Query 013050
Match_columns 450
No_of_seqs 139 out of 1554
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 03:16:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013050.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013050hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dc8_A Dihydropyrimidinase; TI 100.0 9.4E-58 3.2E-62 449.8 39.4 425 3-449 18-452 (490)
2 3sfw_A Dihydropyrimidinase; hy 100.0 7.4E-56 2.5E-60 435.8 42.3 429 2-449 17-455 (461)
3 3e74_A Allantoinase; (beta/alp 100.0 2.3E-56 8E-61 439.0 37.8 426 2-449 39-470 (473)
4 3gri_A Dihydroorotase, dhoase; 100.0 2.2E-53 7.5E-58 413.7 38.9 407 2-437 16-424 (424)
5 3hm7_A Allantoinase; metallo-d 100.0 5.2E-53 1.8E-57 414.8 39.1 412 3-437 23-441 (448)
6 3mpg_A Dihydroorotase, dhoase; 100.0 8E-52 2.7E-56 404.0 37.0 408 2-439 18-427 (428)
7 1gkp_A Hydantoinase; hydrolase 100.0 4E-51 1.4E-55 403.2 42.2 429 3-449 17-453 (458)
8 2fty_A Dihydropyrimidinase; al 100.0 1.2E-51 4.2E-56 412.3 36.3 425 3-449 20-519 (559)
9 1gkr_A Hydantoinase, non-ATP d 100.0 5.9E-50 2E-54 394.9 40.2 426 3-449 19-451 (458)
10 1nfg_A D-hydantoinase; TIM bar 100.0 1E-49 3.4E-54 393.1 38.6 427 3-449 18-452 (457)
11 2ftw_A Dihydropyrimidine amido 100.0 1E-48 3.5E-53 390.2 40.3 427 2-449 24-464 (521)
12 2vm8_A Dihydropyrimidinase-rel 100.0 6.9E-48 2.4E-52 383.8 40.9 430 3-450 43-483 (501)
13 2vr2_A Dihydropyrimidinase; hy 100.0 1.1E-47 3.6E-52 384.3 41.2 429 3-449 44-487 (541)
14 2gwn_A Dihydroorotase; zinc-bi 100.0 8.4E-48 2.9E-52 377.7 34.6 422 2-449 20-450 (452)
15 2z00_A Dihydroorotase; zinc bi 100.0 5.5E-47 1.9E-51 370.2 38.4 407 2-437 17-426 (426)
16 1xrt_A Dihydroorotase, dhoase; 100.0 1.1E-45 3.8E-50 364.5 36.2 401 2-435 65-467 (467)
17 3gip_A N-acyl-D-glutamate deac 100.0 4.5E-39 1.5E-43 317.4 30.8 376 2-450 25-479 (480)
18 3pnu_A Dihydroorotase; TIM bar 100.0 1.1E-38 3.6E-43 298.2 22.4 327 35-423 22-358 (359)
19 1rk6_A D-aminoacylase; TIM bar 100.0 8.1E-37 2.8E-41 303.2 25.2 375 2-449 39-493 (496)
20 3h4u_A Amidohydrolase; signatu 100.0 3.6E-35 1.2E-39 290.8 26.7 365 2-447 50-464 (479)
21 2z26_A Dihydroorotase, dhoase; 100.0 1.6E-35 5.4E-40 279.0 22.9 332 35-423 4-346 (347)
22 4f0r_A 5-methylthioadenosine/S 100.0 4.1E-35 1.4E-39 287.8 20.3 360 2-447 26-426 (447)
23 3lnp_A Amidohydrolase family p 100.0 1.9E-34 6.4E-39 284.8 25.1 358 2-447 49-453 (468)
24 3ls9_A Triazine hydrolase; atr 100.0 1.2E-34 4.1E-39 285.3 23.2 361 2-447 21-445 (456)
25 3gnh_A L-lysine, L-arginine ca 100.0 4.9E-35 1.7E-39 283.5 19.8 333 2-434 21-402 (403)
26 4dyk_A Amidohydrolase; adenosi 100.0 4.1E-35 1.4E-39 288.2 18.8 359 2-447 28-428 (451)
27 2r8c_A Putative amidohydrolase 100.0 2.8E-34 9.4E-39 280.1 24.4 342 3-440 24-419 (426)
28 4dzh_A Amidohydrolase; adenosi 100.0 1.4E-34 5E-39 285.5 20.9 359 2-446 34-434 (472)
29 3feq_A Putative amidohydrolase 100.0 3.1E-34 1.1E-38 279.6 21.7 338 3-440 24-416 (423)
30 2paj_A Putative cytosine/guani 100.0 1.9E-33 6.5E-38 279.4 25.4 360 2-446 35-467 (492)
31 2ics_A Adenine deaminase; TIM 100.0 5.1E-34 1.7E-38 274.0 20.2 337 3-438 19-375 (379)
32 2vun_A Enamidase; nicotinate d 100.0 1.1E-31 3.7E-36 258.4 31.6 343 2-446 23-382 (386)
33 2qt3_A N-isopropylammelide iso 100.0 2E-32 6.7E-37 265.1 25.9 336 4-439 21-402 (403)
34 3hpa_A Amidohydrolase; signatu 100.0 3.7E-33 1.3E-37 276.2 21.0 366 2-447 50-464 (479)
35 2ogj_A Dihydroorotase; TIM bar 100.0 2.9E-32 1E-36 265.0 25.6 337 2-448 34-401 (417)
36 2p9b_A Possible prolidase; pro 100.0 9.5E-33 3.2E-37 271.7 20.4 343 3-439 33-439 (458)
37 3be7_A Zn-dependent arginine c 100.0 3.8E-32 1.3E-36 263.6 24.0 332 4-437 26-403 (408)
38 2ood_A BLR3880 protein; PSI-II 100.0 3.6E-33 1.2E-37 275.5 16.7 359 2-437 34-468 (475)
39 1e9y_B Urease subunit beta; hy 100.0 3.8E-32 1.3E-36 270.2 23.8 336 2-437 82-462 (569)
40 4aql_A Guanine deaminase; hydr 100.0 6.2E-32 2.1E-36 266.2 24.1 359 2-437 52-474 (476)
41 1ra0_A Cytosine deaminase; alp 100.0 7.6E-32 2.6E-36 263.1 23.6 350 3-440 23-416 (430)
42 1onw_A Isoaspartyl dipeptidase 100.0 1E-30 3.4E-35 251.9 29.0 343 3-446 25-387 (390)
43 2bb0_A Imidazolonepropionase; 100.0 2.6E-31 8.7E-36 258.7 24.1 330 3-439 37-420 (421)
44 2q09_A Imidazolonepropionase; 100.0 3.7E-31 1.3E-35 257.2 22.8 330 2-437 28-410 (416)
45 2i9u_A Cytosine/guanine deamin 100.0 6E-31 2E-35 257.5 24.4 351 2-437 30-431 (439)
46 4ac7_C Urease subunit alpha; h 100.0 1.1E-31 3.9E-36 262.5 18.4 334 2-435 83-460 (570)
47 1p1m_A Hypothetical protein TM 100.0 3.4E-32 1.2E-36 263.6 14.5 333 2-446 17-392 (406)
48 3nqb_A Adenine deaminase 2; PS 100.0 2.4E-30 8E-35 259.9 27.5 313 2-440 53-379 (608)
49 4ubp_C Protein (urease (chain 100.0 1.7E-31 5.9E-36 261.2 18.4 334 2-435 83-460 (570)
50 2qs8_A XAA-Pro dipeptidase; am 100.0 1.6E-30 5.6E-35 252.8 25.3 330 3-434 27-412 (418)
51 3v7p_A Amidohydrolase family p 100.0 2E-31 6.9E-36 259.1 17.8 363 2-445 17-415 (427)
52 4f0l_A Amidohydrolase; ssgcid, 100.0 1.8E-30 6.3E-35 255.4 22.6 347 2-440 27-441 (458)
53 2puz_A Imidazolonepropionase; 100.0 5.1E-30 1.7E-34 249.5 23.2 325 3-433 39-418 (419)
54 3mdu_A N-formimino-L-glutamate 100.0 2.8E-30 9.7E-35 253.2 20.0 347 2-440 17-436 (453)
55 2vhl_A N-acetylglucosamine-6-p 100.0 4.6E-30 1.6E-34 247.8 19.8 333 2-439 20-394 (396)
56 3ooq_A Amidohydrolase; structu 100.0 3.2E-28 1.1E-32 234.7 28.0 325 4-439 24-392 (396)
57 1yrr_A N-acetylglucosamine-6-p 100.0 6E-29 2.1E-33 238.7 19.9 337 2-435 17-382 (382)
58 3mtw_A L-arginine carboxypepti 100.0 7.5E-28 2.6E-32 230.7 21.8 339 2-433 21-401 (403)
59 4gy7_A Urease; JACK bean, hydr 100.0 1.7E-28 5.8E-33 251.8 17.8 157 2-178 353-524 (840)
60 3iv8_A N-acetylglucosamine-6-p 100.0 1.5E-27 5.2E-32 224.1 22.5 331 3-434 21-381 (381)
61 2imr_A Hypothetical protein DR 99.9 1.3E-27 4.3E-32 232.3 15.3 322 2-393 55-418 (420)
62 1o12_A N-acetylglucosamine-6-p 99.9 6.8E-27 2.3E-31 223.1 18.3 80 330-436 296-376 (376)
63 3icj_A Uncharacterized metal-d 99.9 3.3E-26 1.1E-30 226.3 21.0 251 65-396 228-504 (534)
64 3mkv_A Putative amidohydrolase 99.9 2.4E-25 8.2E-30 214.5 22.6 102 296-434 311-413 (426)
65 4ep8_C Urease subunit alpha; a 99.9 9.4E-27 3.2E-31 234.3 5.5 358 2-434 81-455 (566)
66 3ggm_A Uncharacterized protein 99.3 1.1E-12 3.8E-17 94.7 4.4 54 3-56 23-76 (81)
67 1bf6_A Phosphotriesterase homo 99.1 3.6E-09 1.2E-13 96.8 19.5 255 42-371 6-291 (291)
68 2ob3_A Parathion hydrolase; me 99.1 8.4E-09 2.9E-13 95.8 19.2 277 42-371 16-325 (330)
69 1zzm_A Putative deoxyribonucle 99.1 1.9E-08 6.4E-13 90.3 20.2 244 43-372 5-258 (259)
70 2y1h_A Putative deoxyribonucle 99.0 5.7E-09 1.9E-13 94.5 16.4 243 42-372 5-265 (272)
71 3rcm_A TATD family hydrolase; 99.0 2.5E-08 8.5E-13 90.1 19.1 250 43-372 3-264 (287)
72 2vc7_A Aryldialkylphosphatase; 99.0 3.5E-08 1.2E-12 91.3 19.1 264 42-371 17-314 (314)
73 1yix_A Deoxyribonuclease YCFH; 98.9 1.1E-07 3.7E-12 85.6 20.4 241 43-372 3-256 (265)
74 1xwy_A DNAse TATD, deoxyribonu 98.9 3.2E-07 1.1E-11 82.5 21.4 248 43-372 5-262 (264)
75 2xio_A Putative deoxyribonucle 98.8 1.9E-07 6.6E-12 85.5 18.1 258 42-377 2-297 (301)
76 3ipw_A Hydrolase TATD family p 98.8 3.6E-07 1.2E-11 83.5 18.1 255 42-372 27-322 (325)
77 3gg7_A Uncharacterized metallo 98.8 1.7E-07 5.8E-12 82.8 15.3 236 43-376 3-248 (254)
78 1j6o_A TATD-related deoxyribon 98.7 7.2E-07 2.5E-11 80.2 17.0 241 43-372 13-265 (268)
79 3ovg_A Amidohydrolase; structu 98.7 1.9E-06 6.4E-11 80.2 19.9 279 42-387 21-345 (363)
80 4i6k_A Amidohydrolase family p 98.7 3.6E-06 1.2E-10 76.8 21.1 250 39-372 23-291 (294)
81 2gzx_A Putative TATD related D 98.7 2.5E-06 8.5E-11 76.6 19.7 243 43-372 2-255 (265)
82 3rhg_A Putative phophotriester 98.6 3.4E-06 1.2E-10 78.7 19.5 245 65-372 81-344 (365)
83 3k2g_A Resiniferatoxin-binding 98.5 2.1E-05 7.3E-10 73.4 21.4 240 63-372 90-354 (364)
84 3pnz_A Phosphotriesterase fami 98.5 1.2E-05 4.2E-10 73.8 19.3 159 152-372 166-328 (330)
85 3cjp_A Predicted amidohydrolas 98.5 1.8E-05 6.2E-10 71.2 19.9 230 43-372 4-264 (272)
86 3gtx_A Organophosphorus hydrol 98.4 1.6E-05 5.5E-10 73.5 16.8 267 42-371 32-339 (339)
87 2ffi_A 2-pyrone-4,6-dicarboxyl 98.3 1.1E-05 3.9E-10 73.2 15.3 248 42-372 13-279 (288)
88 3guw_A Uncharacterized protein 98.3 8.6E-06 3E-10 72.3 12.7 121 43-176 2-132 (261)
89 2dvt_A Thermophilic reversible 98.3 2.5E-05 8.6E-10 72.3 16.0 135 40-177 1-168 (327)
90 3e2v_A 3'-5'-exonuclease; stru 98.2 3.8E-05 1.3E-09 71.8 14.9 40 41-80 12-59 (401)
91 3tn4_A Phosphotriesterase; lac 98.2 0.00023 8E-09 66.0 20.1 260 42-370 52-358 (360)
92 2pgf_A Adenosine deaminase; me 98.0 6.3E-05 2.1E-09 70.7 13.7 144 153-372 214-358 (371)
93 4do7_A Amidohydrolase 2; enzym 97.9 0.00014 4.8E-09 66.5 13.2 249 43-372 5-288 (303)
94 2f6k_A Metal-dependent hydrola 97.9 0.0011 3.8E-08 60.5 18.7 130 43-177 3-158 (307)
95 4d9a_A 2-pyrone-4,6-dicarbaxyl 97.8 0.0037 1.3E-07 56.8 20.6 249 39-372 23-292 (303)
96 3rys_A Adenosine deaminase 1; 97.6 0.00099 3.4E-08 61.5 14.0 157 131-372 163-320 (343)
97 3iar_A Adenosine deaminase; pu 97.6 0.00071 2.4E-08 62.9 12.9 160 131-372 172-332 (367)
98 3pao_A Adenosine deaminase; st 97.3 0.00032 1.1E-08 64.3 6.8 157 131-372 160-317 (326)
99 3irs_A Uncharacterized protein 97.0 0.046 1.6E-06 49.3 17.2 231 61-376 49-285 (291)
100 3ij6_A Uncharacterized metal-d 96.7 0.023 7.9E-07 51.8 13.4 52 121-176 112-164 (312)
101 4gxw_A Adenosine deaminase; am 95.9 0.054 1.8E-06 50.5 10.8 161 131-372 180-341 (380)
102 2hbv_A 2-amino-3-carboxymucona 95.7 0.086 2.9E-06 48.5 11.6 110 62-176 61-180 (334)
103 2wm1_A 2-amino-3-carboxymucona 95.4 0.066 2.3E-06 49.3 9.4 109 62-176 57-177 (336)
104 4inf_A Metal-dependent hydrola 95.1 1.2 4.2E-05 41.3 17.3 66 108-177 147-214 (373)
105 2a3l_A AMP deaminase, AMPD; at 94.4 0.087 3E-06 52.9 7.8 99 236-372 542-641 (701)
106 3lgd_A Adenosine deaminase CEC 93.8 0.29 1E-05 47.3 9.9 124 131-312 291-416 (508)
107 3nur_A Amidohydrolase; TIM bar 92.5 0.76 2.6E-05 42.5 10.4 66 108-177 129-196 (357)
108 3qy7_A Tyrosine-protein phosph 91.3 7 0.00024 34.1 16.4 38 43-80 1-41 (262)
109 2w9m_A Polymerase X; SAXS, DNA 73.6 33 0.0011 33.8 12.1 36 43-80 328-363 (578)
110 2wje_A CPS4B, tyrosine-protein 71.5 2.6 9E-05 36.5 3.3 40 41-80 3-45 (247)
111 2gwg_A 4-oxalomesaconate hydra 67.7 24 0.00083 32.0 9.2 59 119-177 122-182 (350)
112 4dzi_A Putative TIM-barrel met 66.8 29 0.001 32.6 9.7 116 61-177 103-234 (423)
113 2qpx_A Predicted metal-depende 65.8 77 0.0026 29.1 12.2 22 351-372 344-370 (376)
114 1v77_A PH1877P, hypothetical p 60.9 14 0.0005 30.9 5.8 55 298-372 155-209 (212)
115 1xky_A Dihydrodipicolinate syn 60.5 52 0.0018 29.2 9.6 108 59-174 33-145 (301)
116 2wkj_A N-acetylneuraminate lya 56.7 71 0.0024 28.3 9.9 108 59-174 32-145 (303)
117 1itu_A Renal dipeptidase; glyc 52.8 1.3E+02 0.0045 27.5 11.0 181 121-372 133-336 (369)
118 3flu_A DHDPS, dihydrodipicolin 50.2 1.2E+02 0.0041 26.7 10.3 111 56-174 25-140 (297)
119 3p6l_A Sugar phosphate isomera 50.2 1.1E+02 0.0036 26.1 9.9 108 121-264 24-137 (262)
120 3b4u_A Dihydrodipicolinate syn 49.3 1.3E+02 0.0044 26.4 10.3 110 57-174 22-140 (294)
121 3e96_A Dihydrodipicolinate syn 48.8 65 0.0022 28.8 8.3 109 57-174 31-144 (316)
122 2ki0_A DS119; beta-alpha-beta, 48.4 9.2 0.00032 20.3 1.5 22 151-172 12-33 (36)
123 2nuw_A 2-keto-3-deoxygluconate 47.3 1.5E+02 0.005 26.0 12.7 111 57-174 18-130 (288)
124 3l21_A DHDPS, dihydrodipicolin 47.2 1.3E+02 0.0043 26.7 9.9 110 57-174 34-148 (304)
125 2r91_A 2-keto-3-deoxy-(6-phosp 46.8 1.5E+02 0.005 25.9 11.2 108 59-174 19-129 (286)
126 2ehh_A DHDPS, dihydrodipicolin 46.4 1.2E+02 0.004 26.7 9.5 108 59-174 21-133 (294)
127 3lmz_A Putative sugar isomeras 46.2 1.3E+02 0.0046 25.3 11.2 104 60-176 31-135 (257)
128 1w3i_A EDA, 2-keto-3-deoxy glu 45.4 1.6E+02 0.0054 25.9 12.2 110 58-174 19-130 (293)
129 1eye_A DHPS 1, dihydropteroate 45.4 1.6E+02 0.0053 25.8 12.4 98 122-238 32-132 (280)
130 3cpr_A Dihydrodipicolinate syn 45.3 1.6E+02 0.0055 26.0 11.0 111 56-174 34-149 (304)
131 3m5v_A DHDPS, dihydrodipicolin 45.0 1.5E+02 0.0052 26.1 10.1 109 58-174 27-141 (301)
132 3s5o_A 4-hydroxy-2-oxoglutarat 44.7 1.4E+02 0.0048 26.4 9.8 115 56-174 32-149 (307)
133 2yxg_A DHDPS, dihydrodipicolin 44.5 1.1E+02 0.0039 26.7 9.1 109 58-174 20-133 (289)
134 2nx9_A Oxaloacetate decarboxyl 42.6 1.8E+02 0.006 27.6 10.6 106 63-179 104-213 (464)
135 4dpp_A DHDPS 2, dihydrodipicol 42.6 2E+02 0.0067 26.2 11.5 51 123-176 84-137 (360)
136 3si9_A DHDPS, dihydrodipicolin 42.5 1.4E+02 0.0049 26.5 9.5 109 58-174 42-155 (315)
137 3tak_A DHDPS, dihydrodipicolin 42.2 1.3E+02 0.0044 26.4 9.1 110 57-174 20-134 (291)
138 3p6l_A Sugar phosphate isomera 41.8 1.6E+02 0.0054 24.9 12.1 104 60-175 23-136 (262)
139 3na8_A Putative dihydrodipicol 41.3 94 0.0032 27.7 8.1 109 58-174 44-157 (315)
140 3d0c_A Dihydrodipicolinate syn 41.1 1.2E+02 0.004 27.1 8.7 109 57-174 31-144 (314)
141 3m5v_A DHDPS, dihydrodipicolin 40.5 1.1E+02 0.0038 27.0 8.4 51 123-176 32-86 (301)
142 2r8w_A AGR_C_1641P; APC7498, d 39.8 1.4E+02 0.0048 26.8 9.1 110 57-174 53-167 (332)
143 3qze_A DHDPS, dihydrodipicolin 38.1 1.4E+02 0.0049 26.5 8.8 110 57-174 42-156 (314)
144 3flu_A DHDPS, dihydrodipicolin 37.4 1.8E+02 0.006 25.6 9.3 51 123-176 32-85 (297)
145 1aj0_A DHPS, dihydropteroate s 37.3 2.1E+02 0.0072 25.0 13.2 98 122-239 41-142 (282)
146 1f6k_A N-acetylneuraminate lya 36.5 1.7E+02 0.0058 25.6 9.0 110 57-174 22-137 (293)
147 2v9d_A YAGE; dihydrodipicolini 36.2 1.5E+02 0.0052 26.7 8.7 111 56-174 49-164 (343)
148 1o5k_A DHDPS, dihydrodipicolin 35.2 1.1E+02 0.0039 27.0 7.6 108 59-174 33-145 (306)
149 2yxo_A Histidinol phosphatase; 34.8 24 0.0008 30.5 3.0 36 43-79 1-36 (267)
150 3daq_A DHDPS, dihydrodipicolin 34.4 1.4E+02 0.0049 26.1 8.1 108 59-174 23-135 (292)
151 3l21_A DHDPS, dihydrodipicolin 33.8 1.5E+02 0.0052 26.2 8.2 50 124-176 41-93 (304)
152 3fkr_A L-2-keto-3-deoxyarabona 33.6 1.5E+02 0.0053 26.2 8.2 51 123-176 33-86 (309)
153 2ojp_A DHDPS, dihydrodipicolin 33.5 1.2E+02 0.0041 26.6 7.5 110 57-174 20-134 (292)
154 3h5d_A DHDPS, dihydrodipicolin 32.9 2.6E+02 0.0089 24.7 11.1 111 56-174 25-141 (311)
155 3dz1_A Dihydrodipicolinate syn 32.2 2.7E+02 0.0091 24.7 10.0 111 57-174 27-141 (313)
156 2vc6_A MOSA, dihydrodipicolina 32.0 1.2E+02 0.0043 26.5 7.3 108 59-174 21-133 (292)
157 2i5g_A Amidohydrolase; NYSGXRC 31.8 2.8E+02 0.0095 24.8 11.9 32 340-371 289-320 (325)
158 3s5o_A 4-hydroxy-2-oxoglutarat 31.7 1.6E+02 0.0056 26.0 8.1 50 124-176 40-92 (307)
159 2rfg_A Dihydrodipicolinate syn 31.4 1.1E+02 0.0039 26.9 7.0 108 59-174 21-133 (297)
160 1m65_A Hypothetical protein YC 31.1 33 0.0011 29.1 3.3 36 43-79 3-38 (245)
161 3qze_A DHDPS, dihydrodipicolin 31.0 1.9E+02 0.0065 25.7 8.4 50 124-176 49-101 (314)
162 1xky_A Dihydrodipicolinate syn 30.6 2.4E+02 0.0083 24.8 9.0 50 124-176 38-90 (301)
163 3si9_A DHDPS, dihydrodipicolin 30.5 1.8E+02 0.006 25.9 8.1 50 124-176 48-100 (315)
164 4dpp_A DHDPS 2, dihydrodipicol 30.4 2.6E+02 0.009 25.4 9.2 107 59-174 80-190 (360)
165 3tak_A DHDPS, dihydrodipicolin 30.4 2E+02 0.0069 25.1 8.4 51 123-176 26-79 (291)
166 3a5f_A Dihydrodipicolinate syn 30.3 2.2E+02 0.0076 24.8 8.7 50 124-176 27-79 (291)
167 3fkr_A L-2-keto-3-deoxyarabona 30.0 2E+02 0.0069 25.4 8.4 113 57-174 27-144 (309)
168 1rqb_A Transcarboxylase 5S sub 29.9 3.5E+02 0.012 26.1 10.5 106 63-179 121-232 (539)
169 3daq_A DHDPS, dihydrodipicolin 29.8 1.9E+02 0.0064 25.4 8.1 51 123-176 27-80 (292)
170 3b4u_A Dihydrodipicolinate syn 29.8 2.3E+02 0.0079 24.8 8.7 51 123-176 28-81 (294)
171 3cpr_A Dihydrodipicolinate syn 29.6 2.9E+02 0.0099 24.3 9.5 50 124-176 42-94 (304)
172 3a5f_A Dihydrodipicolinate syn 29.3 1.3E+02 0.0044 26.4 6.9 111 56-174 19-134 (291)
173 2ehh_A DHDPS, dihydrodipicolin 28.9 2.3E+02 0.0079 24.7 8.6 51 123-176 25-78 (294)
174 3na8_A Putative dihydrodipicol 28.5 1.9E+02 0.0063 25.7 7.9 50 124-176 50-102 (315)
175 2hmc_A AGR_L_411P, dihydrodipi 28.0 1.9E+02 0.0066 26.1 8.0 80 122-266 50-129 (344)
176 1tx2_A DHPS, dihydropteroate s 27.2 3.2E+02 0.011 24.0 14.6 121 123-262 67-205 (297)
177 3eb2_A Putative dihydrodipicol 27.2 1.3E+02 0.0045 26.5 6.6 110 57-174 23-137 (300)
178 2wkj_A N-acetylneuraminate lya 27.1 2.3E+02 0.0079 24.9 8.2 50 124-176 37-89 (303)
179 2yxg_A DHDPS, dihydrodipicolin 27.0 2.3E+02 0.008 24.7 8.2 51 123-176 25-78 (289)
180 3lmz_A Putative sugar isomeras 26.8 2.8E+02 0.0096 23.2 11.3 50 121-174 32-81 (257)
181 3aal_A Probable endonuclease 4 26.4 3.1E+02 0.011 23.6 10.3 54 121-174 20-74 (303)
182 1mli_A Muconolactone isomerase 26.2 44 0.0015 23.8 2.6 42 352-393 14-60 (96)
183 3ly0_A Dipeptidase AC. metallo 25.8 3.8E+02 0.013 24.4 10.8 184 121-372 147-353 (364)
184 2yb1_A Amidohydrolase; HET: AM 25.6 56 0.0019 28.7 3.9 36 43-80 3-38 (292)
185 3qfe_A Putative dihydrodipicol 25.4 2.4E+02 0.0081 25.1 8.0 80 122-266 35-117 (318)
186 3aam_A Endonuclease IV, endoiv 25.3 3.1E+02 0.01 23.1 14.5 116 122-264 17-142 (270)
187 2anu_A Hypothetical protein TM 25.2 57 0.0019 27.9 3.8 35 43-79 21-55 (255)
188 3dz1_A Dihydrodipicolinate syn 24.8 2.6E+02 0.0088 24.8 8.1 51 123-176 33-85 (313)
189 1o5k_A DHDPS, dihydrodipicolin 24.7 2.5E+02 0.0087 24.7 8.1 50 124-176 38-90 (306)
190 2vc6_A MOSA, dihydrodipicolina 23.8 2.2E+02 0.0074 24.9 7.4 51 123-176 25-78 (292)
191 2bdq_A Copper homeostasis prot 23.8 2E+02 0.0068 24.1 6.6 47 122-174 79-125 (224)
192 3h5d_A DHDPS, dihydrodipicolin 23.5 3.2E+02 0.011 24.1 8.5 51 123-176 32-85 (311)
193 2r8w_A AGR_C_1641P; APC7498, d 23.1 2.8E+02 0.0094 24.8 8.0 51 123-176 59-112 (332)
194 1f6k_A N-acetylneuraminate lya 22.9 2.7E+02 0.0094 24.3 7.9 51 123-176 28-82 (293)
195 3o0f_A Putative metal-dependen 22.9 3.9E+02 0.013 23.5 8.7 72 94-173 186-259 (301)
196 3dcp_A Histidinol-phosphatase; 22.8 77 0.0026 27.7 4.2 36 43-78 2-37 (283)
197 3a24_A Alpha-galactosidase; gl 22.8 1.2E+02 0.004 30.2 5.7 106 63-174 313-425 (641)
198 3fok_A Uncharacterized protein 22.7 87 0.003 27.7 4.3 48 124-173 133-182 (307)
199 2rfg_A Dihydrodipicolinate syn 21.9 2.5E+02 0.0086 24.6 7.4 51 123-176 25-78 (297)
200 2v9d_A YAGE; dihydrodipicolini 21.9 2.7E+02 0.0093 25.0 7.7 50 124-176 57-109 (343)
201 2q01_A Uronate isomerase; stru 21.6 5.3E+02 0.018 24.6 11.2 28 346-373 442-473 (497)
202 2r91_A 2-keto-3-deoxy-(6-phosp 21.5 4E+02 0.014 23.1 9.1 51 123-176 23-73 (286)
203 1m3u_A 3-methyl-2-oxobutanoate 21.4 3.9E+02 0.013 23.0 11.1 44 121-176 96-139 (264)
204 2d73_A Alpha-glucosidase SUSB; 20.0 2E+02 0.007 28.9 6.8 53 122-174 452-508 (738)
No 1
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.4e-58 Score=449.81 Aligned_cols=425 Identities=24% Similarity=0.349 Sum_probs=370.3
Q ss_pred ceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCC--CcccchHHHHHHHHhCCceEEEeCC
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGFPSGTKAAAAGGITTLIDMP 80 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~--~~~~~~~~~~~~~~~~GvT~~~~~~ 80 (450)
.++|+|+||+|++|++..+ +.++||++|++|+|||||+|+|+..+.. ...+++....+.++++|||++++++
T Consensus 18 ~~~v~I~~G~I~~i~~~~~------~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~~~aa~~~GvTtv~~~~ 91 (490)
T 3dc8_A 18 KADVKVEGGRIVEIGPNLS------GAETLDATGCYVMPGGIDPHTHLEMPFMGTYSSDDFESGTRAALAGGTTMVVDFA 91 (490)
T ss_dssp ECEEEEETTEEEEEESSCC------CSEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHHHHHHHHHTTEEEEEEEE
T ss_pred eeeEEEECCEEEEeccCCC------CCeEEECCCCEEecCEEeeccccCCCCCCCCCHHHHHHHHHHHHHcCEEeecccC
Confidence 5789999999999997532 5689999999999999999999988765 6778899999999999999999998
Q ss_pred CCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHH-HcCCcEEEEecccCCCCCCCCCCHHHHHHH
Q 013050 81 LNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEG 159 (450)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (450)
++.+.....+.+....+... ...+++.+++.+...+.+.++++.++. +.|+.+++.|+.+. +.+.++.+.+.++
T Consensus 92 -~~~p~~~~~~~~~~~~~~a~-~~~~d~~~~~~~~~~~~~~l~el~~l~~~~G~~~~k~~~~~~---~~~~~~~~~l~~~ 166 (490)
T 3dc8_A 92 -LPSPGQSLLEALTMWDNKST-RANCDYSFHMAITWWGEQVFNEMETIVKDKGINTFKHFMAYK---GALMVDDDEMFSS 166 (490)
T ss_dssp -CCC-CCCHHHHHHHHHHHTT-TCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESCST---TTTBCCHHHHHHH
T ss_pred -CCCCCcCHHHHHHHHHHHhh-cccceeeeEEEEecCcHHHHHHHHHHHHhCCCCEEEEEecCC---CCccCCHHHHHHH
Confidence 67676666777777666665 667899888877776666678888888 79999999998763 3345789999999
Q ss_pred HHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecC
Q 013050 160 LSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS 239 (450)
Q Consensus 160 ~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~ 239 (450)
++.|+++|+++.+|+++...+..... ...+.+......+....|...|.+.+.+.+.+++.. +.++|+.|++
T Consensus 167 ~~~a~~~g~~v~~HaE~~~~i~~~~~-~~~~~g~~~~~~~~~~rP~~~E~~av~r~i~la~~~-------g~~lhi~HvS 238 (490)
T 3dc8_A 167 FQRCAALGALPLVHAENGDVVAQLQA-KLLAEGNSGPEAHAYSRPAEVEGEAANRAIMIADMA-------GCPVYIVHTS 238 (490)
T ss_dssp HHHHHHHTCEEEEECSCHHHHHHHHH-HHHHTTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHH-------TCCEEESSCC
T ss_pred HHHHHhcCCEEEEecCChHHHHHHHH-HHHhcCCCCccccccCCCHHHHHHHHHHHHHHHHHh-------CCcEEEEeCC
Confidence 99999999999999998876542111 111233334445667899999999999999999987 9999999999
Q ss_pred ChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCC----CCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCC
Q 013050 240 DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG----DTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT 315 (450)
Q Consensus 240 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~ 315 (450)
+. +.++.++.+++.|+.+++++||+++.++.+.+... +..++++||++...++..+|+++..|...+++||+.|+
T Consensus 239 t~-~~~~li~~ak~~G~~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d~~aL~~~l~~G~id~i~sDh~p~ 317 (490)
T 3dc8_A 239 CE-QAHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQVVATDHCAF 317 (490)
T ss_dssp SH-HHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGGHHHHHHHHHHTSSCCCBCCBCCC
T ss_pred CH-HHHHHHHHHHHCCCeEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCChHHHHHHHHHHhcCCceEEECCCCCC
Confidence 98 99999999999999999999999999999888766 67789999999999999999999999999999999999
Q ss_pred ChhhhcccCCCccccCCCCcchhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCC
Q 013050 316 VPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEA 393 (450)
Q Consensus 316 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~ 393 (450)
....+....++|...++|+.+++..++.++.. ....++|++++++++|.|||+++|+ ++.|+|++|+.|||+|||.+.
T Consensus 318 ~~~~K~~g~~~f~~~~~G~~gle~~l~~~~~~~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~l~~G~~ADlvv~d~~~ 397 (490)
T 3dc8_A 318 TTEQKRFGVGDFTRIPNGTGGLEDRMPMLWTYGVATGRITMNEFVAVTSTNIAKILNIYPKKGAILVGADADLVVWDPKR 397 (490)
T ss_dssp CHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEEEEE
T ss_pred CHHHhhccCCChhhCCCChHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCCcCCEEEEecCc
Confidence 99988777779999999999999999999887 4567899999999999999999999 789999999999999999998
Q ss_pred ceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCcccCC-CCCccccc
Q 013050 394 EFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPA-ACGSPILA 449 (450)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~-~~g~~~~~ 449 (450)
++++..+ .+.++.. ++||.|..+.++|..||++|++||++|+++.. ..||++++
T Consensus 398 ~~~i~~~-~~~s~~~-~sp~~g~~~~g~v~~t~~~G~~v~~~g~~~~~~~~G~~~~~ 452 (490)
T 3dc8_A 398 SKTISAK-TQQSAID-YNVFEGKTVTGLPRFTLTRGVVSIEEGTVKTQEGHGEFVRR 452 (490)
T ss_dssp EEECCTT-TCSSSSS-CCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCC
T ss_pred ceEechh-hccccCC-CCcccCcEEeeEEEEEEECCEEEEECCEEcccCCCceeccC
Confidence 8999888 8888888 99999999999999999999999999999976 58999976
No 2
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=100.00 E-value=7.4e-56 Score=435.84 Aligned_cols=429 Identities=27% Similarity=0.391 Sum_probs=366.2
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCC--CCCcccchHHHHHHHHhCCceEEEeC
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP--GRTEWEGFPSGTKAAAAGGITTLIDM 79 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~--~~~~~~~~~~~~~~~~~~GvT~~~~~ 79 (450)
..++|+|+||+|++|++..+. .+.++||++|++|+|||||+|+|+..+ +....+++....+.++++|||+++++
T Consensus 17 ~~~~v~i~~g~I~~i~~~~~~----~~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~~~~~~~~GvTt~~~~ 92 (461)
T 3sfw_A 17 YQADVLIDGEKVVAIGSDLQA----TDAEVIDATGYYLLPGGIDPHTHLDMPFGGTVTSDNFFTGTKAAAFGGTTSIVDF 92 (461)
T ss_dssp EECEEEEETTEEEEEESCCCC----SSCEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHHHHHHHHHTTEEEEEEE
T ss_pred EEEEEEEECCEEEEEeCCCCC----CCCeEEECCCCEEEeeeEEeEeccCcCCCCcccHhHHHHHHHHHHhCCEEEEEcc
Confidence 357999999999999986532 467899999999999999999999875 44566789999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHH-cCCcEEEEecccCCCCCCCCCCHHHHHH
Q 013050 80 PLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKE 158 (450)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (450)
+ ++.+.......+....+.......+++.+++.......+..+.+.++.+ .|+.+++.++.+.+ .+..+.+.+.+
T Consensus 93 ~-~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~ik~~~~~~~---~~~~~~~~l~~ 168 (461)
T 3sfw_A 93 C-LTSKGESLHSAIATWHEKARGKAVIDYGFHLMVSDANDHVLEELESVVNNEGITSLKVFMAYKN---VLMADDETLFK 168 (461)
T ss_dssp E-CCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSCCCHHHHHHHHHHHHTSCCCEEEEESSSTT---TTBCCHHHHHH
T ss_pred C-CCCCcchHHHHHHHHHHHhhcCcEEEEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEEEEecCC---CcccCHHHHHH
Confidence 7 6666666677777766666667788888887776656667888999999 99999999887642 24688999999
Q ss_pred HHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEec
Q 013050 159 GLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHL 238 (450)
Q Consensus 159 ~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~ 238 (450)
+++.|+++|+++.+|+++...+........ +.+......+....|...+.+.+.+++.+++.. +.++|+.|+
T Consensus 169 ~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~-~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~-------g~~~hi~H~ 240 (461)
T 3sfw_A 169 TLIRAKELGALVQVHAENGDVLDYLTKQAL-AEGNTDPIYHAYTRPPEAEGEATGRAIALTALA-------DAQLYVVHV 240 (461)
T ss_dssp HHHHHHHHTCEEEEECSCHHHHHHHHHHHH-HTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHT-------TCEEEECSC
T ss_pred HHHHHHhcCCEEEEEcCCHHHHHHHHHHHH-hcCCCChhHhcccCCHHHHHHHHHHHHHHHHHh-------CCCEEEEec
Confidence 999999999999999998876553322211 233334445667889999999999999999977 999999999
Q ss_pred CChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCC---CCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCC
Q 013050 239 SDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT 315 (450)
Q Consensus 239 ~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~ 315 (450)
++. +.++.++.+++.|+.+++++||+++.++.+.+.. .+..++++||++...++..+|+++..|..++++||+.|+
T Consensus 241 s~~-~~l~~i~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~Pplr~~~~~~aL~~~l~~G~~~~i~sD~~p~ 319 (461)
T 3sfw_A 241 SCA-DAVRRIAEAREKGWNVYGETCPQYLVLDITALEKPDFEGAKYVWSPPLREKWNQDVLWSALKNGILQTVGSDHCPF 319 (461)
T ss_dssp CSH-HHHHHHHHHHHTTCEEEEEECHHHHHCCGGGGGCTTTGGGGGCCSSCCCCTHHHHHHHHHHHTTSSCEECCCBCCC
T ss_pred CcH-HHHHHHHHHHhcCCcEEEeeccceEEEcHHHhcCccccCCcEEEcCCCCChHHHHHHHHHHhcCCceEEECCCCCC
Confidence 998 9999999999999999999999999999888765 467789999999999999999999999999999999998
Q ss_pred Chh-hhcccCCCccccCCCCcchhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCC
Q 013050 316 VPE-LKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPE 392 (450)
Q Consensus 316 ~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~ 392 (450)
... .+....+.|...+.|+.+.+..++.+++.. ...++|++++++++|.|||+++|+ ++.|+|++|+.|||+|+|.+
T Consensus 320 ~~~~~k~~~~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~~~~G~l~~G~~Ad~~~~d~~ 399 (461)
T 3sfw_A 320 NFSGQKELGRRDFTKIPNGGPIIEDRMTILFSEGVRKGKISLNQFVDITSTKVAKLFGMFPQKGTIAVGSDADIVLFDPT 399 (461)
T ss_dssp CTTTTGGGGTTCGGGSCCCBCCTTTHHHHHHHHTTTTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCSTTSBCCEEEEEEE
T ss_pred CchhhhhcccCCHhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHcCCCCCCCccCCCCcCCEEEEcCC
Confidence 743 333344689999999999999999988754 455699999999999999999999 78999999999999999999
Q ss_pred CceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCcccCC-CCCccccc
Q 013050 393 AEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPA-ACGSPILA 449 (450)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~-~~g~~~~~ 449 (450)
.+++++.+ ++.+... ++||.|..+.++|..|||+|++||++|++++. ..|++|++
T Consensus 400 ~~~~~~~~-~~~~~~~-~sp~~g~~~~~~v~~t~v~G~~v~~~g~~~~~~~~G~~~~~ 455 (461)
T 3sfw_A 400 VQRTISVE-THHMNVD-YNPFEGMQVHGDVISVLSRGAFVVRNKQFVGHAGAGRYVKR 455 (461)
T ss_dssp EEEECCTT-TCCSSSS-CCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCC
T ss_pred CCEEEchH-HcccccC-CCCCCCCEecceEEEEEECCEEEEECCeeccCCCCceEecC
Confidence 88888887 8888888 99999999999999999999999999999976 47999976
No 3
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=100.00 E-value=2.3e-56 Score=439.03 Aligned_cols=426 Identities=37% Similarity=0.646 Sum_probs=357.5
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCC
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPL 81 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~ 81 (450)
..++|+|+||+|++|++..+. ..++||++|++|+|||||+|+|+..++..+++++....+.++++|||+++++++
T Consensus 39 ~~~~v~i~~g~I~~i~~~~~~-----~~~~id~~g~~v~PG~iD~H~H~~~~g~~~~~~~~~~~~~~~~~G~Tt~~~~~~ 113 (473)
T 3e74_A 39 RVVDIAVKGGKIAAIGQDLGD-----AKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPL 113 (473)
T ss_dssp EECEEEEETTEEEEEESCCCC-----EEEEEECTTCEEEECEEEEEECC---------CHHHHHHHHHHTTEEEEEECCS
T ss_pred eeeeEEEECCEEEEEcCCCCC-----CCcEEECCCCEEecCEEEEecccCCCCCCcHHHHHHHHHHHHhCCEEEEEcCcc
Confidence 357899999999999986432 267999999999999999999999888888889999999999999999999975
Q ss_pred CCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCcEEEEecccCCC----CCCCCCCHHHHH
Q 013050 82 NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGI----NDFPMTNASHIK 157 (450)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~l~ 157 (450)
++.|.....+.+....+.......+++..++.....+ .+.+.++.+.|+.++|.|+.+.+. +..+..+.+.+.
T Consensus 114 ~t~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~---~~~l~~l~~~G~~~~K~~~~~~~~~~~~~~~~~~~~~~l~ 190 (473)
T 3e74_A 114 NQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYN---IDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFF 190 (473)
T ss_dssp SSSSCSCSHHHHHHHHHHHTTTCSSEEEECEECCTTC---TTTHHHHHHHTCSCEEEEC------------CCCCHHHHH
T ss_pred cCCCCcccHHHHHHHHHHhccCCeEEEEEEeecccch---HHHHHHHHHcCCCEEEEeccccCCcccccccCCCCHHHHH
Confidence 6777777888888877777777788998887665543 456778888999999999875432 234567889999
Q ss_pred HHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEe
Q 013050 158 EGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVH 237 (450)
Q Consensus 158 ~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h 237 (450)
++++.|+++|+++.+|+++...+... .....+.+......+....|...+...+.+++.+++.. +.++|+.|
T Consensus 191 ~~~~~a~~~g~~v~~H~e~~~~~~~~-~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la~~~-------g~~lhi~H 262 (473)
T 3e74_A 191 KGAQKLGELGQPVLVHCENALICDEL-GEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVA-------GCRLHVCH 262 (473)
T ss_dssp HHHHHHHHHTCCEEEECSCHHHHHHH-HHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHH-------TCCEEECS
T ss_pred HHHHHHHhcCCeEEEEecCHHHHHHH-hhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHHHHh-------CCcEEEEe
Confidence 99999999999999999887544321 11111333444455667899999999999999999987 89999999
Q ss_pred cCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCCh
Q 013050 238 LSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVP 317 (450)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~ 317 (450)
+++. ++++.++++++.|+.++++++|+++.++.+.+...+..++++||++...++..+|++++.|+.++++||+.|...
T Consensus 263 vst~-~~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~~~~i~tDh~p~~~ 341 (473)
T 3e74_A 263 VSSP-EGVEEVTRARQEGQDITCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPP 341 (473)
T ss_dssp CCSH-HHHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHHHCGGGCCSSCCCCHHHHHHHHHHHHTTCCCEECCCBCCCCT
T ss_pred CCCH-HHHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHhCCCCcEEEeCCCCCCH
Confidence 9998 999999999999999999999999999988877777888999999999999999999999999999999999988
Q ss_pred hhhcccCCCccccCCCCcchhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCcee
Q 013050 318 ELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFE 396 (450)
Q Consensus 318 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~ 396 (450)
..+ .++|+..+.|+.+.+..++.++.. ..+.++|++++++++|.|||+++|+++.|+|++|+.|||||+|.+.+++
T Consensus 342 ~~k---~~~f~~~~~G~~g~e~~l~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~~~G~l~~G~~AD~vv~d~~~~~~ 418 (473)
T 3e74_A 342 EMK---AGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYV 418 (473)
T ss_dssp TTT---CSCTTTSCCCBCCGGGHHHHHHHHHTTTTCCCHHHHHHHHTHHHHHHTTCTTSSCCSTTSBCCEEEEESSCCEE
T ss_pred HHc---ccChhhcCCCcccHHhHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCCCCccCCCCccCEEEEeCCCCEE
Confidence 776 457999999999999999998874 4677899999999999999999999658999999999999999999899
Q ss_pred eCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEe-cCcccCCCCCccccc
Q 013050 397 LDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYK-EGNHAPAACGSPILA 449 (450)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~-~g~~~~~~~g~~~~~ 449 (450)
+..+ ++.+... ++||.|..+.++|..||++|++||+ ||+++++..|++|++
T Consensus 419 ~~~~-~~~~~~~-~sp~~g~~~~g~v~~t~v~G~~v~~~~g~~~~~~~G~~~~~ 470 (473)
T 3e74_A 419 LTND-DLEYRHK-VSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILK 470 (473)
T ss_dssp CCGG-GCCSSSC-CCTTTTCEESCEEEEEEETTEEEEETTTBCCSCCCCCEECC
T ss_pred ECHH-HccccCC-CCCCCCCEEeeEEEEEEECCEEEEecCCeEccCCCceeecC
Confidence 8877 7888888 9999999999999999999999999 999998889999986
No 4
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.2e-53 Score=413.74 Aligned_cols=407 Identities=25% Similarity=0.387 Sum_probs=347.6
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCC
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPL 81 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~ 81 (450)
.+++|+|+||+|++|++..+.+ .+.++||++|++|+|||||+|+|+..++....+++....+.++++|||++++++
T Consensus 16 ~~~~v~i~~g~I~~i~~~~~~~---~~~~~id~~g~~v~PG~iD~H~H~~~~g~~~~~~~~~~~~~~~~~G~t~~~~~~- 91 (424)
T 3gri_A 16 QQADILIDGKVIKQIAPAIEPS---NGVDIIDAKGHFVSPGFVDVHVHLREPGGEYKETIETGTKAAARGGFTTVCPMP- 91 (424)
T ss_dssp EECEEEEETTEEEEEESCCCCC---SSCEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECS-
T ss_pred eeeeEEEECCEEEEecCCCCCC---CCCeEEECCCCEEEeCeEEeeecCCCCCCCCHHHHHHHHHHHHhCCEEEEeECc-
Confidence 4689999999999999865432 367899999999999999999999988877788899999999999999999998
Q ss_pred CCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCC-CccchHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHH
Q 013050 82 NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGL 160 (450)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (450)
++.+.....+.+....+.......+++..++.+... ..+..+.+.++.+.|+.++.. ++.+..+.+.+++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~~~~~~-------~~~~~~~~~~l~~~~ 164 (424)
T 3gri_A 92 NTRPVPDSVEHFEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPALVKEGAFAFTD-------DGVGVQTASMMYEGM 164 (424)
T ss_dssp CSSSCSCSHHHHHHHHHHHHHHCSSEECCCEESBGGGCSSSBCCHHHHHTTTCCCEEE-------CSSCCCSHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHhccCCCceEEEEEEEecCCCcchHHHHHHHHhcCcEEEec-------CCcCcCCHHHHHHHH
Confidence 777777778888777777766555666666555433 233455677888889888754 333467899999999
Q ss_pred HHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCC
Q 013050 161 SVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD 240 (450)
Q Consensus 161 ~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~ 240 (450)
+.|+++|+++.+|+++...+..... +.+......+....|...+...+.+.+.+++.. +.++|+.|+++
T Consensus 165 ~~a~~~g~~v~~H~e~~~~~~~~~~----~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~-------g~~~~i~H~s~ 233 (424)
T 3gri_A 165 IEAAKVNKAIVAHCEDNSLIYGGAM----HEGKRSKELGIPGIPNICESVQIARDVLLAEAA-------GCHYHVCHVST 233 (424)
T ss_dssp HHHHHHTCCEEECCCCGGGCTTCCE----ESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHH-------TCCEEECSCCC
T ss_pred HHHHhcCCEEEEeCCCHHHHhhhhh----hcCccchhhCCCCCCHHHHHHHHHHHHHHHHHh-------CCcEEEEeCCC
Confidence 9999999999999988775442221 223333445567788889999999999999987 99999999999
Q ss_pred hhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhh
Q 013050 241 ASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK 320 (450)
Q Consensus 241 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~ 320 (450)
. +.++.++++++.|+.+++++||+++.++.+.+..++..++++||++...++..+|+++..|..++++||+.|+....+
T Consensus 234 ~-~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~igtDhap~~~~~k 312 (424)
T 3gri_A 234 K-ESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTIDCIATDHAPHARDEK 312 (424)
T ss_dssp H-HHHHHHHHHHHTTCCEEEEECHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHTTSSCEECCCBCCCCHHHH
T ss_pred H-HHHHHHHHHHHcCCCEEEEecHHHHhcCHHHHhCcCceEEEeCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHc
Confidence 8 999999999999999999999999999999888888899999999999999999999999999999999999998877
Q ss_pred cccCCCccccCCCCcchhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCC
Q 013050 321 LLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDN 399 (450)
Q Consensus 321 ~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~ 399 (450)
. .+|...+.|+.+.+..++.++.. ..+.++|++++++++|.|||+++|+ +.|+|++|+.|||+|+|.+.++++..
T Consensus 313 ~---~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~-~~g~l~~G~~Ad~~~~d~~~~~~~~~ 388 (424)
T 3gri_A 313 A---QPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCETFNL-EYGTLKENGYADLTIIDLDSEQEIKG 388 (424)
T ss_dssp T---SCTTTSCCCCCCTTTHHHHHHHHHTTTSSCCHHHHHHHHTHHHHHHTTC-SCSCCCTTSBCCEEEEESSCCEECCG
T ss_pred c---CCHhHCCCCCccccccHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCC-CCCcccCCCcCCEEEEcCCCCEEEch
Confidence 4 57999999999999999998865 4566799999999999999999999 68999999999999999998899887
Q ss_pred CCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCc
Q 013050 400 DHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGN 437 (450)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 437 (450)
+ ++.+... ++||.|..+.++|.+||++|++||++|+
T Consensus 389 ~-~~~~~~~-~sp~~g~~~~g~v~~t~~~G~~v~~~g~ 424 (424)
T 3gri_A 389 E-DFLSKAD-NTPFIGYKVYGNPILTMVEGEVKFEGDK 424 (424)
T ss_dssp G-GCSSSCC-CCTTTTCEESCEEEEEEETTEEEEEC--
T ss_pred h-hcccccC-CCCcCCCEEeeeEEEEEECCEEEEeCCC
Confidence 7 7888888 9999999999999999999999999985
No 5
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=100.00 E-value=5.2e-53 Score=414.84 Aligned_cols=412 Identities=38% Similarity=0.671 Sum_probs=354.5
Q ss_pred ceeEEEeCCEEEEecc--CCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCC
Q 013050 3 KRAVEIKEGNIISIVS--EEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMP 80 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~--~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~ 80 (450)
.++|+|+||+|++|++ ..+. .+.++||++|++|+|||||+|+|+..++....+++....+.++++|||++++++
T Consensus 23 ~~~v~i~~g~I~~i~~~~~~~~----~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~ 98 (448)
T 3hm7_A 23 RADVAIRNGIVSAITEPGSISS----DDGPAIDGTGLHLFPGMVDVHVHFNEPGRTEWEGFASGSKSLAAGGVTTYFDMP 98 (448)
T ss_dssp EEEEEEETTEEEEEESTTCSCT----TSSCEEECTTCEEEECEEEEEECCCTTTSGGGCCSHHHHHHHHTTTEEEEEECS
T ss_pred EeEEEEECCEEEEeeCccCCCC----CCCeEEECCCCEEecCEEEeeeccCCCCCCcHhHHHHHHHHHHhCCEEEEEeCC
Confidence 5789999999999998 3321 367899999999999999999999988777778889999999999999999997
Q ss_pred CCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHH
Q 013050 81 LNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGL 160 (450)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (450)
+++.+.....+.+....+.......+++..+++..+.. .+.+.++.+.|+.+++.++.+...+..+..+.+.+.+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~l~~~g~~~~~~~l~~~~~~~~~~~~~~~l~~~l 175 (448)
T 3hm7_A 99 LNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPGN---IDHLQDLHDGGVIGFKAFMSECGTDDFQFSHDETLLKGM 175 (448)
T ss_dssp SSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEECCTTC---GGGHHHHHHTTCSEEEEESSSCSSSSSCCCCHHHHHHHH
T ss_pred CCCCCCCChHHHHHHHHHHhccCCeeEEEEEEEecccC---HHHHHHHHHcCCCEEEEeeccccCCccCcCCHHHHHHHH
Confidence 56666677788887777766665677888877665443 556777788999999998877543333456899999999
Q ss_pred HHHHhcCCcEEEecCChhhhhh---hhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEe
Q 013050 161 SVLARYKRPLLVHAEMEKGSER---HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVH 237 (450)
Q Consensus 161 ~~a~~~g~~v~~H~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h 237 (450)
+.|+++|+++.+|+++...+.. .+. +.+......++...|...+.+.+.+++.++++. +.++|+.|
T Consensus 176 ~~a~~~g~~v~vH~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~-------g~~~~i~H 244 (448)
T 3hm7_A 176 KKIAALGSILAVHAESNEMVNALTTIAI----EEQRLTVKDYSEARPIVSELEAVERILRFAQLT-------CCPIHICH 244 (448)
T ss_dssp HHHHHHTCCEEEECCCHHHHHHHHHHHH----HTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHH-------TCCEEECC
T ss_pred HHHHhcCCEEEEEeCCHHHHHHHHHHHH----hcCCcChhhccccCCHHHHHHHHHHHHHHHHHh-------CCCEEEEe
Confidence 9999999999999998776542 233 333444555667889999999999999999987 89999999
Q ss_pred cCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCCh
Q 013050 238 LSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVP 317 (450)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~ 317 (450)
+++. +.++.++++++.|..+++++||+++.++.+.+...+..++++||++...++..+|+++..|..++++||+.|++.
