BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013035
(451 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4IQV7|SCY2_ARATH Preprotein translocase subunit SCY2, chloroplastic OS=Arabidopsis
thaliana GN=SCY2 PE=2 SV=1
Length = 575
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/450 (83%), Positives = 426/450 (94%)
Query: 2 YKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD 61
++NRFL+F+R+SSVLN AAE FFKSEIRRRLFVTAVL+V+SR+GYFIPLPGFDRRLIPQD
Sbjct: 126 FRNRFLDFVRISSVLNTAAERFFKSEIRRRLFVTAVLLVLSRVGYFIPLPGFDRRLIPQD 185
Query: 62 YLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHE 121
YLSFVSGSV+ELG+FGAE+KLS FQLG+SPQI+ASI+MQVLCH++PSLV+LRKEGLDGHE
Sbjct: 186 YLSFVSGSVEELGEFGAEIKLSLFQLGLSPQIIASIIMQVLCHVLPSLVKLRKEGLDGHE 245
Query: 122 KIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDT 181
KIKSYIWW+S FAI+EA++VA SL YS++AA+ VKHVM+T+ LLVCGAMTM+W+CDT
Sbjct: 246 KIKSYIWWLSFFFAIVEALVVAYTSLQYSVFAATAQVKHVMMTSSLLVCGAMTMTWLCDT 305
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 241
ISESGFG GSSLIICVGILTGYTETL+KML+Q+ GS W P++LGLLG+FT+VTM+AVV
Sbjct: 306 ISESGFGHGSSLIICVGILTGYTETLHKMLNQISGSFSNWLPYLLGLLGIFTVVTMFAVV 365
Query: 242 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 301
VTEGCRK+KLQYYGFKLASA+RE SPITEVEPYIPFNINP+GMQPVLTTTYLLAFPSILA
Sbjct: 366 VTEGCRKIKLQYYGFKLASASREGSPITEVEPYIPFNINPAGMQPVLTTTYLLAFPSILA 425
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGA 361
SILGSPF ++KEILNPE++VGA PWVYY+IYAFFVFLFNIFDIANLPKEIADYLNKMGA
Sbjct: 426 SILGSPFLLNMKEILNPESTVGAPPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGA 485
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
RIPN+KPGKATIEYLTKIQASTRFWGGLLLS LAT+ST+LDHYLR IN+GFSIGFTSVLI
Sbjct: 486 RIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATASTVLDHYLRSINQGFSIGFTSVLI 545
Query: 422 IVGSIIELRRSYQAYNVMPSLSKALRRYGV 451
IVGSIIELRRSY AYNVMPSLSKAL+RYGV
Sbjct: 546 IVGSIIELRRSYHAYNVMPSLSKALKRYGV 575
>sp|P0A4H1|SECY_SYNP6 Protein translocase subunit SecY OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=secY PE=3 SV=1
Length = 439
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 218/435 (50%), Gaps = 33/435 (7%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-----LSFVSG 68
NA E+F + S +R R+ +T L+++ R+G FIP+PG DR D L V G
Sbjct: 10 NAQETFLQMAQASGLRGRILITVGLLILCRLGIFIPVPGIDRVAFSNDLQGNANLGGVIG 69
Query: 69 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 127
+D G L F LGI P I ASI++Q+L VP+L L+K EG G KI
Sbjct: 70 FLDIFSGGGLS-ALGVFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRKIAQLT 128
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
++SLG+A+L+++++A + + YA + + TA LV G+M + WI + I+E G
Sbjct: 129 RYVSLGWALLQSIVIAVW---VTRYAVTPGPLFTIQTALALVAGSMFVMWISELITERGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G G+SL+I + I+ +L + L ++ LL VF + V V EG R
Sbjct: 186 GNGASLLIFLNIVATLPRSLQQTLELAQSGDRSTVGGIVILLIVFLATIVGIVFVQEGTR 245
Query: 248 KVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
++ + SA R+ + +E Y+P +N G+ P++ + +L P LA+
Sbjct: 246 RI-------PVVSARRQVGNRVYSERSSYLPLRLNQGGVMPIIFASAILVLPFSLANFTS 298
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGAR 362
+ + L+P G PW+Y Y + F+ F I N P ++A L KMG+
Sbjct: 299 NEVVLRIANYLSPN---GPTPWIYALFYLVLIVAFSYFYSSLILN-PVDLAQNLKKMGSS 354
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLI 421
IP V+PG+AT +Y+ + G + L ++A T ++ R R +GF G TS+LI
Sbjct: 355 IPGVRPGRATSQYVQGVLNRLTILGAVFLGLVAIIPTAVEGATRIRTFQGF--GATSLLI 412
Query: 422 IVGSIIELRRSYQAY 436
+VG I+ + Q Y
Sbjct: 413 LVGVAIDTAKQVQTY 427
>sp|P0A4H0|SECY_SYNE7 Protein translocase subunit SecY OS=Synechococcus elongatus (strain
PCC 7942) GN=secY PE=3 SV=1
Length = 439
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 218/435 (50%), Gaps = 33/435 (7%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-----LSFVSG 68
NA E+F + S +R R+ +T L+++ R+G FIP+PG DR D L V G
Sbjct: 10 NAQETFLQMAQASGLRGRILITVGLLILCRLGIFIPVPGIDRVAFSNDLQGNANLGGVIG 69
Query: 69 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 127
+D G L F LGI P I ASI++Q+L VP+L L+K EG G KI
Sbjct: 70 FLDIFSGGGLS-ALGVFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRKIAQLT 128
Query: 128 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
++SLG+A+L+++++A + + YA + + TA LV G+M + WI + I+E G
Sbjct: 129 RYVSLGWALLQSIVIAVW---VTRYAVTPGPLFTIQTALALVAGSMFVMWISELITERGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
G G+SL+I + I+ +L + L ++ LL VF + V V EG R
Sbjct: 186 GNGASLLIFLNIVATLPRSLQQTLELAQSGDRSTVGGIVILLIVFLATIVGIVFVQEGTR 245
Query: 248 KVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 305
++ + SA R+ + +E Y+P +N G+ P++ + +L P LA+
Sbjct: 246 RI-------PVVSARRQVGNRVYSERSSYLPLRLNQGGVMPIIFASAILVLPFSLANFTS 298
Query: 306 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYLNKMGAR 362
+ + L+P G PW+Y Y + F+ F I N P ++A L KMG+
Sbjct: 299 NEVVLRIANYLSPN---GPTPWIYALFYLVLIVAFSYFYSSLILN-PVDLAQNLKKMGSS 354
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLI 421
IP V+PG+AT +Y+ + G + L ++A T ++ R R +GF G TS+LI
Sbjct: 355 IPGVRPGRATSQYVQGVLNRLTILGAVFLGLVAIIPTAVEGATRIRTFQGF--GATSLLI 412
Query: 422 IVGSIIELRRSYQAY 436
+VG I+ + Q Y
Sbjct: 413 LVGVAIDTAKQVQTY 427
>sp|O66491|SECY_AQUAE Protein translocase subunit SecY OS=Aquifex aeolicus (strain VF5)
GN=secY PE=1 SV=1
Length = 429
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 226/439 (51%), Gaps = 37/439 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL-KL 82
E+R++ T ++ VI R+G IP+PG + + +D+L GSV L D G L +L
Sbjct: 12 KELRQKFIFTLLMFVIYRLGSHIPIPGINPEAL-RDFLKAFEGSVFALYDIFSGGNLGRL 70
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEAVI 141
+ F LG+ P I ASI+MQ+L +PSL +L KE D G KI Y +++L A ++++
Sbjct: 71 TVFALGVMPYISASIMMQLLTVAIPSLQRLAKEEGDYGRYKINEYTKYLTLFVATVQSLG 130
Query: 142 VACY----SLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
+A + P I + + +++T LV G M + WI D I+E G G G+SLII
Sbjct: 131 IAFWIRGQVSPKGIPVVENPGISFILITVLTLVAGTMFLVWIADRITEKGIGNGASLIIF 190
Query: 197 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYG 255
GI+ + + + ++ + P L L+ I + +V V E R++ +QY G
Sbjct: 191 AGIVANFPNAVIQFYEKVKTGDI--GPLTLLLIIALIIAIIVGIVYVQEAERRIPIQYPG 248
Query: 256 FKLAS---AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 312
++ A R+ Y+P INP+G+ P++ LL PS L + + +PF + +
Sbjct: 249 RQVGRQLYAGRKT--------YLPIKINPAGVIPIIFAQALLLIPSTLLNFVQNPFIKVI 300
Query: 313 KEILNPETSVGARPWVYYT-IYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 369
++ P GA ++Y +Y F+ F F A L P E+A+ L+K GA IP V+PG
Sbjct: 301 ADMFQP----GA---IFYNFLYVTFIVFFTYFYTAVLINPVELAENLHKAGAFIPGVRPG 353
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
+ T++YL +I F+G L LS++A ++ + N F G T+ LI+VG ++
Sbjct: 354 QDTVKYLERIINRLIFFGALFLSVIALIPILISVWF---NIPFYFGGTTALIVVGVALDT 410
Query: 430 RRSYQAYNVMPSLSKALRR 448
R + Y + +RR
Sbjct: 411 FRQIETYLIQKKYKSYVRR 429
>sp|Q1XDJ1|SECY_PORYE Protein translocase subunit SecY OS=Porphyra yezoensis GN=secY PE=3
SV=1
Length = 411
Score = 171 bits (433), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 220/427 (51%), Gaps = 45/427 (10%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDF 76
KS++R R+ T L+V++R+G FIP+PG D + ++L+ SG G F
Sbjct: 4 KSDLRNRIIFTLFLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 58
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFA 135
+ F LGI P I +SI+MQ+L IVP+L +L+KE G G +KI +++LG+A
Sbjct: 59 ST---IGIFALGIVPYINSSIVMQLLTKIVPNLEKLQKEEGELGRQKITQITRYLALGWA 115
Query: 136 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
L++ ++ + PY + + V + L G+M + W+ + I+E G G G+SL+I
Sbjct: 116 TLQSGAISIWVKPY---VFNWNFAFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLI 172
Query: 196 CVGILTG----YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
I++G +T++ + + +S+++ F + +F ++ + + V EG R++K+
Sbjct: 173 FQNIVSGLPKNFTQSFFD--ASYSNASLKFGLF----IAIFLLMIIITICVQEGTRRIKI 226
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
+++ S I + Y+P +N G+ P++ + +A PS L I+ +
Sbjct: 227 ------ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPSYLTQIIQNKTLLQ 280
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPG 369
+ + P S+ Y +Y + F+ F I P++IA L KMGA IPN++PG
Sbjct: 281 ILYLFCPNGSL------YLLLYCALILFFSYFYTSIVMNPEDIAINLKKMGASIPNIRPG 334
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
+ATI+YL I F G L +A I++ + +I +G TS+LI+VG I+
Sbjct: 335 QATIDYLQVILNRLTFLGASFLFTVALIPFIIEK-VTQIQNLRGLGATSLLILVGVAIDT 393
Query: 430 RRSYQAY 436
+ Q Y
Sbjct: 394 AKQIQTY 400
>sp|P51297|SECY_PORPU Protein translocase subunit SecY OS=Porphyra purpurea GN=secY PE=3
SV=1
Length = 411
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 221/422 (52%), Gaps = 35/422 (8%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGS-VDELGDF--GAELK 81
KS++R R+ T +L+V++R+G FIP+PG D Y S + V+ L F G
Sbjct: 4 KSDLRNRIKFTLLLLVLARLGIFIPVPGIDHDAF---YASVEKNTLVNFLNIFSGGGFST 60
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFAILEAV 140
+ F LGI P I +SI+MQ+L I+P L +L+KE G G +KI +++LG+A L++
