Your job contains 1 sequence.
>013040
MKSPKNSGDETRVDIQFNLQQENVPLLLQPSYARSKSLLFDELRNFRISLKWCALDHSSC
IGKFISYFAFIFLAIIVPLISSLCIKVPSSTQDCAQDGPVSFNKLVQFPESGLALVGFFI
LSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYF
STVRVSFPGGGGDPWINSIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNM
FEGRRSGSDAGFIFREHLRIRKQLSATSHRYRFFIIASLVVISISQMGALLLILGTHADK
SFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATCASVGGSDSGKG
NAGEAADHDQCRDSTSSSSDSDSSSDINIKVLSSQEPPSFQIRQALVAYLQHNNGGITLF
GFALDRGLLHTIFAFEFSLVLWILSKVVVLS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013040
(451 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2047032 - symbol:AT2G21080 "AT2G21080" species... 976 1.4e-120 2
TAIR|locus:2092424 - symbol:AT3G20300 species:3702 "Arabi... 675 2.2e-66 1
TAIR|locus:2008046 - symbol:AT1G50630 species:3702 "Arabi... 656 2.3e-64 1
TAIR|locus:2141481 - symbol:AT4G03820 "AT4G03820" species... 525 1.1e-52 2
TAIR|locus:2132045 - symbol:MRB1 "AT4G22270" species:3702... 529 6.5e-51 1
TAIR|locus:2008828 - symbol:AT1G67570 "AT1G67570" species... 446 4.0e-42 1
>TAIR|locus:2047032 [details] [associations]
symbol:AT2G21080 "AT2G21080" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005773 "vacuole" evidence=IDA] GO:GO:0005773
EMBL:CP002685 GenomeReviews:CT485783_GR InterPro:IPR021924
Pfam:PF12056 EMBL:AY139997 EMBL:BT008502 IPI:IPI00544431
RefSeq:NP_179704.2 UniGene:At.35645 UniGene:At.39609
EnsemblPlants:AT2G21080.1 GeneID:816643 KEGG:ath:AT2G21080
TAIR:At2g21080 eggNOG:NOG314577 HOGENOM:HOG000239174
InParanoid:Q8L726 OMA:FSLVMWI PhylomeDB:Q8L726
ProtClustDB:CLSN2689062 Genevestigator:Q8L726 Uniprot:Q8L726
Length = 414
Score = 976 (348.6 bits), Expect = 1.4e-120, Sum P(2) = 1.4e-120
Identities = 205/330 (62%), Positives = 239/330 (72%)
Query: 23 NVPLLLQPSYARSKSLLFDELRNFRISLKWCALDHSSCIGKFISYFAFIFLAIIVPLISS 82
N PL QPS KSL D+LRNFR+ LKWCALDHSS GK +SY F+ ++VPLIS
Sbjct: 18 NTPL--QPS----KSLPSDDLRNFRLLLKWCALDHSSSCGKAVSYMMFVVFTLLVPLISC 71
Query: 83 LCIKVPSSTQDCAQDGPVSFNKLVQFPESGLALVGFFILSRFFSKYGLRHLLFLDGLQED 142
L IK P + D SFN LVQFPESGLA++GF L FF Y L LLFLD D
Sbjct: 72 LFIKTPRNRPSAVMDAN-SFNVLVQFPESGLAVIGFLTLICFFRIYSLTKLLFLD----D 126
Query: 143 SLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYFSTVRVSFPGGGGDPWINSIVMF 202
S VR GY+RELDKA RYLA IL+PSF VEL HK I+F + VSFP + VMF