T Consensus 245 ~s~~-~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~~~~i~tD~~p~~~ 323 (448)
T 3hm7_A 245 VSSR-KVLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLMAGEIDLISSDHSPSLP 323 (448)
T ss_dssp CCCH-HHHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHHHCSTTCCSSCCCCHHHHHHHHHHHHHTCCCEECCCBCCCCG
T ss_pred CCCH-HHHHHHHHHHhcCCCEEEEechHHHccCHHHhcCCCCeEEEcCCCCCHHHHHHHHHHHhcCCccEEEeCCCCCCH
Confidence 9998 999999999999999999999999999988877778889999999999999999999999999999999999988
Q ss_pred hhhcccCCCccccCCCCcchhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCce
Q 013050 318 ELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEF 395 (450)
Q Consensus 318 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~ 395 (450)
..+... +|...+.|+.+.+..++.+++.. ...++|++++++++|.|||+++|+ ++.|+|++|+.|||+|+|.+.++
T Consensus 324 ~~k~~~--~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~~~A~~~g~~~~~g~l~~G~~Ad~~~~d~~~~~ 401 (448)
T 3hm7_A 324 QMKTGK--TIFEVWGGIAGCQNTLAVMLTEGYHKRKMPLTQIVQLLSTEPAKRFGLYPQKGTIQVGAEASFTLIDLNESY 401 (448)
T ss_dssp GGGCCS--STTTSCCCBCCTTTHHHHHHHHTTTTTCCCHHHHHHHHTHHHHHHHTCTTTSSCCSTTSBCCEEEEEEEEEE
T ss_pred HHcccC--CHhhCCCCCccHHHHHHHHHHHHHhcCCcCHHHHHHHHhHHHHHHcCCCCCCCcccCCCcCCEEEEeCCCCE
Confidence 876432 58889999999999999988754 477899999999999999999999 78999999999999999999889
Q ss_pred eeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCc
Q 013050 396 ELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGN 437 (450)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 437 (450)
+++.+ ++.+... ++||.|..+.++|..||++|++||++++
T Consensus 402 ~~~~~-~~~~~~~-~sp~~g~~~~g~v~~t~~~G~~v~~~~~ 441 (448)
T 3hm7_A 402 TLNAS-DLYYRHP-ISPYVGQRFRGKVKHTICQGKHVYQDHE 441 (448)
T ss_dssp ECCGG-GCCSSSC-CCTTTTCEEEEEEEEEEETTEEEEECC-
T ss_pred EEChH-hcccccC-CCCCCCCEEEEEEEEEEECCEEEEECCC
Confidence 88877 7888888 9999999999999999999999999986
No 6
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=100.00 E-value=8e-52 Score=404.00 Aligned_cols=408 Identities=27% Similarity=0.430 Sum_probs=345.1
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCC
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPL 81 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~ 81 (450)
.+++|+|+||+|++|++..+. .+.++||++|++|+|||||+|+|+..++....+.+....+.++++|||++++++
T Consensus 18 ~~~~v~i~~g~I~~i~~~~~~----~~~~~id~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~- 92 (428)
T 3mpg_A 18 VATDLLVQDGKIAKVAENITA----DNAEVIDVNGKLIAPGLVDVHVHLREPGGEHKETIETGTLAAAKGGFTTICAMP- 92 (428)
T ss_dssp EEEEEEEESSBEEECCSSCCC----TTSEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHHHHHHHHHHTEEEEEECS-
T ss_pred eeeeEEEECCEEEEecCCCCC----CCCeEEECCCCEEeeCEEEEeeccCCCCCCchhHHHHHHHHHHhCCeEEEEeCC-
Confidence 457999999999999986542 367899999999999999999999888777778899999999999999999998
Q ss_pred CCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCC-ccchHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHH
Q 013050 82 NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN-AYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGL 160 (450)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (450)
.+.+.......+....+.........+..++.+.... .+....+.++.+.|+.++.. .+.+..+.+.+++++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~G~~~~~~-------~~~~~~~~~~l~~~~ 165 (428)
T 3mpg_A 93 NTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAITVRQAGSEMTDFETLKELGAFAFTD-------DGVGVQDASMMLAAM 165 (428)
T ss_dssp CSSSCSCSHHHHHHHHHHHHHHCSSEEEECEESBGGGCSSSBCCHHHHHHTTCCCEEC-------TTSCCCCHHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHhcccCCcEEEEEeeEecCCCcchHHHHHHHHHhCCEEEEC-------CCcCCCCHHHHHHHH
Confidence 7777777777777777766655566666665554332 23455677888889887743 333467889999999
Q ss_pred HHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCC
Q 013050 161 SVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD 240 (450)
Q Consensus 161 ~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~ 240 (450)
+.|+++|+++.+|+++...+..... +.+......+....|...+...+.+.+.+++.. +.++|+.|+++
T Consensus 166 ~~a~~~g~~v~vH~~~~~~~~~~~~----~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~-------g~~~~i~H~s~ 234 (428)
T 3mpg_A 166 KRAAKLNMAVVAHCEENTLINKGCV----HEGKFSEKHGLNGIPSVCESVHIARDILLAEAA-------DCHYHVCHVST 234 (428)
T ss_dssp HHHHHTTCCEEECCCCGGGCTTCSE----ETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHH-------TCCEEECSCCC
T ss_pred HHHHhcCCeEEEECCChhHhhhHHh----hcCccchhhCcCCCCHHHHHHHHHHHHHHHHHh-------CCCEEEEeCCC
Confidence 9999999999999988765442222 222333344556788888999999999999977 89999999999
Q ss_pred hhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhh
Q 013050 241 ASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK 320 (450)
Q Consensus 241 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~ 320 (450)
. +.++.++++++.|+.+++++||+++.++.+.+...+..++++||++....+..+|+++.+|...+++||+.|++...+
T Consensus 235 ~-~~~~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~tDh~p~~~~~k 313 (428)
T 3mpg_A 235 K-GSVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHEALIEGLLDGTIDMIATDHAPHTAEEK 313 (428)
T ss_dssp H-HHHHHHHHHHHTTCCEEECBCHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHHTSSCCBCCCBCCCCTTGG
T ss_pred H-HHHHHHHHHHhcCCCEEEEEchHHhEECHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHhCCCCcEEEcCCCCCCHHHc
Confidence 8 999999999999999999999999999999888888899999999999999999999999999999999999987776
Q ss_pred cccCCCccccCCCCcchhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCC
Q 013050 321 LLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDN 399 (450)
Q Consensus 321 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~ 399 (450)
.. .|...+.|+.+.+..++.++... ...++|++++++++|.|||++||++ .|+|++|+.|||+|+|.+.++++..
T Consensus 314 ~~---~~~~~p~g~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~-~g~i~~G~~Ad~~~~d~~~~~~~~~ 389 (428)
T 3mpg_A 314 AQ---GIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFGLE-AGRLKEGRTADITIIDLEQEEEIDP 389 (428)
T ss_dssp GS---CTTTSCSCCCCTTTHHHHHHHHTTTTTSSCHHHHHHTTTHHHHHHHTCS-CSCCCTTSBCCEEEEESSCCEECCG
T ss_pred cc---CHhhCCCCceehhhHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCC-CccccCCCcCCEEEEcCCCCEEEch
Confidence 43 58899999999999999988764 4567999999999999999999996 9999999999999999998888877
Q ss_pred CCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCccc
Q 013050 400 DHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHA 439 (450)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 439 (450)
+ ++.+... ++||.+..+.++|..|||+|++||++|+++
T Consensus 390 ~-~~~~~~~-~~~~~g~~~~g~v~~t~v~G~~v~~~g~~~ 427 (428)
T 3mpg_A 390 T-TFLSKGK-NTPFAGWKCQGWPVMTIVGGKIAWQKESAL 427 (428)
T ss_dssp G-GCSSSCC-CCSCTTCEECCEEEEEEETTEEEEECSCC-
T ss_pred h-hccccCC-CCCcCCCEEeeEEEEEEECCEEEEeCCccc
Confidence 7 7777777 999999999999999999999999999875
No 7
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=100.00 E-value=4e-51 Score=403.24 Aligned_cols=429 Identities=25% Similarity=0.350 Sum_probs=336.4
Q ss_pred ceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCC--CCCcccchHHHHHHHHhCCceEEEeCC
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP--GRTEWEGFPSGTKAAAAGGITTLIDMP 80 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~--~~~~~~~~~~~~~~~~~~GvT~~~~~~ 80 (450)
+++|+|+||||++|++..+.+ .+.++||++|++|+|||||+|+|+..+ +....+++....+.++++|||++++++
T Consensus 17 ~~~v~I~~g~I~~ig~~~~~~---~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~ 93 (458)
T 1gkp_A 17 KADIYAEGETITRIGQNLEAP---PGTEVIDATGKYVFPGFIDPHVHIYLPFMATFAKDTHETGSKAALMGGTTTYIEMC 93 (458)
T ss_dssp ECEEEESSSBCCEEESCCCCC---TTCEEEECTTSEEEECEEEEEECSSCEETTEECSCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EeeEEEECCEEEEecCCCCCC---CCCeEEECCCCEEecCEEecccCCCcCCCCCcCHhHHHHHHHHHHhCCccEEEeCC
Confidence 578999999999999754321 356799999999999999999999765 222456788888888999999999986
Q ss_pred CCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHH
Q 013050 81 LNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGL 160 (450)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (450)
...+.....+.+....+.......++++.+......+.+..+.+.++.+.|+..++.++.+.+ ...++.+.+.+++
T Consensus 94 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~l~~~~ 169 (458)
T 1gkp_A 94 -CPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAVSKFDEKTEGQLREIVADGISSFKIFLSYKN---FFGVDDGEMYQTL 169 (458)
T ss_dssp -CCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECCCCCTTHHHHHHHHHHTTCCEEEEEECSTT---TTBCCHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHHhccCceeeEEEEEeecCCchhhHHHHHHHHHhCCCEEEEEeccCC---CcCCCHHHHHHHH
Confidence 443434445555555444444556666666544444445577888888899999988776532 2357889999999
Q ss_pred HHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCC
Q 013050 161 SVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD 240 (450)
Q Consensus 161 ~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~ 240 (450)
+.|+++++++.+|+++...+....... ...+......+....|...+.+.+.+++.++... +.++|+.|+++
T Consensus 170 ~~a~~~~~~v~~H~e~~~~~~~~~~~~-~~~G~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-------g~~~~~~H~~~ 241 (458)
T 1gkp_A 170 RLAKELGVIVTAHCENAELVGRLQQKL-LSEGKTGPEWHEPSRPEAVEAEGTARFATFLETT-------GATGYVVHLSC 241 (458)
T ss_dssp HHHHHHTCEEEEEESCHHHHHHHHHHH-HHTTCCSGGGTTTTSCHHHHHHHHHHHHHHHHHH-------TCEEEECSCCS
T ss_pred HHHHhcCCEEEEEcCCHHHHHHHHHHH-HhcCCCChhhccCcCCHHHHHHHHHHHHHHHHHh-------CCCEEEEeCCC
Confidence 999999999999998766544322110 0112222223344677777888888999888877 89999999998
Q ss_pred hhHHHHHHHHHHhCCCcEEEecCcchhcccccccCC---CCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCCh
Q 013050 241 ASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVP 317 (450)
Q Consensus 241 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~ 317 (450)
. +.++.++.+++.|..+++++||+++.++...+.. .+..+.+.|+++....++.++++++.|+.++++||+.|++.
T Consensus 242 ~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~p~r~~~~~~~l~~~~~~G~~~~~gtD~~~~~~ 320 (458)
T 1gkp_A 242 K-PALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGVEAMKYIMSPPLRDKRNQKVLWDALAQGFIDTVGTDHCPFDT 320 (458)
T ss_dssp H-HHHHHHHHHHHTTCCEEEEEEHHHHHCCGGGGGSCHHHHHTTCCSSCCCCTHHHHHHHHHHHTTSSCEEECCBCCCCH
T ss_pred H-HHHHHHHHHHHcCCeEEEEecccceeeCHHHhcccccCCcceEEeCCCCCHHHHHHHHHHHhcCCeeEEECCCCCCCH
Confidence 7 8889999999999999989999988887655422 12234457889888889999999999999999999999887
Q ss_pred hhhcccCCCccccCCCCcchhhHHHHHHHHHHhcC-CCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCce
Q 013050 318 ELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEF 395 (450)
Q Consensus 318 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g-ls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~ 395 (450)
..+....+.|+..+.|+.+.+..++.+++...+.+ +|++++++++|.|||++||+ +++|+|++|++|||||+|.+..+
T Consensus 321 ~~k~~~~~~~~~~~~g~~g~~~~l~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~ 400 (458)
T 1gkp_A 321 EQKLLGKEAFTAIPNGIPAIEDRVNLLYTYGVSRGRLDIHRFVDAASTKAAKLFGLFPRKGTIAVGSDADLVVYDPQYRG 400 (458)
T ss_dssp HHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTSSSCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEETTCCE
T ss_pred HHhhcccCChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhCHHHHhCCCCCCCcCCCCCcCCEEEEeCCCCe
Confidence 65554445788888899999988888877665554 99999999999999999999 78999999999999999999988
Q ss_pred eeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCcccCCCC-Cccccc
Q 013050 396 ELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAAC-GSPILA 449 (450)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~-g~~~~~ 449 (450)
+++.. ++.+... ++||.+....++|..|||+|++||++|+++++.. ||+|++
T Consensus 401 ~~~~~-~~~~~~~-~~p~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~ 453 (458)
T 1gkp_A 401 TISVK-TQHVNND-YNGFEGFEIDGRPSVVTVRGKVAVRDGQFVGEKGWGKLLRR 453 (458)
T ss_dssp ECCGG-GCCSSSS-CCTTTTCEESCEEEEEEETTEEEEETTEECCCTTCCCBCCC
T ss_pred EEchH-HcccccC-CCccCCCEEeeEEEEEEECCEEEEECCeeccCCCCceeccC
Confidence 88766 6666666 8999999999999999999999999999998754 999986
No 8
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=100.00 E-value=1.2e-51 Score=412.31 Aligned_cols=425 Identities=25% Similarity=0.379 Sum_probs=335.8
Q ss_pred ceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCC---CCcccchHHHHHHHHhCCceEEEeC
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG---RTEWEGFPSGTKAAAAGGITTLIDM 79 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~---~~~~~~~~~~~~~~~~~GvT~~~~~ 79 (450)
+++|+|+||+|++|++..+.+ .+.++||+.|++|+|||||+|+|+..+. ....+++....+.++++||||++++
T Consensus 20 ~~~v~I~~g~I~~Ig~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~e~~~~~~~~~l~~GvTtv~d~ 96 (559)
T 2fty_A 20 AAEIAVNNGKVQLIAASIDPS---LGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAF 96 (559)
T ss_dssp ECEEEEETTEEEEEESCCCGG---GEEEEEECTTCEEEECEEECCBCCCCTTCTTSCCSCCHHHHHHHHHHTTEEEEEEE
T ss_pred eeeEEEECCEEEEecCCCCCC---CCCeEEeCCCCEEEcCEEeeccCcCccccccCCCHHHHHHHHHHHHhCcEEEEEEC
Confidence 578999999999999754311 2457999999999999999999998762 3356778888999999999999999
Q ss_pred CCCCC---CCCC-cHHHHHHHHHHHhc-CCceEEEEeccccCC---Ccc---ch-HHHHHHH-HcCCcEEEEecccCCCC
Q 013050 80 PLNSD---PSTI-STETLKLKVDAAEK-RIYVDVGFWGGLVPE---NAY---NA-SALEALL-NAGVLGLKSFMCPSGIN 146 (450)
Q Consensus 80 ~~~~~---~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~---~~-~~~~~~~-~~g~~~~~~~~~~~~~~ 146 (450)
+ +.. +... ..+.+....+.... ...+++.++...... ..+ .+ +.+.+++ +.|+.+++.++.+.+
T Consensus 97 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~l~~~~~~l~~~~G~~~iki~~~~~~-- 173 (559)
T 2fty_A 97 S-TQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGVSSVKMFMTYPG-- 173 (559)
T ss_dssp E-ECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHCCCEEEEESSSTT--
T ss_pred c-CcccCCcchHHHHHHHHHHHHHHHhhcceeEEEeeeeeccCcCCCchhhhhHHHHHHHHHHHCCCCEEEEEecCCC--
Confidence 7 433 2222 22222000022222 345677666544333 222 34 5677777 679999999876642
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhh---hhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhc
Q 013050 147 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERH---VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTR 223 (450)
Q Consensus 147 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~ 223 (450)
..++.+.++++++.|+++|+++.+|+++...+... +...| ......+....|...+.+.+.+++.+++..
T Consensus 174 --~~~s~e~l~~~~~~A~~~g~~v~~H~e~~~~i~~~~~~~~~~G----~~~~~~~~~~~p~~~E~~av~~~i~la~~~- 246 (559)
T 2fty_A 174 --LQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQG----LTDAYYHGVSRPSIVEGEATNRAITLATTM- 246 (559)
T ss_dssp --TBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTT----CCSTTHHHHTSCHHHHHHHHHHHHHHHHHT-
T ss_pred --CcCCHHHHHHHHHHHHhCCCEEEEECCChHHHHHHHHHHHhcC----CCChhhcccCCCHHHHHHHHHHHHHHHHHh-
Confidence 36789999999999999999999999887665432 22222 222223445788888999999999999976
Q ss_pred cCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhccccccc-----------------------------
Q 013050 224 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEI----------------------------- 274 (450)
Q Consensus 224 ~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----------------------------- 274 (450)
+.++|++|+++. +.++.++++++.|+.+++++||+++.++.+.+
T Consensus 247 ------g~~vhi~H~s~~-~~~~~i~~ak~~G~~Vt~e~~p~~l~l~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~ 319 (559)
T 2fty_A 247 ------DTPILFVHVSSP-QAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPD 319 (559)
T ss_dssp ------TCCEEECSCCCH-HHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGSCC--------CCSCCGGGCSSSTTTCTT
T ss_pred ------CCCEEEEcCCCH-HHHHHHHHHHHcCCceEEeecCcccccCHHHhhccccccccccccccCccccccccccccC
Confidence 899999999987 88999999999999999999999998876555
Q ss_pred CC-CCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhh-------------cccCCCccccCCCCcchhhH
Q 013050 275 PD-GDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK-------------LLDEGNFLKAWGGISSLQFV 340 (450)
Q Consensus 275 ~~-~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~-------------~~~~~~~~~~~~g~~~~~~~ 340 (450)
.. .+..++++||++....+..++++++.|+.++++||+.|++...+ ....++|...+.|+.+++..
T Consensus 320 ~~~~~~~~~~~PplR~~~~~~~l~~~l~~G~~~~igTD~~p~~~~~k~~~~~k~~~~~~~~~~~~~f~~~~~G~~g~e~~ 399 (559)
T 2fty_A 320 DRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTR 399 (559)
T ss_dssp CTTGGGGGCCSSCCCCTTSHHHHHHHHHTTSCSEECCCBCCCBSSCCSSTTBGGGGEEGGGTEESCGGGSCCCBCCTTTH
T ss_pred ccccccCcEECCCCCCHHHHHHHHHHHhcCceEEEEeCCCCCChhhccccccccccccccccccCCHhhCCCCCccHHHH
Confidence 11 24557889999998899999999999999999999998876532 12246899999999999999
Q ss_pred HHHHHHHHH-hcCC-CHHHHHHHHhhchhHHhCC-CCCCccccC-CCccEEEEeCCC--------ceeeCCCCCcccCCC
Q 013050 341 LPVTWSYGR-KYGV-TLEQLASWWSERPAKLAGQ-VSKGAIAIG-NHADLVVWEPEA--------EFELDNDHPVHMKHP 408 (450)
Q Consensus 341 ~~~~~~~~~-~~gl-s~~~al~~aT~~~A~~lg~-~~~G~I~~G-~~ADlvv~d~~~--------~~~~~~~~~~~~~~~ 408 (450)
++.++.... ..++ |++++++++|.|||++||+ ++.|+|++| +.|||||||.+. ++++... ++.+...
T Consensus 400 l~~ll~~~v~~~~l~~~~~~~~~~t~~~A~~lgl~~~~G~i~~G~~~ADlvv~d~~~~~~~~~~~~~~~~~~-~~~s~~~ 478 (559)
T 2fty_A 400 MPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSKPKLITNK-LMEHNCD 478 (559)
T ss_dssp HHHHHHHTTTTTSSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTTSBCCEEEECCSSCCCCCTTSCSBCCTG-GGTSSCS
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHhHHHHHHhCCCCCCceeeccCCcCCEEEEeCcccccccCCccEEEchH-HhcccCC
Confidence 998887654 4469 9999999999999999999 789999999 999999999997 7888777 7888888
Q ss_pred CccccCCceEeeEEEEEEECCeEEEecCcccCC-CCCccccc
Q 013050 409 SISAYLGRRLSGKVLATISRGNLVYKEGNHAPA-ACGSPILA 449 (450)
Q Consensus 409 ~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~-~~g~~~~~ 449 (450)
++||.|..+.++|..|||+|++||++|+++++ ..||+|++
T Consensus 479 -~sp~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~~~G~~~~~ 519 (559)
T 2fty_A 479 -YTPFEGIEIKNWPRYTIVKGKIVYKEGEILKENADGKYLKR 519 (559)
T ss_dssp -CCTTTTCBCSCCEEEEEETTEEEEETTEECGGGCCCCBCCC
T ss_pred -CCCccCCEecceEEEEEECCEEEEECCeeccCCcCCeeecC
Confidence 99999999999999999999999999999977 56999986
No 9
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=5.9e-50 Score=394.92 Aligned_cols=426 Identities=29% Similarity=0.465 Sum_probs=331.3
Q ss_pred ceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCC-CCcccchHHHHHHHHhCCceEEEeCCC
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG-RTEWEGFPSGTKAAAAGGITTLIDMPL 81 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~-~~~~~~~~~~~~~~~~~GvT~~~~~~~ 81 (450)
+++|+|+||+|++|++..+.+ .+.++||++|++|+|||||+|+|+..+. +...+++....+.++++|||+++++++
T Consensus 19 ~~~v~I~~g~I~~ig~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~ 95 (458)
T 1gkr_A 19 EADILVKDGKVAAISADTSDV---EASRTIDAGGKFVMPGVVDEHVHIIDMDLKNRYGRFELDSESAAVGGITTIIEMPI 95 (458)
T ss_dssp EEEEEEETTEEEEEESCCTTC---CEEEEEECTTCEEEECEEEEEEECCCGGGTTTSCCHHHHHHHHHHHTEEEEEECSC
T ss_pred eeeEEEECCEEEEecCCCCCC---CCCeEEeCCCCEEecCEEEeeecccCCCCCCchhHHHHHHHHHHcCCEEEEEeCCC
Confidence 578999999999999754211 2457999999999999999999998755 445567888888999999999999862
Q ss_pred CCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHH
Q 013050 82 NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLS 161 (450)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (450)
+..+.....+.+....+...... +++..+.+... ...+.+.++.+.|+.+++.++.+......+..+.+.++++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~l~~~~~ 171 (458)
T 1gkr_A 96 TFPPTTTLDAFLEKKKQAGQRLK-VDFALYGGGVP---GNLPEIRKMHDAGAVGFKSMMAASVPGMFDAVSDGELFEIFQ 171 (458)
T ss_dssp SSSCSCSHHHHHHHHHHHHHHCS-SEEEEEEECCT---TCHHHHHHHHHTTCCEEEEESSCSBTTTBCBCCHHHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHhhhCc-eeEEEEeccCC---CCHHHHHHHHHcCCcEEEEeecccCCCCcccCCHHHHHHHHH
Confidence 33444455666666655555444 56665544332 235677888888999999887654212234678999999999
Q ss_pred HHHhcCCcEEEecCChhhhhhh---hhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEec
Q 013050 162 VLARYKRPLLVHAEMEKGSERH---VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHL 238 (450)
Q Consensus 162 ~a~~~g~~v~~H~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~ 238 (450)
.|+++++++.+|++....+... +...+ ......+....|..++.+.+.+++.++.+. +.++|++|+
T Consensus 172 ~a~~~g~~v~~H~~~~~~~~~~~~~~~~~G----~~~~~~h~~~~~~~~~~~~~~~~~~la~~~-------g~~~h~~H~ 240 (458)
T 1gkr_A 172 EIAACGSVIVVHAENETIIQALQKQIKAAG----GKDMAAYEASQPVFQENEAIQRALLLQKEA-------GCRLIVLHV 240 (458)
T ss_dssp HHHHHTCEEEEECCCHHHHHHHHHHHHHTT----CCSHHHHHHHSCHHHHHHHHHHHHHHHHHH-------CCEEEECCC
T ss_pred HHHHcCCEEEEECCCHHHHHHHHHHHhhcC----ccchhhccccCCHHHHHHHHHHHHHHHHHh-------CCCEEEEeC
Confidence 9999999999999876654322 12222 111122233356667777888988898876 889999999
Q ss_pred CChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChh
Q 013050 239 SDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPE 318 (450)
Q Consensus 239 ~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~ 318 (450)
++. ..++.+.++++.|+.++++++|+++.++...+...+...+..|+++....+..++++++.|+.+++|||+.+++..
T Consensus 241 ~~~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~l~~~~~~G~~~~lgtD~~~~~~~ 319 (458)
T 1gkr_A 241 SNP-DGVELIHQAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPPVRSAEMNIRLWEQLENGLIDTLGSDHGGHPVE 319 (458)
T ss_dssp CSH-HHHHHHHHHHHTTCCEEEEECHHHHSCCGGGHHHHGGGGCCSSCCCCHHHHHHHHHHHHHTCCCEECCCEECCCGG
T ss_pred CCH-HHHHHHHHHHHCCCcEEEEEchHHheeCHHHhhccCceEEEcCCCCCHHHHHHHHHHHhCCCceEEEeCCCCCChH
Confidence 987 7888888888888889999999998877665443345567788899888899999999999999999999887765
Q ss_pred hhcccCCCccccCCCCcchhhHHHHHHHHHH-hcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCcee
Q 013050 319 LKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFE 396 (450)
Q Consensus 319 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~ 396 (450)
.+.....+++..+.|+.+.+..++..+.... ..++|++++++++|.|||++||+ +++|+|++||+|||||+|.+.+++
T Consensus 320 ~k~~g~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~ 399 (458)
T 1gkr_A 320 DKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRLSLERLVEVMCEKPAKLFGIYPQKGTLQVGSDADLLILDLDIDTK 399 (458)
T ss_dssp GTGGGGTCGGGSCCCBCCTTTHHHHHHHHTGGGTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEEESCCCEE
T ss_pred HhccccCCHhHCCCCcccHHHHHHHHHHHHHHhCCCCHHHHHHHHhhhHHHHhCCCCCCccCCCCCcCCEEEEcCCcceE
Confidence 4432224677777888888887877766444 44799999999999999999999 689999999999999999998887
Q ss_pred eCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCcccCCCC-Cccccc
Q 013050 397 LDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAAC-GSPILA 449 (450)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~-g~~~~~ 449 (450)
++.. ++.+... ++||.|..+.++|..|||+|++||++|+++++.. |++|++
T Consensus 400 ~~~~-~~~~~~~-~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~ 451 (458)
T 1gkr_A 400 VDAS-QFRSLHK-YSPFDGMPVTGAPVLTMVRGTVVAEKGEVLVEQGFGQFVTR 451 (458)
T ss_dssp CCGG-GCSSSCC-CCTTTTCEECCEEEEEEETTEEEEETTEECSCTTCCCBCCC
T ss_pred EcHH-HccccCC-CCCcCCCEeeeEEEEEEECCEEEEECCccccCCCCCeecCC
Confidence 7766 6777777 8999999888999999999999999999998766 999986
No 10
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=1e-49 Score=393.05 Aligned_cols=427 Identities=26% Similarity=0.394 Sum_probs=332.9
Q ss_pred ceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCC-CCCC-cccchHHHHHHHHhCCceEEEeCC
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDD-PGRT-EWEGFPSGTKAAAAGGITTLIDMP 80 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~-~~~~-~~~~~~~~~~~~~~~GvT~~~~~~ 80 (450)
+++|+|+||||++|++..+ .+.++||++|++|+|||||+|+|+.. +... ..+++....+.++++||||+++++
T Consensus 18 ~~~v~I~~g~I~~ig~~~~-----~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~~~~~~GvTtv~~~~ 92 (457)
T 1nfg_A 18 RADLGIKDGKITQIGGALG-----PAERTIDAAGRYVFPGGIDVHTHVETVSFNTQSADTFATATVAAACGGTTTIVDFC 92 (457)
T ss_dssp EEEEEEETTEEEEESSCCC-----CCSEEEECTTCEEEECEEEEEECCSCEETTEECSCCHHHHHHHHHHTTEEEEEEEE
T ss_pred eeeEEEECCEEEEecCCCC-----CCCeEEeCCCCEEccceEeeccccccCcCCCCChhhHHHHHHHHHhCCcEEEEeCC
Confidence 5789999999999987532 25689999999999999999999973 3222 456788888999999999999997
Q ss_pred CCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHH
Q 013050 81 LNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGL 160 (450)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (450)
...+.....+.+....+.......++++.+......+.+..+.+.++.+.|+.+++.++.+.. ....+.+.+.+++
T Consensus 93 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~k~~~~~~~---~~~~~~~~~~~~~ 168 (457)
T 1nfg_A 93 -QQDRGHSLAEAVAKWDGMAGGKSAIDYGYHIIVLDPTDSVIEELEVLPDLGITSFKVFMAYRG---MNMIDDVTLLKTL 168 (457)
T ss_dssp -ECCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSSCCHHHHHHTTTGGGGTCCEEEEESSSTT---TTBCCHHHHHHHH
T ss_pred -CCCCCCChHHHHHHHHHHhcccCccCEEEEEeecCCchhHHHHHHHHHHcCCCEEEEeeccCC---CCCCCHHHHHHHH
Confidence 444555556666666555555556677776655544444444566666789999999876542 1235678888999
Q ss_pred HHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCC
Q 013050 161 SVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD 240 (450)
Q Consensus 161 ~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~ 240 (450)
+.+++.++++.+|++....+...+.... ..+......+....|..++.+.+.++++++++. +.++|++|+++
T Consensus 169 ~~a~~~~~~v~~H~e~~~~~~~~~~~~~-~~g~~~~~~h~~~~~~~~~~~~~~~~~~~a~~~-------g~~~~~~H~~~ 240 (457)
T 1nfg_A 169 DKAVKTGSLVMVHAENGDAADYLRDKFV-AEGKTAPIYHALSRPPRVEAEATARALALAEIV-------NAPIYIVHVTC 240 (457)
T ss_dssp HHHHHHTCEEEEECCCHHHHHHHHHHHH-HTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHH-------TCCEEECCCCS
T ss_pred HHHHhcCCEEEEeCCCHHHHHHHHHHHH-hcCCcchhhccccCCHHHHHHHHHHHHHHHHHH-------CCCEEEEeCCc
Confidence 9999999999999987765543322100 111111122333567788888999999999987 99999999997
Q ss_pred hhHHHHHHHHHHhCCCcEEEecCcchhcccccccCC---CCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCCh
Q 013050 241 ASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVP 317 (450)
Q Consensus 241 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~ 317 (450)
. ..++.++++++.|..++++++++++.++.+.+.. .+..+..+|+++.......++++++.|+.+++|||+.+++.
T Consensus 241 ~-~~~~~~~~~~~~G~~v~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~G~~~~~gtD~~~~~~ 319 (457)
T 1nfg_A 241 E-ESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDFEGAKYVFTPPARAKKDHDVLWNALRNGVFETVSSDHCSWLF 319 (457)
T ss_dssp H-HHHHHHHHHHHHTCCEEECEEGGGGTCCGGGGGCTTTGGGGGCCSSCCCCHHHHHHHHHHHHTTCCSCEECCBCCCCT
T ss_pred H-HHHHHHHHHHHcCCeEEEEEchHHhEeCHHHhccccccCceeEEcCCCCCHHHHHHHHHHHhCCCeEEEecCCCCCCh
Confidence 6 7788888888888888999999998888766543 45667788888888888899999999999999999987764
Q ss_pred h-hhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCce
Q 013050 318 E-LKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEF 395 (450)
Q Consensus 318 ~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~ 395 (450)
. .+....++|+..+.|+.+.+..++..+......++|++++++++|.|||++||+ +++|+|++||+|||||+|.+..+
T Consensus 320 ~~~k~~~~~~~~~~~~g~~g~e~~~~~~~~~~~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~ 399 (457)
T 1nfg_A 320 KGHKDRGRNDFRAIPNGAPGVEERLMMVYQGVNEGRISLTQFVELVATRPAKVFGMFPQKGTIAVGSDADIVLWDPEAEM 399 (457)
T ss_dssp TTTTTTTTTCGGGSCCCBCCTTTHHHHHHHHHHTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCSTTSBCCEEEEEEEEEE
T ss_pred HHhhhcccCCHhHCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHHhhhHHHHhCCCCCCcCcCCCCccCEEEEeCCCCE
Confidence 4 222222567777888888888888777545556799999999999999999999 57999999999999999999877
Q ss_pred eeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCcccCCCC-Cccccc
Q 013050 396 ELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAAC-GSPILA 449 (450)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~-g~~~~~ 449 (450)
+++.. ++.+... ++||.|....++|..|||+|++||++|+++.... ||+|++
T Consensus 400 ~~~~~-~~~~~~~-~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~ 452 (457)
T 1nfg_A 400 VIEQT-AMHNAMD-YSSYEGHKVKGVPKTVLLRGKVIVDEGSYVGEPTDGKFLKR 452 (457)
T ss_dssp ECCGG-GSCSSCS-CCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTSCCBCCC
T ss_pred EecHH-HccCCCC-CCCccCCEecceEEEEEECCEEEEECCccccCCCCCeeeCC
Confidence 77766 6777777 8999999999999999999999999999997755 999976
No 11
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=1e-48 Score=390.20 Aligned_cols=427 Identities=22% Similarity=0.291 Sum_probs=332.3
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCC--CcccchHHHHHHHHhCCceEEEeC
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGFPSGTKAAAAGGITTLIDM 79 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~--~~~~~~~~~~~~~~~~GvT~~~~~ 79 (450)
.+++|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+..+.. ...+++....+.++++|||+++++
T Consensus 24 ~~~~V~I~dG~I~~Ig~~~~~~---~~~~vIDa~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~~a~~~G~Ttv~d~ 100 (521)
T 2ftw_A 24 FKSDVLVENGIIKEISKNIEPK---EGIKVVDATDKLLLPGGIDTHTHFQLPFMGTVSVDDFDIGTQAAVAGGTTFIIDF 100 (521)
T ss_dssp EECEEEEETTEEEEEESCCCCC---SSCCEEECTTCEEEECEEEEEECTTCEETTEECSSCHHHHHHHHHHTTEEEEEEE
T ss_pred eeeeEEEECCEEEEecCCCCCC---CCCeEEECCCCEEecCEEeeecccCcCCCCccCHHHHHHHHHHHHhCCcceecCc
Confidence 3579999999999999764322 25689999999999999999999976532 244678888999999999999997
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHH-HcCCcEEEEecccCCCCCCCCCCHHHHHH
Q 013050 80 PLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKE 158 (450)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (450)
+ ...+.....+.+............+.++++......+....+++.++. +.|+..++.++.+.+ ...++.+++++
T Consensus 101 ~-~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~~l~~l~~~~G~~~~k~~~~~~~---~~~~~~e~l~~ 176 (521)
T 2ftw_A 101 V-IPTRGQSLLEAYDQWKKWADEKVNCDYSLHVAITWWSEQVSREMEILVKERGVNSFKCFMAYKN---SFMVTDQEMYH 176 (521)
T ss_dssp E-CCCTTCCHHHHHHHHHHHHHTTCSSEEEEEEECCSCCHHHHHHHHHHHHHSCCCEEEEESSCTT---TTBCCHHHHHH
T ss_pred C-CCCCCcCHHHHHHHHHHHhhcCceeeEeeEEeecCCChhHHHHHHHHHHhCCCCEEEEEeccCC---CcCCCHHHHHH
Confidence 5 222223334455554444444455667666554444444456677777 479999998876532 13578999999
Q ss_pred HHHHHHhcCCcEEEecCChhhhhhh---hhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEE
Q 013050 159 GLSVLARYKRPLLVHAEMEKGSERH---VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHI 235 (450)
Q Consensus 159 ~~~~a~~~g~~v~~H~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (450)
+++.|+++|+++.+|+++...+... +...|... ...+....|...+...+.+.+.++... +.++|+
T Consensus 177 ~~~~A~~~g~~v~vH~e~~~~~~~~~~~l~~~G~~~----~~~h~~~~~~~~e~~a~~~~~~la~~~-------~~p~hi 245 (521)
T 2ftw_A 177 IFKRCKELGAIAQVHAENGDMVFEGQKKMLEMGITG----PEGHELSRPEALEAEATNRAIVIADSV-------CTPVYI 245 (521)
T ss_dssp HHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCS----THHHHHHSCTHHHHHHHHHHHHHHHHH-------TCCEEE
T ss_pred HHHHHHHcCCEEEEEcCCHHHHHHHHHHHHHcCCCC----hhhccccCcHHHHHHHHHHHHHHHHHh-------CCCEEE
Confidence 9999999999999999876533221 22222111 111223356666666777778888766 889999
Q ss_pred EecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCC----CCCceEEcCCCCC-hhhHHHHHHHHhcCCeeEEcC
Q 013050 236 VHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD----GDTRFKCAPPIRD-AANKEKLWEALMDGHIDMLSS 310 (450)
Q Consensus 236 ~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~l~~~~~~g~~~~~gt 310 (450)
.|+++. ...+.++++++.|+.++++.+++++.++...+.. .+..+.++||++. ...++.+|+++..|...+++|
T Consensus 246 ~h~ss~-~~~~~i~~~r~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~g~~~~~gs 324 (521)
T 2ftw_A 246 VHVQSI-GAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGT 324 (521)
T ss_dssp CSCCCH-HHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSSHHHHHTTCCSSCCCCCTTHHHHHHHHHHHTSSCCCBC
T ss_pred EecCcH-HHHHHHHHHHHcCCeEEEEEcchhhccCHHHhcCCCcccCcceEEcCCCCCChhhHHHHHHHhcCCCEEEEEe
Confidence 999987 8899999999999999999999998887765432 1223567899987 678889999999999999999
Q ss_pred CCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHh-cCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEE
Q 013050 311 DHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK-YGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVV 388 (450)
Q Consensus 311 D~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv 388 (450)
|+.|+....+....+.|...+.|+.+.+..++.++....+ .++|++++++++|.|||+++|+ +++|+|++|+.|||||
T Consensus 325 D~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~i~~G~~ADlvv 404 (521)
T 2ftw_A 325 DNCTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVWENGVNTGKLTWCQFVRATSSERARIFNIYPRKGRIDVGCDGDIVI 404 (521)
T ss_dssp CBCCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEE
T ss_pred CCCCCCHHHhhcccCChhhCCCCCccHHHHHHHHHHHHHhcCCCCHHHHHHHhChhHHHHhCCCCCCCCcCCCCcCCEEE
Confidence 9999887666655567888899999999999888876554 5799999999999999999999 6799999999999999
Q ss_pred EeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCccc-CCCCCccccc
Q 013050 389 WEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHA-PAACGSPILA 449 (450)
Q Consensus 389 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~-~~~~g~~~~~ 449 (450)
||.+..+++... .+.+... ++||++....+.|..||++|++||++|+++ .+..||+|++
T Consensus 405 ~d~~~~~~i~~~-~~~~~~~-~~p~~g~~~~g~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~ 464 (521)
T 2ftw_A 405 WDPNQSKTISKD-THHHAVD-FNIFEGIKVTGIAVTTIVAGNIVWSDNKLSCVKGSGRFVPR 464 (521)
T ss_dssp EEEEEEEECCTT-TCCCSSS-CCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCC
T ss_pred EeCCCCEEEChH-HccccCC-CCCcCCCEeeeeEEEEEECCEEEEECCeecccCcCceEecC
Confidence 999988888777 7777777 999999999999999999999999999999 4577999986
No 12
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=100.00 E-value=6.9e-48 Score=383.78 Aligned_cols=430 Identities=23% Similarity=0.276 Sum_probs=325.4
Q ss_pred ceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCC--CcccchHHHHHHHHhCCceEEEeCC
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGFPSGTKAAAAGGITTLIDMP 80 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~--~~~~~~~~~~~~~~~~GvT~~~~~~ 80 (450)
+++|+|+||||++|++..+.+ .+.++||++|++|+|||||+|+|+..+.+ ...+++....+.++++|||++++++
T Consensus 43 ~~~V~I~~grI~~Ig~~~~~~---~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~~~l~~GvTtv~d~~ 119 (501)
T 2vm8_A 43 YADIYMEDGLIKQIGENLIVP---GGVKTIEAHSRMVIPGGIDVHTRFQMPDQGMTSADDFFQGTKAALAGGTTMIIDHV 119 (501)
T ss_dssp EEEEEEETTEEEEEESSCCCC---SSSCEEECTTCEEEECEEEEEECTTCEETTEECSSCHHHHHHHHHHTTEEEEEEEE
T ss_pred EeeEEEECCEEEEeccCCCCC---CCCeEEECCCCEEeeCEEEeeecccccccCCCcHHHHHHHHHHHHhCCcEEEEeCC
Confidence 579999999999999764321 35689999999999999999999976532 2356788888999999999999986
Q ss_pred CCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHH-HcCCcEEEEecccCCCCCCCCCCHHHHHHH
Q 013050 81 LNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEG 159 (450)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (450)
...+.......+....+.........++.+......+....+++.++. +.|+.+++.++.+.. ....+.+.++++
T Consensus 120 -~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~l~~~~G~~~i~~~~~~~~---~~~~~~~~l~~~ 195 (501)
T 2vm8_A 120 -VPEPGTSLLAAFDQWREWADSKSCCDYSLHVDISEWHKGIQEEMEALVKDHGVNSFLVYMAFKD---RFQLTDCQIYEV 195 (501)
T ss_dssp -CCCTTSCHHHHHHHHHHHHHHHCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESSSTT---TTBCCHHHHHHH
T ss_pred -CCCCCCChHHHHHHHHHHHhcCCeeEEEEEEEecCCCcccHHHHHHHHHhCCceEEEEeeccCC---CCCCCHHHHHHH
Confidence 444434434445444443333234455555433333333455666666 479999998875532 135788999999
Q ss_pred HHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecC
Q 013050 160 LSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS 239 (450)
Q Consensus 160 ~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~ 239 (450)
++.|+++++++.+|+++...+...+..-. ..+......+....|...+...+.+...+++.. +.++|+.|++
T Consensus 196 ~~~A~~~g~~v~~H~e~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~-------g~~~hi~h~~ 267 (501)
T 2vm8_A 196 LSVIRDIGAIAQVHAENGDIIAEEQQRIL-DLGITGPEGHVLSRPEEVEAEAVNRAITIANQT-------NCPLYITKVM 267 (501)
T ss_dssp HHHHHHHTCEEEEECCCHHHHHHHHHHHH-TTTCCSTHHHHHHSCHHHHHHHHHHHHHHHHHH-------TCCEEEEEEC
T ss_pred HHHHHHhCCEEEEEccChHHHHHHHHHHH-hcCCCChhhccccCCHHHHHHHHHHHHHHHHHh-------CCcEEEEeCC
Confidence 99999999999999987643222211000 111111122333456667777888888888876 8899999999
Q ss_pred ChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCC----CCceEEcCCCCCh-hhHHHHHHHHhcCCeeEEcCCCCC
Q 013050 240 DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG----DTRFKCAPPIRDA-ANKEKLWEALMDGHIDMLSSDHSP 314 (450)
Q Consensus 240 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~l~~~~~~g~~~~~gtD~~~ 314 (450)
+. ..++.++++++.|+.++++.+++++.++...+... +..+++.||++.. .....+++++..|+.+++|||+.|
T Consensus 268 ~~-~~~~~i~~~~~~G~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~~l~~~l~~G~~~~~gtD~~~ 346 (501)
T 2vm8_A 268 SK-SSAEVIAQARKKGTVVYGEPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCT 346 (501)
T ss_dssp CH-HHHHHHHHHHHTTCCEEEEEBHHHHHCCGGGGGCSSHHHHHHTCCSSCCCSCTTHHHHHHHHHHHTSSCCCBCCBCC
T ss_pred cH-HHHHHHHHHHhCCCcEEEEEChhHhhcChhhhcccccccCceEEECCCCCCCcchHHHHHHHHhcCceEEEEecCCC
Confidence 87 78999999999998888888888887766544321 1124466888764 467888999999999999999988
Q ss_pred CChhhhcccCCCccccCCCCcchhhHHHHHHHHHHh-cCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCC
Q 013050 315 TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK-YGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPE 392 (450)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~ 392 (450)
++...++...+.|...+.|+.+.+..+..++....+ .++|++++++++|.|||+++|+ +++|+|++|+.|||||+|.+
T Consensus 347 ~~~~~~~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~ 426 (501)
T 2vm8_A 347 FNTAQKAVGKDNFTLIPEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKVFNLYPRKGRIAVGSDADLVIWDPD 426 (501)
T ss_dssp CCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHHTCTTTSSCCCTTSBCCEEEEEEE
T ss_pred CChhhhhcccCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHhHHHHhCCCCCCCccCCCCcCCEEEEcCC
Confidence 887766665566777788888888888877766554 4799999999999999999999 67999999999999999999
Q ss_pred CceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCccc-CCCCCcccccC
Q 013050 393 AEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHA-PAACGSPILAT 450 (450)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~-~~~~g~~~~~~ 450 (450)
+.+++... ++.++.. ++||.+....++|..||++|++||++|+++ ++..||+|++.
T Consensus 427 ~~~~~~~~-~~~s~~~-~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~l~~~ 483 (501)
T 2vm8_A 427 SVKTISAK-THNSSLE-YNIFEGMECRGSPLVVISQGKIVLEDGTLHVTEGSGRYIPRK 483 (501)
T ss_dssp EEEECCTT-TSSSSCS-CCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCCC
T ss_pred CCeeeccc-ccccccc-CCCccCcEeCceEEEEEECCEEEEECCeEccCCCCCceecCC
Confidence 88888776 6777777 899999998899999999999999999999 55779999863
No 13
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-47 Score=384.34 Aligned_cols=429 Identities=23% Similarity=0.284 Sum_probs=328.0
Q ss_pred ceeEEEeCCEEEEeccCCCCCCC-CCCCcEEecCCCEEeccceeeccccCCCCC--CcccchHHHHHHHHhCCceEEEeC
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRN-SKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGFPSGTKAAAAGGITTLIDM 79 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~-~~~~~viD~~g~~v~PG~iD~H~H~~~~~~--~~~~~~~~~~~~~~~~GvT~~~~~ 79 (450)
+++|+|+||+|++|++..+.+.. +...++||++|++|+|||||+|+|+..+.. ...+++....+.++++|||+++++
T Consensus 44 ~~dV~I~dGrI~~Ig~~~~~~~~~~~~~~vIDa~G~~V~PG~ID~H~Hl~~~~~~~~~~e~~~~~~~~al~~GvTtv~d~ 123 (541)
T 2vr2_A 44 VADVLVEDGVVRALGHDLLPPGGAPAGLRVLDAAGKLVLPGGIDTHTHMQFPFMGSRSIDDFHQGTKAALSGGTTMIIDF 123 (541)
T ss_dssp ECEEEEETTEEEEEEC-----------CEEEECTTSEEEECEEEEEECTTCBCSSSBCSCCTTHHHHHHHTTTEEEEEEE
T ss_pred EeeEEEECCEEEEeccCCCCCcccccCceEEECCCCEEccCEEEecccCCCCCCCCcCHHHHHHHHHHHHhCCeeeeccc
Confidence 57899999999999976432210 012379999999999999999999976532 245678888899999999999998
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHH-cCCcEEEEecccCCCCCCCCCCHHHHHH
Q 013050 80 PLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKE 158 (450)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (450)
+ ...+.....+.+............+.++++......+....+++.++++ .|+..++.++.+.+ ...++.+++.+
T Consensus 124 ~-~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~el~~l~~~~G~~~~k~~~~~~~---~~~~~~~~l~~ 199 (541)
T 2vr2_A 124 A-IPQKGGSLIEAFETWRSWADPKVCCDYSLHVAVTWWSDQVKEEMKILVQDKGVNSFKMFMAYKD---LYMVTDLELYE 199 (541)
T ss_dssp E-CCCTTCCHHHHHHHHHHHHTTTCSSEEEEEEEECSCSHHHHHHHHHHHHTSCCCEEEEESSSTT---TTBCCHHHHHH
T ss_pred c-CCCCCCCHHHHHHHHHHHhccCceEEEeeeecccCCCHHHHHHHHHHHHhCCCCEEEEEeccCC---ccCCCHHHHHH
Confidence 5 3332333444555554444444556666665444444445566777764 69999999876532 23578899999
Q ss_pred HHHHHHhcCCcEEEecCChhhhhh---hhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEE
Q 013050 159 GLSVLARYKRPLLVHAEMEKGSER---HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHI 235 (450)
Q Consensus 159 ~~~~a~~~g~~v~~H~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (450)
+++.|+++++++.+|+++...+.. .+...|... ...+....|...+...+.+.+.+++.. +.++|+
T Consensus 200 ~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~----~~~h~~~~~~~~e~~a~~~~~~la~~~-------~~p~~~ 268 (541)
T 2vr2_A 200 AFSRCKEIGAIAQVHAENGDLIAEGAKKMLALGITG----PEGHELCRPEAVEAEATLRAITIASAV-------NCPLYI 268 (541)
T ss_dssp HHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCS----THHHHHTSCHHHHHHHHHHHHHHHHHH-------TCCEEE
T ss_pred HHHHHHHcCCEEEEEcCCHHHHHHHHHHHHHcCCCC----hhhccccchhHHHHHHHHHHHHHHHHh-------CCCEEE
Confidence 999999999999999987643222 121222111 111223456666777777888888877 889999
Q ss_pred EecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCC----CCceEEcCCCCC-hhhHHHHHHHHhcCCeeEEcC
Q 013050 236 VHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG----DTRFKCAPPIRD-AANKEKLWEALMDGHIDMLSS 310 (450)
Q Consensus 236 ~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~l~~~~~~g~~~~~gt 310 (450)
.|+++. ...+.++++++.|..++++.+++++.++...+... +..+.++||++. ...++.+|+++..|...+++|
T Consensus 269 ~h~ss~-~~~~~i~~ar~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~g~~~~~gt 347 (541)
T 2vr2_A 269 VHVMSK-SAAKVIADARRDGKVVYGEPIAASLGTDGTHYWNKEWHHAAHHVMGPPLRPDPSTPDFLMNLLANDDLTTTGT 347 (541)
T ss_dssp EEECCH-HHHHHHHHHHHTTCCEEEEEBHHHHHCCSGGGGCSSHHHHHTTCCSSCCCSCTTHHHHHHHHHHTTSSCCCBC
T ss_pred EeCCCH-HHHHHHHHHHHcCCeEEEEeehhhhcCCHHHhcCccccccCceEECCCCCCCcchHHHHHHHHhcCCeEEEEe
Confidence 999987 88899999999999999999998887776543221 223567889986 567888999999999999999
Q ss_pred CCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHH-hcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEE
Q 013050 311 DHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVV 388 (450)
Q Consensus 311 D~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv 388 (450)
|+.|+....+....++|...+.|+.+.+..++.++.... ..++|++++++++|.|||++||+ +++|+|++|++|||||
T Consensus 348 D~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~T~~pA~~lgl~~~~G~i~~G~~ADlvv 427 (541)
T 2vr2_A 348 DNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVI 427 (541)
T ss_dssp CBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEE
T ss_pred CCCCCChHHhcccCCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCCCCCccCCCCCCCEEE
Confidence 999988877776667899999999999998888777654 45699999999999999999999 6899999999999999
Q ss_pred EeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCcccC-CCCCccccc
Q 013050 389 WEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAP-AACGSPILA 449 (450)
Q Consensus 389 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~-~~~g~~~~~ 449 (450)
||.+..+++..+ .+.+... ++||.+....++|..||++|++||++|+++. +..||+|++
T Consensus 428 ~d~~~~~~~~~~-~~~~~~~-~~p~~g~~~~g~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~ 487 (541)
T 2vr2_A 428 WDPKGTRTISAK-THHQAVN-FNIFEGMVCHGVPLVTISRGKVVYEAGVFSVTAGDGKFIPR 487 (541)
T ss_dssp EEEEEEEECCTT-TCSSSCS-CCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCSCBCCC
T ss_pred EcCCcCeEeCHH-HhhcccC-CCccCCCEEeeeEEEEEECCEEEEECCeeccCCCCceEecC
Confidence 999887777766 6666666 8999999999999999999999999999994 578999986
No 14
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=100.00 E-value=8.4e-48 Score=377.72 Aligned_cols=422 Identities=26% Similarity=0.341 Sum_probs=328.1
Q ss_pred cceeEEEeCCEEEEecc-CCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCC
Q 013050 2 CKRAVEIKEGNIISIVS-EEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMP 80 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~-~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~ 80 (450)
.+++|+|+||+|++|++ .........+.++||++|++|+|||||+|+|+..++....+++....+.++++|||++++++
T Consensus 20 ~~~~v~i~~g~I~~i~~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~e~~~~~~~~~~~~GvTt~~~~~ 99 (452)
T 2gwn_A 20 FPGSVMIDGAFISRIIEGELPADDNLSADEVIECSGLRLFPGCIDDQVHFREPGLTHKATIASESRAAVAGGVTSFMDMP 99 (452)
T ss_dssp EEEEEEEETTEEEEEEESCCCTTCCTTCSEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECS
T ss_pred eeeeEEEECCEEEEEecCCCccccCCCCCeEEeCCCCEEecCEEeeccccCCCCCCcHHHHHHHHHHHHhCCeEEEEcCC
Confidence 35789999999999987 43211001346899999999999999999999877665667888889999999999999997
Q ss_pred CCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHH
Q 013050 81 LNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGL 160 (450)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (450)
++.+.....+.+....+.......+++.++......+ .+.+.++.+.|+.+++.++.+... ..+..+.+.+++.+
T Consensus 100 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~g~~g~k~~~~~~~~-~~~~~~~~~~~~~~ 174 (452)
T 2gwn_A 100 -NTNPPTTMWERLLEKRQIGADTAWANYGFFFGGTNDN---IDEIKRVDKHLVPGLKLFLGSSTG-NMLVDNKETLEKIF 174 (452)
T ss_dssp -CSSSCSCSHHHHHHHHHHHHHHCSSEEEECEECCSSC---HHHHHTCCTTSCSCEEEESSSCCG-GGBCCCHHHHHHHH
T ss_pred -CCCCCCChHHHHHHHHHHhhccCcccEEEEEeecCCC---HHHHHHHHHcCCCEEEEEeccCCC-CcccCCHHHHHHHH
Confidence 6666667777777776766666677887776554432 345555666788999998765421 12334566666555
Q ss_pred HHHHhcCCcEEEecCChhhhhhhh----hhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEE
Q 013050 161 SVLARYKRPLLVHAEMEKGSERHV----KLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIV 236 (450)
Q Consensus 161 ~~a~~~g~~v~~H~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (450)
+ +.+.++..|+++...+...+ ...+.. .....+....|..++.+.+.++++++++. +.++|+.