Sbjct: 61 IGIFALGIVPYINSSIVMQLLTKIIPDLEKLQKEEGELGRQKITQITRYLALGWATLQSG 120
Query: 141 IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
++ + PY + + V + L G+M + W+ + I+E G G G+SL+I I+
Sbjct: 121 AISIWVKPY---VFNWNFTFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLIFQNIV 177
Query: 201 TG----YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGF 256
+G +T++ + + +S+++ F++ +F ++ + + V EG R++K+
Sbjct: 178 SGLPKNFTQSFFD--ANYSNTSIKFGLFIV----IFLLMIIITIFVQEGTRRIKI----- 226
Query: 257 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
+++ S I + Y+P +N G+ P++ + +A P+ L + + F V +
Sbjct: 227 -ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPAYLTQLTQNTFLLQVLYLF 285
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIE 374
P S+ Y +Y+ + F+ F I P++IA L KMGA IPN++PG+ATI+
Sbjct: 286 CPNGSL------YLVLYSVLILFFSYFYTSIVMNPEDIATNLKKMGASIPNIRPGQATID 339
Query: 375 YLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQ 434
YL I F G L +A I++ + +I +G TS+LI+VG I+ + Q
Sbjct: 340 YLQVILNRLTFLGATFLFTVALIPFIIEK-VAQIQNLRGLGATSLLILVGVAIDTAKQIQ 398
Query: 435 AY 436
Y
Sbjct: 399 TY 400
>sp|Q05217|SECY_STACT Protein translocase subunit SecY OS=Staphylococcus carnosus (strain
TM300) GN=secY PE=3 SV=2
Length = 430
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 210/424 (49%), Gaps = 23/424 (5%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 78
+FFK+ E+R ++F T ++VI +IG +IP PG + + S G D L FG A
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNNQGS--QGVTDLLNTFGGGA 64
Query: 79 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGDVGRKKLNNVTRYFAIILAFI 124
Query: 138 EAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
+++ +A Y A S ++ A +L G + W+ + I++ G G G S+II
Sbjct: 125 QSIGMAFQFNNYLKGALIIDPSPMSYLLIAIVLTTGTAFLLWLGEQITQYGVGNGISIII 184
Query: 196 CVGILTGYTETLYKMLSQ-LLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 252
GIL+ +L + Q +G S W + GL+ ++TM AV V + RK+ +Q
Sbjct: 185 FAGILSTLPSSLIQFYQQAFVGQSDTTMAWLQVAGLVIGLVLLTMGAVYVLQAVRKIPIQ 244
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QH 311
Y K S R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 245 YA--KKQSTQRLGSNAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPKADWAQQ 298
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKA 371
+ NP +++G +Y + F + + + P++++D L K G+ +P ++PG+
Sbjct: 299 IANTANPSSNIGMV--IYIILIIAFTYFYAFVQVN--PEKMSDNLKKQGSYVPGIRPGEQ 354
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +Y+TK+ F G + L+++A + ++ + + +G TS+LI++G IE +
Sbjct: 355 TKKYITKVLYRLTFVGSIFLAVIAILPILATKFM-NLPQSIQVGGTSLLIVIGVAIETMK 413
Query: 432 SYQA 435
S +A
Sbjct: 414 SLEA 417
>sp|Q8CNF3|SECY_STAES Protein translocase subunit SecY OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=secY PE=3 SV=1
Length = 430
Score = 158 bits (400), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 209/423 (49%), Gaps = 24/423 (5%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--AEL 80
F E+R ++F T ++VI +IG +IP PG + S G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS--QGATELLNTFGGGALK 66
Query: 81 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +++
Sbjct: 67 RFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFIQS 126
Query: 140 VIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 127 IGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFA 186
Query: 198 GILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +QY
Sbjct: 187 GILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPIQY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QHV 312
K SA R S T Y+P +N +G+ PV+ P L W Q++
Sbjct: 246 A--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNI 299
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ NP +++G +Y + F + + + P+++AD L K G+ +P ++PG+ T
Sbjct: 300 ADTANPSSNIGM--IIYVVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGEQT 355
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+Y+TK+ F G + L+ +A I ++ + + IG TS+LI++G IE ++
Sbjct: 356 KKYITKVLYRLTFVGSIFLAAIAILPIIATKFM-GLPQSIQIGGTSLLIVIGVAIETMKT 414
Query: 433 YQA 435
+A
Sbjct: 415 LEA 417
>sp|Q5HM19|SECY_STAEQ Protein translocase subunit SecY OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=secY PE=3 SV=1
Length = 430
Score = 158 bits (400), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 209/423 (49%), Gaps = 24/423 (5%)
Query: 23 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--AEL 80
F E+R ++F T ++VI +IG +IP PG + S G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS--QGATELLNTFGGGALK 66
Query: 81 KLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +++
Sbjct: 67 RFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFIQS 126
Query: 140 VIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICV 197
+ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 127 IGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFA 186
Query: 198 GILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 253
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +QY
Sbjct: 187 GILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPIQY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QHV 312
K SA R S T Y+P +N +G+ PV+ P L W Q++
Sbjct: 246 A--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNI 299
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ NP +++G +Y + F + + + P+++AD L K G+ +P ++PG+ T
Sbjct: 300 ADTANPSSNIGM--IIYVVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGEQT 355
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+Y+TK+ F G + L+ +A I ++ + + IG TS+LI++G IE ++
Sbjct: 356 KKYITKVLYRLTFVGSIFLAAIAILPIIATKFM-GLPQSIQIGGTSLLIVIGVAIETMKT 414
Query: 433 YQA 435
+A
Sbjct: 415 LEA 417
>sp|Q7A086|SECY_STAAW Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MW2) GN=secY PE=3 SV=1
Length = 430
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>sp|Q6G791|SECY_STAAS Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MSSA476) GN=secY PE=3 SV=1
Length = 430
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>sp|Q6GEK3|SECY_STAAR Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MRSA252) GN=secY PE=3 SV=1
Length = 430
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>sp|Q7A468|SECY_STAAN Protein translocase subunit SecY OS=Staphylococcus aureus (strain
N315) GN=secY PE=1 SV=1
Length = 430
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>sp|Q99S39|SECY_STAAM Protein translocase subunit SecY OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=secY PE=3 SV=1
Length = 430
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>sp|Q5HDX8|SECY_STAAC Protein translocase subunit SecY OS=Staphylococcus aureus (strain
COL) GN=secY PE=3 SV=1
Length = 430
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>sp|O08387|SECY_STAA8 Protein translocase subunit SecY OS=Staphylococcus aureus (strain
NCTC 8325) GN=secY PE=3 SV=2
Length = 430
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 22 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 75
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 76 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 133 GFAILEAVIVACYSLPYSIYA--ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ +A Y A + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 191 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 307 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGM--VVYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 426 IIELRRSYQA 435
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>sp|P28527|SECY_GUITH Protein translocase subunit SecY OS=Guillardia theta GN=secY PE=3
SV=2
Length = 420
Score = 155 bits (391), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 218/430 (50%), Gaps = 30/430 (6%)
Query: 16 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 75
+N + +S K +++ R+ T LIV+SR+G F+P+PG D Q +S + V+ L
Sbjct: 1 MNTSIKSIKKQDLKDRIVFTLFLIVMSRLGTFLPIPGVDHDAFYQSIIS--NPLVNFLNV 58
Query: 76 F--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISL 132
F G + F LGI P I ASI++Q+ + +PSL +L+KE G G +KI +++L
Sbjct: 59 FSGGGFASIGVFALGIVPYINASIIVQLATNSIPSLEKLQKEEGELGRQKIVQLTRYVAL 118
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
+A+++++ V+ + PY + + V + L G+M + W + I+E G G G S
Sbjct: 119 VWALIQSIGVSFWVRPY---VFNWDLNFVFAMSLTLTIGSMLIMWFSEQITEKGIGNGPS 175
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV------TEGC 246
L+I + I++G L +LL S ++ + L +F +V +++V++ EG
Sbjct: 176 LLIFINIISG--------LPKLLQSQIQSTRLNIQALDIFVLVFIFSVMIIGIIFIQEGI 227
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
+++ + +++ + Y+P +N SG+ P++ + +L P+ LA ++ +
Sbjct: 228 KRIPI------ISARQLGKGQMDNKTSYLPLKLNQSGVMPIIFASAVLVLPAYLAQLVSN 281
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNV 366
+ V + + ++ ++Y F F I N P +++ L KM + I V
Sbjct: 282 EQLRTVLHLFDGTSNNKLLYLLFYFTLILFFSYFYTSLILN-PNDVSKNLKKMESSIYGV 340
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PGKAT EYL K F G L L+ +A I++ L ++ +G TS+LIIVG