Sbjct: 127 STLVRLGYSRELDKALRYLAYILVPSFLVELVHKSIFFYSAEVSFPFIKSSCAALNFVMF 186
Query: 203 VLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNMFEGRRSGSDA-GFIFREHLRIR 261
LVL SWVYRTG++LLVC++FRLTCEL ILRF GLH +F+ R GSD + +EH+RI+
Sbjct: 187 FLVLFSWVYRTGVFLLVCILFRLTCELQILRFRGLHKLFD--RCGSDTIEDVCKEHVRIK 244
Query: 262 KQLSATSHRYRFFIIASLVVISISQMGALLLILGTHADKSFFSSGELVVCSAVELSGFFL 321
KQLSATSHRYRFFII + VVIS SQ ALLL+L + ++KSF SSG+LVVCSAV+LSGFFL
Sbjct: 245 KQLSATSHRYRFFIITAFVVISTSQFVALLLVLASKSEKSFLSSGDLVVCSAVQLSGFFL 304
Query: 322 CVLGAARITHRAQGITSVATRWHMTATCAS 351
C+LGAARITHRAQG+ +ATRWHM TCAS
Sbjct: 305 CLLGAARITHRAQGVVCIATRWHMALTCAS 334
Score = 231 (86.4 bits), Expect = 1.4e-120, Sum P(2) = 1.4e-120
Identities = 49/66 (74%), Positives = 55/66 (83%)
Query: 387 INIKVLSSQEPPSF-QIRQALVAYLQHNNGGITLFGFALDRGLLHTIFAFEFSLVLWILS 445
I I V S + SF Q RQALV YL+HNN GITL+G+ALDRGLLHT+FAFEFSLV+WILS
Sbjct: 349 IYINVSPSLDLSSFFQARQALVEYLRHNNKGITLYGYALDRGLLHTLFAFEFSLVMWILS 408
Query: 446 KVVVLS 451
KVVVLS
Sbjct: 409 KVVVLS 414
>TAIR|locus:2092424 [details] [associations]
symbol:AT3G20300 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009409 "response to
cold" evidence=RCA] [GO:0009414 "response to water deprivation"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA] EMBL:CP002686 InterPro:IPR021924 Pfam:PF12056
HOGENOM:HOG000239174 ProtClustDB:CLSN2689062 EMBL:AY074551
EMBL:AY085004 EMBL:AY139777 IPI:IPI00531575 RefSeq:NP_566658.1
UniGene:At.25147 STRING:Q8VXV8 PRIDE:Q8VXV8
EnsemblPlants:AT3G20300.1 GeneID:821574 KEGG:ath:AT3G20300
TAIR:At3g20300 InParanoid:Q8VXV8 OMA:TISFQKR PhylomeDB:Q8VXV8
Genevestigator:Q8VXV8 Uniprot:Q8VXV8
Length = 452
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 156/429 (36%), Positives = 232/429 (54%)
Query: 32 YARSKSLLFDELRNFRISLKWCALDHSSCIGKFISYFAFIFLAIIVPLISSLCIKVPSST 91
+ RS S DEL +FR L+W +D SS +S+ F+ ++VP S + +
Sbjct: 32 FTRSVSHAQDELHSFRKYLRWMCVDQSSPWTAVLSWSMFVVFTLVVPATSHFML----AC 87
Query: 92 QDCAQDGPVSFNKLVQFPESGLALVGFFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYT 151
DC ++ +VQ S A + F LSRF SKYGLR LF D L ++S VR GYT
Sbjct: 88 SDCDSHHSRPYDSVVQLSLSSFAALSFLCLSRFVSKYGLRRFLFFDKLWDESETVRLGYT 147
Query: 152 RELDKAFRYLACILLPSFFVELAHKIIYFSTVRVSFPGGGGDPWINSIVMFVLVLASWVY 211
+L+++ + L+ + P F ++KI ++++ P G + ++ V ++ L SW+Y
Sbjct: 148 NQLNRSLKILSYFVSPCFLAMSSYKIWWYASGASQIPFLG-NVILSDTVACLMELCSWLY 206
