BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013049
(450 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224064265|ref|XP_002301412.1| predicted protein [Populus trichocarpa]
gi|222843138|gb|EEE80685.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/451 (54%), Positives = 331/451 (73%), Gaps = 18/451 (3%)
Query: 8 RIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLSTTES-- 65
+I++TV+++LK++ M+E+TEFKVR A+ERL DLS HK+FIRGV+ESFLLST +
Sbjct: 2 KIQETVIDILKHASMDEITEFKVRATATERLDFDLSHIEHKKFIRGVIESFLLSTMDEEG 61
Query: 66 --TDNRIEPD----LEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIRE 119
+ + D L+ E + K + DG+ +ICKLS +R+V IQEFKG++FVSIR+
Sbjct: 62 KEANGNVREDTKEALQEEHEEVLTKKEVGTDGNRVICKLSERRSVTIQEFKGKSFVSIRD 121
Query: 120 YFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQS--KLRSESSGEQNKDVANS 177
++++DG L+P+ GI LTSEQW A +++PAI+EA+ KMQS L E +G+ +K VA+S
Sbjct: 122 FYQKDGNLLPSKIGICLTSEQWTAIKQNVPAIEEAIAKMQSISGLDVEQNGQISKPVADS 181
Query: 178 MTS--PLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEV 235
++ PLE+ E+ RF+GKNY+ WA Q+E LKQLK+ YVLT P P + P AS+EE+
Sbjct: 182 ISQELPLEISRIEVSRFDGKNYQFWAPQMEFFLKQLKIVYVLTVPRPSIATSPPASAEEI 241
Query: 236 TRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKR 295
+ KA E+KW ND+++CR +ILN LSD +YY+Y+K+ +AKELWE+LKLVYL EEFGTKR
Sbjct: 242 AQAKATEQKWCNDDHLCRLNILNSLSDSIYYKYAKKIKTAKELWEDLKLVYLYEEFGTKR 301
Query: 296 SQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCI 355
SQVKKYIEFQM DEKS+F+Q ELN IAD+IVAAGM I ENFHVS ++SKLP SWKDFC+
Sbjct: 302 SQVKKYIEFQMVDEKSIFDQLQELNGIADAIVAAGMFIDENFHVSTVISKLPPSWKDFCM 361
Query: 356 KLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSK-----KR 410
KLM EYL F +LMD ++AEEESR+ +K EPS V GPR+R+M K KR
Sbjct: 362 KLMHEEYLPFWILMDRVRAEEESRNQDKLGEPSNHVHSHHPKYLGPRIRDMKKPGLHWKR 421
Query: 411 RESEMD-SKTVVCYNCRKKGHVAKHCHNKRL 440
R+ E+D +K++ CY C KKGH++KHC +K+
Sbjct: 422 RDIEVDNNKSLTCYFCGKKGHISKHCPDKKF 452
>gi|356571246|ref|XP_003553790.1| PREDICTED: uncharacterized protein LOC100800963 [Glycine max]
Length = 515
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/497 (46%), Positives = 309/497 (62%), Gaps = 65/497 (13%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
MET ++ + V+++LK S++EE TEF +RV ASERLGIDLSD+ + F+R VVES+LL
Sbjct: 1 METETRRKVEEMVLDILKKSNIEEATEFTIRVAASERLGIDLSDSPSRHFVRTVVESYLL 60
Query: 61 STTESTDNRIEPDLEVEEQR---------------AQIGKRINDDGDSIICKLSNKRTVA 105
S N I D E +E + K DD + +IC+LS++R +A
Sbjct: 61 SVAA---NEISKDAEKKENEDIAAKNDDDVKKGDVVAVPKLKRDDPERVICQLSSRRNLA 117
Query: 106 IQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKLRSE 165
++ FKG VSIRE++ +DGKL+P +KGI+L+SEQW F KS+PAI+EA+ KM+ ++R E
Sbjct: 118 VKHFKGTTLVSIREFYMKDGKLLPGSKGISLSSEQWSTFKKSVPAIEEAIKKMEGRIRLE 177
Query: 166 SSGEQNKDVANSMT---------------------SPLE--------------------- 183
+G+QN D +NS +PLE
Sbjct: 178 PNGKQNGDASNSAVDVALEPNGKQNGDASNSVVDVAPLEPHGKQNGDASNSVVDVAALEP 237
Query: 184 LFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAER 243
+ P E+ R +GKN++ WA+Q+ELLLKQLKV YVL +PCP TL A +E++ KAAER
Sbjct: 238 VVPIEVIRLDGKNFQSWARQMELLLKQLKVDYVLDEPCPNPTLGESAKAEDIATAKAAER 297
Query: 244 KWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIE 303
+WLND+ C +IL+ LSD LY Y+ R SAK+LWEELKLVYL EEFGTKR VKKY+E
Sbjct: 298 RWLNDDLTCHRNILSHLSDPLYNLYANRKLSAKDLWEELKLVYLYEEFGTKRYHVKKYLE 357
Query: 304 FQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYL 363
FQM +EK+V EQ ELN +ADSI AAGM I +NFHVS I+SKLP SWKDFCIKLMR EYL
Sbjct: 358 FQMVEEKAVIEQIRELNGMADSIAAAGMFIDDNFHVSAIISKLPPSWKDFCIKLMREEYL 417
Query: 364 TFTMLMDHIKAEEESRSHNKQ--EEPSKFVELSPAVNFGPR---MREMSKKRRESEMDSK 418
+ LM+ I+ EEE R K+ E + A N G R + + R SE++++
Sbjct: 418 PYRKLMERIQIEEEYRYGVKRVVEHSNSMEGYHQAYNGGHRRADYKPLGMCRNRSEINAR 477
Query: 419 TVVCYNCRKKGHVAKHC 435
+V C C K+GH++KHC
Sbjct: 478 SVPCSVCGKRGHLSKHC 494
>gi|356504175|ref|XP_003520874.1| PREDICTED: uncharacterized protein LOC100818901 [Glycine max]
Length = 558
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 235/533 (44%), Positives = 312/533 (58%), Gaps = 103/533 (19%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
ME ++ + V+++LK S+++E TEF +RV ASERLGIDLSD K F+R VVESFLL
Sbjct: 1 MEAETRRKVEEMVLDILKKSNIKEATEFTIRVAASERLGIDLSDTASKHFVRSVVESFLL 60
Query: 61 S-------------------TTESTDNRIEPDLEV---EEQRAQ--IGKRINDDGDSIIC 96
S ++ D + D+ V EE R + K DD + +IC
Sbjct: 61 SVAANEKSKDAEKKKENEDIAAKNDDVAKKEDVVVANEEESRETEVLPKLKRDDPERVIC 120
Query: 97 KLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVV 156
LSN+R VA+++FKG VSIRE++ +DGK +P +KGI+L+SEQW F KS+PAI+EA+
Sbjct: 121 HLSNRRNVAVKDFKGTTLVSIREFYMKDGKPLPGSKGISLSSEQWSTFKKSVPAIEEAIK 180
Query: 157 KMQSKLRSESSGEQNKD----------------------------------------VAN 176
KM+ ++ SE +G+QN D +N
Sbjct: 181 KMEERIGSEPNGKQNGDVSNSVVDVAYLEPNSKQKGDASNSVVDVATLEPHGKQNGDASN 240
Query: 177 SM--TSPLE---------------------LFPTELHRFNGKNYRVWAQQIELLLKQLKV 213
S+ +PLE + P E+ RF+GKN++ WA Q+ELLLKQLK+
Sbjct: 241 SVVDVAPLEPHGKQNGDASNSVVDVAPLEPVVPIEVIRFDGKNFQFWAPQMELLLKQLKI 300
Query: 214 AYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTS 273
YVL +PCP TL A +E++ KAAER+WLND+ C+ +IL+ LSD LY Y+ R
Sbjct: 301 DYVLDEPCPNPTLGKSAKAEDIAATKAAERRWLNDDLTCQRNILSHLSDPLYNLYANRKM 360
Query: 274 SAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMI 333
SAK+LWEELKLVYL EEFGTKRSQVKKY+EFQM +EK+V EQ ELN IADSI AAG+ I
Sbjct: 361 SAKDLWEELKLVYLYEEFGTKRSQVKKYLEFQMVEEKAVIEQIRELNGIADSIAAAGIFI 420
Query: 334 YENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVEL 393
+NFHVS I+SKLP SWKDFCIKLMR EYL + LM+ I+ EEE R K + VE
Sbjct: 421 DDNFHVSAIISKLPPSWKDFCIKLMREEYLPYRKLMERIQIEEEYRYGVK-----RVVEY 475
Query: 394 S-------PAVNFGPRMRE----MSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
S A G R + + R E+ +++V C C K+GH++KHC
Sbjct: 476 SYSMGGYHQAYKGGHRRADYKPALGMCRNRPEIIARSVPCTVCGKRGHLSKHC 528
>gi|449433026|ref|XP_004134299.1| PREDICTED: uncharacterized protein LOC101205072 [Cucumis sativus]
Length = 468
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/466 (45%), Positives = 300/466 (64%), Gaps = 39/466 (8%)
Query: 8 RIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLSTTE--- 64
RI + V+EVLK S ME+ TEFKVR + ERLGIDLS+ K +R VVESFLLS +E
Sbjct: 8 RIEENVIEVLKKSSMEDTTEFKVRSQVEERLGIDLSNKQCKLLVRNVVESFLLSMSERVC 67
Query: 65 -STDNRIEPDLEVE----EQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIRE 119
++ P + E EQ+ K NDDGD +IC+LSN R+V I +FKG VS+R+
Sbjct: 68 MGKEDEPGPSVRYENKAVEQKIVPKKEFNDDGDLLICRLSNNRSVTIHKFKGAPMVSVRQ 127
Query: 120 YFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKLRSESSGEQNKDVANS-- 177
Y+ +DGK +PT KGI++ +EQW F ++PAI EA+++M+ RSE E+ +N
Sbjct: 128 YYEKDGKQLPTLKGISMPTEQWSVFKSNIPAIAEAILQMKRNKRSEHDAEKIGAFSNPTT 187
Query: 178 -MTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVT 236
+TSP +P E RF+GKNY WA Q+ELLL+ LK+AYVL++ CP L ++SS
Sbjct: 188 RVTSPK--YPIETIRFDGKNYNAWAHQMELLLQDLKIAYVLSNQCPTAVLGEESSSGNAA 245
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRS 296
+ KAAE+KW+ D+++CR +ILN LSD L+ +YSK+T SA ELW+ELKL+YL EEFGTKRS
Sbjct: 246 QSKAAEQKWMRDDHMCRRNILNSLSDRLFNEYSKKTMSASELWKELKLLYLLEEFGTKRS 305
Query: 297 QVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIK 356
QVKKY+EF+M +EKS+ EQ ELN IADSI ++G +I E+FHVS I+SKLPLSWK+ +
Sbjct: 306 QVKKYLEFKMVEEKSILEQVEELNHIADSIGSSGTVIDEDFHVSAIISKLPLSWKNVWVN 365
Query: 357 LMRMEYLTFTMLMDHIKAEEESRS------------------HNKQEEPSKFVELSPAVN 398
LM +YL L D ++ EE+ R+ H+ PSK + P
Sbjct: 366 LMHEQYLPLRKLTDRLRIEEQLRTQKNSRLSGVSSSPTPRGQHHAANHPSKMGDPKPVT- 424
Query: 399 FGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEI 444
+ +++E + + KT++C +C K+GH + +C K+++ E+
Sbjct: 425 -------VPLRKKECQKEVKTLLCLDCGKEGHTSPNCPTKKVNNEV 463
>gi|449478205|ref|XP_004155250.1| PREDICTED: uncharacterized LOC101205072 [Cucumis sativus]
Length = 468
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/466 (45%), Positives = 300/466 (64%), Gaps = 39/466 (8%)
Query: 8 RIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLSTTEST- 66
RI + V+EVLK S ME+ TEFKVR + ERLGIDLS+ K +R VVESFLLS +E
Sbjct: 8 RIEENVIEVLKKSSMEDTTEFKVRSQVEERLGIDLSNKQCKLLVRNVVESFLLSMSERVC 67
Query: 67 ---DNRIEPDLEVE----EQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIRE 119
++ P + E EQ+ K NDDGD +IC+LSN R+V I +FKG VS+R+
Sbjct: 68 MWKEDEPGPSVRYENKAVEQKIVPKKEFNDDGDLLICRLSNNRSVTIHKFKGAPMVSVRQ 127
Query: 120 YFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKLRSESSGEQNKDVANS-- 177
Y+ +DGK +PT KGI++ +EQW F ++PAI EA+++M+ RSE E+ +N
Sbjct: 128 YYEKDGKQLPTLKGISMPTEQWSVFKSNIPAIAEAILQMKRNKRSEHDAEKIDAFSNPTT 187
Query: 178 -MTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVT 236
+TSP +P E RF+GKNY WA Q+ELLL+ LK+AYVL++ CP L ++SS
Sbjct: 188 RVTSPK--YPIETIRFDGKNYNAWAHQMELLLQDLKIAYVLSNQCPTAVLGEESSSGNAA 245
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRS 296
+ KAAE+KW+ D+++CR +ILN LSD L+ +YSK+T SA ELW+ELKL+YL EEFGTKRS
Sbjct: 246 QSKAAEQKWMRDDHMCRRNILNSLSDRLFNEYSKKTMSASELWKELKLLYLLEEFGTKRS 305
Query: 297 QVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIK 356
QVKKY+EF+M +EKS+ EQ ELN IADSI ++G +I E+FHVS I+SKLPLSWK+ +
Sbjct: 306 QVKKYLEFKMVEEKSILEQVEELNHIADSIGSSGTVIDEDFHVSAIISKLPLSWKNVWVN 365
Query: 357 LMRMEYLTFTMLMDHIKAEEESRS------------------HNKQEEPSKFVELSPAVN 398
LM +YL L D ++ EE+ R+ H+ PSK + P
Sbjct: 366 LMHEQYLPLRKLTDRLRIEEQLRTQKNSRLSGVSSSPTPRGQHHAANHPSKMGDPKPVT- 424
Query: 399 FGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEI 444
+ +++E + + KT++C +C K+GH + +C K+++ E+
Sbjct: 425 -------VPLRKKECQKEVKTLLCLDCGKEGHTSPNCPTKKVNNEV 463
>gi|30678785|ref|NP_567205.2| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
gi|26451026|dbj|BAC42619.1| unknown protein [Arabidopsis thaliana]
gi|29028884|gb|AAO64821.1| At4g00980 [Arabidopsis thaliana]
gi|332656563|gb|AEE81963.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
Length = 488
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/452 (41%), Positives = 275/452 (60%), Gaps = 21/452 (4%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
ME V +I +TV +L SDM++MTEFK+R++AS +LGIDLS NHK+ +R V+E FLL
Sbjct: 12 MEIVATQKIEETVKSILSESDMDQMTEFKLRLDASAKLGIDLSGTNHKKLVRDVLEVFLL 71
Query: 61 STTESTDNRIEPDLEVEEQRAQI---GKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSI 117
ST + P+ + + + + + ICKLS K+ +Q ++G+ F+SI
Sbjct: 72 STP---GEALVPETVAPAKNETVSVAAASVGGEDERFICKLSEKQNATVQRYRGQPFLSI 128
Query: 118 REYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKLRSESSGEQNKDVANS 177
+ GK +G L++ QW K+ AI++ + + QSKL+SE++ + A
Sbjct: 129 GS--QEHGKAF---RGAHLSTNQWSVIKKNFAAIEDGIKQCQSKLKSEAARNGDTSEAVD 183
Query: 178 MTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIV--TLCPQASSEEV 235
S ++ RF+GK+Y WA Q+EL LKQLK+ YVL++PCP + + P+ + E+
Sbjct: 184 KDSSHGFSVIKISRFDGKSYLYWASQMELFLKQLKLTYVLSEPCPSIGSSQGPETNPREI 243
Query: 236 TRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKR 295
TR A +KWL D+ +C H++N LSDHLY +YS++ AKELW+ELK VY +E +KR
Sbjct: 244 TRADATGKKWLRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCDESKSKR 303
Query: 296 SQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCI 355
SQV+KYIEF+M +E+ + EQ NKIADSIV+AGM + E FHVS I+SK P SW+ FC
Sbjct: 304 SQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPSWRGFCT 363
Query: 356 KLMRMEYLTFTMLMDHIKAEEESRSHN------KQEEPSKFVELSPAVNFGPRMRE-MSK 408
+LM EYL MLM+ +KAEEE + + S +E +P++ R + +
Sbjct: 364 RLMEEEYLPVWMLMERVKAEEELLRNGAKGVTYRPATGSSQMERTPSLGTTHRGSQSVGW 423
Query: 409 KRRESEMDSKT-VVCYNCRKKGHVAKHCHNKR 439
KR+E E D + +VC NC +KGH+AKHC +
Sbjct: 424 KRKEPERDERVIIVCDNCGRKGHLAKHCWGSK 455
>gi|2252849|gb|AAB62847.1| contains similarity to gag proteins [Arabidopsis thaliana]
gi|7267595|emb|CAB80907.1| AT4g00980 [Arabidopsis thaliana]
Length = 462
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 259/449 (57%), Gaps = 41/449 (9%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
ME V +I +TV +L SDM++MTEFK+R++AS +LGIDLS NHK+ +R V+E FLL
Sbjct: 12 MEIVATQKIEETVKSILSESDMDQMTEFKLRLDASAKLGIDLSGTNHKKLVRDVLEVFLL 71
Query: 61 STTESTDNRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREY 120
ST + P+ + + +VA G E
Sbjct: 72 STP---GEALVPETVAPAKNETV-------------------SVAAASVGGE-----DER 104
Query: 121 FRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKLRSESSGEQNKDVANSMTS 180
F V + G L++ QW K+ AI++ + + QSKL+SE++ + A S
Sbjct: 105 F----IYVSSLSGAHLSTNQWSVIKKNFAAIEDGIKQCQSKLKSEAARNGDTSEAVDKDS 160
Query: 181 PLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIV--TLCPQASSEEVTRV 238
++ RF+GK+Y WA Q+EL LKQLK+ YVL++PCP + + P+ + E+TR
Sbjct: 161 SHGFSVIKISRFDGKSYLYWASQMELFLKQLKLTYVLSEPCPSIGSSQGPETNPREITRA 220
Query: 239 KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
A +KWL D+ +C H++N LSDHLY +YS++ AKELW+ELK VY +E +KRSQV
Sbjct: 221 DATGKKWLRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCDESKSKRSQV 280
Query: 299 KKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLM 358
+KYIEF+M +E+ + EQ NKIADSIV+AGM + E FHVS I+SK P SW+ FC +LM
Sbjct: 281 RKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPSWRGFCTRLM 340
Query: 359 RMEYLTFTMLMDHIKAEEESRSHN------KQEEPSKFVELSPAVNFGPRMRE-MSKKRR 411
EYL MLM+ +KAEEE + + S +E +P++ R + + KR+
Sbjct: 341 EEEYLPVWMLMERVKAEEELLRNGAKGVTYRPATGSSQMERTPSLGTTHRGSQSVGWKRK 400
Query: 412 ESEMDSKT-VVCYNCRKKGHVAKHCHNKR 439
E E D + +VC NC +KGH+AKHC +
Sbjct: 401 EPERDERVIIVCDNCGRKGHLAKHCWGSK 429
>gi|16610191|emb|CAD10638.1| PBF68 protein [Nicotiana tabacum]
Length = 594
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 155/252 (61%), Gaps = 34/252 (13%)
Query: 184 LFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAER 243
L P + R +GKNY W Q E LKQL +AYVL++PCP +
Sbjct: 291 LVPVKTIRLDGKNYYCWKHQAEFFLKQLNIAYVLSEPCP--------------NTLENRQ 336
Query: 244 KWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIE 303
KW++D+ +C H+ILN LSD L+ +YSK+ SAKELWEEL+ Y DE+FGTK S+V KY++
Sbjct: 337 KWVDDDYLCCHNILNSLSDKLFEEYSKKNYSAKELWEELRSTY-DEDFGTKSSEVNKYLQ 395
Query: 304 FQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYL 363
F M D S+ EQ EL+KIADS++A+G+ I ENFH+S I++KLP SWKD +LM
Sbjct: 396 FLMVDGISILEQVQELHKIADSLMASGIWIDENFHISAIIAKLPPSWKDCRTRLMHENVP 455
Query: 364 TFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCY 423
+ MLM H++ E++ R+ + ++ K V G R +++SKK+ CY
Sbjct: 456 SLDMLMHHLRVEDDCRNRYRNDKHEKRV--------GARKKDLSKKQ-----------CY 496
Query: 424 NCRKKGHVAKHC 435
NC K+GH++K+C
Sbjct: 497 NCGKEGHISKYC 508
>gi|50253454|gb|AAT71929.1| At3g43510 [Arabidopsis thaliana]
gi|52627129|gb|AAU84691.1| At3g43510 [Arabidopsis thaliana]
Length = 409
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 183/334 (54%), Gaps = 30/334 (8%)
Query: 94 IICKLSNKRTVAIQEFKGRAFVSI-REYFRR--DGKLVPTAKGIALTSEQWRAFSKSLPA 150
+ K S + V + +++G+ + I +++ R+ D K +GI+ + QW F K+ A
Sbjct: 63 FLYKFSETKDVMVNKYQGKTSLLIGKKHVRKEKDAKF----RGISFPTHQWSVFKKNFSA 118
Query: 151 IDEAVVKMQSKLRSESSGE-QNKDVANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLK 209
+EA+ Q K + + + D +S T L E RF+G++Y WA ++EL LK
Sbjct: 119 TEEAIKHFQLKNTTPNGNACEALDTRSSSTHGFSLI--ETWRFDGRSYLSWASEMELFLK 176
Query: 210 QLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYS 269
Q+K+AYVL++P P + + + WL D+ +C +H++ LSD LY QY
Sbjct: 177 QMKLAYVLSEPYPGIG-------------SGSSQDWLRDDYLCHNHLMKSLSDDLYRQYL 223
Query: 270 KRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAA 329
KR AKELWEELK VY EE +K QV+KYI+F+M +E+ V EQ E KIADSIV A
Sbjct: 224 KRFKHAKELWEELKWVYRREESNSKMVQVRKYIDFKMVEERPVLEQVQEFIKIADSIVGA 283
Query: 330 GMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSK 389
GM++ E F+VS I+SK P SW F +LM E+LT ML++ +KAEEE K+
Sbjct: 284 GMVLDETFYVSTIISKFPSSWSGFVTRLMEEEFLTVCMLVERLKAEEEFLRSGKKRVTVS 343
Query: 390 FVELSPAVNFGPRMREM-------SKKRRESEMD 416
S + P + M S KR+E E D
Sbjct: 344 AATGSSQIEMRPSLGTMHTGSQSVSSKRKEPERD 377
>gi|7288029|emb|CAB81791.1| putative protein [Arabidopsis thaliana]
Length = 421
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 182/345 (52%), Gaps = 40/345 (11%)
Query: 94 IICKLSNKRTVAIQEFKGRAFVSI-REYFRR--DGKLVPTAK------------GIALTS 138
+ K S + V + +++G+ + I +++ R+ D K T GI+ +
Sbjct: 63 FLYKFSETKDVMVNKYQGKTSLLIGKKHVRKEKDAKFRATLVNDEKAFMLCSLLGISFPT 122
Query: 139 EQWRAFSKSLPAIDEAVVKMQSKLRSESSGEQNKDVANSMTSPLELFPTELHRFNGKNYR 198
QW F K+ A +EA+ Q+ + + D +S T L E RF+G++Y
Sbjct: 123 HQWSVFKKNFSATEEAIKHFQT---PNGNACEALDTRSSSTHGFSLI--ETWRFDGRSYL 177
Query: 199 VWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHHILN 258
WA ++EL LKQ+K+AYVL++P P + + + WL D+ +C +H++
Sbjct: 178 SWASEMELFLKQMKLAYVLSEPYPGIG-------------SGSSQDWLRDDYLCHNHLMK 224
Query: 259 FLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALE 318
LSD LY QY KR AKELWEELK VY EE +K QV+KYI+F+M +E+ V EQ E
Sbjct: 225 SLSDDLYRQYLKRFKHAKELWEELKWVYRREESNSKMVQVRKYIDFKMVEERPVLEQVQE 284
Query: 319 LNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKAEEES 378
KIADSIV AGM++ E F+VS I+SK P SW F +LM E+LT ML++ +KAEEE
Sbjct: 285 FIKIADSIVGAGMVLDETFYVSTIISKFPSSWSGFVTRLMEEEFLTVCMLVERLKAEEEF 344
Query: 379 RSHNKQEEPSKFVELSPAVNFGPRMREM-------SKKRRESEMD 416
K+ S + P + M S KR+E E D
Sbjct: 345 LRSGKKRVTVSAATGSSQIEMRPSLGTMHTGSQSVSSKRKEPERD 389
>gi|13699910|dbj|BAB41214.1| putative transcriptional coactivator [Brassica rapa]
Length = 165
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 126/165 (76%), Gaps = 3/165 (1%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFL- 59
ME ++ +I +TV E+LK SDM EMTEFKVR ASERLGIDLSD +HK F+RG+V+SFL
Sbjct: 1 MEEESKAKIEETVREILKESDMTEMTEFKVRNLASERLGIDLSDKSHKAFVRGIVKSFLE 60
Query: 60 -LSTTESTDNRIEPDLEVEEQRAQIG-KRINDDGDSIICKLSNKRTVAIQEFKGRAFVSI 117
+ + + E + E EE+RA+ G K +DDGD IIC+LS+KR V IQEF+G++ VSI
Sbjct: 61 EVESKQQQQQDKEEEEEEEEERAKEGNKEFDDDGDLIICRLSDKRRVTIQEFRGKSLVSI 120
Query: 118 REYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKL 162
REY+++DGK +P++KGI+LT EQW F K++PAI+ AV KM+S++
Sbjct: 121 REYYKKDGKELPSSKGISLTDEQWSTFKKNIPAIEAAVKKMESRV 165
>gi|297742357|emb|CBI34506.3| unnamed protein product [Vitis vinifera]
Length = 142
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 116/162 (71%), Gaps = 21/162 (12%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
ME RI +TV+E+LK++DM+EMTEFKVR AS++LGI+LS ++KRF+R VVE+FL
Sbjct: 1 MEPETRRRIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFLH 60
Query: 61 STTESTDNRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREY 120
S + D DDGD IIC+LS++R V IQ+F+G+ VSIRE+
Sbjct: 61 SGVKEYD---------------------DDGDLIICRLSDRRRVTIQDFRGKTLVSIREF 99
Query: 121 FRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKL 162
+R+DGK +P++KGI+LT+EQW AF K++PAI+EA+ KM+S+L
Sbjct: 100 YRKDGKELPSSKGISLTAEQWSAFKKNVPAIEEAIQKMESRL 141
>gi|297813541|ref|XP_002874654.1| hypothetical protein ARALYDRAFT_489930 [Arabidopsis lyrata subsp.
lyrata]
gi|297320491|gb|EFH50913.1| hypothetical protein ARALYDRAFT_489930 [Arabidopsis lyrata subsp.
lyrata]
Length = 165
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 114/165 (69%), Gaps = 3/165 (1%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
ME + +I +TV E+L SDM+EMTEFKVR ASE LGIDLS+ +HK F+R VVE FL
Sbjct: 1 MEKETKEKIERTVREILNESDMKEMTEFKVRQLASEGLGIDLSEKSHKAFVRSVVEKFLH 60
Query: 61 STTESTDNRIEPDLEVEEQRAQIGK---RINDDGDSIICKLSNKRTVAIQEFKGRAFVSI 117
+ + + E E+ GK +DDGD II +LS+KR V IQEFKG+ VSI
Sbjct: 61 EERARDYEKSQVNKEEEDGDKDCGKGNKEFDDDGDLIIWRLSDKRRVTIQEFKGKTLVSI 120
Query: 118 REYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKL 162
REY+++DGK +PT+KGI+LT EQW F K++PAI+ AV KM+S++
Sbjct: 121 REYYKKDGKELPTSKGISLTDEQWSTFKKNIPAIENAVKKMESRV 165
>gi|225426286|ref|XP_002266998.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
[Vitis vinifera]
Length = 187
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 126/186 (67%), Gaps = 24/186 (12%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
ME RI +TV+E+LK++DM+EMTEFKVR AS++LGI+LS ++KRF+R VVE+FL
Sbjct: 1 MEPETRRRIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFLQ 60
Query: 61 STTESTD--------NRIEPDLEV----------------EEQRAQIGKRINDDGDSIIC 96
ST E +R + + E + ++ K +DDGD IIC
Sbjct: 61 STEEPGREPEPEPEPDRKKANTEAAEREPTEEEEEEEVEEDRGKSSGVKEYDDDGDLIIC 120
Query: 97 KLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVV 156
+LS++R V IQ+F+G+ VSIRE++R+DGK +P++KGI+LT+EQW AF K++PAI+EA+
Sbjct: 121 RLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKGISLTAEQWSAFKKNVPAIEEAIQ 180
Query: 157 KMQSKL 162
KM+S+L
Sbjct: 181 KMESRL 186
>gi|15236980|ref|NP_192830.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis
thaliana]
gi|145333013|ref|NP_001078372.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis
thaliana]
gi|37079408|sp|O65155.1|KELP_ARATH RecName: Full=RNA polymerase II transcriptional coactivator KELP
gi|2997686|gb|AAC08575.1| putative transcriptional co-activator [Arabidopsis thaliana]
gi|3513735|gb|AAC33951.1| contains similarity to RNA polymerase II transcription cofactor p15
[Arabidopsis thaliana]
gi|4539366|emb|CAB40060.1| putative protein [Arabidopsis thaliana]
gi|7267790|emb|CAB81193.1| putative protein [Arabidopsis thaliana]
gi|21554027|gb|AAM63108.1| putative transcriptional coactivator [Arabidopsis thaliana]
gi|29028806|gb|AAO64782.1| At4g10920 [Arabidopsis thaliana]
gi|110736559|dbj|BAF00245.1| hypothetical protein [Arabidopsis thaliana]
gi|110738319|dbj|BAF01087.1| hypothetical protein [Arabidopsis thaliana]
gi|332657543|gb|AEE82943.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis
thaliana]
gi|332657544|gb|AEE82944.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis
thaliana]
Length = 165
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
Query: 13 VMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLS--TTESTDNRI 70
V+E+L SDM+E+TEFKVR ASE+L IDLS+ +HK F+R VVE FL E ++++
Sbjct: 13 VIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLDEERAREYENSQV 72
Query: 71 EPDLEVEEQRAQIG-KRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVP 129
+ E ++ G K +DDGD IIC+LS+KR V IQEFKG++ VSIREY+++DGK +P
Sbjct: 73 NKEEEDGDKDCGKGNKEFDDDGDLIICRLSDKRRVTIQEFKGKSLVSIREYYKKDGKELP 132
Query: 130 TAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKL 162
T+KGI+LT EQW F K++PAI+ AV KM+S++
Sbjct: 133 TSKGISLTDEQWSTFKKNMPAIENAVKKMESRV 165
>gi|147820800|emb|CAN65190.1| hypothetical protein VITISV_032101 [Vitis vinifera]
Length = 320
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 126/186 (67%), Gaps = 24/186 (12%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
ME RI +TV+E+LK++DM+EMTEFKVR AS++LGI+LS ++KRF+R VVE+FL
Sbjct: 79 MEPETRRRIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFLQ 138
Query: 61 STTESTD--------NRIEPDLEV----------------EEQRAQIGKRINDDGDSIIC 96
ST E +R + + E + ++ K +DDGD IIC
Sbjct: 139 STEEPGREPEPEPEPDRKKANTEAAEREPTEEEEEEEVEEDRGKSSGVKEYDDDGDLIIC 198
Query: 97 KLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVV 156
+LS++R V IQ+F+G+ VSIRE++R+DGK +P++KGI+LT+EQW AF K++PAI+EA+
Sbjct: 199 RLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKGISLTAEQWSAFKKNVPAIEEAIQ 258
Query: 157 KMQSKL 162
KM+S+L
Sbjct: 259 KMESRL 264
>gi|449462521|ref|XP_004148989.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
[Cucumis sativus]
gi|449506203|ref|XP_004162681.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
[Cucumis sativus]
Length = 158
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 113/162 (69%), Gaps = 5/162 (3%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
M++ + RI + V +L++SDM+EMTE K+R AS+ L +DLS + +K +R VVESFL
Sbjct: 1 MDSQLQRRIEEAVRAILESSDMDEMTESKIRALASKDLHLDLSKSPYKSLVRTVVESFLQ 60
Query: 61 STTESTDNRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREY 120
+E P+ + E+ A K +DDGD I+C LS+KR V IQ+F+G+ VSIRE+
Sbjct: 61 ERSEQ-----HPEDQPEDASAAKEKEYDDDGDLIVCWLSSKRKVTIQDFRGKTLVSIREF 115
Query: 121 FRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKL 162
+R+DGK +PTAKGI+LT EQW F K++PAI++A+ MQS++
Sbjct: 116 YRKDGKDLPTAKGISLTEEQWSVFKKNVPAIEKAIKNMQSQI 157
>gi|351725209|ref|NP_001238108.1| uncharacterized protein LOC100499671 [Glycine max]
gi|255625681|gb|ACU13185.1| unknown [Glycine max]
Length = 163
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 2 ETVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLS 61
+T +GRI +TV +L+ SDM+E+TE K+R +ASE LG+DLS K F++ VV++FL
Sbjct: 3 DTETKGRIEETVRRILQESDMDEVTESKIRKQASEHLGLDLSQPYFKAFVKQVVKAFLQE 62
Query: 62 TTESTDNRIEPDLEVEE-QRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREY 120
+ + + + E EE A GK +D+GD IIC+LS+KR V IQ+F+G+ VSIREY
Sbjct: 63 EEQRQKQQQQDEDEEEELGGASKGKEYDDEGDLIICRLSDKRRVTIQDFRGKTLVSIREY 122
Query: 121 FRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQS 160
+++DGK +PT+KGI+LT EQW AF K++PAI++A+ KM+S
Sbjct: 123 YKKDGKELPTSKGISLTEEQWSAFKKNVPAIEKAIKKMES 162
>gi|351722649|ref|NP_001238275.1| uncharacterized protein LOC100305633 [Glycine max]
gi|255626145|gb|ACU13417.1| unknown [Glycine max]
Length = 166
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 115/160 (71%), Gaps = 4/160 (2%)
Query: 5 NEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLSTTE 64
+GRI +TV VL+ SDM+E+TE K+R +ASE+LG+DLS + K F++ VV++FL +
Sbjct: 6 TKGRIEETVRRVLQESDMDEVTESKIRKQASEQLGLDLSQPHFKAFVKQVVKAFLQEEEQ 65
Query: 65 STDNRIEPDLEVEEQR----AQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREY 120
+ + + + +E+ GK +D+GD IIC+LS+KR V IQ+F+G+ VSIREY
Sbjct: 66 RQQQQQQDEDDDDEEEEQGGVSKGKEYDDEGDLIICRLSDKRRVPIQDFRGKTLVSIREY 125
Query: 121 FRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQS 160
+++DGK +PT+KGI+LT EQW F K++PAI++A+ KM+S
Sbjct: 126 YKKDGKELPTSKGISLTEEQWSTFKKNVPAIEKAIKKMES 165
>gi|147767180|emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]
Length = 1234
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 137/261 (52%), Gaps = 18/261 (6%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
L RF+G N+ W ++ LL LK+ Y+L P + P+ + +V AA +K D
Sbjct: 16 LDRFDGSNFTRWQDKVRFLLTALKIFYILD---PTLAPLPEPKENDTPQVVAARKKREED 72
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
ICR HILN LSD LY Y+ T+SA+E+WE L+ Y EE GTK+ + +YI+F+ FD
Sbjct: 73 ELICRGHILNALSDRLYDLYT-NTNSAREIWEALENKYKAEEEGTKKFLISQYIDFKFFD 131
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLM-RMEYLTFTM 367
EK + Q EL I + + + + E F V I++KLP SWK + +++ + E +
Sbjct: 132 EKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHKSEDYSLEE 191
Query: 368 LMDHIKAEEESRSHNKQ-EEPSKFVELSPAVNFGPRMRE------------MSKKRRESE 414
+ H++ EEESRS +K EE + + A++ R MS K+ + +
Sbjct: 192 IQKHLRIEEESRSRDKMVEESNGGTNKANAISKANHPRGKNNNNKKNSGNYMSPKKNQEQ 251
Query: 415 MDSKTVVCYNCRKKGHVAKHC 435
K C+ C K GH A+ C
Sbjct: 252 FKGKKGXCFVCGKPGHYAREC 272
>gi|147804859|emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
Length = 1473
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 138/261 (52%), Gaps = 18/261 (6%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
L RF+G N+ W ++ LL LK+ Y+L P + P+ + +V AA +K D
Sbjct: 16 LDRFDGSNFXRWQDKVRFLLTALKIFYILD---PTLXPLPEPKENDTPQVVAARKKREED 72
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
ICR HILN LSD LY Y+ T SA+E+WE L+ Y EE GTK+ + +YI+F+ FD
Sbjct: 73 ELICRGHILNALSDRLYDLYT-NTXSAREIWEALENKYKAEEEGTKKFLISQYIDFKFFD 131
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLM-RMEYLTFTM 367
EK + Q EL I + + + + E F V I++KLP SWK + +++ + E +
Sbjct: 132 EKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHKSEDYSLEE 191
Query: 368 LMDHIKAEEESRSHNKQ-EEPSKFVELSPAVNFG--PRMRE----------MSKKRRESE 414
+ H++ EEESRS +K EE + + A++ PR + MS K+ + +
Sbjct: 192 IQKHLRIEEESRSRDKMVEESNGGTNKANAISKANHPRGKNNNNKKNSGNYMSPKKNQEQ 251
Query: 415 MDSKTVVCYNCRKKGHVAKHC 435
K C+ C K GH A+ C
Sbjct: 252 FKGKKGPCFVCGKPGHYAREC 272
>gi|359493505|ref|XP_002263348.2| PREDICTED: wall-associated receptor kinase 2-like [Vitis vinifera]
Length = 1182
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 139/265 (52%), Gaps = 18/265 (6%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
L RF+G N+ W ++ LL LK+ Y+L P + P+ + +V AA +K D
Sbjct: 8 LDRFDGSNFTRWQDKVRFLLTALKIFYILD---PTLAPLPEPKENDTPQVVAARKKREED 64
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
ICR HILN LSD LY Y+ T SA+E+WE L+ Y EE GTK+ + +YI+F+ FD
Sbjct: 65 ELICRGHILNALSDRLYDLYT-NTYSAREIWEALENKYKAEEEGTKKFLISQYIDFKFFD 123
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLM-RMEYLTFTM 367
EK + Q EL I + + + + E F V I++KLP SWK + +++ + E +
Sbjct: 124 EKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHKSEDYSLEE 183
Query: 368 LMDHIKAEEESRSHNKQ-EEPSKFVELSPAVNFG--PRMRE----------MSKKRRESE 414
+ H++ EEE RS +K EE + + AV+ PR + MS K+ + +
Sbjct: 184 IQKHLRIEEELRSRDKMAEESNGGTNKANAVSKANHPRGKNNNDKRNSGNYMSPKKNQEQ 243
Query: 415 MDSKTVVCYNCRKKGHVAKHCHNKR 439
K C+ C K GH A+ C ++
Sbjct: 244 FKGKKGPCFVCGKLGHYARECRYRK 268
>gi|147857754|emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]
Length = 804
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 137/261 (52%), Gaps = 18/261 (6%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
L RF+G N+ W ++ LL LK+ Y+L P + P+ + +V AA +K D
Sbjct: 16 LDRFDGSNFTRWQDKVRFLLTALKIFYILD---PTLAPLPEPKENDTPQVVAARKKREED 72
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
ICR HILN LSD LY Y+ T+SA+E+WE L+ Y EE GTK+ + +YI+F+ FD
Sbjct: 73 ELICRGHILNALSDRLYDLYT-NTNSAREIWEALENKYKAEEEGTKKFLISQYIDFKFFD 131
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLM-RMEYLTFTM 367
EK + Q EL I + + + + E F V I++KLP SWK + +++ + E +
Sbjct: 132 EKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHKSEDYSLEE 191
Query: 368 LMDHIKAEEESRSHNKQ-EEPSKFVELSPAVNFGPRMRE------------MSKKRRESE 414
+ H++ +EESRS +K EE + + A++ R MS K+ + +
Sbjct: 192 IQKHLRIKEESRSRDKMVEESNGGTNKANAISKANHPRGKNNNNKKNSGNYMSPKKNQEQ 251
Query: 415 MDSKTVVCYNCRKKGHVAKHC 435
K C+ C K GH A+ C
Sbjct: 252 FKGKKGPCFVCGKPGHYAREC 272
>gi|147782562|emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]
Length = 791
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 140/265 (52%), Gaps = 18/265 (6%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
L RF+G N+ W ++ LL LK+ Y+L P + P+ + +V AA +K D
Sbjct: 16 LDRFDGSNFTRWQDKVRFLLTALKIFYILD---PTLAPLPEPKENDTPQVVAARKKREKD 72
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
ICR HILN LSD LY Y+ T+SA+E+WE L+ Y EE GTKR + +YI+F+ D
Sbjct: 73 ELICRGHILNALSDRLYDLYT-NTNSAREIWEALENKYKAEEEGTKRFLISQYIDFKFVD 131
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLM-RMEYLTFTM 367
EK + Q +L I + + + + E F V I+ KLP SWK + +++ + E +
Sbjct: 132 EKPLLPQIHKLQVIVNKLKVLKIELPEAFQVGAIVVKLPSSWKGYRKRILHKSEDYSLEE 191
Query: 368 LMDHIKAEEESRSHNKQ-EEPSKFVELSPAVNFG--PRMRE----------MSKKRRESE 414
+ H++ EEESRS +K EE + + AV+ P+ + MS K+ + +
Sbjct: 192 IQKHLRIEEESRSRDKMVEESNGGTNKANAVSKANHPKGKNNNNKKNSGNYMSPKKNQEQ 251
Query: 415 MDSKTVVCYNCRKKGHVAKHCHNKR 439
K +C+ C K GH A+ C ++
Sbjct: 252 FKGKKGLCFVCGKPGHYARECRYRK 276
>gi|293332189|ref|NP_001170611.1| uncharacterized protein LOC100384655 [Zea mays]
gi|238006358|gb|ACR34214.1| unknown [Zea mays]
gi|413951045|gb|AFW83694.1| hypothetical protein ZEAMMB73_831324 [Zea mays]
Length = 183
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 113/180 (62%), Gaps = 21/180 (11%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
M+ + + TV+E+L+ SDME +TE+KVR AS+RLGIDLS + K F+RGVVE +LL
Sbjct: 1 MDEATKKNVEATVLEILRGSDMESVTEYKVRAAASDRLGIDLSIPDRKLFVRGVVEEYLL 60
Query: 61 S---------------------TTESTDNRIEPDLEVEEQRAQIGKRINDDGDSIICKLS 99
S ++ + D E +E + + +D GD I+C+LS
Sbjct: 61 SLSSKEEAKAEEEGVTGRESKGKEHEEEDEEDDDEEEDEGKGGGKREYDDQGDLILCRLS 120
Query: 100 NKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQ 159
+KR V + EFKGR+ VSIRE++ +DGK +P+AKGI++T EQW AF ++PAI++A+ K++
Sbjct: 121 SKRRVTLSEFKGRSLVSIREFYVKDGKEMPSAKGISMTLEQWEAFCNAVPAIEDAIKKLE 180
>gi|294463357|gb|ADE77213.1| unknown [Picea sitchensis]
Length = 197
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 114/190 (60%), Gaps = 38/190 (20%)
Query: 8 RIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFL-------- 59
+I +TV+ +L+ ++M +MTE+KVR EA E+L I+LS+ +K+F+R +VE+FL
Sbjct: 8 KIEKTVVGILETANMVDMTEYKVRKEAGEKLNINLSETQYKKFVRNIVENFLKSRQDEEE 67
Query: 60 --------------------------LSTTESTDNRIEPDLEVEEQRAQIGK----RIND 89
S + + +E ++ +Q G+ I+D
Sbjct: 68 QEQATEEAEQKVEAEVEAETEEEEEEESPVKKQKKNKKMKIEASKKASQAGELQEATIDD 127
Query: 90 DGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLP 149
+GD IICKL+++R V++QEFKG VSIREY+ +DGK +PT+KGI+LT +QW+AF K +P
Sbjct: 128 NGDVIICKLNSRRNVSVQEFKGNKLVSIREYYEKDGKQLPTSKGISLTIDQWKAFKKGVP 187
Query: 150 AIDEAVVKMQ 159
AI EA+ ++Q
Sbjct: 188 AIVEAIQQLQ 197
>gi|388517097|gb|AFK46610.1| unknown [Lotus japonicus]
Length = 160
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 109/158 (68%), Gaps = 4/158 (2%)
Query: 5 NEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLSTTE 64
+ RI + V ++L+ S+M+E+TE K+R +AS LG+DLS K F++ VV++FL +
Sbjct: 7 TKARIEEAVRKILEESNMDEVTESKIRKQASTELGLDLSVPPFKAFVKQVVQAFLEEKQQ 66
Query: 65 STDNRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRD 124
+ + + + Q K +DDGD IICKLS KR V IQ+F+G+ VSIREY+R+D
Sbjct: 67 QLEEQQQEEGGGVTQ----DKEFDDDGDLIICKLSEKRKVTIQDFRGKTLVSIREYYRKD 122
Query: 125 GKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKL 162
GK +PT+KGI+LT EQW F K++PA+++A+ KM+S++
Sbjct: 123 GKDLPTSKGISLTEEQWSTFKKNVPAVEKAIEKMESRI 160
>gi|326526877|dbj|BAK00827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 190
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 107/183 (58%), Gaps = 28/183 (15%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
M+ + ++ V+E+L+ SDME +TE+KVR A++RLGIDL HKRF+R +VE +L
Sbjct: 1 MDEKTQDKVEAAVLEILRGSDMESLTEYKVRTTAADRLGIDLDLPLHKRFVRRLVEDYLK 60
Query: 61 STTESTDNRIEPDLEVE----------------------------EQRAQIGKRINDDGD 92
S E D + + E ++ GK +D+GD
Sbjct: 61 SLAEEEDRKQKGSSRKEAKKKQQRQEEEEEQEDDAEKEGEEEEEEGEKGGEGKEFDDNGD 120
Query: 93 SIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAID 152
IIC+LS R V +QEFKG VSIREY+ +DGK +PT+KGI++T EQW FSKS+PAI+
Sbjct: 121 LIICRLSKSRRVTLQEFKGMTLVSIREYYLKDGKEMPTSKGISMTVEQWETFSKSVPAIE 180
Query: 153 EAV 155
+A+
Sbjct: 181 DAI 183
>gi|115439469|ref|NP_001044014.1| Os01g0706000 [Oryza sativa Japonica Group]
gi|13872930|dbj|BAB44036.1| transcriptional coactivator-like [Oryza sativa Japonica Group]
gi|19571089|dbj|BAB86514.1| transcriptional coactivator-like [Oryza sativa Japonica Group]
gi|113533545|dbj|BAF05928.1| Os01g0706000 [Oryza sativa Japonica Group]
gi|125527421|gb|EAY75535.1| hypothetical protein OsI_03440 [Oryza sativa Indica Group]
gi|215679062|dbj|BAG96492.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697829|dbj|BAG92022.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765526|dbj|BAG87223.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 184
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 114/180 (63%), Gaps = 23/180 (12%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
M+ + ++ TV+E+L+ SDME +TEFKVR A++RLGIDLS + KRF+R VVE +L
Sbjct: 1 MDEETQKKVESTVLEILRGSDMESLTEFKVRTAAADRLGIDLSIPDRKRFVRRVVEGYLE 60
Query: 61 STT---------------------ESTDNRIEPDLEVEEQRAQIGKR-INDDGDSIICKL 98
S + E + E + E EE+R KR +D+GD I+C+L
Sbjct: 61 SLSQEDEQEQQQEQAGGAGEEGKDEQAEEEEEEEEEEEEERGGGTKREYDDEGDLILCRL 120
Query: 99 SNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
S +R V +QEFKG+ +SIREY+ +DGK +P AKGI+LT EQW AF S+PAI++A+ K+
Sbjct: 121 SARRRVTLQEFKGKTLLSIREYYFKDGKELP-AKGISLTVEQWEAFRDSVPAIEDAIKKL 179
>gi|222619134|gb|EEE55266.1| hypothetical protein OsJ_03184 [Oryza sativa Japonica Group]
Length = 315
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 114/180 (63%), Gaps = 23/180 (12%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
M+ + ++ TV+E+L+ SDME +TEFKVR A++RLGIDLS + KRF+R VVE +L
Sbjct: 132 MDEETQKKVESTVLEILRGSDMESLTEFKVRTAAADRLGIDLSIPDRKRFVRRVVEGYLE 191
Query: 61 STT---------------------ESTDNRIEPDLEVEEQRAQIGKR-INDDGDSIICKL 98
S + E + E + E EE+R KR +D+GD I+C+L
Sbjct: 192 SLSQEDEQEQQQEQAGGAGEEGKDEQAEEEEEEEEEEEEERGGGTKREYDDEGDLILCRL 251
Query: 99 SNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
S +R V +QEFKG+ +SIREY+ +DGK +P AKGI+LT EQW AF S+PAI++A+ K+
Sbjct: 252 SARRRVTLQEFKGKTLLSIREYYFKDGKELP-AKGISLTVEQWEAFRDSVPAIEDAIKKL 310
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
M+ + ++ TV+E+L+ SDME +TEFKVR A++RLGIDLS + KRF+R VVE +L
Sbjct: 1 MDEETQKKVESTVLEILRGSDMESLTEFKVRTAAADRLGIDLSIPDRKRFVRRVVEGYLE 60
Query: 61 S 61
S
Sbjct: 61 S 61
>gi|295799979|emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
Length = 1358
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 139/271 (51%), Gaps = 19/271 (7%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+L RF+G+NY WA +++ +L LK+ Y+L P + P + E+ A ++ +
Sbjct: 6 VKLDRFDGQNYTRWADKVKFMLVVLKLYYILDPDLPAIPDDPPGEAGELPNEDLARQRLI 65
Query: 247 NDN--NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEF 304
++C HI N LSD LY Y+ SA+ELW+ L+ Y E GT + + KY++F
Sbjct: 66 RKEAEDLCLGHIKNSLSDRLYDLYAP-IKSARELWKALEDKYKAHEEGTNKYLIAKYLDF 124
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLM-RMEYL 363
QM D+KS+ EQ EL + + + A + + E F V VI++KLP WKDF ++M + E
Sbjct: 125 QMVDDKSILEQVHELQVLVNKLTALSIPLPEIFQVGVIIAKLPPGWKDFSKRMMHKSEDY 184
Query: 364 TFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVN--------------FGPRMREMSKK 409
+ L+ H++ EEE+R+ +K+ + V + P+ +E K
Sbjct: 185 SLDELLKHLRIEEETRNRDKRGKVGSSVNHVAGGSGQKGKGASSRNKKFTAPKKKEFKKS 244
Query: 410 RRESEMDSK-TVVCYNCRKKGHVAKHCHNKR 439
+ + K + C+ C + GH A+ C ++
Sbjct: 245 QHTNNHQPKRSGKCHVCGETGHYARECSQRK 275
>gi|255537849|ref|XP_002509991.1| RNA polymerase II transcriptional coactivator kelp, putative
[Ricinus communis]
gi|223549890|gb|EEF51378.1| RNA polymerase II transcriptional coactivator kelp, putative
[Ricinus communis]
Length = 151
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 100/155 (64%), Gaps = 11/155 (7%)
Query: 8 RIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLSTTESTD 67
+I +TV E+L+ SDME TE ++R AS +L +DL+ + +K F+R VV +FL
Sbjct: 8 KIEETVREILEESDMETTTENQIRKIASRKLELDLNKSEYKAFVRHVVNNFL-------- 59
Query: 68 NRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKL 127
E EEQ +DDGD I+C+LS KR V IQ F+G VSIRE++++DGK
Sbjct: 60 ---EEQNAKEEQGHSKEPEFDDDGDLIVCRLSEKRKVTIQNFRGTTLVSIREFYKKDGKE 116
Query: 128 VPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKL 162
+PT+KGI+L EQW A K++PAI+EA+ +M+ +L
Sbjct: 117 LPTSKGISLKEEQWSALKKNIPAIEEAIREMEDRL 151
>gi|359497847|ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
vinifera]
Length = 478
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 142/273 (52%), Gaps = 29/273 (10%)
Query: 181 PLELFPTE-LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVK 239
P+ + P E +F+G N++ W Q++ L L +A LT+ P + E +V
Sbjct: 32 PISVSPGEKPEKFSGINFKRWQQKMLFYLTTLNLARFLTEDAPKL-----KEDEHDIQVI 86
Query: 240 AAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVK 299
+A W + + +CR++++N L+D LY YS + +AKELWE L Y E+ G K+ V
Sbjct: 87 SAIDAWKHSDFLCRNYVMNGLADSLYNVYSDK-KTAKELWESLDRKYKTEDAGAKKFVVG 145
Query: 300 KYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKL 357
++++++M D K+V Q EL I I A GMM+ E F V+ I+ KLP +WKDF +K
Sbjct: 146 RFLDYKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNYLKH 205
Query: 358 MRMEYLTFTMLMDHIKAEEESR------SHNKQEEPSKFVELSPAVNFGPRMREMSKKRR 411
R E ++ L+ ++ EE++R +H E + FVE + N + + K +
Sbjct: 206 KRKE-MSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSN----AKTNNNKGK 260
Query: 412 ESEMDSKTVV---------CYNCRKKGHVAKHC 435
S++ K + C+NC K+GH + C
Sbjct: 261 GSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDC 293
>gi|359476117|ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
Length = 946
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 141/273 (51%), Gaps = 29/273 (10%)
Query: 181 PLELFPTE-LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVK 239
P+ + P E +F+G N++ W Q++ L L +A LT+ P + E +V
Sbjct: 32 PISVSPGEKPEKFSGLNFKRWQQKMLFYLTTLNLARFLTEDAPKL-----KEDEHDIQVI 86
Query: 240 AAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVK 299
+A W + + +CR++++N L+D LY YS + AKELWE L Y E+ G K+ V
Sbjct: 87 SAIDAWKHSDFLCRNYVMNGLADSLYNVYSDK-KIAKELWESLDRKYKTEDAGAKKFVVG 145
Query: 300 KYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKL 357
++++++M D K+V Q EL I I A GMM+ E F V+ I+ KLP +WKDF C+K
Sbjct: 146 RFLDYKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNCLKH 205
Query: 358 MRMEYLTFTMLMDHIKAEEESRS------HNKQEEPSKFVELSPAVNFGPRMREMSKKRR 411
R E ++ L+ ++ EE++R H E + FVE + + + + K +
Sbjct: 206 KRKE-MSIEDLIIRLRIEEDNRRSEKKGVHTLNEAKANFVEHGQS----SKAKTNNNKGK 260
Query: 412 ESEMDSKTVV---------CYNCRKKGHVAKHC 435
S++ K + C+NC K+GH + C
Sbjct: 261 GSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDC 293
>gi|357136106|ref|XP_003569647.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
[Brachypodium distachyon]
Length = 183
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 103/176 (58%), Gaps = 21/176 (11%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
M+ + ++ TV+E+L+ SD E TE+KVR A++RLGIDLS + K F+R +V+ +L
Sbjct: 1 MDEKTQKKVEATVLEILRGSDRESSTEYKVRSAATDRLGIDLSLPDRKLFVRRIVDGYLR 60
Query: 61 STTESTDNRIEPDLEVEEQR---------------------AQIGKRINDDGDSIICKLS 99
S E + + + + E + K +D+GD I+C+LS
Sbjct: 61 SLVEEDEQKQQAGSDEEGDKKPQEEEKEVVEKEEEEDEKEGGAGNKEFDDNGDLILCRLS 120
Query: 100 NKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
R V +QEF+G VSIREY+ +DGK +PT+KGI++T EQW F S+PAI++A+
Sbjct: 121 THRRVTLQEFRGMTLVSIREYYLKDGKEMPTSKGISMTVEQWETFRNSVPAIEDAI 176
>gi|147818102|emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 144/279 (51%), Gaps = 29/279 (10%)
Query: 175 ANSMTSPLELFPTE-LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSE 233
A S P+ + P E +F+G N++ W Q++ L L +A LT+ P + E
Sbjct: 26 AMSTAVPISVSPGEKPEKFSGLNFKRWQQKMLFYLTTLNLARFLTEDAPKL-----KEDE 80
Query: 234 EVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGT 293
+V +A W + + +CR++++N L+D LY YS + +AKELWE L Y E+ G
Sbjct: 81 HDIQVISAIDAWKHSDFLCRNYVMNGLTDSLYNVYSDK-KTAKELWESLDRKYKTEDAGA 139
Query: 294 KRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
K+ V ++++++M D K+V Q EL I I A GMM+ E F V+ I+ KLP +WKDF
Sbjct: 140 KKFVVGRFLDYKMVDSKTVVSQVQELQVILHEIHADGMMLSETFQVAAIIEKLPPAWKDF 199
Query: 354 --CIKLMRMEYLTFTMLMDHIKAEEESR------SHNKQEEPSKFVELSPAVNFGPRMRE 405
+K R E ++ L+ ++ EE++R +H E + FVE + + +
Sbjct: 200 KNYLKHKRKE-MSIEDLIIRLRIEEDNRRSEKKGAHTLNEAQANFVEHGQS----SKAKT 254
Query: 406 MSKKRRESEMDSKTVV---------CYNCRKKGHVAKHC 435
+ K + S++ K + C+NC K+GH + C
Sbjct: 255 NNNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDC 293
>gi|147804664|emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 142/273 (52%), Gaps = 29/273 (10%)
Query: 181 PLELFPTE-LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVK 239
P+ + P E +F+G N++ W Q++ L L +A LT+ P + E +V
Sbjct: 32 PISVSPGEKPEKFSGLNFKRWQQKMLFYLTTLNLARFLTEDAPKL-----KEDEHDIQVI 86
Query: 240 AAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVK 299
+A W + + +CR++++N L+D LY YS + +AKELWE L Y E+ G K+ V
Sbjct: 87 SAIDAWKHSDFLCRNYVMNGLADSLYNVYSDK-KTAKELWESLDRKYKTEDAGAKKFVVG 145
Query: 300 KYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKL 357
++++++M D K+V Q EL I I A GMM+ E F V+ I+ KLP +WKDF +K
Sbjct: 146 RFLDYKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNYLKH 205
Query: 358 MRMEYLTFTMLMDHIKAEEESR------SHNKQEEPSKFVELSPAVNFGPRMREMSKKRR 411
R E ++ L+ ++ EE++R +H E + FVE + + + + K +
Sbjct: 206 KRKE-MSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQS----SKAKTNNNKGK 260
Query: 412 ESEMDSKTVV---------CYNCRKKGHVAKHC 435
S++ K + C+NC K+GH + C
Sbjct: 261 GSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDC 293
>gi|14586969|gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
Length = 701
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 136/260 (52%), Gaps = 14/260 (5%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
+FNG+N++ W Q++ L L +A LT P P+ ++ +V +A W + +
Sbjct: 44 KFNGQNFKRWQQKMFFYLTTLNLARFLTKDAPK----PKEGETDI-QVASAIDAWHHSDF 98
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
+C+++++N LSD LY Y + +AKELWE L Y E+ GTK+ V ++++F+M D K
Sbjct: 99 LCKNYVMNGLSDSLYNVYIGK-KTAKELWESLDRKYKTEDAGTKKFVVGRFLDFKMVDSK 157
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTMLM 369
+V Q EL I I+A GM + E F V+ I+ KLP +WKDF L + + + L+
Sbjct: 158 TVISQVQELQIILSEILAEGMHLSETFQVAAIIEKLPPAWKDFKSYLKHKQKEMNIEGLV 217
Query: 370 DHIKAEEESRSHNK----QEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNC 425
++ EE++R+ + + FVE P + +++++ K CYNC
Sbjct: 218 VKLRIEEDNRNAERIGAISMAKANFVEHGPKKKKKKLGPKGGISKKQTKFQGK---CYNC 274
Query: 426 RKKGHVAKHCHNKRLHQEIN 445
K GH A C + +E N
Sbjct: 275 DKMGHKASDCRLPKKKREAN 294
>gi|413951046|gb|AFW83695.1| hypothetical protein ZEAMMB73_831324 [Zea mays]
Length = 209
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 113/206 (54%), Gaps = 47/206 (22%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
M+ + + TV+E+L+ SDME +TE+KVR AS+RLGIDLS + K F+RGVVE +LL
Sbjct: 1 MDEATKKNVEATVLEILRGSDMESVTEYKVRAAASDRLGIDLSIPDRKLFVRGVVEEYLL 60
Query: 61 S---------------------TTESTDNRIEPDLEVEEQRAQIGKRINDDGDSIICKLS 99
S ++ + D E +E + + +D GD I+C+LS
Sbjct: 61 SLSSKEEAKAEEEGVTGRESKGKEHEEEDEEDDDEEEDEGKGGGKREYDDQGDLILCRLS 120
Query: 100 NKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKG-------------------------- 133
+KR V + EFKGR+ VSIRE++ +DGK +P+AKG
Sbjct: 121 SKRRVTLSEFKGRSLVSIREFYVKDGKEMPSAKGYASPVFSCIFRSLFSAVIVLPLVSSC 180
Query: 134 IALTSEQWRAFSKSLPAIDEAVVKMQ 159
I++T EQW AF ++PAI++A+ K++
Sbjct: 181 ISMTLEQWEAFCNAVPAIEDAIKKLE 206
>gi|224058170|ref|XP_002299459.1| predicted protein [Populus trichocarpa]
gi|222846717|gb|EEE84264.1| predicted protein [Populus trichocarpa]
Length = 156
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 96/154 (62%), Gaps = 7/154 (4%)
Query: 8 RIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLSTTESTD 67
+I++TV E+L+ SDME TE ++R AS +L +DL + +K ++R VV SFL E
Sbjct: 8 QIKETVREILEESDMETTTEHQIRRLASNKLDLDLDKSEYKTYVRHVVNSFL----EEQK 63
Query: 68 NRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKL 127
+ E D EE+ + + +D+G+ +IC+LS KR V IQ F+G VSIREY+ G
Sbjct: 64 AKQEDD---EEETGKQEQEYDDEGNLVICRLSAKRKVTIQNFRGANLVSIREYYYDGGAE 120
Query: 128 VPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSK 161
PT KGI+L EQW K++PAI++AV MQ +
Sbjct: 121 RPTTKGISLNEEQWSTLRKNIPAIEKAVKDMQDR 154
>gi|346472431|gb|AEO36060.1| hypothetical protein [Amblyomma maculatum]
Length = 154
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 103/154 (66%), Gaps = 15/154 (9%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
M+ + RI+ V+ +L+ ++MEE TE+KVR A+E+LG+DLS + K F+R VVE FL+
Sbjct: 1 MDLETQQRIKDVVLGILREANMEETTEYKVRTAAAEKLGLDLSLPDRKLFVRQVVEDFLV 60
Query: 61 S-----TTESTDNR------IEPDLEVEEQRAQIGKR----INDDGDSIICKLSNKRTVA 105
S E +NR E +E EE+ + GK+ +D+GD IIC+LSNKR V
Sbjct: 61 SKKEEGEEEEQNNRHQQQQEDEEQVEEEEEEEEEGKKQKREYDDEGDLIICRLSNKRRVT 120
Query: 106 IQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSE 139
IQ+FKGR VSIREY+ +DGK +P++KGI+LT+E
Sbjct: 121 IQDFKGRTLVSIREYYDKDGKQMPSSKGISLTAE 154
>gi|147828230|emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
Length = 1316
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 12/255 (4%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
+FNG ++ W Q++ L L +A L + CPI+ + + E+V V A W + +
Sbjct: 213 KFNGNEFKRWQQKMLFYLTTLNLARFLHEECPILEE-GETNKEKVAVVDA----WKHSDF 267
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
+CR+++LN L + LY Y +AKELW+ L Y E+ G K+ V K+++F+M D K
Sbjct: 268 LCRNYMLNGLDNTLYNVYCS-LKTAKELWDSLDKKYKTEDAGIKKFIVGKFLDFKMIDSK 326
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL------MRMEYLT 364
+V Q EL I I + GM ++F V+ ++ KLP WKDF L M +E L
Sbjct: 327 TVISQVQELQVILHEIHSEGMSFSDSFQVAAVIEKLPPLWKDFKNYLKHKRKEMNLEELI 386
Query: 365 FTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYN 424
+ ++ + E + +N E + +E P N + + ++ + + CYN
Sbjct: 387 VRLRIEEDNRKSEKKGNNSMEAKANVIEQGPKTNKKRKHGDQNQNQESNVAKKFKGKCYN 446
Query: 425 CRKKGHVAKHCHNKR 439
C K GH + N +
Sbjct: 447 CGKTGHKSNDYRNTK 461
>gi|168056620|ref|XP_001780317.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668265|gb|EDQ54876.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 104/165 (63%), Gaps = 6/165 (3%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
ME + R+R TV E+L ++EE++ +VR A++R G+DLS K+F+ V++ L
Sbjct: 1 MEKEEQARVRATVEEILAEVNIEEVSAKQVRDMAAQRTGLDLSSREGKKFVSSVIKKALD 60
Query: 61 STTEST---DNRIEPDLEVEEQRAQIGKRI---NDDGDSIICKLSNKRTVAIQEFKGRAF 114
S +++ P + EE + K I +++G+ IIC+LS KR V + +F+G+
Sbjct: 61 SAADASYAEAGAPNPKEDAEEASREGDKPIYEKDEEGNIIICELSAKRKVVVSQFRGKTL 120
Query: 115 VSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQ 159
+S+REY+ RDGK++P+AKGI+LT+EQ++ +KS ++ A+ +Q
Sbjct: 121 ISVREYYERDGKVLPSAKGISLTAEQFQVLAKSAKDVEAAISSLQ 165
>gi|307135946|gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
Length = 1038
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 137/292 (46%), Gaps = 45/292 (15%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLT----------------------DPCPIV 224
++L +G NYR W+Q++ + KQL+V YVLT P V
Sbjct: 14 SKLEPLDGTNYRRWSQKLLIFFKQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTAV 73
Query: 225 TLCPQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKL 284
+ Q ++V K+ DN R H+LN +SD ++ + + SAK++W L+
Sbjct: 74 AVTDQVKKDQVID----PEKYAKDNKTVRGHLLNHMSDPMFDLFVVQ-KSAKDIWSTLES 128
Query: 285 VYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILS 344
Y ++ G K+ V K+++FQM D+K V EQ E + ++++ GM + E +V+L
Sbjct: 129 RYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVTNVLSEGMKMCEILQANVLLE 188
Query: 345 KLPLSWKDF-CIKLMRMEYLTFTMLMDHIKAEEESR------SHNKQEEPSKFVELSPAV 397
K P SW D+ + + L L+ H++ EE +R S N + VE S V
Sbjct: 189 KFPPSWNDYRNHLKHKKKDLKLHELISHMRTEEANRLKDKLASQNLNSVNANLVE-SSFV 247
Query: 398 NFGPRMREMSKKRRESE----------MDSKTVVCYNCRKKGHVAKHCHNKR 439
N +E K + SE + K +VCY CRK+GH + C+ ++
Sbjct: 248 NRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCRKEGHKSYQCNQRK 299
>gi|302762971|ref|XP_002964907.1| hypothetical protein SELMODRAFT_83446 [Selaginella moellendorffii]
gi|300167140|gb|EFJ33745.1| hypothetical protein SELMODRAFT_83446 [Selaginella moellendorffii]
Length = 167
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 98/158 (62%), Gaps = 8/158 (5%)
Query: 9 IRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLSTTESTDN 68
+R V E+L DM+ +TE VR +A+ER G+++S K F++ +++ F+ S +
Sbjct: 11 VRVAVKEILSEEDMDVVTEGMVRKKAAERAGVEVSAPWFKGFVKQLIQEFV-SARQDKSK 69
Query: 69 RIEPDLEVEEQRAQIGKR------INDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFR 122
R E + E E+ G + + + D IIC+LS KR V++Q F+G+A VSIREY+
Sbjct: 70 RGEEEEEEEKGDENAGSQESSKAMLAEGEDEIICQLSGKRNVSVQNFRGKALVSIREYYE 129
Query: 123 RDGKLVPTAK-GIALTSEQWRAFSKSLPAIDEAVVKMQ 159
+DGK +P++K GI+LT +QW A K LPAI +A+ +Q
Sbjct: 130 KDGKTLPSSKAGISLTIDQWEALKKELPAIRQAIESLQ 167
>gi|147802407|emb|CAN63713.1| hypothetical protein VITISV_008235 [Vitis vinifera]
Length = 387
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 119/260 (45%), Gaps = 22/260 (8%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
L RFNG N+ W ++ LL LK+ Y+L P + P+ + +V A +K D
Sbjct: 16 LDRFNGSNFTRWQDKVRFLLTTLKIFYILD---PTLAPLPEPKENDTPQVVATRKKMEED 72
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
ICR HILN LSD LY Y+ T SA+E+WE L+ Y EE GTK+ + +YI+F+ F
Sbjct: 73 ELICRGHILNALSDRLYDLYT-NTYSAREIWEALENKYKAEEEGTKKFLISQYIDFKFFY 131
Query: 309 EKSVFEQALELNKIADSIV------AAGMMIYENFHVSVILSKLPLSWKDF-CIKLMRME 361
EK + Q EL + + ++ G + F V ++ WK F I +R
Sbjct: 132 EKPLLPQIHELQRPSKLVLLWLNYHQVGKVTGRGFSTRVKIT----PWKRFKNIFALRKN 187
Query: 362 YLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPR--MREMSKKRRESEMDSKT 419
T ++ EE + NK SK N R MS K+ + + K
Sbjct: 188 RDQETKMV-----EESNGGTNKANAVSKANHPKGKNNNDKRNSGNYMSPKKNQEQFKGKK 242
Query: 420 VVCYNCRKKGHVAKHCHNKR 439
C+ C K H A+ C ++
Sbjct: 243 GPCFVCGKPEHYARECRYRK 262
>gi|147773790|emb|CAN69713.1| hypothetical protein VITISV_011261 [Vitis vinifera]
Length = 382
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 130/256 (50%), Gaps = 23/256 (8%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
+F G +++ W Q++ L L +A VL + P TL +++++ V A W + +
Sbjct: 24 KFTGLDFKRWQQKMLFYLTTLNLAKVLHEDAP--TLKEGETNKKIVAVVEA---WKHSDF 78
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
+C+++ILN L +Y YS + ++KE WE L+ Y E+ G K+S V ++++++M D K
Sbjct: 79 LCKNYILNGLDKTMYNVYS-QVKTSKEXWESLEKKYKTEDVGMKKSIVGRFLDYKMVDSK 137
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTML 368
+V Q EL I + A M + E+F V+ I+ KL SWKDF +K R E + L
Sbjct: 138 TVTSQVQELQIILHELHAEKMELSESFQVAAIVEKLLPSWKDFKNYLKHKRKE-MGLEDL 196
Query: 369 MDHIKAEEES----RSHNKQEEPSKFVELSPAVN-----FGPRMREMSKKRRESEMDSKT 419
+ +K EE++ + K SK + P N FG + + K ++
Sbjct: 197 IXXLKXEEDNCVSEKKVGKHPMESKANLVEPKANKKRKHFGESLSQGKNKYKKFLGK--- 253
Query: 420 VVCYNCRKKGHVAKHC 435
CY C K+GH AK C
Sbjct: 254 --CYICNKQGHRAKXC 267
>gi|147863092|emb|CAN82978.1| hypothetical protein VITISV_023328 [Vitis vinifera]
Length = 474
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 109/200 (54%), Gaps = 9/200 (4%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
+FNG ++ W Q++ + L +A L + CPI+ + + E+V V A W + +
Sbjct: 20 KFNGNEFKRWQQKMLFYVTTLNLARFLHEECPILEE-GETNKEKVAAVDA----WKHSDF 74
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
+CR+++LN L + LY Y +A+ELW+ L Y E+ G K+ V K+++F+M D K
Sbjct: 75 LCRNYVLNGLDNTLYNVYCS-LKTAEELWDSLDKKYKTEDAGMKKFIVGKFLDFKMIDSK 133
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTML 368
+V Q EL I I + GM + ++F V+ ++ KLP WKDF +K R E + L
Sbjct: 134 TVRSQVQELQVILHEIHSEGMSLNDSFQVAAVIEKLPPLWKDFKNYLKHKRKE-MNLEEL 192
Query: 369 MDHIKAEEESRSHNKQEEPS 388
+ ++ EE++R K+ S
Sbjct: 193 IVRLRIEEDNRKFEKKGNNS 212
>gi|33113964|gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
Length = 1309
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 123/257 (47%), Gaps = 20/257 (7%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
F+G +++ W + + L LK+ +V+T P + A + KW N
Sbjct: 30 FDGASFKRWQIKTRMWLTDLKLFWVVTSAVPQAASD-DSDDAAKAAALAEKAKWDEANEA 88
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKS 311
C +LN LS+ L+ YS TS AK LW +L+ + + + G + + Y+ ++M + +S
Sbjct: 89 CLSRLLNVLSNRLFDVYSAFTS-AKGLWTDLENEFSEVDNGNESFTTENYLNYKMVEGRS 147
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM-EYLTFTMLMD 370
V EQ E+ + +V G ++ ++F V+ IL+KLP SW+DF M + +T T L
Sbjct: 148 VMEQLQEIQLLVRDLVQYGCVLPDSFQVNAILAKLPPSWRDFVTSRRHMKKQMTLTELSA 207
Query: 371 HIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDS------------K 418
I EE +RS NK PS+ ++ G R+ KK++ S + +
Sbjct: 208 AINVEERARSSNK---PSQQLQAHVVEKGGD--RKFQKKKKNSPQKNLNQPKSKKMKKKE 262
Query: 419 TVVCYNCRKKGHVAKHC 435
+CY C GH A+ C
Sbjct: 263 DFICYVCGVSGHTARRC 279
>gi|147827069|emb|CAN77568.1| hypothetical protein VITISV_010611 [Vitis vinifera]
Length = 1067
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 126/287 (43%), Gaps = 63/287 (21%)
Query: 185 FPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPC------------------PIVTL 226
+ L RF+G N+ W ++ LL LK+ Y+L DP P +
Sbjct: 12 YLVRLDRFDGSNFTRWQDKVRFLLTALKIFYIL-DPTLDKVRFLLTALKIFYILDPTLAP 70
Query: 227 CPQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVY 286
P+ + +V AA +K D ICR HILN LSD LY Y+ T SA+E+WE L+ Y
Sbjct: 71 LPEPKENDTPQVVAARKKREEDELICRGHILNALSDRLYDLYTN-TYSAREIWEALENKY 129
Query: 287 LDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKL 346
EE V L++ KI + + F V I++KL
Sbjct: 130 KAEE--------------------EVIVNKLKVLKIE---------LPKAFQVGAIVAKL 160
Query: 347 PLSWKDFCIKLM-RMEYLTFTMLMDHIKAEEESRSHNKQ-EEPSKFVELSPAVNFG--PR 402
P SWK + +++ + E + + H++ EEESRS +K EE + + AV+ PR
Sbjct: 161 PSSWKGYRKRILHKSEDYSLEEIQKHLRIEEESRSRDKMVEESNGGTNKANAVSKANHPR 220
Query: 403 MRE----------MSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKR 439
+ MS K+ + + K C+ C K GH A+ C ++
Sbjct: 221 GKNNXDKRNSGNYMSPKKXQEQFKGKKXPCFVCGKXGHYARECRYRK 267
>gi|195646934|gb|ACG42935.1| RNA polymerase II transcriptional coactivator KELP [Zea mays]
gi|414880807|tpg|DAA57938.1| TPA: RNA polymerase II transcriptional coactivator KELP [Zea mays]
Length = 140
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 89/152 (58%), Gaps = 21/152 (13%)
Query: 8 RIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLSTTESTD 67
++ TV+E+ + SDME +TE K +A+E DA ES D
Sbjct: 7 KVEATVLEIPRGSDMESVTENKEEAKAAEE-----GDAGR----------------ESKD 45
Query: 68 NRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKL 127
+ D E +E + + D GD I+C+LS+KR V + EFKGR+ VSIRE++ +DGK
Sbjct: 46 KERKEDEEEDEGKGGGKREYGDQGDLILCRLSSKRRVTLSEFKGRSLVSIREFYVKDGKE 105
Query: 128 VPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQ 159
+P+AKGI++T EQW AF + PAI++A+ K++
Sbjct: 106 MPSAKGISMTMEQWEAFCNAAPAIEDAIKKLE 137
>gi|38194910|gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 140/301 (46%), Gaps = 33/301 (10%)
Query: 166 SSGEQNKDVANSMTSPLELFP--TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPI 223
++ E + V+ + T +LFP +++ F G+N+R W +++ LL VA+ LT P
Sbjct: 11 TAPETSNVVSATQTIFAKLFPDVSKIEVFTGQNFRRWQERVSTLLDMYGVAHALTTAKP- 69
Query: 224 VTLCPQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELK 283
+ T K + W++ N +CRH +L+ LS+ L+ Y+ +AK++W+ L
Sbjct: 70 ---------DSTTAAKQVD-DWIHANKVCRHTLLSVLSNDLFDVYASY-KNAKDIWDSLI 118
Query: 284 LVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVIL 343
L Y E+ +R + KY ++M K + Q E +K+ + I + + + F +++
Sbjct: 119 LKYTAEDIVRQRFVIAKYYRWEMIKGKDIKIQINEYHKLIEDIKTESIKLPDEFVSELLI 178
Query: 344 SKLPLSWKDFCIKL-MRMEYLTFTMLMDHIKAEEESRSH------NKQEEPSKFVELSPA 396
KLP SW D+ +L R + ++ + L+ HI E+ +R + +E PA
Sbjct: 179 EKLPQSWTDYKQQLKHRQKQMSLSDLITHIIIEDTNRKECAAAKAKALSAKANVIEDKPA 238
Query: 397 V-----NFGPRMREMSKKRRESEMDS---KTVVCYNCRKKGHVAKHCHNKRLHQEINDNC 448
F + + +K R S + K C+ C K GH A C H+ ND
Sbjct: 239 PKRYEKKFDHKKKPNNKFSRPSGTNPTFKKKGNCFVCGKPGHHAPQCR----HRAKNDYP 294
Query: 449 P 449
P
Sbjct: 295 P 295
>gi|147777359|emb|CAN62884.1| hypothetical protein VITISV_039744 [Vitis vinifera]
Length = 1136
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 98/201 (48%), Gaps = 34/201 (16%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
L RF+G N+ W ++ LL LK+ Y+L P + P+ + +V AA +K D
Sbjct: 149 LDRFDGSNFTRWQDKVRFLLTALKIFYILD---PTLAPLPEPKENDTPQVVAARKKREED 205
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
ICR HILN LSD LY Y+ T+SA+E+WE L+ Y EE
Sbjct: 206 ELICRGHILNALSDRLYDLYTN-TNSAREIWEALENKYKAEE------------------ 246
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLM-RMEYLTFTM 367
V L++ KI + E F V I++KLP SWK + +++ + E +
Sbjct: 247 --EVIVNKLKVLKIE---------LPEAFQVGAIVAKLPSSWKGYRKRILHKSEDYSLEE 295
Query: 368 LMDHIKAEEESRSHNKQEEPS 388
+ H++ EEESRS +K E S
Sbjct: 296 IQKHLRIEEESRSRDKMVEES 316
>gi|147800584|emb|CAN72993.1| hypothetical protein VITISV_002698 [Vitis vinifera]
Length = 1209
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 92/203 (45%), Gaps = 31/203 (15%)
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRS 296
+V AA +K D ICR HILN LSD LY Y+ T S +E+WE L+ Y EE GTK+
Sbjct: 5 QVVAARKKREXDELICRGHILNALSDRLYDLYTN-TYSXREIWEALENKYKXEEEGTKKF 63
Query: 297 QVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIK 356
+ +YI+F+ F EK Q EL I + + + E F V I++KLP SWK +
Sbjct: 64 LISQYIDFKFFXEKPXLPQIHELQVIVNKLKVLKIEXXEAFQVGAIVAKLPSSWKANAVS 123
Query: 357 LMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMD 416
KA +N + S N+ MS K+ +
Sbjct: 124 ----------------KANHPRGKNNNBKRNSG--------NY------MSPKKNXEQFK 153
Query: 417 SKTVVCYNCRKKGHVAKHCHNKR 439
K C+ C K GH A+ C ++
Sbjct: 154 GKKGXCFVCGKPGHYARECRYRK 176
>gi|147815925|emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
Length = 1544
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 208 LKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQ 267
L L +A VL + P + E ++ AA W + + +C+++ILN L + +Y
Sbjct: 5 LTTLNLAKVLHEDAPTL-----KEGETDKQIVAAVEAWKHSDFLCKNYILNGLDNTMYNV 59
Query: 268 YSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIV 327
YS + + K+LWE L+ Y E+ G K+ V K+++++M D K+V Q EL I +
Sbjct: 60 YS-QVKTTKKLWESLEKKYKAEDVGMKKFIVGKFLDYKMVDSKTVTSQVQELQIILHELH 118
Query: 328 AAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEE 386
A M + E+F V+ I+ KLP SWKDF L + + + L+ +K EE+ +H +++
Sbjct: 119 AEKMELSESFQVAAIVEKLPPSWKDFKNYLKHKHKEMGLEDLIVRLKIEED--NHVFEKK 176
Query: 387 PSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------CYNCRK--KGHVAKHCHNK 438
K S A P+ + K E K CY C K +GH AK CH K
Sbjct: 177 VGKHPMESKANLVEPKANKKRKHFGEGPSQGKNKYKKFARKCYICNKQVQGHSAKDCHLK 236
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKA-AERKWLNDN 249
+ G NY W + +++LL + +VL++ +C + E T+ + A +KW+ +
Sbjct: 336 KLEGPNYVDWKRNLDILLTAEEYKFVLSE------VCLEKPGEGATQDQIKAHQKWVKAD 389
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +IL +S+ L +Q+ K +A ++ E LK ++ D+ +++ +++ + +M +
Sbjct: 390 EMARCYILASMSNVLQHQHQK-MDTAYDILENLKEMFGDQTSAARQNTLREILTSKMEEG 448
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTM 367
V L++ + + + G + + + ++L+ LP S++ F + M + FT+
Sbjct: 449 TQVRTHVLKMMSLLNDMEVLGAEVDKATQIEMVLNTLPPSFQQFRLN-YNMNKMDFTL 505
>gi|108708056|gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1075
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 23/269 (8%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
+FNG ++ W +I L L + V+TD P E R + N
Sbjct: 42 KFNGNHFERWQTRIMYWLTALDLFSVITDQEP-------QPGEFFPRAVPYADFYQTRNF 94
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
C IL+ LSD Y Y TS A+ L E L+ Y + G V+KY +F+M + K
Sbjct: 95 NCVGRILSMLSDKFYDIYMHHTS-ARVLRETLEKKYSVPDAGKDLYLVEKYHDFKMTNGK 153
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTMLM 369
SV EQ EL + + + + + + F V ++++KLP SW+DF L RME +T L+
Sbjct: 154 SVVEQTQELQLLVGELNHSKIALPDKFQVGMVIAKLPPSWRDFATALKHRMEEMTMDDLV 213
Query: 370 DHIKAEEESRSHNK---QEEPSKFVELSPA-----------VNFGPRMREMSKKRRESEM 415
+ EE++R+ + E+ + V L+ N G + R K +
Sbjct: 214 ASLDVEEKARAKDAPLVNEDDNSRVNLTDTHQRRNKKNPKENNSGMKPRGKIDKGNGKKN 273
Query: 416 DSKTVVCYNCRKKGHVAKHCHNKRLHQEI 444
+ C+ C K GH A++C K+ ++++
Sbjct: 274 GKGPMSCFECGKPGHFARNCRYKKRNEKV 302
>gi|226499846|ref|NP_001151972.1| RNA polymerase II transcriptional coactivator KELP [Zea mays]
gi|195651445|gb|ACG45190.1| RNA polymerase II transcriptional coactivator KELP [Zea mays]
Length = 128
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 21/138 (15%)
Query: 8 RIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLSTTESTD 67
++ TV+E+ + SDME +TE K +A+E DA ES D
Sbjct: 7 KVEATVLEIPRGSDMESVTENKEEAKAAEE-----GDAGR----------------ESKD 45
Query: 68 NRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKL 127
+ D E +E + + D GD I+C+LS+KR V + EFKGR+ VSIRE++ +DGK
Sbjct: 46 KERKEDEEEDEGKGGGKREYGDQGDLILCRLSSKRRVTLSEFKGRSLVSIREFYVKDGKE 105
Query: 128 VPTAKGIALTSEQWRAFS 145
+P+AKGI++T EQW AFS
Sbjct: 106 MPSAKGISMTMEQWEAFS 123
>gi|147779979|emb|CAN77804.1| hypothetical protein VITISV_003036 [Vitis vinifera]
Length = 220
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Query: 208 LKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQ 267
L L +A VL P + E ++ AA W + + +C+++ILN L + +Y
Sbjct: 5 LTTLNLAKVLHKDAPTL-----KEGETDKQIVAAIEAWKHSDFLCKNYILNGLDNMMYNV 59
Query: 268 YSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIV 327
YS + + KELWE L+ Y E+ G K+ V ++++++M D K+V Q EL I +
Sbjct: 60 YS-QVKTTKELWESLEKKYKTEDVGMKKFIVGRFLDYKMVDSKTVTSQVQELQIILHELH 118
Query: 328 AAGMMIYENFHVSVILSKLPLSWKDF 353
A M + E+F V+ I+ KLPLSWKDF
Sbjct: 119 AEKMELSESFQVAAIVEKLPLSWKDF 144
>gi|147778047|emb|CAN69731.1| hypothetical protein VITISV_005499 [Vitis vinifera]
Length = 189
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 7/161 (4%)
Query: 181 PLELFPTE-LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVK 239
P+ P E +F+G N++ W Q++ L L +A LT+ P + E +V
Sbjct: 32 PISXSPGEKPEKFSGLNFKRWQQKMLFYLTTLNLARFLTEDAPKL-----KEDEHDIQVI 86
Query: 240 AAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVK 299
+A W + + +CR++++N L+D Y YS + ++ KELWE L Y E+ G K+ V
Sbjct: 87 SAIDAWKHXDFLCRNYVMNGLADSXYNVYSDKKTT-KELWESLDRKYKTEDVGAKKFVVG 145
Query: 300 KYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVS 340
++++++M D K+V Q EL I I A GMM+ E F S
Sbjct: 146 RFLDYKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFPSS 186
>gi|113205226|gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
Length = 1691
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 115/275 (41%), Gaps = 48/275 (17%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
RFNG +++ W ++ L L V+YVLT+ P +E+ K+ D+
Sbjct: 20 RFNGNHFKRWKGKVLFYLSLLNVSYVLTEKNPNKVDDSSMEDDELISHHENVEKYNGDSY 79
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
CR + SSAK++W+ L+ Y EE G K+ ++ FQM D K
Sbjct: 80 KCRTY-----------------SSAKKIWKALQSKYDTEEAGAKKYAASRFFRFQMVDNK 122
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMR--MEYLTFTML 368
SV +QA + I + + + I +N V I+ KLP SWK+F K MR + + L
Sbjct: 123 SVVDQAQDFIMIVGELRSEEVKIGDNLIVCGIVDKLPPSWKEF-QKTMRHKQKETSLETL 181
Query: 369 MDHIKAEEESR---------------------SHNKQEEPSKFVEL-----SPAVNFG-- 400
+ I+ EEE+R S+N E K L N G
Sbjct: 182 IMKIRMEEEARGQDALLQTEENNITTKVNLITSNNATPESHKNTSLKPKKKKFKKNNGRP 241
Query: 401 PRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
P+ + +++ C+ C K GH+A+ C
Sbjct: 242 PKKNNGENIQAQNQQVQDKGPCFVCGKSGHIARFC 276
>gi|3047066|gb|AAC13580.1| contains similarity to retrovirus-related POL polyproteins
[Arabidopsis thaliana]
gi|8843879|dbj|BAA97405.1| unnamed protein product [Arabidopsis thaliana]
Length = 579
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 104/249 (41%), Gaps = 42/249 (16%)
Query: 215 YVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSS 274
Y+ DP PIV PQ ++ T W + C+ ILN L + L+ Y+K SS
Sbjct: 76 YLTEDP-PIV---PQGTTYVYTV--GGMDTWAQGDYCCKGLILNRLVNDLFDLYNKAKSS 129
Query: 275 AKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIY 334
K LW L+ Y +E G +R K++ F+M D K + EQ L +I+ I GM I
Sbjct: 130 -KTLWLTLENKYKTDESGMQRFSTAKFLNFKMVDSKPIMEQVEALQRISQEIELEGMSIC 188
Query: 335 ENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTMLM-----------DHIKAEEESRSHN 382
F + ++ KLP W DF L + + +TF L+ H A+ + N
Sbjct: 189 NVFKTNCLIEKLPPGWLDFKNYLNFKRKAMTFDDLVRRLMIEGNNYGAHAGAQNQGHDVN 248
Query: 383 KQEE-------------PSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKG 429
E P K +++S NF K E + K C++C K G
Sbjct: 249 VAEHKAKLKGKGKGFSIPQKNLKVSSTTNF-------KKSNPERKFKGK---CHHCGKIG 298
Query: 430 HVAKHCHNK 438
H C +K
Sbjct: 299 HKGDVCKSK 307
>gi|359491797|ref|XP_003634327.1| PREDICTED: uncharacterized protein LOC100258195 [Vitis vinifera]
Length = 1274
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 75/133 (56%), Gaps = 7/133 (5%)
Query: 181 PLELFPTE-LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVK 239
P+ + P E +F+G N++ W Q++ L L +A LT+ P + E +V
Sbjct: 32 PISVSPGEKPEKFSGLNFKRWQQKMLFYLTTLNLARFLTEDAPKLK-----EDEHNIQVI 86
Query: 240 AAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVK 299
+A W + + +CR++++N L+D LY YS + +AKELWE L Y E+ G K+ V
Sbjct: 87 SAIDAWKHSDFLCRNYVMNGLADSLYNVYSDK-KTAKELWESLDRKYKTEDVGAKKFVVG 145
Query: 300 KYIEFQMFDEKSV 312
++++++M D K+V
Sbjct: 146 RFLDYKMVDSKTV 158
>gi|356495087|ref|XP_003516412.1| PREDICTED: solute carrier family 40 member 1-like [Glycine max]
Length = 641
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Query: 245 WLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEF 304
W ++ +C++ ILN L+D LY YS SAK +W L+ Y E+ GTK+ V +Y+++
Sbjct: 538 WNENDYLCKNFILNGLADDLYDYYSPY-KSAKLVWLILEKKYDTEKAGTKKYAVSRYLKY 596
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
QM D+KSV Q+ E+ KIA I++ M + E F V++I+ KLP
Sbjct: 597 QMIDDKSVQSQSHEIQKIAHDIISEDMALDEQFRVAIIIDKLP 639
>gi|50838985|gb|AAT81746.1| integrase core domain containing protein [Oryza sativa Japonica
Group]
gi|108708962|gb|ABF96757.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1232
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 34/279 (12%)
Query: 185 FPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERK 244
F + H F+G NY+ W + L L ++ YV L P+ EEV K
Sbjct: 91 FALKPHAFDGSNYKRWKARALLWLTAMQCFYVSRGKRSEPPLSPE---EEV--------K 139
Query: 245 WLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEF 304
+ + + R +++ L+D++ Y S K++W+ L+ + + G++ ++++ ++
Sbjct: 140 FEASDCLFRGALISILADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDY 198
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEY 362
+M D++SV EQA E+ +A + + + F I++KLP SW DF L R E+
Sbjct: 199 KMVDDRSVVEQAHEIQMLAKELENNNCELSDKFVAGGIIAKLPPSWSDFATSLKHKRQEF 258
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPRMREMSKKRRESEMDSK 418
+ + L+ + EE++R+ + + K VE + N P +KK +
Sbjct: 259 -SVSDLIGSLGVEEKARAKDNRH---KKVEGGSSANMVQKKNPHASHNNKKVKPDGKPKA 314
Query: 419 TVV------------CYNCRKKGHVAKHCHNKRLHQEIN 445
T C+ C K GH AK C ++ + N
Sbjct: 315 TTNFKKKGKGKANGDCFVCGKSGHWAKDCPKRKDRKSAN 353
>gi|147809962|emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
Length = 1096
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 82/273 (30%)
Query: 181 PLELFPTE-LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVK 239
P+ + P E +F+G N++ W Q K+ + LT T +
Sbjct: 6 PISVSPGEKPEKFSGLNFKRWQQ---------KMLFYLT-----------------TAID 39
Query: 240 AAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVK 299
A W + + +CR++++N L+D LY YS + +AKELWE L Y E+ G K+ V
Sbjct: 40 A----WKHSDFLCRNYVMNGLADSLYNVYSDK-KTAKELWESLDRKYKTEDAGAKKFVVG 94
Query: 300 KYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKL 357
++++++M D K+V ++L PL WKDF +K
Sbjct: 95 RFLDYKMVDSKTV----------------------------LLLRNYPLPWKDFKNYLKH 126
Query: 358 MRMEYLTFTMLMDHIKAEEESR------SHNKQEEPSKFVELSPAVNFGPRMREMSKKRR 411
R E ++ L+ ++ EE++R +H E + FVE + + + + K +
Sbjct: 127 KRKE-MSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQS----SKAKTNNNKGK 181
Query: 412 ESEMDSKTVV---------CYNCRKKGHVAKHC 435
S++ K + C+NC K+GH + C
Sbjct: 182 GSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDC 214
>gi|147864469|emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]
Length = 1114
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
L RF+G N+ W ++ LL LK+ Y+L P + P+ + +V AA +K D
Sbjct: 16 LDRFDGSNFTRWQDKVRFLLTALKIFYILD---PTLAPLPEPKENDAPQVVAARKKREED 72
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEE 290
ICR HILN LSD LY Y+ T+SA+E+WE L+ Y EE
Sbjct: 73 ELICRGHILNALSDRLYDLYTN-TNSAREIWEALENKYKAEE 113
>gi|113205447|gb|ABI34399.1| Polyprotein, putative [Solanum demissum]
Length = 564
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 20/152 (13%)
Query: 221 CPIVTLCPQAS---------SEEVTRVKAAE----------RKWLNDNNICRHHILNFLS 261
PI T+ P A + EVT + AE + W + +C+ +ILN L
Sbjct: 145 APIRTVVPPAEKPRKFSCTFTNEVTPMPVAEMPDREKFMIIKAWKQADFLCKGYILNVLE 204
Query: 262 DHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNK 321
LY YS T+S KELW+ L+ Y E+ K+ V K+++++M D K+V Q EL
Sbjct: 205 HDLYNVYSAMTTS-KELWDALEKKYKTEDACLKKFVVAKFLDYKMLDSKTVGSQVQELQL 263
Query: 322 IADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
++A M++ E F ++ ++ KLP S DF
Sbjct: 264 SFHDLIADDMVVNEAFQMAAMIEKLPSSCNDF 295
>gi|38344080|emb|CAE01740.2| OSJNBb0056F09.3 [Oryza sativa Japonica Group]
Length = 366
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 119/261 (45%), Gaps = 37/261 (14%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVL-TDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
H F+G NY+ W + L L + +V P P S EE + +A++
Sbjct: 123 HAFDGSNYKKWKARTLLWLTAMHCFFVSRGKPSE-----PPLSPEEEAKFEASD------ 171
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ R +++ L D++ Y S K++W+ L+ + + G++R ++++ ++ M D
Sbjct: 172 -CLFRGVLISVLVDYIVDVY-MHMPSGKDMWDALEAKFGVSDAGSERYVMEQFYDYNMVD 229
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFT 366
++SV EQA E+ +A + + + F I++KLPLSW DF L R E+ + T
Sbjct: 230 DRSVVEQAHEIQMLAKELGNNNCELPDKFVADGIIAKLPLSWSDFATSLKHKRQEF-SIT 288
Query: 367 MLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPRMREMSKKRRESEMDSKTVV- 421
L+ + EE++R+++ + K +E + N P + K+ + ++ K
Sbjct: 289 DLIGSLGVEEKARANDNR---GKKIEGGSSANLVQKKNPHTSHNNNKKVKLDVKPKATTN 345
Query: 422 ------------CYNCRKKGH 430
C+ C K GH
Sbjct: 346 FKKKGKGKAKGDCFVCGKPGH 366
>gi|57863895|gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Japonica Group]
gi|57863849|gb|AAW56890.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1274
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ +NF I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDNFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLNVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|407922269|gb|EKG15373.1| Transcriptional coactivator p15 [Macrophomina phaseolina MS6]
Length = 158
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 70 IEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVP 129
I P + ++ GKR++D+G+ +LS KR V + EF+G++ VSIREY+ +DGK +P
Sbjct: 29 IAPKSKKTKKSQSAGKRVDDEGNDF-WELSAKRRVTVSEFRGKSMVSIREYYEKDGKDLP 87
Query: 130 TAKGIALTSEQWRAFSKSLPAIDEAVVK 157
KGI+LT +Q+ A + LP I+ A+ K
Sbjct: 88 GKKGISLTLDQYNALVELLPEIEAALAK 115
>gi|147838519|emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
Length = 1236
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 104/265 (39%), Gaps = 66/265 (24%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
L RF+G N+ W ++ LL LK+ Y+L PI+ P+ + +V AA +K D
Sbjct: 16 LDRFDGSNFTRWQDKVRFLLIALKIFYILD---PILAPLPEPKENDTPQVVAARKKREED 72
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
ICR +F+ FD
Sbjct: 73 ELICR-------------------------------------------------DFKCFD 83
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLM-RMEYLTFTM 367
EK + Q EL I + + + + F V I++KLP SWK + ++ + E +
Sbjct: 84 EKPLLPQIHELQVIVNKLKVLKIELXXAFQVGAIVAKLPSSWKGYRKRIXHKSEDYSLEE 143
Query: 368 LMDHIKAEEESRSHNKQ-EEPSKFVELSPAVNFG--PRMRE----------MSKKRRESE 414
+ H+ EEESRS +K EE + + AV+ PR + MS K+ + +
Sbjct: 144 IQKHLXIEEESRSRDKMVEESNXGTNKANAVSKXNHPRXKNNNDKXNSGNYMSPKKNQEQ 203
Query: 415 MDSKTVVCYNCRKKGHVAKHCHNKR 439
K C+ C K H + C ++
Sbjct: 204 FKGKKGPCFVCGKPEHYVRECRYRK 228
>gi|49328150|gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1229
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G N++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVNFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|62733257|gb|AAX95374.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|108864298|gb|ABA92908.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1393
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEAT------------- 58
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
+C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 59 TLCVGCILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVARCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQLGHLARKCPQRK 259
>gi|55733934|gb|AAV59441.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1225
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G N++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVNFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|62734000|gb|AAX96109.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1350
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEAT------------- 58
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
+C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 59 TLCVGCILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVARCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQLGHLARKCPQRK 259
>gi|57900690|gb|AAW57815.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1109
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 118/267 (44%), Gaps = 45/267 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPC-PIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T I+T Q EE T +
Sbjct: 12 KFTGVHFKKWQIRVTLWLTAMKCFWVSTGKSEGILTTDQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ LSD L Y T AKELW+ L + +FG + + YI ++
Sbjct: 64 --C---ILSVLSDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASIDVYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 RMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + SK + +++ +
Sbjct: 173 -SIEGLIASLDIEEKAR---EKDAASKGDGGQSSANVVHKAHNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHC 435
C+ C + GH+A+ C
Sbjct: 229 KKNNNNPNQDEGTCFVCGQPGHLARKC 255
>gi|46137341|ref|XP_390362.1| hypothetical protein FG10186.1 [Gibberella zeae PH-1]
Length = 148
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 10/104 (9%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKS 147
+DDG+ +LSNKR V + +F + FV+IREY+ +DGK +P KGI+L+ EQ+ AF K+
Sbjct: 37 DDDGNPF-WELSNKRRVGVSDFSSKTFVNIREYYEKDGKTLPGKKGISLSIEQYNAFLKA 95
Query: 148 LPAIDEAVVKMQSKLRSESSGEQNKDVANSMTSPLELFPTELHR 191
+P I+ A+ L E E+ + + +E+ PT++ R
Sbjct: 96 VPRINAAL--RAKGLVVEGDTEE-------LDTAMEMVPTKVKR 130
>gi|408397064|gb|EKJ76215.1| hypothetical protein FPSE_03690 [Fusarium pseudograminearum CS3096]
Length = 148
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 10/104 (9%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKS 147
+DDG+ +LSNKR V + +F + FV+IREY+ +DGK +P KGI+L+ EQ+ AF K+
Sbjct: 37 DDDGNPF-WELSNKRRVGVSDFSSKTFVNIREYYEKDGKTLPGKKGISLSIEQYNAFLKA 95
Query: 148 LPAIDEAVVKMQSKLRSESSGEQNKDVANSMTSPLELFPTELHR 191
+P I+ A+ L E E+ + + +E+ PT++ R
Sbjct: 96 VPRINAAL--RAKGLVVEGDTEE-------LDTAMEIVPTKVKR 130
>gi|116309544|emb|CAH66607.1| H0211A12.10 [Oryza sativa Indica Group]
Length = 1200
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 122/274 (44%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 128 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 176
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ ++++FD+
Sbjct: 177 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKIFDD 235
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ + +
Sbjct: 236 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIITKLPPSWSDFATSLKHKRQEF-SISD 294
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRR---------------- 411
L+ + EE++R+ + + K VE + N + +
Sbjct: 295 LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 351
Query: 412 ESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEIN 445
+ V C+ C K GH AK C ++ + N
Sbjct: 352 KKGKGKAKVDCFVCGKSGHWAKDCPERKDRKSAN 385
>gi|38347189|emb|CAD37106.2| OSJNBa0024J22.17 [Oryza sativa Japonica Group]
Length = 1200
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 122/274 (44%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 128 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 176
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ ++++FD+
Sbjct: 177 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKIFDD 235
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ + +
Sbjct: 236 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIITKLPPSWSDFATSLKHKRQEF-SISD 294
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRR---------------- 411
L+ + EE++R+ + + K VE + N + +
Sbjct: 295 LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 351
Query: 412 ESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEIN 445
+ V C+ C K GH AK C ++ + N
Sbjct: 352 KKGKGKAKVDCFVCGKSGHWAKDCPERKDRKSAN 385
>gi|38347007|emb|CAE02261.2| OSJNBb0058J09.8 [Oryza sativa Japonica Group]
Length = 1282
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 121/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAIKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
+C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERICFVCGQVGHLARKCPQRK 259
>gi|147781792|emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]
Length = 1096
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 22/215 (10%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCP--IVTLCPQASSEEVTRVKAAERK 244
+++ FNG ++ W +++ + + + ++L DP P L P
Sbjct: 13 SKIDPFNGTFFKRWHERVFSAIDVVNLGHILIDPKPKDGSHLLPT--------------- 57
Query: 245 WLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEF 304
W N RH I + LS+ L+ Y + AKE+W+ + Y+ E+ GT + + + F
Sbjct: 58 WETGNKQVRHAIPSTLSNELFDIYC-QFKVAKEIWDAMNKKYILEDAGTHKYVIGNFRNF 116
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYL 363
QM ++K V Q + + + + + + + E F V ++ LP SWKD+ + +M+ +
Sbjct: 117 QMTEDKDVSSQIHDYHLLINDLAIEDIKLPEPFMVGYLVETLPESWKDYKNNMKHKMKQM 176
Query: 364 TFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVN 398
+ ++ HI+ EE++R+ + E K ELS N
Sbjct: 177 SLEDVIIHIRIEEQNRNRDNIE---KAKELSSKAN 208
>gi|140068417|gb|ABE87633.2| Putative polyprotein, related [Medicago truncatula]
Length = 121
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 7/108 (6%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLN 247
+L +F+G N+ W ++++ LL LKVAYVL P+ +E +KW N
Sbjct: 14 KLEKFDGGNFIRWQKKMKFLLTTLKVAYVLN------MARPEEKDDETVAETRDRQKWDN 67
Query: 248 DNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKR 295
D+ IC HILN +SD L+ Y + + SAK+LW++L+ Y+ E+ +K+
Sbjct: 68 DDYICLRHILNGMSDSLFDIY-QSSPSAKDLWDKLETRYMREDATSKK 114
>gi|108711058|gb|ABF98853.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P I+T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGILTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAQEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|108707163|gb|ABF94958.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1104
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 116/258 (44%), Gaps = 27/258 (10%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 165 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASDY------ 214
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 215 -LFRGALISVLTDNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVIEQFYDYKMVDD 272
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFC--IKLMRMEYLTFTM 367
+SV EQ E+ +A + + + F I++KLP SW DF +K R E+ + +
Sbjct: 273 RSVVEQTHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATFLKHKRQEF-SVSD 331
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRK 427
L+D + + S N ++ + A NF ++ C+ C K
Sbjct: 332 LIDSLGKKNPHASRNNKKVKPDVKPKA-ATNF-----------KKKGKGKAKGDCFVCGK 379
Query: 428 KGHVAKHCHNKRLHQEIN 445
GH AK C ++ + N
Sbjct: 380 SGHWAKDCPERKDRKSAN 397
>gi|53981174|gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1289
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 35/266 (13%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C IL+ L D L Y T AKELW+ L + + ++++ +++M D
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDALNTKFGATDASNDLYIIEQFHDYKMADN 117
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTM 367
+SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY +
Sbjct: 118 RSVIEQAHEIQTMAKELELRKCVLPDKFVAGCIIAKLPSSWRSFGTALKHKRQEY-SVEG 176
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV------- 420
L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 177 LIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNN 233
Query: 421 -------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 234 NPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|14626276|gb|AAK71544.1|AC087852_4 putative polyprotein [Oryza sativa Japonica Group]
Length = 1308
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P I+T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGILTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAQEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|108711148|gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1460
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 35/266 (13%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C IL+ L D L Y T AKELW+ L + + ++++ +++M D
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDALNTKFGATDASNDLYIMEQFHDYKMADN 117
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTM 367
+SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY +
Sbjct: 118 RSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY-SVEG 176
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV------- 420
L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 177 LIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNN 233
Query: 421 -------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 234 NPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|19881576|gb|AAM00977.1|AC090482_6 Putative retroelement [Oryza sativa Japonica Group]
gi|31431306|gb|AAP53108.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 493
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 124/280 (44%), Gaps = 46/280 (16%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P SSEE + +A++
Sbjct: 161 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSSEEEAKFEASD------- 209
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ + +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 210 CLFQGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 268
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ + +
Sbjct: 269 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVSD 327
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + + V G + KK + ++K V
Sbjct: 328 LIGSLGVEEKARAKDVRGK---------KVKGGSSANMVQKKNPHASHNNKKVKLYVKPK 378
Query: 422 ----------------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 379 AATNFKKKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 418
>gi|158828138|gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 1034
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 85/204 (41%), Gaps = 45/204 (22%)
Query: 244 KWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIE 303
KW ND+ ICR HILN +SD L+ Y + SAKELW+ L+ Y+ E
Sbjct: 39 KWENDDYICRGHILNGMSDSLFDVY-QNVESAKELWDALESKYMAE-------------- 83
Query: 304 FQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEY 362
D S F Q M + E+ VS I+ KLP SWK F L + E
Sbjct: 84 ----DASSQFAQH-------------NMNMDESISVSCIIDKLPPSWKGFRRMLKHKKEE 126
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF-----GPRMREMSKKR------R 411
L+ L H++ EE R + K E S ++N +M+ KKR
Sbjct: 127 LSLVQLGSHLRIEESLRVQEGGKPKDKEAETS-SINMMKESGSSKMKNKGKKRPFTNNTN 185
Query: 412 ESEMDSKTVVCYNCRKKGHVAKHC 435
+ VC+ C K GH + C
Sbjct: 186 DGSNKRFKSVCWICNKPGHFKRDC 209
>gi|38344416|emb|CAE02382.2| OSJNBb0080H08.8 [Oryza sativa Japonica Group]
Length = 1183
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+ NY++W + L L ++ YV P S EE + +A++
Sbjct: 177 HAFDSSNYKIWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 225
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K +W+ L+ + + G++ ++++ +++M D+
Sbjct: 226 CLFRGALISVLADNIVDVY-MHMPSGKNMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 284
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++K P SW DF L R E+ + T
Sbjct: 285 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKFPPSWSDFATSLKHKRQEF-SVTD 343
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPRMREMSKKRRESEMDSKTVV-- 421
L+ + EE++R+ + + K +E + N P + K++
Sbjct: 344 LIGSLGVEEKARAKDNR---GKNIEGGSSANLVQNKNPHASHNNNKKKVKPDVKPKATTN 400
Query: 422 ------------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK+C +++ + N
Sbjct: 401 FKKKGKGKAKGDCFVCGKPGHWAKNCPDRKDKKSAN 436
>gi|24431600|gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
Group]
Length = 1911
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|299474487|gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 26/274 (9%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTR- 237
TS ++L +E + NG NY W + +L + +VLT+ CPQA + R
Sbjct: 3 TSIVQLLASE--KLNGDNYSAWKSNLNTILVVDDLRFVLTEE------CPQAPALNANRT 54
Query: 238 VKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQ 297
V+ A +W+ N+ R +IL ++D L ++ ++AK + + L+ ++ + +
Sbjct: 55 VREAYDRWVKANDKARVYILASMTDVLAKKHDS-IATAKGIMDSLREMFGQPSWSLRHEA 113
Query: 298 VKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIK- 356
+K +M + SV E L++ + G I E VS IL LP S+ F
Sbjct: 114 IKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIDEANQVSFILQSLPKSFVPFQTNA 173
Query: 357 -LMRMEYLTFTMLMDHIKAEEESRSHNKQEEPS------KFVELSPAVN-FGPRMREMSK 408
L ++E+ T+L + + + + S K+ E + KF+ S + N GP +M K
Sbjct: 174 SLNKIEFNLTTLLNELQRFQNLTLSKGKEVEANVAVTKRKFIRGSSSKNKVGPSKAQMKK 233
Query: 409 KRRESEMDSKTV-------VCYNCRKKGHVAKHC 435
K + ++ V C++C + GH ++C
Sbjct: 234 KGKGKAPNTSKVKKNADKGKCFHCNQDGHWKRNC 267
>gi|68611257|emb|CAE01619.3| OSJNBa0042L16.8 [Oryza sativa Japonica Group]
Length = 1110
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 37/275 (13%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 107 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 155
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G+ ++++ +++M D+
Sbjct: 156 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSALYVMEQFYDYKMVDD 214
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV E A E+ +A + + + F V I++KLP SW DF L R E+ + +
Sbjct: 215 RSVVE-AHEIQMLAKELENNNCELPDKFVVGGIIAKLPPSWSDFATSLKHKRQEF-SVSD 272
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPRMREMSKKRRESEMDSKTVV-- 421
+ + EE++R+ + + K VE + N P + +KK + ++ SK
Sbjct: 273 FIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHVSHNNKKVK-PDVKSKAATNF 328
Query: 422 -----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 329 KKKGKRKAKGDCFVCGKSGHWAKDCPERKDRKSAN 363
>gi|38346634|emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
Length = 1319
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|62701755|gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|62733724|gb|AAX95834.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|77550359|gb|ABA93156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1277
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNKNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|38345215|emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
Length = 1302
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|77555142|gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|32488578|emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group]
gi|38345937|emb|CAD41412.2| OSJNBb0078D11.12 [Oryza sativa Japonica Group]
Length = 1320
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|77548453|gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|38344706|emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group]
Length = 1321
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 120/276 (43%), Gaps = 38/276 (13%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 45 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 93
Query: 250 NICRHHILNFLSDHLY--YQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMF 307
+ R +++ L+D++ Y Y S KE+W+ L+ + + G++ ++++ +++M
Sbjct: 94 CLFRGALISVLADNIVDVYMY---MPSGKEMWDALEAKFGVSDAGSELYVMEQFYDYKMV 150
Query: 308 DEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTF 365
D++S+ EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 151 DDRSIVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SV 209
Query: 366 TMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV---- 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 210 PDLIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATN 266
Query: 422 ------------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 267 FKKKSKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 302
>gi|50080271|gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53749238|gb|AAU90098.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1320
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|62734723|gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1320
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|50511444|gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
gi|51854387|gb|AAU10767.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1320
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|37718811|gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
Length = 1302
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|39545722|emb|CAD40924.3| OSJNBa0033G16.12 [Oryza sativa Japonica Group]
Length = 1320
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNKNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|37718845|gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|32489125|emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
Length = 1320
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQIGHLARKCPQRK 259
>gi|108708907|gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1518
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 228 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 279
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 280 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 328
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 329 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 388
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 389 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 444
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 445 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 475
>gi|30089754|gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1302
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|77557040|gb|ABA99836.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1302
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIKTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGAALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|47900532|gb|AAT39267.1| putative polyprotein [Oryza sativa Japonica Group]
gi|50878407|gb|AAT85181.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1297
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 45/267 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK++ +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKEKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHC 435
