BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013038
(451 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H0W2|HDA9_ARATH Histone deacetylase 9 OS=Arabidopsis thaliana GN=HDA9 PE=2 SV=1
Length = 426
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/446 (83%), Positives = 403/446 (90%), Gaps = 22/446 (4%)
Query: 1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHL+L+Y LH KME+YRPHKAYP+E+
Sbjct: 1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEM 60
Query: 61 AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
AQFHS DYVEFL RI P+ Q+LF E+ +YNLGEDCPVFE+LFEFCQ+YAGGTIDAARRL
Sbjct: 61 AQFHSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRL 120
Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
NN+LCDIAINWAGGLHHAKKC+ASGFCYINDLVLGILELLK+H RVLYIDIDVHHGDGVE
Sbjct: 121 NNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVE 180
Query: 181 EAFYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKF 240
EAFYFTDR VMTVSFHKFGD FFPGTGDVKEIGEREGKF
Sbjct: 181 EAFYFTDR----------------------VMTVSFHKFGDKFFPGTGDVKEIGEREGKF 218
Query: 241 YAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGH 300
YAINVPLKDGIDD+SF RLF+TIISKVVE Y PGAIVLQCGADSLA DRLGCFNLSIDGH
Sbjct: 219 YAINVPLKDGIDDSSFNRLFRTIISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGH 278
Query: 301 AECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPEC 360
AECV+FVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN+YIKYFAP+
Sbjct: 279 AECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDF 338
Query: 361 SLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPD 420
SL+IP GHIENLN+KSY+S+IK+Q+LENLR IQHAPSVQMQEVPPDFYIP+FDEDEQNPD
Sbjct: 339 SLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPD 398
Query: 421 ERMDQHTQDKQIQRDDEFYEGDNDND 446
R DQ ++DKQIQRDDE+++GDNDND
Sbjct: 399 VRADQRSRDKQIQRDDEYFDGDNDND 424
>sp|P56517|HDAC1_CHICK Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2 SV=1
Length = 480
Score = 534 bits (1375), Expect = e-151, Method: Compositional matrix adjust.
Identities = 252/445 (56%), Positives = 333/445 (74%), Gaps = 24/445 (5%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY TDR VMTVSFHK+G+ +FPGTGD+++IG +GK+YA
Sbjct: 187 FYTTDR----------------------VMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYA 223
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+N PL+DGIDD S+ +FK +ISKV+ET+ P A+VLQCG+DSL+GDRLGCFNL+I GHA+
Sbjct: 224 VNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAK 283
Query: 303 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 362
CV FVK FNLP+L+ GGGGYT NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L
Sbjct: 284 CVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKL 343
Query: 363 RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDE 421
I ++ N N+ YL IK ++ ENLR + HAP VQMQ +P D DE+E++P++
Sbjct: 344 HISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPEDAVQEDSGDEEEEDPEK 403
Query: 422 RMDQHTQDKQIQRDDEFYEGDNDND 446
R+ DK+I D+EF + +++ +
Sbjct: 404 RISIRNSDKRISCDEEFSDSEDEGE 428
>sp|Q4QQW4|HDAC1_RAT Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2 SV=1
Length = 482
Score = 526 bits (1354), Expect = e-148, Method: Compositional matrix adjust.
Identities = 238/404 (58%), Positives = 307/404 (75%), Gaps = 23/404 (5%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY TDR VMTVSFHK+G+ +FPGTGD+++IG +GK+YA
Sbjct: 187 FYTTDR----------------------VMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYA 223
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+N PL+DGIDD S+ +FK ++SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+
Sbjct: 224 VNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAK 283
Query: 303 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 362
CV FVK FNLP+L+ GGGGYT NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L
Sbjct: 284 CVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKL 343
Query: 363 RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 406
I ++ N N+ YL IK ++ ENLR + HAP VQMQ +P D
Sbjct: 344 HISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED 387
>sp|O42227|HDA1B_XENLA Probable histone deacetylase 1-B OS=Xenopus laevis GN=hdac1-b PE=1
SV=1
Length = 480
Score = 525 bits (1353), Expect = e-148, Method: Compositional matrix adjust.
Identities = 244/445 (54%), Positives = 333/445 (74%), Gaps = 24/445 (5%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DI++NW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RV+YIDID+HHGDGVEEA
Sbjct: 127 QQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY TDR VM+VSFHK+G+ +FPGTGD+++IG +GK+YA
Sbjct: 187 FYTTDR----------------------VMSVSFHKYGE-YFPGTGDLRDIGAGKGKYYA 223
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+N PL+DGIDD S+ +FK +++KV+E + P A+VLQCGADSL+GDRLGCFNL+I GHA+
Sbjct: 224 VNYPLRDGIDDESYEAIFKPVMTKVMEMFQPSAVVLQCGADSLSGDRLGCFNLTIKGHAK 283
Query: 303 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 362
CV F+K FNLP+L+ GGGGYT NVARCWT ET + LD+E+PNE+P N+Y +YF P+ L
Sbjct: 284 CVEFIKTFNLPMLMLGGGGYTIRNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKL 343
Query: 363 RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDE 421
I ++ N N+ YL IK ++ ENLR + HAP VQMQ +P D + +EDE++PD+
Sbjct: 344 HISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDSVHDDSGEEDEEDPDK 403
Query: 422 RMDQHTQDKQIQRDDEFYEGDNDND 446
R+ + DK+I D+EF + +++ +
Sbjct: 404 RISIRSSDKRIACDEEFSDSEDEGE 428
>sp|O09106|HDAC1_MOUSE Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1
Length = 482
Score = 525 bits (1353), Expect = e-148, Method: Compositional matrix adjust.
Identities = 238/404 (58%), Positives = 307/404 (75%), Gaps = 23/404 (5%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY TDR VMTVSFHK+G+ +FPGTGD+++IG +GK+YA
Sbjct: 187 FYTTDR----------------------VMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYA 223
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+N PL+DGIDD S+ +FK ++SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+
Sbjct: 224 VNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAK 283
Query: 303 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 362
CV FVK FNLP+L+ GGGGYT NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L
Sbjct: 284 CVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKL 343
Query: 363 RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 406
I ++ N N+ YL IK ++ ENLR + HAP VQMQ +P D
Sbjct: 344 HISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED 387
>sp|Q32PJ8|HDAC1_BOVIN Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1
Length = 482
Score = 525 bits (1353), Expect = e-148, Method: Compositional matrix adjust.
Identities = 238/404 (58%), Positives = 307/404 (75%), Gaps = 23/404 (5%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY TDR VMTVSFHK+G+ +FPGTGD+++IG +GK+YA
Sbjct: 187 FYTTDR----------------------VMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYA 223
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+N PL+DGIDD S+ +FK ++SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+
Sbjct: 224 VNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAK 283
Query: 303 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 362
CV FVK FNLP+L+ GGGGYT NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L
Sbjct: 284 CVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKL 343
Query: 363 RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 406
I ++ N N+ YL IK ++ ENLR + HAP VQMQ +P D
Sbjct: 344 HISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED 387
>sp|Q5RAG0|HDAC1_PONAB Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=2 SV=1
Length = 482
Score = 525 bits (1351), Expect = e-148, Method: Compositional matrix adjust.
Identities = 237/404 (58%), Positives = 307/404 (75%), Gaps = 23/404 (5%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
++ K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY TDR VMTVSFHK+G+ +FPGTGD+++IG +GK+YA
Sbjct: 187 FYTTDR----------------------VMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYA 223
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+N PL+DGIDD S+ +FK ++SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+
Sbjct: 224 VNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAK 283
Query: 303 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 362
CV FVK FNLP+L+ GGGGYT NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L
Sbjct: 284 CVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKL 343
Query: 363 RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 406
I ++ N N+ YL IK ++ ENLR + HAP VQMQ +P D
Sbjct: 344 HISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED 387
>sp|Q13547|HDAC1_HUMAN Histone deacetylase 1 OS=Homo sapiens GN=HDAC1 PE=1 SV=1
Length = 482
Score = 525 bits (1351), Expect = e-148, Method: Compositional matrix adjust.
Identities = 237/404 (58%), Positives = 307/404 (75%), Gaps = 23/404 (5%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
++ K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY TDR VMTVSFHK+G+ +FPGTGD+++IG +GK+YA
Sbjct: 187 FYTTDR----------------------VMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYA 223
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+N PL+DGIDD S+ +FK ++SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+
Sbjct: 224 VNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAK 283
Query: 303 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 362
CV FVK FNLP+L+ GGGGYT NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L
Sbjct: 284 CVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKL 343
Query: 363 RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 406
I ++ N N+ YL IK ++ ENLR + HAP VQMQ +P D
Sbjct: 344 HISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED 387
>sp|Q55FN5|HDA11_DICDI Type-1 histone deacetylase 1 OS=Dictyostelium discoideum GN=hdaA
PE=2 SV=1
Length = 495
Score = 523 bits (1347), Expect = e-147, Method: Compositional matrix adjust.