Query: 212 RTGLYLLVCVMFRLTCELHILRFEGLHNMFEGRRSGSDAGFIFREHLRIRKQLSATSHRY 271
RT + LVCV+FRL C L ILR + +F+ SD G I EHLRIR+ L SHRY
Sbjct: 207 RTTVIFLVCVLFRLICHLQILRLQDFAQVFQ---MDSDVGSILSEHLRIRRHLRIISHRY 263
Query: 272 RFFIIASLVVISISQMGALLLILGTHADKSFFSSGELVVCSAVELSGFFLCVLGAARITH 331
R FI+ SL++++ SQ +LL+ +A+ + + +GEL +CS ++ + + A++ITH
Sbjct: 264 RTFILLSLILVTGSQFYSLLITTKAYAELNIYRAGELALCSMTLVTALLILLRSASKITH 323
Query: 332 RAQGITSVATRWHMTATCAS---VGGS-----DSGKGNAGEAADHDQCRXXXXXXXXXXX 383
+AQ +T +A +WH+ AT S V G D G+ D D
Sbjct: 324 KAQAVTCLAAKWHVCATIESFETVDGETPRLVDRASGHGYYPTDDDNGESDSEDYGDEED 383
Query: 384 XXXINIKVLS-SQEPPSFQIRQALVAYLQHNNGGITLFGFALDRGLLHTIFAFEFSLVLW 442
N + + + SFQ RQALV Y ++N GIT+FGF LDR LHTIF E SLVLW
Sbjct: 384 DFDNNNLIPAYAYSTISFQKRQALVNYFENNRSGITVFGFTLDRSTLHTIFGIEMSLVLW 443
Query: 443 ILSKVVVLS 451
+L K + +S
Sbjct: 444 LLGKTIGIS 452
>TAIR|locus:2008046 [details] [associations]
symbol:AT1G50630 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] EMBL:CP002684 EMBL:AC012561
InterPro:IPR021924 Pfam:PF12056 ProtClustDB:CLSN2689062
IPI:IPI00527438 RefSeq:NP_564578.1 UniGene:At.20501 PRIDE:Q9LPT3
EnsemblPlants:AT1G50630.1 GeneID:841485 KEGG:ath:AT1G50630
TAIR:At1g50630 InParanoid:Q9LPT3 OMA:CALEMAS PhylomeDB:Q9LPT3
Genevestigator:Q9LPT3 Uniprot:Q9LPT3
Length = 453
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 154/429 (35%), Positives = 231/429 (53%)
Query: 41 DELRNFRISLKWCALDHSSCIGKFISYFAFIFLAIIVPLISSLCIKVPSSTQDCAQDGPV 100
DEL +FR L+W +DHSS +S+ FI ++VP IS + + DC
Sbjct: 35 DELHSFRKYLRWMCVDHSSPWTAILSWTMFIVFTLVVPAISHFLL----ACADCDSYHSR 90
Query: 101 SFNKLVQFPESGLALVGFFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRY 160
++ +VQ S +A V F L+RF SKYGLR LF D L ++S VRR YT +L+ +
Sbjct: 91 PYDSVVQLSLSSVATVSFLCLTRFVSKYGLRRFLFFDKLWDESETVRRNYTNQLNTSLHI 150
Query: 161 LACILLPSFFVELAHKIIYFST--VRVSFPGGGGDPWINSIVMFVLVLASWVYRTGLYLL 218
++ ++P F A+KI ++++ R+ F G ++ V ++ L SW+YRT + L
Sbjct: 151 VSYFVIPCFSAMSAYKIWWYASGGSRIPFLGNAV---LSDTVACIMELCSWLYRTTVIFL 207
Query: 219 VCVMFRLTCELHILRFEGLHNMFEGRRSGSDAGFIFREHLRIRKQLSATSHRYRFFIIAS 278
VCV+FRL C L ILR + +F+ SD G I EHLRIR+ L SHRYR FI+
Sbjct: 208 VCVLFRLICHLQILRLQDFAKLFQ---IDSDVGSILSEHLRIRRHLRIISHRYRSFILCL 264
Query: 279 LVVISISQMGALLLILGTHADKSFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGITS 338
L++++ SQ +LL+ + + + + +GEL +CS ++ + + A++ITH+AQ +T
