Your job contains 1 sequence.
>013048
MHGRPRKPLKPEDAAASAAKAEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYT
AWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHS
SIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHN
RSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVRVDSP
QLVSSWPTPGSDLILLGDRCLDGCASSPFTRFHLDSRTFPLVLYFNQAVEGVNSSTITVD
SELNTNKDLVWKPLSSCNSKAAQVWVTQLNLPDGNTHSSKVFPVEVSLGHSQGIISSSGF
HYSNPFCFAFRVSLQFVETQPVEALGKEIISWRDESFHNYNAHSQDSSPISSLYQLSIKN
DNELTDFEWRAATIAKEIDHFRELLSLINW
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013048
(450 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2121860 - symbol:RGTA1 "RAB geranylgeranyl tra... 1243 1.4e-126 1
TAIR|locus:2153015 - symbol:RGTA2 "RAB geranylgeranyl tra... 949 2.0e-95 1
ZFIN|ZDB-GENE-060929-1042 - symbol:rabggta "Rab geranylge... 316 8.7e-41 3
UNIPROTKB|F1PIE1 - symbol:RABGGTA "Uncharacterized protei... 406 3.6e-40 2
RGD|621697 - symbol:Rabggta "Rab geranylgeranyltransferas... 426 5.3e-40 1
MGI|MGI:1860443 - symbol:Rabggta "Rab geranylgeranyl tran... 418 3.7e-39 1
UNIPROTKB|F1MGN1 - symbol:RABGGTA "Geranylgeranyl transfe... 406 7.0e-38 1
UNIPROTKB|Q5EA80 - symbol:RABGGTA "Geranylgeranyl transfe... 406 7.0e-38 1
UNIPROTKB|H0YLH3 - symbol:RABGGTA "Geranylgeranyl transfe... 405 8.9e-38 1
UNIPROTKB|Q92696 - symbol:RABGGTA "Geranylgeranyl transfe... 405 8.9e-38 1
UNIPROTKB|A5A779 - symbol:RABGGTA "Geranylgeranyl transfe... 399 3.9e-37 1
DICTYBASE|DDB_G0269570 - symbol:rabggta "protein geranylg... 371 3.6e-34 1
POMBASE|SPCC1620.05 - symbol:SPCC1620.05 "Rab geranylgera... 354 2.3e-32 1
ASPGD|ASPL0000044135 - symbol:AN1981 species:162425 "Emer... 311 8.2e-28 1
SGD|S000003568 - symbol:BET4 "Alpha subunit of Type II ge... 309 1.3e-27 1
WB|WBGene00019778 - symbol:M57.2 species:6239 "Caenorhabd... 313 9.3e-27 1
FB|FBgn0037293 - symbol:CG12007 species:7227 "Drosophila ... 297 2.2e-24 1
POMBASE|SPAPB1A10.04c - symbol:cwp1 "geranylgeranyltransf... 210 1.6e-15 1
TAIR|locus:2081177 - symbol:FTA "farnesyltransferase A" s... 209 9.6e-15 1
SGD|S000001502 - symbol:RAM2 "Alpha subunit of farnesyltr... 207 1.3e-14 1
FB|FBgn0031633 - symbol:CG2976 species:7227 "Drosophila m... 191 1.6e-12 1
UNIPROTKB|E9PQP6 - symbol:FNTA "Protein farnesyltransfera... 180 1.7e-12 1
UNIPROTKB|F1NJX8 - symbol:FNTA "Uncharacterized protein" ... 189 3.2e-12 1
MGI|MGI:104683 - symbol:Fnta "farnesyltransferase, CAAX b... 188 5.6e-12 1
UNIPROTKB|H0YE66 - symbol:H0YE66 "Uncharacterized protein... 167 9.0e-12 1
RGD|2625 - symbol:Fnta "farnesyltransferase, CAAX box, al... 186 9.4e-12 1
UNIPROTKB|Q04631 - symbol:Fnta "Protein farnesyltransfera... 186 9.4e-12 1
UNIPROTKB|E2RHY8 - symbol:FNTA "Uncharacterized protein" ... 183 2.1e-11 1
ZFIN|ZDB-GENE-030131-866 - symbol:fnta "farnesyltransfera... 180 4.5e-11 1
UNIPROTKB|P49354 - symbol:FNTA "Protein farnesyltransfera... 180 4.7e-11 1
UNIPROTKB|F1N081 - symbol:FNTA "Protein farnesyltransfera... 179 5.8e-11 1
UNIPROTKB|P29702 - symbol:FNTA "Protein farnesyltransfera... 179 5.8e-11 1
WB|WBGene00019823 - symbol:fnta-1 species:6239 "Caenorhab... 175 1.1e-10 1
UNIPROTKB|O44501 - symbol:fnta-1 "Protein FNTA-1" species... 175 1.1e-10 1
DICTYBASE|DDB_G0283053 - symbol:fntA "protein prenyltrans... 168 6.6e-10 1
UNIPROTKB|H0YCW1 - symbol:FNTA "Protein farnesyltransfera... 139 7.9e-08 1
CGD|CAL0005317 - symbol:RAM2 species:5476 "Candida albica... 149 8.5e-08 1
UNIPROTKB|Q5APE8 - symbol:RAM2 "Putative uncharacterized ... 149 8.5e-08 1
GENEDB_PFALCIPARUM|PF14_0403 - symbol:PF14_0403 "protein ... 155 1.4e-07 2
UNIPROTKB|Q8IL46 - symbol:PF14_0403 "Protein prenyltransf... 155 1.4e-07 2
UNIPROTKB|G4MNG3 - symbol:MGG_16220 "Uncharacterized prot... 144 8.9e-07 1
DICTYBASE|DDB_G0287077 - symbol:DDB_G0287077 "protein pre... 110 2.2e-05 2
FB|FBgn0027296 - symbol:l(1)G0144 "lethal (1) G0144" spec... 119 0.00034 1
UNIPROTKB|E9PPM9 - symbol:FNTA "Protein farnesyltransfera... 95 0.00057 1
>TAIR|locus:2121860 [details] [associations]
symbol:RGTA1 "RAB geranylgeranyl transferase alpha
subunit 1" species:3702 "Arabidopsis thaliana" [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR001611
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 PROSITE:PS51450
GO:GO:0005829 GO:GO:0046686 EMBL:CP002687 GO:GO:0008318
GO:GO:0018342 KO:K14050 HSSP:Q08602 EMBL:AY072209 EMBL:AY117358
IPI:IPI00528243 RefSeq:NP_001078443.1 RefSeq:NP_194180.2
UniGene:At.28080 ProteinModelPortal:Q8VYB7 SMR:Q8VYB7 PRIDE:Q8VYB7
EnsemblPlants:AT4G24490.1 EnsemblPlants:AT4G24490.2 GeneID:828551
KEGG:ath:AT4G24490 TAIR:At4g24490 HOGENOM:HOG000030513
InParanoid:Q8VYB7 OMA:KLAFQHN PhylomeDB:Q8VYB7
ProtClustDB:CLSN2686399 Genevestigator:Q8VYB7 Uniprot:Q8VYB7
Length = 678
Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 243/441 (55%), Positives = 312/441 (70%)
Query: 1 MHGRPRKPLKPEDXXXXXXXXEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYT 60
MHGRPR KPE+ +LR LQSQF+ NHH+ IY+ EA+ELSTKLLE NPE YT
Sbjct: 1 MHGRPRNASKPEEEAASAAKAVQLRSLQSQFMTNHHDKIYTNEAIELSTKLLEINPEAYT 60
Query: 61 AWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHS 120
AWNYRKLAV+ +L + DP+ + +ILDEELRVVESALRQNFKSYGAWHHRKW+LSKGHS
Sbjct: 61 AWNYRKLAVEDRLARIEPDPNLVSAILDEELRVVESALRQNFKSYGAWHHRKWVLSKGHS 120
Query: 121 SIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHX 180
S+ NELRLL+KFQK DSRNFHAWNYRRFV NRSE+DEL+YT+DMI NNFSNYSAWH
Sbjct: 121 SVGNELRLLEKFQKLDSRNFHAWNYRRFVVELTNRSEQDELQYTDDMINNNFSNYSAWHN 180
Query: 181 XXXXXXXXXXXXVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVRVDSP 240
+GF+ K+ P+EY+FVH AIFT+PDDQSGWFYHLWLLDQT+ V++P
Sbjct: 181 RSVLLSSLLAQNADGFMPNIKI-PEEYDFVHSAIFTEPDDQSGWFYHLWLLDQTLNVETP 239
Query: 241 QLVSSWPTPGSDLILLGDRCLDGCASSPFTRFHLDSRTFPLVLYFNQAVEGVNSSTITVD 300
L SSWP+ GS +IL G CL G +SS FT F +S +FPL+LYF+QAV GV+SST+T+D
Sbjct: 240 LLTSSWPSHGSSIILSGAGCLSG-SSSMFTTFCSESGSFPLILYFDQAVGGVSSSTVTID 298
Query: 301 SELNTNKDLVWKPLSSCNSKAAQVWVTQLNLPDGNTHSSKVFPVEVSLGHSQGIISSSGF 360
SEL N+ LVW+P+ + NS+ + VWV +L + KV ++ +G+S GI+SS G+
Sbjct: 299 SELKGNEGLVWEPIPNKNSQVSCVWVARLKYVSSDPCEYKV---KIRVGNSPGIVSSRGY 355
Query: 361 HYSNPFCFAFRVSLQFVETQPVEALGKEIISWRDESFHNYNAHSQDSSPISSLYQLSIKN 420
+++ P+ F F + +T VE + I+SW D F ++A S+D + + +L +L
Sbjct: 356 NFNAPYEFVFTAHVH--DT--VEDSQEGIVSWTD-GFDIWDAKSKDLNSLVTLDRL---- 406
Query: 421 DNELTDFEWRAATIAKEIDHF 441
N DF+WR I E++ F
Sbjct: 407 -NAEMDFKWRQEAIDSEVECF 426
>TAIR|locus:2153015 [details] [associations]
symbol:RGTA2 "RAB geranylgeranyl transferase alpha
subunit 2" species:3702 "Arabidopsis thaliana" [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 PROSITE:PS51450 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB016871 eggNOG:COG5536
GO:GO:0008318 GO:GO:0018342 HSSP:Q08602 HOGENOM:HOG000030513
ProtClustDB:CLSN2686399 IPI:IPI00539643 RefSeq:NP_198997.1
UniGene:At.55309 ProteinModelPortal:Q9FJ32 SMR:Q9FJ32 PaxDb:Q9FJ32
PRIDE:Q9FJ32 EnsemblPlants:AT5G41820.1 GeneID:834187
KEGG:ath:AT5G41820 TAIR:At5g41820 InParanoid:Q9FJ32 OMA:IYSAWHY
PhylomeDB:Q9FJ32 Genevestigator:Q9FJ32 Uniprot:Q9FJ32
Length = 687
Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
Identities = 224/465 (48%), Positives = 291/465 (62%)
Query: 1 MHGRPRKPLKPEDXXXXXXXXEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYT 60
MHGR R+ P E LR LQSQF+ NHH IY+KEA++LS KLL TNPE YT
Sbjct: 1 MHGRKREE-DPNPEETAAKALE-LRSLQSQFMSNHHQKIYTKEAIQLSAKLLITNPEFYT 58
Query: 61 AWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSK-GH 119
AWNY KLA + +L E DSDP + SI+DEEL VV++AL +N KSYGAW+HRKW+LSK GH
Sbjct: 59 AWNYPKLAFESRLDE-DSDPSLVNSIIDEELGVVQNALERNVKSYGAWYHRKWVLSKKGH 117
Query: 120 --SSIDNELRLLDKFQKA-----D-------SRNFHAWNYRRFVAASMNRSEEDELKYTE 165
S++NEL+LL+ +QK D SRNFHAWNYRRFV SEEDEL+YT
Sbjct: 118 YYPSLENELQLLNDYQKQAHQKQDDEKQDDPSRNFHAWNYRRFVVELTKTSEEDELQYTT 177
Query: 166 DMICN-NFSNYSAWHXXXXXXXXXXXXXVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGW 224
DMI + +F+ YSAWH +GF+ KE + E ++VH AIFT + QSGW
Sbjct: 178 DMISDISFTIYSAWHYRSVLVSSLVAKKADGFMPKETIRR-ELDYVHSAIFTLEEKQSGW 236
Query: 225 FYHLWLLDQTVRVDSPQLVSSWPTPGSDLILLGDRCLDGCASSP-FTRFHLDSRTFPLVL 283
FY+LWLLDQTV+++ P SSWP+ GS +IL G C + +S+ T F +S +FPL+L
Sbjct: 237 FYYLWLLDQTVKMEIPLRFSSWPSDGSIIILSGPDCFNASSSTTKLTTFCSESGSFPLIL 296
Query: 284 YFNQAVEGVNSSTITVDSELNTNKDLVWKPLSSC-NSKAAQ-VWVTQLNLPDGNT-HSSK 340
YF+QAV GV+SST+T+ SEL KDLVW+P+S NS+ VWV +L S K
Sbjct: 297 YFDQAVSGVSSSTVTIGSEL---KDLVWEPVSDKKNSQVDSCVWVARLKFDCREPCFSRK 353
Query: 341 VFPVEVSLGHSQGIISSSGFHYSNPFCFAFRVSLQFVETQPVEALGKE-IISWRDESFHN 399
V+VSLG GI+SS G + + P+ F F +L+ +T VE +E I+SW D F N
Sbjct: 354 ETKVKVSLG---GIVSSMGCNLTAPYEFVF--TLRIHDTVEVELSQQESIVSWTD-GFDN 407
Query: 400 YNAHSQDSSPISSLYQLSIKNDNELTDFEWRAATIAKEIDHFREL 444
++ ++ S+ ++SL L N T FEWR I EI+ FR L
Sbjct: 408 WDDNAL-SNDLNSLTAL-----NADTGFEWRKKAIKIEIELFRTL 446
>ZFIN|ZDB-GENE-060929-1042 [details] [associations]
symbol:rabggta "Rab geranylgeranyltransferase,
alpha subunit" species:7955 "Danio rerio" [GO:0018342 "protein
prenylation" evidence=IEA] [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002088
InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711 ProDom:PD331837
PROSITE:PS51147 PROSITE:PS51450 ZFIN:ZDB-GENE-060929-1042
GO:GO:0008270 InterPro:IPR025875 Pfam:PF12799 eggNOG:COG5536
GO:GO:0018342 GO:GO:0004663 CTD:5875 HOGENOM:HOG000007845
HOVERGEN:HBG002171 KO:K14050 OrthoDB:EOG4FXR7F Gene3D:2.60.40.1130
SUPFAM:SSF49594 EMBL:BC124249 IPI:IPI01024172 RefSeq:NP_001070131.1
UniGene:Dr.138610 ProteinModelPortal:Q08CG5 SMR:Q08CG5 PRIDE:Q08CG5
GeneID:767725 KEGG:dre:767725 InParanoid:Q08CG5 NextBio:20918111
Bgee:Q08CG5 Uniprot:Q08CG5
Length = 580
Score = 316 (116.3 bits), Expect = 8.7e-41, Sum P(3) = 8.7e-41
Identities = 65/184 (35%), Positives = 100/184 (54%)
Query: 1 MHGRPR-KPLKPEDXXXXXXXXEKLRVL---QSQFLHNHHNHIYSKEAVELSTKLLETNP 56
MHGR + K ++ +KL+ + L + +EA++L+ +LL +NP
Sbjct: 1 MHGRVKVKTTAQQEEEKRKEREKKLKAFVCARDSVLKKRSAGEHDEEALDLTQQLLSSNP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
+ T WNYR+ + H E + D ++ + + EL +E+ L+ N KSYG WHHR W+ +
Sbjct: 61 DFATLWNYRREVLLH--LETLREKDEVQKLYESELHFIEACLKVNPKSYGCWHHRSWVNT 118
Query: 117 K-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175
+ EL L D+ D RNFH W+YRR V S E EL++T+ +I +NFSNY
Sbjct: 119 RLPQPDWTRELGLCDRCLSLDERNFHCWDYRRLVVKESGVSVEQELQFTDRLIGSNFSNY 178
Query: 176 SAWH 179
S+WH
Sbjct: 179 SSWH 182
Score = 120 (47.3 bits), Expect = 8.7e-41, Sum P(3) = 8.7e-41
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 197 VSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVR 236
V +E++L EYE H A FTDP+DQS WFY+ WLL + R
Sbjct: 218 VCEEQLLK-EYELAHNAFFTDPNDQSAWFYYRWLLGRAER 256
Score = 101 (40.6 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 25/108 (23%), Positives = 54/108 (50%)
Query: 39 IYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESAL 98
+Y E + L+ NP+ Y W++R V +L + PD + EL + + L
Sbjct: 88 LYESE-LHFIEACLKVNPKSYGCWHHRSW-VNTRLPQ----PDWTR-----ELGLCDRCL 136
Query: 99 RQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYR 146
+ +++ W +R+ ++ + S++ EL+ D+ ++ N+ +W+YR
Sbjct: 137 SLDERNFHCWDYRRLVVKESGVSVEQELQFTDRLIGSNFSNYSSWHYR 184
Score = 74 (31.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 47 LSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYG 106
L + L + + W+YR+L V+ +S S+ ++EL+ + + NF +Y
Sbjct: 131 LCDRCLSLDERNFHCWDYRRLVVK----------ESGVSV-EQELQFTDRLIGSNFSNYS 179
Query: 107 AWHHRKWIL 115
+WH+R +L
Sbjct: 180 SWHYRSTLL 188
Score = 43 (20.2 bits), Expect = 8.7e-41, Sum P(3) = 8.7e-41
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 391 SW-RDESFHNYNAHSQDSSPISSLYQLSIKNDNELTDFE 428
SW RD + S+ S SS+ Q +++ N+L D E