Sbjct: 341 RPGKATTEYLQKTLNRLTFLGALFLAFIAIVPNIIET-LTNLSVFKGLGGTSLLIIVGVQ 399
Query: 427 IELRRSYQAY 436
++ + Q Y
Sbjct: 400 VDTSKQIQTY 409
>sp|P38397|SECY_PYRSA Protein translocase subunit SecY (Fragment) OS=Pyrenomonas salina
GN=secY PE=3 SV=1
Length = 412
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 213/424 (50%), Gaps = 44/424 (10%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD--------YLSFVSGSVDELGDF 76
K I+ R+F+T L+V+SR+G FIP+PG D Q +L+ SG G F
Sbjct: 10 KEGIKERIFLTIGLLVLSRLGTFIPVPGVDHDAFYQSISTNPIVTFLNIFSG-----GGF 64
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 135
+ + F LGI P I ASI++Q+ +P+L +L+K EG G +KI + +LG+A
Sbjct: 65 AS---IGIFALGIVPYINASIVIQLATTSIPNLEKLQKEEGEAGRQKISQITRYRALGWA 121
Query: 136 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
++++ V+ + PY S V + + L G+M + W + I+E G G G SL+I
Sbjct: 122 AIQSLGVSFWVRPYVFNWDSQFVVQMTLA---LTTGSMLIMWFSEQITEKGIGNGPSLLI 178
Query: 196 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 255
+ I+ G + L + S + S+ + +V + ++ V + ++ + Y
Sbjct: 179 FINIIAGLPK-LIQQKSNAISSTNQ----------TTELVVLASISVYDSRIFIRDRRY- 226
Query: 256 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 315
+ L + R + Y+P +N G+ P++ + +L P+ L ++ + F + +
Sbjct: 227 YILQTVGRH----CKQTSYLPLRLNQGGVMPIIFASAILVLPAYLGQVIQNQFVLKLVTL 282
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL---PKEIADYLNKMGARIPNVKPGKAT 372
L+P +S Y I+ F + LF + A+L P +++ L KM + IP V+PGKAT
Sbjct: 283 LSPNSSDKN----LYLIFYFSLILFFSYFYASLIINPNDVSQNLKKMESSIPGVRPGKAT 338
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 432
+YL K F G L L+ +A +I+++ + I+ +G TS+LI+VG I+ R
Sbjct: 339 TDYLQKTLNRLTFLGALFLAFIAVVPSIIEN-ITSISTFKGLGATSLLILVGVAIDTSRQ 397
Query: 433 YQAY 436
Q Y
Sbjct: 398 IQTY 401
>sp|P28539|SECY_CHLTR Protein translocase subunit SecY OS=Chlamydia trachomatis (strain
D/UW-3/Cx) GN=secY PE=3 SV=3
Length = 457
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 226/457 (49%), Gaps = 41/457 (8%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 76
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRLFTLVL 125
Query: 135 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A ++L P + A S+K + T +++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMITGTLLLMWVGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF----MLGLLGVFTIVTM 237
IS+ G G G SLII +GIL + L + ++L S F +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGILASFPSVLGSIFNKLNLGSQDPSEFGIVSLLILCAVFVFVLM 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP 297
V++ EG RK+ +Q+ + RE + Y+P +N +G+ PV+ + LL FP
Sbjct: 246 ATVLIIEGMRKIPVQHA--RRIIGRRE---VVGGGSYLPLKVNYAGVIPVIFASSLLMFP 300
Query: 298 SILASILGSP--FWQHVKEILNPETSVGARPWVYYTI-YAFFVFLFNIFDIANL--PKEI 352
+ + L S + + + +L+P + V Y+I Y + F F A P++I
Sbjct: 301 ATIGQFLSSESSWLKRIATMLSPGS-------VAYSIFYVLLIIFFTYFWTATQFRPEQI 353
Query: 353 ADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEG 411
A + K GA IP ++ GK T YL G + L+++A +IL LR N
Sbjct: 354 ASEMKKNGAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVVAILPSILGRILRVDANVS 413
Query: 412 FSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRR 448
+ +G T++LI+VG I++ + A+ ++ L++
Sbjct: 414 YFLGGTAMLIVVGVILDTMKQIDAFLLVRRYDGVLKK 450
>sp|P43804|SECY_HAEIN Protein translocase subunit SecY OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=secY PE=3 SV=1
Length = 441
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 207/435 (47%), Gaps = 28/435 (6%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 82
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 143 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 259
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 260 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 315
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 373
LNP +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTS 361
Query: 374 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 433
Y+ K+ GGL ++ + I+ + F G TS+LI+V I++
Sbjct: 362 RYIDKVMTRLTLIGGLYVTFVCLVPYIMTSAW---DVKFYFGGTSLLIVVVVIMDFIVQV 418
Query: 434 QAYNVMPSLSKALRR 448
Q++ + AL++
Sbjct: 419 QSHLMSSQYESALKK 433
>sp|O63066|SECY_MAIZE Preprotein translocase subunit SECY, chloroplastic OS=Zea mays
GN=SECY PE=2 SV=1
Length = 553
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 203/420 (48%), Gaps = 26/420 (6%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAE 79
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 134 DFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLL-GTLDSFSGGGIG 192
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILE 138
+L LGI P I A I+ Q+L + P L L RKEG G +K+ Y + S+GFAI++
Sbjct: 193 -RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAIVQ 251
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL+I
Sbjct: 252 AIGQVLYLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTS 308
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I++ + + ++Q + +L ++ F ++ + V V E RK+ L Y
Sbjct: 309 IISYLPASFGRTVAQAFQDG--NYVGLLTIILSFLLLVLGIVYVQEAERKIPLNY----- 361
Query: 259 ASAAREDSPITEVE--PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 316
A+R S E++ Y+PF +N SG+ P++ +T LA P LA G F + L
Sbjct: 362 --ASRYSSRTGELQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKKAAIAL 419
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
NP ++ V + AFF + + + P ++++ L + GA IP V+PGK+T Y+
Sbjct: 420 NPGGALYLPTNVL--LIAFFNYYYTFLQLD--PDDLSEQLKRQGASIPLVRPGKSTAAYI 475
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELRRSYQA 435
+ G L++LA ++++ GF+ TSVLI+VG + R QA
Sbjct: 476 KTVLNRISVLGSAFLAVLAAGPSLVEQTSHLTAFRGFA--GTSVLILVGCATDTARKVQA 533
>sp|Q59912|SECY_STRGB Protein translocase subunit SecY OS=Streptomyces galbus GN=secY
PE=3 SV=1
Length = 437
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 212/439 (48%), Gaps = 32/439 (7%)
Query: 15 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 74
+L A +F ++R++L T +IV+ R+G IP+PG D + + Q + SG+ G
Sbjct: 1 MLTAFARAFRTPDLRKKLLFTLAIIVVYRVGTHIPIPGVDYKNV-QQCVREASGNQGLFG 59
Query: 75 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 129
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 130 ISLGFAILE--AVIVACYSLPY----SIYAASHSVKHVMVTAFLLVC---GAMTMSWICD 180
+++ AIL+ ++ S P S+ + + T +++C G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSAPLFGRCSVGGQIVPDQSIFTTITMVICMTAGTCVVMWLGE 179
Query: 181 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 240
I++ G G G S+++ + I + L+ + Q G+ W ++ V I+ V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKKQ--GTLAGGWIEFGTVIAVGLIMVALVV 237
Query: 241 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 300
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALV 292
Query: 301 ASIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIA---NLPKEIADYL 356
A G+ W K + + G P +Y Y + F F +A N P+E+AD +
Sbjct: 293 AQFAGGNSGW---KSWVEQNLTKGDHP-IYIVTYFLLIVFFAFFYVAISFN-PEEVADNM 347
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K G IP ++ G+ T EYL+ + + G L L ++A T+ ++ F G
Sbjct: 348 KKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALVGFGA-SQNFPFGG 406
Query: 417 TSVLIIVGSIIELRRSYQA 435
TS+LIIVG +E + ++
Sbjct: 407 TSILIIVGVGLETVKQIES 425
>sp|P77964|SECY_SYNY3 Protein translocase subunit SecY OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=secY PE=3 SV=1
Length = 442
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 216/440 (49%), Gaps = 41/440 (9%)
Query: 18 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 65
+A E+F + + +R RL +T L+++ R+G FIP+P DR+ Q +L+
Sbjct: 10 SAQETFLQMAQAAGLRGRLLITIGLLILVRVGIFIPVPDIDRQAFSQAINDNSVIGFLNI 69
Query: 66 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 124
+G G + F LGI P I ASI+MQ+L +P+L L+K EG G KI
Sbjct: 70 FTG--------GGLSTVGIFALGILPYINASIIMQLLTAAIPALEDLQKNEGEAGRRKIS 121
Query: 125 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 184
Y +I+ G+ I++ + + L YA ++ + T + G+M + WI + I+E
Sbjct: 122 QYSRYIAFGWCIIQGLGLTVGLL--RPYANNYGPLFIFQTVLAITAGSMFVMWISELITE 179
Query: 185 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 244
G G G+SL+I V I+ +TL + + + ++ L+ VF ++ + V V E
Sbjct: 180 RGIGNGASLLIFVNIVATLPQTLGQTIEYAQSGGRQSITAVVLLMLVFLVMIVGIVFVQE 239
Query: 245 GCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 302
G R++ + SA R+ E Y+P +N G+ P++ + +L PS LA
Sbjct: 240 GTRRIPI-------ISARRQVGKKLYRERTSYLPLRLNQGGVMPIIFASAVLILPSSLAG 292
Query: 303 I-LGSPFWQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIFD---IANLPKEIADYL 356
G+ EI + S RP WVY +Y+ +F F+ F I N P++++ L
Sbjct: 293 FATGNEGLGGFGEIF-VQISNALRPGTWVYTVVYSVMIFFFSYFYASLIVN-PEDVSKNL 350
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
KMG+ IP ++PGK T +YL + F G + LS +AT ++ + +G
Sbjct: 351 KKMGSSIPGIRPGKKTEQYLEGVLNRLTFLGAIFLSFVATLPIFVEQ-ATGVTTFQGLGA 409
Query: 417 TSVLIIVGSIIELRRSYQAY 436
TS+LI+VG I+ + Q Y
Sbjct: 410 TSLLILVGVAIDTAKQIQTY 429
>sp|Q9PJN1|SECY_CHLMU Protein translocase subunit SecY OS=Chlamydia muridarum (strain
MoPn / Nigg) GN=secY PE=3 SV=1
Length = 457