Sbjct: 265 LILVTGSQFSSLLITTKAYTEVNIYRAGELALCSMTLVTALLILLRSASKITHKAQAVTC 324
Query: 339 VATRWHMTATCAS----VGGSDS--------GKGNAGEAADHDQCRXXXXXXXXXXXXXX 386
+A +WH+ AT S V D + N HD
Sbjct: 325 LAAKWHVCATLESFDQTVESFDQTVETPTLVARNNNDNNNVHDVVTLTESDSDEYGDEED 384
Query: 387 I--NIKVLS--SQEPPSFQIRQALVAYLQHNNGGITLFGFALDRGLLHTIFAFEFSLVLW 442
N ++ + SFQ RQALV+Y ++N+ GIT++GF LDRG LHTIF E SLVLW
Sbjct: 385 DLDNNDIIPVYAFSTMSFQKRQALVSYFENNSAGITVYGFTLDRGTLHTIFGLELSLVLW 444
Query: 443 ILSKVVVLS 451
+L K + +S
Sbjct: 445 LLGKTIGIS 453
>TAIR|locus:2141481 [details] [associations]
symbol:AT4G03820 "AT4G03820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP002687
InterPro:IPR021924 Pfam:PF12056 IPI:IPI00537610 RefSeq:NP_974507.1
UniGene:At.34108 EnsemblPlants:AT4G03820.2 GeneID:825687
KEGG:ath:AT4G03820 OMA:CFASEIK PhylomeDB:F4JGB3 Uniprot:F4JGB3
Length = 453
Score = 525 (189.9 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 129/405 (31%), Positives = 213/405 (52%)
Query: 56 DHSSCIGKFISYFAFIFLAIIVPLISSLCIKVPSSTQDCAQDGPVSFNKLVQFPESGLAL 115
D S+ I +S+ F LA+IVP+IS + DC ++ LVQ S A
Sbjct: 40 DQSNRIKTLLSWSIFFLLAVIVPMISHFVL----ICADCDFKHRRPYDGLVQLSLSIFAG 95
Query: 116 VGFFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAH 175
+ F LS + KYG+R LF D L++ S VR GY ++ ++ + LA +LPS ++ +
Sbjct: 96 ISFVSLSDWSKKYGIRRFLFFDKLKDVSDKVRIGYEAKIQRSMKLLAIFVLPSTTLQAIY 155
Query: 176 KIIYFSTVRVSFPGGGGDPWINSIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFE 235
+I ++++ P +P ++ ++ L L+SW+YRT L+++ C++++ C L +LR +
Sbjct: 156 RIWWYASGFNQIPYII-NPTLSHVLACTLQLSSWLYRTSLFIIACILYQNICHLQVLRLD 214
Query: 236 GLHNMFEGRRSGSDAGFIFREHLRIRKQLSATSHRYRFFIIASLVVISISQMGALLLILG 295
F D I EHL+IR++L SHR+R FI+ SL ++ +Q ALL +
Sbjct: 215 EFARCFASEIK--DFSSILAEHLKIRRELKIVSHRFRRFILLSLFFVTATQFMALLTTIR 272
Query: 296 THADKSFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATCASVGGS 355
+ + GEL +CS +SG F+C+ A ++TH+AQ +TS+AT+W++ CAS+
Sbjct: 273 ASVPFNIYEVGELALCSTSLVSGLFICLKSATQMTHKAQSVTSIATKWNV---CASLDTF 329
Query: 356 D---SGKG-NAGEAADHDQC--------RXXXXXXXXXXXXXXINIKVLSSQEPPSFQIR 403
D G+ H Q + + I + ++ S Q R
Sbjct: 330 DVLYDGETPKCPTTTQHSQILSRRRNVVQSSDDDEEGEGDDNDLEIHPIFARAISS-QKR 388
Query: 404 QALVAYLQHNNGGITLFGFALDRGLLHTIFAFEFSLVLWILSKVV 448
QALV YL++N GIT++GF +D+ L IF+ E +L+LW+L K +
Sbjct: 389 QALVTYLENNRAGITVYGFLVDKTWLRMIFSIELALLLWLLKKTI 433
