Query 013037
Match_columns 451
No_of_seqs 179 out of 1349
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 03:01:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013037.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013037hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_A Tubulin alpha chain; al 100.0 1E-123 4E-128 953.8 28.2 451 1-451 1-451 (451)
2 3ryc_B Tubulin beta chain; alp 100.0 9E-121 3E-125 930.8 25.9 433 1-443 1-433 (445)
3 3cb2_A Gamma-1-tubulin, tubuli 100.0 5E-110 2E-114 862.2 31.3 433 1-441 2-444 (475)
4 2btq_B Tubulin btubb; structur 100.0 5E-108 2E-112 841.1 23.4 423 1-435 1-425 (426)
5 2bto_A Tubulin btuba; bacteria 100.0 4E-107 1E-111 842.1 26.9 429 1-443 3-438 (473)
6 1w5f_A Cell division protein F 100.0 1.6E-42 5.5E-47 345.8 12.5 287 1-361 21-314 (353)
7 2vap_A FTSZ, cell division pro 100.0 1.9E-42 6.4E-47 345.9 12.9 283 3-361 39-327 (364)
8 2r75_1 Cell division protein F 100.0 1.1E-42 3.6E-47 346.1 9.1 296 3-381 9-311 (338)
9 1ofu_A FTSZ, cell division pro 100.0 1.5E-41 5E-46 335.8 14.1 295 3-379 13-313 (320)
10 1rq2_A Cell division protein F 100.0 1.2E-41 4.2E-46 341.6 10.9 286 2-361 12-302 (382)
11 2vaw_A FTSZ, cell division pro 100.0 5.2E-41 1.8E-45 338.3 14.1 298 2-380 12-314 (394)
12 2vxy_A FTSZ, cell division pro 100.0 7.2E-41 2.5E-45 336.0 13.6 286 2-361 12-302 (382)
13 3m89_A FTSZ/tubulin-related pr 100.0 7.5E-37 2.6E-41 305.8 11.3 278 4-328 45-356 (427)
14 3v3t_A Cell division GTPase FT 100.0 3.9E-30 1.3E-34 253.0 11.6 195 4-259 7-207 (360)
15 4dxd_A Cell division protein F 100.0 5.5E-30 1.9E-34 254.5 10.5 267 3-337 19-290 (396)
16 4ei7_A Plasmid replication pro 99.8 1.1E-18 3.8E-23 176.3 9.0 222 4-263 18-247 (389)
17 3r4v_A Putative uncharacterize 99.2 5E-12 1.7E-16 119.9 5.8 174 3-240 4-177 (315)
18 2e4h_B Tubulin alpha-ubiquitou 97.6 3.9E-05 1.3E-09 49.9 3.7 35 416-450 1-35 (36)
19 3bed_A PTS system, IIA compone 66.3 4.4 0.00015 34.2 3.6 31 114-145 44-74 (142)
20 1pdo_A Mannose permease; phosp 65.8 9.8 0.00034 31.6 5.6 31 115-145 41-71 (135)
21 3lfh_A Manxa, phosphotransfera 56.4 8.2 0.00028 32.7 3.5 35 115-149 43-78 (144)
22 3ipr_A PTS system, IIA compone 49.2 13 0.00046 31.5 3.7 39 115-153 41-79 (150)
23 3gx1_A LIN1832 protein; APC633 47.7 23 0.0008 29.2 4.9 39 114-154 43-81 (130)
24 2nx2_A Hypothetical protein YP 46.6 88 0.003 27.2 8.8 111 116-242 26-138 (181)
25 3mtq_A Putative phosphoenolpyr 46.1 9.3 0.00032 33.0 2.2 31 116-146 61-91 (159)
26 3g7n_A Lipase; hydrolase fold, 45.1 15 0.00051 34.2 3.6 61 106-170 98-158 (258)
27 3uue_A LIP1, secretory lipase 42.4 10 0.00036 35.7 2.1 61 106-170 112-172 (279)
28 3gdw_A Sigma-54 interaction do 33.8 42 0.0015 28.0 4.4 39 114-154 43-83 (139)
29 3b48_A Uncharacterized protein 33.0 19 0.00064 29.9 2.0 27 118-145 50-76 (135)
30 3ct6_A PTS-dependent dihydroxy 30.9 30 0.001 28.6 2.9 26 118-145 45-70 (131)
31 3f1i_H Hepatocyte growth facto 27.1 38 0.0013 26.4 2.6 53 378-435 30-91 (98)
32 2aot_A HMT, histamine N-methyl 25.8 90 0.0031 28.7 5.7 59 116-175 34-92 (292)
33 3o0d_A YALI0A20350P, triacylgl 24.4 34 0.0012 32.5 2.4 52 112-167 134-185 (301)
34 2p10_A MLL9387 protein; putati 23.9 33 0.0011 32.4 2.1 34 115-156 13-46 (286)
35 1uwc_A Feruloyl esterase A; hy 20.7 43 0.0015 30.9 2.2 44 112-159 105-148 (261)
36 1tia_A Lipase; hydrolase(carbo 20.4 63 0.0022 30.1 3.3 53 104-160 109-161 (279)
No 1
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=1.1e-123 Score=953.82 Aligned_cols=451 Identities=85% Similarity=1.404 Sum_probs=423.4
Q ss_pred CeeEEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeecccc
Q 013037 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (451)
Q Consensus 1 M~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~ 80 (451)
|||||+||+||||||||.+||+++|.||+|+++|.++.+.......+++++||+|++.++|+||||||||||+||++++.
T Consensus 1 mrEii~iqvGQcGnQIG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~~~fF~e~~~gk~vPRavlvDlEp~vid~v~~ 80 (451)
T 3ryc_A 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (451)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTSCCCCC-------CGGGGTEEECTTSCEEESEEEEESSSHHHHHHHH
T ss_pred CceEEEEeccCchhHHHHHHHHHHHhhcCCCCCCCcCCcccccccccchhhhcccCCCCccccceeeecCCcchhheeee
Confidence 99999999999999999999999999999999998876654323467899999999999999999999999999999999
Q ss_pred ccccccCCccceecccccccCCCcccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHhhhh
Q 013037 81 GTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~de 160 (451)
|+++.+|+|++++++++|+|||||+|||+.|+++.|+++|+||+++|+||++|||+++||+|||||||+|+.|+|.|+++
T Consensus 81 g~~~~lf~p~~~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~e 160 (451)
T 3ryc_A 81 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD 160 (451)
T ss_dssp STTTTTSCGGGEEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHH
T ss_pred cccccccCHHHeeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhhHhhhhccCCCCCCCcchhhHHHHHHHhhccc
Q 013037 161 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240 (451)
Q Consensus 161 y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 240 (451)
||++.+++++|+|++..+++++++||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++|+++|+
T Consensus 161 y~kk~~~~~~v~P~~~~s~~vvepYNa~Lsl~~L~e~sD~~~~idNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~ 240 (451)
T 3ryc_A 161 YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240 (451)
T ss_dssp TTTCEEEEEEEECCTTTCCCTTHHHHHHHHHHHHGGGCSEEEEEEHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEEEEecCCCcccccceehHHHHHHHHHHhcccceeEeccHHHHHHHHHhccCCCCCchhhHHHHHhccccccc
Confidence 99999999999999877899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCccchhhhhcCCCCCCcccccccccccccccccccccccCHHHHHHhhcCCCCCCcccCCCCCcccceecccc
Q 013037 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 320 (451)
Q Consensus 241 ~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~s~~Pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~R 320 (451)
++||||.+|.||.+|.+|||||||+||+.++|+|+++..+..++++++.+|++++|+++|+|++|+|++|+|+++++++|
T Consensus 241 slRf~G~lN~Dl~~l~tnLVP~PrlHF~~~s~aPl~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~R 320 (451)
T 3ryc_A 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320 (451)
T ss_dssp HHHTTCSSSCSHHHHHHHHCSSSSCCCCEEEEECCCBSSSCCCCCCCHHHHHHHTTCGGGBSSCCCGGGSCEEEEEEEEE
T ss_pred ccccCcccccCHHHHhhccCCCCceeeeccccCccccccccccccCCHHHHHHHHhccccceEecCCCCCchheehhhcc
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred CcCChhhHHHHHHhhhhcCccccccCCCCCCceeEeccCCccCCCCCcccccceeEeecCChhhHHHHHHHHHHHHHHhh
Q 013037 321 GDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYA 400 (451)
Q Consensus 321 G~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~Nst~i~~~l~~l~~~~~~m~~ 400 (451)
|+++++++++++..++.|++..|++|+|++||+++|.+||...+++++++.++++|+|+|+|+|.+.|+++.++|++||+
T Consensus 321 G~v~~~dv~~~i~~ik~k~~~~Fv~W~p~~~kv~i~~~pP~~~p~~~la~~~~s~~~lsNsTaI~~~f~rl~~kFd~m~~ 400 (451)
T 3ryc_A 321 GDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 400 (451)
T ss_dssp ESCCHHHHHHHHHHHHHHCCCCBCTTSCEEEEEEEECSCCCCCTTSSBCCCSEEEEEEEEEGGGHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHhhcCCcceEEEccCceeeeeeccCCccCCCccccccceeeEEecCchHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceecccccccChhhHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCC
Q 013037 401 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEDGDEGDEY 451 (451)
Q Consensus 401 ~kAflH~Y~~~Gmee~eF~Ea~~~l~~li~~Y~~~~~~~~~~~~~~~~~~~ 451 (451)
||||||||++|||||+||.||+++|++|+++|++++.+..|++++||+.||
T Consensus 401 krAFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~~~~~~~~~~ 451 (451)
T 3ryc_A 401 KRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY 451 (451)
T ss_dssp TTTTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCC-------------
T ss_pred cceeHhhhcCCccchhhHHHHHHHHHHHHHHHHHHhcCCCcccccccccCC
Confidence 999999999999999999999999999999999999877655555545443
No 2
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=9.1e-121 Score=930.77 Aligned_cols=433 Identities=42% Similarity=0.818 Sum_probs=417.7
Q ss_pred CeeEEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeecccc
Q 013037 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (451)
Q Consensus 1 M~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~ 80 (451)
|||||+||+||||||||.+||+++|.||+|+++|.++.+.+. +.+++++||+|++.++|+|||||||+||+||++++.
T Consensus 1 mrEii~i~vGQcGnQiG~~~We~~~~EHgi~~~g~~~~~~~~--~~~~~~~fF~e~~~~~~vpRavlvDlEp~vid~i~~ 78 (445)
T 3ryc_B 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDL--QLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRS 78 (445)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSBBCCSCTH--HHHTGGGTEEECSTTBEEECEEEEESSSHHHHHHHT
T ss_pred CceEEEEecCCcHHHHHHHHHHHHHHHhCCCCCCCccCCccc--cccchhhccccCCCCccccceeEecCCchhhhhhhc
Confidence 999999999999999999999999999999999988765442 356789999999999999999999999999999999
Q ss_pred ccccccCCccceecccccccCCCcccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHhhhh
Q 013037 81 GTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~de 160 (451)
++++.+|+|++++++++|+|||||+|||+.|+++.|+++|+||+++|+||++|||+++||+|||||||+|+.|+|.|+++
T Consensus 79 g~~~~lf~p~~~i~g~~gAgNN~A~G~yt~G~e~~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~e 158 (445)
T 3ryc_B 79 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREE 158 (445)
T ss_dssp STTGGGSCGGGEEECSSCCTTCHHHHHHSHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHH
T ss_pred ccccceecccceEEccccccCCccccchhhhHHHHHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhhHhhhhccCCCCCCCcchhhHHHHHHHhhccc
Q 013037 161 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240 (451)
Q Consensus 161 y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 240 (451)
||++.+++++|+|++..++++++|||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||+.|+++|+
T Consensus 159 y~kk~~~~~sV~Psp~~s~~vvepYNa~Lsl~~L~e~sD~~~~iDNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~ 238 (445)
T 3ryc_B 159 YPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238 (445)
T ss_dssp CTTSEEEEEEEECCGGGCSCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCccccceEEEEeCCccccccccchhhhhhHhhhhcccceeEeecchhHHHHHHhccCCCCCcchhhHHHHHhcchhhcc
Confidence 99999999999999877899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCccchhhhhcCCCCCCcccccccccccccccccccccccCHHHHHHhhcCCCCCCcccCCCCCcccceecccc
Q 013037 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 320 (451)
Q Consensus 241 ~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~s~~Pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~R 320 (451)
++||||.+|.||.+|.+|||||||+||+.++|+|+++..+..++++++.+|++++|+++|+|++|+|+.|+|+++++++|
T Consensus 239 slRf~G~lN~Dl~~l~tnLVP~PrlhF~~~s~aP~~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~R 318 (445)
T 3ryc_B 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVATIFR 318 (445)
T ss_dssp HHHSCCSSSCSHHHHHHHHCSSTTCCEEEEEEESCCCTTCCCCCCCCHHHHHHHTTSGGGBSSSCCGGGSCEEEEEEEEE
T ss_pred ccccCcccccCHHHHhhcccCCCceeeeccccCcccccchhhhccCCHHHHHHHHHhhcCCeeecCCCCCcceeeeeeee
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred CcCChhhHHHHHHhhhhcCccccccCCCCCCceeEeccCCccCCCCCcccccceeEeecCChhhHHHHHHHHHHHHHHhh
Q 013037 321 GDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYA 400 (451)
Q Consensus 321 G~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~Nst~i~~~l~~l~~~~~~m~~ 400 (451)
|++++++++.++..++.|++..|++|+|+++|+++|.+||... ++++|+|+|+|+|.+.|+++.+||++||+
T Consensus 319 G~v~~kdv~~~i~~ik~k~~~~Fv~W~p~~~k~~i~~~pp~~~--------~~s~~~lsNsTaI~~~~~rl~~kFd~m~~ 390 (445)
T 3ryc_B 319 GRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL--------KMSSTFIGNSTAIQELFKRISEQFTAMFR 390 (445)
T ss_dssp ESCCHHHHHHHHHHHHHHTGGGBCTTSTTCEEEEEESSCCTTC--------SEEEEEEEEEGGGHHHHHHHHHHHHHHHT
T ss_pred cCCChHHHHHHHHHHHhhCcccCcccCCCceeeeeeccCCccc--------ceeeeeecCcHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999998754 68999999999999999999999999999
Q ss_pred cccceecccccccChhhHHHHHHHHHHHHHHHHHHccCCCCCC
Q 013037 401 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGE 443 (451)
Q Consensus 401 ~kAflH~Y~~~Gmee~eF~Ea~~~l~~li~~Y~~~~~~~~~~~ 443 (451)
||||||||++|||||+||.||+++|++|+++|++++....+++
T Consensus 391 krAFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~~ 433 (445)
T 3ryc_B 391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQ 433 (445)
T ss_dssp TTTTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHCCTTC-
T ss_pred cccchhhhhccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 9999999999999999999999999999999999987765553
No 3
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=4.9e-110 Score=862.18 Aligned_cols=433 Identities=31% Similarity=0.601 Sum_probs=404.0
Q ss_pred CeeEEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeecccc
Q 013037 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (451)
Q Consensus 1 M~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~ 80 (451)
|||||+||+||||||||++||++++.||+++++|..+.+.. .+.+++++||+|++.++|+||||+||+||++|+.++.
