BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 013040
         (451 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|C0LGK4|Y2165_ARATH Probable LRR receptor-like serine/threonine-protein kinase
           At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1
          Length = 915

 Score = 34.3 bits (77), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 4/91 (4%)

Query: 69  AFIFLAIIVPLISSLCIK-VPSSTQDCAQDGPVSFNKLVQFPESGLALVGFFILSRFFSK 127
           AFI L +I+P+I  LC++    + Q    D P    +  Q P  G      F LSR  + 
Sbjct: 458 AFILLFVILPIILVLCMRHRRRAAQRGNNDRPKPAGEASQQPPKG---AQTFDLSRLGNA 514

Query: 128 YGLRHLLFLDGLQEDSLFVRRGYTRELDKAF 158
           +    LL       D+  ++RG++  L + F
Sbjct: 515 FSYEQLLQATEEFNDANLIKRGHSGNLFRGF 545


>sp|Q94B78|GCSP2_ARATH Glycine dehydrogenase [decarboxylating] 2, mitochondrial
           OS=Arabidopsis thaliana GN=At4g33010 PE=1 SV=2
          Length = 1037

 Score = 33.1 bits (74), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 10/135 (7%)

Query: 266 ATSHRYRFFIIASLVVISISQMG--ALLLILGTHADKSFFSSGELVVCSAVELSGFFLCV 323
           ATS  Y+  +   ++ IS+   G  AL + + T             +C+A  L      +
Sbjct: 355 ATSQEYKRMMPGRIIGISVDSSGKQALRMAMQTREQHIRRDKATSNICTAQALLANMAAM 414

Query: 324 LGAARITHRAQGITSVATRWHMTATCASVGGSDSGKGNAGEAADHD----QCRDSTSSSS 379
                + H   G+ S+A R H  A   S+G +  G     E    D    +C D+  + +
Sbjct: 415 YA---VYHGPAGLKSIAQRVHGLAGIFSLGLNKLGVAEVQELPFFDTVKIKCSDA-HAIA 470

Query: 380 DSDSSSDINIKVLSS 394
           D+ S S+IN++V+ S
Sbjct: 471 DAASKSEINLRVVDS 485


>sp|Q9HA90|EFCC1_HUMAN EF-hand and coiled-coil domain-containing protein 1 OS=Homo sapiens
           GN=EFCC1 PE=2 SV=2
          Length = 598

 Score = 33.1 bits (74), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 6/69 (8%)

Query: 342 RWHMTATCASVGGSDSGKGNAGEAADHDQCRDSTSS------SSDSDSSSDINIKVLSSQ 395
           R    A CA +G    G   AG+AA     RD T        ++D DS +D   ++    
Sbjct: 76  RADFRALCAVLGLRAEGATTAGQAAGDGNSRDVTPGDAAAELATDGDSDTDEEARLALRA 135

Query: 396 EPPSFQIRQ 404
           EPP    RQ
Sbjct: 136 EPPELTFRQ 144


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.327    0.140    0.423 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 157,372,067
Number of Sequences: 539616
Number of extensions: 6346116
Number of successful extensions: 28423
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 28148
Number of HSP's gapped (non-prelim): 275
length of query: 451
length of database: 191,569,459
effective HSP length: 121
effective length of query: 330
effective length of database: 126,275,923
effective search space: 41671054590
effective search space used: 41671054590
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)