 416
Query: 435 AYNV 438
++ V
Sbjct: 417 SHLV 420
>gi|406980709|gb|EKE02274.1| hypothetical protein ACD_20C00402G0004 [uncultured bacterium]
Length = 443
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 209/437 (47%), Gaps = 41/437 (9%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ----DYLSFVSGSVDELGDFGAELK 81
S ++ +L T V+I + R G IP+ G ++ I + +SF+ +L GA +
Sbjct: 19 SGLKEKLIFTFVMIAVFRFGTQIPIFGINQEAITNLAGNNIISFL-----DLFSGGALGR 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILEAV 140
+S F LGI P I ASI+MQ+L ++P L L+KE G +G KI Y + ++G A +A
Sbjct: 74 VSIFALGIGPYITASIIMQLLTVVIPHLETLQKEEGEEGRRKISQYTRYFTVGLAAFQAT 133
Query: 141 IVACY--SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
I + S P I A ++ + L G++ + W+ + I+E G G G S++I +
Sbjct: 134 IFMTFLSSQPGMISAGANVPFVFAQSVVALSAGSVFIMWLAELITEKGIGNGGSMLIFIS 193
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I++G + +QL+ + ++ LL +F V++ E RKV +
Sbjct: 194 IISGI-PVYMRQTAQLVAPNPASQFALVILLLIFLATIFLIVIMQEAVRKVII------- 245
Query: 259 ASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS-ILASI---LGSPFWQHV 312
+A R+ + V +IPF +NP G+ P++ +L FP+ I+ +I L Q +
Sbjct: 246 VNAKRQVGNKVYGGVNTHIPFKLNPGGVMPIIFAVAILLFPTTIVGAITPNLPPGIMQDI 305
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANL-PKEIADYLNKMGARIPNVKP 368
+ T + YY IY + F + N+ PKEIA+ L K G+ IP +KP
Sbjct: 306 ATFIT-TTLLNPAGIPYYAIYFLLIVALTFFYASIMPNMQPKEIANNLKKYGSSIPGIKP 364
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
GK T + + +I T F G + L I+A L I +G T+++I+VG ++
Sbjct: 365 GKPTADVIDQILGRTIFIGAMGLGIIALIPG-LASQATGITTLQGLGATTLIIMVGVALD 423
Query: 429 ---------LRRSYQAY 436
L R Y+ +
Sbjct: 424 FINQIKTHLLVRQYEGF 440
>gi|352105683|ref|ZP_08960890.1| preprotein translocase subunit SecY [Halomonas sp. HAL1]
gi|448747882|ref|ZP_21729534.1| SecY protein [Halomonas titanicae BH1]
gi|350598260|gb|EHA14382.1| preprotein translocase subunit SecY [Halomonas sp. HAL1]
gi|445564530|gb|ELY20649.1| SecY protein [Halomonas titanicae BH1]
Length = 443
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 205/427 (48%), Gaps = 39/427 (9%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVDELGDF-----GA 78
SE+ RL + IV+ RIG IP+PG I D L+ F LG F GA
Sbjct: 15 SELWARLRFVLLAIVVYRIGAHIPVPG-----INPDQLAALFREQQGTILGMFNMFSGGA 69
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI+MQ++ + P L QL+KEG G KI Y + ++ A ++
Sbjct: 70 LERMSVLALGIMPYISASIIMQLMTAVSPHLEQLKKEGEAGRRKISQYTRYGTVILAFVQ 129
Query: 139 AVIVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
A ++ I Y+A S V F V GA+ M W+ + I+E G G G SL+I
Sbjct: 130 ATGMSVGLASQGIAYSADFSFYFTAVITF--VSGAVFMMWLGEQITEKGIGNGISLLIFA 187
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGF 256
GI+ G + + +L + W L L V I T+ VV E G R++K+ Y
Sbjct: 188 GIVAGLPSAVGQAF-ELARNEGAWNVLPLLALSVLGIATVAFVVFIERGQRRLKVNYPRR 246
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHV 312
++ + Y+P +N +G+ P + + +L FP+ + +G+ + Q
Sbjct: 247 QVGNKMYAGQ-----SSYLPLKVNMAGVIPAIFASSILLFPASIGQWVGAGEGMEWLQRA 301
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGK 370
+ L P +P +Y ++A V F F A + PK++AD L K GA +P ++PG+
Sbjct: 302 SQALGP-----GQP-LYILLFAAAVVFFCFFYTALVFNPKDVADNLKKSGAFLPGIRPGE 355
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIEL 429
T Y+ K+ +G L + T+ +++ +L N F G TS+LI+V I++
Sbjct: 356 QTARYIDKVMTRLTLFGALYI----TAVSLMPQFLIVAWNVPFFFGGTSLLIVVVVIMDF 411
Query: 430 RRSYQAY 436
Q++
Sbjct: 412 MAQVQSH 418
>gi|374337107|ref|YP_005093805.1| Preprotein translocase SecY subunit [Streptococcus macedonicus
ACA-DC 198]
gi|372283205|emb|CCF01361.1| Preprotein translocase SecY subunit [Streptococcus macedonicus
ACA-DC 198]
Length = 434
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 218/435 (50%), Gaps = 53/435 (12%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAE 79
+R ++F T +I++ RIG I +PG + + + Q + L+ VSG + + +F
Sbjct: 14 NVRNKIFFTLFIILVFRIGTHITVPGINAKSLEQLGEVPFLNMLNLVSG--NAMSNF--- 68
Query: 80 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A ++
Sbjct: 69 ---SVFSMGVSPYITASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYISLVLAFVQ 125
Query: 139 AV-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++ I A ++ SI ++ +VK ++ LL G+M ++W+ + I++ GFG G S+II
Sbjct: 126 SIGITAGFNTLSSISLVSTPNVKTYLLIGALLTTGSMIVTWLGEQITDKGFGNGVSMIIF 185
Query: 197 VGILTGYTE---TLYKML------SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
GI++ + T+Y+ S LL S + F+ L+ + + V +
Sbjct: 186 AGIISSIPKAISTIYEDFFVNVRSSDLLSS----YIFVALLIVAVLAIVFFTTFVQQAEY 241
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS- 306
K+ +QY KL A S Y+P INP+G+ PV+ + + PS + ++ +
Sbjct: 242 KIPIQYT--KLVQGAPTSS-------YLPLKINPAGVIPVIFASSITTIPSTIIPLISNG 292
Query: 307 ---PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGA 361
+ ++ LN +T G +YA + LF+ F + P++ A+ L K +
Sbjct: 293 KDISWLTTLESFLNYQTPSG------MVVYAVLIILFSFFYTFVQVNPEKTAENLQKGAS 346
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
IP+V+PG+ T EY++ + G + L+ ++ + I + ++ ++G TS+LI
Sbjct: 347 YIPSVRPGRETEEYMSSLLKKLATVGSIFLAFISLTPIIAQQAM-NLSSSIALGGTSLLI 405
Query: 422 IVGSIIELRRSYQAY 436
++ + IE + + Y
Sbjct: 406 LISTGIEGMKQLEGY 420
>gi|134298113|ref|YP_001111609.1| preprotein translocase subunit SecY [Desulfotomaculum reducens
MI-1]
gi|134050813|gb|ABO48784.1| protein translocase subunit secY/sec61 alpha [Desulfotomaculum
reducens MI-1]
Length = 419
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 215/441 (48%), Gaps = 30/441 (6%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+LN+ +F E+R +L T ++ + R+G IP+PG + P+ + + ++ LG
Sbjct: 1 MLNSLTTAFKLDELRSKLLFTLAMLFLFRVGAHIPVPGIN----PEAFANLLTKG-QLLG 55
Query: 75 DF-----GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
F GA S F + I+P I ASI+MQ+L ++P L +L KEG +G +KI Y +
Sbjct: 56 FFDVISGGAFKNASIFAMSITPYINASIIMQLLTVVIPHLEKLAKEGEEGRKKITQYTRY 115
Query: 130 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+ A ++A+ ++ + SV + + A G + + WI + I+E G G
Sbjct: 116 FTAVLAFVQAI---GMTMALKGALVNPSVLNYLTVAITFTAGTVLLMWIGEQITEKGIGN 172
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 249
G SL+I GI++ + + Q L + +L LL + T+V + V EG R++
Sbjct: 173 GISLLIFTGIVSRIPSAMVN-IGQYLKAGTINILSILVLLIIGTLVIAAVIYVQEGQRRI 231
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 309
+QY K R T ++P +N +G+ P++ + LL FP +AS W
Sbjct: 232 PVQYA--KRVVGRRVYGGQTS---HLPLKVNQAGVIPIIFASSLLMFPGQIAS------W 280
Query: 310 QHVKEILNPETSVGARPWVYYTI-YAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNV 366
H + + A V ++ YA + F F A + P ++A+ + K G IP +
Sbjct: 281 FHGNAVADWYLRWFAWGGVLNSVLYALLIVGFTYFYTAVIMNPVDMAENIKKYGGFIPGL 340
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PG++T EY+ K+ + G + L+++A ++ R N F G T++LI+VG
Sbjct: 341 RPGRSTAEYIGKVMSRITLAGAVFLALIAILPNVILALTRIPNVYF--GGTALLIVVGVA 398
Query: 427 IELRRSYQAYNVMPSLSKALR 447
++ + +++ +M S L+
Sbjct: 399 LDTMKQIESHLLMRSYQGFLK 419
>gi|392961470|ref|ZP_10326928.1| preprotein translocase, SecY subunit [Pelosinus fermentans DSM
17108]
gi|421056292|ref|ZP_15519219.1| preprotein translocase, SecY subunit [Pelosinus fermentans B4]
gi|421058296|ref|ZP_15521008.1| preprotein translocase, SecY subunit [Pelosinus fermentans B3]
gi|421064602|ref|ZP_15526463.1| preprotein translocase, SecY subunit [Pelosinus fermentans A12]
gi|421072729|ref|ZP_15533833.1| preprotein translocase, SecY subunit [Pelosinus fermentans A11]
gi|392438708|gb|EIW16531.1| preprotein translocase, SecY subunit [Pelosinus fermentans B4]
gi|392445156|gb|EIW22488.1| preprotein translocase, SecY subunit [Pelosinus fermentans A11]
gi|392453727|gb|EIW30590.1| preprotein translocase, SecY subunit [Pelosinus fermentans DSM
17108]
gi|392460762|gb|EIW37024.1| preprotein translocase, SecY subunit [Pelosinus fermentans A12]
gi|392461105|gb|EIW37333.1| preprotein translocase, SecY subunit [Pelosinus fermentans B3]
Length = 418
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 209/429 (48%), Gaps = 45/429 (10%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
+E+R+++ T + ++ R G IP+PG D +I Q F SG++ L D GA K
Sbjct: 12 TELRQKVVFTLAMFLVFRAGTHIPVPGVDVSVIEQ---MFTSGNLFGLLDLFSGGALSKF 68
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S F + I+P I ASI+MQ++ +VP+ Q KEG +G +K+ + ++ ++A+ +
Sbjct: 69 SIFAMSITPYINASIIMQLITIVVPTFEQWSKEGEEGRKKLTQITRYGTVLLGFIQAIGM 128
Query: 143 ACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTG 202
A L +I + + ++ A L G + W+ + I+E G G G SLII GI++
Sbjct: 129 AI-GLKAAII--NPGIASTLLIALTLTAGTTFLMWLGEQITEKGIGNGISLIIFAGIVSR 185
Query: 203 YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV----VTEGCRKVKLQYYGFKL 258
+ LY + L ++ + +L F I+ + +V +T+G R++ +QY
Sbjct: 186 LPDGLYMLYEYLTAGTINIFNVLL-----FAIIALAMIVLVIAITQGQRRIPVQY----- 235
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
A +IP +N +G+ P++ + +L FP +A + +I
Sbjct: 236 AKRVVGRKTYGGHSTHIPLKVNQAGVIPIIFASSVLMFPVTIAQFV---------DIAWV 286
Query: 319 ETSVGARPW---VYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKMGARIPNVKPGKAT 372
+T G W + +YA + F F A N+ ++A+ + K G IP ++PGK T
Sbjct: 287 KTVAGWFAWGTPLQTFLYALLIIFFTYFYTAVTLNI-SDMAENMKKYGGFIPGLRPGKPT 345
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINE--GFSIGFTSVLIIVGSIIELR 430