C+ C + GH+A+ C
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKC 255
>gi|77553063|gb|ABA95859.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 503
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 118/256 (46%), Gaps = 29/256 (11%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 52 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEVKFEASD------- 100
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 101 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVFDTGSELYVMEQFYDYKMVDD 159
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTML 368
+SV EQA E+ +A + + + F I++KLP SW DF L + + + L
Sbjct: 160 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVIDL 219
Query: 369 MDHIKAEEESRSHN----KQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV--- 421
+ + EE++R+ + K++ P A + +++ K + + K
Sbjct: 220 IGSLGVEEKARAKDIWGKKKKNPH-------ASHNNKKVKHDVKPKATTNFKKKGKGKAK 272
Query: 422 --CYNCRKKGHVAKHC 435
C+ C K GH AK C
Sbjct: 273 GDCFVCGKPGHWAKDC 288
>gi|77551574|gb|ABA94371.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1239
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 120/274 (43%), Gaps = 45/274 (16%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + KA++
Sbjct: 95 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFKASD------- 143
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 144 CLFRGALISVLADNIVDVY-MHMPFGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 202
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTML 368
+SV EQA E+ + + + + F I++KLP SW DF L + + + + L
Sbjct: 203 RSVVEQAHEIQMLTKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVSDL 262
Query: 369 MDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------- 421
+ + EE++R+ ++ K VE + N + KK R + ++ V
Sbjct: 263 IGSLGVEEKARA---KDNWGKKVEGGSSANM------VQKKNRHASHNNNKKVKPDVKPK 313
Query: 422 ----------------CYNCRKKGHVAKHCHNKR 439
C+ C K GH AK C ++
Sbjct: 314 VATNFKKKGKGKAKGDCFVCGKSGHWAKDCPERK 347
>gi|15144313|gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Japonica Group]
Length = 1308
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKVLELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|108862657|gb|ABA98136.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1249
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|110289385|gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKVLELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|51038138|gb|AAT93941.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1433
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKYFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|108710670|gb|ABF98465.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1210
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 35/266 (13%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C IL+ L D L Y T AKELW+ L + + ++++ +++M D
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDALNTKFGATDASNDLYIMEQFHDYKMADN 117
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTM 367
+SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY +
Sbjct: 118 RSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY-SVEG 176
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV------- 420
L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 177 LIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNN 233
Query: 421 -------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 234 NPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|77555759|gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1361
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 97 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 148
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 149 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 197
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 198 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 257
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 258 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 313
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 314 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 344
>gi|108862766|gb|ABA98797.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1243
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 121/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNHSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK++ +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKEKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C +++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPHRK 259
>gi|108862305|gb|ABA96095.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 585
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 35/266 (13%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C IL+ L D L Y T AKELW+ L + + ++++ +++M D
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDALNTKFGATDASNDLYIMEQFHDYKMADN 117
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTM 367
+SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY +
Sbjct: 118 RSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY-SVEG 176
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV------- 420
L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 177 LIASLDVEEKAR---EKDAASKGDGGQSSANIVHKAQNKSKGKYKAQQTTNFKKQKKNNN 233
Query: 421 -------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 234 NPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|77550728|gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1235
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLLDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSSNVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|218184065|gb|EEC66492.1| hypothetical protein OsI_32588 [Oryza sativa Indica Group]
Length = 374
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 122/274 (44%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV L P EE + +A++
Sbjct: 26 HAFDGSNYKRWKTRALLWLTAMQCFYVSRGKQSEPPLSP----EEEAKFEASD------- 74
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 75 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 133
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP +W DF L R E+ + +
Sbjct: 134 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPTWSDFATSLKHKRQEF-SVSD 192
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPRMREMSKKRRESEMDSKTV--- 420
L+ + EE++R+ + + K VE + N P +KK +
Sbjct: 193 LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 249
Query: 421 ---------VCYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 250 KKGKGKAKGYCFVCGKSGHWAKDCPERKDRKSAN 283
>gi|13937286|gb|AAK50117.1|AC087797_2 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1198
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 35/266 (13%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C IL+ L D L Y T AKELW+ L + + ++++ +++M D
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDALNTKFGATDASNDLYIMEQFHDYKMADN 117
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTM 367
+SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY +
Sbjct: 118 RSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY-SVEG 176
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV------- 420
L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 177 LIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNN 233
Query: 421 -------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 234 NPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|51038137|gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1861
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 426 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 477
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 478 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 526
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 527 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 586
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 587 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 642
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 643 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 673
>gi|77550993|gb|ABA93790.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1370
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 41/268 (15%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYV-LTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
H F+G NY+ W + L L + +V P P S +E +AA+
Sbjct: 130 HAFDGSNYKRWKARTLLWLTAMHCFFVSWGKPSE-----PPLSPKEEAMFEAAD------ 178
Query: 249 NNICRHH--ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
C H +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M
Sbjct: 179 ---CLFHGALISVLTDNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKM 234
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLT 364
D++SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 235 VDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWTDFATSLKHKRQEF-S 293
Query: 365 FTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPRMREMSKKRRESEMDSKTV 420
T L+ + EE++R+ ++ K +E + N P + K+ + ++ K
Sbjct: 294 ITDLIGSLSVEEKARA---KDNWGKKIEGGSSANLVQKKNPHASHNNNKKVKPDVKPKAT 350
Query: 421 V-------------CYNCRKKGHVAKHC 435
C+ C K GH AK C
Sbjct: 351 TNFKKKGKGKTKGGCFMCGKSGHWAKDC 378
>gi|77553983|gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1468
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 114/270 (42%), Gaps = 51/270 (18%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 99 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 150
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 151 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 199
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 200 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 259
Query: 363 LTFTMLMDHIKAEEESRS-----------------HNKQEEPSKFVELSPAVNFGPRMRE 405
+ L+ + EE++R H Q + + NF ++
Sbjct: 260 -SVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNF----KK 314
Query: 406 MSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
K D +T C+ C + GH+A+ C
Sbjct: 315 QKKNNINPNQDERT--CFVCGQVGHLARKC 342
>gi|31432272|gb|AAP53927.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1297
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 45/267 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHC 435
C+ C + GH+A+ C
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKC 255
>gi|77554076|gb|ABA96872.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 732
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
N + R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D
Sbjct: 28 NCLFRGALISVLADNIVDVYI-HMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVD 86
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTML 368
++SV EQA E+ +A + + + F I++KLP SW DF L + + + L
Sbjct: 87 DRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKQEFSVSDL 146
Query: 369 MDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMR-EMSKKRRESEMDSKTVV------ 421
+ + EE++R+ + + K VE + N + S ++ ++D K
Sbjct: 147 IGSLGVEEKARAKDNR---GKKVEGGSSANMVQKKNPHASHNNKKVKLDGKPKATTNFKK 203
Query: 422 ---------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 204 KGKGKAKEDCFVCGKSGHWAKDCPERKERKSAN 236
>gi|38346534|emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
Length = 1319
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ + L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTMWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|41469360|gb|AAS07202.1| putative integrase [Oryza sativa Japonica Group]
gi|108708916|gb|ABF96711.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1456
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 168 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 216
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 217 CLFRGALISVLADNIVDVY-MHMPSGKDMWDSLEAKFGVSDAGSELYVMEQFYDYKMVDD 275
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 276 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVPD 334
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 335 LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 391
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 392 KKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 425
>gi|77548324|gb|ABA91121.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1186
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 118/273 (43%), Gaps = 32/273 (11%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 168 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 216
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 217 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 275
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTML 368
+SV EQA E+ +A + + + F I++KLP SW DF L + + + L
Sbjct: 276 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPDL 335
Query: 369 MDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------- 421
+ + EE++R+ + + K VE + N + + +
Sbjct: 336 IGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKVATNFKK 392
Query: 422 ---------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 393 KGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 425
>gi|108710065|gb|ABF97860.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 661
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 382 KFTGVHFKRWQIRVTLSLTAMKCFWVSTGKPERVLTAEQQKQFEEATTLFVG-------- 433
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 434 --C---ILSVLGDRLVEMYMHMTD-AKELWDAL-----NTKFGATDASNNLYIMEQFHDY 482
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 483 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 542
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 543 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 598
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 599 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 629
>gi|77556089|gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1452
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 168 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 216
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 217 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 275
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 276 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVPD 334
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 335 LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 391
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 392 KKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 425
>gi|20303592|gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
Length = 1394
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 106 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 154
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 155 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGISDAGSELYVMEQFYDYKMVDD 213
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 214 RSVVEQAHEIQMLAKELENNNCELPDKFVAGDIIAKLPPSWSDFATSLKHKRQEF-SVPD 272
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 273 LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 329
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 330 KKSKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 363
>gi|116309875|emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group]
Length = 1413
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 125 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 173
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 174 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 232
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 233 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVPD 291
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 292 LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 348
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 349 KKSKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 382
>gi|77555288|gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1298
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 125 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 173
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 174 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 232
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 233 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVPD 291
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 292 LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 348
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 349 KKSKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 382
>gi|54291731|gb|AAV32100.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1388
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 155 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 203
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 204 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 262
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 263 RSVVEQAHEIQMLAKELENNNYELPDKFVAGGIIAKLPHSWSDFATSLKHKRQEF-SVPD 321
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 322 LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 378
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 379 KKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 412
>gi|31432391|gb|AAP54028.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1361
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 147 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEDAKFEASD------- 195
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 196 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 254
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 255 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVPD 313
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 314 LIGSLGVEEKARAKDIR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 370
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 371 KKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 404
>gi|77554328|gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1453
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 165 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 213
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 214 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYIMEQFYDYKMVDD 272
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 273 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVPD 331
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 332 LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 388
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 389 KKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 422
>gi|77555429|gb|ABA98225.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1199
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A+ D
Sbjct: 121 HAFDGPNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEAS------DC 170
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C ++N L+D++ Y S K++W+ LK + + G++ ++++ +++M D+
Sbjct: 171 LFC-GALINVLADNIVDVY-MHMPSGKDMWDALKAKFGVSDAGSELYVMEQFYDYKMVDD 228
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ + +
Sbjct: 229 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVSD 287
Query: 368 LMDHIKAEEESRSHN 382
L+ + EE++R+ +
Sbjct: 288 LIGSLGVEEKARAKD 302
>gi|77548605|gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2027
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 207 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 258
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW L + +FG + YI ++
Sbjct: 259 --C---ILSVLGDRLVEVYMHMTD-AKELWYAL-----NTKFGATDASNDLYIMEQFHDY 307
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 308 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 367
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 368 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 423
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 424 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 454
>gi|77555989|gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1303
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 125 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 173
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 174 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 232
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 233 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVPD 291
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 292 LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 348
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 349 KKSKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 382
>gi|77557017|gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1448
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 160 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 208
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D
Sbjct: 209 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDN 267
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ + +
Sbjct: 268 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVSD 326
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 327 LIGSLGVEEKARAKDVR---GKKVEGCSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 383
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 384 KKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 417
>gi|108711361|gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1413
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 125 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 173
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 174 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGISDAGSELYVMEQFYDYKMVDD 232
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 233 RSVVEQAHEIQMLAKELENNNCELPDKFVAGDIIAKLPPSWSDFATSLKHKRQEF-SVPD 291
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 292 LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 348
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 349 KKSKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 382
>gi|77552577|gb|ABA95374.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1314
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 152 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 200
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 201 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 259
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 260 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVPD 318
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + E+++R+ + Q K VE + N + + +
Sbjct: 319 LIGSLGVEKKARAKDVQ---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKTATNFK 375
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 376 KKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 409
>gi|108862128|gb|ABG21864.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1297
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 117/273 (42%), Gaps = 32/273 (11%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 82 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 130
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 131 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 189
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTML 368
SV EQA E+ +A + + + F I++KLP SW DF L + + + L
Sbjct: 190 HSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPDL 249
Query: 369 MDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------- 421
+ + EE++R+ + + K VE + N + + +
Sbjct: 250 IGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKK 306
Query: 422 ---------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 307 KGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 339
>gi|77556955|gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1805
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 497 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 548
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 549 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 597
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M + +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 598 KMANNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 657
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 658 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 713
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 714 KKNNNNPNQDERTCFVCSQVGHLARKCPQRK 744
>gi|54287603|gb|AAV31347.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1059
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 35/266 (13%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPC-PIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T ++T Q EE T +
Sbjct: 135 KFTGVHFKRWQIRVTLWLTTMKCFWVSTGKSEGVLTAEQQKQFEEATTLFVG-------- 186
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C IL+ L D L Y T AKELW+ L + + +K++ +++M D
Sbjct: 187 --C---ILSVLGDRLVEVYMHMTD-AKELWDALNTKFGATDASNDLYIMKQFHDYKMADN 240
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTM 367
+SV EQA E+ +A + ++ + F I+ KLP SW+ F +K R EY +
Sbjct: 241 RSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIVKLPPSWRSFGTALKHKRQEY-SVEG 299
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV------- 420
L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 300 LIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNN 356
Query: 421 -------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 357 NPNQDERTCFVCGQVGHLARKCPQRK 382
>gi|108863988|gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEEVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + S + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSNGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|48475093|gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T A ELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-ANELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPSSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKDDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCSQRK 259
>gi|50080289|gb|AAT69624.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1401
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 38/266 (14%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 162 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 210
Query: 250 NICRHH--ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMF 307
C H +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M
Sbjct: 211 --CLFHGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMV 267
Query: 308 DEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTF 365
D++SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 268 DDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SV 326
Query: 366 TMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV---- 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 327 PDLIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATN 383
Query: 422 ------------CYNCRKKGHVAKHC 435
C+ C K GH AK C
Sbjct: 384 FKKKGKGKTKGDCFVCGKSGHWAKDC 409
>gi|77551169|gb|ABA93966.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1212
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G ++ W ++ L L +K +V T P ++ Q +E T +
Sbjct: 12 KFTGMLFKRWQIRVTLWLTAMKCFWVSTSKPMGVLNADQQKEFDEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T + KELW+ L + EFG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTDT-KELWDAL-----NTEFGATDASNDMYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLLDKFVAGCIIAKLPPSWRGFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSNANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQPGHLARKCPQRK 259
>gi|38344281|emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group]
Length = 1264
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSILGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D + V EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRFVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|38344663|emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
Length = 1342
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFRVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKSDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|108709742|gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1397
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 89 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 140
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 141 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 189
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV E A E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 190 KMADNRSVVEHAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKRKRQEY 249
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 250 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 305
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 306 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 336
>gi|91088421|ref|XP_967011.1| PREDICTED: similar to p31A, putative [Tribolium castaneum]
gi|270012200|gb|EFA08648.1| hypothetical protein TcasGA2_TC006312 [Tribolium castaneum]
Length = 106
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 61 STTESTDNRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREY 120
S T +D+ E V++Q+ Q + + D D L R V + EFKG+ +V+IRE+
Sbjct: 10 SDTSDSDSGPEDRGPVKKQKTQ--NKSSGDSDENSWDLGKNRFVKLTEFKGKWYVNIREF 67
Query: 121 FRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
+ DG+L P KGI LT EQW F + +P +++A+
Sbjct: 68 YNADGELRPGKKGIMLTMEQWHKFKEVMPELEDAI 102
>gi|62734114|gb|AAX96223.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|77549882|gb|ABA92679.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1302
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AK+LW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKKLWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDVASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|40538957|gb|AAR87214.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1393
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 89 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 140
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 141 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 189
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV E A E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 190 KMADNRSVVEHAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKRKRQEY 249
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 250 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 305
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 306 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 336
>gi|32487304|emb|CAE05795.1| OSJNBb0046K02.5 [Oryza sativa Japonica Group]
Length = 1356
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFRVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAR---EKDAASKSDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|220966840|gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 123/262 (46%), Gaps = 38/262 (14%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPC-PIVTLCPQASSEEVTRVKAAERKWL 246
E+ +FNG N+ +W +I+ +L++ D C P + P +++ +RK +
Sbjct: 6 EIPKFNGSNFSLWKLKIKAILRK--------DNCLPAIDGRPADITDD-------KRKEM 50
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+DN + H+ ++D + +++ +AK++W+ L +Y + + ++ F+M
Sbjct: 51 DDNAVANLHLA--VADSVLSSIAEK-KTAKKIWDTLIQLYEVKSLHNRIFLKRRLYTFRM 107
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMR---MEYL 363
+ S+ + LN + + A+ I EN V+L LP S+ I + ++ L
Sbjct: 108 SESTSMPDHINNLNTMFAQLSASDFTIGENERAEVLLQSLPDSYDQLVINITNNNIVDRL 167
Query: 364 TFTMLMDHIKAEEESRSHNKQ--EEPSKFVEL-----SPAVNFGPRMRE---MSKKRRES 413
+F + I EEESR NK+ ++ SK +E + GP + S RR++
Sbjct: 168 SFNDVAGAI-LEEESRRKNKEDRQDSSKQMEALTVTRGRSTERGPSGSQNHGRSTSRRKT 226
Query: 414 EMDSKTVVCYNCRKKGHVAKHC 435
+ CYNC K+GH+ K C
Sbjct: 227 NLK-----CYNCGKRGHLKKDC 243
>gi|110289158|gb|ABB47727.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 895
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 118/271 (43%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI +
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNGLYIMEQFHNY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTTLKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ EE++R +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASFDVEEKAR---EKDAASKGDGGQSSTNVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQLGHLARKCPQRK 259
>gi|77554789|gb|ABA97585.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 401
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 122/277 (44%), Gaps = 39/277 (14%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLND 248
H F+G +Y+ W + L L + +V D P P S +E + +A +
Sbjct: 130 HAFDGSSYKRWKARALLWLMVMHCFFVSRDKPSE-----PLLSPDEEAKFEATD------ 178
Query: 249 NNICRHH--ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
C H +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M
Sbjct: 179 ---CLFHGALISVLADNIVDVY-MHIPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKM 234
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTF 365
D++SV EQA E+ + + + E F I++ +P SW DF + + + +
Sbjct: 235 VDDRSVVEQAHEIQILVKELEKNNCDLPEKFVAGGIIANMPPSWSDFATSVKHKRQAFSV 294
Query: 366 TMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPRMREMSKKRRESEMDSKTVV 421
T L+ + EE++R+ + + K +E + N P + ++ + ++ K
Sbjct: 295 TDLIGSLGIEEKARAKDNR---GKNIEEGFSANLVQKKNPHASHNNNQKVKPDVKPKATT 351
Query: 422 -------------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 352 NFKKKGKGKAKGDCFVCGKPGHWAKDCPERKDKKSAN 388
>gi|358388648|gb|EHK26241.1| hypothetical protein TRIVIDRAFT_36126 [Trichoderma virens Gv29-8]
Length = 151
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSL 148
DD + +LSNKR V + +FK FV+IREY+ +DGK++P KGI+L+ EQ+ A K+
Sbjct: 40 DDEGNPFWELSNKRRVGVSQFKKMCFVNIREYYEKDGKMLPGKKGISLSVEQYLALIKAA 99
Query: 149 PAIDEAV 155
P I+ A+
Sbjct: 100 PGINAAL 106
>gi|77550940|gb|ABA93737.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1579
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 118/271 (43%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 312 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPVGVLTAEQQKQFEEATTLFVG-------- 363
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 364 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 412
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F K R EY
Sbjct: 413 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTAFKYKRQEY 472
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 473 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 528
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + H+A+ C ++
Sbjct: 529 KKNNNNPNQDERTCFVCGQVRHLARKCPQRK 559
>gi|220966838|gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 36/271 (13%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLN 247
E+ +FNG+N+ +W +I +L++ C A + + + K ++
Sbjct: 6 EIEKFNGRNFSLWKLKIRAILRKDN--------------CLDAIDGRLADITDEKWKEMD 51
Query: 248 DNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMF 307
DN + H+ ++D + +++ +AKE+W+ L +Y + + ++ QM
Sbjct: 52 DNAVANLHLA--MADSVLSSIAEK-KTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLQMG 108
Query: 308 DEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTM 367
+ SV + LN + + A+ I +N ++L LP S+ D I + + T+
Sbjct: 109 ESTSVTDHINTLNTLFSQLTASDFKIAKNERAELLLQSLPDSY-DQLIINITNNNIADTL 167
Query: 368 LMDHIKA---EEESRSHNKQE--EPSKFVEL-----SPAVNFGPRMRE---MSKKRRESE 414
D + EEESR NK+E E SK E + GP + SK RR+
Sbjct: 168 HFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRK-- 225
Query: 415 MDSKTVVCYNCRKKGHVAKHCHNKRLHQEIN 445
K + CY C KGHV K C N + + E N
Sbjct: 226 ---KNIKCYGCGMKGHVKKECWNIKKNGEKN 253
>gi|49328112|gb|AAT58810.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1320
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTSMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++ +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAW---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|302912967|ref|XP_003050815.1| hypothetical protein NECHADRAFT_100558 [Nectria haematococca mpVI
77-13-4]
gi|256731753|gb|EEU45102.1| hypothetical protein NECHADRAFT_100558 [Nectria haematococca mpVI
77-13-4]
Length = 151
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSL 148
DD +LSNKR + + +FK +F++IREY+ +DGK +P KGI+L+ +Q+ A K++
Sbjct: 41 DDEGHPYWELSNKRRIGVSQFKKMSFINIREYYDKDGKTLPGKKGISLSVDQYNALIKAI 100
Query: 149 PAIDEAVVKMQSKLRSESSGEQNKDVANSMTSPL 182
PAI+ A+ K+ E+ +D A S P+
Sbjct: 101 PAINAALRAQGEKV------EEPEDEAESALVPV 128
>gi|47777367|gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group]
Length = 1297
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTSMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++ +++ SK + N + + SK + +++ +
Sbjct: 173 -SVEGLIASLDVEEKAW---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 228
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 229 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 259
>gi|16924041|gb|AAL31653.1|AC079179_8 Putative polyprotein from transposon TNT [Oryza sativa]
gi|31429907|gb|AAP51896.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1342
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 165 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSKPPLSPEEEAKFEASD------- 213
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 214 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 272
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 273 RSVVEQAHEIQMLAKKLENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVPD 331
Query: 368 LMDHIKAEEESRSHN 382
L+ + EE++R+ +
Sbjct: 332 LIGSLGVEEKARAKD 346
>gi|31126728|gb|AAP44650.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 566
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 28/197 (14%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P I+T+ Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGILTVDQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATNASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV E+A E+ IA + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEEAHEIQTIAKELELLKCVLPDKFVAGCIIAKLPPSWRSFSTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESR 379
+ L+ + EE++R
Sbjct: 173 -SVEGLIASLDVEEKAR 188
>gi|159489775|ref|XP_001702870.1| predicted protein [Chlamydomonas reinhardtii]
gi|158270998|gb|EDO96827.1| predicted protein [Chlamydomonas reinhardtii]
Length = 221
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEA 154
+ +LS KR V++ EFKG +V +RE++ +DG+L+P AKG+++ + QW A P + A
Sbjct: 157 VLQLSGKRRVSLSEFKGAVYVGVREFYEKDGQLLPGAKGLSMNAAQWAALVAGAPGFNAA 216
Query: 155 V 155
+
Sbjct: 217 L 217
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 27/162 (16%)
Query: 7 GRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLSTTEST 66
G ++Q V+E LK +DM TE V + L + +K + ++ +L +
Sbjct: 6 GIVKQAVLEFLKTADMNVTTERTVLNHLAATLQLSQEVKAYKAVVSATIDDYLSA----- 60
Query: 67 DNRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGK 126
L+ E + ++ DG+ ++ +++ +G ++ +REY+ +DG+
Sbjct: 61 -------LDDAEDEEEAAEQEEKDGEDA----PTQKGLSMDPGQGTYYLGLREYYEKDGQ 109
Query: 127 LVP-----------TAKGIALTSEQWRAFSKSLPAIDEAVVK 157
L+P KGIAL W +LPAI A+ K
Sbjct: 110 LLPGKKGKDGQKLPGKKGIALAPADWATMCAALPAISSALAK 151
>gi|21742763|emb|CAD40519.1| OSJNBa0023J03.5 [Oryza sativa Japonica Group]
Length = 1108
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W ++ L L ++ YV P S EE +A+ D
Sbjct: 164 HAFDGSNYKRWKARVLLWLTAMQCFYVSRGK----RSEPPLSPEEEANFEAS------DC 213
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 214 LFCGA-LISVLADNIVDVY-MHMPSRKDMWDALEAKFGVSDTGSELYVMEQFYDYKMVDD 271
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTML 368
+SV EQA E+ +A + + + F I++KLP SW DF L + + + + L
Sbjct: 272 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVSDL 331
Query: 369 MDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPRMREMSKKRRESEMDSKTVV--- 421
+ + EE++R+ + + K VE + N P +KK + S++ K
Sbjct: 332 IGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVK-SDVKPKAATNFK 387
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ K GH AK C ++ + N
Sbjct: 388 KKGKGKAKGDCFVYGKYGHWAKDCPERKDRKSAN 421
>gi|62734178|gb|AAX96287.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|62734227|gb|AAX96336.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|77549796|gb|ABA92593.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1099
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 146 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----QSEPPLSPEEEAKFEASD------- 194
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ ++++ D+
Sbjct: 195 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKIVDD 253
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW D L R E+ + +
Sbjct: 254 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDLATSLKHKRQEF-SVSD 312
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 313 LIGSLGVEEKARTKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 369
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 370 NKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 403
>gi|77553454|gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 125 HDFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 173
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 174 CLFRGALISVLADNIVDVY-MHMPSRKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 232
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 233 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVPD 291
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 292 LIGSLGVEEKARAKDVR---GKKVEGGCSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 348
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 349 KKSKGKAKGDCFVCGKSGHWAKDCPERKDKKSAN 382
>gi|220966833|gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 42/274 (15%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPC-PIVTLCPQASSEEVTRVKAAERKW- 245
E+ +FNG+N+ +W +I +L++ D C + P ++E KW
Sbjct: 6 EIEKFNGRNFSLWKLKIRAILRK--------DNCLDAIDGRPADITDE---------KWK 48
Query: 246 -LNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEF 304
++DN + H+ ++D + +++ +AKE+W+ L +Y + + ++
Sbjct: 49 EMDDNAVANLHLA--MADSVLSSIAEK-KTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTL 105
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLT 364
+M + SV + LN + + A+ I EN ++L LP S+ D I + +
Sbjct: 106 RMGESTSVTDHINTLNTLFSQLTASDFKIAENERAELLLQSLPDSY-DQLIINITNNNIA 164
Query: 365 FTMLMDHIKA---EEESRSHNKQE--EPSKFVEL-----SPAVNFGPRMRE---MSKKRR 411
T+ D + EEESR NK+E E SK E + GP + SK RR
Sbjct: 165 DTLHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRR 224
Query: 412 ESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEIN 445
+ K + CY C KGHV K C N + + E N
Sbjct: 225 K-----KNIKCYGCGMKGHVKKECWNIKKNGEKN 253
>gi|260799214|ref|XP_002594592.1| hypothetical protein BRAFLDRAFT_217668 [Branchiostoma floridae]
gi|229279827|gb|EEN50603.1| hypothetical protein BRAFLDRAFT_217668 [Branchiostoma floridae]
Length = 65
Score = 65.9 bits (159), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 44/62 (70%)
Query: 97 KLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVV 156
+LSNKR V+++EFKG+ + IREY+ G+L P KGI+LT++QWR +++ IDE +
Sbjct: 2 QLSNKRYVSVREFKGKCLIDIREYYDAGGELKPGKKGISLTTDQWRRLKEAVDDIDEKIA 61
Query: 157 KM 158
+
Sbjct: 62 DL 63
>gi|116309085|emb|CAH66193.1| OSIGBa0144J05.5 [Oryza sativa Indica Group]
gi|116309103|emb|CAH66209.1| OSIGBa0096F13.4 [Oryza sativa Indica Group]
Length = 1147
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 36/265 (13%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W ++ L L ++ YV P S EE +A+ D
Sbjct: 164 HAFDGSNYKRWKARVLLWLTAMQCFYVSRGK----RSEPPLSPEEEANFEAS------DC 213
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 214 LFCGA-LISVLADNIVDVY-MHMPSRKDMWDALEAKFGVSDTGSELYVMEQFYDYKMVDD 271
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ + +
Sbjct: 272 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVSD 330
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPRMREMSKKRRESEMDSKTVV-- 421
L+ + EE++R+ + + K VE + N P +KK + S++ K
Sbjct: 331 LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVK-SDVKPKAATNF 386
Query: 422 -----------CYNCRKKGHVAKHC 435
C+ K GH AK C
Sbjct: 387 KKKGKGKAKGDCFVYGKYGHWAKDC 411
>gi|31712063|gb|AAP68369.1| putative polyprotein, 3'-partial [Oryza sativa Japonica Group]
Length = 691
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 35/260 (13%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAKQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C IL+ L D L Y T AKELW+ L + + ++++ +++M D
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDALNTKFGATDASNDLYIMEQFHDYKMADN 117
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTM 367
+SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY +
Sbjct: 118 RSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY-SVEG 176
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV------- 420
L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 177 LIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNN 233
Query: 421 -------VCYNCRKKGHVAK 433
C+ C + GH+A+
Sbjct: 234 NPNQDERTCFVCGQVGHLAR 253
>gi|220966830|gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 123/274 (44%), Gaps = 42/274 (15%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPC-PIVTLCPQASSEEVTRVKAAERKW- 245
E+ +FNG+N+ +W +I +L++ D C + P ++E KW
Sbjct: 6 EIEKFNGRNFSLWKLKIRAILRK--------DNCLDAIDGRPADITDE---------KWK 48
Query: 246 -LNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEF 304
++DN + H+ ++D + +++ +AKE+W+ L +Y + + ++
Sbjct: 49 EMDDNAVANLHLA--MADSVLSSIAEK-KTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTL 105
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLT 364
+M + SV + LN + + A+ I EN ++L LP S+ D I + +T
Sbjct: 106 RMGESTSVTDHINTLNTLFSQLTASDFKIAENERAELLLQSLPDSY-DQLIINITNNNIT 164
Query: 365 FTMLMDHIKA---EEESRSHNKQE--EPSKFVEL-----SPAVNFGPRMRE---MSKKRR 411
T+ D + EEESR NK+E E SK E + GP + SK RR
Sbjct: 165 DTLHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRR 224
Query: 412 ESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEIN 445
+ K + CY C KGHV K C N + + E N
Sbjct: 225 K-----KNIKCYGCGMKGHVKKECWNIKKNGEKN 253
>gi|108710304|gb|ABF98099.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 504
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 28/197 (14%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P I+T+ Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGILTVDQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATNASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV E+A E+ IA + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEEAHEIQTIAKELELLKCVLPDKFVAGCIIAKLPPSWRSFSTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESR 379
+ L+ + EE++R
Sbjct: 173 -SVEGLIASLDVEEKAR 188
>gi|162809318|dbj|BAF95583.1| putative RNA polymerase II transcriptional coactivator [Antheraea
yamamai]
Length = 83
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 78 EQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALT 137
E++A++G R +D + + L K+ V ++EFKG+ +V IRE++ ++G+L+P KGI++T
Sbjct: 4 EKKAKMGSRTDDKEPTWV--LEGKKLVKVREFKGKVYVDIREFYEKNGELLPGKKGISMT 61
Query: 138 SEQWRAF 144
EQWR
Sbjct: 62 PEQWRKL 68
>gi|110289417|gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1457
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 46/280 (16%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV + E E K+ +
Sbjct: 169 HAFDGSNYKRWKARALLWLTAMQCFYV-----------SRGKRSEPPLSPDEEAKFEASD 217
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 218 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 276
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW D L R E+ +
Sbjct: 277 RSVVEQAYEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDLATSLKHKRQEF-SVPD 335
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R +K+V V G + KK + ++K V
Sbjct: 336 LIGSLGVEEKAR--------AKYVR-GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPK 386
Query: 422 ----------------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 387 AATNFKKKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 426
>gi|342887565|gb|EGU87047.1| hypothetical protein FOXB_02441 [Fusarium oxysporum Fo5176]
Length = 148
Score = 65.5 bits (158), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 65 STDNRIEPDLEVEEQRAQIGKRINDDGD----SIICKLSNKRTVAIQEFKGRAFVSIREY 120
+ D+ EP E +R + G + DG + +LSNKR V + +F + FV+IREY
Sbjct: 11 AADSDSEP--ETVSKRVKSGTSVESDGKDDDGNPYWELSNKRRVGVSDFSKKTFVNIREY 68
Query: 121 FRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
+ +DGK +P KGI+L+ EQ+ AF K++P I+ A+
Sbjct: 69 YDKDGKTLPGKKGISLSIEQYNAFLKAVPHINAAL 103
>gi|357618935|gb|EHJ71719.1| putative RNA polymerase II transcriptional coactivator [Danaus
plexippus]
Length = 106
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 78 EQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALT 137
E++A++G R +D + + L K+ V ++EFKGR F+ IRE++ ++G+L+P KGI+LT
Sbjct: 27 EKKAKMGSRTDDKEPTWV--LEGKKLVKVREFKGRVFIDIREFYEKNGELLPGKKGISLT 84
Query: 138 SEQWRAFSKSLPAIDEAV 155
+ WR I+E V
Sbjct: 85 PDMWRKLLSLGDEINETV 102
>gi|340517584|gb|EGR47828.1| predicted protein [Trichoderma reesei QM6a]
Length = 151
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSL 148
DD + +LSNKR V + +FK V+IREY+ +DGK++P KGI+L+ EQ+ A K+
Sbjct: 40 DDEGNPYWELSNKRRVGVSQFKKMCLVNIREYYEKDGKMLPGKKGISLSVEQYLALIKAA 99
Query: 149 PAIDEAVVKM 158
P I+ A+ M
Sbjct: 100 PGINAALRAM 109
>gi|322697925|gb|EFY89700.1| Transcriptional Coactivator p15 family protein [Metarhizium acridum
CQMa 102]
Length = 148
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSL 148
DD + +LSNKR V + +FK V++REY+ +DGK++P KGI+L+ Q+ A K+
Sbjct: 37 DDEGNPFWELSNKRRVGVSQFKNMCLVNVREYYEKDGKMLPGKKGISLSVAQYTALLKAA 96
Query: 149 PAIDEAVVKM 158
P I+ A+ +M
Sbjct: 97 PGINAALRQM 106
>gi|170058353|ref|XP_001864885.1| peptidase [Culex quinquefasciatus]
gi|167877465|gb|EDS40848.1| peptidase [Culex quinquefasciatus]
Length = 325
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE------------- 234
++ + N +N+ +W ++EL L + K+ V+ +P P L P A S +
Sbjct: 5 KIEKLNDQNFEIWKFRMELKLTKEKLIKVVLEPKP--RLKPVAGSGQTEATGDQTDAAAA 62
Query: 235 -VTRVKAAE-RKWLNDNNICRHHI-LNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEF 291
V V AAE WL + RH I + +D L + K+T AKE+W+ L ++ E
Sbjct: 63 GVPAVSAAEMAAWLEKDGEARHAIGMAVENDQLVHICRKKT--AKEMWDTLLGIHEVESM 120
Query: 292 GTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWK 351
T + ++K ++ ++ ++ E +L + + + A + V+VILS LP+S+
Sbjct: 121 NTMMTVMQKMCSLKLQEDGNLPEHLKKLTAMHNRLEVADEGLKPRQFVAVILSSLPMSYG 180
Query: 352 DF--CIKLMRMEYLTFTMLMDHIKAEEESRSHNK--QEEPSKFVELSPAVNFG----PRM 403
I+ E +T + ++ E R + Q PS L + G P+
Sbjct: 181 TLINVIEGYPREQITVDFVKSKLRDEWRRRQECQEFQSGPSDEKALKISAKSGSRAKPKA 240
Query: 404 REMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
E+ KK K+ VC+ C+++GH + C
Sbjct: 241 AELKKK--------KSGVCHFCQEEGHFIRDC 264
>gi|108711140|gb|ABF98935.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 593
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 28/197 (14%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAKQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESR 379
+ L+ + EE++R
Sbjct: 173 -SVEGLIASLDVEEKAR 188
>gi|449528782|ref|XP_004171382.1| PREDICTED: uncharacterized protein LOC101228884, partial [Cucumis
sativus]
Length = 202
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 25/171 (14%)
Query: 245 WLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEF 304
W + +C+++ILN L + LY YS SAK LW L+ Y E G K+ V K++++
Sbjct: 53 WKHAEYLCKNYILNGLDNTLYNVYS-SVDSAKNLWTSLEKKYKTEVAGAKKFIVGKFLDY 111
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D K+V Q E+ V+ I+ KLP SWKDF +K R E
Sbjct: 112 KMVDSKTVISQVQEI------------------QVASIIEKLPPSWKDFKNYLKHKRKE- 152
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES 413
+ L+ + EE +R K E+ + + P N + +KKR+ S
Sbjct: 153 IKLEELVVRLGIEENNR---KAEKCTMDSTMDPKANIVENRPQSNKKRKFS 200
>gi|225438387|ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI
[Vitis vinifera]
gi|147846591|emb|CAN79502.1| hypothetical protein VITISV_022689 [Vitis vinifera]
gi|296082597|emb|CBI21602.3| unnamed protein product [Vitis vinifera]
Length = 103
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 89 DDGDSII-CKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKS 147
DD D+II C++S R V+++ ++G+ V IRE++ +DGK +P KGI+LT +QW
Sbjct: 32 DDPDNIIVCEISRNRRVSVRNWQGKVQVDIREFYVKDGKQMPGKKGISLTMDQWNVLRDH 91
Query: 148 LPAIDEAVV 156
+ IDEAV
Sbjct: 92 VNEIDEAVA 100
>gi|259490442|ref|NP_001159025.1| RNA polymerase II transcriptional coactivator KIWI [Zea mays]
gi|195640074|gb|ACG39505.1| RNA polymerase II transcriptional coactivator KIWI [Zea mays]
Length = 103
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 49/74 (66%), Gaps = 7/74 (9%)
Query: 89 DDGDS-------IICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQW 141
DDG S ++ ++S + V+++ +KGR FV +RE++ +DGK +PT KGI+L +QW
Sbjct: 26 DDGPSESAEDGTVVAEISKNKKVSVRSWKGRVFVDLREFYFKDGKTLPTRKGISLQLDQW 85
Query: 142 RAFSKSLPAIDEAV 155
+ ++ AI+EA+
Sbjct: 86 KILKDNIKAINEAI 99
>gi|195610466|gb|ACG27063.1| RNA polymerase II transcriptional coactivator KIWI [Zea mays]
gi|413937234|gb|AFW71785.1| RNA polymerase II transcriptional coactivator KIWI [Zea mays]
Length = 103
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 49/74 (66%), Gaps = 7/74 (9%)
Query: 89 DDGDS-------IICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQW 141
DDG S ++ ++S + V+++ +KGR FV +RE++ +DGK +PT KGI+L +QW
Sbjct: 26 DDGPSESAEDGTVVAEISKNKKVSVRSWKGRVFVDLREFYFKDGKTLPTRKGISLQLDQW 85
Query: 142 RAFSKSLPAIDEAV 155
+ ++ AI+EA+
Sbjct: 86 KILKDNIKAINEAI 99
>gi|18997231|gb|AAL83348.1|AC074282_15 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31429942|gb|AAP51926.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 1109
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 113/273 (41%), Gaps = 32/273 (11%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV E E K+ +
Sbjct: 115 HAFDGSNYKRWKARALLWLTAMQCFYV-----------SWGKRSEPPLSPGEEAKFEASD 163
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 164 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGFSDAGSELYVMEQFYDYKMVDD 222
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTML 368
SV EQA + +A + + + F I++KLP +W DF L + + + + L
Sbjct: 223 CSVVEQAHGIQMLAKELENNNCELPDKFVAGGIIAKLPPAWSDFATSLKHKRQEFSVSDL 282
Query: 369 MDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------- 421
+ + EE++R+ + + K VE + N + + +
Sbjct: 283 IGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKK 339
Query: 422 ---------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 340 KGKGKAKGDCFVCGKSGHWAKDCPERKNRKSAN 372
>gi|53980940|gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1391
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 117/271 (43%), Gaps = 48/271 (17%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 104 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTL----------- 152
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 153 -----FVGCVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 201
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 202 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 261
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 262 -SVEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQ 317
Query: 421 ------------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 318 KKNNNNPNQDERTCFVCGQVGHLARKCPQRK 348
>gi|345564855|gb|EGX47814.1| hypothetical protein AOL_s00083g26 [Arthrobotrys oligospora ATCC
24927]
Length = 241
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 80 RAQIGKRINDDGDSIICKLSNK-RTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTS 138
+A G R DD + +L K R V + EFKG VS+REY+ +DGK P KGI+++
Sbjct: 50 KAPDGARHVDDEGNFYWELGGKSRRVTVSEFKGNVLVSVREYYEKDGKYFPGKKGISMSL 109
Query: 139 EQWRAFSKSLPAIDEAVVKMQS 160
+Q+ K LPA++EA+ + S
Sbjct: 110 DQFNQLIKVLPALEEAIGQKSS 131
>gi|310793568|gb|EFQ29029.1| transcriptional Coactivator p15 [Glomerella graminicola M1.001]
Length = 157
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVK 157
LSNKR V + +FK F++IRE++ +DG ++P KGI+L Q+ A K++PAI E +
Sbjct: 53 LSNKRRVGVSQFKNNTFINIREFYEKDGDMLPGKKGISLNIAQYEALVKAIPAISEKLRA 112
Query: 158 M 158
M
Sbjct: 113 M 113
>gi|340503881|gb|EGR30390.1| RNA polymerase ii transcriptional coactivator, putative
[Ichthyophthirius multifiliis]
Length = 100
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 64 ESTDNRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRR 123
E TD ++ + E + +I + DG S+ L +K+ V+I++FKG+ ++ +RE++ +
Sbjct: 8 EKTDQSLQKQKKTE--KPEIKPKKQSDG-SLYFDLDDKKRVSIRKFKGKLYIDVREFYEK 64
Query: 124 DGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
DG ++P KGIALT W + ID+A+V++
Sbjct: 65 DGDMLPGKKGIALTLSNWEQLKGIINNIDDAIVEL 99
>gi|28876012|gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711758|gb|ABF99553.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1224
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 28/197 (14%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPKGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESR 379
+ L+ + EE++R
Sbjct: 173 -SVEGLIASLDVEEKAR 188
>gi|322710064|gb|EFZ01639.1| Transcriptional Coactivator p15 family protein [Metarhizium
anisopliae ARSEF 23]
Length = 147
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSL 148
DD + +LSNKR V + +FK +++REY+ +DGK++P KGI+L+ Q+ A K+
Sbjct: 37 DDEGNPFWELSNKRRVGVSQFKNVCLINVREYYEKDGKMLPGKKGISLSVAQYTALLKAA 96
Query: 149 PAIDEAVVKM 158
P I+ A+ +M
Sbjct: 97 PGINAALRQM 106
>gi|377655443|gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 34/268 (12%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKW-- 245
E+ +FNG N+ +W +++ +L++ C A E + + KW
Sbjct: 6 EIEKFNGNNFSLWKMKMKAVLRK--------------NNCLAAIGERPMEI--TDDKWNE 49
Query: 246 LNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQ 305
++ N I H+ L+D + +++ ++AKE+W+ L +Y + K +K +
Sbjct: 50 VDSNAISDLHLA--LADGVLSSVAEK-NTAKEIWDTLTKLYEAKSLHNKIFLKRKLYTLR 106
Query: 306 MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTF 365
M + V + L + + G I EN ++L LP S+ I L +
Sbjct: 107 MAESTMVTDHINTLKTLFSQLTTLGHNIEENERAELLLQSLPDSYDQLIINLTNNNPVD- 165
Query: 366 TMLMDHIKAE---EESRSHNK-------QEEPSKFVELSPAVNFGPRMREMSKKRRESEM 415
+++ D + A EESR NK Q+ + V + GP + R
Sbjct: 166 SLVFDDVAASVLNEESRRKNKENRQASSQQAEALSVTRGRSTERGPSGSQ--NHGRSKSR 223
Query: 416 DSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
K V CYNC KKGHV K C + + +E
Sbjct: 224 SKKNVKCYNCGKKGHVKKECWSNQKRRE 251
>gi|147815761|emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]
Length = 839
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 264 LYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIA 323
+Y YS + + KELWE L+ Y E G K+ V ++++++M D K+V + EL I
Sbjct: 1 MYNVYS-QVKTTKELWEFLEKKYKTENAGMKKFIVGRFLDYKMVDSKTVTSEVQELQIIL 59
Query: 324 DSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
+ A M + E+F V+ I+ KLP SWKDF
Sbjct: 60 HELHAEKMELSESFQVTTIVEKLPPSWKDF 89
>gi|222623045|gb|EEE57177.1| hypothetical protein OsJ_07114 [Oryza sativa Japonica Group]
Length = 427
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 90 DGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLP 149
D D ++ ++S R VA++ + G+ V IRE++ +DGK +P KGI L +QW+ ++
Sbjct: 358 DDDIVVAQISKNRRVAVRTWNGKVVVDIREFYEKDGKTLPGRKGIQLPMDQWKILRDNIK 417
Query: 150 AIDEAV 155
AIDEA+
Sbjct: 418 AIDEAI 423
>gi|357455925|ref|XP_003598243.1| hypothetical protein MTR_3g008890 [Medicago truncatula]
gi|355487291|gb|AES68494.1| hypothetical protein MTR_3g008890 [Medicago truncatula]
Length = 148
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 272 TSSAKELWEELKLV-YLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAG 330
T+++ + EE +V + + G+K+ V +Y+ ++M DEKS+ EQ+ E+ KIA + G
Sbjct: 3 TNTSDPIEEEKHVVEHAGKRHGSKKFVVSRYLNYKMTDEKSLEEQSHEIQKIAHEVYVEG 62
Query: 331 MMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEE 386
M + E F + V + KLP + KDF L + + + L+ ++ EEE+R + +EE
Sbjct: 63 MKLPEQFQIDVFIDKLPPAMKDFKNTLRHKTKEFSLESLITRLRIEEEARKQDLKEE 119
>gi|377655441|gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 112/267 (41%), Gaps = 32/267 (11%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKW-- 245
E+ +FNG N+ +W +++ +L++ C A E + + KW
Sbjct: 6 EIEKFNGNNFSLWKMKMKAVLRK--------------NNCLAAIGERPMEI--TDDKWNE 49
Query: 246 LNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQ 305
++ N I H+ L+D + +++ ++AKE+W+ L +Y + K +K +
Sbjct: 50 VDGNAISDLHLA--LADGVLSSVAEK-NTAKEIWDTLTKLYEAKSLHNKIFLKRKLYTLR 106
Query: 306 MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMR---MEY 362
M + V + L + + G I EN ++L LP S+ I L +E
Sbjct: 107 MAESTMVTDHINTLKTLFSQLTTLGHNIEENERAELLLQSLPDSYDQLIINLTNNNPVES 166
Query: 363 LTFTMLMDHIKAEE------ESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMD 416
L F + + EE E+R + Q+ + V + GP + + R
Sbjct: 167 LVFDDVAASVLNEESRRKNKENRQASSQQAEALSVTRGRSTERGPSGSQ--NQGRSKFRG 224
Query: 417 SKTVVCYNCRKKGHVAKHCHNKRLHQE 443
K V CYNC KKGHV K C + + +E
Sbjct: 225 KKNVKCYNCGKKGHVKKECWSNQKRRE 251
>gi|108712175|gb|ABF99970.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 572
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 28/197 (14%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++ Q +E T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPMGVLNADQQKEFDEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDCLVEVYMYMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D SV EQA E+ +A I ++ + F I++KLP SW+DF +K R EY
Sbjct: 113 KMSDNHSVVEQAHEIQTMAKEIELLKCVLPDKFVAGCIIAKLPPSWRDFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESR 379
+F L+ + EE+++
Sbjct: 173 -SFEGLIASLDVEEKAQ 188
>gi|115446667|ref|NP_001047113.1| Os02g0553600 [Oryza sativa Japonica Group]
gi|50725768|dbj|BAD33299.1| transcriptional coactivator p15 (PC4) family protein-like [Oryza
sativa Japonica Group]
gi|113536644|dbj|BAF09027.1| Os02g0553600 [Oryza sativa Japonica Group]
gi|125539866|gb|EAY86261.1| hypothetical protein OsI_07632 [Oryza sativa Indica Group]
gi|215704132|dbj|BAG92972.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 101
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 90 DGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLP 149
D D ++ ++S R VA++ + G+ V IRE++ +DGK +P KGI L +QW+ ++
Sbjct: 32 DDDIVVAQISKNRRVAVRTWNGKVVVDIREFYEKDGKTLPGRKGIQLPMDQWKILRDNIK 91
Query: 150 AIDEAV 155
AIDEA+
Sbjct: 92 AIDEAI 97
>gi|218201760|gb|EEC84187.1| hypothetical protein OsI_30574 [Oryza sativa Indica Group]
Length = 317
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 35/207 (16%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EFQMFDEK 310
IL+ L D L Y T AKELW+ L + +FG + YI ++M D++
Sbjct: 23 ILSVLGDRLVKVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHHYKMVDKR 76
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTML 368
S+ EQA E+ +A + ++ + F I++KLP SW+ F +K R EY + L
Sbjct: 77 SIVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRGFGTALKHKRQEY-SVEGL 135
Query: 369 MDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESE-------------- 414
+ + +E++R +++ SK N +++ SK + +++
Sbjct: 136 IASLDVKEKAR---EKDAASKGDGGQSTANVVHKVQNKSKGKHKAQQTTNFKKRKNNNNN 192
Query: 415 --MDSKTVVCYNCRKKGHVAKHCHNKR 439
+D +T C+ C + GH+A+ C ++
Sbjct: 193 PNLDERT--CFVCGQPGHLARKCQQRK 217
>gi|242061940|ref|XP_002452259.1| hypothetical protein SORBIDRAFT_04g022580 [Sorghum bicolor]
gi|241932090|gb|EES05235.1| hypothetical protein SORBIDRAFT_04g022580 [Sorghum bicolor]
Length = 101
Score = 63.2 bits (152), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSL 148
+DG +++ ++S + V+++ +KGR FV +RE++ +DGK +PT KGI+L +QW+ ++
Sbjct: 32 EDG-TVVAEISKNKKVSVRNWKGRVFVDLREFYVKDGKSLPTRKGISLQLDQWKILRDNI 90
Query: 149 PAIDEAV 155
AIDEA+
Sbjct: 91 KAIDEAI 97
>gi|10140704|gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1408
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 120 HAFDGSNYKRWKTRALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 168
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++ + L+ + + G++ ++++ +++M D+
Sbjct: 169 CLFRGALISVLADNIVDVY-MHMPSGKDMRDALEAKFGVSDAGSELYVMEQFYDYKMVDD 227
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 228 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVPD 286
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 287 LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 343
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 344 KKSKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 377
>gi|29126344|gb|AAO66536.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 570
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 28/197 (14%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++ Q +E T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPMGVLNADQQKEFDEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDCLVEVYMYMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D SV EQA E+ +A I ++ + F I++KLP SW+DF +K R EY
Sbjct: 113 KMSDNHSVVEQAHEIQTMAKEIELLKCVLPDKFVAGCIIAKLPPSWRDFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESR 379
+F L+ + EE+++
Sbjct: 173 -SFEGLIASLDVEEKAQ 188
>gi|50554237|ref|XP_504527.1| YALI0E28897p [Yarrowia lipolytica]
gi|49650396|emb|CAG80130.1| YALI0E28897p [Yarrowia lipolytica CLIB122]
Length = 136
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 45/66 (68%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEA 154
+ +L N + V ++EFKGR + IR ++ +DGK +P +KGI+LT Q+ S+ + +I +A
Sbjct: 6 VFELGNDKRVTVREFKGRTLIDIRAFYEKDGKKLPGSKGISLTEAQFEELSEQVQSIQDA 65
Query: 155 VVKMQS 160
V+ M++
Sbjct: 66 VLAMKA 71
>gi|50838657|dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 30/259 (11%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLN 247
E+ +FNGKN+ +W +++ +L++ C A SE ++KW
Sbjct: 6 EIEKFNGKNFSLWKLKVKAILRKDN--------------CLAAISERPVDF-TDDKKWSE 50
Query: 248 DNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMF 307
N + ++D + ++ +A E+W+ L +Y + K +K +M
Sbjct: 51 MNEDAMADLYLSIADGVLSSIEEK-KTANEIWDHLNRLYEAKSLHNKIFLKRKLYTLRMS 109
Query: 308 DEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTM 367
+ SV E LN + + + I ++L LP S+ I L LT +
Sbjct: 110 ESTSVTEHLNTLNTLFSQLTSLSCKIEPQERAELLLQSLPDSYDQLIINLTN-NILTDYL 168
Query: 368 LMDHIKA---EEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSK------ 418
+ D + A EEESR NK++ + V L A MR S +R +S +
Sbjct: 169 VFDDVAAAVLEEESRRKNKED---RQVNLQQAEAL-TVMRGRSTERGQSSGRGRSKSSKK 224
Query: 419 TVVCYNCRKKGHVAKHCHN 437
+ CYNC KKGH+ K C N
Sbjct: 225 NLTCYNCGKKGHLKKDCWN 243
>gi|20502803|gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
Length = 1264
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 242 ERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKY 301
E+++ + N + +L+ L D L + + + K+LW+ L Y + G+ ++ +
Sbjct: 20 EKEYDHANTMFTGAVLSALVDRLV-DANMQYTDGKQLWDALTTKYGASDAGSDLYIMESF 78
Query: 302 IEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRM 360
+++M D +S+ EQA E+ IA + +++ + F I++KLP +W++F L +
Sbjct: 79 HDYKMVDNRSIVEQAHEIQCIAKELDHLKIVLPDRFVAGCIIAKLPSTWRNFATALKHKR 138
Query: 361 EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKT- 419
+ ++ L+ + EE++R+ ++ SK E + N + K + +S +KT
Sbjct: 139 QEISVENLIASLDVEEKARA---KDTGSKGGEGHSSANMVQKNHNKGKGKPKSNKPNKTT 195
Query: 420 ----------VVCYNCRKKGHVAKHCHNK 438
+ C+ C + GH AK C ++
Sbjct: 196 NFKKKKNKAELTCFACGEAGHFAKDCPDR 224
>gi|118363412|ref|XP_001014607.1| Putative RNA polymerase II transcriptional coactivator [Tetrahymena
thermophila]
gi|89296698|gb|EAR94686.1| Putative RNA polymerase II transcriptional coactivator [Tetrahymena
thermophila SB210]
Length = 84
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 78 EQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALT 137
E++ ++ DDG S+ +L +K+ V +++FKG+ +V IRE++ +DG+++P KGI+L
Sbjct: 5 EEKKEVKPIKGDDG-SLYFELDDKKRVTVRKFKGKLYVDIREFYEKDGEMLPGKKGISLN 63
Query: 138 SEQWRAFSKSLPAIDEAVVKM 158
+ W F + +ID+ + +
Sbjct: 64 LQNWEQFRSLIDSIDQCITDI 84
>gi|384251139|gb|EIE24617.1| PC4-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 342
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
LS+KR V I +FK V IRE + +DGK +P KGI+L +EQW++ K LPA++ A+
Sbjct: 284 LSSKRAVRINQFKSSIMVDIREMYEKDGKELPGKKGISLVAEQWQSLVKGLPALEAAL 341
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 103 TVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
V ++ FKG+ V IRE++ +DGK +P KGI+LT EQW A S A+ EA+
Sbjct: 52 AVTVRSFKGKPLVDIREFYEKDGKPMPGKKGISLTPEQWAAVKGSAAAVSEAL 104
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV-- 155
LS+ R I FKG FV+IREY+ ++G+++P +KGIAL+ EQ++ + + + A+
Sbjct: 216 LSSNRRADISNFKGSTFVNIREYYEKNGEMLPGSKGIALSPEQFQILNAAASDVTAALAS 275
Query: 156 --VKMQSKLRSESSGEQNKDVANSMTSPLELFPTELHRFNG-KNYRVWAQQIELLLKQL 211
V + L S+ + N+ ++ M E++ + G K + A+Q + L+K L
Sbjct: 276 KDVDFKIALSSKRAVRINQFKSSIMVDIREMYEKDGKELPGKKGISLVAEQWQSLVKGL 334
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 17/169 (10%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESF-- 58
M + I++ V +L+ +D+ + E +R + + G + +K+ I V SF
Sbjct: 1 MAGPSRAEIKKEVSVILETADLTTLCERNIRELLTGKFGDVVQTDAYKKMIAVTVRSFKG 60
Query: 59 --LLSTTE--STDNRIEPD-----------LEVEEQRAQIGKRINDDGDSIICKLSNKRT 103
L+ E D + P V+ A + + ++ + + LS +R
Sbjct: 61 KPLVDIREFYEKDGKPMPGKKGISLTPEQWAAVKGSAAAVSEALDAEEEDFTVDLSAQRN 120
Query: 104 VAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAID 152
+ ++ F V IRE++ +DG+ P KGI+L + QW A + ID
Sbjct: 121 LRVRLFGKNLCVDIREFYEKDGEDAPGKKGISLPAVQWEALVSATDDID 169
>gi|400596300|gb|EJP64076.1| transcriptional Coactivator p15 [Beauveria bassiana ARSEF 2860]
Length = 159
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVK 157
LS+KR V + +F ++IREY+ +DGKL+P KGI+L+ EQ+ K +P+I+E + K
Sbjct: 57 LSSKRRVGVSKFNNATMINIREYYEKDGKLLPAKKGISLSVEQYTTLIKVMPSINEQLRK 116
Query: 158 M 158
M
Sbjct: 117 M 117
>gi|220966835|gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPC-PIVTLCPQASSEEVTRVKAAERKW- 245
E+ +FNG+ + +W +I +L++ D C + P ++E KW
Sbjct: 6 EIEKFNGRKFSLWKLKIRAILRK--------DNCLDAIDGRPADITDE---------KWK 48
Query: 246 -LNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEF 304
++DN + H+ ++D + +++ +AKE+W+ L +Y + + ++
Sbjct: 49 EMDDNAVANLHLA--MADSVLSSIAEK-KTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTL 105
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLT 364
+M + SV + LN + + A+ I EN ++L LP S+ D I + +
Sbjct: 106 RMGESTSVTDHINTLNTLFSQLTASDFKIAENERAELLLQSLPDSY-DQLIINITNNNIA 164
Query: 365 FTMLMDHIKA---EEESRSHNKQE--EPSKFVEL-----SPAVNFGPRMRE---MSKKRR 411
T+ D + EEESR NK+E E SK E + GP + SK RR
Sbjct: 165 DTLHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRR 224
Query: 412 ESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEIN 445
++ + CY C KGHV K C N + + E N
Sbjct: 225 KN-----NIKCYGCGMKGHVKKECWNNKKNGEKN 253
>gi|77552810|gb|ABA95606.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 999
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L + +V + L P EE + +AA+
Sbjct: 38 HAFDGSNYKRWKARALLWLTAVHCFFVSRGKPSELPLSP----EEEAKFEAAD------- 86
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ + + + ++ ++++ +++M D
Sbjct: 87 CLFRGALISVLADNIVDVY-MHMPSRKDMWDAFEAKFGVSDASSELYVMEQFYDYKMVDG 145
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTML 368
+SV EQA E+ +A + + + F I++KLP SW DF L + + + T L
Sbjct: 146 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWTDFATSLKHKRQEFSVTDL 205
Query: 369 MDHIKAEEESRSHNKQ 384
+ + EE++R+ + +
Sbjct: 206 IGSLGVEEKARAKDNR 221
>gi|90398986|emb|CAJ86258.1| H0801D08.16 [Oryza sativa Indica Group]
Length = 1122
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 18/192 (9%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P I+T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGILTTDQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C IL+ L D Y T AKELW+ L + + ++++ +++M D
Sbjct: 64 --C---ILSVLGDRPVEVYMHMTD-AKELWDALNTKFGATDVSNDLYIMEQFHDYKMADN 117
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTM 367
+SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY +
Sbjct: 118 RSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY-SVEG 176
Query: 368 LMDHIKAEEESR 379
L+ + EE++R
Sbjct: 177 LIASLDVEEKAR 188
>gi|118792757|ref|XP_320484.2| AGAP012041-PA [Anopheles gambiae str. PEST]
gi|116117051|gb|EAA00534.2| AGAP012041-PA [Anopheles gambiae str. PEST]
Length = 105
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAI 151
D + +L R + + EFKG+ +V IREY+ +DG+ +P+ KGI+LT QW+ + AI
Sbjct: 39 DPNVFELDKNRKITVNEFKGKVYVGIREYYSKDGQDLPSKKGISLTVPQWKTLLEHADAI 98
Query: 152 DEAVVKM 158
+E + K
Sbjct: 99 NEQIKKF 105
>gi|116317928|emb|CAH65951.1| H0716A07.9 [Oryza sativa Indica Group]
Length = 1216
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 28/197 (14%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLIEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++K+P SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKVPPSWRSFGTALKHKRHEY 172
Query: 363 LTFTMLMDHIKAEEESR 379
+ L+ + EE++R
Sbjct: 173 -SVEGLIASLDVEEKAR 188
>gi|303286889|ref|XP_003062734.1| transcriptional coactivator p15 [Micromonas pusilla CCMP1545]
gi|226456251|gb|EEH53553.1| transcriptional coactivator p15 [Micromonas pusilla CCMP1545]
Length = 442
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAI 151
D IC LS ++ + + E++GR VS+REY+ +DGK +P KGI+L EQW S+ +
Sbjct: 298 DGQICALSRQKRLVVGEYRGRKNVSLREYYEKDGKWLPGKKGISLAPEQWSILRDSIQGV 357
Query: 152 DEAVVKM 158
+ V +
Sbjct: 358 NARVAAV 364
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 91 GDSIICKLS--NKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSL 148
GD + KL+ R V + F+ V +RE++ +DGK +P KGI++ +EQW K
Sbjct: 373 GDECVVKLNPNGSRRVTVGTFRNATMVGVREFYEKDGKWLPGMKGISMPTEQWEQVVKHA 432
Query: 149 PAIDEAV 155
+DEA+
Sbjct: 433 GKVDEAL 439
>gi|157119659|ref|XP_001653440.1| p31A, putative [Aedes aegypti]
gi|157119661|ref|XP_001653441.1| p31A, putative [Aedes aegypti]
gi|108875250|gb|EAT39475.1| AAEL008736-PA [Aedes aegypti]
gi|403182989|gb|EJY57774.1| AAEL008736-PB [Aedes aegypti]
Length = 103
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 64 ESTDNRIEPD--LEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF 121
+++D+ PD V++ + + G ND G+ L R V + EFK + +V++REY+
Sbjct: 8 DTSDSDSGPDDRTPVKKSKTESGSTTNDKGEEEWA-LDRNRKVTVSEFKNKIYVNVREYY 66
Query: 122 RRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
+DGK +P KGI+LT QW+ + I+E + K
Sbjct: 67 EKDGKTLPGKKGISLTVPQWKKLLEHADEINEKIKKF 103
>gi|359806581|ref|NP_001241012.1| uncharacterized protein LOC100820368 [Glycine max]
gi|255637253|gb|ACU18957.1| unknown [Glycine max]
Length = 105
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEA 154
IC++S R VA++ +KG V IRE++ +DGK +P KGI+LT +QW + ID+A
Sbjct: 41 ICEISKNRRVAVRNWKGSIMVDIREFYVKDGKQLPGRKGISLTMDQWNVLRNHVEEIDKA 100
Query: 155 V 155
V
Sbjct: 101 V 101
>gi|70663916|emb|CAE02930.3| OSJNBa0014K14.2 [Oryza sativa Japonica Group]
Length = 628
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 28/197 (14%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTIFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L + +FG + YI +
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHHY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESR 379
+ L+ EE++R
Sbjct: 173 -SVEGLIASPDVEEKAR 188
>gi|110289309|gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1479
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 34/274 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 191 HAFDGSNYKRWKTRALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 239
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++ + L+ + + G++ ++++ +++M D+
Sbjct: 240 CLFRGALISVLADNIVDVY-MHMPSGKDMRDALEAKFGVSDAGSELYVMEQFYDYKMVDD 298
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 299 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVPD 357
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 358 LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 414
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 415 KKSKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 448
>gi|383865868|ref|XP_003708394.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Megachile rotundata]
Length = 118
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 78 EQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIRE-YFRRDGKLVPTAKGIAL 136
E+ ++ KR + + L N R V +++FKG+ +V IRE YF +DG L P KGI L
Sbjct: 36 EKTSKKSKRESSENQDYTWDLGNNRQVTVRDFKGKIYVDIREMYFDKDGNLKPGKKGICL 95
Query: 137 TSEQWRAFSKSLPAIDEAV 155
+ QWR S + +D+AV
Sbjct: 96 SVAQWRKLSAVIEDVDKAV 114
>gi|52353525|gb|AAU44091.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1117
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 117/276 (42%), Gaps = 44/276 (15%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 76 HAFDGSNYKRWKARALLWLTGMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 124
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ EF T +++M D+
Sbjct: 125 CLFRGALISVLADNIVDMY-MHMLSGKDMWDALEA---SSEFLTP-----ALYDYKMVDD 175
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP W DF L R E+ + T
Sbjct: 176 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPFWSDFATSLKHKRQEF-SVTN 234
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K +E + N + + ++ V
Sbjct: 235 LIGSLGVEEKARAKDNR---GKNIEGGSSTNLVQKKNPHASHNNNNKKVKPDVKPKATTN 291
Query: 422 ------------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK+C +++ + N
Sbjct: 292 FKKKGKGKAKGDCFVCGKPGHWAKNCPDRKDKKSAN 327
>gi|357149498|ref|XP_003575132.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like
[Brachypodium distachyon]
Length = 109
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 49/72 (68%)
Query: 90 DGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLP 149
D +++ ++S + V+++ + G+ V +RE++ +DGK +PT KGI+L +QW+ ++
Sbjct: 38 DDSTVVAQISKNKRVSVKSWNGKVMVDLREFYVKDGKDLPTRKGISLPIDQWKILKDNIK 97
Query: 150 AIDEAVVKMQSK 161
AIDEAV + ++K
Sbjct: 98 AIDEAVKEKENK 109
>gi|77554242|gb|ABA97038.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 312
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 107/235 (45%), Gaps = 28/235 (11%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE + +A++ + R +++ L+D++ Y S K++W+ L+ +
Sbjct: 14 PPLSPEEEVKFEASD-------CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFG 65
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
+ G++ ++++ +++M D++SV EQA E+ +A + + + F I++KLP
Sbjct: 66 VSDAGSELYVMEQFYDYKMVDDRSVVEQAHEIQMLAKELENNNCELSDKFVSGGIIAKLP 125
Query: 348 LSWKDFCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPR 402
SW DF L + + + + L+ + EE++R+ + + K VE + N P
Sbjct: 126 PSWSDFATSLKHKRQEFSVSDLIGSLGVEEKARAKDNR---GKKVEGGSSANMVQKKNPH 182
Query: 403 MREMSKKRRESEMDSKTVV------------CYNCRKKGHVAKHCHNKRLHQEIN 445
+KK + T C+ C K GH AK C ++ + N
Sbjct: 183 ASHNNKKVKPDVKPKATTNFKKKGKGKAKGDCFVCGKSGHWAKDCPKRKDRKSAN 237
>gi|218186479|gb|EEC68906.1| hypothetical protein OsI_37574 [Oryza sativa Indica Group]
Length = 342
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 102/225 (45%), Gaps = 28/225 (12%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE + +A++ + R +++ L+D++ Y S K++W+ L+ +
Sbjct: 14 PPLSPEEEVKFEASD-------CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFG 65
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
+ G++ ++++ +++M D++SV EQA E+ +A + + + F I++KLP
Sbjct: 66 VSDAGSELYVMEQFYDYKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVTGGIIAKLP 125
Query: 348 LSWKDFCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPR 402
SW DF L + + + L+ + EE++R+ ++ K VE + N P
Sbjct: 126 PSWSDFATSLKHKRQEFSVIDLIGSLGVEEKARA---KDIWGKKVEGGSSANMVQKKNPH 182
Query: 403 MREMSKKRRESEMDSKTVV------------CYNCRKKGHVAKHC 435
+KK + T C+ C K GH AK C
Sbjct: 183 ASHNNKKVKHDVKPKATTNFKKKGKGKAKGDCFVCGKPGHWAKDC 227
>gi|77551155|gb|ABA93952.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1336
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 115/274 (41%), Gaps = 51/274 (18%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++ Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLIAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L + L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLGNRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV ++A E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVKRAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESRS-----------------HNKQEEPSKFVELSPAVNFGPRMRE 405
+ L+ + EE++R H Q + + NF ++
Sbjct: 173 -SVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNF----KK 227
Query: 406 MSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKR 439
K D +T C+ C + GH+A+ C ++
Sbjct: 228 QKKNNINPNQDERT--CFVCGQVGHLARKCPQRK 259
>gi|389610155|dbj|BAM18689.1| single stranded-binding protein c31A [Papilio xuthus]
Length = 105
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 78 EQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALT 137
E++A++G R D + + L K+ V ++ FKG+ +V +RE++ ++G L+P KGI+LT
Sbjct: 26 EKKAKMGSRTEDKEPTWV--LQGKKLVKVRTFKGKVYVDVREFYEKNGDLLPGKKGISLT 83
Query: 138 SEQWRAF 144
EQWR
Sbjct: 84 PEQWRKL 90
>gi|298708668|emb|CBJ26155.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 128
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 90 DGDSIICK--LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKS 147
DG + K L NK+ V ++EFKG+ +V IREY+ +DG++ P KGI+L++E W ++
Sbjct: 56 DGSGVSNKIELGNKKFVDVREFKGKIYVDIREYYEKDGEMRPGKKGISLSTEHWEVLKEN 115
Query: 148 LPAIDEAV 155
+ I+ V
Sbjct: 116 MDDINAKV 123
>gi|449457317|ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like
[Cucumis sativus]
gi|449527765|ref|XP_004170880.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like
[Cucumis sativus]
Length = 104
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 85 KRINDDGDSII-CKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRA 143
K+ +DD D I+ C+LS R V ++ ++G+ V IRE++ +DGK +P KGI+L+ +QW
Sbjct: 26 KKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNV 85
Query: 144 FSKSLPAIDEAV 155
+ ID+AV
Sbjct: 86 LLNHVEEIDKAV 97
>gi|405978408|gb|EKC42799.1| Activated RNA polymerase II transcriptional coactivator p15
[Crassostrea gigas]
Length = 124
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 91 GDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
G + +LS R + EF+GR V IREY+ G+L P KGI+LT EQW + + +
Sbjct: 56 GGEHMFQLSTMRFATVSEFRGRVMVGIREYYDAGGELKPGKKGISLTLEQWTSLKEQMDE 115
Query: 151 IDEAV 155
IDEA+
Sbjct: 116 IDEAI 120
>gi|145513068|ref|XP_001442445.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409798|emb|CAK75048.1| unnamed protein product [Paramecium tetraurelia]
Length = 115
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%)
Query: 97 KLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVV 156
KL++ + V++ +FKG +SIRE+F +DG+ +PT KGI L + W F + + IDE V
Sbjct: 52 KLTSFKKVSVSKFKGNVIISIREFFSKDGQSLPTKKGITLQLDNWEKFKQYIAEIDECVN 111
Query: 157 KMQ 159
K++
Sbjct: 112 KLK 114
>gi|22267593|gb|AAM94928.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 619
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 30/236 (12%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE + +A++ + R +++ L+D++ Y S K++W+ L+ +
Sbjct: 14 PPLSPEEEAKFEASD-------CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFG 65
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
+ G++ ++++ +++M D++SV EQA E+ +A + + + F I++KLP
Sbjct: 66 VSDAGSELYVMEQFYDYKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLP 125
Query: 348 LSWKDFCIKLM--RMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMRE 405
SW DF L R E+ + L+ + EE++R+ + Q K VE + N +
Sbjct: 126 PSWSDFATSLKHNRQEF-SVPDLIGSLGVEEKARAKDVQ---GKKVEGGSSANMVQKKNP 181
Query: 406 MSKKRRESEMDSKTVV----------------CYNCRKKGHVAKHCHNKRLHQEIN 445
+ + C+ C K GH AK C ++ + N
Sbjct: 182 HASHNNKKVKPDVKPKAATNFKKKSKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 237
>gi|108707134|gb|ABF94929.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1284
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 114/270 (42%), Gaps = 58/270 (21%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
+F G +++ W ++ L L +K C EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMK--------------CFWKQFEEATTLFVG--------- 48
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EFQ 305
C IL+ L D L Y T AKELW+ L + +FG + YI +++
Sbjct: 49 -C---ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDYK 98
Query: 306 MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYL 363
M D +SV EQA E+ +A + ++ + F V I++KLP SW+ F +K R EY
Sbjct: 99 MADNRSVVEQAHEIQTMAKELELLKCVLPDKFVVGCIIAKLPPSWRSFGTVLKHKRQEY- 157
Query: 364 TFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV--- 420
+ L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 158 SVEGLIAPLDVEEKAR---EKDAASKGDGGQSSANVMHKAQNKSKGKYKAQQTTNLKKQK 214
Query: 421 -----------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 215 KNNNNPNQDERTCFVCGQLGHLARKCPQRK 244
>gi|388504274|gb|AFK40203.1| unknown [Lotus japonicus]
Length = 106
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 88 NDDGDSII-CKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSK 146
++D DSI+ C++S R V+++ ++GR V I E++ +DGK +P KGI+LT +QW
Sbjct: 34 DEDPDSIVVCEISKNRRVSVRNWQGRIVVDILEFYVKDGKQMPGKKGISLTMDQWNVLRN 93
Query: 147 SLPAIDEAV 155
+ ID+AV
Sbjct: 94 HIEEIDKAV 102
>gi|443698153|gb|ELT98290.1| hypothetical protein CAPTEDRAFT_102830 [Capitella teleta]
Length = 80
Score = 61.2 bits (147), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 97 KLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVV 156
+++ R V I EFKG+ +V+IREY+ DG++ P KGIAL SEQW + + ID+A+
Sbjct: 19 QIAKNRYVTISEFKGKKYVNIREYYDADGEMKPGRKGIALNSEQWANLKEHIDDIDKALD 78
Query: 157 KM 158
K+
Sbjct: 79 KL 80
>gi|219121989|ref|XP_002181338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407324|gb|EEC47261.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 118
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 86 RINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFS 145
RIN++GDS +LS R V +++FKG V IREY+ + KL+P KGI+LT +Q+ F
Sbjct: 44 RINEEGDSFF-ELSKTRRVTVRQFKGTTLVDIREYYEKGDKLMPGKKGISLTLDQFNEFK 102
Query: 146 KSLPA--IDEAVVKMQ 159
+ + +D+A+ K++
Sbjct: 103 DVIQSGLVDKALKKLE 118
>gi|113205396|gb|ABI34377.1| Polyprotein, putative [Solanum demissum]
Length = 233
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 180 SPLELFPTEL--HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCP--QASSEEV 235
SP T L ++ G NY W + ++++L + +VL + CP L P Q+S E+
Sbjct: 2 SPFNPISTILDQNKLEGSNYVDWRRILDIVLTAEEYKFVLHEECP---LKPNEQSSDED- 57
Query: 236 TRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKR 295
K A +KW + + R +I+ +S+ L +Q+ + SA E E LK ++ D+ K+
Sbjct: 58 ---KLAYQKWRKADEMARCYIMASMSNVLQHQH-QAMLSAFEFLENLKQMFGDQGQSAKQ 113
Query: 296 SQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCI 355
++ + +M + V + L++ + + + G I + V +IL LP S++ FC+
Sbjct: 114 IAMRTLMNTKMVEGTPVRDHVLKMIGLLNELEVLGAEIDNDSQVEMILQSLPDSFQQFCL 173
Query: 356 KL-MRMEYLTFTMLMDHIKAEE 376
M L+ L++ ++A E
Sbjct: 174 NYNMNKMSLSLAQLLNELQAAE 195
>gi|307103764|gb|EFN52022.1| hypothetical protein CHLNCDRAFT_54789 [Chlorella variabilis]
Length = 404
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 9 IRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL-------- 60
++Q + +L++ D E T+ + + E LG++LS HK I+ +++FL
Sbjct: 7 VKQKLRRLLQSVDFETETQRSITKKLEEELGVNLS--QHKPMIKDEIDTFLTEQQDAEDD 64
Query: 61 --STTESTDNRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIR 118
E+ P + + GD ++ LS R +++ GRA V +R
Sbjct: 65 ADDDYEAEAAAAPPAKKKLKGAGGGAAPAPPQGD-LVVPLSATRFATVRQLGGRAMVDVR 123
Query: 119 EYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
E++ +DGKL P KG+AL + W A +S A+ AV
Sbjct: 124 EFYEKDGKLQPGRKGVALQAAAWTALVQSAAALSAAV 160
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 96 CKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQW 141
+LSNKR +I FKGR V+IREY+ +DG+ +P KGI+L EQW
Sbjct: 342 VQLSNKRKASISNFKGRFLVNIREYYEKDGQQLPGQKGISLPEEQW 387
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
LS+ R + +KG +V+IREY+ +DG+ +P KGI+L +Q+ + + +D A+
Sbjct: 276 LSSSRRADVSRYKGSLYVNIREYYEKDGQKLPGKKGISLPPDQFASLRQRAADLDAAL 333
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQW 141
L + I FKGR V +RE++ +DG+++P KGI+L+ E+W
Sbjct: 171 LGASKRATISAFKGRHSVDLREHYEKDGQMLPGKKGISLSEEEW 214
>gi|110289378|gb|ABB47865.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1126
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 30/236 (12%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE + +A++ + R +++ L+D++ Y S K++W+ L+ +
Sbjct: 14 PPLSPEEEAKFEASD-------CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFG 65
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
+ G++ ++++ +++M D++SV EQA E+ +A + + + F I++KLP
Sbjct: 66 VSDAGSELYVMEQFYDYKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLP 125
Query: 348 LSWKDFCIKLM--RMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMRE 405
SW DF L R E+ + L+ + EE++R+ + Q K VE + N +
Sbjct: 126 PSWSDFATSLKHNRQEF-SVPDLIGSLGVEEKARAKDVQ---GKKVEGGSSANMVQKKNP 181
Query: 406 MSKKRRESEMDSKTVV----------------CYNCRKKGHVAKHCHNKRLHQEIN 445
+ + C+ C K GH AK C ++ + N
Sbjct: 182 HASHNNKKVKPDVKPKAATNFKKKSKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 237
>gi|22324949|gb|AAM95676.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1138
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 30/236 (12%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE + +A++ + R +++ L+D++ Y S K++W+ L+ +
Sbjct: 14 PPLSPEEEAKFEASD-------CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFG 65
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
+ G++ ++++ +++M D++SV EQA E+ +A + + + F I++KLP
Sbjct: 66 VSDAGSELYVMEQFYDYKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLP 125
Query: 348 LSWKDFCIKLM--RMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMRE 405
SW DF L R E+ + L+ + EE++R+ + Q K VE + N +
Sbjct: 126 PSWSDFATSLKHNRQEF-SVPDLIGSLGVEEKARAKDVQ---GKKVEGGSSANMVQKKNP 181
Query: 406 MSKKRRESEMDSKTVV----------------CYNCRKKGHVAKHCHNKRLHQEIN 445
+ + C+ C K GH AK C ++ + N
Sbjct: 182 HASHNNKKVKPDVKPKAATNFKKKSKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 237
>gi|77554665|gb|ABA97461.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 220
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 28/197 (14%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++ Q +E T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPIGVLNADQQKEFDEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ LSD L Y T AKELW+ L + +FG + YI ++
Sbjct: 64 --C---ILSVLSDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEY 362
+M D +SV +QA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 113 KMADNRSVVKQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRGFGTALKHKRQEY 172
Query: 363 LTFTMLMDHIKAEEESR 379
+ L+ + EE++R
Sbjct: 173 -SVEGLIASLDVEEKAR 188
>gi|32489064|emb|CAE03994.1| OSJNBb0089B03.8 [Oryza sativa Japonica Group]
Length = 1113
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EFQMFDEK 310
IL+ L D L Y T AKELW+ L + +FG + YI +++M D +
Sbjct: 34 ILSGLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDYKMADNR 87
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTML 368
SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY + L
Sbjct: 88 SVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY-SVEGL 146
Query: 369 MDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-------- 420
+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 147 IASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNN 203
Query: 421 ------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 204 PNQDERTCFVCGQVGHLARKCPQRK 228
>gi|340712441|ref|XP_003394768.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Bombus terrestris]
Length = 115
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 10/106 (9%)
Query: 59 LLSTTESTDNRIEPDL---EVEEQRAQIGKRI-----NDDGDSIICKLSNKRTVAIQEFK 110
+ T +S+D ++P E+E+++ + K+I N D D++ L N R ++I++FK
Sbjct: 7 FVYTDDSSDEEMKPKRQKKEIEDKKGNVSKKIPERESNKDEDTV-WDLGNNRQISIRDFK 65
Query: 111 GRAFVSIRE-YFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
G+ +V IRE Y+ ++ L P KGI L+ QW + +D+AV
Sbjct: 66 GKLYVDIREMYYDKEANLKPGKKGICLSISQWHKLLSVVDDVDKAV 111
>gi|108862795|gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EFQMFDEK 310
IL+ L D L Y T AKELW+ L + +FG + YI +++M D +
Sbjct: 26 ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDYKMADNR 79
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTML 368
SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY + L
Sbjct: 80 SVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY-SVEGL 138
Query: 369 MDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-------- 420
+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 139 IASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNN 195
Query: 421 ------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 196 PNQDERTCFVCGQVGHLARKCPQRK 220
>gi|405117495|gb|AFR92270.1| hypothetical protein CNAG_00133 [Cryptococcus neoformans var.
