Query 013040
Match_columns 451
No_of_seqs 70 out of 72
Neff 3.7
Searched_HMMs 46136
Date Thu Mar 28 23:48:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013040.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013040hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF12056 DUF3537: Protein of u 100.0 1E-166 2E-171 1251.6 38.2 389 38-435 1-398 (398)
2 PF08395 7tm_7: 7tm Chemosenso 95.9 0.68 1.5E-05 42.5 16.3 146 251-443 218-365 (372)
3 PF02949 7tm_6: 7tm Odorant re 80.1 2.2 4.7E-05 40.0 4.0 128 206-337 127-260 (313)
4 PRK06569 F0F1 ATP synthase sub 20.2 69 0.0015 30.3 2.0 61 101-161 3-78 (155)
5 PF02633 Creatininase: Creatin 19.6 2.6E+02 0.0056 27.0 5.8 49 93-143 65-113 (237)
6 PF08883 DOPA_dioxygen: Dopa 4 18.1 64 0.0014 28.6 1.2 19 402-420 56-74 (104)
7 KOG3222 Inosine triphosphate p 17.3 68 0.0015 31.5 1.3 13 265-277 171-183 (195)
8 COG4856 Uncharacterized protei 15.3 1.1E+02 0.0023 33.2 2.2 22 208-229 8-29 (403)
9 PF06734 UL97: UL97; InterPro 15.3 1.7E+02 0.0037 28.6 3.4 35 108-155 91-125 (184)
10 PRK10929 putative mechanosensi 14.7 7.9E+02 0.017 30.1 9.2 92 104-212 553-648 (1109)
No 1
>PF12056 DUF3537: Protein of unknown function (DUF3537); InterPro: IPR021924 This family of transmembrane proteins are functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 427 to 453 amino acids in length.
Probab=100.00 E-value=1.1e-166 Score=1251.62 Aligned_cols=389 Identities=51% Similarity=0.848 Sum_probs=355.8
Q ss_pred chHHHHHHHHhhhhhhcccCCCcchhHHHHHHHHHHHHHHhhhhhhhccCCCCCCcccCCCCcccccccccchhhHHHHH
Q 013040 38 LLFDELRNFRISLKWCALDHSSCIGKFISYFAFIFLAIIVPLISSLCIKVPSSTQDCAQDGPVSFNKLVQFPESGLALVG 117 (451)
Q Consensus 38 ~~~deLr~fr~~L~w~~ldqSs~~~~~~Sw~~F~~lav~vP~~~~~~~~~~~c~~~cd~~~~~~f~~~Vq~s~s~lAavS 117 (451)
|++||||+||++|+|||+||||++++++||++|+++|++||++++++++|| +||++|++|||++||+|||++|+||
T Consensus 1 h~~deL~~fr~~L~w~~~dqSs~~~~~~Sw~~F~ll~v~vP~~~~~~~~c~----~cd~~~~~~f~~~Vq~s~s~lAavs 76 (398)
T PF12056_consen 1 HARDELRSFRSFLRWCGLDQSSPLSAALSWSVFLLLAVAVPAASHFLLSCP----SCDKYHIRPFEKLVQLSQSALAAVS 76 (398)
T ss_pred CchhHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCC----CchhcCCCchhHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999777 7899999999999999999999999
Q ss_pred HHHHhhhhhhcccceeecccccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhheeEEEeecccCCCCCCCCcch
Q 013040 118 FFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIYFSTVRVSFPGGGGDPWIN 197 (451)
Q Consensus 118 f~cLS~~~rkyGLRr~LflD~l~~~s~~vr~gY~~~l~~sfrlLa~~vLPcf~~e~a~ki~wy~~v~~~iP~~~~~~~~~ 197 (451)
|+|||+|+||||||||||+||++|||++||+||++||++|||+|++|+||||++|+|||||||++|++++||++|++||+