+YL ++ G + L+ +A IL +++ + G + G T++LI+VG ++
Sbjct: 346 ADYLDRVMTRITLAGSIFLAGIA----ILPNFIAAVTNIPGLNFGGTALLIVVGVALDTM 401
Query: 431 RSYQAYNVM 439
+ +A +M
Sbjct: 402 KQIEAIVLM 410
>gi|377809973|ref|YP_005005194.1| preprotein translocase subunit SecY [Pediococcus claussenii ATCC
BAA-344]
gi|361056714|gb|AEV95518.1| preprotein translocase, SecY subunit [Pediococcus claussenii ATCC
BAA-344]
Length = 432
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 208/420 (49%), Gaps = 36/420 (8%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 86
+IR+++ T ++++ R+G +I +PG + + + S + G ++ G S F
Sbjct: 13 DIRKKILFTLGILIVFRLGAYITVPGVNAKALQSLSSSGLVGIINTFSG-GGLTNYSIFA 71
Query: 87 LGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV-IVAC 144
+G+SP I A I++Q+L IVP V+ K+G G K+ ++++ A ++++ I A
Sbjct: 72 MGVSPYITAQIIVQLLQMDIVPKFVEWSKQGEVGRRKLNQVTKYLTVALAFVQSIGITAG 131
Query: 145 YS-LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL--- 200
++ L V+ +L G M +W+ D I++ G G G S+II GI+
Sbjct: 132 FNYLSQMNLVKEPGVQTFATIGLILTAGTMLTTWMGDMITDRGLGNGVSMIIFAGIIART 191
Query: 201 -TG----YTETLYKM-LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY 254
TG Y E SQ L S + ++ +L + VT W V + RKV +QY
Sbjct: 192 PTGIHQIYVEQFVNTPKSQWLQSYLYAGSILVAVLAIVIFVT-W---VQQASRKVPIQYT 247
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL-----ASILGSPFW 309
+ AS A E S Y+P +N +G+ PV+ + ++ P + A+ G ++
Sbjct: 248 --RRASGAPESS-------YLPLKVNVAGVIPVIFASSFISTPQTILMAFSANHSGEGWY 298
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPG 369
+ +K+I N +T+ GA + YT+ F F N P+++++ L K G+ IP V PG
Sbjct: 299 ETMKDIFNMQTTDGA---ILYTVLIVLFTFFYAFVQVN-PEKLSENLQKQGSYIPGVWPG 354
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
+ T Y++++ G L L ++A +L + ++E +G TS+LIIVG I+L
Sbjct: 355 RETQNYVSRLLMRLSVVGALFLGLVALIP-LLASNIFGLDESIGLGGTSLLIIVGVAIDL 413
>gi|295099219|emb|CBK88308.1| protein translocase subunit secY/sec61 alpha [Eubacterium
cylindroides T2-87]
Length = 431
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 205/432 (47%), Gaps = 23/432 (5%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR-RLIPQDYLSFVSGSVDELGDFGAELK 81
F +IR R+ T ++ R+G I +P + L+ + + ++ LG G E +
Sbjct: 9 FTNKDIRNRILFTLFAFLVYRLGSAITVPDVNTADLVAGIEDNSLFAMINLLGGGGLE-Q 67
Query: 82 LSFFQLGISPQIVASILMQVLC-HIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
S F LG++P I ASI++Q+L +VP L +L K G G + + Y ++++ FA +++
Sbjct: 68 FSIFALGVTPYITASIIIQLLSMDVVPHLSELAKNGATGRKTLDKYTRYLAVVFAFVQSF 127
Query: 141 -IVACYSLPYS-IYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+V +S Y+ + ++ +M A + G+M + WI D IS G G G S++I G
Sbjct: 128 SLVYGFSQTYTTLIEGGVTMAKIMYIATIFTAGSMFLVWIGDQISIKGIGNGISMVIMAG 187
Query: 199 ILTGYTETLYKMLSQLLGSSVR----WWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY 254
I+ + + L+G+ W F G + V+ ++ ++ ++ R++ +QY
Sbjct: 188 IVGRMPQQFADAWTTLIGAESTIENGAWLFA-GYILVYLLIIIFVTLINTAERRIPIQYT 246
Query: 255 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 314
+ + R +S Y+P +N + + PV+ + L+ P +AS F+
Sbjct: 247 SSSIQLSKRSESN------YLPLKVNSASVIPVIFASSLMMAPLQIAS-----FFPTNDI 295
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKAT 372
I + +G + W IY + F F + P++I++ L K GA IP+V+PG T
Sbjct: 296 IRTMQDWLGLQTWYSLVIYVLLILFFTFFYTKMQINPEKISENLGKSGAYIPSVRPGTET 355
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
Y+ K+ + G + L+++A I+ + ++G T ++I+VG IE R
Sbjct: 356 KNYVNKVLSRITVLGSICLALIAVLPHIMPLIWTDMPTSMALGGTGMIIVVGVAIETVRQ 415
Query: 433 YQAYNVMPSLSK 444
Q S K
Sbjct: 416 VQGLITQKSYKK 427
>gi|224370671|ref|YP_002604835.1| preprotein translocase subunit SecY [Desulfobacterium autotrophicum
HRM2]
gi|223693388|gb|ACN16671.1| SecY [Desulfobacterium autotrophicum HRM2]
Length = 437
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 207/434 (47%), Gaps = 45/434 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E++R+L +T L+ + R+G +P PG D + + G++ + + GA +LS
Sbjct: 14 ELKRKLLITFALLFVYRVGVHVPTPGIDGAAL-ASFFDNARGTLFAMFNMFSGGALDRLS 72
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q++ ++P L QL KEG G +KI Y + ++ ++++ ++
Sbjct: 73 VFALGIMPYISASIILQLMTVVIPHLEQLSKEGEQGRKKITQYTRYGTVVLSLIQGFGIS 132
Query: 144 CYSLPYSIYAASHSVKH-----VMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+ A S V + ++T L G + W+ + I+E G G G SLII G
Sbjct: 133 VGLESMTSPAGSPIVMYPGWEFRLMTVITLTAGTAFIMWLGEQITERGIGNGISLIIFAG 192
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQY---- 253
I+ + + L S+ F L +L V + + A++ E R++ +QY
Sbjct: 193 IVARMPIAIANTMR--LVSTGEMGVFSLIILIVLMVAVVAAIIFFETAQRRIPVQYAKRV 250
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 313
G K+ ++P IN +G+ P + + ++ FP+ LA+ + P + V
Sbjct: 251 VGRKMYGGQTS---------HLPLKINTAGVIPPIFASSIIMFPATLANFIDLPMMKTVA 301
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
++P + VY I+ F+ F F A P ++A+ + K G IP ++PGK
Sbjct: 302 AAMSPGS------IVYNLIFVGFIIFFCFFYTAVTFNPDDVAENMKKNGGYIPGIRPGKR 355
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE--- 428
T EY+ ++ G + +S++ T+L + + N F G T++LI+VG I+
Sbjct: 356 TAEYIDRVLTRITTGGAVYVSLVCVLPTML---MTKFNVPFYFGGTALLIVVGVSIDTVS 412
Query: 429 ------LRRSYQAY 436
+ R+Y+ +
Sbjct: 413 QIESHLITRNYEGF 426
>gi|323144984|ref|ZP_08079544.1| preprotein translocase, SecY subunit [Succinatimonas hippei YIT
12066]
gi|322415263|gb|EFY06037.1| preprotein translocase, SecY subunit [Succinatimonas hippei YIT
12066]
Length = 448
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 208/440 (47%), Gaps = 36/440 (8%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAE 79
SE+R RL + +V+ RIG ++P+PG + ++ + + SG++ +G F GA
Sbjct: 21 NSELRSRLLFVLIGLVMFRIGSYVPVPGVNAEVLARLFEE-QSGTI--IGMFNMFSGGAL 77
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+ S LGI P I ASI++Q+L I P+L +LRKEG G KI Y +L A L+A
Sbjct: 78 ERASVLALGIMPYISASIIIQLLAVINPTLAELRKEGESGRRKITQYTRVSTLFLAALQA 137
Query: 140 VIVACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
V +A +P + + VT LV G M + W+ + I+E G G G SLII
Sbjct: 138 VGIAT-GIPNMMPGLVDNPGFGFYFVTTVSLVTGTMFLMWLGEQITERGIGNGISLIIFA 196
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGF 256
GI+ G L Q + + L+GV +V + VV E G R++ + Y
Sbjct: 197 GIVAGLPRALAATFEQARQGDLSTIALL--LIGVVVVVVTFFVVFIERGQRRIVIDY--- 251
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG------SPFWQ 310
A + ++ +P IN SG+ P + + ++ FP + S G + Q
Sbjct: 252 --AKRQMGNRIYSQPRSTLPLKINMSGVIPAIFASSIILFPGTVVSWFGQGDNAVANVLQ 309
Query: 311 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKP 368
V L P +P +Y +YA + F F A + P+E+A+ L K GA IP ++P
Sbjct: 310 EVSLFLQP-----GQP-LYELLYAAAIVFFTFFYTALVFSPREVAENLKKSGAFIPGIRP 363
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G+ T ++ K+ G + + ++ +L ++ N F G TS+LIIV I++
Sbjct: 364 GEQTARFIDKVMTRLTLSGSIYMVLVCLVPQLLMNWF---NVQFYFGGTSLLIIVVVIMD 420
Query: 429 LRRSYQAYNVMPSLSKALRR 448
Q++ + +R+
Sbjct: 421 FVSQLQSHMMNQQYGDLMRK 440
>gi|255994827|ref|ZP_05427962.1| preprotein translocase, SecY subunit [Eubacterium saphenum ATCC
49989]
gi|255993540|gb|EEU03629.1| preprotein translocase, SecY subunit [Eubacterium saphenum ATCC
49989]
Length = 424
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 213/443 (48%), Gaps = 52/443 (11%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
A+++ K +IR ++ T +++++ R+G IP+PG +R ++ + + G + EL +
Sbjct: 6 AKAWKKQDIRHKMIFTLLMMIVYRLGANIPVPGINREVLSKLFDG--GGGIFELFNLFSG 63
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA +++ F L I+P I ASI++Q+L +P L L KEG +G +KI Y ++++ ++
Sbjct: 64 GAFSQMTIFALSITPYITASIILQLLTIAIPKLETLAKEGGEGQKKIAQYTRYLTVVLSL 123
Query: 137 LEAVIVACYSLPYSIYAASHSVKHVMVTAFLLV---CGAMTMSWICDTISESGFGQGSSL 193
++A+ + Y I S + + A ++V G + W+ + I++ G G G SL
Sbjct: 124 VQAI-----GITYGIVKPSLNDTGKLSIALVVVVLTAGTAFLMWLGEQINQYGIGNGISL 178
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIV------TMWAVVVTEGCR 247
+I GI+ +M + L GS V++ + + + V + +++ EG R
Sbjct: 179 LIFAGIIA-------RMPTLLQGSMVKYEAGEVDAVSIALFVLFAVVIIVGIIMIQEGQR 231
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASILGS 306
+V +QY A +IP +N +G+ PV+ + L P + + S
Sbjct: 232 RVPVQY-----AKRVVGRKMYGGQSSHIPMKVNQAGVIPVIFSMAFLQTPLTFMHFWPNS 286
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIP 364
F Q + ++P S G WVY + F F ++ P EIA + G +P
Sbjct: 287 AFGQWAAKWMSPSGSPGV--WVYAIADVILILFFTYFYTAVSFNPLEIAQNMKANGGFVP 344
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF--TSVLII 422
++PGK T+EYL ++ F G + L+ ++ TIL + G SI F TS+LI
Sbjct: 345 GIRPGKTTVEYLNRVMTRITFVGAVFLAAISILPTILSQSM-----GLSIHFGGTSLLIA 399
Query: 423 VGSIIE---------LRRSYQAY 436
VG ++ L R YQ +
Sbjct: 400 VGVALDTMKQIENQMLMRDYQGF 422
>gi|302336361|ref|YP_003801568.1| protein translocase subunit secY/sec61 alpha [Olsenella uli DSM
7084]
gi|301320201|gb|ADK68688.1| protein translocase subunit secY/sec61 alpha [Olsenella uli DSM
7084]
Length = 426
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 213/442 (48%), Gaps = 41/442 (9%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPG--FDRRLIPQDYLSFVSGSVDE 72
+L A +F E+R ++ V+ ++ + R G ++P PG F R L S SG++
Sbjct: 1 MLKGIANAFRIPELRNKILVSIAILALYRFGAYLPAPGVPFARMLEAFSAASASSGAIAV 60
Query: 73 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 130
L F GA ++S F LGI P I A I++Q++ ++PSL +L KEG G KI Y ++