Identities = 247/443 (55%), Positives = 331/443 (74%), Gaps = 23/443 (5%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
S K+SYFYD +VG+ Y+GPNHPMKPHR+ MTH LVL+Y ++KKM+I+RP KA +EL
Sbjct: 2 STRKVSYFYDNEVGNHYYGPNHPMKPHRMRMTHDLVLNYGIYKKMQIFRPRKASELELTN 61
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
FHS DY+ FL +TPD H + ++L K+N+ EDCPVF+ ++ FCQI +GG+I A ++N+
Sbjct: 62 FHSDDYINFLKLVTPDNMHDYSKQLVKFNVREDCPVFDGMYNFCQISSGGSIGCAVKVNS 121
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
+ D+AINWAGGLHHAKK EASGFCY ND+VL ILELLK+H RVLYIDID+HHGDGVEEA
Sbjct: 122 KESDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHHERVLYIDIDIHHGDGVEEA 181
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY TDR VMTVSFHK+GD +FPGTGDVK+IG +GK+Y+
Sbjct: 182 FYTTDR----------------------VMTVSFHKYGD-YFPGTGDVKDIGADKGKYYS 218
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+N PLKDGIDD S+ +F+ II V++ Y PGA+V+QCGADSL GDRLGCFNL++ GHA+
Sbjct: 219 LNFPLKDGIDDESYQSIFRPIIRSVMDFYRPGAVVIQCGADSLTGDRLGCFNLTLRGHAQ 278
Query: 303 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 362
C+ F+K FN+PL+V GGGGYT +NVARCWT ET IL+D+EL +E+P N+Y++Y+ PE L
Sbjct: 279 CIEFLKSFNVPLVVLGGGGYTIKNVARCWTYETSILVDSELKDELPYNDYLEYYGPEYRL 338
Query: 363 RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDER 422
I ++EN N+K YL +K+Q+LENLR++ HAP+ ++PPD + DED+++PD R
Sbjct: 339 HITPNNMENQNTKDYLEKLKIQLLENLRNLNHAPAAAHHDIPPDSFNYSDDEDDEDPDVR 398
Query: 423 MDQHTQDKQIQRDDEFYEGDNDN 445
+ + +DK++ E + D ++
Sbjct: 399 ISEADRDKKVHHQGELSDSDEED 421
>sp|P56518|HDAC1_STRPU Histone deacetylase 1 OS=Strongylocentrotus purpuratus GN=HDAC1
PE=2 SV=1
Length = 576
Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/446 (56%), Positives = 331/446 (74%), Gaps = 25/446 (5%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K ++ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 6 TKKRVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKAVMEEMTK 65
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DYV+FL I PD + +++ ++N+GEDCPVF+ L+EFCQ+ +GG++ A +LN
Sbjct: 66 YHSDDYVKFLRTIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAGAVKLNK 125
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 126 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 185
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY TDR VMTVSFHK+G+ +FPGTGD+++IG +GK+YA
Sbjct: 186 FYTTDR----------------------VMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYA 222
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+N PL+DGIDD S+ ++FK I+ KV+E Y P AI LQCGADSL+GDRLGCFNL++ GHA+
Sbjct: 223 VNFPLRDGIDDESYDKIFKPIMCKVMEMYQPSAICLQCGADSLSGDRLGCFNLTLKGHAK 282
Query: 303 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 362
CV F+K++NLPLL+ GGGGYT NVARCWT ET L E+ NE+P N+Y +YF P+ L
Sbjct: 283 CVEFMKQYNLPLLLMGGGGYTIRNVARCWTYETSTALGVEIANELPYNDYFEYFGPDFKL 342
Query: 363 RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFD-EDE-QNPD 420
I ++ N N+ YL IK ++ EN+R I HAP VQMQ +P D + D EDE +NPD
Sbjct: 343 HISPSNMTNQNTGEYLDKIKTRLYENMRMIPHAPGVQMQPIPEDAIPDDSDAEDEAENPD 402
Query: 421 ERMDQHTQDKQIQRDDEFYEGDNDND 446
+R+ QDK+IQRDDEF + +++ +
Sbjct: 403 KRISIMAQDKRIQRDDEFSDSEDEGE 428
>sp|Q92769|HDAC2_HUMAN Histone deacetylase 2 OS=Homo sapiens GN=HDAC2 PE=1 SV=2
Length = 488
Score = 517 bits (1331), Expect = e-146, Method: Compositional matrix adjust.
Identities = 247/444 (55%), Positives = 328/444 (73%), Gaps = 24/444 (5%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K K+ Y+YDGD+G+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ ++
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
HS +Y++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ A +LN Q
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188
Query: 184 YFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAI 243
Y TDR VMTVSFHK+G+ +FPGTGD+++IG +GK+YA+
Sbjct: 189 YTTDR----------------------VMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAV 225
Query: 244 NVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAEC 303
N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+C
Sbjct: 226 NFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKC 285
Query: 304 VRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLR 363
V VK FNLPLL+ GGGGYT NVARCWT ET + LD E+PNE+P N+Y +YF P+ L
Sbjct: 286 VEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLH 345
Query: 364 IPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDER 422
I ++ N N+ Y+ IK ++ ENLR + HAP VQMQ +P D + DED ++PD+R
Sbjct: 346 ISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR 405
Query: 423 MDQHTQDKQIQRDDEFYEGDNDND 446
+ DK+I D+EF + +++ +
Sbjct: 406 ISIRASDKRIACDEEFSDSEDEGE 429
>sp|P70288|HDAC2_MOUSE Histone deacetylase 2 OS=Mus musculus GN=Hdac2 PE=1 SV=1
Length = 488
Score = 515 bits (1327), Expect = e-145, Method: Compositional matrix adjust.
Identities = 246/444 (55%), Positives = 327/444 (73%), Gaps = 24/444 (5%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K K+ Y+YDGD+G+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ ++
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
HS +Y++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ A +LN Q
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188
Query: 184 YFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAI 243
Y TDR VMTVSFHK+G+ +FPGTGD+++IG +GK+YA+
Sbjct: 189 YTTDR----------------------VMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAV 225
Query: 244 NVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAEC 303
N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+C
Sbjct: 226 NFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKC 285
Query: 304 VRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLR 363
V K FNLPLL+ GGGGYT NVARCWT ET + LD E+PNE+P N+Y +YF P+ L
Sbjct: 286 VEVAKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLH 345
Query: 364 IPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDER 422
I ++ N N+ Y+ IK ++ ENLR + HAP VQMQ +P D + DED ++PD+R
Sbjct: 346 ISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR 405
Query: 423 MDQHTQDKQIQRDDEFYEGDNDND 446
+ DK+I D+EF + +++ +
Sbjct: 406 ISIRASDKRIACDEEFSDSEDEGE 429
>sp|Q94517|HDAC1_DROME Histone deacetylase Rpd3 OS=Drosophila melanogaster GN=Rpd3 PE=1
SV=2
Length = 521
Score = 514 bits (1325), Expect = e-145, Method: Compositional matrix adjust.
Identities = 243/445 (54%), Positives = 326/445 (73%), Gaps = 24/445 (5%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
SK ++ Y+YD D+G+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 5 SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
FHS +YV FL I PD + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN
Sbjct: 65 FHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY TDR VMTVSFHK+G+ +FPGTGD+++IG +GK+YA
Sbjct: 185 FYTTDR----------------------VMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYA 221
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+N+PL+DG+DD ++ +F IISKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +
Sbjct: 222 VNIPLRDGMDDDAYESIFVPIISKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGK 281
Query: 303 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 362
CV FVKK+NLP L+ GGGGYT NV+RCWT ET + L E+ NE+P N+Y +YF P+ L
Sbjct: 282 CVEFVKKYNLPFLMVGGGGYTIRNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKL 341
Query: 363 RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE-FDEDEQNPDE 421
I ++ N N+ YL IK ++ ENLR + HAP VQ+Q +P D E DED+ + D+
Sbjct: 342 HISPSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPEDAINDESDDEDKVDKDD 401
Query: 422 RMDQHTQDKQIQRDDEFYEGDNDND 446
R+ Q +DK+I ++E+ + +++ +
Sbjct: 402 RLPQSDKDKRIVPENEYSDSEDEGE 426
>sp|P56520|HDAC3_CHICK Histone deacetylase 3 OS=Gallus gallus GN=HDAC3 PE=2 SV=1
Length = 428
Score = 514 bits (1325), Expect = e-145, Method: Compositional matrix adjust.
Identities = 244/442 (55%), Positives = 320/442 (72%), Gaps = 27/442 (6%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P+ F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVP 246
DR VMTVSFHK+G+ FFPGTGD+ E+G G++YA+NVP
Sbjct: 185 DR----------------------VMTVSFHKYGNYFFPGTGDMYEVGAESGRYYALNVP 222
Query: 247 LKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRF 306
L+DGIDD S+ LF+ +I++VV+ Y P IVLQCGADSL DRLGCFNLSI GH ECV +
Sbjct: 223 LRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGRDRLGCFNLSIRGHGECVEY 282
Query: 307 VKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP- 365
VK FN+PLLV GGGGYT NVARCWT ET +L+D + E+P +EY +YFAP+ +L
Sbjct: 283 VKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDV 342
Query: 366 NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDE-DEQNPDERMD 424
+ IEN NS+ YL I+ + ENL+ + HAPSVQ+ +VP D + +D DE +P+ER
Sbjct: 343 STRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSD--LLSYDRTDEPDPEERGS 400
Query: 425 QHTQDKQIQRDDEFYEGDNDND 446
+ + + +EFY+GD+DND
Sbjct: 401 EENYSRP-EAANEFYDGDHDND 421
>sp|Q28DV3|HDAC3_XENTR Histone deacetylase 3 OS=Xenopus tropicalis GN=hdac3 PE=2 SV=1
Length = 428
Score = 511 bits (1316), Expect = e-144, Method: Compositional matrix adjust.