T Consensus 175 ~---~~~~~~~~h~~~~~~~~~~~~~~~~~~G~~---~~~~~h~~~~~~~~~~~~l~~~~~la~~~-------g~~v~i~ 241 (452)
T 2gwn_A 175 G---ECDLLIATHCEKEEIIRANKEHYKAKYGND---LDIHFHPLIRSEEACYRSSAEAVELAERM-------NARLHIL 241 (452)
T ss_dssp H---HCCSCEEEECCCHHHHHHHHHHHHHHHCSC---CCGGGHHHHSCHHHHHHHHHHHHHHHHHH-------TCCEEEC
T ss_pred H---HcCCEEEEcCCCHHHHHhHHhhhhhhcCcc---cchhhccccCChHHHHHHHHHHHHHHHHh-------CCCEEEE
Confidence 4 45888999998766544432 111100 01111223457778888999999999987 9999988
Q ss_pred ecCChhHHHHHHHH---HHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCC
Q 013050 237 HLSDASSSLDLLME---AKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHS 313 (450)
Q Consensus 237 h~~~~~~~~~~~~~---~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~ 313 (450)
|+++. +.++.+++ .++. ++++++++|+++++.+.+...+..+..+|+++.......++++++.|+.+++|||+.
T Consensus 242 H~~~~-~~~~~~~~~~a~~~~--~v~~~~~~h~~~l~~~~~~~~g~~~~~~P~lr~~~~~~~l~~~l~~Gv~~~lgTD~~ 318 (452)
T 2gwn_A 242 HLSTE-KELSLFRNDIPTAQK--RITSEVCVHHLWFSDTDYGRLGNRIKWNPAIKKESDREALRAAVRNGRIDIIATDHA 318 (452)
T ss_dssp CCCCT-GGGGGSCCSSCGGGC--SEEEEEEHHHHHCCGGGHHHHGGGGCCSSCCCCHHHHHHHHHHHHHSSSCEEECCBC
T ss_pred eCCCH-HHHHHHHHhhcccCC--CeEEEEchHHhhcCHHHHhccCceEEECCCCCCHHHHHHHHHHHHCCCceEEEeCCC
Confidence 99876 66666665 2333 578888999999887766545667778888888888899999999999999999998
Q ss_pred CCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCC
Q 013050 314 PTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEA 393 (450)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~ 393 (450)
|++...+ ..+|+..+.|+.+.+..++.++......++|++++++++|.|||+++|++++|+|++||.|||||+|.++
T Consensus 319 ~~~~~~k---~~~~~~~~~g~~~~e~~~~~~~~~~~~~~ls~~~~l~~~T~~~A~~lgl~~~G~l~~G~~ADlvv~d~~~ 395 (452)
T 2gwn_A 319 PHLLREK---EGSCLQAASGGPLVQHSLLALLELCNQGIFSIEEIVSKTAHIPATLFAIEKRGYIRPGYYADLVLVDPSS 395 (452)
T ss_dssp CCCHHHH---CSCTTTSCCCCCCTTTHHHHHHHHHHTTSSCHHHHHHHHTHHHHHHHTBTTCSSCCTTSBCCEEEEETTS
T ss_pred CCChHHh---cCChhhCCCCCccHHHHHHHHHHHHHcCCCCHHHHHHHHhHhHHHHcCCCCCCcccCCCcCCEEEEcCCC
Confidence 8876543 2468888889999998888777655567899999999999999999999668999999999999999998
Q ss_pred ceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCcccCC-CCCccccc
Q 013050 394 EFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPA-ACGSPILA 449 (450)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~-~~g~~~~~ 449 (450)
+++++.. ++.+... ++|+.|..+.++|..||++|++||++|+++.+ ..|++|+.
T Consensus 396 ~~~~~~~-~~~~~~~-~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~ 450 (452)
T 2gwn_A 396 PHTVSAD-NILSLCG-WSPFEGFTFSHSVAYTFVNGCLAYAKGRLAESRPTVHPLFF 450 (452)
T ss_dssp CEECCTT-TCCSTTC-CCTTTTCEESCEEEEEEETTEEEEETTEECSSCCCCCBCCB
T ss_pred CeEECHH-HccccCC-CCCCCCcEEeeeEEEEEECCEEEEECCeeccCCCCceeeCC
Confidence 8888777 7777777 89999999999999999999999999999977 78999864
No 15
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=100.00 E-value=5.5e-47 Score=370.16 Aligned_cols=407 Identities=30% Similarity=0.410 Sum_probs=309.5
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCC
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPL 81 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~ 81 (450)
.+++|+|+||+|++|++. ++.++||++|++|+|||||+|+|+..++..+.+++....+.++++|||++++++
T Consensus 17 ~~~~v~i~~g~I~~i~~~-------~~~~~id~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~- 88 (426)
T 2z00_A 17 GPADVLIGEGRILSLEGG-------EAKQVVDGTGCFLAPGFLDLHAHLREPGEEVKEDLFSGLLAAVRGGYTDLVSMP- 88 (426)
T ss_dssp EEEEEEEETTEEEESBCC-------CCSEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECS-
T ss_pred ecceEEEECCEEEEEecC-------CCceEEeCCCCEEecCEEEeccccCCCCCCchHHHHHHHHHHHhCCccEEEecC-
Confidence 367899999999999864 145799999999999999999999887665567788889999999999999997
Q ss_pred CCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccC-CCccchHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHH
Q 013050 82 NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP-ENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGL 160 (450)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (450)
...+.......+....+.......+++..++.+.. ...+..+.+.++.+.|+.+++. +..+..+.+.+.+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~i~~-------~~~~~~~~~~l~~~~ 161 (426)
T 2z00_A 89 NTKPPVDTPEAVRALKEKAKALGLARLHPAAALTEKQEGKTLTPAGLLREAGAVLLTD-------DGRTNEDAGVLAAGL 161 (426)
T ss_dssp CSSSCSCSHHHHHHHHHHHHHHTSSEECCEECSBGGGCSSSBCCHHHHHHHTCCEEEC-------TTSCCCCHHHHHHHH
T ss_pred CCCCCcChHHHHHHHHHHhcccCcccEEEEEEeecCCChhhHHHHHHHHHcCCEEEEC-------CCcCCCCHHHHHHHH
Confidence 55554555566655555544433244433333322 1122344566666678877763 222457899999999
Q ss_pred HHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhh-ccCCCCCCceEEEEecC
Q 013050 161 SVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDT-RTDGPAEGAHLHIVHLS 239 (450)
Q Consensus 161 ~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~h~~ 239 (450)
+.|+++|+++.+|+.+......... +.+......+....|...+...+.++++++.+. +..+ .+.++++.|++
T Consensus 162 ~~a~~~g~~v~~H~~~~~~~~~~~~----~~g~~~~~~g~~~~~~~~e~~~~~~~~~~a~~~~~~~~--~g~~~~i~H~~ 235 (426)
T 2z00_A 162 LMAAPLGLPVAVHAEDAGLRRNGVM----NDGPLADLLGLPGNPPEAEAARIARDLEVLRYALRRSP--ATPRLHVQHLS 235 (426)
T ss_dssp HHHGGGTCCEEECCCCHHHHTTCSE----ECSHHHHHHTCCEECHHHHHHHHHHHHHHHHHHHHHCS--SCCCEEETTCC
T ss_pred HHHHhhCCEEEEeCCCHHHHhhhhh----ccCccchhcccccCChHHHHHHHHHHHHHHhhcccccc--CCCcEEEEeCC
Confidence 9999999999999987654332111 111222223344567666777777788777750 0000 28889999999
Q ss_pred ChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhh
Q 013050 240 DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPEL 319 (450)
Q Consensus 240 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~ 319 (450)
.. +..+.++++++.|+.+++++||+++.++...+...+...+..||++....+..++++++.|+.++++||+.|.....
T Consensus 236 ~~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~plr~~~~~~~l~~~l~~G~~~~lgsD~~p~~~~~ 314 (426)
T 2z00_A 236 TK-RGLELVREAKRAGLPVTAEATPHHLTLTEEALRTFDPLFKVAPPLRGEEDREALLEGLLDGTLDAIATDHAPHTLAE 314 (426)
T ss_dssp CH-HHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGGGCCGGGCCSSCCCCHHHHHHHHHHHHHTSSCEECCCBCCCCTTG
T ss_pred CH-HHHHHHHHHHHcCCCEEEEEchHHhEeCHhHhhccCceEEEeCCCCCHHHHHHHHHHHhCCCcEEEecCCCCCCHHH
Confidence 86 78999999999999999999999988876655545556678899998888999999999999999999998876654
Q ss_pred hcccCCCccccCCCCcchhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeC
Q 013050 320 KLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELD 398 (450)
Q Consensus 320 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~ 398 (450)
+ ..+|+..+.|..+.+..++..+.. ....++|++++++++|.|||+++|++ .|+|+|||.|||||+|. .+++++
T Consensus 315 ~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~T~n~A~~lgl~-~G~l~~G~~ADlvv~d~-~~~~~~ 389 (426)
T 2z00_A 315 K---EKDLLRAPFGIPSLEVAFPLLYTELHLKRGFPLQRLVELFTDGPRRVLGLP-PLHLEEGAEASLVLLSP-KERPVD 389 (426)
T ss_dssp G---GSCTTTSCCCBCCTTTHHHHHHHHTHHHHCCCHHHHHHHHTHHHHHHHTCC-CCCSSTTSBCCEEEEEC-CCEECC
T ss_pred c---cCChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhHHHHhCCC-cccccCCCCCCEEEEeC-CcEEEc
Confidence 3 245777788888888888776654 34557999999999999999999997 99999999999999998 557776
Q ss_pred CCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCc
Q 013050 399 NDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGN 437 (450)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 437 (450)
.+ ++.+... ++||.+..+.++|..|||+|++||++++
T Consensus 390 ~~-~~~~~~~-~~p~~g~~~~~~v~~t~v~G~~v~~~~~ 426 (426)
T 2z00_A 390 PS-AFASKAR-YSPWAGWVLGGWPVLTLVAGRIVHEALK 426 (426)
T ss_dssp GG-GCSSSCC-CCTTTTCEECCEEEEEEETTEEEEECCC
T ss_pred HH-HccccCC-CCCcCCCEEEEEEEEEEECCEEEEecCC
Confidence 65 6666666 8999999999999999999999999875
No 16
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=100.00 E-value=1.1e-45 Score=364.51 Aligned_cols=401 Identities=28% Similarity=0.429 Sum_probs=275.8
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCC
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPL 81 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~ 81 (450)
.+++|+|+||+|++|++.... .+.++||++|++|+|||||+|+|+..++..+.+++....+.++++|||++++++
T Consensus 65 ~~~~v~i~~g~I~~i~~~~~~----~~~~~iD~~g~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~- 139 (467)
T 1xrt_A 65 GEFDILVENGKIKKIDKNILV----PEAEIIDAKGLIVCPGFIDIHVHLRDPGQTYKEDIESGSRCAVAGGFTTIVCMP- 139 (467)
T ss_dssp EECEEEEETTEEEEEESSCCC----SSEEEEECTTSEEEECEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECS-
T ss_pred ecceEEEECCEEEEecCCCCC----CCCcEEeCCCCEEccCEEEEeecccCCCCCchhhHHHHHHHHHhCCeEEEEecC-
Confidence 357899999999999975331 245799999999999999999999876655567788889999999999999997
Q ss_pred CCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCC-CccchHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHH
Q 013050 82 NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGL 160 (450)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (450)
...+.....+.+....+.......+++...+.+... .....+.+.++.+.|+..+.. .+.+..+.+.+++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~l~~~g~~~i~~-------~~~~~~~~e~l~~~~ 212 (467)
T 1xrt_A 140 NTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTITKGRKGKEIADFYSLKEAGCVAFTD-------DGSPVMDSSVMRKAL 212 (467)
T ss_dssp CSSSCSCSHHHHHHHHHHHHHHCSSEEEECBCSBGGGCSSSBCCHHHHHHHTCCCBCC-------TTSCCCCHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHhcccCcceEEEEeeecCCCCcccHHHHHHHHHcCCEEEEc-------CCCCCCCHHHHHHHH
Confidence 544545555666655555544333555555433321 112234455666667655432 222357889999999
Q ss_pred HHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCC
Q 013050 161 SVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD 240 (450)
Q Consensus 161 ~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~ 240 (450)
+.|+++|+++.+|+.+...+...+. .+......+....+...+...+.+.+.++... +.++|+.|++.
T Consensus 213 ~~A~~~g~~v~~H~~~~~~~~~~l~-----~g~~~~~~g~~~~~~~~e~~~~~~~~~~~~~~-------g~~~hi~H~~~ 280 (467)
T 1xrt_A 213 ELASQLGVPIMDHCEDDKLAYGVIN-----EGEVSALLGLSSRAPEAEEIQIARDGILAQRT-------GGHVHIQHVST 280 (467)
T ss_dssp HHHHHHTCEEEECCCGGGGTC-------------------------CHHHHHHHHHHHHHHH-------CCEEEESCCCS
T ss_pred HHHHhcCCEEEEECCCHHHHHHHHh-----cCccchhcccccCChHHHHHHHHHHHHHHHHh-------CCCEEEEeCCC
Confidence 9999999999999976554321110 01111111223344444555666666777655 88999999998
Q ss_pred hhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhh
Q 013050 241 ASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK 320 (450)
Q Consensus 241 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~ 320 (450)
. +.++.++++++.|+.+++.+||+++.++...+...+...+..|+++....+..++++++.|+.+++|||+.|.+...+
T Consensus 281 ~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~Gv~~~lgTD~~~~~~~~~ 359 (467)
T 1xrt_A 281 K-LSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLNSGANARVNPPLRKKEDRLALIEGVKRGIIDCFATDHAPHQTFEK 359 (467)
T ss_dssp H-HHHHHHHHHHHTTCCEEEEECGGGGC----------------------CCHHHHHHHHHHTCSCEECCCBCCCCC---
T ss_pred H-HHHHHHHHHHhcCCcEEEeccHHHHhcCHhHhhccCceEEEcCCCCCHHHHHHHHHHHhCCceEEEeeCCCCCChhHh
Confidence 6 789999999999988999999998887766554445556777888877788889999999999999999887654432
Q ss_pred cccCCCccccCCCCcchhhHHHHHHHHHHhcC-CCHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCC
Q 013050 321 LLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDN 399 (450)
Q Consensus 321 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g-ls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~ 399 (450)
. .|...+.|+.+.+..++.+++ ..+.| +|++++++++|.|||++||++ .|+|+|||.|||||+|.+++++++.
T Consensus 360 ~----~~~~~~~g~~g~e~~l~~~l~-~~~~g~ls~~~al~~aT~n~A~~lgl~-~G~I~~G~~ADlvvld~~~~~~i~~ 433 (467)
T 1xrt_A 360 E----LVEFAMPGIIGLQTALPSALE-LYRKGIISLKKLIEMFTINPARIIGVD-LGTLKLGSPADITIFDPNKEWILNE 433 (467)
T ss_dssp ------------CCCCGGGHHHHHHH-HHHTTSSCHHHHHHHHTHHHHHHHTCS-CSCCCTTSBCCEEEEEEEEEEECST
T ss_pred c----ccccCCCCCccHHHHHHHHHH-HHHcCCCCHHHHHHHhccCHHHHhCCC-cccccCCCCCCEEEEeCCCCEEECh
Confidence 1 255567788888877777666 55666 999999999999999999997 9999999999999999998788776
Q ss_pred CCCcccCCCCccccCCceEeeEEEEEEECCeEEEec
Q 013050 400 DHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKE 435 (450)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~ 435 (450)
+ ++.+... ++||.+....++|..|||+|++||+|
T Consensus 434 ~-~~~~~~~-~~p~~g~~~~~~V~~viv~G~~v~~~ 467 (467)
T 1xrt_A 434 E-TNLSKSR-NTPLWGKVLKGKVIYTIKDGKMVYKD 467 (467)
T ss_dssp T-TCCSSCC-CCTTTTCEEEEEEEEEEETTEEEEEC
T ss_pred H-HccCcCC-CCCccCCEEeEEEEEEEECCEEEecC
Confidence 6 6666666 89999998889999999999999986
No 17
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=100.00 E-value=4.5e-39 Score=317.43 Aligned_cols=376 Identities=19% Similarity=0.210 Sum_probs=260.6
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCC
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPL 81 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~ 81 (450)
..++|+|+||||++|++.... .+.++||++|++|+|||||+|+|+....+.. ......+.+|+|++++..+
T Consensus 25 ~~~~v~i~~g~I~~i~~~~~~----~~~~~id~~g~~v~PG~iD~H~H~~~~~~~~-----~~~~~~~~~G~Tt~~~g~c 95 (480)
T 3gip_A 25 RRADLGVRDGRIAAIGELGAH----PARHAWDASGKIVAPGFIDVHGHDDLMFVEK-----PDLRWKTSQGITTVVVGNC 95 (480)
T ss_dssp EECEEEEETTEEEEEECCTTS----CEEEEEECTTSEEEECEEESSCCCTTHHHHS-----TTCHHHHTTTEEEEEECCT
T ss_pred eeeEEEEECCEEEEecCCCCC----CCCeEEECCCCEEccCEEeccccccccccCC-----hhHHHHhcCCeeEEEecCC
Confidence 468999999999999986432 3568999999999999999999986432111 1123558999999998411
Q ss_pred --------CCCCCCCc---------HHHHHHHHHHHh-cCCceEEEEecccc------------CCCccchHHHHHHH--
Q 013050 82 --------NSDPSTIS---------TETLKLKVDAAE-KRIYVDVGFWGGLV------------PENAYNASALEALL-- 129 (450)
Q Consensus 82 --------~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~-- 129 (450)
+..+.... +..+..+.+... ....+++.++.+.. ..+.+.++.+.+++
T Consensus 96 G~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~g~~~~~~~~~~l~~m~~l~~~ 175 (480)
T 3gip_A 96 GVSAAPAPLPGNTAAALALLGETPLFADVPAYFAALDAQRPMINVAALVGHANLRLAAMRDPQAAPTAAEQQAMQDMLQA 175 (480)
T ss_dssp TCCSCSCCCTTCCCGGGGGTCSSCCCSSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCSSTTSCCCHHHHHHHHHHHHH
T ss_pred CcCCCCCCcccchhhhhhhhccCccccCHHHHHHHHHhCCCCceEEEccccHHHHHHhcCCcCCCCCHHHHHHHHHHHHH
Confidence 11111111 123455555544 45577888765432 12334455555555
Q ss_pred --HcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHH
Q 013050 130 --NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSW 207 (450)
Q Consensus 130 --~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 207 (450)
+.|+.+++.+..|... ...+.+++.++++.++++|.++.+|+++... .
T Consensus 176 ~~~~Ga~g~~~~~~y~p~---~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~---------------------------~ 225 (480)
T 3gip_A 176 ALEAGAVGFSTGLAYQPG---AVAQAAELEGLARVAAERRRLHTSHIRNEAD---------------------------G 225 (480)
T ss_dssp HHHHTCCEEEEETTSTTG---GGCCHHHHHHHHHHHHHTTCEEEEECSCSST---------------------------T
T ss_pred HHHCCCcEEeecCccCCc---ccCCHHHHHHHHHHHHHcCCEEEEEecCccc---------------------------c
Confidence 6899999998766421 2357889999999999999999999965431 2
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCceEEEEecCC--------hhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCC
Q 013050 208 EEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD--------ASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDT 279 (450)
Q Consensus 208 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~--------~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 279 (450)
+.+.+.+++.++++. +.++|+.|++. .++.++.++++++.|+.++++++|++...+...+...+.
T Consensus 226 ~~~a~~e~i~la~~~-------g~~v~i~H~s~~~~~~~~~~~~~l~~i~~a~~~G~~Vt~e~~p~~~~~t~~~l~~~~~ 298 (480)
T 3gip_A 226 VEAAVEEVLAIGRGT-------GCATVVSHHKCMMPQNWGRSRATLANIDRAREQGVEVALDIYPYPGSSTILIPERAET 298 (480)
T ss_dssp HHHHHHHHHHHHHHH-------CCEEEETTCCCCSGGGTTTHHHHHHHHHHHHHTTCCEEEEECSCSCEEEECCGGGTTT
T ss_pred HHHHHHHHHHHHHHh-------CCCEEEEEEeccCccchhhHHHHHHHHHHHHHcCCceEEEeeccccCcchhhhcCHHH
Confidence 356788899999877 99999999983 128999999999999999999999999887766555444
Q ss_pred ceEEc-------CCCCC-----------hhhHHHHHHHH-----------------hcCCeeEEcCCCCCCChhhhcccC
Q 013050 280 RFKCA-------PPIRD-----------AANKEKLWEAL-----------------MDGHIDMLSSDHSPTVPELKLLDE 324 (450)
Q Consensus 280 ~~~~~-------~~~~~-----------~~~~~~l~~~~-----------------~~g~~~~~gtD~~~~~~~~~~~~~ 324 (450)
..++. |++.. ....+.+++++ ..+...++|||+.+....
T Consensus 299 ~~~~~~~~~~~~p~~~g~~~~~ia~~~~~~~~~a~~~~l~~g~i~~~~~~~~~~~~~~~~~~~~gsD~~~~~~~------ 372 (480)
T 3gip_A 299 IDDIRITWSTPHPECSGEYLADIAARWGCDKTTAARRLAPAGAIYFAMDEDEVKRIFQHPCCMVGSDGLPNDAR------ 372 (480)
T ss_dssp SSCCEEEEESSCGGGTTCBHHHHHHHHTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEECCCCCTTCSS------
T ss_pred HHHHhhccccCCCccCCCcHHHHHHHcCCCHHHHHHHhccCCeEEEeCCHHHHHHHHcCCCeEEecCCcccCCC------
Confidence 44444 66532 12233333322 234455677886544211
Q ss_pred CCccccCCCCcchhhHHHHHHHHH-H-hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCCC
Q 013050 325 GNFLKAWGGISSLQFVLPVTWSYG-R-KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHP 402 (450)
Q Consensus 325 ~~~~~~~~g~~~~~~~~~~~~~~~-~-~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~ 402 (450)
........++..+... + ..++|++++++++|.|||+++|+++.|+|++|+.|||+|+|.+...+..
T Consensus 373 --------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~t~~~a~~~g~~~~G~l~~G~~AD~vv~d~~~~~~~~---- 440 (480)
T 3gip_A 373 --------PHPRLWGSFTRVLGRYVREARLMTLEQAVARMTALPARVFGFAERGVLQPGAWADVVVFDPDTVADRA---- 440 (480)
T ss_dssp --------CCTHHHHHHHHHHHCCCCCTCSSCHHHHHHHHTHHHHHHHTCTTCSSCSTTSBCCEEEECTTTCBCCC----
T ss_pred --------CChhhhhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHcCCCCCCccCCCCCCCEEEEcCccccCcc----
Confidence 1122233445555433 3 2459999999999999999999955799999999999999988744321
Q ss_pred cccCCCCccccCCceEeeEEEEEEECCeEEEecCcccCCCCCcccccC
Q 013050 403 VHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGSPILAT 450 (450)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~g~~~~~~ 450 (450)
.+..+ ......|..|||+|++||++|++++ ..||+|++.
T Consensus 441 -~~~~~-------~~~~~~v~~v~v~G~~v~~~g~~~~-~~G~~lr~~ 479 (480)
T 3gip_A 441 -TWDEP-------TLASVGIAGVLVNGAEVFPQPPADG-RPGQVLRAG 479 (480)
T ss_dssp -CSSST-------TCCCBSEEEEEETTEEEESSCCSSS-CCCCBCCC-
T ss_pred -ccccc-------cccCCCccEEEECCEEEEECCeEcC-CCCcCcCCC
Confidence 11111 1123469999999999999999999 899999863
No 18
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.1e-38 Score=298.25 Aligned_cols=327 Identities=20% Similarity=0.207 Sum_probs=260.8
Q ss_pred CCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCc-eEEEEecc
Q 013050 35 GEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY-VDVGFWGG 113 (450)
Q Consensus 35 ~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 113 (450)
.|++|+||+||+|+|+.. +. .......+++.|+|++++|| ++.|..+..+.+..+.+++..... +++.++++
T Consensus 22 ~~~~vlPG~ID~HvHlre-G~-----~~~e~~aA~aGG~Ttvi~mP-nt~P~~~~~~~~~~~~~~a~~~~~~vd~~~~~~ 94 (359)
T 3pnu_A 22 SNAMKLKNPLDMHLHLRD-NQ-----MLELIAPLSARDFCAAVIMP-NLIPPLCNLEDLKAYKMRILKACKDENFTPLMT 94 (359)
T ss_dssp SCCEEEESCEEEEECCCS-HH-----HHHHHHHHHHTTCSEEEECC-CCSSCCCSHHHHHHHHHHHHHHHTTSCCEEEEE
T ss_pred CCcEEccCcEEccccCCC-CC-----cchhHHHHHhCCCcEEEECC-CCCCCCCcHHHHHHHHHHHhccCCCceEEEeee
Confidence 489999999999999987 43 23334477889999999999 999999999999888887766555 88888887
Q ss_pred --ccCCCccchHHHHHHHHcCCcEEEEecccCC---CCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhcc
Q 013050 114 --LVPENAYNASALEALLNAGVLGLKSFMCPSG---INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLED 188 (450)
Q Consensus 114 --~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~ 188 (450)
+. ....+++.++.+. +.++|.|+.... .++.+..+.+.++++++.+++.|.++.+|+++...+.
T Consensus 95 l~lt---~~~~~el~~l~~~-v~~~Kl~~aga~~~s~~~~~~~~~~~l~~~l~~~~~~g~~v~vHaEd~~~i~------- 163 (359)
T 3pnu_A 95 LFFK---NYDEKFLYSAKDE-IFGIKLYPAGITTNSNGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVM------- 163 (359)
T ss_dssp EECS---CCCHHHHHHHTTT-CSEEEECBTTSSSSCTTSBCCCCHHHHHHHHHHHHHTTCCEEECCCCSSCGG-------
T ss_pred eEec---CCCHHHHHHHHHh-hhehhheeCCCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEecCCchHhH-------
Confidence 55 2235677777777 889999875321 1233445889999999999999999999998765311
Q ss_pred CcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhc
Q 013050 189 DTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLA 268 (450)
Q Consensus 189 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 268 (450)
..|.+.+.+++.++++ .++.++|+.|+++. ++++.++++ .+|++++||+|++
T Consensus 164 -----------------~~E~~ai~r~~~la~~------~~g~~lhi~HvSt~-~~v~~I~~A----~~VtaEv~phhL~ 215 (359)
T 3pnu_A 164 -----------------DRESNFAKIYEKLAKH------FPRLKIVMEHITTK-TLCELLKDY----ENLYATITLHHLI 215 (359)
T ss_dssp -----------------GTTGGGHHHHHHHHHH------CTTSCEEECSCCSH-HHHHHHHHC----TTEEEEECSGGGT
T ss_pred -----------------HHHHHHHHHHHHHHHH------cCCCcEEEEecCcH-HHHHHHHhc----CCceEEEechhhE
Confidence 0234457888888874 34899999999998 999999886 5799999999999
Q ss_pred ccccccC--CCCCceEEcCCCCChhhHHHHHHHHhcCCee-EEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHH
Q 013050 269 FSAEEIP--DGDTRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTW 345 (450)
Q Consensus 269 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~-~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 345 (450)
++.+.+. .++..++++||+|...+++++|+++.+|... +++||+.|+....|..+ | .+.|+.+....++.++
T Consensus 216 lt~~~~~~~~~~~~~k~~PPLR~~~dr~aL~~al~dG~id~~iaTDHaPh~~~eK~~~---~--g~~Gi~~~~~~L~l~~ 290 (359)
T 3pnu_A 216 ITLDDVIGGKMNPHLFCKPIAKRYEDKEALCELAFSGYEKVMFGSDSAPHPKDTKECC---G--CAAGVFSAPVILPVLA 290 (359)
T ss_dssp CCHHHHHTSSCCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCBC---------C--CCSCBCCGGGHHHHHH
T ss_pred EcHHHhcCcCCCCceEEcCCCCCHHHHHHHHHHHhcCCCCEEEecCCCCCCHHHhCCC---C--CCCChhhHHHHHHHHH
Confidence 9988864 3588899999999999999999999999999 79999999988877432 2 3457777778888887
Q ss_pred HHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCcccc-CCceEeeEEE
Q 013050 346 SYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAY-LGRRLSGKVL 423 (450)
Q Consensus 346 ~~~~~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~ 423 (450)
+.+ +.+++++++++..+.|||+++|++. .+| |||+|+| .+|++..+ .+.++.. ++|| +|..+.++|.
T Consensus 291 ~~~-~~~~~l~~lv~~~s~nPAki~gL~~----~~G--Adlvl~d--~~~~v~~~-~~~s~~~-~tPf~~G~~l~G~v~ 358 (359)
T 3pnu_A 291 ELF-KQNSSEENLQKFLSDNTCKIYDLKF----KED--KILTLEE--KEWQVPNV-YEDKYNQ-VVPYMAGEILKFQLK 358 (359)
T ss_dssp HHH-HHHSCHHHHHHHHTHHHHHHHTCCC----SSC--CEEEEEC--CCEECCSC-EECSSCE-ECCTTTTCEESCEEC
T ss_pred HHH-hhcCCHHHHHHHHHHhHHHHhCCCC----CCC--CeEEEEe--cCEEeCch-hcccCCC-ccccCCCCEEEEEEe
Confidence 766 4457999999999999999999931 134 9999999 66998887 7788877 9999 9999888874
No 19
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=100.00 E-value=8.1e-37 Score=303.24 Aligned_cols=375 Identities=17% Similarity=0.161 Sum_probs=246.0
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCC
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPL 81 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~ 81 (450)
..++|+|+||+|++|++.... .+.++||++|++|+|||||+|+|+..+... ....+.+++.|||++++++.
T Consensus 39 ~~~~v~i~~g~I~~i~~~~~~----~~~~~iD~~g~~v~PG~iD~H~H~~~~~~~-----~~~~~~~~~~G~Tt~~~~~~ 109 (496)
T 1rk6_A 39 RLADVGVRGDRIAAVGDLSAS----SARRRIDVAGKVVSPGFIDSHTHDDNYLLK-----HRDMTPKISQGVTTVVTGNC 109 (496)
T ss_dssp EECEEEEETTEEEEEECCTTS----CBSCEEECTTCEEEECEEESSCCCTTHHHH-----CTTCHHHHTTTEEEEEESCT
T ss_pred eccEEEEECCEEEEecCCCCC----CCCeEEeCCCCEEecCEeeeeecCCccccc-----cHHHHHHHcCCeEEEEeCCC
Confidence 457899999999999975321 346799999999999999999999754321 12356789999999998852
Q ss_pred C--CCCCC--C--------------cHHHHHHHHHHHhc-CCceEEEEecccc----------C--CCccchHHHHHH--
Q 013050 82 N--SDPST--I--------------STETLKLKVDAAEK-RIYVDVGFWGGLV----------P--ENAYNASALEAL-- 128 (450)
Q Consensus 82 ~--~~~~~--~--------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------~--~~~~~~~~~~~~-- 128 (450)
+ ..|.. + ....+..+.+.+.. ...+++..+.+.. . ...+..+.++.+
T Consensus 110 g~~~~p~~~~~l~~~i~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 189 (496)
T 1rk6_A 110 GISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALRAAPPAVNAACMVGHSTLRAAVMPDLRREATADEIQAMQALAD 189 (496)
T ss_dssp TCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCSCCSSCCCHHHHHHHHHHHH
T ss_pred CCCCCCCChHHHHHhhcccCcccccCccCHHHHHHHHhccCCccceEEecccccceeeeccccccCCCHHHHHHHHHHHH
Confidence 2 22211 0 01223333344433 3344554432110 0 111223333333
Q ss_pred --HHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChH
Q 013050 129 --LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPS 206 (450)
Q Consensus 129 --~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 206 (450)
.+.|+.+++....+.. .+..+.+++.++++.+++++.++.+|+++...
T Consensus 190 ~~~~~G~~~~~~~~~~~~---~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~--------------------------- 239 (496)
T 1rk6_A 190 DALASGAIGISTGAFYPP---AAHASTEEIIEVCRPLITHGGVYATHMRDEGE--------------------------- 239 (496)
T ss_dssp HHHHHTCCEEEEETTSGG---GTTCCHHHHHHHHTHHHHHTCEEEEECSCSST---------------------------
T ss_pred HHHHcCCcEEeeccccCC---CCCCCHHHHHHHHHHHHHcCCEEEEEeCCCcc---------------------------
Confidence 4689988876543311 02457788999999999999999999964321
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCceEEEEecCC--------hhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCC-
Q 013050 207 WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD--------ASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG- 277 (450)
Q Consensus 207 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~--------~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~- 277 (450)
++.+.+.++++++++. +.++|+.|++. .++.++.+++++..| .++++.++++...+...+...
T Consensus 240 ~~~~~l~~~~~~a~~~-------g~~v~i~H~~~~~~~~~g~~~~~~~~l~~a~~~g-~v~~~~~~~~~~~~~~~~~~l~ 311 (496)
T 1rk6_A 240 HIVQALEETFRIGREL-------DVPVVISHHKVMGKLNFGRSKETLALIEAAMASQ-DVSLDAYPYVAGSTMLKQDRVL 311 (496)
T ss_dssp THHHHHHHHHHHHHHH-------TSCEEECSCCCCSGGGTTTHHHHHHHHHHHHHHS-CEEEEECSCSCEEEECCCCTTT
T ss_pred cHHHHHHHHHHHHHHc-------CCeEEEEEEeccCCcchhhHHHHHHHHHHHHHcC-CeEEEEeccCCCCCcccHHHhc
Confidence 3456678888888877 89999999942 225678888887788 888887776544332222211
Q ss_pred ---CCceEEcCCC--------------CChhhHHHHHHHHhcCC-----------------eeEEcCCCCCCChhhhccc
Q 013050 278 ---DTRFKCAPPI--------------RDAANKEKLWEALMDGH-----------------IDMLSSDHSPTVPELKLLD 323 (450)
Q Consensus 278 ---~~~~~~~~~~--------------~~~~~~~~l~~~~~~g~-----------------~~~~gtD~~~~~~~~~~~~ 323 (450)
+..+..+|+. +.......+|++++.|+ .+++|||+.|.+..
T Consensus 312 ~~~~~~v~~~p~~~~l~~~~l~~~~~~~g~~~~~~l~~~l~~G~i~~~~~~~~v~~~~~~~~~~iGTD~~~~~~~----- 386 (496)
T 1rk6_A 312 LAGRTLITWCKPYPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMDEPDVQRILAFGPTMIGSDGLPHDER----- 386 (496)
T ss_dssp TSSCEEEEEESSCGGGTTCBHHHHHHHTTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEECCCCCTTCSS-----
T ss_pred CccceEEeccCCCcccccCcHHHHHHHcCCCHHHHHHHHHhcCceeecCCHHHHHHHHcCCCEEEecCCCCCCCC-----
Confidence 1223333332 22344667788888887 57999998765310
Q ss_pred CCCccccCCCCcchhhHHHHHHHHHH-hc-CCCHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCC
Q 013050 324 EGNFLKAWGGISSLQFVLPVTWSYGR-KY-GVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDH 401 (450)
Q Consensus 324 ~~~~~~~~~g~~~~~~~~~~~~~~~~-~~-gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~ 401 (450)
........++..+.... +. .+|++++++++|.|||++||+++.|+|++|+.|||||+|.++..+...
T Consensus 387 ---------~~~~~~~~~~~~l~~~v~~~~~l~~~~~l~~~T~~~A~~lgl~~~G~i~~G~~ADlv~~d~~~~~~~~~-- 455 (496)
T 1rk6_A 387 ---------PHPRLWGTFPRVLGHYSRDLGLFPLETAVWKMTGLTAAKFGLAERGQVQPGYYADLVVFDPATVADSAT-- 455 (496)
T ss_dssp ---------CCTHHHHHHHHHHCCCCCCTCSSCHHHHHHTTTHHHHHHHTCTTCSSCCTTSBCCEEEECTTTCBCCCC--
T ss_pred ---------CCchhhccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhCCCCCCCcCCCCcccEEEEcCcccccccc--
Confidence 00111222344433322 23 499999999999999999999558999999999999999886432211
Q ss_pred CcccCCCCccccCCceEeeEEEEEEECCeEEEecCcccCCCCCccccc
Q 013050 402 PVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGSPILA 449 (450)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~g~~~~~ 449 (450)
+ .+++ ...++|..||++|++||++|++++...|+++++
T Consensus 456 -~------~~~~---~~~~~v~~v~v~G~~v~~~g~~~~~~~g~~l~~ 493 (496)
T 1rk6_A 456 -F------EHPT---ERAAGIHSVYVNGAAVWEDQSFTGQHAGRVLNR 493 (496)
T ss_dssp -S------SSTT---CCCBSEEEEEETTEEEEETTEECSCCCCCBCCC
T ss_pred -c------cccc---ccCCCceEEEECCEEEEECCeeccCCCceEeec
Confidence 0 1121 123579999999999999999999999999975
No 20
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=100.00 E-value=3.6e-35 Score=290.81 Aligned_cols=365 Identities=15% Similarity=0.104 Sum_probs=212.8
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcc-----------------------
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW----------------------- 58 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~----------------------- 58 (450)
.+++|+|+||+|++|++..+.+ .++.++||++|++|+|||||+|+|+........
T Consensus 50 ~~~~V~I~~g~I~~Vg~~~~~~--~~~~~viD~~g~~v~PGlID~H~Hl~~~~~rg~~~~~~~~l~~~l~~~~~~~~~~~ 127 (479)
T 3h4u_A 50 RDAGLYIEDNRIVAVGPSAELP--ETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAAQNAELFGWLTNLYKIWAHLT 127 (479)
T ss_dssp EEEEEEEETTEEEEEEEGGGSC--SCCSEEEECTTEEEEECEEECCCCGGGGGSCSCTTTTTCCHHHHHHHHHHHHTTCC
T ss_pred cccEEEEECCEEEEEeCCcccC--CCCCeEEeCCCCEEecceeecccccchhhhccccccCCCCHHHHHHHhhhhhhhCC
Confidence 4689999999999999865543 246789999999999999999999965422100
Q ss_pred -cch----HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEecc------ccC-----CCccch
Q 013050 59 -EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG------LVP-----ENAYNA 122 (450)
Q Consensus 59 -~~~----~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-----~~~~~~ 122 (450)
+++ .....+++++|||++++++ ...+............+....+.......... ..+ ......
T Consensus 128 ~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~ 206 (479)
T 3h4u_A 128 PEMIEVSTLTAMAELLQSGCTTSSDHL-YIYPNGSRLDDSIGAAQRIGMRFHASRGAMSVGQRDGGLPPDSVVEREPDIL 206 (479)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEECCB-CCCCTTCCHHHHHHHHHHHTCEEEEEEEECC----------------CHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEECc-cccCCcchHHHHHHHHHHcCCEEEEEeeecccccccccCCcccccccHHHHH
Confidence 001 1235578899999999985 33222222222222222222221111111110 000 111223
Q ss_pred HHHHHHHHcCC-----cEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChh-hhhhhhhhccCcCCcccc
Q 013050 123 SALEALLNAGV-----LGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK-GSERHVKLEDDTLDTRSY 196 (450)
Q Consensus 123 ~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~-~~~~~~~~~~~~~~~~~~ 196 (450)
+...++++... ..++....+ .....++.+.++++++.|+++|+++.+|+.+.. .+...+...+
T Consensus 207 ~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g-------- 275 (479)
T 3h4u_A 207 RDTQRLIETYHDEGRYAMLRVVVAP---CSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVNDIAYSREKFG-------- 275 (479)
T ss_dssp HHHHHHHHHHCCCSTTCSEEEEEEE---SCTTSSCHHHHHHHHHHHHHHTCEEEEEESCSHHHHHC--------------
T ss_pred HHHHHHHHHhhccCCCCceEEEEec---CCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHcC--------
Confidence 34444443211 112222222 112357889999999999999999999994433 2221111110
Q ss_pred ccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCC
Q 013050 197 STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD 276 (450)
Q Consensus 197 ~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~ 276 (450)
...++.+.+. + ..+.+..+.|+... +.+.++.+++.++.+.. ||........
T Consensus 276 ----------------~~~~~~~~~~--g--~~~~~~~i~H~~~~--~~~~~~~l~~~g~~v~~--~p~s~~~l~~---- 327 (479)
T 3h4u_A 276 ----------------MTPAEYAEDL--G--WVGHDVWHAHCVQL--DDAGIGLFARTGTGVAH--CPCSNMRLAS---- 327 (479)
T ss_dssp -----------------CHHHHHHHT--T--CCSTTEEEEECTTC--CHHHHHHHHHHTCEEEE--CHHHHHHTTC----
T ss_pred ----------------CCHHHHHHHc--C--CCCCCeEEEEecCC--CHHHHHHHHHcCCeEEE--ChhHhhhcCC----
Confidence 0011222221 0 11445667787752 33456666666655444 7754332110
Q ss_pred CCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHH-HHHHHHHH--hcCC
Q 013050 277 GDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVL-PVTWSYGR--KYGV 353 (450)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~--~~gl 353 (450)
.. ..+.++++.|+.+++|||+.+.+.... ...... ........ ...+
T Consensus 328 ------~~---------~~~~~~~~~Gv~v~lgtD~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~l 377 (479)
T 3h4u_A 328 ------GI---------APVKKMRLAGVPVGLGVDGSASNDGAQ---------------MVAEVRQALLLQRVGFGPDAM 377 (479)
T ss_dssp ------CC---------CCHHHHHHTTCCEEECCCCTTSSCCCC---------------HHHHHHHHHHHHHHHHCTTSC
T ss_pred ------CC---------CCHHHHHHCCCeEEEeCCCCccCCCcC---------------HHHHHHHHHHHhcccCCCCCC
Confidence 01 124567889999999999765422111 111111 11111111 2239
Q ss_pred CHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceE--eeEEEEEEECCeE
Q 013050 354 TLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRL--SGKVLATISRGNL 431 (450)
Q Consensus 354 s~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~v~v~G~~ 431 (450)
|++++++++|.|||+++|++++|+|++||.|||||+|.++....+. . ++|+.++++ ..+|..|||+|++
T Consensus 378 ~~~~al~~~T~~~A~~lg~~~~G~l~~G~~ADlvv~d~~~~~~~~~--------~-~~~~~~~~~~~~~~v~~v~v~G~~ 448 (479)
T 3h4u_A 378 TAREALEIATLGGAKVLNRDDIGALKPGMAADFAAFDLRQPLFAGA--------L-HDPVAALVFCAPSQTAYTVVNGKV 448 (479)
T ss_dssp CHHHHHHHTTHHHHHHHTCSSSSSCSTTSBCCEEEEETTSGGGTTC--------T-TSHHHHHHHSSCCCCSEEEETTEE
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCccCCCCcCCEEEEeCCCCccCCc--------c-cCHHHHHHccCCCCcCEEEECCEE
Confidence 9999999999999999999449999999999999999886443220 1 345444433 4689999999999
Q ss_pred EEecCcccCCCCCccc
Q 013050 432 VYKEGNHAPAACGSPI 447 (450)
Q Consensus 432 v~~~g~~~~~~~g~~~ 447 (450)
||++|+++..+.++.+
T Consensus 449 v~~~g~~~~~d~~~~~ 464 (479)
T 3h4u_A 449 VVREGRLATLDLPPVI 464 (479)
T ss_dssp EEETTEECSSCHHHHH
T ss_pred EEECCEECCCCHHHHH
Confidence 9999999987655543
No 21
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=100.00 E-value=1.6e-35 Score=279.03 Aligned_cols=332 Identities=17% Similarity=0.183 Sum_probs=258.4
Q ss_pred CCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCc--eEEEEec
Q 013050 35 GEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY--VDVGFWG 112 (450)
Q Consensus 35 ~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 112 (450)
.+++|+||+||+|+|+.. +.. ....+.+++.|||++++++ ++.|.....+.+..+.+.+..... .++..++
T Consensus 4 ~~~~v~PG~ID~HvH~~~-g~~-----~~e~~aa~~gGvTtvv~mp-nt~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (347)
T 2z26_A 4 SQVLKIRRPDDWHLHLRD-GDM-----LKTVVPYTSEIYGRAIVMP-NLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLM 76 (347)
T ss_dssp CCEEEEECCCEEEECCCS-HHH-----HHHHHHHHHTTCSEEEECC-CCSSCCCSHHHHHHHHHHHHHTSCTTCCCEEEE
T ss_pred CCeEECCCcceeeecCCC-CCc-----hhhHHHHHhCCCCEEEECC-CCCCCCCCHHHHHHHHHHHhcccCCcccEEEEE
Confidence 357999999999999987 432 2345788999999999999 888888888888887777765433 4444445
Q ss_pred cccCCCccchHHHHHHHHcCC-cEEEEecccCCCC-CCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCc
Q 013050 113 GLVPENAYNASALEALLNAGV-LGLKSFMCPSGIN-DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDT 190 (450)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~ 190 (450)
.+........+++..+.+.|+ .++|.|+.++..+ +.+..+.+.+.++++.+++.|.++.+|+++....
T Consensus 77 ~~~~~~~~~~~ei~~l~~~G~~~g~K~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~vH~ed~~~~---------- 146 (347)
T 2z26_A 77 TCYLTDSLDPNELERGFNEGVFTAAKLYPANATANSSHGVTSVDAIMPVLERMEKIGMPLLVHGEVTHAD---------- 146 (347)
T ss_dssp EEECCTTCCHHHHHHHHHTTSEEEEEECCCCTTCCTTTCCSCGGGGHHHHHHHHHHTCCEEECCCCCCTT----------
T ss_pred EEEeCCCCCHHHHHHHHHCCCeEEEEEeecCCcCCCCCccCCHHHHHHHHHHHHHhCCEEEEEecCCccc----------
Confidence 432222223677888888998 8999998875322 3445688999999999999999999999764310
Q ss_pred CCccccccccCCCChHHHHHHHHHHH--HHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhc
Q 013050 191 LDTRSYSTYLKTRPPSWEEAAIRELL--TVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLA 268 (450)
Q Consensus 191 ~~~~~~~~~~~~~p~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 268 (450)
. .+...|...+.+.+ .+++. ++.++|+.|+++. ++++.+++++ ..|++++||++++
T Consensus 147 ~-----------~~~~~E~~~~~~~i~~~la~~-------~~~~~hi~Hvst~-~~~~~i~~ak---~~Vt~e~~ph~L~ 204 (347)
T 2z26_A 147 I-----------DIFDREARFIESVMEPLRQRL-------TALKVVFEHITTK-DAADYVRDGN---ERLAATITPQHLM 204 (347)
T ss_dssp S-----------CGGGHHHHHHHHTHHHHHHHS-------TTCCEEECSCCSH-HHHHHHHTSC---TTEEEEECHHHHH
T ss_pred c-----------CHHHHHHHHHHHHHHHHHHhh-------cCCcEEEEECCcH-HHHHHHHHhC---CCceEeecchHhe
Confidence 0 01113555667766 46663 4899999999998 8999888864 4799999999999
Q ss_pred ccccccCC--CCCceEEcCCCCChhhHHHHHHHHhcCCee-EEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHH
Q 013050 269 FSAEEIPD--GDTRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTW 345 (450)
Q Consensus 269 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~-~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 345 (450)
++.+.+.. ++..++++||+|...+++.+|+++..|... +++||+.|+....+.. .+. ..|+.+.+..++.++
T Consensus 205 l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~~l~~G~id~~i~SDhaP~~~~~K~~---~~g--~~Gi~~~e~~l~l~~ 279 (347)
T 2z26_A 205 FNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKES---SCG--CAGCFNAPTALGSYA 279 (347)
T ss_dssp CCHHHHHTTSBCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCCHHHHSS---SSB--CCCCCCTTTHHHHHH
T ss_pred ecHHHhcCcCCCccEEEeCCCCCHHHHHHHHHHHhcCCCCeEEecCCCCCCHHHhcC---CCC--CCCcCcHHHHHHHHH
Confidence 99887643 678899999999999999999999999998 7999999998776643 222 357777798899888
Q ss_pred HHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCcccc-CCceEeeEEE
Q 013050 346 SYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAY-LGRRLSGKVL 423 (450)
Q Consensus 346 ~~~~~~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~ 423 (450)
... +.++|+++++++.|.|||++||+ ++.|+| +|+ +..+++..+ .+.++.. ++|| +|..+.++|.