Sbjct: 353 SWCRDSATDQELFRSELSVEKSSVLQAELQSCNQLLDLE 391
>UNIPROTKB|F1PIE1 [details] [associations]
symbol:RABGGTA "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002088
InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711 ProDom:PD331837
PROSITE:PS51147 GO:GO:0008270 InterPro:IPR025875 Pfam:PF12799
GO:GO:0018342 GO:GO:0004663 CTD:5875 GeneTree:ENSGT00550000075121
KO:K14050 OMA:DFATLWN Gene3D:2.60.40.1130 SUPFAM:SSF49594
EMBL:AAEX03005616 RefSeq:XP_850528.1 Ensembl:ENSCAFT00000019372
GeneID:608407 KEGG:cfa:608407 Uniprot:F1PIE1
Length = 567
Score = 406 (148.0 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 94/238 (39%), Positives = 124/238 (52%)
Query: 1 MHGRPRKPLKPEDXXXXXXXXE-KLRVLQS--QFLHNHHNHIYSKEAV-ELSTKLLETNP 56
MHGR + E E KL++ QS Q + E+V EL++++L NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQTVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
+ T WN R+ +Q E P+ L +++ EL +ES LR N KSYG WHHR W+L
Sbjct: 61 DFATLWNCRREVLQR--LEAQKSPEELAALVKTELGFLESCLRVNPKSYGTWHHRCWLLG 118
Query: 117 K-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175
+ + EL L +F + D RNFH W+YRRFVAA +EL +T+ +I NFSNY
Sbjct: 119 RLPEPNWARELELCARFLEVDERNFHCWDYRRFVAAQAAVPPAEELAFTDSLITRNFSNY 178
Query: 176 SAWHXXXXXXXXXXXXXVEGFVSK--EKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231
S+WH G + E VL E E V A FTDP+DQS WFYH WLL
Sbjct: 179 SSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236
Score = 38 (18.4 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 218 PDDQSGWFYHLWLLD 232
PD ++ W H+WL D
Sbjct: 290 PDGRN-WPGHVWLCD 303
>RGD|621697 [details] [associations]
symbol:Rabggta "Rab geranylgeranyltransferase, alpha subunit"
species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=ISO;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=ISO;IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002088 InterPro:IPR009087
Pfam:PF01239 Pfam:PF07711 ProDom:PD331837 PROSITE:PS51147
RGD:621697 GO:GO:0046872 GO:GO:0008270 eggNOG:COG5536 GO:GO:0018344
GO:GO:0004663 CTD:5875 GeneTree:ENSGT00550000075121
HOGENOM:HOG000007845 HOVERGEN:HBG002171 KO:K14050 OrthoDB:EOG4FXR7F
Gene3D:2.60.40.1130 SUPFAM:SSF49594 EMBL:L10415 EMBL:S62096
EMBL:BC086547 IPI:IPI00231284 PIR:A45977 RefSeq:NP_113842.1
UniGene:Rn.29434 PDB:1DCE PDB:1LTX PDB:3C72 PDB:3DSS PDB:3DST
PDB:3DSU PDB:3DSV PDB:3DSW PDB:3DSX PDB:3HXB PDB:3HXC PDB:3HXD
PDB:3HXE PDB:3HXF PDB:4EHM PDB:4GTS PDB:4GTT PDB:4GTV PDBsum:1DCE
PDBsum:1LTX PDBsum:3C72 PDBsum:3DSS PDBsum:3DST PDBsum:3DSU
PDBsum:3DSV PDBsum:3DSW PDBsum:3DSX PDBsum:3HXB PDBsum:3HXC
PDBsum:3HXD PDBsum:3HXE PDBsum:3HXF PDBsum:4EHM PDBsum:4GTS
PDBsum:4GTT PDBsum:4GTV ProteinModelPortal:Q08602 SMR:Q08602
DIP:DIP-6137N STRING:Q08602 PRIDE:Q08602 Ensembl:ENSRNOT00000048455
GeneID:58983 KEGG:rno:58983 UCSC:RGD:621697 InParanoid:Q08602
EvolutionaryTrace:Q08602 NextBio:611680 Genevestigator:Q08602
GermOnline:ENSRNOG00000030483 Uniprot:Q08602
Length = 567
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 109/295 (36%), Positives = 148/295 (50%)
Query: 1 MHGRPRKPLKPEDXXXXXXXXE-KLRVLQS--QFLHNHHNHIYSKEAV-ELSTKLLETNP 56
MHGR + E E KL++ QS Q + E+V EL++++L NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
+ T WN R+ +QH E + P+ +++ EL +ES LR N KSYG WHHR W+LS
Sbjct: 61 DFATLWNCRREVLQH--LETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLS 118
Query: 117 K-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175
+ + EL L +F +AD RNFH W+YRRFVAA + +EL +T+ +I NFSNY
Sbjct: 119 RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178
Query: 176 SAWHXXXXXXXXXXXXXVEGFVSK--EKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233
S+WH G + E VL E E V A FTDP+DQS WFYH WLL +
Sbjct: 179 SSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGR 238
Query: 234 TVRVDSPQLVSSWPTPGSDLILLGDRCLDGCASSPFTRFHLDSRTFPLVLYFNQA 288
D V + + CL C S P T + SR L+L ++A
Sbjct: 239 AEPHDVLCCVH---------VSREEACLSVCFSRPLT---VGSRMGTLLLMVDEA 281
>MGI|MGI:1860443 [details] [associations]
symbol:Rabggta "Rab geranylgeranyl transferase, a subunit"
species:10090 "Mus musculus" [GO:0004659 "prenyltransferase
activity" evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=ISO;IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018342 "protein prenylation" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=ISO;IMP] [GO:0046872 "metal
ion binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR002088 InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711
ProDom:PD331837 PROSITE:PS51147 MGI:MGI:1860443 GO:GO:0046872
GO:GO:0008270 eggNOG:COG5536 GO:GO:0018344 GO:GO:0004663 CTD:5875
GeneTree:ENSGT00550000075121 HOGENOM:HOG000007845
HOVERGEN:HBG002171 KO:K14050 OMA:DFATLWN OrthoDB:EOG4FXR7F
Gene3D:2.60.40.1130 SUPFAM:SSF49594 EMBL:AF127654 EMBL:AF127655
EMBL:AF127656 EMBL:AF127658 EMBL:AF127659 EMBL:AF127660
EMBL:AF127662 EMBL:AK002625 IPI:IPI00271905 IPI:IPI00620701
RefSeq:NP_062392.1 UniGene:Mm.87216 PDB:3PZ1 PDB:3PZ2 PDB:3PZ3
PDBsum:3PZ1 PDBsum:3PZ2 PDBsum:3PZ3 ProteinModelPortal:Q9JHK4
SMR:Q9JHK4 IntAct:Q9JHK4 STRING:Q9JHK4 PhosphoSite:Q9JHK4
PaxDb:Q9JHK4 PRIDE:Q9JHK4 Ensembl:ENSMUST00000062861
Ensembl:ENSMUST00000163889 Ensembl:ENSMUST00000169237 GeneID:56187
KEGG:mmu:56187 UCSC:uc007uai.1 InParanoid:Q9JHK4
EvolutionaryTrace:Q9JHK4 NextBio:311974 Bgee:Q9JHK4
CleanEx:MM_RABGGTA Genevestigator:Q9JHK4
GermOnline:ENSMUSG00000040472 Uniprot:Q9JHK4
Length = 567
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 96/238 (40%), Positives = 127/238 (53%)
Query: 1 MHGRPRKPLKPEDXXXXXXXXE-KLRVLQS--QFLHNHHNHIYSKEAV-ELSTKLLETNP 56
MHGR + E E KL++ QS Q + E+V EL++++L NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKREAGELDESVLELTSQILGANP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
+ T WN R+ +Q E P+ L +++ EL +ES LR N KSYG WHHR W+LS
Sbjct: 61 DFATLWNCRREVLQQ--LETQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLS 118
Query: 117 K-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175
+ + EL L +F +AD RNFH W+YRRFVAA + +EL +T+ +I NFSNY
Sbjct: 119 RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178
Query: 176 SAWHXXXXXXXXXXXXXVEGFVSK--EKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231
S+WH G + E VL E E V A FTDP+DQS WFYH WLL
Sbjct: 179 SSWHYRSCLLPQLHPQPDSGPQGRLPENVLLRELELVQNAFFTDPNDQSAWFYHRWLL 236
>UNIPROTKB|F1MGN1 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9913 "Bos taurus" [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IEA]
InterPro:IPR002088 InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711
ProDom:PD331837 PROSITE:PS51147 GO:GO:0008270 GO:GO:0018342
GO:GO:0004663 GeneTree:ENSGT00550000075121 Gene3D:2.60.40.1130
SUPFAM:SSF49594 EMBL:DAAA02028027 IPI:IPI00689272
Ensembl:ENSBTAT00000036474 ArrayExpress:F1MGN1 Uniprot:F1MGN1
Length = 333
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 94/238 (39%), Positives = 125/238 (52%)
Query: 1 MHGRPRKPLKPEDXXXXXXXXE-KLRVLQS--QFLHNHHNHIYSKEAV-ELSTKLLETNP 56
MHGR + E E KL++ Q+ Q + E+V EL++++L NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQAATQTVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
+ T WN R+ +Q E P+ L +++ EL +ES LR N KSYG WHHR W+LS
Sbjct: 61 DFATLWNCRREVLQQ--LEVQKSPEELATLVKAELGFLESCLRVNPKSYGTWHHRCWLLS 118
Query: 117 K-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175
+ + EL L +F + D RNFH W+YRRFVAA +EL +T+ +I NFSNY
Sbjct: 119 RLPEPNWARELELCARFLEVDERNFHCWDYRRFVAAQAAVPPAEELAFTDSLITRNFSNY 178
Query: 176 SAWHXXXXXXXXXXXXXVEGFVSK--EKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231
S+WH G + E VL E E V A FTDP+DQS WFYH WLL
Sbjct: 179 SSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236
>UNIPROTKB|Q5EA80 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9913 "Bos taurus" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR002088 InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711
ProDom:PD331837 PROSITE:PS51147 GO:GO:0046872 GO:GO:0008270
eggNOG:COG5536 GO:GO:0018344 GO:GO:0004663 EMBL:BT020689
EMBL:BT020760 EMBL:BT020911 EMBL:BC111228 EMBL:BT020650
IPI:IPI00717057 RefSeq:NP_001015614.1 UniGene:Bt.7696
ProteinModelPortal:Q5EA80 SMR:Q5EA80 STRING:Q5EA80 PRIDE:Q5EA80
Ensembl:ENSBTAT00000025020 GeneID:516619 KEGG:bta:516619 CTD:5875
GeneTree:ENSGT00550000075121 HOGENOM:HOG000007845
HOVERGEN:HBG002171 InParanoid:Q5EA80 KO:K14050 OMA:DFATLWN
OrthoDB:EOG4FXR7F NextBio:20872272 ArrayExpress:Q5EA80
Gene3D:2.60.40.1130 SUPFAM:SSF49594 Uniprot:Q5EA80
Length = 567
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 94/238 (39%), Positives = 125/238 (52%)
Query: 1 MHGRPRKPLKPEDXXXXXXXXE-KLRVLQS--QFLHNHHNHIYSKEAV-ELSTKLLETNP 56
MHGR + E E KL++ Q+ Q + E+V EL++++L NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQAATQTVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
+ T WN R+ +Q E P+ L +++ EL +ES LR N KSYG WHHR W+LS
Sbjct: 61 DFATLWNCRREVLQQ--LEVQKSPEELATLVKAELGFLESCLRVNPKSYGTWHHRCWLLS 118
Query: 117 K-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175
+ + EL L +F + D RNFH W+YRRFVAA +EL +T+ +I NFSNY
Sbjct: 119 RLPEPNWARELELCARFLEVDERNFHCWDYRRFVAAQAAVPPAEELAFTDSLITRNFSNY 178
Query: 176 SAWHXXXXXXXXXXXXXVEGFVSK--EKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231
S+WH G + E VL E E V A FTDP+DQS WFYH WLL
Sbjct: 179 SSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236
>UNIPROTKB|H0YLH3 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9606 "Homo sapiens" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IEA] InterPro:IPR002088 InterPro:IPR009087 Pfam:PF01239
Pfam:PF07711 ProDom:PD331837 PROSITE:PS51147 GO:GO:0008270
EMBL:AL096870 GO:GO:0018342 GO:GO:0004663 Gene3D:2.60.40.1130
SUPFAM:SSF49594 HGNC:HGNC:9795 SMR:H0YLH3 Ensembl:ENST00000558376
Ensembl:ENST00000559974 Uniprot:H0YLH3
Length = 424
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 93/238 (39%), Positives = 123/238 (51%)
Query: 1 MHGRPRKPLKPEDXXXXXXXXE-KLRVLQS--QFLHNHHNHIYSKEAV-ELSTKLLETNP 56
MHGR + E E KL++ QS Q + E+V EL++++L NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
+ T WN R+ +Q E P+ L +++ EL +ES LR N KSYG WHHR W+L
Sbjct: 61 DFATLWNCRREVLQQ--LETQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLG 118
Query: 117 K-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175
+ + EL L +F + D RNFH W+YRRFVA +EL +T+ +I NFSNY
Sbjct: 119 RLPEPNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNY 178
Query: 176 SAWHXXXXXXXXXXXXXVEGFVSK--EKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231
S+WH G + E VL E E V A FTDP+DQS WFYH WLL
Sbjct: 179 SSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236
>UNIPROTKB|Q92696 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] [GO:0018344 "protein geranylgeranylation"
evidence=IEA] [GO:0006464 "cellular protein modification process"
evidence=TAS] [GO:0007601 "visual perception" evidence=TAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002088
InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711 ProDom:PD331837
PROSITE:PS51147 PROSITE:PS51450 GO:GO:0046872 GO:GO:0007601
GO:GO:0008270 EMBL:CH471078 GO:GO:0006464
Pathway_Interaction_DB:prlsignalingeventspathway eggNOG:COG5536
GO:GO:0018344 GO:GO:0004663 CTD:5875 HOGENOM:HOG000007845
HOVERGEN:HBG002171 KO:K14050 OMA:DFATLWN OrthoDB:EOG4FXR7F
Gene3D:2.60.40.1130 SUPFAM:SSF49594 EMBL:Y08200 EMBL:AK291347
EMBL:AK292613 EMBL:BC003093 IPI:IPI00022664 PIR:JC5538
RefSeq:NP_004572.3 RefSeq:NP_878256.1 UniGene:Hs.377992
ProteinModelPortal:Q92696 SMR:Q92696 STRING:Q92696
PhosphoSite:Q92696 DMDM:6093707 PaxDb:Q92696 PRIDE:Q92696
Ensembl:ENST00000216840 Ensembl:ENST00000399409 GeneID:5875
KEGG:hsa:5875 UCSC:uc001wof.3 GeneCards:GC14M024734 HGNC:HGNC:9795