Identities = 241/441 (54%), Positives = 317/441 (71%), Gaps = 25/441 (5%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P+ F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLY+DID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYVDIDIHHGDGVQEAFYLT 184
Query: 187 DRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVP 246
DR VMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVP
Sbjct: 185 DR----------------------VMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVP 222
Query: 247 LKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRF 306
L+DGIDD S+ LF+ +I +V++ Y P IVLQCGADSL DRLGCFNLSI GH ECV++
Sbjct: 223 LRDGIDDQSYRHLFQPVIKQVIDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVQY 282
Query: 307 VKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP- 365
VK FN+PLLV GGGGYT NVARCWT ET +L+D + E+P +EY +YFAP+ +L
Sbjct: 283 VKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDETISEELPYSEYFEYFAPDFTLHPDV 342
Query: 366 NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQ 425
+ IEN NS+ YL I+ + ENL+ + HAPSVQ+ +VP D E DE +P+ER +
Sbjct: 343 STRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDILSYE-RTDEPDPEERGSE 401
Query: 426 HTQDKQIQRDDEFYEGDNDND 446
+ + +EFY+GD+DND
Sbjct: 402 DNYSRP-EASNEFYDGDHDND 421
>sp|Q55BW2|HDA12_DICDI Histone deacetylase B OS=Dictyostelium discoideum GN=hdaB PE=2 SV=1
Length = 422
Score = 510 bits (1313), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/433 (56%), Positives = 324/433 (74%), Gaps = 32/433 (7%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
SK ++ YF+D DVG+ ++GP HPMKPHRLC+T++LVL+Y LHKKM +Y+ A ++ +
Sbjct: 11 SKTRVCYFFDQDVGNYFYGPYHPMKPHRLCLTNNLVLNYGLHKKMHLYKARPADAEDMLK 70
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
FHS DYV+FL R+TP+ + ++ ++ ++++GEDCPVF L+++C IY+GG+I+ A +LN+
Sbjct: 71 FHSEDYVDFLERVTPENINEWK-DVKRFHIGEDCPVFPGLYDYCSIYSGGSIEGALKLNH 129
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
++ DIAINW+GGLHHA+K EASGFCY+ND+VL ILELLK+HARVLYIDIDVHHGDGV+EA
Sbjct: 130 RMYDIAINWSGGLHHARKDEASGFCYVNDIVLAILELLKFHARVLYIDIDVHHGDGVQEA 189
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY TDR VMTVSFHKFG FFPGTGD+ EIG + GK Y+
Sbjct: 190 FYLTDR----------------------VMTVSFHKFGGDFFPGTGDIDEIGAKTGKLYS 227
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+NVPL DGIDD ++ +FK +I V++ Y P IVLQCGADSL DRLGCFNL+I GHAE
Sbjct: 228 VNVPLADGIDDKNYLNIFKPVIQGVMDYYRPSVIVLQCGADSLRFDRLGCFNLTIKGHAE 287
Query: 303 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 362
CVRFVK FN+P LV GGGGYT NVARCWT ET + +DTE+ NE+P N+YI++++P+ L
Sbjct: 288 CVRFVKSFNIPTLVLGGGGYTVRNVARCWTYETSVCVDTEVNNELPYNDYIQFYSPDFQL 347
Query: 363 RIPN-----GHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDE- 416
IP+ EN N+KSYL ++++++LENLR +Q APSVQ+Q+VPPD +FD DE
Sbjct: 348 -IPDYTGLPFKYENANTKSYLESLRIKILENLRILQWAPSVQIQDVPPDIMPIDFDRDED 406
Query: 417 --QNPDERMDQHT 427
+N D+R +H
Sbjct: 407 SKENMDKRKKKHN 419
>sp|Q4SFA0|HDAC3_TETNG Histone deacetylase 3 OS=Tetraodon nigroviridis GN=hdac3 PE=3 SV=1
Length = 428
Score = 510 bits (1313), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/443 (55%), Positives = 318/443 (71%), Gaps = 25/443 (5%)
Query: 5 DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
++ SYFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P+KA ++ +FH
Sbjct: 3 NRTSYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFH 62
Query: 65 SADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
S DY++FL +++P+ F + L +N+G+DCPVF LFEFC Y G ++ A +LN+++
Sbjct: 63 SEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNHKI 122
Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
CDIAINWAGGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 185 FTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAIN 244
TDR VMTVSFHK+G+ FFPGTGD+ E+G G++Y +N
Sbjct: 183 LTDR----------------------VMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLN 220
Query: 245 VPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECV 304
VPL+DGIDD S+ +LF+ +I +VV+ Y P IVLQCGADSL DRLGCFNLSI GH ECV
Sbjct: 221 VPLRDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECV 280
Query: 305 RFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 364
FVK F +PLLV GGGGYT NVARCWT ET +LL+ + +E+P +EY +YFAP+ +L
Sbjct: 281 EFVKSFKIPLLVLGGGGYTVRNVARCWTFETSLLLEESISDELPYSEYFEYFAPDFTLHP 340
Query: 365 P-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERM 423
+ IEN NS+ YL I+ V ENL+ + HAPSVQ+ +VP D E + DE +PDER
Sbjct: 341 DVSTRIENQNSRQYLEQIRQTVFENLKMLNHAPSVQIHDVPSDMLNYERN-DEPDPDERG 399
Query: 424 DQHTQDKQIQRDDEFYEGDNDND 446
+ + + +EFY+GD+DND
Sbjct: 400 AEENYTRP-EAANEFYDGDHDND 421
>sp|Q6P6W3|HDAC3_RAT Histone deacetylase 3 OS=Rattus norvegicus GN=Hdac3 PE=1 SV=1
Length = 428
Score = 508 bits (1308), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/445 (54%), Positives = 315/445 (70%), Gaps = 33/445 (7%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVP 246
DR VMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVP
Sbjct: 185 DR----------------------VMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVP 222
Query: 247 LKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRF 306
L+DGIDD S+ LF+ +IS+VV+ Y P IVLQCGADSL DRLGCFNLSI GH ECV +
Sbjct: 223 LRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEY 282
Query: 307 VKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP- 365
VK FN+PLLV GGGGYT NVARCWT ET +L++ + E+P +EY +YFAP+ +L
Sbjct: 283 VKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDV 342
Query: 366 NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY----IPEFDEDEQNPDE 421
+ IEN NS+ YL I+ + ENL+ + HAPSVQ+ +VP D E D +E+ P+E
Sbjct: 343 STRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEE 402
Query: 422 RMDQHTQDKQIQRDDEFYEGDNDND 446
+ + +EFY+GD+DND
Sbjct: 403 NY------SRPEAPNEFYDGDHDND 421
>sp|O88895|HDAC3_MOUSE Histone deacetylase 3 OS=Mus musculus GN=Hdac3 PE=1 SV=1
Length = 424
Score = 508 bits (1308), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/445 (54%), Positives = 315/445 (70%), Gaps = 33/445 (7%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVP 246
DR VMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVP
Sbjct: 185 DR----------------------VMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVP 222
Query: 247 LKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRF 306
L+DGIDD S+ LF+ +IS+VV+ Y P IVLQCGADSL DRLGCFNLSI GH ECV +
Sbjct: 223 LRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEY 282
Query: 307 VKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP- 365
VK FN+PLLV GGGGYT NVARCWT ET +L++ + E+P +EY +YFAP+ +L
Sbjct: 283 VKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDV 342
Query: 366 NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY----IPEFDEDEQNPDE 421
+ IEN NS+ YL I+ + ENL+ + HAPSVQ+ +VP D E D +E+ P+E
Sbjct: 343 STRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEE 402
Query: 422 RMDQHTQDKQIQRDDEFYEGDNDND 446
+ + +EFY+GD+DND
Sbjct: 403 NY------SRPEAPNEFYDGDHDND 421
>sp|O15379|HDAC3_HUMAN Histone deacetylase 3 OS=Homo sapiens GN=HDAC3 PE=1 SV=2
Length = 428
Score = 507 bits (1305), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/445 (54%), Positives = 315/445 (70%), Gaps = 33/445 (7%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVP 246
DR VMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVP
Sbjct: 185 DR----------------------VMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVP 222
Query: 247 LKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRF 306
L+DGIDD S+ LF+ +I++VV+ Y P IVLQCGADSL DRLGCFNLSI GH ECV +
Sbjct: 223 LRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEY 282
Query: 307 VKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP- 365
VK FN+PLLV GGGGYT NVARCWT ET +L++ + E+P +EY +YFAP+ +L
Sbjct: 283 VKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDV 342
Query: 366 NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY----IPEFDEDEQNPDE 421
+ IEN NS+ YL I+ + ENL+ + HAPSVQ+ +VP D E D +E+ P+E
Sbjct: 343 STRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEE 402
Query: 422 RMDQHTQDKQIQRDDEFYEGDNDND 446
+ + +EFY+GD+DND
Sbjct: 403 NY------SRPEAPNEFYDGDHDND 421
>sp|Q6IRL9|HDAC3_XENLA Histone deacetylase 3 OS=Xenopus laevis GN=hdac3 PE=2 SV=2
Length = 428
Score = 506 bits (1302), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/441 (54%), Positives = 315/441 (71%), Gaps = 25/441 (5%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P+ F + L +N+G+DCPVF LFEFC Y G ++ A LNN+ CD
Sbjct: 65 DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATLLNNKNCD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVP 246
DR VMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVP
Sbjct: 185 DR----------------------VMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVP 222
Query: 247 LKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRF 306
L+DGIDD S+ LF+ +I +V++ Y P IVLQCGADSL DRLGCFNLSI GH ECV++
Sbjct: 223 LRDGIDDQSYRHLFQPVIKQVIDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVQY 282
Query: 307 VKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP- 365
VK FN+PLLV GGGGYT NVARCWT ET +L+D + E+P +EY +YFAP+ +L
Sbjct: 283 VKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDETISEELPYSEYFEYFAPDFTLHPDV 342
Query: 366 NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQ 425
+ IEN NS+ YL I+ V E+L+ + HAPSVQ+ +VP D E DE +P+ER +