T Consensus 280 ~~~-~~~~sl~~~v~~~s~nPAki~gl~~~kG~i--------~l~--~~~~~v~~~-~~~s~~~-~sPf~~G~~l~g~v~ 346 (347)
T 2z26_A 280 TVF-EEMNALQHFEAFCSVNGPQFYGLPVNDTFI--------ELV--REEQQVAES-IALTDDT-LVPFLAGETVRWSVK 346 (347)
T ss_dssp HHH-HHTTCGGGHHHHHHTHHHHHHTCCCCCCEE--------EEE--CCCEECCSC-EECSSSE-ECCTTTTCEESCEEC
T ss_pred HHh-hcCCCHHHHHHHHhHhHHHHhCCCCCCCeE--------EEE--cceEEEchh-hccccCC-cccccCCcEEEeEEe
Confidence 744 56799999999999999999999 457875 677 556888877 7888888 9999 6998888774
No 22
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=100.00 E-value=4.1e-35 Score=287.85 Aligned_cols=360 Identities=15% Similarity=0.086 Sum_probs=213.5
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCC---Cc---------------------
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR---TE--------------------- 57 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~---~~--------------------- 57 (450)
.+++|+|+||+|++|++..+.+ ..++.++||++|++|+|||||+|+|+....+ ..
T Consensus 26 ~~~~v~i~~g~I~~vg~~~~~~-~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~~~~~~~~wl~~~~~~~~~~~~~ 104 (447)
T 4f0r_A 26 ENHAIAIRDGKIAAIIPAADAA-GLEADERLELPDHVLMPGLINLHGHSAMSLLRGLADDKALMDWLTNYIWPTEGKHVH 104 (447)
T ss_dssp EEEEEEEETTEEEEEEEHHHHT-TSCEEEEEEEEEEEEEECEEEEEECGGGGGGTTSSCSSCHHHHHHHTHHHHHHHHCS
T ss_pred eceEEEEECCEEEEEecccccc-cCCCCeEEeCCCcEEeeCccchhhChhhHhhccCCCCCCHHHHHHHhhhhhhhccCC
Confidence 4689999999999999865432 2346789999999999999999999943211 00
Q ss_pred ccchH----HHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccC---CCccchHHHHHHHH
Q 013050 58 WEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP---ENAYNASALEALLN 130 (450)
Q Consensus 58 ~~~~~----~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 130 (450)
.++.. ....+++++|||+++++. . ..............+............. ...+..+...++.+
T Consensus 105 ~e~~~~~~~~~~~~~l~~GvTtv~d~~-~------~~~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (447)
T 4f0r_A 105 DDFVFDGSLLAMGEMIRGGTTTINDMY-F------YNAAVARAGLASGMRTFVGCSILEFPTNYASNADDYIAKGMAERS 177 (447)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEECB-S------CHHHHHHHHHHHTCEEEEEEEECSSCCSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEcc-c------CHHHHHHHHHHcCCeEEEEchhcCCCcccccCHHHHHHHHHHHHH
Confidence 01111 234568889999999985 1 1222222222222222222222211111 11123344445544
Q ss_pred c--CCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCh-hhhhhhhhhccCcCCccccccccCCCChHH
Q 013050 131 A--GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME-KGSERHVKLEDDTLDTRSYSTYLKTRPPSW 207 (450)
Q Consensus 131 ~--g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 207 (450)
. |...++....+. .....+.+.+.++++.|+++|+++.+|+.+. ..+...+...+
T Consensus 178 ~~~~~~~i~~~~~~~---~~~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~~~g------------------- 235 (447)
T 4f0r_A 178 QFLGEDLLTFTLAPH---APYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHG------------------- 235 (447)
T ss_dssp TTTTCTTEEEEEEEC---CGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHS-------------------
T ss_pred HhcCCCceEEEEecC---CCCCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcC-------------------
Confidence 3 444444433332 2235788999999999999999999999544 22222221111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCC
Q 013050 208 EEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPI 287 (450)
Q Consensus 208 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (450)
...++.+.+. + ..+.+..+.|+.. -+.+.++.+++.|+.+.. ||........
T Consensus 236 -----~~~i~~~~~~--g--~~~~~~~~~H~~~--~~~~~~~~~~~~g~~~~~--~p~~~~~~~~--------------- 287 (447)
T 4f0r_A 236 -----QRPLARLQRL--G--LLSPRLVAAHMVH--LNDAEVELAARHGLSTAH--NPASNMKLAS--------------- 287 (447)
T ss_dssp -----SCHHHHHHHH--T--CCSTTEEEEECCS--CCHHHHHHHHHHTCEEEE--CHHHHHHTTC---------------
T ss_pred -----CCHHHHHHHc--C--CCCCCcEEEeccC--CCHHHHHHHHHcCCEEEE--CchhhhhcCC---------------
Confidence 0011222221 0 1144566777775 233456666666765544 6653221100
Q ss_pred CChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHH---hcCCCHHHHHHHHhh
Q 013050 288 RDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR---KYGVTLEQLASWWSE 364 (450)
Q Consensus 288 ~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~gls~~~al~~aT~ 364 (450)
....+..+++.|+.++++||+.+.+....++ .+..+........ ..++|++++++++|.
T Consensus 288 ----~~~~~~~~~~~Gv~v~lgTD~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~ 349 (447)
T 4f0r_A 288 ----GISPVSKLMDAGVAVGIGTDGAASNNKLDML--------------AETRLAALLAKVGTLDPTSVPAAAAIRMATL 349 (447)
T ss_dssp ----CCCCHHHHHHTTCEEEECCCCGGGTCCCCHH--------------HHHHHHHHHHHHHHTCTTSSCHHHHHHHHTH
T ss_pred ----CCCcHHHHHHCCCcEEEeCCCCcCCCCCCHH--------------HHHHHHHHHhhhhccCCCCCCHHHHHHHHHH
Confidence 0112466788999999999975432111100 0111111122221 458999999999999
Q ss_pred chhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCce---EeeEEEEEEECCeEEEecCcccC
Q 013050 365 RPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRR---LSGKVLATISRGNLVYKEGNHAP 440 (450)
Q Consensus 365 ~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~v~v~G~~v~~~g~~~~ 440 (450)
|||+++|+ +++|+|++||.|||||+|.++.+..+.. +|+.... ...+|..||++|++||++|++++
T Consensus 350 n~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~----------~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~ 419 (447)
T 4f0r_A 350 NGARALGIADKVGSVKVGKQADLIALDLAQLETAPAF----------DPISHVVYAAGREQVSHVWVKGRALMRERKLTT 419 (447)
T ss_dssp HHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSCS----------CHHHHHHHTCCGGGEEEEEETTEEEEETTEESS
T ss_pred HHHHHhCCCCCccccCCCCcCCEEEEeCCCCCcCCCc----------ChHHHheecCCCCCceEEEECCEEEEECCeECc
Confidence 99999999 6689999999999999998875443322 1211111 12579999999999999999998
Q ss_pred CCCCccc
Q 013050 441 AACGSPI 447 (450)
Q Consensus 441 ~~~g~~~ 447 (450)
.+.++.+
T Consensus 420 ~d~~~~~ 426 (447)
T 4f0r_A 420 LDESDLK 426 (447)
T ss_dssp SCHHHHH
T ss_pred CCHHHHH
Confidence 7655543
No 23
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=100.00 E-value=1.9e-34 Score=284.80 Aligned_cols=358 Identities=14% Similarity=0.071 Sum_probs=210.3
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCC---CCC---------------------c
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---GRT---------------------E 57 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~---~~~---------------------~ 57 (450)
.+++|+|+||+|++|++..+. ..++.++||++|++|+|||||+|+|+... +.. .
T Consensus 49 ~~~~v~i~~g~I~~vg~~~~~--~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~ 126 (468)
T 3lnp_A 49 IDHCLLIKDGIILAIEPQSSC--QIPATETLDLGQQVLMPGWVNAHGHAAMSLFRGLADDLPLMTWLQEHVWPAEAQHVD 126 (468)
T ss_dssp EEEEEEEETTEEEEEEETTTC--CCCEEEEEECCSEEEEECEEECSCCGGGGGGTTSSCSCCHHHHHHHTHHHHHHHHCS
T ss_pred cceEEEEECCEEEEEeCCccc--cCCCCeEEeCCCcEEEeCeechhhChhhhhhccCcCCCCHHHHHHHhhhhhhhccCC
Confidence 368899999999999987641 12467899999999999999999999432 110 0
Q ss_pred ccc----hHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCC---CccchHHHHHHHH
Q 013050 58 WEG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE---NAYNASALEALLN 130 (450)
Q Consensus 58 ~~~----~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 130 (450)
.+. ......+++++|||+++++. . ....+.........+.............. ..+..+...++.+
T Consensus 127 ~~~~~~~~~~~~~~~l~~GvTtv~d~~-~------~~~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (468)
T 3lnp_A 127 EHFVKQGTELAIAEMIQSGTTTFADMY-F------YPQQSGEAALAAGIRAVCFAPVLDFPTNYAQNADEYIRKAIECND 199 (468)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEECC-S------CHHHHHHHHHHHTCEEEEEEEECSSCCSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEcc-c------CHHHHHHHHHHcCCeEEEeccccCCCcccccCHHHHHHHHHHHHH
Confidence 011 11234567999999999984 1 12233332222222212222222111111 1122333333333
Q ss_pred c--CCc-----EEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCh-hhhhhhhhhccCcCCccccccccCC
Q 013050 131 A--GVL-----GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME-KGSERHVKLEDDTLDTRSYSTYLKT 202 (450)
Q Consensus 131 ~--g~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (450)
. +.. .++....+ ...+.++.+.+.++++.|+++|+++.+|+.+. ..+...+...+
T Consensus 200 ~~~~~~~~~~g~i~~~~~~---~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g-------------- 262 (468)
T 3lnp_A 200 RFNNHPMNEQGLVQIGFGP---HAPYTVSDEPLKEITMLSDQLDMPVQIHLHETDFEVSESLETFN-------------- 262 (468)
T ss_dssp HHHSCGGGTTCCEEEEEEE---CCTTTSCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHHHS--------------
T ss_pred HhhcCCcccCceEEEEEEc---CCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhC--------------
Confidence 1 222 23333322 22245788999999999999999999999543 22222221111
Q ss_pred CChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceE
Q 013050 203 RPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFK 282 (450)
Q Consensus 203 ~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 282 (450)
...++.+.+. + ..+.+..+.|+... ..+.++.+++.|+.+.. ||........
T Consensus 263 ----------~~~i~~~~~~--g--~l~~~~~~~H~~~~--~~~~~~~l~~~g~~v~~--~p~s~~~~~~---------- 314 (468)
T 3lnp_A 263 ----------KRPTQRLADI--G--FLNERVSCVHMTQV--DDGDIKILQKTGASIIH--CPESNLKLAS---------- 314 (468)
T ss_dssp ----------SCHHHHHHHT--T--CCSTTEEEEECCSC--CHHHHHHHHHHCCEEEE--CHHHHHHTTC----------
T ss_pred ----------CCHHHHHHHc--C--CCCCCeEEEeccCC--CHHHHHHHHhcCCEEEE--ChhhhhhcCC----------
Confidence 0012222221 1 11455667777652 23446666666755444 6654321110
Q ss_pred EcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhH-HHHHHHHH---HhcCCCHHHH
Q 013050 283 CAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFV-LPVTWSYG---RKYGVTLEQL 358 (450)
Q Consensus 283 ~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~---~~~gls~~~a 358 (450)
....+..+++.|+.+++|||+.+.+.... ..... +...+... ...++|++++
T Consensus 315 ---------~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~l~~~~a 370 (468)
T 3lnp_A 315 ---------GFCPIAKLSAANIPLAIGTDGAASNNDLD---------------MFSETKTAALLAKGVSQDASAIPAIEA 370 (468)
T ss_dssp ---------CCCCHHHHHHTTCCEEECCCCTTSSCCCC---------------HHHHHHHHHHHHHHHHTCTTSSCHHHH
T ss_pred ---------CCCCHHHHHHCCCeEEEECCCCcCCCCCC---------------HHHHHHHHHHHhhhccCCCCcCCHHHH
Confidence 01124567889999999999765421111 11111 11111111 1458999999
Q ss_pred HHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCce---EeeEEEEEEECCeEEEe
Q 013050 359 ASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRR---LSGKVLATISRGNLVYK 434 (450)
Q Consensus 359 l~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~v~v~G~~v~~ 434 (450)
++++|.|||+++|+ +++|+|++||.|||||+|.++....+.. +|+...+ ...+|..|||+|++||+
T Consensus 371 l~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~----------~~~~~~~~~~~~~~v~~v~v~G~~v~~ 440 (468)
T 3lnp_A 371 LTMATLGGARALGIDDITGSLKPGKAADIQAIDLNTLSSQPVF----------DPVSHMVYCTKSTQVSHVWVNGRCLLK 440 (468)
T ss_dssp HHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSCS----------CHHHHHHHSCCGGGEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHhCCCCCccccCCCCcCCEEEEeCCCCccCCcc----------CHHHHhhccCCCCCceEEEECCEEEEE
Confidence 99999999999999 6689999999999999998875433222 1221111 12579999999999999
Q ss_pred cCcccCCCCCccc
Q 013050 435 EGNHAPAACGSPI 447 (450)
Q Consensus 435 ~g~~~~~~~g~~~ 447 (450)
+|++++.+.++.+
T Consensus 441 ~g~~~~~d~~~~~ 453 (468)
T 3lnp_A 441 NGELTTLNEETLI 453 (468)
T ss_dssp TTEESSSCHHHHH
T ss_pred CCeECCCCHHHHH
Confidence 9999977655443
No 24
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=100.00 E-value=1.2e-34 Score=285.34 Aligned_cols=361 Identities=14% Similarity=0.098 Sum_probs=207.0
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcc-----cc-------h--------
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW-----EG-------F-------- 61 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~-----~~-------~-------- 61 (450)
.+++|+|+||+|++|++..+. .++.++||++|++|+|||||+|+|+........ .. +
T Consensus 21 ~~~~v~i~~g~I~~vg~~~~~---~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~~~~~~l~~~l~~~~~~~~~~~ 97 (456)
T 3ls9_A 21 EDADILIDGPKIVAVGKDLSD---RSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLERVTMASWLEGVLTRSAGWW 97 (456)
T ss_dssp EEEEEEEETTEEEEEESSCCC---TTCSEEEECTTEEEEECEEEEEECGGGGGGBTCGGGSSCCHHHHHHHHHHHHHHHH
T ss_pred ccceEEEECCEEEEeCCCCCC---CCCCeEEeCCCCEEecCeeecccccchhhhcccccCCCCCHHHHHHHhcccccccc
Confidence 468999999999999987432 246789999999999999999999954322100 00 0
Q ss_pred --------------HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEE-eccccC----------
Q 013050 62 --------------PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGF-WGGLVP---------- 116 (450)
Q Consensus 62 --------------~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------- 116 (450)
.....+++++|||++.+++ ...+.......+....+..... .++... .+....
T Consensus 98 ~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~a~~~~-g~r~~~~~~~~~~~~~~~~~~~~ 175 (456)
T 3ls9_A 98 RDGKFGPDVIREVARAVLLESLLGGITTVADQH-LFFPGATADSYIDATIEAATDL-GIRFHAARSSMTLGKSEGGFCDD 175 (456)
T ss_dssp HTTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEE-CCCCSSSCCTHHHHHHHHHHHH-TCEEEEEECCCCCCGGGTCSSCG
T ss_pred ccccCCHHHHHHHHHHHHHHHHhCCeeEEEecc-ccccCcccchhHHHHHHHHHHc-CCEEEEEccccccccccccCCcc
Confidence 1123457899999999995 3333221111222222222211 112111 111110
Q ss_pred ----CCccchHHHHHHHHc--C---CcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhc
Q 013050 117 ----ENAYNASALEALLNA--G---VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLE 187 (450)
Q Consensus 117 ----~~~~~~~~~~~~~~~--g---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~ 187 (450)
......+...++++. + ...+.....+ ...+.++.+.++++++.|+++|+++.+|+.+.......+...
T Consensus 176 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~ 252 (456)
T 3ls9_A 176 LFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGP---CGVPYDKPELFEAFAQMAADYDVRLHTHFYEPLDAGMSDHLY 252 (456)
T ss_dssp GGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECC---CCTTTSCHHHHHHHHHHHHHHTCEEEEEECCTTHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEec---CCCCCCCHHHHHHHHHHHHHCCCCEEEEeCCCchHHHHHHHh
Confidence 001123333444331 1 1122222222 222467899999999999999999999995543211111110
Q ss_pred cCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchh
Q 013050 188 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYL 267 (450)
Q Consensus 188 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~ 267 (450)
+ ....+.+.+.. ..+.+..+.|+... +.+.++.+++.|+.+. +||...
T Consensus 253 ~------------------------~~~~~~~~~~g----~~~~~~~i~H~~~~--~~~~~~~l~~~g~~~~--~~p~s~ 300 (456)
T 3ls9_A 253 G------------------------MTPWRFLEKHG----WASDRVWLAHAVVP--PREEIPEFADAGVAIA--HLIAPD 300 (456)
T ss_dssp S------------------------SCHHHHHHHTT----CSSTTEEEEECCSC--CGGGHHHHHHHTCEEE--ECHHHH
T ss_pred C------------------------CCHHHHHHHcC----CCCCCcEEEeccCC--CHHHHHHHHHcCCEEE--EChhHH
Confidence 0 00112222210 11344556666542 1124555555665554 477543
Q ss_pred cccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHH
Q 013050 268 AFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY 347 (450)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 347 (450)
..... ....+..+++.|+.+++|||+.+.+....+ ... +......
T Consensus 301 ~~l~~-------------------~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~---------------~~~-~~~~~~~ 345 (456)
T 3ls9_A 301 LRMGW-------------------GLAPIREYLDAGITVGFGTTGSASNDGGNL---------------LGD-LRLAALA 345 (456)
T ss_dssp HHTTC-------------------CCCCHHHHHHTTCEEEECCCCTTSSCCCCH---------------HHH-HHHHHHH
T ss_pred hhcCC-------------------CcchHHHHHHCCCcEEEECCCCccCCCCCH---------------HHH-HHHHHHH
Confidence 22110 011245668899999999997654321111 111 1111111
Q ss_pred HH-------hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceE--
Q 013050 348 GR-------KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRL-- 418 (450)
Q Consensus 348 ~~-------~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 418 (450)
.+ +.++|++++++++|.|||+++|++++|+|++||.|||||+|.++....+. .+|+...++
T Consensus 346 ~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~G~l~~G~~ADlvv~d~~~~~~~~~----------~~~~~~~~~~~ 415 (456)
T 3ls9_A 346 HRPADPNEPEKWLSARELLRMATRGSAECLGRPDLGVLEEGRAADIACWRLDGVDRVGV----------HDPAIGLIMTG 415 (456)
T ss_dssp TGGGSTTCGGGSCCHHHHHHHTTHHHHHHTTCTTSSCCSTTSBCCEEEEESCSGGGTTB----------SSHHHHHHHCC
T ss_pred hccccccccccCCCHHHHHHHHHHHHHHHhCCCCCCccCCCCccCEEEEeCCCCccCCC----------CChHHHhhccC
Confidence 11 11799999999999999999999449999999999999999886443221 223322222
Q ss_pred -eeEEEEEEECCeEEEecCcccCCCCCccc
Q 013050 419 -SGKVLATISRGNLVYKEGNHAPAACGSPI 447 (450)
Q Consensus 419 -~~~v~~v~v~G~~v~~~g~~~~~~~g~~~ 447 (450)
..+|..|||+|++||++|+++..+.++.+
T Consensus 416 ~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~ 445 (456)
T 3ls9_A 416 LSDRASLVVVNGQVLVENERPVLADLERIV 445 (456)
T ss_dssp SBCCCSEEEETTEEEEETTEESSSCHHHHH
T ss_pred CCCCeeEEEECCEEEEECCEeCCCCHHHHH
Confidence 24699999999999999999977655443
No 25
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=100.00 E-value=4.9e-35 Score=283.48 Aligned_cols=333 Identities=18% Similarity=0.138 Sum_probs=207.9
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCccc-c-----------hHHHHHHHH
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWE-G-----------FPSGTKAAA 69 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~-~-----------~~~~~~~~~ 69 (450)
.+++|+|+||||++|++..+. ...+.++||++|++|+|||||+|+|+.......+. . .....+.++
T Consensus 21 ~~~~v~I~~g~I~~vg~~~~~--~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 98 (403)
T 3gnh_A 21 DNPLVIVTDGRITSIGKKGDA--VPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSLEYSDRFWSVVQTANAKKTL 98 (403)
T ss_dssp ESEEEEEETTEEEEEEETTSC--CCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCSGGGGGSCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCEEEEEeCCCCC--CCCCCeEEECCCCEEcCCeEeeeEccccCcccchhhhhcCCHHHHHHHHHHHHHHHH
Confidence 468999999999999987531 12578999999999999999999999866432221 1 112346889
Q ss_pred hCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccc------------------------cCCCccchHHH
Q 013050 70 AGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGL------------------------VPENAYNASAL 125 (450)
Q Consensus 70 ~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~ 125 (450)
++|||++++++ +. ......+....+... ....++...+.. .....+..+.+
T Consensus 99 ~~GvTtv~d~~-~~---~~~~~~~~~~~~~g~-~~gpr~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (403)
T 3gnh_A 99 EAGFTTVRNVG-AA---DYDDVGLREAIDAGY-VPGPRIVTAAISFGATGGHCDSTFFPPSMDQKNPFNSDSPDEARKAV 173 (403)
T ss_dssp HTTEEEEEECC-CS---TTHHHHHHHHHHTTS-SCCCEEEECCSCEESTTSTTSCCSSCGGGCCCCTTCCCSHHHHHHHH
T ss_pred hCCeeEEEeCC-CC---ccccHHHHHHHHCCC-CCCCeEEecCcccccCCCCcccccCchhhcccCCcccCCHHHHHHHH
Confidence 99999999996 32 111222222222211 111232222111 01112335677
Q ss_pred HHHHHcCCcEEEEecccC-----CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCcccccccc
Q 013050 126 EALLNAGVLGLKSFMCPS-----GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYL 200 (450)
Q Consensus 126 ~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (450)
+++.+.|+..+|.+.... ...+.+..+.++++++++.|+++|+++.+|+....
T Consensus 174 ~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~---------------------- 231 (403)
T 3gnh_A 174 RTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGAS---------------------- 231 (403)
T ss_dssp HHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHH----------------------
T ss_pred HHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeCCHH----------------------
Confidence 788889999999986321 11234568999999999999999999999995432
Q ss_pred CCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCc
Q 013050 201 KTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTR 280 (450)
Q Consensus 201 ~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 280 (450)
.+..+++. +.. .+.|+.. -+.+.++.+++.|+.+.. ++............
T Consensus 232 ----------~i~~~~~~-----------g~~-~i~H~~~--~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~---- 281 (403)
T 3gnh_A 232 ----------GIREAVRA-----------GVD-TIEHASL--VDDEGIKLAVQKGAYFSM--DIYNTDYTQAEGKK---- 281 (403)
T ss_dssp ----------HHHHHHHT-----------TCS-EEEECTT--CCHHHHHHHHHHTCEEEC--CCSTHHHHHHHHHH----
T ss_pred ----------HHHHHHHh-----------CCC-EEecCCc--CCHHHHHHHHHCCCEEEe--eechhhhhhhhccc----
Confidence 13333322 322 4567764 234556666666764443 33211100000000
Q ss_pred eEEcCCCCC-------hhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCC
Q 013050 281 FKCAPPIRD-------AANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV 353 (450)
Q Consensus 281 ~~~~~~~~~-------~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gl 353 (450)
...|+... ......+..+++.|+.+++|||+..... +.. ...+..+.+.++
T Consensus 282 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~~~~---------------~~~------~~e~~~~~~~gl 339 (403)
T 3gnh_A 282 -NGVLEDNLRKDRDIGELQRENFRKALKAGVKMVYGTDAGIYPH---------------GDN------AKQFAVMVRYGA 339 (403)
T ss_dssp -HTCCHHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCCBTTBCT---------------TCG------GGHHHHHHHTTC
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCCCCC---------------Cch------HHHHHHHHHcCC
Confidence 00000000 0112345678889999999999632211 100 112234566799
Q ss_pred CHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEE
Q 013050 354 TLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLV 432 (450)
Q Consensus 354 s~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v 432 (450)
|++++|+++|.|||+++|+ +++|+|++||.|||||+|.|+..++ ....+|..||++|++|
T Consensus 340 ~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~p~~~~-------------------~~~~~v~~v~~~G~~v 400 (403)
T 3gnh_A 340 TPLQAIQSATLTAAEALGRSKDVGQVAVGRYGDMIAVAGDPLADV-------------------TTLEKPVFVMKGGAVV 400 (403)
T ss_dssp CHHHHHHHTTHHHHHHHTCTTTSSSCCTTSBCCEEEESSCTTTCG-------------------GGGGSCSEEEETTEEE
T ss_pred CHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCChhhCH-------------------HHhcCcCEEEECCEEE
Confidence 9999999999999999999 6799999999999999998753221 1113688999999999
Q ss_pred Ee
Q 013050 433 YK 434 (450)
Q Consensus 433 ~~ 434 (450)
+.
T Consensus 401 ~~ 402 (403)
T 3gnh_A 401 KA 402 (403)
T ss_dssp EC
T ss_pred eC
Confidence 74
No 26
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.1e-35 Score=288.17 Aligned_cols=359 Identities=15% Similarity=0.110 Sum_probs=210.0
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCC---------c---------------
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---------E--------------- 57 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~---------~--------------- 57 (450)
.+++|+|+||+|++|++..+. ...++.++||++|++|+|||||+|+|+....+. .
T Consensus 28 ~~~~v~i~~g~I~~ig~~~~~-~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~ 106 (451)
T 4dyk_A 28 RDHALGIRDGQIALVAPREQA-MRHGATEIRELPGMLLAPGLVNAHGHSAMSLFRGLADDLPLMTWLQDHIWPAEGQWVS 106 (451)
T ss_dssp ESEEEEEETTEEEEEEEHHHH-TTTCEEEEEEEEEEEEEECEEECCCCGGGGGGTTSSCSSCHHHHHHHTHHHHHHHHCS
T ss_pred eccEEEEECCEEEEEeCcccc-ccCCCCeEEeCCCCEEeecccchhhChhhHHhccCCCCCCHHHHHHHhhhhhhhccCC
Confidence 468999999999999976432 112467899999999999999999999432110 0
Q ss_pred ccchH----HHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCC---CccchHHHHHHHH
Q 013050 58 WEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE---NAYNASALEALLN 130 (450)
Q Consensus 58 ~~~~~----~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 130 (450)
.+++. ....+++++|||+++++. . ....+.........+.............. .....+...++.+
T Consensus 107 ~e~~~~~~~~~~~~~l~~GvTtv~d~~-~------~~~~~~~a~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (451)
T 4dyk_A 107 EDFIRDGTELAIAEQVKGGITCFSDMY-F------YPQAICGVVHDSGVRAQVAIPVLDFPIPGARDSAEAIRQGMALFD 179 (451)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEEEC-S------CHHHHHHHHHHHTCEEEEEEEECSSCBTTBSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEcc-c------CHHHHHHHHHHcCCeEEEEchhhCCCCccccCHHHHHHHHHHHHH
Confidence 01111 234467799999999985 1 12333333332222222222222111111 1122333344433
Q ss_pred --cCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCh-hhhhhhhhhccCcCCccccccccCCCChHH
Q 013050 131 --AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME-KGSERHVKLEDDTLDTRSYSTYLKTRPPSW 207 (450)
Q Consensus 131 --~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 207 (450)
.+...++....+ ...+.++.+.+.++++.|+++|+++.+|+.+. ..+...+...+
T Consensus 180 ~~~~~~~v~~~~~~---~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g------------------- 237 (451)
T 4dyk_A 180 DLKHHPRIRIAFGP---HAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAMERNG------------------- 237 (451)
T ss_dssp HTTTCSSEEEEEEE---CCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHS-------------------
T ss_pred HhcCCCceEEEEec---CCCCccCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhC-------------------
Confidence 133333333222 22245788999999999999999999999543 22222221111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCC
Q 013050 208 EEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPI 287 (450)
Q Consensus 208 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (450)
...++.+.+. + ..+.+..+.|+... +.+.++.+++.|+.+.. ||........ ..
T Consensus 238 -----~~~i~~~~~~--g--~~~~~~~~~H~~~~--~~~~~~~l~~~g~~v~~--~p~s~~~~~~----------~~--- 291 (451)
T 4dyk_A 238 -----ERPLARLHRL--G--LLGPRFQAVHMTQV--DNDDLAMLVETNSSVIH--CPESNLKLAS----------GF--- 291 (451)
T ss_dssp -----SCHHHHHHHT--T--CCSTTEEEEECCCC--CHHHHHHHHHHTCEEEE--CHHHHHHTTC----------CC---
T ss_pred -----CCHHHHHHHC--C--CCCCCeEEEECCCC--CHHHHHHHHHcCCEEEE--ChhhhhhccC----------Cc---
Confidence 0011222221 0 11445666777652 23446666666765544 6653321110 01
Q ss_pred CChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhH-HHHHHHHHH---hcCCCHHHHHHHHh
Q 013050 288 RDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFV-LPVTWSYGR---KYGVTLEQLASWWS 363 (450)
Q Consensus 288 ~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~---~~gls~~~al~~aT 363 (450)
..+..+++.|+.+++|||+.+.+...+ ..... ......... ..++|++++++++|
T Consensus 292 ------~~~~~~~~~Gv~v~lgtD~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T 350 (451)
T 4dyk_A 292 ------CPVEKLWQAGVNVAIGTDGAASNNDLD---------------LLGETRTAALLAKAVYGQATALDAHRALRMAT 350 (451)
T ss_dssp ------CCHHHHHHHTCCEEECCCCGGGSSCCC---------------HHHHHHHHHHHHHHHHTCTTSSCHHHHHHHHT
T ss_pred ------ccHHHHHhCCCeEEEECCCCccCCCCC---------------HHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHH
Confidence 124566788999999999764321111 11111 111112211 45899999999999
Q ss_pred hchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCce---EeeEEEEEEECCeEEEecCccc
Q 013050 364 ERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRR---LSGKVLATISRGNLVYKEGNHA 439 (450)
Q Consensus 364 ~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~v~v~G~~v~~~g~~~ 439 (450)
.|||+++|+ +++|+|++||.|||||+|.++....+. ++|+...+ ...+|..|||+|++||++|+++
T Consensus 351 ~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~----------~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 420 (451)
T 4dyk_A 351 LNGARALGLERLIGSLEAGKAADLVAFDLSGLAQQPV----------YDPVSQLIYASGRDCVRHVWVGGRQLLDDGRLL 420 (451)
T ss_dssp HHHHHHHTCTTTSSSCCTTSBCCEEEEECCSGGGCSC----------SCHHHHHHHHCCGGGEEEEEETTEEEEETTEES
T ss_pred HHHHHHcCCCCCCcCcCCCCcCCEEEEeCCCCccCCC----------CCHHHHhhccCCCCCccEEEECCEEEEECCEEC
Confidence 999999999 668999999999999999886432221 22332221 1247999999999999999999
Q ss_pred CCCCCccc
Q 013050 440 PAACGSPI 447 (450)
Q Consensus 440 ~~~~g~~~ 447 (450)
+.+.++.+
T Consensus 421 ~~d~~~~~ 428 (451)
T 4dyk_A 421 RHDEQRLI 428 (451)
T ss_dssp SSCHHHHH
T ss_pred cCCHHHHH
Confidence 77655543
No 27
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=100.00 E-value=2.8e-34 Score=280.08 Aligned_cols=342 Identities=16% Similarity=0.082 Sum_probs=210.9
Q ss_pred ceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCc-----ccc------hHHHHHHHHhC
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE-----WEG------FPSGTKAAAAG 71 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~-----~~~------~~~~~~~~~~~ 71 (450)
+++|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+....... .+. .....++++++
T Consensus 24 ~~~i~i~~g~I~~i~~~~~~~---~~~~~iD~~g~~v~PGliD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (426)
T 2r8c_A 24 GFEILIEDGFIREVSDKPIKS---SNAHVIDVKGKTIMPGLIDLHVHVVAIEFNLPRVATLPNVLVTLRAVPIMRAMLRR 100 (426)
T ss_dssp EEEEEEESSBEEEEESSCCCC---SSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEECCEEEEEcCCCCCC---CCCeEEECCCCEEcCCeEeeeeccccccCCchhhccCCHHHHHHHHHHHHHHHHhC
Confidence 578999999999999853322 4678999999999999999999998765421 111 11335677999
Q ss_pred CceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccc-----------------------------------cC
Q 013050 72 GITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGL-----------------------------------VP 116 (450)
Q Consensus 72 GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~ 116 (450)
|||++++++ ... ..+....+.... ...++...+.. ..
T Consensus 101 GvTtv~d~~-~~~------~~l~~~i~~~~~-~gpri~~~g~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (426)
T 2r8c_A 101 GFTTVRDAG-GAG------YPFKQAVESGLV-EGPRLFVSGRALSQTGGHADPRARSDYMPPDSPCGCCVRVGALGRVAD 172 (426)
T ss_dssp TEEEEEECS-SCC------HHHHHHHHTTSS-CCCEEEECCSEEECTTSTTCCCCCSSBCCCSCSSSSBCCTTCCEEECC
T ss_pred CeEEEEeCC-Cch------HHHHHHHHcCCC-CCCeEEecCCcccCCCCCcccccccccccccccccccccccccccccC
Confidence 999999996 221 123332222111 11222221111 01
Q ss_pred CCccchHHHHHHHHcCCcEEEEecccC-----CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcC
Q 013050 117 ENAYNASALEALLNAGVLGLKSFMCPS-----GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTL 191 (450)
Q Consensus 117 ~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~ 191 (450)
...+..+.++++.+.|+..+|.+.... ...+.+..+.+.++++++.|+++|++|.+|+....
T Consensus 173 ~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~------------- 239 (426)
T 2r8c_A 173 GVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAYTPA------------- 239 (426)
T ss_dssp SHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEECSHH-------------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeCChH-------------
Confidence 112234567777888999999876421 11223467899999999999999999999996432
Q ss_pred CccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccc
Q 013050 192 DTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSA 271 (450)
Q Consensus 192 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~ 271 (450)
.+..+++. +.. .+.|+.. -+.+.++.+++.|+.+.............
T Consensus 240 -------------------~i~~al~~-----------G~~-~i~H~~~--~~~~~~~~~~~~gv~~~pt~~~~~~~~~~ 286 (426)
T 2r8c_A 240 -------------------AIARAVRC-----------GVR-TIEHGNL--IDDETARLVAEHGAYVVPTLVTYDALASE 286 (426)
T ss_dssp -------------------HHHHHHHT-----------TCS-EEEECTT--CCHHHHHHHHHTTCEEECCTHHHHHHHHH
T ss_pred -------------------HHHHHHHc-----------CCC-EEecCCc--CCHHHHHHHHHcCCeEeechHHHHHHhhh
Confidence 23333332 322 3567765 34456777777776554322122111111
Q ss_pred cccCCCCCceEEcCCCC--ChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHH
Q 013050 272 EEIPDGDTRFKCAPPIR--DAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR 349 (450)
Q Consensus 272 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 349 (450)
... ..........++ .......+..+++.|+.+++|||+.+..... +...+....
T Consensus 287 ~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~~~~~~~---------------------~~~e~~~~~ 343 (426)
T 2r8c_A 287 GEK--YGLPPESIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEAQRL---------------------QSDEFRILA 343 (426)
T ss_dssp TTT--TTCCHHHHTTSTTTGGGHHHHHHHHHHTTCEECCCCCCCGGGGGG---------------------TTHHHHHHT
T ss_pred ccc--cCCCHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCcc---------------------hHHHHHHHH
Confidence 000 000000001111 1134556778889999999999975221100 011122333
Q ss_pred hcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEEC
Q 013050 350 KYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISR 428 (450)
Q Consensus 350 ~~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~ 428 (450)
+. +|++++|+++|.|||+++|+ +++|+|++||.|||||+|.|+..++. ..... ..+|..||++
T Consensus 344 ~~-l~~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvvld~~p~~~~~----~~~~~-----------~~~v~~v~~~ 407 (426)
T 2r8c_A 344 EV-LSPAEVIASATIVSAEVLGMQDKLGRIVPGAHADVLVVDGNPLKSVD----CLLGQ-----------GEHIPLVMKD 407 (426)
T ss_dssp TT-SCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCGG----GTCSS-----------STTCCEEEET
T ss_pred hc-CCHHHHHHHHHHHHHHHhCCCCCCccCCCCCcCCEEEECCChHhCHH----HHhCc-----------CCcceEEEEC
Confidence 44 99999999999999999999 67899999999999999988633221 00000 0368999999
Q ss_pred CeEEEecCcccC
Q 013050 429 GNLVYKEGNHAP 440 (450)
Q Consensus 429 G~~v~~~g~~~~ 440 (450)
|++|+++++..+
T Consensus 408 G~~v~~~~~~~~ 419 (426)
T 2r8c_A 408 GRLFVNELEGHE 419 (426)
T ss_dssp TEEEEETTC---
T ss_pred CEEEeccccccc
Confidence 999999987664
No 28
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.4e-34 Score=285.49 Aligned_cols=359 Identities=14% Similarity=0.071 Sum_probs=207.9
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCc---------c--------------
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE---------W-------------- 58 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~---------~-------------- 58 (450)
.+++|+|+||+|++|++..+.+..+++.++||++|++|+|||||+|+|+....... |
T Consensus 34 ~~~~v~I~~g~I~~vg~~~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~~~~~l~~~l~~~~~~~~~~~~~ 113 (472)
T 4dzh_A 34 EDHAVAVSNGVIVAVLPTADARVRFAPARTVSRPDAALMPGLVNAHTHNPMTLLRGVADDLPLMVWLQQHIWPVEAAVIG 113 (472)
T ss_dssp EEEEEEEETTEEEEEEEHHHHHHHEEEEEEEEEEEEEEEECEEEEEECGGGGGGTTSSCSCCHHHHHHHTHHHHHHHHCS
T ss_pred cceEEEEECCEEEEEeCchhhhhcCCCCeEEeCCCcEEEECccccccChhhHHhccccCCCCHHHHHHHhhhhhhhccCC
Confidence 46899999999999997643321113568999999999999999999996532110 0
Q ss_pred -cch----HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCC---CccchHHHHHHHH
Q 013050 59 -EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE---NAYNASALEALLN 130 (450)
Q Consensus 59 -~~~----~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 130 (450)
+.. .....+++++|||+++++. . ..............+..+........... ..+..+...++.+
T Consensus 114 ~e~~~~~~~~~~~~~l~~GvTtv~d~~-~------~~~~~~~a~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (472)
T 4dzh_A 114 PEFVADGTTLAIAEMLRGGTTCVNENY-F------FADVQAAVYKQHGFRALVGAVIIDFPTAWASSDDEYFARAGELHD 186 (472)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEEEC-S------CHHHHHHHHHHTTCEEEEEEEECSSCCSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEcc-c------CHHHHHHHHHHhCCeEEEEecccCCCcccccCHHHHHHHHHHHHH
Confidence 001 1123458999999999985 1 12222222222211111222222110011 1122333333433
Q ss_pred c--CCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCh-hhhhhhhhhccCcCCccccccccCCCChHH
Q 013050 131 A--GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME-KGSERHVKLEDDTLDTRSYSTYLKTRPPSW 207 (450)
Q Consensus 131 ~--g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 207 (450)
. +...++....+ .....++.+.++++++.|+++|+++.+|+.+. ..+...+...+
T Consensus 187 ~~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~~g------------------- 244 (472)
T 4dzh_A 187 QWRDDPLISTAFAP---HAPYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVAQYG------------------- 244 (472)
T ss_dssp HHTTCSSEEEEEEE---CCTTTSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHS-------------------
T ss_pred HhCCCCceEEEEec---CCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhC-------------------
Confidence 1 22223332222 22235788999999999999999999999543 22222221111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCC
Q 013050 208 EEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPI 287 (450)
Q Consensus 208 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (450)
...++.+.++.. .+.+..+.|+... +.+.++.+++.|+.+.. ||........
T Consensus 245 -~~~i~~~~~~g~--------~~~~~~~~H~~~l--~~~~i~~l~~~g~~v~~--~p~s~~~~~~--------------- 296 (472)
T 4dzh_A 245 -QRPLARLDRLGL--------VNDRLIAVHMTQL--TEAEIHLCAERGVSVVH--CPESNLKLAS--------------- 296 (472)
T ss_dssp -SCHHHHHHHHTC--------CSTTEEEEECCSC--CHHHHHHHHHHTCEEEE--CHHHHHHTTC---------------
T ss_pred -CCHHHHHHHcCC--------CCCCeEEEeccCC--CHHHHHHHHHcCCEEEE--ChHHHHhcCC---------------
Confidence 000111221111 1445667777652 23446666666765544 6654322110
Q ss_pred CChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhh-HHHHHHHHH---HhcCCCHHHHHHHHh
Q 013050 288 RDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQF-VLPVTWSYG---RKYGVTLEQLASWWS 363 (450)
Q Consensus 288 ~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~---~~~gls~~~al~~aT 363 (450)
....+..+++.|+.+++|||+.+.+...++ ... .+....... ...++|++++++++|
T Consensus 297 ----~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~---------------~~~~~~a~~~~~~~~~~~~~l~~~~al~~~T 357 (472)
T 4dzh_A 297 ----GFCPACALQRASVNLAIGTDGCASNNDLDM---------------FSENRTAAILAKAVANDATALDAATTLRAAT 357 (472)
T ss_dssp ----CCCCHHHHHHTTCEEEECCCCTTSSCCCCH---------------HHHHHHHHHHHHHHHTCTTSSCHHHHHHHHT
T ss_pred ----CCccHHHHHHCCCCEEEECCCCcCCCCCCH---------------HHHHHHHHHHhhhhcCCCCcCCHHHHHHHHH
Confidence 011245678899999999997643221111 111 111111111 124799999999999
Q ss_pred hchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCce---EeeEEEEEEECCeEEEecCccc
Q 013050 364 ERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRR---LSGKVLATISRGNLVYKEGNHA 439 (450)
Q Consensus 364 ~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~v~v~G~~v~~~g~~~ 439 (450)
.|||+++|+ +++|+|++||.|||||+|.++....+. ++|+..++ ...+|..|||+|++||++|+++
T Consensus 358 ~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~----------~~~~~~l~~~~~~~~V~~v~v~G~~v~~~g~~~ 427 (472)
T 4dzh_A 358 LGGARALGFGDRIGSIEVGKQADLVCVDLSALETQPL----------HHVLSQLIYAAGRHQVTDVWIAGKPKLVQRELI 427 (472)
T ss_dssp HHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSC----------SCHHHHHHHTCCGGGEEEEEETTEEEEETTEET
T ss_pred HHHHHHcCCCCCCcccCCCCcCCEEEEcCCCCccCCc----------cCHHHHHhhcCCCCCceEEEECCEEEEECCEEC
Confidence 999999999 668999999999999999886442221 22332222 1247999999999999999998
Q ss_pred CCCCCcc
Q 013050 440 PAACGSP 446 (450)
Q Consensus 440 ~~~~g~~ 446 (450)
+.+..+.
T Consensus 428 ~~d~~~i 434 (472)
T 4dzh_A 428 DMDTAAL 434 (472)
T ss_dssp TCCHHHH
T ss_pred cCCHHHH
Confidence 7665443
No 29
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=100.00 E-value=3.1e-34 Score=279.64 Aligned_cols=338 Identities=16% Similarity=0.086 Sum_probs=204.7
Q ss_pred ceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCc-----ccc------hHHHHHHHHhC
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE-----WEG------FPSGTKAAAAG 71 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~-----~~~------~~~~~~~~~~~ 71 (450)
+++|+|+||||++|++....+ .+.++||++|++|+|||||+|+|+....... .+. .....++++++
T Consensus 24 ~~~v~I~~g~I~~vg~~~~~~---~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (423)
T 3feq_A 24 HHHVVIDGERIVEVTDRPVDL---PNAQAIDVRGKTVMPGFIDCHVHVLASNANLGVNATQPNILAAIRSLPILDAMLSR 100 (423)
T ss_dssp EEEEEEETTEEEEEECSCCCC---SSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHHHSCHHHHHHTHHHHHHHHHHT
T ss_pred CceEEEECCEEEEecCCCCCC---CCCeEEeCCCCEECCCeeeeEeeecccCCChhhhhcCCHHHHHHHHHHHHHHHHhC
Confidence 579999999999999854322 4779999999999999999999998765411 111 12345677999
Q ss_pred CceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccc--------------------------------cCCCc
Q 013050 72 GITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGL--------------------------------VPENA 119 (450)
Q Consensus 72 GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~ 119 (450)
|||++++++ ... ..+....+.... ...++...+.. .....
T Consensus 101 GvTtv~d~~-~~~------~~l~~~~~~~~~-~g~r~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (423)
T 3feq_A 101 GFTSVRDAG-GAD------WSLMQAVETGLV-SGPRIFPSGKALSQTGGHGDFRPRGDLLEPCSCCFRTGAIARVVDGVE 172 (423)
T ss_dssp TEEEEEECS-SCC------HHHHHHHHTTSS-CSCEEECCCSEEECTTSTTCCCCC---CCCCCSSCCTTCSEEECCSHH
T ss_pred CeEEEEeCC-Cch------HHHHHHHHcCCC-CCCeEEecCcccccCCCCccccccccccccccccccccccceecCCHH
Confidence 999999996 221 123332222111 11222111110 11112
Q ss_pred cchHHHHHHHHcCCcEEEEecccC-----CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCcc
Q 013050 120 YNASALEALLNAGVLGLKSFMCPS-----GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTR 194 (450)
Q Consensus 120 ~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~ 194 (450)
+..+.++++.+.|+..+|.+.... ...+...++.+.++++++.|+++|+++.+|+....
T Consensus 173 ~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~---------------- 236 (423)
T 3feq_A 173 GVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAYTGR---------------- 236 (423)
T ss_dssp HHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEEEHH----------------
T ss_pred HHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeCChH----------------
Confidence 334667777888999999876421 11223468899999999999999999999995322
Q ss_pred ccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhccccccc
Q 013050 195 SYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEI 274 (450)
Q Consensus 195 ~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~ 274 (450)
.+..+++... ..-.|+.++. .+.++.+++.|+.+...............
T Consensus 237 ----------------~i~~~l~~g~---------~~i~H~~~~~-----~~~~~~l~~~gv~~~pt~~~~~~~~~~~~- 285 (423)
T 3feq_A 237 ----------------AIARAVRCGV---------RTIEHGNLVD-----EAAAKLMHEHGAFVVPTLVTYDALAKHGA- 285 (423)
T ss_dssp ----------------HHHHHHHHTC---------CEEEEEEECC-----HHHHHHHHHHTCEEECCTHHHHHHHHHTG-
T ss_pred ----------------HHHHHHHcCC---------CEEeccCcCC-----HHHHHHHHHCCCccccchHHHHHHHhccc-
Confidence 2344444211 2223333332 23555566666544332112111111000
Q ss_pred CCCCCceEEcCCCCCh------hhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHH
Q 013050 275 PDGDTRFKCAPPIRDA------ANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG 348 (450)
Q Consensus 275 ~~~~~~~~~~~~~~~~------~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 348 (450)
....+|..... .....+..+++.|+.+++|||+...... . +...+...
T Consensus 286 -----~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~gTD~~~~~~~-~--------------------~~~e~~~~ 339 (423)
T 3feq_A 286 -----EFGMPPESVAKVASVQQKGRESLEIYANAGVKMGFGSDLLGEMHA-F--------------------QSGEFRIR 339 (423)
T ss_dssp -----GGTCCTTTSSTHHHHHHHHHHHHHHHHHHTCCBCCCCCCCGGGGG-G--------------------TTHHHHHH
T ss_pred -----ccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCc-c--------------------hHHHHHHH
Confidence 00111211111 1344567788899999999997421110 0 01122233
Q ss_pred HhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEE
Q 013050 349 RKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATIS 427 (450)
Q Consensus 349 ~~~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v 427 (450)
.+. +|++++++++|.|||+++|+ +++|+|++||.|||||+|.|+..++. ..... ..+|+.||+
T Consensus 340 ~~~-ls~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~p~~~~~----~~~~~-----------~~~v~~v~~ 403 (423)
T 3feq_A 340 AEV-LGNLEALRSATTVAAEIVNMQGQLGVIAVGAIADLVVLDGNPLEDIG----VVADE-----------GARVEYVLQ 403 (423)
T ss_dssp HTT-SCHHHHHHTTTHHHHHHTTCBTTBSSCCTTSBCCEEEESSCTTTCGG----GTSSS-----------TTSEEEEEE
T ss_pred Hhh-CCHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCChhhCHH----HHhcc-----------CCCceEEEE
Confidence 444 99999999999999999999 67899999999999999988533221 00000 037999999
Q ss_pred CCeEEEecCcccC
Q 013050 428 RGNLVYKEGNHAP 440 (450)
Q Consensus 428 ~G~~v~~~g~~~~ 440 (450)
+|++|+++++..+
T Consensus 404 ~G~~v~~~~~~~~ 416 (423)
T 3feq_A 404 RGTLVKRQAAGRE 416 (423)
T ss_dssp TTEEEEEC-----
T ss_pred CCEEEeCCccccc
Confidence 9999999988764
No 30
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=1.9e-33 Score=279.37 Aligned_cols=360 Identities=17% Similarity=0.195 Sum_probs=202.7
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCC---C--------CCcc------------
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---G--------RTEW------------ 58 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~---~--------~~~~------------ 58 (450)
..++|+|+||||++|++..+ . ++.++||++|++|+|||||+|+|+..+ + +..|
T Consensus 35 ~~~~v~I~~g~I~~vg~~~~-~---~~~~viD~~G~~v~PG~ID~H~H~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~ 110 (492)
T 2paj_A 35 PGPDIRIVGDTIDAIGALAP-R---PGETIVDATDCVIYPAWVNTHHHLFQSLLKGEPAGLDATLTPWLAATPYRFRALF 110 (492)
T ss_dssp CCCCEEEETTEEEEESSCCC-C---TTCEEEECBTCEEEECEECCCCCGGGGGCCSCC-----------------CGGGC
T ss_pred cccEEEEECCEEEEEcCCCC-C---CCCeEEECCCcEEeeCccccccChhhHhhcCccCCCCCCHHHHHHhcccchhhcC
Confidence 35789999999999997643 1 356899999999999999999998654 1 1111
Q ss_pred --cchHHH----HHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCC--------------
Q 013050 59 --EGFPSG----TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN-------------- 118 (450)
Q Consensus 59 --~~~~~~----~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 118 (450)
+++... .++++++|||++++++ ...+.......+....+..... .++...........
T Consensus 111 ~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~-g~r~~~~~~~~~~~~~~~g~~~~~~~~~ 188 (492)
T 2paj_A 111 DERRFRLAARIGLIELARSGCATVADHN-YVYYPGMPFDSSAILFEEAEKL-GLRFVLLRGGATQTRQLEADLPTALRPE 188 (492)
T ss_dssp CHHHHHHHHHHHHHHHHTTTEEEEEECC-CCCCTTCSSCHHHHHHHHHHHT-TCEEEEEECCCSCCCSCSTTSCGGGCCC
T ss_pred CHHHHHHHHHHHHHHHHhcCcEEEEech-hhcccccccchHHHHHHHHHHc-CCEEEEEchhhcccccccccCCcccccc
Confidence 223333 3348999999999996 3333211122233333322222 23332221111100
Q ss_pred --ccchHHHHHHHHc--CC---cEEEEecccCCCCCC-CCCCHHHHHHHHHHHHhcCCcEEEecCChhh-hhhhhhhccC
Q 013050 119 --AYNASALEALLNA--GV---LGLKSFMCPSGINDF-PMTNASHIKEGLSVLARYKRPLLVHAEMEKG-SERHVKLEDD 189 (450)
Q Consensus 119 --~~~~~~~~~~~~~--g~---~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~-~~~~~~~~~~ 189 (450)
.+..+.+.++.+. +. ..++.+..+ .+. +..+.+.+.++++.|+++|+++.+|+.+... +...+...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~-- 263 (492)
T 2paj_A 189 TLDAYVADIERLAARYHDASPRAMRRVVMAP---TTVLYSISPREMRETAAVARRLGLRMHSHLSETVGYQDSAYSMY-- 263 (492)
T ss_dssp CHHHHHHHHHHHHHHTCCCSTTCSEEEEECC---TTTTTSSCHHHHHHHHHHHHHTTCEEEEECC---------------
T ss_pred CHHHHHHHHHHHHHHhccCCCCCceEEEEec---ccCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCChHHHHHHHHHc--
Confidence 1123444555542 11 123433333 222 3578899999999999999999999965321 11111100
Q ss_pred cCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcc
Q 013050 190 TLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAF 269 (450)
Q Consensus 190 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 269 (450)
+.. .++.+... + ..+.+..+.|+... +.+.++.+++.|+ .+.+||.....
T Consensus 264 ------------g~~----------~~~~~~~~--g--~~~~~~~i~H~~~~--~~~~i~~l~~~gv--~v~~~p~~~~~ 313 (492)
T 2paj_A 264 ------------GKS----------PVAFCGEH--D--WLGSDVWYAHLVKV--DADEIALLAQTGT--GVAHCPQSNGR 313 (492)
T ss_dssp ------------CCC----------HHHHHHHT--T--CCSTTEEEESCCSC--CHHHHHHHHHHTC--EEEECHHHHHC
T ss_pred ------------CCC----------HHHHHHHC--C--CCCCCcEEEEEecC--CHHHHHHHHHcCC--EEEECchhhcc
Confidence 000 11111211 0 01234445666542 1224666666664 44457653211
Q ss_pred cccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhH-HHHHHHHH
Q 013050 270 SAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFV-LPVTWSYG 348 (450)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~ 348 (450)
. + ...+|++. +++.|+.+++|||+.+.+....+ .... ....+...