HPA:HPA043488 MIM:601905 neXtProt:NX_Q92696 PharmGKB:PA34156
InParanoid:Q92696 BindingDB:Q92696 ChEMBL:CHEMBL5249
GenomeRNAi:5875 NextBio:22826 ArrayExpress:Q92696 Bgee:Q92696
CleanEx:HS_RABGGTA Genevestigator:Q92696 GermOnline:ENSG00000100949
Uniprot:Q92696
Length = 567
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 93/238 (39%), Positives = 123/238 (51%)
Query: 1 MHGRPRKPLKPEDXXXXXXXXE-KLRVLQS--QFLHNHHNHIYSKEAV-ELSTKLLETNP 56
MHGR + E E KL++ QS Q + E+V EL++++L NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
+ T WN R+ +Q E P+ L +++ EL +ES LR N KSYG WHHR W+L
Sbjct: 61 DFATLWNCRREVLQQ--LETQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLG 118
Query: 117 K-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175
+ + EL L +F + D RNFH W+YRRFVA +EL +T+ +I NFSNY
Sbjct: 119 RLPEPNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNY 178
Query: 176 SAWHXXXXXXXXXXXXXVEGFVSK--EKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231
S+WH G + E VL E E V A FTDP+DQS WFYH WLL
Sbjct: 179 SSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236
>UNIPROTKB|A5A779 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9823 "Sus scrofa" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR002088 InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711
ProDom:PD331837 PROSITE:PS51147 GO:GO:0046872 GO:GO:0008270
InterPro:IPR025875 Pfam:PF12799 eggNOG:COG5536 GO:GO:0018344
GO:GO:0004663 CTD:5875 GeneTree:ENSGT00550000075121
HOGENOM:HOG000007845 HOVERGEN:HBG002171 KO:K14050 OMA:DFATLWN
OrthoDB:EOG4FXR7F Gene3D:2.60.40.1130 SUPFAM:SSF49594 EMBL:AB271949
RefSeq:NP_001092063.1 UniGene:Ssc.45681 ProteinModelPortal:A5A779
SMR:A5A779 STRING:A5A779 Ensembl:ENSSSCT00000002230
GeneID:100049679 KEGG:ssc:100049679 Uniprot:A5A779
Length = 567
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 92/238 (38%), Positives = 124/238 (52%)
Query: 1 MHGRPRKPLKPEDXXXXXXXXE-KLRVLQS--QFLHNHHNHIYSKEAV-ELSTKLLETNP 56
MHGR + E E KL++ Q+ Q + E+V EL++++L NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQTATQTVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
+ T WN R+ +Q E P+ L +++ EL +ES LR N KSYG WHHR W+L
Sbjct: 61 DFATLWNCRREVLQR--LEVQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLG 118
Query: 117 K-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175
+ + EL L +F + D RNFH W+YRRFVA+ +EL +T+ +I NFSNY
Sbjct: 119 RLPEPNWARELELCARFLEVDERNFHCWDYRRFVASQAAVPPAEELAFTDSLITRNFSNY 178
Query: 176 SAWHXXXXXXXXXXXXXVEGFVSK--EKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231
S+WH G + E VL E E V A FTDP+DQS WFYH WLL
Sbjct: 179 SSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236
>DICTYBASE|DDB_G0269570 [details] [associations]
symbol:rabggta "protein geranylgeranyltransferase
type II" species:44689 "Dictyostelium discoideum" [GO:0018342
"protein prenylation" evidence=IEA] [GO:0008318 "protein
prenyltransferase activity" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA;ISS] [GO:0018344
"protein geranylgeranylation" evidence=ISS] [GO:0005968
"Rab-protein geranylgeranyltransferase complex" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0004659 "prenyltransferase
activity" evidence=IEA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 dictyBase:DDB_G0269570 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0046872 eggNOG:COG5536
GO:GO:0018344 GO:GO:0004663 KO:K14050 RefSeq:XP_646077.2
HSSP:Q08602 ProteinModelPortal:Q55DQ4 STRING:Q55DQ4
EnsemblProtists:DDB0233950 GeneID:8617027 KEGG:ddi:DDB_G0269570
OMA:FPKCYWI ProtClustDB:CLSZ2501688 GO:GO:0005968 Uniprot:Q55DQ4
Length = 311
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 77/201 (38%), Positives = 111/201 (55%)
Query: 32 LHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEEL 91
L N Y + ++ +S +L NPE YT WNYR+LA+ + TE + + L+ I E+
Sbjct: 38 LREKQNGRYDEISLSVSKLVLIENPEFYTIWNYRRLAIL-QFTETKENSE-LQVIYQNEM 95
Query: 92 RVVESALRQNFKSYGAWHHRKWI-LSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVA 150
+ +E +++ KSY W HR+WI L + + E++L K D RNFH W +RRF+
Sbjct: 96 KFLEECIQRFTKSYWIWFHRQWIALRMDNCDWEREMKLCTKLLNFDLRNFHCWGHRRFIL 155
Query: 151 ASMNRSEEDELKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEKVLPDEYEFV 210
N EDELKYT + + NFSNYSAWH E + EK+L +E+E V
Sbjct: 156 KHSNIKLEDELKYTTEKVEQNFSNYSAWHQRSSILPKIYKEP-EQLL--EKIL-EEFELV 211
Query: 211 HQAIFTDPDDQSGWFYHLWLL 231
A++T+P D S W YH WL+
Sbjct: 212 RNAVYTEPKDSSSWIYHKWLV 232
>POMBASE|SPCC1620.05 [details] [associations]
symbol:SPCC1620.05 "Rab geranylgeranyltransferase alpha
subunit (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005968 "Rab-protein geranylgeranyltransferase
complex" evidence=ISO] [GO:0006612 "protein targeting to membrane"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0018344 "protein geranylgeranylation"
evidence=ISO] [GO:0032153 "cell division site" evidence=IDA]
[GO:0044732 "mitotic spindle pole body" evidence=IDA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 PomBase:SPCC1620.05
GO:GO:0005829 GO:GO:0005634 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0032153 GO:GO:0044732 GO:GO:0006612 GO:GO:0006888
eggNOG:COG5536 GO:GO:0018344 GO:GO:0004663 KO:K14050 HSSP:Q08602
OMA:FPKCYWI GO:GO:0005968 PIR:T41035 RefSeq:NP_588463.1
ProteinModelPortal:O94412 STRING:O94412 EnsemblFungi:SPCC1620.05.1
GeneID:2539343 KEGG:spo:SPCC1620.05 HOGENOM:HOG000190796
OrthoDB:EOG454D7T NextBio:20800508 Uniprot:O94412
Length = 344
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 81/244 (33%), Positives = 127/244 (52%)
Query: 1 MHGRPRKPLKPEDXXXXX----XXXEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNP 56
MHG R L E E+ R L S+F YS+ ++L+T+LL+ NP
Sbjct: 1 MHGILRVKLSEEQRKLKAEKERAKIEEYRGLVSRFQEARKRKDYSEGNLKLTTELLDWNP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
E Y+ WNYR+ + + + S + + +LD EL+ V S ++ K Y ++HR+W L
Sbjct: 61 ETYSVWNYRREILLNDVFPKISLNEK-QDLLDNELKYVLSKMKVFPKVYWIFNHRRWCLE 119
Query: 117 KG-HSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRS-----EEDELKYTEDMICN 170
+ + + E+ + +K AD+RNFH W+YRR+V + + R+ + E++YT I
Sbjct: 120 NAPYPNWNYEMMITEKLLSADARNFHGWHYRRYVVSQIERAGNCSLAKKEMEYTTSAIAT 179
Query: 171 NFSNYSAWHXXXXXXXXXXXXXVEGFVSK---EKVLPDEYEFVHQAIFTDPDDQSGWFYH 227
NFSN+SA H + K +++L E + +HQA+FTDPDD S W YH
Sbjct: 180 NFSNFSALHNRTKLIETILNLEADPNSQKALAKQILEQELDMIHQAVFTDPDDSSVWIYH 239
Query: 228 LWLL 231
WL+
Sbjct: 240 RWLM 243
>ASPGD|ASPL0000044135 [details] [associations]
symbol:AN1981 species:162425 "Emericella nidulans"
[GO:0006612 "protein targeting to membrane" evidence=IEA]
[GO:0018344 "protein geranylgeranylation" evidence=IEA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=IEA] [GO:0004663
"Rab geranylgeranyltransferase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005968
"Rab-protein geranylgeranyltransferase complex" evidence=IEA]
[GO:0032153 "cell division site" evidence=IEA] InterPro:IPR002088
Pfam:PF01239 PROSITE:PS51147 EMBL:BN001307 eggNOG:COG5536
GO:GO:0008318 GO:GO:0018342 KO:K14050 OMA:FPKCYWI
HOGENOM:HOG000190796 OrthoDB:EOG454D7T EMBL:AACD01000030
RefSeq:XP_659585.1 ProteinModelPortal:Q5BBU9 STRING:Q5BBU9
EnsemblFungi:CADANIAT00008643 GeneID:2874880 KEGG:ani:AN1981.2
Uniprot:Q5BBU9
Length = 359
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 70/216 (32%), Positives = 112/216 (51%)
Query: 37 NHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTE------NDSDPDSLKSILDEE 90
N Y+ E ++ ++LL+ NPE YT WNYR+ + H+ ++ +++D + + +++ +
Sbjct: 42 NRKYTPETLQKLSELLKKNPEYYTMWNYRRRVLLHEFSQAVPELPSETDIERITTLIQTD 101
Query: 91 LRVVESALRQNFKSYGAWHHRKWILSKGHSSI---------DNELRLLDKFQKADSRNFH 141
L+ + LR K Y W++R W+L + + EL L+ K DSRNFH
Sbjct: 102 LQFLIPLLRSFPKCYWIWNYRLWLLDEAKRLLPKAIARKVWQQELALVGKMLNLDSRNFH 161
Query: 142 AWNYRRFVAASMNR--SEED--------ELKYTEDMICNNFSNYSAWHXXXXXXXXXXXX 191
W YRRFV ++ R S+E+ E +Y + MI N SN+SAWH
Sbjct: 162 GWGYRRFVVETLERLSSDEENEKSLTESEFEYAKKMIGTNLSNFSAWHYRTKLIQRLLSE 221
Query: 192 XVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYH 227
++++L DE E +H+A+ DP DQS WFYH
Sbjct: 222 KSASDEERKQILDDELELIHRAL-CDPYDQSLWFYH 256
>SGD|S000003568 [details] [associations]
symbol:BET4 "Alpha subunit of Type II
geranylgeranyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0006612 "protein targeting to membrane" evidence=IMP]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IMP]
[GO:0004659 "prenyltransferase activity" evidence=IEA] [GO:0005968
"Rab-protein geranylgeranyltransferase complex" evidence=IDA;IPI]
[GO:0018342 "protein prenylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=IMP;IDA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA;IDA] [GO:0008318
"protein prenyltransferase activity" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 SGD:S000003568
EMBL:U14132 EMBL:BK006943 GO:GO:0006612 GO:GO:0006888
eggNOG:COG5536 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00550000075121 KO:K14050 OMA:FPKCYWI GO:GO:0005968
HOGENOM:HOG000190796 OrthoDB:EOG454D7T EMBL:Z49307 PIR:S48301
RefSeq:NP_012503.2 ProteinModelPortal:Q00618 SMR:Q00618
DIP:DIP-4994N IntAct:Q00618 MINT:MINT-568965 STRING:Q00618
PaxDb:Q00618 EnsemblFungi:YJL031C GeneID:853421 KEGG:sce:YJL031C
CYGD:YJL031c NextBio:973945 Genevestigator:Q00618
GermOnline:YJL031C Uniprot:Q00618
Length = 327
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 81/248 (32%), Positives = 121/248 (48%)
Query: 1 MHGRPRKPLKPEDXXXXXXXXEK----LRVLQSQFLHNHHNHIYSKEAVELSTKLLETNP 56
MHG RK E EK R L L+ IYS EA++ +++LLE NP
Sbjct: 1 MHGIKRKQWTKELLRQKRVQDEKKIYDYRSLTENVLNMRDEKIYSIEALKKTSELLEKNP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
E WNYR+ + +E + P D+EL V L+ K Y W+HR W+L
Sbjct: 61 EFNAIWNYRRDIIASLASELEI-P-----FWDKELVFVMMLLKDYPKVYWIWNHRLWVLK 114
Query: 117 KGHSSI----DNELRLLDKFQKADSRNFHAWNYRRFVAASM----NRS-EEDELKYTEDM 167
+S EL +++K + D+RN+H W+YRR V ++ N+S +++E +YT
Sbjct: 115 HYPTSSPKVWQTELAVVNKLLEQDARNYHGWHYRRIVVGNIESITNKSLDKEEFEYTTIK 174
Query: 168 ICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYH 227
I NN SNYSAWH G ++++ + E ++ A+FTD +DQS WFY
Sbjct: 175 INNNISNYSAWHQRVQIISRMFQKGEVG--NQKEYIRTEISYIINAMFTDAEDQSVWFYI 232
Query: 228 LWLLDQTV 235
W + +
Sbjct: 233 KWFIKNDI 240
>WB|WBGene00019778 [details] [associations]
symbol:M57.2 species:6239 "Caenorhabditis elegans"
[GO:0008318 "protein prenyltransferase activity" evidence=IEA]
[GO:0018342 "protein prenylation" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0008219 "cell death" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] InterPro:IPR001611
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 PROSITE:PS51450
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008219 GO:GO:0040011
eggNOG:COG5536 GO:GO:0008318 GO:GO:0018342
GeneTree:ENSGT00550000075121 KO:K14050 HSSP:Q08602 EMBL:FO080120
PIR:T33742 RefSeq:NP_500367.1 ProteinModelPortal:Q9TYY0 SMR:Q9TYY0
STRING:Q9TYY0 PaxDb:Q9TYY0 EnsemblMetazoa:M57.2.1
EnsemblMetazoa:M57.2.2 EnsemblMetazoa:M57.2.3 GeneID:177113
KEGG:cel:CELE_M57.2 UCSC:M57.2.2 CTD:177113 WormBase:M57.2
HOGENOM:HOG000020498 InParanoid:Q9TYY0 OMA:WYQRAWV NextBio:895394
Uniprot:Q9TYY0
Length = 580
Score = 313 (115.2 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 68/209 (32%), Positives = 108/209 (51%)
Query: 40 YSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTEND-----SDPDS---------LKS 85
Y E + L+ +LE N ++YT WN R+ ++ ++ N+ +D + +++
Sbjct: 44 YDDEILSLTQAILEKNADIYTFWNIRRTTIELRMEANEKVQQSADAEEEEKTKSSQKIEN 103
Query: 86 ILDEELRVVESALRQNFKSYGAWHHRKWILSKGHS-SIDNELRLLDKFQKADSRNFHAWN 144
+L EL + ++ N KSY AW+ R W L + + EL L +K + D RNFH W+
Sbjct: 104 LLAGELFLSYECIKSNPKSYSAWYQRAWALQRQSAPDFKKELALCEKALQLDCRNFHCWD 163