Sbjct: 343 STRIENQNSRQYLDQIRQTVFESLKMLNHAPSVQIHDVPSDILNYE-RTDEPDPEERGGE 401
Query: 426 HTQDKQIQRDDEFYEGDNDND 446
+ + +EFY+GD+DND
Sbjct: 402 DNYSRP-EASNEFYDGDHDND 421
>sp|Q5RB76|HDAC3_PONAB Histone deacetylase 3 OS=Pongo abelii GN=HDAC3 PE=2 SV=1
Length = 428
Score = 504 bits (1299), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/445 (53%), Positives = 315/445 (70%), Gaps = 33/445 (7%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVP 246
DR VMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVP
Sbjct: 185 DR----------------------VMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVP 222
Query: 247 LKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRF 306
L+DGIDD S+ LF+ +I++VV+ Y P IVLQCGADSL DRLGCFNLSI GH ECV +
Sbjct: 223 LRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEY 282
Query: 307 VKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP- 365
VK FN+PLLV GGGGYT NVARCWT ET +L++ + E+P +EY +YFAP+ +L
Sbjct: 283 VKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDV 342
Query: 366 NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY----IPEFDEDEQNPDE 421
+ IEN NS+ YL I+ + ENL+ + HAPSVQ+++VP E D +E+ P+E
Sbjct: 343 STRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIRDVPAGLLTYDRTDEADAEERGPEE 402
Query: 422 RMDQHTQDKQIQRDDEFYEGDNDND 446
+ + +EFY+GD+DND
Sbjct: 403 NY------SRPEAPNEFYDGDHDND 421
>sp|Q803C3|HDAC3_DANRE Histone deacetylase 3 OS=Danio rerio GN=hdac3 PE=2 SV=1
Length = 428
Score = 504 bits (1297), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/443 (54%), Positives = 317/443 (71%), Gaps = 25/443 (5%)
Query: 5 DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
++ +YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P+KA ++ +FH
Sbjct: 3 NRTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFH 62
Query: 65 SADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
S DY++FL +++P+ F + L +N+G DCPVF LFEFC Y G ++ A +LN+++
Sbjct: 63 SEDYIDFLQKVSPNNMQGFTKSLNTFNVGGDCPVFPGLFEFCSRYTGASLQGATQLNHKI 122
Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
CDIAINWAGGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 185 FTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAIN 244
TDR VMTVSFHK+G+ FFPGTGD+ E+G G++Y +N
Sbjct: 183 LTDR----------------------VMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLN 220
Query: 245 VPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECV 304
VPL+DGIDD S+ +LF+ +I +VV+ Y P IVLQCGADSL DRLGCFNLSI GH ECV
Sbjct: 221 VPLRDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECV 280
Query: 305 RFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 364
FVK F +PLLV GGGGYT NVARCWT ET +L++ + +E+P +EY +YFAP+ +L
Sbjct: 281 EFVKGFKIPLLVLGGGGYTVRNVARCWTFETSLLVEESISDELPYSEYFEYFAPDFTLHP 340
Query: 365 P-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERM 423
+ IEN NS+ YL I+ V ENL+ + HAPSVQ+++VP D E DE +P+ER
Sbjct: 341 DVSTRIENQNSRQYLEQIRQTVFENLKMLNHAPSVQIRDVPSDLLSYE-RPDEADPEERG 399
Query: 424 DQHTQDKQIQRDDEFYEGDNDND 446
+ + + +EFY+GD+D+D
Sbjct: 400 SEENFSRP-EAANEFYDGDHDHD 421
>sp|P56519|HDAC2_CHICK Histone deacetylase 2 OS=Gallus gallus GN=HDAC2 PE=2 SV=1
Length = 488
Score = 502 bits (1292), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/444 (53%), Positives = 320/444 (72%), Gaps = 24/444 (5%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K K+ Y+YDGD+G+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ ++
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
HS +Y++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ A +LN Q
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188
Query: 184 YFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAI 243
Y TDR++ ++ FPGTGD+++IG +GK+YA+
Sbjct: 189 YTTDRVMTVSEVSMVNN-----------------------FPGTGDLRDIGAGKGKYYAV 225
Query: 244 NVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAEC 303
N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+C
Sbjct: 226 NFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKC 285
Query: 304 VRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLR 363
V VK FNLPLL+ GGGGYT NVARCWT ET + LD E+PNE+P N+Y +YF P+ L
Sbjct: 286 VEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLH 345
Query: 364 IPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDER 422
I ++ N N+ Y+ IK ++ ENLR + HAP VQMQ +P D + DED ++PD+R
Sbjct: 346 ISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR 405
Query: 423 MDQHTQDKQIQRDDEFYEGDNDND 446
+ DK+I D+EF + +++ +
Sbjct: 406 ISIRASDKRIACDEEFSDSEDEGE 429
>sp|Q91695|HDA1A_XENLA Probable histone deacetylase 1-A OS=Xenopus laevis GN=hdac1-a PE=1
SV=1
Length = 480
Score = 501 bits (1290), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/445 (55%), Positives = 331/445 (74%), Gaps = 24/445 (5%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEI+RPHKA ++ +
Sbjct: 7 TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIFRPHKASAEDMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DI++NW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RV+YIDID+HHGDGVEEA
Sbjct: 127 QQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY TDR VMTVSFHK+G+ +FPGTGD+++IG +GK+YA
Sbjct: 187 FYTTDR----------------------VMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYA 223
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+N L+DGIDD S+ +FK ++SKV+E + P A+VLQCGADSL+GDRLGCFNL+I GHA+
Sbjct: 224 VNYALRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGADSLSGDRLGCFNLTIKGHAK 283
Query: 303 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 362
CV F+K FNLPLL+ GGGGYT NVARCWT ET + LD+E+PNE+P N+Y +YF P+ L
Sbjct: 284 CVEFIKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKL 343
Query: 363 RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDE 421
I ++ N N+ YL IK ++ ENLR + HAP VQMQ V D + +EDE +PD+
Sbjct: 344 HISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAVAEDSIHDDSGEEDEDDPDK 403
Query: 422 RMDQHTQDKQIQRDDEFYEGDNDND 446
R+ + DK+I D+EF + +++ +
Sbjct: 404 RISIRSSDKRIACDEEFSDSEDEGE 428
>sp|O17695|HDA1_CAEEL Histone deacetylase 1 OS=Caenorhabditis elegans GN=hda-1 PE=1 SV=1
Length = 461
Score = 500 bits (1287), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/448 (52%), Positives = 312/448 (69%), Gaps = 27/448 (6%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
K +++Y+YD ++G+ Y+G H MKPHR+ MTHHLVL+Y L++ +EI+RP A ++ +
Sbjct: 11 GKRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMTR 70
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
FHS +Y+ FL PD F +++ K+N+GEDCP+F+ L+EFCQ+ +GG++ AA +LN
Sbjct: 71 FHSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNK 130
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIAINW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEA
Sbjct: 131 QKVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEA 190
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY TDR VMTVSFHK+GD FFPGTGD+K+IG +GK Y+
Sbjct: 191 FYTTDR----------------------VMTVSFHKYGD-FFPGTGDLKDIGAGKGKLYS 227
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+NVPL+DGI D S+ +FK I++KV+E + P A+VLQCGADSL GDRLG FNL++ GH E
Sbjct: 228 VNVPLRDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGE 287
Query: 303 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 362
C RF + +N+PL++ GGGGYT NVARCWT ET I +D E+PNE+P N+Y +YF P L
Sbjct: 288 CARFFRSYNVPLMMVGGGGYTPRNVARCWTYETSIAVDKEVPNELPYNDYFEYFGPNYRL 347
Query: 363 RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDE----DEQN 418
I + + N NS L+ ++ V+ NL + PSVQM+ +P D D+ D+ N
Sbjct: 348 HIESSNAANENSSDMLAKLQTDVIANLEQLTFVPSVQMRPIPEDALSALNDDSLIADQAN 407
Query: 419 PDERMDQHTQDKQIQRDDEFYEGDNDND 446
PD+R+ D IQ D +FY+G+ + D
Sbjct: 408 PDKRLPPQITDGMIQDDGDFYDGEREGD 435
>sp|O22446|HDA19_ARATH Histone deacetylase 19 OS=Arabidopsis thaliana GN=HDA19 PE=1 SV=2
Length = 501
Score = 491 bits (1265), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/419 (57%), Positives = 308/419 (73%), Gaps = 23/419 (5%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K K+ YFYD +VG+ Y+G HPMKPHR+ MTH L+ Y L + M++ +P A +L +F
Sbjct: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRF 75
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
H+ DYV FL ITP+TQ ++L ++N+GEDCPVF+ L+ FCQ YAGG++ + +LN+
Sbjct: 76 HADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHG 135
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
LCDIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
Query: 184 YFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAI 243
Y TDR VMTVSFHKFGD +FPGTG +++IG GK+Y++
Sbjct: 196 YATDR----------------------VMTVSFHKFGD-YFPGTGHIQDIGYGSGKYYSL 232
Query: 244 NVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAEC 303
NVPL DGIDD S+ LFK I+ KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAEC
Sbjct: 233 NVPLDDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAEC 292
Query: 304 VRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLR 363
V+F++ FN+PLL+ GGGGYT NVARCW ETG+ L E+ +++PE+EY +YF P+ +L
Sbjct: 293 VKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLH 352
Query: 364 IPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDER 422
+ ++EN NS+ L I+ +L NL +QHAPSV QE PPD PE DED+++ D+R
Sbjct: 353 VAPSNMENKNSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPDTETPEVDEDQEDGDKR 411
>sp|P32561|RPD3_YEAST Histone deacetylase RPD3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPD3 PE=1 SV=1
Length = 433
Score = 480 bits (1236), Expect = e-135, Method: Compositional matrix adjust.