Sbjct: 61 LNLFSGGALSRVSVFSLGIMPYITAQIILQMMQAVIPSLGELAKEGESGQRKITQYTRYL 120
Query: 131 SLGFAILEAV----IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
++ A++ A+ + Y + +S +++ +++ +LV GA+ + W+ + I++ G
Sbjct: 121 TIVLALINAIGYLFLFKSYGINFSQMGFPEAIEDIIIVG-VLVTGAIIIMWLGEVITQRG 179
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G SLII I+ G L +S + SS L LL +F I+ + V + G
Sbjct: 180 VGNGMSLIIFANIMAGLPSAL---ISSVNTSSAGTIMTALTLLVIFAIIPV-IVYIERGQ 235
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R++ +QY A + Y+P +N +G+ P++ + +L P+ LA +
Sbjct: 236 RRIPVQY-----AKRVVGRKVMGGQSTYLPIKVNTAGVVPIIFASAILYLPAQLAVFFPN 290
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
W ++ N +S WV + + + F F A + P+E +D L K G IP
Sbjct: 291 VGW--IQAFANALSS----GWVNWILSVVLIVFFAYFYTAMVFNPEETSDQLRKSGGFIP 344
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTIL-----DHYLRRINEGFSIGFTSV 419
V+PG T Y+ + G L ++ +A +IL + L+ + G TSV
Sbjct: 345 GVRPGGPTAAYIKGVLDHITLPGALFMAAIAVVPSILFALTGNSLLQ------AFGGTSV 398
Query: 420 LIIVG----SIIELRRSYQAYN 437
LI+VG +I +L + +N
Sbjct: 399 LIMVGVAMDTISQLESQLKMHN 420
>gi|257125056|ref|YP_003163170.1| preprotein translocase subunit SecY [Leptotrichia buccalis
C-1013-b]
gi|257048995|gb|ACV38179.1| preprotein translocase, SecY subunit [Leptotrichia buccalis
C-1013-b]
Length = 435
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 207/432 (47%), Gaps = 28/432 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF------GAEL 80
E+ +R+ T ++I+++R+G I +PG + + + +F G + + F GA
Sbjct: 19 ELEKRVTFTLLMIMVARVGIHIAVPGINT----EAFKNFQQG--NAIAQFLNLFSGGAVE 72
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+ S F LGI P I ASI+ Q+L I P + +++KEG +KI + ++++ AI+++
Sbjct: 73 RASIFALGIVPYINASIVFQLLGVIFPKIDEMQKEGGKERDKITQWSRYVTIVLAIIQSF 132
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+A + K ++ T L+ G + WI + IS G G G+S++I + I+
Sbjct: 133 GIAVLMQNQGLVLEPGP-KFILSTVVLITGGTSFLMWISERISIRGIGNGTSMLIFLNIV 191
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 259
G + M + G +LGL + F + V+V R++ +QY G
Sbjct: 192 AGLPTVISAMYT---GLPSGMGKVLLGLSIVAFVVFIALMVIVQLAERRIPIQYAGKGSL 248
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE 319
S + + Y+P IN SG+ P++ + L+A P L S+L + +K L +
Sbjct: 249 GFGGGQSTVGK-RTYLPLKINMSGVMPIIFASVLMAAPPFLVSMLKA---GTLKNFLAAQ 304
Query: 320 TSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
+ Y ++A + +F+ F IA P ++AD L + G IP V+ GK T +YL
Sbjct: 305 FE--PKGAFYLLLFAILITVFSFFYTLTIAFDPDKVADDLKQSGGTIPTVRAGKETADYL 362
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
K+ F + LS+L I Y+ ++ +G TS+LI+VG+ +EL +Y
Sbjct: 363 EKVATRVTFGSAIFLSLLGIMPNIWFGYVLKLP--VMLGGTSLLILVGTAVELLLQIDSY 420
Query: 437 NVMPSLSKALRR 448
+ + + R
Sbjct: 421 LAVKQMKSFVNR 432
>gi|357636448|ref|ZP_09134323.1| preprotein translocase, SecY subunit [Streptococcus macacae NCTC
11558]
gi|357584902|gb|EHJ52105.1| preprotein translocase, SecY subunit [Streptococcus macacae NCTC
11558]
Length = 434
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 221/436 (50%), Gaps = 57/436 (13%)
Query: 28 IRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDELGDFGAEL 80
+R+++F T +I + R+G I +PG + + + Q + L+ VSG + + +F
Sbjct: 15 VRKKIFFTIFIIFVFRVGTHITVPGINAKSLEQLSDLPFLNMLNLVSG--NAMSNF---- 68
Query: 81 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +ISL A L++
Sbjct: 69 --SVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFLQS 126
Query: 140 V-IVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
V I A +S S+ + +V+ ++ +L G++ ++W+ D IS+ GFG G S+II
Sbjct: 127 VGITAGFSALSSVSLVKTPNVQTYLLIGAILTAGSVVVTWLGDQISDKGFGNGVSMIIFA 186
Query: 198 GILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFT-IVTMWAVVVTEGCRK 248
GI++ Y + + S L +S+ +GLL + + I+ + V + K
Sbjct: 187 GIISSIPSTIKSIYEDYFVNVRSGELTNSI----IFVGLLILASLIIVFFTTFVEQAEYK 242
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY KL A +S Y+P INP+G+ PV+ ++ + PS + PF
Sbjct: 243 IPIQYT--KLTQGAATNS-------YLPLKINPAGVIPVIFSSSITTIPSTII-----PF 288
Query: 309 WQHVKEILNPETSVGARPWVYYT------IYAFFVFLFNIFD--IANLPKEIADYLNKMG 360
+Q+ ++I T + W+ YT +YA + LF+ F + P++ A+ L K
Sbjct: 289 FQNGRDIPWLTT---LQEWLSYTNPTGMVVYAVLIVLFSFFYTFVQVNPEKTAENLQKNA 345
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
+ IP+V+PG+ T EYL + G + L+ +A S + ++ ++G TS+L
Sbjct: 346 SYIPSVRPGRETEEYLASLLRKLATIGSIFLAFVALSPIVAQQQF-GLSSSVALGGTSLL 404
Query: 421 IIVGSIIELRRSYQAY 436
I++ + IE + + Y
Sbjct: 405 IVIATGIEGMKQLEGY 420
>gi|399543673|ref|YP_006556981.1| preprotein translocase subunit secY [Marinobacter sp. BSs20148]
gi|399159005|gb|AFP29568.1| Preprotein translocase subunit secY [Marinobacter sp. BSs20148]
Length = 440
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 208/423 (49%), Gaps = 32/423 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGF--DR--RLIPQDYLSFVSGSVDELGDFGAELK 81
+E+R RL+ + +++ RIG IP+PG DR L Q+ + +S + + GA +
Sbjct: 16 AELRSRLWFVFLALLVYRIGAHIPVPGINPDRLAALFEQNQGTILS--MFNMFSGGALER 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI+MQ++ + P+L QL+KEG G KI Y + ++ A+L+
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAVNPTLEQLKKEGEAGRRKISQYTRYGTVILALLQGAG 133
Query: 142 VACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
++ + + + S V V +F V GA+ M W+ + I+E G G G SL+I GI+
Sbjct: 134 ISVGLASQGVTFNDTLSFHFVAVVSF--VSGAVFMMWLGEQITERGVGNGISLLIFAGIV 191
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGFKLA 259
G + + L Q + +LG +GV I + VV E G R++ + Y A
Sbjct: 192 AGLPGAIGQTLEQARNGEMSML-LVLG-IGVLAIAVIGFVVFMERGQRRLTINY-----A 244
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 315
+ + ++P +N +G+ P + + +L FP+ L G + + +
Sbjct: 245 KRQQGGRVFAQQSSHLPLKVNMAGVIPPIFASSILLFPASLGQWFGQGEGMEWLSDISQA 304
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
L P ++P +Y ++A V F F A + P+E+AD L + GA IP ++PG+ T
Sbjct: 305 LAP-----SQP-LYIILFAAAVVFFCFFYTALMYNPREVADNLKRSGAFIPGIRPGEQTA 358
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
+Y+ + +G + +A S + N F +G TS+LI+V +++
Sbjct: 359 KYIDGVLTRLTLFGAMY---IAAVSLFPQFLMVAGNVPFYLGGTSLLIVVVVVMDFMAQV 415
Query: 434 QAY 436
Q++
Sbjct: 416 QSH 418
>gi|408906901|emb|CCM12419.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Helicobacter
heilmannii ASB1.4]
Length = 419
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 208/428 (48%), Gaps = 42/428 (9%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-----AE 79
I ++ +T + + R+ ++P+PG D I F S S + LG F A
Sbjct: 2 NKAIATKILITLGYLFLYRVLAYVPIPGVDLAAIKS---FFDSNSSNALGLFNMFSGNAV 58
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+LS LGI P I +SI+M++L P+L +++KE DG +K + + ++G +++A
Sbjct: 59 SRLSIISLGIMPYITSSIIMELLSATFPNLAKMKKER-DGMQKYMQIVRYATIGITVIQA 117
Query: 140 VIVACYSLPYSIYAASHSVK---------HVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
V S+ + + + H +++ F ++ G M + WI + I++ G G G
Sbjct: 118 V-----SVSFGLRSIGHGHNGAIMVPMQTFLLIATFSMLTGTMLLMWIGEQITQRGVGNG 172
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKV 249
SLII GI++G + + L+ + V ++G++ V + T++A++ E R++
Sbjct: 173 ISLIIFAGIVSGIPHAIAGTFN-LVNTGVINVLVLIGIV-VIVLATIFAIIYVELAERRI 230
Query: 250 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 309
+ Y A + + YIP +N SG+ P + + LL FPS + +
Sbjct: 231 PISY-----ARKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASALLVFPSTILQASSNKIL 285
Query: 310 QHVKEILNPETSVGARPWVYYTIYAFFVFLFN--IFDIANLPKEIADYLNKMGARIPNVK 367
Q + + LNP A + + + FF + ++ IF+ K+IAD L + G I ++
Sbjct: 286 QAIADFLNPHGY--AYNILMFLLIIFFAYFYSSIIFN----AKDIADNLKRSGGFIAGLR 339
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 427
PG+ T +L + + FWG L L++++T IL ++ + F G T+VLI+V I
Sbjct: 340 PGEGTANFLNTVASRLTFWGSLYLALISTLPWIL---VKAMGVPFYFGGTAVLIVVQVAI 396
Query: 428 ELRRSYQA 435
+ + +A
Sbjct: 397 DTMKKIEA 404
>gi|312135477|ref|YP_004002815.1| preprotein translocase, secy subunit [Caldicellulosiruptor
owensensis OL]
gi|311775528|gb|ADQ05015.1| preprotein translocase, SecY subunit [Caldicellulosiruptor
owensensis OL]
Length = 435
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 217/438 (49%), Gaps = 48/438 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GAELK 81
++RR++ T +I++ R+G FIP+P DR D L+ V + LG F G
Sbjct: 13 DLRRKILFTLFMILVFRLGAFIPVPYIDR-----DALAKVINDLTMLGFFDVVAGGTFKN 67
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F + ++P I +SI+MQ+L +P+L +L K+G +G +K+ W G AIL
Sbjct: 68 MSIFAMSVTPYINSSIIMQLLTIAIPALEELAKQGEEGRKKLAE---WTRYGTAILA--F 122
Query: 142 VACYSLPYSIYAASHSVKHV-MVTA----FL--------LVCGAMTMSWICDTISESGFG 188
+ + + + A+ V ++TA FL L G + + WI + I+E+G G
Sbjct: 123 IQAIGIYFGLKNATALTNGVPVITAQGQGFLGFITITVTLTAGTVFLMWIGEQITENGIG 182
Query: 189 QGSSLIICVGILTGYTE---TLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G SL+I GI++ +L+ +++L S+ +L + + + ++ +V+ EG
Sbjct: 183 NGISLLIFAGIISRLPNGVVSLWNYVAKLNEFSLTSIIAVLLFIVMALAIIVFIIVIQEG 242
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL- 304
R++ +QY A +IP +N +G+ P++ L+ P+ +A
Sbjct: 243 ERRIPVQY-----AKRVVGRRVYGGQSTHIPIKVNIAGVIPIIFAISLVMLPTTIAQFFP 297
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGAR 362
S F++ VK + + W Y YA F+ F F A + P EIA+ L G
Sbjct: 298 NSGFYKFVKAYFSSGSF-----W-YTFFYALFIIGFTYFYTAIVFNPVEIANNLKNNGGF 351