T Consensus 2 ~rEiItiqvGQ~GnqIG~~fWe~~~~Ehgi~~~g~~~~~~~--~~~~~~~vfF~e~~~~~yvPRavlvDLEp~vid~i~~ 79 (475)
T 3cb2_A 2 PREIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFAT--EGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILN 79 (475)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSCBCTTCC--TTSSCGGGTEEECTTSCEEECEEEEESSSHHHHHHHH
T ss_pred CccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCCcCccc--ccccccceeeeecCCCceecceeEecCCcceeeeecc
Confidence 79999999999999999999999999999999997765332 2456899999999999999999999999999999999
Q ss_pred ccccccCCccceecccc--cccCCCcccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHhh
Q 013037 81 GTYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~--g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~ 158 (451)
++++.+|+|++++.+++ |+||||++| |+.|++..|+++|+||+++|+||.+|||+|+||+|||||||+|+.|+|.|+
T Consensus 80 ~~~~~lf~p~~~i~g~~g~gAgnn~a~G-~~~g~e~~d~~~d~Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~ 158 (475)
T 3cb2_A 80 SPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLN 158 (475)
T ss_dssp STTTTTSCGGGEEECCTTCCCTTCHHHH-HHHHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred ccccccCCccceeecccccCCCCCchhh-hhhhHhhHHHHHHHHHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHH
Confidence 99999999999999987 799999999 478999999999999999999999999999999999999999999999999
Q ss_pred hhcCCcceeEEEEecCCC-CCCccchhhHHHHHHHHhhccCCeeeeecchhhHhhhhccCCCCCCCcchhhHHHHHHHhh
Q 013037 159 VDYGKKSKLGFTVYPSPQ-VSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISS 237 (451)
Q Consensus 159 dey~~~~i~~~~v~P~~~-~~~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~ 237 (451)
|+||++.+++++|+|+.. .++.++++||++|++++|.+++|++|++||++|+++|.+.+++..++|.++|++||++|++
T Consensus 159 dey~~k~~lt~~V~P~~~e~se~vv~~yNa~lsl~~L~e~sD~~i~idNeaL~~i~~~~l~i~~p~f~~~N~lia~~vs~ 238 (475)
T 3cb2_A 159 DRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSA 238 (475)
T ss_dssp HHSTTSEEEEEEEECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHH
T ss_pred HHcCCCceEEEEEECCccccccceeehhHhHHHHHHHHhhCCEEEEeccHHHHHHHhhcCCCCcchHHHHHHHHhhhccc
Confidence 999999999999999974 5789999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCccchhhhhcCCCCCCccccccccccccccccc-ccccccCHHHHHHhhcCCCCCCcccCCC---CCccc
Q 013037 238 LTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEK-AFHEQLSVAEITNSAFEPSSMMAKCDPR---HGKYM 313 (451)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~s~~Pl~~~~~-~~~~~~~~~~l~~~~~~~~n~~~~~~~~---~~~~l 313 (451)
+|.++||||.+|.|+.++.++||||||+||+.++++|+++..+ ..++++++.+|++++|+++|+|++|+|+ .++|+
T Consensus 239 iT~~lr~pG~lN~Dl~d~~tnLvP~PrlhFl~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~~~~gkyl 318 (475)
T 3cb2_A 239 STTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYI 318 (475)
T ss_dssp HTTTTSSSSCTTCSHHHHHHHHCSSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSGGGBSSCCCCC--CCCCEE
T ss_pred cccccccCCcccchhhhhcceeecccceeEeecccccccccccccccccCCHHHHHHHHhccccceEecCcccccccchh
Confidence 9999999999999999999999999999999999999999877 7789999999999999999999999999 89999
Q ss_pred ceeccccCcCChhhHHHHHHhhhhcCccccccCCCCCCceeEeccCCccCCCCCcccccceeEeecCChhhHHHHHHHHH
Q 013037 314 ACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDH 393 (451)
Q Consensus 314 s~~~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~Nst~i~~~l~~l~~ 393 (451)
|+++++||++.++++.+++..++.|++..|++|+|+++|+++|.++|...++ .+.++|+|+|+|+|.+.|+++.+
T Consensus 319 a~~~~~RG~v~~~dv~~~i~~ik~k~~~~fv~W~p~~~k~~i~~~~p~~~~~-----~~~s~~~lsN~TaI~~~f~ri~~ 393 (475)
T 3cb2_A 319 AILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSA-----HRVSGLMMANHTSISSLFERTCR 393 (475)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTTCSCBCTTSCCCEEEEEECCCCC----------CCEEEEEEEEGGGHHHHHHHHH
T ss_pred hhHHhhcCCCCHHHHHHHHHHhhcccCCccceecCCCceeeeeccCCccCCC-----cceEEEEecCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999986543 25789999999999999999999
Q ss_pred HHHHHhhcccceecccccccCh---hhHHHHHHHHHHHHHHHHHHccCCCC
Q 013037 394 KFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEKDYEEVGAESAE 441 (451)
Q Consensus 394 ~~~~m~~~kAflH~Y~~~Gmee---~eF~Ea~~~l~~li~~Y~~~~~~~~~ 441 (451)
||++||+||||||||+++||+| +||.||+++|++|+++|++++.+...
T Consensus 394 kfd~m~~rrAflHwY~~eGm~e~~~~eF~EA~~~l~~li~eY~~~~~~~~~ 444 (475)
T 3cb2_A 394 QYDKLRKREAFLEQFRKEDMFKDNFDEMDTSREIVQQLIDEYHAATRPDYI 444 (475)
T ss_dssp HHHHHHHTTCSCHHHHTSGGGSSCCHHHHHHHHHHHHHHHHHHHTTSGGGS
T ss_pred HHHHHhhcccceeeecccCccccchhHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 9999999999999999999987 99999999999999999998644333
No 4
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=4.7e-108 Score=841.14 Aligned_cols=423 Identities=38% Similarity=0.715 Sum_probs=376.2
Q ss_pred CeeEEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeecccc
Q 013037 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (451)
Q Consensus 1 M~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~ 80 (451)
|||||+||+||||||||++||++++.||+++++|..++++. ..+.+++++||+|+..++|+||||+||+||++++.++.
T Consensus 1 MrEii~iq~GQ~GnqIg~~fW~~~~~ehgi~~~g~~~~~~~-~~~~~~~~~fF~e~~~~~yvPRav~vDle~~~l~~i~~ 79 (426)
T 2btq_B 1 VREILSIHVGQCGNQIADSFWRLALREHGLTEAGTLKEGSN-AAANSNMEVFFHKVRDGKYVPRAVLVDLEPGVIARIEG 79 (426)
T ss_dssp -CEEEEEEEHHHHHHHHHHHHHHHHHHHTBCTTSBBCC--------CCCTTTEEEEETTEEEECEEEEEECC--------
T ss_pred CCcEEEEecCCcHhHHHHHHHHHHHHHcCCCCCCCccCccc-ccccccccceeeecCCCceeeeeEEEecCccccccccc
Confidence 99999999999999999999999999999999998765431 12356799999999999999999999999999999999
Q ss_pred ccccccCCccceecccccccCCCcccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHhhhh
Q 013037 81 GTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~de 160 (451)
++++.+|+|++++.+++|+|||||+|||+.|+++.|+++|+||+++|+||.+|||+++||+|||||||+|+.|+|.|+|+
T Consensus 80 ~~~~~lf~p~~i~~g~~gAgnn~a~G~~~~G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~ 159 (426)
T 2btq_B 80 GDMSQLFDESSIVRKIPGAANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQA 159 (426)
T ss_dssp ----CCCCTTSEEECCSCCTTCHHHHHTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTT
T ss_pred cccccccCcccccccccCccCcccccccchhHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhhHhhhhccCCCCCCCcchhhHHHHHHHhhccc
Q 013037 161 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240 (451)
Q Consensus 161 y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 240 (451)
||++.+++++|+|.+..++.++++||+++++++|.+++|++|++||++|+++|.+.++ ..++|.++|++||+.|+++|.
T Consensus 160 y~~~~~lt~~V~p~p~~~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~-~~~~f~~~N~lia~~v~~it~ 238 (426)
T 2btq_B 160 YPKKRIFTFSVVPSPLISDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLN-RSPNYMDLNNIIALIVSSVTA 238 (426)
T ss_dssp CTTSEEEEEEEECCGGGCCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSS-SCCCHHHHHHHHHHHHHHHHH
T ss_pred cCcCceEEEEEecCCccccchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCC-CCcHHHHHHHHHHhhhcchhh
Confidence 9999999999999987679999999999999999999999999999999999999888 889999999999999999999
Q ss_pred ccccCCCCccchhhhhcCCCCCCcccccccccccccccccccccccCHHHHHHhhcCCCCCCcccCCCCCcccceecccc
Q 013037 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 320 (451)
Q Consensus 241 ~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~s~~Pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~R 320 (451)
++||||.+|.|+.++.++|+|||++||++++++|+++.....++..++.+|++++|+++|+|++|+|+.++|+++++++|
T Consensus 239 ~lr~~g~lN~D~~d~~t~lvP~P~~hf~~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~g~yla~~~i~r 318 (426)
T 2btq_B 239 SLRFPGKLNTDLSEFVTNLVPFPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDNFTAAIDWQQGVYLAASALFR 318 (426)
T ss_dssp HHHSSCSSSCSHHHHHHHHCSSTTCCEEEEECSCC-----------CCHHHHHHHTCGGGBSSCCCTTTCCEEEEEEEEE
T ss_pred hccCCCcccCCHHHHHHHHhhCCCCceeeccccccccchhhccccCCHHHHhhhhcCccceeEecCCCCchHHHHHHHHc
Confidence 99999999999999999999999999999999999998888889999999999999999999999999999999999999
Q ss_pred CcCChhhHHHHHHhhhhcCccccccCCC--CCCceeEeccCCccCCCCCcccccceeEeecCChhhHHHHHHHHHHHHHH
Q 013037 321 GDVVPKDVNAAVATIKTKRTIQFVDWCP--TGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLM 398 (451)
Q Consensus 321 G~~~~~~~~~~~~~~~~~~~~~f~~w~p--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~Nst~i~~~l~~l~~~~~~m 398 (451)
|++.++++++++..+ |++..|++|+| +++|+++|.++|... +.++|+|+|+|+|.+.|+++.++|++|
T Consensus 319 G~v~~~~v~~~~~~i--k~~~~fv~W~p~~~~~k~~i~~~~p~~~--------~~s~~~lsNstaI~~~~~~~~~~f~~m 388 (426)
T 2btq_B 319 GDVKAKDVDENMATI--RKSLNYASYMPASGGLKLGYAETAPEGF--------ASSGLALVNHTGIAAVFERLIAQFDIM 388 (426)
T ss_dssp CC----CTTTTHHHH--HTTSCBCTTSCSSCSEEEEEESCCCTTC--------SSBCCEEEEEGGGHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH--hcCCCCcccCCCCCceeeeeeccCCCCC--------cceeEEecCChHHHHHHHHHHHHHHHH
Confidence 999999999888777 67889999999 999999999998654 568999999999999999999999999
Q ss_pred hhcccceecccccccChhhHHHHHHHHHHHHHHHHHH
Q 013037 399 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 435 (451)
Q Consensus 399 ~~~kAflH~Y~~~Gmee~eF~Ea~~~l~~li~~Y~~~ 435 (451)
|+||||||||++|||||+||.||+++|++|+++|+++
T Consensus 389 ~~rrAflh~Y~~eGmee~eF~ea~~~l~~l~~eY~~~ 425 (426)
T 2btq_B 389 FDNHAYTHWYENAGVSRDMMAKARNQIATLAQSYRDA 425 (426)
T ss_dssp HHTTSSHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccchhhhccCCccHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999986
No 5
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=3.8e-107 Score=842.06 Aligned_cols=429 Identities=38% Similarity=0.744 Sum_probs=391.1
Q ss_pred CeeEEEEecCcchhHHHHHHHHHHHHhcCCCCC-CCCCCCCCCCCCCCccccccc---cCCCCccccceeeeCCCCceee
Q 013037 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQPD-GQMPGDTTVGGGDDAFNTFFS---ETGAGKHVPRAVFVDLEPTVID 76 (451)
Q Consensus 1 M~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~f~---e~~~~~~~pRailvD~e~~~i~ 76 (451)
|||||+||+||||||||++||+++++||+++++ |.++++.. ..+++++||+ |++.++|+||||+||+||++++
T Consensus 3 mrEii~iqvGQcGnqIG~~~We~~~~Ehgi~~~~g~~~~~~~---~~~~~~~fF~~~~e~~~~~~vpRav~vDlep~vi~ 79 (473)
T 2bto_A 3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVA---PRGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVID 79 (473)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTTCCCSSSCC---CSSSGGGTEEECSCC--CCEEECEEEEESSSHHHH
T ss_pred cccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCeecCCCc---ccccccceecccccccCCceeeeeeEecCcchhhh
Confidence 999999999999999999999999999999999 88765433 1567999999 9999999999999999999999
Q ss_pred ccccccccccCCccceecccccccCCCcccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHH
Q 013037 77 EVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER 156 (451)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~ 156 (451)
.++.++ +.+|+|++++++++|+|||||+|||+.|+++.|+++|.||+++|+||.+|||+|+||+|||||||+|+.|+|.