T Consensus 77 f~cLS~~~rkyGlRr~LflD~l~~~s~~vr~gY~~~l~~sfrlLa~~vLPcf~~e~~~ki~~~~~~~~~~P~~~~~~~~~ 156 (398)
T PF12056_consen 77 FLCLSHFLRKYGLRRFLFLDKLRDDSEEVRRGYTRQLNRSFRLLACWVLPCFLVEAAYKIWWYSSVAVQIPYIGHPSWWN 156 (398)
T ss_pred HHHHHHHhHhcCceeeeeecccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEeeccccCCccCCccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeeccchhhhhcccCCCCCHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Q 013040 198 SIVMFVLVLASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNMFEGRRSGSDAGFIFREHLRIRKQLSATSHRYRFFIIA 277 (451)
Q Consensus 198 s~v~~~l~l~SW~YrT~ifll~CVLFrLiC~LQILR~e~~~klfe~~~~~sDv~~il~EH~RIR~qL~~ISHRfR~Fil~ 277 (451)
+ ++|+++++||+|||+|||++||||||+|||||||||||+|+||+ ++||++||+||+|||+||+|||||||+|||+
T Consensus 157 s-va~~l~l~SW~YrT~ifl~~CvLFrLiC~LQiLr~~~~~klfe~---~sdv~~il~EH~RiR~qL~~ISHRfR~Fil~ 232 (398)
T PF12056_consen 157 S-VACLLELASWLYRTTIFLLVCVLFRLICNLQILRFEGYAKLFER---DSDVGVILEEHLRIRRQLSKISHRFRIFILL 232 (398)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheehHhHHHHHcc---CCCHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 9 99999999999999999999999999999999999999999988 6999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCccceeccCceeeehhhHhHHHHHhhhhhhHHHhhhhhhhhHhhhhhhheeecccCCCC-
Q 013040 278 SLVVISISQMGALLLILGTHADKSFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGITSVATRWHMTATCASVGGSD- 356 (451)
Q Consensus 278 ~l~~VTaSQf~sLl~~t~~~~~inf~~~GdLavcS~vqv~Gl~icL~~AaKITHRAQ~I~siAskWHa~aT~~s~~~~~- 356 (451)
||++||+|||++||+||++++++||+|+|||||||+|||+|++||||||||||||||+|||+||||||+|||+|+|.++
T Consensus 233 ~l~~VTaSQf~sLl~~t~~~~~inf~~~GdlavcS~vqv~Gl~iCL~~AaKITHrAQ~I~siAskWHa~aTc~s~d~~~~ 312 (398)
T PF12056_consen 233 SLLLVTASQFVSLLQTTRSKGDINFFNAGDLAVCSVVQVSGLFICLHGAAKITHRAQAITSIASKWHACATCSSFDSDQG 312 (398)
T ss_pred HHHHHHHHHHHHHHHHhccccceeEeeccceeeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheecccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986332
Q ss_pred CCCCCC-CCccCCCC-CCCCCCCCCC-----CCCCcccccccCCCC-CCchHHhHHHHHHHhhcCCCceEEEEEEeehhh
Q 013040 357 SGKGNA-GEAADHDQ-CRDSTSSSSD-----SDSSSDINIKVLSSQ-EPPSFQIRQALVAYLQHNNGGITLFGFALDRGL 428 (451)
Q Consensus 357 ~~~~~~-~~~~~~~~-~~~~~~~~sd-----~e~~~~~~~~~~~~~-~~~SfqkRQAlVtYLq~N~~GITvfGf~lDR~~ 428 (451)
++|++. .+.+.++. ....++|+|| +||+.++ ++..+.+ +++||||||||||||||||||||||||+|||||
T Consensus 313 ~~p~~~~~~~~~~~~~~~~~~~~~sd~es~d~~~~~~~-~~~~~~~~~~~SfqKRQALVtYLq~N~aGITvfGf~lDR~~ 391 (398)
T PF12056_consen 313 ETPTSDSLSAAANPFPSAGINSSSSDDESGDEEDDLDN-TKQLPSYADMISFQKRQALVTYLQNNRAGITVFGFVLDRGL 391 (398)
T ss_pred cCCCCCccccccccccCCCCCCCccchhhcccCCCCCc-cccccccchhHHHHHHHHHHHHHhcCCCCeEEEEEEeehHH