Query: 145 YRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVS-KEKVL 203
+RR VA RSE +EL+++ +I +NFSNYSAWH G ++++
Sbjct: 164 HRRIVARMAKRSEAEELEFSNKLINDNFSNYSAWHYRSIALKNIHRDEKTGAPKIDDELI 223
Query: 204 PDEYEFVHQAIFTDPDDQSGWFYHLWLLD 232
E + V A F D +DQS W Y WLL+
Sbjct: 224 ASELQKVKNAFFMDAEDQSAWTYTRWLLE 252
>FB|FBgn0037293 [details] [associations]
symbol:CG12007 species:7227 "Drosophila melanogaster"
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=ISS] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0008360
"regulation of cell shape" evidence=IMP] [GO:0018342 "protein
prenylation" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 EMBL:AE014297
GO:GO:0022008 GO:GO:0008360 GO:GO:0007155 eggNOG:COG5536
GO:GO:0018342 GO:GO:0004663 GeneTree:ENSGT00550000075121 KO:K14050
HSSP:Q08602 EMBL:AY058618 RefSeq:NP_649512.1 UniGene:Dm.4147
SMR:Q9VN77 IntAct:Q9VN77 MINT:MINT-917999
EnsemblMetazoa:FBtr0078842 GeneID:40617 KEGG:dme:Dmel_CG12007
UCSC:CG12007-RA FlyBase:FBgn0037293 InParanoid:Q9VN77 OMA:QRDRPMS
OrthoDB:EOG4H9W26 GenomeRNAi:40617 NextBio:819680 Uniprot:Q9VN77
Length = 515
Score = 297 (109.6 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 64/180 (35%), Positives = 86/180 (47%)
Query: 81 DSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKG-HSSIDNELRLLDKFQKADSRN 139
D SI EL + E L N KSY AWHHR W L + + E++L +K+ K D RN
Sbjct: 115 DKAHSIFTCELDLTEQCLMVNPKSYNAWHHRCWTLEQNPRADWQQEVKLCNKYLKFDERN 174
Query: 140 FHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSK 199
FH W+YRR+V EL + + I NFSNYS+WH
Sbjct: 175 FHTWDYRRYVTGKAMVPATQELDFCTEKIRANFSNYSSWHHRSLLLPELYPNQQRDRPMS 234
Query: 200 EKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVRVDSPQLVSSWPTPGSDLILLGDR 259
E+ L E E V A FTDP+D S WFY WLL ++D ++++ +L D+
Sbjct: 235 EEKLQKELEMVLTAAFTDPNDSSAWFYQRWLLGSGAQLDRAPRIAAFRLESHGAVLALDK 294
>POMBASE|SPAPB1A10.04c [details] [associations]
symbol:cwp1 "geranylgeranyltransferase I alpha subunit
Cwp1" species:4896 "Schizosaccharomyces pombe" [GO:0004660 "protein
farnesyltransferase activity" evidence=IEA] [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IEA]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005953 "CAAX-protein geranylgeranyltransferase
complex" evidence=NAS] [GO:0006612 "protein targeting to membrane"
evidence=IC] [GO:0018344 "protein geranylgeranylation" evidence=IC]
[GO:0034411 "cell wall (1->3)-beta-D-glucan biosynthetic process"
evidence=IPI] [GO:0004661 "protein geranylgeranyltransferase
activity" evidence=IDA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 PomBase:SPAPB1A10.04c GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006612 GO:GO:0034411
eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955 OMA:FNNSAWN
GO:GO:0005953 GO:GO:0004662 GO:GO:0004660 GO:GO:0018344
GO:GO:0004663 EMBL:AJ223304 RefSeq:NP_593518.1
ProteinModelPortal:O60052 STRING:O60052
EnsemblFungi:SPAPB1A10.04c.1 GeneID:2543143 KEGG:spo:SPAPB1A10.04c
OrthoDB:EOG43NBNJ NextBio:20804170 Uniprot:O60052
Length = 294
Score = 210 (79.0 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 59/195 (30%), Positives = 90/195 (46%)
Query: 40 YSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALR 99
YS A+ L+ L+ NP YT W YR + H P S +D EL ++
Sbjct: 57 YSLRALNLTGFLIMNNPAHYTVWAYRFQILNHT-------P----SYIDNELEWLDEIAE 105
Query: 100 QNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEED 159
K+Y WHHR+ ILS + + EL K + DS+N+H W+YR ++ + N +
Sbjct: 106 DFQKNYQVWHHRQKILSLT-KNYERELEFTKKMFEIDSKNYHVWSYRVWILQNFNDYSQ- 163
Query: 160 ELKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEKVLPDEYEFVHQAIFTDPD 219
ELK T +++ + N SAW+ VS L +E ++ I PD
Sbjct: 164 ELKLTNELLEKDIYNNSAWNHRFYVLFETSKV-----VSWS--LEEELNYLKDKILFAPD 216
Query: 220 DQSGWFYHLWLLDQT 234
+QS W Y +LD++
Sbjct: 217 NQSAWNYLCGVLDKS 231
Score = 134 (52.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 40/149 (26%), Positives = 68/149 (45%)
Query: 35 HHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVV 94
+H Y +E ++ E + Y W++R+ + LT+N + EL
Sbjct: 87 NHTPSYIDNELEWLDEIAEDFQKNYQVWHHRQKILS--LTKN----------YERELEFT 134
Query: 95 ESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMN 154
+ + K+Y W +R WIL + + EL+L ++ + D N AWN+R +V +
Sbjct: 135 KKMFEIDSKNYHVWSYRVWIL-QNFNDYSQELKLTNELLEKDIYNNSAWNHRFYVLFETS 193
Query: 155 R----SEEDELKYTEDMICNNFSNYSAWH 179
+ S E+EL Y +D I N SAW+
Sbjct: 194 KVVSWSLEEELNYLKDKILFAPDNQSAWN 222
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 36/142 (25%), Positives = 66/142 (46%)
Query: 98 LRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSE 157
+ N Y W +R IL+ S IDNEL LD+ + +N+ W++R+ + S+ ++
Sbjct: 69 IMNNPAHYTVWAYRFQILNHTPSYIDNELEWLDEIAEDFQKNYQVWHHRQKIL-SLTKNY 127
Query: 158 EDELKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEKVLPDEYEFVHQAIFTD 217
E EL++T+ M + NY W ++ F + L E + + I+ +
Sbjct: 128 ERELEFTKKMFEIDSKNYHVW--------SYRVWILQNFNDYSQELKLTNELLEKDIYNN 179
Query: 218 PDDQSGWFYHLWLLDQTVRVDS 239
S W + ++L +T +V S
Sbjct: 180 ----SAWNHRFYVLFETSKVVS 197
>TAIR|locus:2081177 [details] [associations]
symbol:FTA "farnesyltransferase A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008318 "protein prenyltransferase activity" evidence=IEA;IDA]
[GO:0018342 "protein prenylation" evidence=IEA;IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=TAS] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IPI]
[GO:0018343 "protein farnesylation" evidence=TAS] [GO:0018344
"protein geranylgeranylation" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0008360 "regulation
of cell shape" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0048509
"regulation of meristem development" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005965 "protein
farnesyltransferase complex" evidence=IPI] [GO:0009414 "response to
water deprivation" evidence=IMP] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008360 GO:GO:0009414 GO:GO:0009788 EMBL:AL356014
GO:GO:0048509 GO:GO:0018343 GO:GO:0004311 EMBL:AF064542
IPI:IPI00538297 PIR:T49006 PIR:T51811 RefSeq:NP_567084.1
UniGene:At.1520 ProteinModelPortal:Q9LX33 SMR:Q9LX33 IntAct:Q9LX33
STRING:Q9LX33 PaxDb:Q9LX33 PRIDE:Q9LX33 EnsemblPlants:AT3G59380.1
GeneID:825107 KEGG:ath:AT3G59380 TAIR:At3g59380 eggNOG:COG5536
HOGENOM:HOG000188957 InParanoid:Q9LX33 KO:K05955 OMA:FNNSAWN
BioCyc:MetaCyc:AT3G59380-MONOMER Genevestigator:Q9LX33
GermOnline:AT3G59380 GO:GO:0005953 GO:GO:0005965 GO:GO:0004662
GO:GO:0004660 GO:GO:0008318 GO:GO:0018344 Uniprot:Q9LX33
Length = 326
Score = 209 (78.6 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 59/226 (26%), Positives = 102/226 (45%)
Query: 22 EKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPD 81
E+ R F + + S A+ L+ + L N YT W++R+L ++
Sbjct: 37 EEFRETMDYFRAIYFSDERSPRALRLTEETLLLNSGNYTVWHFRRLVLE----------- 85
Query: 82 SLKSILDEELRVVESALRQNFKSYGAWHHRKWILSK-GHSSIDNELRLLDKFQKADSRNF 140
+L L EEL +E N K+Y WHHR+W+ K G EL + D++++
Sbjct: 86 ALNHDLFEELEFIERIAEDNSKNYQLWHHRRWVAEKLGPDVAGRELEFTRRVLSLDAKHY 145
Query: 141 HAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKE 200
HAW++R++ ++ EDEL Y +++ + N SAW+ + G E
Sbjct: 146 HAWSHRQWTLRALG-GWEDELDYCHELLEADVFNNSAWNQRYYVITQSPL--LGGL---E 199
Query: 201 KVLPDEYEFVHQAIFTDPDDQSGWFY--HLWLLDQTVRVDSPQLVS 244
+ E + +AI T+P ++S W Y L+ D+ + P + S
Sbjct: 200 AMRESEVSYTIKAILTNPANESSWRYLKALYKDDKESWISDPSVSS 245
>SGD|S000001502 [details] [associations]
symbol:RAM2 "Alpha subunit of farnesyltransferase and
geranylgeranyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0004660 "protein farnesyltransferase activity"
evidence=IEA;IDA] [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA;IDA] [GO:0005965
"protein farnesyltransferase complex" evidence=IDA] [GO:0004659
"prenyltransferase activity" evidence=IEA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IDA]
[GO:0007323 "peptide pheromone maturation" evidence=IDA]
[GO:0018343 "protein farnesylation" evidence=IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0004661 "protein
geranylgeranyltransferase activity" evidence=IDA] [GO:0008318
"protein prenyltransferase activity" evidence=IEA] [GO:0018342
"protein prenylation" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=IDA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 SGD:S000001502 EMBL:BK006944 GO:GO:0018343
GO:GO:0007323 eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955
OMA:FNNSAWN GO:GO:0005953 GO:GO:0005965 GO:GO:0004662 GO:GO:0004660
GO:GO:0018344 GeneTree:ENSGT00550000074935 OrthoDB:EOG43NBNJ
EMBL:M88584 EMBL:Z28019 EMBL:L24760 PIR:A41626 RefSeq:NP_012906.3
RefSeq:NP_012907.3 ProteinModelPortal:P29703 SMR:P29703
DIP:DIP-1233N IntAct:P29703 MINT:MINT-396243 STRING:P29703
PaxDb:P29703 EnsemblFungi:YKL019W GeneID:853849 GeneID:853851
KEGG:sce:YKL018W KEGG:sce:YKL019W CYGD:YKL019w KO:K14962
BindingDB:P29703 ChEMBL:CHEMBL2406 NextBio:975076
Genevestigator:P29703 GermOnline:YKL019W Uniprot:P29703
Length = 316
Score = 207 (77.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 55/187 (29%), Positives = 93/187 (49%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S A++L+ ++++ P YT WNYR V+H ++E++ D++ L++EL ++
Sbjct: 48 SPRALQLTAEIIDVAPAFYTIWNYRFNIVRHMMSESE---DTVL-YLNKELDWLDEVTLN 103
Query: 101 NFKSYGAWHHRKWILSKGHS-SIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEED 159
N K+Y W +R+ +L S S EL +L DS+N+H W+YR++ + +
Sbjct: 104 NPKNYQIWSYRQSLLKLHPSPSFKRELPILKLMIDDDSKNYHVWSYRKWCCLFFSDFQH- 162
Query: 160 ELKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEKVLPDEYEFVHQAIFTDPD 219
EL Y D+I + N SAW + +SK + L DE +F+ I P
Sbjct: 163 ELAYASDLIETDIYNNSAW-----THRMFYWVNAKDVISKVE-LADELQFIMDKIQLVPQ 216
Query: 220 DQSGWFY 226
+ S W Y
Sbjct: 217 NISPWTY 223
>FB|FBgn0031633 [details] [associations]
symbol:CG2976 species:7227 "Drosophila melanogaster"
[GO:0005965 "protein farnesyltransferase complex" evidence=ISS]
[GO:0004660 "protein farnesyltransferase activity" evidence=ISS]
[GO:0018342 "protein prenylation" evidence=IEA] InterPro:IPR002088
Pfam:PF01239 PROSITE:PS51147 EMBL:AE014134 eggNOG:COG5536 KO:K05955
GO:GO:0004660 GO:GO:0018342 OMA:HRRFIVE
GeneTree:ENSGT00550000074935 HSSP:Q04631 EMBL:AY118534
RefSeq:NP_608862.1 UniGene:Dm.11071 SMR:Q9VR31 STRING:Q9VR31
EnsemblMetazoa:FBtr0077415 GeneID:33682 KEGG:dme:Dmel_CG2976
UCSC:CG2976-RA FlyBase:FBgn0031633 InParanoid:Q9VR31
OrthoDB:EOG4RN8R8 GenomeRNAi:33682 NextBio:784761 Uniprot:Q9VR31
Length = 331
Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/141 (32%), Positives = 73/141 (51%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S+ A++L+T L NP YT W YR+ ++ LK+ L EL + + Q
Sbjct: 64 SQRALDLTTDALRLNPANYTVWQYRRDVLRE-----------LKADLYAELDYLTEVIGQ 112
Query: 101 NFKSYGAWHHRKWILSKGHSSIDNELRLLDK--FQKADSRNFHAWNYRRFVAASMNRSEE 158
N K+Y WHHR+ I+ + NEL L + D++N+HAW +R++ S N +
Sbjct: 113 NSKNYQVWHHRRVIVEMLNDP-SNELELTENALVNDGDAKNYHAWQHRQWAIRSFNLYD- 170
Query: 159 DELKYTEDMICNNFSNYSAWH 179
DEL + + +I + N SAW+
Sbjct: 171 DELSFVDRLISEDQRNNSAWN 191
Score = 152 (58.6 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 44/136 (32%), Positives = 69/136 (50%)
Query: 49 TKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQN--FKSYG 106
T+++ N + Y W++R++ V E +DP + EL + E+AL + K+Y
Sbjct: 107 TEVIGQNSKNYQVWHHRRVIV-----EMLNDPSN-------ELELTENALVNDGDAKNYH 154
Query: 107 AWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEE---DELKY 163
AW HR+W + + + D+EL +D+ D RN AWN R FV + E EL Y
Sbjct: 155 AWQHRQWAI-RSFNLYDDELSFVDRLISEDQRNNSAWNQRFFVIKHFGFTPELIQRELSY 213
Query: 164 TEDMICNNFSNYSAWH 179
T + I +N SAW+
Sbjct: 214 TMNRIRIIKNNESAWN 229
Score = 123 (48.4 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 36/136 (26%), Positives = 61/136 (44%)