Identities = 223/439 (50%), Positives = 305/439 (69%), Gaps = 26/439 (5%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K +++YFYD DVG+ +G HPMKPHR+ M H L+++Y L+KKMEIYR A E+ QF
Sbjct: 18 KRRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
H+ +Y++FL R+TPD +F++E K+N+G+DCPVF+ L+E+C I GG+++ A RLN
Sbjct: 78 HTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
CD+A+N+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197
Query: 184 YFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAI 243
Y TDR VMT SFHK+G+ FFPGTG++++IG GK YA+
Sbjct: 198 YTTDR----------------------VMTCSFHKYGE-FFPGTGELRDIGVGAGKNYAV 234
Query: 244 NVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAEC 303
NVPL+DGIDD ++ +F+ +I K++E Y P A+VLQCG DSL+GDRLGCFNLS++GHA C
Sbjct: 235 NVPLRDGIDDATYRSVFEPVIKKIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANC 294
Query: 304 VRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLR 363
V +VK F +P++V GGGGYT NVAR W ETG+L + L ++P NEY +Y+ P+ L
Sbjct: 295 VNYVKSFGIPMMVVGGGGYTMRNVARTWCFETGLLNNVVLDKDLPYNEYYEYYGPDYKLS 354
Query: 364 IPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVP---PDFYIPEFDEDEQNPD 420
+ ++ N+N+ YL + + NL + ++APSVQ+ P D E D E
Sbjct: 355 VRPSNMFNVNTPEYLDKVMTNIFANLENTKYAPSVQLNHTPRDAEDLGDVEEDSAEAKDT 414
Query: 421 ERMDQHTQDKQIQRDDEFY 439
+ Q+ +D ++ D+EFY
Sbjct: 415 KGGSQYARDLHVEHDNEFY 433
>sp|Q9FML2|HDA6_ARATH Histone deacetylase 6 OS=Arabidopsis thaliana GN=HDA6 PE=1 SV=1
Length = 471
Score = 474 bits (1219), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/446 (52%), Positives = 305/446 (68%), Gaps = 34/446 (7%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K ++SYFY+ +G Y+G HPMKPHR+ M H L++ Y LH+++EI RP A ++ +F
Sbjct: 18 KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEISRPSLADASDIGRF 77
Query: 64 HSADYVEFLHRITPDTQH--LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
HS +YV+FL ++P++ + L ++N+GEDCPVF+ LF+FC+ AGG+I AA +LN
Sbjct: 78 HSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLN 137
Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
Q DIAINW GGLHHAKK EASGFCY+ND+VLGILELLK RVLYIDIDVHHGDGVEE
Sbjct: 138 RQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLYIDIDVHHGDGVEE 197
Query: 182 AFYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFY 241
AFY TDR VMTVSFHKFGD FFPGTG ++++G +GK+Y
Sbjct: 198 AFYTTDR----------------------VMTVSFHKFGD-FFPGTGHIRDVGAEKGKYY 234
Query: 242 AINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHA 301
A+NVPL DG+DD SF LF+ +I KV+E Y P A+VLQCGADSL+GDRLGCFNLS+ GHA
Sbjct: 235 ALNVPLNDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHA 294
Query: 302 ECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECS 361
+C+RF++ +N+PL+V GGGGYT NVARCW ET + + E N++P NEY +YF P+ +
Sbjct: 295 DCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYT 354
Query: 362 LRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDE 421
L + +ENLN+ + I+ +LE L + HAPSVQ Q PP + + ED
Sbjct: 355 LHVDPSPMENLNTPKDMERIRNTLLEQLSGLIHAPSVQFQHTPPVNRVLDEPED------ 408
Query: 422 RMDQHTQDK-QIQRDDEFYEGDNDND 446
D T+ K +I YE D+D+D
Sbjct: 409 --DMETRPKPRIWSGTATYESDSDDD 432
>sp|O59702|CLR6_SCHPO Histone deacetylase clr6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=clr6 PE=1 SV=1
Length = 405
Score = 474 bits (1219), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/423 (52%), Positives = 300/423 (70%), Gaps = 23/423 (5%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
K K+SYFYD DVG+ ++GP HPMKPHR+ M H+LV++Y+L++K+ + P +A ++ +
Sbjct: 4 GKKKVSYFYDEDVGNYHYGPQHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMTR 63
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
H+ +Y+EFL R+TPDT F+ K+N+G+DCPVF+ L+EFC I AGG+I AA+ LN+
Sbjct: 64 CHTDEYIEFLWRVTPDTMEKFQPHQLKFNVGDDCPVFDGLYEFCSISAGGSIGAAQELNS 123
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
+IAINWAGGLHHAKK EASGFCY+ND+ L LELLKYH RVLYIDIDVHHGDGVEE
Sbjct: 124 GNAEIAINWAGGLHHAKKREASGFCYVNDIALAALELLKYHQRVLYIDIDVHHGDGVEEF 183
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY TDR VMT SFHKFG+ +FPGTG +K+ G GK YA
Sbjct: 184 FYTTDR----------------------VMTCSFHKFGE-YFPGTGHIKDTGIGTGKNYA 220
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+NVPL+DGIDD S+ +FK +IS +++ + P A++LQCG DSLAGDRLGCFNLS+ GH+
Sbjct: 221 VNVPLRDGIDDESYESVFKPVISHIMQWFRPEAVILQCGTDSLAGDRLGCFNLSMKGHSM 280
Query: 303 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 362
CV FVK FNLP++ GGGGYT NVAR WT ETG+L EL +P N+Y++Y+ P+ L
Sbjct: 281 CVDFVKSFNLPMICVGGGGYTVRNVARVWTYETGLLAGEELDENLPYNDYLQYYGPDYKL 340
Query: 363 RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDER 422
+ + ++EN N++ YL +I +++ENLR++ APSVQM + P DF ++ +E
Sbjct: 341 NVLSNNMENHNTRQYLDSITSEIIENLRNLSFAPSVQMHKTPGDFTFENAEKQNIAKEEI 400
Query: 423 MDQ 425
MD+
Sbjct: 401 MDE 403
>sp|P56521|HDA19_MAIZE Probable histone deacetylase 19 OS=Zea mays PE=2 SV=1
Length = 513
Score = 456 bits (1173), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/406 (55%), Positives = 292/406 (71%), Gaps = 28/406 (6%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K ++ YFYD DVG+ Y+G HPMKPHR+ MTH L+ Y L +M++YRP+ A EL +F
Sbjct: 22 KRRVCYFYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVYRPNPARERELCRF 81
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
H+ +Y+ FL +TP+TQ + L ++N+GE+CPV + L+ FCQ YAG ++ A + N+
Sbjct: 82 HAEEYINFLRSVTPETQQDQIRLLKRFNVGEECPVLDGLYSFCQTYAGASVGGAVKFNHG 141
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
DIAINW+GGLHHAKKCEASGFCY+ND+VL ILELLK+H RVLY+DID+HHGDGVEEAF
Sbjct: 142 H-DIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEAF 200
Query: 184 YFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAI 243
Y TDR VMTVSFHKFGD +FPGTGD+++IG +GK+Y++
Sbjct: 201 YTTDR----------------------VMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSL 237
Query: 244 NVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAEC 303
NVPL DGIDD S+ LFK I+ KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAEC
Sbjct: 238 NVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAEC 297
Query: 304 VRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLR 363
VR+++ FN+PLL+ GGGGYT NVARCW ETG+ L E +++P NEY +YF P+ +L
Sbjct: 298 VRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQEPEDKMPVNEYYEYFGPDYTLH 357
Query: 364 IPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYI 409
+ ++EN N++ L I+ + L ++HAPSV QE PD I
Sbjct: 358 VAPSNMENKNTRQQLDDIRSK----LSKLRHAPSVHFQERVPDTEI 399
>sp|O13298|PHD1_SCHPO Histone deacetylase phd1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=phd1 PE=1 SV=1
Length = 434
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/425 (49%), Positives = 289/425 (68%), Gaps = 26/425 (6%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K +++Y D VG+ ++G HPMKPHR+ +T+HLV+ Y LH KM ++ P A E+++F
Sbjct: 25 KKRVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSEF 84
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
H DY++FL R+TPD F + ++N+G+DCPVF+ +EF Q AG ++DA+R+L
Sbjct: 85 HREDYLDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQG 144
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
DIAINW+GGLHHAK+ EASGFCY+ND+VL IL +L++ RVLYIDID+HHGDGV++AF
Sbjct: 145 QTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQAF 204
Query: 184 YFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAI 243
Y +DR V+TVSFHK+ FFP TG+ E G + GK++A+
Sbjct: 205 YESDR----------------------VLTVSFHKYNGDFFPATGNFDENGVKGGKYFAL 242
Query: 244 NVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAEC 303
NVPL+DGI D +T LFK+II + T+ P AIVLQCGADSL DRLG FNLSI H EC
Sbjct: 243 NVPLEDGIGDEQYTSLFKSIIEPTINTFQPSAIVLQCGADSLGYDRLGVFNLSIHAHGEC 302
Query: 304 VRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIP-ENEYIKYFAPECSL 362
VRF + FN+P+LV GGGGYT NVAR W ET I ++ ++P+E+P E Y ++FAP+ +L
Sbjct: 303 VRFTRSFNIPMLVVGGGGYTLRNVARAWCYETSICVNEQIPSELPRETLYYEFFAPDYTL 362
Query: 363 --RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPD 420
R+ IEN N+ L ++++ LE LR + APSVQMQ++PPD +EDE+ D
Sbjct: 363 HPRLTT-KIENKNTPKALEDLRIRALEQLRYLGGAPSVQMQQIPPDLTGHLEEEDERLND 421
Query: 421 ERMDQ 425
E +D+
Sbjct: 422 EYLDK 426
>sp|P53096|HOS2_YEAST Probable histone deacetylase HOS2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HOS2 PE=1 SV=1
Length = 452
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/437 (50%), Positives = 287/437 (65%), Gaps = 26/437 (5%)
Query: 6 KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
++SY ++ V ++G HPMKP RL +T HLV SY LHK M++Y A EL QFHS
Sbjct: 27 RVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHS 86