Confidence 344432 11111111 1112222222 2333333 4554544 599999999999999999999999999999999
Q ss_pred HHHHHHH
Q 013040 429 LHTIFAF 435 (451)
Q Consensus 429 LhTIF~~ 435 (451)
||||||+
T Consensus 392 LhTIF~i 398 (398)
T PF12056_consen 392 LHTIFMI 398 (398)
T ss_pred HHHHhhC
Confidence 9999985
No 2
>PF08395 7tm_7: 7tm Chemosensory receptor; InterPro: IPR013604 This family includes a number of gustatory and odorant receptors mainly from insect species such as Anopheles gambiae (African malaria mosquito) and Drosophila melanogaster (Fruit fly). They are classified as G-protein-coupled receptors (GPCRs), or seven-transmembrane receptors. They show high sequence divergence, consistent with an ancient origin for the family [, ]. ; GO: 0050909 sensory perception of taste, 0016021 integral to membrane
Probab=95.89 E-value=0.68 Score=42.54 Aligned_cols=146 Identities=18% Similarity=0.142 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhccCC-ccceeccCceeeehhhHhHHHHHhhhhhhHH
Q 013040 251 GFIFREHLRIRKQLSATSHRYRFFIIASLVVISISQMGALLLILGTHA-DKSFFSSGELVVCSAVELSGFFLCVLGAARI 329 (451)
Q Consensus 251 ~~il~EH~RIR~qL~~ISHRfR~Fil~~l~~VTaSQf~sLl~~t~~~~-~inf~~~GdLavcS~vqv~Gl~icL~~AaKI 329 (451)
..+.+-|.+|.+--..+..=|...+++.+...-..-...++....... ..+......-.+.....+..+++-...+.++
T Consensus 218 ~~l~~~~~~L~~~~~~in~~fg~~ll~~~~~~f~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 297 (372)
T PF08395_consen 218 RKLRRLHDELCDLVESINRIFGLQLLLILLSSFIFIVFNLYYIYYNISQNSSLFMLLINILWLFIYIIFLVLLIYVCDRI 297 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeehhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666777777777777777766665444333333333331111111 2222333333445566667777777888899
Q ss_pred HhhhhhhhhHhhhhhhheeecccCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCcccccccCCCCCCchHHhHHHHHHH
Q 013040 330 THRAQGITSVATRWHMTATCASVGGSDSGKGNAGEAADHDQCRDSTSSSSDSDSSSDINIKVLSSQEPPSFQIRQALVAY 409 (451)
Q Consensus 330 THRAQ~I~siAskWHa~aT~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~sd~e~~~~~~~~~~~~~~~~SfqkRQAlVtY 409 (451)
+..++++..+.. -. ... .. + . .-.++-+.+...
T Consensus 298 ~~e~~~~~~~l~---~~---~~~---------------------~~--~-----~-------------~~~~~l~~f~~q 330 (372)
T PF08395_consen 298 SQEANKTGSILH---KL---NNF---------------------RN--D-----S-------------ELQRELELFSLQ 330 (372)
T ss_pred hhhHhHHHHHHH---Hc---Ccc---------------------cc--h-----h-------------HHhhHHHHHHHH
Confidence 998888888773 22 110 00 0 0 012235677889
Q ss_pred hhcCCCceEEEEEE-eehhhHHHHHHHHHHHHHHh
Q 013040 410 LQHNNGGITLFGFA-LDRGLLHTIFAFEFSLVLWI 443 (451)
Q Consensus 410 Lq~N~~GITvfGf~-lDR~~LhTIF~~E~SLVLwi 443 (451)