Query: 91 LRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVA 150
L + ALR N +Y W +R+ +L + + + EL L + +S+N+ W++RR +
Sbjct: 68 LDLTTDALRLNPANYTVWQYRRDVLRELKADLYAELDYLTEVIGQNSKNYQVWHHRRVIV 127
Query: 151 ASMNRSEEDELKYTEDMICNN--FSNYSAWHXXXXXXXXXXXXXVEGFVSKEKVLPDEYE 208
+N +EL+ TE+ + N+ NY AW + F + DE
Sbjct: 128 EMLN-DPSNELELTENALVNDGDAKNYHAWQHRQWA--------IRSF----NLYDDELS 174
Query: 209 FVHQAIFTDPDDQSGW 224
FV + I D + S W
Sbjct: 175 FVDRLISEDQRNNSAW 190
>UNIPROTKB|E9PQP6 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9606 "Homo sapiens" [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0008318 GO:GO:0018342 EMBL:AC110275 EMBL:AC113191
HGNC:HGNC:3782 IPI:IPI00976845 ProteinModelPortal:E9PQP6 SMR:E9PQP6
Ensembl:ENST00000533336 ArrayExpress:E9PQP6 Bgee:E9PQP6
Uniprot:E9PQP6
Length = 249
Score = 180 (68.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 48/204 (23%), Positives = 94/204 (46%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S+ A +L+ +E N YT W++R++ ++ SL+ L EE+ + + + +
Sbjct: 51 SERAFKLTRDAIELNAANYTVWHFRRVLLK-----------SLQKDLHEEMNYITAIIEE 99
Query: 101 NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDE 160
K+Y WHHR+ +L + EL + D++N+HAW +R++V + ++E
Sbjct: 100 QPKNYQVWHHRR-VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEF-KLWDNE 157
Query: 161 LKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEKVLPDEYEFVHQAIFTDPDD 220
L+Y + ++ + N S W+ G+ + VL E ++ + I P +
Sbjct: 158 LQYVDQLLKEDVRNNSVWNQRYFVISNTT-----GY-NDRAVLEREVQYTLEMIKLVPHN 211
Query: 221 QSGWFYHLWLLDQTVRVDSPQLVS 244
+S W Y +L P L++
Sbjct: 212 ESAWNYLKGILQDRGLSKYPNLLN 235
>UNIPROTKB|F1NJX8 [details] [associations]
symbol:FNTA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0018342 "protein prenylation" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IEA] [GO:0004663
"Rab geranylgeranyltransferase activity" evidence=IEA] [GO:0030548
"acetylcholine receptor regulator activity" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0045213 "neurotransmitter receptor metabolic process"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0030548 GO:GO:0018342 OMA:HRRFIVE
GeneTree:ENSGT00550000074935 GO:GO:0004663 EMBL:AADN02066039
EMBL:AADN02066040 IPI:IPI00580315 Ensembl:ENSGALT00000024838
Uniprot:F1NJX8
Length = 347
Score = 189 (71.6 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 59/238 (24%), Positives = 103/238 (43%)
Query: 22 EKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPD 81
EK R + F S+ A +L+ +E N YT W++R++ +Q
Sbjct: 60 EKFRDVYDYFRAVLQKDERSERAFKLTADAIELNAANYTVWHFRRVLLQ----------- 108
Query: 82 SLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFH 141
SL L EEL+ + + + K+Y WHHR+ +L + EL + D++N+H
Sbjct: 109 SLGKDLYEELKYITAIIEDQPKNYQVWHHRR-VLVEWLQDPSQELEFIADILNQDAKNYH 167
Query: 142 AWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEK 201
AW +R++V + +DEL+Y + ++ + N S W+ G+
Sbjct: 168 AWQHRQWVIQEF-KLWDDELEYVDQLLREDVRNNSVWNQRYFVIFNTT-----GY-DDPA 220
Query: 202 VLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVRVDSP----QLVSSWPTPGSDLIL 255
VL E ++ + I P ++S W Y +L P QL+S P+ S ++
Sbjct: 221 VLDREVQYTLEMITAVPHNESAWNYLKGILQDRGLSKYPNLLEQLLSLQPSHSSPYLI 278
>MGI|MGI:104683 [details] [associations]
symbol:Fnta "farnesyltransferase, CAAX box, alpha"
species:10090 "Mus musculus" [GO:0004659 "prenyltransferase
activity" evidence=IEA] [GO:0004660 "protein farnesyltransferase
activity" evidence=ISO;IDA] [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=ISO] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005875 "microtubule associated
complex" evidence=ISO] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO] [GO:0008144 "drug binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] [GO:0010035 "response to inorganic substance"
evidence=ISO] [GO:0010469 "regulation of receptor activity"
evidence=IMP] [GO:0014070 "response to organic cyclic compound"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018342 "protein prenylation" evidence=IEA] [GO:0018343
"protein farnesylation" evidence=ISO] [GO:0019840 "isoprenoid
binding" evidence=ISO] [GO:0030548 "acetylcholine receptor
regulator activity" evidence=IMP] [GO:0030971 "receptor tyrosine
kinase binding" evidence=IPI] [GO:0034097 "response to cytokine
stimulus" evidence=ISO] [GO:0042277 "peptide binding" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO]
[GO:0045213 "neurotransmitter receptor metabolic process"
evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
evidence=ISO] [GO:0051770 "positive regulation of nitric-oxide
synthase biosynthetic process" evidence=ISO] [GO:0051771 "negative
regulation of nitric-oxide synthase biosynthetic process"
evidence=ISO] [GO:0090044 "positive regulation of tubulin
deacetylation" evidence=ISO] [GO:0090045 "positive regulation of
deacetylase activity" evidence=ISO] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 MGI:MGI:104683 GO:GO:0005737 GO:GO:0043066
GO:GO:0008144 GO:GO:0008284 GO:GO:0008270 GO:GO:0034097
GO:GO:0014070 GO:GO:0042277 GO:GO:0010035 GO:GO:0030548
GO:GO:0045213 GO:GO:0045787 eggNOG:COG5536 HOGENOM:HOG000188957
KO:K05955 GO:GO:0005953 GO:GO:0004662 GO:GO:0004660 CTD:2339
HOVERGEN:HBG004498 OrthoDB:EOG46DM39 GO:GO:0018342 OMA:HRRFIVE
EMBL:D49744 EMBL:BC012711 IPI:IPI00118904 PIR:JC4368
RefSeq:NP_032059.1 UniGene:Mm.3496 PDB:3PZ4 PDBsum:3PZ4
ProteinModelPortal:Q61239 SMR:Q61239 STRING:Q61239
PhosphoSite:Q61239 PaxDb:Q61239 PRIDE:Q61239
Ensembl:ENSMUST00000016138 GeneID:14272 KEGG:mmu:14272
GeneTree:ENSGT00550000074935 InParanoid:Q61239 BindingDB:Q61239
ChEMBL:CHEMBL2153 NextBio:285645 Bgee:Q61239 CleanEx:MM_FNTA
Genevestigator:Q61239 GermOnline:ENSMUSG00000015994 GO:GO:0019840
GO:GO:0004663 Uniprot:Q61239
Length = 377
Score = 188 (71.2 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 51/205 (24%), Positives = 93/205 (45%)
Query: 22 EKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPD 81
EK R + F S+ A +L+ +E N YT W++R++ ++
Sbjct: 94 EKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLR----------- 142
Query: 82 SLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFH 141
SL+ L EE+ + + + + K+Y WHHR+ +L + EL + D++N+H
Sbjct: 143 SLQKDLQEEMNYITAIIEEQPKNYQVWHHRR-VLVEWLKDPSQELEFIADILSQDAKNYH 201
Query: 142 AWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEK 201
AW +R++V R ++EL+Y + ++ + N S W+ G+ S
Sbjct: 202 AWQHRQWVIQEF-RLWDNELQYVDQLLKEDVRNNSVWNQRHFVISNTT-----GY-SDRA 254
Query: 202 VLPDEYEFVHQAIFTDPDDQSGWFY 226
VL E ++ + I P ++S W Y
Sbjct: 255 VLEREVQYTLEMIKLVPHNESAWNY 279
>UNIPROTKB|H0YE66 [details] [associations]
symbol:H0YE66 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] [GO:0018342 "protein prenylation" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0008318
GO:GO:0018342 EMBL:AC110275 EMBL:AC113191 Ensembl:ENST00000534420
OMA:PEWNDIS Uniprot:H0YE66
Length = 207
Score = 167 (63.8 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 36/139 (25%), Positives = 72/139 (51%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S+ A +L+ +E N YT W++R++ ++ SL+ L EE+ + + + +
Sbjct: 70 SERAFKLTRDAIELNAANYTVWHFRRVLLK-----------SLQKDLHEEMNYITAIIEE 118
Query: 101 NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDE 160
K+Y WHHR+ +L + EL + D++N+HAW +R++V + ++E
Sbjct: 119 QPKNYQVWHHRR-VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEF-KLWDNE 176
Query: 161 LKYTEDMICNNFSNYSAWH 179
L+Y + ++ + N S W+
Sbjct: 177 LQYVDQLLKEDVRNNSVWN 195
Score = 120 (47.3 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 29/147 (19%), Positives = 61/147 (41%)
Query: 88 DEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRR 147
+ ++ A+ N +Y WH R+ +L + E+ + + +N+ W++RR
Sbjct: 71 ERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRR 130
Query: 148 FVAASMNRSEEDELKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEKVLPDEY 207
V R EL++ D++ + NY AW + + + K+ +E
Sbjct: 131 -VLVEWLRDPSQELEFIADILNQDAKNYHAWQHR------------QWVIQEFKLWDNEL 177
Query: 208 EFVHQAIFTDPDDQSGWFYHLWLLDQT 234
++V Q + D + S W +++ T
Sbjct: 178 QYVDQLLKEDVRNNSVWNQRYFVISNT 204
>RGD|2625 [details] [associations]
symbol:Fnta "farnesyltransferase, CAAX box, alpha" species:10116
"Rattus norvegicus" [GO:0004660 "protein farnesyltransferase
activity" evidence=IEA;ISO;IDA] [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA;IDA] [GO:0004663
"Rab geranylgeranyltransferase activity" evidence=IEA;ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005875 "microtubule associated complex"
evidence=IEA;ISO] [GO:0005953 "CAAX-protein geranylgeranyltransferase
complex" evidence=IDA] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010035 "response to inorganic
substance" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0014070 "response to organic cyclic
compound" evidence=IMP] [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA;ISO]
[GO:0030548 "acetylcholine receptor regulator activity"
evidence=IEA;ISO] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IEA;ISO] [GO:0034097 "response to cytokine stimulus"
evidence=IMP] [GO:0043014 "alpha-tubulin binding" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process" evidence=IMP]
[GO:0045213 "neurotransmitter receptor metabolic process"
evidence=IEA;ISO] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0051770 "positive regulation of nitric-oxide
synthase biosynthetic process" evidence=IMP] [GO:0051771 "negative
regulation of nitric-oxide synthase biosynthetic process"
evidence=IMP] [GO:0090044 "positive regulation of tubulin
deacetylation" evidence=IEA;ISO] [GO:0090045 "positive regulation of
deacetylase activity" evidence=IEA;ISO] [GO:0008144 "drug binding"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0019840 "isoprenoid binding" evidence=IDA] [GO:0042277 "peptide
binding" evidence=IDA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 RGD:2625 GO:GO:0005737 GO:GO:0043066 GO:GO:0008284
GO:GO:0034097 GO:GO:0014070 GO:GO:0010035 GO:GO:0030548 GO:GO:0045213
GO:GO:0045787 GO:GO:0051770 GO:GO:0071340 GO:GO:0051771
eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955 GO:GO:0005953
GO:GO:0004662 GO:GO:0004660 CTD:2339 HOVERGEN:HBG004498
OrthoDB:EOG46DM39 GO:GO:0018342 GO:GO:0004663 EMBL:M81225
IPI:IPI00188070 PIR:A41625 RefSeq:NP_036979.1 UniGene:Rn.5990
PDB:1D8D PDB:1D8E PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7
PDB:1JCR PDB:1JCS PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1N94 PDB:1N95 PDB:1N9A PDB:1NI1 PDB:1NL4
PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ PDB:1QE2 PDB:1S64
PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDB:1X81 PDB:2BED PDB:2FTI PDB:2R2L PDB:2ZIR PDB:2ZIS
PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33 PDB:3E34 PDB:3EU5 PDB:3EUV
PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM PDB:4GTO PDB:4GTP PDB:4GTQ
PDB:4GTR PDBsum:1D8D PDBsum:1D8E PDBsum:1FPP PDBsum:1FT1 PDBsum:1FT2
PDBsum:1FTI PDBsum:1HZ7 PDBsum:1JCR PDBsum:1JCS PDBsum:1KZO
PDBsum:1KZP PDBsum:1KZR PDBsum:1N4P PDBsum:1N4Q PDBsum:1N4R
PDBsum:1N4S PDBsum:1N94 PDBsum:1N95 PDBsum:1N9A PDBsum:1NI1
PDBsum:1NL4 PDBsum:1O1R PDBsum:1O1S PDBsum:1O1T PDBsum:1O5M
PDBsum:1QBQ PDBsum:1QE2 PDBsum:1S64 PDBsum:1SA5 PDBsum:1TN7
PDBsum:1TN8 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU PDBsum:1TNY
PDBsum:1TNZ PDBsum:1X81 PDBsum:2BED PDBsum:2FTI PDBsum:2R2L
PDBsum:2ZIR PDBsum:2ZIS PDBsum:3DPY PDBsum:3E30 PDBsum:3E32
PDBsum:3E33 PDBsum:3E34 PDBsum:3EU5 PDBsum:3EUV PDBsum:3FTI
PDBsum:3KSL PDBsum:3KSQ PDBsum:4GTM PDBsum:4GTO PDBsum:4GTP
PDBsum:4GTQ PDBsum:4GTR ProteinModelPortal:Q04631 SMR:Q04631