Query: 66 ADYVEFLHRITPDTQH-LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
DYV FL +++P+ + L R L +N+G+DCP+F+NL+++ +Y G ++DA R+L N
Sbjct: 87 EDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQ 146
Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
DIAINW+GGLHHAKK SGFCY+ND+VL IL LL+YH R+LYIDID+HHGDGV+EAFY
Sbjct: 147 SDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFY 206
Query: 185 FTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAIN 244
TDR V T+SFHK+ FFPGTGD+ EIG +GK +A+N
Sbjct: 207 TTDR----------------------VFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALN 244
Query: 245 VPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECV 304
VPL+DGIDD S+ LFK+I+ ++ T+ P IV QCGADSL DRLGCFNL+I H ECV
Sbjct: 245 VPLEDGIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECV 304
Query: 305 RFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSLR 363
+FVK F LP+LV GGGGYT NV+R WT ETGIL D LP +IPE+ + F P+ SL
Sbjct: 305 KFVKSFGLPMLVVGGGGYTPRNVSRLWTYETGILNDVLLPEDIPEDIPFRDSFGPDYSLY 364
Query: 364 -IPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQM-QEVPPDFYIPEFDEDEQNPDE 421
+ + EN NSK L I+++ LEN+R +Q APSV+M E P I E+E +
Sbjct: 365 PMLDDLYENKNSKKLLEDIRIRCLENIRYLQGAPSVRMDAECIPTQDISALTEEEDKIIQ 424
Query: 422 RMDQHTQDKQIQRDDEF 438
M++ T+ R +E
Sbjct: 425 EMNEETEADSSNRLEEM 441
>sp|Q09440|HDA2_CAEEL Putative histone deacetylase 2 OS=Caenorhabditis elegans GN=hda-2
PE=3 SV=1
Length = 507
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/429 (47%), Positives = 280/429 (65%), Gaps = 32/429 (7%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K ++Y+Y DVG ++G HPMKP RL + + LV+SY++ K M + K +++ F
Sbjct: 28 KRNVAYYYHKDVGHFHYGQLHPMKPQRLVVCNDLVVSYEMPKYMTVVESPKLDAADISVF 87
Query: 64 HSADYVEFLHRITPDTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
H+ DYV FL +TP + L ++N+GEDCP+F L+++C +YAGG+++ ARRLN+
Sbjct: 88 HTEDYVNFLQTVTPKLGLTMPDDVLRQFNIGEDCPIFAGLWDYCTLYAGGSVEGARRLNH 147
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
++ DI INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDID+HHGDGV+EA
Sbjct: 148 KMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDIHHGDGVQEA 207
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
F +DR VMTVSFH+FG +FPG+G + + G GK++A
Sbjct: 208 FNNSDR----------------------VMTVSFHRFGQ-YFPGSGSIMDKGVGPGKYFA 244
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
INVPL I D + +LF+++IS V E + P AIVLQCG+DSL DRLG F LS + HA
Sbjct: 245 INVPLMAAIRDEPYLKLFESVISGVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHAR 304
Query: 303 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE-YIKYFAPECS 361
V++VK PL+V GGGGYT NVARCW +ETG++L + +EIP Y YF P
Sbjct: 305 AVKYVKSLGKPLMVLGGGGYTLRNVARCWALETGVILGLRMDDEIPGTSLYSHYFTPR-- 362
Query: 362 LRIPN--GHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNP 419
L PN + + NS +YL++I+ + L LR I+ APSVQMQ + + E ++ E+N
Sbjct: 363 LLRPNLVPKMNDANSAAYLASIEKETLACLRMIRGAPSVQMQNI-VGIRLDEIEQIEEN- 420
Query: 420 DERMDQHTQ 428
ER+ + ++
Sbjct: 421 -ERLQKSSK 428
>sp|Q9FH09|HDA7_ARATH Histone deacetylase 7 OS=Arabidopsis thaliana GN=HDA7 PE=2 SV=1
Length = 409
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 265/407 (65%), Gaps = 33/407 (8%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K ++SYFY+ +G Y+G N P KP R+ +TH+L+LSY+LH+ MEI P A + +F
Sbjct: 9 KRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLADASDFEKF 68
Query: 64 HSADYVEFLHRITPDT----QHLFRQELTKYNLGEDC--PVFENLFEFCQIYAGGTIDAA 117
HS +Y+ FL +TP+T + L ++N+ D PVF NLF++C+ YAGG+I AA
Sbjct: 69 HSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSISAA 128
Query: 118 RRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGD 177
+LN Q DIAINWAGG+HH KK +ASGF Y+ND+VL ILELLK RVLYI+I HGD
Sbjct: 129 AKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYIEIGFPHGD 188
Query: 178 GVEEAFYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGERE 237
VEEAF TDR VMTVSFHK GD TGD+ + GE +
Sbjct: 189 EVEEAFKDTDR----------------------VMTVSFHKVGD-----TGDISDYGEGK 221
Query: 238 GKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSI 297
G++Y++N PLKDG+DD S LF +I + +E Y P IVLQCGADSLAGD G FNLSI
Sbjct: 222 GQYYSLNAPLKDGLDDFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSI 281
Query: 298 DGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFA 357
GH +C+++V+ FN+PL++ GGGGYT NVARCW ET I + +L N++P N+Y+KYF
Sbjct: 282 KGHGDCLQYVRSFNVPLMILGGGGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYFR 341
Query: 358 PECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVP 404
P+ L I + +NLN++ + T++ +L L + HAPSV Q+ P
Sbjct: 342 PDYKLHILPTNRQNLNTRLDIITMRETLLAQLSLVMHAPSVPFQDTP 388
>sp|Q9BY41|HDAC8_HUMAN Histone deacetylase 8 OS=Homo sapiens GN=HDAC8 PE=1 SV=2
Length = 377
Score = 302 bits (773), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/367 (40%), Positives = 223/367 (60%), Gaps = 27/367 (7%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
P R M H L+ +Y LHK+M I +P A E+A FH+ Y++ L +++ D H
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH---P 91
Query: 86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
+ +Y LG DCP E +F++ G TI AA+ L + +C +AINW+GG HHAKK EASG
Sbjct: 92 DSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASG 151
Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRLLQTCRYNLTKYLILVT 205
FCY+ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT
Sbjct: 152 FCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTS------------------ 193
Query: 206 YPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 265
KVMTVS HKF FFPGTGDV ++G +G++Y++NVP++DGI D + ++ ++++
Sbjct: 194 ----KVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLK 249
Query: 266 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 325
+V + + P A+VLQ GAD++AGD + FN++ G +C++++ ++ L L+ GGGGY
Sbjct: 250 EVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLA 309
Query: 326 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 385
N ARCWT TG++L L +EIP++E+ + P+ L I + N + I +
Sbjct: 310 NTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYI 369
Query: 386 LENLRSI 392
NL+ +
Sbjct: 370 KGNLKHV 376
>sp|Q8VH37|HDAC8_MOUSE Histone deacetylase 8 OS=Mus musculus GN=Hdac8 PE=1 SV=2
Length = 377
Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/365 (40%), Positives = 221/365 (60%), Gaps = 23/365 (6%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
P R M H L+ +Y LHK+M I +P A E+A FH+ Y++ L +++ + +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSI 94
Query: 88 TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
+Y LG DCP E +F++ GGTI AA+ L + C +AINW+GG HHAKK EASGFC
Sbjct: 95 -EYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFC 153
Query: 148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRLLQTCRYNLTKYLILVTYP 207
Y+ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT
Sbjct: 154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTS-------------------- 193
Query: 208 DVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 267
KVMTVS HKF FFPGTGD+ ++G +G++Y++NVP++DGI D + + ++++ +V
Sbjct: 194 --KVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEV 251
Query: 268 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 327
+ + P A+VLQ GAD++AGD + FN++ G +C+++V ++ L L+ GGGGY N
Sbjct: 252 YQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANT 311
Query: 328 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLE 387
ARCWT TG++L L +EIP++E+ + P+ L I + N + I +
Sbjct: 312 ARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKG 371
Query: 388 NLRSI 392
NL+ +
Sbjct: 372 NLKHV 376
>sp|B1WC68|HDAC8_RAT Histone deacetylase 8 OS=Rattus norvegicus GN=Hdac8 PE=2 SV=1
Length = 377
Score = 300 bits (768), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/365 (40%), Positives = 221/365 (60%), Gaps = 23/365 (6%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
P R M H L+ +Y LHK+M I +P A E+A FH+ Y++ L +++ + +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSI 94
Query: 88 TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
+Y LG DCP E +F++ GGTI AA+ L + C +AINW+GG HHAKK EASGFC
Sbjct: 95 -EYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFC 153
Query: 148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRLLQTCRYNLTKYLILVTYP 207
Y+ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT
Sbjct: 154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTS-------------------- 193
Query: 208 DVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 267
KVMTVS HKF FFPGTGD+ ++G +G++Y++NVP++DGI D + + ++++ +V
Sbjct: 194 --KVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEV 251
Query: 268 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 327