grubii H99]
Length = 127
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 78 EQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFR--RDGKLVPTAKGIA 135
E A+I K NDDG+ KLS R + ++ FKG+ V IRE ++ G L P +KGI+
Sbjct: 46 ESGAEIEK--NDDGEEFF-KLSEYRRLTVRTFKGKTLVDIREIYKDKSSGALKPGSKGIS 102
Query: 136 LTSEQWRAFSKSLPAIDEAVVKMQ 159
LT+EQW ++ +DE V K+Q
Sbjct: 103 LTAEQWEVLKNNIQNVDEMVQKVQ 126
>gi|238578726|ref|XP_002388815.1| hypothetical protein MPER_12124 [Moniliophthora perniciosa FA553]
gi|215450444|gb|EEB89745.1| hypothetical protein MPER_12124 [Moniliophthora perniciosa FA553]
Length = 149
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKS 147
N +GDS + L K+ ++ FKG+ V IRE++ +G+ P KGI+LT EQW K
Sbjct: 78 NSEGDSYVD-LGKKKRATVRSFKGKPLVDIREFYGDEGQEKPGKKGISLTDEQWEMLKKR 136
Query: 148 LPAID 152
+P ID
Sbjct: 137 MPVID 141
>gi|108709158|gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1197
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EFQMFDEK 310
IL+ L D L Y T AKELW+ L + +FG + YI +++M D +
Sbjct: 36 ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDYKMADNR 89
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTML 368
SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY + L
Sbjct: 90 SVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY-SVEGL 148
Query: 369 MDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-------- 420
+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 149 IASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQHTTNFKKQKKNNNN 205
Query: 421 ------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 206 PNQDERTCFVCGQVGHLARKCPQRK 230
>gi|41393211|gb|AAS01934.1| putative Integrase core domain containing protein [Oryza sativa
Japonica Group]
Length = 1180
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EFQMFDEK 310
IL+ L D L Y T AKELW+ L + +FG + YI +++M D +
Sbjct: 25 ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDYKMADNR 78
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTML 368
SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY + L
Sbjct: 79 SVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY-SVEGL 137
Query: 369 MDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV-------- 420
+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 138 IASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQHTTNFKKQKKNNNN 194
Query: 421 ------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 195 PNQDERTCFVCGQVGHLARKCPQRK 219
>gi|37718821|gb|AAR01692.1| putative gag and pol polyprotein [Oryza sativa Japonica Group]
Length = 1427
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 111/237 (46%), Gaps = 32/237 (13%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE + +A++ + R +++ L+D++ Y + S K++W+ L+ +
Sbjct: 521 PPLSPEEEVKFEASD-------CLFRGALISVLADNIVDVY-MQMPSRKDMWDALEAKFG 572
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
+ G++ ++++ +++M D++S+ EQA E+ +A + + + F I++KL
Sbjct: 573 VSDAGSELYAMEQFYDYKMVDDRSIVEQAHEIQMLAKELENNNCELPDKFVADGIIAKLL 632
Query: 348 LSWKDFCIKL--MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GP 401
SW DF L R E+ + + L+ + EE++R+ + + K VE + N P
Sbjct: 633 PSWSDFATSLKHKRQEF-SVSDLIGSLGVEEKARAKDNR---GKKVEGGSSANMLQKKNP 688
Query: 402 RMREMSKKRRESEMDSKTVV-------------CYNCRKKGHVAKHCHNKRLHQEIN 445
+KK + +++ K C+ C K GH AK C ++ + N
Sbjct: 689 HASHNNKKVK-ADVKPKATTNFKKKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 744
>gi|51854274|gb|AAU10655.1| polyprotein [Oryza sativa Japonica Group]
Length = 1286
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 117/275 (42%), Gaps = 35/275 (12%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ +V + E E K+ +
Sbjct: 123 HAFDGSNYKKWKARALLWLTVMQCFFV-----------SRGKPSEPPLFPEEEAKFEATD 171
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D + Y S K++W+ L+ + + ++ ++++ +++M D+
Sbjct: 172 CLFRGALISVLADSIVDVY-MHMPSGKDMWDALEAKFGVSDVDSELYVMEQFYDYKMVDD 230
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
SV QA E +A + + + F I++KLP SW DF L R E+ + T
Sbjct: 231 CSVVGQAHENQMLAKELENNNCELPDKFVAGGIIAKLPPSWTDFATSLKHKRQEF-SVTD 289
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPRMREMSKKRRESEMDSKTVV-- 421
L+ + EE++R+ Q+ K +E + N P + K+ + ++ K
Sbjct: 290 LIGSLSVEEKARA---QDNRGKKIEGGSSANLVQKKNPHASHNNNKKVKPDVKPKATTNF 346
Query: 422 -----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 347 KKKGKGKAKGDCFVCGKPGHWAKDCPERKDKKSAN 381
>gi|9309363|dbj|BAB03249.1| polyprotein [Oryza sativa]
Length = 1268
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 108/239 (45%), Gaps = 36/239 (15%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE + +A++ + R +++ L+D++ Y S K++W+ L+ +
Sbjct: 14 PPLSPEEEAKFEASD-------CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFG 65
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
+ G++ ++++ +++M D++SV EQA E+ +A + + + F I++KLP
Sbjct: 66 VSDAGSELYVMEQFYDYKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLP 125
Query: 348 LSWKDFCIKL--MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMRE 405
SW DF L R E+ L+ + EE++R+ + + K VE + N +
Sbjct: 126 PSWSDFATSLKHKRQEFSVLD-LIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNP 181
Query: 406 MS-------------------KKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEIN 445
+ KK+ + + + C+ C K GH AK C ++ + N
Sbjct: 182 HASHNNKKVKPDVKPKAATNFKKKSKGKANGD---CFVCGKSGHWAKDCPERKDRKSAN 237
>gi|41469462|gb|AAS07263.1| putative gag/pol polyprotein [Oryza sativa Japonica Group]
gi|108710643|gb|ABF98438.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1318
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 97/198 (48%), Gaps = 19/198 (9%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+ F+G NY+ W + L L ++ YV L P+ E K+ +
Sbjct: 177 YAFDGSNYKKWKARALLWLTAMQCFYVSRGKRSEPPLSPEE-----------EAKFETLD 225
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y + K++W+ L+ + + G++ V+++ +++M D+
Sbjct: 226 CLFRGALISVLADNIVDVYMQ-----KDMWDALEAKFGVSDAGSELYVVEQFYDYKMVDD 280
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+S+ EQA E+ +A + + + F I++KLP SW DF L R E+ + +
Sbjct: 281 RSLVEQAHEIQMLAKELKNNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVSD 339
Query: 368 LMDHIKAEEESRSHNKQE 385
L+ + +E++R+ +E
Sbjct: 340 LIGSLGVQEKARAKRLRE 357
>gi|242079161|ref|XP_002444349.1| hypothetical protein SORBIDRAFT_07g020540 [Sorghum bicolor]
gi|241940699|gb|EES13844.1| hypothetical protein SORBIDRAFT_07g020540 [Sorghum bicolor]
Length = 235
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 196 NYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHH 255
Y W + + L L L VA+VL+D P A + +R AA +KW D+ +CR H
Sbjct: 13 GYLRWKESVLLRLHTLGVAHVLSDHPPAPVPP-PAGDDVASRATAAAKKWARDDAVCRGH 71
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK----- 310
IL LSD L Y+ R + + +W+ + Y D T +++I+F+ D+
Sbjct: 72 ILAALSDRLLPDYA-RHGTGRAVWQAVARTY-DLGVATPSVSWQRFIDFRFDDDGEGASL 129
Query: 311 SVFEQ 315
S+ EQ
Sbjct: 130 SLLEQ 134
>gi|212532551|ref|XP_002146432.1| RNA polymerase II transcriptional coactivator, putative
[Talaromyces marneffei ATCC 18224]
gi|210071796|gb|EEA25885.1| RNA polymerase II transcriptional coactivator, putative
[Talaromyces marneffei ATCC 18224]
Length = 158
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 85 KRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
++ + +GD + LS++R V I EF+G++ VSIREY+ +DG+ +P KGI+L +Q+ A
Sbjct: 45 QKTDSNGD-VYWDLSSQRRVTISEFRGKSLVSIREYYEKDGQSLPGKKGISLPIDQFNAL 103
Query: 145 SKSLPAIDEAV 155
LP I++ +
Sbjct: 104 ISLLPDIEQVL 114
>gi|125561581|gb|EAZ07029.1| hypothetical protein OsI_29277 [Oryza sativa Indica Group]
Length = 217
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 192 FNG-KNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
NG + Y W + + L L + VA+VL+D P P A EE AA R W D+
Sbjct: 13 LNGAEGYLRWKESMLLRLHTVGVAHVLSDDPP-----PPAGVEEEDGDAAARRMWARDDA 67
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
+CR HIL LSD ++ Y R +A++ W+ + Y + + + +Q Y + + D
Sbjct: 68 VCRGHILAALSDRIFPDYV-RHRTARDAWDAVARTYDNADAASAVTQRMLYDDLAL-DGA 125
Query: 311 SVFEQ 315
+ E+
Sbjct: 126 PLLER 130
>gi|116782200|gb|ABK22407.1| unknown [Picea sitchensis]
gi|224285214|gb|ACN40333.1| unknown [Picea sitchensis]
Length = 104
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 87 INDDGDSI-ICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFS 145
++DD +I IC++S R V+++ ++G+ FV IRE++ +DGK +P KGI+L+ +QW
Sbjct: 34 VSDDTSTIEICEISKTRKVSVRMWQGKIFVDIREFYIKDGKQLPGKKGISLSLDQWEVLR 93
Query: 146 KSLPAIDEAV 155
+ +D+ +
Sbjct: 94 NHIDEVDKEI 103
>gi|16905204|gb|AAL31074.1|AC091749_3 putative polyprotein [Oryza sativa Japonica Group]
gi|31431192|gb|AAP53007.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 259
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 35/262 (13%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ ++ L L +K +V T P I+T Q EE T +
Sbjct: 12 KFTGVHFKRRQIRVTLWLTAMKCFWVSTGKPEGILTADQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C IL L D L Y T AKELW+ L + + ++++ +++M D
Sbjct: 64 --C---ILGVLGDRLVEVYMHMTD-AKELWDALHTKFGATDASNDLYIMEQFHDYKMADN 117
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTM 367
SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY +
Sbjct: 118 HSVVEQAHEIQTMAKKLELLKCVLPDKFVDGCIIAKLPPSWRSFGTALKHKRQEY-SVEG 176
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV------- 420
L+ + EE++R ++ SK + N + + SK + +++ +
Sbjct: 177 LIASLDVEEKTR---EKYAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNN 233
Query: 421 -------VCYNCRKKGHVAKHC 435
C+ C + GH+A+ C
Sbjct: 234 NPNQDERTCFVCGQPGHLARKC 255
>gi|242775903|ref|XP_002478733.1| RNA polymerase II transcriptional coactivator, putative
[Talaromyces stipitatus ATCC 10500]
gi|218722352|gb|EED21770.1| RNA polymerase II transcriptional coactivator, putative
[Talaromyces stipitatus ATCC 10500]
Length = 157
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 90 DGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLP 149
+GD I +S+ R V I EF+G++ V+IREY+ +DG+ +P KGI+L EQ+ A LP
Sbjct: 50 NGD-IYWDISSHRRVTISEFRGKSMVNIREYYEKDGQELPGKKGISLPIEQFSALVSHLP 108
Query: 150 AIDEAV-VKMQSKLRSESSGEQN 171
I++ + K S R +GE N
Sbjct: 109 EIEQVLSAKGISVPRPSYNGESN 131
>gi|31126695|gb|AAP44618.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1494
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 111/237 (46%), Gaps = 32/237 (13%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE + +A++ + R +++ L+D++ Y + S K++W+ L+ +
Sbjct: 521 PPLSPEEEVKFEASD-------CLFRGALISVLADNIVDVY-MQMPSRKDMWDALEAKFG 572
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
+ G++ ++++ +++M D++S+ EQA E+ +A + + + F I++KL
Sbjct: 573 VSDAGSELYAMEQFYDYKMVDDRSIVEQAHEIQMLAKELENNNCELPDKFVADGIIAKLL 632
Query: 348 LSWKDFCIKL--MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GP 401
SW DF L R E+ + + L+ + EE++R+ + + K VE + N P
Sbjct: 633 PSWSDFATSLKHKRQEF-SVSDLIGSLGVEEKARAKDNR---GKKVEGGSSANMLQKKNP 688
Query: 402 RMREMSKKRRESEMDSKTVV-------------CYNCRKKGHVAKHCHNKRLHQEIN 445
+KK + +++ K C+ C K GH AK C ++ + N
Sbjct: 689 HASHNNKKVK-ADVKPKATTNFKKKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 744
>gi|261197087|ref|XP_002624946.1| RNA polymerase II transcriptional coactivator [Ajellomyces
dermatitidis SLH14081]
gi|239595576|gb|EEQ78157.1| RNA polymerase II transcriptional coactivator [Ajellomyces
dermatitidis SLH14081]
Length = 157
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 85 KRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
K+I+ +GD +S R + + FKGR VS+REY+ +DG+ +P KGI++ EQ+ A
Sbjct: 48 KKIDSNGD-FYWNISRFRRLTVSSFKGRTMVSVREYYEKDGQELPGKKGISMPLEQFNAM 106
Query: 145 SKSLPAIDEAVVK 157
+ LP I EAV+K
Sbjct: 107 VQLLPNI-EAVIK 118
>gi|326510383|dbj|BAJ87408.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 106
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSL 148
DDG ++ ++S + VA++ + G+ V +RE++ +DGK +PT KGI+L+ +QW ++
Sbjct: 37 DDG-IVVAQISKNKRVAVRSWNGKVMVDMREFYVKDGKSLPTRKGISLSMDQWEILRDNI 95
Query: 149 PAIDEAV 155
AIDEAV
Sbjct: 96 KAIDEAV 102
>gi|302773057|ref|XP_002969946.1| hypothetical protein SELMODRAFT_92844 [Selaginella moellendorffii]
gi|300162457|gb|EFJ29070.1| hypothetical protein SELMODRAFT_92844 [Selaginella moellendorffii]
Length = 86
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEA 154
+C++S R V++++++G+ V IREY+ + G+ +P KGI+LT +QW + + ID A
Sbjct: 22 VCEISKNRKVSVRKWRGQVLVDIREYWYKGGECLPGKKGISLTMDQWNVLQEHVKQIDSA 81
Query: 155 V 155
V
Sbjct: 82 V 82
>gi|242223869|ref|XP_002477490.1| predicted protein [Postia placenta Mad-698-R]
gi|220722870|gb|EED77311.1| predicted protein [Postia placenta Mad-698-R]
Length = 163
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 86 RINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFS 145
++ND+GD I L KR ++ FKG F+ IREY+ ++G P KG+ L EQW
Sbjct: 90 KVNDEGDKYID-LGKKRRATVRAFKGTVFLDIREYYGQEGDEKPGKKGVTLNQEQWEKLK 148
Query: 146 KSLPAID 152
+ AID
Sbjct: 149 EGQDAID 155
>gi|108708842|gb|ABF96637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1543
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 110/236 (46%), Gaps = 30/236 (12%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE + +A++ + R +++ L+D++ Y + S K++W+ L+ +
Sbjct: 544 PPLSPEEEVKFEASD-------CLFRGALISVLADNIVDVY-MQMPSRKDMWDALEAKFG 595
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
+ G++ ++++ +++M D++S+ EQA E+ +A + + + F I++KL
Sbjct: 596 VSDAGSELYAMEQFYDYKMVDDRSIVEQAHEIQMLAKELENNNCELPDKFVADGIIAKLL 655
Query: 348 LSWKDFCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPR 402
SW DF L + + + + L+ + EE++R+ + + K VE + N P
Sbjct: 656 PSWSDFATSLKHKRQEFSVSDLIGSLGVEEKARAKDNR---GKKVEGGSSANMLQKKNPH 712
Query: 403 MREMSKKRRESEMDSKTVV-------------CYNCRKKGHVAKHCHNKRLHQEIN 445
+KK + +++ K C+ C K GH AK C ++ + N
Sbjct: 713 ASHNNKKVK-ADVKPKATTNFKKKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 767
>gi|213404480|ref|XP_002173012.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212001059|gb|EEB06719.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 137
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 40/57 (70%)
Query: 99 SNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
S K+ V I +FKG+ +V IREY+ +DG+ P AKGIAL ++W+ F+ + +++A+
Sbjct: 31 STKKRVTISQFKGKDYVHIREYYEKDGEFRPGAKGIALNIDEWKQFTTYVNEVNKAL 87
>gi|226293691|gb|EEH49111.1| predicted protein [Paracoccidioides brasiliensis Pb18]
Length = 223
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 85 KRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
++++ +GD L+ R + + FKGR +S+REY+ +DG+ +P KGI+L EQ+ A
Sbjct: 105 RKVDSNGD-FYWSLARSRRLTVSSFKGRTMISVREYYEKDGQELPGKKGISLPLEQFNAL 163
Query: 145 SKSLPAIDEAVVK 157
+ LP + EAV+K
Sbjct: 164 VQLLPDV-EAVIK 175
>gi|134106209|ref|XP_778115.1| hypothetical protein CNBA1170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260818|gb|EAL23468.1| hypothetical protein CNBA1170 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 114
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFR--RDGKLVPTAKGIALTSEQWRAFS 145
NDDG+ KLS R + ++ FKG+ V IRE ++ G L P +KGI+LT+EQW
Sbjct: 41 NDDGEEFF-KLSEYRRLTVRTFKGKTLVDIREMYKDKSSGALKPGSKGISLTAEQWEILR 99
Query: 146 KSLPAIDEAVVKMQ 159
++ +DE V K+Q
Sbjct: 100 NNIQNVDEMVKKVQ 113
>gi|116317837|emb|CAH65871.1| OSIGBa0103I21.4 [Oryza sativa Indica Group]
Length = 964
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 106/237 (44%), Gaps = 30/237 (12%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE + +A+ D C +++ L+D++ Y S K +W+ L+ +
Sbjct: 14 PPLSPEEEAKFEAS------DCLFC-GALISVLADNIVDVY-MHMPSGKNMWDALEAKFG 65
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
+ G++ ++++ +++M D++SV EQA E+ +A + + + F I++KLP
Sbjct: 66 VSDAGSELYVMEQFYDYKMVDDRSVVEQAHEIQMLAKELENNNYELPDKFVAGGIIAKLP 125
Query: 348 LSWKDFCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPR 402
SW DF L + + + T L+ + EE++R+ + + K +E + N P
Sbjct: 126 HSWSDFATSLKHKRQEFSVTDLIGSLGVEEKARAKDNR---GKNIEGGSSANLVQKKNPH 182
Query: 403 MREMSKKRRESEMDSKTVV--------------CYNCRKKGHVAKHCHNKRLHQEIN 445
+ K++ C+ C K GH AK+C +++ + N
Sbjct: 183 ASHNNNKKKVKPDVKPKATTNFKKKGKGKAKGDCFVCGKPGHWAKNCPDRKDKKSAN 239
>gi|398396522|ref|XP_003851719.1| hypothetical protein MYCGRDRAFT_43207 [Zymoseptoria tritici IPO323]
gi|339471599|gb|EGP86695.1| hypothetical protein MYCGRDRAFT_43207 [Zymoseptoria tritici IPO323]
Length = 161
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 71 EPDLEVEEQRAQIGKRIN--------DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFR 122
+PD + Q+ + K+ + D + ++SNKR + + FK VSIRE++
Sbjct: 15 DPDSDTNNQQTKKSKKTSGFSTEMQTDADGNPFWEISNKRRLGVSTFKNNVMVSIREFYE 74
Query: 123 RDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVK 157
+DG+++P KG+ LT+EQ+ A + LP I E V+K
Sbjct: 75 KDGQMLPGKKGVTLTTEQFNAVIELLPQI-EPVLK 108
>gi|62734698|gb|AAX96807.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|77550001|gb|ABA92798.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1234
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 18/193 (9%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLND 248
++F G +++ W ++ L L +K +V T P I+ Q +E T +
Sbjct: 90 NKFTGVHFKRWQIRVTLWLPAMKCFWVSTSKPMGILNADQQKEFDEATTLFVG------- 142
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
C IL+ L D L Y T AKELW+ L + ++++ +++M D
Sbjct: 143 ---C---ILSMLGDRLVEVYMHMTD-AKELWDALNTKFDATNASNDLYIMEQFHDYKMAD 195
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFT 366
+SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY +
Sbjct: 196 NRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRGFGTALKHKRQEY-SVE 254
Query: 367 MLMDHIKAEEESR 379
L+ + EE+++
Sbjct: 255 GLIASLDVEEKAQ 267
>gi|18542177|gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
Length = 1292
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
F+GKN+ +W ++EL L + + A + E K+ ++N+
Sbjct: 29 FDGKNFLIWKAKMELWLTAMSCFHA-------------AEGKPANLPPEDEAKFKAEDNL 75
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKS 311
R +++ L Y + KELW+ L + + G++ +++ +++M + +S
Sbjct: 76 FRGAVISALDTKFQKSYII-LPTGKELWDALVGKFGVTDAGSELYLMEQLYDYKMVENRS 134
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTMLM 369
V EQA E +A + + + F I++KLP SWKDF L R E+ L+
Sbjct: 135 VVEQAHEFQALAKELELFPCPLPDKFVAGGIIAKLPPSWKDFATSLKHKRQEF-NVEELI 193
Query: 370 DHIKAEEESRSHNKQEEPSKFVELSPA 396
+ EE +R+ ++ K VE S A
Sbjct: 194 GTLDVEERART----KDSGKGVETSTA 216
>gi|391344790|ref|XP_003746678.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Metaseiulus occidentalis]
Length = 116
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 62 TTESTDNRIEPDLEVEEQRA-QIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREY 120
+ D+R P ++Q+ + GK ++ + +LS R V+++EFKGR V+IRE+
Sbjct: 16 SDSGPDDRNPPANAAKKQKTDEEGKPKKNEAGEYVFELSKMRNVSVKEFKGRVLVNIREF 75
Query: 121 F--RRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
+ + G+L P KGIAL+++QW + + ID A+
Sbjct: 76 YEDKNSGELRPGKKGIALSADQWNRLKEHMNDIDAAI 112
>gi|402550178|pdb|4AGH|A Chain A, Structural Features Of Ssdna Binding Protein Mosub1 From
Magnaporthe Oryzae
Length = 158
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAID 152
+S+KR V I +FK F++IREY+ G++ P KGI LT +Q+ AF K++PAI+
Sbjct: 51 ISDKRRVGISQFKKMDFINIREYYEAGGEMKPGKKGIGLTVDQYTAFLKAIPAIN 105
>gi|239606518|gb|EEQ83505.1| RNA polymerase II transcriptional coactivator [Ajellomyces
dermatitidis ER-3]
gi|327356300|gb|EGE85157.1| RNA polymerase II transcriptional coactivator [Ajellomyces
dermatitidis ATCC 18188]
Length = 157
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 85 KRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
K+I+ +GD +S R + + FKGR VS+REY+ +DG+ +P KGI++ EQ+ A
Sbjct: 48 KKIDSNGD-FYWNISRFRRLTVSSFKGRTMVSVREYYEKDGQELPGKKGISMPLEQFNAM 106
Query: 145 SKSLPAIDEAVVK 157
+ LP + EAV+K
Sbjct: 107 VQLLPNV-EAVIK 118
>gi|31415906|gb|AAP50927.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708705|gb|ABF96500.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1240
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 102/235 (43%), Gaps = 28/235 (11%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE + A++ + R +++ L+D++ Y S K++W+ L+ +
Sbjct: 14 PPLSPEEEAKFDASD-------CVFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFG 65
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
+ G++ ++++ +++M D++SV EQA E+ +A + + + F I++KLP
Sbjct: 66 VSDAGSELYVMEQFYDYKMVDDRSVVEQAYEIQMLAKELENNNCELPDKFVAGGIIAKLP 125
Query: 348 LSWKDFCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREM 406
SW DF L + + + L+ + EE++R+ + + K VE + N +
Sbjct: 126 PSWSDFATSLKHKRQEFSVPDLIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPH 182
Query: 407 SKKRRESEMDSKTVV----------------CYNCRKKGHVAKHCHNKRLHQEIN 445
+ + C+ C K GH AK C ++ + N
Sbjct: 183 ASHNNKKVKPDVKPKAATNFKKKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 237
>gi|389641159|ref|XP_003718212.1| hypothetical protein MGG_00780 [Magnaporthe oryzae 70-15]
gi|351640765|gb|EHA48628.1| hypothetical protein MGG_00780 [Magnaporthe oryzae 70-15]
gi|440479446|gb|ELQ60214.1| hypothetical protein OOW_P131scaffold01307g15 [Magnaporthe oryzae
P131]
Length = 162
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAID 152
+S+KR V I +FK F++IREY+ G++ P KGI LT +Q+ AF K++PAI+
Sbjct: 55 ISDKRRVGISQFKKMDFINIREYYEAGGEMKPGKKGIGLTVDQYTAFLKAIPAIN 109
>gi|38347504|emb|CAE02415.2| OSJNBa0095E20.2 [Oryza sativa Japonica Group]
Length = 842
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 22/184 (11%)
Query: 274 SAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMI 333
S K++W+ L+ + + G+K ++++ +++M D++SV EQA E+ +A + +
Sbjct: 52 SGKDMWDALEAKFEVSDAGSKLYVMEQFYDYKMVDDRSVVEQAHEIQMLAKELENNNCEL 111
Query: 334 YENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFV 391
+ F I++KLP SW DF L R E+ + T L+ + EE+S + + + +K +
Sbjct: 112 PDKFVAGGIIAKLPPSWTDFATSLKHKRQEF-SVTDLIGSLGVEEKSGAKDNR---AKKI 167
Query: 392 ELSPAVNFGPR----------------MREMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
+ + N + + + ++ C+ C K GH AKHC
Sbjct: 168 KGGSSANLVQKKNLHASHNNKKVKPNVKPKATTNFKKKGKGKTKGGCFVCGKSGHWAKHC 227
Query: 436 HNKR 439
++
Sbjct: 228 PERK 231
>gi|195114344|ref|XP_002001727.1| GI17008 [Drosophila mojavensis]
gi|193912302|gb|EDW11169.1| GI17008 [Drosophila mojavensis]
Length = 113
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 69 RIEPDLEVEEQRAQIGKRINDDGD---SIICKLSNKRTVAIQEFKGRAFVSIREYFRRDG 125
R P + ++ A + ND GD + L R V I EF+GR V IRE++ +DG
Sbjct: 22 RNPPPSKKSKEGADVKSNKNDSGDGSETTTWTLEGMRQVRINEFRGRKMVDIREHYEKDG 81
Query: 126 KLVPTAKGIALTSEQWRAF 144
K++P KGI+LT QW+
Sbjct: 82 KVLPGKKGISLTLSQWKKL 100
>gi|119193170|ref|XP_001247191.1| hypothetical protein CIMG_00962 [Coccidioides immitis RS]
gi|392863573|gb|EAS35671.2| RNA polymerase II transcriptional coactivator [Coccidioides immitis
RS]
Length = 165
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
+S +R V + FKGR +++REY+ +DG+ +P KGI++T EQ+ A LP I++ V
Sbjct: 55 ISRQRRVTVSTFKGRTMINVREYYEKDGQDLPGKKGISMTLEQFNALVSLLPGIEDVV 112
>gi|321454798|gb|EFX65953.1| hypothetical protein DAPPUDRAFT_65100 [Daphnia pulex]
Length = 64
Score = 58.9 bits (141), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
L N+R + +Q ++G+ F+ IREY+ +DGK +P KGI+L S QW + +DEA+
Sbjct: 4 LDNQRVLKVQSWRGKTFIDIREYYEKDGKQLPGKKGISLNSTQWNKLKSIISEVDEAL 61
>gi|303312299|ref|XP_003066161.1| Transcriptional Coactivator p15 family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240105823|gb|EER24016.1| Transcriptional Coactivator p15 family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320040164|gb|EFW22098.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 165
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
+S +R V + FKGR +++REY+ +DG+ +P KGI++T EQ+ A LP I++ V
Sbjct: 55 ISRQRRVTVSTFKGRTMINVREYYEKDGQDLPGKKGISMTLEQFNALVSLLPGIEDVV 112
>gi|449299659|gb|EMC95672.1| hypothetical protein BAUCODRAFT_498768 [Baudoinia compniacensis
UAMH 10762]
Length = 181
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 84 GKRINDDGDSI--ICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQW 141
G +I++DG+ + + N R V I FK V++RE++++D K +P KGI+L EQ+
Sbjct: 41 GTQIDEDGNEYWELSRGRNTRRVGISSFKDNTLVNLREFYQKDDKWLPGKKGISLPIEQF 100
Query: 142 RAFSKSLPAIDEAV 155
AF +LPAI+ A+
Sbjct: 101 EAFIGALPAIEAAL 114
>gi|222630420|gb|EEE62552.1| hypothetical protein OsJ_17351 [Oryza sativa Japonica Group]
Length = 251
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 273 SSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EFQMFDEKSVFEQALELNKIADSIV 327
+ AKELW+ L + +FG + + YI +++M D +SV EQA E+ +A +
Sbjct: 4 TDAKELWDAL-----NTKFGATDASIDVYIMEQFHDYRMADNRSVVEQAHEIQTMAKELE 58
Query: 328 AAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTMLMDHIKAEEESRSHNKQE 385
++ + F I++KLP SW+ F +K R EY + L+ + EE++R +++
Sbjct: 59 LLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY-SIEGLIASLDIEEKAR---EKD 114
Query: 386 EPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV--------------VCYNCRKKGHV 431
SK + N + SK + +++ + C+ C + GH+
Sbjct: 115 AASKGDGGQSSANVVHKAHNKSKGKYKAQQTTNFKKQKKNNNNPNQDEGTCFVCGQPGHL 174
Query: 432 AKHC 435
A+ C
Sbjct: 175 ARKC 178
>gi|242208829|ref|XP_002470264.1| predicted protein [Postia placenta Mad-698-R]
gi|220730714|gb|EED84567.1| predicted protein [Postia placenta Mad-698-R]
Length = 163
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 86 RINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFS 145
+ ND+GD I L KR ++ FKG F+ IREY+ ++G P KG+ L EQW
Sbjct: 90 KANDEGDKYID-LGKKRRATVRAFKGTVFLDIREYYGQEGDEKPGKKGVTLNQEQWEKLK 148
Query: 146 KSLPAID 152
+ AID
Sbjct: 149 EGQDAID 155
>gi|225678856|gb|EEH17140.1| predicted protein [Paracoccidioides brasiliensis Pb03]
Length = 161
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 85 KRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
++++ +GD L+ R + + FKGR +S+REY+ +DG+ +P KGI+L EQ+ A
Sbjct: 43 RKVDSNGD-FYWSLARSRRLTVSSFKGRTMISVREYYEKDGQELPGKKGISLPLEQFNAL 101
Query: 145 SKSLPAIDEAVVK 157
+ LP + EAV+K
Sbjct: 102 VQLLPDV-EAVIK 113
>gi|29027729|dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
Length = 1268
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 108/237 (45%), Gaps = 31/237 (13%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE + +A + + R +++ L+D++ Y S K++W+ L+ +
Sbjct: 14 PPLSPEEEAKFEATD-------CLFRGALISVLADNIVDVY-MHIPSGKDMWDALEAKFG 65
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
+ G++ ++++ +++M D++SV EQA E+ + + + + F I++KLP
Sbjct: 66 VSDAGSELYVMEQFYDYKMVDDRSVVEQAHEIQMLVKELENNHCELPDKFVAGGIIAKLP 125
Query: 348 LSWKDFCIKL--MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GP 401
SW DF L R E+ + T L+ + EE++R+ + + K +E + N P
Sbjct: 126 PSWSDFATSLKHKRQEF-SVTDLIGSLGIEEKARAKDNR---GKKIEGGSSANLVQKKNP 181
Query: 402 RMREMSKKRRESEMDSKTVV-------------CYNCRKKGHVAKHCHNKRLHQEIN 445
+ K+ + ++ K C+ C K GH AK C ++ + N
Sbjct: 182 HASHNNNKKVKPDVKPKATTNFKKKGKGKAKGDCFVCGKPGHWAKDCPERKDKKSAN 238
>gi|302680288|ref|XP_003029826.1| hypothetical protein SCHCODRAFT_111557 [Schizophyllum commune H4-8]
gi|300103516|gb|EFI94923.1| hypothetical protein SCHCODRAFT_111557, partial [Schizophyllum
commune H4-8]
Length = 174
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 87 INDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAF 144
+ DGD L K+ + EFKG+ +++IREY+ + G+ P KGIAL +EQW+ F
Sbjct: 101 LKQDGDMKYVDLGGKKRASASEFKGQRYINIREYYVDKASGEEKPGKKGIALNAEQWKVF 160
Query: 145 SKSLPAIDE 153
+++ +DE
Sbjct: 161 KQNIDTLDE 169
>gi|290979690|ref|XP_002672566.1| predicted protein [Naegleria gruberi]
gi|284086144|gb|EFC39822.1| predicted protein [Naegleria gruberi]
Length = 161
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 22/166 (13%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASER-LGIDLSDANHKRFIRGVVESFL 59
M V+E +R+ V +LK+ ++ K EA E+ LG+ LS + K ++ +++ +
Sbjct: 1 MSKVDEKILRKKVAAILKSQSDDDTVSLKTIREALEKDLGVSLS--SQKDVLKTIIKEEM 58
Query: 60 LSTT------------ESTDNRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQ 107
+DN EP + ++ +I K D+GD ++ ++K+ + +
Sbjct: 59 NKNQEEEEEESNKRKHNDSDNEDEPSEKKQKSSHKITKA--DNGDLVVF-FTDKKRITVN 115
Query: 108 EFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
EFK +V IREY+ PT KG+A++ ++W F + IDE
Sbjct: 116 EFKKSKYVHIREYYEDK----PTKKGVAMSRDEWTRFKTYIDTIDE 157
>gi|322791524|gb|EFZ15915.1| hypothetical protein SINV_08259 [Solenopsis invicta]
Length = 117
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 98 LSNKRTVAIQEFKGRAFVSIRE-YFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
L N R V ++ FKG+ +V IRE Y+ +DG L P KGI LT +QWR F + +D+
Sbjct: 55 LGNNRRVNVRNFKGKYYVDIREMYYDKDGDLKPGKKGICLTMQQWRKFMDVVEEVDKVA 113
>gi|307166387|gb|EFN60524.1| RNA polymerase II transcriptional coactivator [Camponotus
floridanus]
Length = 111
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 77 EEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIRE-YFRRDGKLVPTAKGIA 135
++Q + K+ + + I L + R V +++FKG+ +V IRE Y+ ++G L PT KGI
Sbjct: 28 DKQEDKPAKKAKKENEETIWDLGSNRQVNVRDFKGKYYVDIREMYYDKEGDLKPTKKGIC 87
Query: 136 LTSEQWRAFSKSLPAIDEAV 155
L+ +QWR F + +D+
Sbjct: 88 LSMQQWRKFMDIVEEVDKVA 107
>gi|392569662|gb|EIW62835.1| RNA polymerase II transcriptional coactivator [Trametes versicolor
FP-101664 SS1]
Length = 95
Score = 58.2 bits (139), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 75 EVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGI 134
+VEE + +N++G+ + L KR ++++KG F+ IRE++ D L P KG+
Sbjct: 11 KVEEDHGDVKVGVNEEGEKYV-DLGKKRRATVRQYKGSTFLDIREFYGDDNDLKPGKKGV 69
Query: 135 ALTSEQWRAFSKSLPAIDEAVVKM 158
++ EQW A + AID K+
Sbjct: 70 SINKEQWEALKRGSDAIDSFFAKI 93
>gi|195386510|ref|XP_002051947.1| GJ24334 [Drosophila virilis]
gi|194148404|gb|EDW64102.1| GJ24334 [Drosophila virilis]
Length = 111
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 89 DDGDSIICK--LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
DDGD + L R V I EF+G+ V IRE++ +DGK++P KGI+L++ QW+
Sbjct: 41 DDGDGGVSTWTLEGMRQVRINEFRGKKMVDIREHYEKDGKVLPGKKGISLSATQWKKL 98
>gi|38346883|emb|CAE03908.2| OSJNBb0015G09.2 [Oryza sativa Japonica Group]
Length = 1039
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 38/259 (14%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLN 247
L +F G +++ W ++ L L +K +V T P ++ Q E T +
Sbjct: 34 LDKFTGVHFKRWQIRVTLWLIAMKCFWVSTGKPMGVLNADQQKEFYEATTLFVG------ 87
Query: 248 DNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI----- 302
C IL+ L D L Y T AKELW+ L + +FG + YI
Sbjct: 88 ----C---ILSILGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFH 134
Query: 303 EFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRM 360
+++M + SV EQA E+ +A + ++ + F I++KLP SW+ F +K R
Sbjct: 135 DYKMANNHSVVEQAHEIQTMAKELELLKCVLPDKFVPGCIIAKLPPSWRGFGTALKHKRR 194
Query: 361 EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV 420
EY + L+ + EE++ K+ ++ K D +T
Sbjct: 195 EY-SIEGLIVSLDVEEKAW--------EKYAASKGDAQQTTNFKKQKKNNNNPNQDERT- 244
Query: 421 VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 245 -CFVCGQPGHLARKCPQRK 262
>gi|297811013|ref|XP_002873390.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319227|gb|EFH49649.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 107
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 42/67 (62%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAI 151
D ++C LS R V+++ + G+ ++ IRE++ +DGK +P KGI+L+ +QW I
Sbjct: 40 DIVVCNLSKNRRVSVRNWNGKIWIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAEDI 99
Query: 152 DEAVVKM 158
++A+ +
Sbjct: 100 EKALSDL 106
>gi|402085548|gb|EJT80446.1| hypothetical protein GGTG_00445 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 169
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 22/180 (12%)
Query: 22 MEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLSTTESTDNRIEPDLEVEEQRA 81
M ++ + RVE G D A+ + + + ES +P ++
Sbjct: 1 MPRFSKKRARVEEDASDGGDAGQAS--------APAKKVKSKESKQKEAKPKEAKSKEPT 52
Query: 82 QIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQW 141
+G ++++G+ ++S KR V I +F V+IREY+ + G+L P KGI+LT +Q+
Sbjct: 53 ALGSGVDNEGNPY-WEISAKRRVGIAKFNKMVLVNIREYYDQAGELKPGKKGISLTLDQY 111
Query: 142 RAFSKSLPAIDEAVVKMQSKLRSESSGEQNKDVANSMTSPLELFPTELHRFNGKNYRVWA 201
+A K+ P I+ + KM GE +DV S P P E R ++ R A
Sbjct: 112 QALLKNAPVINAELRKM---------GEDVQDVEASTADP----PAESPRPPSRDKRAKA 158
>gi|37718865|gb|AAR01736.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
gi|108709997|gb|ABF97792.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1177
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPC-PIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T I+T Q EE T +
Sbjct: 39 KFTGVHFKRWQIRVTLWLIAMKCFWVSTGKSKGILTADQQKQFEEATTLFVG-------- 90
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C IL+ L L Y T AKELW+ L + + ++++ +++M D
Sbjct: 91 --C---ILSVLGYRLVEVYMHMTD-AKELWDALNTKFGATDASNDLYIIEQFHDYKMADN 144
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTM 367
+SV +QA E+ +A + ++ F I++KLP SW+ F +K R EY +
Sbjct: 145 RSVVKQAHEIQTMAKELELLKCVLLNKFVAGCIIAKLPPSWRSFGTALKHKRQEY-SVEG 203
Query: 368 LMDHIKAEEESRSHNKQEEPSK 389
L+ EE++R +++ PSK
Sbjct: 204 LIASFDVEEKAR---EKDAPSK 222
>gi|321473544|gb|EFX84511.1| hypothetical protein DAPPUDRAFT_47108 [Daphnia pulex]
Length = 62
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
L +R + ++ ++G+ F+ IREY+ +DGK +P KGI+L S QW + +DEA+
Sbjct: 2 LDKQRVLKVRSWRGKTFIDIREYYEKDGKQLPGKKGISLNSSQWSKLKSIISEVDEAL 59
>gi|1167523|dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 114/267 (42%), Gaps = 37/267 (13%)
Query: 182 LELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLC-PQASSEEVTRVKA 240
+E +++ NG NY +W +++ LL +V P+ + P+ S+E
Sbjct: 1 MEARTSKMVNLNGTNYHLWRNKMKDLL------FVTKMHLPVFSSQKPEDKSDE------ 48
Query: 241 AERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKK 300
W ++N +I F+ D++Y S T A+ LW++L+ +Y + K + K
Sbjct: 49 ---DWEFEHNQVCGYIRQFVEDNVYNHISGVTH-ARSLWDKLEELYASKTGNNKLFYLTK 104
Query: 301 YIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--- 357
++ + + +V + E+ I D + G+ + ++L+ LP SW+ + +
Sbjct: 105 LMQVKYVEGTTVADHLNEIQGIVDQLSGMGIKFDDEVLALMVLATLPESWETLKVSITNS 164
Query: 358 -----MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRE 412
+ ME + +L + ++ + S ++ E AV R + S+ R+
Sbjct: 165 APNGVVNMETVKSGILNEEMRRRSQGTSSSQSE--------VLAVTTRGRSQNKSQSNRD 216
Query: 413 SEMDSKT----VVCYNCRKKGHVAKHC 435
V C+ C+KKGH+ + C
Sbjct: 217 KSRGKSNKFANVECHYCKKKGHIKRFC 243
>gi|312375405|gb|EFR22785.1| hypothetical protein AND_14204 [Anopheles darlingi]
Length = 584
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 72 PDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTA 131
P V++ + G +D D +L R + +++FKG+ +V IRE++ +DGK +P
Sbjct: 498 PRNPVKKAKPSEGGNKSDSTDDGCIQLDKNRKITVRDFKGKVYVDIREFYEKDGKQMPGK 557
Query: 132 KGIALTSEQWRAFSKSLPAIDE 153
KGI+L+ QW+ +S ++E
Sbjct: 558 KGISLSVPQWKKLLESADEVNE 579
>gi|195035187|ref|XP_001989059.1| GH11512 [Drosophila grimshawi]
gi|193905059|gb|EDW03926.1| GH11512 [Drosophila grimshawi]
Length = 119
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 88 NDDGDSIIC-KLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
D GD L R V I EF+GR V IRE++ +DGK++P KGI+L++ QWR
Sbjct: 49 GDGGDGTSSWTLEGMRQVRINEFRGRKMVDIREHYEKDGKVLPGKKGISLSASQWRKL 106
>gi|351722133|ref|NP_001238257.1| uncharacterized protein LOC100499936 [Glycine max]
gi|255627821|gb|ACU14255.1| unknown [Glycine max]
Length = 105
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEA 154
+C++ R VA++ +KG V IRE++ DGK +P KGI+LT +QW + ID+A
Sbjct: 41 VCEILKNRRVAVRNWKGSIMVDIREFYVEDGKQLPGRKGISLTMDQWNVLRNHVEEIDKA 100
Query: 155 V 155
+
Sbjct: 101 I 101
>gi|55416038|gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1268
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 104/236 (44%), Gaps = 30/236 (12%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE + +A++ + R +++ L+D++ Y S K++W+ L+ +
Sbjct: 14 PPLSPEEEAKFEASD-------CLFRGALISVLADNIVDVY-MHMPSRKDMWDALEAKFG 65
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
+ G++ ++++ +++M D++SV EQA E+ +A + + + F I++KLP
Sbjct: 66 VSDAGSELYVMEQFYDYKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLP 125
Query: 348 LSWKDFCIKL--MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMRE 405
SW DF L R E+ + L+ + EE++R+ + + K VE + N +
Sbjct: 126 PSWSDFATSLKHKRQEF-SVPDLIGSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNP 181
Query: 406 MSKKRRESEMDSKTVV----------------CYNCRKKGHVAKHCHNKRLHQEIN 445
+ + C+ C K GH AK C ++ + N
Sbjct: 182 HASHNNKKVKPDVKPKAATNFKKKSKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 237
>gi|350399755|ref|XP_003485628.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Bombus impatiens]
Length = 115
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 61/106 (57%), Gaps = 10/106 (9%)
Query: 59 LLSTTESTDNRIEPDL---EVEEQRAQIGKRI-----NDDGDSIICKLSNKRTVAIQEFK 110
+ T +S+D I+ E+E+++ ++ K++ N D D++ L N R ++I++FK
Sbjct: 7 FVYTDDSSDEEIKTKRQKKEIEDKKGKVSKKMPEKESNKDEDTV-WDLGNNRQISIRDFK 65
Query: 111 GRAFVSIRE-YFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
G+ +V IRE Y+ ++ L P KGI L+ QW+ + +D+AV
Sbjct: 66 GKLYVDIREMYYDKEANLKPGKKGICLSIGQWQKLLSVVDDVDKAV 111
>gi|406699363|gb|EKD02568.1| hypothetical protein A1Q2_03164 [Trichosporon asahii var. asahii
CBS 8904]
Length = 418
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFS 145
N +GD + LS R V +++FKG+ +V +R+++ + G++ PT KGI LT EQW A
Sbjct: 343 NAEGDEYVS-LSKTRRVTVRDFKGKTYVDLRDHYVDKNSGEMKPTGKGIMLTLEQWDALK 401
Query: 146 KSLPAID 152
++ A+D
Sbjct: 402 AAMGAVD 408
>gi|15242365|ref|NP_196487.1| RNA polymerase II transcriptional coactivator KIWI [Arabidopsis
thaliana]
gi|37079587|sp|O65154.1|KIWI_ARATH RecName: Full=RNA polymerase II transcriptional coactivator KIWI
gi|2997684|gb|AAC08574.1| putative transcriptional co-activator [Arabidopsis thaliana]
gi|9955512|emb|CAC05451.1| putative transcriptional co-activator (KIWI) [Arabidopsis thaliana]
gi|28466805|gb|AAO44011.1| At5g09250 [Arabidopsis thaliana]
gi|110736129|dbj|BAF00036.1| putative transcriptional co-activator [Arabidopsis thaliana]
gi|225898901|dbj|BAH30581.1| hypothetical protein [Arabidopsis thaliana]
gi|332003981|gb|AED91364.1| RNA polymerase II transcriptional coactivator KIWI [Arabidopsis
thaliana]
Length = 107
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAI 151
D ++C +S R V+++ + G+ ++ IRE++ +DGK +P KGI+L+ +QW I
Sbjct: 40 DIVVCNISKNRRVSVRNWNGKIWIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAEDI 99
Query: 152 DEAVVKM 158
++A+ +
Sbjct: 100 EKALSDL 106
>gi|327262629|ref|XP_003216126.1| PREDICTED: copia protein-like [Anolis carolinensis]
Length = 1366
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 35/252 (13%)
Query: 193 NGKNYRVWAQQIELLLK--QLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
NG+NY W +++E +LK QLK VL + P P+ + EE A + W D+
Sbjct: 17 NGENYLNWKRRLETMLKPAQLK---VLQEGGP-----PEGAGEE------AIQTWREDDR 62
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
+ R I+N LS+ + +Q+ + S+AKE+ + L+ Y K+ +M E
Sbjct: 63 LVRCIIINSLSERV-FQFVRDASNAKEMMDYLQTNYSKASEADIIFAYKRLFNSKMHSED 121
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-----MRMEYLTF 365
+ + ++ + D + ++G I E + ++ + S+K L + E LT
Sbjct: 122 DLNDYLQQIRSLVDQLRSSGEPITERMCIGLVACGIHPSYKSIITILRNTHRLESEQLTL 181
Query: 366 TMLMDHIKAE--EESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCY 423
+ +K+E E + S K S+ S A+ G + + +K V+C
Sbjct: 182 KSITAELKSEYLERNGSDPKNNMQSESQSKSMALKAGHKFKLKNK-----------VICN 230
Query: 424 NCRKKGHVAKHC 435
C+K GH+ + C
Sbjct: 231 LCQKAGHLQRDC 242
>gi|84961|pir||S00953 gag protein - fruit fly (Drosophila melanogaster) transposon 1731
gi|8701|emb|CAA30502.1| unnamed protein product [Drosophila melanogaster]
Length = 273
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 95/191 (49%), Gaps = 8/191 (4%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV--KKYIEFQMFDEKSVF 313
IL+ S L Y K +A E W+ L+ V+ + G R+ + KK + ++ + +S+
Sbjct: 62 ILSVKSSQL--GYVKGCLTAAEAWKVLQDVH--QPKGPLRTVMLYKKLLSKRLLEGQSIS 117
Query: 314 EQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTMLMDHI 372
E +I D++ A + I E V+LS LP S+++F + + R + F L +
Sbjct: 118 SHIKEFKEIFDALDAVEIGITEKLRSVVLLSSLPESFENFVVAIETRDDVPLFDALCIKL 177
Query: 373 KAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVA 432
EE++R +++ K E + A + + +++ R S K VVCYNC ++ H
Sbjct: 178 -IEEDTRRGGAEQQREKQTESAKAFTAVHKPQAPAREARPSAKKRKDVVCYNCGERRHFK 236
Query: 433 KHCHNKRLHQE 443
+C +++++E
Sbjct: 237 ANCRREKVNKE 247
>gi|156043231|ref|XP_001588172.1| predicted protein [Sclerotinia sclerotiorum 1980]
gi|154695006|gb|EDN94744.1| predicted protein [Sclerotinia sclerotiorum 1980 UF-70]
Length = 200
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 40/56 (71%)
Query: 102 RTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVK 157
R + + +FKG+ ++IRE++ +DG L+P KGI+LT +Q++ F +S+P I+ + K
Sbjct: 65 RKIELSDFKGQTLINIREFYEKDGNLLPGKKGISLTIDQYKNFLQSIPQINANLKK 120
>gi|401888004|gb|EJT51973.1| hypothetical protein A1Q1_06779 [Trichosporon asahii var. asahii
CBS 2479]
Length = 459
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFS 145
N +GD + LS R V +++FKG+ +V +R+++ + G++ PT KGI LT EQW A
Sbjct: 384 NAEGDEYVS-LSKTRRVTVRDFKGKTYVDLRDHYVDKNSGEMKPTGKGIMLTLEQWDALK 442
Query: 146 KSLPAID 152
++ A+D
Sbjct: 443 AAMGAVD 449
>gi|406860728|gb|EKD13785.1| transcriptional Coactivator p15 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 153
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 100 NKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
N R + + EFKG +SIREY+ ++G+ P +KG++L EQ++A KS+P ++ + M
Sbjct: 52 NPRRLNVSEFKGSKLISIREYYEKNGEYKPGSKGVSLNIEQYKALLKSIPELNAHLKTM 110
>gi|229366540|gb|ACQ58250.1| Activated RNA polymerase II transcriptional coactivator p15
[Anoplopoma fimbria]
Length = 125
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSK 146
N +G+ + ++ R V++++FKG+ + IREY+ +DG++ P KGI+L EQW
Sbjct: 54 NSNGEDNMFQIGKMRYVSVRDFKGKCLIDIREYWMNQDGEMKPGKKGISLNPEQWNQLKD 113
Query: 147 SLPAIDEAVVKM 158
+ ID+A+ ++
Sbjct: 114 QISEIDDAIKRI 125
>gi|108707890|gb|ABF95685.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1061
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 119/296 (40%), Gaps = 45/296 (15%)
Query: 174 VANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKV--AYVLTDPCPIVTLCPQAS 231
+ + +PL L PT + R A + E ++ ++ Y++T C I P
Sbjct: 69 LTTAAAAPLCLVPTATTAAPKREIRERAGEEEGKEREWRMVDGYLMTISCSIPLPIPLGK 128
Query: 232 SEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEF 291
E E K+ + + R +++ L+D++ Y S K++W+ L + +F
Sbjct: 129 RSEPPLSPKEEAKFEASDCLFRGALISVLTDNIVDVY-MHMPSGKDMWDAL-----EAKF 182
Query: 292 GTKRSQVKKYIEFQMFDEKSVFEQALELN--KIADSIVAAGMMIYENFHVSVILSKLPLS 349
G + + Y+ Q +D K + + E N ++ D VA G I++KLP S
Sbjct: 183 GVSDAVSELYVMEQFYDYKMMLAKEFENNNCELPDKFVAGG-----------IIAKLPPS 231
Query: 350 WKDFCIKLM--RMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPRM 403
W DF L R E+ + T L+ + EE++R + + K +E + N P
Sbjct: 232 WSDFATSLKHKRQEF-SVTDLIGSLGVEEKARVKDNR---GKNIEGGSSANLVQKKNPHA 287
Query: 404 REMSKKRRESEMDSKTVV--------------CYNCRKKGHVAKHCHNKRLHQEIN 445
+ ++ C+ C K GH AK+C +++ + N
Sbjct: 288 SHNNNNKKVKPDVKPKATTNFKKKGKGKAKGDCFVCGKPGHWAKNCPDRKDKKSAN 343
>gi|108706869|gb|ABF94664.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1286
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 50/274 (18%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 172 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 220
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ S + + EL Y+ E+F +++M D+
Sbjct: 221 CLFRGALISVLADNIVDVPSSESDAGSEL-------YVMEQF----------YDYKMVDD 263
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
+SV EQA E+ +A + + + F I++KLP SW DF L R E+ +
Sbjct: 264 RSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SVPD 322
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+ + + K VE + N + + +
Sbjct: 323 LIGSLGVEEKARAKDIR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 379
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 380 KKGKGKAKGDCFVCGKSGHWAKDCLERKDRKSAN 413
>gi|357453855|ref|XP_003597208.1| hypothetical protein MTR_2g093910 [Medicago truncatula]
gi|355486256|gb|AES67459.1| hypothetical protein MTR_2g093910 [Medicago truncatula]
Length = 202
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 286 YLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSK 345
Y +E G K+ V +Y+++QM D+KSV Q+ E+ IA IV GM++ E F ++VI+ K
Sbjct: 139 YDTKEVGAKKYVVNRYLKYQMTDDKSVEAQSHEIQNIAYKIVNEGMILDEQFQIAVIIDK 198
Query: 346 LP 347
LP
Sbjct: 199 LP 200
>gi|449460566|ref|XP_004148016.1| PREDICTED: uncharacterized protein LOC101220776 [Cucumis sativus]
Length = 312
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 10/210 (4%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV 238
+S ++L +E + NG NY W + +L + +VLT+ CP P +++ +R
Sbjct: 3 SSIVQLLASE--KLNGDNYAAWKSNLNTILVVDDLRFVLTEECP---QNPASNANRTSR- 56
Query: 239 KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
A +W+ N R +IL +SD L ++ + ++AKE+ + L+ ++ E+ + V
Sbjct: 57 -DAYDRWIKANEKARVYILASMSDVLAKKH-ESLATAKEIMDSLRGMFGQPEWSLRHEAV 114
Query: 299 KKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIK-- 356
K +M + SV E L++ + G I E VS IL LP S+ F
Sbjct: 115 KYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNAS 174
Query: 357 LMRMEYLTFTMLMDHIKAEEESRSHNKQEE 386
L ++E+ T+L + + + + KQ E
Sbjct: 175 LNKIEFNLTTLLNELQRFQNLTVGKGKQVE 204
>gi|307210856|gb|EFN87209.1| hypothetical protein EAI_12899 [Harpegnathos saltator]
Length = 114
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIRE-YFRRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + L N R V ++ FKG +V IRE Y+ +DG L P KGI L+ QWR F +
Sbjct: 46 DDTVWDLGNNRQVNVRNFKGNFYVDIREMYYDKDGDLKPGKKGICLSMSQWRKFMSVVEE 105
Query: 151 IDEA 154
+D+
Sbjct: 106 VDKV 109
>gi|298711481|emb|CBJ26569.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 102
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVV 156
LS R ++ FKGR V IR+YFR +G+ PT KGIALT QWR +++ ID+ +
Sbjct: 7 LSPVRQADVRLFKGRPLVDIRQYFRGAEGQAAPTKKGIALTIPQWRRLQEAMADIDKEIF 66
Query: 157 KMQSKLRS 164
++ + RS
Sbjct: 67 ALEEQQRS 74
>gi|115760344|ref|XP_001177085.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Strongylocentrotus purpuratus]
Length = 115
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRD-GKLVPTAKGIALTSEQWRAFSKSLPAIDEAVV 156
LS +R V ++EF+G+ + IREY+ ++ G L+P KGI+LT +QWR + ID +
Sbjct: 53 LSRQRFVNVREFRGKVLIDIREYYEKEVGDLLPGKKGISLTVDQWRKLVSQVDDIDSRIE 112
Query: 157 KM 158
+M
Sbjct: 113 EM 114
>gi|291226478|ref|XP_002733216.1| PREDICTED: RNA polymerase II transcriptional coactivator-like
[Saccoglossus kowalevskii]
Length = 116
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRD-GKLVPTAKGIALTSEQWRAFSK 146
+DD + L+ R V +++FKG+ + IREY+ + G+L P KGI+L EQW +
Sbjct: 44 SDDASDDMIALAKMRYVTVRDFKGKVLIDIREYYNDNSGELKPGRKGISLNKEQWDKLKE 103
Query: 147 SLPAIDEAV 155
S+ IDE +
Sbjct: 104 SIGEIDEKI 112
>gi|256086766|ref|XP_002579560.1| hypothetical protein [Schistosoma mansoni]
gi|353229573|emb|CCD75744.1| hypothetical protein Smp_084620 [Schistosoma mansoni]
Length = 117
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 91 GDSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSL 148
GD +I L+ K+ ++EF+G+AFV IREY+ + G+L P KGI+L EQW S+
Sbjct: 47 GDQLI-DLTGKKFACVREFRGKAFVDIREYYEEKSSGELKPGKKGISLNLEQWEYLKSSI 105
Query: 149 PAIDEAVVKMQ 159
+D+ + ++
Sbjct: 106 GELDDDIKNLR 116
>gi|157674639|gb|ABV60408.1| RNA polymerase II transcriptional coactivator [Artemia franciscana]
Length = 108
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRR-DGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVV 156
L KR + ++ FKG+ FV IREY+ G L+P KGI+L+ +QW+ +++ +DEA+
Sbjct: 47 LDKKRFLKVRSFKGKTFVDIREYYEDASGNLMPGKKGISLSVQQWKKVQEAMDEVDEALK 106
Query: 157 KM 158
M
Sbjct: 107 NM 108
>gi|387914738|gb|AFK10978.1| RNA polymerase II transcriptional coactivator [Callorhinchus milii]
Length = 123
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 90 DGDSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSL 148
D + + ++ R V+++EFK R + IREY+ +DG++ P KGI+L+ +QW + +
Sbjct: 54 DKEDNLFQIGKMRYVSVREFKSRVLIDIREYWMNQDGEMKPGKKGISLSPDQWNQLKEMI 113
Query: 149 PAIDEAV 155
P ID+A+
Sbjct: 114 PDIDDAI 120
>gi|255087903|ref|XP_002505874.1| transcriptional coactivator p15 [Micromonas sp. RCC299]
gi|226521145|gb|ACO67132.1| transcriptional coactivator p15 [Micromonas sp. RCC299]
Length = 411
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEA 154
IC LS R + +F+G+ +V +REY+ +DG +P KGI+L EQW + +++
Sbjct: 274 ICALSRARRCTVSDFRGKKYVGLREYYEKDGVWLPGKKGISLPYEQWSQLRSKIGEVNQR 333
Query: 155 VVKMQSK 161
+ +K
Sbjct: 334 IADFGAK 340
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 80 RAQIG---KRINDDG------DSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPT 130
R++IG +RI D G D+ +C L R V + F G + IRE++ +DG +P
Sbjct: 324 RSKIGEVNQRIADFGAKKPISDATVCVLGRDRRVTVDIFNGSVMIGIREFYEKDGAKLPG 383
Query: 131 AKGIALTSEQW 141
KGI+L+ +QW
Sbjct: 384 KKGISLSKDQW 394
>gi|221132768|ref|XP_002165392.1| PREDICTED: RNA polymerase II transcriptional coactivator SUB1-like
[Hydra magnipapillata]
Length = 115
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
LS +R V + EF+G+ +SIREY+ + G+ P KGI+LT EQW+ K + A++EA+
Sbjct: 55 LSKQRRVTVDEFRGKKLISIREYYTDKNSGEEKPGKKGISLTLEQWQELVKVVEAVNEAL 114
>gi|410922096|ref|XP_003974519.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Takifugu rubripes]
Length = 125
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +DG++ P KGI+L EQW +
Sbjct: 58 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMNQDGEMKPGKKGISLNPEQWNQLKDQIAD 117
Query: 151 IDEAVVKM 158
ID+A+ K+
Sbjct: 118 IDDAIKKI 125
>gi|412985480|emb|CCO18926.1| predicted protein [Bathycoccus prasinos]
Length = 392
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQW 141
D D +C+LSN + VA+Q ++G +S REY+++DG+ +P KG+ L +EQ+
Sbjct: 249 DAVDGEVCRLSNAKRVAVQVYRGAPTISFREYYQKDGQWLPGKKGVNLNAEQF 301
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAF 144
+C++ + V + +++G+ V +REY++ ++G+ P KG+A EQW F
Sbjct: 328 VCEIGGNKRVTVSKYQGKPMVHVREYYQNKNGEWAPGFKGLAFNREQWEMF 378
>gi|224093558|ref|XP_002309936.1| predicted protein [Populus trichocarpa]
gi|222852839|gb|EEE90386.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 94 IICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
++C++ R V ++ ++G+ V IRE++ +DG L+P KGI L+ +QW + ID+
Sbjct: 56 VVCEIGRNRRVTVRNWRGKINVDIREFYPKDGNLLPGKKGITLSLDQWNMLRDHVEEIDK 115
Query: 154 AV 155
A+
Sbjct: 116 AL 117
>gi|315054717|ref|XP_003176733.1| hypothetical protein MGYG_08902 [Arthroderma gypseum CBS 118893]
gi|311338579|gb|EFQ97781.1| hypothetical protein MGYG_08902 [Arthroderma gypseum CBS 118893]
Length = 177
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 86 RINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFS 145
+ + +GD ++S +R V I FKGR V++REY+ +DG+ +P KGI++T EQ+ +
Sbjct: 51 KTDSNGDPY-WEISRQRRVTISTFKGRVLVNVREYYEKDGQELPGKKGISMTLEQFNSLV 109
Query: 146 KSLPAIDEAVVKMQSKL 162
LP I V + K+
Sbjct: 110 TLLPEISAVVEQKGGKV 126
>gi|32492223|emb|CAE03674.1| OSJNBa0042N22.18 [Oryza sativa Japonica Group]
gi|38567758|emb|CAE76045.1| B1248C03.4 [Oryza sativa Japonica Group]
Length = 853
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 21/210 (10%)
Query: 253 RHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSV 312
R ++N L+D++ Y K++W+ L+ + + ++ ++++ +++M D++SV
Sbjct: 32 RGALINVLADNIVDMY-MHMPLGKDMWDALEAKFGVSDASSELYVMEQFFDYKMVDDRSV 90
Query: 313 FEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM-EYLTFTMLMDH 371
EQA E+ +A + + + F I++KLP SW DF L R + + + L+
Sbjct: 91 VEQAHEIQMLAKELENNNCELPDKFVARGIIAKLPPSWSDFATSLKRKRQEFSVSDLIGS 150
Query: 372 IKAEEESRSHNKQEEPSKFVELSPAVNF----GPRMREMSKKRRESEMDSKTVV------ 421
+ EE++R+ + + K VE + N P +KK + T
Sbjct: 151 LGVEEKARAKDNR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKATTNFKKKGK 207
Query: 422 ------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K G+ AK C ++ + N
Sbjct: 208 GKAKGDCFMCGKSGYWAKDCPERKDRKSAN 237
>gi|295660162|ref|XP_002790638.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281513|gb|EEH37079.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 158
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 85 KRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
++++ +GD L+ R + + +KG VS+REY+ +DG+ +P KGI+L EQ+ A
Sbjct: 40 RKVDSNGD-FYWSLARSRRLTVSSYKGHTMVSVREYYEKDGQELPGKKGISLPLEQFNAL 98
Query: 145 SKSLPAIDEAVVK 157
+ LP + EAV+K
Sbjct: 99 VQLLPDV-EAVIK 110
>gi|449471092|ref|XP_004153206.1| PREDICTED: uncharacterized protein LOC101203928, partial [Cucumis
sativus]
Length = 486
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
+ NG NY W + +L + +VLT+ CP AS++ T A +R W+ N
Sbjct: 13 KLNGDNYAAWKSNLNTILVVGDLRFVLTEECP----QNPASNDNRTSRDAYDR-WIKANE 67
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
R +IL +SD L ++ + ++AKE+ L+ ++ E + VK +M +
Sbjct: 68 KARVYILASMSDVLAKKH-ESLATAKEIMNSLRGMFGQPELSLRHEAVKYIYTKRMKEGT 126
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIK--LMRMEYLTFTML 368
SV E L++ + G I E VS IL LP S+ F L ++E+ T+L
Sbjct: 127 SVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLL 186
Query: 369 MDHIKAEEESRSHNKQEE 386
+ + + + KQ E
Sbjct: 187 NELQRFQNLTMGKGKQVE 204
>gi|358255846|dbj|GAA57477.1| activated RNA polymerase II transcriptional coactivator p15
[Clonorchis sinensis]
Length = 68
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSLPAID 152
+ L+ K+ V++++FKGR FV IRE++ + G++ P KGI+L EQW + ID
Sbjct: 1 MIDLTGKKFVSVRQFKGRTFVDIREFYEDKSTGEMKPGKKGISLNVEQWDYLKSVMSEID 60
Query: 153 EAVVKMQ 159
+V M
Sbjct: 61 RDIVNMH 67
>gi|19114954|ref|NP_594042.1| transcription coactivator PC4 [Schizosaccharomyces pombe 972h-]
gi|37088093|sp|P87294.1|TCP4_SCHPO RecName: Full=Putative RNA polymerase II transcriptional
coactivator
gi|2222784|emb|CAB10003.1| transcription coactivator PC4 [Schizosaccharomyces pombe]
Length = 136
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 101 KRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQS 160
K+ + + EF+G +V IREY+ +DG ++P KGIAL +W+ + + +D+++ + S
Sbjct: 37 KKRITLSEFRGTRYVHIREYYEKDGDMLPGKKGIALNINEWKKLKQLIHEVDDSLGLVDS 96
Query: 161 KLRSE 165
SE
Sbjct: 97 GSDSE 101
>gi|157278175|ref|NP_001098187.1| general transcriptional coactivator [Oryzias latipes]
gi|51465798|dbj|BAD36841.1| general transcriptional coactivator [Oryzias latipes]
Length = 125
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 102 RTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
R V++++FKG+ + IREY+ +DG++ P KGI+L EQW + IDEA+
Sbjct: 68 RYVSVRDFKGKVLIDIREYWMNQDGEMKPGKKGISLNPEQWNQLKDQMSEIDEAI 122
>gi|154316442|ref|XP_001557542.1| predicted protein [Botryotinia fuckeliana B05.10]
gi|347835246|emb|CCD49818.1| hypothetical protein [Botryotinia fuckeliana]
Length = 191
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 38/51 (74%)
Query: 102 RTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAID 152
R + + +FKG+ ++IRE++ +DG ++P KGI+LT +Q++ F +S+P I+
Sbjct: 67 RKIELSDFKGQTLINIREFYEKDGNVLPGKKGISLTVDQYKNFLRSIPQIN 117
>gi|121698023|ref|XP_001267689.1| RNA polymerase II transcriptional coactivator, putative
[Aspergillus clavatus NRRL 1]
gi|119395831|gb|EAW06263.1| RNA polymerase II transcriptional coactivator, putative
[Aspergillus clavatus NRRL 1]
Length = 172
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 86 RINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFS 145
R++ GD +LS R V + F+G+ F++IREY+ RDG+ +P KGI+L +Q+ +
Sbjct: 50 RLDASGDKF-WELSKMRRVTVSSFRGKTFINIREYYERDGQELPGKKGISLPIDQFSSLV 108
Query: 146 KSLPAIDEAV 155
LP I+ A+
Sbjct: 109 TLLPDIETAL 118
>gi|452840343|gb|EME42281.1| hypothetical protein DOTSEDRAFT_154955 [Dothistroma septosporum
NZE10]
Length = 179
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKS 147
+DDG ++S KR + + ++KG ++IREY+ +DGK +P KGI+L +Q++ F +
Sbjct: 45 DDDGQEY-WQISGKRRLVVSDYKGSTMINIREYYEKDGKTLP-GKGISLNIDQYKVFVEL 102
Query: 148 LPAIDEAV 155
LP I+ ++
Sbjct: 103 LPQIESSL 110
>gi|66506335|ref|XP_624593.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 isoform 1 [Apis mellifera]
Length = 119
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 58 FLLSTTESTDNRIEPD----LEVEEQRAQIGKRINDDGD------SIICKLSNKRTVAIQ 107
++ + +S+D ++P E+E++ ++ K++ + + + L N R ++++
Sbjct: 7 YVSTDDDSSDEGMKPKKKQKREIEDKEEKVSKKLKSESNKDESNKDTVWDLGNNRQISVR 66
Query: 108 EFKGRAFVSIRE-YFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
+FKG+ +V IRE Y+ ++ L P KGI L QW+ + +D+AV
Sbjct: 67 DFKGKLYVDIREMYYDKEANLKPGKKGICLNVTQWKKLLSVMDDVDKAV 115
>gi|449464830|ref|XP_004150132.1| PREDICTED: uncharacterized protein LOC101203109 [Cucumis sativus]
Length = 220
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 10/210 (4%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV 238
+S + L +E + NG NY W + +L + +VLT+ CP P +++ +R
Sbjct: 3 SSIVRLLASE--KLNGDNYAAWKSNLNPILVVGDLRFVLTEECP---QNPASNANRTSR- 56
Query: 239 KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
A +W+ N R +IL +SD L ++ + ++AKE+ + L+ ++ E+ + V
Sbjct: 57 -DAYDRWIKANEKARVYILASMSDVLAKKH-ESLATAKEIMDSLRGMFGQPEWSLRHEAV 114
Query: 299 KKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIK 356
K +M + SV E L++ + G I E VS IL LP S+ F
Sbjct: 115 KYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNAS 174
Query: 357 LMRMEYLTFTMLMDHIKAEEESRSHNKQEE 386
L ++E+ T+L + + + + KQ E
Sbjct: 175 LNKIEFNLTTLLNELQRFQNLTMGKGKQVE 204
>gi|258574395|ref|XP_002541379.1| predicted protein [Uncinocarpus reesii 1704]
gi|237901645|gb|EEP76046.1| predicted protein [Uncinocarpus reesii 1704]
Length = 167
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
+S +R V + FKGR +++REY+ + G+ +P KGI++T EQ+ A LP ++E V
Sbjct: 53 ISRQRRVTVSSFKGRTMINVREYYEKGGQDLPGKKGISMTLEQFNALVALLPNLEEVV 110
>gi|226372244|gb|ACO51747.1| Activated RNA polymerase II transcriptional coactivator p15 [Rana
catesbeiana]
gi|226372470|gb|ACO51860.1| Activated RNA polymerase II transcriptional coactivator p15 [Rana
catesbeiana]
Length = 129
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSK 146
ND D++ ++ R V++++FKG+ + IREYF + G+L P KGI+L EQW +
Sbjct: 59 NDPEDNMF-QIGKMRYVSVRDFKGKVLIDIREYFMDQQGELKPGRKGISLNPEQWSQLKE 117
Query: 147 SLPAIDEAVVKM 158
+ ID A+ K+
Sbjct: 118 QMSDIDNAIRKL 129
>gi|302847202|ref|XP_002955136.1| hypothetical protein VOLCADRAFT_121383 [Volvox carteri f.
nagariensis]
gi|300259664|gb|EFJ43890.1| hypothetical protein VOLCADRAFT_121383 [Volvox carteri f.
nagariensis]
Length = 381
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 97 KLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPAI 151
KLS R V++ EFKG +V +REY+ + G L P+AKG+ L QW A PAI
Sbjct: 315 KLSGMRRVSLSEFKGVTYVGVREYYDKGGGDLAPSAKGLNLNQAQWAACVAGAPAI 370
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 96 CKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
C+LS R AI EF+G ++ +REY+ +DG+L P+ KG+ L+ + A + P I AV
Sbjct: 172 CQLSRTRLAAISEFRGSCYLGLREYYEKDGQLHPSKKGVNLSLAEAEALLAAAPDISVAV 231
Query: 156 VKM 158
+
Sbjct: 232 GGL 234
>gi|327282542|ref|XP_003226001.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like isoform 1 [Anolis carolinensis]
gi|327282544|ref|XP_003226002.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like isoform 2 [Anolis carolinensis]
Length = 133
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ ++G++ P KGI+L EQW + +
Sbjct: 66 DENMFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWSQLKEQITD 125
Query: 151 IDEAVVKM 158
IDEAV K+
Sbjct: 126 IDEAVRKL 133
>gi|357464751|ref|XP_003602657.1| RNA polymerase II transcriptional coactivator KIWI [Medicago
truncatula]
gi|358348306|ref|XP_003638188.1| RNA polymerase II transcriptional coactivator KIWI [Medicago
truncatula]
gi|355491705|gb|AES72908.1| RNA polymerase II transcriptional coactivator KIWI [Medicago
truncatula]
gi|355504123|gb|AES85326.1| RNA polymerase II transcriptional coactivator KIWI [Medicago
truncatula]
Length = 107
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 85 KRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
K DD I+ ++ R V+++ + + +V IRE++ +DGK +P KGI+L EQW
Sbjct: 33 KDTEDDSGDIVFEIGKNRRVSVRTWNKQPWVDIREFYTKDGKQLPGKKGISLNMEQWIVL 92
Query: 145 SKSLPAIDEAV 155
+ ID AV
Sbjct: 93 RDHIEEIDNAV 103
>gi|225706930|gb|ACO09311.1| Activated RNA polymerase II transcriptional coactivator p15
[Osmerus mordax]
Length = 127
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 84 GKRINDDGDSI----ICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTS 138
G N GDS + ++ R V++++FKG+ + IREY+ +DG++ P KGI+L
Sbjct: 48 GGSANAKGDSNQEDNMFQIGKMRYVSVRDFKGKVLIDIREYWMNQDGEMKPGKKGISLNP 107
Query: 139 EQWRAFSKSLPAIDEAVVKM 158
EQW + ID+AV ++
Sbjct: 108 EQWSQLKDQISEIDDAVKRI 127
>gi|241156187|ref|XP_002407712.1| single-stranded DNA binding protein P9, putative [Ixodes
scapularis]
gi|215494203|gb|EEC03844.1| single-stranded DNA binding protein P9, putative [Ixodes
scapularis]
Length = 114
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 71 EPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVP 129
+PD E++ A + N DG+ L+ KR + ++EFKGR V IRE++ +G L P
Sbjct: 30 KPD---EKKTASASRDTNADGEERFM-LAKKRYLTVREFKGRVMVDIREFYEDNNGDLKP 85
Query: 130 TAKGIALTSEQWRAFSKSLPAIDEAVVK 157
KGI L +QW A + ID A+ K
Sbjct: 86 GKKGICLQLDQWNALKGHIDDIDAAIRK 113
>gi|326470685|gb|EGD94694.1| hypothetical protein TESG_02202 [Trichophyton tonsurans CBS 112818]
gi|326479602|gb|EGE03612.1| RNA polymerase II transcriptional coactivator [Trichophyton equinum
CBS 127.97]
Length = 177
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 97 KLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVV 156
++S +R V I FKGR V++REY+ +DG+ +P KGI++T EQ+ + LP I AV+
Sbjct: 60 EISRQRRVTISTFKGRVLVNVREYYEKDGQELPGKKGISMTLEQFNSLVTLLPEI-SAVI 118
Query: 157 KMQS 160
+ +
Sbjct: 119 EQKG 122
>gi|255545774|ref|XP_002513947.1| conserved hypothetical protein [Ricinus communis]
gi|223547033|gb|EEF48530.1| conserved hypothetical protein [Ricinus communis]
Length = 169
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 75/144 (52%), Gaps = 20/144 (13%)
Query: 185 FP--TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAE 242
FP +++ F+G+N++ W +++ +L VAY LTDP P T K
Sbjct: 37 FPDISKILVFDGENFKRWQERVFSILDMHGVAYALTDPKPAET------------TKKEF 84
Query: 243 RKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI 302
W+ N +CRH I++ L ++Y Y + A+++W+ + Y ++ G ++ + K+
Sbjct: 85 DLWVYANKVCRHTIISTL--YVYCAYKE----AQQIWDSMVNKYTAKDAGKQKFVIGKFY 138
Query: 303 EFQMFDEKSVFEQALELNKIADSI 326
+++M ++K + Q E +K+ + +
Sbjct: 139 KWEMMEDKDIKLQINEYHKLLEDL 162
>gi|429852185|gb|ELA27332.1| transcriptional coactivator p15 family protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 155
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 82 QIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQW 141
+G +++GD LS KR V + +F ++IRE++ +DG ++P KGI+L+ Q+
Sbjct: 35 DLGSGKDNNGDPY-WDLSGKRRVGVSQFNKATLINIREFYEKDGNMLPGKKGISLSIPQY 93
Query: 142 RAFSKSLPAIDEAVVKM 158
A K++PAI+ + M
Sbjct: 94 EALLKAVPAINAKLRAM 110
>gi|341881930|gb|EGT37865.1| hypothetical protein CAEBREN_21030 [Caenorhabditis brenneri]
gi|341881977|gb|EGT37912.1| hypothetical protein CAEBREN_14091 [Caenorhabditis brenneri]
Length = 123
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 65 STDNRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF--R 122
+ D++ EP + + ++ RI D + + ++ N R + FKG+ +V+IREY+ +
Sbjct: 34 TEDHKTEPK---KAKNEEVTGRIKDSDGNEMFEIGNMRYATVSNFKGKEYVNIREYYIDK 90
Query: 123 RDGKLVPTAKGIALTSEQWRAFSKSLPAID 152
K++P+ KGI+L QW +P ID
Sbjct: 91 NTSKMMPSKKGISLNKAQWLNLKDLIPEID 120
>gi|56407681|gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 108/264 (40%), Gaps = 32/264 (12%)
Query: 182 LELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAA 241
+E + + R NG+NY +W +++ LL K+ + + + E +V
Sbjct: 1 METNTSNMVRLNGRNYHIWKAKMKDLLFVKKLHLPVFASAKPENMSDEEWDFEHQQVCGY 60
Query: 242 ERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKY 301
R+W+ DN + +HI+N + A+ LW +L+ +Y + K +K+
Sbjct: 61 IRQWVEDNVL--NHIIN-------------ETHARSLWNKLETLYASKTGNNKLFLLKQM 105
Query: 302 IEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL---- 357
+ + + + + + + D + G+ + +L+ LP SW+ F + L
Sbjct: 106 MNIRYREGTLINDHVNDFQGVLDQLSGMGIKFEDEVLGLWLLNTLPDSWETFRVSLTNSA 165
Query: 358 ----MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSK---FVELSPAVNFGPRMREMSKKR 410
+ MEY+ +L EE+R ++ S+ V N R K R
Sbjct: 166 PNGVVTMEYVKSGIL------NEEARRRSQDTSTSQSDILVTDDRGRNKQKGQRGRDKSR 219
Query: 411 RESEMDSKTVVCYNCRKKGHVAKH 434
+S K + C+ C KK H+ K+
Sbjct: 220 SKSRSRYKDIECHYCGKKSHIKKY 243
>gi|358059066|dbj|GAA95005.1| hypothetical protein E5Q_01660 [Mixia osmundae IAM 14324]
Length = 185
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFS 145
N DG+ + LS R V ++ + G+ + IRE + +DGK++P KGI+L ++QW A S
Sbjct: 113 NTDGEGYVL-LSGSRRVTVRVYNGKPLIDIRETYEKDGKVLPGKKGISLNADQWAALS 169
>gi|308481187|ref|XP_003102799.1| hypothetical protein CRE_29961 [Caenorhabditis remanei]
gi|308260885|gb|EFP04838.1| hypothetical protein CRE_29961 [Caenorhabditis remanei]
Length = 118
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 76 VEEQRAQIGK------RINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKL 127
EEQ+ + K R+ D + + + N R + FKG+ +V+IREY+ + GK+
Sbjct: 31 TEEQKPKKAKAEEVTGRMKDSDGNEMFEFGNLRYATVSNFKGKEYVNIREYYVDKNSGKM 90
Query: 128 VPTAKGIALTSEQWRAFSKSLPAID 152
+P+ KGI+L QW +P ID
Sbjct: 91 MPSRKGISLNKAQWANLKDLIPEID 115
>gi|147773529|emb|CAN62870.1| hypothetical protein VITISV_015928 [Vitis vinifera]
Length = 764
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 111/265 (41%), Gaps = 24/265 (9%)
Query: 186 PTELHR-------FNGKNYRVWAQQIELLLKQLKVAYVL-TDPCPIVTLCPQASSEEVTR 237
P LH NG N+ W++Q++ L L + L T+ P +T ++S+EE
Sbjct: 12 PVSLHSHASSXPILNGTNFSDWSEQVQFHLGVLDLDLALRTEKPPAIT--EESSAEE--- 66
Query: 238 VKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQ 297
K W N + + +++++ + +AKE ++ ++ + +
Sbjct: 67 -KTLSHSWERSNRLSIMFMQMRIANNIKLTLPEH-DTAKEFFKTVEKRFRLANKSLVGTL 124
Query: 298 VKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL 357
+ + + + E LE++ + + A GM + E+F + IL+ PL + F I
Sbjct: 125 MTELTTMNFDGTRGMHEHILEMSNLTAKLKAFGMNVDESFLIQFILNSFPLQYGSFQIHY 184
Query: 358 MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELS---PAVNFGPRMREMSKKRRESE 414
++ + + +EE+R + + P +N P+ E ++R+ S
Sbjct: 185 NTIKDKWNVNELASMPVQEETRPKQQGHHSIHLISKGAKPPKINGPPQGIEAHERRQNS- 243
Query: 415 MDSKTVVCYNCRKKGHVAKHCHNKR 439
+ C C+K GHV + CH +R
Sbjct: 244 -----IKCRFCKKFGHVQRDCHKRR 263
>gi|391325711|ref|XP_003737371.1| PREDICTED: uncharacterized protein LOC100901660, partial
[Metaseiulus occidentalis]
Length = 547
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 117/275 (42%), Gaps = 40/275 (14%)
Query: 193 NGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVT---LCPQASS-EEVTRVKAAERKWLND 248
+G NY W + LK + A+ + D IV P+A +E+ K++
Sbjct: 79 DGSNYLSWKALLPTTLKLIPYAWEVVD-GKIVGDKGTTPEAKKKQELYNRGNLAAKYVLI 137
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
N+I + +LN ++L Y +SA +W++LK Y + V ++ +Q
Sbjct: 138 NSIHGNILLNLFYENLEY------TSAASIWKKLKETYGAATESQQFVAVTNFLSWQYRK 191
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYL----- 363
++S+ E ++ ++ + I E +++KLP +W LM + +L
Sbjct: 192 DRSIQENITAFKRLKYALDESQADIKEPIQCITLINKLPPNWA-----LMNVLWLPKPKT 246
Query: 364 --TFTMLMDHIKAEEESR-SHNKQEEPSKFVELS-PAVNFGPRMREMSKKRRESEMDSK- 418
TF L+D I E R S N +E + F +++ + N R +K R + ++
Sbjct: 247 EKTFNNLVDLILTEAARRESENPEEVTAMFTKMNLRSGNQRRPFRRYTKPRAATHQENSY 306
Query: 419 --------------TVVCYNCRKKGHVAKHCHNKR 439
T C C+K GH+A++C+ ++
Sbjct: 307 VSTSQQSSSKSSRVTTTCRICKKPGHIARNCYARK 341
>gi|208968932|dbj|BAG74297.1| polyprotein [Pyropia yezoensis]
Length = 1401
Score = 55.1 bits (131), Expect = 8e-05, Method: Composition-based stats.