++|+|-.+|.+||. +|++++.+++|.-.+-+.-+
T Consensus 331 l~~~~~~~ta~g~f~ld~~ll~~~~~~i~TYliIL 365 (372)
T PF08395_consen 331 LQHQPLKFTACGFFDLDRSLLFSIIGAITTYLIIL 365 (372)
T ss_pred HHhcCCceEEeeEEEECHHHHHHHHHHHHHHHHhh
Confidence 99999999999985 99999999999877766544
No 3
>PF02949 7tm_6: 7tm Odorant receptor; InterPro: IPR004117 All known members of this group are seven-transmembrane proteins that are candidate odorant receptors in Drosophila.; GO: 0004984 olfactory receptor activity, 0005549 odorant binding, 0007608 sensory perception of smell, 0016020 membrane
Probab=80.09 E-value=2.2 Score=39.96 Aligned_cols=128 Identities=14% Similarity=0.226 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhheeeeccchhhhhcccCC-----CCCHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 013040 206 LASWVYRTGLYLLVCVMFRLTCELHILRFEGLHNMFEGRRS-----GSDAGFIFREHLRIRKQLSATSHRYRFFIIASLV 280 (451)
Q Consensus 206 l~SW~YrT~ifll~CVLFrLiC~LQILR~e~~~klfe~~~~-----~sDv~~il~EH~RIR~qL~~ISHRfR~Fil~~l~ 280 (451)
.+.+.+-..=.+..+.+.++..++++|+- .+.++.+.++. +.....+++.|.++-+..+++..-|+..++..++
T Consensus 127 ~~~~~~~~~d~l~~~~~~~~~~q~~iL~~-~l~~l~~~~~~~~~~~~~~L~~~I~~H~~ll~~~~~l~~~~~~~~l~~~~ 205 (313)
T PF02949_consen 127 ICVFIIIGFDSLFIILLLHICGQFDILQR-RLENLFEDNSEEDEERREELKECIKRHQRLLRFVEKLEDIFSPIFLVQFL 205 (313)
T ss_pred chhhhhhcchHHHHHHHHHHHHHHHHHHH-HHHHhhhcccchhHHHHHHHHHHHhhhcchhhhhhhhhhccchhhhhhhh
Confidence 33444444445566667777778887753 12222322111 1347789999999999999999999999888887
Q ss_pred HHHHHHHHHHHHHhccCC-ccceeccCceeeehhhHhHHHHHhhhhhhHHHhhhhhhh
Q 013040 281 VISISQMGALLLILGTHA-DKSFFSSGELVVCSAVELSGFFLCVLGAARITHRAQGIT 337 (451)
Q Consensus 281 ~VTaSQf~sLl~~t~~~~-~inf~~~GdLavcS~vqv~Gl~icL~~AaKITHRAQ~I~ 337 (451)
..+..=-..++..+.... ..+++.-+-+.++++.|+ ++.|. .+.+++....++.
T Consensus 206 ~~~~~ic~~~f~i~~~~~~~~~~~~~~~~~~~~~~~l--f~~c~-~g~~l~~~s~~i~ 260 (313)
T PF02949_consen 206 SSSLVICFLLFQISTSSSSSFNIFFYFMYLVAMLLQL--FIYCY-LGQELIDESEEIA 260 (313)
T ss_pred hhHHHHhhcccccccccccccccchhhhHHHHHHHHH--HHHHh-hHHHHHHHHhhhh
Confidence 666655555555554433 555555555556666666 45565 3466666665553
No 4
>PRK06569 F0F1 ATP synthase subunit B'; Validated
Probab=20.16 E-value=69 Score=30.28 Aligned_cols=61 Identities=20% Similarity=0.199 Sum_probs=45.5
Q ss_pred ccccccccchhhHHHHHHHHHhhhhhhcccceeecc---------------cccccchhHHHhhHHHHHHHHHHHH
Q 013040 101 SFNKLVQFPESGLALVGFFILSRFFSKYGLRHLLFL---------------DGLQEDSLFVRRGYTRELDKAFRYL 161 (451)
Q Consensus 101 ~f~~~Vq~s~s~lAavSf~cLS~~~rkyGLRr~Lfl---------------D~l~~~s~~vr~gY~~~l~~sfrlL 161 (451)
|||...-.++-..-+|+|+-|.-+++|+...++.=+ ++.+.+.+..+..|.++|+++=.-.