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 218/447 (48%), Gaps = 45/447 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 76
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMREAPDQGKRKLGRMTRLFTLLL 125
Query: 135 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 181
A +++++ A ++L P + A S+K + T ++ G + + WI +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGIPCVFYLTTVVVMTTGTLLLMWIGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPF----MLGLLGVFTIVTM 237
IS+ G G G SLII +G+L + L + ++L S F +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGMLASFPSVLGSIFNKLNLGSQDPSEFGIVSLLVLCAVFVFVLM 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVLTTTYLL 294
V++ EG RKV +Q+ AR EV Y+P +N +G+ PV+ + LL
Sbjct: 246 ATVLIIEGVRKVPVQH--------ARRIIGRREVLGGGSYLPLKVNYAGVIPVIFASSLL 297
Query: 295 AFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PK 350
FP+ + L S + + + +L+P + VY Y + F F A P+
Sbjct: 298 MFPATIGQFLSSESSWLKRIATMLSPGSV------VYSIFYVLLIIFFTYFWTATQFRPE 351
Query: 351 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RIN 409
+IA + K GA IP ++ GK T YL G + L+++A +IL LR N
Sbjct: 352 QIASEMKKNGAFIPGIRQGKPTQSYLEYTMNRVTLLGAVFLAVVAILPSILGRILRVDAN 411
Query: 410 EGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ +G T++LI+VG +++ + A+
Sbjct: 412 VSYFLGGTAMLIVVGVVLDTMKQIDAF 438
>sp|P46249|SECY_CYACA Protein translocase subunit SecY OS=Cyanidium caldarium GN=secY
PE=2 SV=2
Length = 410
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 208/417 (49%), Gaps = 26/417 (6%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSF 84
++ +R RLF T I + R+G F+P+PG D++L DY + ++ + D KLS
Sbjct: 4 ENNLRLRLFQTMKFIALERLGLFVPIPGIDQKLFSSDYSNNAISNLLNVFDNNQAPKLSV 63
Query: 85 FQLGISPQIVASILMQVLCHIVPSLVQLR-KEGLDGHEKIKSYIWWISLGFAILEAVIVA 143
F LGI P I A+I +Q+L P+L +L+ +EG G +K+ ++S FA +E++ +
Sbjct: 64 FALGIIPYINATITIQILSSAFPALKKLQSEEGEIGKKKLNKITKYLSFCFAFIESLAIV 123
Query: 144 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 203
L YA ++ ++ T +L+ GAM + W+ D IS G G G+S+II V I + +
Sbjct: 124 ---LRLQKYAFDWNLYFIVQTTLILISGAMLVMWLADNISYKGIGTGASVIIFVNIASAF 180
Query: 204 TETLYKMLSQLLGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 262
+ L L+QL S+++ F L VF+I + V V E RKV + +++
Sbjct: 181 AKFL---LNQLFVHSIKFLDFASYFALIVFSIACI--VFVQEAIRKVPI------ISAKQ 229
Query: 263 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSV 322
+ + + ++P IN G+ P++ + LLA + G Q V I +
Sbjct: 230 LDSTSFYSNDYFLPLRINQGGVMPIILASSLLALVDYVIR-YGLSTLQAVYFI----NDI 284
Query: 323 GARPWVYYTIYAFFVFLFNIFDIANLPK--EIADYLNKMGARIPNVKPGKATIEYLTKIQ 380
++ +Y+ F+ FN + + E+++ L K IP+++PGK T ++
Sbjct: 285 LPFKILFLLLYSAFIIFFNYLYCSLVLNCFELSNNLKKASVVIPSIRPGKMTEKFFKDTL 344
Query: 381 ASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQAY 436
+ +G L+ + + L+ R+ +G ++ +S+LI+VG I+L + + Y
Sbjct: 345 DNLTLFGSGFLAFIVLAPNFLEFVFHIRVFKGLAV--SSLLIVVGVAIDLIKQSKTY 399
>sp|Q6ZG25|SECY_ORYSJ Preprotein translocase subunit SECY, chloroplastic OS=Oryza sativa
subsp. japonica GN=SECY PE=2 SV=1
Length = 556
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 201/420 (47%), Gaps = 26/420 (6%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAE 79
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 137 DFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFAGNLDQNSLL-GTLDSFSGGGIG 195
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILE 138
+L LGI P I A I+ Q+L + P L L +KEG G +K+ Y + S+GFAI++
Sbjct: 196 -RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKVLQYTRYASVGFAIVQ 254
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A+ + PY S + V+ + LL G++ ++I + IS+ G G+SL+I
Sbjct: 255 AIGQVLFLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTS 311
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I++ + + ++Q + +L ++ F + + V V E RK+ L Y
Sbjct: 312 IISYLPASFGRTVAQAFQDG--NYVGLLTIILSFLFLVLGIVYVQEAERKIPLNY----- 364
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNP 318
AS S + Y+PF +N SG+ P++ +T LA P LA G F + LNP
Sbjct: 365 ASRYSSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLEFLKKAAISLNP 424
Query: 319 ETSVGARPWVYYTIY--AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
G ++ + AFF + + + P ++++ L + GA IP V+PGK+T ++
Sbjct: 425 ----GGALYIPTNVLLIAFFNYYYTFLQLD--PDDLSEQLKRQGASIPLVRPGKSTAAFI 478
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELRRSYQA 435
+ ++ G L++LA ++++ GF+ TSVLI+VG + R QA
Sbjct: 479 KTVLSNISVLGSAFLAVLAAGPSVVEQITHLTAFRGFA--GTSVLILVGCATDTARKVQA 536
>sp|F6CD01|SECY1_LACKZ Protein translocase subunit SecY 1 OS=Lactobacillus kefiranofaciens
(strain ZW3) GN=secY PE=3 SV=1
Length = 431
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 213/430 (49%), Gaps = 27/430 (6%)
Query: 14 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 73
S L NA F EIR +++ T ++++ RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIYFTLFILLLYRIGANITVPGINVKAITQVAQTGLVPMLDTV 59
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLTL 118
Query: 133 GFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFVQSIGITLGFNALTQMGLVKNQTPQTYVEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 191 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 245
S+II GI+ LY++ + + +S RW F + ++ IVT V +
Sbjct: 179 VSVIIFAGIIARLPSGLYQIYKEEIINNSASDRWQGILFFIAVIVAILIVTQLVTWVEQA 238
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASIL 304
R++ +QY + I+ E ++P +N SG+ PV+ + + P +IL +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIVTPATILMAFQ 289
Query: 305 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGAR 362
+ Q +++N S+ P V IY + LF F + P+++A+ L K GA
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGV--IIYTLLIILFTFFYAFVQVNPEKLAENLQKQGAY 347
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP+V PGK T +Y++K+ G + L ++A + ++ + +G TS+LI+
Sbjct: 348 IPSVWPGKDTQDYVSKMLIKLSTVGSIFLGLVALLPQLATNFW-NLPSSIGLGGTSLLIV 406
Query: 423 VGSIIELRRS 432
+G ++EL R
Sbjct: 407 IGVVLELSRQ 416
>sp|Q9XQU4|SECY_PEA Preprotein translocase subunit SECY, chloroplastic OS=Pisum sativum
GN=SECY PE=2 SV=1
Length = 527
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 199/427 (46%), Gaps = 40/427 (9%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL----IPQDYL-----SFVSGSVDE 72
FF + + + +SR+G +IPL G +R + Q+ L SF G +
Sbjct: 110 DFFNGPLPGKFLKLLGFLALSRLGVYIPLGGVNRDAFLGNLDQNSLLTTLDSFSGGGIGR 169
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWIS 131
LG LGI P I A I+ Q+L + P L L +KEG G +K+ Y + S
Sbjct: 170 LG---------ICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKLLQYTRYAS 220
Query: 132 LGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGS 191
+GFAI++A+ + PY A + + + + LL G++ ++I + I+E G G+
Sbjct: 221 VGFAIVQAIGQVLFLRPY---ANDFTTEWALTSVILLTLGSVFTTYIGEQITELKLGNGT 277
Query: 192 SLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 251
SL+I I++ + + SQ + + ++ ++ F ++ + V V E RK+ +
Sbjct: 278 SLLIFTNIISYLPASFGRTFSQAFSDA--NYVGLVTIIVSFFLLVLGIVYVQEAERKIPI 335
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
Y AS S E Y+PF +N SG+ P++ +T LA P LA G +
Sbjct: 336 NY-----ASRFTSKSGGIEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSSLKT 390
Query: 312 VKEILNPETSVGARPWVYYTIY--AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPG 369
LNP G ++ + I AFF + + + P ++++ L + GA IP V+PG
Sbjct: 391 AAVALNP----GGSFYLPFNILLIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPG 444
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIE 428
K+T ++ + + G L+ILA +++ GF+ TS+LI+VG +
Sbjct: 445 KSTATFIKTVLSRISVLGSTFLAILAAGPAVVEQTAHLTAFRGFA--GTSILILVGCATD 502
Query: 429 LRRSYQA 435
R +A
Sbjct: 503 TARKVRA 509
>sp|P38376|SECY_CORGL Protein translocase subunit SecY OS=Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 /
NCIMB 10025) GN=secY PE=3 SV=1
Length = 440
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 204/430 (47%), Gaps = 46/430 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR-------RLIPQDYLSFVSGSVDEL 73
++F +++R+++F T +IV+ RIG IP PG D R + QD S S + L
Sbjct: 6 QAFKDADLRKKIFFTIAMIVLYRIGAQIPSPGVDYATISGRLRDLTQDQSSVYS--LINL 63
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 133
GA L+LS F +GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++
Sbjct: 64 FSGGALLQLSIFAIGIMPYITASIIVQLLTVVIPHFEELKKEGQSGQAKMMQYTRYLTVA 123
Query: 134 FAILEAV-IVACYSLPY------SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 186
A+L++ IVA + +A + ++V + GA+ + W+ + I+E G
Sbjct: 124 LALLQSSGIVALADREQLLGAGIRVLSADRNFFDLIVLVITMTAGAVLVMWMGELITEKG 183
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G SL+I GI T +L G F + L V I+ + V V +G
Sbjct: 184 VGNGMSLLIFAGIATRLPTDGMNILGNSGGVV-----FAVVLASVL-ILVIGVVFVEQGQ 237
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 238 RRIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNS 292
Query: 307 -------PFWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADY 355
+WQ + + P + W Y +Y F+ F + P E A+
Sbjct: 293 GSLEVSDNWWQRNIIAHLQTPSS------WQYIVLYFALTIFFSYFYVSVQYDPAEQAEN 346