T Consensus 314 l-------~---~~~~p~~~---------~~~~Gv~v~lgTD~~~~~~~~~~---------------~~~~~~~~~~~~~ 359 (492)
T 2paj_A 314 L-------G---SGICPVRE---------MADAGVPVSIGVDGAASNEAADM---------------ISEVHMTWLAQRA 359 (492)
T ss_dssp C---------------CCTT---------HHHHTCCEEECCCHHHHCSCCSH---------------HHHHHHHHHHHHH
T ss_pred c-------C---CCCCCHHH---------HHHCCCcEEEeCCCCCCCCCCCH---------------HHHHHHHHHHhhh
Confidence 0 0 12234443 47789999999997432111000 0000 00001110
Q ss_pred -----------------HhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCcc
Q 013050 349 -----------------RKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSIS 411 (450)
Q Consensus 349 -----------------~~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~ 411 (450)
...++|++++++++|.|||+++|++++|+|++||+|||||+|.++.+..+ . ++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~ls~~~al~~aT~~~A~~lgl~~~Gsl~~Gk~ADlvvld~~~~~~~~---------~-~~ 429 (492)
T 2paj_A 360 RLGMLAQPAYRGGSFEGGAGAASIAEVIHWGTAGGARVMGLDEVGKVAVGYAADIAVYRLDDPRYFG---------L-HD 429 (492)
T ss_dssp TC-------------------CCHHHHHHHHTHHHHHHHTCTTSSCCSTTSBCCEEEEECCSGGGTT---------C-SS
T ss_pred hcccccccccccccccCCcCcCCHHHHHHHHHHHHHHHhCCCCccccCCCCccCEEEEeCCCcccCC---------c-cC
Confidence 23469999999999999999999966899999999999999988643311 1 34
Q ss_pred ccCCceE---eeEEEEEEECCeEEEecCcccCCCCCcc
Q 013050 412 AYLGRRL---SGKVLATISRGNLVYKEGNHAPAACGSP 446 (450)
Q Consensus 412 ~~~~~~~---~~~v~~v~v~G~~v~~~g~~~~~~~g~~ 446 (450)
|+.++.+ ..+|..||++|++||++|+++..+.++.
T Consensus 430 p~~~i~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~ 467 (492)
T 2paj_A 430 PAIGPVASGGRPSVMALFSAGKRVVVDDLIEGVDIKEL 467 (492)
T ss_dssp GGGHHHHSCSCCEEEEEEETTEEEEETTBCTTCCHHHH
T ss_pred HHHHHHhcCCCCCceEEEECCEEEEECCeeccCCHHHH
Confidence 5544332 1479999999999999999987665544
No 31
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=100.00 E-value=5.1e-34 Score=274.00 Aligned_cols=337 Identities=19% Similarity=0.207 Sum_probs=206.9
Q ss_pred ceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCC-CEEeccceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCC
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGE-AVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPL 81 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g-~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~ 81 (450)
+++|+|+||||++|++.... ++.++||++| ++|+|||||+|+|+..+....++ ...+.++++|||++++++
T Consensus 19 ~~~v~i~~g~I~~ig~~~~~----~~~~~iD~~g~~~v~PG~ID~H~H~~~~~~~~~~---~~~~~~~~~GvTtv~d~~- 90 (379)
T 2ics_A 19 PVEIAIKEKKIAAVAATISG----SAKETIHLEPGTYVSAGWIDDHVHCFEKMALYYD---YPDEIGVKKGVTTVIDAG- 90 (379)
T ss_dssp EEEEEEETTEEEEEESCCCC----CEEEEEECCTTCEEEECEEEEEECCCTTSSSSCC---CHHHHTGGGTEEEEEEES-
T ss_pred cceEEEECCEEEEecCCCCC----CCCcEEeCCCCEEEccCEEEeccccCccCccccC---chhhhHhhCceeEEEcCC-
Confidence 47899999999999875321 2457999999 99999999999999876544443 345678999999999975
Q ss_pred CCCCCCCcHHHHHHHHHHHhcCCceE-EE---EeccccC-CC----ccchHHHHHHHH---cCCcEEEEecccCCCCCCC
Q 013050 82 NSDPSTISTETLKLKVDAAEKRIYVD-VG---FWGGLVP-EN----AYNASALEALLN---AGVLGLKSFMCPSGINDFP 149 (450)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~-~~----~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~ 149 (450)
+.. ....+.+....+.... .+. +. ..+.... .. ....+.+.++++ .++.+++.+..+.. ..
T Consensus 91 ~~~--~~~~~~~~~~~~~~~~--~i~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~ 163 (379)
T 2ics_A 91 TTG--AENIHEFYDLAQQAKT--NVFGLVNISKWGIVAQDELADLSKVQASLVKKAIQELPDFVVGIKARMSRTV---IG 163 (379)
T ss_dssp SSC--TTTHHHHHHHHHTSSS--EEEEEEESSTTTTSSSCTTSSGGGCCHHHHHHHHHHCTTTEEEEEEEESHHH---HT
T ss_pred CCC--ccCHHHHHHHHHhhcc--cEEEEccccccCCCCHHHHHHHHHHHHHHHHHHHHhhhCcceEEEEeccccc---cc
Confidence 322 2334444333332211 111 11 1121111 11 112355666655 47778877654311 12
Q ss_pred CCCHHHHHHHHHHHHh-cCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhh-ccCCC
Q 013050 150 MTNASHIKEGLSVLAR-YKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDT-RTDGP 227 (450)
Q Consensus 150 ~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~-~~~~~ 227 (450)
..+.+.+.+.++.|++ +|+++.+|+...... .+.+.+..+.. .....
T Consensus 164 ~~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~-------------------------------~~~~~~~~~~g~~~~H~ 212 (379)
T 2ics_A 164 DNGITPLELAKQIQQENQEIPLMVHIGSAPPH-------------------------------LDEILALMEKGDVLTHC 212 (379)
T ss_dssp TCTTHHHHHHHHHHHTTTTCCEEEEECSSSSC-------------------------------HHHHHHHCCTTCEEEST
T ss_pred cchHHHHHHHHHHHHHhcCCeEEEeCCCCcch-------------------------------HHHHHHHhhcCCeeeec
Confidence 3567888999999999 999999999542110 11222222110 00000
Q ss_pred CCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcC-Cee
Q 013050 228 AEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG-HID 306 (450)
Q Consensus 228 ~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~ 306 (450)
+.+.+.|+.|.++. ...+.++.+++.|+ ++.++|.... .....++++++.| +.+
T Consensus 213 ~~~~~~~~~~~s~~-~~~~~~~~~~~~g~--~~~~~p~~~~----------------------~~~~~~~~~~~~G~~~~ 267 (379)
T 2ics_A 213 FNGKENGILDQATD-KIKDFAWQAYNKGV--VFDIGHGTDS----------------------FNFHVAETALREGMKAA 267 (379)
T ss_dssp TCCSTTSSEETTTT-EECHHHHHHHHTTC--EEECCCTTTS----------------------CCHHHHHHHHHTTCCCS
T ss_pred cCCCccchhhccCH-HHHHHHHHHHHcCC--EEEecCCCCC----------------------cCHHHHHHHHHcCCCcc
Confidence 01122233343232 34467777777774 4444553210 1234467778888 888
Q ss_pred EEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccE
Q 013050 307 MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADL 386 (450)
Q Consensus 307 ~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADl 386 (450)
+++||+.+.+. + .++ ...+...+..+.+.++|++++++++|.|||++||++++|+|+|||+|||
T Consensus 268 ~l~TD~~~~~~----~-~~~-----------~~~~~~~l~~~~~~~ls~~~~~~~~T~n~A~~lgl~~~G~l~~G~~ADl 331 (379)
T 2ics_A 268 SISTDIYIRNR----E-NGP-----------VYDLATTMEKLRVVGYDWPEIIEKVTKAPAENFHLTQKGTLEIGKDADL 331 (379)
T ss_dssp BCCCCBCHHHH----H-SSS-----------CCCHHHHHHHHHHHTCCHHHHHHTTTHHHHHHTTCTTSSSCCTTSBCCE
T ss_pred eEeccCcccCC----C-CCc-----------HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCcCCCCCCccCE
Confidence 99999642210 0 000 1123344444445689999999999999999999944999999999999
Q ss_pred EEEeCCCceeeCCCCCcccCCCCccccCCceEee----EEEEEEECCeEEEecCcc
Q 013050 387 VVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSG----KVLATISRGNLVYKEGNH 438 (450)
Q Consensus 387 vv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~v~v~G~~v~~~g~~ 438 (450)
||+|.+..+.. .+++.|..+.+ +|..|||+|++||++|.+
T Consensus 332 vv~d~~~~~~~------------~~~~~g~~~~~~~~~~v~~t~v~G~~v~~~~~~ 375 (379)
T 2ics_A 332 TIFTIQAEEKT------------LTDSNGLTRVAKEQIRPIKTIIGGQIYDNEGHH 375 (379)
T ss_dssp EEEEEEEEEEE------------EECTTSCEEEEEEEEEEEEEEETTEEEEC----
T ss_pred EEEecccccce------------eecCCCCEEEeeeeeeeEEEEECCEEEecCCcc
Confidence 99996543221 45566777777 899999999999999965
No 32
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=100.00 E-value=1.1e-31 Score=258.40 Aligned_cols=343 Identities=15% Similarity=0.154 Sum_probs=212.1
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCC-CcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCC
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKT-GQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMP 80 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~-~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~ 80 (450)
.+++|+|+||+|++|++...... .+ .++||++|++|+|||||+|+|+..+............+.++++||||+++++
T Consensus 23 ~~~~v~I~~g~I~~Ig~~~~~~~--~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~ 100 (386)
T 2vun_A 23 QADTIVVEDGLIAAIGGEELMKD--AGDATIIDAAGSTVTPGLLDTHVHVSGGDYAPRQKTMDFISSALHGGVTTMISAG 100 (386)
T ss_dssp CCSEEEEETTEEEEEESGGGGTT--CTTCEEEECTTCEEEECEEEEEECCCSTTEEGGGTEESHHHHHHTTTEEEEEECC
T ss_pred ccceEEEECCEEEEecCccccCC--CCCceEEcCCCCEEccceeeccccccCCCcChhHHHHHHHHHHHhCCceEEEecc
Confidence 35799999999999987322111 24 5799999999999999999999753211000112368899999999999985
Q ss_pred CC----CCCCCCcHHHHH--HHHHHHh---cC-CceEEEEeccccCCCccchHHHHHHHHcCCcEEEEecccCCCCCCCC
Q 013050 81 LN----SDPSTISTETLK--LKVDAAE---KR-IYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPM 150 (450)
Q Consensus 81 ~~----~~~~~~~~~~~~--~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 150 (450)
+ ..+ .....+. ....... .. ....+. .+..........+.++++.+.|+..++.+... ..
T Consensus 101 -~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~------~~ 170 (386)
T 2vun_A 101 -SPHFPGRP--KDAAGTKALAITLSKSYYNARPAGVKVH-GGAVILEKGLTEEDFIEMKKEGVWIVGEVGLG------TI 170 (386)
T ss_dssp -CTTSTTCC--CSHHHHHHHHHHHHHHHHHCCGGGCEEE-CCEECCCTTCCHHHHHHHHHTTCCEEEEETSS------SC
T ss_pred -ccccCCCh--hhHHHHHHHHHHhhcccccccccceeec-cCcccccCCcCHHHHHHHHHhCCCeEEEeecC------CC
Confidence 2 222 2222232 1111111 10 001111 11100111122467888888899888886421 13
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCC
Q 013050 151 TNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEG 230 (450)
Q Consensus 151 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (450)
++++.+.++++.|+++|+++.+|+++..... ... +.+..+. +. +
T Consensus 171 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~---------~~~----------------~~i~~~~----~~-------G 214 (386)
T 2vun_A 171 KNPEDAAPMVEWAHKHGFKVQMHTGGTSIPG---------SST----------------VTADDVI----KT-------K 214 (386)
T ss_dssp CSHHHHHHHHHHHHHTTCEEEEECSCCSCST---------TCS----------------CCHHHHH----HH-------C
T ss_pred CCHHHHHHHHHHHHHCCCeEEEecCCccccc---------cCH----------------HHHHHHH----Hc-------C
Confidence 5789999999999999999999996432100 000 0122222 22 4
Q ss_pred ceEEEEecCChh--HHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCC--ee
Q 013050 231 AHLHIVHLSDAS--SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH--ID 306 (450)
Q Consensus 231 ~~~~~~h~~~~~--~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~--~~ 306 (450)
.+ .+.|+...+ .+.+.++.+++.|+.+.. ++. . + . .......++++++.|+ .+
T Consensus 215 ~~-~i~H~~~~~~~~~~~~~~~~~~~g~~vl~--~~~----~-------g-------~--~~~~~~~~~~~~~~g~~d~v 271 (386)
T 2vun_A 215 PD-VVSHINGGPTAISVQEVDRIMDETDFAME--IVQ----C-------G-------N--PKIADYVARRAAEKGQLGRV 271 (386)
T ss_dssp CS-EEETTTCSSSCCCHHHHHHHHHHCCCEEE--EES----S-------S-------C--HHHHHHHHHHHHHHTCGGGE
T ss_pred CC-EEEEccCCCCCCCHHHHHHHHHcCCeEEE--ecc----C-------C-------c--ccccHHHHHHHHHcCCCcee
Confidence 44 368876510 234566677667765511 110 0 0 0 2344567788999999 89
Q ss_pred EEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccE
Q 013050 307 MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADL 386 (450)
Q Consensus 307 ~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADl 386 (450)
+++||+ |... ...+.| .+...+..+.+.++|++++++++|.|||+++|+ +.|+|++||.|||
T Consensus 272 ~lgTD~-p~~~----------~~~~~g------~~~~~~~~~~~~~ls~~~~~~~~T~n~A~~lgl-~~G~i~~G~~ADl 333 (386)
T 2vun_A 272 IFGNDA-PSGT----------GLIPLG------ILRNMCQIASMSDIDPEVAVCMATGNSTAVYGL-NTGVIAPGKEADL 333 (386)
T ss_dssp EEECCB-SBTT----------BBCTTH------HHHHHHHHHHHSCCCHHHHHHHHTHHHHHHHTC-SCSSCSTTSBCCE
T ss_pred EEecCC-CCCC----------CCCcch------hHHHHHHHHhhcCCCHHHHHHHHhHHHHHHcCC-CceeeCCCCeeCE
Confidence 999997 3110 000111 122233344567999999999999999999999 7999999999999
Q ss_pred EEEeCCCceeeCCCCCcccCCCCccccCCceE--eeEEEEEEECCeEEEecCcccCCCCCcc
Q 013050 387 VVWEPEAEFELDNDHPVHMKHPSISAYLGRRL--SGKVLATISRGNLVYKEGNHAPAACGSP 446 (450)
Q Consensus 387 vv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~v~v~G~~v~~~g~~~~~~~g~~ 446 (450)
||+|.++. +. . ..++..... ..+|..||++|++|+++|+..+ ..||.
T Consensus 334 vv~d~~~~-~~-~----------~~~~~~~~~~~~~~v~~v~v~G~~v~~~~~~~~-~~~~~ 382 (386)
T 2vun_A 334 IIMDTPLG-SV-A----------EDAMGAIAAGDIPGISVVLIDGEAVVTKSRNTP-PAKRA 382 (386)
T ss_dssp EEEECBTT-CS-C----------SSHHHHHHHTCCCEEEEEEETTEEEESSCSSSC-CBSSC
T ss_pred EEECCCcc-cc-c----------chhHHHhhccCCCceeEEEECCEEEeecCcCCC-CCCcc
Confidence 99998752 11 1 122221111 2489999999999999999886 33443
No 33
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=100.00 E-value=2e-32 Score=265.14 Aligned_cols=336 Identities=15% Similarity=0.108 Sum_probs=202.6
Q ss_pred eeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCC----------Cc-c--------------
Q 013050 4 RAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR----------TE-W-------------- 58 (450)
Q Consensus 4 ~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~----------~~-~-------------- 58 (450)
++|+|+||||++|++..+. +..++||++|++|+|||||+|+|+..... .. +
T Consensus 21 ~~v~I~~g~I~~vg~~~~~----~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~ 96 (403)
T 2qt3_A 21 YDIGIVGDRIIKIEAKIEG----TVKDEIDAKGNLVSPGFVDAHTHMDKSFTSTGERLPKFWSRPYTRDAAIEDGLKYYK 96 (403)
T ss_dssp EEEEEETTEEEEEESSCCS----CEEEEEECTTCBEEECEEEEEECGGGTTTTCSSSSCTTCSSCCCHHHHHHHHHHHHH
T ss_pred EEEEEECCEEEEeecCCCC----CccceEcCCCCEecccceeeeeccchhhcccccccccccCCCcccCcCHHHHHHHhh
Confidence 6899999999999986432 23579999999999999999999965432 00 0
Q ss_pred ----cchH----HHHHHHHhCCceEEEeCCCCCCCCC--CcHHHHHHHHHHHhcCCceEEEEeccc-cCCCccchHHHHH
Q 013050 59 ----EGFP----SGTKAAAAGGITTLIDMPLNSDPST--ISTETLKLKVDAAEKRIYVDVGFWGGL-VPENAYNASALEA 127 (450)
Q Consensus 59 ----~~~~----~~~~~~~~~GvT~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 127 (450)
+.+. ...++++++|||+++++. ...+.. .....+....+.........+..+... .....+..+.+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (403)
T 2qt3_A 97 NATHEEIKRHVIEHAHMQVLHGTLYTRTHV-DVDSVAKTKAVEAVLEAKEELKDLIDIQVVAFAQSGFFVDLESESLIRK 175 (403)
T ss_dssp HCCHHHHHHHHHHHHHHHHHTTEEEEEEEE-ECSTTTTTHHHHHHHHHHHHHTTTCEEEEEEECTTCTTTSTTHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHcCCcEEEEEE-cccCccccchHHHHHHHHHHhhcceeEEEEEcCCcccccCcchHHHHHH
Confidence 0111 135678899999998764 222211 112222222232222222222211110 0111223456666
Q ss_pred HHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHH
Q 013050 128 LLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSW 207 (450)
Q Consensus 128 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 207 (450)
+.+.|...++.+ .+ ......+.+.++++++.|+++|+++.+|+..... .
T Consensus 176 ~~~~g~~~~~~~-~p---~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~---------------------------~ 224 (403)
T 2qt3_A 176 SLDMGCDLVGGV-DP---ATRENNVEGSLDLCFKLAKEYDVDIDYHIHDIGT---------------------------V 224 (403)
T ss_dssp HHHTTCSEEECB-CT---TTTTSCHHHHHHHHHHHHHHTTCEEEEEECCCHH---------------------------H
T ss_pred HHhcCCCeEEEe-cC---CCCCCChHHHHHHHHHHHHHcCCCeEEEeCCccc---------------------------c
Confidence 677776444322 11 1112445689999999999999999999954321 0
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHH------HHHHHHHHhCCCcEEEecCcchhcccccccCCCCCce
Q 013050 208 EEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSS------LDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRF 281 (450)
Q Consensus 208 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~------~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~ 281 (450)
....++.+++.+.+. +. +.+..+.|+... .. .+.++.+++.|+.+.. +|..
T Consensus 225 ~~~~~~~~~~~~~~~---g~--~~~~~i~H~~~~-~~~~~~~~~~~~~~l~~~g~~v~~--~p~~--------------- 281 (403)
T 2qt3_A 225 GVYSINRLAQKTIEN---GY--KGRVTTSHAWCF-ADAPSEWLDEAIPLYKDSGMKFVT--CFSS--------------- 281 (403)
T ss_dssp HHHHHHHHHHHHHHT---TC--TTSEEEEECTHH-HHSCHHHHHHHHHHHHHHTCEEEE--ETTT---------------
T ss_pred hhHHHHHHHHHHHHc---CC--CCCeEEEehhhh-ccCChhhHHHHHHHHHHcCCEEEE--CCCC---------------
Confidence 112344445555443 11 336788998753 21 3677777777765555 4421
Q ss_pred EEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcC----CCHHH
Q 013050 282 KCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG----VTLEQ 357 (450)
Q Consensus 282 ~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g----ls~~~ 357 (450)
. .....+..+++.|+.+++|||+... + + .+.+.... +..........+ +|+++
T Consensus 282 ------~--~~~~~~~~~~~~Gv~v~lgtD~~~~-~---------~--~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~ 338 (403)
T 2qt3_A 282 ------T--PPTMPVIKLLEAGINLGCASDNIRD-F---------W--VPFGNGDM---VQGALIETQRLELKTNRDLGL 338 (403)
T ss_dssp ------C--CTTCCHHHHHHTTCEEEEECCSCSS-S---------S--CSCCCCCH---HHHHHHHHHHTTCCSHHHHHH
T ss_pred ------C--CCCCCHHHHHHcCCcEEEeCCCCCC-C---------C--CCCCCCCH---HHHHHHHHHHhCcCCccCHHH
Confidence 0 0112245677889999999997421 0 0 01111111 111111111122 68999
Q ss_pred HHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCc
Q 013050 358 LASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGN 437 (450)
Q Consensus 358 al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 437 (450)
+++++|.|||+++|+++.|+|++||.|||||+|.+++.. ......+|..||++|++||++|+
T Consensus 339 al~~~T~~~A~~lg~~~~g~i~~G~~ADlvv~d~~~~~~------------------~~~~~~~v~~v~v~G~~v~~~g~ 400 (403)
T 2qt3_A 339 IWKMITSEGARVLGIEKNYGIEVGKKADLVVLNSLSPQW------------------AIIDQAKRLCVIKNGRIIVKDEV 400 (403)
T ss_dssp HHHHTTHHHHHHHTCGGGCSSSTTSBCCEEEESSSSHHH------------------HHHHCCCEEEEEETTEEEEESSS
T ss_pred HHHHHHHHHHHhcCCCcccCCCCCCcCCEEEEcCCChHH------------------HhhcCCCccEEEECCEEEecCCc
Confidence 999999999999999445999999999999999775221 01112479999999999999999
Q ss_pred cc
Q 013050 438 HA 439 (450)
Q Consensus 438 ~~ 439 (450)
++
T Consensus 401 ~~ 402 (403)
T 2qt3_A 401 IV 402 (403)
T ss_dssp BC
T ss_pred cc
Confidence 86
No 34
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=100.00 E-value=3.7e-33 Score=276.17 Aligned_cols=366 Identities=13% Similarity=0.091 Sum_probs=200.8
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCc------c-----------------
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE------W----------------- 58 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~------~----------------- 58 (450)
.+++|+|+||||++||+..+.+. ...++||++|++|+|||||+|+|+....... .
T Consensus 50 ~~gdV~I~dgrI~aVG~~~~~~~--~~~~vIDa~G~~v~PG~ID~H~H~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~ 127 (479)
T 3hpa_A 50 RDAGLYIEDNRIVAVGPSAELPE--TADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAAQNAELFGWLTNLYKIWAHLT 127 (479)
T ss_dssp EEEEEEEETTEEEEEEEGGGSCS--CCSEEEECTTEEEEECEEECCCCGGGGGSCSCTTTTTCCHHHHHHHHHHHHTTCC
T ss_pred cCcEEEEECCEEEEEeCCccCCC--CCCeEEECCCCEEeeCceeHhhCcchhcccccccCCCcchHHHHhhhhhhhhhcC
Confidence 46899999999999998766543 4678999999999999999999984321100 0
Q ss_pred -c----chHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEecccc-CC----------Cccch
Q 013050 59 -E----GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV-PE----------NAYNA 122 (450)
Q Consensus 59 -~----~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~~ 122 (450)
+ .......+++..|+|++.++. .................................. .. .....
T Consensus 128 ~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (479)
T 3hpa_A 128 PEMIEVSTLTAMAELLQSGCTTSSDHL-YIYPNGSRLDDSIGAAQRIGMRFHASRGAMSVGQRDGGLPPDSVVEREPDIL 206 (479)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEECCB-CCCCTTCCHHHHHHHHHHHTCEEEEEEEECC----------------CHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCceeccee-eeccchhhHHHHHHHHHHhcchhhhhhheeeccccccCCCchhhhhhhhhHH
Confidence 0 012234577899999999985 3333233333333332222211111111110000 00 00111
Q ss_pred HHHHHHHH----cCCcEEE-EecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhh-hhhhhhhccCcCCcccc
Q 013050 123 SALEALLN----AGVLGLK-SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG-SERHVKLEDDTLDTRSY 196 (450)
Q Consensus 123 ~~~~~~~~----~g~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~-~~~~~~~~~~~~~~~~~ 196 (450)
+....+.. .+..... ..... ......+.+.+.+....|++.+.++..|...... +.......
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~g~~~~~h~~~~~~~~~~~~~~~--------- 274 (479)
T 3hpa_A 207 RDTQRLIETYHDEGRYAMLRVVVAP---CSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVNDIAYSREKF--------- 274 (479)
T ss_dssp HHHHHHHHHHCCCSTTCSEEEEEEE---SCTTTSCHHHHHHHHHHHHHHTCEEEEEESCSHHHHHC--------------
T ss_pred HHHHHHHHHhhhhcccccceeEecc---cccccCCHHHHHHHHHHHHhcCCeEEeecccchHHHHHHHHHc---------
Confidence 11122211 1111111 11111 1123567888999999999999999999843221 11000000
Q ss_pred ccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCC
Q 013050 197 STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD 276 (450)
Q Consensus 197 ~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~ 276 (450)
+ ...+....... ..+.+..+.|+... .. ...+..++.+.... .++.........
T Consensus 275 -----g------~~~~~~~~~~~--------~~~~~~~~~h~~~~-~~-~~~~~~~~~~~~~~--~~p~~~~~~~~~--- 328 (479)
T 3hpa_A 275 -----G------MTPAEYAEDLG--------WVGHDVWHAHCVQL-DD-AGIGLFARTGTGVA--HCPCSNMRLASG--- 328 (479)
T ss_dssp -------------CHHHHHHHTT--------CCSTTEEEEECTTC-CH-HHHHHHHHHTCEEE--ECHHHHHHTTCC---
T ss_pred -----C------CchHHHHhhhc--------cccccceeeeeEec-ch-hHHHHHHhcCCcee--eccccccccccC---
Confidence 0 00111111111 11445666776643 11 12223333333233 244322111000
Q ss_pred CCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHH--HHhcCCC
Q 013050 277 GDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY--GRKYGVT 354 (450)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~gls 354 (450)
.+ ........++.+.+++|..+.+.... ............. ....++|
T Consensus 329 -------~~---------~~~~~~~~~~~v~~gtD~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~ls 378 (479)
T 3hpa_A 329 -------IA---------PVKKMRLAGVPVGLGVDGSASNDGAQ--------------MVAEVRQALLLQRVGFGPDAMT 378 (479)
T ss_dssp -------CC---------CHHHHHHHTCCEEECCCCTTSSCCCC--------------HHHHHHHHHHHHHHHHCTTSCC
T ss_pred -------cc---------chhHHHhcCCcEEeeccccccCCCcc--------------HHHHHHHHHHHHhhhccccCCC
Confidence 00 12344567899999999765432111 1111111112221 2345799
Q ss_pred HHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceE--eeEEEEEEECCeEE
Q 013050 355 LEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRL--SGKVLATISRGNLV 432 (450)
Q Consensus 355 ~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~v~v~G~~v 432 (450)
++++++++|.|||++||++++|+|+|||+|||||||.+.+++.... ++|+.+.++ .++|.+||||||+|
T Consensus 379 ~~eal~~~T~~~A~~lgl~~~G~I~~G~~ADlvv~D~~~~~~~~~~---------~dp~~~lv~~~~~~v~~tiV~G~~V 449 (479)
T 3hpa_A 379 AREALEIATLGGAKVLNRDDIGALKPGMAADFAAFDLRQPLFAGAL---------HDPVAALVFCAPSQTAYTVVNGKVV 449 (479)
T ss_dssp HHHHHHHTTHHHHHHHTCSSSSSCSTTSBCCEEEEETTSGGGTTCT---------TSHHHHHHHSSCCCCSEEEETTEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCCccCCCCCcCCEEEEcCCCccccCCc---------cCHHHHhhccCCCCceEEEECCEEE
Confidence 9999999999999999997699999999999999998875544322 334332222 25789999999999
Q ss_pred EecCcccCCCCCccc
Q 013050 433 YKEGNHAPAACGSPI 447 (450)
Q Consensus 433 ~~~g~~~~~~~g~~~ 447 (450)
|+||++++.+.++.+
T Consensus 450 ~~dG~~~~~D~~~~~ 464 (479)
T 3hpa_A 450 VREGRLATLDLPPVI 464 (479)
T ss_dssp EETTEECSSCHHHHH
T ss_pred EECCcCCCCCHHHHH
Confidence 999999987766554
No 35
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=100.00 E-value=2.9e-32 Score=264.96 Aligned_cols=337 Identities=17% Similarity=0.136 Sum_probs=203.4
Q ss_pred cceeEEEe-CCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCC
Q 013050 2 CKRAVEIK-EGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMP 80 (450)
Q Consensus 2 ~~~~V~I~-~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~ 80 (450)
.+++|+|+ ||||++|++..+.+ .+.++||++|++|+|||||+|+|+..+....++. ..+.++++|||++++++
T Consensus 34 ~~~~v~I~~~g~I~~Ig~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~---~~~~~l~~GvTtv~d~~ 107 (417)
T 2ogj_A 34 SSTDILIGGDGKIAAVGSALQAP---ADTQRIDAKGAFISPGWVDLHVHIWHGGTDISIR---PSECGAERGVTTLVDAG 107 (417)
T ss_dssp SCEEEEECTTSBEEEEETTCCCS---SCEEECCC--CEEEECEEEEEECCCBTTBSSCCC---GGGTSGGGTEEEEEEES
T ss_pred ccceEEEecCCEEEEeccCCCCC---CCCeEEECCCCEEccCeeeccccccccccccCCC---HHHHHHhCCcCeEEeCC
Confidence 46899999 99999999754321 2457999999999999999999998765443322 23457899999999986
Q ss_pred CCCCCCCCcHHHHHHHHHHHhc-CCceEEEEec---cccC-----CC----ccchHHHHHHHHc---CCcEEEEecccCC
Q 013050 81 LNSDPSTISTETLKLKVDAAEK-RIYVDVGFWG---GLVP-----EN----AYNASALEALLNA---GVLGLKSFMCPSG 144 (450)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~-----~~----~~~~~~~~~~~~~---g~~~~~~~~~~~~ 144 (450)
+..+ .....+... ..+. ...+...... +... .. ....+.+.++.+. ++.+++.++....
T Consensus 108 -~~~~--~~~~~~~~~--~~~~~~~~i~~~~~~~~~G~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~~~ 182 (417)
T 2ogj_A 108 -SAGE--ANFHGFREY--IIEPSRERIKAFLNLGSIGLVACNRVPELRDIKDIDLDRILECYAENSEHIVGLKVRASHVI 182 (417)
T ss_dssp -SCCS--TTHHHHHHH--TTTTCSSEEEEEEESSTTTTTTTTTSCSCSSGGGCCHHHHHHHHHTCTTTEEEEEEEESHHH
T ss_pred -cCCC--cCHHHHHHH--HhhccccCeEEEeccccCcCCCCCCcccccchhhcCHHHHHHHHHhCCCceEEEEEEecCCc
Confidence 3322 233222221 1111 1111111110 1111 01 0123456666653 4456777654211
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhcc
Q 013050 145 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRT 224 (450)
Q Consensus 145 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~ 224 (450)
....+.+.+.++++.|++.|+++.+|+..... .++.+......
T Consensus 183 ---~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~-------------------------------~~~~~~~~l~~--- 225 (417)
T 2ogj_A 183 ---TGSWGVTPVKLGKKIAKILKVPMMVHVGEPPA-------------------------------LYDEVLEILGP--- 225 (417)
T ss_dssp ---HTTCTTHHHHHHHHHHHHHTCCEEEEECSSSS-------------------------------CHHHHHHHCCT---
T ss_pred ---cccccHHHHHHHHHHHHHcCCcEEEEcCCCcc-------------------------------cHHHHHHHhcC---
Confidence 12356788889999999999999999954211 01222222221
Q ss_pred CCCCCCceEEEEecCCh---------hHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHH
Q 013050 225 DGPAEGAHLHIVHLSDA---------SSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEK 295 (450)
Q Consensus 225 ~~~~~~~~~~~~h~~~~---------~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (450)
+ ..+.|+... ....+.++++++.|+.+ .+++... ......
T Consensus 226 -----g--~~~~H~~~~~~~~~~~~~~~~~~~i~~~~~~g~~v--~~~~~~~----------------------~~~~~~ 274 (417)
T 2ogj_A 226 -----G--DVVTHCFNGKSGSSIMEDEDLFNLAERCAGEGIRL--DIGHGGA----------------------SFSFKV 274 (417)
T ss_dssp -----T--CEEETTTCCCTTTCTTSCHHHHHHHHHC--CCCEE--ECCBCSS----------------------SCCHHH
T ss_pred -----C--CEEEeccCCCccchhccCHHHHHHHHHHHhcCcEE--EecCCCc----------------------cccchH
Confidence 2 344565431 13446666666666433 2233210 012456
Q ss_pred HHHHHhcC-CeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCC
Q 013050 296 LWEALMDG-HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVS 374 (450)
Q Consensus 296 l~~~~~~g-~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg~~~ 374 (450)
++.+++.| +.++++||+. .+.. .++ ...+...+..+.+.++|++++++++|.|||++||+++
T Consensus 275 ~~~~~~~G~~~~~lgtD~~-~~~~-----~g~-----------~~~l~~~~~~~~~~~l~~~~al~~~T~n~A~~lgl~~ 337 (417)
T 2ogj_A 275 AEAAIARGLLPFSISTDLH-GHSM-----NFP-----------VWDLATTMSKLLSVDMPFENVVEAVTRNPASVIRLDM 337 (417)
T ss_dssp HHHHHHTTCCCSBCCBCBS-TTTT-----TTT-----------CCCHHHHHHHHHHTTCCHHHHHHTTTHHHHHHTTCCC
T ss_pred HHHHHHcCCCceEEEcCCC-CCcc-----CCC-----------hhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 78888999 9999999975 4210 011 0124444444555789999999999999999999944
Q ss_pred CCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEee----EEEEEEECCeEEEecCcccCCCCCcccc
Q 013050 375 KGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSG----KVLATISRGNLVYKEGNHAPAACGSPIL 448 (450)
Q Consensus 375 ~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~v~v~G~~v~~~g~~~~~~~g~~~~ 448 (450)
+|+|+|||.|||||+|.+.++.. ..++.+....+ +|..||++|++||++|+++... ++++
T Consensus 338 ~G~l~~G~~ADlvv~d~~~~~~~------------~~~~~g~~~~~~~~~~v~~t~v~G~~v~~~~~~~~~~--~~~~ 401 (417)
T 2ogj_A 338 ENRLDVGQRADFTVFDLVDADLE------------ATDSNGDVSRLKRLFEPRYAVIGAEAIAASRYIPRAR--KLVR 401 (417)
T ss_dssp SSTTSTTSBCEEEEEEEEEEEEE------------EECTTSCEEEEEEEEEEEEEEETTEEEECCCCCCCC-------
T ss_pred CCccCCCCcccEEEEecccCCce------------ecCCCCceEecccccceEEEEECCEEEEeCCccchHH--HHHH
Confidence 99999999999999997653321 23344444444 8999999999999999988654 5544
No 36
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=100.00 E-value=9.5e-33 Score=271.72 Aligned_cols=343 Identities=17% Similarity=0.140 Sum_probs=200.9
Q ss_pred ceeEEE-eCCEEEEecc--CCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCC-c---------------cc----
Q 013050 3 KRAVEI-KEGNIISIVS--EEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-E---------------WE---- 59 (450)
Q Consensus 3 ~~~V~I-~~g~I~~Ig~--~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~-~---------------~~---- 59 (450)
+++|+| +||||++|++ ....+ .+.++||++|++|+|||||+|+|+..+... . +.
T Consensus 33 ~~~v~I~~~g~I~~Vg~~~~~~~~---~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (458)
T 2p9b_A 33 NMTIVVGADGRIEQVAPSIETSIP---AEYHYLDGTGKIVMPGLINAHTHLFSQGKPLNPKLATPKGQRMVATFAHSPLG 109 (458)
T ss_dssp EEEEEECTTSBEEEEEEGGGCCCC---TTCEEEECTTCEEEECEEEEEECSCC---------------------------
T ss_pred CcEEEEecCCEEEEEeccccCCCC---CCCeEEECCCCEEccceeeeeeccccccccccccccchhhhhhhhhhhhhccc
Confidence 478999 9999999997 32221 356899999999999999999999765422 0 11
Q ss_pred ------chHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEecc-------ccC-------CCc
Q 013050 60 ------GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG-------LVP-------ENA 119 (450)
Q Consensus 60 ------~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-------~~~ 119 (450)
.+....+.++++|||++++++ +..+ ....+....+.. .....++...+. ... .+.
T Consensus 110 ~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~---~~~~~~~~~~~g-~~~g~r~~~~g~~~~~~g~~~~~~~~~~~~~~ 184 (458)
T 2p9b_A 110 KPYMAATVKHNATTLLESGVTTIRTLG-DVGY---EVVTLRDQIDAG-QILGPRILASGPLMAIPEGHGAPLIALTSGTP 184 (458)
T ss_dssp --CHHHHHHHHHHHHHHTTEEEEEESC-CSSS---HHHHHHHHHHTT-SSCCCEEECCCSCEECCCSSCCCCEECCSCCH
T ss_pred ccHHHHHHHHHHHHHHHcCCcEEEeCC-CCcc---ccHHHHHHHHcC-CCCCCeEEecccccccCCCCCccccCccCCCH
Confidence 233467889999999999986 3221 111222221111 110123322111 100 111
Q ss_pred -cchHHHHHHHHcCCcEEEEecccCC-------CCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcC
Q 013050 120 -YNASALEALLNAGVLGLKSFMCPSG-------INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTL 191 (450)
Q Consensus 120 -~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~ 191 (450)
+..+.++++.+.|...+|.+....- ..+.+..+.+.+.++++.|+++|++|.+|+.+...
T Consensus 185 ~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~------------ 252 (458)
T 2p9b_A 185 EEARTAVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVIVGAHAQSPEG------------ 252 (458)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECSCCTTSCCCC------CCCHHHHHHHHHHHHHTTCCEEEEECSHHH------------
T ss_pred HHHHHHHHHHHHcCCCEEEEEecCCcCCCCccCCCCCCcCCHHHHHHHHHHHHHCCCeEEEEeCCHHH------------
Confidence 1123455566678888888764210 11234678899999999999999999999964321
Q ss_pred CccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHH------hCCCcEEEecCcc
Q 013050 192 DTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAK------TNGDSITVETCPH 265 (450)
Q Consensus 192 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~------~~g~~v~~~~~~~ 265 (450)
+..+++. +.. .+.|+... ..+.++.++ +.|+.+....++.
T Consensus 253 --------------------i~~~~~~-----------G~~-~i~H~~~~--~~~~~~~~~~~~~~~~~g~~v~p~~~~~ 298 (458)
T 2p9b_A 253 --------------------VRRSLLA-----------GVD-TIEHGSVL--DDELIGMFRHNPNALRGYSALIPTLSAG 298 (458)
T ss_dssp --------------------HHHHHHH-----------TCS-EEEECCCC--CHHHHHHHHCCTTSTTSCCEEECCHHHH
T ss_pred --------------------HHHHHHc-----------CCC-EEEECCCC--CHHHHHHHhcccccccCCeEEEeecchh
Confidence 2333221 322 34666542 234667777 7776443222111
Q ss_pred h--hcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCC-CChhhhcccCCCccccCCCCcchhhHHH
Q 013050 266 Y--LAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLP 342 (450)
Q Consensus 266 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 342 (450)
. ........ .........++.+.......++.+++.|+.+++|||+.+ .+ +.+. +.
T Consensus 299 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gtD~~~~~~--------------~~~~------~~ 357 (458)
T 2p9b_A 299 LPLTLLGQDVT-GITDIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTGMTFV--------------PQYA------TW 357 (458)
T ss_dssp HHHHHSCHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCCCTTSTTS--------------CTTC------HH
T ss_pred hHHHhhhcccc-cCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCCCCC--------------cccc------HH
Confidence 1 10110000 000000000000111234566788899999999999632 11 0111 11
Q ss_pred HHHHHHHh-cCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEee
Q 013050 343 VTWSYGRK-YGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSG 420 (450)
Q Consensus 343 ~~~~~~~~-~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (450)
..+..+.+ .++|++++++++|.|||+++|+ +++|+|++||.|||||+|.++..++ . . ..
T Consensus 358 ~e~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~Gsi~~Gk~ADlvvld~~p~~~~--~---------~--------~~ 418 (458)
T 2p9b_A 358 RELELLVAYAGFSPAEALHAATAVNASILGVDAETGSLEVGKSADLLVLNANPLDDL--R---------A--------LE 418 (458)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCG--G---------G--------GT
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCcCCCCccCCCCcCCEEEECCCchhCH--H---------H--------hc
Confidence 12223334 5899999999999999999999 6689999999999999998752111 0 0 02
Q ss_pred EEEEEEECCeEEEec--Cccc
Q 013050 421 KVLATISRGNLVYKE--GNHA 439 (450)
Q Consensus 421 ~v~~v~v~G~~v~~~--g~~~ 439 (450)
+|..||++|++||++ +++.
T Consensus 419 ~v~~v~v~G~~v~~~~~~~~~ 439 (458)
T 2p9b_A 419 HPALVIAAGHPVWRPGPKRFA 439 (458)
T ss_dssp SCSEEEETTEECCSCCCCCCH
T ss_pred cceEEEECCEEEecCchhhhh
Confidence 678999999999988 7665
No 37
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=100.00 E-value=3.8e-32 Score=263.59 Aligned_cols=332 Identities=15% Similarity=0.138 Sum_probs=200.6
Q ss_pred eeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcccch-----------HHHHHHHHhCC
Q 013050 4 RAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGF-----------PSGTKAAAAGG 72 (450)
Q Consensus 4 ~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~-----------~~~~~~~~~~G 72 (450)
++|+|+||||++|++. . + .+.++||++|++|+|||||+|+|+.......|+.+ ....+.++++|
T Consensus 26 ~~v~I~~g~I~~ig~~-~-~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G 100 (408)
T 3be7_A 26 ADLLIRNGKIAEIGKI-N-T---KDATVISIPDLILIPGLMDSHVHIVGNDSKGEESIADSSHMGTVWGVVNAEKTLMAG 100 (408)
T ss_dssp CEEEEETTEEEEEECC-C-C---SSSEEEEEEEEEEEECEEEEEECCSSCCCCSGGGTTCCTHHHHHHHHHHHHHHHTTT
T ss_pred eEEEEECCEEEEEeCC-C-C---CCCeEEECCCCEECcCceeeeEcccCCCCcchhhhcCCHHHHHHHHHHHHHHHHHcC
Confidence 7899999999999976 2 1 35689999999999999999999972221222211 11567889999
Q ss_pred ceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEecc-------ccCC-------------CccchHH----HHHH
Q 013050 73 ITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG-------LVPE-------------NAYNASA----LEAL 128 (450)
Q Consensus 73 vT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-------------~~~~~~~----~~~~ 128 (450)
|||+++++ +..+ ....+....+... ....++...+. .... .....+. +++.
T Consensus 101 vTtv~d~~-~~~~---~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (408)
T 3be7_A 101 FTTVRNVG-AANY---ADVSVRDAIERGV-INGPTMLVSGPALGITGGHCDHNLLPPEFNYSSEGVVDSPWEARKMVRKN 175 (408)
T ss_dssp EEEEEECC-CSTT---HHHHHHHHHHTTS-SCCCEEEECCSCBBCTTSTTSCCCSCTTTCCCCTTBCCSHHHHHHHHHHH
T ss_pred CCEEEeCC-Cccc---cCHHHHHHHHCCC-CCCCEEEEccceeeccCCCCccccccccccccCCcccCCHHHHHHHHHHH
Confidence 99999996 3322 1112222211111 00112222110 0000 0112233 3444
Q ss_pred HHcCCcEEEEecccC-----CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCC
Q 013050 129 LNAGVLGLKSFMCPS-----GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTR 203 (450)
Q Consensus 129 ~~~g~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (450)
.+.|+..++.+.... ...+.+..+.+.+.++++.|+++|+++.+|+.+..
T Consensus 176 ~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~------------------------- 230 (408)
T 3be7_A 176 RKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLI------------------------- 230 (408)
T ss_dssp HHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCEEEEEECSHH-------------------------
T ss_pred HhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHH-------------------------
Confidence 557888888875321 11123567889999999999999999999995432
Q ss_pred ChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEE
Q 013050 204 PPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKC 283 (450)
Q Consensus 204 p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (450)
.+..+++ . +.. .+.|+.. ...+.++.+++.|+.+............ .+.....
T Consensus 231 -------~i~~~~~----~-------g~~-~i~H~~~--~~~~~i~~~~~~g~~v~~~~~~~~~~~~------~~~~~~~ 283 (408)
T 3be7_A 231 -------GIKAAIK----A-------GVD-SVEHASF--IDDETIDMAIKNNTVLSMDIFVSDYILG------EGAKAGI 283 (408)
T ss_dssp -------HHHHHHH----H-------TCS-EEEECTT--CCHHHHHHHHHTTCEEECCCSTHHHHHT------TTTTTTC
T ss_pred -------HHHHHHH----c-------CCC-EEEECCC--CCHHHHHHHHHCCCEEeeeecHHHHhhh------hccccCC
Confidence 1233332 2 332 4677775 3456777777788655432111100000 0000001
Q ss_pred cCCCCCh------hhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHH
Q 013050 284 APPIRDA------ANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQ 357 (450)
Q Consensus 284 ~~~~~~~------~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~ 357 (450)
.|+.+.. .....++.+++.|+.+++|||+.+ .+. +... ..+..+.+.++|+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gTD~~~-~p~--------------~~~~------~~~~~~~~~gls~~~ 342 (408)
T 3be7_A 284 REESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGI-FDH--------------GDNA------KQFAYMVEWGMTPLE 342 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTCCEECCCCBTT-BCT--------------TCGG------GHHHHHHHTTCCHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC-CCC--------------chHH------HHHHHHHHcCCCHHH
Confidence 1111000 113556778889999999999742 110 1111 111223445999999
Q ss_pred HHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCc
Q 013050 358 LASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGN 437 (450)
Q Consensus 358 al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 437 (450)
+++++|.|||+++|++++|+|++||.|||||+|.++..++. . ..+|..||++|++|+++.-
T Consensus 343 al~~~T~n~A~~lgl~~~G~i~~G~~ADlvvld~~p~~~~~-----------~--------~~~v~~v~~~G~~v~~~~~ 403 (408)
T 3be7_A 343 AIQASTIKTATLFGIENIGQIKEGFDADIVGVIENPLANIR-----------T--------LEEVAFVMKEGKVYKREGH 403 (408)
T ss_dssp HHHTTTHHHHHHHTCSSCSSCCTTSBCCEEEESSCTTTCGG-----------G--------TTSCCEEEETTEEEEECCC
T ss_pred HHHHHHHHHHHHhCCCcccccCCCCccCEEEECCCchhhHH-----------H--------hhceeEEEECCEEEecccc
Confidence 99999999999999976899999999999999987522110 0 0267899999999998754
No 38
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=3.6e-33 Score=275.47 Aligned_cols=359 Identities=15% Similarity=0.049 Sum_probs=204.5
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCC------CCC--c---------------c
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP------GRT--E---------------W 58 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~------~~~--~---------------~ 58 (450)
.+++|+|+||||++|++..+.+...++.++||++|++|+|||||+|+|+... +.. . .
T Consensus 34 ~~~~V~I~~G~I~~Vg~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~Hl~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~ 113 (475)
T 2ood_A 34 QDGLMVVTDGVIKAFGPYEKIAAAHPGVEITHIKDRIIVPGFIDGHIHLPQTRVLGAYGEQLLPWLQKSIYPEEIKYKDR 113 (475)
T ss_dssp EEEEEEEESSBEEEEEEHHHHHHHSTTCEEEEEEEEEEEECEEEEEEEGGGTTCTTCCSCCHHHHHHHHTHHHHGGGGSH
T ss_pred ECCEEEEECCEEEEEeChhhhccccCCCeEEeCCCcEEecceecCcccHHhHhhcCCCCCCHHHHHHHhccchhhccCCH
Confidence 4689999999999999753221001356899999999999999999998532 110 0 1
Q ss_pred cch----HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcC-CceEEE--Eecc-cc----CCCccchHHHH
Q 013050 59 EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR-IYVDVG--FWGG-LV----PENAYNASALE 126 (450)
Q Consensus 59 ~~~----~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~-~~----~~~~~~~~~~~ 126 (450)
+.+ ....+.++++|||++++++ .. ....+....+..... ..+.++ .... .. ....+..+...
T Consensus 114 e~~~~~~~~~~~~~l~~GvTtv~~~~-~~-----~~~~~~~~~~~~~~~g~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 187 (475)
T 2ood_A 114 NYAREGVKRFLDALLAAGTTTCQAFT-SS-----SPVATEELFEEASRRNMRVIAGLTGIDRNAPAEFIDTPENFYRDSK 187 (475)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEEEEC-CS-----SHHHHHHHHHHHHHHTCCEEECCEECCSSSCTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCceEEEEec-cc-----CchhHHHHHHHHHHcCCeEEEEeeecccCCCcccccCHHHHHHHHH
Confidence 112 2236688999999999975 22 222233333322221 111111 1110 00 00011223344
Q ss_pred HHHHc--CCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEecCCh-hhhhhhhhhccCcCCccccccccCC
Q 013050 127 ALLNA--GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRPLLVHAEME-KGSERHVKLEDDTLDTRSYSTYLKT 202 (450)
Q Consensus 127 ~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (450)
++.+. +...++..+.+ ...+.++++.+.++++.|+++ |+++.+|+.+. ..+.......+ .
T Consensus 188 ~~~~~~~~~~~~~~~~~~---~~~~~~~~e~l~~~~~~a~~~~g~~v~~H~~e~~~~~~~~~~~~g-------------~ 251 (475)
T 2ood_A 188 RLIAQYHDKGRNLYAITP---RFAFGASPELLKACQRLKHEHPDCWVNTHISENPAECSGVLVEHP-------------D 251 (475)
T ss_dssp HHHHHHTTBTTEEEEEEE---CBGGGCCHHHHHHHHHHHHHCTTSEEEEECSCCHHHHHHHHHHCT-------------T
T ss_pred HHHHHhccCCceEEEEec---cccCcCCHHHHHHHHHHHHhCCCCcEEEeeCCChHHHHHHHHHcC-------------C
Confidence 44431 22223332222 122457889999999999999 99999999532 22221111100 0
Q ss_pred CChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceE
Q 013050 203 RPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFK 282 (450)
Q Consensus 203 ~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 282 (450)
....+++.++. + ..+.+..+.|+... +.+.++.+++.|+. +.+||...... + .
T Consensus 252 ---------~~~~~~~~~~~---g-~~~~~~~i~H~~~~--~~~~i~~~~~~g~~--~~~~P~~~~~l-------~---~ 304 (475)
T 2ood_A 252 ---------CQDYLGVYEKF---D-LVGPKFSGGHGVYL--SNNEFRRMSKKGAA--VVFCPCSNLFL-------G---S 304 (475)
T ss_dssp ---------CSSHHHHHHTT---T-CCSTTEEEECCTTC--CHHHHHHHHHHTCE--EEECHHHHHHT-------T---C
T ss_pred ---------CccHHHHHHHc---C-CCCCCcEEEEeecC--CHHHHHHHHHcCCE--EEEChhhhhhc-------c---c
Confidence 00122333322 0 11445667777653 22456666666754 44477543210 0 0
Q ss_pred EcCCCCChhhHHHHHHHHhcCCe--eEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHH-------------
Q 013050 283 CAPPIRDAANKEKLWEALMDGHI--DMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY------------- 347 (450)
Q Consensus 283 ~~~~~~~~~~~~~l~~~~~~g~~--~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------------- 347 (450)
.. ..++++++.|+. +++|||+.+...... ... +......
T Consensus 305 ~~---------~~~~~~~~~Gv~~~~~lgTD~~~~~~~~~----------------~~~-~~~~~~~~~~~~~~~~~~~~ 358 (475)
T 2ood_A 305 GL---------FRLGRATDPEHRVKMSFGTDVGGGNRFSM----------------ISV-LDDAYKVGMCNNTLLDGSID 358 (475)
T ss_dssp CC---------CCHHHHTCTTSCCEEEECCCBTTBSCCCH----------------HHH-HHHHHHHHHHHHHHSSSSSC
T ss_pred Cc---------CCHHHHHhCCCCCcEEEEccCCCCCCcCH----------------HHH-HHHHHHHhcccchhccCCcc
Confidence 11 124577889999 999999765221100 000 0000000
Q ss_pred --------HHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcc------c----CCC
Q 013050 348 --------GRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVH------M----KHP 408 (450)
Q Consensus 348 --------~~~~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~------~----~~~ 408 (450)
..+.++|++++++++|.|||+++|+ +++|+|++||.|||||+|.++.+..... ... + ...