+ + P A+VLQ GAD++AGD + FN++ G +C+++V ++ L L+ GGGGY N
Sbjct: 252 YQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANT 311
Query: 328 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLE 387
ARCWT TG++L L +EIP++E+ + P+ L I + N + I +
Sbjct: 312 ARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKG 371
Query: 388 NLRSI 392
NL+ +
Sbjct: 372 NLKHV 376
>sp|Q7SXM0|HDAC8_DANRE Histone deacetylase 8 OS=Danio rerio GN=hdac8 PE=2 SV=1
Length = 378
Score = 296 bits (759), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/365 (42%), Positives = 223/365 (61%), Gaps = 23/365 (6%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
P+R M H L+ +Y L K M + +PH A E+A FH+ Y++ LH+I+ D + Q
Sbjct: 36 PNRASMVHSLIEAYGLLKYMRVVKPHVASIEEMAVFHTDSYLQHLHKISQDGDNDDPQS- 94
Query: 88 TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
+ LG DCPV E +F++ G T+ AA+ L + CD+AINWAGG HHAKK EASG C
Sbjct: 95 ADFGLGYDCPVVEGIFDYAAAVGGATLTAAQNLLDGKCDVAINWAGGWHHAKKDEASGSC 154
Query: 148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRLLQTCRYNLTKYLILVTYP 207
Y+ND VLGIL+L + + RVLY+D+D+HHGDGVE+AF FT
Sbjct: 155 YVNDAVLGILKLREKYDRVLYVDVDLHHGDGVEDAFSFTS-------------------- 194
Query: 208 DVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 267
KVMTVS HKF FFPGTGDV + G +G++YA+NVP +DG+ D + + F +++ +V
Sbjct: 195 --KVMTVSLHKFSPGFFPGTGDVTDTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVMQEV 252
Query: 268 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 327
+ P A+V+Q GAD++AGD + FN++ G A+C+ ++ + LP L+ GGGGY N
Sbjct: 253 KALFNPEAVVMQLGADTMAGDPMCSFNMTPVGVAKCLTYILGWELPTLLLGGGGYNLANT 312
Query: 328 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLE 387
ARCWT TG +L L +EIP++E+ + P+ SL I + N +L + +
Sbjct: 313 ARCWTYLTGTVLGQTLSSEIPDHEFFTEYGPDYSLEISPSCRPDRNESQHLERVISTIKG 372
Query: 388 NLRSI 392
NL+++
Sbjct: 373 NLKNV 377
>sp|Q0VCB2|HDAC8_BOVIN Histone deacetylase 8 OS=Bos taurus GN=HDAC8 PE=2 SV=1
Length = 377
Score = 296 bits (758), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/365 (40%), Positives = 219/365 (60%), Gaps = 23/365 (6%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
P R M H L+ +Y LHK+M I +P A E+A FH+ Y++ L +++ D +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHLQKVSEDGDDDHPDSI 94
Query: 88 TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
+Y LG DCP E +F++ G TI AA+ L + +C +AINW+GG HHAKK EASGFC
Sbjct: 95 -EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFC 153
Query: 148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRLLQTCRYNLTKYLILVTYP 207
Y+ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT
Sbjct: 154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTS-------------------- 193
Query: 208 DVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 267
KVMTVS HKF FFPGTGDV ++G +G++Y++NVP++D I D + + ++++ +V
Sbjct: 194 --KVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEV 251
Query: 268 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 327
+ P A+VLQ GAD++AGD + FN++ G +C++++ ++ L L+ GGGGY N
Sbjct: 252 YIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWELATLILGGGGYNLANT 311
Query: 328 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLE 387
ARCWT TG++L L +EIP++E+ + P+ L I + N + I +
Sbjct: 312 ARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRVQQILNYIKG 371
Query: 388 NLRSI 392
NL+ +
Sbjct: 372 NLKHV 376
>sp|B1H369|HDAC8_XENTR Histone deacetylase 8 OS=Xenopus tropicalis GN=hdac8 PE=2 SV=1
Length = 369
Score = 296 bits (757), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/365 (40%), Positives = 220/365 (60%), Gaps = 23/365 (6%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
P R M H L+ +Y L K+M + +P A E+A FH+ Y++ LH+++ + + E
Sbjct: 27 PRRASMVHSLIEAYGLLKEMRVVKPKVASMEEMAAFHTDSYLQHLHKVSEEGDN-DDPET 85
Query: 88 TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
+Y LG DCP+ E ++++ G T+ AA +L IAINW GG HHAKK EASGFC
Sbjct: 86 LEYGLGYDCPITEGIYDYAAAVGGATLTAAEQLMAGKTRIAINWPGGWHHAKKDEASGFC 145
Query: 148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRLLQTCRYNLTKYLILVTYP 207
Y+ND VLGIL+L + RVLY+D+D+HHGDGVE+AF FT
Sbjct: 146 YLNDAVLGILKLREKFDRVLYVDMDLHHGDGVEDAFSFTS-------------------- 185
Query: 208 DVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 267
KVMTVS HKF FFPGTGDV +IG +G++Y++NVPL+DGI D + ++ + ++ +V
Sbjct: 186 --KVMTVSLHKFSPGFFPGTGDVSDIGLGKGRYYSVNVPLQDGIQDEKYYQICEGVLKEV 243
Query: 268 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 327
T+ P A+VLQ GAD++AGD + FN++ G +C+++V ++ LP L+ GGGGY N
Sbjct: 244 FTTFNPEAVVLQLGADTIAGDPMCSFNMTPQGIGKCLKYVLQWQLPTLILGGGGYHLPNT 303
Query: 328 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLE 387
ARCWT T +++ L +EIP++E+ + P+ L + + N + I +
Sbjct: 304 ARCWTYLTALIVGRTLSSEIPDHEFFTEYGPDYVLEVTPSCRPDRNDSQKVQEILQSIKG 363
Query: 388 NLRSI 392
+L+ +
Sbjct: 364 HLKQV 368
>sp|Q6GPA7|HDAC8_XENLA Histone deacetylase 8 OS=Xenopus laevis GN=hdac8 PE=2 SV=1
Length = 325
Score = 279 bits (713), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/344 (40%), Positives = 209/344 (60%), Gaps = 23/344 (6%)
Query: 49 IYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQI 108
+ +P A E+A FH+ Y++ LH+++ + + E +Y LG DCP+ E ++++
Sbjct: 4 VVKPKVASMEEMAAFHTDAYLQHLHKVSEEGDN-DDPETLEYGLGYDCPITEGIYDYAAA 62
Query: 109 YAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLY 168
G T+ AA +L IA+NW GG HHAKK EASGFCY+ND VLGIL+L + RVLY
Sbjct: 63 VGGATLTAAEQLIEGKTRIAVNWPGGWHHAKKDEASGFCYLNDAVLGILKLREKFDRVLY 122
Query: 169 IDIDVHHGDGVEEAFYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTG 228
+D+D+HHGDGVE+AF FT KVMTVS HKF FFPGTG
Sbjct: 123 VDMDLHHGDGVEDAFSFTS----------------------KVMTVSLHKFSPGFFPGTG 160
Query: 229 DVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGD 288
DV +IG +G++Y+INVPL+DGI D + ++ + ++ +V T+ P A+VLQ GAD++AGD
Sbjct: 161 DVSDIGLGKGRYYSINVPLQDGIQDDKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGD 220
Query: 289 RLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIP 348
+ FN++ +G +C+++V ++ LP L+ GGGGY N ARCWT T +++ L +EIP
Sbjct: 221 PMCSFNMTPEGIGKCLKYVLQWQLPTLILGGGGYHLPNTARCWTYLTALIVGRTLSSEIP 280
Query: 349 ENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 392
++E+ + P+ L I + N + I + NL+ +
Sbjct: 281 DHEFFTEYGPDYVLEITPSCRPDRNDTQKVQEILQSIKGNLKRV 324
>sp|Q9LXN8|HDA17_ARATH Histone deacetylase 17 OS=Arabidopsis thaliana GN=HDA17 PE=2 SV=1
Length = 158
Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 127/155 (81%), Positives = 145/155 (93%)
Query: 292 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 351
F++ GHAECV+FVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI EN+
Sbjct: 2 AFSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISEND 61
Query: 352 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE 411
YIKYFAP+ SL+IP GHIENLN+KSY+S+IK+Q+LENLR IQHAPSVQMQEVPPDFYIP+
Sbjct: 62 YIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPD 121
Query: 412 FDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 446
FDEDEQNPD R+DQ ++DKQIQRDDE+++GDNDND
Sbjct: 122 FDEDEQNPDVRVDQRSRDKQIQRDDEYFDGDNDND 156
>sp|Q9M1N8|HDA10_ARATH Putative histone deacetylase 10 OS=Arabidopsis thaliana GN=HDA10
PE=3 SV=1
Length = 142
Score = 237 bits (605), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/155 (72%), Positives = 130/155 (83%), Gaps = 16/155 (10%)
Query: 292 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 351
F++ GHAEC GGYTKENVARCWTVETGILLDTELPNEIPEN+
Sbjct: 2 AFSMLFTGHAEC----------------GGYTKENVARCWTVETGILLDTELPNEIPEND 45
Query: 352 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE 411
YIKYFAP+ SL+IP GHIENLN+KSY+S+IK+Q+LENLR IQHAPSVQMQEVPPDFYIP+
Sbjct: 46 YIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPD 105
Query: 412 FDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 446
FDEDEQNPD R+DQ ++DKQIQRDDE+++GDNDND
Sbjct: 106 FDEDEQNPDVRVDQRSRDKQIQRDDEYFDGDNDND 140
>sp|Q12214|HOS1_YEAST Histone deacetylase HOS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HOS1 PE=1 SV=1
Length = 470
Score = 162 bits (409), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 140/263 (53%), Gaps = 30/263 (11%)
Query: 77 PDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLH 136
P ++ E +YNL DCP+F L +CQ+ G T++ L+ I INW GG H
Sbjct: 151 PTDTYILNSETKQYNLEGDCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRH 210
Query: 137 HAKKCEASGFCYINDLVLGILELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRLLQTCRY 195
HA K ASGFCYIND+VL I L K ++ Y+D D+HHGDGVE+AF ++
Sbjct: 211 HAFKQRASGFCYINDVVLLIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSK-------- 262