T Consensus 80 ~i~~~~-~~lf~p~~~it~~~GAgnn~a~G~~~~G~~~~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~ 158 (473)
T 2bto_A 80 NVKATS-GSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIES 158 (473)
T ss_dssp HHHHHS-TTCSCGGGEEECSSCCTTCHHHHHTSHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHH
T ss_pred hhhccc-cccccccceEecccCCCCCcCCCcchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHH
Confidence 999988 8899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhhHhhhhccCCCCCCCcchhhHHHHHHHh
Q 013037 157 LSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVIS 236 (451)
Q Consensus 157 l~dey~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~ 236 (451)
|+|+||++.+++++|+|++..++.++++||++|++++|.+++|++|++||++|+++|.+.+++..++|.++|++||+.|+
T Consensus 159 l~e~y~~~~ilt~~V~P~~~~~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l~i~~~~f~~~N~lia~~v~ 238 (473)
T 2bto_A 159 LKEKYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALA 238 (473)
T ss_dssp HHHHTCSSCEEEEEEECCCCSSCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHH
T ss_pred HHHHcCCCceEEEEEecCCccccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhccccccCcchHHHHHHHHhhhcc
Confidence 99999999999999999987789999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccCCCCccc--hhhhhcCCCCCCcccccccccccccccccccccccCHHHHHHhhcCCCCCCcccCCCCCcccc
Q 013037 237 SLTASLRFDGALNVD--VTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMA 314 (451)
Q Consensus 237 ~~t~~~r~~~~~~~~--l~~~~~~L~p~p~~~fl~~s~~Pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls 314 (451)
++|.++||||.+|.| +.++.++||||||+||+.++++|+++.....++..++.++++++|+++|+|++|+|+.++|++
T Consensus 239 ~it~~lr~~g~lN~D~~l~d~~t~LvP~Prlhf~~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~gkyla 318 (473)
T 2bto_A 239 GITASMRFSGFLTVEISLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLS 318 (473)
T ss_dssp HHHHHHHC------CCCHHHHHHHHCSSTTCCEEEEEEECCCCCC-----CCCHHHHHHHHTSGGGBSSSSCGGGSCEEE
T ss_pred cchhhcccCCcccCCccHHhhhhheeecCCcceeeeccccccccchhccccCCHHHHHhhhcccccceeecCCCCchHHH
Confidence 999999999999999 999999999999999999999999998888889999999999999999999999999999999
Q ss_pred eeccccCcCChhhH-HHHHHhhhhcCccccccCCCCCCceeEeccCCccCCCCCcccccceeEeecCChhhHHHHHHHHH
Q 013037 315 CCLMYRGDVVPKDV-NAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDH 393 (451)
Q Consensus 315 ~~~~~RG~~~~~~~-~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~Nst~i~~~l~~l~~ 393 (451)
+++++||++.++++ .+.+..++.+++..| |+|+++|+++|.++|... +.++++|+|+|+|.+.|+++.+
T Consensus 319 ~~~i~RG~v~~~dv~~~~i~~ik~k~~~~F--W~p~~~kv~i~~~pp~g~--------~~s~~~lsNsTaI~~~~~~l~~ 388 (473)
T 2bto_A 319 TAVLYRGIMEDKPLADAALAAMREKLPLTY--WIPTAFKIGYVEQPGISH--------RKSMVLLANNTEIARVLDRICH 388 (473)
T ss_dssp EEEEEEEC----CCHHHHHHHHHTTSCBCS--SSCCCEEEEEESSCCSSC--------SEEEEEEEEETTHHHHHHHHHH
T ss_pred HHHhhcCCCChHHhhHHHHHHHHhhcccce--ecCCcceecccccCCcCc--------ceeEEEecCCchHHHHHHHHHH
Confidence 99999999999999 988988998888999 999999999999998743 6799999999999999999999
Q ss_pred HHHHHhhcccceecccccccChhhHHHHHHHHHHHHHHHHHHccCCCCCC
Q 013037 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGE 443 (451)
Q Consensus 394 ~~~~m~~~kAflH~Y~~~Gmee~eF~Ea~~~l~~li~~Y~~~~~~~~~~~ 443 (451)
+|++||+||||||||+++||||+||.||+++|++|+++|+++..+..+++
T Consensus 389 kf~~m~~rrAflH~Y~~eGmee~eF~EA~e~l~~l~~eY~~~~~~~~~~~ 438 (473)
T 2bto_A 389 NFDKLWQRKAFANWYLNEGMSEEQINVLRASAQELVQSYQVAEESGAKAK 438 (473)
T ss_dssp HHHHHHTTTTTHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTC------
T ss_pred HHHHHhhhcchhHHhhccCCcHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 99999999999999999999999999999999999999999976654444
No 6
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=1.6e-42 Score=345.77 Aligned_cols=287 Identities=14% Similarity=0.218 Sum_probs=239.5
Q ss_pred CeeEEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeecccc
Q 013037 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (451)
Q Consensus 1 M~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~ 80 (451)
|++|++|++|||||+++.++|+. ++. + ++.+++|++.+.++....
T Consensus 21 ~~~I~vIGvGg~G~n~vn~m~~~-----gi~---------------------------g---v~~ia~nTD~q~L~~~~a 65 (353)
T 1w5f_A 21 NLKIKVIGVGGAGNNAINRMIEI-----GIH---------------------------G---VEFVAVNTDLQVLEASNA 65 (353)
T ss_dssp -CCEEEEEEHHHHHHHHHHHHHH-----CCT---------------------------T---EEEEEEESCHHHHHTCCC
T ss_pred CCEEEEECcCchHHHHHHHHHHh-----CCC---------------------------C---CCEEEEcCCHHHHhcCCC
Confidence 57899999999999999999984 321 1 477999998887655432
Q ss_pred ccccccCCccceecc-----cccccCCCcccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHH
Q 013037 81 GTYRQLFHPEQLISG-----KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~-----~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e 155 (451)
|+.+..+ ..|+||||+.| ++..++.+|.||+.+|.|| +|+++||+|||||||+++.|++
T Consensus 66 --------~~~i~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~I~~~le~~d---~~~i~as~GGGTGSG~ap~la~ 129 (353)
T 1w5f_A 66 --------DVKIQIGENITRGLGAGGRPEIG-----EQAALESEEKIREVLQDTH---MVFITAGFGGGTGTGASPVIAK 129 (353)
T ss_dssp --------SEEEECCTTTTTTSCCTTCHHHH-----HHHHHHTHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHH
T ss_pred --------CcEEEccCcccCCCCCCCChHHH-----HHHHHHHHHHHHHHHccCC---EEEEEeccCCCccccHHHHHHH
Confidence 3444443 35999999854 7899999999999999998 5999999999999999999999
Q ss_pred HhhhhcCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhhHhhhhccCCCCCCCcchhhHHHHHHH
Q 013037 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVI 235 (451)
Q Consensus 156 ~l~dey~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i 235 (451)
.+++ |+ +++++|+|.+...+..+++||+.+++++|.+++|.+|++||++|+++|.+.+.+. ++|..+|++|++.+
T Consensus 130 ~~ke-~g---~lt~~Vvt~Pf~~Eg~~~~~nA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~v 204 (353)
T 1w5f_A 130 IAKE-MG---ILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDVKIK-DAFLKADETLHQGV 204 (353)
T ss_dssp HHHH-TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHTTSCTTCCHH-HHHHHHHHHHHHHH
T ss_pred HHHH-hC---CcEEEEEeCCcccccchhHHHHHHHHHHHHhhCCEEEEEecHHHHhhhcccCCHH-HHHHHHHHHHHHHh
Confidence 9987 54 5555555444446788999999999999999999999999999999998888876 58999999999999
Q ss_pred hhcccccccCCCCcc--chhhhhcCCCCCCcccccccccccccccccccccccCHHHHHHhhcCCCCCCcccCCCCCccc
Q 013037 236 SSLTASLRFDGALNV--DVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYM 313 (451)
Q Consensus 236 ~~~t~~~r~~~~~~~--~l~~~~~~L~p~p~~~fl~~s~~Pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~l 313 (451)
+++|.++||||.+|. |+.++.++|+| |+++|+..+.+.- ..+..+++++.| ++++..++++.++|+
T Consensus 205 ~~it~~ir~pG~iNv~~D~~dv~t~L~~-~g~a~~g~g~a~g---------~~~v~ea~~~a~--~~~ll~~d~~~ak~~ 272 (353)
T 1w5f_A 205 KGISELITKRGYIRLTSRFARIESVMKD-AGAAILGIGVGKG---------EHRAREAAKKAM--ESKLIEHPVENASSI 272 (353)
T ss_dssp HHHHHHHHCCCCCCHHHHHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHH--TCTTCCSCGGGCSEE
T ss_pred cCchhhccCCcccccccCHHHHHHhccC-CCeeEEEEeecCC---------cchHHHHHHHHH--hCCCcCCChhhccee
Confidence 999999999999999 99999999999 9999887765421 135788888888 466777999999999
Q ss_pred ceeccccCcCChhhHHHHHHhhhhcCccccccCCCCCCceeEeccCCc
Q 013037 314 ACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPT 361 (451)
Q Consensus 314 s~~~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~ 361 (451)
.+++..||++++.++++.+..++.+... |.+++.+.+..++.
T Consensus 273 l~~i~~~~dl~~~ev~~a~~~I~~~~~~------~~~i~~G~~~d~~~ 314 (353)
T 1w5f_A 273 VFNITAPSNIRMEEVHEAAMIIRQNSSE------DADVKFGLIFDDEV 314 (353)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHTTSCT------TSEEEEEEEECTTS
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhhCC------CCcEEEEEEeCCCC
Confidence 9999999999999999998888765321 56777888876654
No 7
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=100.00 E-value=1.9e-42 Score=345.85 Aligned_cols=283 Identities=18% Similarity=0.254 Sum_probs=237.8
Q ss_pred eEEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeecccccc
Q 013037 3 ECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGT 82 (451)
Q Consensus 3 Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~~~ 82 (451)
+|++|++|||||++++++|+. ++. + -..+++|++.+.++.+..