T Consensus 359 p~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~GsL~~Gk~ADlvvld~~~~~~~~~~-~~~~~~~~~s~~~~~~~ 437 (475)
T 2ood_A 359 PSRKDLAEAERNKLSPYRGFWSVTLGGAEGLYIDDKLGNFEPGKEADFVALDPNGGQLAQPW-HQSLIADGAGPRTVDEA 437 (475)
T ss_dssp GGGCCHHHHHHTCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTCSSTTHHH-HHTTC--CCSCCSHHHH
T ss_pred cccccccccccCCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCccCEEEEeCCCccccccc-cccccccccccccccch
Confidence 1236899999999999999999999 6689999999999999998864432110 000 0 001
Q ss_pred CccccCCceE---eeEEEEEEECCeEEEecCc
Q 013050 409 SISAYLGRRL---SGKVLATISRGNLVYKEGN 437 (450)
Q Consensus 409 ~~~~~~~~~~---~~~v~~v~v~G~~v~~~g~ 437 (450)
++||.+.++ .++|..|||+|++||++.+
T Consensus 438 -~~p~~~~~~~~~~~~V~~t~v~G~~v~~~~~ 468 (475)
T 2ood_A 438 -ASMLFAVMMVGDDRCVDETWVMGKRLYKKSE 468 (475)
T ss_dssp -HHHHHHHHHHCCGGGEEEEEETTEEEEECC-
T ss_pred -hhHHHHHHhhCCCCCeeEEEECCEEEEECCC
Confidence 446665554 3689999999999999876
No 39
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=100.00 E-value=3.8e-32 Score=270.20 Aligned_cols=336 Identities=22% Similarity=0.257 Sum_probs=214.5
Q ss_pred cceeEEEeCCEEEEeccCCCCC---------CCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCC
Q 013050 2 CKRAVEIKEGNIISIVSEEDWP---------RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGG 72 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~---------~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~G 72 (450)
.+++|+|+||||++|++..++. ...++.++||++|++|+|||||+|+|+..+. ..+.++++|
T Consensus 82 ~~~dI~I~dGrI~~IG~~~~~~~~~~~~~~~~~~~~~evIDa~G~iV~PGlID~HvHl~~p~---------~~~~al~~G 152 (569)
T 1e9y_B 82 YKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISPQ---------QIPTAFASG 152 (569)
T ss_dssp EEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEEECEEEEEEETTCTT---------HHHHHHHTT
T ss_pred EeeeEEEECCEEEEeecCCCccccccccccccCCCCCeEEECCCCEEecCEEEEeecCCCcH---------HHHHHHhCC
Confidence 4689999999999999764311 0023568999999999999999999997653 257889999
Q ss_pred ceEEEeCCCCCC----C--CCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCcEEEEecccCCCC
Q 013050 73 ITTLIDMPLNSD----P--STISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIN 146 (450)
Q Consensus 73 vT~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 146 (450)
|||+++++.+.. + .......+....+... ...+++.+++... ....+.+.++++.|+.+++.+..+
T Consensus 153 vTTv~d~g~~p~~~t~~~~~~~g~~~l~~~~~a~~-~~~~~~~~~g~g~---~~~~~~l~e~~~~Ga~gik~~~~~---- 224 (569)
T 1e9y_B 153 VTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAE-EYSMNLGFLAKGN---ASNDASLADQIEAGAIGFKIHEDW---- 224 (569)
T ss_dssp EEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHT-TSSSEEEEEEECC---CSCHHHHHHHHHTTCSEEEECGGG----
T ss_pred eeEEEcCCcCCCCCCcCcccCCcHHHHHHHHHHhc-ccCceEEEECCCC---cCCHHHHHHHHHcCCCEEEecCCC----
Confidence 999999852110 0 1111344444444443 3456776654321 234567888888999999986533
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCC
Q 013050 147 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG 226 (450)
Q Consensus 147 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~ 226 (450)
..+.+.+.++++.|+++|+++.+|+++... .+ .+...+ +...
T Consensus 225 ---~~t~e~l~~~l~~A~~~g~~V~iHa~~~~e-----------~g------------------~~~~~l--a~~~---- 266 (569)
T 1e9y_B 225 ---GTTPSAINHALDVADKYDVQVAIHTDTLNE-----------AG------------------CVEDTM--AAIA---- 266 (569)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCEEEECCCTTCS-----------SC------------------CHHHHH--HHHT----
T ss_pred ---CCCHHHHHHHHHHHHHhCCEEEEEcCCccc-----------ch------------------HHHHHH--HHHc----
Confidence 468899999999999999999999964211 00 011112 1222
Q ss_pred CCCCceEEEEecCChhHH---HHHHHHHHhCCCcEEEecCcchhcccccccCC-CCC---ceEEcCCC---------CCh
Q 013050 227 PAEGAHLHIVHLSDASSS---LDLLMEAKTNGDSITVETCPHYLAFSAEEIPD-GDT---RFKCAPPI---------RDA 290 (450)
Q Consensus 227 ~~~~~~~~~~h~~~~~~~---~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~---------~~~ 290 (450)
+.++|+.|++.. .. .+.++.+++.|+ ....++.++.++.+.... .+. .....+++ +..
T Consensus 267 ---g~~~hi~H~~~~-~~~~~~d~I~~~~~~gv--~~~~~~ptl~~t~~~~~~~~d~~~v~h~l~~~~~ed~~~~~~rlr 340 (569)
T 1e9y_B 267 ---GRTMHTFHTEGA-GGGHAPDIIKVAGEHNI--LPASTNPTIPFTVNTEAEHMDMLMVCHHKDKSIKEDVQFADSRIR 340 (569)
T ss_dssp ---TCCEEETTTTST-TSCSTTTGGGGGGSTTE--EEEECGGGCSCBTTHHHHHHHHHHHTTTCCSSCHHHHHHHHHHCC
T ss_pred ---CCCEEEEEcccC-cccccHHHHHHHHHcCC--eeEeeCCccccccchhhhhhchhhhhhhcCcccHHHHHHhhcchh
Confidence 778999999874 33 677788777764 222233233222111000 000 01111221 011
Q ss_pred hhHHHHHHHHh-cCCeeEEcCCCCCCChh-------h----hcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHHH
Q 013050 291 ANKEKLWEALM-DGHIDMLSSDHSPTVPE-------L----KLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQL 358 (450)
Q Consensus 291 ~~~~~l~~~~~-~g~~~~~gtD~~~~~~~-------~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~a 358 (450)
.....+++.+. .|+.+++|||+.+.... + ++.. ..|....+ ...+.+++++++
T Consensus 341 ~~~~a~~~~L~d~Gv~v~iGSD~~~~~~~g~~~~~~~~~~~~~~~-------~~G~l~~~--------~~~~~~ls~~~a 405 (569)
T 1e9y_B 341 PQTIAAEDTLHDMGAFSITSSDSQAMGRVGEVITRTWQTADKNKK-------EFGRLKEE--------KGDNDNFRIKRY 405 (569)
T ss_dssp HHHHHHHHHHHHTTSCCEECCCTTSSCCTTSHHHHHHHHHHHHHH-------HHCSCSSC--------CSSSCHHHHHHH
T ss_pred hhHHHHHHHHHhCCCEEEEeCCCCccCcccccccchhhHHHHhHh-------hccCcchh--------hccccCCCHHHH
Confidence 23455666666 69999999998765421 0 0000 00000000 002345889999
Q ss_pred HHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEec-C
Q 013050 359 ASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKE-G 436 (450)
Q Consensus 359 l~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~-g 436 (450)
++++|.|||+++|+ +++|+|++||.|||||||.++. . .++..||++|++||.+ |
T Consensus 406 l~~~T~npA~~lGl~~~~GsIe~Gk~ADlvv~d~~~~------------~------------~~v~~v~~~G~iv~~~~g 461 (569)
T 1e9y_B 406 LSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFF------------G------------VKPNMIIKGGFIALSQMG 461 (569)
T ss_dssp HGGGTHHHHHHTTCTTTSSSSCTTSBCCEEEECTTTT------------T------------TCCSEEEETTEEEEEEEC
T ss_pred HHHHhHHHHHHcCCCCCccCcCCCCCCCEEEECchhc------------C------------CCccEEEECCEEEEcCCC
Confidence 99999999999999 6699999999999999997641 0 2677999999999986 5
Q ss_pred c
Q 013050 437 N 437 (450)
Q Consensus 437 ~ 437 (450)
.
T Consensus 462 ~ 462 (569)
T 1e9y_B 462 D 462 (569)
T ss_dssp C
T ss_pred C
Confidence 4
No 40
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=100.00 E-value=6.2e-32 Score=266.16 Aligned_cols=359 Identities=16% Similarity=0.121 Sum_probs=198.9
Q ss_pred cceeEEEeC-CEEEEeccCCCCC-----CCCCCCcEEec-CCCEEeccceeeccccCCCCCC---------cc-------
Q 013050 2 CKRAVEIKE-GNIISIVSEEDWP-----RNSKTGQVVDY-GEAVIMPGLIDVHAHLDDPGRT---------EW------- 58 (450)
Q Consensus 2 ~~~~V~I~~-g~I~~Ig~~~~~~-----~~~~~~~viD~-~g~~v~PG~iD~H~H~~~~~~~---------~~------- 58 (450)
.+++|+|++ |||++|++..+.+ ...++.+++|+ +|++|||||||+|+|+....+. .|
T Consensus 52 ~~~~v~I~~~g~I~~vg~~~~~~~~~~~~~~~~~~viD~~~g~~v~PG~ID~H~H~~~~~~rg~~~d~~l~~wL~~~~~p 131 (476)
T 4aql_A 52 RDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHASQYSFAGSSIDLPLLEWLTKYTFP 131 (476)
T ss_dssp EEEEEEECTTSBEEEEEEGGGHHHHHHHTTCCGGGCEECCTTCEEEECEEEEEEEGGGGGGTTSCCCSCHHHHHHHTHHH
T ss_pred cCcEEEEecCCeEEEecCcchhhhhhhhccCCCceEEEcCCCCEEeCCeeccccchHHHHHHHHhcCCCHHHHHHHhhhh
Confidence 568999998 9999999864321 11245689995 5899999999999998432111 11
Q ss_pred -------c-----chHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhc---CCceEEEEecccc------CC
Q 013050 59 -------E-----GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK---RIYVDVGFWGGLV------PE 117 (450)
Q Consensus 59 -------~-----~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------~~ 117 (450)
+ .......+++++|||++.+++ . ...+......+.... +..+......... ..
T Consensus 132 ~e~~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~~~-~-----~~~~~~~~~~~a~~~~G~r~~~~~~~~d~~~~~p~~~~~ 205 (476)
T 4aql_A 132 AEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFA-T-----IHTDSSLLLADITDKFGQRAFVGKVCMDLNDTFPEYKET 205 (476)
T ss_dssp HHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEEC-C-----SCHHHHHHHHHHHHHHTCEEEEECEECSCCSSCTTSCCC
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHCCeeEEEEec-c-----cCchHHHHHHHHHHHhCCEEEEeeccccCCCCCcccccC
Confidence 0 011223578999999999875 1 122322222222221 1111111111000 00
Q ss_pred CccchHHHHHH----HHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChh-hhhhhhhhccCcCC
Q 013050 118 NAYNASALEAL----LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK-GSERHVKLEDDTLD 192 (450)
Q Consensus 118 ~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~-~~~~~~~~~~~~~~ 192 (450)
.....+...++ ...+...++..+.+. ..+.++.+.++++++.|+++|+++.+|+.+.. .+.......+..
T Consensus 206 ~~~~l~~~~~~i~~~~~~~~~~v~~~l~p~---~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~~~~~-- 280 (476)
T 4aql_A 206 TEESIKETERFVSEMLQKNYSRVKPIVTPR---FSLSCSETLMGELGNIAKTRDLHIQSHISENRDEVEAVKNLYPSY-- 280 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSEEECBEEC---CTTTSCHHHHHHHHHHHHHTTCCEEEEESCSHHHHHHHHHHCTTS--
T ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEeCC---cCCcCCHHHHHHHHHHHHHcCCceEEEecCCHHHHHHHHHHhCCC--
Confidence 01122223333 222333344444332 22467899999999999999999999995432 222221111100
Q ss_pred ccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhccccc
Q 013050 193 TRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAE 272 (450)
Q Consensus 193 ~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 272 (450)
....+...+. + ..+.+..+.|+... +.+.++.+++.++.+.. ||........
T Consensus 281 --------------------~~~~~~~~~~--g--~l~~~~~~~H~~~l--~~~~~~~l~~~g~~v~~--~P~sn~~l~~ 332 (476)
T 4aql_A 281 --------------------KNYTSVYDKN--N--LLTNKTVMAHGCYL--SAEELNVFHERGASIAH--CPNSNLSLSS 332 (476)
T ss_dssp --------------------SSHHHHHHTT--T--CCSTTEEEEECTTC--CHHHHHHHHHHTCEEEE--CHHHHHHTTC
T ss_pred --------------------CCHHHHHHHc--C--CCCCCEEEEeCCCC--CHHHHHHHHHcCCEEEE--CchhhhhhCc
Confidence 0111222221 0 11445667777652 22345555666655444 7754322110
Q ss_pred ccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhH-HHHHHHHH---
Q 013050 273 EIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFV-LPVTWSYG--- 348 (450)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~--- 348 (450)
. ...+.++++.|+.+++|||..+... . ...... ....+...
T Consensus 333 ----------g---------~~p~~~~~~~Gv~v~lGtD~~~~~~-~---------------~~~~~~~~a~~~~~~~~~ 377 (476)
T 4aql_A 333 ----------G---------FLNVLEVLKHEVKIGLGTDVAGGYS-Y---------------SMLDAIRRAVMVSNILLI 377 (476)
T ss_dssp ----------C---------CCCHHHHHHTTCEEEECCCTTTSSC-C---------------CHHHHHHHHHHHHHHHHH
T ss_pred ----------c---------hHHHHHHHHCCCcEEEeCCCCCCCC-C---------------CHHHHHHHHHHHHhhhhc
Confidence 0 0124566789999999999753211 1 111111 11111111
Q ss_pred ---HhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCC----cccCCCCccccCCceEe-
Q 013050 349 ---RKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHP----VHMKHPSISAYLGRRLS- 419 (450)
Q Consensus 349 ---~~~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~- 419 (450)
...++|++++++++|.|||+++|+ +++|+|++||.|||||+|.+.+.+ +.. . +..... ++|+...++.
T Consensus 378 ~~~~~~~l~~~~al~~aT~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~-p~~-~~~~~~~~~~~-~~~~~~~v~~~ 454 (476)
T 4aql_A 378 NKVNEKSLTLKEVFRLATLGGSQALGLDGEIGNFEVGKEFDAILINPKASDS-PID-LFYGDFFGDIS-EAVIQKFLYLG 454 (476)
T ss_dssp TTSSSSCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTCTTC-SCC-CCTHHHHSSST-THHHHHHHHHC
T ss_pred ccCCCCcCCHHHHHHHHHHHHHHHhCCCCCcceeCCCCCCCEEEEcCCCCCC-ccc-cccccccCCch-hcHHHHHhhcC
Confidence 125899999999999999999999 668999999999999999885321 000 0 000111 3344443332
Q ss_pred --eEEEEEEECCeEEEecCc
Q 013050 420 --GKVLATISRGNLVYKEGN 437 (450)
Q Consensus 420 --~~v~~v~v~G~~v~~~g~ 437 (450)
.+|..|||+|++||+.+.
T Consensus 455 ~~~~V~~v~v~G~~v~~~~~ 474 (476)
T 4aql_A 455 DDRNIEEVYVGGKQVVPFSS 474 (476)
T ss_dssp CGGGEEEEEETTEEEECCC-
T ss_pred CCCCccEEEECCEEEecCCC
Confidence 359999999999998754
No 41
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=100.00 E-value=7.6e-32 Score=263.15 Aligned_cols=350 Identities=17% Similarity=0.182 Sum_probs=203.9
Q ss_pred ceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCc-------------------------
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE------------------------- 57 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~------------------------- 57 (450)
.++|+|+||||++|++..+.+ .++.++||++|++|+|||||+|+|+.......
T Consensus 23 ~~~v~I~~g~I~~vg~~~~~~--~~~~~viD~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 100 (430)
T 1ra0_A 23 LWQIHLQDGKISAIDAQSGVM--PITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLT 100 (430)
T ss_dssp EEEEEEETTEEEEEEEESSCC--CCCTTEEECTTCEEESCEEEEEECTTTTTCTTSSSCCSSCCHHHHHHHHHHHHTTCC
T ss_pred eeEEEEECCEEEEeecCCCCC--CCCcceEccCCCEecccccccccchhhhhhcCCCcCCCCCCHHHHHHHhHHhhhhcC
Confidence 578999999999999765432 13568999999999999999999996532110
Q ss_pred ccchHH----HHHHHHhCCceEEEeCCCCC-CCCCCcHHHHHHHHHHHhcCCceEEEEecccc--C-CCccchHHHHHHH
Q 013050 58 WEGFPS----GTKAAAAGGITTLIDMPLNS-DPSTISTETLKLKVDAAEKRIYVDVGFWGGLV--P-ENAYNASALEALL 129 (450)
Q Consensus 58 ~~~~~~----~~~~~~~~GvT~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~ 129 (450)
.+++.. ..++++++|||++++++ +. .+.......+....+.. ...+.+..+.... . ......+.++++.
T Consensus 101 ~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (430)
T 1ra0_A 101 HDDVKQRAWQTLKWQIANGIQHVRTHV-DVSDATLTALKAMLEVKQEV--APWIDLQIVAFPQEGILSYPNGEALLEEAL 177 (430)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEEEE-ECCSTTCHHHHHHHHHHHHH--TTTCEEEEEEECTTCSSSSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCccEEeecc-ccCChHHHHHHHHHHHHHhh--hhhEEEEEEecCCcccccCchHHHHHHHHH
Confidence 011222 23466899999999986 33 22211122222221221 2333443221100 0 1122345577777
Q ss_pred HcCCcEEEEecccCCCCCCCC---CCHHHHHHHHHHHHhcCCcEEEecCChh-hhhhhhhhccCcCCccccccccCCCCh
Q 013050 130 NAGVLGLKSFMCPSGINDFPM---TNASHIKEGLSVLARYKRPLLVHAEMEK-GSERHVKLEDDTLDTRSYSTYLKTRPP 205 (450)
Q Consensus 130 ~~g~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~a~~~g~~v~~H~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~ 205 (450)
+.|...+ .+... .+. .+.+.++++++.|+++|+++.+|+.+.. ...
T Consensus 178 ~~g~~~~-~~~~~-----~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~------------------------ 227 (430)
T 1ra0_A 178 RLGADVV-GAIPH-----FEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQS------------------------ 227 (430)
T ss_dssp HTTCSEE-CCCGG-----GSSSHHHHHHHHHHHHHHHHHHTCEEEEEECCSSCTTC------------------------
T ss_pred HhCCCeE-eeeec-----ccccccccHHHHHHHHHHHHHcCCCEEEEECCCCchhH------------------------
Confidence 7764332 21111 122 5778999999999999999999995422 100
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhH-----HHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCc
Q 013050 206 SWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASS-----SLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTR 280 (450)
Q Consensus 206 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~-----~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 280 (450)
..++...+.+.+. + . +.+.++.|+....+ ..+.++.+++.|+.+. +||......... ..
T Consensus 228 ----~~~~~~~~~~~~~---g-~-~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~gv~v~--~~p~~~~~~~~~---~~-- 291 (430)
T 1ra0_A 228 ----RFVETVAALAHHE---G-M-GARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFV--ANPLVNIHLQGR---FD-- 291 (430)
T ss_dssp ----CHHHHHHHHHHHH---T-C-GGGEEEEECGGGGGSCHHHHHHHHHHHHHHTCEEE--ECHHHHHHHTTT---TC--
T ss_pred ----HHHHHHHHHHHHh---C-C-CCCEEEEeccccccCChHhHHHHHHHHHHcCCEEE--ECchhhhhhccc---cC--
Confidence 0012222333322 0 1 44577788765311 2257777777776544 476532221111 01
Q ss_pred eEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHh--cCCCHHHH
Q 013050 281 FKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK--YGVTLEQL 358 (450)
Q Consensus 281 ~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~gls~~~a 358 (450)
..|+.+... .++.+++.|+.+++|||+.+... .. ......... +..... ... .++|++++
T Consensus 292 --~~p~~~~~~---~~~~~~~~Gv~~~lgTD~~~~~~-~~----------~~~~~~~~~-~~~~~~-~~~~~~~~~~~~a 353 (430)
T 1ra0_A 292 --TYPKRRGIT---RVKEMLESGINVCFGHDGVFDPW-YP----------LGTANMLQV-LHMGLH-VCQLMGYGQINDG 353 (430)
T ss_dssp --CSSCCCCCC---CHHHHHHTTCCEEECCBCSSBTT-BS----------CCCCCHHHH-HHHHHH-HTTCCSHHHHHGG
T ss_pred --CCCCcCCCC---CHHHHHHCCCEEEEeCCCCcccC-CC----------CCCCCHHHH-HHHHHH-HHccCCcccHHHH
Confidence 123322221 24577889999999999763100 00 000011111 111110 111 13589999
Q ss_pred HHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCcc
Q 013050 359 ASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNH 438 (450)
Q Consensus 359 l~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~ 438 (450)
++++|.|||+++|+++ |+|++||.|||||+|.+.++.. + ....+|..||++|++||++|++
T Consensus 354 l~~~T~~~A~~lg~~~-G~i~~G~~ADlvv~d~~~~~~~-----~-------------~~~~~v~~v~~~G~~v~~~~~~ 414 (430)
T 1ra0_A 354 LNLITHHSARTLNLQD-YGIAAGNSANLIILPAENGFDA-----L-------------RRQVPVRYSVRGGKVIASTQPA 414 (430)
T ss_dssp GGGGTHHHHHHTTCSS-CSSCTTSBCCEEEESSSSHHHH-----H-------------HHTCCCSEEEETTEEEEECCCC
T ss_pred HHHHHHHHHHHhCCCC-cccCCCCcCCEEEEcCCChhHH-----H-------------hccCcceEEEECCEEEecCCcc
Confidence 9999999999999955 9999999999999998754311 0 0114788999999999999998
Q ss_pred cC
Q 013050 439 AP 440 (450)
Q Consensus 439 ~~ 440 (450)
+.
T Consensus 415 ~~ 416 (430)
T 1ra0_A 415 QT 416 (430)
T ss_dssp CE
T ss_pred ee
Confidence 73
No 42
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=100.00 E-value=1e-30 Score=251.91 Aligned_cols=343 Identities=21% Similarity=0.276 Sum_probs=202.4
Q ss_pred ceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCC---cccchHHHHHHHHhCCceEEEeC
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---EWEGFPSGTKAAAAGGITTLIDM 79 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~---~~~~~~~~~~~~~~~GvT~~~~~ 79 (450)
.++|+|+||+|++|++..+... ..+.++||++|++|+|||||+|+|+...+.. ...+.....+.++++|+|+++++
T Consensus 25 ~~~v~i~~g~I~~ig~~~~~~~-~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~ 103 (390)
T 1onw_A 25 ICDVLVANGKIIAVASNIPSDI-VPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVGL 103 (390)
T ss_dssp ECEEEEETTEEEEEETTCCTTS-SSSCEEEECTTCEEEECEEEEEECTTCCBCTTSGGGBCCCCCHHHHHHTTEEEEEEC
T ss_pred cceEEEECCEEEEEecCcccCC-CCCCeEEeCCCCEECcCeeEeeECccccCccccccccCHHHHHHHHHHCCeeEEecC
Confidence 4689999999999997543110 1346799999999999999999998543211 01112234678899999999999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhcCCceEEEEecccc-CCC--ccch-HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHH
Q 013050 80 PLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV-PEN--AYNA-SALEALLNAGVLGLKSFMCPSGINDFPMTNASH 155 (450)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 155 (450)
+ ++.+.....+.+....+.........+...+... +.. .... ..+ .+. ....+++..+.+. ..+..+.++
T Consensus 104 ~-~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~-~~~-~~~~g~~~~~~~~---~~~~~~~~~ 177 (390)
T 1onw_A 104 L-GTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDV-AII-DRVIGVKCAISDH---RSAAPDVYH 177 (390)
T ss_dssp C-CSCCSSCCHHHHHHHHHHHHHHTSEEEEEEECSCSSCCCSSSCHHHHH-HHC-TTEEEEEEEESST---TSCCCCHHH
T ss_pred C-CcccccCcHHHHHHHHHHHHhcCCceEEeccccCCCchhhhhhhcchh-hhH-HHhhcceeeecCC---CCCCCCHHH
Confidence 7 5555555555544444443322222232222221 111 1111 111 111 1222333333221 123567888
Q ss_pred HHHHHHHHHhcCC------cEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCC
Q 013050 156 IKEGLSVLARYKR------PLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAE 229 (450)
Q Consensus 156 l~~~~~~a~~~g~------~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (450)
++++++.+++.+. .+.+|..... ..++.+.++.+..
T Consensus 178 l~~~~~~a~~~~~~~~~~g~~~~h~~~~~-------------------------------~~~~~~~~~~~~g------- 219 (390)
T 1onw_A 178 LANMAAESRVGGLLGGKPGVTVFHMGDSK-------------------------------KALQPIYDLLENC------- 219 (390)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEEECSCT-------------------------------TTTHHHHHHHHTC-------
T ss_pred HHHHHHHHhhhhhhhccCceEEEEeCCCH-------------------------------HHHHHHHHHHhcc-------
Confidence 8888888776543 3667762211 0123444444432
Q ss_pred CceE---EEEecCChhHHH-HHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCe
Q 013050 230 GAHL---HIVHLSDASSSL-DLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHI 305 (450)
Q Consensus 230 ~~~~---~~~h~~~~~~~~-~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~ 305 (450)
+.++ +..|+...+... +.++.+++.+. +.+. ++ ..|+ ......++++++.|+.
T Consensus 220 ~~~v~~l~~~h~~~~~~~~~~~~~~~~~~~~-~~~~-~~------------------~~~~---~~~~~~l~~~~~~g~~ 276 (390)
T 1onw_A 220 DVPISKLLPTHVNRNVPLFEQALEFARKGGT-IDIT-SS------------------IDEP---VAPAEGIARAVQAGIP 276 (390)
T ss_dssp CCCGGGEEEECGGGSHHHHHHHHHHHHTTCC-EEEE-TT------------------CCSS---SCHHHHHHHHHHTTCC
T ss_pred CCceEEeeccccccCHHHHHHHHHHHhcCCc-cccc-cc------------------cCCC---CcCHHHHHHHHHcCCC
Confidence 3322 235664331222 34444444332 1110 11 1122 1456778999999974
Q ss_pred ---eEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCC
Q 013050 306 ---DMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGN 382 (450)
Q Consensus 306 ---~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~ 382 (450)
++++||+.+..+... ..+. ..+.|..+....+..+.......++|++++++++|.|||++||+++.|+|++|+
T Consensus 277 ~d~i~l~TD~~~~~~~~~--~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~npA~~~gl~~~G~i~~G~ 352 (390)
T 1onw_A 277 LARVTLSSDGNGSQPFFD--DEGN--LTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFLNLTGKGEILPGN 352 (390)
T ss_dssp GGGEEEECCBTCC-----------------CCCCSHHHHHHHHHHHHHHCCCHHHHHGGGTHHHHHHTTCTTCSSCCTTS
T ss_pred ccceEEEccCCCCCcccC--Cccc--cccccCCCHHHHHHHHHHHHHHcCCCHHHHHHHHhHHHHHHhCCCCCcccCCCC
Confidence 699999875432111 0111 123355556666666555455679999999999999999999996689999999
Q ss_pred CccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCcccCCCCCcc
Q 013050 383 HADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGSP 446 (450)
Q Consensus 383 ~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~g~~ 446 (450)
+|||+|+|.+ + .|..||++|++||++|+++.+ |+|
T Consensus 353 ~ADlvv~d~~--~-------------------------~v~~v~~~G~~v~~~g~~~~~--g~~ 387 (390)
T 1onw_A 353 DADLLVMTPE--L-------------------------RIEQVYARGKLMVKDGKACVK--GTF 387 (390)
T ss_dssp BCCEEEECTT--C-------------------------CEEEEEETTEEEEETTEESSC--CTT
T ss_pred cCCEEEEcCC--C-------------------------cEEEEEECCEEEEECCeEccc--ccc
Confidence 9999999954 1 578999999999999999865 765
No 43
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=99.98 E-value=2.6e-31 Score=258.75 Aligned_cols=330 Identities=18% Similarity=0.167 Sum_probs=185.0
Q ss_pred ceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcc------------------------
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW------------------------ 58 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~------------------------ 58 (450)
.++|+|+||||++|++..+.. ..+..++||++|++|+|||||+|+|+........
T Consensus 37 ~~~v~I~~g~I~~vg~~~~~~-~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~~g~~~~~~~~~gggi~~~ 115 (421)
T 2bb0_A 37 DAVVGIHEQKIVFAGQKGAEA-GYEADEIIDCSGRLVTPGLVDPHTHLVFGGSREKEMNLKLQGISYLDILAQGGGILST 115 (421)
T ss_dssp EEEEEEETTEEEEEEETTTTT-TCEEEEEEECTTCEEEECEEECCBCCCCCSCCGGGHHHHHTTCCHHHHHHTTCTHHHH
T ss_pred cceEEEECCEEEEEecccccc-cCCCCeEEeCCCCEeccCeeccCcCccccccchHHHHHHHhCCCHHHHhhcCCCcccc
Confidence 578999999999999754100 0023579999999999999999999965432110
Q ss_pred ---------cchH----HHHHHHHhCCceEEEeCCCCCCCCCC-cHHHHHHHHHHHhcCCceEEE--Eeccc--cCCCc-
Q 013050 59 ---------EGFP----SGTKAAAAGGITTLIDMPLNSDPSTI-STETLKLKVDAAEKRIYVDVG--FWGGL--VPENA- 119 (450)
Q Consensus 59 ---------~~~~----~~~~~~~~~GvT~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~- 119 (450)
+.+. ...+.++++|||++.++. ....... ....+... +.......+++. ..+.. .....
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (421)
T 2bb0_A 116 VKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKS-GYGLEKETELKQLRVA-KKLHESQPVDLVSTFMGAHAIPPEYQN 193 (421)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEEC-CSCCSHHHHHHHHHHH-HHHHHHSSSEEEEEEEEESSCCGGGTT
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHhcCceEEEecc-ccCcCccchHHHHHHH-HHHHhhcCceEEEEeeccccCChhhcc
Confidence 0011 123678899999999853 1111000 01112222 222111122222 11111 11000
Q ss_pred ---cchHHH----HHHHHcC-CcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcC
Q 013050 120 ---YNASAL----EALLNAG-VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTL 191 (450)
Q Consensus 120 ---~~~~~~----~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~ 191 (450)
...+.+ ..+...+ +..++.+.. ....+.+.++++++.|+++|+++.+|+.....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~e~l~~~~~~a~~~g~~v~~H~~~~~~------------ 255 (421)
T 2bb0_A 194 DPDDFLDQMLSLLPEIKEQELASFADIFTE------TGVFTVSQSRRYLQKAAEAGFGLKIHADEIDP------------ 255 (421)
T ss_dssp CHHHHHHHHHTTHHHHHHTTCCSEEEEBBC------TTSBCHHHHHHHHHHHHHTTCEEEEEECSSSC------------
T ss_pred cHHHHHHHHHHhhHHhhccCccccccccCC------cCCCCHHHHHHHHHHHHHCCCCEEEEeccccc------------
Confidence 011111 1111222 223332211 12467899999999999999999999843210
Q ss_pred CccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccc
Q 013050 192 DTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSA 271 (450)
Q Consensus 192 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~ 271 (450)
. ..++ .+.+. +. ..+.|+.. -..+.++.+++.|+.+ ..+|.......
T Consensus 256 -----------~------~~~~----~~~~~-------g~-~~~~H~~~--~~~~~i~~~~~~g~~~--~~~p~~~~~l~ 302 (421)
T 2bb0_A 256 -----------L------GGAE----LAGKL-------KA-VSADHLVG--TSDEGIKKLAEAGTIA--VLLPGTTFYLG 302 (421)
T ss_dssp -----------C------SHHH----HHHHT-------TC-SEEEECTT--CCHHHHHHHHHHTCEE--EECHHHHHHTT
T ss_pred -----------c------CHHH----HHHHc-------CC-cEEhhhhc--CCHHHHHHHHHcCCeE--EECCchhhhhc
Confidence 0 0011 11211 21 23566654 2234566666666544 44665432110
Q ss_pred cccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCC-ChhhhcccCCCccccCCCCcchhhHHHHHHHHHHh
Q 013050 272 EEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT-VPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK 350 (450)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 350 (450)
+. ....+..+++.|+.+++|||+.+. ++.. ..+..+......
T Consensus 303 ------~~------------~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~-------------------~~~~~~~~~~~~ 345 (421)
T 2bb0_A 303 ------KS------------TYARARAMIDEGVCVSLATDFNPGSSPTE-------------------NIQLIMSIAALH 345 (421)
T ss_dssp ------CC------------CCCCHHHHHHTTCCEEECCCBBTTTBCCC-------------------CHHHHHHHHHHH
T ss_pred ------cc------------ccchHHHHHHCCCeEEEeCCCCCCCCccc-------------------CHHHHHHHHhcc
Confidence 00 001245678899999999997542 1110 111122222346
Q ss_pred cCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECC
Q 013050 351 YGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRG 429 (450)
Q Consensus 351 ~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G 429 (450)
.++|++++|+|+|.|||+++|+ +++|+|+|||+|||||+|.|+...+. +.. ...+|..|||+|
T Consensus 346 ~~ls~~eal~~~T~~~A~~lg~~~~~Gsl~~Gk~ADlvvld~~~~~~~~------~~~----------~~~~v~~t~v~G 409 (421)
T 2bb0_A 346 LKMTAEEIWHAVTVNAAYAIGKGEEAGQLKAGRSADLVIWQAPNYMYIP------YHY----------GVNHVHQVMKNG 409 (421)
T ss_dssp SCCCHHHHHHHTTHHHHHHTTCTTTSSCCSTTSBCCEEEESSSSTTHHH------HSC----------SSCCEEEEEETT
T ss_pred cCCCHHHHHHHHHHHHHHHhCccCCccccCCCCcCCEEEECCcccccCH------hHc----------CCCceEEEEECC
Confidence 7899999999999999999999 67999999999999999987532211 100 013799999999
Q ss_pred eEEEec-Cccc
Q 013050 430 NLVYKE-GNHA 439 (450)
Q Consensus 430 ~~v~~~-g~~~ 439 (450)
++||+. |+++
T Consensus 410 ~~v~~~~g~~~ 420 (421)
T 2bb0_A 410 TIVVNREGAIL 420 (421)
T ss_dssp EEEEEC-----
T ss_pred EEEEeCCcccc
Confidence 999975 7665
No 44
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=99.98 E-value=3.7e-31 Score=257.15 Aligned_cols=330 Identities=18% Similarity=0.202 Sum_probs=189.3
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCc------------------------
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE------------------------ 57 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~------------------------ 57 (450)
..++|+|+||||++|++..+.+. ..+.++||++|++|+|||||+|+|+.......
T Consensus 28 ~~~~v~I~~g~I~~vg~~~~~~~-~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~ 106 (416)
T 2q09_A 28 EPHALGVHEGRIHALVPMQDLKG-PYPAHWQDMKGKLVTPGLIDCHTHLIFAGSRAEEFELRQKGVPYAEIARKGGGIIS 106 (416)
T ss_dssp SSEEEEEETTEEEEEEEGGGCC---CCTTSEECTTCEEEECEEEEEECCCCCSCCHHHHHHHHTTCCHHHHHHTTCTHHH
T ss_pred ccceEEEECCEEEEEcChhhccc-cCCCeEEeCCCCEECCcccccccCcchhhhhHHHHHHHHhcCCHHHhhhcCCcEee
Confidence 45789999999999997644321 12457999999999999999999997654310
Q ss_pred ---------ccchH----HHHHHHHhCCceEEEeCCCCCC-CCCCcHHHHHHHHHHHhcCCceEEE--Eecc--ccCC-C
Q 013050 58 ---------WEGFP----SGTKAAAAGGITTLIDMPLNSD-PSTISTETLKLKVDAAEKRIYVDVG--FWGG--LVPE-N 118 (450)
Q Consensus 58 ---------~~~~~----~~~~~~~~~GvT~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~-~ 118 (450)
.+.+. ...+.++++|||++.+++ ... +.......+....+.... ..+++. ..+. .... .
T Consensus 107 ~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~~~~ 184 (416)
T 2q09_A 107 TVRATRAASEDQLFELALPRVKSLIREGVTTVEIKS-GYGLTLEDELKMLRVARRLGEA-LPIRVKTTLLAAHAVPPEYR 184 (416)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEEC-CSCCSHHHHHHHHHHHHHHHHH-SSSEEEEEEEEETSCCGGGT
T ss_pred hhhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEecc-CcccChHhHHHHHHHHHHHHhh-CCceEEEeeeccccCCcccc
Confidence 01111 124678899999999974 211 100111122222222111 222222 1111 1110 0
Q ss_pred c---cchHH-----HHHHHHcC-CcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccC
Q 013050 119 A---YNASA-----LEALLNAG-VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDD 189 (450)
Q Consensus 119 ~---~~~~~-----~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~ 189 (450)
. ...+. +..+...+ +..++.+. +.+..+.+.+.++++.|+++|+++.+|+.....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~---------- 248 (416)
T 2q09_A 185 DDPDSWVETICQEIIPAAAEAGLADAVDVFC------EHIGFSLAQTEQVYLAADQYGLAVKGHMDQLSN---------- 248 (416)
T ss_dssp TCHHHHHHHHHHTHHHHHHHTTCCSEEEEBB------STTSBCHHHHHHHHHHHHHTTCEEEEEESSSCC----------
T ss_pred CCHHHHHHHHHhhhhHHHHhccccccccccc------CCCcCCHHHHHHHHHHHHHCCCcEEEEECCCCc----------
Confidence 0 11111 11222233 33333321 113568899999999999999999999953210
Q ss_pred cCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcc
Q 013050 190 TLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAF 269 (450)
Q Consensus 190 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 269 (450)
. ..++. +.+. +. ..+.|+... ..+.++.+++.|+.+ ..+|.....
T Consensus 249 -------------~------~~~~~----~~~~-------g~-~~~~H~~~~--~~~~~~~~~~~g~~~--~~~p~~~~~ 293 (416)
T 2q09_A 249 -------------L------GGSTL----AANF-------GA-LSVDHLEYL--DPEGIQALAHRGVVA--TLLPTAFYF 293 (416)
T ss_dssp -------------C------SHHHH----HHHT-------TC-SEEEECTTC--CHHHHHHHHHHTCEE--EECHHHHHH
T ss_pred -------------h------HHHHH----HHHc-------CC-CEEeecccC--CHHHHHHHHHcCCeE--EEcCccHHh
Confidence 0 01111 1221 22 224555542 224556666666544 447754322
Q ss_pred cccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHH
Q 013050 270 SAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR 349 (450)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 349 (450)
.. + ...+ .+..+++.|+.+++|||+.+.... ....+..+.....
T Consensus 294 ~~------~---~~~~---------~~~~~~~~Gv~~~~gtD~~~~~~~------------------~~~~~~~~~~~~~ 337 (416)
T 2q09_A 294 LK------E---TKLP---------PVVALRKAGVPMAVSSDINPGTAP------------------IVSLRMAMNMACT 337 (416)
T ss_dssp TT------C---CCCC---------CHHHHHHTTCCEEECCCCBTTTBC------------------CCCHHHHHHHHHH
T ss_pred hc------c---cccc---------CHHHHHHCCCeEEEecCCCCccCC------------------CCCHHHHHHHHHH
Confidence 10 0 0011 245678899999999997542100 0011222222234
Q ss_pred hcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEEC
Q 013050 350 KYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISR 428 (450)
Q Consensus 350 ~~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~ 428 (450)
..++|++++++++|.|||+++|+ +++|+|++||.|||||+|.++...+ ++.. ...+|..||++
T Consensus 338 ~~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~--------------~~~~--~~~~v~~v~v~ 401 (416)
T 2q09_A 338 LFGLTPVEAMAGVTRHAARALGEQEQLGQLRVGMLADFLVWNCGHPAEL--------------SYLI--GVDQLVSRVVN 401 (416)
T ss_dssp HHCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSSCTTHH--------------HHSC--SCCCEEEEEET
T ss_pred HcCCCHHHHHHHHHHHHHHHhCCCccceecCCCCCccEEEECCCchhhh--------------hhhh--ccCcceEEEEC
Confidence 67899999999999999999999 6689999999999999998753211 1111 12479999999
Q ss_pred CeEEEecCc
Q 013050 429 GNLVYKEGN 437 (450)
Q Consensus 429 G~~v~~~g~ 437 (450)
|++||+++-
T Consensus 402 G~~v~~~~~ 410 (416)
T 2q09_A 402 GEETLHGEG 410 (416)
T ss_dssp TEECCC---
T ss_pred CEEEEeCCC
Confidence 999998764
No 45
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=99.98 E-value=6e-31 Score=257.51 Aligned_cols=351 Identities=15% Similarity=0.104 Sum_probs=193.3
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCC---C------cc--------------
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR---T------EW-------------- 58 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~---~------~~-------------- 58 (450)
.+++|+|+||||++|++....+ +++.++||++|++|+|||||+|+|+..... . .|
T Consensus 30 ~~~~v~I~~g~I~~ig~~~~~~--~~~~~viD~~G~~v~PGlID~H~H~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~ 107 (439)
T 2i9u_A 30 KDSYIVVIDGKIASVSSNLPDK--YKGNPIIDFRNNIIIPGMNDLHAHASQYKNLGIGMDKELLPWLNNYTFPEEAKFLN 107 (439)
T ss_dssp EEEEEEEETTEEEEEESSCCGG--GTTSCEEEEEEEEEEECEEEEEEEGGGGGGTTCCCSSCHHHHHHHTHHHHHHGGGS
T ss_pred eccEEEEECCEEEEeccccccc--CCCceEEcCCCeEEEecceecccccchHhhhCCcCCCCHHHHHHhcccchhhccCC
Confidence 3678999999999999643211 135689999999999999999999975311 0 00
Q ss_pred -cchHH----HHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhc-CCceEE--EEeccccC-C---C-ccchHHH
Q 013050 59 -EGFPS----GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYVDV--GFWGGLVP-E---N-AYNASAL 125 (450)
Q Consensus 59 -~~~~~----~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~-~---~-~~~~~~~ 125 (450)
+.+.. ..+.++++|||++++++ +. ..+......+.... ...... .......+ . . ....+..
T Consensus 108 ~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~-----~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~p~~~~~~~~~~~~~~ 181 (439)
T 2i9u_A 108 VDYAKKTYGRLIKDLIKNGTTRVALFA-TL-----HKDSTIELFNMLIKSGIGAYVGKVNMDYNCPDYLTENYITSLNDT 181 (439)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEEEC-CS-----CHHHHHHHHHHHHHHTCEEEEECEECCSSCCTTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCceEEEEcc-cc-----ccchHHHHHHHHHHcCCEEEEEeeeccccCCcccchhHHHHHHHH
Confidence 01111 13578999999999985 22 22222222222221 111111 11110001 0 0 0122233
Q ss_pred HHHHH---cCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCh-hhhhhhhhhccCcCCccccccccC
Q 013050 126 EALLN---AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME-KGSERHVKLEDDTLDTRSYSTYLK 201 (450)
Q Consensus 126 ~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 201 (450)
.++++ .+...++.+..+. ..+.++.+.++++++.|+++|+++.+|+.+. ......+...+
T Consensus 182 ~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~------------- 245 (439)
T 2i9u_A 182 EEIILKYKDKSNIVKPIITPR---FVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAVVKSLHK------------- 245 (439)
T ss_dssp HHHHHHHTTTCSSEEECBEEC---CGGGCCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHCT-------------
T ss_pred HHHHHHHhCCCCceEEEEecC---CcCcCCHHHHHHHHHHHHhcCCcEEEeecCChHHHHHHHHHhC-------------
Confidence 33333 2222334433321 1135688999999999999999999999643 22111111100
Q ss_pred CCChHHHHHHHHHHHHHHHhhccCCCCCC-ceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCc
Q 013050 202 TRPPSWEEAAIRELLTVAKDTRTDGPAEG-AHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTR 280 (450)
Q Consensus 202 ~~p~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 280 (450)
..|. .++.+.+. + ..+ .+..+.|+... +.+.++.+++.|+. +.+||...... +
T Consensus 246 ~~~~---------~~~~~~~~---g-~~~~~~~~i~H~~~~--~~~~~~~l~~~g~~--~~~~p~~~~~l-------~-- 299 (439)
T 2i9u_A 246 KSNF---------YGEVYDKF---G-LFGNTPTLMAHCIHS--SKEEINLIKRNNVT--IVHCPTSNFNL-------G-- 299 (439)
T ss_dssp TCSS---------HHHHHHHT---T-CSSSSCEEEEECCSC--CHHHHHHHHHTTCE--EEECHHHHHHT-------T--
T ss_pred CCCC---------HHHHHHHc---C-CCCCCCeEEEEEecC--CHHHHHHHHHcCCE--EEECccchhhc-------c--
Confidence 0000 11122221 0 112 34556666542 12356666667754 44477543211 0
Q ss_pred eEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHH-------hcCC
Q 013050 281 FKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-------KYGV 353 (450)
Q Consensus 281 ~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~gl 353 (450)
...+ .++.+++.|+.++++||+.+.. ...++ .+..+...++... ..++
T Consensus 300 -~~~~---------~~~~~~~~Gv~~~lgtD~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~l 354 (439)
T 2i9u_A 300 -SGMM---------PVRKYLNLGINVVLGSDISAGH-TCSLF--------------KVIAYAIQNSKIKWQESGKKDMFL 354 (439)
T ss_dssp -CCCC---------CHHHHHHTTCEEEECCCBTTBC-CSCHH--------------HHHHHHHHHHHHHHHHTTSCSCCC
T ss_pred -cccC---------CHHHHHHCCCcEEEecCCCCCC-CcCHH--------------HHHHHHHHHhccccccccCCCCCC
Confidence 0011 2346688999999999975421 00000 0011111111111 3689
Q ss_pred CHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEe---eEEEEEEECCe
Q 013050 354 TLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLS---GKVLATISRGN 430 (450)
Q Consensus 354 s~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~v~v~G~ 430 (450)
|++++++++|.|||+++| ++|+|+|||.|||||+|.++.+.. .. .. ++|+.+..+. .+|..||++|+
T Consensus 355 s~~~al~~~T~~~A~~lg--~~Gsl~~G~~ADlvvld~~~~~~~-~~------~~-~~~~~~~~~~~~~~~v~~v~v~G~ 424 (439)
T 2i9u_A 355 STSEAFYMATKKGGSFFG--KVGSFEEGYDFDALVINDSNLYPE-DY------DL-TERLERFIYLGDDRNIMKRYVCGN 424 (439)
T ss_dssp CHHHHHHHHTHHHHTTTS--SCSSCSTTCBCCEEEECCTTSCGG-GS------CH-HHHHHHHHHHCCGGGEEEEEETTE
T ss_pred CHHHHHHHHHHHHHHHhc--cCCccCCCCccCEEEEeCCCcccc-CC------Cc-cCHHHHheecCCCCCeeEEEECCE
Confidence 999999999999999999 699999999999999998864432 10 11 3333333222 37999999999
Q ss_pred EEEecCc
Q 013050 431 LVYKEGN 437 (450)
Q Consensus 431 ~v~~~g~ 437 (450)
+||++++
T Consensus 425 ~v~~~~~ 431 (439)
T 2i9u_A 425 EIFGPKF 431 (439)
T ss_dssp EEC----
T ss_pred EEeeCCC
Confidence 9998764
No 46
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=99.98 E-value=1.1e-31 Score=262.46 Aligned_cols=334 Identities=21% Similarity=0.249 Sum_probs=209.2
Q ss_pred cceeEEEeCCEEEEeccCCCCC---------CCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCC
Q 013050 2 CKRAVEIKEGNIISIVSEEDWP---------RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGG 72 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~---------~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~G 72 (450)
++++|+|+||||++|++..+.. ...++.++||++|++|+|||||+|+|+..++. .+.++++|
T Consensus 83 ~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~Pg~---------~~aAl~gG 153 (570)
T 4ac7_C 83 YKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINPDQ---------VDVALANG 153 (570)
T ss_dssp EEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCTTH---------HHHHHHTT
T ss_pred EEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEecccccCCcch---------HHHHHhcC
Confidence 4689999999999999864321 01246789999999999999999999977652 36789999
Q ss_pred ceEEEeCCC------CCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCcEEEEecccCCCC
Q 013050 73 ITTLIDMPL------NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIN 146 (450)
Q Consensus 73 vT~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 146 (450)
|||+++.+. +..+.......+....+... ...+++.+++... ....+.+.++.+.|+.+++.+..+
T Consensus 154 vTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~-~~~v~~~~~g~~~---~~~l~el~el~~aGa~gfK~~~~~---- 225 (570)
T 4ac7_C 154 ITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTE-GLPINVGILGKGH---GSSIAPIMEQIDAGAAGLKIHEDW---- 225 (570)
T ss_dssp EEEEEEECSSSCHHHHHSSCCCHHHHHHHHHHHHT-TCSSEEEEEEECC---CSSHHHHHHHHHHTCCEEEEEGGG----
T ss_pred CeEEEecCcCcccccCCcCcCCcHHHHHHHHHHhh-hCCeeEEEEeccC---CcCHHHHHHHHHcCCCeEeeccCC----
Confidence 999995321 22334455556666655554 4578988887543 234678889999999999998644
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCC
Q 013050 147 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG 226 (450)
Q Consensus 147 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~ 226 (450)
..+.+.+.++++.|+++|+++.+|+++... ...+...++...
T Consensus 226 ---~~~~~~L~~aL~~A~~~g~~V~iHae~l~e-----------------------------~g~Vedalea~~------ 267 (570)
T 4ac7_C 226 ---GATPASIDRSLTVADEADVQVAIHSDTLNE-----------------------------AGFLEDTLRAIN------ 267 (570)
T ss_dssp ---CCCHHHHHHHHHHHHHHTCEEEEECCTTCS-----------------------------SCCHHHHHHHHT------
T ss_pred ---CCCHHHHHHHHHHHHHcCCEEEEEcCCcch-----------------------------hhHHHHHHHHhC------
Confidence 368899999999999999999999974321 001233333333
Q ss_pred CCCCceEEEEecCChh--HHHHHHHHHHhCCCcEEEec-CcchhcccccccCCC----CCceEEcCCC---------C-C
Q 013050 227 PAEGAHLHIVHLSDAS--SSLDLLMEAKTNGDSITVET-CPHYLAFSAEEIPDG----DTRFKCAPPI---------R-D 289 (450)
Q Consensus 227 ~~~~~~~~~~h~~~~~--~~~~~~~~~~~~g~~v~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~---------~-~ 289 (450)
+..+|..|..... ...+.++.+...+ +.... .|. .......+..+ -.+.+..+.+ + .
T Consensus 268 ---Gr~ih~~HiEgag~~hapd~i~~~~~~~--vlps~t~Pt-~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~~a~~Rir 341 (570)
T 4ac7_C 268 ---GRVIHSFHVEGAGGGHAPDIMAMAGHPN--VLPSSTNPT-RPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIR 341 (570)
T ss_dssp ---TCCEEETTTTSTTSSSTTTGGGGGGSTT--EEEBCCGGG-SSCBTTHHHHHHHHHHHHTTCCTTCHHHHHHHHHHSC
T ss_pred ---CCcceeEeeeccccccChHHHHHhccCC--ccccccCCC-CCcccchhHHhhhheeeecccCccccchhHHHHhhhh
Confidence 5667766665320 1234444444433 33221 111 00000000000 0001111111 0 1
Q ss_pred hhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHH-H----------HhcCCCHHHH
Q 013050 290 AANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-G----------RKYGVTLEQL 358 (450)
Q Consensus 290 ~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~----------~~~gls~~~a 358 (450)
.....+...+++.|+.++++||+...... |.. ....+...... . .+.+++++++
T Consensus 342 ~~~i~a~~~L~d~G~~v~~gSD~p~~~~~--------------ge~-~~~~~~~a~~~~~~rg~l~~~~~~~~~~~~~ea 406 (570)
T 4ac7_C 342 PETIAAEDILHDLGIISMMSTDALAMGRA--------------GEM-VLRTWQTADKMKKQRGPLAEEKNGSDNFRLKRY 406 (570)
T ss_dssp HHHHHHHHHHHHTTSSCBCCCCBTTSSCT--------------TCH-HHHHHHHHHHHHHHHCSCTTCCTTCCHHHHHHH
T ss_pred hhhcccccchhhcCCEEEEECcccccCCc--------------Ccc-cCcHHHHHHHHHHhcCCCCCccccccCCCHHHH
Confidence 11223345577789999999996432110 000 00000000000 0 1234789999
Q ss_pred HHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEec
Q 013050 359 ASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKE 435 (450)
Q Consensus 359 l~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~ 435 (450)
|+++|.|||+++|+ +++|+|++||.||||+||.++. . .+|..||++|++||+.