Score = 38 (18.4 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 38 LLFDELRNFRISLKWCALDHSSCIGKFISYFAFI 71
L FD+ + L W + I IS+F I
Sbjct: 37 LWFDQSNRIKTLLSWSIFFLLAVIVPMISHFVLI 70
>TAIR|locus:2132045 [details] [associations]
symbol:MRB1 "AT4G22270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0035265 "organ growth" evidence=IMP] [GO:0051302
"regulation of cell division" evidence=IMP] GO:GO:0005886
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0035265 GO:GO:0051302
UniGene:At.1975 UniGene:At.1976 InterPro:IPR021924 Pfam:PF12056
HOGENOM:HOG000239174 ProtClustDB:CLSN2689062 EMBL:AY045956
EMBL:AY142512 IPI:IPI00548119 RefSeq:NP_567659.1
EnsemblPlants:AT4G22270.1 GeneID:828322 KEGG:ath:AT4G22270
TAIR:At4g22270 eggNOG:NOG273714 InParanoid:Q94AL2 OMA:FICLRSA
PhylomeDB:Q94AL2 Genevestigator:Q94AL2 Uniprot:Q94AL2
Length = 437
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 130/399 (32%), Positives = 210/399 (52%)
Query: 56 DHSSCIGKFISYFAFIFLAIIVPLISSLCIKVPSSTQDCAQDGPVSFNKLVQFPESGLAL 115
D S+ +S+ F L +IVPLIS + V S DC ++ +VQ S A
Sbjct: 43 DQSNFGTALLSWSVFFLLVVIVPLISHFLL-VCS---DCDFHHRRPYDVIVQLSLSIFAG 98
Query: 116 VGFFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAH 175
+ F LS + K+G+R LFLD L + S VR Y E+ ++ + L +LPS +E +
Sbjct: 99 ISFVSLSIWSRKFGMRRFLFLDKLWDVSDKVRIEYEAEIQRSLKRLMIFVLPSLTLEATY 158
Query: 176 KIIYFSTVRVSFPGGGGDPWINSIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFE 235
+I ++ + P +P ++ +V L L+SW+YR L+++VC+++++TC L LR +
Sbjct: 159 RIWWYISGFNQIPYII-NPILSHVVACTLQLSSWLYRNSLFIIVCILYKITCHLQTLRLD 217
Query: 236 GLHNMFEGRRSGSDAGFIFREHLRIRKQLSATSHRYRFFIIASLVVISISQMGALLLILG 295
F + D EH +IR+ L SHR+R FI+ SL++++ +Q ALL
Sbjct: 218 DFARCFASEIT--DVRSALGEHQKIRRNLRIVSHRFRRFILLSLILVTATQFMALLTTTR 275
Query: 296 THADKSFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATCASV--- 352
+ + GEL +CS ++G F+C+ A +ITH+AQ +TS+A +W++ AT S
Sbjct: 276 ASVAVNIYEVGELALCSLSLVTGVFICLRSATKITHKAQSVTSLAAKWNVCATVDSFDHL 335
Query: 353 -GGSDSGKGNAGEAADHDQCRXXXXXXXXXXXXXXINIKVLSSQEPP-SFQIRQALVAYL 410
G + +G + + N K+ S+Q RQALV YL
Sbjct: 336 DGETPTGSIIESQVSLRGNAIETSDDEEGEGDDDLDNTKIHPIYANTISYQKRQALVTYL 395
Query: 411 QHNNGGITLFGFALDRGLLHTIFAFEFSLVLWILSKVVV 449
++N GIT++GF +DR L+TIF E +L+LW+L+K +V
Sbjct: 396 ENNKAGITVYGFLVDRSWLNTIFGIELALLLWLLNKTIV 434
>TAIR|locus:2008828 [details] [associations]