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILD-HYLRRINEGFSIGFTSVLI 421
IP ++PGK T++++T++ + F G L L+ +A T++ + ++N F G TS+LI
Sbjct: 352 IPGIRPGKPTVDFITRVLSKVTFAGALFLAFIAILPTLVGLMFKHQLNIYF--GGTSLLI 409
Query: 422 IVGSIIELRRSYQAYNVM 439
+VG +E R +A +M
Sbjct: 410 VVGVALETIRQMEAQMLM 427
>gi|395241939|ref|ZP_10418939.1| Preprotein translocase subunit secY [Lactobacillus pasteurii CRBIP
24.76]
gi|394480687|emb|CCI85179.1| Preprotein translocase subunit secY [Lactobacillus pasteurii CRBIP
24.76]
Length = 431
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 215/430 (50%), Gaps = 27/430 (6%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
S L NA F EIR +++ T ++++ RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIWFTLFILLLYRIGSNITVPGVNAKAITQVAQTGLVPMLDTV 59
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K W++L
Sbjct: 60 TGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRWLTL 118
Query: 133 GFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VIAFVQSIGITLGFNALTQMGLVKNQTPQTYIEIAIIMTGGTMLLNWLGDEITDKGLGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 245
S+II GI+ + ++++ ++ + +S RW F + ++ IV V +
Sbjct: 179 VSVIIFAGIIARFPAGMWQIYNEEIINTSASDRWQGILFFIAVIVAILIVVQLVTWVEQA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVL-TTTYLLAFPSILASIL 304
R++ +QY + I+ E ++P +N SG+ PV+ +++++ +IL +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIITPATILMAFQ 289
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGAR 362
+ Q +++ S+ P V IY + LF F + P+++A+ L K GA
Sbjct: 290 RTQGDQQWYKVMTNIFSMQTTPGVI--IYTLLIILFTFFYAFVQVNPEKLAENLQKQGAY 347
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP+V PGK T +Y++K+ G + L ++A + + + + +G TS+LI+
Sbjct: 348 IPSVWPGKDTQDYVSKLLIRLSTVGSVFLGLVALLPQLATN-IWDLPSSIGLGGTSLLIV 406
Query: 423 VGSIIELRRS 432
+G ++EL R
Sbjct: 407 IGVVLELSRQ 416
>gi|167759842|ref|ZP_02431969.1| hypothetical protein CLOSCI_02205 [Clostridium scindens ATCC 35704]
gi|336421075|ref|ZP_08601235.1| preprotein translocase, SecY subunit [Lachnospiraceae bacterium
5_1_57FAA]
gi|167662461|gb|EDS06591.1| preprotein translocase, SecY subunit [Clostridium scindens ATCC
35704]
gi|336002434|gb|EGN32543.1| preprotein translocase, SecY subunit [Lachnospiraceae bacterium
5_1_57FAA]
Length = 438
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 207/430 (48%), Gaps = 26/430 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GA 78
++F +IR+++ T +++++ RIG +P PG D I Q + + + F G+
Sbjct: 7 KAFHIKDIRKKIGYTFLMLIVIRIGSQLPTPGVDSNYIQQFFAQNTGEAFNLFNAFTGGS 66
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S F L I+P I +SI+MQ+L +P L +++KEG DG +KI + ++++ A++E
Sbjct: 67 FEQMSIFALSITPYITSSIIMQLLTIAIPKLEEMQKEGEDGRKKIVAITRYLTVALALIE 126
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
++ +A ++ + + L G+ + WI + I+E G G G S+++ +
Sbjct: 127 SLAMAV-GFGRQGLLVEYNFVNAAIVVLTLTAGSAFLMWIGERITEKGVGNGISIVLVIN 185
Query: 199 ILTGYTETLYKMLSQLLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
I++ + + Q + ++ +L + + ++ V++ G R++ +QY
Sbjct: 186 IISRIPSDMTALFEQFVKGKPIASAALAVVIILAIIIALVVFVVILQSGERRIAVQYSQ- 244
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL----GSPFWQHV 312
K+A T IP +N +G+ P++ + L+ FP ++AS + GS +
Sbjct: 245 KVAGRRTYGGQSTN----IPLKVNTAGVIPIIFASSLMQFPVVIASFMRKGNGSGIGSEI 300
Query: 313 KEILNPETSVGARP----W---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
LN W +Y + FF + + I P EIA+ + K G IP
Sbjct: 301 LRGLNQSNWCNPEQLKYTWGLILYIVLTVFFAYFYT--SITFNPLEIANNMKKSGGFIPG 358
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PGK T+EYLTKI F G L ++ + + +L S G TS++IIV
Sbjct: 359 IRPGKPTVEYLTKILNYIIFIGACGLVLVQVVPILFNGWL---GAKVSFGGTSLIIIVSV 415
Query: 426 IIELRRSYQA 435
++E + ++
Sbjct: 416 VLETLKQIES 425
>gi|229489416|ref|ZP_04383279.1| preprotein translocase, SecY subunit [Rhodococcus erythropolis
SK121]
gi|453068383|ref|ZP_21971662.1| preprotein translocase subunit SecY [Rhodococcus qingshengii BKS
20-40]
gi|229323513|gb|EEN89271.1| preprotein translocase, SecY subunit [Rhodococcus erythropolis
SK121]
gi|452766033|gb|EME24284.1| preprotein translocase subunit SecY [Rhodococcus qingshengii BKS
20-40]
Length = 439
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 200/427 (46%), Gaps = 54/427 (12%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--------GA 78
++RR++ T L+ + R+G IP PG D + Q ++ S D G + GA
Sbjct: 13 DLRRKILFTLGLVALYRVGALIPSPGVDYGRVRQ--CIDIANSGDSAGIYSLINLFSGGA 70
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
L++S F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+ AIL+
Sbjct: 71 LLQMSIFAIGIMPYITASIIVQLLTVVIPKFEELRKEGQSGQAKMTQYTRYLSIALAILQ 130
Query: 139 AV-IVACYSLPYSIYA-----ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
+ IVA + + A S+ +++ ++ GA + W + I+E G G G S
Sbjct: 131 STGIVALAARGQLLQGCDDIIADKSIFGLVIIVLVMTAGAAMVMWFGEVITERGVGNGMS 190
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKL 251
L+I GI + +L P + + + ++ + VV V +G R++ +
Sbjct: 191 LLIFAGIASRIPSEGKAILDS-------RGPLVFAFVCLAALLIIAGVVFVEQGQRRIPV 243
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----- 306
QY + S Y+P +N +G+ PV+ + LL P+++A + +
Sbjct: 244 QYAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLIAQLTSASTAVD 298
Query: 307 -PFWQHVKE--ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGA 361
+WQ + ++NP A P VY IY + F F +A P+E AD + K G
Sbjct: 299 PSWWQRLINTYLVNP-----ANP-VYIAIYFGLIVFFTYFYVAITFNPEERADEMKKFGG 352
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEG-----FSIGF 416
IP ++PG+ T +YL + + G + L +A +L + I G G
Sbjct: 353 FIPGIRPGQPTADYLNYVLSRITLPGAIYLGTIA----VLPNLFLDIGNGGGAQNLPFGG 408
Query: 417 TSVLIIV 423
T+VLI+V
Sbjct: 409 TAVLIMV 415
>gi|270291113|ref|ZP_06197336.1| preprotein translocase, SecY subunit [Pediococcus acidilactici 7_4]
gi|304385394|ref|ZP_07367739.1| preprotein translocase subunit SecY [Pediococcus acidilactici DSM
20284]
gi|418069671|ref|ZP_12706948.1| preprotein translocase subunit SecY [Pediococcus acidilactici
MA18/5M]
gi|427439355|ref|ZP_18924010.1| preprotein translocase, SecY subunit [Pediococcus lolii NGRI 0510Q]
gi|270280509|gb|EFA26344.1| preprotein translocase, SecY subunit [Pediococcus acidilactici 7_4]
gi|304328601|gb|EFL95822.1| preprotein translocase subunit SecY [Pediococcus acidilactici DSM
20284]
gi|357536202|gb|EHJ20233.1| preprotein translocase subunit SecY [Pediococcus acidilactici
MA18/5M]
gi|425788191|dbj|GAC44798.1| preprotein translocase, SecY subunit [Pediococcus lolii NGRI 0510Q]
Length = 432
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 205/421 (48%), Gaps = 38/421 (9%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSF 84
+IR ++F T ++++ R+G +I +PG + + Q S SG V L F G S
Sbjct: 13 DIRHKIFFTLGILIVFRLGSYITVPGVNAHAL-QSISS--SGLVGILNTFSGGGLTNYSI 69
Query: 85 FQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV-IV 142
F +G+SP I A I++Q+L IVP V+ K+G G K+ W+++ A +++ I
Sbjct: 70 FAMGVSPYITAQIIVQLLQMDIVPKFVEWSKQGEVGRRKLNQATRWLTIVLAFAQSIGIT 129
Query: 143 ACYS-LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL- 200
A ++ L + +V + +L G M +W+ D I+E G GQG S+II GI+
Sbjct: 130 AGFNYLSQMNLVETPNVHTFLTIGLILTAGTMLTTWLGDMITERGIGQGVSMIIFAGIIA 189
Query: 201 ---TG----YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
TG YTE G S + + LL V IV ++ V + RK+ +QY
Sbjct: 190 RTPTGIQQIYTEQFVNTPKSQWGQSFLYVGLI--LLAVLAIV-IFVTWVQQASRKIPIQY 246
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL----ASILGSPFW 309
+ AS A + S Y+P +N +G+ PV+ + ++ P + AS W
Sbjct: 247 T--RRASGASDSS-------YLPLKVNVAGVIPVIFASSFISTPQTILMAFASSHSEDDW 297
Query: 310 QHV-KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKP 368
++ + N +T+ GA + YT+ F F N P+++A+ L K G+ IP V P
Sbjct: 298 YNILTNVFNMQTTDGA---ILYTVLIVLFTFFYAFVQVN-PEKLAENLQKQGSYIPGVWP 353
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
GK T Y++ + G L L ++A +L + ++E +G TS+LI+VG I+
Sbjct: 354 GKKTQSYVSSLLIRLSVVGALFLGLVALIP-LLASNIFGLDESIGLGGTSLLIVVGVAIQ 412
Query: 429 L 429
L
Sbjct: 413 L 413
>gi|338999009|ref|ZP_08637664.1| preprotein translocase subunit SecY [Halomonas sp. TD01]
gi|338764030|gb|EGP19007.1| preprotein translocase subunit SecY [Halomonas sp. TD01]
Length = 443
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 205/427 (48%), Gaps = 39/427 (9%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVDELGDF-----GA 78
SE+ RL + IV+ RIG IP+PG I D L+ F LG F GA
Sbjct: 15 SELWARLRFVLLAIVVYRIGAHIPVPG-----INPDQLAALFREQQGTILGMFNMFSGGA 69
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI+MQ++ + P L QL+KEG G KI Y + ++ A ++
Sbjct: 70 LERMSVLALGIMPYISASIIMQLMTAVSPHLEQLKKEGEAGRRKISQYTRYGTVLLAFVQ 129
Query: 139 AVIVACYSLPYSI-YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
A ++ I Y+A S V F V GA+ M W+ + I+E G G G SL+I
Sbjct: 130 ATGMSVGLASQGIAYSADFSFFFTAVITF--VSGAVFMMWLGEQITEKGIGNGISLLIFA 187
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQYYGF 256
GI+ G + + +L + W L L V I T+ VV E G R++K+ Y
Sbjct: 188 GIVAGLPSAVGQAF-ELARNEGAWNVLPLLALSVLGIATVAFVVFIERGQRRLKVNYPRR 246
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHV 312
++ + Y+P +N +G+ P + + +L FP+ + +G+ + Q
Sbjct: 247 QVGNKMYAGQ-----SSYLPLKVNMAGVIPAIFASSILLFPASIGQWVGAGEGMEWLQRA 301