T Consensus 407 l~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~~-------------------~-----~~v~~t~~~G~~v~~~ 460 (570)
T 4ac7_C 407 VSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKFF-------------------G-----VKADRVIKGGIIAYAQ 460 (570)
T ss_dssp HHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGGT-------------------T-----TSCSEEEETTEEEEEE
T ss_pred HHHHhHHHHHHhCCCCCCcccCCCCccCEEEECchhc-------------------c-----CceEEEEECCEEEEcc
Confidence 99999999999999 6789999999999999996531 0 1567999999999984
No 47
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=99.97 E-value=3.4e-32 Score=263.64 Aligned_cols=333 Identities=17% Similarity=0.131 Sum_probs=186.8
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCC-----------------------cc
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-----------------------EW 58 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~-----------------------~~ 58 (450)
.+++|+|+||||++|++.. ++.+ ||++|++|+|||||+|+|+...... ..
T Consensus 17 ~~~~v~I~~g~I~~vg~~~------~~~~-iD~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (406)
T 1p1m_A 17 FWGAVEIENGTIKRVLQGE------VKVD-LDLSGKLVMPALFNTHTHAPMTLLRGVAEDLSFEEWLFSKVLPIEDRLTE 89 (406)
T ss_dssp EEEEEEEETTEEEEEEESS------CCCS-EECTTEEEEECEEEEEECGGGGGGTTSSCSCCHHHHHHTTHHHHHTTCCH
T ss_pred ccceEEEECCEEEEeeCCC------Ccce-ecCCCcEEeecccchhhccchhhhccccCCCCHHHHHHhhhccchhcCCH
Confidence 4579999999999999753 2456 9999999999999999999653210 01
Q ss_pred cchHH----HHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccC---CCccchHHHHHHHH-
Q 013050 59 EGFPS----GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP---ENAYNASALEALLN- 130 (450)
Q Consensus 59 ~~~~~----~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~- 130 (450)
+.+.. ..+.++++|||++++++ . ....+....+.. .++......... ...+.++...++++
T Consensus 90 ~~~~~~~~~~~~~~l~~GvTtv~d~~-~------~~~~~~~~~~~~----g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
T 1p1m_A 90 KMAYYGTILAQMEMARHGIAGFVDMY-F------HEEWIAKAVRDF----GMRALLTRGLVDSNGDDGGRLEENLKLYNE 158 (406)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEE-S------SHHHHHHHHHHH----CCEEEEEEEECCBTTBCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEech-h------CHHHHHHHHHHc----CCEEEEEcccccCCCCHHHHHHHHHHHHHH
Confidence 11222 23567899999999986 2 122222222221 122221111111 12222332222322
Q ss_pred -cCC-cEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC-hhhhhhhhhhccCcCCccccccccCCCChHH
Q 013050 131 -AGV-LGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM-EKGSERHVKLEDDTLDTRSYSTYLKTRPPSW 207 (450)
Q Consensus 131 -~g~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 207 (450)
.+. ..++....+. .....+.+.+.++++.|+++|+++.+|+.. ...+...+
T Consensus 159 ~~~~~~~i~~~~~~~---~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~----------------------- 212 (406)
T 1p1m_A 159 WNGFEGRIFVGFGPH---SPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLE----------------------- 212 (406)
T ss_dssp HTTGGGTEEEEEEEC---CTTTSCHHHHHHHHHHHHHTTCCEEEEESCSTTCCCCTH-----------------------
T ss_pred hhCCCCcEEEEEecC---ccCcCCHHHHHHHHHHHHHCCCcEEEEcCCCchHHHHHH-----------------------
Confidence 121 1233322221 112468899999999999999999999953 22111000
Q ss_pred HHHHHHHHHHH-HHhhccCCCCCCce-EEEEecC---ChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceE
Q 013050 208 EEAAIRELLTV-AKDTRTDGPAEGAH-LHIVHLS---DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFK 282 (450)
Q Consensus 208 ~~~~~~~~~~l-~~~~~~~~~~~~~~-~~~~h~~---~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 282 (450)
+.+.. .++. +.. ..+.|+. .. . .+.++.+ ...+|......
T Consensus 213 ------~~~~~g~~~~-------g~~~~~~~H~~~~~~~-~-~~~~~~~--------~~~~p~~~~~~------------ 257 (406)
T 1p1m_A 213 ------DILNIGLKEV-------KTIAAHCVHLPERYFG-V-LKDIPFF--------VSHNPASNLKL------------ 257 (406)
T ss_dssp ------HHHTTTTTTS-------CEEEEECTTCCGGGTT-T-TTTSSEE--------EEECHHHHHHT------------
T ss_pred ------HhhhCCHhHc-------CcceeEeeeccCcccC-C-HHHHHHH--------HHhCcHHHhhc------------
Confidence 00000 1110 211 2334433 21 0 0011111 12244211100
Q ss_pred EcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHH-hcCCCHHHHHHH
Q 013050 283 CAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLASW 361 (450)
Q Consensus 283 ~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~gls~~~al~~ 361 (450)
.+ ....++++++.|+.+++|||+.+.+...+++ .+..+...+.... ..++|+++++++
T Consensus 258 -~~------~~~~~~~~~~~Gv~~~lgtD~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~ls~~~al~~ 316 (406)
T 1p1m_A 258 -GN------GIAPVQRMIEHGMKVTLGTDGAASNNSLNLF--------------FEMRLASLLQKAQNPRNLDVNTCLKM 316 (406)
T ss_dssp -TC------CCCCHHHHHHTTCEEEECCCCTTTTSCCCHH--------------HHHHHHHHHHHTTCTTSSCHHHHHHH
T ss_pred -CC------CcCcHHHHHhCCCeEEEECCCCcCCCCCCHH--------------HHHHHHHHHhcccCCCCCCHHHHHHH
Confidence 00 1123577888999999999987643211110 0111222222111 568999999999
Q ss_pred HhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceE---eeEEEEEEECCeEEEecCcc
Q 013050 362 WSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRL---SGKVLATISRGNLVYKEGNH 438 (450)
Q Consensus 362 aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~v~v~G~~v~~~g~~ 438 (450)
+|.|||+++|+++ |+|+|||.|||||+|.++++..+.. +|+.+..+ ..+|..||++|++|| +|++
T Consensus 317 ~T~~~A~~lgl~~-G~l~~G~~ADlvv~d~~~~~~~~~~----------~~~~~~~~~~~~~~v~~v~v~G~~v~-~g~~ 384 (406)
T 1p1m_A 317 VTYDGAQAMGFKS-GKIEEGWNADLVVIDLDLPEMFPVQ----------NIKNHLVHAFSGEVFATMVAGKWIYF-DGEY 384 (406)
T ss_dssp HTHHHHHHHTCSC-SSCCTTSBCCEEEEECCSGGGCSGG----------GHHHHHHHTCCSCCSEEEETTEEEEE-TTBC
T ss_pred HHHHHHHHhCCCC-cccCCCCcccEEEEeCCccccCCcc----------ChHHHheEecCCCCceEEEECCEEEE-CCee
Confidence 9999999999965 9999999999999998875443222 11111111 257899999999999 9999
Q ss_pred cCCCCCcc
Q 013050 439 APAACGSP 446 (450)
Q Consensus 439 ~~~~~g~~ 446 (450)
+..+.++.
T Consensus 385 ~~~d~~~~ 392 (406)
T 1p1m_A 385 PTIDSEEV 392 (406)
T ss_dssp TTSCHHHH
T ss_pred CCCCHHHH
Confidence 87665443
No 48
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=99.97 E-value=2.4e-30 Score=259.86 Aligned_cols=313 Identities=21% Similarity=0.193 Sum_probs=206.1
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCC
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPL 81 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~ 81 (450)
..++|+|+||||++|++.... ..+.++||++|++|+|||||+|+|+..+.. +.....+.++.+|||++++++
T Consensus 53 ~~~dI~I~~G~I~~Vg~~~~~---~~~~~vID~~G~~v~PG~ID~H~Hl~~~~~----~~~~~~~~al~~GvTtvv~~p- 124 (608)
T 3nqb_A 53 RPADIGIVGALIASVHEPASR---RDAAQVIDAGGAYVSPGLIDTHMHIESSMI----TPAAYAAAVVARGVTTIVWDP- 124 (608)
T ss_dssp EECEEEEETTEEEEEECTTSC---CCEEEEEECTTSEEEECEEEEEECGGGGTS----CHHHHHHHHHTTTEEEEEECC-
T ss_pred EeeEEEEECCEEEEecCCCCC---CCCCeEEeCCCCEEecCeEecccCcccccC----CHHHHHHHHHhCCeEEEEcCC-
Confidence 357999999999999985421 246789999999999999999999975432 355667889999999999876
Q ss_pred CCCCCCCcHHHHHHHHHHHhcCCceEEEEec-cccCC--------CccchHHHHHHHH-cCCcEEEEecccCCCCCCCCC
Q 013050 82 NSDPSTISTETLKLKVDAAEKRIYVDVGFWG-GLVPE--------NAYNASALEALLN-AGVLGLKSFMCPSGINDFPMT 151 (450)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 151 (450)
+..+.....+.+....+.... ...++..+. ...+. .....+.+.++.+ .++.+++.++.+++. ..
T Consensus 125 ~~~~~v~g~~~~~~~l~~a~~-~~~~v~~~~p~~~P~~~~~~~~g~~~~~~el~~l~~~~~v~glgE~~~~~~v----~~ 199 (608)
T 3nqb_A 125 HEFGNVHGVDGVRWAAKAIEN-LPLRAILLAPSCVPSAPGLERGGADFDAAILADLLSWPEIGGIAEIMNMRGV----IE 199 (608)
T ss_dssp HHHHHHHTHHHHHHHHHHHTT-CSSEEEEEECCCSSSSTTSCCCSCCCCHHHHHHHHTSTTEEEEEEECCHHHH----HT
T ss_pred ccccccCCHHHHHHHHHHhhh-cCcEEEEeccccCCCCCccccCcccCCHHHHHHHHhccCcceeeEeeccCCc----CC
Confidence 332222334445554444433 345555443 22221 1124567777776 688888887644321 24
Q ss_pred CHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCc
Q 013050 152 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA 231 (450)
Q Consensus 152 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (450)
..+.+.+.++.|++.|++|.+|++.... ..+...... +.
T Consensus 200 ~d~~l~~~l~~A~~~g~pV~~Ha~~~~~----------------------------------~~L~~~~~a-------Gv 238 (608)
T 3nqb_A 200 RDPRMSGIVQAGLAAEKLVCGHARGLKN----------------------------------ADLNAFMAA-------GV 238 (608)
T ss_dssp TCHHHHHHHHHHHHHTCEEEECCTTCCH----------------------------------HHHHHHHHT-------TC
T ss_pred CcHHHHHHHHHHHHcCCEEEEcCCCCCH----------------------------------HHHHHHHHc-------CC
Confidence 5678899999999999999999964321 112222222 44
Q ss_pred eEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHH----hcCCeeE
Q 013050 232 HLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEAL----MDGHIDM 307 (450)
Q Consensus 232 ~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~g~~~~ 307 (450)
.. .|+... ..+.++.+ +.|..+... .. .......+...+ ..+..++
T Consensus 239 ~~--~H~~~~--~eea~e~l-~~G~~i~i~-gs------------------------~~~~~~~l~~~i~~~~~~g~~v~ 288 (608)
T 3nqb_A 239 SS--DHELVS--GEDLMAKL-RAGLTIELR-GS------------------------HDHLLPEFVAALNTLGHLPQTVT 288 (608)
T ss_dssp CE--ECCCCS--HHHHHHHH-HTTCEEEEE-SS------------------------SGGGHHHHHHHHHHHTSCCTTEE
T ss_pred Ce--eeccCC--HHHHHHHH-HCCCEEEEe-cc------------------------ccccHHHHHHHHHhHhhcCceEE
Confidence 33 676653 23333333 456544432 00 011122233333 3689999
Q ss_pred EcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccEE
Q 013050 308 LSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLV 387 (450)
Q Consensus 308 ~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlv 387 (450)
++||..+..... .. ..+...++.+.+.|++++++++++|.|||++||+++.|+|+||++||||
T Consensus 289 lgTD~~~p~~~~---~~--------------g~l~~~v~~~~~~Gls~~eal~~aT~n~A~~lgl~~~G~i~~G~~ADlv 351 (608)
T 3nqb_A 289 LCTDDVFPDDLL---QG--------------GGLDDVVRRLVRYGLKPEWALRAATLNAAQRLGRSDLGLIAAGRRADIV 351 (608)
T ss_dssp EECBSCCHHHHH---HT--------------CSHHHHHHHHHHTTCCHHHHHHHHTHHHHHHHTCTTSSCCSTTSBCCEE
T ss_pred EecCCCCCcchh---hh--------------cchHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCcCcCCCCCccEE
Confidence 999964211111 00 1134445555667999999999999999999999668999999999999
Q ss_pred EEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCcccC
Q 013050 388 VWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAP 440 (450)
Q Consensus 388 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~ 440 (450)
++|.-. + .+|..||++|++|+++|+++.
T Consensus 352 v~d~l~--------~-----------------~~v~~v~~~G~~v~~~g~~~~ 379 (608)
T 3nqb_A 352 VFEDLN--------G-----------------FSARHVLASGRAVAEGGRMLV 379 (608)
T ss_dssp EESCTT--------T-----------------CCEEEEEETTEEEEETTEECS
T ss_pred EECCCC--------C-----------------CcceEEEECCEEEEECCeEec
Confidence 999310 0 268999999999999999873
No 49
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=99.97 E-value=1.7e-31 Score=261.16 Aligned_cols=334 Identities=21% Similarity=0.249 Sum_probs=208.9
Q ss_pred cceeEEEeCCEEEEeccCCCCC---------CCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCC
Q 013050 2 CKRAVEIKEGNIISIVSEEDWP---------RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGG 72 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~---------~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~G 72 (450)
++++|+|+||||++|++..+.. ...++.++||++|++|+|||||+|+|+..++. .+.++++|
T Consensus 83 ~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~Pg~---------~~aAl~gG 153 (570)
T 4ubp_C 83 YKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINPDQ---------VDVALANG 153 (570)
T ss_dssp EEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCTTH---------HHHHHHTT
T ss_pred EEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEEcccCCCCcch---------HHHHHhcC
Confidence 4689999999999999864321 01246789999999999999999999977652 36789999
Q ss_pred ceEEEeCCC------CCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCcEEEEecccCCCC
Q 013050 73 ITTLIDMPL------NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIN 146 (450)
Q Consensus 73 vT~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 146 (450)
|||+++.+. +..+.......+....+... ...+++.+++... ....+.+.++.+.|+.+++.+..+
T Consensus 154 vTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~-~~~v~~~~~g~~~---~~~l~el~el~~aGa~gfK~~~~~---- 225 (570)
T 4ubp_C 154 ITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTE-GLPINVGILGKGH---GSSIAPIMEQIDAGAAGLKIHEDW---- 225 (570)
T ss_dssp EEEEEEECCSSCHHHHHSSCCCHHHHHHHHHHHHT-TCSSEEEEEEECC---CSSHHHHHHHHHHTCCEEEEEGGG----
T ss_pred CeEEEecCccccccCCCcCCCCcHHHHHHHHHHhh-hCCeeEEEEeccC---CcCHHHHHHHHHcCCCeEeeccCC----
Confidence 999995321 22334455556666655554 4578988887543 234678889999999999998644
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCC
Q 013050 147 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG 226 (450)
Q Consensus 147 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~ 226 (450)
..+.+.+.++++.|+++|+++.+|+++... ...+...++...
T Consensus 226 ---~~~~~~L~~aL~~A~~~g~~V~iHae~l~e-----------------------------~g~Vedalea~~------ 267 (570)
T 4ubp_C 226 ---GATPASIDRSLTVADEADVQVAIHSDTLNE-----------------------------AGFLEDTLRAIN------ 267 (570)
T ss_dssp ---CCCHHHHHHHHHHHHHHTCEEEEECCTTCS-----------------------------SCCHHHHHHHHT------
T ss_pred ---CCCHHHHHHHHHHHHHcCCEEEEEcCCcch-----------------------------hhHHHHHHHHhC------
Confidence 368899999999999999999999974321 001233333333
Q ss_pred CCCCceEEEEecCChh--HHHHHHHHHHhCCCcEEEec-CcchhcccccccCCC----CCceEEcCCC---------C-C
Q 013050 227 PAEGAHLHIVHLSDAS--SSLDLLMEAKTNGDSITVET-CPHYLAFSAEEIPDG----DTRFKCAPPI---------R-D 289 (450)
Q Consensus 227 ~~~~~~~~~~h~~~~~--~~~~~~~~~~~~g~~v~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~---------~-~ 289 (450)
+..+|..|..... ...+.++.+...+ +.... .|. .......+..+ -.+.+..+.+ + .
T Consensus 268 ---Gr~ih~~HiEgag~~hapd~i~~~~~~~--vlps~t~Pt-~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~~a~~Rir 341 (570)
T 4ubp_C 268 ---GRVIHSFHVEGAGGGHAPDIMAMAGHPN--VLPSSTNPT-RPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIR 341 (570)
T ss_dssp ---TCCEEETTTTSTTSSSTTTGGGGGGSTT--EEEBCCSTT-SSCBTTHHHHHHHHHHHHHTCCTTSHHHHHHHHHHSC
T ss_pred ---CCceeEEEecccccccChHHHHHhccCC--ccccccCCC-CCcccchhHHhhhheeeecccCccccchhHHHHhhhh
Confidence 5667766665320 1134444444433 33221 111 00000000000 0001111111 0 1
Q ss_pred hhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHH-H----------HhcCCCHHHH
Q 013050 290 AANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-G----------RKYGVTLEQL 358 (450)
Q Consensus 290 ~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~----------~~~gls~~~a 358 (450)
.....+...+++.|+.++++||+...... |.. ....+...... . .+.+++++++
T Consensus 342 ~~~i~a~~~L~d~G~~v~~gSD~p~~~~~--------------ge~-~~~~~~~a~~~~~~rg~l~~~~~~~~~~~~~ea 406 (570)
T 4ubp_C 342 PETIAAEDILHDLGIISMMSTDALAMGRA--------------GEM-VLRTWQTADKMKKQRGPLAEEKNGSDNFRLKRY 406 (570)
T ss_dssp HHHHHHHHHHHHTTSSCBCCCCBTTSSCT--------------TCH-HHHHHHHHHHHHHHHCSCTTCCSSCCHHHHHHH
T ss_pred hhccccccchhhcCCEEEEECcccccCCc--------------Ccc-cCcHHHHHHHHHHhcCCCCCccccccCCCHHHH
Confidence 11223345577789999999996432110 000 00000000000 0 1234789999
Q ss_pred HHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEec
Q 013050 359 ASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKE 435 (450)
Q Consensus 359 l~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~ 435 (450)
|+++|.|||+++|+ +++|+|++||.||||+||.++. . .+|..||++|++||+.
T Consensus 407 l~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~~-------------------~-----~~v~~t~~~G~~v~~~ 460 (570)
T 4ubp_C 407 VSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKFF-------------------G-----VKADRVIKGGIIAYAQ 460 (570)
T ss_dssp HHTTTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGGT-------------------T-----TSCSEEEETTEEEEEE
T ss_pred HHHHhHHHHHHhCCCCCCcccCCCCccCEEEECcccc-------------------c-----CCeeEEEECCEEEEec
Confidence 99999999999999 6789999999999999996531 0 1567999999999984
No 50
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=99.97 E-value=1.6e-30 Score=252.81 Aligned_cols=330 Identities=17% Similarity=0.142 Sum_probs=195.9
Q ss_pred ceeEEEeCCEEEEeccCCCCCCCCCCC--cEEecCCCEEeccceeeccccCCCCC-Cccc----ch-------HHHHHHH
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRNSKTG--QVVDYGEAVIMPGLIDVHAHLDDPGR-TEWE----GF-------PSGTKAA 68 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~~~~~--~viD~~g~~v~PG~iD~H~H~~~~~~-~~~~----~~-------~~~~~~~ 68 (450)
+++|+|+||||++|++.. .+ ++. ++||++|++|+|||||+|+|+..... ..|+ .. ....+.+
T Consensus 27 ~~~v~I~~g~I~~vg~~~-~~---~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (418)
T 2qs8_A 27 RISIVIDGNIISDIKKGF-IS---SNDFEDYIDLRDHTVLPGLMDMHVHFGQEYQSKAQAPIKVEREMQAILATQHAYVT 102 (418)
T ss_dssp EEEEEEETTEEEEEEESC-CC---CTTSSEEEEEEEEEEEECEEEEEECTTCCCCCTTTSCSCCCHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCEEEEEeCCC-CC---CCCcceEEECCCCEECCCeeeeeeccccCCCCCchhhhcCCHHHHHHHHHHHHHHH
Confidence 479999999999999754 11 356 89999999999999999999976531 1111 11 1256788
Q ss_pred HhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEec-------cccC----------C-------CccchH-
Q 013050 69 AAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG-------GLVP----------E-------NAYNAS- 123 (450)
Q Consensus 69 ~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~----------~-------~~~~~~- 123 (450)
+++|||++++++ ...+ ....+....+.. .....++...+ .... . .....+
T Consensus 103 l~~GvTtv~d~~-~~~~---~~~~~~~~~~~g-~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (418)
T 2qs8_A 103 FKSGFTTVRQVG-DSGL---VAISLRDAINSG-KLAGPRIFAAGKTIATTGGHADPTNGKAVDDYDYPVPEQGVVNGPYE 177 (418)
T ss_dssp HHTTEEEEEECC-CSSS---HHHHHHHHHHTT-SSCCCEEEECCSCBEETTCTTCTTTTCCGGGCCCCCGGGTEECSHHH
T ss_pred HHcCCCEEEeCC-CCcc---ccHHHHHHHHCC-CCCCCeEEecCccccccCCCccccccccccccccccccccccCCHHH
Confidence 999999999985 2211 111222221111 10111222111 0000 0 011122
Q ss_pred ---HHHHHHHcCCcEEEEecccC-----CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccc
Q 013050 124 ---ALEALLNAGVLGLKSFMCPS-----GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS 195 (450)
Q Consensus 124 ---~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 195 (450)
.+++..+.|...+|.+.... ...+.+..+.+.++++++.|+++|+++.+|+....
T Consensus 178 ~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~----------------- 240 (418)
T 2qs8_A 178 VYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAVHAHGAE----------------- 240 (418)
T ss_dssp HHHHHHHHHHHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHHHHHHHHTTCEEEEEECSHH-----------------
T ss_pred HHHHHHHHHHcCCCEEEEEecCCCCCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEECCHH-----------------
Confidence 33334556888888875321 11123567899999999999999999999995432
Q ss_pred cccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccC
Q 013050 196 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP 275 (450)
Q Consensus 196 ~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~ 275 (450)
.+..+++. +. ..+.|+.. -..+.++.+++.|+.+ +|....... +.
T Consensus 241 ---------------~i~~~~~~-----------g~-~~i~H~~~--~~~~~i~~l~~~gv~v----~p~~~~~~~--~~ 285 (418)
T 2qs8_A 241 ---------------GMKRAIKA-----------GV-DSIEHGTF--MDLEAMDLMIENGTYY----VPTISAGEF--VA 285 (418)
T ss_dssp ---------------HHHHHHHH-----------TC-SEEEECTT--CCHHHHHHHHHHTCEE----ECCHHHHHH--HH
T ss_pred ---------------HHHHHHHc-----------CC-CEEEECCC--CCHHHHHHHHHCCCEE----eeeechHHH--hh
Confidence 13333332 22 13456554 2234455555556532 232211100 00
Q ss_pred CCCCceEEcCCCCC-h-------hhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHH
Q 013050 276 DGDTRFKCAPPIRD-A-------ANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY 347 (450)
Q Consensus 276 ~~~~~~~~~~~~~~-~-------~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 347 (450)
..+ .....|+... . .....++.+++.|+.+++|||+. ..+... +...+..
T Consensus 286 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~-~~~~~~--------------------~~~e~~~ 343 (418)
T 2qs8_A 286 EKS-KIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGTDAG-VQKHGT--------------------NWKEFVY 343 (418)
T ss_dssp HHT-TSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTCCBCCCCCBT-TBCTTC--------------------TTHHHHH
T ss_pred hhc-cccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeCCCC-cCCcch--------------------HHHHHHH
Confidence 000 0011222221 1 12345678888999999999963 211100 0011223
Q ss_pred HHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEE
Q 013050 348 GRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATI 426 (450)
Q Consensus 348 ~~~~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 426 (450)
+.+.++|++++++++|.|||+++|+ +++|+|+|||.|||||+|.|+..++ ....+|+.||
T Consensus 344 ~~~~gls~~eal~~~T~n~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~-------------------~~~~~i~~v~ 404 (418)
T 2qs8_A 344 MVENGMPAMKAIQSATMETAKLLRIEDKLGSIESGKLADLIAVKGNPIEDI-------------------SVLENVDVVI 404 (418)
T ss_dssp HHHTTCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCG-------------------GGGGGEEEEE
T ss_pred HHHcCCCHHHHHHHHHHHHHHHhCCCCCCcccCCCCccCEEEECCChhhCH-------------------HHhcCccEEE
Confidence 4456999999999999999999999 6789999999999999998763211 1114789999
Q ss_pred ECCeEEEe
Q 013050 427 SRGNLVYK 434 (450)
Q Consensus 427 v~G~~v~~ 434 (450)
++|+++..
T Consensus 405 ~~G~~~~~ 412 (418)
T 2qs8_A 405 KDGLLYEG 412 (418)
T ss_dssp ETTEEEEC
T ss_pred ECCEEEec
Confidence 99998863
No 51
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=99.97 E-value=2e-31 Score=259.14 Aligned_cols=363 Identities=13% Similarity=0.098 Sum_probs=196.1
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCc---------c-------------c
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE---------W-------------E 59 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~---------~-------------~ 59 (450)
.+++|+| ||+|++|++..+.+..+++.+++|++|++|+|||||+|+|+....+.. | +
T Consensus 17 ~~~~v~i-~g~I~~Vg~~~~~~~~~~~~~vid~~g~~v~PGlId~H~H~~~~~~rg~~~~~~l~~wl~~~~~~~~~~~~~ 95 (427)
T 3v7p_A 17 QDKAVAF-DKKIEAIDTVENLIKKYPNAAVEHDENSLLLPGFANPHLHLEFSANKATLQYGDFIPWLYSVIRHREDLLPL 95 (427)
T ss_dssp ESCEEEE-SSBEEEEECHHHHHHHCTTSEEEEEEEEEEEECEEEEEECGGGTTCSSCSCCSSHHHHHHHHHHHHHHHHHH
T ss_pred eCcEEEE-CCEEEEecChhhhccccCCceEEeCCCCEEecCEeecccCcchhhcccccccCCHHHHHHHHHHhHHhcCHH
Confidence 4789999 999999998644321124678999999999999999999996443221 1 0
Q ss_pred c----hHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCcc----chHH----HHH
Q 013050 60 G----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAY----NASA----LEA 127 (450)
Q Consensus 60 ~----~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~ 127 (450)
. ......+++++|||++.++. ... .. +. .... ..++............. ..+. +..
T Consensus 96 ~~~~~~~~~~~e~l~~GvTtv~d~~-~~~---~~---~~----a~~~-~Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (427)
T 3v7p_A 96 CDGACLEQTLSSIIQTGTTAIGAIS-SYG---ED---LQ----ACID-SALKVVYFNEVIGSNAATADVMYASFLERFHQ 163 (427)
T ss_dssp SCHHHHHHHHHHHHHTTEEEEEEEE-SSS---TT---HH----HHHH-BSSEEEEEEEECBCCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEec-CcH---HH---HH----HHHh-cCCeEEEeccccCCChhhhhHHHHHHHHHHHH
Confidence 0 12234468899999999985 221 11 11 1111 12222222111111111 1111 112
Q ss_pred HHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCh-hhhhhhhhhccCcCCccccccccCCCChH
Q 013050 128 LLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME-KGSERHVKLEDDTLDTRSYSTYLKTRPPS 206 (450)
Q Consensus 128 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 206 (450)
........++....+ .....++++.++++++.|+++|+++.+|+.+. ..........+...+.. ...+....|.
T Consensus 164 ~~~~~~~~i~~~~~~---~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~~~~~~~~g~~~~~~-~~~~~~~~~~- 238 (427)
T 3v7p_A 164 SKKHENERFKAAVAI---HSPYSVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEFAKFF-KEFLNQTRPV- 238 (427)
T ss_dssp HHTTCBTTEEEEEEE---CCTTTBCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHSCSHHHHHH-HHHTCCCSCS-
T ss_pred hhhccCCceEEEEec---CCCCcCCHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHhcCcchhhh-hhhccCCCcc-
Confidence 111112222222222 12235788999999999999999999998443 32222221111000000 0000000010
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCC
Q 013050 207 WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPP 286 (450)
Q Consensus 207 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (450)
....+.... +.+.+..+.|+... +.+.++.+++.++ .+.+||........ ..++
T Consensus 239 ------~~~~~~l~~------~~~~~~~~~H~~~~--~~~~~~~l~~~g~--~~~~~p~s~~~~~~----------~~~~ 292 (427)
T 3v7p_A 239 ------NDTKSFLEL------FKELHTLFVHMVWA--NEEEIQTIASYNA--HIIHCPISNRLLGN----------GVLD 292 (427)
T ss_dssp ------SCHHHHHHT------TTTSEEEEEECTTC--CHHHHHHHHHSEE--EEEECHHHHHHTTC----------CCCC
T ss_pred ------cCHHHHHhh------hcCCCEEEEECCCC--CHHHHHHHHHcCC--EEEECHHHHHHhcC----------CCCC
Confidence 011121111 01556777887763 3345666666664 44447764432111 1122
Q ss_pred CCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhH-HHHHHHHHHhcCCCHHHHHHHHhhc
Q 013050 287 IRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFV-LPVTWSYGRKYGVTLEQLASWWSER 365 (450)
Q Consensus 287 ~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~gls~~~al~~aT~~ 365 (450)
++. + .|+.+++|||+.+.+....++ ... ...........+++++++++++|.|
T Consensus 293 ~~~----------~-~Gv~v~lgtD~~~~~~~~~~~---------------~~~~~a~~~~~~~~~~~~~~~~~~~~t~~ 346 (427)
T 3v7p_A 293 LEK----------I-KSIPYAIATDGLSSNYSLNMY---------------EELKAALFVHPNKEATTFAKELIIRATKA 346 (427)
T ss_dssp TTT----------T-TTSCEEECCCCTTSCSCCCHH---------------HHHHHHHHHSTTSCHHHHHHHHHHHHTHH
T ss_pred HHH----------H-CCCeEEEeCCCCCCCCCCCHH---------------HHHHHHHHhccCCCcccCHHHHHHHHHHH
Confidence 221 2 799999999965432211111 111 1111110111236679999999999
Q ss_pred hhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCcccCCCCCc
Q 013050 366 PAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHAPAACGS 445 (450)
Q Consensus 366 ~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~g~ 445 (450)
||+++|++ .|+|++|+.|||+|+|.+.++..+. +.|+......++|..|||+|++||++|+++....++
T Consensus 347 ~a~~~g~~-~g~l~~G~~Ad~~~~d~~~~~~~~~----------~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~ 415 (427)
T 3v7p_A 347 GYDALGFE-GGEIAVGKDADMQLIDLPEGLTNVE----------DLYLHVILHTTKPKKVYIQGEEHVREAENLYFQSHH 415 (427)
T ss_dssp HHHHHTCS-CSSCCTTSBCCEEEEECCTTCCCGG----------GHHHHHHHHCSSCSEEEETTEEEEC---CCCBC---
T ss_pred HHHHhCCC-CceeCCCCccCEEEEcCCCccCCCc----------cchHHHhcccCCccEEEECCEEEEECCcccCCcccc
Confidence 99999996 8999999999999999886544321 222211122357999999999999999999776554
No 52
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=99.97 E-value=1.8e-30 Score=255.41 Aligned_cols=347 Identities=17% Similarity=0.125 Sum_probs=190.7
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCC--------------CCcc---------
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG--------------RTEW--------- 58 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~--------------~~~~--------- 58 (450)
.+++|+|+||||++|++..+ .++||+.|++|+|||||+|+|+.... +..|
T Consensus 27 ~~~~v~I~~g~I~~Ig~~~~-------~~~iD~~g~~v~PGlID~H~H~~~~~~rg~~~~~~~~~~~~~~w~~~~~~~~~ 99 (458)
T 4f0l_A 27 ENVRIGIAGGVICSIETGVL-------AGPDDERQSVVVAGMANLHSHAFQYGMAGLAERRGPSADSFWSWREIMYKFAL 99 (458)
T ss_dssp EEEEEEEETTEEEEEECSCC-------CCTTCEEEEEEEECEEEEEECGGGGGGTTSSCBCCSCSSTTHHHHHHHHHHHH
T ss_pred cCceEEEECCEEEEEeCCCc-------cccccCCCCEEccCceecccchhhhhhcccccccccCCCcHHHHHHHhhhhhh
Confidence 46899999999999998643 34689999999999999999984221 1011
Q ss_pred ----cchH----HHHHHHHhCCceEEEeCCC-----CCCCCCCcHHHHHHHHHHHhc-CCceEE--EEec-----cccCC
Q 013050 59 ----EGFP----SGTKAAAAGGITTLIDMPL-----NSDPSTISTETLKLKVDAAEK-RIYVDV--GFWG-----GLVPE 117 (450)
Q Consensus 59 ----~~~~----~~~~~~~~~GvT~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~-----~~~~~ 117 (450)
+++. ....+++++|||++.++.. +..+.....+.+....+.... .....+ .+.. ...+.
T Consensus 100 ~~~~e~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~~~~~~~~~ 179 (458)
T 4f0l_A 100 TMTPEQAEAVALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAAATTAGMGLTLLPVFYAHSGFGGAAAN 179 (458)
T ss_dssp HCCHHHHHHHHHHHHHHHHHTTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCEEEEEEEECCEEETTTEECC
T ss_pred hCCHHHHHHHHHHHHHHHHhcCCcEEEeeeeeccccccccccchhhhHHHHHHHHHHcCCeEEEecchhccccccccCCc
Confidence 0111 1234678899999999631 011222222222222222221 111111 1110 01110
Q ss_pred --------C-ccchHHHHHHHH--cCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecC-Chhhhhhhhh
Q 013050 118 --------N-AYNASALEALLN--AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE-MEKGSERHVK 185 (450)
Q Consensus 118 --------~-~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~-~~~~~~~~~~ 185 (450)
+ ....+.+.++.+ .+...+.....+ ...+.++.+.++++++.|+ |+++.+|+. ....+.....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~a~--g~~v~~H~~e~~~~~~~~~~ 254 (458)
T 4f0l_A 180 EGQRRFINDPERFARLIEGCRKTLEGFEGAVLGVAP---HSLRAVTPDELDSVTQLLP--DAPVHIHVAEQVKEVEDCIA 254 (458)
T ss_dssp GGGTTTCCCHHHHHHHHHHHHHHHTTCTTCEECBEE---CBTTTSCHHHHHHHTTSST--TSCEEEEESCSHHHHHHHHH
T ss_pred hhhhhhhcCHHHHHHHHHHHHHHhccCCceEEEEec---CCcCcCCHHHHHHHHHHhc--CCCEEEEeCCCHHHHHHHHH
Confidence 0 011222233322 111111222211 1224578899999998888 999999995 3333222222
Q ss_pred hccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcc
Q 013050 186 LEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPH 265 (450)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~ 265 (450)
..+ . ..+..+.+... .+.+..+.|+... +.+.++.+++.++.+.. ||.
T Consensus 255 ~~g-------------~-------~~~~~l~~~g~--------l~~~~~~~H~~~~--~~~~~~~l~~~g~~~~~--~p~ 302 (458)
T 4f0l_A 255 WSG-------------K-------RPVEWLLDHQD--------VTARWCLIHATHM--SDEETKHMAKAGAIAGL--CPV 302 (458)
T ss_dssp HHS-------------S-------CHHHHHHHHSC--------CCTTEEEEECCSC--CHHHHHHHHHHTCEEEE--CHH
T ss_pred HhC-------------C-------CHHHHHHHcCC--------CCCCeEEEEeccC--CHHHHHHHHHcCCeEEE--Ccc
Confidence 111 0 01122222211 1445666777652 22345555555654443 665
Q ss_pred hhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhh-HHHHH
Q 013050 266 YLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQF-VLPVT 344 (450)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 344 (450)
....... ....+..+++.|+.+++|||..+.. ..... .....
T Consensus 303 s~~~l~~-------------------~~~~~~~~~~~Gv~v~lgtD~~~~~------------------~~~~~~~~~~~ 345 (458)
T 4f0l_A 303 TEANLGD-------------------GTFNATEFAAAGGKFGIGSDSNVLI------------------GIGDELRQLEY 345 (458)
T ss_dssp HHHHTTC-------------------CCCCHHHHHHTTCEEEECCBTTSSC------------------CHHHHHHHHHH
T ss_pred ccccccC-------------------CCccHHHHHHCCCeEEEECCCCCCC------------------CHHHHHHHHHH
Confidence 3321100 0112456678999999999953221 11111 11111
Q ss_pred HHHHHh---------cCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCC
Q 013050 345 WSYGRK---------YGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLG 415 (450)
Q Consensus 345 ~~~~~~---------~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (450)
...... .+++++++++++|.|||+++|+ +.|+|++||.|||||+|.+.++..+. ++++..
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~~A~~lg~-~~G~l~~G~~ADlvv~d~~~~~~~~~----------~~~~~~ 414 (458)
T 4f0l_A 346 SQRLYHRARNVLAANEGSTGRALFDGAVLGGNIAMGR-PEDGLKKGASADFVSLDVERLPHAKG----------DVVLDG 414 (458)
T ss_dssp HHHHHHTCSSCSCSTTSBHHHHHHHHHHHHHHHHTTC-TTCSSSTTSBCCEEEEECTTSTTCCH----------HHHHHH
T ss_pred HHhhhccCccccCCcccCCHHHHHHHHHHHHHHHhCC-CCCcCCCCCcCCEEEEeCCCCccCCc----------ccHHHh
Confidence 122211 2589999999999999999999 68999999999999999886443211 222221
Q ss_pred ceEe--eEEEEEEECCeEEEecCcccC
Q 013050 416 RRLS--GKVLATISRGNLVYKEGNHAP 440 (450)
Q Consensus 416 ~~~~--~~v~~v~v~G~~v~~~g~~~~ 440 (450)
..+. .+|..|||+|++||++|+++.
T Consensus 415 ~~~~~~~~v~~v~v~G~~v~~~g~~~d 441 (458)
T 4f0l_A 415 WIFAGRAHVCDVWVRGVKQVEGGRHRL 441 (458)
T ss_dssp HHHTSCCEEEEEEETTEEEEETTEETT
T ss_pred CeEcCCCCceEEEECCEEEEECCEeCC
Confidence 1110 189999999999999999863
No 53
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=99.97 E-value=5.1e-30 Score=249.46 Aligned_cols=325 Identities=20% Similarity=0.175 Sum_probs=183.6
Q ss_pred ceeEEEeCCEEEEeccCCCCCCC-CCCCcEEecCCCEEeccceeeccccCCCCCCc------------------------
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRN-SKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE------------------------ 57 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~-~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~------------------------ 57 (450)
.++|+|+||||++|++..+.+.. .+..++||++|++|+|||||+|+|+...+...
T Consensus 39 ~~~v~I~~g~I~~vg~~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~~~ 118 (419)
T 2puz_A 39 NAVIAVRNGRIAFAGPESDLPDDLSTADETTDCGGRWITPALIDCHTHLVFGGNRAMEFEMRLNGATYEEIAKAGGGIVS 118 (419)
T ss_dssp EEEEEEETTEEEEEEETTSCCGGGSCCSEEEECTTCEEEECEEECCCCCCCSSCCHHHHHHHHTTCCHHHHHHTTCSHHH
T ss_pred ceEEEEECCEEEEEcChhhhhhhccCCCeEEeCCCCEeCcCceecccCccchhhhHHHHHHHhcCCCHHHHHhcCCCeec
Confidence 57899999999999986543210 01358999999999999999999996543210
Q ss_pred ---------ccch----HHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEE--eccccCC-C---
Q 013050 58 ---------WEGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGF--WGGLVPE-N--- 118 (450)
Q Consensus 58 ---------~~~~----~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~--- 118 (450)
.+.+ ....+.++++|+|++.++. ................+.......+++.. .+..... .
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 197 (419)
T 2puz_A 119 SVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKS-GYGLDIETELKMLRVARRLETLRPVRIVTSYLAAHATPADYKG 197 (419)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEEC-CSCCSHHHHHHHHHHHHHHTTTSSCEEEEEECCTTCCCGGGTT
T ss_pred chhhhccCCHHHHHHHHHHHHHHHHhcCCeEEEeCC-CCCCCchhHHHHHHHHHHHhhhcCceEEEEecccccCchhhcc
Confidence 0001 1123678899999998853 11110001111122222222222333322 1111100 0
Q ss_pred --ccchH-----HHHHHHHcC-CcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCc
Q 013050 119 --AYNAS-----ALEALLNAG-VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDT 190 (450)
Q Consensus 119 --~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~ 190 (450)
....+ .+..+...+ ....+.+. +....+.+.+.++++.|+++|+++.+|+.....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~----------- 260 (419)
T 2puz_A 198 RNADYITDVVLPGLEKAHAEGLADAVDGFC------EGIAFSVKEIDRVFAAAQQRGLPVKLHAEQLSN----------- 260 (419)
T ss_dssp CHHHHHHHTHHHHHHHHHHTTCCSEECCEE------STTSBCHHHHHHHHHHHHHTTCCBEEEESSSSC-----------
T ss_pred cHHHHHHHHHhhhhhhhhhccccccccccc------CCCCcCHHHHHHHHHHHHHCCCcEEEEeccccc-----------
Confidence 00111 111222222 22222221 112457899999999999999999999943210
Q ss_pred CCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhccc
Q 013050 191 LDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFS 270 (450)
Q Consensus 191 ~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~ 270 (450)
...++. +.+. +. ..+.|+... ..+.++.+++.|+.+. .+|......
T Consensus 261 ------------------~~~~~~----~~~~-------g~-~~~~H~~~~--~~~~~~~~~~~g~~~~--~~p~~~~~l 306 (419)
T 2puz_A 261 ------------------LGGAEL----AASY-------NA-LSADHLEYL--DETGAKALAKAGTVAV--LLPGAFYAL 306 (419)
T ss_dssp ------------------CSHHHH----HHHT-------TC-SEEEECTTC--CHHHHHHHHHHTCEEE--ECHHHHHHH
T ss_pred ------------------CCHHHH----HHhc-------CC-ceehHhccC--CHHHHHHHHHcCCcEE--ECCchhhhh
Confidence 001111 1221 22 235666652 2345556666665443 366432211
Q ss_pred ccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCC-hhhhcccCCCccccCCCCcchhhHHHHHHH-HH
Q 013050 271 AEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTV-PELKLLDEGNFLKAWGGISSLQFVLPVTWS-YG 348 (450)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~ 348 (450)
. + ... ..+..+++.|+.+++|||+.+.. +.. . +...+. ..
T Consensus 307 ~------~---~~~---------~~~~~~~~~Gv~~~lgsD~~~~~~~~~-------------------~-l~~~~~~~~ 348 (419)
T 2puz_A 307 R------E---KQL---------PPVQALRDAGAEIALATDCNPGTSPLT-------------------S-LLLTMNMGA 348 (419)
T ss_dssp T------C---CCC---------CCHHHHHHHTCCEEECCCCCSSSCCBC-------------------C-HHHHHHHHH
T ss_pred c------c---ccc---------ccHHHHHHCCCeEEEECCCCCCCCccc-------------------c-HHHHHHHhc
Confidence 0 0 000 12345677899999999975431 100 1 122222 23
Q ss_pred HhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEE
Q 013050 349 RKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATIS 427 (450)
Q Consensus 349 ~~~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v 427 (450)
...++|++++++++|.|||+++|+ +++|+|+|||+|||||+|.++...+. .. ....+|..||+
T Consensus 349 ~~~~ls~~~al~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~~~~~~~~------~~----------~~~~~v~~v~v 412 (419)
T 2puz_A 349 TLFRMTVEECLTATTRNAAKALGLLAETGTLEAGKSADFAIWDIERPAELV------YR----------IGFNPLHARIF 412 (419)
T ss_dssp HHHCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEECCSSTTHHH------HC----------BSCCCEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHHHcCCCCCccccCCCCcCCEEEECCCchhcch------hh----------hcCCceEEEEE
Confidence 456899999999999999999999 66999999999999999987532211 10 00136999999
Q ss_pred CCeEEE
Q 013050 428 RGNLVY 433 (450)
Q Consensus 428 ~G~~v~ 433 (450)
+|++|.
T Consensus 413 ~G~~v~ 418 (419)
T 2puz_A 413 KGQKVS 418 (419)
T ss_dssp TTEECC
T ss_pred CCEEcC
Confidence 999874
No 54
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=99.97 E-value=2.8e-30 Score=253.23 Aligned_cols=347 Identities=16% Similarity=0.160 Sum_probs=194.5
Q ss_pred cceeEEE-eCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCC--------------cc--------
Q 013050 2 CKRAVEI-KEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT--------------EW-------- 58 (450)
Q Consensus 2 ~~~~V~I-~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~--------------~~-------- 58 (450)
.+++|.| +||+|++|++..+. ..++|++| +|+|||||+|+|+....+. .|
T Consensus 17 ~~~~v~i~~~g~I~~ig~~~~~------~~~~d~~g-~v~PGfId~H~H~~~~~~rg~~~~~~~~~~~l~~wl~~~~~~~ 89 (453)
T 3mdu_A 17 RNVRFEISADGVLAEIRPDANA------DGAERLGG-AVLPGMPNLHSHAFQRAMAGLAEVAGNPNDSFWTWRELMYRMV 89 (453)
T ss_dssp EEEEEEECTTSBEEEEESSCCC------TTSEECSS-CEEECEEEEEECGGGGGGTTTTCCCSSTTCCHHHHHHHHHHHH
T ss_pred cCeEEEEecCCEEEEecCCCCc------ccccccCC-cccccceecccchHHHhhccccccccCCCCcHHHHHHHHhhhh
Confidence 4689999 89999999986542 24579999 9999999999998422111 01
Q ss_pred -----cchHH----HHHHHHhCCceEEEeCCCC-----CCCCCCcHHHHHHHHHHHhcCCceEEEEecc------c---c
Q 013050 59 -----EGFPS----GTKAAAAGGITTLIDMPLN-----SDPSTISTETLKLKVDAAEKRIYVDVGFWGG------L---V 115 (450)
Q Consensus 59 -----~~~~~----~~~~~~~~GvT~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~ 115 (450)
+++.. ...+++++|||++.++.+. ..+.....+......+..... .++...... . .
T Consensus 90 ~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~-Gir~~~~~~~~~~~~~~~~~ 168 (453)
T 3mdu_A 90 ARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAA-GIGLTLLPVLYSHAGFGGQP 168 (453)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHH-TCEEEEEECBCCBSSTTTCB
T ss_pred hhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccccccchhhHHHHHHHHHHHh-CCeEEEecchhccccccCCC
Confidence 11111 2335889999999986310 111112222222333332221 222221100 0 0
Q ss_pred CC--------C-ccchHHHHHHHH----cCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEec-CChhhhh
Q 013050 116 PE--------N-AYNASALEALLN----AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKGSE 181 (450)
Q Consensus 116 ~~--------~-~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~~~ 181 (450)
+. + ....+.+.++.+ .+. .+. +++ +....++.+.++++++.|+ +|+++.+|+ +....+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~p---~~~~~~~~e~l~~~~~~A~-~g~~v~~H~~e~~~e~~ 241 (453)
T 3mdu_A 169 ASEGQRRFINGSEAYLELLQRLRAPLEAAGH-SLG--LCF---HSLRAVTPQQIATVLAAGH-DDLPVHIHIAEQQKEVD 241 (453)
T ss_dssp CCGGGGGGCCCHHHHHHHHHHHHHHHHHHTC-EEC--EEE---EETTTSCHHHHHHHHTSSC-TTSCEEEEESCSHHHHH
T ss_pred CchhhhhccCCHHHHHHHHHHHHHHhhcCCC-eEE--Eec---CCCCcCCHHHHHHHHHHHh-cCCCEEEEeCCCHHHHH
Confidence 00 0 011222223222 122 211 111 1113578999999999999 999999997 4443333
Q ss_pred hhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEe
Q 013050 182 RHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVE 261 (450)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~ 261 (450)
..+...+ ...++.+.+... .+.+..+.|+... +.+.++.+++.|+.+..
T Consensus 242 ~~~~~~g--------------------~~~v~~l~~~g~--------~~~~~~~~H~~~~--~~~~i~~la~~g~~v~~- 290 (453)
T 3mdu_A 242 DCQAWSG--------------------RRPLQWLYENVA--------VDQRWCLVHATHA--DPAEVAAMARSGAVAGL- 290 (453)
T ss_dssp HHHHHHS--------------------SCHHHHHHHHSC--------CCTTEEEEECCSC--CHHHHHHHHHHTCEEEE-
T ss_pred HHHHHhC--------------------CCHHHHHHHcCC--------CCCCeEEEEcCCC--CHHHHHHHHHcCCEEEE-
Confidence 3332211 001222222211 1456677777652 23445666666654444
Q ss_pred cCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHH
Q 013050 262 TCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVL 341 (450)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 341 (450)
||........ ....+..+++.|+.+++|||......... +...
T Consensus 291 -~P~sn~~lg~-------------------g~~p~~~~~~~Gv~v~lgtD~~~~~~~~~-----------------~~~~ 333 (453)
T 3mdu_A 291 -CLSTEANLGD-------------------GIFPATDFLAQGGRLGIGSDSHVSLSVVE-----------------ELRW 333 (453)
T ss_dssp -CHHHHHHTTC-------------------CCCCHHHHHHTTCEEEECCBTCSCCCHHH-----------------HHHH
T ss_pred -CchhHhhcCC-------------------CCCCHHHHHHCCCEEEEECCCCCCCCHHH-----------------HHHH
Confidence 7753321110 01124566789999999999532211110 0111
Q ss_pred HHHHHHHH----------hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCcc
Q 013050 342 PVTWSYGR----------KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSIS 411 (450)
Q Consensus 342 ~~~~~~~~----------~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~ 411 (450)
........ +.+++++++++++|.|||+++|+ +.|+|++|+.|||+|+|.+.++... ... ++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~~~-~~G~l~~G~~AD~~~~d~~~~~~~~-------~~~-~~ 404 (453)
T 3mdu_A 334 LEYGQRLRDRKRNRLYRDDQPMIGRTLYDAALAGGAQALGQ-PIGSLAVGRRADLLVLDGNDPYLAS-------AEG-DA 404 (453)
T ss_dssp HHHHHHHHHTCSCCSCBTTBCCHHHHHHHHHHHHHHHHHTS-SCSSCCTTSBCCEEEECTTCHHHHT-------CCH-HH
T ss_pred HHHHHhhhccCCccccCcccCCCHHHHHHHHHHHHHHHhCC-CCCccCCCCcCCEEEEeCCCccccC-------CCc-cC
Confidence 11111111 12799999999999999999999 7999999999999999987543221 011 23
Q ss_pred ccCCceE---eeEEEEEEECCeEEEecCcccC
Q 013050 412 AYLGRRL---SGKVLATISRGNLVYKEGNHAP 440 (450)
Q Consensus 412 ~~~~~~~---~~~v~~v~v~G~~v~~~g~~~~ 440 (450)
|+...++ ..+|..|||+|++||++|+++.