T Consensus 39 ~I~vIGvGg~G~n~v~~m~~~-----gi~---------------------------g---v~fia~NTD~q~L~~~~a-- 81 (364)
T 2vap_A 39 KITVVGCGGAGNNTITRLKME-----GIE---------------------------G---AKTVAINTDAQQLIRTKA-- 81 (364)
T ss_dssp CEEEEEEHHHHHHHHHHHHHH-----TCT---------------------------T---EEEEEEESBHHHHHTSCC--
T ss_pred eEEEEeeCchHHHHHHHHHHh-----CCC---------------------------C---CCEEEEcCcHHHHhcCCC--
Confidence 699999999999999999986 221 0 145788887776654432
Q ss_pred ccccCCccceec-----ccccccCCCcccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHh
Q 013037 83 YRQLFHPEQLIS-----GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157 (451)
Q Consensus 83 ~~~~~~~~~~~~-----~~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l 157 (451)
|+.+.. ...|+||||+.| +++.++.+|.||+++|.||.+ +++||+|||||||+++.|++.+
T Consensus 82 ------~~ki~iG~~~t~G~GAGnn~a~G-----~~~~ee~~d~Ir~~le~~D~l---~i~as~GGGTGSG~ap~lae~l 147 (364)
T 2vap_A 82 ------DKKILIGKKLTRGLGAGGNPKIG-----EEAAKESAEEIKAAIQDSDMV---FITCGLGGGTGTGSAPVVAEIS 147 (364)
T ss_dssp ------SEEEECCTTTTTTBCCTTCHHHH-----HHHHHHTHHHHHHHHTTCSEE---EEEEETTSSHHHHHHHHHHHHH
T ss_pred ------CcEEEeccccccCCCCCCChHHH-----HHHHHHHHHHHHHHHhcCCEE---EEeccCCCCCCCChHHHHHHHH
Confidence 333433 345999999987 789999999999999999977 9999999999999999999999
Q ss_pred hhhcCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhhHhhhhccCCCCCCCcchhhHHHHHHHhh
Q 013037 158 SVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISS 237 (451)
Q Consensus 158 ~dey~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~ 237 (451)
++ | .+++++|+|.+...+.++++||+++++++|.+++|.+|++||++|+++|. .+.+ .++|.++|++|++.+++
T Consensus 148 ke-~---~~lt~~Vv~~Pf~~eg~~~~ynA~~~l~~L~e~~D~~ividNeaL~~i~~-~l~i-~~af~~~N~li~~~v~~ 221 (364)
T 2vap_A 148 KK-I---GALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVP-NMPL-KLAFKVADEVLINAVKG 221 (364)
T ss_dssp HH-T---TCEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEGGGHHHHST-TCCH-HHHHHHHHHHHHHHHHH
T ss_pred HH-h---CCcEEEEeCCCccccchhHHHHHHHHHHHHHHhCCeEEEEcHHHHHHHHc-cCCh-hhhhhhHHHHHHHHHhh
Confidence 98 7 35555665554446789999999999999999999999999999999998 7777 78999999999999999
Q ss_pred cccccccCCCCccchhhhhcCCCCCCcccccccccccccccccccccccCHHHHHHhhcCCCCCCcccCCCCCcccceec
Q 013037 238 LTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCL 317 (451)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~s~~Pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~ 317 (451)
+|.++||||.+|.|+.++.++|+| |++||+..++++- .....+++++.+ +++++.++++.++|+.+++
T Consensus 222 it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~--~~~ll~~d~~~ak~~l~~i 289 (364)
T 2vap_A 222 LVELITKDGLINVDFADVKAVMNN-GGLAMIGIGESDS---------EKRAKEAVSMAL--NSPLLDVDIDGATGALIHV 289 (364)
T ss_dssp HHHHHHSCCSBCCCHHHHHHHHTT-CEEEEEEEEEECS---------TTHHHHHHHHHH--TCTTCCSCGGGCCEEEEEE
T ss_pred hhHHhhcCCceeccHHHHHHhccC-CCeeEEEEEecCC---------cchHHHHHHHHH--hCcCcCcChhhcceEEEEE
Confidence 999999999999999999999999 9999998876531 135778888888 4688889999999999999
Q ss_pred cccCcCChhhHHHHHHhhhhcCccccccCCC-CCCceeEeccCCc
Q 013037 318 MYRGDVVPKDVNAAVATIKTKRTIQFVDWCP-TGFKCGINYQPPT 361 (451)
Q Consensus 318 ~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p-~~~~~~~~~~~~~ 361 (451)
..||++++.++++.+..++.+.. | .+++.+.|..++.
T Consensus 290 ~~~~dl~~~ev~~a~~~I~~~~~-------~~a~ii~G~~~~~~~ 327 (364)
T 2vap_A 290 MGPEDLTLEEAREVVATVSSRLD-------PNATIIWGATIDENL 327 (364)
T ss_dssp EECTTCCHHHHHHHHHHHHHHSC-------TTCEEEEEEEECTTC
T ss_pred EeCCCCCHHHHHHHHHHHHHhcC-------CCCCEEEEEEecCCC
Confidence 99999999999999888876542 3 5677777776654
No 8
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=100.00 E-value=1.1e-42 Score=346.11 Aligned_cols=296 Identities=16% Similarity=0.254 Sum_probs=250.4
Q ss_pred eEEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeecccccc
Q 013037 3 ECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGT 82 (451)
Q Consensus 3 Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~~~ 82 (451)
.|..|++|++|+++..++|+. ++ ++ +|.|++|+|...++.+..
T Consensus 9 ~I~viGvGg~G~n~vn~m~~~-----~~---------------------------~g---v~~ia~NTD~q~L~~~~a-- 51 (338)
T 2r75_1 9 KIKVIGVGGGGSNAVNRMYED-----GI---------------------------EG---VELYAINTDVQHLSTLKV-- 51 (338)
T ss_dssp CEEEEEEHHHHHHHHHHHHHT-----TC---------------------------CS---CEEEEEESBHHHHHTCCC--
T ss_pred eEEEEeeCccHHHHHHHHHHh-----CC---------------------------CC---ceEEEEECCHHHHhcCCC--
Confidence 488999999999999999984 11 11 688999999998776533
Q ss_pred ccccCCccceecc-----cccccCCCcccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHh
Q 013037 83 YRQLFHPEQLISG-----KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157 (451)
Q Consensus 83 ~~~~~~~~~~~~~-----~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l 157 (451)
|+.+..+ ..|+||||+.| +++.++.+|.||+++|.||.+ +++||+|||||||+++. ++.|
T Consensus 52 ------~~ki~iG~~~t~g~GAGnn~a~G-----~~~~ee~~d~Ir~~~e~~D~l---~i~~s~GGGTGSG~~~~-ia~l 116 (338)
T 2r75_1 52 ------PNKIQIGEKVTRGLGAGAKPEVG-----EEAALEDIDKIKEILRDTDMV---FISAGLGGGTGTGAAPV-IAKT 116 (338)
T ss_dssp ------SEEEECCHHHHTTBCCTTCHHHH-----HHHHHHTHHHHHHHHSSCSEE---EEEEETTSSHHHHHHHH-HHHH
T ss_pred ------CcEEEecCcccCCCCCCCChHHH-----HHHHHHHHHHHHHHHccCCee---EEecccCCCcCCCchHH-HHHH
Confidence 3344433 47999999965 799999999999999999987 99999999999999999 6677
Q ss_pred hhhcCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhhHhhhhccCCCCCCCcchhhHHHHHHHhh
Q 013037 158 SVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISS 237 (451)
Q Consensus 158 ~dey~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~ 237 (451)
+++|| +++++|+|.+...+..+++||+++++++|.+++|.+|++||++|+++|.+.+.+. ++|.++|++|++.+++
T Consensus 117 ~~e~g---~lt~~Vv~~P~~~eg~~~~ynA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~N~~i~~~v~~ 192 (338)
T 2r75_1 117 AKEMG---ILTVAVATLPFRFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTIK-DAFKEVDSVLSKAVRG 192 (338)
T ss_dssp HHHTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHHTSCCCSSHH-HHHHHHHHHHHHHHHH
T ss_pred HHhcC---CCEEEEeCCCccccchhhHHHHHHHHHHHHhcCCeEEEeccHHHHhhhhccCChH-HHHHHHHHHHHHHHhh
Confidence 88886 6677777766667899999999999999999999999999999999999888887 7999999999999999
Q ss_pred cccccccCCCCccchhhhhcCCCCCCcccccccccccccccccccccccCHHHHHHhhcCCCCCCcccCCCCCcccceec
Q 013037 238 LTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCL 317 (451)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~s~~Pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~ 317 (451)
+|.++||||.+|.|+.++.++|+|+ +++|+..+++|- ...........++..+|+ .|++..+++ +++
T Consensus 193 it~~ir~pG~iNvD~~dv~t~L~~~-g~a~~g~g~a~g----~~r~~~a~~~ai~s~lle-~n~~~~a~~-------~l~ 259 (338)
T 2r75_1 193 ITSIVVTPAVINVDFADVRTTLEEG-GLSIIGMGEGRG----DEKADIAVEKAVTSPLLE-GNTIEGARR-------LLV 259 (338)
T ss_dssp HHHHHHSCCSBCCCHHHHHHHHTTC-EEEEEEEEEEES----TTHHHHHHHHHHHCBSSB-SSCGGGCSE-------EEE
T ss_pred hhhhhccCCceeCCHHHhhhheeCC-ccceeeeccCCc----cchHHHHHHHHHHhhhhc-ccchhhhhe-------EEE
Confidence 9999999999999999999999999 889999888872 222344455778888888 778877764 788
Q ss_pred cccC--cCChhhHHHHHHhhhhcCccccccCCCCCCceeEeccCCccCCCCCcccccceeEeecCC
Q 013037 318 MYRG--DVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNS 381 (451)
Q Consensus 318 ~~RG--~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~Ns 381 (451)
++|| ++++.++.+.+..++.+. + .|.++++++|..+|... +.++|+|+|.
T Consensus 260 ~i~G~~dl~~~ev~~a~~~I~~~~-----~-~~~~i~~G~~~~~~~~~--------~~~vtviatg 311 (338)
T 2r75_1 260 TIWTSEDIPYDIVDEVMERIHSKV-----H-PEAEIIFGAVLEPQEQD--------FIRVAIVATD 311 (338)
T ss_dssp EEEECTTSCTTHHHHHHHHHHHHS-----C-TTCEEEEEEEECTTCCS--------EEEEEEEEEC
T ss_pred EEEcCCCCCHHHHHHHHHHHHHhc-----C-CCCcEEEEEEeCCCCCC--------eEEEEEEECC
Confidence 8999 899999999988887654 2 68889999999887642 6788888886
No 9
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=1.5e-41 Score=335.78 Aligned_cols=295 Identities=14% Similarity=0.173 Sum_probs=240.6
Q ss_pred eEEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeecccccc
Q 013037 3 ECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGT 82 (451)
Q Consensus 3 Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~~~ 82 (451)
+|++|++|||||+++.++|+. ++. + ++.+++|++.+.++.+.
T Consensus 13 ~I~viGvGg~G~n~v~~m~~~-----gi~---------------------------g---v~~i~~ntD~q~L~~~~--- 54 (320)
T 1ofu_A 13 VIKVIGVGGGGGNAVNHMAKN-----NVE---------------------------G---VEFICANTDAQALKNIA--- 54 (320)
T ss_dssp CEEEEEEHHHHHHHHHHHHHT-----TCC---------------------------S---EEEEEEESBTGGGSSCS---
T ss_pred EEEEECcCchHHHHHHHHHHh-----CCC---------------------------C---CCEEEEcCCHHHHhcCC---
Confidence 699999999999999999983 221 1 47799999888776553
Q ss_pred ccccCCccceecc-----cccccCCCcccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHh
Q 013037 83 YRQLFHPEQLISG-----KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157 (451)
Q Consensus 83 ~~~~~~~~~~~~~-----~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l 157 (451)
.|+.+..+ ..|+||||+.| ++..++..|.||+.+|.|| +|+++||+|||||||+++.|++.
T Consensus 55 -----a~~~i~iG~~~t~g~GAG~n~~~G-----~~~~ee~~d~I~~~le~~d---~~~i~as~GGGTGSG~~~~la~~- 120 (320)
T 1ofu_A 55 -----ARTVLQLGPGVTKGLGAGANPEVG-----RQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAEV- 120 (320)
T ss_dssp -----CSEEEECCHHHHTTBCCCSCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHHH-
T ss_pred -----CCcEEEccCCccCCCCCCCCHHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHHH-
Confidence 24444444 45999999855 7889999999999999998 59999999999999999987664
Q ss_pred hhhcCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhhHhhhhccCCCCCCCcchhhHHHHHHHhh
Q 013037 158 SVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISS 237 (451)
Q Consensus 158 ~dey~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~ 237 (451)
..+| .+..+++.+.|+ ..+..+++||+.+++++|.+++|.+|++||++|+++|.+.+.+. ++|.++|++|++.+++
T Consensus 121 a~e~-g~lt~~vv~~P~--~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~n~~l~~~v~~ 196 (320)
T 1ofu_A 121 AKEM-GILTVAVVTRPF--PFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRG 196 (320)
T ss_dssp HHHT-TCEEEEEEEECC--GGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHH
T ss_pred HHhc-CCcEEEEEeCCc--cccchhHHHHHHHHHHHHHHhCCEEEEEecHHhhhhhhcCCCHH-HHHHHHHHHHHHHhcc
Confidence 4567 344444444554 45788999999999999999999999999999999999888876 5899999999999999
Q ss_pred cccccccCCCCccchhhhhcCCCCCCcccccccccccccccccccccccCHHHHHHhhcCCCCCCcc-cCCCCCccccee
Q 013037 238 LTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAK-CDPRHGKYMACC 316 (451)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~s~~Pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~-~~~~~~~~ls~~ 316 (451)
+|.++||||.+|.|+.++.++|+| |+++|+..++++- .....+++++.++ ++++. ++++.++|+.++
T Consensus 197 it~~ir~pG~iNvD~~dv~t~l~~-~g~~~~g~g~a~g---------~~~~~~a~~~a~~--~~ll~~~d~~~ak~~l~~ 264 (320)
T 1ofu_A 197 ISDIIKRPGMINVDFADVKTVMSE-MGMAMMGTGCASG---------PNRAREATEAAIR--NPLLEDVNLQGARGILVN 264 (320)
T ss_dssp HHHHHHSCSSSSCCHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCCGGGCSEEEEE
T ss_pred cHhhcccCCceeecHHHHHHhccC-CCeeEEEEEecCc---------ccHHHHHHHHHHh--ccccccCCccccceEEEE
Confidence 999999999999999999999999 9999988876531 1245788888887 46665 899999999999
Q ss_pred ccccCcCChhhHHHHHHhhhhcCccccccCCCCCCceeEeccCCccCCCCCcccccceeEeec
Q 013037 317 LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIS 379 (451)
Q Consensus 317 ~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 379 (451)
+..||++++.++++.+..++.+... +.+++.+.+..++... +..+|+++
T Consensus 265 i~~~~d~~~~ev~~a~~~i~~~~~~------~~~ii~G~~~~~~~~~--------~v~vtvia 313 (320)
T 1ofu_A 265 ITAGPDLSLGEYSDVGNIIEQFASE------HATVKVGTVIDADMRD--------ELHVTVVA 313 (320)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSCT------TSEEEEEEEECTTCCS--------EEEEEEEE
T ss_pred EEeCCCCCHHHHHHHHHHHHHhcCC------CCcEEEEEEcCCCCCC--------eEEEEEEE
Confidence 9999999999999998888765422 4667788887665421 45666665
No 10
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=100.00 E-value=1.2e-41 Score=341.62 Aligned_cols=286 Identities=15% Similarity=0.184 Sum_probs=234.8
Q ss_pred eeEEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeeccccc
Q 013037 2 RECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG 81 (451)
Q Consensus 2 ~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~~ 81 (451)
.+|++|++|||||+++.++|+. ++. + ++.+++|++...++.+.