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGK 370
+ L P +P +Y ++A V F F A + PK++AD L K GA +P ++PG+
Sbjct: 302 SQALGP-----GQP-LYILLFAAAVVFFCFFYTALVFNPKDVADNLKKSGAFLPGIRPGE 355
Query: 371 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIEL 429
T Y+ K+ +G L + T+ +++ +L N F G TS+LI+V I++
Sbjct: 356 QTARYIDKVMTRLTLFGALYI----TAVSLMPQFLIVAWNVPFFFGGTSLLIVVVVIMDF 411
Query: 430 RRSYQAY 436
Q++
Sbjct: 412 MAQVQSH 418
>gi|147676675|ref|YP_001210890.1| preprotein translocase subunit SecY [Pelotomaculum
thermopropionicum SI]
gi|146272772|dbj|BAF58521.1| preprotein translocase subunit SecY [Pelotomaculum
thermopropionicum SI]
Length = 419
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 206/427 (48%), Gaps = 36/427 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS-----GSVDELGDFGAEL 80
SE++ +L T +I I R+G +P+PG + P + VS G D + GA
Sbjct: 12 SELKAKLLYTLGMIFIFRLGAHVPVPGVN----PDKFAELVSSGLIFGFFDVISG-GALK 66
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA- 139
S F + I+P I ASI+MQ+L ++P L +L KEG +G +KI Y ++++ A ++
Sbjct: 67 NFSVFAMSITPYINASIIMQLLTVVIPHLERLAKEGEEGRKKITEYTRYLTVLLAFIQGL 126
Query: 140 --VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
V+ SL + +VM TA + G + W+ + I+E G G G SL+I
Sbjct: 127 GMVVGVKGSL-----VQPGPLTYVM-TALTITAGTTFLMWVGEQITEKGIGNGISLLIFA 180
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 257
GI++ + + +++ L ++ ++ L+ + +V V V EG R++ +QY K
Sbjct: 181 GIVSRVPQGVARVIEYLNAGTINILS-IIALVVIGALVIAGVVAVQEGQRRIPVQYA--K 237
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 317
R T ++P +N +G+ PV+ + LL FP LA W N
Sbjct: 238 RVVGRRIYGGQTT---HLPLRVNQAGVIPVIFASSLLMFPETLAR------WFSNTAAAN 288
Query: 318 PETSVGARPWVYYTI-YAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIE 374
+TI YA + F F A + P ++AD + K G IP ++PG+ T E
Sbjct: 289 FYVRYFGWGTAAHTIFYALLIIAFTYFYTAVIMNPADVADNIKKYGGFIPGLRPGRPTAE 348
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
Y+++I + +G + L+++A + R N F G T++LI+VG ++ + +
Sbjct: 349 YISRIMSRVTLFGAIFLALIAILPNFVLLATRIPNIYF--GGTALLIVVGVALDTMKQVE 406
Query: 435 AYNVMPS 441
A+ +M S
Sbjct: 407 AHLLMRS 413
>gi|302036685|ref|YP_003797007.1| preprotein translocase, membrane subunit SecY [Candidatus
Nitrospira defluvii]
gi|300604749|emb|CBK41081.1| Preprotein translocase, membrane subunit SecY [Candidatus
Nitrospira defluvii]
Length = 437
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 205/428 (47%), Gaps = 32/428 (7%)
Query: 21 ESFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
++ FK E+R R+ T ++++ R+G IP PG + + D+L G++ D
Sbjct: 10 QNIFKIPELRTRVLFTLGMLIVYRVGAHIPTPGINGEAL-SDFLQKQGGALLGFLDIFSG 68
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
G+ +L+ F LGI P I ASI++Q+L ++P L +L KEG G +KI Y + ++ A+
Sbjct: 69 GSLSRLTIFALGIMPYISASIILQLLTVVIPHLSKLAKEGERGRKKIIQYTRFGTIVIAL 128
Query: 137 LE--AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLI 194
++ + V + + S +T L G + W+ + I+E G G G SLI
Sbjct: 129 IQGFGIAVGLEQMNQGAFVLSPGWGFRFMTVITLCAGTGFLMWLGEQITERGIGNGISLI 188
Query: 195 ICVGILT------GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
I GI+ T LYK + QL +P ++ L + V V + G RK
Sbjct: 189 IFAGIVARLPAAVAQTFDLYK-VGQL------SFPLLVVLTLIMFGVVAAIVFLESGRRK 241
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
V +QY A +IP IN +G+ P + + ++AFP+ +A +P+
Sbjct: 242 VPVQY-----AKRVIGRRVYGGQSTHIPLKINTAGVIPPIFASSIIAFPATIAGFFETPW 296
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKP 368
+ V L P + + +Y + FF F + + P ++AD L K G +P ++P
Sbjct: 297 IKAVGSQLAPGSLL--YTLMYVGLIVFFCFFYT--AVVMNPVDMADNLKKYGGFVPGIRP 352
Query: 369 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 428
G+ T +Y+ + F G + L+I+ I + + ++N F G TS+LI++G ++
Sbjct: 353 GQRTSDYIYSVLTKITFAGAIYLAIVC---VIPEFLIYKLNMPFYFGGTSLLIVIGVGLD 409
Query: 429 LRRSYQAY 436
+ +++
Sbjct: 410 TAQQIESH 417
>gi|290968224|ref|ZP_06559767.1| preprotein translocase, SecY subunit [Megasphaera genomosp. type_1
str. 28L]
gi|335050133|ref|ZP_08543113.1| preprotein translocase, SecY subunit [Megasphaera sp. UPII 199-6]
gi|290781706|gb|EFD94291.1| preprotein translocase, SecY subunit [Megasphaera genomosp. type_1
str. 28L]
gi|333761765|gb|EGL39297.1| preprotein translocase, SecY subunit [Megasphaera sp. UPII 199-6]
Length = 420
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 212/449 (47%), Gaps = 58/449 (12%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L N E R+R T ++ VI R+G IP+PG D +I F SG++ L
Sbjct: 1 MLENLQNVMNVPEFRKRAVFTLIMFVIFRLGVHIPVPGVDSSVIEN---LFSSGNLFGLL 57
Query: 75 DF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWIS 131
D GA K S + I+P I ASI+MQ+L +VP+ Q K+ DG +KI+ + +
Sbjct: 58 DLFSGGALSKFSILAMSITPYINASIIMQLLTSVVPTFEQWAKDNQDGRDKIQKVTRYGT 117
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+ A+++A+ ++ Y+L + S V++ +L G + W+ D I+ G G G
Sbjct: 118 VVLAVIQALAMS-YALKVNGALMVDSWTMVLMVTVILTAGTCFLMWLGDQITAGGIGNGI 176
Query: 192 SLIICVGILTGY---TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
SLII GI+ + T+YK + GS + + ++ +F I + V VT+G R+
Sbjct: 177 SLIIFAGIVARFPNGCSTVYKYIQA--GSINIFQAVLFIIIALFMIAVV--VEVTQGQRR 232
Query: 249 VKLQY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
V +QY G K+ +IP +N +G+ P++ + +L FP +A
Sbjct: 233 VTVQYAKRIVGRKMYGGH---------STHIPLKVNQAGVIPLIFASSVLMFPVTIAQ-- 281
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYT---IYAFFVFLFNIFDIA---NLPKEIADYLNK 358
F Q+ + G W T +YA +F F F A N+P ++ + + K
Sbjct: 282 ---FSQNA----TIKMIAGWFAWGTATNTVLYAVLIFFFTYFYTAISLNIP-QLTENMQK 333
Query: 359 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN--EGFSIGF 416
G IP ++PG+ T +++ +I G L+ +A IL +++ I +G G
Sbjct: 334 YGGFIPGIRPGQPTAKHIDRIMTRITLAGAFFLAFVA----ILPNFIGWITGVQGVYFGG 389
Query: 417 TSVLIIVGSIIE---------LRRSYQAY 436
T++LI+VG I+ L R YQ +
Sbjct: 390 TALLIVVGVAIDTMKQAESLVLNRQYQGF 418
>gi|381402107|ref|ZP_09926988.1| preprotein translocase subunit SecY [Kingella kingae PYKK081]
gi|380832916|gb|EIC12803.1| preprotein translocase subunit SecY [Kingella kingae PYKK081]
Length = 409
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 202/415 (48%), Gaps = 40/415 (9%)
Query: 39 IVISRIGYFIPLPGFDRRLIPQDYLSFV-SGSVDELGDF--GAELKLSFFQLGISPQIVA 95
+++ RIG +P+PG D + + Y + SG + L F G+ + S F +GI P I A
Sbjct: 5 LIVFRIGAHVPVPGVDAAALAKLYQNVAGSGILGMLNMFSGGSLERFSIFAIGIMPYISA 64
Query: 96 SILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAAS 155
SI+MQ+ IVPSL L+KEG G + I Y ++ A +++ VA + L ++
Sbjct: 65 SIIMQLAGEIVPSLKALKKEGDAGRKIITKYTRIGTVFLATAQSIGVAKFVLQQNVVVIP 124
Query: 156 HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKM--LSQ 213
+++ + T LV G M + W+ + I+E G G G SL+I GI+ G ++ L+
Sbjct: 125 -AMEFYISTISCLVGGTMFLMWLGEQITERGLGNGISLLITAGIIAGVPSGAIQLWTLAT 183
Query: 214 LLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC-RKVKLQYYGFKLASAAREDSPITEVE 272
G + +LGLLG+ +AVV E RK+ + Y A R+ +
Sbjct: 184 SSGMPLTAVGIVLGLLGM-----TYAVVYFESAQRKIPIHY-------AKRQFGGLDSQN 231
Query: 273 PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPE-------TSVGAR 325
++PF +N +G+ P + + ++ FPS+ AS G+ NP T++
Sbjct: 232 THMPFKLNMAGVIPPIFASSIIMFPSMFASWFGTD---------NPNSWFAKILTALQHG 282
Query: 326 PWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQAST 383
Y ++A + F F +A PKE+A+ L K GA +P ++PG+ T +YL +
Sbjct: 283 QPAYIVLFAITIIFFCYFYTALAFSPKEMAENLKKSGAFVPGIRPGEQTAQYLENVVLCL 342
Query: 384 RFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNV 438
F+G L ++++ +L + F +G TS+LI+V ++ +Y V
Sbjct: 343 TFFGALYITVICLIPELLTAF---AGIPFYLGGTSLLILVVVTMDFNTQLTSYRV 394
>gi|445432096|ref|ZP_21439001.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC021]
gi|444759156|gb|ELW83639.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC021]
Length = 440
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 209/432 (48%), Gaps = 42/432 (9%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 11 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 66
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 67 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 126
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
AV + C L S + + L+ G M + W+ + I+E G G G S+II G
Sbjct: 127 AVGM-CAGLIGQGITLSTGLAFYIPAVTSLIAGTMFLMWLGEQITERGIGNGISMIIFAG 185
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 255
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 186 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 239
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP-------- 307
A + T + ++P IN +G+ P + + LL FP+ L +GS
Sbjct: 240 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIK 296
Query: 308 -FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIP 364
Q + +L+P +P +Y ++ + F F A + PKE+++ L + GA +P
Sbjct: 297 RSLQDLALVLSP-----GQP-LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVP 350
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
++PG+ T YL I F G + ++++ IL F +G TS+LI+V
Sbjct: 351 GIRPGEQTARYLDHILNRLTFIGAIYITVICLMPMILQ---SSFGIPFYLGGTSLLIVVV 407
Query: 425 SIIELRRSYQAY 436
+++ QA+
Sbjct: 408 VVMDFMAQLQAH 419
>gi|347730676|ref|ZP_08863790.1| preprotein translocase, SecY subunit [Desulfovibrio sp. A2]
gi|347520595|gb|EGY27726.1| preprotein translocase, SecY subunit [Desulfovibrio sp. A2]