Identities = 64/279 (22%), Positives = 111/279 (39%), Gaps = 50/279 (17%)
Query: 196 NYRVWAQQIELLLKQLKVAYVLTDPCPIVT-LCPQASSEE-------------------- 234
NYR W+ E L+ PCP+VT L A+S E
Sbjct: 18 NYRGWSNYAEAYLQDYGTWDATETPCPVVTPLATAAASPEGEPAGSAAARAAAQKLAMDL 77
Query: 235 ----VTRVKAAERKWLND----NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVY 286
+ VKA +RK + + H++N ++D +A E+WE L++++
Sbjct: 78 HEKQLKEVKAWKRKNVRALAQIKMAVKPHLMNMIAD---------CKTAAEVWECLRVLF 128
Query: 287 LDEEFGTKRSQVKKYIE-FQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSK 345
D E T+R ++++ + + +++ E I D + AG+ E+ IL
Sbjct: 129 -DHETATRRGELEEALATLRKQPNETIMEYVGRTKGIRDDLATAGVNKDEHSFCLDILRG 187
Query: 346 LPLSWKDFCIKLMRM-EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMR 404
LP +K L + LT + + + E E R+ + + P AV
Sbjct: 188 LPAPFKTIRTVLRNSGKLLTLPTIANRL-METELRAESDDDVPQ-------AVQAYLAAM 239
Query: 405 EMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ K ++ + D K V C+ C+K GH C+ +R E
Sbjct: 240 ALKKDEKKGQQDKKPV-CFYCKKPGHKIADCNERRAANE 277
>gi|348539212|ref|XP_003457083.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Oreochromis niloticus]
Length = 125
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +DG++ P KGI+L EQW +
Sbjct: 58 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMNQDGEMKPGKKGISLNPEQWNQLKDQISE 117
Query: 151 IDEAV 155
ID+A+
Sbjct: 118 IDDAI 122
>gi|226235017|dbj|BAH47466.1| polyprotein [Pyropia yezoensis]
Length = 1401
Score = 54.7 bits (130), Expect = 9e-05, Method: Composition-based stats.
Identities = 64/279 (22%), Positives = 111/279 (39%), Gaps = 50/279 (17%)
Query: 196 NYRVWAQQIELLLKQLKVAYVLTDPCPIVT-LCPQASSEE-------------------- 234
NYR W+ E L+ + PCP+VT L A+S E
Sbjct: 18 NYRGWSNYAEAYLQDNGTWDAIETPCPVVTPLATAAASPEGEPAGSAAARAAAQKLAMDL 77
Query: 235 ----VTRVKAAERKWLND----NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVY 286
+ VKA +RK + + H++N ++D +A E+WE L++++
Sbjct: 78 HEKQLKEVKAWKRKNVRALAQIKMAVKPHLMNMIAD---------CKTAAEVWECLRVLF 128
Query: 287 LDEEFGTKRSQVKKYIE-FQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSK 345
D E T+R ++++ + + +++ E I D + AG+ E+ IL
Sbjct: 129 -DHETATRRGELEEALATLRKQPNETIMEYVGRTKGIRDDLATAGVNKDEHSFCLDILRG 187
Query: 346 LPLSWKDFCIKLMRM-EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMR 404
LP +K L + LT + + + E E R+ + + P AV
Sbjct: 188 LPAPFKTIRTVLRNSGKLLTLPTITNRL-METELRAESDDDVPQ-------AVQAYLAAM 239
Query: 405 EMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ K + + D K V C+ C+K GH C+ +R E
Sbjct: 240 ALKKDEKRGQQDKKPV-CFYCKKPGHKIADCNERRAANE 277
>gi|21671931|gb|AAM74293.1|AC083944_11 Putative transposable element [Oryza sativa Japonica Group]
Length = 1169
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 38/198 (19%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVL-TDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
H F+G NY+ W + L L ++ +V P P S EE + + A+
Sbjct: 121 HAFDGSNYKRWKARALLWLTVMQCFFVSRGKPSE-----PPLSPEEEAKFEVAD------ 169
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ R +++ L+D + Y S K++W+ L+ + + G++ ++++ ++ M D
Sbjct: 170 -CLFRGALISVLADSIVDVY-MHMPSRKDMWDALQAKFRVSDAGSELYVMEQFYDYNMVD 227
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFT 366
++SV EQ VA G I++KLP SW DF L R E+ + T
Sbjct: 228 DRSVVEQ----------FVAGG-----------IIAKLPPSWSDFATSLKHKRQEF-SVT 265
Query: 367 MLMDHIKAEEESRSHNKQ 384
L+ + EE++R+ + +
Sbjct: 266 DLIGSLGVEEKARAKDNR 283
>gi|332021176|gb|EGI61561.1| Activated RNA polymerase II transcriptional coactivator p15
[Acromyrmex echinatior]
Length = 109
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIRE-YFRRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + L + R V ++ FKG+ +V IRE Y+ ++G L P KGI L+ +QWR F +
Sbjct: 41 DETVWDLGSNRQVNVRNFKGKYYVDIREMYYDKEGDLKPGKKGICLSMQQWRKFMDVVEE 100
Query: 151 IDEAV 155
+D+
Sbjct: 101 VDDVA 105
>gi|29788833|gb|AAP03379.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|50881449|gb|AAT85294.1| Gag and Pol protein, putative [Oryza sativa Japonica Group]
gi|108710326|gb|ABF98121.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 216
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Query: 273 SSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMM 332
SS K++W L+ + + G++ ++++ +++M D++S+ EQA E+ + +
Sbjct: 71 SSGKDMWGALEAKFGVSDAGSELYVMEQFYDYKMVDDRSIVEQAHEIQMLVKELENNNCE 130
Query: 333 IYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKF 390
+ + F V I++KLP SW DF L R E+ + T L+ + EE++R+ ++ K
Sbjct: 131 LPDKFVVGGIIAKLPPSWSDFATSLKHKRQEF-SVTDLIGSLGIEEKARA---KDNWGKK 186
Query: 391 VELSPAVNF 399
+E + N
Sbjct: 187 IEGGSSANL 195
>gi|47211870|emb|CAF89779.1| unnamed protein product [Tetraodon nigroviridis]
Length = 125
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 102 RTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
R V++++FKG+ + IREY+ DG++ P KGI+L EQW + ID+A+ K+
Sbjct: 68 RYVSVRDFKGKVLIDIREYWMNPDGEMKPGKKGISLNPEQWNQLKDQIADIDDAIKKI 125
>gi|328769088|gb|EGF79133.1| hypothetical protein BATDEDRAFT_26386 [Batrachochytrium
dendrobatidis JAM81]
Length = 127
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 53 GVVESFLLSTTESTDNRIEPDLEVEEQRAQIGKRINDDGDSIICK--------LSNKRTV 104
+VES L + +STD + DL+ ++ + Q + + + I K + K +
Sbjct: 13 ALVESDLENNAQSTDTIKDSDLQSKKPKTQKTSKPDSEAGQITIKPTGDLLLNIGGKNRL 72
Query: 105 AIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQ 159
+ ++ + V IREY+ +DG+ P AKGIAL+ W+ ++ ID+ + ++
Sbjct: 73 TVSKWNNKVLVGIREYYTKDGQEKPGAKGIALSPASWKMIKENADLIDKTIASLE 127
>gi|327308006|ref|XP_003238694.1| RNA polymerase II transcriptional coactivator [Trichophyton rubrum
CBS 118892]
gi|326458950|gb|EGD84403.1| RNA polymerase II transcriptional coactivator [Trichophyton rubrum
CBS 118892]
Length = 177
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 97 KLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVV 156
++S +R V I FKGR V++REY+ +DG+ +P KGI++T EQ+ LP I +
Sbjct: 60 EISRQRRVTISTFKGRVLVNVREYYEKDGQELPGKKGISMTLEQFNNLVTLLPEISAVIE 119
Query: 157 KMQSKL-RSESSG 168
+ K+ R + SG
Sbjct: 120 EKGGKVTRPDFSG 132
>gi|218197570|gb|EEC79997.1| hypothetical protein OsI_21648 [Oryza sativa Indica Group]
Length = 382
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 274 SAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMI 333
S K++W+ L+ + + G++ ++++ +++M D++SV EQA E+ +A + +
Sbjct: 5 SGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDDRSVVEQAHEIRMLAKELENNNYEL 64
Query: 334 YENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFV 391
+ F I++KLP SW DF L R E+ + + L+ + EE++R+ ++ K V
Sbjct: 65 PDKFVAGGIIAKLPHSWSDFATSLKHKRPEF-SVSDLIGSLGVEEKARA---KDVRGKKV 120
Query: 392 ELSPAVNFGPRMREMSKKRRESEMDSKTVV----------------CYNCRKKGHVAKHC 435
E + N + + + C+ C K GH AK C
Sbjct: 121 EGGSSANMVQKKNPHASHNNKKVKPDVKPKAVTNFKKKGKGKAKGDCFVCGKSGHWAKDC 180
>gi|240279940|gb|EER43444.1| RNA polymerase II transcriptional coactivator [Ajellomyces
capsulatus H143]
gi|325088656|gb|EGC41966.1| RNA polymerase II transcriptional coactivator [Ajellomyces
capsulatus H88]
Length = 156
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 85 KRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
K+I+ +GD +S R + + FKGR VS+REY+ +DG+ +P KGI++ +Q+
Sbjct: 47 KKIDSNGD-FYWNISRLRRLTVSSFKGRILVSVREYYEKDGQELPGKKGISMPLDQFNTL 105
Query: 145 SKSLPAIDEAV 155
+ +P ++ A+
Sbjct: 106 IQLIPNVETAI 116
>gi|225716216|gb|ACO13954.1| Activated RNA polymerase II transcriptional coactivator p15 [Esox
lucius]
Length = 129
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
+ ++ R V+++EFKG+ + IREY+ +DG + P KGI+L EQW + ID+
Sbjct: 65 MLQIGRMRYVSVREFKGKCLIDIREYWMNQDGDMKPGKKGISLNPEQWNQLKDQISDIDD 124
Query: 154 AVVKM 158
A+ ++
Sbjct: 125 AIKRI 129
>gi|154274416|ref|XP_001538059.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414499|gb|EDN09861.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 165
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 85 KRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
K+I+ +GD +S R + + FKGR VS+REY+ +DG+ +P KGI++ +Q+
Sbjct: 56 KKIDSNGD-FYWNISRLRRLTVSSFKGRILVSVREYYEKDGQELPGKKGISMPLDQFNTL 114
Query: 145 SKSLPAIDEAV 155
+ +P ++ A+
Sbjct: 115 IQLIPNVETAI 125
>gi|73963571|ref|XP_853832.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Canis lupus familiaris]
Length = 127
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R +++Q+FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 60 DDNMFQIGKMRYISVQDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD 119
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 120 IDDAVRKL 127
>gi|17542398|ref|NP_501750.1| Protein T13F2.2 [Caenorhabditis elegans]
gi|37089590|sp|Q94045.1|TCP4_CAEEL RecName: Full=Putative RNA polymerase II transcriptional
coactivator
gi|3879829|emb|CAB03353.1| Protein T13F2.2 [Caenorhabditis elegans]
Length = 124
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 82 QIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSE 139
++ R+ D + + ++ N R + +FKG+ +V+IREY+ R K++P+ KGI+L+
Sbjct: 49 EVSGRLKDSDGNEMFEIGNLRYATVSKFKGKEYVNIREYYIDRDSQKMMPSRKGISLSKA 108
Query: 140 QWRAFSKSLPAID 152
QW +P ID
Sbjct: 109 QWANLKDLIPEID 121
>gi|442747639|gb|JAA65979.1| Putative transcriptional coactivator p15 [Ixodes ricinus]
gi|442747641|gb|JAA65980.1| Putative transcriptional coactivator p15 [Ixodes ricinus]
Length = 114
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 71 EPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVP 129
+PD +++ A + N DG++ L+ KR + ++EFKGR V IRE++ +G L P
Sbjct: 30 KPD---DKKTASASQDTNADGEARFM-LAKKRYLTVREFKGRVMVDIREFYEDNNGDLKP 85
Query: 130 TAKGIALTSEQWRAFSKSLPAIDEAVVK 157
KGI L +QW A + ID A+ K
Sbjct: 86 GKKGICLQLDQWNALKGHIDDIDAAIRK 113
>gi|56755121|gb|AAW25740.1| unknown [Schistosoma japonicum]
gi|60687690|gb|AAX30178.1| SJCHGC01506 protein [Schistosoma japonicum]
Length = 117
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 91 GDSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSL 148
G + L+ K+ +++F+G+ FV IREY+ + G+L P KGI+L SEQW S+
Sbjct: 46 GGEQLIDLTGKKFACVRDFRGKVFVDIREYYEDKSSGELKPGKKGISLNSEQWEYLKSSI 105
Query: 149 PAIDEAV 155
+D+ +
Sbjct: 106 GELDDDI 112
>gi|221221098|gb|ACM09210.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
salar]
gi|221221258|gb|ACM09290.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
salar]
gi|221222030|gb|ACM09676.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
salar]
Length = 132
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 71 EPDLEVEEQRAQIG---KRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGK 126
+P L E R G K + + + ++ R V+++EFKG+ V IREY+ +DG+
Sbjct: 41 KPKLSGEGSRPGAGGSSKAADSKTEDGMFQIGRMRYVSVREFKGKCLVDIREYWMNQDGE 100
Query: 127 LVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
+ P KGI+L EQW + ID+A+
Sbjct: 101 MKPGKKGISLNPEQWTQLKDQMSEIDDAI 129
>gi|225715558|gb|ACO13625.1| Activated RNA polymerase II transcriptional coactivator p15 [Esox
lucius]
Length = 130
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSK 146
N D D ++ R V+++EFKG+ + IREY+ ++G++ P KGI+L EQW
Sbjct: 59 NKDKDDNKFQIGKMRYVSVREFKGKCLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKD 118
Query: 147 SLPAIDEAV 155
+ ID+AV
Sbjct: 119 QISEIDDAV 127
>gi|56605972|ref|NP_001008479.1| activated RNA polymerase II transcriptional coactivator p15 [Gallus
gallus]
gi|326934749|ref|XP_003213447.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Meleagris gallopavo]
gi|82081991|sp|Q5ZK63.1|TCP4_CHICK RecName: Full=Activated RNA polymerase II transcriptional
coactivator p15; AltName: Full=SUB1 homolog
gi|53132176|emb|CAG31880.1| hypothetical protein RCJMB04_12p22 [Gallus gallus]
Length = 126
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ ++G++ P KGI+L EQW + +
Sbjct: 59 DENMFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKEQISD 118
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 119 IDDAVRKL 126
>gi|221219230|gb|ACM08276.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
salar]
gi|221222044|gb|ACM09683.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
salar]
gi|225710320|gb|ACO11006.1| Activated RNA polymerase II transcriptional coactivator p15
[Caligus rogercresseyi]
Length = 132
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSK 146
N D D ++ R V+++EFKG+ + IREY+ ++G++ P KGI+L EQW
Sbjct: 61 NQDKDDNKFQIGKMRYVSVREFKGKCLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKD 120
Query: 147 SLPAIDEAV 155
+ ID+AV
Sbjct: 121 QISEIDDAV 129
>gi|342365847|gb|AEL30380.1| hypothetical protein 205D04_20 [Arachis hypogaea]
Length = 1597
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 45/282 (15%)
Query: 192 FNGKNYRVWAQQIELLLKQLKV---AYVLTDP-CPIVTLCPQASSEEVTRVKAAERKWLN 247
FNGKNY W +++++ ++ + +L P P VT S+E V +K E W +
Sbjct: 176 FNGKNYTYWKERMKIFVQAVDYRLWKIILEGPQYPTVT-----SAEGVVSLKP-EASWTD 229
Query: 248 DN------NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKY 301
++ N ++LN Y++ R ++AKE+W++L++ + K
Sbjct: 230 EDRKKVELNAKAINLLNCAISFKEYRWVSRCTTAKEIWDKLQITHEGTTIVKKTRTDMLN 289
Query: 302 IEFQMFDEK---SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLM 358
E++MF K S+ E N I + A G+ E+ V +L L W+ + +
Sbjct: 290 REYEMFAVKEGESIDELFERFNAIIVGLDALGITHSESVLVRRVLRCLTKEWETKALIIS 349
Query: 359 RMEYLTFTMLMDHIKAEEES--RSHNKQEEPSKFVELSPAVN-----------------F 399
L +M +D ++ + ++ K++ K + S N F
Sbjct: 350 ESSSLD-SMTVDDLRGNLLAFENTYLKKDSKKKGIAFSSMTNPLDEESSDNSFEHEFVLF 408
Query: 400 GPRMREMSKKR------RESEMDSKTVVCYNCRKKGHVAKHC 435
++R+M K + R + D V CYNC++ GH C
Sbjct: 409 AKKVRKMMKLKGKGSSSRRVKKDLSKVTCYNCKEMGHFKSDC 450
>gi|344272306|ref|XP_003407974.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Loxodonta africana]
gi|344297766|ref|XP_003420567.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Loxodonta africana]
Length = 127
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ ++G++ P KGI+L EQW + +
Sbjct: 60 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWSQLKEQISD 119
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 120 IDDAVRKL 127
>gi|427786067|gb|JAA58485.1| Putative activated rna polymerase ii transcriptional coactivator
p15-like protein [Rhipicephalus pulchellus]
Length = 113
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRR-DGKLVPTAKGIALTSEQWRAFSK 146
N+DG + L+ KR V ++EFKGR V IREY+ +G L P KGI L +QW A
Sbjct: 45 NEDG---MFMLAKKRYVTVREFKGRVMVDIREYYEDGNGDLKPGKKGICLQLDQWNALKN 101
Query: 147 SLPAIDEAVVK 157
+ ID A+ K
Sbjct: 102 QIDDIDAAIKK 112
>gi|449459620|ref|XP_004147544.1| PREDICTED: uncharacterized protein LOC101203583 [Cucumis sativus]
Length = 213
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV 238
+S ++L +E + NG NY W + ++ + +VLT+ CP P +++ +R
Sbjct: 3 SSIVQLLASE--KLNGDNYAAWKSNLNTIVVVDDLRFVLTEECP---QNPASNANRTSR- 56
Query: 239 KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
A +W+ N R +IL +SD L ++ + ++AKE+ L+ ++ E + V
Sbjct: 57 -DAYDRWIKANEKARVYILASMSDVLAKKH-ESLATAKEIMNSLRGMFGQPELSLRHEAV 114
Query: 299 KKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIK-- 356
K +M + SV E L++ + G I E VS IL LP S+ F
Sbjct: 115 KYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNAS 174
Query: 357 LMRMEYLTFTMLMDHIKAEEESRSHNKQEEPS 388
L ++E+ T+L + + + + KQ E +
Sbjct: 175 LNKIEFNLTTLLNELQRFQNLTMGKGKQVEAN 206
>gi|449472659|ref|XP_004153660.1| PREDICTED: uncharacterized protein LOC101223237, partial [Cucumis
sativus]
Length = 302
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
+ NG NY W + +L + +VLT+ CP AS++ T A +R W+ N
Sbjct: 13 KLNGDNYAAWKSNLNTILVVGDLRFVLTEECP----QNPASNDNRTSRDAYDR-WIKANE 67
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
R +IL +SD L ++ + ++AKE+ L+ ++ E + VK +M +
Sbjct: 68 KARVYILASMSDVLAKKH-ESLATAKEIMNSLRGMFGQPELSLRHEAVKYIYTKRMKEGT 126
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTML 368
SV E L++ + G I E VS IL P S+ F L ++E+ T+L
Sbjct: 127 SVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESFPKSFIPFQTNASLNKIEFNLTTLL 186
Query: 369 MDHIKAEEESRSHNKQEE 386
+ + + + KQ E
Sbjct: 187 NELQRFQNLTMGKGKQVE 204
>gi|453084928|gb|EMF12972.1| RNA polymerase II transcriptional coactivator [Mycosphaerella
populorum SO2202]
Length = 172
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSL 148
D + ++S KR + + EFKG V +REY+ +DG+ +P KGI++T +Q+ + L
Sbjct: 45 DKDGGVYWEISGKRRLQLSEFKGNTMVGVREYYEKDGQALPGKKGISMTLDQFNTIVELL 104
Query: 149 PAIDEAVVK 157
P ++ + K
Sbjct: 105 PQLESELKK 113
>gi|225560385|gb|EEH08666.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 156
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 85 KRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
K+I+ +GD +S R + + FKGR VS+REY+ +DG+ +P KGI++ +Q+
Sbjct: 47 KKIDSNGD-FYWNISRLRRLTVSSFKGRILVSVREYYEKDGQELPGKKGISMPLDQFNTL 105
Query: 145 SKSLPAIDEAV 155
+ +P ++ A+
Sbjct: 106 IQLIPNVETAI 116
>gi|225715646|gb|ACO13669.1| Activated RNA polymerase II transcriptional coactivator p15 [Esox
lucius]
Length = 129
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 102 RTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
R V+++EFKG+ + IREY+ +DG + P KGI+L EQW + ID+A+ ++
Sbjct: 72 RYVSVREFKGKCLIDIREYWMNQDGDMKPGKKGISLNPEQWNQLKDQISDIDDAIKRI 129
>gi|194759630|ref|XP_001962050.1| GF15272 [Drosophila ananassae]
gi|190615747|gb|EDV31271.1| GF15272 [Drosophila ananassae]
Length = 111
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 102 RTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
R V I EF+GR V IRE++ +DGK++P KGI+L+ +QW+ + I A+
Sbjct: 56 RLVTINEFRGRKMVDIREHYEKDGKVLPGKKGISLSIQQWKKLIEQADEITGAI 109
>gi|357167074|ref|XP_003580991.1| PREDICTED: uncharacterized protein LOC100835998 [Brachypodium
distachyon]
Length = 301
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 105/230 (45%), Gaps = 35/230 (15%)
Query: 175 ANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQL---KVAYVLTDPCPIVTLCPQAS 231
A SM P+ F G NY+ W ++ L + + YVL P T + +
Sbjct: 53 AASMKPPV---------FEGVNYKRWRARVVLWFQTMSCYNTIYVL--PEGNHTPAEEEA 101
Query: 232 SEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEF 291
+++ + R L DN + + LN + K++W+ L+ + +
Sbjct: 102 FQKLEIIFLLRRSILGDNIVDSYLSLN---------------NGKDMWDALERKFGVSDA 146
Query: 292 GTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWK 351
GT+ ++++ +++M +++ + EQA E+ +A + ++ F I++KLP SW+
Sbjct: 147 GTELYVMEQFYDYKMVEDRPIVEQAHEIQSLAKELEHFTCVLPNKFVAGGIIAKLPPSWR 206
Query: 352 DFC--IKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF 399
F +K R E+ + T L+ + EE++R+ + + ++ E + NF
Sbjct: 207 HFATSLKHKRQEF-SVTDLIGTLDVEEKARAKDTR---ARGTEGGSSANF 252
>gi|221219846|gb|ACM08584.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
salar]
Length = 132
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSK 146
N D D ++ R V+++EFKG+ + IREY+ ++G++ P KGI+L EQW
Sbjct: 61 NKDKDDNKFRIGKMRYVSVREFKGKCLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKD 120
Query: 147 SLPAIDEAV 155
+ ID+AV
Sbjct: 121 QISEIDDAV 129
>gi|223646418|gb|ACN09967.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
salar]
gi|223672265|gb|ACN12314.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
salar]
Length = 150
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSK 146
N D D ++ R V+++EFKG+ + IREY+ ++G++ P KGI+L EQW
Sbjct: 79 NKDKDDNKFQIGKMRYVSVREFKGKCLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKD 138
Query: 147 SLPAIDEAV 155
+ ID+AV
Sbjct: 139 QISEIDDAV 147
>gi|432105540|gb|ELK31737.1| Activated RNA polymerase II transcriptional coactivator p15 [Myotis
davidii]
Length = 127
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ ++G++ P KGI+L EQW + +
Sbjct: 60 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWSQLKEQISD 119
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 120 IDDAVRKL 127
>gi|71000802|ref|XP_755082.1| RNA polymerase II transcriptional coactivator [Aspergillus
fumigatus Af293]
gi|66852720|gb|EAL93044.1| RNA polymerase II transcriptional coactivator, putative
[Aspergillus fumigatus Af293]
gi|159129181|gb|EDP54295.1| RNA polymerase II transcriptional coactivator, putative
[Aspergillus fumigatus A1163]
Length = 165
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 86 RINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFS 145
+I+ +GD +LS R V I F+G+ V+IREY+ +DG+ +P KGI+L +Q+
Sbjct: 47 KIDANGDKF-WELSKMRRVTISSFRGKTLVNIREYYEKDGQELPGKKGISLPIDQFSVLV 105
Query: 146 KSLPAIDEAV 155
LP I+ A+
Sbjct: 106 TLLPDIEMAL 115
>gi|77553430|gb|ABA96226.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 975
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 28/235 (11%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE +A++ + R +++ L+D++ Y S K++W+ L+ +
Sbjct: 14 PPLSPEEEAEFEASD-------CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFG 65
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
+ ++ ++++ +++M D++SV EQA E+ +A + + + F I++KLP
Sbjct: 66 VSDADSELYVMEQFYDYKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLP 125
Query: 348 LSWKDFCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREM 406
SW DF L + + + + L+ + EE+ R+ + + K VE + N +
Sbjct: 126 PSWSDFATSLKHKRQEFSVSDLIGSLGVEEKVRAKDVR---GKKVEGGSSANMVQKKNSH 182
Query: 407 SKKRRESEMDSKTVV----------------CYNCRKKGHVAKHCHNKRLHQEIN 445
+ + C+ C K GH AK C ++ + N
Sbjct: 183 ASHNNKKVKPDVKPKAATNFKKKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 237
>gi|387018208|gb|AFJ51222.1| Activated RNA polymerase II transcriptional coactivator p15-like
[Crotalus adamanteus]
Length = 131
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V +++FKG+ + IREY+ ++G++ P KGI+L EQW + +
Sbjct: 64 DENMFQIGKMRYVNVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWSQLKEQISD 123
Query: 151 IDEAVVKM 158
IDEAV K+
Sbjct: 124 IDEAVRKL 131
>gi|449269656|gb|EMC80408.1| Activated RNA polymerase II transcriptional coactivator p15
[Columba livia]
Length = 126
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ ++G++ P KGI+L EQW + +
Sbjct: 59 DENMFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKEQISD 118
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 119 IDDAVRKL 126
>gi|363747248|ref|XP_001236661.2| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Gallus gallus]
Length = 126
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ ++G++ P KGI+L EQW + +
Sbjct: 59 DENMFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKEQISD 118
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 119 IDDAVRKL 126
>gi|213514016|ref|NP_001134477.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
salar]
gi|209733326|gb|ACI67532.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
salar]
gi|209733612|gb|ACI67675.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
salar]
gi|290562107|gb|ADD38450.1| Activated RNA polymerase II transcriptional coactivator p15
[Lepeophtheirus salmonis]
Length = 132
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSK 146
N D D ++ R V+++EFKG+ + IREY+ ++G++ P KGI+L EQW
Sbjct: 61 NKDKDDNKFQIGKMRYVSVREFKGKCLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKD 120
Query: 147 SLPAIDEAV 155
+ ID+AV
Sbjct: 121 QISEIDDAV 129
>gi|348686058|gb|EGZ25873.1| hypothetical protein PHYSODRAFT_297366 [Phytophthora sojae]
Length = 268
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 87 INDDGD--SIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
+ DGD +I LSNKR ++ F+ + IRE++ +DG P KGI+L+ EQW A
Sbjct: 195 LRPDGDVRAIAVPLSNKRRATVRYFRNGVLIDIREFYDQDGVSKPGKKGISLSMEQWTAL 254
Query: 145 SKSLPAIDEAVVKM 158
K I EA ++
Sbjct: 255 QKIADEITEAADRL 268
>gi|346970039|gb|EGY13491.1| hypothetical protein VDAG_00173 [Verticillium dahliae VdLs.17]
Length = 160
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAI 151
LS+KR + I +FK ++IREY+++D ++P KGI+L+ Q+ A K+ PAI
Sbjct: 55 LSSKRRIGISKFKDMTMINIREYYQKDDDMLPGKKGISLSLPQFEALLKAAPAI 108
>gi|259089339|ref|NP_001158706.1| Activated RNA polymerase II transcriptional coactivator p15
[Oncorhynchus mykiss]
gi|225704320|gb|ACO08006.1| Activated RNA polymerase II transcriptional coactivator p15
[Oncorhynchus mykiss]
Length = 132
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSK 146
N D D ++ R V+++EFKG+ + IREY+ ++G++ P KGI+L EQW
Sbjct: 61 NKDKDDNKFQIGKMRYVSVREFKGKCLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKD 120
Query: 147 SLPAIDEAV 155
+ ID+AV
Sbjct: 121 QISEIDDAV 129
>gi|16905159|gb|AAL31029.1|AC078948_13 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 398
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 14/131 (10%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EFQMFDEK 310
IL+ L D L Y T AKELW+ L + +FG + YI +++M D +
Sbjct: 34 ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDYKMADNR 87
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTML 368
SV EQA E+ +A ++ + F I++KLP SW+ F +K R EY + L
Sbjct: 88 SVVEQAHEIQTMAKEFELLKCVLPDKFVDGCIIAKLPPSWRGFGTALKHKRQEY-SVEGL 146
Query: 369 MDHIKAEEESR 379
+ + EE++R
Sbjct: 147 IASLDVEEKAR 157
>gi|67539272|ref|XP_663410.1| hypothetical protein AN5806.2 [Aspergillus nidulans FGSC A4]
gi|40739125|gb|EAA58315.1| hypothetical protein AN5806.2 [Aspergillus nidulans FGSC A4]
gi|259480040|tpe|CBF70810.1| TPA: RNA polymerase II transcriptional coactivator, putative
(AFU_orthologue; AFUA_2G07460) [Aspergillus nidulans
FGSC A4]
Length = 168
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 72 PDLE-VEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPT 130
PD+ + R ++ R D I ++S R V I F+G+ V+IREY+ +DG+ +P
Sbjct: 32 PDVAGFDNSRPELVARKEDSNGDIYWEISKMRRVTISSFRGKTMVNIREYYEKDGEELPG 91
Query: 131 AKGIALTSEQWRAFSKSLPAID 152
KGI+L +Q+ + LP I+
Sbjct: 92 KKGISLPIDQFSSLVTLLPEIE 113
>gi|296821528|ref|XP_002850145.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238837699|gb|EEQ27361.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 176
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 73 DLEVEEQRAQIGKRIN-----DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKL 127
DL + AQ+ +++ D ++S +R V I FKGR V++REY+ +DG+
Sbjct: 35 DLGKADANAQVSSKLDKAPKTDSNGDPYWEVSRQRRVTISTFKGRVLVNVREYYEKDGQD 94
Query: 128 VPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKL 162
+P KGI++T EQ+ LP I V + K+
Sbjct: 95 LPGKKGISMTLEQFNNLIALLPEIATVVEQKGGKV 129
>gi|221221586|gb|ACM09454.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
salar]
Length = 132
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSK 146
N D D ++ R V+++EFKG+ + IREY+ ++G++ P KGI+L EQW
Sbjct: 61 NKDKDDNKFQIGKMRYVSVREFKGKCLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKD 120
Query: 147 SLPAIDEAV 155
+ ID+AV
Sbjct: 121 QISEIDDAV 129
>gi|346324023|gb|EGX93621.1| RNA polymerase II transcriptional coactivator [Cordyceps militaris
CM01]
Length = 150
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAK--GIALTSEQWRAFSK 146
DD + ++SN R V I EFKG +SIREY+ ++GKL+ K GI++ +Q+ A K
Sbjct: 39 DDEGNPFWEISNTRRVGISEFKGVCMISIREYYEKNGKLLHGKKIQGISMPVDQYAALLK 98
Query: 147 SLPAI 151
LP+I
Sbjct: 99 LLPSI 103
>gi|378732288|gb|EHY58747.1| hypothetical protein HMPREF1120_06750 [Exophiala dermatitidis
NIH/UT8656]
Length = 166
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVK 157
+S R V I +FKG+ V+IREY+++D + +P KGI+++ EQ+ A +P I+E ++K
Sbjct: 57 ISKNRRVTISDFKGKKLVNIREYYQKDNEWLPGKKGISMSLEQYSALIGIMPQIEE-LLK 115
Query: 158 MQS 160
Q
Sbjct: 116 QQG 118
>gi|340923611|gb|EGS18514.1| RNA polymerase II transcriptional coactivator-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 157
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRR-DGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVV 156
+ + R V + +FKG ++IREYF DG++ P KGI+LT +Q++A ++P +++ +
Sbjct: 46 IGHNRRVGVSKFKGTTLINIREYFTAPDGEMRPGKKGISLTLDQYKALLGAIPELNDELR 105
Query: 157 KMQSKLRSESSGEQNKDVANSMTSP 181
+ S+GE + + S P
Sbjct: 106 SQGHAVDDPSAGETSGNAVKSEKKP 130
>gi|149586250|ref|XP_001521441.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Ornithorhynchus anatinus]
Length = 125
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ ++G++ P KGI+L EQW + +
Sbjct: 58 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWSQLKEQISD 117
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 118 IDDAVRKL 125
>gi|126321593|ref|XP_001365728.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Monodelphis domestica]
gi|395511511|ref|XP_003760002.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 [Sarcophilus harrisii]
Length = 126
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ ++G++ P KGI+L EQW + +
Sbjct: 59 DDHMFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWSQLKEQISD 118
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 119 IDDAVRKL 126
>gi|13786449|gb|AAK39574.1|AC025296_9 putative retrotransposon polyprotein [Oryza sativa Japonica Group]
Length = 208
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 32/195 (16%)
Query: 274 SAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMI 333
S K++W+ L+ + + G++ ++++ +++M D++SV EQA E+ +A + +
Sbjct: 5 SGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDDRSVVEQAYEIQMLAKELENNNCEL 64
Query: 334 YENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVE 392
+ F I++KLP SW D L + + + L+ + EE++R +K+V
Sbjct: 65 PDKFVAGGIIAKLPPSWSDLATSLKHKRQEFSVPDLIGSLGVEEKAR--------AKYVR 116
Query: 393 LSPAVNFGPRMREMSKKRRESEMDSKTVV----------------------CYNCRKKGH 430
V G + KK + ++K V C+ C K GH
Sbjct: 117 -GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKKGKGKAKGDCFVCGKSGH 175
Query: 431 VAKHCHNKRLHQEIN 445
AK C ++ + N
Sbjct: 176 WAKDCPERKDRKSAN 190
>gi|225704796|gb|ACO08244.1| Activated RNA polymerase II transcriptional coactivator p15
[Oncorhynchus mykiss]
Length = 132
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSK 146
N D D ++ R V+++EFKG+ + IREY+ ++G++ P KGI+L EQW
Sbjct: 61 NKDKDDNKFQIGKMRYVSVREFKGKCLIDIREYWMDQEGEMRPGRKGISLNPEQWNQLKD 120
Query: 147 SLPAIDEAV 155
+ ID+AV
Sbjct: 121 QISEIDDAV 129
>gi|320590592|gb|EFX03035.1| RNA polymerase 2 transcriptional [Grosmannia clavigera kw1407]
Length = 164
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAI 151
LS R V I +FK ++IREY+ G++ P KGI+LT +Q++ F K+LP I
Sbjct: 59 LSKTRRVGISQFKNNTLINIREYYESAGQMRPGKKGISLTLDQFKMFMKALPHI 112
>gi|392577681|gb|EIW70810.1| hypothetical protein TREMEDRAFT_61316 [Tremella mesenterica DSM
1558]
Length = 151
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFR--RDGKLVPTAKGIALTSEQWRAFS 145
+DD LS+ R V+I +F+ + + IREY++ G++ P KGI+LT EQW +F
Sbjct: 78 HDDKGQPFLALSDYRRVSISKFQDKTLIDIREYYKDKGSGEMKPGKKGISLTCEQWESFK 137
Query: 146 KSLPAIDE 153
++ +ID+
Sbjct: 138 GNISSIDK 145
>gi|119480475|ref|XP_001260266.1| RNA polymerase II transcriptional coactivator, putative
[Neosartorya fischeri NRRL 181]
gi|119408420|gb|EAW18369.1| RNA polymerase II transcriptional coactivator, putative
[Neosartorya fischeri NRRL 181]
Length = 165
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 86 RINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFS 145
+++ +GD +LS R V I F+G+ V+IREY+ +DG+ +P KGI+L +Q+
Sbjct: 47 KVDANGDKF-WELSKMRRVTISSFRGKTLVNIREYYEKDGQELPGKKGISLPIDQFSVLV 105
Query: 146 KSLPAIDEAV 155
LP I+ A+
Sbjct: 106 TLLPDIEMAL 115
>gi|302422106|ref|XP_003008883.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261352029|gb|EEY14457.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 160
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAI 151
LS+KR + I +FK ++IREY+++D ++P KGI+L+ Q+ A K+ PAI
Sbjct: 54 LSSKRRIGISKFKDMTMINIREYYQKDDDMLPGKKGISLSLPQFEALLKAAPAI 107
>gi|195147782|ref|XP_002014853.1| GL18728 [Drosophila persimilis]
gi|198474239|ref|XP_001356612.2| GA21044 [Drosophila pseudoobscura pseudoobscura]
gi|194106806|gb|EDW28849.1| GL18728 [Drosophila persimilis]
gi|198138305|gb|EAL33676.2| GA21044 [Drosophila pseudoobscura pseudoobscura]
Length = 117
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKS 147
DG++ L R V I EF+GR V IRE++ ++G+ +P KGI L+ QW+ +
Sbjct: 48 GGDGEATTWTLERMRQVRINEFRGRKMVDIREFYEKNGETLPGKKGICLSILQWKKLLEH 107
Query: 148 LPAIDEAV 155
I +AV
Sbjct: 108 ADEITKAV 115
>gi|302653276|ref|XP_003018466.1| RNA polymerase II transcriptional coactivator, putative
[Trichophyton verrucosum HKI 0517]
gi|291182115|gb|EFE37821.1| RNA polymerase II transcriptional coactivator, putative
[Trichophyton verrucosum HKI 0517]
Length = 177
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 97 KLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVV 156
++S +R V I FKGR V++ EY+ +DG+ +P KGI++T EQ+ + LP I +
Sbjct: 60 EISRQRRVTISTFKGRVLVNVSEYYEKDGQELPGKKGISMTLEQFNSLVTLLPEISAVIE 119
Query: 157 KMQSKL 162
+ K+
Sbjct: 120 QKGGKV 125
>gi|171691751|ref|XP_001910800.1| hypothetical protein [Podospora anserina S mat+]
gi|170945824|emb|CAP72624.1| unnamed protein product [Podospora anserina S mat+]
Length = 168
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 84 GKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRR-DGKLVPTAKGIALTSEQWR 142
GK + +G++ +L N R V +FK V++REY+ DG+L P KGI+L+ +Q++
Sbjct: 42 GKGTDGEGNAY-WELGNNRRVGASKFKNATLVNLREYYTTPDGELRPGKKGISLSIDQYK 100
Query: 143 AFSKSLPAIDE 153
AF K++P ++E
Sbjct: 101 AFLKAIPQLNE 111
>gi|357510577|ref|XP_003625577.1| Ubiquitin-protein ligase [Medicago truncatula]
gi|355500592|gb|AES81795.1| Ubiquitin-protein ligase [Medicago truncatula]
Length = 1405
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 117/264 (44%), Gaps = 32/264 (12%)
Query: 188 ELHRFNGKN-YRVWAQQIELLLKQLKVAYVLTDPCPI-VTLCPQASSEEVTRVKAAERKW 245
++ +F G N + +W ++E +L Q K L + VT+ +E V + ++A
Sbjct: 6 DIEKFTGDNDFGLWKVKMEAVLIQQKCEKALKGEGSLPVTMSQAEKTEMVDKARSA---- 61
Query: 246 LNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQ 305
++ L D + + +K ++A +W +L+ +Y+ + ++ ++ F+
Sbjct: 62 ----------VVLCLGDKVLREVAKEATAA-SIWAKLESLYMTKSLAHRQFLKQQLYSFR 110
Query: 306 MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTF 365
M + K++ EQ E NKI D + + + + ++L LP S++ F ++ + T
Sbjct: 111 MVESKAIMEQLTEFNKILDDLENIEVQLEDEDKAILLLCALPKSFESFKDTMLYGKEGTV 170
Query: 366 TM--LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCY 423
T+ + ++ +E ++S + E + + ++ G R S + E C+
Sbjct: 171 TLEEVQAALRTKELTKSKDLTHEHGEGLSVTRGNGGGRGNRRKSGNKSRFE-------CF 223
Query: 424 NCRKKGHVAKHCHNKRLHQEINDN 447
NC K GH K C EIN N
Sbjct: 224 NCHKMGHFKKDC------PEINGN 241
>gi|51038150|gb|AAT93953.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038210|gb|AAT94013.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 457
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 111/265 (41%), Gaps = 48/265 (18%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V TD P ++ Q +E T +
Sbjct: 116 KFTGVHFKRWQIRVTLWLTAMKCFWVSTDKPMGVLNADQQKEFDEATTLFVG-------- 167
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C IL+ L D L Y T + +E +Y+ E+F +++M D
Sbjct: 168 --C---ILSVLGDRLVEVYMHMTDA-----KEFNDLYIMEQF----------HDYKMADN 207
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTM 367
+SV EQA E+ A + ++ + F ++KL SW+ F +K R EY +
Sbjct: 208 RSVVEQAHEIQTTAKELELLKCVLPDKFVAGCTIAKLTPSWRGFGTALKHKRQEY-SVEG 266
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV------- 420
L+ + EE++R +++ SK N + + SK + +++ +
Sbjct: 267 LIASLDVEEKAR---EKDAASKGDGGQSTANVVHKAQNKSKGKYKAQQTTNFKKKNNNNN 323
Query: 421 ------VCYNCRKKGHVAKHCHNKR 439
C+ C + G++A+ C ++
Sbjct: 324 PNQDERTCFVCGQPGYLARKCPQRK 348
>gi|449466213|ref|XP_004150821.1| PREDICTED: uncharacterized protein LOC101203599 [Cucumis sativus]
Length = 359
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 10/210 (4%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV 238
+S ++L +E + NG NY W + +L + +VLT+ CP AS++ T
Sbjct: 3 SSIVQLLASE--KLNGDNYAAWKSNLNTILVVGDLRFVLTEECP----QNPASNDNRTSR 56
Query: 239 KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
A +R W+ N R +IL +SD L ++ + ++AKE+ L+ ++ E + V
Sbjct: 57 DAYDR-WIKANEKARVYILASMSDVLAKKH-ESLATAKEIMNSLRGMFGQPELSLRHEAV 114
Query: 299 KKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIK 356
K +M + SV E L++ + G I E VS IL L S+ F
Sbjct: 115 KYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLSKSFIPFQTNAS 174
Query: 357 LMRMEYLTFTMLMDHIKAEEESRSHNKQEE 386
L ++E+ T+L + + + + KQ E
Sbjct: 175 LDKIEFNLTTLLNELQRFQNLTMGKGKQVE 204
>gi|195433631|ref|XP_002064813.1| GK15001 [Drosophila willistoni]
gi|194160898|gb|EDW75799.1| GK15001 [Drosophila willistoni]
Length = 1249
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 12/176 (6%)
Query: 268 YSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIV 327
Y K +A E W L+ V+ + K S K + +M D + + + + D +
Sbjct: 69 YIKNCLTAFEAWTRLRDVHQPKGPVRKVSLYNKLLSLRMTDGQDMPSYINGFSDVLDQLA 128
Query: 328 AAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTMLMDHIKAEEESR--SHNKQ 384
AG+ I E ++LS LP +++F + + R + +F +L +K E E + + K+
Sbjct: 129 GAGVQINEELRTIILLSSLPPVYENFVVAIETRDDLPSFEILCIKLKEEAERKRLTVTKE 188
Query: 385 EEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRL 440
FV + + R ++ R ++ + + CY C ++GHV C +R+
Sbjct: 189 NGQEAFVAM--------QNRNRNQNAR-TQRNRSQITCYKCGRQGHVKAQCGKERV 235
>gi|307185183|gb|EFN71322.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Camponotus floridanus]
Length = 491
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 9/257 (3%)
Query: 187 TELHRFNGKNYRVWAQQIE-LLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKW 245
T L + NY W Q+E LL+K YV + P T+ A+ E + A W
Sbjct: 1 TRLELLSKSNYDTWKIQVEALLIKNDTWGYVSGEK-PKPTISTDATMREASL--ATYNAW 57
Query: 246 LNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQ 305
+ + + ++ ++ Q K ++K++W++L+ +Y + K + +K + +
Sbjct: 58 ITGDRKAKSDLILSMNPSELKQI-KGCETSKDVWDKLESIYASKGPARKATLLKSLMLRK 116
Query: 306 MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF-CIKLMRMEYLT 364
M D+ V + +L D + + + I + +IL LP S+ F C R +
Sbjct: 117 MPDDGDVKDHLNDLFDAVDKLQSMNVEINGDMLAVIILYSLPESYDTFRCAIESRDDLPD 176
Query: 365 FTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRM--REMSKKRRESEMDSKTVVC 422
L I E E+R ++ + + L N P + K + S +K + C
Sbjct: 177 VETLKIKIFEESEARKRKISDDGAGAL-LVKHQNQQPHTSNNKTGKNIKNSSSSNKRIKC 235
Query: 423 YNCRKKGHVAKHCHNKR 439
C+K GH A +C+ KR
Sbjct: 236 NYCKKIGHKAANCYAKR 252
>gi|431917267|gb|ELK16803.1| Activated RNA polymerase II transcriptional coactivator p15
[Pteropus alecto]
Length = 127
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 60 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD 119
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 120 IDDAVRKL 127
>gi|301769081|ref|XP_002919957.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Ailuropoda melanoleuca]
gi|345798927|ref|XP_536425.3| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Canis lupus familiaris]
gi|410949730|ref|XP_003981571.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 [Felis catus]
Length = 127
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 60 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD 119
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 120 IDDAVRKL 127
>gi|384944052|gb|AFI35631.1| activated RNA polymerase II transcriptional coactivator p15 [Macaca
mulatta]
Length = 127
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 60 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD 119
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 120 IDDAVRKL 127
>gi|291395203|ref|XP_002714157.1| PREDICTED: activated RNA polymerase II transcription cofactor 4
[Oryctolagus cuniculus]
Length = 127
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRR-DGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 60 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD 119
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 120 IDDAVRKL 127
>gi|358369717|dbj|GAA86330.1| hypothetical protein AKAW_04444 [Aspergillus kawachii IFO 4308]
Length = 168
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 13/105 (12%)
Query: 72 PDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTA 131
PD + A GK ++ +GD + ++S R + I F+G+ VSIREY+ +DG +P
Sbjct: 35 PDPNHTDLLAGQGK-LDSNGD-LYWEISKARRLTISSFRGKTLVSIREYYEKDGHELPGK 92
Query: 132 KGIALTSEQWRAFSKSLPAID-------EAVVKMQ----SKLRSE 165
KGI+L +Q+ + + LP I+ E++ + Q SKL SE
Sbjct: 93 KGISLPIDQFSSLVRLLPHIETTLQNKGESIPRPQYDSDSKLTSE 137
>gi|291244700|ref|XP_002742232.1| PREDICTED: conserved hypothetical protein-like [Saccoglossus
kowalevskii]
Length = 183
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 17/119 (14%)
Query: 52 RGVVESFLLSTTEST-------DNRIEPDLEVEEQRAQIGKRINDDGDSIICKL---SNK 101
R V S +T+ES ++ PDL ++ I G++I +L S
Sbjct: 70 RSTVNSLATTTSESMRSSTGECSKKVAPDLSAMGAKSST---IAPRGENIFTRLICSSKS 126
Query: 102 RTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQS 160
V I F+G+ +V IREY+ +G PT +G+ALT EQ+ F + LP I+ + K ++
Sbjct: 127 LYVTINSFRGKRYVHIREYY--NG--YPTKRGVALTMEQYNNFIEILPQINSVIRKQKT 181
>gi|340381278|ref|XP_003389148.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Amphimedon queenslandica]
Length = 112
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
+ LS KR V ++ FKGR + IREY+ DG+ P KGI+L+ +QW +++ IDE
Sbjct: 48 LIPLSAKRFVNVRTFKGRIMIDIREYYVNDDGENRPGKKGISLSVDQWEKLKEAMETIDE 107
Query: 154 AV 155
+
Sbjct: 108 RI 109
>gi|62088150|dbj|BAD92522.1| activated RNA polymerase II transcription cofactor 4 variant [Homo
sapiens]
Length = 134
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 67 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD 126
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 127 IDDAVRKL 134
>gi|157427940|ref|NP_001098877.1| activated RNA polymerase II transcriptional coactivator p15 [Bos
taurus]
gi|157278936|gb|AAI34491.1| SUB1 protein [Bos taurus]
gi|296475720|tpg|DAA17835.1| TPA: activated RNA polymerase II transcription cofactor 4 [Bos
taurus]
Length = 127
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 60 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDAEGEMKPGRKGISLNPEQWSQLKEQISD 119
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 120 IDDAVRKL 127
>gi|301111890|ref|XP_002905024.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095354|gb|EEY53406.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 244
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 94 IICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
++ +LS+KR V ++++KG FV IREY+ G+ P KGI+L+ +QW AI E
Sbjct: 89 VVFELSSKRRVTVRKWKGMKFVDIREYYDDKGQAKPGKKGISLSPDQWEKLFGFSDAIAE 148
Query: 154 AV 155
A+
Sbjct: 149 AI 150
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 87 INDDGD--SIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
+ DG+ +I LS+KR V ++ F + +R ++ +DG P KGI+L+ +QW A
Sbjct: 171 LRPDGNVRAIALPLSSKRRVTVRYFNNAVLIDLRGFYDQDGVSKPGKKGISLSKDQWDAL 230
>gi|16307067|gb|AAH09610.1| SUB1 homolog (S. cerevisiae) [Homo sapiens]
Length = 127
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 60 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD 119
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 120 IDDAVRKL 127
>gi|197098442|ref|NP_001126574.1| activated RNA polymerase II transcriptional coactivator p15 [Pongo
abelii]
gi|217330646|ref|NP_006704.3| activated RNA polymerase II transcriptional coactivator p15 [Homo
sapiens]
gi|386781476|ref|NP_001248140.1| activated RNA polymerase II transcriptional coactivator p15 [Macaca
mulatta]
gi|114600767|ref|XP_001154506.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 isoform 3 [Pan troglodytes]
gi|114600769|ref|XP_001154561.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 isoform 4 [Pan troglodytes]
gi|114600771|ref|XP_001154682.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 isoform 6 [Pan troglodytes]
gi|114600773|ref|XP_001154622.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 isoform 5 [Pan troglodytes]
gi|149732963|ref|XP_001500513.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Equus caballus]
gi|296194833|ref|XP_002745128.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like isoform 1 [Callithrix jacchus]
gi|311272155|ref|XP_003133324.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Sus scrofa]
gi|332821622|ref|XP_003310805.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 [Pan troglodytes]
gi|348568984|ref|XP_003470278.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Cavia porcellus]
gi|390460075|ref|XP_003732415.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like isoform 2 [Callithrix jacchus]
gi|390460077|ref|XP_003732416.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like isoform 3 [Callithrix jacchus]
gi|390460079|ref|XP_003732417.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like isoform 4 [Callithrix jacchus]
gi|395840243|ref|XP_003792973.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 [Otolemur garnettii]
gi|397495433|ref|XP_003818560.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 isoform 2 [Pan paniscus]
gi|397495435|ref|XP_003818561.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 isoform 3 [Pan paniscus]
gi|402871257|ref|XP_003899589.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 [Papio anubis]
gi|402871259|ref|XP_003899590.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 [Papio anubis]
gi|402871261|ref|XP_003899591.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 [Papio anubis]
gi|402871263|ref|XP_003899592.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 [Papio anubis]
gi|402871265|ref|XP_003899593.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 [Papio anubis]
gi|402912855|ref|XP_003918955.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Papio anubis]
gi|403290297|ref|XP_003936258.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 [Saimiri boliviensis boliviensis]
gi|403290299|ref|XP_003936259.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 [Saimiri boliviensis boliviensis]
gi|426246672|ref|XP_004017116.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 [Ovis aries]
gi|1709514|sp|P53999.3|TCP4_HUMAN RecName: Full=Activated RNA polymerase II transcriptional
coactivator p15; AltName: Full=Positive cofactor 4;
Short=PC4; AltName: Full=SUB1 homolog; AltName: Full=p14
gi|75041237|sp|Q5R6D0.1|TCP4_PONAB RecName: Full=Activated RNA polymerase II transcriptional
coactivator p15; AltName: Full=SUB1 homolog
gi|75077272|sp|Q4R947.1|TCP4_MACFA RecName: Full=Activated RNA polymerase II transcriptional
coactivator p15; AltName: Full=SUB1 homolog
gi|531395|gb|AAA20980.1| PC4 [Homo sapiens]
gi|619161|emb|CAA56200.1| PC4, p15 [Homo sapiens]
gi|14714777|gb|AAH10537.1| SUB1 homolog (S. cerevisiae) [Homo sapiens]
gi|17390420|gb|AAH18189.1| SUB1 homolog (S. cerevisiae) [Homo sapiens]
gi|18490624|gb|AAH22339.1| SUB1 homolog (S. cerevisiae) [Homo sapiens]
gi|48145921|emb|CAG33183.1| PC4 [Homo sapiens]
gi|55731955|emb|CAH92686.1| hypothetical protein [Pongo abelii]
gi|67967783|dbj|BAE00374.1| unnamed protein product [Macaca fascicularis]
gi|77415321|gb|AAI05973.1| SUB1 homolog (S. cerevisiae) [Homo sapiens]
gi|90076378|dbj|BAE87869.1| unnamed protein product [Macaca fascicularis]
gi|90085497|dbj|BAE91489.1| unnamed protein product [Macaca fascicularis]
gi|119631198|gb|EAX10793.1| SUB1 homolog (S. cerevisiae), isoform CRA_a [Homo sapiens]
gi|119631199|gb|EAX10794.1| SUB1 homolog (S. cerevisiae), isoform CRA_a [Homo sapiens]
gi|119631200|gb|EAX10795.1| SUB1 homolog (S. cerevisiae), isoform CRA_a [Homo sapiens]
gi|119631201|gb|EAX10796.1| SUB1 homolog (S. cerevisiae), isoform CRA_a [Homo sapiens]
gi|168277570|dbj|BAG10763.1| activated RNA polymerase II transcriptional coactivator p15
[synthetic construct]
gi|189053075|dbj|BAG34697.1| unnamed protein product [Homo sapiens]
gi|383410603|gb|AFH28515.1| activated RNA polymerase II transcriptional coactivator p15 [Macaca
mulatta]
gi|384944054|gb|AFI35632.1| activated RNA polymerase II transcriptional coactivator p15 [Macaca
mulatta]
gi|387540984|gb|AFJ71119.1| activated RNA polymerase II transcriptional coactivator p15 [Macaca
mulatta]
gi|410209598|gb|JAA02018.1| SUB1 homolog [Pan troglodytes]
gi|410256770|gb|JAA16352.1| SUB1 homolog [Pan troglodytes]
gi|410256772|gb|JAA16353.1| SUB1 homolog [Pan troglodytes]
gi|410296826|gb|JAA27013.1| SUB1 homolog [Pan troglodytes]
gi|410332337|gb|JAA35115.1| SUB1 homolog [Pan troglodytes]
gi|444725580|gb|ELW66143.1| Activated RNA polymerase II transcriptional coactivator p15 [Tupaia
chinensis]
Length = 127
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 60 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD 119
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 120 IDDAVRKL 127
>gi|332251660|ref|XP_003274964.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 [Nomascus leucogenys]
Length = 127
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRR-DGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 60 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD 119
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 120 IDDAVRKL 127
>gi|114600763|ref|XP_001154452.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 isoform 2 [Pan troglodytes]
gi|397495431|ref|XP_003818559.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15 isoform 1 [Pan paniscus]
Length = 153
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 86 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD 145
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 146 IDDAVRKL 153
>gi|55168272|gb|AAV44138.1| hypothetcial protein [Oryza sativa Japonica Group]
Length = 596
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
F+G NY+ W ++ L L ++ +V P P S EE + +AA D
Sbjct: 343 FDGSNYKRWKARVLLWLTAMQCLFVSRGKMPK----PPLSPEEEAKFEAA------DCLF 392
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKS 311
C +++ L+D++ Y K +W+ L+ + + G++ ++++ +++M D+ +
Sbjct: 393 C-GALISVLTDNIVDVY-MHMPLGKNMWDALEAKFGLSDAGSELYIMEQFYDYKMVDDHT 450
Query: 312 V-FEQALELN--KIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLM-RMEYLTFTM 367
V + LE N ++ D VA G I++KLP S DF L + + + T
Sbjct: 451 VMLAKELENNNCELPDKFVAEG-----------IIAKLPPSCSDFATSLKHKRQGFSVTD 499
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNF 399
L+ + EE+ R+ + + K +E N
Sbjct: 500 LIGFLGVEEKGRAKDNR---GKVIEGGSTANL 528
>gi|52345648|ref|NP_001004871.1| SUB1 homolog [Xenopus (Silurana) tropicalis]
gi|49670390|gb|AAH75111.1| activated RNA polymerase II transcription cofactor 4 [Xenopus
(Silurana) tropicalis]
gi|89273971|emb|CAJ83635.1| activated RNA polymerase II transcription cofactor 4 [Xenopus
(Silurana) tropicalis]
Length = 128
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 102 RTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
R V++++FKG+ + +REYF + G++ P KGI+L EQW + + ID+A+ K+
Sbjct: 71 RYVSVRDFKGKVLIDVREYFMDQAGEMKPGRKGISLNPEQWNQLKEQMSDIDDAIRKL 128
>gi|380799109|gb|AFE71430.1| activated RNA polymerase II transcriptional coactivator p15,
partial [Macaca mulatta]
gi|380799111|gb|AFE71431.1| activated RNA polymerase II transcriptional coactivator p15,
partial [Macaca mulatta]
gi|380799113|gb|AFE71432.1| activated RNA polymerase II transcriptional coactivator p15,
partial [Macaca mulatta]
Length = 124
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 57 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD 116
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 117 IDDAVRKL 124
>gi|440796525|gb|ELR17634.1| RNA polymerase II transcriptional coactivator, putative
[Acanthamoeba castellanii str. Neff]
Length = 124
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVK 157
+ +KR V + +F+ + + IREY+ +DG+L+P KGI+L +QW+ + +D A+ K
Sbjct: 65 IGSKRRVTVSKFRNQLKIDIREYYEKDGELLPGRKGISLNEQQWQNLKDIISEVDAALGK 124
>gi|255935915|ref|XP_002558984.1| Pc13g05500 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583604|emb|CAP91619.1| Pc13g05500 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1112
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 86 RINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFS 145
+ + +GD ++S R V I F+G+ V++REY+ +DG+ +P KGI++ +Q+ A
Sbjct: 995 KTDSNGDRY-WEISKMRRVTISSFRGKTQVNVREYYEKDGQELPGKKGISMPVDQFAAIV 1053
Query: 146 KSLPAIDEAV 155
LP I+EA+
Sbjct: 1054 SLLPEIEEAL 1063
>gi|50262342|gb|AAT72821.1| activated RNA polymerase II transcription cofactor 4 [Homo sapiens]
Length = 73
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 6 DDNMFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISD 65
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 66 IDDAVRKL 73
>gi|449466430|ref|XP_004150929.1| PREDICTED: uncharacterized protein LOC101213227 [Cucumis sativus]
Length = 513
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 8/198 (4%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
+ NG NY W + +L + +VLT+ C + P +++ +R A +W+ N
Sbjct: 13 KLNGDNYAAWKSNLNTILVVDDLRFVLTEEC---SQNPASNANRTSR--DAYDRWIKANE 67
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
R +IL +SD L ++ + ++AKE+ + L+ ++ E+ + VK +M +
Sbjct: 68 KARVYILASMSDVLAKKH-ESLATAKEIMDSLRGMFGPPEWSLRHEAVKYIYTKRMKEGT 126
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIK--LMRMEYLTFTML 368
SV E L++ + G I E VS IL LP S+ F L ++E+ T+L
Sbjct: 127 SVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFNLTTLL 186
Query: 369 MDHIKAEEESRSHNKQEE 386
+ + + + KQ E
Sbjct: 187 NELQRFQNLTMGKGKQVE 204
>gi|417407921|gb|JAA50553.1| Putative activated rna polymerase ii transcriptional coactivator
p15-like protein, partial [Desmodus rotundus]
Length = 130
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRR-DGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 63 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD 122
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 123 IDDAVRKL 130
>gi|380011731|ref|XP_003689951.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Apis florea]
Length = 119
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIRE-YFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
+ L N R +++++FKG+ +V IRE Y+ ++ L P KGI L QW+ + +D+
Sbjct: 54 VWDLGNNRQISVRDFKGKLYVDIREMYYDKEANLKPGKKGICLNVTQWKKLLSVMDDVDK 113
Query: 154 AV 155
AV
Sbjct: 114 AV 115
>gi|108864385|gb|ABG22485.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1132
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQ 315
IL+ L D L Y T AKELW+ L + + ++++ +++M D +SV EQ
Sbjct: 89 ILSVLGDRLVEVYMHMTD-AKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVVEQ 147
Query: 316 ALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
A E+ +A + ++ + F V I++KLP SW+ F
Sbjct: 148 AHEIQTMAKELELLKCVLPDKFVVGCIIAKLPPSWRSF 185
>gi|281342399|gb|EFB17983.1| hypothetical protein PANDA_008635 [Ailuropoda melanoleuca]
Length = 104
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 37 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD 96
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 97 IDDAVRKL 104
>gi|440903684|gb|ELR54316.1| Activated RNA polymerase II transcriptional coactivator p15,
partial [Bos grunniens mutus]
Length = 104
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 37 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDAEGEMKPGRKGISLNPEQWSQLKEQISD 96
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 97 IDDAVRKL 104
>gi|291241408|ref|XP_002740604.1| PREDICTED: RNA polymerase II transcriptional coactivator,
putative-like [Saccoglossus kowalevskii]
Length = 183
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 24/157 (15%)
Query: 15 EVLKNSDMEEMTEFKVRVEASERLGIDL-SDANHKRFIRGVVESFLLSTTESTDN----- 68
+V+ +S M E R + +R I+L SD + R V S +T+ES +
Sbjct: 38 DVVTSSPMYEQGNMTSRPK--KRRAINLASDGSS----RSTVNSLATTTSESMHSSTGEC 91
Query: 69 --RIEPDLEVEEQRAQIGKRINDDGDSIICKL---SNKRTVAIQEFKGRAFVSIREYFRR 123
++ PD+ ++ I G++I +L S V I F+G+ +V IREY+
Sbjct: 92 SKKVAPDVSAMAAKSST---IAPRGENIFTRLICTSKCLYVTINSFRGKRYVHIREYY-- 146
Query: 124 DGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQS 160
+G PT +G+ALT EQ+ F + LP I+ + K ++
Sbjct: 147 NG--YPTKRGVALTMEQYNNFIEILPQINSVIRKQKT 181
>gi|346472519|gb|AEO36104.1| hypothetical protein [Amblyomma maculatum]
Length = 114
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDG-KLVPTAKGIALTSEQWRAFSK 146
++DG +I K KR V+++EFKGR V IREY+ L P KGI L +QW A
Sbjct: 46 DEDGKFMIGK---KRYVSVREFKGRVMVDIREYYEDSNCDLKPGKKGICLQLDQWNALKN 102
Query: 147 SLPAIDEAVVK 157
+ ID A+ K
Sbjct: 103 QIDDIDAAIRK 113
>gi|351694577|gb|EHA97495.1| Activated RNA polymerase II transcriptional coactivator p15
[Heterocephalus glaber]
Length = 149
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRR-DGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 82 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD 141
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 142 IDDAVRKL 149
>gi|77553336|gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1357
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 108/274 (39%), Gaps = 61/274 (22%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S +E T+ +A++
Sbjct: 108 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPKEETKFEASD------- 156
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ +FG + + Y+ Q +D
Sbjct: 157 CLFRGALISVLADNIVDVY-MHMPSGKDMWDA-----LEAKFGVSDAGSELYVMEQFYDY 210
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTM 367
K+ D VA G I++KLP SW DF L R E+ +
Sbjct: 211 -----------KMPDKFVAGG-----------IIAKLPPSWSDFATSLKHKRQEF-SVPD 247
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV------ 421
L+ + EE++R+++ + K VE + N + + +
Sbjct: 248 LIGSLGVEEKARANDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFK 304
Query: 422 ----------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 305 KKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 338
>gi|167384020|ref|XP_001736781.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900717|gb|EDR26966.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 143
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAI 151
D ++ KR V + +FKG ++ IRE++ RDG+L P KGI+L ++ F K++ I
Sbjct: 79 DDKYVQIGEKRYVRLNQFKGTKYIDIREFYERDGELKPGQKGISLKDYEFEEFVKNIEKI 138
>gi|451853477|gb|EMD66771.1| hypothetical protein COCSADRAFT_35260 [Cochliobolus sativus ND90Pr]
Length = 171
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 86 RINDDGDSIIC-KLSNKRTVAIQEFKGRAFVSIREYFRRD-GKLVPTAKGIALTSEQWRA 143
+ +D+GD+ + S KR + +F FVSIREY+ D G+ P KGI+L+ +Q+ A
Sbjct: 53 KTDDNGDAFVALNSSGKRRATVSDFNKNTFVSIREYYVTDTGETKPGKKGISLSIDQYNA 112
Query: 144 FSKSLPAIDEAVVKMQSK-LRSESSGE 169
+ P I+ A+ K K +R + G+
Sbjct: 113 LLAAAPLIESALAKKDIKVIRPDYDGD 139
>gi|222641374|gb|EEE69506.1| hypothetical protein OsJ_28953 [Oryza sativa Japonica Group]
Length = 214
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 274 SAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMI 333
S K++W+ L+ + + G++ ++++ +++M D++SV EQA E+ +A + +
Sbjct: 5 SGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDDRSVVEQAHEIQMLAKELENNNCEL 64
Query: 334 YENFHVSVILSKLPLSWKDFC--IKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFV 391
+ F V I++KLP W DF +K R E+ + + L+ + EE++R+ + + + +
Sbjct: 65 PDKFVVGGIIAKLP-PWSDFATFLKHKRQEF-SVSDLIGFLGVEEKARAKDNRGKKVEGG 122
Query: 392 ELSPAVNFGPRMREMSKKRRESEMDSKTVV------------CYNCRKKGHVAKHCHNKR 439
+ V P +KK T C+ C K H AK+C ++
Sbjct: 123 SSAIMVQKNPHASHNNKKVMPDVKPKATTNFKKKGKGKAKGDCFVCGKSRHWAKYCPERK 182
>gi|193606183|ref|XP_001948183.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Acyrthosiphon pisum]
Length = 113
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVK 157
L R V ++EF+G+ F+ IRE++ ++G+ +P KGI+L+ QW + + I ++V K
Sbjct: 52 LDKNRFVKVREFRGKLFIDIREFYEKNGETLPGKKGISLSVGQWNKLKEQIDDIQKSVEK 111
Query: 158 M 158
+
Sbjct: 112 L 112
>gi|48475173|gb|AAT44242.1| putative ubiquitin carrier protein [Oryza sativa Japonica Group]
Length = 974
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 44/252 (17%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND-N 249
+F G +++ + L L +K +V TD + + + A ++K ++
Sbjct: 12 KFTGVHFKRRHISVTLWLTAMKCFWVSTD-------------KSMGVLNADQQKEFDEAT 58
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ +IL+ L D L Y T + +E +Y+ E+F +++M D
Sbjct: 59 TLFVGYILSVLGDRLVEVYMHMTDA-----KEFNDLYIMEQFH----------DYKMVDN 103
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTM 367
+SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY +
Sbjct: 104 RSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRGFGTALKHKRQEY-SVEG 162
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRK 427
L+ + EE++R + + + G D +T C+ C +
Sbjct: 163 LIASLDVEEKAREKDAASKG----------DGGQSTANKKNNNNNPNQDERT--CFVCGQ 210
Query: 428 KGHVAKHCHNKR 439
GH+A+ C ++
Sbjct: 211 PGHLARKCPQRK 222
>gi|55168311|gb|AAV44177.1| hypothetcial protein [Oryza sativa Japonica Group]
Length = 602
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
F+G NY+ W ++ L L ++ +V P P S EE + +AA+ +
Sbjct: 349 FDGSNYKRWKARVLLWLTAMQCLFVSRGKMPK----PPLSPEEEAKFEAADCLFCG---- 400
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKS 311
+++ L+D++ Y K +W+ L+ + + G++ ++++ +++M D+ +
Sbjct: 401 ---ALISVLTDNIVDVY-MHMPLGKNMWDALEAKFGLSDAGSELYIMEQFYDYKMVDDHT 456
Query: 312 V-FEQALELN--KIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLM-RMEYLTFTM 367
V + LE N ++ D VA G I++KLP S DF L + + + T
Sbjct: 457 VMLAKELENNNCELPDKFVAEG-----------IIAKLPPSCSDFATSLKHKRQGFSVTD 505
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNF 399
L+ + EE+ R+ + + K +E N
Sbjct: 506 LIGFLGVEEKGRAKDNR---GKVIEGGSTANL 534
>gi|16905177|gb|AAL31047.1|AC078893_10 putative polyprotein [Oryza sativa Japonica Group]
Length = 866
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 14/131 (10%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EFQMFDEK 310
IL+ L D L Y T AKELW+ L + +FG + YI +++M D +
Sbjct: 34 ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDYKMADNR 87
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTML 368
SV EQA E+ +A ++ + F I++KLP SW+ F +K R EY + L
Sbjct: 88 SVVEQAHEIQTMAKEFELLKCVLPDKFVDGCIIAKLPPSWRGFGTALKHKRQEY-SVEGL 146
Query: 369 MDHIKAEEESR 379
+ + EE++R
Sbjct: 147 IASLDVEEKAR 157
>gi|268537306|ref|XP_002633789.1| Hypothetical protein CBG03481 [Caenorhabditis briggsae]
Length = 116
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 71 EPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLV 128
EP+ + ++ G+ + DG+ + ++ N R + +FKG+ +V+IREY+ + K+
Sbjct: 31 EPEQKKAKKEEATGRLKDSDGNEMF-EIGNLRYATVSKFKGKEYVNIREYYIDKETQKMQ 89
Query: 129 PTAKGIALTSEQWRAFSKSLPAIDEAV 155
P+ KGI+L+ QW +P ID+ +
Sbjct: 90 PSRKGISLSKAQWANLKDLIPEIDKKL 116
>gi|302799314|ref|XP_002981416.1| hypothetical protein SELMODRAFT_114406 [Selaginella moellendorffii]
gi|300150956|gb|EFJ17604.1| hypothetical protein SELMODRAFT_114406 [Selaginella moellendorffii]
Length = 62
Score = 52.4 bits (124), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 40/61 (65%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVK 157
+S R V++++++G+ V IREY+ + G+ +P KGI+LT +QW + + ID AV +
Sbjct: 1 ISKNRKVSVRKWRGQVLVDIREYWYKGGECLPGKKGISLTMDQWNVLQEHVKQIDSAVQR 60
Query: 158 M 158
+
Sbjct: 61 V 61
>gi|195433729|ref|XP_002064860.1| GK15158 [Drosophila willistoni]
gi|194160945|gb|EDW75846.1| GK15158 [Drosophila willistoni]
Length = 113
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 102 RTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVK 157
R V I EF+GR V IRE++ ++G+++P KGI+L+ +QW+ + I +AV K
Sbjct: 58 RQVRINEFRGRKMVDIREHYEKNGEILPGKKGISLSIQQWKKLLELADEITQAVEK 113
>gi|62734435|gb|AAX96544.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|77550433|gb|ABA93230.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1321
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 114/272 (41%), Gaps = 41/272 (15%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 166 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 214
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 215 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 273
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLM 369
+SV EQA E+ +A + + + F I++KL K R E+ + L+
Sbjct: 274 RSVVEQAHEIQMLAKELENNNRELPDKFVAGGIIAKL---------KHKRQEF-SVPDLI 323
Query: 370 DHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV-------- 421
+ EE++R+ + + K VE + N + + +
Sbjct: 324 GSLGVEEKARAKDVR---GKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAATNFKKK 380
Query: 422 --------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 381 GKGKAKGDCFVCGKSGHWAKDCPKRKDRKSAN 412
>gi|148230138|ref|NP_001084564.1| SUB1 homolog [Xenopus laevis]
gi|46250135|gb|AAH68824.1| MGC81442 protein [Xenopus laevis]
Length = 128
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
+ ++ R V +++FKG+ + +REYF + G++ P KGI+L EQW + + ID+
Sbjct: 64 MFQIGKMRYVTVRDFKGKVLIDVREYFMDQAGEMKPGRKGISLNPEQWNQLKEQMSDIDD 123
Query: 154 AVVKM 158
A+ K+
Sbjct: 124 AIRKL 128
>gi|167391894|ref|XP_001739938.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896181|gb|EDR23674.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 143
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAI 151
D ++ KR V + +FKG ++ IRE++ RDG+L P KGI+L ++ F K++ I
Sbjct: 79 DDKYVQIGEKRYVRLNQFKGTKYIDIREFYERDGELKPGQKGISLKDYEFEEFVKNIEKI 138
>gi|219884633|gb|ACL52691.1| unknown [Zea mays]
Length = 379
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAA-ERKWLNDNN 250
F+GKN+ +W ++EL L + C A+ + + E K+ ++
Sbjct: 176 FDGKNFLIWKAKMELWLTAMS--------------CFHAAEGKPANLPPEDEAKFKAEDK 221
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
+ R +++ L Y + KELW+ L + + G++ +++ +++M + +
Sbjct: 222 LFRGAVISALDTKFQKSYI-ILPTGKELWDALVGKFGVTDAGSELYLMEQLYDYKMVENR 280
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL 357
SV EQA E +A + + + F V I++KLP SWKDF L
Sbjct: 281 SVVEQAHEFQALAKELELFPCPLPDKFVVGGIIAKLPPSWKDFATSL 327
>gi|355749845|gb|EHH54183.1| SUB1-like protein [Macaca fascicularis]
Length = 96
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 94 IICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAFSKSLPAID 152
+ ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + + ID
Sbjct: 31 VAPQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDID 90
Query: 153 EAVVKM 158
+AV K+
Sbjct: 91 DAVRKL 96
>gi|354483046|ref|XP_003503706.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Cricetulus griseus]
Length = 127
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 60 DDNMFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISD 119
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 120 IDDAVRKL 127
>gi|57526804|ref|NP_001009618.1| activated RNA polymerase II transcriptional coactivator p15 [Rattus
norvegicus]
gi|84028273|sp|Q63396.3|TCP4_RAT RecName: Full=Activated RNA polymerase II transcriptional
coactivator p15; AltName: Full=Positive cofactor 4;
Short=PC4; AltName: Full=SUB1 homolog; AltName: Full=p14
gi|56789272|gb|AAH88346.1| SUB1 homolog (S. cerevisiae) [Rattus norvegicus]
gi|149027299|gb|EDL82966.1| rCG23681, isoform CRA_a [Rattus norvegicus]
gi|149027300|gb|EDL82967.1| rCG23681, isoform CRA_a [Rattus norvegicus]
gi|149027301|gb|EDL82968.1| rCG23681, isoform CRA_a [Rattus norvegicus]
Length = 127
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 60 DDNMFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISD 119
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 120 IDDAVRKL 127
>gi|205854|gb|AAA41758.1| pR-ET2 encoded oncodevelopmental protein (putative); putative,
partial [Rattus norvegicus]
Length = 119
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 52 DDNMFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPRRKGISLNMEQWSQLKEQISD 111
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 112 IDDAVRKL 119
>gi|66472668|ref|NP_001018376.1| activated RNA polymerase II transcriptional coactivator p15 [Danio
rerio]
gi|63100558|gb|AAH95096.1| Zgc:109973 [Danio rerio]
gi|182891904|gb|AAI65490.1| Zgc:109973 protein [Danio rerio]
Length = 123
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
+ ++ R V++++FKG+ + IREY+ ++G++ P KGI+L EQW + + ID+
Sbjct: 59 MFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKEQISEIDD 118
Query: 154 AV 155
AV
Sbjct: 119 AV 120
>gi|125561583|gb|EAZ07031.1| hypothetical protein OsI_29279 [Oryza sativa Indica Group]
Length = 183
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 14/147 (9%)
Query: 177 SMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVT 236
S +P L P G Y W + + L L+ L +AYVL++ P E
Sbjct: 3 SSPTPAPLLPVA-PLDGGGGYLRWKESVLLRLRTLDLAYVLSEHQP-----------EDG 50
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRS 296
R +A++KW D+ +CR HIL LSD L Y+ ++A + +D +
Sbjct: 51 RSDSAKKKWARDDELCRGHILATLSDRLLPDYAHHATAAAAWRALARTYDMDGKL--PNL 108
Query: 297 QVKKYIEFQMFDEKSVFEQALELNKIA 323
+ ++ ++ D + V EQ L +
Sbjct: 109 PLDRFFAYRFVDGEPVLEQLAHLEAMG 135
>gi|6755364|ref|NP_035424.1| activated RNA polymerase II transcriptional coactivator p15 [Mus
musculus]
gi|129392|sp|P11031.3|TCP4_MOUSE RecName: Full=Activated RNA polymerase II transcriptional
coactivator p15; AltName: Full=Positive cofactor 4;
Short=PC4; AltName: Full=SUB1 homolog; AltName:
Full=Single-stranded DNA-binding protein p9; AltName:
Full=p14
gi|309120|gb|AAA37317.1| single stranded DNA binding protein p9 precursor [Mus musculus]
gi|15012118|gb|AAH10967.1| SUB1 homolog (S. cerevisiae) [Mus musculus]
gi|26339286|dbj|BAC33314.1| unnamed protein product [Mus musculus]
gi|26339958|dbj|BAC33642.1| unnamed protein product [Mus musculus]
gi|74152195|dbj|BAE32384.1| unnamed protein product [Mus musculus]
gi|74198846|dbj|BAE30649.1| unnamed protein product [Mus musculus]
gi|74204898|dbj|BAE20946.1| unnamed protein product [Mus musculus]
gi|148671326|gb|EDL03273.1| mCG7211, isoform CRA_a [Mus musculus]
gi|148671327|gb|EDL03274.1| mCG7211, isoform CRA_a [Mus musculus]
Length = 127
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 60 DDNMFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISD 119
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 120 IDDAVRKL 127
>gi|110289247|gb|AAP54258.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 879
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 14/131 (10%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EFQMFDEK 310
IL+ L D L Y T AKELW+ L + +FG + YI +++M D +
Sbjct: 34 ILSVLGDRLVEVYMHMTD-AKELWDAL-----NTKFGATDASNDLYIMEQFHDYKMADNR 87
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTML 368
SV EQA E+ +A ++ + F I++KLP SW+ F +K R EY + L
Sbjct: 88 SVVEQAHEIQTMAKEFELLKCVLPDKFVDGCIIAKLPPSWRGFGTALKHKRQEY-SVEGL 146
Query: 369 MDHIKAEEESR 379
+ + EE++R
Sbjct: 147 IASLDVEEKAR 157
>gi|355731636|gb|AES10440.1| Activated RNA polymerase II transcriptional coactivator p15
[Mustela putorius furo]
Length = 144
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 77 DDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD 136
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 137 IDDAVRKL 144
>gi|313226248|emb|CBY21392.1| unnamed protein product [Oikopleura dioica]
gi|313241412|emb|CBY33681.1| unnamed protein product [Oikopleura dioica]
Length = 244
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 93 SIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAID 152
S + + KR + EFKGR +++IREY+ + PT KG+AL +WR +D
Sbjct: 110 SSMTLIGPKRYMGPMEFKGRHYLNIREYYEDSTGMKPTKKGVALNQGEWRTLKSMFYDVD 169
Query: 153 EAVVKMQS 160
E ++ ++
Sbjct: 170 EKIINAEA 177
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 98 LSNKRTVAIQEFKGR-AFVSIREYFRRDGKLVPTAKGIALTSEQW 141
LS+K+ + + +FKG+ + +RE++ +DG+ +P KGIAL +Q+
Sbjct: 185 LSDKKQIRVTKFKGKFLLIDVREFYHKDGEKMPGKKGIALKQDQY 229
>gi|74226891|dbj|BAE27090.1| unnamed protein product [Mus musculus]
Length = 127
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + +
Sbjct: 60 DDNMFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISD 119
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 120 IDDAVRKL 127
>gi|83775248|dbj|BAE65371.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 216
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 60 LSTTESTDNRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIRE 119
L T+ T +R + ++R ++ +GD ++S R V I F+G+ V+IRE
Sbjct: 23 LKRTKFTSSRSGAACDSSKRRTGATGNVDANGDHY-WEISKMRRVTISSFRGKTLVNIRE 81
Query: 120 YFRRDGKLVPTAKGIALTSEQWRAFSKSLPAID 152
Y+ +DG+ +P KGI+L +Q+ + LP I+
Sbjct: 82 YYEKDGQELPGKKGISLPIDQFASLVTLLPDIE 114
>gi|148683934|gb|EDL15881.1| mCG49987 [Mus musculus]
Length = 65
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
+ ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + + ID+
Sbjct: 1 MFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISDIDD 60
Query: 154 AVVKM 158
AV K+
Sbjct: 61 AVRKL 65
>gi|156550787|ref|XP_001606951.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Nasonia vitripennis]
Length = 150
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 98 LSNKRTVAIQEFKGRAFVSIRE-YFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
L + V ++ FK + FV IRE Y +DG++ P KG+ L E W++F K + +D+AV
Sbjct: 87 LGGNKHVTVRSFKNKWFVDIREMYMDKDGEMKPGRKGVCLNMENWKSFMKVVEDVDKAV 145
>gi|115476452|ref|NP_001061822.1| Os08g0421700 [Oryza sativa Japonica Group]
gi|25553722|dbj|BAC24955.1| unknown protein [Oryza sativa Japonica Group]
gi|113623791|dbj|BAF23736.1| Os08g0421700 [Oryza sativa Japonica Group]
gi|125603445|gb|EAZ42770.1| hypothetical protein OsJ_27350 [Oryza sativa Japonica Group]
gi|215741516|dbj|BAG98011.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 102/268 (38%), Gaps = 30/268 (11%)
Query: 177 SMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVT 236
S +P L P G Y W + + L L+ L +AYVL++ P E
Sbjct: 3 SSPTPAPLLPVA-PLDGGGGYLRWKESVLLRLRTLDLAYVLSEHQP-----------EDG 50
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRS 296
R +A++K D+ +CR HIL LSD L Y+ ++A + +D +
Sbjct: 51 RSDSAKKKRARDDELCRGHILATLSDRLLPDYAHHATAAAAWRALARTYDMDGKL--PNL 108
Query: 297 QVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIK 356
+ ++ ++ D + V EQ L + AG + + ++ KLP + I
Sbjct: 109 PLDRFFAYRFVDGEPVLEQLAHLEAMG----VAGKLDDRTMY-GLVHQKLPPALVK-AIA 162
Query: 357 LMRMEYLTFTMLMDHI----KAEEESRSHN---KQEEPSKFVELSPAVNFGPRMREMSKK 409
L Y MDHI + EE R + E + +
Sbjct: 163 LASPPYPDPPS-MDHIWDTARLEERMRLCGEIRRGEHTQDKEDDDDQGGGDYPDEDHRSP 221
Query: 410 RRESEMDSKTVVCYNCRKKGHVAKHCHN 437
+R+ D CYNC + GH+A+ C
Sbjct: 222 KRKRRYDRGP--CYNCGEPGHIARDCRG 247
>gi|226504158|ref|NP_001152660.1| LOC100286301 [Zea mays]
gi|195658657|gb|ACG48796.1| RNA polymerase II transcriptional coactivator KIWI [Zea mays]
gi|413937233|gb|AFW71784.1| RNA polymerase II transcriptional coactivator KIWI [Zea mays]
Length = 106
Score = 51.6 bits (122), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 71 EPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPT 130
EP + + R +DG +++ ++S + V+++ +KGR FV +RE++ +DGK +PT
Sbjct: 16 EPAAKRQAARDDGPSESAEDG-TVVAEISKNKKVSVRSWKGRVFVDLREFYFKDGKTLPT 74
Query: 131 AKGIALTSEQWRAFSKSLPAIDEAVVKMQS 160
KGI+L +Q+ K A A++ + S
Sbjct: 75 RKGISLQLDQFFFAVKCQDAHTYAMITISS 104
>gi|396500911|ref|XP_003845843.1| hypothetical protein LEMA_P011510.1 [Leptosphaeria maculans JN3]
gi|312222424|emb|CBY02364.1| hypothetical protein LEMA_P011510.1 [Leptosphaeria maculans JN3]
Length = 175
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRD-GKLVPTAKGIALTSEQWRAFSKS 147
D D I S KR + EFK +SIREY+ D G+L P KGI+LT +Q++ S
Sbjct: 65 DGNDYIALNASGKRRATVSEFKDNTLISIREYWTNDSGELKPGKKGISLTIDQYQTLLAS 124
Query: 148 LPAIDEAVV 156
P + EAV+
Sbjct: 125 APLL-EAVL 132
>gi|357486073|ref|XP_003613324.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
gi|355514659|gb|AES96282.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
Length = 1104
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 116/264 (43%), Gaps = 32/264 (12%)
Query: 188 ELHRFNGKN-YRVWAQQIELLLKQLKVAYVLTDPCPI-VTLCPQASSEEVTRVKAAERKW 245
++ +F G N + +W ++E +L Q K L + VT+ +E V + ++A
Sbjct: 6 DIEKFTGDNDFGLWKVKMEAVLIQQKCEKALKGEGSLPVTMSQAEKTEMVDKARSA---- 61
Query: 246 LNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQ 305
++ L D + + +K ++A +W +L+ +Y+ + ++ ++ F+
Sbjct: 62 ----------VVLCLGDKVLREVAKEATAAS-IWAKLESLYMTKSLAHRQFLKQQLYSFR 110
Query: 306 MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTF 365
M + K++ EQ E NKI D + + + + ++L LP S++ F ++ + T
Sbjct: 111 MVESKAIMEQLTEFNKILDDLENIEVQLEDEDKAILLLCALPKSFESFKDTMLYGKEGTV 170
Query: 366 TM--LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCY 423
T+ + ++ +E ++S + E + ++ G R S + E C+
Sbjct: 171 TLEEVQAALRTKELTKSKDLTHEYGDGLSVTRGNGGGRGNRRKSGNKSRFE-------CF 223
Query: 424 NCRKKGHVAKHCHNKRLHQEINDN 447
NC K GH K C EIN N
Sbjct: 224 NCHKMGHFKKDC------PEINGN 241
>gi|344244825|gb|EGW00929.1| Activated RNA polymerase II transcriptional coactivator p15
[Cricetulus griseus]
Length = 59
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 102 RTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
R V++++FKG+ + IREY+ +G++ P KGI+L EQW + + ID+AV K+
Sbjct: 2 RYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISDIDDAVRKL 59
>gi|14719283|gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays]
gi|168251067|gb|ACA21850.1| Fourf gag/pol protein [Zea mays]
Length = 1279
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 242 ERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKY 301
E K+ ++N+ R +++ L Y + KELW+ L + + G++ +++
Sbjct: 26 EAKFKAEDNLFRGAVISALDTKFQKSYII-LPTGKELWDALVGKFGVTDAGSELYLMEQL 84
Query: 302 IEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MR 359
+++M + +SV EQA E +A + + + F I++KLP SWKDF L R
Sbjct: 85 YDYKMVENRSVVEQAHEFQALAKELELFPCPLPDKFVAGGIIAKLPPSWKDFATSLKHKR 144
Query: 360 MEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPA-----VNFGPRMREMSKKRRESE 414
E+ L+ + EE +R+ ++ K VE S A NF R K + + E
Sbjct: 145 QEF-NVEELIGTLDVEERART----KDSGKGVETSTANVVQKRNF--RKFNKKKNQNKPE 197
Query: 415 MDSKTV----------------VCYNCRKKGHVAKHCHNKRLHQE 443
+K V C+ C H A+ C +++ Q+
Sbjct: 198 NANKPVHTAQFKKKNNNNKGKGGCFVCGSDQHWARECPDRKFTQD 242
>gi|328909177|gb|AEB61256.1| activated RNA polymerase II transcriptional coactivator p15-like
protein, partial [Equus caballus]
Length = 58
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 102 RTVAIQEFKGRAFVSIREYFRR-DGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
R V++++FKG+ + IREY+ +G++ P KGI+L EQW + + ID+AV K+
Sbjct: 1 RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 58
>gi|291223459|ref|XP_002731727.1| PREDICTED: conserved hypothetical protein-like [Saccoglossus
kowalevskii]
gi|291245197|ref|XP_002742477.1| PREDICTED: conserved hypothetical protein-like [Saccoglossus
kowalevskii]
Length = 183
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 17/119 (14%)
Query: 52 RGVVESFLLSTTEST-------DNRIEPDLEVEEQRAQIGKRINDDGDSIICKL---SNK 101
R V S +T+ES ++ PD+ ++ I G++I +L S
Sbjct: 70 RSTVNSLATTTSESMRSSTGECSKKVAPDVSAMGAKSST---IAPRGENIFTRLICSSKS 126
Query: 102 RTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQS 160
V I F+G+ +V IREY+ +G PT +G+ALT EQ+ F + LP I+ + K ++
Sbjct: 127 LYVTINSFRGKRYVHIREYY--NG--YPTKRGVALTMEQYNNFIEILPQINSVIRKQKT 181
>gi|38566588|gb|AAR24184.1| At2g04460 [Arabidopsis thaliana]
gi|40823945|gb|AAR92317.1| At2g04460 [Arabidopsis thaliana]
gi|51971565|dbj|BAD44447.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
gi|159507375|gb|ABW97710.1| putative signaling protein [Arabidopsis thaliana]
gi|159507378|gb|ABW97711.1| putative signaling protein [Arabidopsis thaliana]
Length = 148
Score = 51.2 bits (121), Expect = 0.001, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 189 LHRFNGK-NYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLN 247
L+ F+GK ++ W ++ L + + LT+ P V PQ ++ + W
Sbjct: 28 LYLFDGKAGFKTWQDKMHYYLVSINMERYLTEDPPTV---PQGTTN--VYAVGSMNTWAQ 82
Query: 248 DNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMF 307
+ C+ ILN L + Y+K SS K LW L+ Y +E G +R K++ F+M
Sbjct: 83 GDYCCKGLILNRLVHDRFGLYNKSKSS-KTLWLALENKYKTDESGRQRFSTTKFLNFKMV 141
Query: 308 DEKSVFE 314
D K + E
Sbjct: 142 DSKQIME 148
>gi|357129399|ref|XP_003566349.1| PREDICTED: uncharacterized protein LOC100838984 [Brachypodium
distachyon]
Length = 290
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 96/210 (45%), Gaps = 25/210 (11%)
Query: 175 ANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE 234
A SM P+ F G NY+ W + L + + + C + E
Sbjct: 41 AASMKPPV---------FEGVNYKRWRARAVLWFQTMSCYNAI---CGL---------PE 79
Query: 235 VTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTK 294
A E + + + +++ L D++ Y ++ K++W+ L+ + + G++
Sbjct: 80 GNHTPAEEEAFQKLDTTFKAALISILGDNIVDSYLS-FNNCKDMWDALERKFGVSDAGSE 138
Query: 295 RSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFC 354
+K++ +++M +++ + EQA E+ +A + ++ + F I++KLP SW+ F
Sbjct: 139 LYVMKQFYDYKMVEDRPIVEQAHEIQSLAKELEHFTCVLPDKFVAGGIIAKLPPSWRHFA 198
Query: 355 IKL--MRMEYLTFTMLMDHIKAEEESRSHN 382
L R E+ + T L+ + EE++R+ +
Sbjct: 199 TSLKHKRQEF-SVTNLIGTLDVEEKARAKD 227
>gi|324529837|gb|ADY49049.1| RNA polymerase II transcriptional coactivator [Ascaris suum]
Length = 128
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 79 QRAQIGKRI--NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGI 134
++A+ G ++ N DGD ++ +L R V ++ FKG+A + IREY+ + G++ P KGI
Sbjct: 46 KKAKEGPKLLKNSDGDEML-ELGKMRFVTVRSFKGKALIDIREYYQDKGSGEVKPGRKGI 104
Query: 135 ALTSEQWRAFSKSLPAIDE 153
+L+ EQ+ + IDE
Sbjct: 105 SLSREQYENLKRLTAEIDE 123
>gi|452004910|gb|EMD97366.1| hypothetical protein COCHEDRAFT_1220801 [Cochliobolus
heterostrophus C5]
Length = 173
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 86 RINDDGDSIIC-KLSNKRTVAIQEFKGRAFVSIREYFRRD-GKLVPTAKGIALTSEQWRA 143
+ +D+GD+ + S KR V + +F VSIREY+ D G+ P KGI+L+ +Q+ A
Sbjct: 53 KTDDNGDAFVALNSSGKRRVTVSDFNKNTLVSIREYYVTDTGETKPGKKGISLSIDQYNA 112
Query: 144 FSKSLPAIDEAVVKMQSKL 162
+ P I+ A+ K K+
Sbjct: 113 LLAAAPLIESALAKKDIKV 131
>gi|350636730|gb|EHA25088.1| hypothetical protein ASPNIDRAFT_185776 [Aspergillus niger ATCC
1015]
Length = 166
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 86 RINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFS 145
+++ +GD + ++S R V I F+G+ V+IREY+ +DG +P KGI+L +Q+ +
Sbjct: 48 KLDSNGD-LYWEISKARRVTISSFRGKTLVNIREYYEKDGHELPGKKGISLPIDQFSSLV 106
Query: 146 KSLPAID 152
LP I+
Sbjct: 107 SLLPHIE 113
>gi|426385036|ref|XP_004059044.1| PREDICTED: uncharacterized protein LOC101126279 [Gorilla gorilla
gorilla]
Length = 184
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 94 IICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAFSKSLPAID 152
+ ++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + + ID
Sbjct: 119 FLLQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDID 178
Query: 153 EAVVKM 158
+AV K+
Sbjct: 179 DAVRKL 184
>gi|363743663|ref|XP_001234815.2| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Gallus gallus]
Length = 126
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 72 PDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIRE-YFRRDGKLVPT 130
P E R + D + + ++ R V + F G+ V IRE Y ++G + P
Sbjct: 39 PKTEARPSRVAAKPQGRDSEEGGMFQIGKMRYVRVSCFNGKVLVDIREFYMDKEGDMKPG 98
Query: 131 AKGIALTSEQWRAFSKSLPAIDEAVVK 157
KGIAL++EQW + +P ID AV K
Sbjct: 99 RKGIALSAEQWNQLKEIIPEIDAAVRK 125
>gi|336384292|gb|EGO25440.1| hypothetical protein SERLADRAFT_465594 [Serpula lacrymans var.