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~~-----gi~---------------------------g---v~fia~NTD~q~L~~~~-- 54 (382)
T 1rq2_A 12 AVIKVVGIGGGGVNAVNRMIEQ-----GLK---------------------------G---VEFIAINTDAQALLMSD-- 54 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHHT-----TCC---------------------------S---EEEEEEESCHHHHHHCC--
T ss_pred CEEEEECcCchHHHHHHHHHHh-----CCC---------------------------C---CCEEEecCCHHHHhcCC--
Confidence 4799999999999999999983 221 1 47799999888766543
Q ss_pred cccccCCccceecc-----cccccCCCcccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHH
Q 013037 82 TYRQLFHPEQLISG-----KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER 156 (451)
Q Consensus 82 ~~~~~~~~~~~~~~-----~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~ 156 (451)
.|+.+..+ ..|+||||+.| ++..++.+|.||+.+|.|| +|+|+||+|||||||+++.|++
T Consensus 55 ------a~~~i~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~Ir~~le~~d---~~fi~as~GGGTGSG~ap~lae- 119 (382)
T 1rq2_A 55 ------ADVKLDVGRDSTRGLGAGADPEVG-----RKAAEDAKDEIEELLRGAD---MVFVTAGEGGGTGTGGAPVVAS- 119 (382)
T ss_dssp ------CSEEEECCTTTC-----CCCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-
T ss_pred ------CCcEEEecccccCCCCCCCChHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-
Confidence 33444444 35899998865 7899999999999999998 5999999999999999999998
Q ss_pred hhhhcCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhhHhhhhccCCCCCCCcchhhHHHHHHHh
Q 013037 157 LSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVIS 236 (451)
Q Consensus 157 l~dey~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~ 236 (451)
|+.+|+ +..+++.+.|+ ..+..+++||+++++++|.+++|.+|++||++|+++|.+.+.+. ++|..+|++|++.++
T Consensus 120 la~e~g-~ltvsVv~~Pf--~~Eg~~~~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~vs 195 (382)
T 1rq2_A 120 IARKLG-ALTVGVVTRPF--SFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQMGDAAVSLM-DAFRSADEVLLNGVQ 195 (382)
T ss_dssp HHHHHT-CEEEEEEEECC--GGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHTTSSCTTCCHH-HHHHHHHHHHHHHHH
T ss_pred HHHHcC-CcEEEEEecCc--ccccchHHHHHHHHHHHHHHhCCEEEEEechhHHHHhcCCCCHH-HHHHHHHHHHHHHHH
Confidence 777786 44455555565 46889999999999999999999999999999999998888876 689999999999999
Q ss_pred hcccccccCCCCccchhhhhcCCCCCCcccccccccccccccccccccccCHHHHHHhhcCCCCCCcccCCCCCccccee
Q 013037 237 SLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACC 316 (451)
Q Consensus 237 ~~t~~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~s~~Pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~ 316 (451)
++|.++||||.+|.|+.++.++|+| |+++|+..+++.- .....+++++.++ ++++.++++.++|+.+.
T Consensus 196 ~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~ 263 (382)
T 1rq2_A 196 GITDLITTPGLINVDFADVKGIMSG-AGTALMGIGSARG---------EGRSLKAAEIAIN--SPLLEASMEGAQGVLMS 263 (382)
T ss_dssp HHHHHHHSBCSSCCCHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCGGGCSEEEEE
T ss_pred HHHHHHccCCceeccHHHHHHhccC-CCeeEEEeeeccc---------ccHHHHHHHHHHh--CcCcCCChhchheEEEE
Confidence 9999999999999999999999999 8988887765421 1346788888884 78888999999999876
Q ss_pred ccccCcCChhhHHHHHHhhhhcCccccccCCCCCCceeEeccCCc
Q 013037 317 LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPT 361 (451)
Q Consensus 317 ~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~ 361 (451)
+..++++++.++++.+..++.+.. .+.+++++.|..++.
T Consensus 264 i~gg~dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~~ 302 (382)
T 1rq2_A 264 IAGGSDLGLFEINEAASLVQDAAH------PDANIIFGTVIDDSL 302 (382)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECGGG
T ss_pred EEeCCCCCHHHHHHHHHHHHHhhC------CCCCEEEEEEeCCCC
Confidence 666668999999999888876543 366788888876654
No 11
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=5.2e-41 Score=338.31 Aligned_cols=298 Identities=14% Similarity=0.186 Sum_probs=243.6
Q ss_pred eeEEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeeccccc
Q 013037 2 RECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG 81 (451)
Q Consensus 2 ~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~~ 81 (451)
.+|++|++|||||+++.++|+. ++. + .+.+++|++.+.++.+.
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~~-----gi~---------------------------g---v~fia~NTD~q~L~~~~-- 54 (394)
T 2vaw_A 12 AVIKVIGVGGGGGNAVNHMAKN-----NVE---------------------------G---VEFICANTDAQALKNIA-- 54 (394)
T ss_dssp CCEEEEEEHHHHHHHHHHHHTT-----TCC---------------------------S---EEEEEEESCTTTTSSCS--
T ss_pred CEEEEECcCchHHHHHHHHHHc-----CCC---------------------------C---CCEEEecCCHHHHhcCC--
Confidence 4799999999999999999973 321 1 47799999888766443
Q ss_pred cccccCCccceecc-----cccccCCCcccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHH
Q 013037 82 TYRQLFHPEQLISG-----KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER 156 (451)
Q Consensus 82 ~~~~~~~~~~~~~~-----~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~ 156 (451)
.|+.+..+ ..|+||||+.| ++..++.+|.||+.+|.|| +|+|+||+|||||||+++.|++.
T Consensus 55 ------a~~ki~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~I~~~le~~d---~~fI~asmGGGTGSG~ap~lae~ 120 (394)
T 2vaw_A 55 ------ARTVLQLGPGVTKGLGAGANPEVG-----RQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAEV 120 (394)
T ss_dssp ------SSCEEECCHHHHSSSCCCSCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHHH
T ss_pred ------CCcEEEccccccCCCCCCCCHHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHHH
Confidence 23444443 45999999855 7889999999999999998 59999999999999999999999
Q ss_pred hhhhcCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhhHhhhhccCCCCCCCcchhhHHHHHHHh
Q 013037 157 LSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVIS 236 (451)
Q Consensus 157 l~dey~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~ 236 (451)
++ +| . +++++|+|.+...+..+++||+++++++|.+++|.+|++||++|+++|.+.+.+. ++|.++|++|++.++
T Consensus 121 ~k-e~-g--~ltvsVv~~Pf~~Eg~~r~ynA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~v~ 195 (394)
T 2vaw_A 121 AK-EM-G--ILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVR 195 (394)
T ss_dssp HH-HH-T--CEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHH
T ss_pred HH-Hc-C--CcEEEEecCCcccccchhhHHHHHHHHHHHHhCCEEEEEecHHHHHHhhcCCChH-HHHHHHHHHHHHHHH
Confidence 99 56 3 4455555433345788999999999999999999999999999999999888876 589999999999999
Q ss_pred hcccccccCCCCccchhhhhcCCCCCCcccccccccccccccccccccccCHHHHHHhhcCCCCCCcccCCCCCccccee
Q 013037 237 SLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACC 316 (451)
Q Consensus 237 ~~t~~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~s~~Pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~ 316 (451)
++|.++||||.+|.|+.++.++|+| |+++++..+.+.- ..+..+++++.|+ ++++..|+++.++|+.++
T Consensus 196 ~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~rv~ea~~~A~~-spLl~~~d~~~ak~~lv~ 264 (394)
T 2vaw_A 196 GISDIIKRPGMINVDFADVKTVMSE-MGMAMMGTGCASG---------PNRAREATEAAIR-NPLLEDVNLQGARGILVN 264 (394)
T ss_dssp HHHHHHHSBCSSCCCHHHHHHHHTT-TCCBEEEEEEECS---------TTHHHHHHHHHHT-CGGGTTCCTTTCSEEEEE
T ss_pred HHHHHhcCCCcccccHHHHHHhccC-CCceeEEEEeccc---------cchHHHHHHHHHh-cCccCCCCccccceeEEE
Confidence 9999999999999999999999999 7888877665421 1368889999998 556666899999999999
Q ss_pred ccccCcCChhhHHHHHHhhhhcCccccccCCCCCCceeEeccCCccCCCCCcccccceeEeecC
Q 013037 317 LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISN 380 (451)
Q Consensus 317 ~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N 380 (451)
+..||++++.++.+.+..++.+... +.+++++.|..++... +.++|+|+-
T Consensus 265 i~~~~dl~~~ev~~a~~~I~~~~~~------~a~i~~G~~~d~~~~~--------~v~VtvIat 314 (394)
T 2vaw_A 265 ITAGPDLSLGEYSDVGNIIEQFASE------HATVKVGTVIDADMRD--------ELHVTVVAT 314 (394)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSCT------TSEEEEEEEECSSCCS--------CEEEEEEEE
T ss_pred EEeCCCCCHHHHHHHHHHHHHhcCC------CCCEEEEeecCCCCCC--------eEEEEEEEc
Confidence 9999999999999998888765421 5668888887765432 455666553
No 12
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=100.00 E-value=7.2e-41 Score=336.03 Aligned_cols=286 Identities=15% Similarity=0.184 Sum_probs=236.1
Q ss_pred eeEEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeeccccc
Q 013037 2 RECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG 81 (451)
Q Consensus 2 ~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~~ 81 (451)
.+|..|++|||||+++.++|+. ++. + ++.|++|++...++.+..
T Consensus 12 ~~I~vIGvGg~G~navn~m~~~-----gi~---------------------------g---v~fia~NTD~q~L~~~~a- 55 (382)
T 2vxy_A 12 ASIKVIGVGGGGNNAVNRMIEN-----EVQ---------------------------G---VEYIAVNTDAQALNLSKA- 55 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHHT-----TCC---------------------------S---CEEEEEESBHHHHHTCCC-
T ss_pred CEEEEEeeCchHHHHHHHHHHh-----CCC---------------------------C---CCEEEEeCCHHHHhcCCC-
Confidence 4699999999999999999983 211 1 577999998887765532
Q ss_pred cccccCCccceec-----ccccccCCCcccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHH
Q 013037 82 TYRQLFHPEQLIS-----GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER 156 (451)
Q Consensus 82 ~~~~~~~~~~~~~-----~~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~ 156 (451)
|+.+.. ...|+||||+.| +++.++.+|.||+++|.|| +|+|+||+|||||||+|+.|++.
T Consensus 56 -------~~ki~iG~~~t~G~GAGnn~a~G-----~e~aee~~d~Ir~~le~~D---~ffI~asmGGGTGSG~apvla~~ 120 (382)
T 2vxy_A 56 -------EVKMQIGAKLTRGLGAGANPEVG-----KKAAEESKEQIEEALKGAD---MVFVTAGMGGGTGTGAAPVIAQI 120 (382)
T ss_dssp -------SEEEECCHHHHTTBCCTTCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEESSSSHHHHHHHHHHHH
T ss_pred -------CcEEEecccccCCCCCCCChHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeccCCCCCCcHHHHHHHH
Confidence 233333 345999999854 7899999999999999998 59999999999999999999998
Q ss_pred hhhhcCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhhHhhhhccCCCCCCCcchhhHHHHHHHh
Q 013037 157 LSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVIS 236 (451)
Q Consensus 157 l~dey~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~ 236 (451)
+++ |+ +++++|.|.+...|..+++||+++++++|.+++|.+|++||++|+++|.+.+.+. ++|.++|++|++.++
T Consensus 121 ake-~g---~ltvsVvt~Pf~~Eg~~r~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~vs 195 (382)
T 2vxy_A 121 AKD-LG---ALTVGVVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPML-EAFREADNVLRQGVQ 195 (382)
T ss_dssp HHH-TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHSCTTCCHH-HHHHHHHHHHHHHHH
T ss_pred HHH-hC---CCeEEEEeCCcccccchhHHHHHHHHHHHHHhCCEEEEEccHHHHHHHHhcCCHH-HHHHHHHHHHHHHHH
Confidence 876 74 4444554444446889999999999999999999999999999999999888876 589999999999999
Q ss_pred hcccccccCCCCccchhhhhcCCCCCCcccccccccccccccccccccccCHHHHHHhhcCCCCCCcccCCCCCccccee
Q 013037 237 SLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACC 316 (451)
Q Consensus 237 ~~t~~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~s~~Pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~ 316 (451)
++|.++||||.+|.|+.++.++|+| |+++|+..+++.- .....+++++.++ ++++.|+++.++|+.++
T Consensus 196 gIt~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~ 263 (382)
T 2vxy_A 196 GISDLIATPGLINLDFADVKTIMSN-KGSALMGIGIATG---------ENRAAEAAKKAIS--SPLLEAAIDGAQGVLMN 263 (382)
T ss_dssp HHHTTTSSCCTTCCCHHHHHHHTTC-SSEEEEEEEEEES---------TTHHHHHHHHHHT--CTTSCSCGGGCSEEEEE
T ss_pred HHHHHHcCCCccccCHHHHHHhccC-CCceEEEEEeccc---------ccHHHHHHHHHHh--CcCcCCChhhcceeEEE
Confidence 9999999999999999999999999 9999988776531 1346788888885 47778999999999776
Q ss_pred ccccCcCChhhHHHHHHhhhhcCccccccCCCCCCceeEeccCCc
Q 013037 317 LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPT 361 (451)
Q Consensus 317 ~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~ 361 (451)
+..++++++.++++.+..++.+.. .+.+++.+.|..++.