Query: 196 NLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTS 255
++ T+S H + FFPGTG + + R+ K +N+PLK G DD
Sbjct: 263 --------------QIQTISVHLYEPGFFPGTGSLSD--SRKDK-NVVNIPLKHGCDDNY 305
Query: 256 FTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLP-- 313
+ I++ ++E + P A++++CG D L GDR + L+I G + + + K + P
Sbjct: 306 LELIASKIVNPLIERHEPEALIIECGGDGLLGDRFNEWQLTIRGLSRIIINIMK-SYPRA 364
Query: 314 -LLVTGGGGYTKENVARCWTVET 335
+ + GGGGY ++R +T T
Sbjct: 365 HIFLLGGGGYNDLLMSRFYTYLT 387
>sp|P39067|ACUC_BACSU Acetoin utilization protein AcuC OS=Bacillus subtilis (strain 168)
GN=acuC PE=3 SV=1
Length = 387
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 167/370 (45%), Gaps = 41/370 (11%)
Query: 9 YFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADY 68
+ Y + F HP R+ +T+ L+ + + +I P A EL+ H+ DY
Sbjct: 6 FIYSPSYQTYMFHQEHPFNQQRVLLTYDLLKTINAFDDGDIVTPRLASEEELSLVHTDDY 65
Query: 69 VEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDI 127
++ + L +E Y LG ED PVF + E + GGT+ AA + +
Sbjct: 66 IQAVK--LAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLLVGGTLTAADWVMSGQALH 123
Query: 128 AINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDGVEEAFYFT 186
A N GGLHH + ASGFC ND + I + K Y ARVLYID D HHGDGV+ FY
Sbjct: 124 AANLGGGLHHGFRGRASGFCIYNDSAVAIQYIQKKYSARVLYIDTDAHHGDGVQFTFYDN 183
Query: 187 DRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVP 246
PDV T+S H+ G FPGTG ++E G +G Y+ N+P
Sbjct: 184 --------------------PDV--CTLSIHETGRYLFPGTGQIQEKGSGKGYGYSFNIP 221
Query: 247 LKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRF 306
L +D SF ++T S+V + P I+ Q GAD+ D L + +I+ + E R
Sbjct: 222 LDAFTEDDSFLEAYRTAASEVAAYFEPDVIISQNGADAHYYDPLTHLSATINIYEEIPRL 281
Query: 307 VKKF-----NLPLLVTGGGGYTKENV-----ARCWTVETGILLDTELPNEIPENEYIKYF 356
+ GGGGY V AR W GI E+P E+I +
Sbjct: 282 AHTLAHQYCGGKWIAVGGGGYDIWRVVPRAWARIWLEMKGIDPGHEIP-----PEWIVKW 336
Query: 357 APECSLRIPN 366
+C + +P+
Sbjct: 337 QKQCPVALPS 346
>sp|Q6GFX3|ACUC_STAAR Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MRSA252) GN=acuC PE=3 SV=1
Length = 389
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 172/401 (42%), Gaps = 32/401 (7%)
Query: 5 DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
K +Y Y + F HP RL +T L+L+ +L +I +P A EL H
Sbjct: 6 SKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIH 65
Query: 65 SADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
DYVE + + + E KY L E+ F+++ GG + A + +
Sbjct: 66 KYDYVEAIKHASHGI--ISEDEAMKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMSG 123
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDGVEEA 182
+ GGLHHA+ ASGFC ND+ + L K Y+ RVL ID D HHGDG + +
Sbjct: 124 KALNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWS 183
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY D V T S H+ G FPG+G E GE G +
Sbjct: 184 FY----------------------ADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHT 221
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+NVPL+ +D+SF FK + VV+++ P I+ G D D L N ++ E
Sbjct: 222 VNVPLEPYTEDSSFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYE 281
Query: 303 CVRFVKKF-----NLPLLVTGGGGYTKENVA-RCWTVETGILLDTELPNEIPENEYIKYF 356
FVK N +++ GGGGY V R W+ L+D + + E+I +
Sbjct: 282 IPYFVKYLADTYTNGKIIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKW 341
Query: 357 APECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPS 397
S +P + LN +Y+ K +N + H S
Sbjct: 342 KHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIAS 382
>sp|Q8NW34|ACUC_STAAW Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MW2) GN=acuC PE=3 SV=1
Length = 389
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 171/401 (42%), Gaps = 32/401 (7%)
Query: 5 DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
K +Y Y + F HP RL +T L+L+ +L +I +P A EL H
Sbjct: 6 SKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIH 65
Query: 65 SADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
DYVE + + + E KY L E+ F+++ GG + A + +
Sbjct: 66 KYDYVEAIKHASHGI--ISEDEAKKYGLNDEENSQFKHMHRHSATIVGGALTLADLIMSG 123
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDGVEEA 182
+ GGLHHA+ ASGFC ND+ + L K Y+ RVL ID D HHGDG + +
Sbjct: 124 KVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWS 183
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY D V T S H+ G FPG+G E GE G +
Sbjct: 184 FY----------------------ADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHT 221
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+NVPL+ +D SF FK + VV+++ P I+ G D D L N ++ E
Sbjct: 222 VNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYE 281
Query: 303 CVRFVKKF-----NLPLLVTGGGGYTKENVA-RCWTVETGILLDTELPNEIPENEYIKYF 356
FVK N +++ GGGGY V R W+ L+D + + E+I +
Sbjct: 282 IPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKW 341
Query: 357 APECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPS 397
S +P + LN +Y+ K +N + H S
Sbjct: 342 KHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIAS 382
>sp|Q6G8J2|ACUC_STAAS Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MSSA476) GN=acuC PE=3 SV=1
Length = 389
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 171/401 (42%), Gaps = 32/401 (7%)
Query: 5 DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
K +Y Y + F HP RL +T L+L+ +L +I +P A EL H
Sbjct: 6 SKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIH 65
Query: 65 SADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
DYVE + + + E KY L E+ F+++ GG + A + +
Sbjct: 66 KYDYVEAIKHASHGI--ISEDEAKKYGLNDEENSQFKHMHRHSATIVGGALTLADLIMSG 123
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDGVEEA 182
+ GGLHHA+ ASGFC ND+ + L K Y+ RVL ID D HHGDG + +
Sbjct: 124 KVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWS 183
Query: 183 FYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYA 242
FY D V T S H+ G FPG+G E GE G +
Sbjct: 184 FY----------------------ADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHT 221
Query: 243 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 302
+NVPL+ +D SF FK + VV+++ P I+ G D D L N ++ E
Sbjct: 222 VNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYE 281
Query: 303 CVRFVKKF-----NLPLLVTGGGGYTKENVA-RCWTVETGILLDTELPNEIPENEYIKYF 356
FVK N +++ GGGGY V R W+ L+D + + E+I +
Sbjct: 282 IPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKW 341
Query: 357 APECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPS 397
S +P + LN +Y+ K +N + H S
Sbjct: 342 KHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIAS 382
>sp|Q5HF39|ACUC_STAAC Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
COL) GN=acuC PE=3 SV=1
Length = 389
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 172/404 (42%), Gaps = 32/404 (7%)
Query: 2 RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
+ K +Y Y + F HP RL +T L+L+ +L +I +P A EL
Sbjct: 3 QHSSKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELM 62
Query: 62 QFHSADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRL 120
H DYVE + + + E KY L E+ F+++ GG + A +
Sbjct: 63 LIHKYDYVEAIKHASHGI--ISEDEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLI 120
Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDGV 179
+ + GGLHHA+ ASGFC ND+ + L K Y+ RVL ID D HHGDG
Sbjct: 121 MSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGT 180
Query: 180 EEAFYFTDRLLQTCRYNLTKYLILVTYPDVKVMTVSFHKFGDLFFPGTGDVKEIGEREGK 239
+ +FY D V T S H+ G FPG+G E GE G
Sbjct: 181 QWSFY----------------------ADNHVTTYSIHETGKFLFPGSGHYTERGEDIGY 218
Query: 240 FYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG 299
+ +NVPL+ +D SF FK + VV+++ P I+ G D D L N ++
Sbjct: 219 GHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHS 278
Query: 300 HAECVRFVKKF-----NLPLLVTGGGGYTKENVA-RCWTVETGILLDTELPNEIPENEYI 353
E FVK N +++ GGGGY V R W+ L+D + + E+I
Sbjct: 279 LYEIPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWI 338
Query: 354 KYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPS 397
+ S +P + LN +Y+ K +N + H S
Sbjct: 339 NKWKHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIAS 382
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.141 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,471,533
Number of Sequences: 539616
Number of extensions: 8385041
Number of successful extensions: 21940
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 21473
Number of HSP's gapped (non-prelim): 230
length of query: 451
length of database: 191,569,459
effective HSP length: 121
effective length of query: 330
effective length of database: 126,275,923
effective search space: 41671054590
effective search space used: 41671054590
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)