lacrymans S7.9]
Length = 144
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVK 157
L K+ +++FKG FV +RE+F G+ P KGI+L EQW A ID +
Sbjct: 82 LGKKKRATVRKFKGAVFVDVREFFGNPGEEKPGKKGISLGLEQWEALKSGASTIDSLFTE 141
Query: 158 MQS 160
++S
Sbjct: 142 LKS 144
>gi|449527763|ref|XP_004170879.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like
[Cucumis sativus]
Length = 118
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 85 KRINDDGDSII-CKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQ 140
K+ +DD D I+ C+LS R V ++ ++G+ V IRE++ +DGK +P KGI+L+ +Q
Sbjct: 26 KKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ 82
>gi|440639764|gb|ELR09683.1| hypothetical protein GMDG_04169 [Geomyces destructans 20631-21]
Length = 169
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 100 NKRTVAIQEFKGRAFVSIREYFRRD-GKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
N R + I EFKG ++IREY++ G L+P KGI+L +Q++ +++P I+ A+ M
Sbjct: 70 NSRRIGISEFKGTRLINIREYYQNPAGDLLPGKKGISLPLDQYKVLLQAIPDINAALTAM 129
Query: 159 QSKLRS 164
+ S
Sbjct: 130 GETVES 135
>gi|262401111|gb|ACY66458.1| putative RNA polymerase II transcriptional coactivator [Scylla
paramamosain]
Length = 93
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 110 KGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
K + F+ IRE++ +DG+ +P KGI+L++ QW +P IDE V +M
Sbjct: 44 KNKLFIDIREFYEKDGEYLPGKKGISLSAIQWNKLKSVIPDIDEVVQEM 92
>gi|393217464|gb|EJD02953.1| PC4-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 154
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKS 147
N +G+ I L +R ++ FKG ++ IRE+F + L P KGI+LT EQW +
Sbjct: 85 NSEGEKYI-DLGKRRRATVRSFKGVPYIDIREFFGDEDDLKPGKKGISLTKEQWSELKAN 143
Query: 148 LPAIDEAVVKM 158
+ ID + K+
Sbjct: 144 MNTIDTLIEKL 154
>gi|195339124|ref|XP_002036171.1| GM16854 [Drosophila sechellia]
gi|195577498|ref|XP_002078607.1| GD23514 [Drosophila simulans]
gi|194130051|gb|EDW52094.1| GM16854 [Drosophila sechellia]
gi|194190616|gb|EDX04192.1| GD23514 [Drosophila simulans]
Length = 110
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 67 DNRIEPDLEVEEQRAQIGKRINDDGD--SIICKLSNKRTVAIQEFKGRAFVSIREYFRRD 124
D+RI+P + ++ ND G+ + L R V I EF+GR V IRE++ +
Sbjct: 18 DDRIKPASKKAKESDAPKSDPNDSGENGATTWTLEGLRQVRINEFRGRKSVDIREFYDKG 77
Query: 125 GKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
GK++P KGI+L+ QW+ + + A+
Sbjct: 78 GKILPGKKGISLSLIQWKKLLEVAEEVTRAI 108
>gi|32487396|emb|CAE05730.1| OSJNBb0017I01.10 [Oryza sativa Japonica Group]
Length = 701
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQ 315
IL+ L D Y + T AKELW+ L + + ++++ +++M +S+ EQ
Sbjct: 184 ILSVLGDRPVEVYMQMTD-AKELWDALNTKFGATDVSNDLYIMEQFHDYKMAGNRSIVEQ 242
Query: 316 ALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTMLMDHIK 373
A E+ +A + ++ + F I++KLP SW+ F +K R EY + L+ +
Sbjct: 243 AHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY-SVEGLIASLD 301
Query: 374 AEEESR 379
EE++R
Sbjct: 302 VEEKAR 307
>gi|402890988|ref|XP_003908747.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Papio anubis]
Length = 160
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 102 RTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQ 159
R V++++FKG+ + IREY+ +G++ P KGI L EQW + + ID+AV K++
Sbjct: 97 RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGIYLNPEQWSQLKEQISDIDDAVRKLK 155
>gi|119586031|gb|EAW65627.1| hCG17750 [Homo sapiens]
Length = 127
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKS 147
DD I K+ R V++ +FKG+ + REY+ +G++ P KGIAL EQW +
Sbjct: 60 DDNKFQIGKM---RYVSVGDFKGKVLIDTREYWMDPEGEMKPGRKGIALNPEQWSQLKEQ 116
Query: 148 LPAIDEAVVKM 158
+ ID+AV K+
Sbjct: 117 ISVIDDAVRKL 127
>gi|110288696|gb|ABB46939.2| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 1085
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 35/203 (17%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVL-----TDPCPIVTLCPQASSEEVTR---VKAAER 243
F+G N + + L QL VA +L D I+++ +S VTR + E
Sbjct: 35 FSGYNVSLLPFVLRFL--QLSVAVLLRSLIYVDAYSILSMLMLYTSSTVTRSTQITNEEA 92
Query: 244 KWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIE 303
K+ + + R +++ L+D + Y S K++W+ L+ + + G++ ++++ +
Sbjct: 93 KFEVADCLFRGALISVLADSIVDVY-MHMPSRKDMWDALQAKFRVSDAGSELYVMEQFYD 151
Query: 304 FQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRME 361
+ M D++SV EQ VA G I++KLP SW DF L R E
Sbjct: 152 YNMVDDRSVVEQ----------FVAGG-----------IIAKLPPSWSDFATSLKHKRQE 190
Query: 362 YLTFTMLMDHIKAEEESRSHNKQ 384
+ + T L+ + EE++R+ + +
Sbjct: 191 F-SVTDLIGSLGVEEKARAKDNR 212
>gi|195472945|ref|XP_002088758.1| GE18744 [Drosophila yakuba]
gi|194174859|gb|EDW88470.1| GE18744 [Drosophila yakuba]
Length = 110
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 67 DNRIEP-DLEVEEQRAQIGKRINDDGDSIIC-KLSNKRTVAIQEFKGRAFVSIREYFRRD 124
D+R +P + +E A R + GD+ L R V I EF+GR V IRE++ +
Sbjct: 18 DDRNKPASKKAKESAAPKSARRDSGGDNATTWTLEGLRQVRINEFRGRKMVDIREFYEKG 77
Query: 125 GKLVPTAKGIALTSEQWRAF 144
G+ +P KGI+L+ +QW+
Sbjct: 78 GETLPGKKGISLSVKQWKKL 97
>gi|194863061|ref|XP_001970257.1| GG10524 [Drosophila erecta]
gi|190662124|gb|EDV59316.1| GG10524 [Drosophila erecta]
Length = 110
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
D+ L R V I EF+GR V IRE++ + G+ +P KGI+L+ +QW+
Sbjct: 45 DTTTWTLEGLRQVRINEFRGRKMVDIREFYEKGGETLPGKKGISLSVKQWKKL 97
>gi|312074004|ref|XP_003139775.1| hypothetical protein LOAG_04190 [Loa loa]
gi|307765059|gb|EFO24293.1| hypothetical protein LOAG_04190 [Loa loa]
Length = 121
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 65 STDNRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF--R 122
++D I V++ ++ G N DG+ + +L R V ++ FKG+A + IREY+ +
Sbjct: 27 TSDESIIDKTPVKKGKSNDGGFKNADGEEMF-ELGKMRFVTVRSFKGKALIDIREYYQDK 85
Query: 123 RDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
G+L P KGI+L+ EQ++ + IDE +
Sbjct: 86 GSGELKPGRKGISLSGEQYQRLKAIMGDIDEKL 118
>gi|170053011|ref|XP_001862481.1| p31A [Culex quinquefasciatus]
gi|167873703|gb|EDS37086.1| p31A [Culex quinquefasciatus]
Length = 107
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVK 157
L + V ++EFK + +V IRE++ +DGK++P KG++L W+ + ++EA+ K
Sbjct: 47 LDKNKKVTVREFKNKVYVDIREFYEKDGKMLPGKKGVSLQVPMWKKLLEISDEVNEAIKK 106
Query: 158 M 158
Sbjct: 107 F 107
>gi|449474854|ref|XP_004154303.1| PREDICTED: uncharacterized protein LOC101214690, partial [Cucumis
sativus]
Length = 151
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV 238
+S ++L +E + NG NY W + +L + +VLT+ CP P +++ +R
Sbjct: 3 SSIVQLLASE--KLNGDNYAAWKSNLNTILVVDDLRFVLTEECP---QNPASNANRTSR- 56
Query: 239 KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
A +W+ N R +IL +SD L ++ + ++AKE+ + L+ ++ E+ + V
Sbjct: 57 -DAYDRWIKANEKARVYILASMSDVLAKKH-ESLATAKEIMDSLRGMFGQSEWSLRHEAV 114
Query: 299 KKYIEFQMFDEKSVFEQALEL 319
K +M + SV E L++
Sbjct: 115 KYIYTKRMKEGTSVREHVLDM 135
>gi|108864151|gb|ABA92101.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 923
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 257 LNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EFQMFDEKS 311
+ L D L Y T AKELW L + +FG + YI +++M D +S
Sbjct: 23 FDVLGDRLVEVYMHMTD-AKELWNAL-----NTKFGCTDASNDLYIMEQFHDYKMADNRS 76
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTMLM 369
V EQA E+ +A + ++ + F I++KLP SW+ F +K R EY + L+
Sbjct: 77 VVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFSTALKHKRQEY-SVEGLI 135
Query: 370 DHIKAEEESR 379
+ EE++R
Sbjct: 136 ASLDVEEKAR 145
>gi|403376683|gb|EJY88322.1| RNA polymerase II transcriptional coactivator KIWI [Oxytricha
trifallax]
Length = 393
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVK 157
LS K+ V ++ + G FV +RE+F + K +PT KG+ L + WRA + ID + +
Sbjct: 178 LSVKKKVQVKRYYGEVFVDLREFFIKGEKYLPTKKGVTLKMDHWRALKDLISTIDRTIDE 237
Query: 158 M 158
M
Sbjct: 238 M 238
>gi|402592960|gb|EJW86887.1| hypothetical protein WUBG_02199 [Wuchereria bancrofti]
Length = 122
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 76 VEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKG 133
V++ R G N DG+ + +L R V ++ FKG++ + IREY+ + G+L P KG
Sbjct: 39 VKKGRTNGGSFKNSDGEEMF-ELGKMRFVTVRSFKGKSLIDIREYYQDKGSGELKPGRKG 97
Query: 134 IALTSEQWRAFSKSLPAIDEAV 155
I+L+ EQ++ + IDE +
Sbjct: 98 ISLSEEQYQRLKAIMGDIDEKL 119
>gi|449445254|ref|XP_004140388.1| PREDICTED: uncharacterized protein LOC101215991 [Cucumis sativus]
Length = 518
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 10/192 (5%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV 238
+S ++L +E + N NY W + +L + +VLT+ CP P +++ +R
Sbjct: 3 SSIVQLLASE--KLNDDNYAAWKSNLNTILVVDDLRFVLTEECP---QNPASNANRTSR- 56
Query: 239 KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
A +W+ N +IL +SD L ++ + ++ KE+ + L+ ++ E+ + V
Sbjct: 57 -GAYDRWIKANEKAPVYILASMSDVLAKKH-ESLATTKEIMDSLRGMFGQPEWSLRHETV 114
Query: 299 KKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIK-- 356
K +M + SV E L++ + G I E VS IL LP S+ F
Sbjct: 115 KYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNSS 174
Query: 357 LMRMEYLTFTML 368
L ++E+ T+L
Sbjct: 175 LNKIEFNLTTLL 186
>gi|147805294|emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera]
Length = 565
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCP--IVTLCPQASSEEVTRVKAAERK 244
+++ FNG ++ W +++ + + + ++LTDP P L P
Sbjct: 13 SKIDPFNGTFFKRWQERVFSAIDVVNLEHILTDPKPKDGSHLLPT--------------- 57
Query: 245 WLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEF 304
W N RH IL+ LS+ L+ Y + AKE+W+ + Y+ E+ T++ + + F
Sbjct: 58 WETGNKQVRHAILSTLSNELFDIYCQ-FKVAKEIWDAMNKKYILEDAETQKYAIGNFRNF 116
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVS 340
QM +++ V Q + + + + + + + E F V+
Sbjct: 117 QMIEDRDVSSQIHDYHLLINDLAIEDIKLPEPFVVA 152
>gi|339233212|ref|XP_003381723.1| RNA polymerase II transcriptional coactivator [Trichinella
spiralis]
gi|316979427|gb|EFV62223.1| RNA polymerase II transcriptional coactivator [Trichinella
spiralis]
Length = 144
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAFSKS 147
++ D L ++ V + EF+GR V IREYF+ DG++ PT KGI+L+ EQ++
Sbjct: 69 EESDEFKLDLGGRKFVHVNEFRGRKRVDIREYFQASDGQVRPTKKGISLSHEQFQLL--- 125
Query: 148 LPAIDEAVVKMQSKLRSE 165
L + D+ +K +SKL SE
Sbjct: 126 LDSADK--IKDKSKLISE 141
>gi|62733619|gb|AAX95736.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
[Oryza sativa Japonica Group]
gi|110288782|gb|AAP52615.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 892
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 22/191 (11%)
Query: 273 SSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMM 332
+S ++W+ L+ + + ++ ++K+ +++M D++SV EQA E+ +A +
Sbjct: 2 ASGNDMWDALEAKFGVSDASSELYVMEKFYDYKMVDDRSVVEQAHEIQMLAKELENNNCE 61
Query: 333 IYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKF 390
+ + F I++KLP W DF L R E+ + + L+ + EE +R+ ++ K
Sbjct: 62 LPDKFVAGGIIAKLPPFWSDFVTSLKHKRQEF-SVSDLIGSLGVEENARA---KDNLGKK 117
Query: 391 VELSPAVNF----GPRMREMSKKRRESEMDSKTVV------------CYNCRKKGHVAKH 434
VE + N P+ +KK + T C+ RK GH AK
Sbjct: 118 VERGSSANMVQKKNPQASHNNKKVKPDVKPKATTNFKKKGKGKAKGDCFVSRKSGHWAKD 177
Query: 435 CHNKRLHQEIN 445
C ++ + N
Sbjct: 178 CPERKDRKSAN 188
>gi|380092398|emb|CCC10175.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 217
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 79 QRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTS 138
Q ++ K + DG++ +L + R ++ F+ ++IREY+ DGKL+P KGI+L+
Sbjct: 30 QPQELTKGSDQDGNTFW-ELGSNRRISSSVFRNTTLINIREYYNADGKLMPGKKGISLSL 88
Query: 139 EQWRAFSKSLPAIDEAVVK 157
Q++A K +P ++ + K
Sbjct: 89 AQYQALLKVIPQLNADLRK 107
>gi|50540080|ref|NP_001002505.1| RNA polymerase II transcriptional coactivator [Danio rerio]
gi|49900783|gb|AAH76294.1| SUB1 homolog (S. cerevisiae) [Danio rerio]
Length = 124
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
I KL R V++++FKG+ + IREY+ + G++ P KGI+L EQW + + ID+
Sbjct: 63 IGKL---RYVSVRDFKGKVLIDIREYWMDQAGEMKPGKKGISLNPEQWSQLKEQMSDIDD 119
Query: 154 AV 155
A+
Sbjct: 120 AI 121
>gi|198433464|ref|XP_002128161.1| PREDICTED: similar to general transcriptional coactivator [Ciona
intestinalis]
Length = 123
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 36/58 (62%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
L + + ++ FK + + IRE++++DG++ P KGI+L++EQW S+ +D +
Sbjct: 62 LGKMKFIDVRTFKDKILIDIREHYQKDGEIKPGKKGISLSTEQWEKLKMSMEEVDSRI 119
>gi|2981801|pdb|1PCF|A Chain A, Human Transcriptional Coactivator Pc4 C-Terminal Domain
gi|2981802|pdb|1PCF|B Chain B, Human Transcriptional Coactivator Pc4 C-Terminal Domain
gi|2981803|pdb|1PCF|C Chain C, Human Transcriptional Coactivator Pc4 C-Terminal Domain
gi|2981804|pdb|1PCF|D Chain D, Human Transcriptional Coactivator Pc4 C-Terminal Domain
gi|2981805|pdb|1PCF|E Chain E, Human Transcriptional Coactivator Pc4 C-Terminal Domain
gi|2981806|pdb|1PCF|F Chain F, Human Transcriptional Coactivator Pc4 C-Terminal Domain
gi|2981807|pdb|1PCF|G Chain G, Human Transcriptional Coactivator Pc4 C-Terminal Domain
gi|2981808|pdb|1PCF|H Chain H, Human Transcriptional Coactivator Pc4 C-Terminal Domain
gi|88192567|pdb|2C62|A Chain A, Crystal Structure Of The Human Transcription Cofactor Pc4
In Complex With Single-Stranded Dna
gi|88192568|pdb|2C62|B Chain B, Crystal Structure Of The Human Transcription Cofactor Pc4
In Complex With Single-Stranded Dna
gi|146387160|pdb|2PHE|A Chain A, Model For Vp16 Binding To Pc4
gi|146387161|pdb|2PHE|B Chain B, Model For Vp16 Binding To Pc4
Length = 66
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 97 KLSNKRTVAIQEFKGRAFVSIREYFRR-DGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + + ID+AV
Sbjct: 4 QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAV 63
Query: 156 VKM 158
K+
Sbjct: 64 RKL 66
>gi|339257036|ref|XP_003370107.1| RNA polymerase II transcriptional coactivator [Trichinella
spiralis]
gi|316959209|gb|EFV47594.1| RNA polymerase II transcriptional coactivator [Trichinella
spiralis]
Length = 102
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAFSKS 147
++ D L ++ V + EF+GR V IREYF+ DG++ PT KGI+L+ EQ++
Sbjct: 27 EESDEFKLDLGGRKFVHVNEFRGRKRVDIREYFQASDGQVRPTKKGISLSHEQFQLL--- 83
Query: 148 LPAIDEAVVKMQSKLRSE 165
L + D+ +K +SKL SE
Sbjct: 84 LDSADK--IKDKSKLISE 99
>gi|449534468|ref|XP_004174184.1| PREDICTED: uncharacterized protein LOC101230176, partial [Cucumis
sativus]
Length = 154
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV 238
+S ++L +E + NG NY W + +L + +VLT+ CP P +++ +R
Sbjct: 3 SSIVQLLASE--KLNGDNYAAWKSNLNTILVVDDLRFVLTEECP---QNPASNANRTSR- 56
Query: 239 KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
A +W+ N R +IL +SD L ++ + ++AKE+ + L+ ++ E+ + V
Sbjct: 57 -DAYDRWIKANEKARVYILASMSDVLAKKH-ESLATAKEIMDSLRGMFGQPEWSLRHEAV 114
Query: 299 KKYIEFQMFDEKSVFEQALEL 319
K +M + SV E L++
Sbjct: 115 KYIYTKRMKEGTSVREHVLDM 135
>gi|317157492|ref|XP_001826504.2| RNA polymerase II transcriptional coactivator [Aspergillus oryzae
RIB40]
gi|391868223|gb|EIT77442.1| hypothetical protein Ao3042_06381 [Aspergillus oryzae 3.042]
Length = 173
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 60 LSTTESTDNRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIRE 119
L T+ T +R + ++R ++ +GD ++S R V I F+G+ V+IRE
Sbjct: 23 LKRTKFTSSRSGAACDSSKRRTGATGNVDANGDHY-WEISKMRRVTISSFRGKTLVNIRE 81
Query: 120 YFRRDGKLVPTAKGIALTSEQWRAFSKSLPAID 152
Y+ +DG+ +P KGI+L +Q+ + LP I+
Sbjct: 82 YYEKDGQELPGKKGISLPIDQFASLVTLLPDIE 114
>gi|449473960|ref|XP_004154032.1| PREDICTED: uncharacterized protein LOC101213802, partial [Cucumis
sativus]
Length = 145
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV 238
+S ++L +E + NG NY W + +L + +VLT+ CP P +++ +R
Sbjct: 3 SSIVQLLASE--KLNGDNYAAWKSNLNTILVVGDLRFVLTEECP---QNPASNANRTSR- 56
Query: 239 KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
A +W+ N R +IL +SD L ++ + ++AKE+ + L+ ++ E+ + V
Sbjct: 57 -DAYDRWIKANEKARVYILASMSDVLAKKH-ESLATAKEIMDSLRGMFGQPEWSLRHEAV 114
Query: 299 KKYIEFQMFDEKSVFEQALEL 319
K +M + SV E L++
Sbjct: 115 KYIYTKRMKEGTSVREHVLDM 135
>gi|336275131|ref|XP_003352319.1| hypothetical protein SMAC_02752 [Sordaria macrospora k-hell]
Length = 164
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 79 QRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTS 138
Q ++ K + DG++ +L + R ++ F+ ++IREY+ DGKL+P KGI+L+
Sbjct: 30 QPQELTKGSDQDGNTF-WELGSNRRISSSVFRNTTLINIREYYNADGKLMPGKKGISLSL 88
Query: 139 EQWRAFSKSLPAID 152
Q++A K +P ++
Sbjct: 89 AQYQALLKVIPQLN 102
>gi|169599549|ref|XP_001793197.1| hypothetical protein SNOG_02595 [Phaeosphaeria nodorum SN15]
gi|111068206|gb|EAT89326.1| hypothetical protein SNOG_02595 [Phaeosphaeria nodorum SN15]
Length = 180
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 86 RINDDGDSIIC-KLSNKRTVAIQEFKGRAFVSIREYFRRD-GKLVPTAKGIALTSEQWRA 143
+ NDDG+ + KR + I+EFK + +REY+ D G+L P KGI+L +Q+
Sbjct: 59 KTNDDGEKFVGLSAGGKRRITIREFKNTLLLDVREYWTNDAGELKPGKKGISLNLDQYNT 118
Query: 144 FSKSLPAIDEAVVKMQS 160
+LP I+ A+ + ++
Sbjct: 119 LVAALPLIEVALAEKKA 135
>gi|349605909|gb|AEQ00989.1| Activated RNA polymerase II transcriptional coactivator p15-like
protein, partial [Equus caballus]
Length = 63
Score = 49.7 bits (117), Expect = 0.003, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 97 KLSNKRTVAIQEFKGRAFVSIREYFRR-DGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
++ R V++++FKG+ + IREY+ +G++ P KGI+L EQW + + ID+AV
Sbjct: 1 QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAV 60
Query: 156 VKM 158
K+
Sbjct: 61 RKL 63
>gi|77556338|gb|ABA99134.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1083
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 44/227 (19%)
Query: 242 ERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKY 301
E K+ + + R +++ L+D++ Y S K++W+ L + +FG + + Y
Sbjct: 21 EAKFEASDCLFRGALISVLADNIVDVY-MHMPSGKDMWDAL-----EAKFGVSDAGSELY 74
Query: 302 IEFQMFDEKSVFEQALELN--KIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLM- 358
+ ++D K + + LE N ++ D VA G I++KLP SW DF L
Sbjct: 75 VMEMLYDYKMMLAKKLENNNCELPDKFVAGG-----------IIAKLPPSWLDFATSLKH 123
Query: 359 -RMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPRMREMSKKRRES 413
R E+ + T L+ + EE++R+ + + K +E + N P + ++
Sbjct: 124 KRQEF-SVTDLIGSLGVEEKARAKDNR---GKNIEGGSSTNLVQQKNPHASHNNNNNKKV 179
Query: 414 EMDSKTVV---------------CYNCRKKGHVAKHCHNKRLHQEIN 445
+ D K C+ C K GH AK+C +++ + N
Sbjct: 180 KPDVKPKATTNFKKKGKGKAKGDCFVCGKPGHWAKNCPDRKDKKSAN 226
>gi|440577370|emb|CCI55375.1| PH01B035L11.20 [Phyllostachys edulis]
Length = 456
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+N+ + +++ L + L Y + KE W+ L+ + + G++ +++Y +++M D
Sbjct: 34 DNLFKGAVVSVLGEKLVDAY-MVIKTGKEKWDALEAKFGVSDGGSELYLMEQYHDYRMVD 92
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTM 367
+SV EQ E+ +A + ++ + F I++KLP SW++F L + + +
Sbjct: 93 SRSVVEQVHEIQSMATELEYFKCVLPDKFIAGGIIAKLPPSWRNFSTSLKHKRQEFSVEN 152
Query: 368 LMDHIKAEEESRS 380
L+ + EE+ R+
Sbjct: 153 LIGSLDVEEKKRA 165
>gi|449472523|ref|XP_004153620.1| PREDICTED: uncharacterized protein LOC101208283, partial [Cucumis
sativus]
Length = 185
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV 238
+S ++L +E + NG NY W + +L + +VLT+ CP +S++
Sbjct: 3 SSIVQLLASE--KLNGDNYAAWKSNLNTILVVGDLRFVLTEECP-----QNPASDDNRTS 55
Query: 239 KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
+ A +W+ N R +IL +SD L ++ + ++AKE+ L+ ++ E + V
Sbjct: 56 RDAYDRWIKANEKARVYILASMSDVLAKKH-ESLATAKEIMNSLRGMFGQPELSLRHEAV 114
Query: 299 KKYIEFQMFDEKSVFEQALEL 319
K +M + SV E L++
Sbjct: 115 KYIYTKRMKEGTSVREHVLDM 135
>gi|410057609|ref|XP_003954243.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Pan troglodytes]
Length = 127
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 102 RTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
R V++ +FKG+ + REY+ +G++ P KGI+L EQW + + ID+AV K+
Sbjct: 70 RYVSVGDFKGKVLIETREYWMDPEGEMKPGRKGISLNPEQWSPLKEQISVIDDAVRKL 127
>gi|449526704|ref|XP_004170353.1| PREDICTED: uncharacterized protein LOC101229041, partial [Cucumis
sativus]
Length = 154
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV 238
+S ++L +E + NG NY W + +L + +VLT+ CP P +++ +R
Sbjct: 3 SSIVQLLASE--KLNGDNYAAWKSNLNTILVVDDLRFVLTEECP---QNPASNANRTSR- 56
Query: 239 KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
A +W+ N R +IL +SD L ++ + ++AKE+ L+ ++ E + V
Sbjct: 57 -DAYDRWIKANEKARVYILASMSDVLAKKH-ESLATAKEIMNSLRGMFGQPELSLRHEAV 114
Query: 299 KKYIEFQMFDEKSVFEQALEL 319
K +M + SV E L++
Sbjct: 115 KYIYTKRMKEGTSVREHVLDM 135
>gi|147799024|emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
Length = 950
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 112/252 (44%), Gaps = 21/252 (8%)
Query: 188 ELHRFNGKN-YRVWAQQIELLLKQLKVAYVLTDPCPI-VTLCPQASSEEVTRVKAAERKW 245
E+ +FNG N + +W +++ LL Q K A + + V L E V+R +A
Sbjct: 7 EVEKFNGSNDFTLWKLKMKALLVQQKCAQAIEGEETLPVGLTAVEKEEVVSRAHSA---- 62
Query: 246 LNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQ 305
IL L+D + + + T+ A LW + + Y + + Q ++ +
Sbjct: 63 ----------ILLSLADEVLREVADETT-AVGLWRKFESKYQKKSLTNRLYQKRQLHTLK 111
Query: 306 MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLM-RMEYLT 364
M + V + N+I + G+ + E ++L LP S+++F +M + ++
Sbjct: 112 MSEGMQVRDHLNNFNRIILDLNGVGVKVEEEDQAMILLCSLPSSYENFVDTMMYGRBSIS 171
Query: 365 FTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV-CY 423
+ D ++++E + + EE S VE V+ G M R +S SK + C+
Sbjct: 172 XNDVKDALQSKELQKLVSGSEEGS--VETGLTVSRGRSMERNGGGRSKSXSKSKAAMRCF 229
Query: 424 NCRKKGHVAKHC 435
+ ++KGH K+C
Sbjct: 230 HXKEKGHFRKNC 241
>gi|367023691|ref|XP_003661130.1| hypothetical protein MYCTH_2300175 [Myceliophthora thermophila ATCC
42464]
gi|347008398|gb|AEO55885.1| hypothetical protein MYCTH_2300175 [Myceliophthora thermophila ATCC
42464]
Length = 146
Score = 48.9 bits (115), Expect = 0.005, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 97 KLSNKRTVAIQEFKGRAFVSIREYFRR-DGKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
++ N R + +FKG V+IREY+ DG+L P KGI+LT EQ++A + +P ++E
Sbjct: 46 EIGNNRRIGSSKFKGSTLVNIREYYTAPDGELRPGKKGISLTLEQYKALLRVIPELNE 103
>gi|255550572|ref|XP_002516336.1| RNA polymerase II transcriptional coactivator KIWI, putative
[Ricinus communis]
gi|223544566|gb|EEF46083.1| RNA polymerase II transcriptional coactivator KIWI, putative
[Ricinus communis]
Length = 84
Score = 48.9 bits (115), Expect = 0.005, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 85 KRINDDGDSII-CKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALT 137
K DD D I+ C++S R V ++ ++G+ ++ IRE++ +DGK +P KGI +T
Sbjct: 29 KTTTDDSDDIVVCEISKNRRVTVRNWQGKVWIDIREFYLKDGKQLPGKKGITVT 82
>gi|15242363|ref|NP_196486.1| ssDNA-binding transcriptional regulator [Arabidopsis thaliana]
gi|9955511|emb|CAC05450.1| transcriptional co-activator-like protein [Arabidopsis thaliana]
gi|26450870|dbj|BAC42542.1| putative transcriptional co-activator [Arabidopsis thaliana]
gi|28416823|gb|AAO42942.1| At5g09240 [Arabidopsis thaliana]
gi|332003980|gb|AED91363.1| ssDNA-binding transcriptional regulator [Arabidopsis thaliana]
Length = 110
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVP--TAKGIALTSEQWRAFSKSLP 149
D IC L R V ++ GR +++IR++F +DG +P + +GI+L+ EQW
Sbjct: 39 DIFICNLDKNRRVFVRNCNGRIWIAIRQFFVKDGITLPCNSKQGISLSLEQWNDLRNHEE 98
Query: 150 AIDEAVVKM 158
ID+A+ ++
Sbjct: 99 DIDKALSEL 107
>gi|452820654|gb|EME27694.1| KIWI [Galdieria sulphuraria]
Length = 121
Score = 48.9 bits (115), Expect = 0.005, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 97 KLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
+LS R V +++F G+ V IREY+ L P KGI+L+ EQ+ L ID+A+
Sbjct: 58 ELSKTRRVTVRKFSGKMLVDIREYYNNGETLAPGRKGISLSIEQYEKLKSYLADIDDAI 116
>gi|147791050|emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]
Length = 1180
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 28/259 (10%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
F+G N+ W ++++ L L + L P P+A+ + + W N +
Sbjct: 4 FDGSNFSEWYERVQFSLGVLDLDLALISDKP-----PEATDDSTPEQVEQSKAWXKSNRL 58
Query: 252 C----RHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMF 307
R I N + L +T A E + ++ + + + + + +
Sbjct: 59 SLMFMRMTIANNIKTSL-----XQTEFASEFLKSVEERFKRADKSLAGTLMXELTTMKYD 113
Query: 308 DEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL------MRME 361
+K + + L + + A + A GM + E+F V +L+ LP + F I +
Sbjct: 114 GQKGIQQHILNMTEKAAKLKALGMGMDESFLVQFVLNSLPSXFAPFKIHYNTNSDQWNLN 173
Query: 362 YLTFTMLMDHIKAEEESRSHNKQEEPSKFV-----ELSPAVNFGPRMREMSKKRRESEMD 416
LT + + ++ +E HN + V + NF P+ + + +S
Sbjct: 174 ELTSKCIQEEVRLRQEG--HNXAXXVTHGVTKKKGKFKKGXNFPPK-KSXPGEGSQSHDG 230
Query: 417 SKTVVCYNCRKKGHVAKHC 435
TV CY C KKGHV K C
Sbjct: 231 KFTVSCYFCGKKGHVKKDC 249
>gi|218194360|gb|EEC76787.1| hypothetical protein OsI_14890 [Oryza sativa Indica Group]
Length = 330
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 298 VKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL 357
++++ +++M D++SV EQA E+ +A + + + F I++KLP SW DF L
Sbjct: 1 MEQFYDYKMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSL 60
Query: 358 -MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMD 416
+ + + + L+ + EE++R+ K K S A + S ++ + D
Sbjct: 61 KHKRQEFSVSDLIGSLGVEEKARA--KDVRGKKVEGGSSANKVQKKNPHASHNNKKVKPD 118
Query: 417 SKTVV-------------------CYNCRKKGHVAKHCHNKRLHQEIN 445
K V C+ C K GH AK C ++ + N
Sbjct: 119 VKPDVKPNAATNFKKKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 166
>gi|123421330|ref|XP_001305970.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121887519|gb|EAX93040.1| hypothetical protein TVAG_255210 [Trichomonas vaginalis G3]
Length = 96
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%)
Query: 101 KRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQS 160
K+ + + +FKG+ IRE + +D + +P KGI+L E ++ + +P ++EA+V +
Sbjct: 30 KKRIQVHKFKGKILFDIRELYCKDDEWLPGKKGISLRVEDFKKLKELMPLVEEAIVALGG 89
Query: 161 KLRSES 166
L +S
Sbjct: 90 NLDDDS 95
>gi|325192131|emb|CCA26590.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 277
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 79 QRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTS 138
+R +I I+ D LS KR + +++++ V IRE ++ +G KGI+L+
Sbjct: 92 KRIKINDEISQQQDEYSFSLSAKRNITVRKWRKATVVDIRELYQVNGVDKYGKKGISLSL 151
Query: 139 EQWRAFSKSLPAIDEAVV 156
+QW+ SK P +DE +
Sbjct: 152 QQWQTLSKLAPTVDETIA 169
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQW 141
L+ KR V ++ FK + IREY+ +DG P KGI+L+++QW
Sbjct: 201 LAQKRRVTVRIFKAAVLIDIREYYEQDGDWRPGKKGISLSTDQW 244
>gi|147816842|emb|CAN77765.1| hypothetical protein VITISV_021568 [Vitis vinifera]
Length = 611
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 109/282 (38%), Gaps = 55/282 (19%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+E+ +F+G ++ W QIE L K+ P++ P++ +KA E L
Sbjct: 9 SEIEKFDGTDFAYWKMQIEDYLYGRKLHL------PLLRTKPES-------LKAEEWALL 55
Query: 247 NDNNICRHHILNF----LSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI 302
N IL LS + + K ++A +L + L +Y K +KK
Sbjct: 56 N------RQILGVIRLTLSRSVAHNVVKEKTTA-DLMKALSGMYEKSSANNKVHLMKKLF 108
Query: 303 EFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM-- 360
+M + SV + E N I + + + + E ++L+ LP SW + MRM
Sbjct: 109 NLKMAENASVAQHLNEFNTITNQLSSVEIDFDEEIRALIVLASLPNSW-----EAMRMAV 163
Query: 361 ------EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMRE--------M 406
E L + + D I AEE R + S A+N R
Sbjct: 164 SNXTGKEKLKYNDIXDLILAEEIRRRDXGETSGS-----GSALNLETRXXGNBXNSNQCR 218
Query: 407 SKKRRESEMDSKT-----VVCYNCRKKGHVAKHCHNKRLHQE 443
SK R + SK+ V C+NC K H + C + + E
Sbjct: 219 SKSRNSNXNRSKSRSGQQVQCWNCGKTSHFKRQCKSPKKKNE 260
>gi|297811011|ref|XP_002873389.1| transcriptional coactivator p15 family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319226|gb|EFH49648.1| transcriptional coactivator p15 family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 110
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 82 QIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVP--TAKGIALTSE 139
++ K ++ D IC L R V ++ GR +++IR++F +DG +P + GI+L+ E
Sbjct: 29 KVAKPADETEDIFICNLDKNRRVFVRNCNGRIWIAIRQFFVKDGITLPCNSKHGISLSLE 88
Query: 140 QWRAFSKSLPAIDEAVVKM 158
QW ID+A+ +
Sbjct: 89 QWNDLRNHEEDIDKALSDL 107
>gi|326428836|gb|EGD74406.1| hypothetical protein PTSG_06417 [Salpingoeca sp. ATCC 50818]
Length = 261
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVK 157
L KR V++ FKG V +RE++ +DGK +P KG++L + +W++ K+ EA K
Sbjct: 116 LDAKRRVSVTVFKGNVLVGLREWYEKDGKTLP-GKGVSLKAPEWKSLVKNAKTATEAFEK 174
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 100 NKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
++ ++++ +KG++F +RE++ + G++ PT KG L+ W+ +P +D+AV ++
Sbjct: 189 GQKRLSLRSYKGKSFFDVREHYEDKAGEIKPTRKGATLSDAVWKRLCTLMPHVDKAVAQL 248
>gi|297801358|ref|XP_002868563.1| hypothetical protein ARALYDRAFT_915982 [Arabidopsis lyrata subsp.
lyrata]
gi|297314399|gb|EFH44822.1| hypothetical protein ARALYDRAFT_915982 [Arabidopsis lyrata subsp.
lyrata]
Length = 94
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 8 RIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLSTTESTD 67
+I +TV ++L++S++ ++TE K R EAS L +DLS +K +R VVESFL +
Sbjct: 21 KIEKTVKKILESSNLYKITEIKAREEASLELDLDLSQDPYKVIVREVVESFLEEAVKVIG 80
Query: 68 NRI 70
NRI
Sbjct: 81 NRI 83
>gi|448116191|ref|XP_004202995.1| Piso0_001868 [Millerozyma farinosa CBS 7064]
gi|359383863|emb|CCE79779.1| Piso0_001868 [Millerozyma farinosa CBS 7064]
Length = 152
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 91 GDSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSL 148
G+ ++ +L K+ V +++F V IRE+F R + PT KGI+LT E W+ S+
Sbjct: 21 GNDVVIELDKKKQVTVRKFNNINLVDIREFFEDRETNEKKPTKKGISLTEESWKKLVSSI 80
Query: 149 PAIDEAV-----VKMQSKLRSESSGEQNKDVAN 176
I +A+ VK + ESS E K+ A+
Sbjct: 81 GEIQDALDELKGVKPSKAQKLESSEESTKNNAD 113
>gi|32487835|emb|CAE05066.1| OSJNBa0094P09.5 [Oryza sativa Japonica Group]
gi|32492383|emb|CAE05129.1| OSJNBa0079F16.21 [Oryza sativa Japonica Group]
Length = 849
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 20/150 (13%)
Query: 306 MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYL 363
M D +SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY
Sbjct: 1 MADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY- 59
Query: 364 TFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV--- 420
+ L+ + EEE+R +++ SK + N + + SK + +++ +
Sbjct: 60 SVEGLIASLDVEEEAR---EKDAASKGHGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQK 116
Query: 421 -----------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 117 KNNNNPNQDERTCFVCGQPGHLARKCPQRK 146
>gi|452981386|gb|EME81146.1| hypothetical protein MYCFIDRAFT_89755 [Pseudocercospora fijiensis
CIRAD86]
Length = 177
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 94 IICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
+ ++S+++ + + E+K ++IR+Y+ +DGK++P KG AL++EQ A LP + E
Sbjct: 43 VYWEISSRKRLTVSEYKKTTLINIRDYYEKDGKMLP-GKGTALSTEQLNAVITLLPEL-E 100
Query: 154 AVVKMQS 160
+V+K +
Sbjct: 101 SVLKSKG 107
>gi|38344704|emb|CAE05246.2| OSJNBb0115I09.8 [Oryza sativa Japonica Group]
Length = 295
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 273 SSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMM 332
+ AKELW+ L + + ++++ +++M D +S+ EQA E+ +A + +
Sbjct: 42 TDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSIVEQAHEIQTMAKELELLKCV 101
Query: 333 IYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKF 390
+ + F I++KL SW+ F +K R EY + L+ + EE+++ +++ SK
Sbjct: 102 LPDKFVAGCIIAKLSPSWRSFGTALKHKRQEY-SVEGLIASLDVEEKAQ---EKDAASKG 157
Query: 391 VELSPAVNFGPRMREMSKKRRESEMDSKTV--------------VCYNCRKKGHVAKHCH 436
+ N + + SK + +++ + C+ C + GH+A C
Sbjct: 158 DGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDEWTCFVCGQLGHLASKCP 217
Query: 437 NKR 439
++
Sbjct: 218 QRK 220
>gi|108705854|gb|ABF93649.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1269
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE + +A++
Sbjct: 111 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEEEAKFEASD------- 159
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 160 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 218
Query: 310 KSVFEQALELNKIA 323
+SV EQA E+ +A
Sbjct: 219 RSVVEQAHEIQMLA 232
>gi|260947210|ref|XP_002617902.1| hypothetical protein CLUG_01361 [Clavispora lusitaniae ATCC 42720]
gi|238847774|gb|EEQ37238.1| hypothetical protein CLUG_01361 [Clavispora lusitaniae ATCC 42720]
Length = 117
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 16/82 (19%)
Query: 91 GDSIICKLS----NKRTVAIQEFKGRAFVSIREYF-------RRDGKLVPTAKGIALTSE 139
GD +LS +K+ V + FKG V IREY+ R+ GK KGIALT E
Sbjct: 13 GDDKTTQLSLELDSKKAVTVSSFKGIPLVDIREYYTDASTKERKPGK-----KGIALTVE 67
Query: 140 QWRAFSKSLPAIDEAVVKMQSK 161
W+ +S I+EA+ +Q+K
Sbjct: 68 TWKKLLESQNEINEALDSLQNK 89
>gi|385304468|gb|EIF48486.1| transcriptional coactivator p15 [Dekkera bruxellensis AWRI1499]
Length = 151
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 85 KRINDDGD-SIICKL-SNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWR 142
K+ DDG I +L + +R V +++F+ V IREY++++ + +P KGI+LT +QW
Sbjct: 15 KKQQDDGQPKIQFELGAERRRVTVRKFRNMKLVDIREYYQKNEEWLPGTKGISLTEDQWG 74
Query: 143 AFSKSLPAIDEAV 155
+ I+EA+
Sbjct: 75 ILVSKIGEINEAL 87
>gi|254569646|ref|XP_002491933.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031730|emb|CAY69653.1| Hypothetical protein PAS_chr2-2_0261 [Komagataella pastoris GS115]
gi|328351570|emb|CCA37969.1| Putative RNA polymerase II transcriptional coactivator
[Komagataella pastoris CBS 7435]
Length = 122
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 85 KRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRA 143
++++D+ + L K+ V ++ FKG V IRE++ +G+L P KGI+LT E W+
Sbjct: 6 RQLDDEVNETKIDLGKKKQVTVRNFKGVKLVDIREFYTTSEGELRPGKKGISLTEETWKT 65
Query: 144 FSKSLPAIDEAV 155
++ I A+
Sbjct: 66 LVDNIGKIQSAL 77
>gi|354491665|ref|XP_003507975.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Cricetulus griseus]
gi|344240962|gb|EGV97065.1| Activated RNA polymerase II transcriptional coactivator p15
[Cricetulus griseus]
Length = 124
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D I ++ R +++++FKG + IREY+ +G++ KGI+L EQW + +
Sbjct: 57 DGNIFQIGKMRYISVRDFKGLILIDIREYWMDSEGEMKLGRKGISLNVEQWSQLKEQISD 116
Query: 151 IDEAVVKM 158
ID+AV K+
Sbjct: 117 IDDAVRKL 124
>gi|390360809|ref|XP_001179446.2| PREDICTED: uncharacterized protein LOC752530 [Strongylocentrotus
purpuratus]
Length = 175
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDG--KLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
L KR +++F+G +V+IREY+ G +++P KGI LT E W K+ I +AV
Sbjct: 108 LGGKRFAVVKKFRGVPYVNIREYYNTKGTNRMLPGQKGINLTGENWWKLVKAKFEISDAV 167
>gi|115757331|ref|XP_001185847.1| PREDICTED: uncharacterized protein LOC754487 [Strongylocentrotus
purpuratus]
Length = 175
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDG--KLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
L KR +++F+G +V+IREY+ G +++P KGI LT E W K+ I +AV
Sbjct: 108 LGGKRFAVVKKFRGVPYVNIREYYNTKGTNRMLPGQKGINLTGENWWKLVKAKFEISDAV 167
>gi|425772282|gb|EKV10692.1| hypothetical protein PDIG_55300 [Penicillium digitatum PHI26]
gi|425782745|gb|EKV20638.1| hypothetical protein PDIP_14650 [Penicillium digitatum Pd1]
Length = 1008
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%)
Query: 97 KLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
++S R V I F+G+ V++REY+ ++G+ +P KGI++ +Q+ A LP I++
Sbjct: 901 EISKMRRVTISSFRGKTQVNVREYYEKNGQELPGKKGISMPVDQFAAIISILPEIEQ 957
>gi|147826814|emb|CAN68398.1| hypothetical protein VITISV_007896 [Vitis vinifera]
Length = 1077
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 30/157 (19%)
Query: 148 LPAIDEAVVKMQSKL-----RSESSGEQNKDVANSMTSPLELFPTELHRFNGKNYRVWAQ 202
+P ID + + +++ R+++S + +A+S T+P+ + + G NY +W+Q
Sbjct: 12 IPQIDSILSDLTTRMTEVLTRAQTSPQ--PLLADSSTTPIGI------KLEGSNYALWSQ 63
Query: 203 QIELLLK-QLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHHILNFLS 261
+E+ + + K+ Y+ D PQ + + R+W N I + ++N +
Sbjct: 64 VVEMYISGKDKLGYINGD-------SPQPPETD-----PSFRRWRTKNAIVKGWLINSMD 111
Query: 262 DHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
L + R +AK++W+ + + Y D GT SQV
Sbjct: 112 PSLIANFI-RFPTAKQVWDSVAITYFD---GTDTSQV 144
>gi|169847077|ref|XP_001830250.1| hypothetical protein CC1G_01886 [Coprinopsis cinerea okayama7#130]
gi|116508502|gb|EAU91397.1| hypothetical protein CC1G_01886 [Coprinopsis cinerea okayama7#130]
Length = 161
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 86 RINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFS 145
+ N G+ I L K+ ++ FKG+ + IRE++ D L P KGI+L EQW+A
Sbjct: 89 KTNKQGEKYID-LGKKKFATVRTFKGKPLLDIREFWGDDDDLKPGKKGISLNLEQWQALR 147
Query: 146 KSLPAID 152
+ + +D
Sbjct: 148 EGIDDLD 154
>gi|147777683|emb|CAN78199.1| hypothetical protein VITISV_041785 [Vitis vinifera]
Length = 892
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 298 VKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL 357
+KK + +M + S+ + E N I + + + + + ++L+ LP SW+ + +
Sbjct: 149 MKKLLNLKMVENASIAQHLNEFNTITNQLSSIEIDFDDEIRALIVLASLPNSWEAMMMVV 208
Query: 358 MRM---EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMRE--------M 406
E L + + D I AEE R + + S F A+N R R
Sbjct: 209 SNSTGKEKLKYNDIRDLILAEEIRRRYAGETSGSSF-----ALNLETRGRGNDRNSNQGR 263
Query: 407 SKKRRESEMDSKT-----VVCYNCRKKGHVAKHCHNKRLHQE 443
SK R + SK+ V C+NC K GH + C N + E
Sbjct: 264 SKSRNSNRNISKSRSSQQVQCWNCGKTGHFKRQCKNPKKKNE 305
>gi|300120308|emb|CBK19862.2| Transcriptional coactivator p15 [Blastocystis hominis]
Length = 107
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAFSK 146
DD + +S+++ V + EF+G V+IREY + DG+ PT KGI LT E + A K
Sbjct: 31 DDEYGWMISISSRKAVTVNEFRGEPSVNIREYVKLDDGRTAPTKKGIFLTEENYNALMK 89
>gi|428184812|gb|EKX53666.1| hypothetical protein GUITHDRAFT_100644 [Guillardia theta CCMP2712]
Length = 115
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 101 KRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
++ + + +FKG + +REY+ +DG +P GIAL+ EQW+ + EAV
Sbjct: 55 QKRITVNKFKGNVNIHLREYYEKDGDFLPGKAGIALSQEQWKLAISLAEQVKEAV 109
>gi|17137156|ref|NP_477136.1| single stranded-binding protein c31A [Drosophila melanogaster]
gi|37090031|sp|Q9VLR5.1|TCP4_DROME RecName: Full=RNA polymerase II transcriptional coactivator;
AltName: Full=p11
gi|7297359|gb|AAF52619.1| single stranded-binding protein c31A [Drosophila melanogaster]
gi|66772731|gb|AAY55677.1| IP02710p [Drosophila melanogaster]
gi|220951244|gb|ACL88165.1| Ssb-c31a-PA [synthetic construct]
gi|220959914|gb|ACL92500.1| Ssb-c31a-PA [synthetic construct]
Length = 110
Score = 47.0 bits (110), Expect = 0.017, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 67 DNRIEPDLEVEEQRAQIGKRINDDGD--SIICKLSNKRTVAIQEFKGRAFVSIREYFRRD 124
D+RI+P + ++ D G+ + L R V I EF+GR V IRE++ +
Sbjct: 18 DDRIKPASKKAKESDAPNSDPKDSGENGATSWTLEGLRQVRINEFRGRKSVDIREFYDKG 77
Query: 125 GKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
G+++P KGI+L+ QW+ + + A+
Sbjct: 78 GQILPGKKGISLSLIQWKKLLEVAEEVTRAI 108
>gi|224001396|ref|XP_002290370.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973792|gb|EED92122.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 113
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
N DG++ NKR ++++K V IRE++ +DGK +P KGI+LT EQ++A
Sbjct: 40 NADGEAYFDITKNKRCT-VRKWKKAVLVDIREFYEKDGKQLPGKKGISLTLEQYKAL 95
>gi|336473206|gb|EGO61366.1| hypothetical protein NEUTE1DRAFT_77322 [Neurospora tetrasperma FGSC
2508]
gi|350293526|gb|EGZ74611.1| PC4-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 172
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 79 QRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTS 138
Q ++ K + DG++ +L N R ++ F+ V+IREY+ GKL+P KGI+L+
Sbjct: 30 QPQELTKGSDQDGNTF-WELGNNRRISSSVFRNTTLVNIREYYDAGGKLMPGKKGISLSL 88
Query: 139 EQWRAFSKSLPAID 152
Q++ K +P ++
Sbjct: 89 AQYQNLLKVIPQLN 102
>gi|85090159|ref|XP_958285.1| hypothetical protein NCU04584 [Neurospora crassa OR74A]
gi|37088308|sp|Q872F4.1|TCP4_NEUCR RecName: Full=Putative RNA polymerase II transcriptional
coactivator
gi|28919630|gb|EAA29049.1| predicted protein [Neurospora crassa OR74A]
gi|28950023|emb|CAD70778.1| conserved hypothetical protein [Neurospora crassa]
Length = 172
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 79 QRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTS 138
Q ++ K + DG++ +L N R ++ F+ V+IREY+ GKL+P KGI+L+
Sbjct: 30 QPQELTKGSDQDGNTF-WELGNNRRISSSVFRNTTLVNIREYYDAGGKLMPGKKGISLSL 88
Query: 139 EQWRAFSKSLPAID 152
Q++ K +P ++
Sbjct: 89 AQYQNLLKVIPQLN 102
>gi|255560368|ref|XP_002521199.1| conserved hypothetical protein [Ricinus communis]
gi|223539564|gb|EEF41151.1| conserved hypothetical protein [Ricinus communis]
Length = 92
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 206 LLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLY 265
L + + KV YVL TL P + E +KW ++ I R HILN +SD L+
Sbjct: 4 LPIGKFKVVYVLN------TLKPVETENETLADTRERQKWETNDEIFRGHILNPMSDSLF 57
Query: 266 YQYSKRTSSAKELWEELKLVYLDEE 290
Y +AKELW++L++ Y+ E+
Sbjct: 58 DVYHS-IPTAKELWDKLEIKYMQED 81
>gi|116634841|emb|CAH67291.1| OSIGBa0103O01.9 [Oryza sativa Indica Group]
Length = 857
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 39/210 (18%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQ 315
L L+D++ Y S K++W+ L + +FG + + YI Q +D K + +
Sbjct: 35 FLGVLTDNIVDVY-MHMPSGKDMWDTL-----EAKFGVSDAGSELYIMEQFYDYKMMLAK 88
Query: 316 ALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTFTMLMDHIK 373
LE N + + F V I +KLP SW DF L R E+ + L+ +
Sbjct: 89 ELENNNCE---------LPDKFVVGDITAKLPPSWSDFATSLKHKRQEF-SVIDLIGSLG 138
Query: 374 AEEESRSHNKQEEPSKFVELSPAVNF----GPRM-REMSKKRRESEMDSKTVV------- 421
EE++R+ +E K +E + N P + K+ +S++ K
Sbjct: 139 VEEKARA---KENRGKNIEGGSSANLVQKKNPHASHNNNNKKVKSDVKPKATTNFKKKGK 195
Query: 422 ------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K H AK+C +++ + N
Sbjct: 196 GNAKGDCFVCGKPRHWAKNCPDRKDKKSAN 225
>gi|444706203|gb|ELW47555.1| Activated RNA polymerase II transcriptional coactivator p15 [Tupaia
chinensis]
Length = 127
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 104 VAIQEFKGRAFVSIREYFRR-DGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
V++ +FKG + IREY+ +G++ P KGI+L EQW + + ID+ V K+
Sbjct: 72 VSVWDFKGNILIDIREYWMDPEGEMKPGRKGISLNPEQWSQLREQISEIDDVVRKL 127
>gi|38605792|emb|CAD39988.3| OSJNBb0045P24.6 [Oryza sativa Japonica Group]
Length = 982
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 255 HILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EFQMFDE 309
+IL+ L D L + + + AK+LW+ L + +FG + YI +++M D
Sbjct: 33 YILSVLGDRLV-EVNMHMTDAKDLWDAL-----NTKFGATDASNDLYIMEQFHDYRMADN 86
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWK 351
+SV EQA E+ +A + ++ + F I++KLP SW+
Sbjct: 87 RSVVEQAQEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWR 128
>gi|67476631|ref|XP_653878.1| transcriptional coactivator [Entamoeba histolytica HM-1:IMSS]
gi|56470877|gb|EAL48492.1| transcriptional coactivator, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449702812|gb|EMD43378.1| transcriptional coactivator p15 (PC4) protein, putative [Entamoeba
histolytica KU27]
Length = 151
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 90 DGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLP 149
DGD + +L ++ V + +F+G ++ +RE++ RDG+L P KGI+L ++ ++
Sbjct: 86 DGDKYV-QLGERKYVRLNQFRGTKYIDVREFYERDGELKPGQKGISLKDYEFEELVNNID 144
Query: 150 AI 151
I
Sbjct: 145 KI 146
>gi|448113539|ref|XP_004202376.1| Piso0_001868 [Millerozyma farinosa CBS 7064]
gi|359465365|emb|CCE89070.1| Piso0_001868 [Millerozyma farinosa CBS 7064]
Length = 180
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 86 RINDDG------DSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALT 137
R ND G + + +L K+ V +++F V IRE+F + G+ PT KGI+LT
Sbjct: 38 RGNDSGAAAQGVNDTVIELDKKKQVTVRKFNNINLVDIREFFEDKETGEKKPTKKGISLT 97
Query: 138 SEQWRAFSKSLPAIDEAV 155
E W+ S+ I +A+
Sbjct: 98 EESWKKLVSSVGKIQDAL 115
>gi|189191896|ref|XP_001932287.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973893|gb|EDU41392.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 175
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 87 INDDGDSIIC-KLSNKRTVAIQEFKGRAFVSIREYFRRD-GKLVPTAKGIALTSEQWRAF 144
+D+GD + S KR + + +F VSIREY+ D G++ P KGI+LT +Q+
Sbjct: 55 TDDNGDVYVALNTSGKRRLTVSDFNKNTLVSIREYYSTDSGEMRPGKKGISLTIDQYNTL 114
Query: 145 SKSLPAIDEAVVKMQ 159
+ P I EA +K +
Sbjct: 115 LAAAPLI-EATLKKK 128
>gi|449534421|ref|XP_004174161.1| PREDICTED: uncharacterized protein LOC101232745, partial [Cucumis
sativus]
Length = 154
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV 238
+S + L +E + NG NY W + +L + +VLT+ CP AS++ T
Sbjct: 3 SSIVRLLASE--KLNGDNYAAWKSNLNTILVVGDLRFVLTEECP----QNPASNDNRTSR 56
Query: 239 KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
+R W+ N R +IL +SD L ++ + ++AKE+ L+ ++ E + V
Sbjct: 57 DPYDR-WIKANEKARVYILASMSDVLAKKH-ESLATAKEIMNSLRGMFGQPELSLRHEAV 114
Query: 299 KKYIEFQMFDEKSVFEQALEL 319
K +M + SV E L++
Sbjct: 115 KYIYTKRMKEGTSVREHVLDM 135
>gi|147816208|emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
Length = 1317
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 26/200 (13%)
Query: 243 RKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI 302
R+W++DN +LN +S+ + A+ LW +L+ +Y + K +KK +
Sbjct: 40 RQWVDDN------VLNHVSEEKH---------ARSLWNKLEQLYARKTGNNKLLLIKKMM 84
Query: 303 EFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEY 362
+ D + + I + +V + E +L LP W+ F L
Sbjct: 85 SLKYQDGTPMTDHLNTFQGIINQLVGMNIKFEEEVQGLWLLGTLPNLWETFRTSLSN-SA 143
Query: 363 LTFTMLMDHIKA---EEESRSHNKQEEPSKFVELS----PAVNFGPRMREMSKKRRESEM 415
L M MD +K+ EE R ++ V ++ + + GP+ R+ SK +
Sbjct: 144 LDGIMNMDLVKSCVLNEEMRRKSQGSSSQSNVLVTEKKGKSKSRGPKNRDRSKSKTNKFA 203
Query: 416 DSKTVVCYNCRKKGHVAKHC 435
+ V C+ C KGH+ K+C
Sbjct: 204 N---VECHYCHLKGHIKKYC 220
>gi|38344873|emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
Length = 1314
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 69/269 (25%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EF 304
C IL+ L D L Y T AKELW+ L+ +FG + YI ++
Sbjct: 64 --C---ILSVLGDRLVEVYMHMTD-AKELWDA-----LNTKFGATDASNDLYIMEQFHDY 112
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLT 364
+M D +SV EQA E+ +A NF + +K R EY +
Sbjct: 113 KMADNRSVVEQAHEIQTMA------------NFGTA--------------LKHKRQEY-S 145
Query: 365 FTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV---- 420
L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 146 VEGLIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKK 202
Query: 421 ----------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+A+ C ++
Sbjct: 203 NNNNPNQDERTCFVCGQVGHLARKCPQRK 231
>gi|222612917|gb|EEE51049.1| hypothetical protein OsJ_31709 [Oryza sativa Japonica Group]
Length = 357
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 118/276 (42%), Gaps = 39/276 (14%)
Query: 175 ANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE 234
A+++++ + P G N++ W + + ++L + + L PI+ S++
Sbjct: 10 ASNISASINSIPV----LTGANFKEWKENVLIVLGVMDLDLALRKEQPIL-------SDK 58
Query: 235 VTRVKAAER-KWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGT 293
T+ + E +W N + + + + S+ ++AK E L+ + E
Sbjct: 59 STKDENMEHERWDRSNRMSLMIMKRSIPEAFRDSTSEEVTTAKVFLETLQKRFARNEKAE 118
Query: 294 KRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
+ + K I + + ++ E +E++ +A + A + + E+ + +IL LP + F
Sbjct: 119 TSTLLAKLISMRYKGKGNMREYIMEMSHLASKLKALKLDLSEDLLMHLILISLPTQFNQF 178
Query: 354 CIKL-MRMEYLTFTMLMDHIKAEEES-------------RSHNKQEEPSKFVELSPAVNF 399
+ + + T L+ H EEE S+NK+ + + V++ P +
Sbjct: 179 KVSYNCQKDKWTVNKLISHCVQEEERLKQDRIESAHLSMTSNNKKRKSKEAVDVQPPL-- 236
Query: 400 GPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
K+RE+ + CY C+K+GH+ K+C
Sbjct: 237 ---------KKRENNCGEEP--CYFCKKEGHMKKNC 261
>gi|224077858|ref|XP_002305439.1| predicted protein [Populus trichocarpa]
gi|222848403|gb|EEE85950.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 98/257 (38%), Gaps = 21/257 (8%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
NG N++ + ++L + + L P P E + K +W N +
Sbjct: 18 LNGSNFKSCKDNLLIVLGVMDLDLALRTDSP-----PPFKDESTSDEKRDMERWEKSNRM 72
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKS 311
C + + + S + ++AKE ++ ++ E + + I + + +
Sbjct: 73 CMMIMKRAIPEAFRGTMSDQITTAKEFLANIEKRFVKNEKAEIGTLLTSLISMKYKGKGN 132
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTMLMD 370
V E LE++ +A + A + + E+ V ++L LP + F + + E + L+
Sbjct: 133 VREYILEMSHLASKLKALQLELSEDLLVHLVLISLPTQFNQFKVSYNCQKETWSLNELIS 192
Query: 371 HIKAEEESRSHNKQEEPS----------KFVELSPAVNFGPRMREMSKKRRESEMDSKTV 420
H EEE ++ E K A P+ ++++K DS
Sbjct: 193 HCVQEEERLKQDRTESAHLATAFKDKGRKRKNFKDAAGTTPQKKQLTKSH-----DSVGS 247
Query: 421 VCYNCRKKGHVAKHCHN 437
C+ C +GH K C N
Sbjct: 248 SCFFCGAEGHKKKQCTN 264
>gi|330928469|ref|XP_003302278.1| hypothetical protein PTT_14027 [Pyrenophora teres f. teres 0-1]
gi|311322506|gb|EFQ89660.1| hypothetical protein PTT_14027 [Pyrenophora teres f. teres 0-1]
Length = 174
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 86 RINDDGDSIIC-KLSNKRTVAIQEFKGRAFVSIREYFRRD-GKLVPTAKGIALTSEQWRA 143
+ +D+GD + S KR + + +F VSIREY+ D G++ P KGI+LT +Q+
Sbjct: 54 KTDDNGDIYVALNTSGKRRLTVSDFNKSILVSIREYYTTDSGEMRPGKKGISLTIDQYNT 113
Query: 144 FSKSLPAIDEAVVKMQ 159
+ P I EA +K +
Sbjct: 114 LLAAAPLI-EATLKKK 128
>gi|147782026|emb|CAN63196.1| hypothetical protein VITISV_035792 [Vitis vinifera]
Length = 1179
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 105/276 (38%), Gaps = 47/276 (17%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +FNG ++ W QIE L K+ P++ P++ E +W
Sbjct: 11 IEKFNGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPESMKVE---------EWALL 55
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ I LS + + K ++A +L + L +Y K +KK +M +
Sbjct: 56 DRQVLGVIRLTLSRSVXHNVVKEKTTA-DLMKALSGMYEKXSANNKVHLMKKLFNLKMAE 114
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM-------- 360
SV + E N I + +++ + + + L+ LP SW + MRM
Sbjct: 115 NASVAQHLNEFNTITNQLLSVEIDFDDEIRALIXLASLPNSW-----EAMRMAVSNSTGN 169
Query: 361 EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKT- 419
E L + + D I AEE R + S A+N R + ++ + +S+
Sbjct: 170 EKLKYNDIRDLILAEEIRRRDASETSGS-----GSALNLETRGKGNNRNSNQGRSNSRNS 224
Query: 420 ------------VVCYNCRKKGHVAKHCHNKRLHQE 443
V C+NC K GH + C + + E
Sbjct: 225 NQNISKSRSGQXVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|403157800|ref|XP_003890781.1| hypothetical protein PGTG_20589 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375163556|gb|EHS62464.1| hypothetical protein PGTG_20589 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 998
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 95/245 (38%), Gaps = 18/245 (7%)
Query: 196 NYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHH 255
NY W+ + L L+ LK+AYVL P T+ P+ ++ K+ W ND+
Sbjct: 33 NYLDWSFVVLLHLQSLKLAYVLK-PEDATTIEPKTTTAAA---KSRPSSWANDSIAVSSF 88
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD---EKSV 312
I + ++A +W L + D G + +++ + ++ E +
Sbjct: 89 IARTIHPSNLRFVRAHGTNAAAMWVSLSQAHQDFSSGGRMHWLRQLVVARLSGDDIESHI 148
Query: 313 FEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMDHI 372
A+ ++ + + ++ H + +L+ L W LM + +T + ++ +
Sbjct: 149 EAMAICAERLGSLVTPEKPLTVDDIHATALLTSLTDDWLPCVSALMNEDAVTSSRIVSAL 208
Query: 373 KAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVA 432
KAE R +E S V + A R+R +K + C C + GH
Sbjct: 209 KAESLRRKARCDDESSVSVSKARAEPDKGRLRY-----------NKALHCTFCNRSGHDL 257
Query: 433 KHCHN 437
C N
Sbjct: 258 TVCQN 262
>gi|147777716|emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera]
Length = 1183
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 32/253 (12%)
Query: 193 NGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTR-VKAAERKWLNDNNI 251
NG NY VW ++E LL K Y+L A + + R V R+W+++N
Sbjct: 12 NGSNYHVWKGKMEDLL-YAKDYYLLVFASEKPENKTDAKWDLLHRHVCGYIRQWVDNN-- 68
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKS 311
+LN +S+ + A+ LW +L+ +Y + K +KK I + DE +
Sbjct: 69 ----VLNHVSEEKH---------ARSLWNKLEQLYARKTGNNKLFLIKKMISLKYQDETT 115
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--------MRMEYL 363
+ + I + +V + E +L L SW+ F L M M+ +
Sbjct: 116 MTDHLNTFQGIINQLVRMNIKFEEEMQGLWLLGTLSDSWETFRTSLSNSAPDGTMNMDLV 175
Query: 364 TFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDS-KTVVC 422
+L + + + + S +K E S + GP R+ RR+S+ + V C
Sbjct: 176 KSCVLNEEMGRKSQGSSSQLDVLVTKKKERSKSR--GPNNRD----RRKSKTNKFANVEC 229
Query: 423 YNCRKKGHVAKHC 435
+ KGH+ K+C
Sbjct: 230 HYFHLKGHIVKYC 242
>gi|77551394|gb|ABA94191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1060
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 105/266 (39%), Gaps = 68/266 (25%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W ++ L L +K +V T P ++T Q EE T +
Sbjct: 12 KFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPEGVLTAEQQKQFEEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C IL+ L D L ++ +++M D
Sbjct: 64 --C---ILSVLGDRLV----------------------------------EFHDYKMADN 84
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTM 367
+SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY +
Sbjct: 85 RSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY-SVEG 143
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV------- 420
L+ + EE++R +++ SK + N + + SK + +++ +
Sbjct: 144 LIASLDVEEKAR---EKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNN 200
Query: 421 -------VCYNCRKKGHVAKHCHNKR 439
C+ C + GH+ + C ++
Sbjct: 201 NPNQDERTCFVCGQVGHLDRKCPQRK 226
>gi|116179834|ref|XP_001219766.1| predicted protein [Chaetomium globosum CBS 148.51]
gi|88184842|gb|EAQ92310.1| predicted protein [Chaetomium globosum CBS 148.51]
Length = 156
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRD-GKLVPTAKGIALTSEQWRAFSKSLPAIDEAVV 156
+ N R + +KG V+IRE++ G+L P KGI+LT +Q+ A K +P ++E
Sbjct: 47 IGNNRRIGPTRYKGVTLVNIREFYTTPTGELKPAKKGISLTLDQYNALLKVIPELNE--- 103
Query: 157 KMQSKLRSES 166
KLR+E
Sbjct: 104 ----KLRAEG 109
>gi|130582|sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease
gi|20045|emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
Length = 1328
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 110/261 (42%), Gaps = 27/261 (10%)
Query: 188 ELHRFNGKN-YRVWAQQIELLLKQLKVAYVL-TDPCPIVTLCPQASSEEVTRVKAAERKW 245
E+ +FNG N + W +++ LL Q + VL D T+ + ++ R +A R
Sbjct: 7 EVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLH 66
Query: 246 LNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQ 305
L+D+ ++N + D +A+ +W L+ +Y+ + K K+
Sbjct: 67 LSDD------VVNNIIDE---------DTARGIWTRLESLYMSKTLTNKLYLKKQLYALH 111
Query: 306 MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMR------ 359
M + + N + + G+ I E ++L+ LP S+ + ++
Sbjct: 112 MSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIE 171
Query: 360 MEYLTFTMLMDH-IKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSK 418
++ +T +L++ ++ + E++ E + N+G R ++ + ++ S+
Sbjct: 172 LKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYG---RSGARGKSKNRSKSR 228
Query: 419 TVVCYNCRKKGHVAKHCHNKR 439
CYNC + GH + C N R
Sbjct: 229 VRNCYNCNQPGHFKRDCPNPR 249
>gi|147810948|emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
Length = 947
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 10/188 (5%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQ 315
I+ L D + + +K +A ELW +L+ +Y+ + + + K F++ S+ E
Sbjct: 107 IILSLGDTMLREVAKAKPTA-ELWLKLESLYMTKSLANRLHKKIKLYTFKITPGMSIEEH 165
Query: 316 ALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKAE 375
NKI + + + ++L+ L S+ + +M Y +M D +++
Sbjct: 166 FDHFNKIILDLENIDITVSNEDKAILLLTSLDASYTNMKEAIM---YGRDSMTFDEVQSI 222
Query: 376 EESRSHNKQEEPSKFVELSPAVNFGPRMREMSKK----RRESEMDSKTVVCYNCRKKGHV 431
R KQEE E +N R + KK + +S+ ++K C+ C K+GH
Sbjct: 223 LHPRELQKQEESKD--ESGEGLNIRGRYDKREKKCKNLKAKSKSNTKKFKCFICHKEGHF 280
Query: 432 AKHCHNKR 439
K C +KR
Sbjct: 281 KKDCSDKR 288
>gi|13129472|gb|AAK13130.1|AC083945_5 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1363
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 107/277 (38%), Gaps = 73/277 (26%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLN 247
+LH F+G NY+ W + L + E K+
Sbjct: 201 KLHAFDGSNYKRWKARALFWLTE-------------------------------EDKFEA 229
Query: 248 DNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMF 307
+ + R +++ L++++ Y S K++W L+ +F+M
Sbjct: 230 TDYLFREALISVLANNIVDVY-MHIPSGKDMWGVLE------------------AKFEMV 270
Query: 308 DEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYLTF 365
D++SV EQA E+ + + + + F I++KLP SW DF L R E+ +
Sbjct: 271 DDRSVVEQAHEIQMLIKELENNHCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF-SV 329
Query: 366 TMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----GPRMREMSKKRRESEMDSKTVV 421
T L+ + EE++R+ + + K +E + N P + K+ + ++ K
Sbjct: 330 TDLIGSLGIEEKARAKDNR---GKKIEGGSSANLVQKNNPHASHNNNKKVKPDVKPKATT 386
Query: 422 -------------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 387 NFKKKGKGKAKGDCFVCGKPGHWAKDCPERKDKKSAN 423
>gi|77553503|gb|ABA96299.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 245
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 66/133 (49%), Gaps = 12/133 (9%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
H F+G NY+ W + L L ++ YV P S EE E K+ +
Sbjct: 105 HAFDGSNYKRWKARALLWLTAMQCFYVSRGK----RSEPPLSPEE-------EAKFEASD 153
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
+ R +++ L+D++ Y S K++W+ L+ + + G++ ++++ +++M D+
Sbjct: 154 CLFRGALISVLADNIVDVY-MHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDYKMVDD 212
Query: 310 KSVFEQALELNKI 322
+SV EQA E+ +
Sbjct: 213 RSVVEQAHEIQML 225
>gi|147837143|emb|CAN61554.1| hypothetical protein VITISV_028479 [Vitis vinifera]
Length = 1144
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 39/252 (15%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPI-VTLCPQASSEE-----VTRVKAAERKW 245
NG NY VW ++E LL YV P+ + P+ ++ +V ++W
Sbjct: 11 LNGSNYHVWKGKMEDLL------YVQDYYLPVFASEKPENKTDAEWNLLHRQVCGYIKQW 64
Query: 246 LNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQ 305
++DN +LN +S+ K T S LW +LK +Y + K +KK I +
Sbjct: 65 VDDN------VLNHVSE------EKHTWS---LWNKLKQLYARKIGNNKLFFIKKMISLK 109
Query: 306 MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTF 365
D + + I + +V + E +L LP SW+ F L L
Sbjct: 110 YQDGTPMIDHLNTFQGIINQLVGMNIKFEEEVQGLWLLGTLPDSWERFRTSLSN-SALGG 168
Query: 366 TMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSK--TVVCY 423
TM MD +K+ S Q + + + + P+ R+ SK M +K V C+
Sbjct: 169 TMNMDLVKSCGSS----SQSDVLVTEKRGRSKSRSPKNRDRSK-----SMTNKFSNVECH 219
Query: 424 NCRKKGHVAKHC 435
C KG + K+C
Sbjct: 220 YCHLKGLIRKYC 231
>gi|407038545|gb|EKE39180.1| transcriptional coactivator, putative [Entamoeba nuttalli P19]
Length = 150
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 90 DGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLP 149
+GD + +L ++ V + +FKG ++ +RE++ RDG+L P KGI+L ++ ++
Sbjct: 85 EGDKYV-QLGERKYVRLNQFKGTKYIDVREFYERDGELKPGQKGISLKDYEFEELVNNID 143
Query: 150 AI 151
I
Sbjct: 144 KI 145
>gi|167515870|ref|XP_001742276.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778900|gb|EDQ92514.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 102 RTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQS 160
R + I +F+ + + +IRE+++ R + PT KG LT +QW +PA+D A+ ++
Sbjct: 149 RRLTISDFRDKLYYNIREFYKDRSDEWKPTKKGCMLTEDQWSKLMDVVPALDAAIAELSE 208
Query: 161 K 161
K
Sbjct: 209 K 209
>gi|308800744|ref|XP_003075153.1| transcriptional coactivator p15 (ISS) [Ostreococcus tauri]
gi|116061707|emb|CAL52425.1| transcriptional coactivator p15 (ISS), partial [Ostreococcus tauri]
Length = 358
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 68 NRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKL 127
++IEP +E + + ++C++S R ++ ++KG ++IREY+ ++G++
Sbjct: 276 DKIEPAIETCD---------GSGAEVLVCEMSKMRRCSVSKYKGAVLLNIREYYEKNGQI 326
Query: 128 VPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
+P KG AL+ + + IDE + +
Sbjct: 327 LPGFKGTALSKDAAMRLVVTAAKIDERLASL 357
>gi|147809553|emb|CAN71207.1| hypothetical protein VITISV_030632 [Vitis vinifera]
Length = 902
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 180 SPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVK 239
SPL L + + NGKNYR WAQ I+L++ + + LT + T V
Sbjct: 30 SPLHL---TVEKLNGKNYRKWAQAIKLVIDRKRKLGFLTG---------ETWRSPPTDVV 77
Query: 240 AAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVK 299
A++ KW ++N+ ++N + + Y S+AK++W+ ++ Y D E ++ ++K
Sbjct: 78 ASQ-KWRSENSFITSCLINSMKPAIGKTYV-FLSTAKDVWDAIRETYFDIENASQNFEIK 135
>gi|226500000|ref|NP_001150428.1| retrotransposon protein [Zea mays]
gi|195639184|gb|ACG39060.1| retrotransposon protein [Zea mays]
Length = 274
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 109/266 (40%), Gaps = 48/266 (18%)
Query: 196 NYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHH 255
+Y WA ++E +L + ++ P + EV VK N R
Sbjct: 37 SYTAWAIKVESILDAQGLWEAVSPP----------DNGEVNAVK---------NKTARAQ 77
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLD-EEFGTKRSQVKK--YIEFQMFDEKSV 312
+L L D + Q S + ++A E+W LK ++ + T R K + + M DE+++
Sbjct: 78 LLQALPDDILMQVSIKKTAA-EVWASLKTRFVGADRVKTARLATLKGEFDKLYMEDEEAL 136
Query: 313 FEQALELNKIADSIVAAGMMIYENFHVSVILSKLP-------LSWKDFCIKLMRMEYLTF 365
+ A +++ +A G + + V +L +P + FC +E + F
Sbjct: 137 DDYAGKISGMAARYAGLGATLDDAAMVKKLLDTVPDRLFPVVAGIEQFC----DVETMPF 192
Query: 366 TMLMDHIKAEEES---RSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVC 422
+ +KA +E R+H E + L+ A ++K+++S + C
Sbjct: 193 EEALGRLKAFDERSRRRTHAGGERRDDQLLLTEA-------EWKARKKKKSTIGK----C 241
Query: 423 YNCRKKGHVAKHCHNKRLHQEINDNC 448
+NC +GH A+ C K+ + + N
Sbjct: 242 FNCGNRGHFARDCPKKKEEEALLANA 267
>gi|321251041|ref|XP_003191940.1| hypothetical protein CGB_B1430W [Cryptococcus gattii WM276]
gi|317458408|gb|ADV20153.1| Hypothetical Protein CGB_B1430W [Cryptococcus gattii WM276]
Length = 143
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFR--RDGKLVPTAKGIALTSEQWRAF 144
NDDG+ K+ +R + ++ FKG+ V IRE ++ G L P +KGI+LT+EQ AF
Sbjct: 84 NDDGEEFF-KVQYRR-LTVRTFKGKTLVDIREMYKDKSSGALKPGSKGISLTAEQVSAF 140
>gi|147825155|emb|CAN75500.1| hypothetical protein VITISV_034155 [Vitis vinifera]
Length = 405
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 103/270 (38%), Gaps = 47/270 (17%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+ + +F+G ++ W QIE L K+ P++ P++ +KA E L
Sbjct: 9 SGIEKFDGTDFAYWRMQIEDYLYGRKL------HLPLLGTKPES-------MKAEEWALL 55
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+ + + LS + + K ++ +L + L +Y K +KK +M
Sbjct: 56 DRQVLGVIRLT--LSRSIAHNVVKEKTTT-DLMKALSGMYEKPSANNKVHLMKKLFNLKM 112
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM------ 360
+ SV + E N I + + + + + H ++L+ LP SW + MRM
Sbjct: 113 AENASVAQHLNEFNTITNQLSSVEIEFDDEIHALIVLASLPNSW-----EAMRMAVSNST 167
Query: 361 --EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES----- 413
E L + + D I EE R + S A+N R R +K +
Sbjct: 168 GKEKLKYNDIRDLILVEEIRRRDAGETSGS-----GSALNLETRGRGNNKNSNQGRSNSR 222
Query: 414 --------EMDSKTVVCYNCRKKGHVAKHC 435
+ V C+NC K GH + C
Sbjct: 223 NSNRNRSKSRSGQQVQCWNCGKTGHFKRQC 252
>gi|242079171|ref|XP_002444354.1| hypothetical protein SORBIDRAFT_07g020570 [Sorghum bicolor]
gi|241940704|gb|EES13849.1| hypothetical protein SORBIDRAFT_07g020570 [Sorghum bicolor]
Length = 239
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 193 NGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNIC 252
Y W + + L + L VAYVL+ +A AA +KW D+ +C
Sbjct: 55 GAGGYLRWKESLLLRVHTLGVAYVLS----------EAPPAGAGGHDAAAKKWARDDAVC 104
Query: 253 RHHILNFLSDHLYYQYSKRTSSA 275
R HIL LSD L Y++ ++A
Sbjct: 105 RGHILRTLSDRLLPDYARFATAA 127
>gi|449016693|dbj|BAM80095.1| similar to RNA polymerase II transcriptional coactivator
[Cyanidioschyzon merolae strain 10D]
Length = 103
Score = 45.4 bits (106), Expect = 0.062, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 102 RTVAIQEFKGRAFVSIREYFR--RDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
R V +++++G+ V IREY+R + G+ +P KGI+LT +Q+R+ LP I+ A+
Sbjct: 41 RRVMVRKYRGQVLVDIREYYRDAKTGEELPGRKGISLTMKQFRSLQTLLPDIEVAL 96
>gi|3402755|emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
gi|7268932|emb|CAB79135.1| putative transposable element [Arabidopsis thaliana]
Length = 1308
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 27/271 (9%)
Query: 187 TELHRFNG-KNYRVWAQQIE-----LLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKA 240
E+ FNG +++ +W +IE L LK + LT +V + S E +
Sbjct: 7 VEIKTFNGDRDFSLWKIRIEAQLGVLGLKPALSDFTLTKTILVVKSEKKESESEDDETDS 66
Query: 241 AERKWLND------NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTK 294
+ + + D ++ ++ I+N ++D + + + +A ELW L ++++ +
Sbjct: 67 KKTEEVPDPIKFEQSDQAKNFIINHITDTVLLKV-QHCVTAAELWATLNKLFMETSLPNR 125
Query: 295 RSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFC 354
+ F+M D S+ + E +I + + + + E +IL+ LP S+
Sbjct: 126 IYTQLRLYSFKMVDNLSIDQNTDEFLRIVAELGSLQIQVGEEVQAILILNSLPPSY---- 181
Query: 355 IKLMR-MEYLTFTMLMDHIKAEEES--RSHNKQEEPSKFVELSPAVNFGPRMREMSK--- 408
I+L ++Y T+ + + + +S R ++Q+E + S A+ R R +K
Sbjct: 182 IQLKHTLKYGNKTLSVQDVVSSAKSLERELSEQKETIR-APASTALYTAERGRPQTKNTQ 240
Query: 409 ---KRRESEMDSKTVVCYNCRKKGHVAKHCH 436
K R + C+ C+K+GHV K C+
Sbjct: 241 GQGKGRGRSNSKSRLTCWFCKKEGHVKKDCY 271
>gi|209552794|gb|ACI62137.1| polyprotein [Drosophila melanogaster]
Length = 1319
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 115/265 (43%), Gaps = 22/265 (8%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLN 247
++ + NY VW+ +L++ + + L + P+ SE+ R ++K L
Sbjct: 6 QIEKLGDDNYDVWS----ILMRSVLITADLWKVVCGQYVKPEDGSEDSERWNMLDQKALA 61
Query: 248 DNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMF 307
LN L + K +++ + W++L V+L K +K +M
Sbjct: 62 S------LFLNLKETQL--MHIKACTTSADAWKKLCDVHLPGGPIRKVQLYQKLSRLRML 113
Query: 308 DEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYL-TFT 366
+ +V + + + + + + I + ++LS LP SW++F + + + L TF
Sbjct: 114 EGDNVVQYVNKFAETVNKLAEMDITINDELKSIMLLSSLPNSWENFVVAIETRDTLPTFE 173
Query: 367 MLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMD----SKTVVC 422
+ +K EE ++++ V+ AV ++ +K+++ E + S C
Sbjct: 174 TV--KVKLLEEGARKQERDDREGSVQ---AVYVHTKLHGTAKQKQREENNLEKHSFKGKC 228
Query: 423 YNCRKKGHVAKHCHNKRLHQEINDN 447
Y C K GH A+ C NK H+++ ++
Sbjct: 229 YICEKFGHRARECPNKGRHKKLGES 253
>gi|302306652|ref|NP_983039.2| ABR093Cp [Ashbya gossypii ATCC 10895]
gi|299788620|gb|AAS50863.2| ABR093Cp [Ashbya gossypii ATCC 10895]
gi|374106242|gb|AEY95152.1| FABR093Cp [Ashbya gossypii FDAG1]
Length = 214
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRRD--GKLVPTAKGIALTSEQWRAFSKSLP 149
D++ +L + V +++F+ V IREY++ G++ P KGI+LT EQ+ +
Sbjct: 47 DNVFFELGKNKRVTVRQFRNINLVDIREYYQESATGEMKPGKKGISLTEEQYDELLQHRG 106
Query: 150 AIDEAVVKMQSKLRSESSGE 169
IDEA+ S R E
Sbjct: 107 QIDEALRSFGSARRRSPPAE 126
>gi|147776056|emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]
Length = 1204
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 41/201 (20%)
Query: 243 RKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI 302
R+W++DN +LN +S + A+ LW +L+ +Y + K +KK +
Sbjct: 40 RQWVDDN------VLNHVS---------KEKHARSLWNKLEQLYARKTGNNKLFLIKKMM 84
Query: 303 EFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL----- 357
+ D + + I + + + E +L LP SW+ F L
Sbjct: 85 SLKYQDGTPMTDHLNTFQGIINQLARMNIKFEEEVQGLWLLGTLPDSWETFRTSLSNSAP 144
Query: 358 --MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEM 415
MR + + + + E+ RS +K GP+ R+ SK +
Sbjct: 145 DEMRRKSQGSSSQSNVLVTEKRGRSKSK----------------GPKNRDRSKSKTNKFA 188
Query: 416 DSKTVVCYNCRKKGHVAKHCH 436
+ V C+ C KGH+ K+CH
Sbjct: 189 N---VECHYCHLKGHIKKYCH 206
>gi|353235574|emb|CCA67585.1| hypothetical protein PIIN_01413 [Piriformospora indica DSM 11827]
Length = 143
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 90 DGDS--IICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQW 141
DGD I R V I+EFKG+ +V IRE++ ++ + P KGI+LT E+W
Sbjct: 68 DGDEKWITVGTKGTRRVTIREFKGKTYVDIREFYVDKQTSESKPGKKGISLTVEEW 123
>gi|6623973|gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 124/274 (45%), Gaps = 31/274 (11%)
Query: 188 ELHRFNG-KNYRVWAQQIELLLKQLKVAYVLTD--PCPIVTLCPQASSEEVTRVKAAERK 244
E+ FNG +++ +W +I+ L L + LTD V L + +E +++ K
Sbjct: 9 EIKVFNGDRDFSLWKIRIQAQLGVLGLKDTLTDFSLTKTVPLTKSEAKQESGDGESSGTK 68
Query: 245 WLND------NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
+ D + ++ I+N +SD + + + ++A +LW L Y++ +
Sbjct: 69 EVPDPVKIEQSEQAKNIIINHISDVVLLKVNHYATTA-DLWATLNKKYMETSLPNRIYTQ 127
Query: 299 KKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLM 358
K F+M ++ + E +I + + + + E +IL+ LP S I+L
Sbjct: 128 LKLYSFKMVSTMTIDQNVDEFLRIVAELGSLEIQVDEEVQAILILNSLPAS----HIQLK 183
Query: 359 R-MEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELS---PAVNFG-----PRMREMSKK 409
++Y T+ + + + +S + E ++ V+L AV + P +R K
Sbjct: 184 HTLKYGNKTLTVQDVTSSAKSL----ERELAEAVDLDKGQAAVLYTTERGRPLVRNNQKG 239
Query: 410 ---RRESEMDSKT-VVCYNCRKKGHVAKHCHNKR 439
+ S +SKT V C+ C+K+GHV K C++++
Sbjct: 240 GQGKGRSRSNSKTKVPCWYCKKEGHVKKDCYSRK 273
>gi|444727520|gb|ELW68008.1| Activated RNA polymerase II transcriptional coactivator p15 [Tupaia
chinensis]
Length = 151
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ R V++++FKG+ REY+ +G++ P KGI+ EQW+ + +
Sbjct: 60 DDNMFQIGKMRHVSVRDFKGKVLTDTREYWMDPEGEMKPGRKGISSDPEQWKQLKEQISD 119
Query: 151 IDEAVVKMQS 160
ID+ + K+ S
Sbjct: 120 IDDVLRKLTS 129
>gi|147825453|emb|CAN73240.1| hypothetical protein VITISV_035336 [Vitis vinifera]
Length = 1244
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 107/278 (38%), Gaps = 47/278 (16%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+ + +F+G ++ W QIE L K+ P++ P++ +KA E L
Sbjct: 9 SGIEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPES-------MKAEEWALL 55
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+ + + LS + + K ++A +L + L +Y K +KK +M
Sbjct: 56 DRQVLGVIRLT--LSRSVAHNVVKEKTTA-DLMKALSGMYEKPSANNKVHLMKKLFNLKM 112
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM------ 360
+ SV + E N I + + + + + ++L+ LP SW + MRM
Sbjct: 113 AENASVXQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSW-----EAMRMAVSNSX 167
Query: 361 --EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES----- 413
E L + + D I AEE R + S A+N R R +K +
Sbjct: 168 GKEKLKYNDIRDLILAEEIRRRDAGETSGS-----GSALNLEXRGRGNNKNSNQGRSNSR 222
Query: 414 --------EMDSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C + + E
Sbjct: 223 NSNRNRSKSRSXQQVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|363749277|ref|XP_003644856.1| hypothetical protein Ecym_2297 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888489|gb|AET38039.1| Hypothetical protein Ecym_2297 [Eremothecium cymbalariae
DBVPG#7215]
Length = 266
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFR--RDGKLVPTAKGIALTSEQWRAFSKSLP 149
D+I +L + V +++F+ V IREY++ G++ P KGI+LT EQ+ +
Sbjct: 51 DNIFFELGKNKRVTVRQFRNINLVDIREYYQDAGTGEMKPGKKGISLTEEQYDELLHNRF 110
Query: 150 AIDEAVVKMQSK 161
ID+A+ + SK
Sbjct: 111 QIDDALRQFGSK 122
>gi|389741518|gb|EIM82706.1| PC4-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 151
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 83 IGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWR 142
I + N +G+ I L KR ++++K V IRE++ G P KGI+LT +QW+
Sbjct: 76 IAVQTNYEGEKFI-DLGKKRRATVRKYKSAVLVDIREFYGEAGDEKPGKKGISLTVDQWQ 134
Query: 143 AFSKSLPAIDEAVVKMQ 159
+ ++ ID + K +
Sbjct: 135 SLREASDTIDSLIAKAK 151
>gi|4558683|gb|AAD22700.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 119
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRS 296
R A+ W + + +C+ +I + LSD LY YS ++ ELW+ L Y ++ G+++
Sbjct: 31 RALASVHAWEHGDFMCKGYIQSRLSDPLYNVYS-NVETSNELWDSLDKKYQTKDAGSQKY 89
Query: 297 QVKKYIEFQMFDEKSVFEQALEL 319
K+++++M D + + Q EL
Sbjct: 90 AAAKFLDYKMVDSRPMMVQVEEL 112
>gi|147766319|emb|CAN65522.1| hypothetical protein VITISV_031371 [Vitis vinifera]
Length = 935
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 102/277 (36%), Gaps = 57/277 (20%)
Query: 180 SPLELFPTELHRFNGKNYRVWAQQIELLL-KQLKVAYVLTD---PCPIVTLCPQASSEEV 235
SPL L + + NGKNYR WAQ I+L++ K+ + + + P PI
Sbjct: 36 SPLHL---TVEKLNGKNYREWAQAIKLVIDGNGKLGFFIGETRRPPPIDV---------- 82
Query: 236 TRVKAAERKWLNDNNICRHHILNFLSDHL--YYQYSKRTSSAKELWEELKLVYLDEEFGT 293
A +KW ++N+ ++N + + Y + T LW++L L +EE+
Sbjct: 83 ----ATSQKWRSENSFITSCLINSMKPAIGKTYMFLSTTKDMLGLWQDLDL-NCEEEWEC 137
Query: 294 KRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
V+ F +K E+A + L+ L D
Sbjct: 138 TGDSVR-------FKKKMENERAFDF-----------------------LTGLNHELDDV 167
Query: 354 CIKLMRMEYLTFTM-LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRE 412
I+++ L F + ++ EE R +E S E S V GP
Sbjct: 168 RIRVLSRRSLPFIREVFSEVRQEENRRRVMLREHLSFGPEASALVICGPHAGSGGPHSGS 227
Query: 413 SEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEINDNCP 449
SK C +C+K GH C LH + D P
Sbjct: 228 GPRQSKRTYCEHCKKLGHTKDTCWT--LHGKPADWKP 262
>gi|449445194|ref|XP_004140358.1| PREDICTED: uncharacterized protein LOC101207977 [Cucumis sativus]
Length = 184
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV 238
+S ++L +E + NG NY W + ++ + +VLT+ CP P +++ +R
Sbjct: 3 SSIVQLLASE--KLNGDNYAAWKSNLNTIVVVDDLRFVLTEECP---QNPASNANRTSR- 56
Query: 239 KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
A +W+ N R +IL +SD L ++ + ++AKE+ L+ ++ E + V
Sbjct: 57 -DAYDRWIKANEKARVYILASMSDVLAKKH-ESLATAKEIMNSLRGMFGQPELSLRHEAV 114
Query: 299 KKYIEFQMFDEKSVFEQALEL 319
K +M + SV E L++
Sbjct: 115 KYIYTKRMKEGTSVREHVLDM 135
>gi|395835158|ref|XP_003790549.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