T Consensus 264 i~gg~dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~~ 302 (382)
T 2vxy_A 264 ITGGTNLSLYEVQEAADIVASASD------QDVNMIFGSVINENL 302 (382)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECTTC
T ss_pred EEeCCCCCHHHHHHHHHHHHHhcC------CCCCEEEEeecCCCC
Confidence 666668999999999888876543 256677788876654
No 13
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=100.00 E-value=7.5e-37 Score=305.78 Aligned_cols=278 Identities=13% Similarity=0.098 Sum_probs=218.6
Q ss_pred EEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeeccccccc
Q 013037 4 CISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTY 83 (451)
Q Consensus 4 ii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~~~~ 83 (451)
|..|.+||+|+.+.+++.+. + -..++|.||+|+||+++.+++.++..+.
T Consensus 45 i~VIGvGg~G~n~v~~m~~~-----~--------------------------~~~g~~~~~~iavNtd~~dl~~L~~~~~ 93 (427)
T 3m89_A 45 WGVIGAGQKGNKEADLFAGY-----K--------------------------FSNGTTCYPTLAVNFAESDMMHLQNIIK 93 (427)
T ss_dssp EEEEEEHHHHHHHHHHHTTC-----B--------------------------CTTSCBSCCEEEEESSGGGGTTCSSSCG
T ss_pred EEEEEECCcHHHHHHHHHHh-----C--------------------------cccCCcCceEEEEECCHHHHHHHhcCCC
Confidence 67899999999999887432 1 0135788999999999999988876653
Q ss_pred cccCCccce-ecccccccCCCcccccccc-----hhh--HHHHHHHHHHHHh---hcCCCCceeEEeeCCCCcccCchHH
Q 013037 84 RQLFHPEQL-ISGKEDAANNFARGHYTIG-----KEI--VDLCLDRIRKLAD---NCTGLQGFLVFNAVGGGTGSGLGSL 152 (451)
Q Consensus 84 ~~~~~~~~~-~~~~~g~gnn~a~G~~~~g-----~~~--~~~~~d~ir~~~E---~cD~lqgf~i~~sl~GGtGSG~~s~ 152 (451)
++.+ +.++.|+|+||+.|++..| ++. .|++++.||+.+| .||.+|+|++++|+|||||||+|+.
T Consensus 94 -----~~~i~l~G~~GAG~np~~G~~~ag~~~~~~e~~~~d~I~~~I~~~~e~~~~cd~~d~f~I~aglGGGTGSG~gp~ 168 (427)
T 3m89_A 94 -----EDRIHFDGLKGAARTPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSL 168 (427)
T ss_dssp -----GGEEEC-----------CHHHHHSSSSSTTHHHHHHHHHHHHHHHSBCTTSCBCCSEEEEEEETTSHHHHHHHHH
T ss_pred -----cceEEecCCCCCCCCHHHHHHHhhcccCcccchHHHHHHHHHHHHhhccccCCCCCEEEEeeecCCCccccHHHH
Confidence 3444 4577899999999998884 544 9999999999999 8899999999999999999999999
Q ss_pred HHHHhhhhcCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhc---------------cCCeeeeecchhhHhhhhccC
Q 013037 153 LLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE---------------HTDVAVLLDNEAIYDICRRSL 217 (451)
Q Consensus 153 l~e~l~dey~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e---------------~~d~~i~~dN~~l~~~~~~~~ 217 (451)
|++.|+++|+++++++++++|+... .++||++++++.|.+ ++|.+|++||++|..++.+..
T Consensus 169 la~~lke~~~~~~~~~vvt~P~~~e----~~~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe~l~~i~~~~~ 244 (427)
T 3m89_A 169 VLQLIREQFFPCPVSMLISLPSGDP----DEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQRIIESQK 244 (427)
T ss_dssp HHHHHHTTCSSSCEEEEEEECCSCH----HHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHHHHHHHHHHSS
T ss_pred HHHHHHHhcCCCcEEEEEEECCCCc----cHHHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehHHHHHHHhhcc
Confidence 9999999999999999999998642 345999999999744 999999999999877765433
Q ss_pred C--CC---CCCcc-hhhHHHHHHHhhccccc-c-cCCCCccchhhhhcCCCCCCcccccccccccccccccccccccCHH
Q 013037 218 D--IE---RPTYT-NLNRLVSQVISSLTASL-R-FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVA 289 (451)
Q Consensus 218 ~--~~---~~~~~-~~N~~ia~~i~~~t~~~-r-~~~~~~~~l~~~~~~L~p~p~~~fl~~s~~Pl~~~~~~~~~~~~~~ 289 (451)
. .. .++|. .+|++|++.|.+++... | +||.+|.|+.++.++|.|.|. |++.++++..... ..++.
T Consensus 245 ~~~~~~~~~~af~~~aN~~Ia~~I~~I~~~i~~~~~G~iNvD~aDv~t~L~~~~G--~a~iG~a~~~~~d-----~~~~~ 317 (427)
T 3m89_A 245 GTKDLKNRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGR--FLTIGKARIAKFD-----LHSLE 317 (427)
T ss_dssp CSSSCCCSCSCHHHHHHHHHHHHHHHHHHHHHHCCCSSSCCCHHHHHHHHHSSCS--EEEEEEEEECSCS-----HHHHH
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCCcEeecHHHHHHhCCCCCC--eEEEEEecccccc-----hhhHH
Confidence 2 12 23999 79999999999998865 4 799999999999999999997 6677777765422 12467
Q ss_pred HHHHhhcCCCCCCcccCCCCCcccceeccccCcCChhhH
Q 013037 290 EITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDV 328 (451)
Q Consensus 290 ~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~RG~~~~~~~ 328 (451)
+.+++.|++.+.+..+++..++++...++..-+....+.
T Consensus 318 ~ai~~al~~~~Ll~~~d~~~Ak~~lv~i~g~~~~~~~~~ 356 (427)
T 3m89_A 318 NSIKRSLDEGFFSAEHQFETATMYGGFVLRPSNADFFKD 356 (427)
T ss_dssp HHHHHHHHSSTTCSCCCGGGCCEEEEEEEEESSCGGGGC
T ss_pred HHHHHHHhCCCcccccCcccccEEEEEEEeCchhhhhhh
Confidence 788899988888889999999999888876554443333
No 14
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=99.96 E-value=3.9e-30 Score=252.96 Aligned_cols=195 Identities=16% Similarity=0.213 Sum_probs=160.5
Q ss_pred EEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeeccccccc
Q 013037 4 CISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTY 83 (451)
Q Consensus 4 ii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~~~~ 83 (451)
|..|.+|++|+.+..++.+. + . + -..|+++++...+..+..-+
T Consensus 7 I~VIGvGGaG~Nav~~m~~~-----~-------------------------~---~---v~~iaiNTD~q~L~~~~~~~- 49 (360)
T 3v3t_A 7 IVFAPIGQGGGNIVDTLLGI-----C-------------------------G---D---YNALFINTSKKDLDSLKHAK- 49 (360)
T ss_dssp EEEEEBSHHHHHHHHHHHHH-----C-------------------------T---T---SEECEEESCHHHHHTCSSCS-
T ss_pred EEEEEeCCcHHHHHHHHHHc-----C-------------------------C---C---ceEEEEECCHHHHhhCCCCc-
Confidence 77899999999999998765 0 0 0 25588888887765543211
Q ss_pred cccCCccceecccccccCCCcccccccchhhHHHHH-HHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHhhhhcC
Q 013037 84 RQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL-DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYG 162 (451)
Q Consensus 84 ~~~~~~~~~~~~~~g~gnn~a~G~~~~g~~~~~~~~-d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~dey~ 162 (451)
.+-.+....|+|+||+.| ++..++.. |.||+.+|+|+.+|||+++||+|||||||+++.|++.|+++||
T Consensus 50 -----~ki~ig~GlGAG~np~vG-----~eaaee~~~d~Ir~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~ 119 (360)
T 3v3t_A 50 -----HTYHIPYAEGCGKERKKA-----VGYAQTYYKQIIAQIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYP 119 (360)
T ss_dssp -----CEEECC------CCHHHH-----HHHHGGGHHHHHHHHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCT
T ss_pred -----cEEEcCCCCCCCCCHHHH-----HHHHHHhHHHHHHHHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCC
Confidence 111223346899998776 67778888 9999999999999999999999999999999999999999999
Q ss_pred CcceeEEEEecCCCCCCccchhhHHHHHHHHhhc---cCCee--eeecchhhHhhhhccCCCCCCCcchhhHHHHHHHhh
Q 013037 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE---HTDVA--VLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISS 237 (451)
Q Consensus 163 ~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e---~~d~~--i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~ 237 (451)
++++..++|+|+.. +.++++||+++++++|.+ ++|.+ |++||++ .++|.++|++|++++++
T Consensus 120 ~k~v~~vtV~Pf~~--Egvv~pyNA~l~l~~L~e~sD~vD~lcvividNea------------~~ay~~lN~lIaq~vs~ 185 (360)
T 3v3t_A 120 NKHFGFVGVLPKAT--EDIDEHMNAIACWNDIMRSTNEGKDISIYLLDNNK------------REKESDINKEFATLFND 185 (360)
T ss_dssp TSEEEEEEEECCTT--SCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEGGG------------SSSHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCc--cchhhHHHHHHHHHHHHhhhccCCceEEEEEeCCC------------chhHHHHHHHHHHHHHH
Confidence 99999999999975 579999999999999999 55555 9999998 56899999999999999
Q ss_pred cccccccCCCCccchhhhhcCC
Q 013037 238 LTASLRFDGALNVDVTEFQTNL 259 (451)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L 259 (451)
++..+|++|.+|.|+.++.+-+
T Consensus 186 lt~~l~~~G~iNVDfaDv~tvm 207 (360)
T 3v3t_A 186 FMNMSESHAEGVVDEDEISKLL 207 (360)
T ss_dssp HHGGGSCCSSCCCCHHHHHHHH
T ss_pred HHHhhccCCceeeeHHHHHHHH
Confidence 9999999999999999996544
No 15
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=99.96 E-value=5.5e-30 Score=254.47 Aligned_cols=267 Identities=14% Similarity=0.217 Sum_probs=203.3
Q ss_pred eEEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeecccccc
Q 013037 3 ECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGT 82 (451)
Q Consensus 3 Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~~~ 82 (451)
-|..|.+|++|+.+-.+..+. ++. + ...|+++++...+..+..
T Consensus 19 ~IkVIGVGG~G~NaVn~m~~~-----~~~---------------------------g---vefiaiNTD~qaL~~s~a-- 61 (396)
T 4dxd_A 19 TLKVIGVGGGGNNAVNRMIDH-----GMN---------------------------N---VEFIAINTDGQALNLSKA-- 61 (396)
T ss_dssp CEEEEEEHHHHHHHHHHHHHH-----CCC---------------------------S---EEEEEEESCHHHHHTCCC--
T ss_pred eEEEEEECCcHHHHHHHHHHh-----CCC---------------------------C---ceEEEEECCHHHHhcCCC--
Confidence 377899999999998887654 110 1 245889988776543322
Q ss_pred ccccCCccceecc-----cccccCCCcccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHh
Q 013037 83 YRQLFHPEQLISG-----KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157 (451)
Q Consensus 83 ~~~~~~~~~~~~~-----~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l 157 (451)
+..+..+ ..|+|+||+.| ++..++..|.||+.+|.|| +|+|+||+|||||||+++.|++ +
T Consensus 62 ------~~ki~lG~~~t~GlGAG~np~vG-----~eaaee~~d~Ir~~le~~D---~ffItagmGGGTGSGaapvIae-i 126 (396)
T 4dxd_A 62 ------ESKIQIGEKLTRGLGAGANPEIG-----KKAAEESREQIEDAIQGAD---MVFVTSGMGGGTGTGAAPVVAK-I 126 (396)
T ss_dssp ------SEEEECCHHHHTTSCCTTCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-H
T ss_pred ------ccEEEcCccccCCCCCCCChHHH-----HHHHHHHHHHHHHHHcCCC---EEEEEeccCCCccccHHHHHHH-H
Confidence 2233333 34899998754 7889999999999999999 5999999999999999998876 4
Q ss_pred hhhcCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhhHhhhhccCCCCCCCcchhhHHHHHHHhh
Q 013037 158 SVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISS 237 (451)
Q Consensus 158 ~dey~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~ 237 (451)
..+|+ +++++|+|.+...+..+++||+++++++|.+++|++|++||++|+++|.+.+.+.. +|..+|++|++.+++
T Consensus 127 ake~g---~LtvsVVt~Pf~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdNeaL~~I~~~~l~i~~-af~~aN~ll~q~Vsg 202 (396)
T 4dxd_A 127 AKEMG---ALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMME-AFKEADNVLRQGVQG 202 (396)
T ss_dssp HHHTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHSSEEEEEEGGGGGGTCCTTCCHHH-HHHHHHHHHHHHHHH
T ss_pred HHhcC---CceEEEEeCCccccchHHHHHHHHHHHHHHhhCCEEEEEcCHHHHHhhcccccHHH-HHHHHHHHHHHHHHh
Confidence 46675 56777765555568889999999999999999999999999999999988888765 999999999999999
Q ss_pred cccccccCCCCccchhhhhcCCCCCCcccccccccccccccccccccccCHHHHHHhhcCCCCCCcccCCCCCcccceec
Q 013037 238 LTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCL 317 (451)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~s~~Pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~ 317 (451)
+|.++||||.+|.|+.++.++|.+. ...++....++-.. ...+..+..+ .++++..+....+.+-..+
T Consensus 203 IT~~irfpG~iNvDfaDv~t~m~~~-G~A~mG~G~a~G~~---------ra~~A~~~Ai--~sPLL~~~i~gAkgvLvnI 270 (396)
T 4dxd_A 203 ISDLIAVSGEVNLDFADVKTIMSNQ-GSALMGIGVSSGEN---------RAVEAAKKAI--SSPLLETSIVGAQGVLMNI 270 (396)
T ss_dssp HHHHHHSCCTBCCCHHHHHHHHTTC-EECEEEEEEEESTT---------HHHHHHHHHH--CCSSCSSCSTTCCEEEEEE
T ss_pred hhhhhccCCcccCCHHHHHHHhhcC-CeEEEEEEeccCCc---------hHHHHHHHHH--hCccccCChhhhcceEEEE
Confidence 9999999999999999999999987 45666666654321 1233333333 3344455555555555555
Q ss_pred cccCcCChhhHHHHHHhhhh
Q 013037 318 MYRGDVVPKDVNAAVATIKT 337 (451)
Q Consensus 318 ~~RG~~~~~~~~~~~~~~~~ 337 (451)
....++...++.+....++.