DIP:DIP-6131N IntAct:Q04631 MINT:MINT-121907 STRING:Q04631
PhosphoSite:Q04631 PRIDE:Q04631 GeneID:25318 KEGG:rno:25318
UCSC:RGD:2625 InParanoid:Q04631 SABIO-RK:Q04631 BindingDB:Q04631
ChEMBL:CHEMBL4432 EvolutionaryTrace:Q04631 NextBio:606153
ArrayExpress:Q04631 Genevestigator:Q04631
GermOnline:ENSRNOG00000014462 Uniprot:Q04631
Length = 377
Score = 186 (70.5 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 51/205 (24%), Positives = 93/205 (45%)
Query: 22 EKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPD 81
EK R + F S+ A +L+ +E N YT W++R++ ++
Sbjct: 94 EKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLR----------- 142
Query: 82 SLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFH 141
SL+ L EE+ + + + + K+Y WHHR+ +L + EL + D++N+H
Sbjct: 143 SLQKDLQEEMNYIIAIIEEQPKNYQVWHHRR-VLVEWLKDPSQELEFIADILNQDAKNYH 201
Query: 142 AWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEK 201
AW +R++V R ++EL+Y + ++ + N S W+ G+ S
Sbjct: 202 AWQHRQWVIQEF-RLWDNELQYVDQLLKEDVRNNSVWNQRHFVISNTT-----GY-SDRA 254
Query: 202 VLPDEYEFVHQAIFTDPDDQSGWFY 226
VL E ++ + I P ++S W Y
Sbjct: 255 VLEREVQYTLEMIKLVPHNESAWNY 279
>UNIPROTKB|Q04631 [details] [associations]
symbol:Fnta "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
RGD:2625 GO:GO:0005737 GO:GO:0043066 GO:GO:0008284 GO:GO:0034097
GO:GO:0014070 GO:GO:0010035 GO:GO:0030548 GO:GO:0045213
GO:GO:0045787 GO:GO:0051770 GO:GO:0071340 GO:GO:0051771
eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955 GO:GO:0005953
GO:GO:0004662 GO:GO:0004660 CTD:2339 HOVERGEN:HBG004498
OrthoDB:EOG46DM39 GO:GO:0018342 GO:GO:0004663 EMBL:M81225
IPI:IPI00188070 PIR:A41625 RefSeq:NP_036979.1 UniGene:Rn.5990
PDB:1D8D PDB:1D8E PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7
PDB:1JCR PDB:1JCS PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1N94 PDB:1N95 PDB:1N9A PDB:1NI1 PDB:1NL4
PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ PDB:1QE2 PDB:1S64
PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDB:1X81 PDB:2BED PDB:2FTI PDB:2R2L PDB:2ZIR PDB:2ZIS
PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33 PDB:3E34 PDB:3EU5 PDB:3EUV
PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM PDB:4GTO PDB:4GTP PDB:4GTQ
PDB:4GTR PDBsum:1D8D PDBsum:1D8E PDBsum:1FPP PDBsum:1FT1
PDBsum:1FT2 PDBsum:1FTI PDBsum:1HZ7 PDBsum:1JCR PDBsum:1JCS
PDBsum:1KZO PDBsum:1KZP PDBsum:1KZR PDBsum:1N4P PDBsum:1N4Q
PDBsum:1N4R PDBsum:1N4S PDBsum:1N94 PDBsum:1N95 PDBsum:1N9A
PDBsum:1NI1 PDBsum:1NL4 PDBsum:1O1R PDBsum:1O1S PDBsum:1O1T
PDBsum:1O5M PDBsum:1QBQ PDBsum:1QE2 PDBsum:1S64 PDBsum:1SA5
PDBsum:1TN7 PDBsum:1TN8 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU
PDBsum:1TNY PDBsum:1TNZ PDBsum:1X81 PDBsum:2BED PDBsum:2FTI
PDBsum:2R2L PDBsum:2ZIR PDBsum:2ZIS PDBsum:3DPY PDBsum:3E30
PDBsum:3E32 PDBsum:3E33 PDBsum:3E34 PDBsum:3EU5 PDBsum:3EUV
PDBsum:3FTI PDBsum:3KSL PDBsum:3KSQ PDBsum:4GTM PDBsum:4GTO
PDBsum:4GTP PDBsum:4GTQ PDBsum:4GTR ProteinModelPortal:Q04631
SMR:Q04631 DIP:DIP-6131N IntAct:Q04631 MINT:MINT-121907
STRING:Q04631 PhosphoSite:Q04631 PRIDE:Q04631 GeneID:25318
KEGG:rno:25318 UCSC:RGD:2625 InParanoid:Q04631 SABIO-RK:Q04631
BindingDB:Q04631 ChEMBL:CHEMBL4432 EvolutionaryTrace:Q04631
NextBio:606153 ArrayExpress:Q04631 Genevestigator:Q04631
GermOnline:ENSRNOG00000014462 Uniprot:Q04631
Length = 377
Score = 186 (70.5 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 51/205 (24%), Positives = 93/205 (45%)
Query: 22 EKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPD 81
EK R + F S+ A +L+ +E N YT W++R++ ++
Sbjct: 94 EKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLR----------- 142
Query: 82 SLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFH 141
SL+ L EE+ + + + + K+Y WHHR+ +L + EL + D++N+H
Sbjct: 143 SLQKDLQEEMNYIIAIIEEQPKNYQVWHHRR-VLVEWLKDPSQELEFIADILNQDAKNYH 201
Query: 142 AWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEK 201
AW +R++V R ++EL+Y + ++ + N S W+ G+ S
Sbjct: 202 AWQHRQWVIQEF-RLWDNELQYVDQLLKEDVRNNSVWNQRHFVISNTT-----GY-SDRA 254
Query: 202 VLPDEYEFVHQAIFTDPDDQSGWFY 226
VL E ++ + I P ++S W Y
Sbjct: 255 VLEREVQYTLEMIKLVPHNESAWNY 279
>UNIPROTKB|E2RHY8 [details] [associations]
symbol:FNTA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090045 "positive regulation of deacetylase
activity" evidence=IEA] [GO:0090044 "positive regulation of tubulin
deacetylation" evidence=IEA] [GO:0045213 "neurotransmitter receptor
metabolic process" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030548 "acetylcholine receptor
regulator activity" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0030548 GO:GO:0045213 GO:GO:0071340 KO:K05955 CTD:2339
GO:GO:0018342 OMA:HRRFIVE GeneTree:ENSGT00550000074935
GO:GO:0004663 EMBL:AAEX03010368 RefSeq:XP_532786.2
ProteinModelPortal:E2RHY8 Ensembl:ENSCAFT00000008664 GeneID:475566
KEGG:cfa:475566 NextBio:20851380 Uniprot:E2RHY8
Length = 380
Score = 183 (69.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 52/223 (23%), Positives = 99/223 (44%)
Query: 22 EKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPD 81
EK R + F S+ A +L+ +E N YT W++R++ ++
Sbjct: 95 EKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLK----------- 143
Query: 82 SLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFH 141
SL+ L EE+ + + + + K+Y WHHR+ +L + EL + D++N+H
Sbjct: 144 SLQKDLHEEMNYITAIIEEQPKNYQVWHHRR-VLVEWLKDPSQELEFIADILNQDAKNYH 202
Query: 142 AWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEK 201
AW +R++V + ++EL+Y + ++ + N S W+ G+ +
Sbjct: 203 AWQHRQWVIQEF-KLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTT-----GY-NDRA 255
Query: 202 VLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVRVDSPQLVS 244
+L E ++ + I P ++S W Y +L P L+S
Sbjct: 256 ILEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYPNLLS 298
>ZFIN|ZDB-GENE-030131-866 [details] [associations]
symbol:fnta "farnesyltransferase, CAAX box, alpha"
species:7955 "Danio rerio" [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
ZFIN:ZDB-GENE-030131-866 HOGENOM:HOG000188957 KO:K05955
GO:GO:0008318 CTD:2339 HOVERGEN:HBG004498 GO:GO:0018342
GeneTree:ENSGT00550000074935 EMBL:CABZ01069944 EMBL:CABZ01069945
EMBL:BC129222 IPI:IPI00769353 RefSeq:NP_001074029.1
UniGene:Dr.36981 SMR:A1L1V1 Ensembl:ENSDART00000054861
GeneID:555882 KEGG:dre:555882 InParanoid:A1L1V1 NextBio:20881212
Uniprot:A1L1V1
Length = 374
Score = 180 (68.4 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 39/139 (28%), Positives = 74/139 (53%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S+ A L+ + ++ N YT W+YR++ +Q +LK L EE+ + + +
Sbjct: 91 SERAFALTAEAIDLNAANYTVWHYRRVLLQ-----------ALKKDLREEMNYITAIIED 139
Query: 101 NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDE 160
K+Y WHHR+ ++ D EL+ + + D++N+HAW +R++V + + E
Sbjct: 140 QPKNYQVWHHRRMVVEWLSDPAD-ELQFVAEILSQDAKNYHAWQHRQWVIQEY-KLWDGE 197
Query: 161 LKYTEDMICNNFSNYSAWH 179
L+Y E+++ + N SAW+
Sbjct: 198 LEYVEELLEEDVRNNSAWN 216
Score = 172 (65.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 44/143 (30%), Positives = 75/143 (52%)
Query: 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQN 101
+E + T ++E P+ Y W++R++ V+ SDP +EL+ V L Q+
Sbjct: 127 REEMNYITAIIEDQPKNYQVWHHRRMVVEWL-----SDPA-------DELQFVAEILSQD 174
Query: 102 FKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAA-SMNRSE--- 157
K+Y AW HR+W++ + + D EL +++ + D RN AWN R FV + + S+
Sbjct: 175 AKNYHAWQHRQWVIQE-YKLWDGELEYVEELLEEDVRNNSAWNQRHFVISHTSGYSDPAI 233
Query: 158 -EDELKYTEDMICNNFSNYSAWH 179
+ E++YT + I N SAW+
Sbjct: 234 LQREVQYTLEQIKKAPHNESAWN 256
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 52/195 (26%), Positives = 92/195 (47%)
Query: 82 SLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFH 141
+LK L EE+ + + + K+Y WHHR+ ++ D EL+ + + D++N+H
Sbjct: 121 ALKKDLREEMNYITAIIEDQPKNYQVWHHRRMVVEWLSDPAD-ELQFVAEILSQDAKNYH 179
Query: 142 AWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEK 201
AW +R++V + + EL+Y E+++ + N SAW+ G+ S
Sbjct: 180 AWQHRQWVIQEY-KLWDGELEYVEELLEEDVRNNSAWNQRHFVISHTS-----GY-SDPA 232
Query: 202 VLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVRVDSPQLVSSWPTPGSDLILLGDRCL 261
+L E ++ + I P ++S W Y +L D +SS+P ++ L D C
Sbjct: 233 ILQREVQYTLEQIKKAPHNESAWNYLKAILQ-----DGG--LSSYPGLLEQVMELQDTC- 284
Query: 262 DGCASSPF-TRFHLD 275
SSP+ T F +D
Sbjct: 285 ----SSPYLTAFLVD 295
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 36/184 (19%), Positives = 77/184 (41%)
Query: 66 KLAVQHKLTENDSDPDSLKSILDEELR------VVESALRQNFKSYGAWHHRKWILSKGH 119
K+A K T+ D +++L + R + A+ N +Y WH+R+ +L
Sbjct: 67 KIAYSEKFTDVF---DMFRALLKNDERSERAFALTAEAIDLNAANYTVWHYRRVLLQALK 123
Query: 120 SSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWH 179
+ E+ + + +N+ W++RR V ++ DEL++ +++ + NY AW
Sbjct: 124 KDLREEMNYITAIIEDQPKNYQVWHHRRMVVEWLS-DPADELQFVAEILSQDAKNYHAWQ 182
Query: 180 XXXXXXXXXXXXXVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVRVDS 239
+ + + K+ E E+V + + D + S W +++ T
Sbjct: 183 HR------------QWVIQEYKLWDGELEYVEELLEEDVRNNSAWNQRHFVISHTSGYSD 230
Query: 240 PQLV 243
P ++
Sbjct: 231 PAIL 234
>UNIPROTKB|P49354 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9606 "Homo sapiens" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0030548
"acetylcholine receptor regulator activity" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0045213 "neurotransmitter receptor metabolic process"
evidence=IEA] [GO:0004661 "protein geranylgeranyltransferase
activity" evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0018344 "protein geranylgeranylation" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0006921 "cellular component
disassembly involved in execution phase of apoptosis" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0018343 "protein
farnesylation" evidence=IDA] [GO:0004660 "protein
farnesyltransferase activity" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0008017 "microtubule
binding" evidence=IDA] [GO:0090045 "positive regulation of
deacetylase activity" evidence=IDA] [GO:0090044 "positive
regulation of tubulin deacetylation" evidence=IDA]
Reactome:REACT_578 InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0005829 GO:GO:0005875 GO:GO:0007179 GO:GO:0006921
GO:GO:0018343 GO:GO:0008017 GO:GO:0043014 GO:GO:0090045
eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955 GO:GO:0004662
GO:GO:0004660 GO:GO:0018344 CTD:2339 HOVERGEN:HBG004498
OrthoDB:EOG46DM39 OMA:HRRFIVE EMBL:L10413 EMBL:L00634 EMBL:AC110275
EMBL:BT009854 EMBL:AK292121 EMBL:AC113191 EMBL:BC017029
EMBL:BC084566 EMBL:AL698961 IPI:IPI00026813 IPI:IPI00607601
PIR:A47659 RefSeq:NP_002018.1 UniGene:Hs.370312 PDB:1JCQ PDB:1LD7
PDB:1LD8 PDB:1MZC PDB:1S63 PDB:1SA4 PDB:1TN6 PDB:2F0Y PDB:2H6F
PDB:2H6G PDB:2H6H PDB:2H6I PDB:2IEJ PDB:3E37 PDBsum:1JCQ
PDBsum:1LD7 PDBsum:1LD8 PDBsum:1MZC PDBsum:1S63 PDBsum:1SA4
PDBsum:1TN6 PDBsum:2F0Y PDBsum:2H6F PDBsum:2H6G PDBsum:2H6H
PDBsum:2H6I PDBsum:2IEJ PDBsum:3E37 ProteinModelPortal:P49354
SMR:P49354 IntAct:P49354 MINT:MINT-238861 STRING:P49354
PhosphoSite:P49354 DMDM:1346694 PaxDb:P49354 PRIDE:P49354
DNASU:2339 Ensembl:ENST00000302279 Ensembl:ENST00000342116
GeneID:2339 KEGG:hsa:2339 UCSC:uc003xps.3 GeneCards:GC08P042928
HGNC:HGNC:3782 HPA:CAB010149 HPA:HPA018830 MIM:134635
neXtProt:NX_P49354 PharmGKB:PA28199 InParanoid:P49354
PhylomeDB:P49354 BindingDB:P49354 ChEMBL:CHEMBL271
EvolutionaryTrace:P49354 GenomeRNAi:2339 NextBio:9495
PMAP-CutDB:P49354 ArrayExpress:P49354 Bgee:P49354 CleanEx:HS_FNTA
Genevestigator:P49354 GermOnline:ENSG00000168522 GO:GO:0004661
GO:GO:0090044 Uniprot:P49354
Length = 379
Score = 180 (68.4 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 48/204 (23%), Positives = 94/204 (46%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S+ A +L+ +E N YT W++R++ ++ SL+ L EE+ + + + +