p15-like [Otolemur garnettii]
Length = 128
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRR-DGKLVPTAKGIALTSEQWRAFSKSLPA 150
D + ++ N R +++ +FKG+ RE++ +G++ P KG +L EQW + +
Sbjct: 61 DDNMFQIGNMRYISVLDFKGKVLTDTREFWMDPEGEMKPGRKGFSLNLEQWSQLKEQISD 120
Query: 151 IDEAVVKM 158
D+AV K+
Sbjct: 121 FDDAVRKL 128
>gi|31432368|gb|AAP54011.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 417
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 118/276 (42%), Gaps = 39/276 (14%)
Query: 175 ANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE 234
A+++++ + P G N++ W + + ++L + + L PI+ S++
Sbjct: 10 ASNISASINSIPV----LTGANFKEWKENVLIVLGVMDLDLALRKEQPIL-------SDK 58
Query: 235 VTRVKAAER-KWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGT 293
T+ + E +W N + + + + S+ ++AK E L+ + E
Sbjct: 59 STKDENMEHERWDRSNRMSLMIMKRSIPEAFRDSTSEEVTTAKVFLETLQKRFARNEKAE 118
Query: 294 KRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
+ + K I + + ++ E +E++ +A + A + + E+ + +IL LP + F
Sbjct: 119 TSTLLAKLISMRYKGKGNMREYIMEMSHLASKLKALKLDLSEDLLMHLILISLPTQFNQF 178
Query: 354 CIKL-MRMEYLTFTMLMDHIKAEEES-------------RSHNKQEEPSKFVELSPAVNF 399
+ + + T L+ H EEE S+NK+ + + V++ P +
Sbjct: 179 KVSYNCQKDKWTVNKLISHCVQEEERLKQDRIESAHLSMTSNNKKRKSKEAVDVQPPL-- 236
Query: 400 GPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
K+RE+ + CY C+K+GH+ K+C
Sbjct: 237 ---------KKRENNCGEEP--CYFCKKEGHMKKNC 261
>gi|147816553|emb|CAN61880.1| hypothetical protein VITISV_018026 [Vitis vinifera]
Length = 1001
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 118/276 (42%), Gaps = 26/276 (9%)
Query: 173 DVANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASS 232
++A+S+++ + P NG N++ W + + ++L + + + L + P L +++
Sbjct: 2 NLASSISANVNNIPV----LNGTNFKKWKEHVIIVLGCMDLDFALRENRP-SDLTSASTA 56
Query: 233 EEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG 292
E+ + ++ ER I +H I + + + AK +++ + E
Sbjct: 57 EQRSTMEKWERSNRMSLMIMKHSIPEAIRGAI-----PEETQAKAFLDQIANRFAANEKV 111
Query: 293 TKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKD 352
+ + K + + ++++ E +E++ + + A + + E+ V ++L LP +
Sbjct: 112 ETNTILSKLVSMRYKGKENIMEYIMEMSNLVTRLKALKLELSEDILVHLVLISLPTQFSP 171
Query: 353 FCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGP---RMRE--- 405
F I + E T L+ EEE KQE+ S + FG R R+
Sbjct: 172 FKINYNTQKEKWTLNELIAQCVQEEERL---KQEKIKSAHLASTSQGFGTNKKRKRDNIG 228
Query: 406 ------MSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
+ K+ E + K + C+ C+K GH+ K C
Sbjct: 229 KQTAVSGTSKQNEQKKQDKEITCFFCKKVGHMKKTC 264
>gi|125561580|gb|EAZ07028.1| hypothetical protein OsI_29276 [Oryza sativa Indica Group]
Length = 208
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 76/194 (39%), Gaps = 38/194 (19%)
Query: 243 RKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI 302
RKW D+ +CR HIL L D ++ Y R +A+ WE + Y + G + V +
Sbjct: 50 RKWARDDAVCRGHILAALHDRIFPDYV-RHGTARAAWEAVARAY--DGAGALSAGVAR-- 104
Query: 303 EFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEY 362
+ FD+ + + L +IA + E + + ++LPL +D L
Sbjct: 105 --RAFDDLEFYANSPLLEQIAHA---------EALNAA---TRLPLGDEDLAGTLCE--- 147
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMD-SKTVV 421
ML +++ +RS + R+ + + RR D +
Sbjct: 148 ----MLPENVGGPASARSGGGVTMRDVW-----------RVARLVETRRVCREDMERHGR 192
Query: 422 CYNCRKKGHVAKHC 435
C+ C K GH +C
Sbjct: 193 CWRCGKPGHHTSNC 206
>gi|147844383|emb|CAN82103.1| hypothetical protein VITISV_035488 [Vitis vinifera]
Length = 1152
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 180 SPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVK 239
SPL + + NGKNYR WAQ I+L V+ + + L + T V
Sbjct: 36 SPLHF---TIEKLNGKNYRAWAQAIKL---------VIDEKGKLGHLTSETRRPPPTDV- 82
Query: 240 AAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVK 299
AA +KW + N+ ++N + + Y +AK++W+ ++ Y D ++ ++K
Sbjct: 83 AASQKWRSKNSFITSCLINSMKPAIGKTY-MFLPTAKDVWDVIRETYSDAXNASQIFELK 141
Query: 300 K--YIEFQMFDEKSVFEQALELNKIADSI 326
Y+ F+ + + VF LN D +
Sbjct: 142 TRLYVRFKKMENERVFXFLAGLNCRLDDV 170
>gi|449534074|ref|XP_004173994.1| PREDICTED: uncharacterized protein LOC101229571, partial [Cucumis
sativus]
Length = 158
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 197 YRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHHI 256
Y W + +L + ++LT+ CPQ + T A +R W+ N R +I
Sbjct: 1 YAAWKSNLNTILVVDDLRFILTEE------CPQNPASNRTSRDAYDR-WIKANEKARVYI 53
Query: 257 LNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQA 316
L +SD L ++ T +AKE+ + L+ ++ E+ + VK +M + SV E
Sbjct: 54 LASMSDVLAKKHESLT-TAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKRMKEGTSVREHV 112
Query: 317 LELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
+++ + G I E VS IL LP S+ F
Sbjct: 113 MDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPF 149
>gi|42570512|ref|NP_850798.2| ssDNA-binding transcriptional regulator [Arabidopsis thaliana]
gi|332003979|gb|AED91362.1| ssDNA-binding transcriptional regulator [Arabidopsis thaliana]
Length = 138
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 65 STDNRIEPDLEVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRD 124
++D+R E E ++ K ++ D IC L R V ++ GR +++IR++F +D
Sbjct: 14 ASDDRDES--ETHAPPKKVAKPADEIEDIFICNLDKNRRVFVRNCNGRIWIAIRQFFVKD 71
Query: 125 GKLVP--TAKGIALTSEQ 140
G +P + +GI+L+ EQ
Sbjct: 72 GITLPCNSKQGISLSLEQ 89
>gi|410074447|ref|XP_003954806.1| hypothetical protein KAFR_0A02330 [Kazachstania africana CBS 2517]
gi|372461388|emb|CCF55671.1| hypothetical protein KAFR_0A02330 [Kazachstania africana CBS 2517]
Length = 218
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 94 IICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSLPAI 151
+I L + V +++F+ + IREY+ + G++ P KGI+LT + + K I
Sbjct: 35 VIFDLGKNKRVTVRQFRNINLIDIREYYMDQSTGEMKPGKKGISLTEDLYDELLKHRLNI 94
Query: 152 DEAVVKMQSK------LRSESSGEQN-------KDVANSMTSPLELFPTEL--HRFNGKN 196
DEA+ + SK +R +S GE++ D + T ++ P L H N N
Sbjct: 95 DEALRRFGSKRPRTKTVRIQSDGEEDTESHELEGDNDDGRTKKQKIAPPTLLPHEENAAN 154
Query: 197 YRVWAQQIELLLKQLKVAYVLTDPCPIV 224
+ A L++ + V T+ P+
Sbjct: 155 AKREANAT-LVIPGARKQEVKTESEPVA 181
>gi|147838590|emb|CAN76580.1| hypothetical protein VITISV_025642 [Vitis vinifera]
Length = 1046
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/267 (18%), Positives = 105/267 (39%), Gaps = 48/267 (17%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+++ FNG ++ W +++ + + + ++LTDP E+ + + W
Sbjct: 13 SKIDPFNGTFFKRWQERVFATIDVVXLGHILTDP----------KLEDGSHLLPT---WE 59
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
N RH IL+ LS ++ Y T++ + + FQM
Sbjct: 60 TRNKQVRHAILSTLSXEIFDIYY---------------------VXTQKYAIXNFRNFQM 98
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTF 365
+++ V Q + + + + + + + F S ++ L SWKD + + + ++
Sbjct: 99 MEDRDVSSQIHDYHLLINDLAIEDIKLPGPFMASYLVETLLKSWKDXXXNMKHKRKQMSL 158
Query: 366 TMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGP------------RMREMSKKRRES 413
++ HI+ EE++R+ + E+ + + V P R + + + +
Sbjct: 159 EDVIIHIRIEEQNRNRDNVEKAKELSSKANVVEEKPKPKNNRSRKQNFRTKPNASNKVQQ 218
Query: 414 EMDSKTVVCYNCRKKGHVAKHC-HNKR 439
K C+ C K H A C H KR
Sbjct: 219 STIKKRGNCFVCGKSRHHAAQCRHRKR 245
>gi|147767491|emb|CAN60203.1| hypothetical protein VITISV_036059 [Vitis vinifera]
Length = 1412
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 173 DVANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLT--DPCPIVTLCPQA 230
+V N +T L+L PT NY +W +Q L + ++ LT DP P P
Sbjct: 7 NVGNFIT--LKLSPT--------NYPLWREQALALAESQELLGHLTNEDPAPPQYTIPDF 56
Query: 231 SSEEVTRVKAAERK-----WLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLV 285
++ + A + W + + R I+ LS+ + +A ++WE LK
Sbjct: 57 NNTPTAKTSAPRKTEAYIAWRKADRLLRGWIIGTLSEETL-GLAVGLDTANDVWEALKNA 115
Query: 286 YLDE----EFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSV 341
Y ++ EF T R QV Y+ + D+K++ E + DS+ A G + + V
Sbjct: 116 YAEDSQEREF-TLRQQVT-YLRKE--DDKTIGEHIRTFKSLCDSLAAIGKPVPDKEKVFC 171
Query: 342 ILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKAEEESRS 380
+L+ L ++ F +++ +++ L+ +++ ++ R+
Sbjct: 172 LLTSLGPQYETFTTTMLKPPRPSYSELVSQLQSLDQRRN 210
>gi|147789655|emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]
Length = 1279
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 106/276 (38%), Gaps = 47/276 (17%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +F+G ++ W QIE L K+ P++ P++ +KA E L+
Sbjct: 11 IEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPES-------MKAEEWALLDR 57
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ + LS + + K ++A +L + L +Y K +KK +M +
Sbjct: 58 QVLGVIRLT--LSRSVAHNVVKEKTTA-DLMKALSGMYEKXSANNKVHLMKKLFNLKMAE 114
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM-------- 360
SV + E N I + + + + + ++L+ LP SW + MRM
Sbjct: 115 NASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSW-----EAMRMAVSNSTGK 169
Query: 361 EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES------- 413
E L + + D I AEE R + S A+N R R ++ +
Sbjct: 170 EKLKYNDIRDLILAEEIRRRDAGETSGS-----GSALNLETRGRGNNRNSNQGRSNSRNS 224
Query: 414 ------EMDSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C + + E
Sbjct: 225 NRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|403414457|emb|CCM01157.1| predicted protein [Fibroporia radiculosa]
Length = 166
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKS 147
ND+GD + L KR ++ F+ IREY+ +G P KG+ L+ EQW +S
Sbjct: 99 NDEGDKYLD-LGKKRRATVRSV----FLDIREYYGPEGDEKPGKKGVTLSQEQWNKLKQS 153
Query: 148 LPAID 152
ID
Sbjct: 154 SEVID 158
>gi|221039826|dbj|BAH11676.1| unnamed protein product [Homo sapiens]
Length = 123
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQW 141
D + ++ R V++++FKG + IREY+ +G++ P KGI+L EQW
Sbjct: 60 DDNMFQIGKMRYVSVRDFKGEVLIDIREYWMDPEGEMKPGRKGISLNPEQW 110
>gi|147791117|emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]
Length = 1222
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 107/278 (38%), Gaps = 47/278 (16%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+ + +F+G ++ W QIE L K+ P++ P++ +KA E L
Sbjct: 9 SGIEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPES-------MKAEEWALL 55
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+ + + LS + + K ++A +L + L +Y K +KK +M
Sbjct: 56 DRQVLGVIRLT--LSRSVAHNVVKEKTTA-DLMKALSGMYEKPSANNKVHLMKKLFNLKM 112
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM------ 360
+ SV + E N I + + + + + ++L+ LP SW + MRM
Sbjct: 113 AENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSW-----EAMRMAVSNST 167
Query: 361 --EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES----- 413
E L + + D I AEE R + S A+N R R ++ +
Sbjct: 168 GKEKLKYNDIRDLILAEEIRRRDAGETSGS-----GSALNLETRGRGNNRNSNQGRSNSR 222
Query: 414 --------EMDSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C + + E
Sbjct: 223 NSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|449442793|ref|XP_004139165.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Cucumis
sativus]
Length = 693
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 14/127 (11%)
Query: 191 RFN-GKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAE-RKWLND 248
RF G NY + LL +L+V ++ + +V ++++V + A + K+ +
Sbjct: 566 RFGEGLNY------LGRLLMKLRVEFLKSSTGSLVI-----TADQVKKASAIDPEKYKKN 614
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
N R H+LN +SD ++ + + SAK++ L+ Y ++ G V K ++FQM D
Sbjct: 615 NKTVRGHLLNHMSDPMFDLFVIQ-KSAKDILCILESRYGGDDTGRMNYVVGKLLQFQMID 673
Query: 309 EKSVFEQ 315
+K V EQ
Sbjct: 674 DKPVMEQ 680
>gi|66826299|ref|XP_646504.1| ssDNA-binding transcriptional regulator [Dictyostelium discoideum
AX4]
gi|60474440|gb|EAL72377.1| ssDNA-binding transcriptional regulator [Dictyostelium discoideum
AX4]
Length = 129
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQ 140
LS+KR ++ FKG + IRE+F + G+L P++KGI+LT EQ
Sbjct: 67 LSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQ 110
>gi|2443320|dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 104/268 (38%), Gaps = 36/268 (13%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLN 247
E + NG N+ W + + ++LKQ + YVL P P + + + K N
Sbjct: 17 EKEKLNGTNFMDWYRNLRIVLKQERKEYVLEVPYP-----EELPNNATATARRGFEKHTN 71
Query: 248 DNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVY----LDEEFGTKRSQVKKYIE 303
D +L +S L QY +S A + L+ ++ DE F T +S
Sbjct: 72 DALDISCLMLATMSPELQKQY--ESSDAHTTIQGLRGMFENQARDERFNTSKS----LFA 125
Query: 304 FQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEY 362
++ + V +++ +S+ G + + VIL LP S++ F + M
Sbjct: 126 CRLVEGNPVSPHVIKMIGYIESLEKLGFPLSQELATDVILQSLPPSFEPFILNYHMNNMD 185
Query: 363 LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRR--ESEMDSKT- 419
T L +K EES N V + P ++++ KR+ E+ S +
Sbjct: 186 RTLAELHGMLKTVEESIQKNGHH-----VMMMQNAKRKPPVKKLCTKRKLTPDEIASASN 240
Query: 420 ------------VVCYNCRKKGHVAKHC 435
VC+ C++ GH ++C
Sbjct: 241 AKKGKKGSAASDAVCFYCKETGHWKRNC 268
>gi|147827119|emb|CAN62181.1| hypothetical protein VITISV_044399 [Vitis vinifera]
Length = 1264
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 107/278 (38%), Gaps = 47/278 (16%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+ + +F+G ++ W QIE L K+ P++ P++ +KA E L
Sbjct: 9 SGIEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPES-------MKAEEWALL 55
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+ + + LS + + K ++A +L + L +Y K +KK +M
Sbjct: 56 DRQVLGVIRLT--LSRSVAHNVVKEKTTA-DLMKALSGMYEKPSANNKVHLMKKLFNLKM 112
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM------ 360
+ SV + E N I + + + + + ++L+ LP SW + MRM
Sbjct: 113 AENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSW-----EAMRMAVSNST 167
Query: 361 --EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES----- 413
E L + + D I AEE R + S A+N R R ++ +
Sbjct: 168 GKEKLKYNDIRDLILAEEIRRRDAGETSGS-----GSALNLETRGRGNNRNSNQGRSNSR 222
Query: 414 --------EMDSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C + + E
Sbjct: 223 NSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|66820016|ref|XP_643662.1| ssDNA-binding transcriptional regulator [Dictyostelium discoideum
AX4]
gi|60471778|gb|EAL69733.1| ssDNA-binding transcriptional regulator [Dictyostelium discoideum
AX4]
Length = 141
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFR-RDGKLVPTAKGIALTSEQW 141
LS+KR ++ FKG + IRE+F + G+L P++KGI+LT EQ+
Sbjct: 79 LSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQF 123
>gi|397632276|gb|EJK70483.1| hypothetical protein THAOC_08153, partial [Thalassiosira oceanica]
Length = 107
Score = 43.9 bits (102), Expect = 0.18, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFK---GRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAF 144
ND+GD+ + +LS+K+ I++++ V IRE + +DGK +P KGI+LT Q++A
Sbjct: 36 NDEGDAYV-ELSSKKRCTIRKYRKYRNSVLVDIREMYEKDGKTLPGKKGISLTVAQYQAL 94
Query: 145 SKSL 148
+ ++
Sbjct: 95 AAAI 98
>gi|147818439|emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]
Length = 1409
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Query: 191 RFNGKNYRVWAQQIELLLK-QLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +G NY +W+Q +E+ + + K+ Y+ D P P+ T A RKW +
Sbjct: 50 KLDGTNYALWSQIVEMYISGKDKLGYINGDFPQPLQT-------------DPAFRKWRTE 96
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
N + + ++N + L + S AK +W+ + + Y D GT SQV
Sbjct: 97 NAVVKGWLINSMDPKLVSNFIX-FSXAKAVWDNIAITYFD---GTDTSQV 142
>gi|147821418|emb|CAN76896.1| hypothetical protein VITISV_010605 [Vitis vinifera]
Length = 1146
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 106/276 (38%), Gaps = 47/276 (17%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +F+G ++ W QIE L K+ P++ P++ +KA E L+
Sbjct: 11 IEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPES-------MKAEEWALLDR 57
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ + LS + + K ++A +L + L +Y K +KK +M +
Sbjct: 58 QVLGVIRLT--LSRSVAHNVVKEKTTA-DLMKALSGMYEKXSANNKVHLMKKLFNLKMXE 114
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM-------- 360
SV + E N I + + + + + ++L+ LP SW + MRM
Sbjct: 115 NASVAQHLBEFNTITNQLSSXEIDFDDEIRALIVLASLPNSW-----EAMRMVVSNSTGK 169
Query: 361 EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES------- 413
E L + + D I AEE R + S A+N R R ++ +
Sbjct: 170 EKLKYNDIRDLILAEEIRRRDAGETSGS-----GSALNLETRGRGNNRNTNQGRSNSRNS 224
Query: 414 ------EMDSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C + + E
Sbjct: 225 NRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|72034836|ref|XP_799259.1| PREDICTED: uncharacterized protein LOC594736 [Strongylocentrotus
purpuratus]
gi|390346761|ref|XP_003726618.1| PREDICTED: uncharacterized protein LOC100887956 [Strongylocentrotus
purpuratus]
Length = 187
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFR------RDGKLVPTAKGIALTSEQWRAFSKSLPAI 151
L +R ++ ++G +++IREY++ +++P +GI LT++ W +KS+ +I
Sbjct: 115 LGGQRYAVVKNYRGVTYIAIREYYKDKKSKNTPDRMLPGIRGINLTADNWWQMTKSIMSI 174
Query: 152 DEAV 155
+AV
Sbjct: 175 SDAV 178
>gi|242079157|ref|XP_002444347.1| hypothetical protein SORBIDRAFT_07g020530 [Sorghum bicolor]
gi|241940697|gb|EES13842.1| hypothetical protein SORBIDRAFT_07g020530 [Sorghum bicolor]
Length = 221
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 193 NGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNIC 252
Y W + + L L + VA+VL+D P A++ K KW D+ +C
Sbjct: 11 GADGYLRWKESMLLRLHSVGVAHVLSDDPPAPAEAAGAAAAAAAAAK----KWARDDAVC 66
Query: 253 RHHILNFLSDHLYYQYSKRTSSAKELWEELKLVY-LDEEFGTKRSQVKKYIEFQMFDEKS 311
R HIL LSD ++ Y R + + +W+ + Y +D+ + Q ++++ F+E +
Sbjct: 67 RGHILYALSDRIFPDYV-RHGTGRAVWQAVARTYDVDKPRRSYSRQYERFLHRFRFEEGA 125
Query: 312 VFEQALELNKIADSIVAA-GMMIYENFHVSVILSKLP 347
LE A+++VA ++ S I KLP
Sbjct: 126 S-SSFLEQLAHAEALVATRDPPPSDDTMASWIWDKLP 161
>gi|356570189|ref|XP_003553273.1| PREDICTED: heat stress transcription factor A-6a-like [Glycine max]
Length = 202
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 80 RAQIGKRINDDGDSI-ICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKG 133
+ + K +DD DSI IC++SN + V+++++KG V I E++ +DGK + KG
Sbjct: 27 KKSLKKDYDDDPDSITICEISNNKRVSVRKWKGNIMVDIHEFYIKDGKQLAGRKG 81
>gi|384485566|gb|EIE77746.1| hypothetical protein RO3G_02450 [Rhizopus delemar RA 99-880]
Length = 126
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFK-GRAFVSIREYFR--RDGKLVPTAKGIALTSEQWRAF 144
+D GD I +LS KR V ++ F G V IRE+++ G++ P GI QW
Sbjct: 51 DDKGDQIF-ELSAKRRVTVRLFSTGEPSVDIREFYKDKNTGEMRPGKAGICFPLAQWHKL 109
Query: 145 SKSLPAIDEAVVKMQSK 161
+ +P IDEA+ ++ K
Sbjct: 110 KELIPDIDEAIEAIKKK 126
>gi|409047835|gb|EKM57314.1| hypothetical protein PHACADRAFT_194873 [Phanerochaete carnosa
HHB-10118-sp]
Length = 656
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 19/170 (11%)
Query: 268 YSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQ-MFDEKS-VFEQALELNKIADS 325
Y T ++K+ W+ L+ ++ + G + + ++ F+ M +E S V EQ L +
Sbjct: 85 YIMSTKTSKDAWDMLQAMF--KVSGPIAAVLIRWKLFRYMMEEGSNVEEQICTLRGYQEQ 142
Query: 326 IVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKAEEESRSHNKQE 385
+VA + + V+L+ LP SW F + + L L+ I AE+ R
Sbjct: 143 LVALDSAVSDKDFAFVLLTALPDSWDPF-VSALDTSDLEMNKLIGRILAEDNRRKARATT 201
Query: 386 EPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
E + F K + K V CYNC K+GH+A C
Sbjct: 202 ETTLFA--------------KKGKEMKKGKFRKGVTCYNCNKEGHLASEC 237
>gi|284434564|gb|ADB85309.1| putative germin-like protein subfamily [Phyllostachys edulis]
Length = 320
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 287 LDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKL 346
L + F T ++K +K+ +Q + +A S + M+ F V+VIL+KL
Sbjct: 60 LAKSFKTDVPTIQKLKAGLTPPKKAFLDQTVLKRPLAKSGPRSPML--RKFQVNVILAKL 117
Query: 347 PLSWKDFCIKLMRM-EYLTFTMLMDHIKAEEESRSHN---KQEEPSKFVELSPAVNFGP- 401
P SW+DF + E LT L I EE +R+ N K + + VE+ A FG
Sbjct: 118 PPSWRDFVTTRRHIKERLTLNELSAAINVEECARASNGTRKAQVQAHQVEVKSAGGFGKQ 177
Query: 402 RMREMSKKRRES---EMDSKTVVCYNC 425
+ + S+ + E + + +VC+ C
Sbjct: 178 KFKNQSQNKLEGKKMKNKKEKIVCFVC 204
>gi|147839269|emb|CAN74624.1| hypothetical protein VITISV_024822 [Vitis vinifera]
Length = 1250
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 106/276 (38%), Gaps = 47/276 (17%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +F+G ++ W QIE L K+ P++ P++ +KA E L+
Sbjct: 11 IEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPES-------MKAEEWALLDR 57
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ + LS + + K ++A +L + L +Y K +KK +M +
Sbjct: 58 QVLGVIRLT--LSRSVAHNVVKEKTTA-DLMKALSGMYEKPSANNKVHLMKKLFNLKMAE 114
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM-------- 360
SV + E N I + + + + + ++L+ LP SW + MRM
Sbjct: 115 NASVAQHLNEXNTITNQLSSVEIDFDDEIRALIVLASLPNSW-----EAMRMAVSNSTGK 169
Query: 361 EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES------- 413
E L + + D I AEE R + S A+N R R ++ +
Sbjct: 170 EKLKYNDIRDLILAEEIRRRDAGETSGS-----GSALNLETRGRGNNRNSNQGRSNSRNS 224
Query: 414 ------EMDSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C + + E
Sbjct: 225 NRNXSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|403406142|dbj|BAM42647.1| polyprotein [Arabidopsis thaliana]
gi|403406144|dbj|BAM42648.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 43.5 bits (101), Expect = 0.25, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVL--TDPCPIVTLCPQASSEEVT 236
T+ L + + + + NY +W++Q+ L ++A L + P P T+ ++ V
Sbjct: 13 TNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI----GTDAVP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + IL +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIE 303
R+Q+K++ +
Sbjct: 128 LRTQLKQWTK 137
>gi|4996367|dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 43.1 bits (100), Expect = 0.25, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVL--TDPCPIVTLCPQASSEEVT 236
T+ L + + + + NY +W++Q+ L ++A L + P P T+ ++ V
Sbjct: 13 TNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI----GTDAVP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + IL +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIE 303
R+Q+K++ +
Sbjct: 128 LRTQLKQWTK 137
>gi|404433800|dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 43.1 bits (100), Expect = 0.25, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVL--TDPCPIVTLCPQASSEEVT 236
T+ L + + + + NY +W++Q+ L ++A L + P P T+ ++ V
Sbjct: 13 TNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI----GTDAVP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + IL +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIE 303
R+Q+K++ +
Sbjct: 128 LRTQLKQWTK 137
>gi|403406148|dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 43.1 bits (100), Expect = 0.25, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVL--TDPCPIVTLCPQASSEEVT 236
T+ L + + + + NY +W++Q+ L ++A L + P P T+ ++ V
Sbjct: 13 TNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI----GTDAVP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + IL +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIE 303
R+Q+K++ +
Sbjct: 128 LRTQLKQWTK 137
>gi|403406140|dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 43.1 bits (100), Expect = 0.25, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVL--TDPCPIVTLCPQASSEEVT 236
T+ L + + + + NY +W++Q+ L ++A L + P P T+ ++ V
Sbjct: 13 TNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI----GTDAVP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + IL +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIE 303
R+Q+K++ +
Sbjct: 128 LRTQLKQWTK 137
>gi|404433802|dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 43.1 bits (100), Expect = 0.26, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVL--TDPCPIVTLCPQASSEEVT 236
T+ L + + + + NY +W++Q+ L ++A L + P P T+ ++ V
Sbjct: 13 TNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI----GTDAVP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + IL +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIE 303
R+Q+K++ +
Sbjct: 128 LRTQLKQWTK 137
>gi|403406146|dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 43.1 bits (100), Expect = 0.26, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVL--TDPCPIVTLCPQASSEEVT 236
T+ L + + + + NY +W++Q+ L ++A L + P P T+ ++ V
Sbjct: 13 TNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI----GTDAVP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + IL +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIE 303
R+Q+K++ +
Sbjct: 128 LRTQLKQWTK 137
>gi|38345425|emb|CAD41546.2| OSJNBb0091E11.16 [Oryza sativa Japonica Group]
Length = 839
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 41/211 (19%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQ 315
L L+D++ Y S K++W+ L+ + + G + Y+ Q +D K +
Sbjct: 35 FLGVLADNIVDVY-MHMPSGKDMWDALEAKFRVSDAGNEL-----YVMEQFYDYKMMLAN 88
Query: 316 ALELN--KIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTMLMDHI 372
LE N ++ D V G I++KLP SW DF L + + + L+ +
Sbjct: 89 ELENNNCELPDKFVVGG-----------IIAKLPPSWSDFATSLKHKRQEFSVIDLIGSL 137
Query: 373 KAEEESRSHNKQEEPSKFVELSPAVNF----GPRM-REMSKKRRESEMDSKTVV------ 421
EE++R+ +E K +E + N P + K+ +S++ K
Sbjct: 138 GVEEKARA---KENRGKNIEGGSSANLVQKKNPHASHNNNNKKVKSDVKPKATTNFKKKG 194
Query: 422 -------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K H AK+C +++ + N
Sbjct: 195 KGKAKGDCFVCGKPRHWAKNCPDRKDKKSAN 225
>gi|404433796|dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 43.1 bits (100), Expect = 0.26, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVL--TDPCPIVTLCPQASSEEVT 236
T+ L + + + + NY +W++Q+ L ++A L + P P T+ ++ V
Sbjct: 13 TNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI----GTDAVP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + IL +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIE 303
R+Q+K++ +
Sbjct: 128 LRTQLKQWTK 137
>gi|404433790|dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 43.1 bits (100), Expect = 0.26, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVL--TDPCPIVTLCPQASSEEVT 236
T+ L + + + + NY +W++Q+ L ++A L + P P T+ ++ V
Sbjct: 13 TNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI----GTDAVP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + IL +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIE 303
R+Q+K++ +
Sbjct: 128 LRTQLKQWTK 137
>gi|77555220|gb|ABA98016.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1014
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 107/270 (39%), Gaps = 28/270 (10%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPI--VTLCPQASSEEVTRVKAA---- 241
++ G NY W ++++L +V +VLT PCP+ V L + + K+
Sbjct: 26 DIPTLQGDNYAEWKRKLDLAFIMGEVDWVLTTPCPVEPVELIKGENESDADWQKSQRDNA 85
Query: 242 ---------ERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG 292
++KW N C + N + + + + E E +K +
Sbjct: 86 PLVMSYDIEQKKWSLANKKCLAVVKNTIEPTILGSIPE-CDAVSEYLERIKSQFTGFS-K 143
Query: 293 TKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKD 352
T +Q+ K + + + V + L ++ +A + + I ++F V ++++ LP + +
Sbjct: 144 TYATQLIKQLVTERYHGGGVRDHILRMSNMASKLKPMDLGITDDFLVHLVMASLPKQFDN 203
Query: 353 FCIKL-MRMEYLTFTMLMDHIKAEEE------SRSHNKQEEPSKFVELSPAVNFGPRMRE 405
F I + +E F L+ + EEE S N ++ K SP
Sbjct: 204 FIINYNISLEKWNFEKLIANYVQEEERIKESNGGSINYVKDNKKKNHKSPTSKAKQSQHL 263
Query: 406 MSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
+++ E D C +C+K GH K C
Sbjct: 264 PQQQQFAVEKDQ----CLHCKKIGHYKKDC 289
>gi|147788024|emb|CAN69340.1| hypothetical protein VITISV_032634 [Vitis vinifera]
Length = 1298
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 105/276 (38%), Gaps = 47/276 (17%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +F+G ++ W QIE L K+ P++ P++ +KA E L+
Sbjct: 11 IEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPES-------MKAEEWALLDR 57
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ + LS + + K ++A +L + L +Y K +KK +M +
Sbjct: 58 QVLGVIRLT--LSRSVAHNVVKEKTTA-DLMKALSGMYEKXSANNKVHLMKKLFNLKMAE 114
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM-------- 360
SV + E N I + + + + + ++L+ LP SW + MRM
Sbjct: 115 NASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSW-----EAMRMAVSNSTGK 169
Query: 361 EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES------- 413
E L + + D I AEE R + S A+N R R ++
Sbjct: 170 EKLKYNDIRDLILAEEIRRRDAGETSGS-----GSALNLETRGRGNNRNSNHGRSNSRNS 224
Query: 414 ------EMDSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C + + E
Sbjct: 225 NRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|4996369|dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 43.1 bits (100), Expect = 0.26, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVL--TDPCPIVTLCPQASSEEVT 236
T+ L + + + + NY +W++Q+ L ++A L + P P T+ ++ V
Sbjct: 13 TNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI----GTDAVP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + IL +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIE 303
R+Q+K++ +
Sbjct: 128 LRTQLKQWTK 137
>gi|404433794|dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 43.1 bits (100), Expect = 0.26, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVL--TDPCPIVTLCPQASSEEVT 236
T+ L + + + + NY +W++Q+ L ++A L + P P T+ ++ V
Sbjct: 13 TNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI----GTDAVP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + IL +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIE 303
R+Q+K++ +
Sbjct: 128 LRTQLKQWTK 137
>gi|404433792|dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 43.1 bits (100), Expect = 0.26, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVL--TDPCPIVTLCPQASSEEVT 236
T+ L + + + + NY +W++Q+ L ++A L + P P T+ ++ V
Sbjct: 13 TNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI----GTDAVP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + IL +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIE 303
R+Q+K++ +
Sbjct: 128 LRTQLKQWTK 137
>gi|147794139|emb|CAN60106.1| hypothetical protein VITISV_028182 [Vitis vinifera]
Length = 815
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 104/276 (37%), Gaps = 47/276 (17%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +F+G ++ W QIE L K+ P++ P++ +KA E W
Sbjct: 11 IEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPES-------MKAEE--WALL 55
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ I LS + + K ++ +L + L +Y K +KK +M +
Sbjct: 56 DRQVLGVIRLTLSRSVAHNVVKEKTTT-DLMKALSGMYEKPSANNKVHLMKKLFNLKMAE 114
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM-------- 360
SV + E N I + + + + + ++L+ LP SW + MRM
Sbjct: 115 NASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSW-----EAMRMAVSNSTGK 169
Query: 361 EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES------- 413
E L + + D I AEE R + S A+N R R ++ +
Sbjct: 170 EKLKYNDIRDLILAEEIRRRDAGETSGS-----GSALNLETRGRGNNRNSNQGRSNSRNS 224
Query: 414 ------EMDSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C + + E
Sbjct: 225 NRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|108862423|gb|ABA96959.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 920
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 22/158 (13%)
Query: 306 MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYL 363
M D++SV EQA E+ +A + + + F I++KLP SW DF L R E+
Sbjct: 1 MVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWLDFATSLKHKRQEF- 59
Query: 364 TFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVV-- 421
+ + L+ + EE++R+ + + K VE + N + + +
Sbjct: 60 SVSDLIGSLGVEEKARAKDVR---GKRVEGGSSANMVQKKNPHASHNNKKVKPDVKPKAA 116
Query: 422 --------------CYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C K GH AK C ++ + N
Sbjct: 117 TNFKKKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 154
>gi|225711344|gb|ACO11518.1| Activated RNA polymerase II transcriptional coactivator p15
[Caligus rogercresseyi]
Length = 112
Score = 43.1 bits (100), Expect = 0.27, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 90 DGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKL--VPTAKGIALTSEQWRAFSKS 147
DG+ L N + V ++EFKG+ ++ IREY+ + P KGI+L ++Q++ +
Sbjct: 44 DGEEPSWHLGNNKHVKVREFKGKTYIDIREYYVDKSTMDTKPGKKGISLNTQQYQELKQI 103
Query: 148 LPAIDEAV 155
+ ID ++
Sbjct: 104 IADIDASL 111
>gi|403158005|ref|XP_003307360.2| hypothetical protein PGTG_00310 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375163641|gb|EFP74354.2| hypothetical protein PGTG_00310 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 337
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 95/250 (38%), Gaps = 39/250 (15%)
Query: 196 NYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN-IC-- 252
NY W+ +E+ V YV+T+ L P W DN +C
Sbjct: 86 NYLDWSWILEIHFMATDVDYVITEDPAKAKLKPN---------------WERDNKAVCGV 130
Query: 253 ---RHHILNFLS-DHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
H +N + HL + + LW+ LK + D G ++K +M
Sbjct: 131 ISRTIHPINIRNVRHL-------KTDTRGLWDALKRAHQDSSAGGVMYWLRKLTMSRMAT 183
Query: 309 E---KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTF 365
E + E A ++ + + E+ + + IL+ LP W +M ++
Sbjct: 184 EDLSSHLDEMAKTYERLNALVTTESPLTPEDIYSASILTSLPQDWLSCVSSMMNEPRVSP 243
Query: 366 TMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNC 425
L+D +KAEE R + ++PS +E + A P + KR+ + +K C C
Sbjct: 244 IKLIDALKAEELRRK-TRSDDPS-LLESASATKANP-----NSKRKGNSAGNKPRHCTFC 296
Query: 426 RKKGHVAKHC 435
GH +C
Sbjct: 297 DMDGHDLNNC 306
>gi|147800264|emb|CAN70932.1| hypothetical protein VITISV_040966 [Vitis vinifera]
Length = 1212
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 106/278 (38%), Gaps = 47/278 (16%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+ + +F+G ++ W QIE L K+ P++ P+ +KA E L
Sbjct: 9 SGIEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPEX-------MKAEEWALL 55
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+ + + LS + + K ++A +L + L +Y K +KK +M
Sbjct: 56 DRQVLGVIRLT--LSRSVAHNVVKEKTTA-DLMKALSGMYEKPSANNKVHLMKKLFNLKM 112
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM------ 360
+ SV + E N I + + + + + ++L+ LP SW + MRM
Sbjct: 113 AENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSW-----EAMRMAVSNST 167
Query: 361 --EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES----- 413
E L + + D I AEE R + S A+N R R ++ +
Sbjct: 168 GKEKLKYNDIRDLILAEEIRRRDAGETSGS-----GSALNLETRGRGNNRNSNQGRSNSR 222
Query: 414 --------EMDSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C + + E
Sbjct: 223 NSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|307191321|gb|EFN74944.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Camponotus floridanus]
Length = 305
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 101/257 (39%), Gaps = 23/257 (8%)
Query: 196 NYRVWAQQIE-LLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKW-LNDNNICR 253
NY WA Q+E +L K YV + + A S E A R W + D
Sbjct: 14 NYDTWAIQMEAILTKNDAWGYVCGNKVKPEVIEGDAVSAE------AARTWDIQDKKAKA 67
Query: 254 HHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVF 313
IL+ S L + K +++E+W +LK +Y K + +K+ +M D V
Sbjct: 68 DIILSIKSSEL--KQIKGCCTSREVWLKLKSIYQSSGPARKATLLKQLTLHKMNDGGDVR 125
Query: 314 EQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF-CIKLMRMEYLTFTMLMDHI 372
+ D + + I + ++L LPL++ +F C R E + L I
Sbjct: 126 DHLRRFFDTIDKLSEMDVDINADLLTIMLLYSLPLTFDNFRCAIESRDELPSPETLRIKI 185
Query: 373 KAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSK-----TVV-----C 422
E ++R ++ +E + + FG R K E + SK T V C
Sbjct: 186 IEEYDARKNDTREHVPNAMLVKK--QFGKRYNANKKSGNELKGTSKGGNAPTKVPFKYKC 243
Query: 423 YNCRKKGHVAKHCHNKR 439
+ C K GH A C+ R
Sbjct: 244 HRCGKVGHKAAECNAPR 260
>gi|156836832|ref|XP_001642458.1| hypothetical protein Kpol_262p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156112989|gb|EDO14600.1| hypothetical protein Kpol_262p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 293
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSLP 149
D+I NKR V +++F+ + IREY+ G++ P KGI+LT + + F K
Sbjct: 43 DAIFDIGKNKR-VTVRQFRNVNLIDIREYYLDNSTGEMRPGKKGISLTEDLYDEFLKHRL 101
Query: 150 AIDEAVVKMQSK 161
IDEA+ ++ SK
Sbjct: 102 NIDEALRRLGSK 113
>gi|218184639|gb|EEC67066.1| hypothetical protein OsI_33824 [Oryza sativa Indica Group]
Length = 516
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 111/255 (43%), Gaps = 35/255 (13%)
Query: 196 NYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAE-RKWLNDNNICRH 254
N++ W + + ++L + + VL PI+ ++ T+ + E +W N++
Sbjct: 148 NFKEWKENVLIVLGVMDLDLVLRKEQPILL-------DKSTKYENMEYERWDRSNHMSLM 200
Query: 255 HILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFE 314
+ + + S+ ++AK E L+ + E + + K I + + ++ E
Sbjct: 201 IMKRSIPEAFRDSASEEVTTAKVFLETLQKRFARNEKAETSTLLAKLISMRYKGKGNMRE 260
Query: 315 QALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTMLMDHIK 373
+E++ +A + A + + E+ + +IL LP + F + + + T L+ H
Sbjct: 261 YIMEMSHLASKLKALKLDLSEDLLMHLILISLPTQFNQFKVSYNCQKDKWTVNKLITHCV 320
Query: 374 AEEES-------------RSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV 420
EEE S+NK+ + + V++ P + K+RE+ +
Sbjct: 321 QEEERLKQDRIESAHLSLTSNNKKRKSKEAVDVQPPL-----------KKRENNCGEE-- 367
Query: 421 VCYNCRKKGHVAKHC 435
+CY C+K+GH+ K+C
Sbjct: 368 LCYFCKKEGHMKKNC 382
>gi|147832799|emb|CAN65898.1| hypothetical protein VITISV_009328 [Vitis vinifera]
Length = 288
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 106/273 (38%), Gaps = 48/273 (17%)
Query: 180 SPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVK 239
SPL L + + NGKNY+ W Q I+L++ +LT + T V
Sbjct: 10 SPLHL---TIEKLNGKNYKEWVQAIKLVIDGKGKLGLLTG---------ETRRPPPTDV- 56
Query: 240 AAERKWLNDNNICRHHILNFLSDHL--YYQYSKRTSSAKE--------------LWEELK 283
AA +KW ++N+ +++N + + Y + T K+ LW++L
Sbjct: 57 AASQKWRSENSFITSYLINSMKPAIGKTYMFLPTTKDMKQGDWEVTEYYTEMLGLWQDLD 116
Query: 284 LVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVIL 343
L +EE+ V+ + +M +E+ VFE LN+ D I S +L
Sbjct: 117 L-NCEEEWECTGDSVR--FKKKMENER-VFEFLTGLNRELDDI------------RSRVL 160
Query: 344 SKLPL-SWKDFCIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPR 402
++ PL S ++ ++ R E ML E S P P GP
Sbjct: 161 NRRPLPSIREVFSEVRREENRRKVMLDLSFGPEASSLLTRGPHGPHAATGRGPYA--GPS 218
Query: 403 MREMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
++ + SK C +C+K GH C
Sbjct: 219 GPHVAGSSGPNPRQSKRTYCEHCKKLGHTKDTC 251
>gi|403353035|gb|EJY76050.1| Putative RNA polymerase II transcriptional coactivator [Oxytricha
trifallax]
Length = 220
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSL 148
D S I +L+NK+ V ++++KG V IRE + ++G+ + T KG++LT E + L
Sbjct: 150 DKEGSAIFELNNKKKVVVKKYKGMTLVDIRETYEKNGETLFTQKGVSLTLEMFEKLKDML 209
Query: 149 PAIDEAVVK 157
P+ID+ + K
Sbjct: 210 PSIDQELKK 218
>gi|225719560|gb|ACO15626.1| Activated RNA polymerase II transcriptional coactivator p15
[Caligus clemensi]
Length = 113
Score = 43.1 bits (100), Expect = 0.32, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 90 DGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKL--VPTAKGIALTSEQWRAFSKS 147
DG L N + V ++EFKG+ ++ IREY+ + P KGI+L ++Q++ +
Sbjct: 45 DGQEPSWHLGNNKHVKVREFKGKTYIDIREYYVDKNTMDTKPGKKGISLNTQQYQELKQV 104
Query: 148 LPAIDEAV 155
+ ID ++
Sbjct: 105 IADIDASL 112
>gi|392401683|ref|YP_006438295.1| transcriptional coactivator p15 [Turneriella parva DSM 21527]
gi|390609637|gb|AFM10789.1| transcriptional coactivator p15 [Turneriella parva DSM 21527]
Length = 74
Score = 43.1 bits (100), Expect = 0.32, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 104 VAIQEFKGRAFVSIREYFRRD-GKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
V + EFKG+ + IR ++ + G+L PT KG+AL+ EQ++ F + A+D+
Sbjct: 19 VEVGEFKGKKLLHIRTWYTNEAGELAPTKKGVALSYEQFQKFKSIIGAVDD 69
>gi|4587604|gb|AAD25832.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 128
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 215 YVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSS 274
Y+ DP P V PQ ++ + W + C+ ILN L + Y+K SS
Sbjct: 36 YLTEDP-PTV---PQGTTN--VYAVGSMNTWAQGDYCCKGLILNRLVHDRFGLYNKSKSS 89
Query: 275 AKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFE 314
K LW L+ Y +E G +R K++ F+M D K + E
Sbjct: 90 -KTLWLALENKYKTDESGRQRFSTTKFLNFKMVDSKQIME 128
>gi|147811713|emb|CAN65966.1| hypothetical protein VITISV_005935 [Vitis vinifera]
Length = 1154
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 19/110 (17%)
Query: 191 RFNGKNYRVWAQQIELLLK-QLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +G NY +W+Q +E+ + + K+ Y+ D P P+ T A +KW +
Sbjct: 50 KLDGTNYALWSQIVEMYISGKDKLGYINGDLPQPLQT-------------DPAFKKWRTE 96
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
N + + ++N + L + R S AK +W+ + + Y D GT SQV
Sbjct: 97 NAMVKGWLINSMDPKLVSNFI-RFSMAKAVWDNIVITYFD---GTDTSQV 142
>gi|113205334|gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
Length = 1355
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 308 DEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTF 365
D K+V Q EL I ++A M++ E F V+ ++ KLP SW DF +K R E +
Sbjct: 229 DSKTVGSQVQELQLIFHDLIAEDMVVNEAFQVAAMIEKLPPSWNDFKNYLKHKRKE-MKL 287
Query: 366 TMLMDHIKAEEESRSHNKQEEPSKFV 391
L+ +K EE++++ K+ S +
Sbjct: 288 EDLVIRLKIEEDNKTAEKKSRKSSTI 313
>gi|242011317|ref|XP_002426399.1| 46 kDa FK506-binding nuclear protein, putative [Pediculus humanus
corporis]
gi|212510498|gb|EEB13661.1| 46 kDa FK506-binding nuclear protein, putative [Pediculus humanus
corporis]
Length = 258
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 1 METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60
M V + ++R+ + +LKN+D+ +M+ KVR + E+L +DL+D K+ + +V FL
Sbjct: 1 MADVPKDKLRKEITAILKNADLTKMSAKKVRQQLEEKLEVDLTD--QKKVVDDLVMEFLK 58
Query: 61 STT 63
TT
Sbjct: 59 ETT 61
>gi|71065686|ref|YP_264413.1| exoribodeoxynuclease V, gamma subunit [Psychrobacter arcticus 273-4]
gi|71038671|gb|AAZ18979.1| possible exoribodeoxynuclease V, gamma subunit [Psychrobacter
arcticus 273-4]
Length = 1512
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 31/182 (17%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE-----VTRVKAA 241
TE+H++ KN + LLK L A + PI +S V+ + +
Sbjct: 1272 TEIHKYPLKNN-------DSLLKLLPKAIKIKGSVPISVPVDAHNSRSHLQAGVSYAEQS 1324
Query: 242 ERKWLN--DNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVK 299
++WLN N+ H+L F HLY+Q ++RT++ + + ++ F SQ+K
Sbjct: 1325 PKQWLNILPNSASPRHLLKFWLSHLYWQVARRTTAEQAASNDGVSIW---RFNKPSSQIK 1381
Query: 300 KYIEFQMFD-EKSVFEQA-LELNKIADSIVAAGMMIYENFHVSVILSKLP---LSWKDFC 354
KY + F V+E A +EL K A ++ V ++ LP LS+ D C
Sbjct: 1382 KYEKVTAFKLSPIVYEDAVVELIKWA---------VFAKLSGQVPITLLPEYALSYLDKC 1432
Query: 355 IK 356
++
Sbjct: 1433 LQ 1434
>gi|110288918|gb|ABG66024.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 846
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 53/201 (26%)
Query: 190 HRFNGKNYRVWAQQIELLLKQLKVAYVL----TDPCPIVTLCPQASSEEVTRVKAAERKW 245
H F+G NY+ W L L ++ YV ++P P + EEV K+
Sbjct: 28 HAFDGSNYKRWKACALLWLTAMQCFYVSRGKRSEP-------PLSPEEEV--------KF 72
Query: 246 LNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQ 305
+ + R +++ L+D++ Y S K++W+ L + +FG + + Y+ Q
Sbjct: 73 EASDCLFRGALISVLADNIVDVY-MHMPSGKDMWDAL-----EAKFGVSDAGSELYVMEQ 126
Query: 306 MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL--MRMEYL 363
+D K V + I++KLP SW F I L R E+
Sbjct: 127 FYDYKMVDDCG-------------------------IIAKLPPSWSGFAISLKHKRQEF- 160
Query: 364 TFTMLMDHIKAEEESRSHNKQ 384
+ + L+ + EE++R+ + +
Sbjct: 161 SVSDLIGSLGVEEKARAKDNR 181
>gi|270008864|gb|EFA05312.1| hypothetical protein TcasGA2_TC015470 [Tribolium castaneum]
Length = 2375
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 35/254 (13%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +FNGK+Y W ++E++L V + + E T A +L
Sbjct: 11 ITQFNGKDYDHWKFRMEIILDHHDVKRCIEE-------------ENATPDDA----FLKM 53
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ C+ I+ +++ + QY K ++A ++W L+ + + ++ KK + ++
Sbjct: 54 DKKCKSLIIQCIANS-HLQYVKDKTTAYQMWISLEAGFQRKGITSQLFLRKKLLTMKLSS 112
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTML 368
++ + L+ + + + G + E V +L LP S+ L ME T+
Sbjct: 113 NDTMEKHFLKFEETIRELKSVGAKLEEMDVVCHLLLTLPKSFDPLVTALETMEPSKLTL- 171
Query: 369 MDHIKA---EEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV---VC 422
D +K + E + N+ E +E+ + F R K ++ + +K V C
Sbjct: 172 -DFVKGKLLDCELKRKNQCSE----IEVPSSSAFNSR-----KFNKQQSVWNKKVFPFTC 221
Query: 423 YNCRKKGHVAKHCH 436
+NC KKGH CH
Sbjct: 222 HNCGKKGHKRADCH 235
>gi|405961838|gb|EKC27582.1| Tripartite motif-containing protein 2 [Crassostrea gigas]
Length = 800
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 94 IICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
I+ LS KR V++ + + FV IREY D + KG+ALT QW + +P I+
Sbjct: 735 ILFSLSWKRRVSVYQHQEEVFVDIREY-SEDRTFQRSTKGVALTKPQWTKLREEMPNIEA 793
Query: 154 AVVKMQ 159
V M+
Sbjct: 794 LVQHME 799
>gi|115480545|ref|NP_001063866.1| Os09g0551200 [Oryza sativa Japonica Group]
gi|113632099|dbj|BAF25780.1| Os09g0551200 [Oryza sativa Japonica Group]
Length = 280
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLD-EEFGTKRSQVKKYIEFQ---MFDEKS 311
+ + D + Q + + +AKE WE LK +L + R Q K EF+ M ++
Sbjct: 78 LFGAVPDEVLQQIANK-KTAKEAWESLKTRFLGVDRVKKARVQTLKS-EFKALCMKKTET 135
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP-------LSWKDFCIKLMRMEYLT 364
+ E A +++ +A+++ G + ++ V +L +P + + FC ++ +
Sbjct: 136 IDEFAGKISGLANAMSGLGATMTDDELVKKLLDSVPEKFLHIIAAIEQFC----DLDTMP 191
Query: 365 FTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYN 424
F + +KA EE + + + + + + G + + R D V+CY+
Sbjct: 192 FEEAIGRLKAFEERIRKHSDNDGEQLLLTTRNTDDG------AGRARGKRFDKSKVMCYH 245
Query: 425 CRKKGHVAKHCHNKRLHQEI 444
C++ GH A C K+ ++EI
Sbjct: 246 CQELGHFAFECPAKKKNKEI 265
>gi|270009808|gb|EFA06256.1| hypothetical protein TcasGA2_TC009115 [Tribolium castaneum]
Length = 1267
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 104/255 (40%), Gaps = 25/255 (9%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+ +++F+G NY+ W Q++ LK V + E+ + + E
Sbjct: 8 SAINKFDGNNYKQWRFQLKCALKAKGVYSIAI-----------GEIEKPSANRVEELNTW 56
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
N + ++ + + +AKE+ ++L +Y + K +++ +++M
Sbjct: 57 NKKDAIAMCVITSTMELSQITMIESCDTAKEILDKLDAIYDIKTETNKMLIHEEFHQYKM 116
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM--EYLT 364
S+ + ++ +A I +G I E ++ IL LP +++F + + + T
Sbjct: 117 CLNDSIAQHISKVENLARRIRESGDNISEVAIITKILGTLPAKYRNFRQAWLSLAEDKQT 176
Query: 365 FTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYN 424
+ L + EE + + + E + L P + + K R + CYN
Sbjct: 177 LSNLTSRLIDEERNLTTVETTENA----LVTTTRVVPNKKTIRGKPR--------ITCYN 224
Query: 425 CRKKGHVAKHCHNKR 439
C KKGH+++ C R
Sbjct: 225 CNKKGHISRECRAPR 239
>gi|189239114|ref|XP_001813413.1| PREDICTED: similar to copia-type polyprotein, putative [Tribolium
castaneum]
Length = 1269
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 104/255 (40%), Gaps = 25/255 (9%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+ +++F+G NY+ W Q++ LK V + E+ + + E
Sbjct: 8 SAINKFDGNNYKQWRFQLKCALKAKGVYSIAI-----------GEIEKPSANRVEELNTW 56
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
N + ++ + + +AKE+ ++L +Y + K +++ +++M
Sbjct: 57 NKKDAIAMCVITSTMELSQITMIESCDTAKEILDKLDAIYDIKTETNKMLIHEEFHQYKM 116
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM--EYLT 364
S+ + ++ +A I +G I E ++ IL LP +++F + + + T
Sbjct: 117 CLNDSIAQHISKVENLARRIRESGDNISEVAIITKILGTLPAKYRNFRQAWLSLAEDKQT 176
Query: 365 FTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYN 424
+ L + EE + + + E + L P + + K R + CYN
Sbjct: 177 LSNLTSRLIDEERNLTTVETTENA----LVTTTRVVPNKKTIRGKPR--------ITCYN 224
Query: 425 CRKKGHVAKHCHNKR 439
C KKGH+++ C R
Sbjct: 225 CNKKGHISRECRAPR 239
>gi|147805017|emb|CAN60373.1| hypothetical protein VITISV_034932 [Vitis vinifera]
Length = 1264
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 70/151 (46%), Gaps = 21/151 (13%)
Query: 185 FPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERK 244
P H+ NG+NY W+Q I + ++ + +T + P+ ++ + +K
Sbjct: 28 LPITAHKLNGQNYLQWSQSILMFIRGKEKDDYITG----ASAAPETTA-------STYKK 76
Query: 245 WLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIE- 303
W+ +NN+ ++N ++ + + +AKE+W+ K + D+E ++ Q++ +
Sbjct: 77 WIAENNMVMSWLVNSMTTDIGENFLS-FDTAKEIWDIAKETFSDKENTSEIIQIEGILHD 135
Query: 304 --------FQMFDEKSVFEQALELNKIADSI 326
++ + K VF+ L LNK D I
Sbjct: 136 LRQDGLLYKKIVEGKRVFKFLLGLNKNLDEI 166
>gi|145342093|ref|XP_001416129.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576353|gb|ABO94421.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 149
Score = 42.4 bits (98), Expect = 0.53, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 88 NDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRR--DGKLVPTAKGIALTSEQWRAFS 145
+D ++ + LS + V ++++K V IREY++ +G P KGI+L+S QWR
Sbjct: 58 DDAVENEVVALSKTKRVTVRKWKETTLVDIREYYQAGGEGPYKPGKKGISLSSAQWRVLD 117
Query: 146 KSLPAIDEAV 155
++ + A+
Sbjct: 118 ANIDKVASAI 127
>gi|353245656|emb|CCA76548.1| hypothetical protein PIIN_10541 [Piriformospora indica DSM 11827]
Length = 212
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 68/169 (40%), Gaps = 22/169 (13%)
Query: 277 ELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIY-- 334
E+W++L ++ ++ GT+ + + D + + E +N + + M Y
Sbjct: 52 EMWKKLASIHNNKSAGTRFNAMDSLFGVTKEDSEDLAELMTRINGLLQRVKQLWPMGYTI 111
Query: 335 ----ENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEE---- 386
E + IL LP ++ C L+ T ++ + +AE+ R H +Q +
Sbjct: 112 TDLDEELAIMAILRALPDDYRHLCSSLLCQTNTTCEVIEEVFRAEDNHRRHEQQSQATAL 171
Query: 387 ----PSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHV 431
P+++ SP+ +F P+ + + +C C KK H
Sbjct: 172 RVTTPNQYQTNSPSHHFRPKPSATGR--------TPGALCTFCGKKNHT 212
>gi|15238271|ref|NP_199021.1| DEK, chromatin associated protein [Arabidopsis thaliana]
gi|75170708|sp|Q9FHX8.1|MDA3_ARATH RecName: Full=Mediator-associated protein 3; AltName:
Full=DEK-domain containing protein At5g42060; AltName:
Full=KELP-like protein
gi|9757951|dbj|BAB08439.1| unnamed protein product [Arabidopsis thaliana]
gi|18252171|gb|AAL61918.1| unknown protein [Arabidopsis thaliana]
gi|21386925|gb|AAM47866.1| unknown protein [Arabidopsis thaliana]
gi|332007378|gb|AED94761.1| DEK, chromatin associated protein [Arabidopsis thaliana]
Length = 92
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 42/63 (66%)
Query: 8 RIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLSTTESTD 67
+I++TV ++L++S++ ++TE K R EAS +L +DLS +K ++ VE+FL +
Sbjct: 18 KIKKTVKKILESSNLYKITEIKAREEASLKLDLDLSQDPYKVIVKEEVENFLEEAVKLIG 77
Query: 68 NRI 70
N++
Sbjct: 78 NKL 80
>gi|77553519|gb|ABA96315.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 271
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 39/208 (18%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLD-EEFGTKRSQVKKYIEFQ---MFDEKS 311
+ + D + Q + + +AKE WE LK +L + R Q K EF+ M ++
Sbjct: 69 LFGAVPDEVLQQIANK-KTAKEAWESLKTRFLGVDRVKKARVQTLKS-EFKALCMKKTET 126
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP-------LSWKDFCIKLMRMEYLT 364
+ E A +++ +A+++ G + ++ V +L +P + + FC ++ +
Sbjct: 127 IDEFAGKISGLANAMSGLGATMTDDELVKKLLDSVPEKFLHIIAAIEQFC----DLDTMP 182
Query: 365 FTMLMDHIKA-EEESRSHNKQEEPSKFVELSPAVNFGPRM-------REMSKKRRESEMD 416
F + +KA EE R H+ N+G ++ + + + R D
Sbjct: 183 FEEAIGRLKAFEERIRKHSD--------------NYGEQLLLTTRNTDDGAGRARSKRFD 228
Query: 417 SKTVVCYNCRKKGHVAKHCHNKRLHQEI 444
V+CY+C++ GH A C K+ ++EI
Sbjct: 229 KSKVMCYHCQELGHFAFECPAKKKNKEI 256
>gi|170092293|ref|XP_001877368.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647227|gb|EDR11471.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 159
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQ 140
+DGD I L K+ ++ FKG + IRE++ G+ P KGI+LT EQ
Sbjct: 81 NDGDKYI-DLGKKKRATVRAFKGTVLLDIREFYEAGGEEKPGKKGISLTIEQ 131
>gi|331227245|ref|XP_003326291.1| hypothetical protein PGTG_08121 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309305281|gb|EFP81872.1| hypothetical protein PGTG_08121 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 291
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 102/246 (41%), Gaps = 34/246 (13%)
Query: 196 NYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHH 255
NY +W +E+ L +L + V+ D VT+ + + W NN
Sbjct: 17 NYALWFLPMEVRLFKLNLLDVVEDNI-------------VTKTEYDKAAWNKLNNTAYSE 63
Query: 256 ILNFLSDHLYYQYSKRTSS-----AKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
I+ ++ + S S + LW+ LK Y ++ + + + +++ F
Sbjct: 64 IIGYIGQEVLGFVSSALPSTPRFNGQGLWKLLKAQYAGDDLTLQTTALDQFLHLD-FSSI 122
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF-CIKLMRMEYLTFTMLM 369
S+F A++ I +G+++ + ++L KLPL ++ F I LM + +F +
Sbjct: 123 SLFIPAVQ--SANQKITMSGLVLDDRVQTILMLKKLPLDYRSFRDIVLMNYDSESFESV- 179
Query: 370 DHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKG 429
IK E + N ++ P + P ++ R ++ S + +C +C+K G
Sbjct: 180 --IKKLESYVAQNNLDK-------KPVASTTPLQSLLT--RSSNQSSSNSPLCDHCKKPG 228
Query: 430 HVAKHC 435
H +C
Sbjct: 229 HRINNC 234
>gi|147772735|emb|CAN60627.1| hypothetical protein VITISV_018874 [Vitis vinifera]
Length = 416
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 17/136 (12%)
Query: 169 EQNKDVANSMTSPLELFPTELH----RFNGKNYRVWAQQIELLL-KQLKVAYVLTDPCPI 223
E+ ++ +SM S + LH + NGKNY+ WAQ I+L++ + K+ +++ +
Sbjct: 18 ERESEINSSMGSAGAFDNSPLHLTVEKLNGKNYKEWAQAIKLIIDGKGKLGFLIGE---- 73
Query: 224 VTLCPQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELK 283
T P ++ AA +KW ++N+ ++N + + Y AK++W+ ++
Sbjct: 74 -TWRPPLTN------AAASQKWRSENSFITSCLINSMKPAIGKTY-MFLPKAKDVWDGIR 125
Query: 284 LVYLDEEFGTKRSQVK 299
Y D E ++ ++K
Sbjct: 126 ETYSDAENASQIFELK 141
>gi|331230084|ref|XP_003327707.1| hypothetical protein PGTG_09241 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 560
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQ 315
+L F+S L S + + LW+ LK Y ++ ++ + + +++ S
Sbjct: 72 VLGFVSSALP---STPRFNGQGLWKLLKAQYAGDDLTSQTTALDQFLHLDFSSITSFIPS 128
Query: 316 ALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKAE 375
N+ I +G+++ + ++L KLP ++ F ++ M Y T + K E
Sbjct: 129 VRSANQ---KITMSGLILDDRVRTILMLKKLPSDYRSFR-DIVSMNYGTESFESVIKKLE 184
Query: 376 EESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
++ ++P P+ + P +++ ++ +S + VC +C+K GH +C
Sbjct: 185 SYVAQNDLDKKP-------PSTSSIPIQSLLTRPNDQASSNSNSAVCSHCKKPGHRPHNC 237
>gi|189238218|ref|XP_970252.2| PREDICTED: similar to formin 3 CG33556-PB [Tribolium castaneum]
Length = 2139
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 35/254 (13%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +FNGK+Y W ++E++L V + + E T A +L
Sbjct: 128 ITQFNGKDYDHWKFRMEIILDHHDVKRCIEE-------------ENATPDDA----FLKM 170
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ C+ I+ +++ + QY K ++A ++W L+ + + ++ KK + ++
Sbjct: 171 DKKCKSLIIQCIANS-HLQYVKDKTTAYQMWISLEAGFQRKGITSQLFLRKKLLTMKLSS 229
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTML 368
++ + L+ + + + G + E V +L LP S+ L ME T+
Sbjct: 230 NDTMEKHFLKFEETIRELKSVGAKLEEMDVVCHLLLTLPKSFDPLVTALETMEPSKLTL- 288
Query: 369 MDHIKA---EEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV---VC 422
D +K + E + N+ E +E+ + F R K ++ + +K V C
Sbjct: 289 -DFVKGKLLDCELKRKNQCSE----IEVPSSSAFNSR-----KFNKQQSVWNKKVFPFTC 338
Query: 423 YNCRKKGHVAKHCH 436
+NC KKGH CH
Sbjct: 339 HNCGKKGHKRADCH 352
>gi|409039643|gb|EKM49173.1| hypothetical protein PHACADRAFT_67635, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 498
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 51/272 (18%), Positives = 95/272 (34%), Gaps = 44/272 (16%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
+ +G NYR W Q+I +LT T P EE + AA
Sbjct: 122 KADGTNYRTWVQRINFAALGCACKALLT-----ATPIPSDKEEEANALLAA--------- 167
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
I L D ++ S ++ +K + ++ S K+ +EK
Sbjct: 168 -----IAGKLPDSIFMNISGTAKVPNDIINAMKTRFGQTTAVSEASAQKRLFSLHCDNEK 222
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF------------CIKLM 358
+ E L + + I AG+ I + +++ +P S+
Sbjct: 223 KMQEHLDCLLALKEEITEAGITIEDKTFTDAVIASVPASYMSIVQAYESSIHVYNATNPA 282
Query: 359 RMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVN-----------FGPRMREMS 407
+ T L+ ++AE +SR + +P + E++ A++ G + +
Sbjct: 283 TKRVVKSTELLPLLRAEAQSRMSIARSKPKE--EVAAAIDSCGRRGKGRGRGGAKTGSGA 340
Query: 408 KKRRESEMDSKTVVCYNCRKKGHVAKHCHNKR 439
R+ + C+ C KGH A C +K+
Sbjct: 341 GSRQGQATTDANITCFKCLGKGHRANVCPSKQ 372
>gi|147778480|emb|CAN69431.1| hypothetical protein VITISV_024659 [Vitis vinifera]
Length = 1287
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 106/278 (38%), Gaps = 47/278 (16%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+ + +F+G ++ W QIE L K+ P++ P++ +KA E L
Sbjct: 9 SGIEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPES-------MKAEEWALL 55
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+ + + LS + + K ++ +L + L +Y K +KK +M
Sbjct: 56 DRQVLGVIRLT--LSRSVAHNVVKEKTTX-DLMKALSGMYEKPSANNKVHLMKKLFNLKM 112
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM------ 360
+ SV + E N I + + + + + ++L+ LP SW + MRM
Sbjct: 113 AENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSW-----EAMRMAVSNST 167
Query: 361 --EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES----- 413
E L + + D I AEE R + S A+N R R ++ +
Sbjct: 168 GKEKLKYNDIRDLILAEEIRRRDAGETSGS-----GSALNLETRGRGNNRNSNQGRSNSR 222
Query: 414 --------EMDSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C + + E
Sbjct: 223 NSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|440474684|gb|ELQ43412.1| hypothetical protein OOU_Y34scaffold00153g6 [Magnaporthe oryzae
Y34]
Length = 154
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 84 GKRINDDGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRA 143
G +++ +G+ ++S+KR V I +FK F++IREY+ G++ P K + A
Sbjct: 42 GSQVDAEGNPF-WEISDKRRVGISQFKKMDFINIREYYEAGGEMKPGKK--------YTA 92
Query: 144 FSKSLPAID 152
F K++PAI+
Sbjct: 93 FLKAIPAIN 101
>gi|344300326|gb|EGW30647.1| hypothetical protein SPAPADRAFT_142754 [Spathaspora passalidarum
NRRL Y-27907]
Length = 140
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 91 GDSIICKLSNKRTVAIQEFKGRAFVSIRE-YFRRDGKLVPTAKGIALTSEQW 141
G+ + +L K+ V I++F V IRE Y +DG+ P KGI+LT + W
Sbjct: 20 GEETVIELDKKKQVTIRKFNNINLVDIREFYIDKDGERKPGKKGISLTEDTW 71
>gi|403179588|ref|XP_003337923.2| hypothetical protein PGTG_19480 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165123|gb|EFP93504.2| hypothetical protein PGTG_19480 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 298
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 105/277 (37%), Gaps = 29/277 (10%)
Query: 166 SSGEQNKDVANSMTSPLELFPTELHRFNGK--NYRVWAQQIELLLKQLKVAYVLTDPCPI 223
SS Q+ DVA+ T L++ E + G NY W+ +++ V YV+ D
Sbjct: 2 SSTTQDSDVASHPT--LKITGVEQLKPPGSESNYLDWSWILDIHFTATDVDYVIHDK--- 56
Query: 224 VTLCPQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELK 283
P+ + A+ W DN I + + A+ LW+ LK
Sbjct: 57 ----PEDAK--------AKPNWARDNKAVCGVISRTIHPTNIRNVRHLKNDARGLWDALK 104
Query: 284 LVYLDEEFGTKRSQVKKYIEFQMFDEK---SVFEQALELNKIADSIVAAGMMIYENFHVS 340
+ D G ++K +M ++ + + A +++ + + + + + S
Sbjct: 105 RAHQDSSAGGVTYWLRKLTSSRMVNDDLSAHLEDMAKTFERLSSLVTSEAPLTPNDIYSS 164
Query: 341 VILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFG 400
IL+ LP W +M + ++D +KAEE R ++P VE +
Sbjct: 165 SILTSLPTDWLACVSSMMNEPRVDPDRVIDALKAEELRRKTRSSDQP--IVE-----SVS 217
Query: 401 PRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHN 437
+ S K + ++ D T C C GH C N
Sbjct: 218 QASNKKSSKSKSAKQDQPTRHCTFCNLDGHDLNRCFN 254
>gi|147806407|emb|CAN65331.1| hypothetical protein VITISV_018654 [Vitis vinifera]
Length = 1218
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 23/259 (8%)
Query: 176 NSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEV 235
NS S + + + N N++ W + + ++L + + YVL P +S
Sbjct: 72 NSKASSISVNVNNIPVLNDTNFKKWKEHVIIVLGCMDLDYVLRVDHP-----SDLTSVGT 126
Query: 236 TRVKAAERKWLNDNNIC----RHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEF 291
T+ ++A KW N I +H IL+ + + + AK +++ + E
Sbjct: 127 TKQRSAMEKWERSNRISLMIMKHSILDAIRGVI-----PEETQAKAFLDQIANRFTTNEK 181
Query: 292 GTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWK 351
++ + K + + +K++ E +E++ I + A + + E+ V ++L LP +
Sbjct: 182 IETKTILSKLVSMRYKGKKNIREYIMEMSNIVTRLKALKLELSEDILVHLVLISLPTQFS 241
Query: 352 DFCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKR 410
F I + E T L+ EEE KQE+ S + FG +KKR
Sbjct: 242 PFKISYNTQKEKWTLNELIAQCVQEEERL---KQEKIESAHLASISQRFGA-----NKKR 293
Query: 411 RESEMDSKTVVCYNCRKKG 429
+ +T V ++KG
Sbjct: 294 KRDNKGKQTAVSETSKQKG 312
>gi|147774713|emb|CAN74341.1| hypothetical protein VITISV_043997 [Vitis vinifera]
Length = 1269
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 106/278 (38%), Gaps = 47/278 (16%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+ + +F+G ++ W QIE L K+ P++ P++ +KA E L
Sbjct: 9 SGIEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPES-------MKAEEWXLL 55
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+ + + LS + + K ++ +L + L +Y K +KK +M
Sbjct: 56 DRQVLGVIRLT--LSRSVAHNVVKEKTTX-DLMKALSGMYEKPSANNKVHLMKKLFNLKM 112
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM------ 360
+ SV + E N I + + + + + ++L+ LP SW + MRM
Sbjct: 113 AENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSW-----EXMRMAVSNST 167
Query: 361 --EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES----- 413
E L + + D I AEE R + S A+N R R ++ +
Sbjct: 168 GKEKLKYNDIRDLILAEEIRRRDAGETSGS-----GSALNLETRGRGNNRNSNQGRSNSR 222
Query: 414 --------EMDSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C + + E
Sbjct: 223 NSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|440291984|gb|ELP85226.1| hypothetical protein EIN_083680 [Entamoeba invadens IP1]
Length = 127
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDE 153
I +LSN + FKG+ ++ IRE + +DGK KGI + +++ FS+ I E
Sbjct: 66 IFRLSNTKVCQKSGFKGKTYLGIREIYEKDGKYQLGKKGINMNQDEFAIFSEHFNDIKE 124
>gi|302142823|emb|CBI20118.3| unnamed protein product [Vitis vinifera]
Length = 1354
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 102/272 (37%), Gaps = 35/272 (12%)
Query: 186 PTELHR-------FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV 238
PT LH F+G N+ W ++ + L L + L P P+A+ +
Sbjct: 374 PTSLHSLASGMTIFDGSNFSEWYERGQFSLGILDLDLALISDKP-----PEATDDSTPEQ 428
Query: 239 KAAERKWLNDNNIC----RHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTK 294
+ W N + R I N + L +T A E + ++ + +
Sbjct: 429 VEQSKAWSKSNRLSLMFMRMTIANNIKTSL-----PQTEFASEFLKSVEERFKRADKSLA 483
Query: 295 RSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFC 354
+ + + + +K + + L + + + A GM + E+F V +L+ LP + F
Sbjct: 484 GTLMAELTTMKYDGQKGIQQHILNMTEKTAKLKALGMGMDESFLVQFVLNSLPSQFAPFK 543
Query: 355 IKL------MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAV-----NFGPRM 403
I + LT + + ++ +E HN + V NF P+
Sbjct: 544 IHYNTNSDQWNLNELTSKCIQEEVRLRQEG--HNLALAVTHGVTKKKGKFKKGRNFPPK- 600
Query: 404 REMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
+ + ++ TV CY C KKGHV K C
Sbjct: 601 KSGPGEGSQNHDGKFTVSCYFCGKKGHVKKDC 632
>gi|147841754|emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]
Length = 1286
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 105/278 (37%), Gaps = 47/278 (16%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+ + +F+G ++ W QIE L K+ P++ P++ +KA E L
Sbjct: 9 SGIEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPES-------MKAEEWALL 55
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+ + + LS + + K ++A +L + L +Y K +KK +M
Sbjct: 56 DRQVLGVIRLT--LSRSVAHNVVKEKTTA-DLMKALSGMYEKPSANNKVHLMKKLFNLKM 112
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM------ 360
SV + E N I + + + + + ++L+ LP SW + MRM
Sbjct: 113 AQNASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSW-----EAMRMAVSNST 167
Query: 361 --EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES----- 413
E L + + D I AEE R + S +N R R ++ +
Sbjct: 168 GKEKLKYNDIRDLILAEEIRRRDAGETSGS-----GSTLNLKTRGRGNNRNSNQGRSNSR 222
Query: 414 --------EMDSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C + + E
Sbjct: 223 NSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|186521475|ref|NP_001119194.1| RNA polymerase II transcriptional coactivator KIWI [Arabidopsis
thaliana]
gi|332003982|gb|AED91365.1| RNA polymerase II transcriptional coactivator KIWI [Arabidopsis
thaliana]
Length = 85
Score = 41.6 bits (96), Expect = 0.74, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 29/42 (69%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKG 133
D ++C +S R V+++ + G+ ++ IRE++ +DGK +P KG
Sbjct: 40 DIVVCNISKNRRVSVRNWNGKIWIDIREFYVKDGKTLPGKKG 81
>gi|108707088|gb|ABF94883.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1390
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 104/270 (38%), Gaps = 29/270 (10%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE------------- 234
++ G NY W ++++L +V +VLT PCPI E
Sbjct: 19 DIPTLKGDNYAEWKRKLDLAFILGEVDWVLTTPCPIEPAELVRGENESDADWQKRQRDNA 78
Query: 235 --VTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG 292
V ++KW N C + N + + + + E E +K + D
Sbjct: 79 PLVMSYDIEQKKWFLANKKCLAVVKNTIEPTILGSIPE-CDAVSEYLERIKSQFTDSS-K 136
Query: 293 TKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKD 352
T +Q+ K + + + V + L ++ +A + + I ++F V ++++ LP + +
Sbjct: 137 TYATQLIKQLVTERYHGGGVRDHILRMSNMASKLKPMDLGITDDFLVHLVMASLPKQFDN 196
Query: 353 FCIKL-MRMEYLTFTMLMDHIKAEEE------SRSHNKQEEPSKFVELSPAVNFGPRMRE 405
F + + E F L+ + EEE S N ++ K + SP
Sbjct: 197 FIVNYNISPEKWNFEKLIANCVQEEERIKESNGGSINYVKDKKKNHK-SPTSKGKQSQHL 255
Query: 406 MSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
+++ E D C +C+K GH K C
Sbjct: 256 PQQQQFAVEKDQ----CLHCKKTGHYKKDC 281
>gi|325186841|emb|CCA21386.1| AlNc14C121G6666 [Albugo laibachii Nc14]
Length = 99
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 104 VAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVV 156
AIQ F+ ++IRE + +DG P +GI+ ++++W+ + D A+
Sbjct: 45 CAIQTFESEVLMNIRECYEQDGYWKPGKEGISFSTDRWKKLEHQIGGTDNAIT 97
>gi|14589378|gb|AAK70633.1|AC091238_11 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|21321753|gb|AAM47288.1|AC122146_7 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31430568|gb|AAP52462.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1225
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 14/192 (7%)
Query: 177 SMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVT 236
S S + + + NG NY W +++E+ L L + Y L + P+ + E +
Sbjct: 9 SYASQISGIMGNIEQLNGSNYASWKEKLEITLAMLDIDYALHNDPPVEPRPENENYETLK 68
Query: 237 RV-KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEF-GTK 294
R+ + KW N C I + + D + T +A+E L ++E+F G+
Sbjct: 69 RIYDEVKAKWDISNRKCLMIIKSSIIDAIRVAVPD-TQTAREY-----LAKIEEQFKGSS 122
Query: 295 RSQVKKYIEFQMFDEKSVF-----EQALELNKIADSIVAAGMMIYENFHVSVILSKLPLS 349
+ I+ ++ +E+ F E ++ +A + + M I E F V I+S LP
Sbjct: 123 KVYATTLIK-RLVNERYDFSGNLREHIMKKCHMASKLKSMEMEISEGFLVHFIMSSLPQE 181
Query: 350 WKDFCIKLMRME 361
+ F I M+
Sbjct: 182 FSPFTINYNAMK 193
>gi|270011295|gb|EFA07743.1| hypothetical protein TcasGA2_TC002223 [Tribolium castaneum]
Length = 1384
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 110/270 (40%), Gaps = 24/270 (8%)
Query: 175 ANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE 234
NS S +EL N +NY W Q++ +L + L D V + P+ E
Sbjct: 3 GNSSVSRIELL-------NKENYDTWKIQMQAVL----IKCDLWDYTNGVKVKPEPG--E 49
Query: 235 VTRVKAAERKWL-NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGT 293
+ A +W+ ND IL+ S L + K +++E+W +L+ Y +
Sbjct: 50 YNQNVADINEWIKNDQKAKSEMILSISSTEL--RQIKNCVTSREMWCKLEECYQSKGPAR 107
Query: 294 KRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
K + +K I +M D V D +V + I + ++L LP ++ +F
Sbjct: 108 KATLLKNLILCKMSDGDDVRSHLNNFFASVDKLVEMNVDINPDLLAILMLYSLPPNFDNF 167
Query: 354 -CIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPR--MREMSKKR 410
C R T L I E ++R N +E S + + + G R ++++ +
Sbjct: 168 RCAIESRDNLPTPEALRIKIIEESDARKGNSRENSSGAMIANKS---GQREYKKKLTCNK 224
Query: 411 RESEMDSKT--VVCYNCRKKGHVAKHCHNK 438
+ SKT + C+ C K GH C NK
Sbjct: 225 VYNGKHSKTTEIRCFKCNKIGHRVADCRNK 254
>gi|148653019|ref|YP_001280112.1| exonuclease V subunit gamma-like protein [Psychrobacter sp. PRwf-1]
gi|148572103|gb|ABQ94162.1| Exonuclease V gamma subunit-like protein [Psychrobacter sp. PRwf-1]
Length = 1503
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 17/128 (13%)
Query: 235 VTRVKAAERKWLN--DNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG 292
++ + + + W N N+ H+L F HLY+Q ++RT++ + + ++ + G
Sbjct: 1311 ISYAEQSPKHWFNILPNSASPRHLLKFWLSHLYWQVARRTTAEQAALNDGMSIWRFNKSG 1370
Query: 293 TKRSQVKKYIEFQMFDEKSVFEQA-LELNKIADSIVAAGMMIYENFHVSVILSKLP---L 348
TK +++K F++ V+E A +EL K A I+ N + L+ LP L
Sbjct: 1371 TKAKKLEKATAFKL--GPIVYEDAVIELVKWA---------IFANLSGQIPLTLLPEYAL 1419
Query: 349 SWKDFCIK 356
+ D C+K
Sbjct: 1420 GYLDNCLK 1427
>gi|147787631|emb|CAN73722.1| hypothetical protein VITISV_041002 [Vitis vinifera]
Length = 843
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 110/281 (39%), Gaps = 48/281 (17%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +F+G ++ W QIE L + K+ P++ P+ +KA E +L D
Sbjct: 11 IEKFDGTDFAYWRMQIEDYLYRRKLH------LPLLGTKPKC-------MKADEWAFL-D 56
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ R L LS + + K + A +L + L +Y K +K M +
Sbjct: 57 RQVLRVIRLT-LSRSVVHNIVKEKTIA-DLMKALSGMYEKPSANYKVHLMKILFNLNMTE 114
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM-------- 360
SV + E N I + + + + + ++L+ LP W+ MRM
Sbjct: 115 NASVAQHLNEFNTITNQLSSVKIDFDDEICALIVLASLPNIWET-----MRMVVRNSTGK 169
Query: 361 EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMRE--------MSKKRRE 412
E L + + D I AEE Q + K A+N R R SK R
Sbjct: 170 EKLKYNDIQDLILAEEI-----HQRDAGKTSGSGSALNLETRGRGNDRNSNRGRSKSRNS 224
Query: 413 SEMDSKT-----VVCYNCRKKGHVAKHCHNKRLHQEINDNC 448
+ SK+ V C+NC K GH + C + + E ND+
Sbjct: 225 NRNISKSRSGQQVQCWNCGKTGHFRRQCKSPKKKNE-NDSA 264
>gi|389745777|gb|EIM86958.1| hypothetical protein STEHIDRAFT_111347 [Stereum hirsutum FP-91666
SS1]
Length = 276
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 35/211 (16%)
Query: 192 FNGKNYRVWAQQIE--LLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAA-------E 242
F+G ++ W Q + L+L++L DP P P+ S+ T KAA
Sbjct: 75 FDGSGFQSWWPQAQAYLMLQELWDTVTGEDPIP-----PKPSATADTDDKAAYKDSSRKN 129
Query: 243 RKWLNDNNICRHHILNFLSDHLYYQ--------YSKRTSSAKELWEELKLVYLDEEFGTK 294
+K L +C L+ L + Y + KR S+ E+WEELK EFG
Sbjct: 130 QKALGILRLCIAPNLHHLFETEYKNDPNDDDEDWKKRPSTVHEVWEELK-----TEFGKP 184
Query: 295 RSQV-----KKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLS 349
S V KK + ++ + ++ E+ I + G++I + ++L+ LP
Sbjct: 185 SSLVLFADFKKAMTIRLLANCNPIKEISEMCTIFLHLGEQGVLIPDVVKAMMLLNGLPPK 244
Query: 350 WKD---FCIKLMRMEYLTFTMLMDHIKAEEE 377
W ++ M ++ L F D I AE E
Sbjct: 245 WDTIPAIVLQGMDVDNLDFIKAKDAIIAEYE 275
>gi|116201647|ref|XP_001226635.1| hypothetical protein CHGG_08708 [Chaetomium globosum CBS 148.51]
gi|88177226|gb|EAQ84694.1| hypothetical protein CHGG_08708 [Chaetomium globosum CBS 148.51]
Length = 1357
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 410 RRESEMDSKTVVCYNCRKKGHVAKHCHNKR 439
R+ D + CYNC KKGHV ++CH+K+
Sbjct: 242 RKGGAKDKSGITCYNCDKKGHVKRNCHSKK 271
>gi|189239753|ref|XP_969432.2| PREDICTED: similar to Copia protein (Gag-int-pol protein)
[Tribolium castaneum]
Length = 1360
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 110/270 (40%), Gaps = 24/270 (8%)
Query: 175 ANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE 234
NS S +EL N +NY W Q++ +L + L D V + P+ E
Sbjct: 3 GNSSVSRIELL-------NKENYDTWKIQMQAVL----IKCDLWDYTNGVKVKPEPG--E 49
Query: 235 VTRVKAAERKWL-NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGT 293
+ A +W+ ND IL+ S L + K +++E+W +L+ Y +
Sbjct: 50 YNQNVADINEWIKNDQKAKSEMILSISSTEL--RQIKNCVTSREMWCKLEECYQSKGPAR 107
Query: 294 KRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
K + +K I +M D V D +V + I + ++L LP ++ +F
Sbjct: 108 KATLLKNLILCKMSDGDDVRSHLNNFFASVDKLVEMNVDINPDLLAILMLYSLPPNFDNF 167
Query: 354 -CIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPR--MREMSKKR 410
C R T L I E ++R N +E S + + + G R ++++ +
Sbjct: 168 RCAIESRDNLPTPEALRIKIIEESDARKGNSRENSSGAMIANKS---GQREYKKKLTCNK 224
Query: 411 RESEMDSKT--VVCYNCRKKGHVAKHCHNK 438
+ SKT + C+ C K GH C NK
Sbjct: 225 VYNGKHSKTTEIRCFKCNKIGHRVADCRNK 254
>gi|255713626|ref|XP_002553095.1| KLTH0D08822p [Lachancea thermotolerans]
gi|238934475|emb|CAR22657.1| KLTH0D08822p [Lachancea thermotolerans CBS 6340]
Length = 266
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSK 146
D+ D+I +L N + V +++F+ + IREY+ G++ P KGI+LT E + K
Sbjct: 24 DEPDAIF-ELGNNKRVTVRQFRNINLIDIREYYADSASGEMKPGKKGISLTEELYDELLK 82
Query: 147 SLPAIDEAVVKMQSK 161
ID+A+ + SK
Sbjct: 83 HRQNIDDALRRFGSK 97
>gi|77551878|gb|ABA94675.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 815
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 100/247 (40%), Gaps = 27/247 (10%)
Query: 200 WAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHHILNF 259
W ++IE+ L + LT+PCP + P+ ++ KW + N C I +
Sbjct: 12 WREKIEIALALSNIDLALTEPCPTAPVAPKYDTDHA--------KWESSNRKCLMVIKSS 63
Query: 260 LSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALEL 319
+ + + T +A E + ++ + S +K + + + V E L++
Sbjct: 64 IVEAVRGAIPVCT-TATEYLQRVENQFTISSKAYASSLIKSLVTMK-YHGGDVREYILKM 121
Query: 320 NKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL------MRMEYLTFTMLMDHIK 373
+ I + +++ ++F V +I + LP ++ F + +E L + + +
Sbjct: 122 SGITSKLKKIDLVLPDDFLVHLIFASLPSEFESFAVNYNSLPENWNIEKLIAMCVQEEDR 181
Query: 374 AEEESRSHN-----KQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKK 428
+ S N K+ S+ V A P++ R+E E D+ C C++K
Sbjct: 182 PKTRGDSANYVKNKKRNNHSQNVASPKARGKAPQVD--PNPRQEVERDA----CRWCKQK 235
Query: 429 GHVAKHC 435
GH K C
Sbjct: 236 GHFQKDC 242
>gi|333367421|ref|ZP_08459686.1| exonuclease V gamma subunit family protein [Psychrobacter sp.