T Consensus 271 tgg~dl~l~Ev~~~~~~i~~ 290 (396)
T 4dxd_A 271 TGGESLSLFEAQEAADIVQD 290 (396)
T ss_dssp EECTTCCHHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHHHHH
Confidence 55567888888887666654
No 16
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=99.75 E-value=1.1e-18 Score=176.35 Aligned_cols=222 Identities=14% Similarity=0.128 Sum_probs=154.1
Q ss_pred EEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeeccccccc
Q 013037 4 CISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTY 83 (451)
Q Consensus 4 ii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~~~~ 83 (451)
|..|.+||||+.|-+.|.+. .. ..+...+..++|+|+++...+..+...
T Consensus 18 i~vIGvGgaG~~ivd~~~~~-----~~------------------------~~~~~~~~~~~iaiNTd~~~L~~~~~~-- 66 (389)
T 4ei7_A 18 FGFLGLGMGGCAIAAECANK-----ET------------------------QIKNNKYPYRAILVNTNSQDFNKIEIK-- 66 (389)
T ss_dssp EEEEEEHHHHHHHHHHHHTC-----CC------------------------CCTTCSCCCEEEEEECCCHHHHHSCCC--
T ss_pred EEEEEECCchHHHHHHHHhc-----cc------------------------ccccccccccEEEEECCHHHHhhccCc--
Confidence 67899999999999988643 10 001123445899999999877655321
Q ss_pred cccCCccceeccc--ccccCCCcccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHhhhhc
Q 013037 84 RQLFHPEQLISGK--EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDY 161 (451)
Q Consensus 84 ~~~~~~~~~~~~~--~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~dey 161 (451)
........++.. .|+|.||..|+ ...++..+++.+.|+..++.+| -+++++++|||||+|.++.+++.+++.
T Consensus 67 -~~~~~g~~~~~g~g~GaG~~p~~G~-~aa~e~~~~i~~~l~~~~~~~d---~vfi~ag~GGGTGtGa~pvia~~~ke~- 140 (389)
T 4ei7_A 67 -NTGNVRKIQLEGYEQGAARNPQVGE-EAFVKHETKIFEAVKQEFEDRD---FIWITCGLGGGTGTGALLKAIEMLYEH- 140 (389)
T ss_dssp -SCSSEEEEECTTCCCTTCCCHHHHH-HHHHHTHHHHHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHHHHHHT-
T ss_pred -chhhhhhhccCCCCCCCCCChHHHH-HHHHHHHHHHHHHHHhhcCCcc---EEEEEecCCCCCccccHHHHHHHHHHc-
Confidence 222222333322 39999988874 3345566677777777666766 469999999999999999999999985
Q ss_pred CCcceeEEEEecCCCCC-CccchhhHHHHHHHHhhccCCeeeeecchhhHhhhhccCC--CCCCCcchhhHHHHHHHhhc
Q 013037 162 GKKSKLGFTVYPSPQVS-TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD--IERPTYTNLNRLVSQVISSL 238 (451)
Q Consensus 162 ~~~~i~~~~v~P~~~~~-~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~~~--~~~~~~~~~N~~ia~~i~~~ 238 (451)
..++..++++|+...+ ....++++.+..|.++.+.+|.+|++||+.|.++..+.-+ .-...|+..|.+|++.+..+
T Consensus 141 -~~~~~~vvt~Pf~~Eg~~~~~~A~~~i~~l~~~~~~vd~~ividN~~l~~~~~~~~~~~~~~~af~~an~~l~~~v~~i 219 (389)
T 4ei7_A 141 -DYNFGLLLTLPRDAEALKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSALANEYTSYSNKYIADALHEI 219 (389)
T ss_dssp -TCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTGGGSSEEEEEEHHHHHHHHHHHCTTCCGGGHHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEEEeCCCcCchHHHHHHHHHHHHHHHHhccCCeEEEeccHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4677788889986422 2233444445555555778999999999999998754321 12346899999999987766
Q ss_pred cccccc---CCCCccchhhhhcCCCCCC
Q 013037 239 TASLRF---DGALNVDVTEFQTNLVPYP 263 (451)
Q Consensus 239 t~~~r~---~~~~~~~l~~~~~~L~p~p 263 (451)
+..... +|..|.|+.++.+-|....
T Consensus 220 ~~~~~~~~~~g~in~D~aDv~~vm~~~G 247 (389)
T 4ei7_A 220 NLVTSSFTPFSDTHFDASEFAQVINTPG 247 (389)
T ss_dssp HHHTTSSEESSSCCCCHHHHHHHHTSSE
T ss_pred HHHHhCCCCCCeEEeeHHHHHHHhcCCC
Confidence 443333 4889999999888765433
No 17
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=99.24 E-value=5e-12 Score=119.93 Aligned_cols=174 Identities=16% Similarity=0.243 Sum_probs=118.4
Q ss_pred eEEEEecCcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCccccccccCCCCccccceeeeCCCCceeecccccc
Q 013037 3 ECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGT 82 (451)
Q Consensus 3 Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pRailvD~e~~~i~~~~~~~ 82 (451)
.|..+.+|++||.|.+.+++. + +.+|+||++.+-+...+ .
T Consensus 4 ki~VvGvGGAG~Nii~rL~~~--------------------------------G------a~~iAiNTD~q~L~~~k--~ 43 (315)
T 3r4v_A 4 KVCLIFAGGTGMNVATKLVDL--------------------------------G------EAVHCFDTCDKNVVDVH--R 43 (315)
T ss_dssp SCEEEEEHHHHHHHHGGGGGG--------------------------------G------GGEEEEESSSTTCCGGG--G
T ss_pred eEEEEEEcCcchHHHHHHHHc--------------------------------C------CCEEEEECchHHhhhhh--h
Confidence 567788999999998766543 1 46688888877653221 1
Q ss_pred ccccCCccceecccccccCCCcccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHhhhhcC
Q 013037 83 YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYG 162 (451)
Q Consensus 83 ~~~~~~~~~~~~~~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~dey~ 162 (451)
. ....+..+..|+|.+ ...|++..++..+.|++.++.+| -++++.++|||||+|.++.+++.+++.
T Consensus 44 ~----~~~~i~~gglGAGgd-----pe~g~e~a~e~~~eI~~~l~~aD---~VFVtaGLGGGTGTGaAPVvAeiake~-- 109 (315)
T 3r4v_A 44 S----VNVTLTKGTRGAGGN-----RKVILPLVRPQIPALMDTIPEAD---FYIVCYSLGGGSGSVLGPLITGQLADR-- 109 (315)
T ss_dssp G----SEEEECTTCCC---C-----HHHHHHHHGGGHHHHHHTSCCBS---CEEEEEESSSSSHHHHHHHHHHHHHHT--
T ss_pred h----cceeeecccCCCCCC-----hHHHHHHHHhhHHHHHHhcCCCC---EEEEEeccCCccccchHHHHHHHHHHc--
Confidence 1 011112344566666 45567777666777888777766 459999999999999999999999998
Q ss_pred CcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhhHhhhhccCCCCCCCcchhhHHHHHHHhhccc
Q 013037 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240 (451)
Q Consensus 163 ~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 240 (451)
...++++++.|... ........||+-+|..|.+.+|.+|+|+ +.+. .+...++.+|+.+|..|..+..
T Consensus 110 GalvVavVt~~~E~-~~~~~Nai~al~~LE~La~~~dt~Iv~d---~Len------~~~lp~~~lN~eia~rL~al~~ 177 (315)
T 3r4v_A 110 KASFVSFVVGAMES-TDNLGNDIDTMKTLEAIAVNKHLPIVVN---YVPN------TQGRSYESINDEIAEKIRKVVL 177 (315)
T ss_dssp TCCEEEEEEECCSS-HHHHHHHHHHHHHHHHHHHHHTSCEEEE---EEEC------CTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCc-chhhhchHHHHHHHHHHHhccCCcEEEe---cccc------CCCCchHHHHHHHHHHHHHHHH
Confidence 34677888887321 1112222346777999999999999998 3221 2455679999999998877644
No 18
>2e4h_B Tubulin alpha-ubiquitous chain; cytoskeleton, CAP-Gly, complex structure, solution structure, CLIP, structural protein; NMR {Homo sapiens}
Probab=97.65 E-value=3.9e-05 Score=49.87 Aligned_cols=35 Identities=77% Similarity=1.179 Sum_probs=27.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCC
Q 013037 416 GEFSEAREDLAALEKDYEEVGAESAEGEDGDEGDE 450 (451)
Q Consensus 416 ~eF~Ea~~~l~~li~~Y~~~~~~~~~~~~~~~~~~ 450 (451)
++|.||+++|.+|+.+|+++..+..+++.+++++|
T Consensus 1 ~EFsEA~edl~~L~~dYee~~~~~~e~~~~~~~~~ 35 (36)
T 2e4h_B 1 GEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEE 35 (36)
T ss_pred CcchHHHHHHHHHHHHHHHHhcccccccccccccc
Confidence 58999999999999999999877655444344444
No 19
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=66.31 E-value=4.4 Score=34.17 Aligned_cols=31 Identities=16% Similarity=0.201 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHHHhhcCCCCceeEEeeCCCCc
Q 013037 114 IVDLCLDRIRKLADNCTGLQGFLVFNAVGGGT 145 (451)
Q Consensus 114 ~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGt 145 (451)
-.+.+.++++..+++.|. +|++|+.++-|||
T Consensus 44 ~~~~~~~~i~~~i~~~~~-~gvliLtDl~GGS 74 (142)
T 3bed_A 44 GLSGTQAKLAAILKEAGN-VPTLVLADLXGGT 74 (142)
T ss_dssp HHHHHHHHHHHHHHHHCS-CCEEEEESSTTSH
T ss_pred CHHHHHHHHHHHHHhcCC-CCEEEEEECCCCH
Confidence 345678889999999999 9999999998886
No 20
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=65.77 E-value=9.8 Score=31.60 Aligned_cols=31 Identities=13% Similarity=0.256 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhhcCCCCceeEEeeCCCCc
Q 013037 115 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGT 145 (451)
Q Consensus 115 ~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGt 145 (451)
.+++.++++..+++.|.-+|++++.++-|||
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvliLtDl~GGS 71 (135)
T 1pdo_A 41 AETLIEKYNAQLAKLDTTKGVLFLVDTWGGS 71 (135)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEECCCCC
Confidence 4567888999999998888999999998886
No 21
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=56.40 E-value=8.2 Score=32.65 Aligned_cols=35 Identities=9% Similarity=0.231 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhhc-CCCCceeEEeeCCCCcccCc
Q 013037 115 VDLCLDRIRKLADNC-TGLQGFLVFNAVGGGTGSGL 149 (451)
Q Consensus 115 ~~~~~d~ir~~~E~c-D~lqgf~i~~sl~GGtGSG~ 149 (451)
.+++.++++..+++. |.-+|++|+.++.|||=.-.
T Consensus 43 ~~~~~~~i~~~i~~~~~~~~gvliLtDl~GGSp~n~ 78 (144)
T 3lfh_A 43 IEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSPFNI 78 (144)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEESSSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCCHHHH
Confidence 456778888888888 88889999999999874333
No 22
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=49.23 E-value=13 Score=31.47 Aligned_cols=39 Identities=18% Similarity=0.166 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHH
Q 013037 115 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153 (451)
Q Consensus 115 ~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l 153 (451)
.+.+.++++..+++.|.-+|++++.++-|||=.-.+..+
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvlvLtDl~GGSp~n~a~~~ 79 (150)
T 3ipr_A 41 VQALGGQIKTAIENVQQGDGVLVMVDLLSASPYNQAVLV 79 (150)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEEESSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHH
Confidence 456778888888888888999999999988743333333
No 23
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=47.75 E-value=23 Score=29.19 Aligned_cols=39 Identities=15% Similarity=0.407 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHH
Q 013037 114 IVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLL 154 (451)
Q Consensus 114 ~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~ 154 (451)
-.+++.++++..+++.|.-+|++++.++ ||=+-++..+.