Query: 356 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI-LDHYLRRINEGFS- 413
+ K G IP ++PG+ T EYL + F G L L+++A I LD + + G +
Sbjct: 347 MKKYGGFIPGIRPGRPTAEYLGFVMNRLLFVGSLYLAVIAVLPNIMLDLGVDAGSAGATP 406
Query: 414 IGFTSVLIIV 423
G T++LI+V
Sbjct: 407 FGGTAILILV 416
>sp|Q9X1I9|SECY_THEMA Protein translocase subunit SecY OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=secY PE=1
SV=1
Length = 431
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 213/437 (48%), Gaps = 46/437 (10%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDE 72
+F E+R R+ T + +++ R+G +IP+PG + RR+ ++ + D
Sbjct: 7 NAFKIPELRDRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDV 66
Query: 73 LGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
GA + S F + ++P I ASI++Q+L ++PSL ++ +EG +G +K Y ++L
Sbjct: 67 FTG-GALSRFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAKYTRRLTL 125
Query: 133 GFAILEAVIVA---CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQ 189
+A V+ S P + + ++ +++ ++ G M + W+ + I+E G G
Sbjct: 126 LIGGFQAFFVSFSLARSNPDMVAPGVNVLQFTVLSTMSMLAGTMFLLWLGERITEKGIGN 185
Query: 190 GSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRK 248
G S++I GI+ Y Y + L G ++ W F++ + ++T++ ++ V + R+
Sbjct: 186 GISILIFAGIVARYPS--YIRQAYLGGLNLLEWIFLIAV----ALITIFGIILVQQAERR 239
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
+ +QY A Y+P +N G+ P++ + +++ PS +ASI +
Sbjct: 240 ITIQY-----ARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNN-- 292
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFN------IFDIANLPKEIADYLNKMGAR 362
+ +K + A ++Y IY VF F IFD P+EI++ + K G
Sbjct: 293 -ETLKNLFR------AGGFLYLLIYGLLVFFFTYFYSVVIFD----PREISENIRKYGGY 341
Query: 363 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 422
IP ++PG++T +YL ++ F G + L ++A ++ I IG TS LI
Sbjct: 342 IPGLRPGRSTEQYLHRVLNRVTFIGAVFLVVIALLPYLVQG---AIKVNVWIGGTSALIA 398
Query: 423 VGSIIELRRSYQAYNVM 439
VG +++ + + + VM
Sbjct: 399 VGVALDIIQQMETHMVM 415
>sp|Q59916|SECY_STRGR Protein translocase subunit SecY OS=Streptomyces griseus GN=secY
PE=3 SV=1
Length = 437
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 201/436 (46%), Gaps = 36/436 (8%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 76
A +F ++R++L T +IVI R+G IP PG D + Q SG + L
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVIYRLGAHIPAPGVDYSKVQQCIDQADSGGLLGLMQMFSG 65
Query: 77 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 136
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ AI
Sbjct: 66 GALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALAI 125
Query: 137 LEAVIVACYSLPYSIY---------AASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 187
L+ + + +++ A S+ ++ + G + W+ + I++ G
Sbjct: 126 LQGTGLVATARSGALFQNCSVGSQIVADKSIFTTIIMVLTMTAGTPPVMWLGELITDRGI 185
Query: 188 GQGSSLIICVGILTGYTETLYKML-SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G S+ + + I + L+ + S L W F +L F +V + V V +
Sbjct: 186 GNGMSIPMFISIAATFPGALWAIKESGKLADG--WIEFGTVILIGFVMVAL-VVFVEQAQ 242
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA----S 302
R++ +Q + + + YIP +N +G+ PV+ + LL P+++ S
Sbjct: 243 RRIPVQLPKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIVQFSNS 297
Query: 303 ILGSPFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKM 359
G W + G P+ Y+ + FF F + I+ P E+AD + K
Sbjct: 298 QAGWATW------IQDNFVTGDHPYYIATYFVLIVFFAFFY--VAISFNPDEVADNMKKY 349
Query: 360 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 419
G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G TS+
Sbjct: 350 GGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGGANQNFPFGGTSI 409
Query: 420 LIIVGSIIELRRSYQA 435
LIIVG +E + ++
Sbjct: 410 LIIVGVGLETVKQIES 425
>sp|A3CK84|SECY_STRSV Protein translocase subunit SecY OS=Streptococcus sanguinis (strain
SK36) GN=secY PE=3 SV=1
Length = 435
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 217/440 (49%), Gaps = 50/440 (11%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 73
++F ++R ++ T +I++ RIG I +PG + + + + LS VSG+
Sbjct: 8 DAFKIKQVRSKILFTIFIILVFRIGTTITVPGINAKALSNLNDLPFLNMLSLVSGN---- 63
Query: 74 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 132
A S F LG+SP I ASI++Q+L ++P V+ K+G G K+ +I+L
Sbjct: 64 ----AMRNFSVFALGVSPYITASIVVQLLQMDLLPKFVEWGKQGEVGRRKLNQATRYIAL 119
Query: 133 GFAILEAV-IVACY-SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
A ++A+ I A + +L + A+ +V+ + LL G+M ++W+ + I++ G+G G
Sbjct: 120 VLAFVQAIGITAGFDTLSRANLVANPNVQTYALICVLLATGSMIVTWLGEQITDKGYGNG 179
Query: 191 SSLIICVGILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 242
S+II GI++ Y + + S+ L SS + F+ L+ ++ + V
Sbjct: 180 VSMIIFAGIVSAIPDMIKGIYEDYFVNIPSERLTSS---FIFVGILIVAVLLIIYFTTFV 236
Query: 243 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL-- 300
+ K+ +QY K+A A S Y+P +NP+G+ PV+ + + A P+ +
Sbjct: 237 QQAEYKIPIQYT--KVAKGAPSSS-------YLPLKVNPAGVIPVIFASSITAAPAAIFQ 287
Query: 301 -ASILG-SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYL 356
S LG W + L T++ +YAF + LF F + P++ A+ L
Sbjct: 288 VVSALGYDADWVKTAQSLLATTTISGM-----FMYAFLIVLFTFFYTFVQINPEKTAENL 342
Query: 357 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 416
K GA IP V+PGK T +Y++K+ G L L ++ IL + + + ++G
Sbjct: 343 QKSGAYIPGVRPGKGTEDYMSKLLRRLATVGSLFLGFISILP-ILAKDVFGLTDAVALGG 401
Query: 417 TSVLIIVGSIIELRRSYQAY 436
TS+LII+ + IE + + Y
Sbjct: 402 TSLLIIISTGIEGMKQLEGY 421
>sp|Q5SHQ8|SECY_THET8 Protein translocase subunit SecY OS=Thermus thermophilus (strain
HB8 / ATCC 27634 / DSM 579) GN=secY PE=1 SV=1
Length = 438
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 196/433 (45%), Gaps = 26/433 (6%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 83
E+R+R+ T +++ R+G FIP PG D I Q++L G V + + G + S
Sbjct: 13 ELRQRVLFTLLVLAAYRLGAFIPTPGVDLDKI-QEFLRTAQGGVFGIINLFSGGNFERFS 71
Query: 84 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY--IWWISLGF---AILE 138
F LGI P I A+I+MQ+L +VP+L +L KEG +G I Y I I+LG L
Sbjct: 72 IFALGIMPYITAAIIMQILVTVVPALEKLSKEGEEGRRIINQYTRIGGIALGAFQGFFLA 131
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
+ + + S V V G + W+ + I+E G G G+SLII G
Sbjct: 132 TAFLGAEGGRFLLPGWSPGPFFWFVVVVTQVAGIALLLWMAERITEYGIGNGTSLIIFAG 191
Query: 199 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 258
I+ + + + + + V F+ L + V + R++ +Q Y K+
Sbjct: 192 IVVEWLPQILRTIGLIRTGEVNLVAFLF-FLAFIVLAFAGMAAVQQAERRIPVQ-YARKV 249
Query: 259 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS-ILGSPFWQHVKEILN 317
T YIP +N +G+ P++ +L P LA+ +P Q + N
Sbjct: 250 VGRRVYGGQAT----YIPIKLNAAGVIPIIFAAAILQIPIFLAAPFQDNPVLQGIANFFN 305
Query: 318 PETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 377
P G V I +V+ FD PK IA+ L + G IP ++PG+ T+++L
Sbjct: 306 PTRPSGLFIEVLLVILFTYVYTAVQFD----PKRIAESLREYGGFIPGIRPGEPTVKFLE 361
Query: 378 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV--LIIVGSIIELRRSYQA 435
I + WG L L ++ T+L ++ + SI F+ + LI+VG ++ R ++
Sbjct: 362 HIVSRLTLWGALFLGLV----TLLPQIIQNLTGIHSIAFSGIGLLIVVGVALDTLRQVES 417
Query: 436 YNVMPSLSKALRR 448
++ S L R
Sbjct: 418 QLMLRSYEGFLSR 430
>sp|Q38885|SCY1_ARATH Preprotein translocase subunit SCY1, chloroplastic OS=Arabidopsis
thaliana GN=SCY1 PE=1 SV=2
Length = 551
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 201/426 (47%), Gaps = 38/426 (8%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LGD 75
FFK + + + +SR+G +IPL G +R +FV G++D+ L
Sbjct: 132 DFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNRE-------AFV-GNLDQNSILSTLDT 183
Query: 76 F--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISL 132
F G +L LGI P I A I+ Q+L + P L L +KEG G +KI Y + S+
Sbjct: 184 FSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQYTRYASV 243
Query: 133 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 192
GFAI++A+ Y PY S + V+ + LL G++ ++I + IS+ G G+S
Sbjct: 244 GFAIVQAIGQVFYLRPY---VNDFSTEWVVSSVTLLTLGSVLTTYIGERISDLKLGNGTS 300
Query: 193 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGV-FTIVTMWAVVVTEGCRKVKL 251
L+I I++ + + ++ L LG + V F ++ + V V E RK+ L
Sbjct: 301 LLIFTSIISYLPASFGRTTAEALQEGNYTG---LGTIVVSFLLLVLGIVYVQEAERKIPL 357
Query: 252 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 311
Y AS + + Y+PF +N +G+ P++ +T LA P+ LA G ++
Sbjct: 358 NY-----ASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKN 412
Query: 312 VKEILNPETSVGARPWVYYTIY--AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPG 369
V L P G ++ I AFF + + + P ++++ L + GA IP V+PG
Sbjct: 413 VAFALTP----GGSFYLPTNILLIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPG 466
Query: 370 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 429
K+T ++ + G L++LA +++ + + TSVLI+VG +
Sbjct: 467 KSTALFIKTVLGRISVLGSAFLAVLAAGPAVVEQ-ITHLTAFRGFAGTSVLILVGCATDT 525
Query: 430 RRSYQA 435
R QA
Sbjct: 526 ARKVQA 531
>sp|P43416|SECY_STRSC Protein translocase subunit SecY OS=Streptomyces scabies GN=secY
PE=3 SV=1
Length = 437
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 205/430 (47%), Gaps = 24/430 (5%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDELGDF- 76