Length = 437
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 200/430 (46%), Gaps = 45/430 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E+R++LF T +L+ RIG +P+PG D + D+ + V ++ L D G LS
Sbjct: 14 ELRKKLFWTFLLLAAYRIGVHVPVPGVDSGAL-ADFFASVQNTLFGLFDMFSGGGLRNLS 72
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILEAVIV 142
F LGI P I ASI++Q+L + P L ++ KE G G KI Y + ++ +++ +
Sbjct: 73 VFALGIMPYISASIIIQLLQVVSPELKRMAKEEGASGRRKITQYTRYATVLITVIQGFGI 132
Query: 143 AC-----YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
A +S + M+T L G + + WI + I+E G G G SLII
Sbjct: 133 AVGLENMHSPAGAPVVVDAGWAFRMITIATLTAGTVLIMWIGEQITEKGIGNGISLIIFS 192
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWA---------VVVTEGCRK 248
GI+ G + K +QL+ + G + +FT + + V + G R+
Sbjct: 193 GIVAGIPGGIVKS-AQLIKA---------GDMSLFTALLVLVLMAVVLGCIVFMERGQRR 242
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ + Y ++ ++P IN +G+ P + + LL FP+ +AS +
Sbjct: 243 IPIHYAKRQVGRKMFGGQ-----STHLPLRINTAGVIPPIFASSLLLFPATIASFSANEM 297
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFN--IFDIANLPKEIADYLNKMGARIPNV 366
Q V P T + ++ ++ FF F + IFD PK+IA+ L K G IP +
Sbjct: 298 LQQVAAWFAPHTVM--YNILFISLIVFFCFFYTAIIFD----PKDIAENLKKGGGFIPGI 351
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PG T +Y+ ++ WG + +S + IL + + N F G TSVLI+VG
Sbjct: 352 RPGDKTRQYIDRVLTRMTIWGAIYISAICVLPMIL---IAQFNVPFYFGGTSVLILVGVA 408
Query: 427 IELRRSYQAY 436
++ +++
Sbjct: 409 MDFMSQVESH 418
>gi|225387218|ref|ZP_03756982.1| hypothetical protein CLOSTASPAR_00970 [Clostridium asparagiforme
DSM 15981]
gi|225046697|gb|EEG56943.1| hypothetical protein CLOSTASPAR_00970 [Clostridium asparagiforme
DSM 15981]
Length = 438
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 213/438 (48%), Gaps = 42/438 (9%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLS--FVSGSVDELGDFGA 78
+F E++ +L T +++V+ R G +P+PG + D+ + F + D G F A
Sbjct: 7 NAFKVKELKNKLLYTFMMLVVIRFGSALPIPG-----VRTDFFANWFAKQTTDVFGFFNA 61
Query: 79 EL-----KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
++S F L I+P I +SI++Q+L +P L +L+K+G DG +KI+ Y ++++G
Sbjct: 62 MTGGSFSQMSIFALSITPYITSSIIIQLLTIAIPKLEELQKDGEDGRKKIQEYTRYVTVG 121
Query: 134 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
A++E+ +A A ++ +V+V + G+ + WI + I++ G G G S+
Sbjct: 122 LALIESSAMAI-GFGRQGLLADYNAWNVIVAIVTMTTGSALLMWIGEQITDKGVGNGISI 180
Query: 194 IICVGILTGYTETLYKMLSQ-LLGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKL 251
++ + IL+ + + + + G + L + + V + ++ +V+ + R++ +
Sbjct: 181 VLLLNILSSVPSDIRNLYFKFVFGQDIPMAALRLAIVVLVIVAMVVFVIVLNDAERRIPV 240
Query: 252 QY----YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
QY G KL IP +N +G+ PV+ + +++FP +++ + P
Sbjct: 241 QYSKKMVGRKLVGGQASS---------IPLKVNTAGVMPVIFASSIMSFPVVISQFI--P 289
Query: 308 FWQ-----HVKEILNPETSVGARPWVY---YTIYAFFVFLFNIF--DIANLPKEIADYLN 357
Q H+ ++LN + +Y +Y + LF F IA P E+A+ +
Sbjct: 290 AMQQGWSGHLMKLLNSGSWCRPSEPIYSIGLLVYIILIVLFAYFYTSIAFNPLEVANNMK 349
Query: 358 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 417
K G IP ++PGK T EYL KI F G + L ++ I FS T
Sbjct: 350 KQGGFIPGIRPGKPTSEYLNKILNYIVFIGAVGLIVVCVVPVIFSGLFDMSRISFS--GT 407
Query: 418 SVLIIVGSIIELRRSYQA 435
S++IIVG ++E ++ ++
Sbjct: 408 SLIIIVGVVLETIKAIES 425
>gi|452955117|gb|EME60517.1| preprotein translocase subunit SecY [Amycolatopsis decaplanina DSM
44594]
Length = 435
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 203/438 (46%), Gaps = 45/438 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
++R+++ T ++ + RIG IP PG + Q + V +L + GA L+LS
Sbjct: 13 DLRKKILFTLAIVAVYRIGATIPAPGISYSAVQQCTETGSQEGVYQLLNLFSGGALLQLS 72
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++ A+L+A V
Sbjct: 73 LFSTGIMPYITASIIVQLLTVVIPRFEELKKEGQAGQGKLTQYTRYLTIALAVLQATGVV 132
Query: 144 CYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
+ ++ +SV + + + G M W+ + I+E G G G S++I
Sbjct: 133 ALADRKQLFPQCDTAIIPDNSVYTLAIIVITMTAGTAVMMWLGELITERGVGNGMSVLIF 192
Query: 197 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYG 255
+ I +LS G + L+ VF +V + +V+ V +G R++ +QY
Sbjct: 193 LNIAARIPIEGGNILSSAGG-------VVFALICVFGLVIIASVIFVEQGQRRIPVQYAK 245
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 315
+ + Y+P +N +G+ PV+ + LL P +++ ++G ++
Sbjct: 246 RMIGRRMYGGT-----STYLPIKVNQAGVIPVIFASSLLYLPDLISRLVGDANSNAGWQV 300
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYLNKMGARIPNVKPGKAT 372
V W + +Y + F F I N+ E A+ + K G IP ++PG+ T
Sbjct: 301 FIQNYIVNQSSWAHVLLYFALIIFFTYFYITITFNV-DERAEEMKKFGGFIPGIRPGRPT 359
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-----NEGFSIGFTSVLIIVGSII 427
EYL+ + G L L I+A IL ++ + N+ F G T+VLI+VG +
Sbjct: 360 AEYLSYVLGRITLPGSLYLGIIA----ILPNFFLSVTGSGNNQNFPFGGTAVLIMVGVGL 415
Query: 428 E---------LRRSYQAY 436
+ ++R+Y+ +
Sbjct: 416 DTVKQIESQLMQRNYEGF 433
>gi|383753535|ref|YP_005432438.1| putative preprotein translocase SecY subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381365587|dbj|BAL82415.1| putative preprotein translocase SecY subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 418
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 203/419 (48%), Gaps = 27/419 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E+R+++ T ++ I R+G IP+PG D I Q F +G++ L D GA K S
Sbjct: 13 ELRQKITFTLIMFAIFRMGTHIPVPGVDPTAIEQ---LFANGNLFGLLDLFSGGAFSKFS 69
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F + I+P I A+I++Q+L ++P+L Q KEG +GH+K ++++ A L+A+
Sbjct: 70 IFAMSITPYINAAIIIQLLNVVIPTLEQWSKEGQEGHKKTTQVTRYLTVVLAFLQAI--- 126
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
S+ + S ++++ A L G + + W+ + I+ +G G G SLII GI+
Sbjct: 127 GMSIGLKAAILNPSPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVAAL 186
Query: 204 TETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
+ + + + ++ ++ FM L+ + +V + V V G R++ + Y A
Sbjct: 187 PKNIGTIYHYVQAGTISYFSVFMFALIAIAMVV--FVVHVENGFRRIPISYTKRVGARGT 244
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSV 322
+IP +N +G+ P++ + +L FP +A + P+ + V L
Sbjct: 245 YGGH-----SSHIPLKVNQAGVIPIIFASSVLMFPVTIAQFIEIPWVKTVASYLE----- 294
Query: 323 GARPWVYYTIYAFFVFLFNIFDIANLPK--EIADYLNKMGARIPNVKPGKATIEYLTKIQ 380
+P + T+Y + F F A K ++A+ L K G IP ++PG+ T +YL +
Sbjct: 295 WGKP-LQTTLYVGMIIFFTYFYTAVTVKISDMAENLKKYGGFIPGIRPGQPTADYLDHVM 353
Query: 381 ASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVM 439
G + L+ +A ++ +G G T++LI+VG ++ + +A VM
Sbjct: 354 TRITLAGSIFLAFIAVLPNMVAAATNI--QGVYFGGTALLIVVGVALQTMKQIEAMIVM 410
>gi|323490643|ref|ZP_08095848.1| preprotein translocase subunit SecY [Planococcus donghaensis
MPA1U2]
gi|323395735|gb|EGA88576.1| preprotein translocase subunit SecY [Planococcus donghaensis
MPA1U2]
Length = 431
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 200/421 (47%), Gaps = 24/421 (5%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI-PQDYLSFVSGSVDELGDFGAELKLSF 84
++IR ++F T ++++I RIG F+P+P D ++ D + V G ++ G GA S
Sbjct: 12 TDIRNKIFFTLLMLIIFRIGTFVPVPNVDASVLQATDQMGLV-GFLNTFGG-GALANFSI 69
Query: 85 FQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
+GI P I ASI++Q+L +VP + K+G G K+ + + ++ A ++A I
Sbjct: 70 LAMGIMPYITASIIVQLLQMDVVPKFAEWAKQGEVGRRKLAQFTRYFTIVLAFIQA-IGM 128
Query: 144 CYSLPYSIYAAS----HSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
Y +Y S ++ +V A +L G + W+ + I+ G G G S+II GI
Sbjct: 129 SYGFN-QMYGGSLIQNDTISTYVVIAIVLTGGTAFLLWLGEQITAKGVGNGISIIIFAGI 187
Query: 200 LTGYTETLYKMLSQLLGSSVRWWPF----MLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
+ + ++ +Q + + P M L +T+ + V + RK+ +QY
Sbjct: 188 VAAIPGAINQLYAQQIQGAGDQLPINLAIMALLALAVVAITVLVIYVQQALRKIPIQY-- 245
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-PFWQHVKE 314
A + + ++P +N +G+ PV+ + P +AS G+ F + ++
Sbjct: 246 --AKRVAGRGQSTSGQQTHLPLKVNAAGVIPVIFAVAFIITPQTIASFFGANAFTEAIQN 303
Query: 315 ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
+ VG +Y + F + + + P+ ++D L K GA IP ++PGK T +
Sbjct: 304 TFDYTRPVGM--IIYVALIVAFTYFYAFIQVN--PENVSDNLKKQGAYIPGIRPGKNTQD 359
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
YLT + F G + L+I+A + + + + IG TS+LI+VG +E + +
Sbjct: 360 YLTSVLYRLTFVGAIFLAIIAVLPIFFIN-VANLPQSAQIGGTSLLIVVGVALETMKQLE 418
Query: 435 A 435
+
Sbjct: 419 S 419
>gi|359782254|ref|ZP_09285476.1| preprotein translocase subunit SecY [Pseudomonas psychrotolerans
L19]
gi|359370047|gb|EHK70616.1| preprotein translocase subunit SecY [Pseudomonas psychrotolerans
L19]
Length = 428
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 205/427 (48%), Gaps = 36/427 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFD----RRLIPQDYLSFVSGSVDELGDFGAELK 81
SE+ RL + I++ RIG IP+PG + L Q+ + +S + + GA +
Sbjct: 2 SELWTRLRFLFLAIIVYRIGAHIPVPGINPDQLAALFRQNEGTILS--LFNMFSGGALER 59
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-- 139
+S F LGI P I ASI+MQ+L I P L QL+KEG G KI Y + +L A+++A
Sbjct: 60 MSIFALGIMPYISASIIMQLLTAISPQLEQLKKEGESGRRKISQYTRYGTLVLALVQATG 119
Query: 140 --VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
V +A + +S+ S V VT F V GA+ M W+ + I+E G G G S++I
Sbjct: 120 MSVGLASQGVAFSV---GFSFYFVAVTTF--VAGALFMMWLGEQITERGIGNGISMLIFA 174
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPF-MLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