T Consensus 43 ~~~~~~~~i~~~i~~~d~~~GVLiL~Dm--GSp~n~a~~l~ 81 (130)
T 3gx1_A 43 EVKAMYEKLKQTVVKLNPVKGVLILSDM--GSLTSFGNILT 81 (130)
T ss_dssp CHHHHHHHHHHHHHTSCCTTCEEEEECS--GGGGTHHHHHH
T ss_pred CHHHHHHHHHHHHHhhCCCCCEEEEEeC--CCHHHHHHHHH
Confidence 4567889999999999999999999999 55444444443
No 24
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=46.63 E-value=88 Score=27.21 Aligned_cols=111 Identities=11% Similarity=0.029 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHhh-cCCCCce-eEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEEEecCCCCCCccchhhHHHHHHHH
Q 013037 116 DLCLDRIRKLADN-CTGLQGF-LVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 193 (451)
Q Consensus 116 ~~~~d~ir~~~E~-cD~lqgf-~i~~sl~GGtGSG~~s~l~e~l~dey~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~ 193 (451)
..+...|++.+++ .+ +|+ -++.+.+.|+- -+++.++-.|+.+||+. --.+|+|+...+..- .+-|. .....
T Consensus 26 ~~ik~~L~~~l~~l~~--~G~~~~isgga~G~D-~~aae~vl~lk~~y~~i--~L~~v~Pf~~~~~~w-~~~~~-~~y~~ 98 (181)
T 2nx2_A 26 YYIKKAIKNRLIAFLD--EGLEWILISGQLGVE-LWAAEAAYDLQEEYPDL--KVAVITPFYEQEKNW-KEPNK-EQYEA 98 (181)
T ss_dssp HHHHHHHHHHHHHHHT--TTCCEEEECCCTTHH-HHHHHHHHTTTTTCTTC--EEEEEESSBCTTTTS-CHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHh--CCCcEEEECCCccHH-HHHHHHHHHhccccCCc--eEEEEecccchhhCC-CHHHH-HHHHH
Confidence 3444444444443 22 253 45555555654 35555566667788744 445677876544322 22233 45777
Q ss_pred hhccCCeeeeecchhhHhhhhccCCCCCCCcchhhHHHHHHHhhccccc
Q 013037 194 LLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASL 242 (451)
Q Consensus 194 l~e~~d~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~ 242 (451)
+.+.||-+..+...... .+..|..-|+.+..+-+.+.+-+
T Consensus 99 ll~~aD~v~~l~~~~y~---------~~~~~~~rn~~mvd~sD~liavy 138 (181)
T 2nx2_A 99 VLAQADYEASLTHRPYE---------SPLQFKQKNQFFIDKSDGLLLLY 138 (181)
T ss_dssp HHHHCSEEEESSSSBCC---------CHHHHHHHHHHHHHHSSEEEEEC
T ss_pred HHHhCCeEEecccCCCC---------CHHHHHHHHHHHHHHCCEEEEEE
Confidence 77788888876432210 01134566777777666665544
No 25
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=46.10 E-value=9.3 Score=32.97 Aligned_cols=31 Identities=10% Similarity=0.118 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhhcCCCCceeEEeeCCCCcc
Q 013037 116 DLCLDRIRKLADNCTGLQGFLVFNAVGGGTG 146 (451)
Q Consensus 116 ~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtG 146 (451)
+++.++++..+++.|.-+|++|+.++.|||=
T Consensus 61 ~~~~~~~~~~i~~~~~~~gVLiLtDl~GGSP 91 (159)
T 3mtq_A 61 VDLTQQVEALVARFPAQDELIVITDIFAGSV 91 (159)
T ss_dssp SCHHHHHHHHHHTSCTTSEEEEEESCTTSHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeCCCCCH
Confidence 3567888889999898899999999999883
No 26
>3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum}
Probab=45.11 E-value=15 Score=34.20 Aligned_cols=61 Identities=18% Similarity=0.181 Sum_probs=40.8
Q ss_pred cccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEE
Q 013037 106 GHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT 170 (451)
Q Consensus 106 G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~dey~~~~i~~~~ 170 (451)
|++..-..+.+.+.+.|++.+++.....=++.=||+|| +++..++-.|+..+|...+..+.
T Consensus 98 GF~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~~v~~~t 158 (258)
T 3g7n_A 98 GVHRPWSAVHDTIITEVKALIAKYPDYTLEAVGHSLGG----ALTSIAHVALAQNFPDKSLVSNA 158 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHH----HHHHHHHHHHHHHCTTSCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccCHHH----HHHHHHHHHHHHhCCCCceeEEE
Confidence 33333345667778888888887766665677789855 46677777788888876554433
No 27
>3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A*
Probab=42.43 E-value=10 Score=35.70 Aligned_cols=61 Identities=10% Similarity=0.144 Sum_probs=38.8
Q ss_pred cccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEE
Q 013037 106 GHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT 170 (451)
Q Consensus 106 G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~dey~~~~i~~~~ 170 (451)
|++..-..+.+.+.+.|++.+++.....=++.=||+|| +++..++-.|+..+|...+..+.
T Consensus 112 Gf~~~~~~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGG----alA~l~a~~l~~~~~~~~~~~~t 172 (279)
T 3uue_A 112 GFQQAYNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGA----AMGLLCAMDIELRMDGGLYKTYL 172 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHH----HHHHHHHHHHHHHSTTCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEEcccCHHH----HHHHHHHHHHHHhCCCCceEEEE
Confidence 33333345667777888888887666655667788854 46666666777777755443333
No 28
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=33.83 E-value=42 Score=27.96 Aligned_cols=39 Identities=18% Similarity=0.338 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHHhh--cCCCCceeEEeeCCCCcccCchHHHH
Q 013037 114 IVDLCLDRIRKLADN--CTGLQGFLVFNAVGGGTGSGLGSLLL 154 (451)
Q Consensus 114 ~~~~~~d~ir~~~E~--cD~lqgf~i~~sl~GGtGSG~~s~l~ 154 (451)
-.+++.++++..+++ .|.-+|++++.++ ||=+-++..+.
T Consensus 43 ~~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm--GSp~n~a~~l~ 83 (139)
T 3gdw_A 43 EVQTMYEQLRNQVITQKESLNNGILLLTDM--GSLNSFGNMLF 83 (139)
T ss_dssp CHHHHHHHHHHHHHTSTGGGTTCEEEEECS--GGGGGHHHHHH
T ss_pred CHHHHHHHHHHHHHhhcCCCCCCEEEEEeC--CCHHHHHHHHH
Confidence 456788899999988 7788999999999 44344444433
No 29
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=33.04 E-value=19 Score=29.94 Aligned_cols=27 Identities=19% Similarity=0.308 Sum_probs=21.6
Q ss_pred HHHHHHHHHhhcCCCCceeEEeeCCCCc
Q 013037 118 CLDRIRKLADNCTGLQGFLVFNAVGGGT 145 (451)
Q Consensus 118 ~~d~ir~~~E~cD~lqgf~i~~sl~GGt 145 (451)
..++|+..+++.|.=+|++++.++ |||
T Consensus 50 ~~~~i~~ai~~~~~~dgVlvltDL-Ggs 76 (135)
T 3b48_A 50 DPMKIIDTINEADSDREFLIFADL-GSA 76 (135)
T ss_dssp CHHHHHHHHHHSCSSCEEEEEECS-HHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEEeC-CCC
Confidence 446677778888877899999999 665
No 30
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=30.88 E-value=30 Score=28.63 Aligned_cols=26 Identities=19% Similarity=0.418 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhcCCCCceeEEeeCCCCc
Q 013037 118 CLDRIRKLADNCTGLQGFLVFNAVGGGT 145 (451)
Q Consensus 118 ~~d~ir~~~E~cD~lqgf~i~~sl~GGt 145 (451)
..++|+..+++.| =+|++++.++ |||
T Consensus 45 ~~~~i~~ai~~~~-~dgVlvltDL-Ggs 70 (131)
T 3ct6_A 45 SFDRVMNAIEENE-ADNLLTFFDL-GSA 70 (131)
T ss_dssp CHHHHHHHHHHSS-CSEEEEEESS-GGG
T ss_pred HHHHHHHHHHhCC-CCCEEEEEeC-CCC
Confidence 4466777777777 4899999999 654
No 31
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=27.10 E-value=38 Score=26.39 Aligned_cols=53 Identities=28% Similarity=0.585 Sum_probs=37.4
Q ss_pred ecCChhhHHHHHHHHH-------HHHHHhhcccceecccccccCh--hhHHHHHHHHHHHHHHHHHH
Q 013037 378 ISNSTSVAEVFSRIDH-------KFDLMYAKRAFVHWYVGEGMEE--GEFSEAREDLAALEKDYEEV 435 (451)
Q Consensus 378 l~Nst~i~~~l~~l~~-------~~~~m~~~kAflH~Y~~~Gmee--~eF~Ea~~~l~~li~~Y~~~ 435 (451)
|+|.++|...|..|.. .-..+-.+|.| | +|+.+ ....||+..|+.|-+++++=
T Consensus 30 i~nDssVQsLF~~lt~MH~~Ll~~i~~~ee~R~~---y--E~LQDkL~qi~eAR~ALdaLR~eH~~K 91 (98)
T 3f1i_H 30 ITNDSAVLSLFQSINGMHPQLLELLNQLDERRLY---Y--EGLQDKLAQIRDARGALSALREEHREK 91 (98)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788888888776544 44444445544 3 57744 58999999999999999753
No 32
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=25.84 E-value=90 Score=28.73 Aligned_cols=59 Identities=15% Similarity=0.272 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEEEecCC
Q 013037 116 DLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSP 175 (451)
Q Consensus 116 ~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~dey~~~~i~~~~v~P~~ 175 (451)
+-+.+.+...++.......=.-+-++|.||| .++..++..+...+|...+...+|=|+.
T Consensus 34 ~~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG-~~~~~~l~~l~~~~~~~~v~~~~vD~S~ 92 (292)
T 2aot_A 34 EFMDKKLPGIIGRIGDTKSEIKILSIGGGAG-EIDLQILSKVQAQYPGVCINNEVVEPSA 92 (292)
T ss_dssp HHHHHTHHHHSSSTTTTCSEEEEEEETCTTS-HHHHHHHHHHHHHSTTCEEEEEEECSCH
T ss_pred HHHHHhchhHHhhccCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhCCCceeeEEEEeCCH
Confidence 3333445555554432222235778888886 4666788888777776644446776653
No 33
>3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0
Probab=24.45 E-value=34 Score=32.48 Aligned_cols=52 Identities=12% Similarity=0.084 Sum_probs=33.0
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHhhhhcCCccee
Q 013037 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167 (451)
Q Consensus 112 ~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~dey~~~~i~ 167 (451)
+.+.+.+.+.|++.+++.....=++.=||+|| +++..++-.|+...++..++
T Consensus 134 ~~~~~~i~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~~~~ 185 (301)
T 3o0d_A 134 NNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGG----AAALLFGINLKVNGHDPLVV 185 (301)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSEEEEEEETHHH----HHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCceEEEeccChHH----HHHHHHHHHHHhcCCCceEE
Confidence 45566777788888877665555566788855 45666666676665444333
No 34
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=23.93 E-value=33 Score=32.39 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHH
Q 013037 115 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER 156 (451)
Q Consensus 115 ~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~ 156 (451)
.+++++++|..+++=..+ +++|.|+|++++..|.
T Consensus 13 r~~il~~l~~~i~~~~~i--------ig~gaGtGlsAk~~e~ 46 (286)
T 2p10_A 13 RSELVDRFQKKIRAGEPI--------IGGGAGTGLSAKSEEA 46 (286)
T ss_dssp HHHHHHHHHHHHHTTCCE--------EEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCce--------EEEecccchhhHHHHh
Confidence 567899999999875555 6778899999888754
No 35
>1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A*
Probab=20.66 E-value=43 Score=30.88 Aligned_cols=44 Identities=14% Similarity=0.172 Sum_probs=29.8
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHhhh
Q 013037 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 159 (451)
Q Consensus 112 ~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~d 159 (451)
..+.+.+.+.|++..++.....=++.=||+||+ ++..++-.|+.
T Consensus 105 ~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~ 148 (261)
T 1uwc_A 105 ISVQDQVESLVKQQASQYPDYALTVTGHSLGAS----MAALTAAQLSA 148 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHH----HHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHCCCceEEEEecCHHHH----HHHHHHHHHhc
Confidence 345677777888888776666667778898554 55666556653
No 36
>1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17
Probab=20.39 E-value=63 Score=30.06 Aligned_cols=53 Identities=13% Similarity=0.201 Sum_probs=34.2
Q ss_pred cccccccchhhHHHHHHHHHHHHhhcCCCCceeEEeeCCCCcccCchHHHHHHhhhh
Q 013037 104 ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160 (451)
Q Consensus 104 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~de 160 (451)
.+|++..-..+.+.+.+.|++..++.....=++.=|||||+ ++..++-.++..
T Consensus 109 h~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~~ 161 (279)
T 1tia_A 109 ELGFWSSWKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAA----VATLAATDLRGK 161 (279)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHH----HHHHHHHHHHhc
Confidence 44554444456677777888887776666667788899554 555555555543
Done!