1501(2011)]
gi|332978703|gb|EGK15397.1| exonuclease V gamma subunit family protein [Psychrobacter sp.
1501(2011)]
Length = 1487
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 17/128 (13%)
Query: 235 VTRVKAAERKWLN--DNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG 292
V+ + + + W N N+ H+L F HLY+Q ++RT++ + + + ++ + G
Sbjct: 1295 VSYAEQSPKHWFNILPNSASPRHLLKFWLAHLYWQVARRTTAKQVVLNDGMSIWRFNKSG 1354
Query: 293 TKRSQVKKYIEFQMFDEKSVFEQA-LELNKIADSIVAAGMMIYENFHVSVILSKLP---L 348
TK +++K F++ +E A +EL K A I+ N + L+ LP L
Sbjct: 1355 TKAKKLEKATAFKL--NPITYEDAVIELVKWA---------IFANLSGQIPLTLLPEYAL 1403
Query: 349 SWKDFCIK 356
S+ D C+K
Sbjct: 1404 SYLDNCLK 1411
>gi|115441419|ref|NP_001044989.1| Os01g0879800 [Oryza sativa Japonica Group]
gi|113534520|dbj|BAF06903.1| Os01g0879800 [Oryza sativa Japonica Group]
Length = 278
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLD-EEFGTKRSQVKK--YIEFQMFD 308
R + + + + Q +K+ +AKE+WE LK +L E R Q K + M D
Sbjct: 74 ARACLFGAVPEDVLQQIAKK-KTAKEVWESLKTRFLGVERVKKARVQTLKSDFKALHMKD 132
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMR---MEYLTF 365
+S+ E A +++ +A+ + G+ + ++ V +L +P + + + ++ + F
Sbjct: 133 TESIDEFAGKISGLANKLSDLGVTMDDDEQVKKLLDSVPDKFLHVIAAIEQFSDLDSMPF 192
Query: 366 TMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNC 425
+ +KA EE R + ++ + + + G R R R SKT+ CY C
Sbjct: 193 DEAIGRLKAYEE-RIRKRDDKNGEHLLFTSGDTSGGRSRVKKPDR------SKTM-CYYC 244
Query: 426 RKKGHVAKHC 435
++ GH A C
Sbjct: 245 QELGHFAYEC 254
>gi|147774375|emb|CAN72400.1| hypothetical protein VITISV_041204 [Vitis vinifera]
Length = 1067
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 104/276 (37%), Gaps = 47/276 (17%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +F+G ++ W QIE L K+ P++ P++ +KA E L+
Sbjct: 11 IEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPKS-------MKAEEWALLDR 57
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ + LS + + K ++ +L + L +Y K +KK +M +
Sbjct: 58 QVLGVIRLT--LSRSVAHNVVKEKTTT-BLMKALSGMYEKPSANNKVHLMKKLFNLKMAE 114
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEY------ 362
SV + E N I + + + + ++L+ LP SW+ MRM
Sbjct: 115 NASVAQHLNEFNTITNQLSFVEIDFDDEIRALIVLASLPNSWE-----AMRMAVXNSTGK 169
Query: 363 --LTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMD---- 416
L + + D I AEE R + S A+N R R ++ + +
Sbjct: 170 KKLKYNDIRDLILAEEIRRRDAGETSGS-----GSALNLETRGRGNNRNSNQGRSNSRNS 224
Query: 417 ---------SKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C N + E
Sbjct: 225 NRNRSKSRSGQQVQCWNCGKTGHFKRQCKNPKKKNE 260
>gi|30103001|gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711651|gb|ABF99446.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1393
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 107/270 (39%), Gaps = 23/270 (8%)
Query: 172 KDVANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQAS 231
K VA LEL P EL KNY W ++ +L+L+ V + L + C
Sbjct: 37 KSVAGGFEVKLELMPNELRLEGSKNYLSWCRRAQLMLRAKGVDHFLLESC---------- 86
Query: 232 SEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEF 291
E + A R W N+ ++ ++ + + + +A +W+ L +Y E
Sbjct: 87 EEPSDKESQAWRTWNTTNSTVVSWLMTSVAPSI-GRMIEAIQNAAVVWKTLSNMYSGEGN 145
Query: 292 GTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWK 351
+ + +E + ++V E A EL ++ + + ++ VI +K W
Sbjct: 146 VMMMVEAQNKVENLKQEGRTVQEYASELQQLWADLDHYDPLQLKHEDDIVIGNK----W- 200
Query: 352 DFCIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREM--SKK 409
L R + F ++ + + ++ P+ +S V R+R M +
Sbjct: 201 -----LQRRRVIHFLKGLNKEFEDRRAAMFHQATLPTMEEAISAMVQEEMRLRLMRGTNP 255
Query: 410 RRESEMDSKTVVCYNCRKKGHVAKHCHNKR 439
R + + + CYNC + GHV+ +C R
Sbjct: 256 IRSAYIAADNRECYNCGQVGHVSYNCPTSR 285
>gi|403167988|ref|XP_003889811.1| hypothetical protein PGTG_21548 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167286|gb|EHS63373.1| hypothetical protein PGTG_21548 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 292
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQ 315
+L F+S L S + + LW+ LK Y ++ ++ + + +++ S
Sbjct: 72 VLGFVSSALP---STPRFNGQGLWKLLKAQYAGDDLTSQTTALDQFLHLDFSSITSFIPS 128
Query: 316 ALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKAE 375
N+ I +G+++ + ++L KLP ++ F ++ M Y T + K E
Sbjct: 129 VRSANQ---KITMSGLILDDRVRTILMLKKLPSDYRSFR-DIVSMNYGTESFESVIKKLE 184
Query: 376 EESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
++ ++P P+ + P +++ ++ +S + VC +C+K GH +C
Sbjct: 185 SYVAQNDLDKKP-------PSTSSIPIQSLLTRPNDQASSNSNSAVCSHCKKPGHRPHNC 237
>gi|224102263|ref|XP_002312614.1| predicted protein [Populus trichocarpa]
gi|222852434|gb|EEE89981.1| predicted protein [Populus trichocarpa]
Length = 345
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 102/218 (46%), Gaps = 11/218 (5%)
Query: 168 GEQNKDVANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLC 227
GE + V + M S FNG+NY++WA ++E L+ + + + + I+
Sbjct: 5 GEFERFVGSVMDSETNFSHISTPIFNGENYQLWAVRMETYLEAMDLWEAVEEDYEIL--- 61
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P ++ +T++K+ + + + + + +S ++ + SAK++WE LK Y
Sbjct: 62 PLPNNPTMTQIKSHKER-KTKKSKAKATLFAAVSTTIFTRIMS-LKSAKDVWEYLKEEYA 119
Query: 288 DEE--FGTKRSQVKKYIEFQ-MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILS 344
+E G + + + E Q M D +++ E + L IA+ + G ++ V IL
Sbjct: 120 GDEKIRGMQSLNLIREFELQRMKDSETIKEYSDRLLGIANRVKLLGTSFLDSRIVEKILV 179
Query: 345 KLPLSWKDFCIKLMR---MEYLTFTMLMDHIKAEEESR 379
+P ++ L + +T T L++ ++A+E+ R
Sbjct: 180 TVPEKYEASITTLENTKDLSSITLTELLNALQAQEQKR 217
>gi|116196940|ref|XP_001224282.1| hypothetical protein CHGG_05068 [Chaetomium globosum CBS 148.51]
gi|88180981|gb|EAQ88449.1| hypothetical protein CHGG_05068 [Chaetomium globosum CBS 148.51]
Length = 1784
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 410 RRESEMDSKTVVCYNCRKKGHVAKHCHNKR 439
R+ D + CYNC KKGHV ++CH+K+
Sbjct: 275 RKGGAKDKSGITCYNCDKKGHVKRNCHSKK 304
>gi|147855968|emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 187 TELHRFNGKN-YRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKW 245
+E+ RF GKN + VW +++ +L Q V L D SE + A E+
Sbjct: 6 SEIERFIGKNDFNVWRMRMKAILFQQGVKDALKD-----------ESELPVTMTAKEKSD 54
Query: 246 LNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQ 305
+++ H I+ L D ++S+ T+ AK +W +L+ +Y+ + ++ F+
Sbjct: 55 IDEK--AYHLIILALGDKALREFSEETT-AKGVWNKLEQLYMQNSLSNRLYLKERLYGFK 111
Query: 306 MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
M +++S+ + + KI + G+ + + ++L LP + +F
Sbjct: 112 MQEDRSIADNLDDFAKIVLEMSNIGIKVDDEDKAVLVLKSLPGLYSNF 159
>gi|77556816|gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1198
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 402 RMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQ 442
R +E ++RRE +M K + C C++KGH+AK+C + +++
Sbjct: 209 RQKEDGQERREKDMCWKKMTCNKCKRKGHIAKYCRTREINR 249
>gi|147836233|emb|CAN64345.1| hypothetical protein VITISV_017785 [Vitis vinifera]
Length = 228
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 24/149 (16%)
Query: 166 SSGEQNKDVANSMTSPLELFPTELH----RFNGKNYRVWAQQIELLLK-QLKVAYVLTD- 219
++ E+ ++ +SM S + LH + NGKNYR WAQ I+L++ + K+ +++ +
Sbjct: 15 ATQERESEINSSMGSASAFDNSPLHLTVEKLNGKNYREWAQTIKLVINGKGKLGFLIGET 74
Query: 220 --PCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKE 277
P P T+ A KW ++N+ ++N + + Y + +
Sbjct: 75 WRPPPTDTI--------------AXHKWRSENSFITSCLINSMKPTIGKTY-MFLPTVND 119
Query: 278 LWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+W+ ++ Y D E ++ ++K ++ +QM
Sbjct: 120 VWDAIRETYSDAENASQIFELKTWL-WQM 147
>gi|3924609|gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
gi|7269781|emb|CAB77781.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
Length = 1456
Score = 41.2 bits (95), Expect = 1.0, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVL--TDPCPIVTLCPQASSEEVT 236
T+ L + + + + NY +W++Q+ L ++A L + P P T+ ++ V
Sbjct: 13 TNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI----GTDAVP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG 292
RV +W + + IL +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYG 123
>gi|440295186|gb|ELP88099.1| hypothetical protein EIN_222520 [Entamoeba invadens IP1]
Length = 192
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLP 149
D ++ ++ ++ E G V IREY G+L PT KGI L ++W KS+P
Sbjct: 123 DKVLIRIGENVFISKSEVNGEMCVDIREYNNICGRLNPTDKGILLGMKEWNTIMKSVP 180
>gi|147767446|emb|CAN62437.1| hypothetical protein VITISV_010848 [Vitis vinifera]
Length = 622
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 286 YLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSK 345
Y E+ GT++ ++ + FQM ++ V Q + + + + + + + E F ++
Sbjct: 5 YSLEDXGTQKYAIENFKNFQMTXDRDVSSQIHDYHLLINDLAIEDIKLPEPFVAGYLVET 64
Query: 346 LPLSWKDF--CIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGP-- 401
P SWKD+ +K R + +++ HIK EE++R+ + E K ELS N
Sbjct: 65 FPESWKDYKNNMKHKRKQMFLEDVII-HIKIEEQNRNRDNAE---KVKELSSKANVYKGI 120
Query: 402 -----RMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEIN 445
+ + + +R E+ KT Y+ + G V + NK L + +N
Sbjct: 121 SYAFIKYKNEVENQRNHEIIHKTTPPYSLKSNGVVER--KNKTLKEMMN 167
>gi|294877357|ref|XP_002767969.1| hypothetical protein Pmar_PMAR023898 [Perkinsus marinus ATCC 50983]
gi|239870051|gb|EER00687.1| hypothetical protein Pmar_PMAR023898 [Perkinsus marinus ATCC 50983]
Length = 193
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 374 AEEESRSHNKQEEPSKFVELSP--AVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHV 431
A + S + P ++ P V P + + S ++T++CY CR++GH+
Sbjct: 50 AHTKDTSRGEPTRPKDISDIGPISTVTIAPTPKPAGEATSFSPSTTRTMICYKCRREGHI 109
Query: 432 AKHCHNKRLHQEINDNC 448
+K+C +H + D+
Sbjct: 110 SKNCP---MHNLVTDSA 123
>gi|37806046|dbj|BAC99457.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125603444|gb|EAZ42769.1| hypothetical protein OsJ_27349 [Oryza sativa Japonica Group]
Length = 222
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 192 FNG-KNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
NG + Y W + + L L + VA+VL+D P EE A R W D+
Sbjct: 13 LNGAEGYLRWKESMLLRLHTVGVAHVLSDDPPPPPP--AGVEEEDGDAAARRRMWARDDA 70
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+CR HIL LSD ++ Y R +A++ W+ + Y + + + +Q Y + +
Sbjct: 71 VCRGHILAALSDRIFPDYV-RHRTARDAWDAVARTYDNADAASAVAQRMLYDDLAL 125
>gi|449524804|ref|XP_004169411.1| PREDICTED: LOW QUALITY PROTEIN: HD domain-containing protein
C4G3.17-like [Cucumis sativus]
Length = 309
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
D+KS+ Q+ EL KI I++ GM + + F V I++KLP WKDF
Sbjct: 1 MDDKSMEVQSHELQKIVHEIISEGMALNDQFQV--IINKLPSLWKDF 45
>gi|147768752|emb|CAN71533.1| hypothetical protein VITISV_018181 [Vitis vinifera]
Length = 1069
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 102/265 (38%), Gaps = 37/265 (13%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+ + +F+ ++ W QIE L + K+ P++ + P++ +KA E L
Sbjct: 9 SXIEKFDXTDFAYWXLQIEDYLYERKLH------LPLLGIKPES-------MKAEEWALL 55
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+ + + LS + + K ++A +L + L VY K KK +M
Sbjct: 56 DKQVLGVIRLT--LSRSVAHNVVKEKTTA-DLMKALSSVYEKSXANNKVHLXKKLFNLKM 112
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL---MRMEYL 363
+ S + E NKI + + + + + ++L+ L SWK + + E L
Sbjct: 113 AENASXAQHLNEFNKITNQLSSVEIDFDDEIRALIVLASLSNSWKTMKMAVSNSTGKEKL 172
Query: 364 TFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMR-------------EMSKKR 410
+ D I AEE R + S A+N R R + S +
Sbjct: 173 KYNDTRDLILAEEIRRRDAGKTSGS-----GSALNLEIRGRGNDRNSNQGRSKSKNSNQN 227
Query: 411 RESEMDSKTVVCYNCRKKGHVAKHC 435
R + V C+NC K GH + C
Sbjct: 228 RSKSRSGQQVQCWNCGKIGHFKRQC 252
>gi|328710796|ref|XP_003244361.1| PREDICTED: hypothetical protein LOC100574452 [Acyrthosiphon pisum]
Length = 312
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 188 ELHRFNG-KNYRVWAQQIELLLKQLKVAYVLTDPC--PIVTLCPQASSEEV-TRVKAAER 243
++++ G +N+ W QI++++ ++ V+T P++T + ++ R
Sbjct: 7 KINKLTGNENWGTWKFQIKVIMTAAEIFDVVTGKSKKPVLTKSSSETEDDARKRYGVDYS 66
Query: 244 KWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIE 303
W +N + +I+ + D + +AKE+W++L +Y + + +K+
Sbjct: 67 AWKRADNKAQKYIVTSV-DEQPLLFIMNCETAKEMWDKLLSIYEQKSATSISLLQEKFYG 125
Query: 304 FQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRME 361
+ M +S+ +L ++ + +G I ++ ++ IL LP ++K F M E
Sbjct: 126 YVMDPVESMAGHISKLENVSKQLAQSGEPISDSMLMTKILMTLPDTYKHFYSAWDSMSSE 185
Query: 362 YLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPR----------MREMSKKRR 411
T T L + EESR +Q + F E+ V+F R ++
Sbjct: 186 NKTSTNLTSRLMV-EESR---QQSKDMMFREILQVVHFQQRNCVEQIGIEKHTKIGNSEN 241
Query: 412 ESEMDSKTVVCYNCRKKGH 430
+ D K+ C +C+K GH
Sbjct: 242 QWNNDKKSGKCNHCKKPGH 260
>gi|53749347|gb|AAU90206.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1256
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 101/265 (38%), Gaps = 67/265 (25%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G ++ W ++ L L +K +V T P ++ Q +E T +
Sbjct: 148 KFTGVYFKRWQIRVTLWLTTMKCFFVSTGKPMGVLNANHQKEFDEATTLFVG-------- 199
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C IL+ L DHL ++ ++M D
Sbjct: 200 --C---ILSVLGDHLV----------------------------------EFHNYKMADN 220
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTM 367
+SV EQA E+ +A + ++ + F I++KLP SW+ F +K R EY +
Sbjct: 221 RSVVEQAHEIQTMAKELELLKCVLPDKFLAGCIIAKLPPSWRGFGTALKHKRQEY-SVEG 279
Query: 368 LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTV------- 420
+ + EE+++ +++ SK N + + SK + +++ +
Sbjct: 280 WIASLDIEEKAQ---EKDAASKGDGGQSTANVVHKAQNKSKGKYKAQQTTNFKKKNNNNN 336
Query: 421 ------VCYNCRKKGHVAKHCHNKR 439
C+ C + H+A+ C ++
Sbjct: 337 SNQDERTCFVCDQPDHLARKCPQRK 361
>gi|391657|dbj|BAA01703.1| unnamed protein product [Drosophila simulans]
Length = 1409
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 116/259 (44%), Gaps = 28/259 (10%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
F+G+ Y +W +I LL + V V+ P +E K AER
Sbjct: 11 FDGEKYAIWKFRIRALLAEQDVLKVVDGLMP---------NEVDDSWKKAER-------C 54
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKS 311
+ I+ +LSD + ++ +A+++ E L VY + ++ + K+ + ++ E S
Sbjct: 55 AKSTIIEYLSDS-FLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMS 113
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTMLM 369
+ +++ ++AAG I E +S +L LP + I+ + E LT +
Sbjct: 114 LLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVK 173
Query: 370 DHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMRE------MSKKRRESEMDSK-TVVC 422
+ + ++E + N + SK V + N + ++K ++ + +SK V C
Sbjct: 174 NRL-LDQEIKIKNDHNDTSKKVMNAIVHNKNNTYKNNLFKNRVTKPKKIFKGNSKYKVKC 232
Query: 423 YNCRKKGHVAKHC-HNKRL 440
++C ++GH+ K C H KR+
Sbjct: 233 HHCGREGHIKKDCFHYKRI 251
>gi|147772126|emb|CAN69052.1| hypothetical protein VITISV_007852 [Vitis vinifera]
Length = 1104
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 108/257 (42%), Gaps = 22/257 (8%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
N N++ W + + ++L + + Y L + P L +++E+ + ++ ER L I
Sbjct: 17 LNDTNFKKWKEHVIIVLGCMDLDYALREDRP-SDLTDASTAEQRSTMEKWERSNLMSLMI 75
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKS 311
+H I + + + AK +++ + + + + K++ + +++
Sbjct: 76 MKHSIPEAIRGAI-----PEETRAKAFLDQIANRFAANKKVETSTILSKFVSIRYKGKEN 130
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTMLMD 370
+ E +E++ + + A + + E+ V ++L LP + F I + E T L+
Sbjct: 131 IREYIMEMSNLVTRLKALKLELSEDILVHLVLISLPTQFSPFKISYNTQKEKWTLNELIA 190
Query: 371 HIKAEEESRSHNKQEEPSKFVELSPAVNFGPRM-REMSKKRRESEMDSKT---------- 419
EEE K E S + FG + R+M K +++ + +
Sbjct: 191 QCVQEEERLKEEKIESAHL---ASTSQGFGAKKKRKMDNKGKQTAVSETSKQKVQKKQDK 247
Query: 420 -VVCYNCRKKGHVAKHC 435
+ C+ C+K GH+ K C
Sbjct: 248 KITCFFCKKTGHMKKTC 264
>gi|77554134|gb|ABA96930.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 278
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 265 YYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-----EFQMFDEKSVFEQALEL 319
++ Y T KELW+ L + +FG + YI +++M D +SV EQA E+
Sbjct: 169 FWVYMHMTD-VKELWDAL-----NTKFGATDASNDLYIMEQFHDYRMADNRSVVEQAHEM 222
Query: 320 NKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
+ + ++ + F I++KLP SW+ F
Sbjct: 223 QTMPKELKLLKCVLPDKFVAGCIIAKLPPSWRSF 256
>gi|320170836|gb|EFW47735.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 135
Score = 41.2 bits (95), Expect = 1.2, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 99 SNKRTVAIQEFKGRAFVSIREYFRRD-GKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVK 157
+ KR + ++ F G+ +V IRE++ D G+L P KGI L EQ+ A I A+ K
Sbjct: 75 NGKRRITVRRFSGKKYVDIREFYDDDSGELKPGKKGIMLNEEQFTALLGMADNIRNALQK 134
Query: 158 M 158
+
Sbjct: 135 I 135
>gi|147818359|emb|CAN62623.1| hypothetical protein VITISV_001656 [Vitis vinifera]
Length = 1394
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 185 FPTELHRFNGKNYRVWAQQIELLLK-QLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAER 243
P H+ NG+NY W+Q I + ++ + K Y+ D + P+ ++ + +
Sbjct: 28 LPITAHKLNGQNYLQWSQSILMFIRGKEKDDYITGD-----SAAPETTA-------STYK 75
Query: 244 KWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEE 290
KW+ +NN+ ++N ++ + + +AKE+W+ K + D+E
Sbjct: 76 KWIAENNMVMSWLVNSMTADIGENFLS-FDTAKEIWDTAKETFSDKE 121
>gi|409080615|gb|EKM80975.1| hypothetical protein AGABI1DRAFT_127024 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 141
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 90 DGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLP 149
+GD I L K+ ++ FK + IRE++ + P KGI+LT EQW+ ++
Sbjct: 69 EGDKYI-DLGKKKRATVRSFKDIPLLDIREFYGTGSEEKPGKKGISLTLEQWQVLKENSD 127
Query: 150 AIDE 153
IDE
Sbjct: 128 TIDE 131
>gi|147792973|emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]
Length = 1493
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 103/307 (33%), Gaps = 65/307 (21%)
Query: 180 SPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVK 239
SPL L + + NGKNYR WAQ I+L++ LT + T V
Sbjct: 28 SPLHL---TIEKLNGKNYREWAQAIKLVIDGKGKLGFLTG---------ETRRPPPTDV- 74
Query: 240 AAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVK 299
AA +KW ++N+ + N + + Y +AK++W+ + Y D E ++ ++K
Sbjct: 75 AASQKWRSENSFITSCLXNSMKPSIGKTY-MFLPTAKDVWDAIXETYSDAENASQIFEIK 133
Query: 300 K---------------YIE----FQMFD---------------------EKSVFEQALEL 319
Y E +Q D + VFE L
Sbjct: 134 TRLWQMKQGDREVTEYYTEMLGLWQELDLSCEEEWECTGDSVRFKKKMENERVFEFLXGL 193
Query: 320 NKIADSIVAAGM------MIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIK 373
N+ D + + + I E F D + LT+ H
Sbjct: 194 NRELDDVRSRVLSRRXLPSIREVFSEVRREESXRRVMLDHSVGPEGSALLTYGPHGPHGP 253
Query: 374 AEEESRSHNKQEEPSKFVELSPAVNFGP-----RMREMSKKRRESEMDSKTVVCYNCRKK 428
R H+ E S + P GP R ++ S SK C +C+K
Sbjct: 254 YAIAGRGHSVGLEGSALLTYGPHGPHGPYAIAGRGPSVAXSSGPSPRQSKRTYCEHCKKL 313
Query: 429 GHVAKHC 435
GH C
Sbjct: 314 GHTKDTC 320
>gi|50287609|ref|XP_446234.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525541|emb|CAG59158.1| unnamed protein product [Candida glabrata]
Length = 277
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYFRRD--GKLVPTAKGIALTSEQWRAFSKSLP 149
D+I NKR V +++F+ + IREY+ + G++ P KGI+LT + + F +
Sbjct: 36 DAIFDLGKNKR-VTVRQFRNINLIDIREYYMDNATGEMRPGKKGISLTEDLYDEFLRHRL 94
Query: 150 AIDEAVVKMQSK 161
ID+A+ ++ SK
Sbjct: 95 NIDDALRRLGSK 106
>gi|357496063|ref|XP_003618320.1| Phytoalexin-deficient 4-2 protein [Medicago truncatula]
gi|355493335|gb|AES74538.1| Phytoalexin-deficient 4-2 protein [Medicago truncatula]
Length = 905
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 116/303 (38%), Gaps = 70/303 (23%)
Query: 192 FNGKNYRVWAQQIELLLKQLK--VAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
F+G NY W ++EL L+ + V+TD V L + E + +VK+A W D
Sbjct: 19 FDGSNYYFWKGKMELFLRSQDNDMWTVITDG-DFVPL----TKEGIIKVKSA---WSTDE 70
Query: 250 NICRHHILN-----FLSDHLYYQYSKRTS---SAKELWEELKLVYLDEEFGTKRSQ---- 297
+LN FLS L + S+R +AKE+W+ LK V+ + K ++
Sbjct: 71 KA--QVLLNSKARLFLSCALTMEESERVDECKNAKEVWDTLK-VHHEGTSHVKETRIDIG 127
Query: 298 VKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL 357
V+K+ F+M + +++ E I + + + G + + IL LP W+ +
Sbjct: 128 VRKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHERIRKILRCLPSMWRPMVTAI 187
Query: 358 MR---MEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPA------------------ 396
+ ++ + L+ ++A E +K + K + L +
Sbjct: 188 TQAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVKSLALKASQQTSSVTEDDLQETQEIE 247
Query: 397 -----------VNFGPRMREMSKKRRE-------------SEMDSKTVVCYNCRKKGHVA 432
R++ M +R + +E D V C+ C K GH
Sbjct: 248 EVHEEEAEDELALISKRIQRMMMRRNQIRKKFPNTSNNNRTETDKSQVTCFGCNKTGHYK 307
Query: 433 KHC 435
C
Sbjct: 308 SEC 310
>gi|302678045|ref|XP_003028705.1| hypothetical protein SCHCODRAFT_237096 [Schizophyllum commune H4-8]
gi|300102394|gb|EFI93802.1| hypothetical protein SCHCODRAFT_237096 [Schizophyllum commune H4-8]
Length = 900
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 45/261 (17%)
Query: 196 NYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHH 255
++ + +Q+ + ++ Y+ TL P A+ E + AE +WL + +
Sbjct: 23 DWHAFKEQLARFFRAIQAGYI--------TLDPAAAVPEAKKPLDAELEWLLFSKLGPDS 74
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQ 315
+ K K LW+ LK Y ++ KR +K + D E
Sbjct: 75 M----------ALVKEAEGGKALWKVLKEKY-EKATPWKRMHARKAFQQCRHDPSHPIET 123
Query: 316 ALELNKIADSIVAA-GMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKA 374
+ K +I+ G+ + ++ + VIL L S+ CI ++ LT + + + +
Sbjct: 124 HIANVKAQKAILTGLGVTVSDDEVMDVILINLDDSFDQICINILSQSSLTLDVAISMLTS 183
Query: 375 EEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES------------EMDSKTVV- 421
+ + KQEE F L AVN R S++ +ES MD K
Sbjct: 184 NSGAAFNVKQEE---FTPLLLAVNAARTGR--SRQEQESLADGGQNDPTTFWMDDKEYCW 238
Query: 422 -------CYNCRKKGHVAKHC 435
C+ C + GH+A C
Sbjct: 239 CNVNSRDCHRCGRSGHIAAFC 259
>gi|225714662|gb|ACO13177.1| Activated RNA polymerase II transcriptional coactivator p15
[Lepeophtheirus salmonis]
gi|290561549|gb|ADD38175.1| Activated RNA polymerase II transcriptional coactivator p15
[Lepeophtheirus salmonis]
Length = 120
Score = 40.8 bits (94), Expect = 1.3, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 90 DGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKL--VPTAKGIALTSEQWRAFSKS 147
DG L N + V ++EFKG+ +V IREY+ + P KGI+L + Q++ +
Sbjct: 52 DGKEPSWHLGNNKHVKVREFKGKTYVDIREYYVDKSTMDTKPGKKGISLNTLQYQELKQI 111
Query: 148 LPAIDEAV 155
+ ID ++
Sbjct: 112 ISQIDASL 119
>gi|147828211|emb|CAN71109.1| hypothetical protein VITISV_001479 [Vitis vinifera]
Length = 1246
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 88/241 (36%), Gaps = 39/241 (16%)
Query: 232 SEEVTRVKAAERKWLNDNNICRHHILNFLSD---HLYYQYSKRTSSAKELW-----EELK 283
+EE + E+ D R I ++L HL +K S E W + L
Sbjct: 2 AEEAGKASGIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQALS 61
Query: 284 LVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVIL 343
+Y K +KK +M + SV + E N I + + + + + ++L
Sbjct: 62 GMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVL 121
Query: 344 SKLPLSWKDFCIKLMRM--------EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSP 395
+ LP SW+ MRM E L + + D I AEE R + S
Sbjct: 122 ASLPNSWE-----AMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGS-----GS 171
Query: 396 AVNFGPRMREMSKKRRESEMD-------------SKTVVCYNCRKKGHVAKHCHNKRLHQ 442
A+N R R ++ + + + V C+NC K GH + C + +
Sbjct: 172 ALNLETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKN 231
Query: 443 E 443
E
Sbjct: 232 E 232
>gi|242095220|ref|XP_002438100.1| hypothetical protein SORBIDRAFT_10g008010 [Sorghum bicolor]
gi|241916323|gb|EER89467.1| hypothetical protein SORBIDRAFT_10g008010 [Sorghum bicolor]
Length = 234
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 196 NYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHH 255
Y W + + L + L VA VL + P A++++ R D+ +CR H
Sbjct: 14 GYLRWKESVLLRVHTLGVARVLFEDRPSGNGDDAAAAKKWAR----------DDAVCRGH 63
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQ 315
IL LSD L Y R ++A +LW L Y T R K+ F+ F+E +
Sbjct: 64 ILATLSDRLLPDY-HRFATAADLWRALARTY---HVDTPRVWRDKFDAFE-FEEGAGGAV 118
Query: 316 ALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
LE A+++ A + E F + +LP
Sbjct: 119 LLEQIAHAEALGVAARLP-EGFVAYELCGRLP 149
>gi|7746|emb|CAA31997.1| unnamed protein product [Drosophila melanogaster]
gi|7750|emb|CAA38086.1| VLP protein [Drosophila melanogaster]
gi|1491680|emb|CAA26445.1| ORF [Drosophila melanogaster]
Length = 426
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 111/272 (40%), Gaps = 54/272 (19%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
F+G+ Y +W +I LL + V V+ P + W
Sbjct: 11 FDGEKYAIWKFRIRALLAEQDVLKVVDGLMP----------------NEVDDSWKKAERC 54
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI--------- 302
+ I+ +LSD + ++ +A+++ E L VY + ++ + K+ +
Sbjct: 55 AKSTIIEYLSDS-FLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMS 113
Query: 303 ---EFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKL 357
F +FDE + ++AAG I E +S +L LP + I+
Sbjct: 114 LLSHFHIFDE------------LISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIET 161
Query: 358 MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRM-------REMSKKR 410
+ E LT + + + ++E + N + SK V ++ V+ ++K +
Sbjct: 162 LSEENLTLAFVKNRL-LDQEIKIKNDHNDTSKKV-MNAIVHNNNNTYKNNLFKNRVTKPK 219
Query: 411 RESEMDSK-TVVCYNCRKKGHVAKHC-HNKRL 440
+ + +SK V C++C ++GH+ K C H KR+
Sbjct: 220 KIFKGNSKYKVKCHHCGREGHIKKDCFHYKRI 251
>gi|147770274|emb|CAN65078.1| hypothetical protein VITISV_009543 [Vitis vinifera]
Length = 495
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 16/170 (9%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
+ +G N++ W +QI ++L + + Y L++P P + +SE K KW N
Sbjct: 12 QLSGANFKKWKEQIGIVLGCMDLHYALSEPIP-----TKPTSESSNEQKVLYEKWGRFN- 65
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEF-GTKRSQVK----KYIEFQ 305
H L + + S++ +K + E+F GT +S K I +
Sbjct: 66 ---HMSLMIMKGSITPAIRGAISNSNNAMSYIKSI--GEQFIGTCKSLASTLMIKQITMK 120
Query: 306 MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCI 355
V E ++++ +A + M I E F V I++ LP + F I
Sbjct: 121 YDGHSGVCEHIMKMSDMASQLKGMDMAISEGFLVHFIMTSLPSQFGPFKI 170
>gi|14475941|gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 40.8 bits (94), Expect = 1.4, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQAS--SEEVT 236
TS L + + + + NY +W++Q+ L ++A L T P A+ ++
Sbjct: 13 TSILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGS----TTMPPATIGTDAAP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + +L +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWK 351
R+Q+K++ + K++ + L D + G + + V +L LP +K
Sbjct: 128 LRTQLKQWTK----GTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYK 181
>gi|14475946|gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 40.8 bits (94), Expect = 1.4, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQAS--SEEVT 236
TS L + + + + NY +W++Q+ L ++A L T P A+ ++
Sbjct: 13 TSILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGS----TTMPPATIGTDAAP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + +L +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWK 351
R+Q+K++ + K++ + L D + G + + V +L LP +K
Sbjct: 128 LRTQLKQWTK----GTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYK 181
>gi|147780308|emb|CAN61435.1| hypothetical protein VITISV_033767 [Vitis vinifera]
Length = 1298
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 107/278 (38%), Gaps = 47/278 (16%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+ + +F+G ++ W QIE L K+ P++ P++ +KA E L
Sbjct: 9 SGIEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPES-------MKAEEWALL 55
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+ + + LS + + K ++A +L + L +Y K +KK +M
Sbjct: 56 DRQVLGVIRLT--LSRSVAHNVVKEKTTA-DLMKALSGMYEKPSANNKVHLMKKLFNLKM 112
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM------ 360
+ SV + E N I + + + + ++L+ LP SW + MRM
Sbjct: 113 AENASVAQHLNEFNTITKQLSSVEIDFDDEIRALIVLTSLPNSW-----EAMRMAVSNST 167
Query: 361 --EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES----- 413
E L + + D I A+E +Q + + A+N R R ++ +
Sbjct: 168 GKEQLKYNDIRDLILAKE-----IRQRDAGETSGSGSALNLETRGRGNNRNSNQGRSNSR 222
Query: 414 --------EMDSKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C + + E
Sbjct: 223 NSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|218201169|gb|EEC83596.1| hypothetical protein OsI_29278 [Oryza sativa Indica Group]
Length = 254
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Query: 175 ANSMTSPLELFPTELHRFNGKN-YRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSE 233
ANS + T + NG + Y W + + L L + VAYVL D P AS E
Sbjct: 12 ANSQHVLALIMATTVRPLNGADGYLRWKESMLLRLHTVGVAYVLFDDPPPAPAPGPASGE 71
Query: 234 E-----VTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVY 286
E AA RK D+ +CR HIL LSD ++ Y R +A+ WE + Y
Sbjct: 72 EESAAAAAAAAAARRKRARDDAVCRGHILTALSDRIFPDYV-RHGTARAAWEAVARTY 128
>gi|327268958|ref|XP_003219262.1| PREDICTED: copia protein-like [Anolis carolinensis]
Length = 1138
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 104/249 (41%), Gaps = 29/249 (11%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVT--RVKAAERKWLNDN 249
N N+ W ++ +LL+ +V C I CP+++ E ++ +VK A+ ++L +
Sbjct: 14 LNSHNFHYWHDKVLILLEYERVL-----DC-IERTCPESNEEAISDWKVKDAKARYLITS 67
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
++ ++ Y + +AK++ + LK + +K+ ++ ++ D+
Sbjct: 68 SLKTKQMM----------YVRDCVTAKDMLDALKRTFGHISKLAAIGLLKRLMKTELNDK 117
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFH-VSVILSKLPLSWKDFCIKLMRMEYLTFTML 368
K + ++ D + +G +I E+FH V +++ L + F + +TF +
Sbjct: 118 KECDKHLENFKEMLDKLKMSGFII-EDFHKVGLLIGSLGNIFDPFLSSIESNPDITFNL- 175
Query: 369 MDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRR--ESEMDSKTVVCYNCR 426
A R + S V+ SP N M S K C+NC
Sbjct: 176 -----AVARFRDFCNDQHRSSHVD-SPKANESSYMASSRHPHSGGASRDSPKGSTCFNCG 229
Query: 427 KKGHVAKHC 435
K GH+A+ C
Sbjct: 230 KFGHIARFC 238
>gi|18029448|gb|AAL56547.1|AF387862_1 gag polyprotein [Anopheles gambiae]
Length = 476
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 22/180 (12%)
Query: 257 LNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQA 316
+ L D + + +AK W+ L+ + TK S +KK + + +DE E
Sbjct: 59 IALLVDDCQHPLIRDCKTAKGTWDALQKHHQKTTMSTKVSLLKKLCKAE-YDESGDMEAH 117
Query: 317 L-ELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKAE 375
L ++++ S++ AG + + V+++L +P S+ L TM + K
Sbjct: 118 LFRMDELFSSLMNAGQELDSSLKVAMVLKSMPESYDHLTTTLETRSDDDLTMELVKSKLL 177
Query: 376 EESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
+E++ ++ S+ + + GP K + C+ CRK GH+ + C
Sbjct: 178 DEAQKRMEKSHQSESI-----LRVGPE---------------KKITCHRCRKPGHMKRDC 217
>gi|449475116|ref|XP_004154380.1| PREDICTED: uncharacterized protein LOC101218030 [Cucumis sativus]
Length = 119
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
+ NG NY W + +L + +VLT+ CP P +++ +R A +W+ N
Sbjct: 13 KLNGDNYAAWKSNLNTILVVDDLRFVLTEECP---QNPTSNANRTSR--DAYDRWIKANE 67
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIE 303
+IL +SD L ++ + ++AKE+ + L+ ++ E+ + VK E
Sbjct: 68 KASVYILASMSDVLAKKH-ESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYE 119
>gi|444321999|ref|XP_004181655.1| hypothetical protein TBLA_0G01940 [Tetrapisispora blattae CBS 6284]
gi|387514700|emb|CCH62136.1| hypothetical protein TBLA_0G01940 [Tetrapisispora blattae CBS 6284]
Length = 312
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSLP 149
D+I NKR V +++F+ + IREY+ G++ P KGI+LT + + K
Sbjct: 48 DAIFDLGKNKR-VTVRQFRNMNLIDIREYYMDSSTGEMRPGKKGISLTEDLYDELLKHRL 106
Query: 150 AIDEAVVKMQSK 161
IDEA+ ++ SK
Sbjct: 107 NIDEALRRLGSK 118
>gi|53980837|gb|AAV24758.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1206
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 111/267 (41%), Gaps = 36/267 (13%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAE--RKWL 246
+ + NG NY W +++E+ L L + Y L + P++ P+ + E + + E KW
Sbjct: 4 IEQLNGSNYASWKEKLEITLALLDIDYALHN-NPLIEPRPENENYETLKKEYDEVKAKWD 62
Query: 247 NDNN----ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEF-GTKRSQVKKY 301
N I + I++ + + T +A+E L ++E+F G+ +
Sbjct: 63 ISNRKFLMIIKSSIIDAIRGAV-----PETQTAREY-----LAKVEEQFKGSSKVYATTL 112
Query: 302 IEFQMFDEKSVF-----EQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIK 356
I+ ++ +EK F E ++ +A + + M I E V I+S LP + F I
Sbjct: 113 IK-RLVNEKYDFTGNLREHVMKKCHVAFKLKSMEMKISEGLLVHFIMSSLPQEFSPFTID 171
Query: 357 L--MRMEYLTFTMLM------DHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSK 408
M++++ ++ + +KAE ++ + K + P+ R
Sbjct: 172 YNAMKIKWGIDELIAMCVQEEERLKAERVDHANLFKHSEKKRYKKFKKEFLKPKPRNPYT 231
Query: 409 KRRESEMDSKTVVCYNCRKKGHVAKHC 435
+ + E D CY C K GH K C
Sbjct: 232 EEKGKEKDG----CYFCGKSGHRQKDC 254
>gi|77552408|gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1407
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV-KAAERKWLN 247
+ + NG NY W +++E+ L L + Y L + P+ + E + R+ + KW
Sbjct: 21 IEQLNGSNYASWKEKLEITLALLDIDYALHNDPPVEPRPENENYETLKRIYDEVKAKWDI 80
Query: 248 DNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEF-GTKRSQVKKYIEFQM 306
N C I + + D + T +A+E L ++E+F G+ + I+ ++
Sbjct: 81 SNRKCLMIIKSSIIDAI-RGVVPDTQTAREY-----LAKIEEQFKGSSKVYATTLIK-RL 133
Query: 307 FDEKSVF-----EQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRME 361
+E+ F E ++ +A + + M I E F V I+S LP + F I M+
Sbjct: 134 VNERYDFTGNLREHIMKKCHMASKLKSMEMEISEGFLVHFIMSSLPQEFSSFTINYNAMK 193
>gi|344258273|gb|EGW14377.1| Activated RNA polymerase II transcriptional coactivator p15
[Cricetulus griseus]
Length = 59
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 102 RTVAIQEFKGRAFVSIREYF-RRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKM 158
R V++++FKG+ REY+ +G++ KGI+L EQW + + ID+ V K+
Sbjct: 2 RYVSVRDFKGQIPFDFREYWMDSEGEMKSGRKGISLNVEQWSQLKEQISDIDDTVRKL 59
>gi|302503986|ref|XP_003013952.1| RNA polymerase II transcriptional coactivator, putative
[Arthroderma benhamiae CBS 112371]
gi|291177519|gb|EFE33312.1| RNA polymerase II transcriptional coactivator, putative
[Arthroderma benhamiae CBS 112371]
Length = 170
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAK 132
+S +R V I FKGR V++REY+ +DG+ +P K
Sbjct: 61 ISRQRRVTISTFKGRVLVNVREYYEKDGQELPGKK 95
>gi|147799759|emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera]
Length = 1625
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 17/109 (15%)
Query: 191 RFNGKNYRVWAQQIELLLK-QLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+ G NY +W+Q +E+ + + K+ Y+ D S + + R+W +N
Sbjct: 27 KLEGSNYALWSQVVEMYISGKDKLGYINGD------------SPQPPETDPSFRRWRTEN 74
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
I + ++N + L + +AK++W+ + Y D GT SQV
Sbjct: 75 AIVKGWLINSMDPSLIANFIX-FPTAKQVWDSAAITYFD---GTDTSQV 119
>gi|147775375|emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera]
Length = 885
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 78/200 (39%), Gaps = 26/200 (13%)
Query: 243 RKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI 302
R+W+ DNN+ H +A+ LW +L+ +Y + K +KK I
Sbjct: 29 RQWV-DNNVFNH--------------VSEEKNAQSLWNKLEQLYARKTGNNKFFLIKKMI 73
Query: 303 EFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEY 362
+ D + + I + + + E +L L SW+ F L
Sbjct: 74 SLKYQDGTPMRDHLNTFQGIINQLARMNIKFEEEVQGLWLLGTLSDSWETFRTSLSN-SA 132
Query: 363 LTFTMLMDHIKA---EEESRSHNKQEEPSKFVELSP----AVNFGPRMREMSKKRRESEM 415
TM MD +K+ EE R ++ V ++ + + GP+ R+ SK +
Sbjct: 133 PDGTMNMDLVKSCILNEEMRRKSQGSSSQSNVLITEKRGRSKSIGPKNRDRSKSKTNK-- 190
Query: 416 DSKTVVCYNCRKKGHVAKHC 435
V C+ C KGH+ K+C
Sbjct: 191 -FANVECHYCHLKGHIRKYC 209
>gi|367007268|ref|XP_003688364.1| hypothetical protein TPHA_0N01490 [Tetrapisispora phaffii CBS 4417]
gi|357526672|emb|CCE65930.1| hypothetical protein TPHA_0N01490 [Tetrapisispora phaffii CBS 4417]
Length = 314
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSLP 149
D+I NKR V +++F+ + IREY+ ++ P KGI+LT + + F K
Sbjct: 52 DAIFDIGKNKR-VTVRQFRNINLIDIREYYMDNSSNEMRPGKKGISLTEDLYDEFLKHRL 110
Query: 150 AIDEAVVKMQSK 161
IDEA+ ++ SK
Sbjct: 111 NIDEALRRLGSK 122
>gi|11994262|dbj|BAB01445.1| gag-pol polyprotein-like [Arabidopsis thaliana]
Length = 411
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 118/269 (43%), Gaps = 26/269 (9%)
Query: 196 NYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAE-RKWLN---DNNI 251
+Y W+ ++ L + V V+ + V+ P + E +KA + +W N +N
Sbjct: 14 DYEDWSPMVKTRLVENGVWDVVQNG---VSPNPTTNPELAATIKAVDLAQWRNLVVKDNK 70
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKS 311
+ + L D ++ + + +SAKELW+ LK +E +R + K++ M++ +
Sbjct: 71 ALKIMQSSLPDSVFRK-TISIASAKELWDLLKKGNDTKEAKLRRLE-KQFENLMMYEGER 128
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLM-- 369
+ L KI + + G I ++ ++ +L+ LP S+ D + +++ E++T L
Sbjct: 129 MKLYLKRLEKIIEELFVLGNPISDDKVIAKLLTSLPRSYDD-SVPVLK-EFMTLPELTHR 186
Query: 370 DHIKAEEESRSHNKQ--EEPSKFVEL-----------SPAVNFGPRMREMSKKRRESEMD 416
D +KA E S K +E KF+ + S + + R +
Sbjct: 187 DLLKAFEMFGSDPKTMPQELMKFIMILRRAWSERMWCSACETYNHNQEDCYYNPRVVYLG 246
Query: 417 SKTVVCYNCRKKGHVAKHCHNKRLHQEIN 445
C+ C ++GH A+ C N R Q I+
Sbjct: 247 GGRGQCFQCGERGHFARDCCNTRNLQPID 275
>gi|345511|pir||PC1232 copia polyprotein - fruit fly (Drosophila simulans) retrotransposon
copia (fragments)
Length = 787
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 116/259 (44%), Gaps = 28/259 (10%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
F+G+ Y +W +I LL + V V+ P +E K AER
Sbjct: 11 FDGEKYAIWKFRIRALLAEQDVLKVVDGLMP---------NEVDDSWKKAER-------C 54
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKS 311
+ I+ +LSD + ++ +A+++ E L VY + ++ + K+ + ++ E S
Sbjct: 55 AKSTIIEYLSDS-FLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMS 113
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTMLM 369
+ +++ ++AAG I E +S +L LP + I+ + E LT +
Sbjct: 114 LLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVK 173
Query: 370 DHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMRE------MSKKRRESEMDSK-TVVC 422
+ + ++E + N + SK V + N + ++K ++ + +SK V C
Sbjct: 174 NRL-LDQEIKIKNDHNDTSKKVMNAIVHNKNNTYKNNLFKNRVTKPKKIFKGNSKYKVKC 232
Query: 423 YNCRKKGHVAKHC-HNKRL 440
++C ++GH+ K C H KR+
Sbjct: 233 HHCGREGHIKKDCFHYKRI 251
>gi|270016533|gb|EFA12979.1| hypothetical protein TcasGA2_TC004282 [Tribolium castaneum]
Length = 1175
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 109/250 (43%), Gaps = 25/250 (10%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLN 247
E+ +F+GK+Y W ++E++L V + + E T + +L
Sbjct: 10 EITQFDGKDYDHWKFRMEIILDHHDVKRCIEE-------------ENAT----PDDAFLK 52
Query: 248 DNNICRHHILNFLSD-HLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+ C+ I+ +++ HL QY K ++A ++W L+ + + ++ KK + ++
Sbjct: 53 MDKKCKSLIIQCIANSHL--QYVKDKTTAYQMWISLEAGFQRKGITSQLFLRKKLLTMKL 110
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFT 366
++ + L+ + + + G + E V +L P S+ L ME T
Sbjct: 111 SSNDTMEKHFLKFEETIRELKSVGAKLEEMDVVCHLLLTFPKSFDPLVTALETMEPSKLT 170
Query: 367 MLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCR 426
+ D +K + + ++ + S+ +E+ + F R + +K++ + +C+NC
Sbjct: 171 L--DFVKGKLLNYELKRKNQCSE-IEVPGSSAFNSR--KFNKQQSVWNKNVFPFMCHNCG 225
Query: 427 KKGHVAKHCH 436
KKGH CH
Sbjct: 226 KKGHKRADCH 235
>gi|294877361|ref|XP_002767971.1| hypothetical protein Pmar_PMAR023900 [Perkinsus marinus ATCC 50983]
gi|239870053|gb|EER00689.1| hypothetical protein Pmar_PMAR023900 [Perkinsus marinus ATCC 50983]
Length = 303
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 374 AEEESRSHNKQEEPSKFVELSPA--VNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHV 431
A + S + P ++ P V P + + S ++ ++CY CR++GH+
Sbjct: 87 AHTKDTSRGEPTRPKDISDIGPTSTVTIAPTPKPAGEATLFSPSTTRKMICYKCRREGHI 146
Query: 432 AKHCHNKRLHQEINDN 447
+K+C +H + DN
Sbjct: 147 SKNCP---MHNLVTDN 159
>gi|225447578|ref|XP_002270154.1| PREDICTED: uncharacterized protein LOC100264911 [Vitis vinifera]
Length = 1946
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 196 NYRVWAQQIELLLKQLKVAYVLT--DPCPIVTLCPQASSEEVTRVKAAERK-----WLND 248
NY +W +Q L + ++ LT DP P P ++ A + W
Sbjct: 124 NYPLWREQALALAESQELLGHLTNEDPAPPQYTIPDFNNTPTAETSAPRKTEAYITWRKA 183
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDE----EFGTKRSQVKKYIEF 304
+ + R I+ LS+ + + ++WE LK Y ++ EF T R QV Y+
Sbjct: 184 DRLLRGWIIGTLSEETL-GLAMGLDTTNDVWEALKNAYAEDSQEREF-TLRQQVT-YLRK 240
Query: 305 QMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLT 364
+ D+K++ E + DS+ A G + + V +L+ L ++ F +++ +
Sbjct: 241 E--DDKTIGEHIRTFKSLCDSLAAIGKPVPDKEKVFCLLTSLGPQYETFTTTMLKPPRPS 298
Query: 365 FTMLMDHIKAEEESRS 380
++ L+ +++ ++ R+
Sbjct: 299 YSELVSQLQSLDQRRN 314
>gi|147798862|emb|CAN65770.1| hypothetical protein VITISV_018354 [Vitis vinifera]
Length = 2829
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 402 RMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEIND 446
R+ + ++KR E+ +D K ++C+ C K GH K C R+ Q+IN+
Sbjct: 617 RVNKDTQKRVETPLDVKPIICFKCGKVGHFKKDC---RVKQKINN 658
>gi|147837097|emb|CAN61558.1| hypothetical protein VITISV_035098 [Vitis vinifera]
Length = 320
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 106/262 (40%), Gaps = 35/262 (13%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN- 250
N N++ W + + ++L + + Y L + P P +S T+ ++ KW N+
Sbjct: 25 LNDTNFKKWKEHVIIVLGCMDLDYALREDRP-----PDLTSASTTKQRSIMEKWERSNHM 79
Query: 251 ---ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMF 307
I +H I + + + K +++ + E + + + K + +
Sbjct: 80 SLMIMKHSIPEAIRGA-----TPEETRVKAFLDQIVNRFAANEKIERNTILSKLVSMRYK 134
Query: 308 DEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFT 366
++++ E +E++ + + + + E+ V ++L LP + F I + E T
Sbjct: 135 GKENIREYIMEISNLVTRLKTLKLELSEDILVHLVLISLPTQFSPFKISYNTQKEKWTLN 194
Query: 367 MLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPR-------------MREMSKKRRES 413
L+ EEE KQE+ S + FG + MSK++++
Sbjct: 195 ELIAQCVQEEERL---KQEKIESAHLASTSQGFGTSKKRKRDNKRKQTSVSGMSKQKKQD 251
Query: 414 EMDSKTVVCYNCRKKGHVAKHC 435
K + C+ C+K GH+ K C
Sbjct: 252 ----KEITCFFCKKAGHMKKTC 269
>gi|426197530|gb|EKV47457.1| hypothetical protein AGABI2DRAFT_70431, partial [Agaricus bisporus
var. bisporus H97]
Length = 76
Score = 40.4 bits (93), Expect = 2.1, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 90 DGDSIICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLP 149
+GD I L K+ ++ FK + IRE++ + P KGI+LT EQW+ ++
Sbjct: 4 EGDKYI-DLGKKKRATVRSFKDIPLLDIREFYGTGSEEKPGKKGISLTLEQWQVLKENSD 62
Query: 150 AIDE 153
IDE
Sbjct: 63 TIDE 66
>gi|147784796|emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera]
Length = 649
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 13/168 (7%)
Query: 276 KELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYE 335
+ LW +L+ +Y + K +KK I + D + + I + +V + E
Sbjct: 34 QSLWNKLEQLYARKTGNNKIFLIKKMISLKYQDGTPMIDHLNTFQGIINQLVGMNIKFEE 93
Query: 336 NFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKA---EEESRSHNKQEEPSKFVE 392
+L L SW+ F L + TM MD +K+ EE R Q PS+
Sbjct: 94 EVQGLWLLGTLSDSWETFRTSL-SISAPDGTMNMDLVKSCVLNEEMR-RKLQGPPSQSDV 151
Query: 393 L-----SPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
L + + GP+ ++ SK + ++ V C+ C KGH+ K+C
Sbjct: 152 LVTEKRGRSKSRGPKNKDRSKSKTNKFVN---VECHYCHLKGHIRKYC 196
>gi|147864970|emb|CAN83623.1| hypothetical protein VITISV_010870 [Vitis vinifera]
Length = 1601
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 106/269 (39%), Gaps = 10/269 (3%)
Query: 169 EQNKDVANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCP 228
EQ K + T+ + + NG N++ W + + +LL + + L P P L
Sbjct: 341 EQTKTASFISTTSISANINNVPMLNGTNFKDWKENMMILLGCMDIDLALRMPKP-DELNE 399
Query: 229 QASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLD 288
Q++ E+ + KW N + + + + + ++A + E++ +
Sbjct: 400 QSTQED----EVYWGKWERSNRLSLMIMKRGIPEAFRGAVTDEVTNASDFLAEIQKRFAK 455
Query: 289 EEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPL 348
+ + + I + + +V +E++ +A + A + + ++ V ++L LP
Sbjct: 456 NDKAETSTLLASLISMKYNGKGNVRXYIMEMSHLASKLKALKLELSDDLLVHLVLISLPA 515
Query: 349 SWKDFCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMS 407
+ F + + + T L+ EEE +K E S + + G R +++
Sbjct: 516 QFNQFKVSYNCQKDKWTLNELISFCVQEEERLKQDKTESAHL---ASTSKDKGKRKNKVA 572
Query: 408 KKRRESEMDSKT-VVCYNCRKKGHVAKHC 435
+ K V C+ C K GH K C
Sbjct: 573 ASNGPEQKKXKVEVTCFFCNKPGHTKKEC 601
>gi|91095357|ref|XP_966839.1| PREDICTED: hypothetical protein, partial [Tribolium castaneum]
Length = 306
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 107/269 (39%), Gaps = 22/269 (8%)
Query: 175 ANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE 234
NS S +EL N +NY W Q++ +L + L D V + P+ +
Sbjct: 3 GNSSVSRIELL-------NKENYDTWKIQMQAVL----IKCDLWDYTNGVKVKPEPGEDN 51
Query: 235 VTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTK 294
E W+ +N + ++ +S Q K +++E+W +L+ Y + K
Sbjct: 52 QNVADINE--WIKNNQKAKSEMILSISSTELRQI-KNCVTSREMWCKLEECYQSKGPPRK 108
Query: 295 RSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF- 353
+ +K I +M D V D +V + I + ++L LP ++ +F
Sbjct: 109 ATLLKNLILCKMSDGDDVRSHLNNFFASVDKLVEMNVDINPDLLAILMLYSLPPNFDNFR 168
Query: 354 CIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPR--MREMSKKRR 411
C R T L I E ++R N +E S + A G R ++++ +
Sbjct: 169 CAIESRDNLPTPEALRIKIIEESDARKGNSRENSSGAM---IANKSGQREYKKKLTCNKV 225
Query: 412 ESEMDSKT--VVCYNCRKKGHVAKHCHNK 438
+ SKT + C+ C K GH C NK
Sbjct: 226 YNGKHSKTTEIRCFKCNKIGHRVADCRNK 254
>gi|147801115|emb|CAN75466.1| hypothetical protein VITISV_025054 [Vitis vinifera]
Length = 1576
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 185 FPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERK 244
P H+ NG+NY W+Q I + ++ + +T + P+ ++ + +K
Sbjct: 152 LPITXHKLNGQNYLQWSQSILMFIRGXEKDDYITG----ASAAPETTA-------STYKK 200
Query: 245 WLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEE 290
W+ +NN+ ++N ++ + + +AKE+W+ K + D+E
Sbjct: 201 WIAENNMVMSWLVNSMTADIGENFLS-FDTAKEIWDTAKETFSDKE 245
>gi|150865191|ref|XP_001384308.2| hypothetical protein PICST_31143 [Scheffersomyces stipitis CBS
6054]
gi|149386447|gb|ABN66279.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 141
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSLP 149
D ++ +L K+ V I++F V IRE++ + G+ P KGI+LT + W S
Sbjct: 22 DEVVIELDKKKQVTIRKFNNINLVDIREFYIDKDSGEKKPGKKGISLTEDTWYKLLDSTN 81
Query: 150 AIDEAV 155
I A+
Sbjct: 82 KIQSAL 87
>gi|401838369|gb|EJT42041.1| SUB1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 309
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSLP 149
D+I NKR V +++F+ + IREY+ G++ P KGI+LT + + K
Sbjct: 39 DAIFDLGKNKR-VTVRQFRNINLIDIREYYLDSSTGEMKPGKKGISLTEDLYDELLKHRL 97
Query: 150 AIDEAVVKMQSK 161
IDEA+ ++ SK
Sbjct: 98 NIDEALRRLGSK 109
>gi|50878429|gb|AAT85203.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2772
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTD-PCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
+F G +++ W +I L L +K +V T P ++ Q +E T +
Sbjct: 12 KFTGVHFKRWQIKITLWLIAMKCFWVSTGKPMGVLNADQQKEFDEATTLFVG-------- 63
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
C IL+ L D L Y T AKELW+ L + + ++++ +++M D
Sbjct: 64 --C---ILSVLGDRLVEVYMHITD-AKELWDALNTKFGATDASNDLYIMEQFHDYKMADN 117
Query: 310 KSVFEQALELNKIA 323
+SV E A E+ +A
Sbjct: 118 RSVVEHAHEIQTMA 131
>gi|270016848|gb|EFA13294.1| hypothetical protein TcasGA2_TC010227 [Tribolium castaneum]
Length = 308
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 107/269 (39%), Gaps = 22/269 (8%)
Query: 175 ANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE 234
NS S +EL N +NY W Q++ +L + L D V + P+ +
Sbjct: 3 GNSSVSRIELL-------NKENYDTWKIQMQAVL----IKCDLWDYTNGVKVKPEPGEDN 51
Query: 235 VTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTK 294
E W+ +N + ++ +S Q K +++E+W +L+ Y + K
Sbjct: 52 QNVADINE--WIKNNQKAKSEMILSISSTELRQI-KNCVTSREMWCKLEECYQSKGPPRK 108
Query: 295 RSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF- 353
+ +K I +M D V D +V + I + ++L LP ++ +F
Sbjct: 109 ATLLKNLILCKMSDGDDVRSHLNNFFASVDKLVEMNVDINPDLLAILMLYSLPPNFDNFR 168
Query: 354 CIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPR--MREMSKKRR 411
C R T L I E ++R N +E S + A G R ++++ +
Sbjct: 169 CAIESRDNLPTPEALRIKIIEESDARKGNSRENSSGAM---IANKSGQREYKKKLTCNKV 225
Query: 412 ESEMDSKT--VVCYNCRKKGHVAKHCHNK 438
+ SKT + C+ C K GH C NK
Sbjct: 226 YNGKHSKTTEIRCFKCNKIGHRVADCRNK 254
>gi|327274859|ref|XP_003222193.1| PREDICTED: hypothetical protein LOC100566687 [Anolis carolinensis]
Length = 2523
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 104/249 (41%), Gaps = 29/249 (11%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVT--RVKAAERKWLNDN 249
N N+ W ++ +LL+ +V C I CP+++ E ++ +VK A+ ++L +
Sbjct: 998 LNRHNFHYWHDKVLILLEYERVL-----DC-IERTCPESNEEAISDWKVKDAKARYLITS 1051
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
++ ++ Y + +AK++ + LK + +K+ ++ ++ D+
Sbjct: 1052 SLKTKQMM----------YVRDCVTAKDMLDALKRTFGHISKLAAIGLLKRLMKTELNDK 1101
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFH-VSVILSKLPLSWKDFCIKLMRMEYLTFTML 368
K + ++ D + +G I E+FH V +++ L + F + +TF +
Sbjct: 1102 KECDKHLENFTEMLDKLKMSGFNI-EDFHKVGLLIGSLGNIFDPFLSSIESNPDITFNL- 1159
Query: 369 MDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRR--ESEMDSKTVVCYNCR 426
A R + S V+ SP N M R S K C+NC
Sbjct: 1160 -----AVARFRDFCNDQHRSSHVD-SPKANESSYMTSSRHPHRGGASRDSPKGSTCFNCG 1213
Query: 427 KKGHVAKHC 435
K GH+A+ C
Sbjct: 1214 KFGHIARFC 1222
>gi|409050880|gb|EKM60356.1| hypothetical protein PHACADRAFT_83796, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 352
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 108/298 (36%), Gaps = 46/298 (15%)
Query: 174 VANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSE 233
VA+++ PT + +G NYR W Q++ +LT PI++ E
Sbjct: 4 VADTIHKAFGSVPT--LKADGTNYRTWIQRVNFAALGCACKALLT-AAPILS----DKEE 56
Query: 234 EVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGT 293
E + AA I L D ++ S + + +K + +
Sbjct: 57 EANALLAA--------------IAGKLPDSIFMNISGTAKVPNNIIDAMKTHFGQTTAVS 102
Query: 294 KRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
+ S K+ +EK + E L + + I AG+ I + +++ +P S+
Sbjct: 103 EASAQKRLFSLHCDNEKKMQEHLDHLLTLKEEIAEAGITIEDKTFTDAVIASVPASYMSI 162
Query: 354 ------------CIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVN--- 398
+ T L+ ++AE +SR Q +P + E++ A++
Sbjct: 163 VQAYESSIHVYNATNPATKRVVKSTELLPLLRAEAQSRMSIAQSKPKE--EVAAAIDSRG 220
Query: 399 --------FGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEINDNC 448
G + + R+ + C+ C KGH A C +K+ ++ D+
Sbjct: 221 RRGKGRGRGGAKTGSGAGSRQGQVTTDANITCFKCLGKGHRANVCPSKQQVKKTGDSA 278
>gi|157876790|ref|XP_001686737.1| putative poly-zinc finger protein 2 [Leishmania major strain
Friedlin]
gi|68129812|emb|CAJ09118.1| putative poly-zinc finger protein 2 [Leishmania major strain
Friedlin]
Length = 135
Score = 40.0 bits (92), Expect = 2.3, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 400 GPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHN 437
G R RE E+ S+TV+CYNC +KGH+A C N
Sbjct: 56 GHRARECP----EAPPKSETVICYNCSQKGHIASECTN 89
>gi|449533494|ref|XP_004173709.1| PREDICTED: uncharacterized protein LOC101230992, partial [Cucumis
sativus]
Length = 120
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV 238
+S ++L +E + NG NY W + +L + +VL + CP T AS+ T
Sbjct: 3 SSIVQLLASE--KLNGDNYAAWKSNLNTILVVDDLRFVLIEECPQNT----ASNANRTSR 56
Query: 239 KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
A +R W+ N R +IL +SD L ++ + ++ KE+ + L+ ++ E+ V
Sbjct: 57 DAYDR-WIKANEKARVYILASMSDVLVKKH-ESLATTKEIMDSLRGMFGQPEWSLSHEAV 114
Query: 299 KKYI 302
KYI
Sbjct: 115 -KYI 117
>gi|323303572|gb|EGA57363.1| Sub1p [Saccharomyces cerevisiae FostersB]
Length = 288
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSLP 149
D+I NKR V +++F+ + IREY+ G++ P KGI+LT + + K
Sbjct: 38 DAIFDLGKNKR-VTVRQFRNINLIDIREYYLDSSTGEMKPGKKGISLTEDLYDELLKHRL 96
Query: 150 AIDEAVVKMQSK 161
IDEA+ ++ SK
Sbjct: 97 NIDEALRRLGSK 108
>gi|168029051|ref|XP_001767040.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681782|gb|EDQ68206.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 380
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 4 VNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLSTT 63
V++ I + + EVLKN+D+ T +R + LG+DL+D K FIR V+++L
Sbjct: 28 VSDAEIVRHLTEVLKNADLNTTTTTAIRQQLQIALGVDLTD--KKAFIRQQVDAYLQKQW 85
Query: 64 ESTDNRIEPDL 74
+ + EP++
Sbjct: 86 QEAEAVAEPEV 96
>gi|365759066|gb|EHN00879.1| Sub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 309
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSLP 149
D+I NKR V +++F+ + IREY+ G++ P KGI+LT + + K
Sbjct: 39 DAIFDLGKNKR-VTVRQFRNINLIDIREYYLDSSTGEMKPGKKGISLTEDLYDELLKHRL 97
Query: 150 AIDEAVVKMQSK 161
IDEA+ ++ SK
Sbjct: 98 NIDEALRRLGSK 109
>gi|330923730|ref|XP_003300350.1| hypothetical protein PTT_11583 [Pyrenophora teres f. teres 0-1]
gi|311325545|gb|EFQ91554.1| hypothetical protein PTT_11583 [Pyrenophora teres f. teres 0-1]
Length = 228
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 416 DSKTVVCYNCRKKGHVAKHCHNK 438
+ K + CYNC KKGH+A+ CH+K
Sbjct: 22 NKKEITCYNCDKKGHMARDCHSK 44
>gi|401624392|gb|EJS42452.1| sub1p [Saccharomyces arboricola H-6]
Length = 294
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSLP 149
D+I NKR V +++F+ + IREY+ G++ P KGI+LT + + K
Sbjct: 39 DAIFDLGKNKR-VTVRQFRNINLIDIREYYLDSSTGEMKPGKKGISLTEDLYDELLKHRL 97
Query: 150 AIDEAVVKMQSK 161
IDEA+ ++ SK
Sbjct: 98 NIDEALRRLGSK 109
>gi|270011296|gb|EFA07744.1| hypothetical protein TcasGA2_TC002224 [Tribolium castaneum]
Length = 2378
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 105/272 (38%), Gaps = 28/272 (10%)
Query: 175 ANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE 234
NS S +E+ N +NY W Q++ +L + L D V + P+ +
Sbjct: 3 GNSSVSRIEVL-------NKENYDTWKIQMQAVL----IKCDLWDYTNGVKVKPEPGEDN 51
Query: 235 VTRVKAAERKWL-NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGT 293
E W+ ND IL+ S L + K +++E+W +L+ Y +
Sbjct: 52 QNVADINE--WIKNDQKAKSEMILSISSTEL--RQIKNCVTSREMWCKLEECYQSKGPAR 107
Query: 294 KRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
K + +K I +M D V D +V + I + ++L LP ++ +F
Sbjct: 108 KATLLKILILCKMSDSDDVRSHLNNFFASVDKLVEMNVDINPDLLAILMLYSLPPNFDNF 167
Query: 354 -CIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRE 412
C R T L I E ++R N +E S + RE KK
Sbjct: 168 RCAIESRDNLPTPEALRIKIIEESDARKGNSRENSS-----GAMIANKSGQREYKKKLTC 222
Query: 413 SEM----DSKT--VVCYNCRKKGHVAKHCHNK 438
+++ SKT + C+ C K GH C NK
Sbjct: 223 NKLYNGKHSKTTEIRCFKCNKIGHRVADCRNK 254
>gi|349580325|dbj|GAA25485.1| K7_Sub1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 291
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSLP 149
D+I NKR V +++F+ + IREY+ G++ P KGI+LT + + K
Sbjct: 38 DAIFDLGKNKR-VTVRQFRNINLIDIREYYLDSSTGEMKPGKKGISLTEDLYDELLKHRL 96
Query: 150 AIDEAVVKMQSK 161
IDEA+ ++ SK
Sbjct: 97 NIDEALRRLGSK 108
>gi|6323682|ref|NP_013753.1| Sub1p [Saccharomyces cerevisiae S288c]
gi|1711571|sp|P54000.1|SUB1_YEAST RecName: Full=RNA polymerase II transcriptional coactivator SUB1
gi|695719|emb|CAA88405.1| unknown [Saccharomyces cerevisiae]
gi|151946200|gb|EDN64431.1| transcriptional coactivator [Saccharomyces cerevisiae YJM789]
gi|190408276|gb|EDV11541.1| RNA polymerase II transcriptional coactivator SUB1 [Saccharomyces
cerevisiae RM11-1a]
gi|256273454|gb|EEU08388.1| Sub1p [Saccharomyces cerevisiae JAY291]
gi|259148617|emb|CAY81862.1| Sub1p [Saccharomyces cerevisiae EC1118]
gi|285814043|tpg|DAA09938.1| TPA: Sub1p [Saccharomyces cerevisiae S288c]
gi|323332024|gb|EGA73435.1| Sub1p [Saccharomyces cerevisiae AWRI796]
gi|323336253|gb|EGA77524.1| Sub1p [Saccharomyces cerevisiae Vin13]
gi|323347141|gb|EGA81416.1| Sub1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323353033|gb|EGA85333.1| Sub1p [Saccharomyces cerevisiae VL3]
gi|365763770|gb|EHN05296.1| Sub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392297201|gb|EIW08301.1| Sub1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 292
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSLP 149
D+I NKR V +++F+ + IREY+ G++ P KGI+LT + + K
Sbjct: 38 DAIFDLGKNKR-VTVRQFRNINLIDIREYYLDSSTGEMKPGKKGISLTEDLYDELLKHRL 96
Query: 150 AIDEAVVKMQSK 161
IDEA+ ++ SK
Sbjct: 97 NIDEALRRLGSK 108
>gi|281206070|gb|EFA80259.1| hypothetical protein PPL_07085 [Polysphondylium pallidum PN500]
Length = 225
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 98 LSNKRTVAIQEFKGRAFVSIREYFRR--DGKLVPTAKGIALTSEQWRAFSKSLPAIDEAV 155
L NK+ V+I + G ++IR Y+ +G +PT +GI L+ EQ+ + I+E
Sbjct: 136 LGNKKKVSISTYTGEPRLNIRSYYESVDNGTEIPTKRGITLSREQFNIILNNADKINEWF 195
Query: 156 VKMQSKL 162
K +S++
Sbjct: 196 DKHESEI 202
>gi|147864012|emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera]
Length = 1236
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 105/276 (38%), Gaps = 47/276 (17%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +F+G ++ W QIE L K+ P++ P++ +KA E L+
Sbjct: 11 IEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPES-------MKAEEWALLDR 57
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ + LS + + K ++ +L + L +Y K + K +M +
Sbjct: 58 QVLGVIRLT--LSRSVAHNVVKEKTTX-DLMKALSGMYEKPSANNKVHLMTKLFNLKMAE 114
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM-------- 360
SV + E N I + + + + + ++L+ LP SW+ MRM
Sbjct: 115 NASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWE-----AMRMAVSNSTGK 169
Query: 361 EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMD---- 416
E L + + D I AEE R + S A+N R R ++ + +
Sbjct: 170 EKLKYNDIRDLILAEEIRRRDAGETSGS-----GSALNLETRGRGNNRNSNQGRSNSRNS 224
Query: 417 ---------SKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C + + E
Sbjct: 225 NRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|147819404|emb|CAN75595.1| hypothetical protein VITISV_023655 [Vitis vinifera]
Length = 338
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 380 SHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKR 439
+H K + ++ ++L + F P S + ++ K + C+ C++ GH+A +C NK
Sbjct: 4 AHKKLYDTNRSMKLGSSHPFNPPTGFKSSSSQVDDLKGKGIKCFKCQQSGHMAYNCPNKN 63
Query: 440 LH 441
LH
Sbjct: 64 LH 65
>gi|449516262|ref|XP_004165166.1| PREDICTED: uncharacterized protein LOC101225243 [Cucumis sativus]
Length = 158
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Query: 187 TELHRFNGK-NYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKW 245
E+ +F+GK ++ +W +I+ LL Q K L DP + T+ EE+ +
Sbjct: 6 VEIKKFDGKGDFALWKAKIKALLGQQKAHKALLDPLELPTILTATQKEEIKLIAYGTL-- 63
Query: 246 LNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQ 305
ILN +SD++ Q + +A ++W++L+ +Y ++ K +K ++
Sbjct: 64 ----------ILN-ISDNIIRQVLEE-ETAHKVWKKLESLYATKDLPNKICLREKIFTYK 111
Query: 306 MFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
M K++ E E KI + + + + V+L+ LP
Sbjct: 112 MDSSKTLTENLDEFKKIVSNFKSLEDKLDDENEAFVLLNFLP 153
>gi|147809677|emb|CAN60145.1| hypothetical protein VITISV_019412 [Vitis vinifera]
Length = 1227
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 104/276 (37%), Gaps = 47/276 (17%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +F+G ++ W QIE L K+ P++ P++ +KA E L+
Sbjct: 11 IEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPES-------MKAEEWALLDR 57
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ + LS + + K + +L + L +Y K +KK +M +
Sbjct: 58 QVLGVIRLT--LSRSVAHNIVKE-KTIXDLMKALSGMYEKPSANNKVHLMKKLFNLKMAE 114
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM-------- 360
SV + E N I + + + + ++L+ LP SW+ MRM
Sbjct: 115 NASVAQHLNEFNTITNQLSYVEIDFDDEIRALIVLASLPNSWET-----MRMAVSNSTGK 169
Query: 361 EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMD---- 416
E L + + D I AEE R + S A+N R R ++ + +
Sbjct: 170 EKLKYNDIRDLILAEEIRRRDAGETSGS-----GSALNLETRGRGNNRNSNQGRSNSRNS 224
Query: 417 ---------SKTVVCYNCRKKGHVAKHCHNKRLHQE 443
+ V C+NC K GH + C + + E
Sbjct: 225 NRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNE 260
>gi|38346946|emb|CAE04807.2| OSJNBb0022P19.2 [Oryza sativa Japonica Group]
Length = 1099
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 96/239 (40%), Gaps = 52/239 (21%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE + +A++ + R +++ L+D++ Y K++W+ L
Sbjct: 133 PPLSPEEEAKFEASD-------CLFRGALISVLADNIVDLY-MHMPFGKDMWDAL----- 179
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
+ +FG + + EQA E+ +A + + + F V I++KLP
Sbjct: 180 EAKFGVSDAGI---------------EQAHEIQMLAKELENNNCELPDKFVVGGIIAKLP 224
Query: 348 LSWKDFCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVN-FGPRMRE 405
SW DF L + + + + L+ + EE++R+ + + K VE + N +
Sbjct: 225 PSWSDFATSLKHKRQEFSVSDLIGSLGVEEKARAKDVR---GKKVEGGSSANKVQKKNPH 281
Query: 406 MSKKRRESEMDSKTVV-------------------CYNCRKKGHVAKHCHNKRLHQEIN 445
S ++ + D K V C+ C K GH AK C ++ + N
Sbjct: 282 ASHNNKKVKPDVKPDVKPNAATNFKKKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 340
>gi|443697805|gb|ELT98103.1| hypothetical protein CAPTEDRAFT_207765 [Capitella teleta]
Length = 243
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/138 (18%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLT------ 364
S+ + ++ K A ++ G +I ++ ++++L LP ++ F + + + + +T
Sbjct: 86 SITDYVIKTEKTAAALRDTGEVISDSLLIAIVLKGLPTDYRPFSVAVSQRDLITEGEMTF 145
Query: 365 --FTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVC 422
F ++ + EE+ + ++ + + + ++ P+ + + K+ R + VC
Sbjct: 146 TEFKAMLRINSSYEETEAGRERSDSAMYNNVNKWKGSKPKSQGIKKEYRPD----RVPVC 201
Query: 423 YNCRKKGHVAKHCHNKRL 440
+NC+ HV+K +RL
Sbjct: 202 WNCKNPRHVSKTAKFQRL 219
>gi|147765318|emb|CAN66950.1| hypothetical protein VITISV_020097 [Vitis vinifera]
Length = 1199
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 102/270 (37%), Gaps = 47/270 (17%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+ + +F+G ++ W QIE L K+ P++ P++ +KA E L
Sbjct: 9 SGIEKFDGIDFAYWRMQIEDYLYGRKLH------LPLLGTKPKS-------MKAKEWALL 55
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+ + ++ + ++ +L + L +Y K +KK +M
Sbjct: 56 DRQVLG---VIRLTQSRSVAHNVVKENTTTDLMKALSGMYKKSSANNKVHLMKKLFNLKM 112
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM------ 360
+ SV + E N I + + + + ++L+ LP SW + MRM
Sbjct: 113 AENASVAQHLNEFNTITNQLSXVEIDFDDEIRALIVLASLPNSW-----EAMRMAVSNST 167
Query: 361 --EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMR--------EMSKKR 410
E L + + D I AEE + + S F A+N R R SK R
Sbjct: 168 GKEKLKYNDIRDLILAEEIHLRNAGETSGSGF-----ALNLETRSRGNDRNSNQGRSKSR 222
Query: 411 RESEMDSKT-----VVCYNCRKKGHVAKHC 435
+ SK+ V C+NC K H + C
Sbjct: 223 NSNRNRSKSRSGXQVQCWNCGKTYHFKRQC 252
>gi|77554492|gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 904
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 274 SAKELWEELKLVYLD-EEFGTKRSQVKK--YIEFQMFDEKSVFEQALELNKIADSIVAAG 330
+AKE+WE LK +L E R Q K + M D +S+ E A +++ +A+ + G
Sbjct: 508 TAKEVWESLKTRFLGVERVKKARVQTLKSDFKALHMKDTESIDEFAGKISGLANKLSDLG 567
Query: 331 MMIYENFHVSVILSKLPLSWKDFCIKLMR---MEYLTFTMLMDHIKAEEESRSHNKQEEP 387
+ + ++ V +L +P + + + ++ + F + +KA EE R + ++
Sbjct: 568 VTMDDDEQVKKLLDSVPDKFLHVIAAIEQFSDLDSMPFDEAIGRLKAYEE-RIRKRDDKN 626
Query: 388 SKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
+ + + G R R R SKT+ CY C++ GH A C
Sbjct: 627 GEHLLFTSGDTSGGRSRVKKPDR------SKTM-CYYCQELGHFAYEC 667
>gi|57834112|emb|CAE04255.4| OSJNBa0089N06.16 [Oryza sativa Japonica Group]
Length = 1196
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 104/266 (39%), Gaps = 21/266 (7%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE------------- 234
++ G NY W ++++L +V +VLT PCPI E
Sbjct: 19 DIPTLKGDNYAEWKRKLDLAFILGEVDWVLTTPCPIEPADLVRGENESDADWQKRQRDNA 78
Query: 235 --VTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG 292
V ++KW N C + N + + + + E E +K +
Sbjct: 79 PLVMSYDIEQKKWSLANKKCLAVVKNTIEPTILGSIPE-CDAVSEYLERIKSQFTGSS-K 136
Query: 293 TKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKD 352
T +Q+ K + + ++ V + L ++ +A + + I ++F V ++++ LP + +
Sbjct: 137 TYATQLIKQLVTERYNGGGVRDHILRMSNMASKLKPMDLGITDDFLVHLVMASLPKQFDN 196
Query: 353 FCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGP--RMREMSKK 409
F + + E F L+ + EEE R +V+ + P + ++
Sbjct: 197 FIVNYNISPEKWNFEKLIANCVQEEE-RIKESNGGSINYVKDKKKNHKSPTSKGKQSQHL 255
Query: 410 RRESEMDSKTVVCYNCRKKGHVAKHC 435
++ + + C +C+K GH K C
Sbjct: 256 PQQQQFAVEKDQCLHCKKTGHYKKDC 281
>gi|147776812|emb|CAN74671.1| hypothetical protein VITISV_000271 [Vitis vinifera]
Length = 234
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 169 EQNKDVANSMTSPLELFPTELH----RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIV 224
E+ ++ +SM S + LH + NGKNYR WAQ I+L++ + LTD
Sbjct: 2 ERVSEIQSSMGSVGAFENSSLHLTVEKLNGKNYREWAQAIKLIIDEKGKLGFLTD----- 56
Query: 225 TLCPQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKL 284
+ T V AA +KW +N+ ++N + + Y +AK +W+ ++
Sbjct: 57 ----ETRQPPPTDV-AASQKWQFENSFTTSCLINSMKPSIGKTYMFFL-TAKNVWDAIRE 110
Query: 285 VYLDEEFGTKRSQV--KKYIEFQMFDEKSVFEQALELNKIADSI 326
+EE+ R V KK +E + VFE LN+ D I
Sbjct: 111 T-CEEEWEGMRDNVCFKKKME-----NERVFEFLTVLNRELDDI 148