GI+ G + + + + M+G++ V I + V + G R++ + Y
Sbjct: 175 GIVAGLPRAIGQSFESARQGDINIFALIMVGVVAVAIIA--FVVFIERGQRRIAVHY--- 229
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQHV 312
A + ++P +N +G+ P + + +L FP+ L S G + Q V
Sbjct: 230 --AKRQQGRKVFAAQNSHLPLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDV 287
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ + P + + I+ F + +F+ PK++A+ L K GA IP ++PG+ +
Sbjct: 288 AQAIAPGQPLNILLFSAGIIFFCFFYTALMFN----PKDVAENLKKSGAFIPGIRPGEQS 343
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVGSIIELRR 431
Y+ + +G L + T+ +L +L N F +G TS+LI+V +++
Sbjct: 344 ARYIDGVLTRLTMFGALYM----TAVCLLPQFLVVAANVPFYLGGTSLLIVVVVVMDFMS 399
Query: 432 SYQAYNV 438
Q++ V
Sbjct: 400 QVQSHLV 406
>gi|333898859|ref|YP_004472732.1| preprotein translocase subunit SecY [Pseudomonas fulva 12-X]
gi|333114124|gb|AEF20638.1| preprotein translocase, SecY subunit [Pseudomonas fulva 12-X]
Length = 442
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 204/427 (47%), Gaps = 36/427 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDF---GAELK 81
SE+ RL + I++ RIG IP+PG + RL D G++ L + GA +
Sbjct: 16 SELWARLRFLFMAIIVYRIGAHIPVPGINPDRL--ADLFRQNEGTILSLFNMFSGGALER 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA-- 139
+S F LGI P I ASI+MQ++ + P L QL+KEG G KI Y + +L A ++A
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTLVLAFVQAIG 133
Query: 140 --VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
V +A + +S+ H V VT F V GAM M W+ + I+E G G G S++I
Sbjct: 134 MSVGLASQGVAFSVDFGFH---FVAVTTF--VAGAMFMMWLGEQITERGVGNGISMLIFA 188
Query: 198 GILTGYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
GI+ G + + + + + +GLL V I + V + G R++ + Y
Sbjct: 189 GIVAGLPSAIGQSFESARQGDINIFALIAIGLLAVAII--GFVVFIERGQRRIAVHY--- 243
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQHV 312
A + ++P +N +G+ P + + LL FP+ L + G + Q +
Sbjct: 244 --AKRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSLLLFPASLGAWFGQSEGMGWLQDI 301
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ + P + + I+ F + +F+ PK++A+ L K GA IP ++PG+ +
Sbjct: 302 SQAIAPGQPLNILLFSAGIIFFCFFYTALMFN----PKDVAENLKKSGAFIPGIRPGEQS 357
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVGSIIELRR 431
Y+ + +G L + T+ +L +L N F +G TS+LI+V +++
Sbjct: 358 ARYIDGVLTRLTMFGALYM----TAVCLLPQFLVVAANVPFYLGGTSLLIVVVVVMDFMS 413
Query: 432 SYQAYNV 438
Q++ V
Sbjct: 414 QVQSHLV 420
>gi|226184477|dbj|BAH32581.1| preprotein translocase SecY subunit [Rhodococcus erythropolis PR4]
Length = 439
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 199/427 (46%), Gaps = 54/427 (12%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--------GA 78
++RR++ T L+ + R+G IP PG D + Q ++ S D G + GA
Sbjct: 13 DLRRKILFTLGLVALYRVGALIPSPGVDYGRVRQ--CIDIANSGDSAGIYSLINLFSGGA 70
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
L++S F +GI P I ASI++Q+L ++P +LRKEG G K+ Y ++S+ AIL+
Sbjct: 71 LLQMSIFAIGIMPYITASIIVQLLTVVIPKFEELRKEGQSGQAKMTQYTRYLSIALAILQ 130
Query: 139 AV-IVACYSLPYSIYA-----ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
+ IVA + + A S+ + + ++ GA + W + I+E G G G S
Sbjct: 131 STGIVALAARGQLLQGCDDIIADKSIFGLAIIVLVMTAGAAMVMWFGEVITERGVGNGMS 190
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKL 251
L+I GI + +L P + + + ++ + VV V +G R++ +
Sbjct: 191 LLIFAGIASRIPSEGKSILDS-------RGPLVFAFVCLAALLIIAGVVFVEQGQRRIPV 243
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----- 306
QY + S Y+P +N +G+ PV+ + LL P+++A + +
Sbjct: 244 QYAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYLPNLIAQLTSASTAVD 298
Query: 307 -PFWQHVKE--ILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGA 361
+WQ + ++NP A P VY IY + F F +A P+E AD + K G
Sbjct: 299 PSWWQRLINTYLVNP-----ANP-VYIAIYFGLIVFFTYFYVAITFNPEERADEMKKFGG 352
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEG-----FSIGF 416
IP ++PG+ T +YL + + G + L +A +L + I G G
Sbjct: 353 FIPGIRPGQPTADYLNYVLSRITLPGAIYLGTIA----VLPNLFLDIGNGGGAQNLPFGG 408
Query: 417 TSVLIIV 423
T+VLI+V
Sbjct: 409 TAVLIMV 415
>gi|289435878|ref|YP_003465750.1| preprotein translocase secY subunit [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289172122|emb|CBH28668.1| preprotein translocase secY subunit [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 431
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 220/441 (49%), Gaps = 44/441 (9%)
Query: 22 SFFK-SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAEL 80
+FFK ++IR+++ T ++VI RIG F+P+PG + + + G ++ + GA
Sbjct: 7 NFFKVADIRKKILFTLAMLVIFRIGTFVPVPGVNAAALQSSMDGGILGFLNTF-NGGALK 65
Query: 81 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
S F +G+ P I +SI++Q+L +VP L + K+G G +K+ ++++G ++EA
Sbjct: 66 NFSIFAMGVMPYITSSIIVQLLQMDVVPKLTEWSKQGEMGRKKLNQLTRYMTIGLGLVEA 125
Query: 140 VIVACYSLPYSIYAASH-------SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
+ + Y S S+ + A +L G M + W+ + I+ G G G S
Sbjct: 126 -----FGMAYGFNRMSSAGLIIEPSIGRYAIIAIVLTTGTMFLMWLGEQITVKGVGNGVS 180
Query: 193 LIICVGILTGYTETLYKM-LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVT-----EGC 246
+II GI+ + + ++ +SQ+ + + + +L L+GV V + A+VV +
Sbjct: 181 IIIFAGIVARIPDGVRQLYVSQIENAGDQLFLHILTLVGV--AVAILAIVVAVIFFQQAL 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL-- 304
RK+ +QY ++A A + + T ++P +N +G+ PV+ + + P + +
Sbjct: 239 RKIPIQYSK-RVAGAKQSGAQAT----HLPLKLNSAGVIPVIFASAFIITPQTILTFFDQ 293
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIP 364
+ + +K++ + +G +Y + F + + + P+++AD L K G IP
Sbjct: 294 SNDVVKVLKDVFDYTKPIGM--ILYVALIVAFTYFYAFIQVN--PEKVADNLKKQGGYIP 349
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVG 424
+ +PG+ T YLT + F G + LS +A TI + + + ++G TS+LI++G
Sbjct: 350 SKRPGRETQAYLTSVLYRLTFVGAIFLSAVAILPTI-GTTVFSLPQSLAVGGTSLLIVIG 408
Query: 425 SIIE---------LRRSYQAY 436
++ ++R+Y+ +
Sbjct: 409 VALDTTKQLEGQLVKRNYRGF 429
>gi|254461313|ref|ZP_05074729.1| preprotein translocase, SecY subunit [Rhodobacterales bacterium
HTCC2083]
gi|206677902|gb|EDZ42389.1| preprotein translocase, SecY subunit [Rhodobacteraceae bacterium
HTCC2083]
Length = 447
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 202/423 (47%), Gaps = 32/423 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLS 83
+++R R+ T L+++ R+G FIP+PG D + + S G + F GA ++
Sbjct: 14 TDLRNRILFTLGLLIVYRLGTFIPVPGIDGAALREFMESAGQGIGGMVSMFTGGALGRMG 73
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I ASI++Q+L +VP L QL+KEG G +KI Y + ++ A ++A
Sbjct: 74 IFALGIMPYISASIIVQLLTSMVPQLEQLKKEGQQGQKKINQYTRYGTVALATMQA---- 129
Query: 144 CYSLPYSIYAASHSVKHVM----VTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
Y L S+ A + + LV G M + W+ + I+ G G G SLII VGI
Sbjct: 130 -YGLAVSLEAGGLVTEGGLYFRAACLITLVGGTMFLMWLGEQITARGIGNGISLIIFVGI 188
Query: 200 LTGYTETLYKMLSQLLGSSVRWWP-FMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
+ L + + G S P ++G++ + + + V + RK+ +QY ++
Sbjct: 189 IAEVPAALAQFFAS--GRSGAISPAVIVGVILMVVVTIAFVVFMERALRKIHIQYPRRQV 246
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
+E S ++P +NP+G+ P + + LL P+ +++ G+ + +L
Sbjct: 247 GMRVQEGS-----SSHLPVKVNPAGVIPAIFASSLLLLPATISTFSGNSTGPVMSTLL-- 299
Query: 319 ETSVGARPWVYYTIYA----FFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIE 374
G +Y +A FF F + F+++ ++AD L +P V+PGK T E
Sbjct: 300 -AYFGPGQPLYLLFFAAMIVFFTFFYT-FNVSFKVDDVADNLKNQNGFVPGVRPGKKTAE 357
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSY 433
YL + + G L+++ +L +R + F G TSVLI+V ++ +
Sbjct: 358 YLEFVVSRLLVLGSAYLTLVC----LLPEIIRGQFAIPFYFGGTSVLIVVSVTMDTIQQV 413
Query: 434 QAY 436
Q++
Sbjct: 414 QSH 416
>gi|244539088|dbj|BAH83131.1| protein translocase subunit SecY [Candidatus Ishikawaella capsulata
Mpkobe]
Length = 433
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 200/400 (50%), Gaps = 28/400 (7%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSV-DELGDF-- 76
A++ S R LFV I+I RIG +IP+PG + ++ + L+ +G++ D L F
Sbjct: 2 AKTSLDSLKHRVLFVITA-IIIFRIGSYIPIPGINTTVLSK-LLNQQNGTIIDMLNMFSG 59
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA + S F LGI P I AS+++Q+L + P+L ++K+G G KI Y + +L AI
Sbjct: 60 GALSRASIFALGIMPYISASVIIQLLSIVNPTLADIKKDGEIGRLKINQYTRYSALALAI 119
Query: 137 LEAVIVACYSLP----YSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
L++V + +LP +H+++ ++ LV G + + W+ + +++ G G G S
Sbjct: 120 LQSVGITT-ALPKIAGIDNLIFNHNMQFYFISVMSLVTGTIFLMWLGEQLTDHGIGNGIS 178
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
++I GI+ + L + +++ +L ++ +F I+ + V V G R++ +
Sbjct: 179 ILIFTGIIASLPPAIGHTLERSRQGDLQFTELLLIVILIFAII-FFVVFVERGQRRIIVH 237
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
Y A + P + ++P IN +G+ P + + ++ FP+ +AS G + +
Sbjct: 238 Y-----AHRQQGRRPYYQPTSHLPLKINMAGVIPAIFASSIILFPATIASWFG----RSM 288
Query: 313 KEILNPETSVGARP------WVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNV 366
L + S+ +P +Y T FF F + + + N P++ AD L K GA IP +
Sbjct: 289 NNYLLTQISLYLQPGQLIYLLLYSTAIVFFCFFYTVL-VFN-PRDTADNLKKSGAFIPGI 346
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR 406
+PG+ T Y+ I G + ++ + I+ H ++
Sbjct: 347 RPGEKTARYIDTIMTRLTMIGAIYITFICLVPEIMRHAMK 386
>gi|293610844|ref|ZP_06693144.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827188|gb|EFF85553.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 440