T Consensus 3 Qfd~~~~~sqifw~iI~FlILy~ll~kf~~ppI~~iLe~R~~~I~~~L~~Ae~~k~eAe~l~a~ye~~L~~Ar~eA 78 (155)
T PRK06569 3 QFDIATYYSQIFWLIVTFGLLYIFVYKFITPKAEEIFNNRQTNIQDNITQADTLTIEVEKLNKYYNEEIDKTNTEI 78 (155)
T ss_pred CCchhhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466666677888889999999999999877666544 3455666777777999998775443
No 5
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=19.62 E-value=2.6e+02 Score=26.98 Aligned_cols=49 Identities=14% Similarity=0.337 Sum_probs=34.1
Q ss_pred cccCCCCcccccccccchhhHHHHHHHHHhhhhhhcccceeecccccccch
Q 013040 93 DCAQDGPVSFNKLVQFPESGLALVGFFILSRFFSKYGLRHLLFLDGLQEDS 143 (451)
Q Consensus 93 ~cd~~~~~~f~~~Vq~s~s~lAavSf~cLS~~~rkyGLRr~LflD~l~~~s 143 (451)
+|...|. .|-+-|.++...+.++ +.-+-+.+.+.|.||++++....+..
T Consensus 65 G~s~~h~-~fpGTisl~~~t~~~~-l~di~~sl~~~Gf~~ivivngHgGN~ 113 (237)
T PF02633_consen 65 GCSPHHM-GFPGTISLSPETLIAL-LRDILRSLARHGFRRIVIVNGHGGNI 113 (237)
T ss_dssp BB-GCCT-TSTT-BBB-HHHHHHH-HHHHHHHHHHHT--EEEEEESSTTHH
T ss_pred ccCcccC-CCCCeEEeCHHHHHHH-HHHHHHHHHHcCCCEEEEEECCHhHH
Confidence 4444554 6889999998888887 56666678889999999999888743
No 6
>PF08883 DOPA_dioxygen: Dopa 4,5-dioxygenase family; InterPro: IPR014980 This family of proteins is related to P87064 from SWISSPROT a DOPA 4,5-dioxygenase that is involved in synthesis of betalain. DOPA-dioxygenase is the key enzyme involved in betalain biosynthesis. It converts 3,4-dihydroxyphenylalanine to betalamic acid, a yellow chromophore. ; PDB: 2NYH_A 2P8I_C.
Probab=18.07 E-value=64 Score=28.64 Aligned_cols=19 Identities=26% Similarity=0.541 Sum_probs=13.8
Q ss_pred hHHHHHHHhhcCCCceEEE
Q 013040 402 IRQALVAYLQHNNGGITLF 420 (451)
Q Consensus 402 kRQAlVtYLq~N~~GITvf 420 (451)
.-.++|.||+.||||.||+
T Consensus 56 ~f~~~v~Wl~~nrg~LsVL 74 (104)
T PF08883_consen 56 QFAEVVPWLMLNRGGLSVL 74 (104)
T ss_dssp HHHHHHHHHHHH-TT--EE
T ss_pred HHHHHHHHHHHhCCCceEE
Confidence 3568999999999999997
No 7
>KOG3222 consensus Inosine triphosphate pyrophosphatase [Nucleotide transport and metabolism]
Probab=17.26 E-value=68 Score=31.51 Aligned_cols=13 Identities=46% Similarity=0.608 Sum_probs=10.6
Q ss_pred hhhhhhhHHHHHH
Q 013040 265 SATSHRYRFFIIA 277 (451)
Q Consensus 265 ~~ISHRfR~Fil~ 277 (451)
.+||||||.+-.+
T Consensus 171 N~iSHRy~A~~kl 183 (195)
T KOG3222|consen 171 NAISHRYRALAKL 183 (195)
T ss_pred hhhhHHHHHHHHH
Confidence 5799999987654
No 8
>COG4856 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=15.30 E-value=1.1e+02 Score=33.17 Aligned_cols=22 Identities=14% Similarity=0.421 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh
Q 013040 208 SWVYRTGLYLLVCVMFRLTCEL 229 (451)
Q Consensus 208 SW~YrT~ifll~CVLFrLiC~L 229 (451)
=|+||..-||++|+||=-+-+-
T Consensus 8 ~W~irIiaff~A~~Lfl~vn~~ 29 (403)
T COG4856 8 PWLIRIIAFFFAILLFLYVNNN 29 (403)
T ss_pred cHhHHHHHHHHHHHhheeeccc
Confidence 3889998899999998655544
No 9