A +F ++R++L T +IVI RIG IP+PG D + D SG + F
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVIYRIGTHIPIPGVDYSAVQFCIDQTKSNSGLFGLVNMFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFA 135
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ A
Sbjct: 66 GGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALA 125
Query: 136 ILEAVIVACYSLPYSIYAASHSVKHVM---------VTAFLLVCGAMTMSWICDTISESG 186
+L+ + + ++++ +++ + G + W+ + I++ G
Sbjct: 126 VLQGTGLVATARSGALFSQCPQANNIVPDDSIFTTLTMVVTMTAGTAVVMWLGELITDRG 185
Query: 187 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
G G S+++ + I + L+ + Q G W ++ V ++ V V +
Sbjct: 186 IGNGMSILMFISIAATFPSALWSIKEQ--GDLAGGWIEFGIVIAVGLVMVALVVFVEQAQ 243
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
R++ +QY + + + YIP +N +G+ PV+ + LL P+++ GS
Sbjct: 244 RRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGIIPVIFASSLLYIPALVVQFSGS 298
Query: 307 PF-WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 365
W + +T+ A VY+ + FF F + I+ P+E+AD + K G IP
Sbjct: 299 TAGWAAWIQKNLADTAAPAHITVYFFLIIFFAFFY--VAISFNPEEVADNMKKYGGFIPG 356
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
++ G+ T EYL+ + + G L L ++A T+ L N+ F G TS+LIIVG
Sbjct: 357 IRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAPLGA-NQNFPFGGTSILIIVGV 415
Query: 426 IIELRRSYQA 435
+E + ++
Sbjct: 416 GLETVKQIES 425
>sp|P38375|SECY_BACHD Protein translocase subunit SecY OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=secY PE=3 SV=2
Length = 430
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 206/430 (47%), Gaps = 32/430 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS--GSVDELGDFGAELKLS 83
++RR++ T +++++ RIG FIP+PG +R ++ D++ + G ++ G GA S
Sbjct: 12 GDLRRKVIFTLLMLIVFRIGSFIPVPGTNREVL--DFVDQANAFGFLNTFGG-GALGNFS 68
Query: 84 FFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
F +GI P I ASI+MQ+L +VP + KEG G K+ + + ++ ++A+ +
Sbjct: 69 IFAMGIMPYITASIVMQLLQMDVVPKFAEWAKEGEAGRRKLAQFTRYGTIVLGFIQALGM 128
Query: 143 AC-YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
+ ++ + + SV + A +L G + W+ + I+ G G G S+II GI
Sbjct: 129 SVGFNNFFPGLIPNPSVSVYLFIALVLTAGTAFLMWLGEQITAKGVGNGISIIIFAGIAA 188
Query: 202 GYTETL---YKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFK 257
G L Y Q G + ++ LL + + + V+ V + RK+ +QY
Sbjct: 189 GIPNGLNLIYSTRIQDAGEQLFLNIVVILLLALAILAIIVGVIFVQQALRKIPVQY---- 244
Query: 258 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS--PFWQHVKEI 315
A +P+ ++P +N +G+ PV+ L FP +A + GS P V E
Sbjct: 245 -AKRLVGRNPVGGQSTHLPLKVNAAGVIPVIFALSLFIFPPTVAGLFGSDHPVAAWVIET 303
Query: 316 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEY 375
+ +G VY + F + + + P+ +A+ L K G IP ++PGKAT Y
Sbjct: 304 FDYTHPIGMA--VYALLIIGFTYFYTFIQVN--PERMAENLKKQGGYIPGIRPGKATQTY 359
Query: 376 LTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE------- 428
+T+I F G L L+++A + + + IG T +LI+VG ++
Sbjct: 360 ITRILYRLTFVGSLFLAVVAILPVFFIKF-ADLPQAIQIGGTGLLIVVGVALDTMKQIEA 418
Query: 429 --LRRSYQAY 436
++RSY+ +
Sbjct: 419 QLIKRSYKGF 428
>sp|P78283|SECY_VIBCH Protein translocase subunit SecY OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=secY PE=3
SV=2
Length = 444
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 201/425 (47%), Gaps = 31/425 (7%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 82
SE++ RLF +++ R G F+P+PG D ++ + + G++ E+ + GA +
Sbjct: 17 SELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQ-QKGTIVEMFNMFSGGALERA 75
Query: 83 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 142
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A +A+ +
Sbjct: 76 SILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGI 135
Query: 143 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 200
A LP + ++ LV G M + W+ + I+E G G G S++I GI+
Sbjct: 136 AT-GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIV 194
Query: 201 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + + + Q + +L + F ++ + V + G R++ + Y A
Sbjct: 195 AGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVI-YFVVFMERGQRRIVVNY-----AK 248
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-----SPF-W-QHVK 313
+ ++P IN +G+ P + + ++ FP LA G S F W V
Sbjct: 249 RQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVS 308
Query: 314 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 371
L+P +P +Y +YA + F F A + P+E AD L K GA +P ++PG+
Sbjct: 309 LALSP-----GQP-LYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQ 362
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +Y+ K+ G L ++ + I + + N F G TS+LI+V I++
Sbjct: 363 TAKYIDKVMTRLTLAGALYITFIC---LIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMA 419
Query: 432 SYQAY 436
Q +
Sbjct: 420 QVQTH 424
>sp|Q9Z7S5|SECY_CHLPN Protein translocase subunit SecY OS=Chlamydia pneumoniae GN=secY
PE=3 SV=1
Length = 457
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 216/458 (47%), Gaps = 45/458 (9%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 76
+ F +E+R++LF T L+ R+G FIP+PG + L + + + +L D
Sbjct: 6 QFFLITELRQKLFYTFALLTACRVGVFIPVPGINGELAVAYFKQLLGSGQNLFQLADIFS 65
Query: 77 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 134
GA +++ LG+ P I ASI++Q+ +P+L + +E D G +I ++
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLFLVFMPALQREMRESSDQGKRRIGRLTRLFTVAL 125
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLV-------------CGAMTMSWICDT 181
A++++++ A ++L ++ + ++ + V G + + WI +
Sbjct: 126 AVIQSLLFAKFALRMNLTIPGIVLPTLLSSKLFGVPWIFYITTVVVMTTGTLLLMWIGEQ 185
Query: 182 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LG---SSVRWWPFMLGLLGVFTIVTM 237
IS+ G G G SLII +GIL+ + L ++++L LG SS +L L VF V +
Sbjct: 186 ISDKGIGNGISLIIALGILSSFPSVLGSIVNKLNLGSQDSSDLGLISILILALVFVFVLI 245
Query: 238 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVE---PYIPFNINPSGMQPVLTTTYLL 294
+++ EG RK+ +QY AR EV Y+P +N +G+ PV+ + LL
Sbjct: 246 TTILIIEGVRKIPVQY--------ARRVIGRREVPGGGSYLPLKVNYAGVIPVIFASSLL 297
Query: 295 AFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PK 350
FP+ + + S + + + +L P + VY Y + F F A P+
Sbjct: 298 MFPATIGQFIASESSWMKRIAALLAPGS------LVYSICYVLLIIFFTYFWTATQFHPE 351
Query: 351 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RIN 409
+IA + K A IP ++ GK T YL G L L+ +A ++L LR N
Sbjct: 352 QIASEMKKNNAFIPGIRQGKPTQHYLEYTMNRVTLLGALFLAAIAILPSLLGCLLRVDSN 411
Query: 410 EGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALR 447
+ +G T++LI+VG +++ + A+ +M L+
Sbjct: 412 VSYFLGGTAMLIVVGVVLDTMKQVDAFLLMRRYDSVLK 449
>sp|P46785|SECY_STRCO Protein translocase subunit SecY OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=secY PE=3 SV=2
Length = 437
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 204/434 (47%), Gaps = 32/434 (7%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG----- 74
A +F ++R++L T +IV+ R+G IP+PG D + + Q+ + SG+ G
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVVYRLGTHIPIPGVDYKNV-QECVDQASGNQGLFGLVNMF 64
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++
Sbjct: 65 SGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYLTVAL 124
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVM------VTAFLLVC---GAMTMSWICDTISES 185
AIL+ + + ++++ ++ T +++C G + W+ + I++
Sbjct: 125 AILQGTGLVATARSGALFSGCTVAGQIVPDQAIFTTVVMVICMTAGTCVVMWLGELITDR 184
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G G S+++ + I + L+ + Q G W ++ V ++ V V +
Sbjct: 185 GIGNGMSILMFISIAATFPSALWAIKKQ--GELADGWIEFGTVILVGLVMVGLVVFVEQA 242
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA---- 301
R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 243 QRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIVQFSN 297
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGA 361
S G W I A P + + F F I+ P+E+AD + K G
Sbjct: 298 STAGWATW-----ITKNLADTAATPHIILYFFLIVFFAFFYVAISFNPEEVADNMKKYGG 352
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G TS+LI
Sbjct: 353 FIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGA-NQNFPFGGTSILI 411
Query: 422 IVGSIIELRRSYQA 435
IVG +E + ++
Sbjct: 412 IVGVGLETVKQIES 425
>sp|Q9HWF5|SECY_PSEAE Protein translocase subunit SecY OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=secY
PE=3 SV=1
Length = 442
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 202/423 (47%), Gaps = 28/423 (6%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGF--DR--RLIPQDYLSFVSGSVDELGDFGAELK 81
SE+ RL + I++ RIG IP+PG DR L Q+ + +S + + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRLAALFRQNEGTILS--LFNMFSGGALER 73
Query: 82 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 141
+S F LGI P I ASI+MQ++ I P L QL+KEG G KI Y + ++ A+++A+
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAISPQLEQLKKEGESGRRKISQYTRYGTVVLALVQAIG 133
Query: 142 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 201
++ L A S+ V V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSV-GLGSQGVAFSNDFGFYFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVA 192
Query: 202 GYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 260