>gi|147844168|emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera]
Length = 1636
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 185 FPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERK 244
P H+ NG+NY W+Q I + ++ + +T + P+ ++ + +K
Sbjct: 37 LPITAHKLNGQNYLQWSQSILMFIRGKEKDDYITG----ASAAPETTA-------STYKK 85
Query: 245 WLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEE 290
W+ +NN+ ++N ++ + + +AKE+W+ K + D+E
Sbjct: 86 WIAENNMVMSWLVNSMTADIGENFLS-FDTAKEIWDTAKETFSDKE 130
>gi|242079169|ref|XP_002444353.1| hypothetical protein SORBIDRAFT_07g020560 [Sorghum bicolor]
gi|241940703|gb|EES13848.1| hypothetical protein SORBIDRAFT_07g020560 [Sorghum bicolor]
Length = 233
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 16/152 (10%)
Query: 196 NYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHH 255
Y W + + L L VA VL + P QA++++ R D+ +CR H
Sbjct: 14 GYLRWKESVLLRTHTLGVARVLFEDRPTGDAAAQAAAKKWAR----------DDAVCRGH 63
Query: 256 ILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQ 315
IL LSD L ++R ++A +LW L Y T R K+ F+ F+E++
Sbjct: 64 ILATLSDRLLPD-NQRFATAADLWRALARTY---HVDTPRVWRDKFDAFE-FEERAAAGV 118
Query: 316 ALELNKIADSIVAAGMMIYENFHVSVILSKLP 347
LE A+++ A + + F + +LP
Sbjct: 119 LLEQIAHAEALGVAARLP-DGFVAYELCGRLP 149
>gi|147777318|emb|CAN71573.1| hypothetical protein VITISV_030365 [Vitis vinifera]
Length = 280
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 185 FPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERK 244
P H+ NG+NY W+Q I + ++ + +T + P+ ++ + +K
Sbjct: 28 LPITAHKLNGQNYLQWSQSILMFIRGKEKDDYITG----ASAAPETTT-------STYKK 76
Query: 245 WLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEE 290
W+ +NN+ ++N ++ + + +AKE+W+ K + D+E
Sbjct: 77 WIAENNMVMSWLVNSMTADIGENFLS-FDTAKEIWDTAKDTFSDKE 121
>gi|8777297|dbj|BAA96887.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1140
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 121/285 (42%), Gaps = 37/285 (12%)
Query: 188 ELHRFNG-KNYRVWAQQIELLLKQLKVAYVLTD--PCPIVTLCPQ-----ASSEEVTRVK 239
E+ F+G N+ +W +I L L + LTD TL AS +E +
Sbjct: 8 EIKAFDGDNNFSLWKIRIMAQLGVLGLKGTLTDFALTKTETLTKSEEKQVASGDESSDSS 67
Query: 240 AAERKWLND------NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGT 293
A K + D + + I+N +SD + + + +A LWE L +Y++
Sbjct: 68 AVLTKEVPDPIKIEKSEQAMNIIINHISDTVLRKVN-HCKTAATLWELLNELYMETLLPN 126
Query: 294 KRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
+ K+ F+M K++ + + +I + + + + E +IL+ LP+++
Sbjct: 127 RIYAQLKFYSFRMMTSKTIDQNVDDFLRIVAELGSLDIKVAEEVQAILILNSLPVTYDQL 186
Query: 354 CIKLMRMEYLTFTMLMDHIKAEEES--RSHNKQEEPSKFVE--LSPAVNFGPRMR----- 404
L +Y T+ + + + +S R + +E +K V L A P+ R
Sbjct: 187 KHTL---KYGNKTLSVKDVVSSSKSLEREMAELKENTKVVNTTLYTAERGRPQTRNQNGS 243
Query: 405 ---------EMSKKRRESEMDSKT-VVCYNCRKKGHVAKHCHNKR 439
++ + +S +SK+ V C+ C+K+GHV K C ++
Sbjct: 244 QGNNQGNNQGKNQGKGKSRSNSKSRVTCWFCKKEGHVKKDCFARK 288
>gi|331248932|ref|XP_003337087.1| hypothetical protein PGTG_18846 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309316077|gb|EFP92668.1| hypothetical protein PGTG_18846 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 576
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 102/277 (36%), Gaps = 29/277 (10%)
Query: 166 SSGEQNKDVANSMTSPLELFPTELHRFNGK--NYRVWAQQIELLLKQLKVAYVLTDPCPI 223
SS Q+ DVA+ T L++ E + G NY W+ +++ V YV+ D
Sbjct: 202 SSTTQDSDVASHPT--LKITGVEQLKPPGSESNYLDWSWILDIHFTATDVDYVIHD---- 255
Query: 224 VTLCPQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELK 283
E+ A+ W DN I + + A+ LW+ LK
Sbjct: 256 -------KPEDA----KAKPNWARDNKAVCGVISRTIHPTNIRNVRHLKNDARGLWDALK 304
Query: 284 LVYLDEEFGTKRSQVKKYIEFQMFD---EKSVFEQALELNKIADSIVAAGMMIYENFHVS 340
+ D G ++K +M + + + A +++ + + + + + S
Sbjct: 305 RAHQDSSAGGVTYWLRKLTSSRMINNDLSAHLEDMAKTFERLSSLVTSEAPLTPNDIYSS 364
Query: 341 VILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFG 400
IL+ LP W +M + ++D +KAEE R ++P VE +
Sbjct: 365 SILTSLPTDWLACVSSMMNEPRVDPDRVIDALKAEELRRKTRLSDQP--IVE-----SVS 417
Query: 401 PRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHN 437
+ K + ++ D T C C GH C N
Sbjct: 418 QASNKKPSKSKSAKQDQPTRHCTFCNLDGHDLNRCFN 454
>gi|147771338|emb|CAN65095.1| hypothetical protein VITISV_011639 [Vitis vinifera]
Length = 1377
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 185 FPTELHRFNGKNYRVWAQQIELLLK-QLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAER 243
P H+ NG+NY W+Q I + ++ + K Y++ +S + +
Sbjct: 28 LPITTHKLNGQNYLQWSQSILMFIRGKEKDDYII------------GASAAPKTTTSTYK 75
Query: 244 KWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEE 290
KW+ +NN+ ++N ++ + + +AKE+W+ K + D+E
Sbjct: 76 KWIAENNMVMSWLVNSMTTDIGENFLS-FDTAKEIWDIAKETFSDKE 121
>gi|359484000|ref|XP_003633051.1| PREDICTED: uncharacterized protein LOC100854333 [Vitis vinifera]
Length = 1689
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 104/269 (38%), Gaps = 43/269 (15%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEV------TRVKAAERK 244
+F G NY WA Q EL LK K + D + S++V + A
Sbjct: 9 KFTGTNYSTWAFQFELFLKG-KDLWGHIDGTDVEKPSTFEKSQDVGFSPSWAVLDARIMS 67
Query: 245 WLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEF 304
WL + HI+ L H SA+ +W LK VY ++ +R Q++ I
Sbjct: 68 WLLGS--VEPHIVTHLRPH---------RSAQSMWAYLKKVY-HQDNDARRFQLEHAIA- 114
Query: 305 QMFDEKSV-----FEQALEL-NKIADSIVA----AGMMIYENFHVSV----ILSKLPLSW 350
MF S+ + L L ++ AD + A A + + H + L KL L +
Sbjct: 115 -MFQHGSLSIQDYYSAFLTLWHEYADLVTADVPIAALSTIQTIHATTRRDQFLMKLRLEY 173
Query: 351 KDFCIKLM-RMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKK 409
+ L+ R + + + EE+ S E S + G + + +
Sbjct: 174 ESVRSSLLNRSPVPSLDICFGELLREEQRLSTQAILEQSH-------GSSGTAIVAYAAQ 226
Query: 410 RRESEMDSKTVVCYNCRKKGHVAKHCHNK 438
R M SK + C+ C++ GH+A C K
Sbjct: 227 GRGPPMHSKNLQCFCCKEYGHIAATCPKK 255
>gi|147784778|emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 79/201 (39%), Gaps = 28/201 (13%)
Query: 243 RKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI 302
R W++DN LN +S+ + + W +L+ +Y + K +KK +
Sbjct: 40 RXWVDDNX------LNHVSEEKH---------XRSXWNKLEQLYARKTXNNKLFLIKKMM 84
Query: 303 EFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL----- 357
+ D + I + + + E +L LP SW+ F L
Sbjct: 85 SLKYQDGTXXTDHLNTFQGIINQLAGMNIKFEEEVQGLWLLGTLPDSWETFRTSLSNSAP 144
Query: 358 ---MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESE 414
M M+ + +L + ++ +S+ + Q + + + GP+ R+ SK +
Sbjct: 145 DGIMNMDLVKSCVLNEEMR--RKSQGSSSQSNVLVIXKXGRSKSRGPKNRDRSKSKTNKF 202
Query: 415 MDSKTVVCYNCRKKGHVAKHC 435
+ V C+ C KGH+ K+C
Sbjct: 203 AN---VECHYCHLKGHIKKYC 220
>gi|147846217|emb|CAN79491.1| hypothetical protein VITISV_033372 [Vitis vinifera]
Length = 293
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 191 RFNGKNYRVWAQQIELLLK-QLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDN 249
R NG N+ +W+Q + + + + K++ C ++E + AA W +N
Sbjct: 37 RLNGNNFLLWSQAVCMYTRGRGKIS------------CLTGDTKEPMKTDAAYATWDAEN 84
Query: 250 NICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
++ +LN + + + Y S+AKELW+ + +Y D FG K SQV
Sbjct: 85 SMIMDWLLNVMEEDISANYMCY-STAKELWDNINQMYSD--FGNK-SQV 129
>gi|13124684|sp|P04146.3|COPIA_DROME RecName: Full=Copia protein; AltName: Full=Gag-int-pol protein;
Contains: RecName: Full=Copia VLP protein; Contains:
RecName: Full=Copia protease
gi|1491679|emb|CAA26444.1| 31 KD polyprotein [Drosophila melanogaster]
gi|19309876|emb|CAA28054.2| hypothetical protein [Drosophila melanogaster]
gi|41058041|gb|AAR99086.1| SD14423p [Drosophila melanogaster]
Length = 1409
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 117/260 (45%), Gaps = 30/260 (11%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
F+G+ Y +W +I LL + V V+ P +E K AER
Sbjct: 11 FDGEKYAIWKFRIRALLAEQDVLKVVDGLMP---------NEVDDSWKKAER-------C 54
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKS 311
+ I+ +LSD + ++ +A+++ E L VY + ++ + K+ + ++ E S
Sbjct: 55 AKSTIIEYLSDS-FLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMS 113
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTMLM 369
+ +++ ++AAG I E +S +L LP + I+ + E LT +
Sbjct: 114 LLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVK 173
Query: 370 DHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRM-------REMSKKRRESEMDSK-TVV 421
+ + ++E + N + SK V ++ V+ ++K ++ + +SK V
Sbjct: 174 NRL-LDQEIKIKNDHNDTSKKV-MNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKVK 231
Query: 422 CYNCRKKGHVAKHC-HNKRL 440
C++C ++GH+ K C H KR+
Sbjct: 232 CHHCGREGHIKKDCFHYKRI 251
>gi|449526533|ref|XP_004170268.1| PREDICTED: uncharacterized protein LOC101227530 [Cucumis sativus]
Length = 124
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRV 238
+S ++L +E + NG NY W + +L + +VLT+ CP AS+ T
Sbjct: 3 SSIVQLLASE--KLNGNNYVTWKSNLNTILVVDDLRFVLTEECP----QNPASNANRTGR 56
Query: 239 KAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQV 298
KA +R W+ N R +I +SD L ++ + ++ KE+ + LK ++ ++ + V
Sbjct: 57 KAFDR-WVKANEKARVYIFASVSDVLAKKH-ESLATTKEIMDSLKEMFEQSKWSLRHETV 114
Query: 299 KKYI 302
KYI
Sbjct: 115 -KYI 117
>gi|222428374|gb|ACM50029.1| truncated gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 418 KTVVCYNCRKKGHVAKHCHNKR 439
KTV C+NC K+GH+AKHC R
Sbjct: 387 KTVKCFNCGKEGHIAKHCRAPR 408
>gi|108862291|gb|ABA96637.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 817
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 56/222 (25%)
Query: 228 PQASSEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYL 287
P S EE + +A++ + R +++ L+D++ Y T S K++W+ L
Sbjct: 63 PPFSPEEEVKFEASDF-------LFRGALISVLADNIVDVY-MHTPSGKDMWDAL----- 109
Query: 288 DEEFGTKRSQVKKYIEFQMFDEKSVFEQALELN--KIADSIVAAGMMIYENFHVSVILSK 345
+ +FG + +++ E QM + LE N ++ D VA G I++K
Sbjct: 110 EAKFGVSDAGMEQAHEIQML------AKELENNNCELPDKFVAGG-----------IIAK 152
Query: 346 LPLSWKDFCIKL--MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRM 403
LP SW DF L R E+ + SHN ++ + NF
Sbjct: 153 LPPSWSDFATSLKHKRQEF----------SKKNPHASHNNKKVKPDVKPKA-TTNF---- 197
Query: 404 REMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEIN 445
++ C+ C K GH AK C ++ + N
Sbjct: 198 -------KKKGKGKAKGDCFVCGKSGHWAKDCPERKDRKSAN 232
>gi|356566709|ref|XP_003551572.1| PREDICTED: uncharacterized protein LOC100804842 [Glycine max]
Length = 651
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 245 WLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIE 303
W ++ +C + ILN L+D LY YS SAK +W L+ Y EE GTK+ V +Y++
Sbjct: 317 WNENDYLCNNFILNGLADDLY-DYSP-YKSAKLVWLALEEKYDTEEAGTKKYVVSRYLK 373
>gi|224534|prf||1107279B ORF g
Length = 1410
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 117/260 (45%), Gaps = 30/260 (11%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
F+G+ Y +W +I LL + V V+ P +E K AER
Sbjct: 12 FDGEKYAIWKFRIRALLAEQDVLKVVDGLMP---------NEVDDSWKKAER-------C 55
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKS 311
+ I+ +LSD + ++ +A+++ E L VY + ++ + K+ + ++ E S
Sbjct: 56 AKSTIIEYLSDS-FLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMS 114
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTMLM 369
+ +++ ++AAG I E +S +L LP + I+ + E LT +
Sbjct: 115 LLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVK 174
Query: 370 DHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRM-------REMSKKRRESEMDSK-TVV 421
+ + ++E + N + SK V ++ V+ ++K ++ + +SK V
Sbjct: 175 NRL-LDQEIKIKNDHNDTSKKV-MNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKVK 232
Query: 422 CYNCRKKGHVAKHC-HNKRL 440
C++C ++GH+ K C H KR+
Sbjct: 233 CHHCGREGHIKKDCFHYKRI 252
>gi|156001136|gb|ABU42061.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 418 KTVVCYNCRKKGHVAKHCHNKR 439
KTV C+NC K+GH+AKHC R
Sbjct: 388 KTVKCFNCGKEGHIAKHCRAPR 409
>gi|147768962|emb|CAN73624.1| hypothetical protein VITISV_042460 [Vitis vinifera]
Length = 1287
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 185 FPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERK 244
P H+ NG+NY W+Q I + ++ + +T ++ E T + +K
Sbjct: 37 LPITTHKLNGQNYLQWSQSILMFIRGKEKDDYITG---------AXAAPETT--XSTYKK 85
Query: 245 WLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEE 290
W+ +NN+ ++N ++ + + +AKE+W+ K + D+E
Sbjct: 86 WIAENNMVMSWLVNSMTADIGENFLS-FDTAKEIWDTAKETFSDKE 130
>gi|338746563|dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 39.3 bits (90), Expect = 3.7, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQAS--SEEVT 236
TS L + + + + NY +W++Q+ L ++A L T P A+ ++
Sbjct: 13 TSILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGS----TTMPPATIGTDAAP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + +L +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIE 303
R+Q+K++ +
Sbjct: 128 LRTQLKQWTK 137
>gi|344232500|gb|EGV64379.1| ssDNA-binding transcriptional regulator [Candida tenuis ATCC 10573]
gi|344232501|gb|EGV64380.1| hypothetical protein CANTEDRAFT_114169 [Candida tenuis ATCC 10573]
Length = 106
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSLPAID 152
+ L N + V ++ FK V IRE++ + + P KGI+LT E W+ S I
Sbjct: 16 VIPLDNYKQVTVRRFKTMNLVDIREFYVDKVTKEKKPGKKGISLTEEMWKKLMASQHQIQ 75
Query: 153 EAVVKMQS 160
EA+ ++ S
Sbjct: 76 EALDQLNS 83
>gi|115460738|ref|NP_001053969.1| Os04g0629600 [Oryza sativa Japonica Group]
gi|113565540|dbj|BAF15883.1| Os04g0629600 [Oryza sativa Japonica Group]
gi|215697934|dbj|BAG92101.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 323
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 104/266 (39%), Gaps = 21/266 (7%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE------------- 234
++ G NY W ++++L +V +VLT PCPI E
Sbjct: 41 DIPTLKGDNYAEWKRKLDLAFILGEVDWVLTTPCPIEPADLVRGENESDADWQKRQRDNA 100
Query: 235 --VTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG 292
V ++KW N C + N + + + + E E +K +
Sbjct: 101 PLVMSYDIEQKKWSLANKKCLAVVKNTIEPTILGSIPE-CDAVSEYLERIKSQFTGSS-K 158
Query: 293 TKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKD 352
T +Q+ K + + ++ V + L ++ +A + + I ++F V ++++ LP + +
Sbjct: 159 TYATQLIKQLVTERYNGGGVRDHILRMSNMASKLKPMDLGITDDFLVHLVMASLPKQFDN 218
Query: 353 FCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGP--RMREMSKK 409
F + + E F L+ + EEE R +V+ + P + ++
Sbjct: 219 FIVNYNISPEKWNFEKLIANCVQEEE-RIKESNGGSINYVKDKKKNHKSPTSKGKQSQHL 277
Query: 410 RRESEMDSKTVVCYNCRKKGHVAKHC 435
++ + + C +C+K GH K C
Sbjct: 278 PQQQQFAVEKDQCLHCKKTGHYKKDC 303
>gi|353244569|emb|CCA75934.1| hypothetical protein PIIN_09930, partial [Piriformospora indica DSM
11827]
Length = 575
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 47/269 (17%), Positives = 96/269 (35%), Gaps = 38/269 (14%)
Query: 186 PTELHRFNGKNYRVWAQQIE--LLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAER 243
PT + + NY W+++++ L L + DP P T A +
Sbjct: 7 PTSIPVLSKDNYPAWSRKMKAYFFLHNLYELVLDEDPKPTET--------------ADQP 52
Query: 244 KWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIE 303
KW+ I + + + E+W++L ++ ++ GT+ + +
Sbjct: 53 KWIRRQRQAAAAITMSIDKTNAIHIDDISDNPVEMWKKLASIHNNKSAGTRFNAMDSLFG 112
Query: 304 FQMFDEKSVFEQALELNKIADSIVAAGMMIY------ENFHVSVILSKLPLSWKDFCIKL 357
D K + E +N + + M Y + +L LP ++ L
Sbjct: 113 VTKEDSKDLAELMTRINGLLQRVKQLRPMGYTITDLDNELAIMAMLRALPDDYRHLRSSL 172
Query: 358 MRMEYLTFTMLMDHIKAEEESRSHNKQEE--------PSKFVELSPAVNFGPRMREMSKK 409
+ +T ++ + +AE+ R H +Q + P+++ P+ +F P+ +
Sbjct: 173 LCQTNITREVIEEAFRAEDNHRRHEQQSQATALRVTTPNQYRTNGPSHHFRPKPSTTGR- 231
Query: 410 RRESEMDSKTVVCYNCRKKGHVAKHCHNK 438
+ +C C KK H C K
Sbjct: 232 -------TPGALCTFCGKKNHTEAQCFAK 253
>gi|108708249|gb|ABF96044.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1395
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 104/270 (38%), Gaps = 29/270 (10%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE------------- 234
++ G NY W ++++L +V +VLT PCPI E
Sbjct: 19 DIPTLKGDNYAEWKRKLDLAFILGEVDWVLTTPCPIEPADLVRGENESDADWQKRQRDNA 78
Query: 235 --VTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG 292
V ++KW N C + N + + + + E E +K +
Sbjct: 79 PLVMSYDIEQKKWSLANKKCLAVVKNTIEPTILGSIPE-CDAVSEYLERIKSQFTGSS-K 136
Query: 293 TKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKD 352
T +Q+ K + + ++ V + L ++ +A + + I ++F V ++++ LP + +
Sbjct: 137 TYATQLIKQLVTERYNGGGVRDHILRMSNMASKLKPMDLGITDDFLVHLVMASLPKQFDN 196
Query: 353 FCIKL-MRMEYLTFTMLMDHIKAEEE------SRSHNKQEEPSKFVELSPAVNFGPRMRE 405
F + + E F L+ + EEE S N ++ K + SP
Sbjct: 197 FIVNYNISPEKWNFEKLIANCVQEEERIKESNGGSINYVKDKKKNHK-SPTSKGKQSQHL 255
Query: 406 MSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
+++ E D C +C+K GH K C
Sbjct: 256 PQQQQFAVEKDQ----CLHCKKTGHYKKDC 281
>gi|147810097|emb|CAN71459.1| hypothetical protein VITISV_022140 [Vitis vinifera]
Length = 1085
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 399 FGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEIND 446
F R+ + ++K+ E+ +D K ++C+ C K GH K C R+ Q+IN+
Sbjct: 470 FQRRVNKDTQKKVETPLDVKPIICFKCGKVGHYKKDC---RVKQKINN 514
>gi|224152499|ref|XP_002337246.1| predicted protein [Populus trichocarpa]
gi|222838548|gb|EEE76913.1| predicted protein [Populus trichocarpa]
Length = 289
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 11/201 (5%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
FNG NY+ WA ++E L+ L + + + I L + +V K ERK +
Sbjct: 15 FNGDNYQFWAVRMETYLEALDLWEAVEEDYEIPALPNNPTMAQVKSQK--ERK--TKKSK 70
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEF--GTKRSQVKKYIEFQ-MFD 308
+ + ++ ++ + +AKE+WE LK Y +E G + + + E Q M
Sbjct: 71 AKACLFAAVASTIFTRIMS-LKTAKEIWEFLKTEYEGDERIQGMQVLNLMRDFELQKMKK 129
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMR---MEYLTF 365
+S+ E + L IA I G + E+ V IL +P ++ L M +T
Sbjct: 130 TESIKEYSDRLLNIASRISLLGSSLPESRIVQKILVTIPEIFEATITSLENTKDMSKITL 189
Query: 366 TMLMDHIKAEEESRSHNKQEE 386
T +++ ++A+E+ R +++E
Sbjct: 190 TEMLNALQAQEQRRIMRQEDE 210
>gi|22711571|gb|AAM74314.2|AC114474_6 Putative retroelement [Oryza sativa Japonica Group]
gi|78708436|gb|ABB47411.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1223
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 357 LMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMD 416
LM MEY F L+D KA + +N+ E+ + A +F + + E
Sbjct: 276 LMAMEYRDFQQLVD--KAIRQEDKYNRMEQKKRR-----AAHFKAQQAPTQNQPVRKEQG 328
Query: 417 SKTVVCYNCRKKGHVAKHCHNKR 439
SK VC+NC GH A C R
Sbjct: 329 SKPGVCFNCGHPGHYADKCPKAR 351
>gi|13540823|gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 16/176 (9%)
Query: 274 SAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALE-LNKIADSIVAAGMM 332
SA +W +L+ +Y+ + T + +KK + DE + F L LN + + G+
Sbjct: 81 SACGIWTKLENLYMSKTL-TNKLYLKKQLYTLHMDEGTNFLSHLNVLNGLITQLANLGVK 139
Query: 333 IYENFHVSVILSKLPLSWKDFCIKLM------RMEYLTFTMLMDHIKAEEESRSHNK--- 383
I E V+L+ LP S+ ++ +++ +T +L++ K ++ +H +
Sbjct: 140 IEEEDKRIVLLNSLPSSYDTLSTTILHGKDSIQLKDVTSALLLNE-KMRKKPENHGQVFI 198
Query: 384 QEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKR 439
E + + S + N+G R ++ + + SK CYNC + GH + C N +
Sbjct: 199 TESRGRSYQRSSS-NYG---RSGARGKSKVRSKSKARNCYNCDQPGHFKRDCPNPK 250
>gi|147791706|emb|CAN64015.1| hypothetical protein VITISV_031523 [Vitis vinifera]
Length = 272
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 19/176 (10%)
Query: 286 YLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSK 345
Y+ E+ GT++ + + FQM ++ V Q + + + + + + E F V ++
Sbjct: 5 YILEDAGTQKYVIGNFRNFQMTGDRDVSSQIHNYHLLINDLAIKDIKLPEPFVVGYLVET 64
Query: 346 LPLSWKDFCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNF----- 399
L SWKD+ + + + ++ ++ HI+ EE++R+ + E+ ELS N
Sbjct: 65 LLESWKDYKNNMKHKKKQMSLEDVIIHIRIEEQNRNKDNIEKAK---ELSSKANVVEEKS 121
Query: 400 GPR-MREMSKKRRESEMDSKTVVCYNCRKKG---------HVAKHCHNKRLHQEIN 445
P+ R + R S V +K+G H A CH+++ ++ N
Sbjct: 122 KPKNNRSRKQNSRTKSNASNKVQNSTIKKRGNFCVYGKSRHCAVQCHHRKKTEKTN 177
>gi|147819437|emb|CAN64502.1| hypothetical protein VITISV_020342 [Vitis vinifera]
Length = 660
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 192 FNGKNYRVWAQQIELLLK-QLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
F GKNY VW++ + + L + K+A C +L ++E V WL NN
Sbjct: 47 FTGKNYIVWSRSMSIALTVKNKIA------CVDGSLVQPITNEPYLCV-----AWLRANN 95
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
+ ++N ++ +Y T +A ++WEELK+ YL + G + ++K + + K
Sbjct: 96 LVLSWLMNSIAKEIYGSLLYFT-NAFDIWEELKIRYLRND-GPRVFSLEKSLSSISQNSK 153
Query: 311 SVFEQALELNKIADSIVA 328
SV E E + D ++
Sbjct: 154 SVTEYFSEFKALWDEYIS 171
>gi|147779335|emb|CAN65573.1| hypothetical protein VITISV_001031 [Vitis vinifera]
Length = 1121
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 399 FGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEIND 446
F R+ + ++K+ E+ +D K ++C+ C K GH K C R+ Q+IN+
Sbjct: 788 FQRRVNKDTQKKVETPLDVKPIICFKCGKVGHYKKDC---RVKQKINN 832
>gi|367011068|ref|XP_003680035.1| hypothetical protein TDEL_0B06950 [Torulaspora delbrueckii]
gi|359747693|emb|CCE90824.1| hypothetical protein TDEL_0B06950 [Torulaspora delbrueckii]
Length = 222
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 91 GDSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSL 148
D++ NKR V +++F+ + IREY+ G++ P KGI+LT + + K
Sbjct: 33 ADAVFDLGKNKR-VTVRQFRNVNLIDIREYYMDTSTGEMKPGKKGISLTEDLYDELLKHR 91
Query: 149 PAIDEAVVKMQSK 161
IDEA+ + SK
Sbjct: 92 LNIDEALRRFGSK 104
>gi|19881694|gb|AAM01095.1|AC092748_33 Putative retroelement [Oryza sativa Japonica Group]
Length = 1240
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 357 LMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMD 416
LM MEY F L+D KA + +N+ E+ + A +F + + E
Sbjct: 276 LMAMEYRDFQQLVD--KAIRQEDKYNRMEQKKRR-----AAHFKAQQAPTQNQPVRKEQG 328
Query: 417 SKTVVCYNCRKKGHVAKHCHNKR 439
SK VC+NC GH A C R
Sbjct: 329 SKPGVCFNCGHPGHYADKCPKAR 351
>gi|147780419|emb|CAN67992.1| hypothetical protein VITISV_015686 [Vitis vinifera]
Length = 1308
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 99/263 (37%), Gaps = 42/263 (15%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
+F NY WA Q EL LK K + D V SS + A WL +
Sbjct: 9 KFTSTNYSTWAFQFELFLKG-KDLWGHIDGTNNV-----GSSPSWAVLDARIMSWLIGS- 61
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
HI+ L H SA+ +W LK VY ++ +R Q++ I MF
Sbjct: 62 -VEPHIVTHLRPH---------RSAQSMWAYLKKVY-HQDNDARRFQLEHAIA--MFQHG 108
Query: 311 SV-----FEQALEL-----NKIADSIVAAGMMIYENFHVSV----ILSKLPLSWKDFCIK 356
S+ + L L + + + A + + HV+ L KL ++
Sbjct: 109 SLSIQDYYSAFLTLWHEYADLVTTDVPIAALSTIQTIHVTTRRDQFLMKLCPEYESVRSS 168
Query: 357 LM-RMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEM 415
L+ R + + + EE+ S E S + V + + + RE M
Sbjct: 169 LLNRSPVPSLDICFGELLREEQRLSTQAILEQSHGSSGTTTVAY-------AAQGREPPM 221
Query: 416 DSKTVVCYNCRKKGHVAKHCHNK 438
SK + C+ C++ GH+A C K
Sbjct: 222 HSKNLQCFCCKEYGHIAATCPKK 244
>gi|147809583|emb|CAN66651.1| hypothetical protein VITISV_043264 [Vitis vinifera]
Length = 1283
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 402 RMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEIND 446
R+ + ++K+ E+ +D K ++C+ C K GH K C R+ Q+IN+
Sbjct: 702 RVNKDTQKKEETPLDVKPIICFKCGKVGHYKKDC---RVKQKINN 743
>gi|365983152|ref|XP_003668409.1| hypothetical protein NDAI_0B01320 [Naumovozyma dairenensis CBS 421]
gi|343767176|emb|CCD23166.1| hypothetical protein NDAI_0B01320 [Naumovozyma dairenensis CBS 421]
Length = 299
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 92 DSIICKLSNKRTVAIQEFKGRAFVSIREYF--RRDGKLVPTAKGIALTSEQWRAFSKSLP 149
D+I NKR V +++F+ + IREY+ G++ P KGI+LT + + K
Sbjct: 39 DAIFDLGKNKR-VTVRQFRNINLIDIREYYLDSSSGEMKPGKKGISLTEDLYDELLKHRL 97
Query: 150 AIDEAVVKMQSK 161
IDEA+ + SK
Sbjct: 98 NIDEALRRFGSK 109
>gi|338746565|dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
Length = 1048
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 63/130 (48%), Gaps = 10/130 (7%)
Query: 179 TSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQAS--SEEVT 236
TS L + + + + NY +W++Q+ L ++A L T P A+ ++
Sbjct: 13 TSILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDG----STTMPPATIGTDAAP 68
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG---T 293
RV +W + + + +L +S + S+ T++A ++WE L+ +Y + +G
Sbjct: 69 RVNPDYTRWKRQDKLIYNAVLGAISMSVQPAVSRATTAA-QIWETLRKIYANPSYGHVTQ 127
Query: 294 KRSQVKKYIE 303
R+Q+K++ +
Sbjct: 128 LRTQLKQWTK 137
>gi|154345724|ref|XP_001568799.1| putative poly-zinc finger protein 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066141|emb|CAM43931.1| putative poly-zinc finger protein 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 135
Score = 38.9 bits (89), Expect = 4.8, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 400 GPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHN 437
G R RE E+ S+TV+CYNC +KGH+A C N
Sbjct: 56 GHRARECP----EAPPKSETVMCYNCSQKGHIASECTN 89
>gi|331222525|ref|XP_003323936.1| hypothetical protein PGTG_05838 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309302926|gb|EFP79517.1| hypothetical protein PGTG_05838 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 288
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 37/261 (14%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
+ +NY +W IE L +LK ++T CP + ++ K + + N
Sbjct: 13 LSNENYTLWLLPIEAKLYKLKALNIVTG----AVTCPDSETD-----KDNFKLYNKLNED 63
Query: 252 CRHHILNFLSDH-LYYQYSKRTSSAK----ELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
I+ +L+ L Y S ++ K +LW+ LK + + +K S +KK++
Sbjct: 64 AYAEIVQYLNQEVLAYVSSALPTTDKFNGYKLWQLLKSKFAGNDLTSKTSALKKFLAVD- 122
Query: 307 FDEKSVFEQALELNKIADS-IVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLT 364
+D S F L L + + IV + + + + ++L KLP + F + M E L
Sbjct: 123 YDSFSSF---LPLIRATNQKIVLSCLTLDDQVKTILMLDKLPQDFHSFKTNISMNFETLP 179
Query: 365 FTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYN 424
F D +K E+ + N+ + K V S A F + ++ D ++C +
Sbjct: 180 FD---DVLKKLEDFATQNQLNDTKKSVIASEATMFT----------KTTDPD---IICPH 223
Query: 425 CRKKGHVAKHCHNKRLHQEIN 445
C++ HC K H E N
Sbjct: 224 CKRGFRSCSHCF-KSGHTESN 243
>gi|357513573|ref|XP_003627075.1| Receptor-like protein kinase [Medicago truncatula]
gi|355521097|gb|AET01551.1| Receptor-like protein kinase [Medicago truncatula]
Length = 1215
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 188 ELHRFNGKN-YRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
++ +F G N + +W +++ +L Q K L + QA E+
Sbjct: 6 DIEKFIGINDFGLWKVKMQEVLIQQKCEKALKGEGALPVTMTQAEKTEIV---------- 55
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+ R I+ L D + +K + A +W +L+ +Y+ + ++ ++ F+M
Sbjct: 56 ---DKARSVIVMCLGDKVLRDVAKEPTVA-SMWSKLETLYMTKSLAHRQFLKQQLYSFKM 111
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
+ K+V EQ E NKI D + + + + ++L LP S++ F
Sbjct: 112 VESKTVMEQLTEFNKILDDLENIEVQLEDEDKTILLLCALPRSFESF 158
>gi|13793973|gb|AAK12626.1| unknown protein [Aedes aegypti]
Length = 1298
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 96/253 (37%), Gaps = 41/253 (16%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ + NG N+ W ++E LL + + V+ + P +E R + W
Sbjct: 8 IPKLNGTNWATWKLRVENLLARDDLWDVVVEEVP----------DEFDR----DDDWEIA 53
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
N + ++ L D ++ +A +++ LK + + S +KK + +
Sbjct: 54 NRKAKATLVLLLEDS-QLAIVRKCVNAHDVFGALKAYHEKSTRSVRVSLLKKLCAINLSE 112
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTM- 367
+ + E++ + D + AAG + + + ++L LP S+ L T+
Sbjct: 113 RGDLEQHLFEVDDLFDRLDAAGTTLDADTKICLLLRSLPPSFDGLVTALDSRSQDDITLE 172
Query: 368 -----LMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVC 422
LMD E H ++E + M+ K E T VC
Sbjct: 173 VVKSKLMDEFLRRLERDGHPVKKEKA--------------MKTAVTKTGE------TRVC 212
Query: 423 YNCRKKGHVAKHC 435
+ C+K GH+ ++C
Sbjct: 213 FYCKKPGHLQRNC 225
>gi|218187530|gb|EEC69957.1| hypothetical protein OsI_00415 [Oryza sativa Indica Group]
Length = 463
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
+ NG+NY+ W +LL+ + A LTD P + T++KA W ++
Sbjct: 145 KLNGQNYQEWELSARMLLRSIGQASHLTDD-------PPDEKTDATKIKA----WKTADD 193
Query: 251 ICRHHILNFLSDHLYYQYSKRT-SSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDE 309
I F+S + + S R S+AKE+W+ LK Y E + S +K Q D+
Sbjct: 194 RVMGFI--FMSVEVPIRMSFRDHSTAKEMWDYLKQRYTQESGALRFSLLKNLHNLQQQDQ 251
>gi|147769537|emb|CAN70223.1| hypothetical protein VITISV_035155 [Vitis vinifera]
Length = 984
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 402 RMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEIND 446
R+ ++K+ E+ +D K ++C+ C K GH K+C R+ Q+IN+
Sbjct: 805 RVNRDTQKKLETPLDIKPIICFKCGKVGHYKKNC---RVKQKINN 846
>gi|147834984|emb|CAN74609.1| hypothetical protein VITISV_029328 [Vitis vinifera]
Length = 969
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 17/173 (9%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLN 247
++ G NY+VW ++I L L + + Y + P T+ +++ E KA +W
Sbjct: 210 DIPELKGDNYKVWKERILLHLGCMDIDYAIRKDKP--TIIDTSTTAE----KALYEQWER 263
Query: 248 DNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGT-----KRSQVKKYI 302
N + L F+ + Y + LK++ DE+F T + V K+
Sbjct: 264 SNRLS----LMFIKTKISYGIRGFVDQHDNVKALLKVI--DEQFVTLDKALANTLVMKFS 317
Query: 303 EFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCI 355
++ D V E +++ IA + + + ++F V IL+ P + F I
Sbjct: 318 SLRLTDVSGVREHIMQVRNIAAQLKTLEVEMSDSFLVHFILNTFPQQYGPFKI 370
>gi|255586842|ref|XP_002534032.1| conserved hypothetical protein [Ricinus communis]
gi|223525957|gb|EEF28352.1| conserved hypothetical protein [Ricinus communis]
Length = 93
Score = 38.9 bits (89), Expect = 5.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 184 LFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAER 243
L ++L F+G N+ W ++ LL +L VAY+L+ P + P+ ++E KA +
Sbjct: 27 LMHSKLDCFDGTNFTCWKDKLLFLLTELGVAYLLSGNLPAI---PEPINDESKETKAFGK 83
Query: 244 KWLNDNNICR 253
K +D CR
Sbjct: 84 KREDDEIRCR 93
>gi|33285932|gb|AAQ01581.1| agCP7521-like protein [Aedes albopictus]
Length = 602
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 104/263 (39%), Gaps = 39/263 (14%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +F G+ Y VW +++ L+ V A ++ V A K+
Sbjct: 13 IQQFAGRGYDVWQFRVQTYLESANVW--------------DAIVKDAPAVAAEAAKFHEM 58
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ + ++ F++D Y + +AK +W+ L+ + + G + K+ + D
Sbjct: 59 DRKAKAILVGFVADE-YLGCIRDKGTAKAMWKSLEDTFAKKSAGRQTLIRKQIARLHLKD 117
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM--EYLTFT 366
SV L+ + + AG + E+ S + LP S+ L + LT+
Sbjct: 118 GASVRAHLLQFEDLIRQLRMAGSKLEESDVCSSLALTLPESYDALVTALENLPENELTYE 177
Query: 367 MLMDHIKAEEESR---SHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCY 423
++ + EE R S+ ++P+ FV ++ + + K C+
Sbjct: 178 VMKTRLIDEESKRNERSYTVGDKPAAFVG--------------ENQKNGNRFNGK---CH 220
Query: 424 NCRKKGHVAKHCHNKRLHQEIND 446
C K+GH+ K C K+ + +N+
Sbjct: 221 ACGKRGHMKKDC--KKAKRNVNE 241
>gi|242794481|ref|XP_002482383.1| retrotransposon polyprotein, putative [Talaromyces stipitatus ATCC
10500]
gi|218718971|gb|EED18391.1| retrotransposon polyprotein, putative [Talaromyces stipitatus ATCC
10500]
Length = 1697
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 399 FGPRMREM-------SKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEI 444
+GP E+ + ++++ D TV CYNC K GH AK C + R ++I
Sbjct: 252 YGPMPMELDATVEAKTYEKKKVRFDKTTVKCYNCNKTGHYAKECRSPRKERQI 304
>gi|331234805|ref|XP_003330061.1| hypothetical protein PGTG_10971 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309309051|gb|EFP85642.1| hypothetical protein PGTG_10971 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 288
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 37/261 (14%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
+ +NY +W IE L +LK ++T CP + ++ K + + N
Sbjct: 13 LSNENYTLWLLPIEAKLYKLKALNIVTG----AVTCPDSETD-----KDNFKLYNKLNED 63
Query: 252 CRHHILNFLSDH-LYYQYSKRTSSAK----ELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
I+ +L+ L Y S ++ K +LW+ LK + + +K S +KK++
Sbjct: 64 AYAEIVQYLNQEVLAYVSSALPTTDKFNGYKLWQLLKSKFAGNDLTSKTSALKKFLAVD- 122
Query: 307 FDEKSVFEQALELNKIADS-IVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLT 364
+D S F L L + A+ IV + + + + ++L KLP + F + M E L
Sbjct: 123 YDSFSSF---LPLIRAANQKIVLSCLALDDQVKTILMLDKLPQDFHSFKTNISMNFETLP 179
Query: 365 FTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYN 424
F D +K ++ + N+ + K V S A F + ++ D ++C +
Sbjct: 180 FD---DVLKKLKDFATQNQLNDTKKSVIASEATMFT----------KTTDPD---IICPH 223
Query: 425 CRKKGHVAKHCHNKRLHQEIN 445
C++ HC K H E N
Sbjct: 224 CKRGFRSCSHCF-KSGHTESN 243
>gi|147860361|emb|CAN82574.1| hypothetical protein VITISV_034720 [Vitis vinifera]
Length = 1172
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 104/274 (37%), Gaps = 47/274 (17%)
Query: 187 TELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
+ + +F+G ++ W QIE L K+ P++ P++ +KA E L
Sbjct: 9 SGIEKFDGTDFAYWRMQIEDYLYGRKLH------LPLLGTKPES-------MKAEEWALL 55
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
+ + + LS + + K ++ +L + L +Y K +KK +M
Sbjct: 56 DRQVLGVIRLT--LSRSVAHNVVKEKTTT-DLMKALSGMYEKPSANNKVHLMKKLFNLKM 112
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM------ 360
+ SV + E N I + + + + + ++L+ LP SW + MRM
Sbjct: 113 AENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSW-----EAMRMAVSNST 167
Query: 361 --EYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRES----- 413
E L + + D I AEE R + S A+N R ++ +
Sbjct: 168 GKEKLKYNDIRDLILAEEIRRRDAGETSGS-----GSALNLETRGXGNNRNSNQGRSNXR 222
Query: 414 --------EMDSKTVVCYNCRKKGHVAKHCHNKR 439
+ V C+NC K GH + C + +
Sbjct: 223 NSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPK 256
>gi|108864678|gb|ABG22585.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 1416
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 13/138 (9%)
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWK----DFCIKLMRMEYLTFT 366
S+ L++ KI I G + + + L K + K DFC + F
Sbjct: 497 SINYHYLDIGKITQKIQLVGAELCNDLKIKDQLKKQRILGKREMGDFCYQF------GFQ 550
Query: 367 MLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCR 426
H K + S+ K + SK A P+ R +K R + +SK +CY C
Sbjct: 551 DPYVHRKRKTHSKPMTKSNDKSKMS--FQATKRKPK-RIYNKNIRTKDTESKETICYKCG 607
Query: 427 KKGHVAKHCHNKRLHQEI 444
KGH+A C ++ +EI
Sbjct: 608 LKGHIANRCFKSKVKKEI 625
>gi|403369594|gb|EJY84646.1| hypothetical protein OXYTRI_17507 [Oxytricha trifallax]
Length = 407
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 90 DGDSIICKLSNKRTV--AIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKS 147
+ + ++ +LS + V I KG + R Y + K P +G+ALT EQWR F K
Sbjct: 325 ENNDVVYELSANKMVKMGIWAQKGIFMIHFRGYQKDQSKHFPEKEGLALTGEQWRKFCKF 384
Query: 148 LPAIDEAVVKMQSKLRSESSG 168
I+ V + L S G
Sbjct: 385 YEQINADVQCIYDGLAVPSRG 405
>gi|297726571|ref|NP_001175649.1| Os08g0506200 [Oryza sativa Japonica Group]
gi|255678562|dbj|BAH94377.1| Os08g0506200 [Oryza sativa Japonica Group]
Length = 876
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 13/138 (9%)
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWK----DFCIKLMRMEYLTFT 366
S+ L++ KI I G + + + L K + K DFC + F
Sbjct: 352 SINYHYLDIGKITQKIQLVGAELCNDLKIKDQLKKQRILGKREMGDFCYQF------GFQ 405
Query: 367 MLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCR 426
H K + S+ K + SK A P+ R +K R + +SK +CY C
Sbjct: 406 DPYVHRKRKTHSKPMTKPNDKSKMS--FQATKRKPK-RIYNKNIRTQDTESKETICYKCG 462
Query: 427 KKGHVAKHCHNKRLHQEI 444
KGH+A C ++ +EI
Sbjct: 463 LKGHIANRCFKSKVKKEI 480
>gi|42408922|dbj|BAD10179.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1275
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 13/138 (9%)
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWK----DFCIKLMRMEYLTFT 366
S+ L++ KI I G + + + L K + K DFC + F
Sbjct: 699 SINYHYLDIGKITQKIQLVGAELCNDLKIKDQLKKQRILGKREMGDFCYQF------GFQ 752
Query: 367 MLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCR 426
H K + S+ K + SK A P+ R +K R + +SK +CY C
Sbjct: 753 DPYVHRKRKTHSKPMTKPNDKSKMS--FQATKRKPK-RIYNKNIRTQDTESKETICYKCG 809
Query: 427 KKGHVAKHCHNKRLHQEI 444
KGH+A C ++ +EI
Sbjct: 810 LKGHIANRCFKSKVKKEI 827
>gi|108864684|gb|ABG22591.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 1359
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 13/138 (9%)
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWK----DFCIKLMRMEYLTFT 366
S+ L++ KI I G + + + L K + K DFC + F
Sbjct: 497 SINYHYLDIGKITQKIQLVGAELCNDLKIKDQLKKQRILGKREMGDFCYQF------GFQ 550
Query: 367 MLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCR 426
H K + S+ K + SK A P+ R +K R + +SK +CY C
Sbjct: 551 DPYVHRKRKTHSKPMTKSNDKSKMS--FQATKRKPK-RIYNKNIRTKDTESKETICYKCG 607
Query: 427 KKGHVAKHCHNKRLHQEI 444
KGH+A C ++ +EI
Sbjct: 608 LKGHIANRCFKSKVKKEI 625
>gi|284434732|gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 49/265 (18%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 191 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 250
+ NG N+ W++ + ++L+Q K +VL +P P V + +K+A +K +++
Sbjct: 106 KLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDV-----PADNAAATLKSAYKKACDESL 160
Query: 251 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYI-EFQMFDE 309
+L ++ L Q+ A ++ LK ++ + + TKR ++ K + ++ +
Sbjct: 161 DVSCLMLAAMNSDLQKQF--ENIEAYDMIVALKGMF-ETQARTKRFEISKNLFSCKLAEG 217
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIK------------- 356
V +++ S+ G + + +IL+ LP S+ F +
Sbjct: 218 SPVSPHMIKMVGYTQSLEKLGFPLSQELATDLILASLPASYGQFILNFHMNGLDKNLTEL 277
Query: 357 --LMRMEYLTFTMLMDHIKAEEESRSHNKQEEP---SKFVELSPAVNFG-PRMREMSKKR 410
L++ + + H+ ++S S K+ K ++ + P+++ S
Sbjct: 278 HMLLKTAEDSIKKINSHVMMVQKSTSFKKKARTWVKGKGKKVLDGIQTNKPKLKTKSGPT 337
Query: 411 RESEMDSKTVVCYNCRKKGHVAKHC 435
+E+E C+ C++ GH ++C
Sbjct: 338 QENE-------CFYCKEPGHWKRNC 355
>gi|224080235|ref|XP_002306065.1| predicted protein [Populus trichocarpa]
gi|222849029|gb|EEE86576.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 17/109 (15%)
Query: 328 AAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYL-TFTMLMDHIKAEEESRSHNKQEE 386
AG + + V ++ LP +W+ + L + + TF + HIK EE+ R H ++
Sbjct: 17 GAGHEMTDEQQVQGVICYLPSNWEHVRVNLTHNDNIKTFDDVARHIKLEED-RLHAEKPI 75
Query: 387 PSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
F+ S++ + KT +C+NC K GH A++C
Sbjct: 76 NEAFI---------------SQQEPSARAIKKTRICFNCGKPGHFARNC 109
>gi|147777988|emb|CAN67571.1| hypothetical protein VITISV_036869 [Vitis vinifera]
Length = 3072
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 402 RMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKRLHQEIND 446
R+ + ++K+ E+ +D K ++C+ C K GH K C R+ Q+IN+
Sbjct: 829 RVNKDTQKKVETSLDVKPIICFKCGKVGHYKKDC---RVKQKINN 870
>gi|147802450|emb|CAN61645.1| hypothetical protein VITISV_036929 [Vitis vinifera]
Length = 1014
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 102/251 (40%), Gaps = 15/251 (5%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
NG N++ W + + +LL + + L P P L Q++ E+ + KW N +
Sbjct: 21 LNGTNFKDWKENMMILLGCMDIDLALRMPKPD-ELNEQSTQED----EVYWGKWERSNRL 75
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQ--MFDE 309
+ + + + ++A + E++ + + K S ++F + +
Sbjct: 76 SLMIMKRGIPEAFRGAVTDEVTNASDFLAEIQKRFCQKTIRLKTSHAFSKLDFNEVLKGK 135
Query: 310 KSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTML 368
+V E +E++ +A + A + + ++ V ++L LP + F + + + T L
Sbjct: 136 GNVREYIMEMSHLASKLKALKLELSDDLLVHLVLISLPAQFNQFKVSYNCQKDKWTLNEL 195
Query: 369 MDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKT----VVCYN 424
+ EEE +K E S + + G R + +K + + K V C+
Sbjct: 196 ISFCVQEEERLKQDKTESAHL---ASTSKDKGKRKNKDNKVAASNGPEQKKQKVEVTCFF 252
Query: 425 CRKKGHVAKHC 435
C K GH K C
Sbjct: 253 CNKPGHTKKEC 263
>gi|331238131|ref|XP_003331721.1| hypothetical protein PGTG_12886 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309310711|gb|EFP87302.1| hypothetical protein PGTG_12886 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 289
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 101/244 (41%), Gaps = 24/244 (9%)
Query: 196 NYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQAS-SEEVTRVKAAERKWLNDNNICRH 254
NY +W +E L +LK+ IV + + + EE +K+ + +
Sbjct: 17 NYTLWLLPMEARLFKLKL-------LDIVEIQAEVTEKEEAASIKSNNDAYAEIISYVGQ 69
Query: 255 HILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFE 314
+L F+S L S R + + LW+ LK Y ++ SQ +F D S+ +
Sbjct: 70 EVLGFVSSAL--PASPRFN-GRGLWKLLKSQYAGDDL---TSQTTALDQFLHLDFSSIAK 123
Query: 315 QALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKA 374
+ I +G+++ + ++L KLP ++ F ++ M Y + + K
Sbjct: 124 FIPSVRSANQKITMSGLILDDRVRTILMLKKLPSDYRSFR-DIVSMNYGSESFESVIKKL 182
Query: 375 EEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKH 434
E ++ ++P PA + P +++ ++ +S +C +C+K GH +
Sbjct: 183 ESYVAQNDLDKKP-------PATSSTPLQSLLTRSNDQAPANS--TLCDHCKKPGHRVNN 233
Query: 435 CHNK 438
C K
Sbjct: 234 CWAK 237
>gi|357504503|ref|XP_003622540.1| hypothetical protein MTR_7g045090 [Medicago truncatula]
gi|355497555|gb|AES78758.1| hypothetical protein MTR_7g045090 [Medicago truncatula]
Length = 294
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 103/251 (41%), Gaps = 40/251 (15%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAY--VLT--DPCPIVTLCPQASSEEVTRVKA--AERKW 245
FNGKNY W ++EL L+ V ++T D P+ T + T+V+ E W
Sbjct: 19 FNGKNYYFWKGKMELFLRSQDVDMWKIITNGDHIPMTT-------DATTKVETLTPEASW 71
Query: 246 LNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQ----VKKY 301
++ + +LN ++W+ LK ++ +E K ++ V+K+
Sbjct: 72 SKEDK--KKVLLN-----------------SKVWDTLK-IHHEETSHIKETRIDIGVRKF 111
Query: 302 IEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMR-- 359
F+M +++++ E I + + + G + + IL LP +W+ + +
Sbjct: 112 EIFEMNEDENIDEMYSRFTSIVNELRSLGKTYTTHDRIRKILRCLPSTWRPMVTAITQAK 171
Query: 360 -MEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSK 418
+ L L+ +KA E +K K + ++ G + R++ + E+ K
Sbjct: 172 DLNSLALEDLIGSLKAHETLLQDDKPSRKGKMGRILDGLSLGAKERDLEQIGHENTKIGK 231
Query: 419 TVVCYNCRKKG 429
+ +K G
Sbjct: 232 QNISPTSQKPG 242
>gi|110288966|gb|AAP53325.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1884
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 101/276 (36%), Gaps = 47/276 (17%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE---------------VT 236
G NY W ++++L V +VLT PCPI E V
Sbjct: 27 LKGDNYAEWKRKLDLAFILGDVDWVLTTPCPIEPAELIRGENESDADWQKRQRDNAPLVM 86
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRS 296
++KW N C + N + + + + E E +K + T +
Sbjct: 87 SYDIEQKKWSLANKKCLAVVKNTIEPTILGSIPE-CDAVSEYLERIKSQFTGSS-KTYAT 144
Query: 297 QVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIK 356
Q+ K + + + V + L ++ +A + + I ++F V ++++ LP + +F +
Sbjct: 145 QLIKQLVTERYHGGGVRDHILRMSNMASKLKPMDLGITDDFLVHLVMASLPKQFDNFIVN 204
Query: 357 L-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEM 415
+ E F L+ + EEE + ++N+ +++ KK +S
Sbjct: 205 YNISPEKWNFEKLIANCVQEEERIKESN----------GCSINY---VKDNKKKNHKSSP 251
Query: 416 DSKTVV----------------CYNCRKKGHVAKHC 435
SK C +C+K GH K C
Sbjct: 252 TSKAKQSQHLPQQQQFAVEKDQCLHCKKTGHYKKDC 287
>gi|1109662|gb|AAC46989.1| p31A [Drosophila melanogaster]
gi|1586828|prf||2204395A transrepressor
Length = 98
Score = 38.5 bits (88), Expect = 6.6, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 67 DNRIEPDLEVEEQRAQIGKRINDDGD--SIICKLSNKRTVAIQEFKGRAFVSIREYFRRD 124
D+RI+P + ++ D G+ + L R V I EF+GR V IRE++ +
Sbjct: 18 DDRIKPASKKAKESDAPNSDPKDSGENGATSWTLEGLRQVRINEFRGRKSVDIREFYDKG 77
Query: 125 GKLVPTAKG 133
G+++P KG
Sbjct: 78 GQILPGKKG 86
>gi|4377464|emb|CAA26447.1| unnamed protein product [Drosophila melanogaster]
Length = 1288
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 113/258 (43%), Gaps = 26/258 (10%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
F+G+ Y +W +I LL + V V+ P +E K AER
Sbjct: 11 FDGEKYAIWKFRIRALLAEQDVLKVVDGLMP---------NEVDDSWKKAER-------C 54
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKS 311
+ I+ +LSD + ++ +A+++ E L VY + ++ + K+ + ++ E S
Sbjct: 55 AKSTIIEYLSDS-FLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMS 113
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF--CIKLMRMEYLTFTM-- 367
+ +++ ++AAG I E +S +L LP + I+ + E LT
Sbjct: 114 LLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVK 173
Query: 368 --LMDH-IKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSK-TVVCY 423
L+D IK + + NK+ + + ++K ++ + +SK V C+
Sbjct: 174 NRLLDQEIKIKNDHNDTNKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKVKCH 233
Query: 424 NCRKKGHVAKHC-HNKRL 440
+C ++GH+ K C H KR+
Sbjct: 234 HCGREGHIKKDCFHYKRI 251
>gi|405959271|gb|EKC25324.1| hypothetical protein CGI_10015603 [Crassostrea gigas]
Length = 188
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Query: 89 DDGDSIICKLSNKRTVAIQEFKGRAF----------VSIREYFRRDG--KLVPTAKGIAL 136
DD DS I + + VA + G + V+IR+++ G ++VPT KG A+
Sbjct: 74 DDVDSAIDQHDAEMQVAYNQHLGENYYMTIGNDYPVVNIRKWWMPPGNDEIVPTKKGAAI 133
Query: 137 TSEQWRAFSKSLPAIDEAV 155
T +QW+ + +P +++ +
Sbjct: 134 TFDQWKTLKELMPEVEKKI 152
>gi|20279458|gb|AAM18738.1|AC092548_16 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1787
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 101/276 (36%), Gaps = 47/276 (17%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE---------------VT 236
G NY W ++++L V +VLT PCPI E V
Sbjct: 27 LKGDNYAEWKRKLDLAFILGDVDWVLTTPCPIEPAELIRGENESDADWQKRQRDNAPLVM 86
Query: 237 RVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRS 296
++KW N C + N + + + + E E +K + T +
Sbjct: 87 SYDIEQKKWSLANKKCLAVVKNTIEPTILGSIPE-CDAVSEYLERIKSQFTGSS-KTYAT 144
Query: 297 QVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIK 356
Q+ K + + + V + L ++ +A + + I ++F V ++++ LP + +F +
Sbjct: 145 QLIKQLVTERYHGGGVRDHILRMSNMASKLKPMDLGITDDFLVHLVMASLPKQFDNFIVN 204
Query: 357 L-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEM 415
+ E F L+ + EEE + ++N+ +++ KK +S
Sbjct: 205 YNISPEKWNFEKLIANCVQEEERIKESN----------GCSINY---VKDNKKKNHKSSP 251
Query: 416 DSKTVV----------------CYNCRKKGHVAKHC 435
SK C +C+K GH K C
Sbjct: 252 TSKAKQSQHLPQQQQFAVEKDQCLHCKKTGHYKKDC 287
>gi|307177004|gb|EFN66308.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Camponotus floridanus]
Length = 252
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 9/175 (5%)
Query: 270 KRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSI--- 326
K +++ ++W L+ +Y + K + +K+ +M D + + LN DS+
Sbjct: 32 KNCATSHDMWVRLEEIYQSKGPARKATLLKRLTLQKMADNGDI---RIHLNDFFDSVDKL 88
Query: 327 VAAGMMIYENFHVSVILSKLPLSWKDF-CIKLMRMEYLTFTMLMDHIKAEEESRSHNKQE 385
G+ I E+ ++L LP S+++F C R E L I E ++R ++
Sbjct: 89 SDMGVDINEDLLTILLLYSLPASFENFRCAIESRDELPKPEALRVKIVEENDARKSEVRD 148
Query: 386 EPSK--FVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHCHNK 438
S FV + R+ ++S V C+ C+K GH AK+C N+
Sbjct: 149 VSSGAMFVRKNNGKQRQNRLNSNKGDGKKSGKTDDAVRCFKCKKTGHRAKNCPNR 203
>gi|99719|pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
(strain Landsberg) (fragment)
gi|16384|emb|CAA37924.1| unnamed protein product [Arabidopsis thaliana]
Length = 1084
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 7/173 (4%)
Query: 274 SAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMI 333
SA E+WE L Y++ + K+ F+M D KS+ E E KI + + + +
Sbjct: 11 SAAEMWETLNKQYMETSLPNRIYVQLKFYSFKMNDSKSINENVNEFLKIVAELSSLEINV 70
Query: 334 YENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVE 392
E + L+ L + L + L+ ++ ++ E K+ + +
Sbjct: 71 VEEVRAILFLNGLSSRYSQLKHTLKYGNKALSLQDVISSARSLERELDEQKETDKNTSTV 130
Query: 393 LSPAVNFGPRMREMSK-KRRESEMDSKT-----VVCYNCRKKGHVAKHCHNKR 439
L P+ R ++ K + SK+ + C+ C+K+GHV K C ++
Sbjct: 131 LYTNERGRPQTRNQNQNKEGQGRGISKSNSNAKLTCWYCKKEGHVKKDCFARK 183
>gi|146104184|ref|XP_001469753.1| putative poly-zinc finger protein 2 [Leishmania infantum JPCM5]
gi|398024250|ref|XP_003865286.1| poly-zinc finger protein 2, putative [Leishmania donovani]
gi|134074123|emb|CAM72865.1| putative poly-zinc finger protein 2 [Leishmania infantum JPCM5]
gi|322503523|emb|CBZ38609.1| poly-zinc finger protein 2, putative [Leishmania donovani]
Length = 135
Score = 38.5 bits (88), Expect = 7.0, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 412 ESEMDSKTVVCYNCRKKGHVAKHCHN 437
E+ S+TV+CYNC +KGH+A C N
Sbjct: 64 EAPPKSETVMCYNCSQKGHIASECTN 89
>gi|147846224|emb|CAN81648.1| hypothetical protein VITISV_030595 [Vitis vinifera]
Length = 789
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 11/162 (6%)
Query: 274 SAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMI 333
+ +L + L +Y K +KK M + SV + E N I + + + +
Sbjct: 102 TTTDLMKALSGMYEKSSANNKVYLMKKLFNLNMAENASVSQHLNEFNTITNQLSSIEIDF 161
Query: 334 YENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVEL 393
+ H ++L+ L SW+ MRM + + A+E S S + ++
Sbjct: 162 DDEIHALIVLASLSNSWE-----AMRM------VEIRRRDADETSGSGSVLNLETRNRGN 210
Query: 394 SPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
N G S + R S+ V C+NC K GH K C
Sbjct: 211 DRNSNRGRSKSRNSNRNRSKSKSSQQVQCWNCGKTGHFRKQC 252
>gi|147795320|emb|CAN67245.1| hypothetical protein VITISV_008680 [Vitis vinifera]
Length = 1333
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 185 FPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERK 244
P H+ NG+NY W+Q I + ++ + +T + P+ ++ + +K
Sbjct: 339 LPITAHKLNGQNYLQWSQSILMFIRGKEKDDYITG----ASAAPETTA-------STYKK 387
Query: 245 WLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEE 290
W+ +NN+ ++N ++ + + +AKE+W K + D+E
Sbjct: 388 WIAENNMVMSWLVNSMTADIGENFLS-FDTAKEIWNTAKETFSDKE 432
>gi|303291246|ref|XP_003064909.1| transcriptional coactivator p15 [Micromonas pusilla CCMP1545]
gi|226453580|gb|EEH50889.1| transcriptional coactivator p15 [Micromonas pusilla CCMP1545]
Length = 328
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 95 ICKLSNKRTVAIQEFKGRAFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEA 154
+C LSN R ++ +K + V + E F + G+ + KGI LT +W A ++ + +A
Sbjct: 192 VCALSNNRFCTVKTYKDESVVDLHESFEKGGEWI-RKKGIRLTRGEWAALCAAMDEVTKA 250
>gi|301088488|ref|XP_002996910.1| hypothetical protein PITG_21952 [Phytophthora infestans T30-4]
gi|262110583|gb|EEY68635.1| hypothetical protein PITG_21952 [Phytophthora infestans T30-4]
Length = 92
Score = 38.5 bits (88), Expect = 7.5, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 175 ANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE 234
AN+ T+ F T+L +F+G YRVWA+Q++L L+ V + P P + S +
Sbjct: 3 ANTTTA----FTTKLRKFDGTGYRVWARQLQLYLEVKDVWSAVLKPAPTLLQLENEESGQ 58
Query: 235 VTR-VKAAER 243
R ++ ER
Sbjct: 59 ADRPLRQQER 68
>gi|147845375|emb|CAN81238.1| hypothetical protein VITISV_031073 [Vitis vinifera]
Length = 1354
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 99/249 (39%), Gaps = 13/249 (5%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
NG N++ W + + +LL + + L P P L Q++ E+ KW N +
Sbjct: 65 LNGTNFKDWKENMMILLGCMDIDLALRMPKP-DELNEQSTQED----DVYWGKWERSNRL 119
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKS 311
+ + + + ++A + E++ + + + + I + + +
Sbjct: 120 SLMIMKRGIPEAFRGAVTDEVTNASDFLAEIQKRFAKNDKAETSTLLASLISMKYKGKGN 179
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTMLMD 370
V E +E++ +A + A + + ++ V ++L LP + F + + + T L+
Sbjct: 180 VREYIMEMSHLASKLKALKLELSDDLLVHLVLISLPAQFNQFKVSYNCQKDKWTLNELIS 239
Query: 371 HIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKT----VVCYNCR 426
EEE +K E S + + G R + +K + + K V C+ C
Sbjct: 240 FCVQEEERLKQDKTESAHL---ASTSKDKGKRKNKDNKVAASNGPEQKKQKVEVTCFFCN 296
Query: 427 KKGHVAKHC 435
K GH K C
Sbjct: 297 KPGHTKKEC 305
>gi|62701895|gb|AAX92968.1| Transposable element protein, putative [Oryza sativa Japonica
Group]
gi|62733929|gb|AAX96038.1| Transposable element protein, putative [Oryza sativa Japonica
Group]
gi|77550042|gb|ABA92839.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 560
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 404 REMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
R+ K+ + + SK+ +CYNCR KGH+ K+C
Sbjct: 387 RQTGNKQTKKQYRSKSRLCYNCRAKGHIGKNC 418
>gi|50080298|gb|AAT69633.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1358
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 103/270 (38%), Gaps = 29/270 (10%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE------------- 234
++ G NY W ++++L +V +VLT PCPI E
Sbjct: 15 DIPTLKGDNYAEWKRKLDLAFILGEVDWVLTTPCPIEPADLVRGENESDADWQKRQRDNA 74
Query: 235 --VTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG 292
V ++KW N C + N + + + + E E +K +
Sbjct: 75 PLVMSYDIEQKKWSLANKKCLAVVKNTIEPTILGSIPE-CDAVSEYLERIKSQFTGSS-K 132
Query: 293 TKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKD 352
T +Q+ K + + + V + L ++ +A + + I ++F V ++++ LP + +
Sbjct: 133 TYATQLIKQLVTERYHGGGVRDHILRMSNMASKLKPMDLGITDDFLVHLVMASLPKQFDN 192
Query: 353 FCIKL-MRMEYLTFTMLMDHIKAEEE------SRSHNKQEEPSKFVELSPAVNFGPRMRE 405
F + + E F L+ + EEE S N ++ K + SP
Sbjct: 193 FIVNYNISPEKWNFEKLIANCVQEEERIKESNGGSINYVKDKKKNHK-SPTSKGKQSQHL 251
Query: 406 MSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
+++ E D C +C+K GH K C
Sbjct: 252 PQQQQFAVEKDQ----CLHCKKTGHYKKDC 277
>gi|330795912|ref|XP_003286014.1| hypothetical protein DICPUDRAFT_76928 [Dictyostelium purpureum]
gi|325084012|gb|EGC37450.1| hypothetical protein DICPUDRAFT_76928 [Dictyostelium purpureum]
Length = 554
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 419 TVVCYNCRKKGHVAKHCHNK 438
+VVCY+C +KGH +++CHNK
Sbjct: 324 SVVCYSCGQKGHFSRNCHNK 343
>gi|147768268|emb|CAN73613.1| hypothetical protein VITISV_023299 [Vitis vinifera]
Length = 1815
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 100/249 (40%), Gaps = 13/249 (5%)
Query: 192 FNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNI 251
NG N++ W + + +LL + + L P P L Q++ E+ + KW N +
Sbjct: 65 LNGTNFKDWKENMMILLGCMDIDLALRMPKP-DELNEQSTQED----EVYWGKWERSNRL 119
Query: 252 CRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEKS 311
+ + + + ++A + E++ + + + + I + + +
Sbjct: 120 SLMIMKRGIPEAFRGAVTDEVTNASDFLAEIQKRFAKNBKAETSTLLASLISMKYKGKGN 179
Query: 312 VFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKL-MRMEYLTFTMLMD 370
V E +E++ +A + A + + ++ V ++L LP + F + + + T L+
Sbjct: 180 VREYIMEMSHLASKLKALKLELSDDLLVHLVLISLPAQFNQFKVSYNCQKDKWTLNELIS 239
Query: 371 HIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKT----VVCYNCR 426
EEE +K E S + + G R + +K + + K V C+ C
Sbjct: 240 FCVQEEERLKQDKTESAHL---ASTSKDKGKRKNKDNKVAXSNGPEQKKQKVEVTCFFCN 296
Query: 427 KKGHVAKHC 435
K GH K C
Sbjct: 297 KPGHTKKEC 305
>gi|19881713|gb|AAM01114.1|AC098682_18 Putative retroelement [Oryza sativa Japonica Group]
gi|22725941|gb|AAN04951.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431112|gb|AAP52934.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 299
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 274 SAKELWEELKLVYLDEEF---GTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAG 330
+AKE WE ++ + + E +S K++ +M + +SV + A+ L + ++I G
Sbjct: 111 TAKEAWEAVRTMRMGVERVREAKAQSLRKEFELIRMKEGESVDDFAMRLTGLVNNIHTLG 170
Query: 331 MMIYENFHVSVILSKLPLSWKDFCI---KLMRMEYLTFTMLMDHIKAEEESR--SHNKQE 385
M+ E V L +P + I +L+ ++ L+ L +K+ EE N E
Sbjct: 171 AMMEEEMVVKKFLRVVPSKYTQVAISIEQLIDLKTLSVEELTGRLKSVEERYEIDGNGSE 230
Query: 386 EPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGH 430
+ + + M M K+++ D V CY C+ GH
Sbjct: 231 AYGRLL-----LTEEQWMERMKSKKKKDTFDKAKVRCYKCQGYGH 270
>gi|147816075|emb|CAN66087.1| hypothetical protein VITISV_044185 [Vitis vinifera]
Length = 878
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 185 FPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERK 244
P H+ NG+NY W+Q I + ++ + +T +S + +K
Sbjct: 200 LPITAHKLNGQNYLQWSQSILMFIRGKEKDDYIT-----------GASAAPETTASTYKK 248
Query: 245 WLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEE 290
W+ +NN+ ++N ++ + + +AKE+W+ K + D+E
Sbjct: 249 WIAENNMVMSWLVNSMTADIGENF-LSFDTAKEIWDIAKETFSDKE 293
>gi|147792513|emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 178 MTS--PLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEV 235
MTS PL T+ ++ G NY W + +++L + +VL++ +C + E
Sbjct: 1 MTSFNPLANILTQ-NKLEGPNYVDWKRNLDILQTAEEYKFVLSE------VCLEKPGEGA 53
Query: 236 TRVKA-AERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTK 294
T+ + A +KW+ + + R +IL +S+ L +Q+ K ++ ++ E LK ++ D+ +
Sbjct: 54 TQDQIKAHQKWVKADEMARCYILASMSNVLQHQHQKMDTTY-DILENLKEMFGDQTSAVR 112
Query: 295 RSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAG 330
++ +++ + +M + V L++ + + + G
Sbjct: 113 QNALREILTSKMEEGTQVRTHVLKMMSLLNDMEVLG 148
>gi|219120301|ref|XP_002180892.1| TPR repeat-contain kinesin light chain [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217407608|gb|EEC47544.1| TPR repeat-contain kinesin light chain [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 694
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 127 LVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKLRSESSGEQNKDVANSMTS-PLELF 185
L T IAL Q R+FSKSL EA+ ++R ++ G+ N +VA+++ S L LF
Sbjct: 464 LSATLSSIALIHYQTRSFSKSLDVYQEAL-----RIRRDAYGDNNLEVASTLNSIGLVLF 518
Query: 186 PTELH 190
E H
Sbjct: 519 KMEQH 523
>gi|147794282|emb|CAN75993.1| hypothetical protein VITISV_040580 [Vitis vinifera]
Length = 630
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 29/199 (14%)
Query: 189 LHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLND 248
+ +F+G ++ W QIE L K+ P++ P++ +KA E L+
Sbjct: 11 IEKFDGTDFAYWRMQIENYLYGRKLH------LPLLGTKPES-------MKAEEWALLDR 57
Query: 249 NNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFD 308
+ + LS + + K ++ +L + L +Y K +KK +M +
Sbjct: 58 QVLGVIRLT--LSRSVAHNIVKEKTTI-DLMKALSGMYEKPSANNKVHLMKKLFNLKMAE 114
Query: 309 EKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRM-------- 360
SV + E N I + + + + + H ++L+ LP SW K+MRM
Sbjct: 115 NASVAQHLNEFNTITNQLSSVKIDFDDEIHALIVLASLPNSW-----KVMRMAVSNSTGK 169
Query: 361 EYLTFTMLMDHIKAEEESR 379
E L + + D I AEE R
Sbjct: 170 EKLKYNDIRDLILAEEIRR 188
>gi|18408061|ref|NP_564835.1| DEK, chromatin associated protein [Arabidopsis thaliana]
gi|6633810|gb|AAF19669.1|AC009519_3 F1N19.6 [Arabidopsis thaliana]
gi|21537079|gb|AAM61420.1| unknown [Arabidopsis thaliana]
gi|51969632|dbj|BAD43508.1| unknown protein [Arabidopsis thaliana]
gi|88011174|gb|ABD38913.1| At1g64490 [Arabidopsis thaliana]
gi|332196125|gb|AEE34246.1| DEK, chromatin associated protein [Arabidopsis thaliana]
Length = 124
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 16 VLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFL 59
+LK S + E+TE K R EAS L +DLS +K +R V+SF+
Sbjct: 26 ILKRSSLLEITEIKAREEASSELNLDLSRDPYKIIVREAVDSFI 69
>gi|39546250|emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]
Length = 1405
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 103/266 (38%), Gaps = 21/266 (7%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE------------- 234
++ G NY W ++++L +V +VLT PCPI E
Sbjct: 23 DIPTLKGDNYAEWKRKLDLAFILGEVDWVLTTPCPIEPADLVRGENESDADWQKRQRDNA 82
Query: 235 --VTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG 292
V ++KW N C + N + + + + E E +K +
Sbjct: 83 PLVMSYDIEQKKWSLANKKCLAVVKNTIEPTILGSIPE-CDAVSEYLERIKSQFTGSS-K 140
Query: 293 TKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKD 352
T +Q+ K + + + V + L ++ +A + + I ++F V ++++ LP + +
Sbjct: 141 TYATQLIKQLVTERYHGGGVRDHILRMSNMASKLKPMDLGITDDFLVHLVMASLPKQFDN 200
Query: 353 FCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGP--RMREMSKK 409
F + + E F L+ + EEE R +V+ + P + ++
Sbjct: 201 FIVNYNISPEKWNFEKLIANCVQEEE-RIKESNGGSINYVKDKKKNHKSPTSKGKQSQHL 259
Query: 410 RRESEMDSKTVVCYNCRKKGHVAKHC 435
++ + + C +C+K GH K C
Sbjct: 260 PQQQQFAVEKDQCLHCKKTGHYKKDC 285
>gi|38346885|emb|CAE03910.2| OSJNBb0015G09.4 [Oryza sativa Japonica Group]
Length = 1393
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 104/268 (38%), Gaps = 21/268 (7%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE------------- 234
++ G NY W ++++L +V +VLT PCPI E
Sbjct: 23 DIPTLKGDNYAEWKRKLDLAFILGEVDWVLTTPCPIEPAELVRGENESDADWQKRQRDNA 82
Query: 235 --VTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG 292
V ++KW N C + N + + + + E E +K +
Sbjct: 83 PLVMSYDIEQKKWSLANKKCLAVVKNTIEPTILGSIPE-CDAVSEYLERIKSQFTGSS-K 140
Query: 293 TKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKD 352
T +Q+ K + + + V + L ++ +A + + I ++F V ++++ LP + +
Sbjct: 141 TYATQLIKQLVTERYHGGGVRDHILRMSNMASKLKPMDLGITDDFLVHLVMASLPKQFDN 200
Query: 353 FCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGP--RMREMSKK 409
F + + E F L+ + EEE R +V+ + P + ++
Sbjct: 201 FIVNYNISPEKWNFEKLIANCVQEEE-RIKESNGGSINYVKDKKKNHKSPTSKGKQSQHL 259
Query: 410 RRESEMDSKTVVCYNCRKKGHVAKHCHN 437
++ + + C +C+K GH K C +
Sbjct: 260 PQQQQFAVEKDQCLHCKKTGHYKKDCSD 287
>gi|38345144|emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]
Length = 1405
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 103/266 (38%), Gaps = 21/266 (7%)
Query: 188 ELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEE------------- 234
++ G NY W ++++L +V +VLT PCPI E
Sbjct: 23 DIPTLKGDNYAEWKRKLDLAFILGEVDWVLTTPCPIEPADLVRGENESDADWQKRQRDNA 82
Query: 235 --VTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFG 292
V ++KW N C + N + + + + E E +K +
Sbjct: 83 PLVMSYDIEQKKWSLANKKCLAVVKNTIEPTILGSIPE-CDAVSEYLERIKSQFTGSS-K 140
Query: 293 TKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKD 352
T +Q+ K + + + V + L ++ +A + + I ++F V ++++ LP + +
Sbjct: 141 TYATQLIKQLVTERYHGGGVRDHILRMSNMASKLKPMDLGITDDFLVHLVMASLPKQFDN 200
Query: 353 FCIKL-MRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGP--RMREMSKK 409
F + + E F L+ + EEE R +V+ + P + ++
Sbjct: 201 FIVNYNISPEKWNFEKLIANCVQEEE-RIKESNGGSINYVKDKKKNHKSPTSKGKQSQHL 259
Query: 410 RRESEMDSKTVVCYNCRKKGHVAKHC 435
++ + + C +C+K GH K C
Sbjct: 260 PQQQQFAVEKDQCLHCKKTGHYKKDC 285
>gi|34015309|gb|AAQ56500.1| putative DNA-binding protein [Oryza sativa Japonica Group]
Length = 525
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 404 REMSKKRRESEMDSKTVVCYNCRKKGHVAKHC 435
R+ K+ + + SKT +CYNCR KGH+ K+C
Sbjct: 432 RQTGNKQVKKQDKSKTQLCYNCRAKGHIGKNC 463
>gi|357484173|ref|XP_003612373.1| Glutamate receptor 3.6 [Medicago truncatula]
gi|355513708|gb|AES95331.1| Glutamate receptor 3.6 [Medicago truncatula]
Length = 449
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 188 ELHRFNGKN-YRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWL 246
++ +F G N + +W +++ +L Q K L + P S+E E+ +
Sbjct: 6 DIEKFTGINDFGLWKVKMQAVLIQQKCEKALKGEGAL----PDTMSQE-------EKTEM 54
Query: 247 NDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQM 306
D R I+ L D + +K ++A +W +L+ +Y+ + ++ ++ F+M
Sbjct: 55 MDK--ARSAIVLCLGDKVLRDVAKEPTAA-SIWSKLESLYMTKSLAHRQFLKQQLYSFKM 111
Query: 307 FDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDF 353
+ K+V EQ E NKI D + + + + ++L LP S++ F
Sbjct: 112 VESKTVMEQLAEFNKILDDLENIEVQLEDEDKAILLLCALPRSFESF 158
>gi|331240260|ref|XP_003332781.1| hypothetical protein PGTG_14446 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309311771|gb|EFP88362.1| hypothetical protein PGTG_14446 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 291
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 98/248 (39%), Gaps = 32/248 (12%)
Query: 196 NYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNNICRHH 255
NY +W +E L +LK+ +L +V + + KW NN
Sbjct: 17 NYALWLLPMEARLFRLKLLDIL--------------EGQVEPDEKEQEKWTKLNNDAYAE 62
Query: 256 ILNFLSDHLYYQYSKRTSS-----AKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 310
I+ ++ + S + + LW+ LK Y ++ ++ + + +++ F
Sbjct: 63 IIAYIGQEVLGFVSSALPATPRFNGRGLWKLLKSQYAGDDLTSQTTALDQFLHLG-FSSI 121
Query: 311 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMD 370
+ F A+ I +G+++ + ++L KLP + F ++ M Y T +
Sbjct: 122 ATFIPAVRSGN--QKISMSGLVLDDRVRTILMLKKLPSDNRSFR-DIVSMNYGTES-FES 177
Query: 371 HIKAEEESRSHNKQEEPSKFVELSPAVNFGPRMREMSKKRRESEMDSKTVVCYNCRKKGH 430
IK E + N ++ L+P + R+ + + + + VC +C+K GH
Sbjct: 178 VIKKLESYVAQNDLDKKPSSTSLTPPQSLLTRLND--------QASASSTVCDHCKKPGH 229
Query: 431 VAKHCHNK 438
+C K
Sbjct: 230 RINNCWAK 237
>gi|255562647|ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus
communis]
gi|223538407|gb|EEF40013.1| Upstream activation factor subunit UAF30, putative [Ricinus
communis]
Length = 322
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 4 VNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLLS 61
V++ + + + E LKNSD+ T VR + E GIDLSD K FIR V+ FL S
Sbjct: 2 VSDSELIERLREFLKNSDLNTTTTGIVRRQLEEDFGIDLSD--KKAFIREQVDLFLQS 57
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.131 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,393,089,109
Number of Sequences: 23463169
Number of extensions: 246805010
Number of successful extensions: 807308
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 768
Number of HSP's that attempted gapping in prelim test: 805645
Number of HSP's gapped (non-prelim): 1578
length of query: 450
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 304
effective length of database: 8,933,572,693
effective search space: 2715806098672
effective search space used: 2715806098672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)