>PF06734 UL97: UL97; InterPro: IPR010615 The gene product form the gene UL97 is a serine/threonine kinase. Although it can phosphorylates the antiviral drug ganciclovir [], its biological function is the phosphorylation of its natural viral and cellular protein substrates which affect viral replication at many levels. The kinase phosphorylates eukaryotic elongation factor 1delta, the carboxyl terminal domain of the large subunit of RNA polymerase II, the retinoblastoma tumour suppressor and lamins A and C performing a similar function to the cdc2/cyclin-dependent kinase 1. The activity of UL97 appear to stimulate the cell cycle to support viral DNA synthesis, enhance the expression of viral genes, promote virion morphogenesis and facilitate the egress of mature capsids from the nucleus []. ; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0016032 viral reproduction
Probab=15.27 E-value=1.7e+02 Score=28.61 Aligned_cols=35 Identities=34% Similarity=0.385 Sum_probs=29.5
Q ss_pred cchhhHHHHHHHHHhhhhhhcccceeecccccccchhHHHhhHHHHHH
Q 013040 108 FPESGLALVGFFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELD 155 (451)
Q Consensus 108 ~s~s~lAavSf~cLS~~~rkyGLRr~LflD~l~~~s~~vr~gY~~~l~ 155 (451)
+-+.+++-|..+||-|.+-|.|++ +||++|+..|=
T Consensus 91 ~dLcALg~V~~fCl~R~LD~RG~~-------------~Vr~~~E~~LF 125 (184)
T PF06734_consen 91 ADLCALGNVVLFCLVRLLDRRGLR-------------EVRKYYENLLF 125 (184)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccH-------------HHHhhHHHHHH
Confidence 457889999999999999988875 69999998663
No 10
>PRK10929 putative mechanosensitive channel protein; Provisional
Probab=14.75 E-value=7.9e+02 Score=30.13 Aligned_cols=92 Identities=15% Similarity=0.088 Sum_probs=50.7
Q ss_pred cccccchhhHHHHH----HHHHhhhhhhcccceeecccccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhheeE
Q 013040 104 KLVQFPESGLALVG----FFILSRFFSKYGLRHLLFLDGLQEDSLFVRRGYTRELDKAFRYLACILLPSFFVELAHKIIY 179 (451)
Q Consensus 104 ~~Vq~s~s~lAavS----f~cLS~~~rkyGLRr~LflD~l~~~s~~vr~gY~~~l~~sfrlLa~~vLPcf~~e~a~ki~w 179 (451)
..+.++....|..+ |+...+++|+-|+ +.-..+-..+.|++ ..+-+|.+.++++|..++-..-+..
T Consensus 553 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~Gl----~~~HF~w~~~~v~~-----~~~~~~~~~~~~~pl~~~~~~~~~~- 622 (1109)
T PRK10929 553 LAVAIGDGVTATVPLLWVFMICATFARPNGL----FIAHFGWPRERVAR-----AMRYYLLSIGLIVPLIMALITFDNL- 622 (1109)
T ss_pred hHhhccHHHHHHHHHHHHHHHHHHHcCCCCe----eHHhcCCCHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhhC-
Confidence 33444444444333 3333445566664 44444555555554 3456788899999998865443211
Q ss_pred EEeecccCCCCCCCCcchhHHHHHHHHHHHHHH
Q 013040 180 FSTVRVSFPGGGGDPWINSIVMFVLVLASWVYR 212 (451)
Q Consensus 180 y~~v~~~iP~~~~~~~~~s~v~~~l~l~SW~Yr 212 (451)
.....++.+...+.++.+.+++|+|.
T Consensus 623 -------~~~~~~~~lgr~~~i~~~~~l~~~~~ 648 (1109)
T PRK10929 623 -------NDREFSGTLGRLCFILLCGALSLVTL 648 (1109)
T ss_pred -------chhhhhccHHHHHHHHHHHHHHHHHH
Confidence 01233455556656666677777775
Done!