symbol:AT1G67570 "AT1G67570" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009888 "tissue development" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0016926 "protein
desumoylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0050665 "hydrogen peroxide
biosynthetic process" evidence=RCA] EMBL:CP002684 GO:GO:0005634
IPI:IPI00542379 RefSeq:NP_564899.1 UniGene:At.24206
UniGene:At.71251 EnsemblPlants:AT1G67570.1 GeneID:843078
KEGG:ath:AT1G67570 OMA:NLQVIHF InterPro:IPR021924 Pfam:PF12056
Uniprot:F4HTN4
Length = 456
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 116/394 (29%), Positives = 194/394 (49%)
Query: 65 ISYFAFIFLAIIVPLISSLCIKVPSSTQDCAQDGPVSFNKLVQFPESGLALVGFFILSRF 124
+S+ F+ + +++P ++ L + C + SF + ++ LA V +S
Sbjct: 73 LSWIVFLSIGLVLP-VTVLEL---GHCLGCERYQYKSFELNIVVSQALLAGVSLLCVSHN 128
Query: 125 FSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYFSTVR 184
K+G+R LF+D L ++ Y +++ + R LA LP F ++ +II V
Sbjct: 129 LRKHGIRKFLFVDQLSGRMDRLKAQYIQQILNSVRLLAVWSLPCFALKGVREIIRMYYV- 187
Query: 185 VSFPGGGGDPWINSIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNMFEGR 244
P PW++ ++ ++L SW Y + ++L MF L C L ++ FE + EG
Sbjct: 188 ---PHD--QPWLSVAILLSMIL-SWTYLSTIFLAASAMFHLVCNLQVIHFEDYAKLLEGE 241
Query: 245 RSGSDAGFIFREHLRIRKQLSATSHRYRFFIIASLVVISISQMGALLLILGTHADKSFFS 304
S+ EH+R+R LS SHR+R F++ +V++ SQ L ++ +
Sbjct: 242 ---SEISLFIYEHMRLRHYLSKISHRFRIFLLLQFLVVTASQFTTLFQTTAYSGRITYIN 298
Query: 305 SGELVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATCASVGGSDSGKGNAG- 363
G+ V + V++ G LC+ A +I+HRAQ I SVA+RWH +C+S + +G
Sbjct: 299 GGDFAVSAVVQVVGIILCLHAATKISHRAQAIASVASRWHAMMSCSSTDSTQIRASPSGV 358
Query: 364 --EAADHDQCRXXXXXXXXXXXXXXINIKV-LSSQEPP-----SFQIRQALVAYLQHNNG 415
EA + +++ +++Q P S+ RQA V YLQ N G
Sbjct: 359 HLEATTNPPISFPISRSDSDVESMDHYMRMPVTNQFPSYMSMSSYHKRQAFVLYLQMNPG 418
Query: 416 GITLFGFALDRGLLHTIFAFEFSLVLWILSKVVV 449
GIT+FG+ +DR L++TIF E SLV ++L K VV
Sbjct: 419 GITIFGWTVDRHLINTIFFIELSLVTFVLGKTVV 452
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.329 0.142 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 451 437 0.00088 118 3 11 22 0.42 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 619 (66 KB)
Total size of DFA: 262 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.62u 0.16s 32.78t Elapsed: 00:00:02
Total cpu time: 32.62u 0.16s 32.78t Elapsed: 00:00:02
Start: Mon May 20 19:24:32 2013 End: Mon May 20 19:24:34 2013