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 193 GLPRAIGQSFESARQGDINIFALIGVGLLAVAIIA--FVVFIERGQRRIAVHY-----AK 245
Query: 261 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQHVKEIL 316
+ ++P +N +G+ P + + +L FP+ L S G + Q V + +
Sbjct: 246 RQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDVAQAI 305
Query: 317 NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 376
P + + ++ F + +F+ PK++A+ L K GA IP ++PG+ + Y+
Sbjct: 306 APGQPLNILLFTAGIVFFCFFYTALMFN----PKDVAENLKKSGAFIPGIRPGEQSARYI 361
Query: 377 TKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVGSIIELRRSYQA 435
+ +G L + T+ +L +L + F +G TS+LI+V +++ Q+
Sbjct: 362 DGVLTRLTMFGALYM----TAVCLLPQFLVVAAHVPFYLGGTSLLIVVVVVMDFMAQVQS 417
Query: 436 YNV 438
+ V
Sbjct: 418 HLV 420
>sp|P49977|SECY_STRLI Protein translocase subunit SecY OS=Streptomyces lividans GN=secY
PE=3 SV=1
Length = 437
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 204/434 (47%), Gaps = 32/434 (7%)
Query: 20 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG----- 74
A +F ++R++L T +IV+ R+G IP+PG D + + Q+ + SG+ G
Sbjct: 6 APAFKTPDLRKKLLFTLGIIVVYRLGTHIPIPGVDYKNV-QECVDQASGNQGLFGLVNMF 64
Query: 75 DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGF 134
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++
Sbjct: 65 SGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRYLTVAL 124
Query: 135 AILEAVIVACYSLPYSIYAASHSVKHVM------VTAFLLVC---GAMTMSWICDTISES 185
AIL+ + + ++++ ++ T +++C G + W+ + I++
Sbjct: 125 AILQGTGLVATARSGALFSGCTVAGQIVPDQAIFTTVVMVICMTAGTCVVMWLGELITDR 184
Query: 186 GFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEG 245
G G G S+++ + I + L+ + Q G W ++ V ++ V V +
Sbjct: 185 GIGNGMSILMFISIAATFPSALWAIKKQ--GELADGWIEFGTVILVGLVMVGLVVFVEQA 242
Query: 246 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA---- 301
R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 243 QRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALIVQFSN 297
Query: 302 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGA 361
S G W I A P + + F F I+ P+E+AD + K G
Sbjct: 298 STAGWATW-----ITKNLADTAATPHIILYFFLIVFFAFFYVAISFNPEEVADNMKKYGG 352
Query: 362 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 421
IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G TS+LI
Sbjct: 353 FIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGA-NQNFPFGGTSILI 411
Query: 422 IVGSIIELRRSYQA 435
IVG +E + ++
Sbjct: 412 IVGVGLETVKQIES 425
>sp|O25879|SECY_HELPY Protein translocase subunit SecY OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=secY PE=3 SV=1
Length = 420
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 210/424 (49%), Gaps = 33/424 (7%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-----AE 79
I ++ +T + + R+ +IP+PG D I F S S + LG F A
Sbjct: 2 NKAIASKILITLGFLFLYRVLAYIPIPGVDLAAIKA---FFDSNSNNALGLFNMFSGNAV 58
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+LS LGI P I +SI+M++L P+L +++KE DG +K + ++++ +++A
Sbjct: 59 SRLSIISLGIMPYITSSIIMELLSATFPNLAKMKKER-DGMQKYMQIVRYLTILITLIQA 117
Query: 140 VIVACYSLPYSIYAASHSVKHV------MVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
V V+ SI ++ + +V+AF ++ G M + WI + I++ G G G SL
Sbjct: 118 VSVSVGL--RSISGGANGAIMIDMQVFMIVSAFSMLTGTMLLMWIGEQITQRGVGNGISL 175
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQ 252
II GI++G + + L+ + V ++G++ + + T++A++ E R++ +
Sbjct: 176 IIFAGIVSGIPSAISGTFN-LVNTGVINILMLIGIV-LIVLATIFAIIYVELAERRIPIS 233
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS-ILASILGSPFWQH 311
Y A + + YIP +N SG+ P + + LL FPS IL + Q
Sbjct: 234 Y-----ARKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASALLVFPSTILQQATSNKTLQA 288
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKA 371
V + L+P+ A + + + FF + ++ I K+IAD L + G IP ++PG+
Sbjct: 289 VADFLSPQGY--AYNILMFLLIIFFAYFYS--SIVFNSKDIADNLRRNGGYIPGLRPGEG 344
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +L + + WG L L++++T IL ++ + F G T+VLI+V I+ +
Sbjct: 345 TSSFLNSVASKLTLWGSLYLALISTVPWIL---VKAMGVPFYFGGTAVLIVVQVAIDTMK 401
Query: 432 SYQA 435
+A
Sbjct: 402 KIEA 405
>sp|P0A5Z2|SECY_MYCTU Protein translocase subunit SecY OS=Mycobacterium tuberculosis
GN=secY PE=3 SV=1
Length = 441
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 203/450 (45%), Gaps = 63/450 (14%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---------G 77
++RR++ T ++++ R+G +P PG + P S E G G
Sbjct: 13 DLRRKILFTLGIVILYRVGAALPSPGVN---FPNVQQCIKEASAGEAGQIYSLINLFSGG 69
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
A LKL+ F +G+ P I ASI++Q+L ++P +LRKEG G K+ Y ++++ AIL
Sbjct: 70 ALLKLTVFAVGVMPYITASIIVQLLTVVIPRFEELRKEGQAGQSKMTQYTRYLAIALAIL 129
Query: 138 EAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
+A + + + A S+ ++V ++ GA + W+ + I+E G G G
Sbjct: 130 QATSIVALAANGGLLQGCSLDIIADQSIFTLVVIVLVMTGGAALVMWMGELITERGIGNG 189
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SL+I VGI +L R + I+ + V V +G R++
Sbjct: 190 MSLLIFVGIAARIPAEGQSILES------RGGVVFTAVCAAALIIIVGVVFVEQGQRRIP 243
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL-------ASI 303
+QY A Y+P +N +G+ PV+ + L+ P ++ + +
Sbjct: 244 VQY-----AKRMVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLIRSGSGV 298
Query: 304 LGSPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMG 360
+G+ +W V L+ +++ VY IY + F F I P E AD + K G
Sbjct: 299 VGNSWWDKFVGTYLSDPSNL-----VYIGIYFGLIIFFTYFYVSITFNPDERADEMKKFG 353
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI-----G 415
IP ++PG+ T +YL + + G + L ++A +L + +I G ++ G
Sbjct: 354 GFIPGIRPGRPTADYLRYVLSRITLPGSIYLGVIA----VLPNLFLQIGAGGTVQNLPFG 409
Query: 416 FTSVLIIVGSIIE---------LRRSYQAY 436
T+VLI++G ++ ++R+Y+ +
Sbjct: 410 GTAVLIMIGVGLDTVKQIESQLMQRNYEGF 439
>sp|P0A5Z3|SECY_MYCBO Protein translocase subunit SecY OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=secY PE=3 SV=1
Length = 441
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 203/450 (45%), Gaps = 63/450 (14%)
Query: 27 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---------G 77
++RR++ T ++++ R+G +P PG + P S E G G
Sbjct: 13 DLRRKILFTLGIVILYRVGAALPSPGVN---FPNVQQCIKEASAGEAGQIYSLINLFSGG 69
Query: 78 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 137
A LKL+ F +G+ P I ASI++Q+L ++P +LRKEG G K+ Y ++++ AIL
Sbjct: 70 ALLKLTVFAVGVMPYITASIIVQLLTVVIPRFEELRKEGQAGQSKMTQYTRYLAIALAIL 129
Query: 138 EAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 190
+A + + + A S+ ++V ++ GA + W+ + I+E G G G
Sbjct: 130 QATSIVALAANGGLLQGCSLDIIADQSIFTLVVIVLVMTGGAALVMWMGELITERGIGNG 189
Query: 191 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 250
SL+I VGI +L R + I+ + V V +G R++
Sbjct: 190 MSLLIFVGIAARIPAEGQSILES------RGGVVFTAVCAAALIIIVGVVFVEQGQRRIP 243
Query: 251 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL-------ASI 303
+QY A Y+P +N +G+ PV+ + L+ P ++ + +
Sbjct: 244 VQY-----AKRMVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLIRSGSGV 298
Query: 304 LGSPFWQH-VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMG 360
+G+ +W V L+ +++ VY IY + F F I P E AD + K G
Sbjct: 299 VGNSWWDKFVGTYLSDPSNL-----VYIGIYFGLIIFFTYFYVSITFNPDERADEMKKFG 353
Query: 361 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI-----G 415
IP ++PG+ T +YL + + G + L ++A +L + +I G ++ G
Sbjct: 354 GFIPGIRPGRPTADYLRYVLSRITLPGSIYLGVIA----VLPNLFLQIGAGGTVQNLPFG 409
Query: 416 FTSVLIIVGSIIE---------LRRSYQAY 436
T+VLI++G ++ ++R+Y+ +
Sbjct: 410 GTAVLIMIGVGLDTVKQIESQLMQRNYEGF 439
>sp|P27148|SECY_LACLC Protein translocase subunit SecY OS=Lactococcus lactis subsp.
cremoris GN=secY PE=3 SV=3
Length = 439
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 208/430 (48%), Gaps = 29/430 (6%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-DYLSFVSGSVDELGDFGAE 79
E+F ++R R+ T ++ + R+G I PG + + + Q L F+S + L A
Sbjct: 8 EAFKVKDVRARILFTIFILFVFRLGAHITAPGVNVQNLQQVADLPFLS--MMNLVSGNAM 65
Query: 80 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +I+L A+ +
Sbjct: 66 QNYSLFAMGVSPYITASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYITLVLAMAQ 125
Query: 139 AV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 196
++ I A + S+ + + + ++ LL G+M ++W+ + I+E GFG G S+II
Sbjct: 126 SIGITAGFQAMSSLNIVQNPNWQSYLMIGVLLTTGSMVVTWMGEQINEKGFGSGVSVIIF 185
Query: 197 VGILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRK 248
GI++G Y E + + S W F++GL+ ++ V + RK
Sbjct: 186 AGIVSGIPSAIKSVYDEKFLNVRPSEIPMS---WIFVIGLILSAIVIIYVTTFVQQAERK 242
Query: 249 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 308
V +QY KL A S Y+P +NP+G+ PV+ + P+ + L
Sbjct: 243 VPIQYT--KLTQGAPTSS-------YLPLRVNPAGVIPVIFAGSITTAPATILQFLQRSQ 293
Query: 309 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGARIPNV 366
+V + + ++ W YA + LF F + P+++A+ L K G+ IP+V
Sbjct: 294 GSNVGWLSTLQNALSYTTWTGMLFYALLIVLFTFFYSFVQVNPEKMAENLQKQGSYIPSV 353
Query: 367 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 426
+PGK T +Y++++ G L L +++ I + + + ++G TS+LI++
Sbjct: 354 RPGKGTEKYVSRLLMRLATVGSLFLGLISIIP-IAAQNVWGLPKIVALGGTSLLILIQVA 412