Sbjct: 113 SERAFKLTRDAIELNAANYTVWHFRRVLLK-----------SLQKDLHEEMNYITAIIEE 161
Query: 101 NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDE 160
K+Y WHHR+ +L + EL + D++N+HAW +R++V + ++E
Sbjct: 162 QPKNYQVWHHRR-VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEF-KLWDNE 219
Query: 161 LKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEKVLPDEYEFVHQAIFTDPDD 220
L+Y + ++ + N S W+ G+ + VL E ++ + I P +
Sbjct: 220 LQYVDQLLKEDVRNNSVWNQRYFVISNTT-----GY-NDRAVLEREVQYTLEMIKLVPHN 273
Query: 221 QSGWFYHLWLLDQTVRVDSPQLVS 244
+S W Y +L P L++
Sbjct: 274 ESAWNYLKGILQDRGLSKYPNLLN 297
>UNIPROTKB|F1N081 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9913 "Bos taurus" [GO:0090045 "positive regulation of
deacetylase activity" evidence=IEA] [GO:0090044 "positive
regulation of tubulin deacetylation" evidence=IEA] [GO:0045213
"neurotransmitter receptor metabolic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0030548
"acetylcholine receptor regulator activity" evidence=IEA]
[GO:0018343 "protein farnesylation" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0030548
GO:GO:0045213 GO:GO:0071340 KO:K05955 RefSeq:NP_803464.2
UniGene:Bt.407 GeneID:281169 KEGG:bta:281169 CTD:2339
NextBio:20805229 GO:GO:0018342 OMA:HRRFIVE
GeneTree:ENSGT00550000074935 GO:GO:0004663 EMBL:DAAA02060964
IPI:IPI01017544 Ensembl:ENSBTAT00000004159 ArrayExpress:F1N081
Uniprot:F1N081
Length = 375
Score = 179 (68.1 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 47/204 (23%), Positives = 94/204 (46%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S+ A +L+ +E N YT W++R++ ++ SL+ L EE+ + + + +
Sbjct: 109 SERAFKLTRDAIELNAANYTVWHFRRVLLK-----------SLQKDLHEEMNYISAIIEE 157
Query: 101 NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDE 160
K+Y WHHR+ +L + EL + D++N+HAW +R++V + ++E
Sbjct: 158 QPKNYQVWHHRR-VLVEWLRDPSQELEFIADILTQDAKNYHAWQHRQWVIQEF-KLWDNE 215
Query: 161 LKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEKVLPDEYEFVHQAIFTDPDD 220
L+Y + ++ + N S W+ G+ + +L E ++ + I P +
Sbjct: 216 LQYVDQLLKEDVRNNSVWNQRYFVISNTT-----GY-NDRAILEREVQYTLEMIKLVPHN 269
Query: 221 QSGWFYHLWLLDQTVRVDSPQLVS 244
+S W Y +L P L++
Sbjct: 270 ESAWNYLKGILQDRGLSKYPNLLN 293
>UNIPROTKB|P29702 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9913 "Bos taurus" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IEA] [GO:0018342
"protein prenylation" evidence=IEA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 EMBL:M74083 eggNOG:COG5536 HOGENOM:HOG000188957
KO:K05955 GO:GO:0004662 GO:GO:0004660 EMBL:BC112662 IPI:IPI00706713
PIR:A41013 RefSeq:NP_803464.2 UniGene:Bt.407
ProteinModelPortal:P29702 SMR:P29702 STRING:P29702 PRIDE:P29702
GeneID:281169 KEGG:bta:281169 CTD:2339 HOVERGEN:HBG004498
InParanoid:P29702 OrthoDB:EOG46DM39 BindingDB:P29702
ChEMBL:CHEMBL2377 NextBio:20805229 GO:GO:0018342 Uniprot:P29702
Length = 375
Score = 179 (68.1 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 47/204 (23%), Positives = 94/204 (46%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S+ A +L+ +E N YT W++R++ ++ SL+ L EE+ + + + +
Sbjct: 109 SERAFKLTRDAIELNAANYTVWHFRRVLLK-----------SLQKDLHEEMNYISAIIEE 157
Query: 101 NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDE 160
K+Y WHHR+ +L + EL + D++N+HAW +R++V + ++E
Sbjct: 158 QPKNYQVWHHRR-VLVEWLRDPSQELEFIADILTQDAKNYHAWQHRQWVIQEF-KLWDNE 215
Query: 161 LKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEGFVSKEKVLPDEYEFVHQAIFTDPDD 220
L+Y + ++ + N S W+ G+ + +L E ++ + I P +
Sbjct: 216 LQYVDQLLKEDVRNNSVWNQRYFVISNTT-----GY-NDRAILEREVQYTLEMIKLVPHN 269
Query: 221 QSGWFYHLWLLDQTVRVDSPQLVS 244
+S W Y +L P L++
Sbjct: 270 ESAWNYLKGILQDRGLSKYPNLLN 293
>WB|WBGene00019823 [details] [associations]
symbol:fnta-1 species:6239 "Caenorhabditis elegans"
[GO:0008318 "protein prenyltransferase activity" evidence=IEA]
[GO:0018342 "protein prenylation" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0018991
GO:GO:0002119 GO:GO:0010171 GO:GO:0040011 GO:GO:0040035
EMBL:FO081663 eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955
GO:GO:0008318 GO:GO:0018342 OMA:HRRFIVE
GeneTree:ENSGT00550000074935 PIR:T15061 RefSeq:NP_499882.1
HSSP:Q04631 ProteinModelPortal:O44501 SMR:O44501 IntAct:O44501
STRING:O44501 PaxDb:O44501 EnsemblMetazoa:R02D3.5.1
EnsemblMetazoa:R02D3.5.2 GeneID:176840 KEGG:cel:CELE_R02D3.5
UCSC:R02D3.5.1 CTD:176840 WormBase:R02D3.5 InParanoid:O44501
NextBio:894242 Uniprot:O44501
Length = 328
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 40/140 (28%), Positives = 74/140 (52%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S + L + NP YT W YR++ LTE D L +E+R + +++
Sbjct: 59 SDRVMALLEDCIRLNPANYTVWQYRRVC----LTELGWD-------LKKEMRYLSDIIQE 107
Query: 101 NFKSYGAWHHRKWILSK-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEED 159
+ K+Y WHHR++I+ G S++++EL + + +++N+HAW +R++V + E
Sbjct: 108 SPKNYQVWHHRRFIVETIGESAVNDELHFCSEVIRDENKNYHAWQHRQWVVRTFKVPLEK 167
Query: 160 ELKYTEDMICNNFSNYSAWH 179
EL + M+ + N SA++
Sbjct: 168 ELTFALHMLLLDNRNNSAYN 187
Score = 143 (55.4 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 37/143 (25%), Positives = 71/143 (49%)
Query: 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQN 101
K+ + + +++ +P+ Y W++R+ V+ T +S +++EL +R
Sbjct: 95 KKEMRYLSDIIQESPKNYQVWHHRRFIVE---TIGES-------AVNDELHFCSEVIRDE 144
Query: 102 FKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEE--- 158
K+Y AW HR+W++ ++ EL D+RN A+NYR F+ +++E+
Sbjct: 145 NKNYHAWQHRQWVVRTFKVPLEKELTFALHMLLLDNRNNSAYNYRYFLMTLYDKTEDASQ 204
Query: 159 -D-ELKYTEDMICNNFSNYSAWH 179
D E+ + I N +N SAW+
Sbjct: 205 LDIEINLAKKFIENIPNNESAWN 227
Score = 135 (52.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 32/121 (26%), Positives = 64/121 (52%)
Query: 66 KLAVQHKLTENDSDPDS-LKSIL------DEELRVVESALRQNFKSYGAWHHRKWILSKG 118
++AV+ +TE+ +D + ++IL D + ++E +R N +Y W +R+ L++
Sbjct: 31 EVAVKIAVTEDFTDAFAYFRAILIKNEKSDRVMALLEDCIRLNPANYTVWQYRRVCLTEL 90
Query: 119 HSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSE-EDELKYTEDMICNNFSNYSA 177
+ E+R L + +N+ W++RRF+ ++ S DEL + ++I + NY A
Sbjct: 91 GWDLKKEMRYLSDIIQESPKNYQVWHHRRFIVETIGESAVNDELHFCSEVIRDENKNYHA 150
Query: 178 W 178
W
Sbjct: 151 W 151
>UNIPROTKB|O44501 [details] [associations]
symbol:fnta-1 "Protein FNTA-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0009792
GO:GO:0002009 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0040035 EMBL:FO081663
eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955 GO:GO:0008318
GO:GO:0018342 OMA:HRRFIVE GeneTree:ENSGT00550000074935 PIR:T15061
RefSeq:NP_499882.1 HSSP:Q04631 ProteinModelPortal:O44501 SMR:O44501
IntAct:O44501 STRING:O44501 PaxDb:O44501 EnsemblMetazoa:R02D3.5.1
EnsemblMetazoa:R02D3.5.2 GeneID:176840 KEGG:cel:CELE_R02D3.5
UCSC:R02D3.5.1 CTD:176840 WormBase:R02D3.5 InParanoid:O44501
NextBio:894242 Uniprot:O44501
Length = 328
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 40/140 (28%), Positives = 74/140 (52%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S + L + NP YT W YR++ LTE D L +E+R + +++
Sbjct: 59 SDRVMALLEDCIRLNPANYTVWQYRRVC----LTELGWD-------LKKEMRYLSDIIQE 107
Query: 101 NFKSYGAWHHRKWILSK-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEED 159
+ K+Y WHHR++I+ G S++++EL + + +++N+HAW +R++V + E
Sbjct: 108 SPKNYQVWHHRRFIVETIGESAVNDELHFCSEVIRDENKNYHAWQHRQWVVRTFKVPLEK 167
Query: 160 ELKYTEDMICNNFSNYSAWH 179
EL + M+ + N SA++
Sbjct: 168 ELTFALHMLLLDNRNNSAYN 187
Score = 143 (55.4 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 37/143 (25%), Positives = 71/143 (49%)
Query: 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQN 101
K+ + + +++ +P+ Y W++R+ V+ T +S +++EL +R
Sbjct: 95 KKEMRYLSDIIQESPKNYQVWHHRRFIVE---TIGES-------AVNDELHFCSEVIRDE 144
Query: 102 FKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEE--- 158
K+Y AW HR+W++ ++ EL D+RN A+NYR F+ +++E+
Sbjct: 145 NKNYHAWQHRQWVVRTFKVPLEKELTFALHMLLLDNRNNSAYNYRYFLMTLYDKTEDASQ 204
Query: 159 -D-ELKYTEDMICNNFSNYSAWH 179
D E+ + I N +N SAW+
Sbjct: 205 LDIEINLAKKFIENIPNNESAWN 227
Score = 135 (52.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 32/121 (26%), Positives = 64/121 (52%)
Query: 66 KLAVQHKLTENDSDPDS-LKSIL------DEELRVVESALRQNFKSYGAWHHRKWILSKG 118
++AV+ +TE+ +D + ++IL D + ++E +R N +Y W +R+ L++
Sbjct: 31 EVAVKIAVTEDFTDAFAYFRAILIKNEKSDRVMALLEDCIRLNPANYTVWQYRRVCLTEL 90
Query: 119 HSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSE-EDELKYTEDMICNNFSNYSA 177
+ E+R L + +N+ W++RRF+ ++ S DEL + ++I + NY A
Sbjct: 91 GWDLKKEMRYLSDIIQESPKNYQVWHHRRFIVETIGESAVNDELHFCSEVIRDENKNYHA 150
Query: 178 W 178
W
Sbjct: 151 W 151
>DICTYBASE|DDB_G0283053 [details] [associations]
symbol:fntA "protein prenyltransferase alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0018342 "protein
prenylation" evidence=IEA] [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IEA;ISS]
[GO:0018343 "protein farnesylation" evidence=ISS] [GO:0005965
"protein farnesyltransferase complex" evidence=ISS] [GO:0016740
"transferase activity" evidence=IEA] [GO:0004659 "prenyltransferase
activity" evidence=IEA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 dictyBase:DDB_G0283053 GenomeReviews:CM000153_GR
EMBL:AAFI02000049 GO:GO:0018343 eggNOG:COG5536 KO:K05955
GO:GO:0005965 GO:GO:0004662 GO:GO:0004660 RefSeq:XP_639262.1
HSSP:P49354 ProteinModelPortal:Q54RT9 STRING:Q54RT9
EnsemblProtists:DDB0237551 GeneID:8623832 KEGG:ddi:DDB_G0283053
OMA:HRRFIVE ProtClustDB:CLSZ2728981 Uniprot:Q54RT9
Length = 322
Score = 168 (64.2 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 45/187 (24%), Positives = 88/187 (47%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S ++L ++++ NP YT W YR+ + K E D ++++ + +E+ ++
Sbjct: 60 SLRVLDLLEEVIQENPSNYTIWYYRREVL--KAIEQD---ETIEYDIQQEMNLLNDMGET 114
Query: 101 NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDE 160
+ K+Y W+HR++I+ K S + E L D++N+HAW++R+++ + R E
Sbjct: 115 DPKNYQIWNHRRFIVEKYIGSDNKEKEFLSGVLLEDAKNYHAWSHRQWLLKTY-RDWNGE 173
Query: 161 LKYTEDMICNNFSNYSAW-HXXXXXXXXXXXXXVEGFVSKEKVLPDEYEFVHQAIFTDPD 219
L + ++ + N S W H + +E E+ F H I P+
Sbjct: 174 LAMVDKLLSLDHRNNSVWNHRFFVISNLNPSPFPLSLIEREV----EFAFNH--IRHSPN 227
Query: 220 DQSGWFY 226
++S W Y
Sbjct: 228 NESPWSY 234
Score = 127 (49.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 29/105 (27%), Positives = 53/105 (50%)
Query: 83 LKSILDEELRVV---ESALRQNFKSYGAWHHRKWILSKGHSS------IDNELRLLDKFQ 133
LKS ++ LRV+ E +++N +Y W++R+ +L I E+ LL+
Sbjct: 54 LKS-KEKSLRVLDLLEEVIQENPSNYTIWYYRREVLKAIEQDETIEYDIQQEMNLLNDMG 112
Query: 134 KADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAW 178
+ D +N+ WN+RRF+ S+ E ++ ++ + NY AW
Sbjct: 113 ETDPKNYQIWNHRRFIVEKYIGSDNKEKEFLSGVLLEDAKNYHAW 157
>UNIPROTKB|H0YCW1 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9606 "Homo sapiens" [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0008318 GO:GO:0018342 EMBL:AC110275 EMBL:AC113191
HGNC:HGNC:3782 Ensembl:ENST00000531266 Bgee:H0YCW1 Uniprot:H0YCW1
Length = 197
Score = 139 (54.0 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 30/109 (27%), Positives = 57/109 (52%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S+ A +L+ +E N YT W++R++ ++ SL+ L EE+ + + + +
Sbjct: 95 SERAFKLTRDAIELNAANYTVWHFRRVLLK-----------SLQKDLHEEMNYITAIIEE 143
Query: 101 NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFV 149
K+Y WHHR+ +L + EL + D++N+HAW +R++V
Sbjct: 144 QPKNYQVWHHRR-VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWV 191
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 21/91 (23%), Positives = 41/91 (45%)
Query: 88 DEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRR 147