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 208/427 (48%), Gaps = 32/427 (7%)
Query: 24 FKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF-----GA 78
++ IRR F+ L+V R+G IP+PG + + ++ G++ LG F GA
Sbjct: 11 YREIIRRMSFLIGALLVF-RLGAHIPVPGINNAAL-ENLFHANQGTI--LGLFNMFSGGA 66
Query: 79 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
++S LGI P I ASI++Q++ ++PSL L+KEG G KI Y +L A+++
Sbjct: 67 LERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGKRKINQYTRQGTLLLAVVQ 126
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
AV + C L S + + LV G M + W+ + I+E G G G S+II G
Sbjct: 127 AVGM-CAGLIGQGITLSVGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAG 185
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLL--GVFTIVTMWAVVVTEGC-RKVKLQYYG 255
I+ G L K++ Q + S ++GL+ G+ ++ + A+V E R++ + Y
Sbjct: 186 IVAG----LPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFIEKAQRRIPVNY-- 239
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS--PFWQHVK 313
A + T + ++P IN +G+ P + + LL FP+ L +GS P +K
Sbjct: 240 ---AQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGFIK 296
Query: 314 EILNPETSV--GARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 369
L V +P +Y ++ + F F A + PKE+++ L + GA +P ++PG
Sbjct: 297 SSLQDLALVLSPGQP-LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPG 355
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
+ T YL I F G + ++++ IL F +G TS+LI+V +++
Sbjct: 356 EQTARYLDHILNRLTFIGAIYITVICLMPMILQ---SSFGIPFYLGGTSLLIVVVVVMDF 412
Query: 430 RRSYQAY 436
QA+
Sbjct: 413 MAQLQAH 419
>gi|350563338|ref|ZP_08932160.1| preprotein translocase, SecY subunit [Thioalkalimicrobium
aerophilum AL3]
gi|349779202|gb|EGZ33549.1| preprotein translocase, SecY subunit [Thioalkalimicrobium
aerophilum AL3]
Length = 442
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 196/415 (47%), Gaps = 22/415 (5%)
Query: 30 RRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKLSFFQL 87
R LFV LIV R+G IP+P D + + +D F GA +LS L
Sbjct: 22 RLLFVLGALIVF-RLGTHIPVPSIDPIALAAMFEQQRGTVLDMFNMFSGGALERLSILAL 80
Query: 88 GISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSL 147
GI P I A+I+MQ+L + P+L QL+KEG G KI Y + ++ A +A+ V+
Sbjct: 81 GIMPYISAAIIMQLLTAVSPTLEQLKKEGEAGRRKITQYTRYGTVVLATFQAIGVSIALQ 140
Query: 148 PYSIYAASHSVKH---VMVTAFL-LVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
+I V MVTA + LV G + + W+ + I+E G G G SLII GI+ G
Sbjct: 141 AQNINGMPVVVNPGALFMVTAVVTLVSGTIFLMWLGEQITERGIGNGISLIIFAGIVAGL 200
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAR 263
L L Q+ ++ ++ LL + VT + V V G R++ +QY A R
Sbjct: 201 PSALGGTLEQVHTGALHAITVII-LLLLVAAVTAFVVFVERGQRRIPVQY-----AQRMR 254
Query: 264 EDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVG 323
E ++P +N +G+ P + + ++ FP+ L GS +++ + + T++
Sbjct: 255 GRKLYGGQEGHLPLKLNMAGVIPPIFASSIILFPASLGGWFGSS--ENMSWLKDIATTLA 312
Query: 324 ARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQA 381
+Y YA + F F A + PK+ AD L K GA +P ++PG T Y+ I
Sbjct: 313 PGQPLYIMFYALAIMFFCFFYTAIVFNPKDTADNLRKSGAFLPGIRPGPQTARYIDTIMG 372
Query: 382 STRFWGGLLLSILATSSTILDHYLRRI-NEGFSIGFTSVLIIVGSIIELRRSYQA 435
G ++ T+ +L +L N F G T++LIIV +++ QA
Sbjct: 373 RLTLAG----AVYITAVCLLPEFLILYWNVPFYFGGTALLIIVIVVMDFMTQIQA 423
>gi|209447387|pdb|2ZJS|Y Chain Y, Crystal Structure Of Secye Translocon From Thermus
Thermophilus With A Fab Fragment
gi|209447403|pdb|2ZQP|Y Chain Y, Crystal Structure Of Secye Translocon From Thermus
Thermophilus
Length = 434
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 196/433 (45%), Gaps = 26/433 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E+R+R+ T +++ R+G FIP PG D I Q++L G V + + G + S
Sbjct: 13 ELRQRVLFTLLVLAAYRLGAFIPTPGVDLDKI-QEFLRTAQGGVFGIINLFSGGNFERFS 71
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY--IWWISLGF---AILE 138
F LGI P I A+I+MQ+L +VP+L +L KEG +G I Y I I+LG L
Sbjct: 72 IFALGIMPYITAAIIMQILVTVVPALEKLSKEGEEGRRIINQYTRIGGIALGAFQGFFLA 131
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+ + + S V V G + W+ + I+E G G G+SLII G
Sbjct: 132 TAFLGAEGGRFLLPGWSPGPFFWFVVVVTQVAGIALLLWMAERITEYGIGNGTSLIIFAG 191
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ + + + + + V F+ L + V + R++ +Q Y K+
Sbjct: 192 IVVEWLPQILRTIGLIRTGEVNLVAFLF-FLAFIVLAFAGMAAVQQAERRIPVQ-YARKV 249
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS-ILGSPFWQHVKEILN 317
T YIP +N +G+ P++ +L P LA+ +P Q + N
Sbjct: 250 VGGRVYGGQAT----YIPIKLNAAGVIPIIFAAAILQIPIFLAAPFQDNPVLQGIANFFN 305
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
P G V I +V+ FD PK IA+ L + G IP ++PG+ T+++L
Sbjct: 306 PTRPSGLFIEVLLVILFTYVYTAVQFD----PKRIAESLREYGGFIPGIRPGEPTVKFLE 361
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV--LIIVGSIIELRRSYQA 435
I + WG L L ++ T+L ++ + SI F+ + LI+VG ++ R ++
Sbjct: 362 HIVSRLTLWGALFLGLV----TLLPQIIQNLTGIHSIAFSGIGLLIVVGVALDTLRQVES 417
Query: 436 YNVMPSLSKALRR 448
++ S L R
Sbjct: 418 QLMLRSYEGFLSR 430
>gi|110802915|ref|YP_699643.1| preprotein translocase subunit SecY [Clostridium perfringens SM101]
gi|110683416|gb|ABG86786.1| preprotein translocase, SecY subunit [Clostridium perfringens
SM101]
Length = 425
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 211/439 (48%), Gaps = 37/439 (8%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFV--SGSVD 71
S L NA + ++R+++ T LI I R+G +IP+PG D D L + SGS+
Sbjct: 3 STLRNAWKV---QDLRKKIIWTVFLIAIFRMGSYIPVPGID-----TDSLKALTQSGSLV 54
Query: 72 ELGDF---GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIW 128
D G+ + S F LG+ P I ASI+MQ+L +P L QL KEG DG +KI+
Sbjct: 55 SFYDLISGGSFSRFSIFALGVVPYINASIIMQLLTVAIPKLEQLSKEGDDGRKKIQKITR 114
Query: 129 WISLGFAILEAVIVACYSLPYSIYA-ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
+ S+ + A Y + +++ A S+S + + LV G+ + W+ D I+ G
Sbjct: 115 YASIVIGAITA--YGSYVIIHNVGALKSNSPVSMFLILLTLVVGSTFLMWLGDQITVKGV 172
Query: 188 GQGSSLIICVGILTGYTETLYKM--LSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTE 244
G G+SLII IL+ T Y++ LS++ +V + L FT+ + V+ ++
Sbjct: 173 GNGTSLIIFANILSSLPMTGYQIYNLSKIGKINV----VEIALFIFFTLALLAGVIYLSL 228
Query: 245 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 304
R++ +QY G + + + +IP +I + + ++ +++FP+ +A
Sbjct: 229 AERRITVQYAGKAVGNKMMKGQ-----STHIPLSIIGTTVIAIIFAMSVMSFPTTIAQFF 283
Query: 305 GSPFWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMG 360
W +P A+ W+Y +YA F F I P E+A+ ++K
Sbjct: 284 PEAGWSQWITGSSYSP---FNAKTWMYPVLYALLTIFFTWFYTQITFKPDEMAENMHKSS 340
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 420
IP ++PGK T YL K+ +GG +I+A ++ +Y +G G TS+L
Sbjct: 341 GFIPGIRPGKPTEIYLEKVLNRISMFGGCFAAIIAVVPILVANYTPF--QGIQFGGTSLL 398
Query: 421 IIVGSIIELRRSYQAYNVM 439
I+V +E+ R ++ M
Sbjct: 399 ILVSVSLEIMRQLESQLTM 417
>gi|296395268|ref|YP_003660152.1| preprotein translocase subunit SecY [Segniliparus rotundus DSM
44985]
gi|296182415|gb|ADG99321.1| preprotein translocase, SecY subunit [Segniliparus rotundus DSM
44985]
Length = 437
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 203/421 (48%), Gaps = 44/421 (10%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSG------SVDELGDFGAEL 80
++RR++FV+ ++V+ R+G +P PG + + + + G S+ L GA L
Sbjct: 13 DLRRKIFVSIGIVVLYRLGATLPSPGVNYKNVHECLDQVSKGDSQGVYSLINLFSGGALL 72
Query: 81 KLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAV 140
+LS F +G+ P I ASI++Q+L ++P QLRKEG G K+ Y ++++ A+L++
Sbjct: 73 QLSVFAIGVVPYITASIIVQLLTVVIPRFEQLRKEGQTGQTKMTQYTRYLAIALALLQSS 132
Query: 141 IVACYSLPYSIYAA-------SHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
+ + + + + H + ++V ++ GA + W + ISE G G G SL
Sbjct: 133 AIVALASRHQLLRSCTRDILDGHEIFQLIVIVLVMTAGATLVMWFGEIISERGIGNGMSL 192
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQ 252
+I GI ++L G + L+ V ++ M +V+ + +G R++ +Q
Sbjct: 193 LIFAGIAARIPAEGKQILQTRGG-------LVFALVCVAAVIIMASVIFIEQGQRRIPVQ 245
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL---GSPFW 309
Y + S Y+P +N +G+ PV+ + LL P+++ +L G+ W
Sbjct: 246 YAKRMVGRKMYGGS-----STYLPLKVNQAGVIPVIFASSLLYIPNLIIELLSSRGTSGW 300
Query: 310 QH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVK 367
Q ++NP + V + + ++ F ++ F+ P+E A+ + K G IP ++
Sbjct: 301 QRWIQNNLVNPSSYVHIAVYFFLILFFTFFYVAITFN----PQERAEEMKKYGGFIPGIR 356
Query: 368 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRI-NEG----FSIGFTSVLII 422
PG T EYL + G + L ++A IL + +I N G G T+VLI+
Sbjct: 357 PGAPTAEYLNFVLTRITLPGSIYLGVIA----ILPNLFMQIGNSGGAPNLPFGGTAVLIL 412
Query: 423 V 423
V
Sbjct: 413 V 413
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.141 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,750,114,667
Number of Sequences: 23463169
Number of extensions: 279148071
Number of successful extensions: 983445
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3313
Number of HSP's successfully gapped in prelim test: 675
Number of HSP's that attempted gapping in prelim test: 963710
Number of HSP's gapped (non-prelim): 4266
length of query: 451
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 305
effective length of database: 8,933,572,693
effective search space: 2724739671365
effective search space used: 2724739671365
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 79 (35.0 bits)