Query: 427 IELRRSYQAY 436
I+ + + Y
Sbjct: 413 IQAVKQLEGY 422
>sp|Q9ZJS9|SECY_HELPJ Protein translocase subunit SecY OS=Helicobacter pylori (strain
J99) GN=secY PE=3 SV=1
Length = 420
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 210/424 (49%), Gaps = 33/424 (7%)
Query: 25 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-----AE 79
I ++ +T + + R+ +IP+PG D I F S S + LG F A
Sbjct: 2 NKAIASKILITLGFLFLYRVLAYIPIPGVDLAAIKA---FFDSNSNNALGLFNMFSGNAV 58
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 139
+LS LGI P I +SI+M++L P+L +++KE DG +K + ++++ +++A
Sbjct: 59 SRLSIISLGIMPYITSSIIMELLSATFPNLAKMKKER-DGMQKYMQIVRYLTILITLIQA 117
Query: 140 VIVACYSLPYSIYAASHSVKHV------MVTAFLLVCGAMTMSWICDTISESGFGQGSSL 193
V V+ SI ++ + +V+AF ++ G M + WI + I++ G G G SL
Sbjct: 118 VSVSVGL--RSISGGANGAIMIDMQVFMIVSAFSMLTGTMLLMWIGEQITQRGVGNGISL 175
Query: 194 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQ 252
II GI++G + + L+ + V ++G++ + + T++A++ E R++ +
Sbjct: 176 IIFAGIVSGIPSAISGTFN-LVNTGVINILMLIGIV-LIVLATIFAIIYVELAERRIPIS 233
Query: 253 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS-ILASILGSPFWQH 311
Y A + + YIP +N SG+ P + + LL FPS IL + Q
Sbjct: 234 Y-----ARKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASALLVFPSTILQQATSNKTLQA 288
Query: 312 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKA 371
+ + L+P+ A + + + FF + ++ I K+IAD L + G IP ++PG+
Sbjct: 289 IADFLSPQGY--AYNILMFLLIIFFAYFYS--SIVFNSKDIADNLRRNGGYIPGLRPGEG 344
Query: 372 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 431
T +L + + WG L L++++T IL ++ + F G T+VLI+V I+ +
Sbjct: 345 TSSFLNAVASKLTLWGSLYLALISTVPWIL---VKAMGVPFYFGGTAVLIVVQVAIDTMK 401
Query: 432 SYQA 435
+A
Sbjct: 402 KIEA 405
>sp|P49461|SECY_ODOSI Protein translocase subunit SecY OS=Odontella sinensis GN=secY PE=3
SV=1
Length = 425
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 204/411 (49%), Gaps = 40/411 (9%)
Query: 43 RIGYFIPLPGFDRRLIP---QDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILM 99
R+G F+P+PG D + + + + GD + + F L I P I ASI+M
Sbjct: 25 RMGTFLPVPGIDHGHLEFYIERHFRLRTLVSTFAGD--NTVVVGLFTLNIFPYINASIIM 82
Query: 100 QVLCHIVPSLVQLRKEG-LDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSV 158
Q+L ++P L +L+KEG + I S ++LG++++++ VA Y L +++ +
Sbjct: 83 QLLVSLLPGLSKLQKEGGAEARRSINSLTRLLTLGWSLIQSTSVAFY-LKRALFEWN--- 138
Query: 159 KHVMVTAFLLV----CGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQL 214
+V AF +V GAM + W+ + I+E G G G SL+I I++ +L + Q+
Sbjct: 139 ---LVLAFEIVIWLTTGAMIVLWLSEIITEYGLGNGPSLLIYTNIVS----SLPGFVKQV 191
Query: 215 LGSSVRWWPFMLGLLGVFTI-VTMWAVVV-TEGCRKVKL-QYYGFKLASAAREDSPITEV 271
+ S P LL F + V ++ +V+ EG RKV L S S E
Sbjct: 192 ITESSGKVPIGSWLLSGFVLFVALYGIVLLQEGMRKVYLISSKQLNQTSLPFSGSSNLES 251
Query: 272 EPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETS----VGARPW 327
YIP N +G+ P++ TT +L P+ + ++ + IL P + V +
Sbjct: 252 GYYIPLRFNQAGVMPIILTTAVLVIPTFIYNL-------GLLRILTPLITLPVFVKSYKI 304
Query: 328 VYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRF 385
+Y+ Y + LF++F I PK+++D L KM IP ++PG T YL ++
Sbjct: 305 IYWVSYFVLILLFSLFYSTIVVNPKDLSDELQKMAVSIPGIRPGVETTFYLKQVMKRVTL 364
Query: 386 WGGLLLSILATSSTILDHYLRRINEGFS-IGFTSVLIIVGSIIELRRSYQA 435
G ++L++LAT I+ L GF+ +G TS+LI+VG I++L R ++
Sbjct: 365 LGAIMLALLATLPNIIQAILSL--SGFTNLGTTSLLILVGVILDLTREMRS 413
>sp|P93690|SECY_SPIOL Preprotein translocase subunit SECY, chloroplastic OS=Spinacia
oleracea GN=SECY PE=2 SV=1
Length = 545
Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 201/432 (46%), Gaps = 50/432 (11%)
Query: 22 SFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAE 79
FFK + + L+ +SR+G ++PL G +R D SF+S ++D G
Sbjct: 129 DFFKGPLPGKFLTLLGLLALSRLGIYVPLGGVNREAFVGNLDQNSFIS-TLDSFSG-GGI 186
Query: 80 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILE 138
+L LGI P I A I+ Q+L + P L L +KEG G +KIK Y + S+GFA+++
Sbjct: 187 GRLGICSLGIVPFINAQIVFQLLSQVYPKLQDLQKKEGEAGRKKIKQYTQYASVGFALVQ 246
Query: 139 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 198
A+ + PY +S + V+ + LL G++ +++ + IS+ G G+SL+I
Sbjct: 247 AIGQVLFLRPY---VNDYSTEWVLSSVILLTLGSVFTTYLGERISDLKLGNGTSLLIFTN 303
Query: 199 ILT------------GYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 246
I++ Y E Y L+ ++ S V VF IV V E
Sbjct: 304 IISYLPASFGRTVAEAYQEGNYTGLAIIVVSFVSL---------VFGIV-----YVQEAE 349
Query: 247 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 306
RK+ + Y AS S + Y+PF +N +G+ P++ +T L+ P+ LA G
Sbjct: 350 RKIPMNY-----ASRYSGKSGGLQKSAYLPFKVNSAGVMPIIFSTSSLSLPATLARFTGL 404
Query: 307 PFWQHVKEILNPETSVGARPWVYYTIY--AFFVFLFNIFDIANLPKEIADYLNKMGARIP 364
+ L P G ++ I AFF + + + P ++++ L + GA IP
Sbjct: 405 DILKKAAVALTP----GGSFYLPTNILLIAFFNYYYTFLQLD--PDDVSEQLKRQGASIP 458
Query: 365 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIV 423
V+PGK+T Y+ + + G L+ILA +++ GF+ TSVLI+V
Sbjct: 459 LVRPGKSTAAYIKTVLSRISVLGSGFLAILAAGPAVVEQATHLTAFRGFA--GTSVLILV 516
Query: 424 GSIIELRRSYQA 435
G + R QA
Sbjct: 517 GCATDTARKVQA 528
>sp|P58118|SECY_LACLA Protein translocase subunit SecY OS=Lactococcus lactis subsp.
lactis (strain IL1403) GN=secY PE=3 SV=1
Length = 439
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 208/431 (48%), Gaps = 31/431 (7%)
Query: 21 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDFGAE 79
E+F ++R R+ T ++ + R+G I +PG + + L L F++ + L A
Sbjct: 8 EAFKVKDVRARILFTIFILFVFRLGAHITVPGVNVQNLTEVSNLPFLN--MMNLVSGNAM 65
Query: 80 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 138
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +I+L A+ +
Sbjct: 66 QNYSLFAMGVSPYITASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYITLVLAMAQ 125
Query: 139 AV-IVACYSLPYSIYAASHS--VKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 195
++ I A + S+ + ++M+ A +L G+M ++W+ + I+E GFG G S+II
Sbjct: 126 SIGITAGFQAMSSLNIVQNPNWQSYLMIGA-ILTTGSMVVTWMGEQINEKGFGSGVSVII 184
Query: 196 CVGILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 247
GI++ Y E + + S W F++GL+ I+ V + R
Sbjct: 185 FAGIVSSIPSAVKSVYDEKFLNVRPSEIPMS---WLFVIGLVLSAIIIIYVTTFVQQAER 241
Query: 248 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 307
KV +QY KL A S Y+P +NP+G+ PV+ + P+ + L
Sbjct: 242 KVPIQYT--KLTQGAPTSS-------YLPLRVNPAGVIPVIFAGSITTAPATILQFLQRS 292
Query: 308 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGARIPN 365
+V + + ++ W YA + LF F + P+++A+ L K G+ IP+
Sbjct: 293 QGSNVGWLSTLQDALSYTTWTGMLFYALLIVLFTFFYSFVQVNPEKMAENLQKQGSYIPS 352
Query: 366 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 425
V+PGK T +Y++++ G L L +++ I + + + ++G TS+LI++
Sbjct: 353 VRPGKGTEKYVSRLLMRLATVGALFLGLISIIP-IAAQNVWGLPKIVALGGTSLLILIQV 411
Query: 426 IIELRRSYQAY 436
I+ + + Y
Sbjct: 412 AIQAVKQLEGY 422
>sp|P16336|SECY_BACSU Protein translocase subunit SecY OS=Bacillus subtilis (strain 168)
GN=secY PE=3 SV=1
Length = 431
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 205/433 (47%), Gaps = 38/433 (8%)
Query: 26 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRR-LIPQDYLSFVSGSVDELGDFG--AELKL 82
S+IR ++ T +++++ RIG FIP+P + L Q + G D L FG A +
Sbjct: 12 SDIRNKIIFTLLMLIVFRIGAFIPVPYVNAEALQAQSQM----GVFDLLNTFGGGALYQF 67
Query: 83 SFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILEA 139
S F +GI+P I ASI++Q+L +VP + K+G G K+ + + I LGF
Sbjct: 68 SIFAMGITPYITASIIIQLLQMDVVPKFTEWSKQGEVGRRKLAQFTRYFTIVLGFIQALG 127
Query: 140 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 199
+ +L + V ++ A +L G + W+ + I+ G G G S+II GI
Sbjct: 128 MSYGFNNLANGMLIEKSGVSTYLIIALVLTGGTAFLMWLGEQITSHGVGNGISIIIFAGI 187
Query: 200 LTGYTETLYKML-SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV-----TEGCRKVKLQY 253
++ +T+ ++ +Q +GS+ + + ++ + ++ + AV+V + RK+ +QY
Sbjct: 188 VSSIPKTIGQIYETQFVGSNDQLFIHIVKV--ALLVIAILAVIVGVIFIQQAVRKIAIQY 245
Query: 254 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-PFWQHV 312
A ++P +NP+G+ PV+ L P +AS G+ + +
Sbjct: 246 -----AKGTGRSPAGGGQSTHLPLKVNPAGVIPVIFAVAFLITPRTIASFFGTNDVTKWI 300
Query: 313 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 372
+ + VG +Y + F + + + P+++AD L K G IP V+PGK T
Sbjct: 301 QNNFDNTHPVGMA--IYVALIIAFTYFYAFVQVN--PEQMADNLKKQGGYIPGVRPGKMT 356
Query: 373 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE---- 428
+ +T I F G + L++++ + + + IG TS+LI+VG +E
Sbjct: 357 QDRITSILYRLTFVGSIFLAVISILPIFFIQF-AGLPQSAQIGGTSLLIVVGVALETMKQ 415
Query: 429 -----LRRSYQAY 436
++R+Y+ +
Sbjct: 416 LESQLVKRNYRGF 428
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 157,537,152
Number of Sequences: 539616
Number of extensions: 6419442
Number of successful extensions: 19601
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 19076
Number of HSP's gapped (non-prelim): 136
length of query: 451
length of database: 191,569,459
effective HSP length: 121
effective length of query: 330
effective length of database: 126,275,923
effective search space: 41671054590
effective search space used: 41671054590
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)