+ ++ A+ N +Y WH R+ +L + E+ + + +N+ W++RR
Sbjct: 96 ERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRR 155
Query: 148 FVAASMNRSEEDELKYTEDMICNNFSNYSAW 178
V R EL++ D++ + NY AW
Sbjct: 156 -VLVEWLRDPSQELEFIADILNQDAKNYHAW 185
>CGD|CAL0005317 [details] [associations]
symbol:RAM2 species:5476 "Candida albicans" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity"
evidence=IGI;IMP;IDA] [GO:0018344 "protein geranylgeranylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005965
"protein farnesyltransferase complex" evidence=IEA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IEA]
[GO:0004661 "protein geranylgeranyltransferase activity"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=IEA] [GO:0007323 "peptide pheromone maturation"
evidence=IEA] [GO:0009405 "pathogenesis" evidence=IEA] [GO:0034411
"cell wall (1->3)-beta-D-glucan biosynthetic process" evidence=IEA]
[GO:0018343 "protein farnesylation" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 CGD:CAL0005317
EMBL:AACQ01000001 EMBL:AACQ01000002 KO:K05955 GO:GO:0004662
GO:GO:0018344 RefSeq:XP_723313.1 RefSeq:XP_723503.1
ProteinModelPortal:Q5APE8 STRING:Q5APE8 GeneID:3634767
GeneID:3634972 KEGG:cal:CaO19.12280 KEGG:cal:CaO19.4817
Uniprot:Q5APE8
Length = 306
Score = 149 (57.5 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 38/131 (29%), Positives = 65/131 (49%)
Query: 55 NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWI 114
N + Y WNYR+L + + N++D D + E ++E+ L + K++ W +RKW+
Sbjct: 99 NEKNYQIWNYRQLIIGQIMELNNNDFDPYR-----EFPILEAMLSSDPKNHHVWSYRKWL 153
Query: 115 LSKGHSSID-NELRLLDKFQKADSRNFHAWNYRRFVAASM-----NRSEEDELKYTEDMI 168
+ D EL +DK D +N AW++R F+ S + + ++EL Y +D I
Sbjct: 154 VDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKI 213
Query: 169 CNNFSNYSAWH 179
N S W+
Sbjct: 214 VKCPQNPSTWN 224
>UNIPROTKB|Q5APE8 [details] [associations]
symbol:RAM2 "Putative uncharacterized protein RAM2"
species:237561 "Candida albicans SC5314" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IGI;IDA] [GO:0018344
"protein geranylgeranylation" evidence=IDA] InterPro:IPR002088
Pfam:PF01239 PROSITE:PS51147 CGD:CAL0005317 EMBL:AACQ01000001
EMBL:AACQ01000002 KO:K05955 GO:GO:0004662 GO:GO:0018344
RefSeq:XP_723313.1 RefSeq:XP_723503.1 ProteinModelPortal:Q5APE8
STRING:Q5APE8 GeneID:3634767 GeneID:3634972 KEGG:cal:CaO19.12280
KEGG:cal:CaO19.4817 Uniprot:Q5APE8
Length = 306
Score = 149 (57.5 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 38/131 (29%), Positives = 65/131 (49%)
Query: 55 NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWI 114
N + Y WNYR+L + + N++D D + E ++E+ L + K++ W +RKW+
Sbjct: 99 NEKNYQIWNYRQLIIGQIMELNNNDFDPYR-----EFPILEAMLSSDPKNHHVWSYRKWL 153
Query: 115 LSKGHSSID-NELRLLDKFQKADSRNFHAWNYRRFVAASM-----NRSEEDELKYTEDMI 168
+ D EL +DK D +N AW++R F+ S + + ++EL Y +D I
Sbjct: 154 VDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKI 213
Query: 169 CNNFSNYSAWH 179
N S W+
Sbjct: 214 VKCPQNPSTWN 224
>GENEDB_PFALCIPARUM|PF14_0403 [details] [associations]
symbol:PF14_0403 "protein prenyltransferase
alpha subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002088
Pfam:PF01239 PROSITE:PS51147 EMBL:AE014187 GO:GO:0018342
GO:GO:0004663 RefSeq:XP_001348577.2 EnsemblProtists:PF14_0403:mRNA
GeneID:811985 KEGG:pfa:PF14_0403 EuPathDB:PlasmoDB:PF3D7_1442500
HOGENOM:HOG000282133 ProtClustDB:CLSZ2431921 Uniprot:Q8IL46
Length = 724
Score = 155 (59.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 47/175 (26%), Positives = 77/175 (44%)
Query: 1 MHGRPRKPLKPEDXXXXXXXXEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYT 60
MHGR + E+ E + ++ + N+ Y KE ++ ++ +L P L T
Sbjct: 1 MHGRRANRAQEEEQARLQKVKELIPLVNNLIKKKKTNN-YDKEYIDRTSLILMKCPYLQT 59
Query: 61 AWNYRK----------LAVQHKLTENDSD----PDSLKSILDEELRVVESALRQNFKSYG 106
WNYR+ L + ++ + D + LK IL +E +VE L K
Sbjct: 60 LWNYRREYFEYIKPEYLKGKKEIEDEKCDMTKTSEELKKILKDENNMVEDILNTFNKCNE 119
Query: 107 AWHHRKWILSKG--HSSID-----NELRLLDKFQKADSRNFHAWNYRRFVAASMN 154
W H+ WI+ G + ID NEL + D RN+H WNYR ++ + ++
Sbjct: 120 LWFHKLWIIKYGLKDNLIDMKDLLNELEYCKRSFYKDDRNYHCWNYRSYIISCIH 174
Score = 43 (20.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 413 LYQLSIKNDNEL----TDFEWRAAT---IAKEIDHFRELLSLINW 450
L L ++ NEL D ++ T I K I+HF E L ++++
Sbjct: 497 LLNLELEQINELLLLENDCKFALYTKFEILKRIEHFEEALKVLDY 541
>UNIPROTKB|Q8IL46 [details] [associations]
symbol:PF14_0403 "Protein prenyltransferase alpha subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004663
"Rab geranylgeranyltransferase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 EMBL:AE014187 GO:GO:0018342 GO:GO:0004663
RefSeq:XP_001348577.2 EnsemblProtists:PF14_0403:mRNA GeneID:811985
KEGG:pfa:PF14_0403 EuPathDB:PlasmoDB:PF3D7_1442500
HOGENOM:HOG000282133 ProtClustDB:CLSZ2431921 Uniprot:Q8IL46
Length = 724
Score = 155 (59.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 47/175 (26%), Positives = 77/175 (44%)
Query: 1 MHGRPRKPLKPEDXXXXXXXXEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYT 60
MHGR + E+ E + ++ + N+ Y KE ++ ++ +L P L T
Sbjct: 1 MHGRRANRAQEEEQARLQKVKELIPLVNNLIKKKKTNN-YDKEYIDRTSLILMKCPYLQT 59
Query: 61 AWNYRK----------LAVQHKLTENDSD----PDSLKSILDEELRVVESALRQNFKSYG 106
WNYR+ L + ++ + D + LK IL +E +VE L K
Sbjct: 60 LWNYRREYFEYIKPEYLKGKKEIEDEKCDMTKTSEELKKILKDENNMVEDILNTFNKCNE 119
Query: 107 AWHHRKWILSKG--HSSID-----NELRLLDKFQKADSRNFHAWNYRRFVAASMN 154
W H+ WI+ G + ID NEL + D RN+H WNYR ++ + ++
Sbjct: 120 LWFHKLWIIKYGLKDNLIDMKDLLNELEYCKRSFYKDDRNYHCWNYRSYIISCIH 174
Score = 43 (20.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 413 LYQLSIKNDNEL----TDFEWRAAT---IAKEIDHFRELLSLINW 450
L L ++ NEL D ++ T I K I+HF E L ++++
Sbjct: 497 LLNLELEQINELLLLENDCKFALYTKFEILKRIEHFEEALKVLDY 541
>UNIPROTKB|G4MNG3 [details] [associations]
symbol:MGG_16220 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
EMBL:CM001231 GO:GO:0008318 GO:GO:0018342 RefSeq:XP_003709689.1
ProteinModelPortal:G4MNG3 EnsemblFungi:MGG_16220T0 GeneID:12985239
KEGG:mgr:MGG_16220 Uniprot:G4MNG3
Length = 509
Score = 144 (55.7 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 39/151 (25%), Positives = 71/151 (47%)
Query: 40 YSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALR 99
YS ++L+ ++ NP YT W YR ++ +L + +E++ + S
Sbjct: 229 YSPRCLKLTEHIISMNPAHYTVWLYRFSIIK-----------ALGLAIPDEIQWLNSVAL 277
Query: 100 QNFKSYGAWHHRKWILSKGHSSI--DNE--LRL-------LDKFQKADSRNFHAWNYRRF 148
Q+ K+Y WHHR ++ + I D E RL + D++N+H W+YR+F
Sbjct: 278 QHLKNYQIWHHRHLLIDNYYPKIADDKEQVARLATSERDFITTMLAEDTKNYHVWSYRQF 337
Query: 149 VAASMNR-SEEDELKYTEDMICNNFSNYSAW 178
+ + + +E + E +I ++ N SAW
Sbjct: 338 LVRRLQAWRDPEERRAVEGLIDDDVRNNSAW 368
>DICTYBASE|DDB_G0287077 [details] [associations]
symbol:DDB_G0287077 "protein prenyltransferase alpha
subunit" species:44689 "Dictyostelium discoideum" [GO:0018342
"protein prenylation" evidence=IEA] [GO:0008318 "protein
prenyltransferase activity" evidence=IEA] InterPro:IPR002088
Pfam:PF01239 PROSITE:PS51147 dictyBase:DDB_G0287077
EMBL:AAFI02000096 GO:GO:0008318 GO:GO:0018342 KO:K14137
eggNOG:NOG120449 RefSeq:XP_637415.1 ProteinModelPortal:Q54KV5
EnsemblProtists:DDB0187271 GeneID:8625947 KEGG:ddi:DDB_G0287077
InParanoid:Q54KV5 OMA:THRWWIL Uniprot:Q54KV5
Length = 406
Score = 110 (43.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 47/218 (21%), Positives = 88/218 (40%)
Query: 32 LHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEEL 91
L H + E ++ + +L N E TA N RK + K ++ +E+
Sbjct: 87 LPERHQQLLVNELLQATRNVLLINAENLTALNLRKELINLKYIKHK-----------DEI 135
Query: 92 RVVESALRQNFKSYGAWHHRKWILS----KGHSSIDNELRLLDKFQKAD--SRNFHAWNY 145
++ ++ KS W HRKW+++ K +D E+ L + A+ +N+++W +
Sbjct: 136 SLLNLIFTKHPKSGEGWAHRKWVITDYFKKTGDYLDYEIELAVCKRVAEIYPKNYYSWTH 195
Query: 146 RRFVAASMNRSEE-DELKYTEDMICNNFSNYSAWHXXXXXXXXXXXXXVEG--------F 196
R ++ ++ +L+ ED + N S+Y +H
Sbjct: 196 RWWILQHLSVDIILKDLETMEDWVKRNISDYCGYHHRYLILTHLFNKCYNSNDDNNNNES 255
Query: 197 VSKE--------KVLPDEYEFVHQAIFTDPDDQSGWFY 226
S+E K+ DE+ F+H+ I P +S W Y
Sbjct: 256 KSEENSNEMKIHKLWEDEFNFIHKIINLYPGHESSWSY 293
Score = 63 (27.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 31/136 (22%), Positives = 57/136 (41%)
Query: 201 KVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVRVDSP---QLVSSWPTPGSDL---I 254
K+ DE+ F+H+ I P +S W Y L +++ P Q S P + L
Sbjct: 268 KLWEDEFNFIHKIINLYPGHESSWSYKRVLTLFWLQIAQPIVFQRNISTTVPITSLQQES 327
Query: 255 LLGDRCLDGCASSPFTRFHLDSRTFPLVLYFNQAVEGVNSSTITVDSELNTNKDLVWKPL 314
D L+ SS + + ++ + L +Y + + + S I +D ++ N ++ L
Sbjct: 328 QFVDSILEDIDSSYYEQQKSFAQRYLLSIYELKFKDSADFS-IDID-QVKNNYSIIINDL 385
Query: 315 SSCNSKAAQVWVTQLN 330
+VW +LN
Sbjct: 386 KISFPNQLKVWEYKLN 401
>FB|FBgn0027296 [details] [associations]
symbol:l(1)G0144 "lethal (1) G0144" species:7227 "Drosophila
melanogaster" [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISS] [GO:0005968 "Rab-protein geranylgeranyltransferase
complex" evidence=ISS] [GO:0018342 "protein prenylation"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
EMBL:AE014298 GO:GO:0018342 GO:GO:0004663
GeneTree:ENSGT00390000017892 KO:K14137 eggNOG:NOG120449
EMBL:AY069689 RefSeq:NP_569992.1 UniGene:Dm.2001 SMR:Q9W501
MINT:MINT-882683 EnsemblMetazoa:FBtr0070414 GeneID:31212
KEGG:dme:Dmel_CG3073 UCSC:CG3073-RA FlyBase:FBgn0027296
InParanoid:Q9W501 OMA:AYRRWLY OrthoDB:EOG402V85 GenomeRNAi:31212
NextBio:772477 Uniprot:Q9W501
Length = 398
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 37/136 (27%), Positives = 71/136 (52%)
Query: 47 LSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYG 106
L+ LL NP++ T W+ R+ VQ +N + +++EL+ L KS
Sbjct: 99 LNVALL-INPDVTTFWHIRRQLVQ----KN-------RLSINKELQFSALVLSIKPKSNE 146
Query: 107 AWHHRKWILS-KGHSSID--NELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKY 163
A+ +R+W+ S + +ID NE+ + ++ + N+HAW++R+++ + + EL
Sbjct: 147 AFAYRRWLYSFQSADAIDWPNEIGICERAADRCASNYHAWSHRQWILQNGPCLLQSELLR 206
Query: 164 TEDMICNNFSNYSAWH 179
TE + + S+YS +H
Sbjct: 207 TEKFMRKHISDYSCYH 222
>UNIPROTKB|E9PPM9 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9606 "Homo sapiens" [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] [GO:0030548 "acetylcholine receptor regulator
activity" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0045213 "neurotransmitter receptor
metabolic process" evidence=IEA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 GO:GO:0008318 GO:GO:0018342 EMBL:AC110275
EMBL:AC113191 HGNC:HGNC:3782 IPI:IPI01014486
ProteinModelPortal:E9PPM9 SMR:E9PPM9 Ensembl:ENST00000525699
ArrayExpress:E9PPM9 Bgee:E9PPM9 Uniprot:E9PPM9
Length = 60
Score = 95 (38.5 bits), Expect = 0.00057, P = 0.00057
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 91 LRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFV 149
+ + + + + K+Y WHHR+ +L + EL + D++N+HAW +R++V
Sbjct: 1 MNYITAIIEEQPKNYQVWHHRR-VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWV 58
Score = 95 (38.5 bits), Expect = 0.00057, P = 0.00057
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 49 TKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAW 108
T ++E P+ Y W++R++ V+ DP +EL + L Q+ K+Y AW
Sbjct: 5 TAIIEEQPKNYQVWHHRRVLVEWL-----RDPS-------QELEFIADILNQDAKNYHAW 52
Query: 109 HHRKWIL 115
HR+W++
Sbjct: 53 QHRQWVI 59
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 450 429 0.00085 118 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 44
No. of states in DFA: 629 (67 KB)
Total size of DFA: 315 KB (2158 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.72u 0.09s 37.81t Elapsed: 00:00:01
Total cpu time: 37.73u 0.09s 37.82t Elapsed: 00:00:01
Start: Mon May 20 19:53:14 2013 End: Mon May 20 19:53:15 2013