T Consensus 405 ~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~ 436 (453)
T 3mdu_A 405 LLNRWLFAGGDRQVRDVMVAGRWVVRDGRHAG 436 (453)
T ss_dssp HHHHHHHHCCGGGEEEEEETTEEEEBTTBCTT
T ss_pred hHHHheeeCCCCCeeEEEECCEEEEECCccCC
Confidence 3322222 1479999999999999999874
No 55
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=99.97 E-value=4.6e-30 Score=247.79 Aligned_cols=333 Identities=18% Similarity=0.170 Sum_probs=176.6
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecC-CCEEeccceeeccccCCC---CCCcccchHHHHHHHHhCCceEEE
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYG-EAVIMPGLIDVHAHLDDP---GRTEWEGFPSGTKAAAAGGITTLI 77 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~-g~~v~PG~iD~H~H~~~~---~~~~~~~~~~~~~~~~~~GvT~~~ 77 (450)
.+++|+|+||+|++|++..+.. ++.++||++ |++|+|||||+|+|+..+ .....+++....+.++++|||+++
T Consensus 20 ~~~~v~I~~g~I~~ig~~~~~~---~~~~viD~~~g~~v~PGlID~H~H~~~~~~~~~~~~e~~~~~~~~~l~~GvTtv~ 96 (396)
T 2vhl_A 20 KNGYVGINDGKISTVSTERPKE---PYSKEIQAPADSVLLPGMIDIHIHGGYGADTMDASFSTLDIMSSRLPEEGTTSFL 96 (396)
T ss_dssp EEEEEEEETTEEEEEESSCCSS---CCSEEEECCTTCEEEECEEEEEECEETTEEGGGCSHHHHHHHHHHGGGGTEEEEE
T ss_pred cCceEEEECCEEEEEECCCCCC---CCCceEcCCCCCEEcCCEEEEeecCCcCccccCCCHHHHHHHHHHHHcCCeeEEE
Confidence 3589999999999998321111 245899999 999999999999999764 223345566778899999999999
Q ss_pred eCCCCCCCCCCcHHHHHHHHHHHhc-C----CceEEEE--eccccCC-----------CccchHHHHHHHHcCCcEEEEe
Q 013050 78 DMPLNSDPSTISTETLKLKVDAAEK-R----IYVDVGF--WGGLVPE-----------NAYNASALEALLNAGVLGLKSF 139 (450)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~--~~~~~~~-----------~~~~~~~~~~~~~~g~~~~~~~ 139 (450)
+++ ++.+.......+....+.... . ....++. .+..... .....+.++++.+.+...++.+
T Consensus 97 d~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ik~~ 175 (396)
T 2vhl_A 97 ATT-ITQEHGNISQALVNAREWKAAEESSLLGAELLGIHLEGPFVSPKRAGAQPKEWIRPSDVELFKKWQQEAGGLIKIV 175 (396)
T ss_dssp EEC-CSCCHHHHHHHHHHHHHHHHHCSGGGSSSEEEEEEEECSSSCGGGCTTSCGGGCCCCCHHHHHHHHHHTTTCEEEE
T ss_pred ecc-cCCCHHHHHHHHHHHHHHHhcccccccccceEEEeeecCccCccccCCCCHHHccCCCHHHHHHHHHhcCCcceEE
Confidence 996 332221111123333333322 2 1212222 2211110 0113456777777655444432
Q ss_pred cccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEE-ecC-ChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHH
Q 013050 140 MCPSGINDFPMTNASHIKEGLSVLARYKRPLLV-HAE-MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLT 217 (450)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~-H~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 217 (450)
...+ ... ...+.++.|+++|+++.. |+. ....+...+..
T Consensus 176 ~~~p------~~~--~~~~~~~~a~~~g~~v~~gH~~~~~~~~~~a~~~------------------------------- 216 (396)
T 2vhl_A 176 TLAP------EED--QHFELIRHLKDESIIASMGHTDADSALLSDAAKA------------------------------- 216 (396)
T ss_dssp EECG------GGS--GGGHHHHHHHHTTCEEEECSBCCCHHHHHHHHHT-------------------------------
T ss_pred EECC------CCC--CHHHHHHHHHHCCCEEeecccCCCHHHHHHHHHc-------------------------------
Confidence 2111 111 112567888999999988 985 33332222221
Q ss_pred HHHhhccCCCCCCceEEEEecCChhHHH-----HHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhh
Q 013050 218 VAKDTRTDGPAEGAHLHIVHLSDASSSL-----DLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAAN 292 (450)
Q Consensus 218 l~~~~~~~~~~~~~~~~~~h~~~~~~~~-----~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (450)
|.+ ++.|++...... ..+..... ...++++.++++..++. ..
T Consensus 217 ------------G~~-~i~H~~~~~~~~~~~~~G~~~~~~~-~~~~~~e~~~h~~~l~~-------------------~~ 263 (396)
T 2vhl_A 217 ------------GAS-HMTHLYNAMSPFHHREPGVIGTALA-HDGFVTELIADGIHSHP-------------------LA 263 (396)
T ss_dssp ------------TCC-EESSTTSSBCCCCSSSCHHHHHHHH-CTTCEEEEECSSSSSCH-------------------HH
T ss_pred ------------CCC-EeEeCCccCcccccCCCCchhhhhc-CCCcEEEEcCCccccCH-------------------HH
Confidence 222 333332210000 00000000 00112222222211110 00
Q ss_pred HHHHHHHHhcCC-eeEEcCCCCCC---C-------hhhhcccCCCccccCCCCcchhhHHHHHHHHHHh-cCCCHHHHHH
Q 013050 293 KEKLWEALMDGH-IDMLSSDHSPT---V-------PELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK-YGVTLEQLAS 360 (450)
Q Consensus 293 ~~~l~~~~~~g~-~~~~gtD~~~~---~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~gls~~~al~ 360 (450)
...+.+.. +. .+.+.+|.... . +...+...|.+....++..+....+...+..+.+ .++|++++++
T Consensus 264 ~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~d~~~~g~~~~l~~~l~~~~~~~~~~~~~~l~ 341 (396)
T 2vhl_A 264 AKLAFLAK--GSSKLILITDSMRAKGLKDGVYEFGGQSVTVRGRTALLSDGTLAGSILKMNEGARHMREFTNCSWTDIAN 341 (396)
T ss_dssp HHHHHHHH--CTTSEEEECCBCTTTTSCSEEEEETTEEEEEETTEEECTTSCBCSBCCCHHHHHHHHHHHHCCCHHHHHH
T ss_pred HHHHHhhc--CCccEEEECcChhhcCCCCceEEECCeEEEEECCEEEeCCCcccccccCHHHHHHHHHHhcCCCHHHHHH
Confidence 00000000 11 11111121000 0 0000111111111122333444445555555444 6899999999
Q ss_pred HHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCccc
Q 013050 361 WWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHA 439 (450)
Q Consensus 361 ~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 439 (450)
++|.|||++||+ ++.|+|++|++|||||+|.+ .+|..||++|++||+++++-
T Consensus 342 ~aT~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~---------------------------~~v~~v~~~G~~v~~~~~~~ 394 (396)
T 2vhl_A 342 ITSENAAKQLGIFDRKGSVTVGKDADLVIVSSD---------------------------CEVILTICRGNIAFISKEAD 394 (396)
T ss_dssp HHTHHHHHHHTCTTTSSSCCTTSBCCEEEECTT---------------------------CCEEEEEETTEEEEECSCCC
T ss_pred HHHHHHHHHhCCcCCCceeCCCCcCCEEEECCC---------------------------CcEEEEEECCEEEEeccccc
Confidence 999999999999 56999999999999999965 27899999999999999864
No 56
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=99.97 E-value=3.2e-28 Score=234.65 Aligned_cols=325 Identities=21% Similarity=0.226 Sum_probs=193.8
Q ss_pred eeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcc--------------------cc---
Q 013050 4 RAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW--------------------EG--- 60 (450)
Q Consensus 4 ~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~--------------------~~--- 60 (450)
++|+|+||+|++|++..+ + .+.++||++|++|+|||||+|+|+........ +.
T Consensus 24 ~~v~i~~g~I~~i~~~~~-~---~~~~~id~~g~~~~Pg~~d~h~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (396)
T 3ooq_A 24 GDVLVSNGKVEKVGENIE-D---PDAEIVDLTGKFLFPGFVDAHSHIGLFEEGVGYYYSDGNEATDPVTPHVKALDGFNP 99 (396)
T ss_dssp EEEEEETTEEEEEESCCC-C---TTSEEEECTTCEEEECEEEEEECTTTSCTTSCGGGCCSCCTTCSBCTTCBGGGGCCT
T ss_pred eEEEEECCEEEEecCCCC-C---CCCeEEECCCCEEecCEEecccccCccccCccccccccccccCccCccccHhhhcCc
Confidence 789999999999998654 2 47889999999999999999999975321100 00
Q ss_pred hHHHHHHHHhCCceEEEeCCCCCCCCCCcHH-----HHHHHHHHHhcCCceEEEEecccc-----------CCCc-cchH
Q 013050 61 FPSGTKAAAAGGITTLIDMPLNSDPSTISTE-----TLKLKVDAAEKRIYVDVGFWGGLV-----------PENA-YNAS 123 (450)
Q Consensus 61 ~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-~~~~ 123 (450)
......+++++|||++++++ ++.+...... ........... ....+....+.. +... ...+
T Consensus 100 ~~~~~~~~~~~GvTtv~~~~-gs~~~i~G~~~~~~~~~~~~~~~~~~-~~~~i~~~~g~~~~~~~~~~~~~p~~~~~~~~ 177 (396)
T 3ooq_A 100 QDPAIERALAGGVTSVMIVP-GSANPVGGQGSVIKFRSIIVEECIVK-DPAGLKMAFGENPKRVYGERKQTPSTRMGTAG 177 (396)
T ss_dssp TCHHHHHHHTTTEEEEEECC-CSSSSEEEEEEEEESCCSSHHHHEEE-EEEEEEEECSHHHHHHHHHTTCSCSSHHHHHH
T ss_pred CcHHHHHHHhCCeEEEeccC-CCCCcccCeeEEEeccCCCHHHceec-CCcEEEEEcCCCCcccccccCCCCccHHHHHH
Confidence 11467889999999999996 3321110000 00001111111 111111111110 0000 1123
Q ss_pred HHHHHHHcCCcEEEE---ecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCcccccccc
Q 013050 124 ALEALLNAGVLGLKS---FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYL 200 (450)
Q Consensus 124 ~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (450)
.+++..+.+...... .....+ +....+...+.+..+.+.++++.+|++...
T Consensus 178 ~l~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~e~l~~~~~~~~~v~iHa~~~~---------------------- 231 (396)
T 3ooq_A 178 VIRDYFTKVKNYMKKKELAQKEGK----EFTETDLKMEVGEMVLRKKIPARMHAHRAD---------------------- 231 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC----CCCCCCHHHHHHHHHHTTSSCEEEEECSHH----------------------
T ss_pred HHHHHHHHHHHHHHhhhhhhhccC----CCCCcChhHHHHHHHHcCCCcEEEEECchh----------------------
Confidence 333333211100000 000001 012223444555556689999999996543
Q ss_pred CCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCc
Q 013050 201 KTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTR 280 (450)
Q Consensus 201 ~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 280 (450)
.+..+++++++. +.++.+.|+..... .++.+++.|+.+.. +|.+.+....
T Consensus 232 ----------~i~~~~~~~~~~-------g~~~~i~H~~~~~~---~~~~l~~~gv~v~~--~P~~~~~~~~-------- 281 (396)
T 3ooq_A 232 ----------DILTAIRIAEEF-------GFNLVIEHGTEAYK---ISKVLAEKKIPVVV--GPLLTFRTKL-------- 281 (396)
T ss_dssp ----------HHHHHHHHHHHH-------TCCEEEEECTTGGG---GHHHHHHHTCCEEE--CCCSSCCCSG--------
T ss_pred ----------HHHHHHHHHHHc-------CCCEEEecCchHHH---HHHHHHHCCCCEEE--Ccccccccch--------
Confidence 245677777766 77888999987522 36667777876665 5532211100
Q ss_pred eEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHHHHH
Q 013050 281 FKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLAS 360 (450)
Q Consensus 281 ~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~al~ 360 (450)
.++ ......+..+++.|+.++++||+.... .. .+......+.+.+++++++++
T Consensus 282 -----~~~-~~~~~~~~~l~~~Gv~v~lgtD~~~~~-~~--------------------~l~~~~~~~~~~gl~~~~al~ 334 (396)
T 3ooq_A 282 -----ELK-DLTMETIAKLLKDGVLIALMCDHPVIP-LE--------------------FATVQAATAMRYGAKEEDLLK 334 (396)
T ss_dssp -----GGT-TCCTTHHHHHHHTTCCEEECCTTTTSC-GG--------------------GHHHHHHHGGGGTCCHHHHHH
T ss_pred -----hHH-hhhhHHHHHHHHCCCEEEEEcCCCccC-cc--------------------HHHHHHHHHHHcCCCHHHHHH
Confidence 000 011234567788999999999963221 11 122333445677999999999
Q ss_pred HHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEecCccc
Q 013050 361 WWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKEGNHA 439 (450)
Q Consensus 361 ~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 439 (450)
++|.|||+++|+ +++|+|++||.|||||+|.|+.. . ..+|..||++|++||+..+-.
T Consensus 335 ~~T~n~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~---------~-------------~~~v~~v~~~G~~v~~~~~~~ 392 (396)
T 3ooq_A 335 ILTVNPAKILGLEDRIGSIEPGKDADLVVWSGHPFD---------M-------------KSVVERVYIDGVEVFRREGHH 392 (396)
T ss_dssp TTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTS---------T-------------TCCEEEEEETTEEEEECC---
T ss_pred HHHHHHHHHhCCCCCeeeECCCCcCCEEEECCCccc---------c-------------ccceeEEEECCEEEeCCCCcc
Confidence 999999999999 66899999999999999976411 0 037899999999999976543
No 57
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=99.96 E-value=6e-29 Score=238.72 Aligned_cols=337 Identities=16% Similarity=0.126 Sum_probs=180.2
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCC-CC------cccchHHHHHHHHhCCce
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG-RT------EWEGFPSGTKAAAAGGIT 74 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~-~~------~~~~~~~~~~~~~~~GvT 74 (450)
.+++|+|+||+|++|++..+.+ .+.++||++|++|+|||||+|+|+.... +. ..+.+....++++++|||
T Consensus 17 ~~~~v~I~~g~I~~vg~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~g~~~~~~~~~~~~~~~~~~~~~~l~~GvT 93 (382)
T 1yrr_A 17 DDHAVVIADGLIKSVCPVAELP---PEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCT 93 (382)
T ss_dssp SSEEEEEETTEEEEEEEGGGSC---TTCCEEECTTCEEEECEEEEEESEETTEESSSSTTTSSHHHHHHHHHHHHHTTEE
T ss_pred eCCEEEEECCEEEEEecCCCCC---ccceeecCCCCEEccCEEEEeecccCCcCccccccCCCHHHHHHHHHHHHhCCeE
Confidence 4689999999999999764322 2568999999999999999999985321 11 113344567899999999
Q ss_pred EEEeCCCCCCCCCCcHHHHHHHHHHHh--cCCceEEEEecccc-CC-----Ccc-----chHHHHHHHHcCCcEEEEecc
Q 013050 75 TLIDMPLNSDPSTISTETLKLKVDAAE--KRIYVDVGFWGGLV-PE-----NAY-----NASALEALLNAGVLGLKSFMC 141 (450)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~-----~~~-----~~~~~~~~~~~g~~~~~~~~~ 141 (450)
+++++. ...+.......+....+... ..........+... .. ... ..+.++ +.+.+...++.+.
T Consensus 94 tv~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ik~~~- 170 (382)
T 1yrr_A 94 NYLPTL-ITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVD-FLCENADVITKVT- 170 (382)
T ss_dssp EEEEEE-ECCCHHHHHHHHHHHHHHHHHCTTSBCCEEEECSSCCCSCC-CCCSCSCCHHHHHHHH-HHHHTTTTEEEEE-
T ss_pred EEEeec-CCCCHHHHHHHHHHHHHHhhccCCceeEEEEeCCcCCccccCCCCHHHccCCCHHHHH-HHHhcCCCEEEEE-
Confidence 999975 33221111112222222222 11122222222111 10 111 124455 6666665565532
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHhcCCcEEE-ecC-ChhhhhhhhhhccCcCCcccccc--ccCCCChHHHHHHHHHHHH
Q 013050 142 PSGINDFPMTNASHIKEGLSVLARYKRPLLV-HAE-MEKGSERHVKLEDDTLDTRSYST--YLKTRPPSWEEAAIRELLT 217 (450)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~-H~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~ 217 (450)
....+.+.++++.|+++|+++.+ |+. ....+...+..+.....+..... .....+. .+...
T Consensus 171 --------~~~~~~~~~~~~~a~~~g~~v~~gH~~~~~~~~~~~~~~G~~~~~h~~~~~~~~~~~~~g-----~~~~~-- 235 (382)
T 1yrr_A 171 --------LAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPG-----LAGAI-- 235 (382)
T ss_dssp --------ECGGGSCHHHHHHHHHTTCEEEECSCCCCHHHHHHHHHHTCCEESSTTTTSCCBCSSCCH-----HHHHH--
T ss_pred --------ECCCCChHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHcCCCeeEECCCCCCccccCCcc-----hhhHh--
Confidence 01114445788999999999998 996 45555544443221111110000 0001111 11111
Q ss_pred HHHhhccCCCCCCce-EEEEecCCh-hHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHH
Q 013050 218 VAKDTRTDGPAEGAH-LHIVHLSDA-SSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEK 295 (450)
Q Consensus 218 l~~~~~~~~~~~~~~-~~~~h~~~~-~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (450)
.... +.. ..+.|+... ++.++.+.+.+ ...+.. ++......+ ... ..+... .
T Consensus 236 -l~~~-------~~~~~~~~h~~~~~~~~~~~~~~~~--~~~~~~--~~d~~~~~g---~~~-~~~~~~----------~ 289 (382)
T 1yrr_A 236 -LDEA-------DIYCGIIADGLHVDYANIRNAKRLK--GDKLCL--VTDATAPAG---ANI-EQFIFA----------G 289 (382)
T ss_dssp -HHCT-------TCEEEEECSSSSSCHHHHHHHHHHH--GGGEEE--ECCBCTTTT---SCC-SEEEET----------T
T ss_pred -hcCC-------cceeeecCcccccCHHHHHHHHHcC--CCcEEE--ECcChHhcC---CCC-ceEEEC----------C
Confidence 1100 111 133444321 15555555543 012222 221110000 000 011110 0
Q ss_pred HHHHHhcCCee-EEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHH-hcCCCHHHHHHHHhhchhHHhCC-
Q 013050 296 LWEALMDGHID-MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLASWWSERPAKLAGQ- 372 (450)
Q Consensus 296 l~~~~~~g~~~-~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~gls~~~al~~aT~~~A~~lg~- 372 (450)
+..+++.|+.+ ..|||..+ ...+...+..+. ..++|++++++++|.|||++||+
T Consensus 290 ~~~~~~~Gv~~~~~Gt~~g~-----------------------~~~~~~~~~~~~~~~g~~~~~al~~aT~~~A~~lg~~ 346 (382)
T 1yrr_A 290 KTIYYRNGLCVDENGTLSGS-----------------------SLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVE 346 (382)
T ss_dssp EEEEECSSCEECTTCCEEEB-----------------------CCCHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCT
T ss_pred EEEEEECCEEEeCCCcCcCC-----------------------ccCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhCCC
Confidence 11224556554 12333110 011222233333 57999999999999999999999
Q ss_pred CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEec
Q 013050 373 VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYKE 435 (450)
Q Consensus 373 ~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~ 435 (450)
+++|+|+|||+|||||+|.++ +|..||++|++||++
T Consensus 347 ~~~G~i~~G~~ADlvvld~~~---------------------------~v~~v~~~G~~v~~~ 382 (382)
T 1yrr_A 347 KRLGTLAAGKVANLTAFTPDF---------------------------KITKTIVNGNEVVTQ 382 (382)
T ss_dssp TTSSSCCTTSBCCEEEECTTS---------------------------CEEEEEETTEEEEEC
T ss_pred CCCCccCCCCCCCEEEECCCC---------------------------CEEEEEECCEEEEeC
Confidence 669999999999999999663 689999999999975
No 58
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=99.96 E-value=7.5e-28 Score=230.71 Aligned_cols=339 Identities=18% Similarity=0.124 Sum_probs=176.6
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCCcccc-------h-----HHHHHHHH
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEG-------F-----PSGTKAAA 69 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~-------~-----~~~~~~~~ 69 (450)
.+++|+|+||||++|++..+... ++.++||++|++|+|||||+|+|+.......... + .......+
T Consensus 21 ~~~~V~I~dG~I~~Ig~~~~~~~--~~~~vID~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (403)
T 3mtw_A 21 DNPLVIVTDGRITSIGKKGDAVP--AGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSLEYSDRFWSVVQTANAKKTL 98 (403)
T ss_dssp ESEEEEEETTEEEEEEETTCCCC--TTCEEEEEEEEEEEECEEEEEECTTCCTTCCGGGGGGSCHHHHHHHHHHHHHHHH
T ss_pred cCcEEEEECCEEEEEeCCCCCCC--CCCEEEECCCCEEEeChheeeeCCccccccCccccccccHHHHhhhhhhhhhhcc
Confidence 46899999999999998765322 4789999999999999999999997654332111 1 11233556
Q ss_pred hCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEecc-------ccCC-------------Ccc----chHHH
Q 013050 70 AGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG-------LVPE-------------NAY----NASAL 125 (450)
Q Consensus 70 ~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-------------~~~----~~~~~ 125 (450)
..++++..+.. ... .......... ............... .... ... .....
T Consensus 99 ~~~~~~~~~~~-~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (403)
T 3mtw_A 99 EAGFTTVRNVG-AAD---YDDVGLREAI-DAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMDQKNPFNSDSPDEARKAV 173 (403)
T ss_dssp HTTEEEEEECC-CST---THHHHHHHHH-HTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGCCCCTTCCCSHHHHHHHH
T ss_pred ccccceeeccc-ccc---ccchhhhhhh-hccccccccccccccccccccccccccccccccccccccccchhHHHhhhh
Confidence 78999998875 211 1111111111 111111111111100 0000 000 12223
Q ss_pred HHHHHcCCcEEEEeccc-----CCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCcccccccc
Q 013050 126 EALLNAGVLGLKSFMCP-----SGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYL 200 (450)
Q Consensus 126 ~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (450)
......+.......... ...........+.+.++++.|++.+.++..|..........+....... ...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 247 (403)
T 3mtw_A 174 RTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGIREAVRAGVDTI------EHA 247 (403)
T ss_dssp HHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCSEE------EEC
T ss_pred HhhhhhcchhhhhhhccccccccccccccccCHHHHHHHHHHHHHcCCeEEEEeccchhHHHHHHhccccc------ccc
Confidence 34444555555443211 1112234567788999999999999999999965443222221110000 000
Q ss_pred CCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCc
Q 013050 201 KTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTR 280 (450)
Q Consensus 201 ~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 280 (450)
..... ......... . ....+... ............+.. ...+....
T Consensus 248 ~~~~~-------~~~~~~~~~--------~--~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~------------- 293 (403)
T 3mtw_A 248 SLVDD-------EGIKLAVQK--------G--AYFSMDIY--NTDYTQAEGKKNGVL--EDNLRKDR------------- 293 (403)
T ss_dssp TTCCH-------HHHHHHHHH--------T--CEEECCCS--THHHHHHHHHHHTCC--HHHHHHHH-------------
T ss_pred ccccc-------chhhhhccc--------c--ceeeeeec--cchhhhhhhhccccc--hhhccccc-------------
Confidence 00000 000000000 0 00011111 111111111111100 00000000
Q ss_pred eEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHHHHH
Q 013050 281 FKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLAS 360 (450)
Q Consensus 281 ~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~al~ 360 (450)
.............++.|....+|||........ +...+..+.+.|+|++++|+
T Consensus 294 ------~~~~~~~~~~~~~~~~g~~~~~gt~~~~~~~~~---------------------~~~~~~~~~~~gls~~eal~ 346 (403)
T 3mtw_A 294 ------DIGELQRENFRKALKAGVKMVYGTDAGIYPHGD---------------------NAKQFAVMVRYGATPLQAIQ 346 (403)
T ss_dssp ------HHHHHHHHHHHHHHHHTCEEECCCCBTTBCTTC---------------------GGGHHHHHHHTTCCHHHHHH
T ss_pred ------cccccccchhhHHHhcCCeEeeccCCcccccch---------------------HHHHHHHHHHcCCCHHHHHH
Confidence 000112233455667899999999964332111 11122345678999999999
Q ss_pred HHhhchhHHhCC-CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEE
Q 013050 361 WWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVY 433 (450)
Q Consensus 361 ~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~ 433 (450)
++|.|||++||+ +++|+|++||+|||||||.||..++ ....+|++||++||+|.
T Consensus 347 ~~T~npA~~lgl~~~~GsI~~G~~ADlvvld~dPl~di-------------------~~~~~v~~Vi~~G~vvk 401 (403)
T 3mtw_A 347 SATLTAAEALGRSKDVGQVAVGRYGDMIAVAGDPLADV-------------------TTLEKPVFVMKGGAVVK 401 (403)
T ss_dssp HTTHHHHHHHTCTTTSSSCCTTSBCCEEEESSCTTTCG-------------------GGGGSCSEEEETTEEEE
T ss_pred HHHHHHHHHhCCCCCceeeCCCCcceEEEECCChhHhH-------------------hhhcCcCEEEECCEEEe
Confidence 999999999999 7789999999999999998753211 11135789999999763
No 59
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=99.96 E-value=1.7e-28 Score=251.76 Aligned_cols=157 Identities=22% Similarity=0.273 Sum_probs=110.1
Q ss_pred cceeEEEeCCEEEEeccCCCCC---------CCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCC
Q 013050 2 CKRAVEIKEGNIISIVSEEDWP---------RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGG 72 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~---------~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~G 72 (450)
+++||.|+||||++||+...+. ...+++++||++|++|+|||||+|+|+..+. .....+.+|
T Consensus 353 ~kADI~IkDGRIaAIGkagnpD~~dgV~pdl~ig~gtEVIDA~GkiVtPGfID~HvHl~~P~---------~~~eALasG 423 (840)
T 4gy7_A 353 IKADIGIKDGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGLIVTAGAIDCHVHYICPQ---------LVYEAISSG 423 (840)
T ss_dssp EEEEEEEETTEEEEEECCBCTTTCSSCCTTSBCCTTCEEEECTTCEEEECEEEEEEECCCTH---------HHHHHHHHT
T ss_pred EEeeEEEECCEEEEEeccCCcccccccccccccCCCCEEEECCCCEEccCeeeeccCCCCCC---------chHHHHHhh
Confidence 5789999999999999743211 1125789999999999999999999987553 345668899
Q ss_pred ceEEEeCCCCCC------CCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCcEEEEecccCCCC
Q 013050 73 ITTLIDMPLNSD------PSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIN 146 (450)
Q Consensus 73 vT~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 146 (450)
+|+++..+.+.. ............... .....+++..++.... ...+.+.++.+.|+.+++.+..+
T Consensus 424 VTTvv~gGtgp~~~~~~~~~~~~~~~~~~~l~a-~~~~~vn~g~~~~~~~---~~~~~L~el~~aGa~g~K~~~~~---- 495 (840)
T 4gy7_A 424 ITTLVGGGTGPAAGTRATTCTPSPTQMRLMLQS-TDDLPLNFGFTGKGSS---SKPDELHEIIKAGAMGLKLHEDW---- 495 (840)
T ss_dssp EEEEEEECSSSCHHHHHSSCCCSHHHHHHHHHH-TTTSSSEEEEEEECCC---SSSHHHHHHHHHTCSEEEEETTT----
T ss_pred HHHHHhCCCceecCcccccccchHHHHHHHHhh-hhcceeEEEEeCCCCc---ccHHHHHHhhhceeeEEEecccc----
Confidence 999998642111 112223333333322 2334566666543322 33456788889999999997543
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCcEEEecCChh
Q 013050 147 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEK 178 (450)
Q Consensus 147 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~ 178 (450)
..+++.+.+++..+++++.++.+|.+...
T Consensus 496 ---~~t~~~i~~aL~~A~e~g~~V~ih~e~~~ 524 (840)
T 4gy7_A 496 ---GSTPAAIDNCLTIAEHHDIQINIHTDTLN 524 (840)
T ss_dssp ---CCCHHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred ---CCCHHHHHHHHHHHHHhCCEEEEeccCcc
Confidence 45788999999999999999999986543
No 60
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=99.96 E-value=1.5e-27 Score=224.12 Aligned_cols=331 Identities=16% Similarity=0.137 Sum_probs=174.8
Q ss_pred ceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCC----CCCcccchHHHHHHHHhCCceEEEe
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP----GRTEWEGFPSGTKAAAAGGITTLID 78 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~----~~~~~~~~~~~~~~~~~~GvT~~~~ 78 (450)
.++|+|+||||.+|++..+.+ .+.++||++|++|+|||||+|+|.... ...+.+++.+..+.+++.|||+++.
T Consensus 21 ~~~i~I~dG~I~~i~~~~~~~---~~~~viD~~G~~v~PGfID~HvHg~~G~~~~d~~~~e~l~~~~~a~~~~GvTt~l~ 97 (381)
T 3iv8_A 21 KHAVIINGDKIEAVCPIESLP---SEMNVVDLNGANLSPGFIDLQLNGCGGVMFNDEITAETIDTMHKANLKSGCTSFLP 97 (381)
T ss_dssp SEEEEEETTEEEEEEEGGGSC---TTCEEEEEEEEEEEECEEEEEECEETTEETTTSCSHHHHHHHHHHHHHTTEEEEEE
T ss_pred ccEEEEECCEEEEEeCCCCCC---CCCeEEECCCCEEccCeEeeeecccCCCCCCCCCCHHHHHHHHHHHHhCCcccccc
Confidence 478999999999999865432 357899999999999999999997532 1134567888899999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHhcC--CceEEEEeccccCCCccchHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHH
Q 013050 79 MPLNSDPSTISTETLKLKVDAAEKR--IYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHI 156 (450)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l 156 (450)
+. .+.+.......+....+..+.. ....++.-+++..... .|+..- ......+.+++
T Consensus 98 t~-~T~~~e~l~~al~~~~~~~~~~~~~ilGiHlEGPfis~~~-----------~Ga~~~---------~~i~~p~~~~~ 156 (381)
T 3iv8_A 98 TL-ITSSDENMRQAIAAAREYQAKYPNQSLGLHLEGPYLNVMK-----------KGIHSV---------DFIRPSDDTMI 156 (381)
T ss_dssp EE-ESCCHHHHHHHHHHHHHHHHHCSSSBCCEEEECSSCCGGG-----------CTTSCT---------TTCCCCCHHHH
T ss_pred cc-CCCCHHHHHHHHHHHHHHHhcCCCceeEeeccCcccCHhh-----------cCCCCH---------HHcCCCCHHHH
Confidence 86 4444333333333333332221 2234444444332210 111000 00011234444
Q ss_pred HHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEE
Q 013050 157 KEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIV 236 (450)
Q Consensus 157 ~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (450)
++..+.+. ++++...+.+.. . .++++.+.+. |+.+.+.
T Consensus 157 ~~~~~~~~--~i~~vTlAPE~~--------------------------------~-~~~i~~l~~~-------gi~vs~G 194 (381)
T 3iv8_A 157 DTICANSD--VIAKVTLAPENN--------------------------------K-PEHIEKLVKA-------GIVVSIG 194 (381)
T ss_dssp HHHHHTTT--SEEEEEECCTTS--------------------------------C-HHHHHHHHHT-------TCEEEEC
T ss_pred HHHHhccC--CeEEEEECCCCC--------------------------------c-HHHHHHHHHC-------CCEEEec
Confidence 44433211 233333331100 0 1222222222 4555555
Q ss_pred ecCChhHHHHHHHHHHhCCCcEEEecCcchhccccc----------ccCCCCCceEEcCCC--CChhhHHHHHHHHhcCC
Q 013050 237 HLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAE----------EIPDGDTRFKCAPPI--RDAANKEKLWEALMDGH 304 (450)
Q Consensus 237 h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~g~ 304 (450)
|.. .+.++.+++.+.|+....-. +..+.+- .+............- -.+...+.+++... -
T Consensus 195 Hs~---A~~e~~~~a~~~Ga~~~THl---fNaM~~~~hR~PG~vga~l~~~~~~~elI~DG~Hv~p~~~~~~~~~~g--~ 266 (381)
T 3iv8_A 195 HTN---ATYSEARKSFESGITFATHL---FNAMTPMVGREPGVVGAIYDTPEVYAGIIADGFHVDYANIRIAHKIKG--E 266 (381)
T ss_dssp SBC---CCHHHHHHHHHTTCCEESST---TSSBCCCBTTBCHHHHHHHHCTTCEEEEECSSSSSCHHHHHHHHHHHG--G
T ss_pred CCC---CCHHHHHHHHHcCCCEeeeC---CCCCCCccCCCCchHHHHhcCCCcEEEEEcCCccCCHHHHHHHHHhcC--C
Confidence 533 23333444444443322100 0000000 000000111111110 01223333344442 5
Q ss_pred eeEEcCCCCCCChhh----h------cccCCCccccCCCCcchhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHHhCC-
Q 013050 305 IDMLSSDHSPTVPEL----K------LLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQ- 372 (450)
Q Consensus 305 ~~~~gtD~~~~~~~~----~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~gls~~~al~~aT~~~A~~lg~- 372 (450)
.+++.||..+..-.. . ....|......+.+.+....+...++.+ ...++|++++++|+|.|||+++|+
T Consensus 267 ~~~lvTDam~a~G~~dg~y~lgg~~v~v~~g~~~l~~g~lAGs~l~l~~~v~~~v~~~g~~~~~al~~aT~~pA~~lg~~ 346 (381)
T 3iv8_A 267 KLVLVTDATAPAGAEMDYFIFVGKKVYYRDGKCVDENGTLGGSALTMIEAVQNTVEHVGIALDEALRMATLYPAKAIGVD 346 (381)
T ss_dssp GEEEECCBCTTTTSCCSEEESSSCEEEEETTEEECTTCCBCSBCCCHHHHHHHHHHTTCCCHHHHHHHHTHHHHHHHTCT
T ss_pred EEEEEeCcccccCCCCCeeecCCeEEEEECCEEEcCCCCccChhhhHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHhCCC
Confidence 567889964321100 0 0011111112223344444455555554 456999999999999999999999
Q ss_pred CCCCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEe
Q 013050 373 VSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYK 434 (450)
Q Consensus 373 ~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 434 (450)
+++|+|++||.||||++|.+. +|..||++|++||.
T Consensus 347 ~~~G~i~~G~~ADlvvld~~~---------------------------~v~~t~~~G~~v~~ 381 (381)
T 3iv8_A 347 EKLGRIKKGMIANLTVFDRDF---------------------------NVKATVVNGQYEQN 381 (381)
T ss_dssp TTSSSCCTTSBCCEEEECTTC---------------------------CEEEEEETTEEEEC
T ss_pred CCCceECCCCcCCEEEECCCC---------------------------CEEEEEECCEEeeC
Confidence 568999999999999999542 68899999999984
No 61
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=99.95 E-value=1.3e-27 Score=232.35 Aligned_cols=322 Identities=15% Similarity=0.081 Sum_probs=172.7
Q ss_pred cceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCC-------CCcc--------------cc
Q 013050 2 CKRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG-------RTEW--------------EG 60 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~-------~~~~--------------~~ 60 (450)
.+++|+|+||||++|++..+.+...++.++||++ ++|+|||||+|+|+.... +..| ..
T Consensus 55 ~~~~V~I~~g~I~~vg~~~~~~~~~~~~~viD~~-~~v~PGlID~H~H~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 133 (420)
T 2imr_A 55 SPGGVVVVGETVAAAGHPDELRRQYPHAAEERAG-AVIAPPPVNAHTHLDMSAYEFQALPYFQWIPEVVIRGRHLRGVAA 133 (420)
T ss_dssp SSEEEEEETTEEEEEECHHHHHHHCTTCEEEECC-SEESSCCCEEEEESSCCHHHHHHCHHHHTSHHHHHHHTTCCHHHH
T ss_pred eccEEEEECCEEEEecCcccccccCCCCeeecCC-eEECCCCEecCcCcchhhhhhccCCHHHHHHHhhhhhhhccCHHH
Confidence 4688999999999999753211001356899999 999999999999997641 1111 01
Q ss_pred hHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCcc----chHH----HHHHHHcC
Q 013050 61 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAY----NASA----LEALLNAG 132 (450)
Q Consensus 61 ~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~g 132 (450)
.....+.++++|||++++++ +. ...+.. .... ..++............. ..+. ++.+.+.+
T Consensus 134 ~~~~~~~~l~~GvTtv~d~~-~~------~~~~~~---~~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (420)
T 2imr_A 134 AQAGADTLTRLGAGGVGDIV-WA------PEVMDA---LLAR-EDLSGTLYFEVLNPFPDKADEVFAAARTHLERWRRLE 202 (420)
T ss_dssp HHHHHHHHHHTTCCCEEEEE-CS------HHHHHH---HHTC-TTCCEEEEEEECBCCGGGHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCcEEEEEcc-CC------HHHHHH---HHHh-cCcEEEEEeeecCCCchhhHHHHHHHHHHHHHHhccc
Confidence 13345688999999999986 21 222221 1222 12222211111111111 1122 22222322
Q ss_pred CcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecC-ChhhhhhhhhhccCc----------CCccccccccC
Q 013050 133 VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE-MEKGSERHVKLEDDT----------LDTRSYSTYLK 201 (450)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~-~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 201 (450)
...++.+..+. ..+..+.+.++++++.|+++|++|.+|+. +...+...+...+.. ..... ....+
T Consensus 203 ~~~i~~~~~~~---~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~ 278 (420)
T 2imr_A 203 RPGLRLGLSPH---TPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMFRTGGGPLWDNRMPALYPHTLAE-VIGRE 278 (420)
T ss_dssp BTTEEEEEEEC---CSSSBCHHHHHHHHHHHHHHTCCBEEEESCSHHHHHHHHHSCSTTGGGSCGGGSCSSHHH-HHTSC
T ss_pred CCceEEEecCC---cCCCcCHHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHhhccccccccccchhhhhhh-hcccc
Confidence 22334444332 22457889999999999999999999995 433333333221100 00000 00000
Q ss_pred CCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCce
Q 013050 202 TRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRF 281 (450)
Q Consensus 202 ~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~ 281 (450)
..+... .++.+.+... . . ......|+.|++. +. ++.+++.|+. +..||...... +
T Consensus 279 ~~~~~~---~~~~~~~~g~-l---~-~~~~i~H~~~l~~--~~---i~~l~~~g~~--~~~~p~~~~~~-------~--- 333 (420)
T 2imr_A 279 PGPDLT---PVRYLDELGV-L---A-ARPTLVHMVNVTP--DD---IARVARAGCA--VVTCPRSNHHL-------E--- 333 (420)
T ss_dssp CCTTCC---HHHHHHHHTC-G---G-GCCEEEECCSCCH--HH---HHHHHHHTCC--EEECHHHHHHT-------T---
T ss_pred ccCCCC---HHHHHHHcCC-C---C-CCeEEEecCcCCH--HH---HHHHHHcCCe--EEECHHHHHHh-------c---
Confidence 011000 1122111110 0 0 0023345555442 44 4444444644 44477643211 0
Q ss_pred EEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHH-hcCCCHHHHHH
Q 013050 282 KCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLAS 360 (450)
Q Consensus 282 ~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~gls~~~al~ 360 (450)
...++ +.++++.|+.+++|||+.+..... .. +..+..... ..++|++++++
T Consensus 334 ~~~~~---------l~~~~~~Gv~~~lgtD~~~~~~~~---------------~~----~~~~~~~~~~~~~ls~~~al~ 385 (420)
T 2imr_A 334 CGTFD---------WPAFAAAGVEVALGTDSVASGETL---------------NV----REEVTFARQLYPGLDPRVLVR 385 (420)
T ss_dssp CCCCC---------HHHHHHTTCCEEECCCCHHHHSCS---------------CT----HHHHHHHHHHCTTSCHHHHHH
T ss_pred cCCCC---------HHHHHHCCCeEEEECCCCccCCCC---------------CH----HHHHHHHHhcCCCCCHHHHHH
Confidence 01121 335688999999999974321000 00 111111112 25899999999
Q ss_pred HHhhchhHHhCC-CCCCccccCCCccEEEEeCCC
Q 013050 361 WWSERPAKLAGQ-VSKGAIAIGNHADLVVWEPEA 393 (450)
Q Consensus 361 ~aT~~~A~~lg~-~~~G~I~~G~~ADlvv~d~~~ 393 (450)
++|.|||++||+ +++|+|++||+||| |+|.++
T Consensus 386 ~aT~n~A~~lgl~~~~GsL~~Gk~ADl-vvd~~~ 418 (420)
T 2imr_A 386 AAVKGGQRVVGGRTPFLRRGETWQEGF-RWELSR 418 (420)
T ss_dssp HHHHHHHHHHC--CCCCSTTSBCCGGG-BGGGCC
T ss_pred HHHHHHHHHhCCCCCceeeCCCCccCE-EEECCC
Confidence 999999999999 66999999999999 778664
No 62
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=99.95 E-value=6.8e-27 Score=223.14 Aligned_cols=80 Identities=25% Similarity=0.316 Sum_probs=64.8
Q ss_pred cCCCCcchhhHHHHHHHHHH-hcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCceeeCCCCCcccCCC
Q 013050 330 AWGGISSLQFVLPVTWSYGR-KYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHP 408 (450)
Q Consensus 330 ~~~g~~~~~~~~~~~~~~~~-~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~ 408 (450)
..++..+....+...+..+. ..++|++++++++|.|||++||+++.|+|++|+.|||+++|.+
T Consensus 296 ~~g~~~g~~~~l~~~l~~~~~~~~~~~~~~l~~~T~~~A~~lgl~~~G~i~~G~~ADlv~~d~~---------------- 359 (376)
T 1o12_A 296 EDGTLAGSTLFFSQAVKNFRKFTGCSITELAKVSSYNSCVELGLDDRGRIAEGTRADLVLLDED---------------- 359 (376)
T ss_dssp TTSCBCCBCCCHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCTTSSCCSTTSBCCEEEECTT----------------
T ss_pred CCCcccccccCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCccCCCCCcCCEEEECCC----------------
Confidence 34455555556666665554 4789999999999999999999943599999999999999955
Q ss_pred CccccCCceEeeEEEEEEECCeEEEecC
Q 013050 409 SISAYLGRRLSGKVLATISRGNLVYKEG 436 (450)
Q Consensus 409 ~~~~~~~~~~~~~v~~v~v~G~~v~~~g 436 (450)
.+|..||++|++||++|
T Consensus 360 -----------~~v~~v~~~G~~v~~~~ 376 (376)
T 1o12_A 360 -----------LNVVMTIKEGEVVFRSR 376 (376)
T ss_dssp -----------CCEEEEEETTEEEEEC-
T ss_pred -----------CCEEEEEECCEEEeecC
Confidence 27899999999999885
No 63
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=99.94 E-value=3.3e-26 Score=226.30 Aligned_cols=251 Identities=17% Similarity=0.089 Sum_probs=148.9
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHH-hcCCceEEEEeccccCCCccchHHHHHHHH-------cCCcEE
Q 013050 65 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAA-EKRIYVDVGFWGGLVPENAYNASALEALLN-------AGVLGL 136 (450)
Q Consensus 65 ~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~~ 136 (450)
.+.+.+.|||++.++.. . ...+..+.+.. +....+++..+... +..+.+.+... ..+.++
T Consensus 228 ~~~~~~~GiTsv~d~~~-~------~~~~~~~~~l~~~g~l~~rv~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~gv 295 (534)
T 3icj_A 228 QEHLLSLGVHSVGFMSV-G------EKALKALFELEREGRLKMNVFAYLSP-----ELLDKLEELNLGKFEGRRLRIWGV 295 (534)
T ss_dssp HHHHHHTTEEEEEEEEE-C------HHHHHHHHHHHHTTCCCSEEEEEECG-----GGHHHHHHHTCCSEECSSEEEEEE
T ss_pred HHHHHhCCCEEEEeCCC-C------HHHHHHHHHHHhCCCCcEEEEEecCH-----HHHHHHHHhccccCCCCcEEEEeE
Confidence 44677899999999851 1 23333333322 24456666654321 22223332211 114466
Q ss_pred EEeccc----------------CCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCcccccccc
Q 013050 137 KSFMCP----------------SGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYL 200 (450)
Q Consensus 137 ~~~~~~----------------~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (450)
|.+..- ++..+.+..+.++++++++.|+++|++|.+|+...
T Consensus 296 K~~~DG~~~~~tA~l~~pY~d~~~~~g~~~~~~e~l~~~v~~A~~~G~~v~~Ha~gd----------------------- 352 (534)
T 3icj_A 296 KLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIVEVIERAKPLGLDVAVHAIGD----------------------- 352 (534)
T ss_dssp EEESCCCTTTTCSCCSSCBTTBTTCCCCCSSCHHHHHHHHHHHTTTTCEEEEEECSH-----------------------
T ss_pred EEEEeCCCCccchhhcCCccCCCCCCCcccCCHHHHHHHHHHHHHCCCEEEEEEcCh-----------------------
Confidence 665321 11234466799999999999999999999999542
Q ss_pred CCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCc
Q 013050 201 KTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTR 280 (450)
Q Consensus 201 ~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 280 (450)
..++.+++..++. +.+..+.|+.. -+.+.++.+++.|+.++. +|.+...+. ....
T Consensus 353 ---------~ai~~~l~a~~~~-------~~r~~ieH~~~--~~~e~i~~la~~gv~~~~--~P~~~~~~~-~~~~---- 407 (534)
T 3icj_A 353 ---------KAVDVALDAFEEA-------EFSGRIEHASL--VRDDQLERIKELKVRISA--QPHFIVSDW-WIVN---- 407 (534)
T ss_dssp ---------HHHHHHHHHHHHH-------TCCCEEEECCB--CCHHHHHHHHHHTCEEEE--CTTHHHHCT-THHH----
T ss_pred ---------HHHHHHHHHHHhc-------cCCCEEEECCC--CCHHHHHHHHHcCCeEEE--ccccccchh-HHHH----
Confidence 2356666666654 35567788775 344566677777765444 676543211 0000
Q ss_pred eEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHH--HHHhcCCCHHHH
Q 013050 281 FKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS--YGRKYGVTLEQL 358 (450)
Q Consensus 281 ~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~gls~~~a 358 (450)
...+ ........+..+++. +.+++|||+. ..+...+ ......... +..+.++|++++
T Consensus 408 -~lg~--~r~~~~~p~~~l~~~-v~valGSD~p-~~~~~p~----------------~~~~~av~r~~~~~~~~ls~~ea 466 (534)
T 3icj_A 408 -RVGE--ERAKWAYRLKTLSSI-TKLGFSTDSP-IEPADPW----------------VSIDAAVNRYVVDPGERVSREEA 466 (534)
T ss_dssp -HHHH--HHGGGBTCHHHHHHH-SCEEECCTTT-TSCCCHH----------------HHHHHHHHCCSSCGGGCCCHHHH
T ss_pred -hhCH--HHHhccHHHHHHHHh-CCEEeecCCC-CCCCCHH----------------HHHHHHHhccccCcccCCCHHHH
Confidence 0000 000011234566778 9999999963 2111110 000001100 123568999999
Q ss_pred HHHHhhchhHHhCCCCCCccccCCCccEEEEeCCCcee
Q 013050 359 ASWWSERPAKLAGQVSKGAIAIGNHADLVVWEPEAEFE 396 (450)
Q Consensus 359 l~~aT~~~A~~lg~~~~G~I~~G~~ADlvv~d~~~~~~ 396 (450)
|+++|.|||+++|++++|+|+|||.|||||+|.|+...
T Consensus 467 L~~~T~~~A~~lg~e~~GsLe~Gk~ADlvvld~dpl~~ 504 (534)
T 3icj_A 467 LHLYTHGSAQVTLAEDLGKLERGFRAEYIILDRDPLKE 504 (534)
T ss_dssp HHHTTHHHHHHTTCTTCSCCSTTSBCCEEEESSCTTC-
T ss_pred HHHHHHHHHHHhCCCCCeEECCCCCcCEEEECCChhhc
Confidence 99999999999999778999999999999999887443
No 64
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=99.94 E-value=2.4e-25 Score=214.47 Aligned_cols=102 Identities=15% Similarity=0.074 Sum_probs=72.3
Q ss_pred HHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CC
Q 013050 296 LWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VS 374 (450)
Q Consensus 296 l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg~-~~ 374 (450)
...+...|..+.+++|..+...... ...+ .....++|++|+|+++|.|||++||+ ++
T Consensus 311 ~~~~~~~g~~~~~g~d~~~~~~~~~---------------------~~~~-~~~~~gls~~eal~~~T~~pA~~lgl~~~ 368 (426)
T 3mkv_A 311 IEIMKRAGVKMGFGTDLLGEAQRLQ---------------------SDEF-RILAEVLSPAEVIASATIVSAEVLGMQDK 368 (426)
T ss_dssp HHHHHHHTCCBCCCCCCCGGGGGGT---------------------THHH-HHHHTTSCHHHHHHHTTHHHHHHTTCBTT
T ss_pred hHHhhhcCceeeeccCCcccccchH---------------------HHHH-HHHHhCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 3556667888889999653321110 0111 12356899999999999999999999 77
Q ss_pred CCccccCCCccEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEe
Q 013050 375 KGAIAIGNHADLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYK 434 (450)
Q Consensus 375 ~G~I~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 434 (450)
+|+|+|||.|||||||.||..++. .+.... .+|+.||++||+|+.
T Consensus 369 ~Gsi~~G~~ADlvvlD~dPl~di~---~~~~~~------------~~v~~Vi~~G~vv~~ 413 (426)
T 3mkv_A 369 LGRIVPGAHADVLVVDGNPLKSVD---CLLGQG------------EHIPLVMKDGRLFVN 413 (426)
T ss_dssp BSSCCTTSBCCEEEESSCTTTCST---TTCSSS------------TTCCEEEETTEEEEE
T ss_pred cceeCCCCcceEEEECCChHHhHH---HHhCCC------------CCccEEEECCEEEEC
Confidence 899999999999999988643331 111111 268899999998764
No 65
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=99.93 E-value=9.4e-27 Score=234.31 Aligned_cols=358 Identities=17% Similarity=0.157 Sum_probs=182.7
Q ss_pred cceeEEEeCCEEEEeccCCCCC-------CCCCCCcEEecCCCEEeccceeeccccCCCCCCcccchHHHHHHHHhCCce
Q 013050 2 CKRAVEIKEGNIISIVSEEDWP-------RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGIT 74 (450)
Q Consensus 2 ~~~~V~I~~g~I~~Ig~~~~~~-------~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT 74 (450)
+++||+|+||||++||+..++. ...+++++||++|++|+|||||+|+|+..+... ......+.+
T Consensus 81 ~kaDIlIkDGrIaaIG~ag~pd~~d~vdl~~~~g~eVIDA~GkiV~PG~ID~HvH~~~~~~~---------~~a~~~~~~ 151 (566)
T 4ep8_C 81 VKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAGGIDTHIHWICPQQA---------EEALVSGVT 151 (566)
T ss_dssp EEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEEEECEEEEEEECSCTTHH---------HHHHHHTEE
T ss_pred EEeEEEEECCEEEEeecCCCcccccccccccCCCCEEEECCCCEEEcCEEEecccccCCCcc---------chhhhhhHH
Confidence 5799999999999999743221 112578999999999999999999999876422 122334444
Q ss_pred EEEeCCCCCC-----CCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCcEEEEecccCCCCCCC
Q 013050 75 TLIDMPLNSD-----PSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFP 149 (450)
Q Consensus 75 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 149 (450)
+......... .....................+++..++...... ......+...++.+++.+..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~---~~~~~~~~~a~~~g~~~~~~~------- 221 (566)
T 4ep8_C 152 TMVGGGTGPAAGTHATTCTPGPWYISRMLQAADSLPVNIGLLGKGNVSQ---PDALREQVAAGVIGLKIHEDW------- 221 (566)
T ss_dssp EEEEECSSSSHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEEEECCCSC---HHHHHHHHHHTCSEEEEEGGG-------
T ss_pred HHhhCceEEEEecCCCCCchHHHHHHHHHHhccccceeeeeeccccccc---chhhHHHhhhccccccccccc-------
Confidence 4443210000 0111122222222333445567777766544433 345666677888888886544
Q ss_pred CCCHHHHHHHHHHHHhcCCcEEEecCChhhhh---hhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCC
Q 013050 150 MTNASHIKEGLSVLARYKRPLLVHAEMEKGSE---RHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG 226 (450)
Q Consensus 150 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~ 226 (450)
......+......+...+....+|........ ........... ..+....+.......+.+....+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~e~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~---- 293 (566)
T 4ep8_C 222 GATPAAIDCALTVADEMDIQVALHSDTLNESGFVEDTLAAIGGRTI----HTFHTEGAGGGHAPDIITACAHPNIL---- 293 (566)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCE----EETTTTSTTSSSTTTGGGGGGCTTEE----
T ss_pred cccchhhhhHhHHHHHhcchhhhhhhhHHHHHHHHhhHhhccCccc----cccccccchhHHHHHHHHHHHHHhhc----
Confidence 34566777788888889999999985543311 11110000000 00000000000000000110000000
Q ss_pred CCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCee
Q 013050 227 PAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID 306 (450)
Q Consensus 227 ~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~ 306 (450)
..+.+..|.... ...+...... ...+++..+..... ...... .........+..+..|...
T Consensus 294 ---~~~~~~~~~~~~-~~~~e~~~~~---------~~~h~l~~~~~~~~---~~~~~~---~~~~~~~~~~~l~~~G~~~ 354 (566)
T 4ep8_C 294 ---PSSTNPTLPYTL-NTIDEHLDML---------MVCHHLDPDIAEDV---AFAESR---IRRETIAAEDVLHDLGAFS 354 (566)
T ss_dssp ---EEECSTTSSCBT-THHHHHHHHH---------HHHHTCCTTCHHHH---HHHHHH---CCHHHHHHHHHHHHHTSSC
T ss_pred ---CCceeehhHHHH-HHhhcccceE---------EEeecccCChhhHH---hhccCC---CcccchHHHHHHHhCCCcc
Confidence 000111111111 1111111110 01112211110000 000000 0112233345566679999
Q ss_pred EEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHH-HHHHhcCCCHHHHHHHHhhchhHHhCC-CCCCccccCCCc
Q 013050 307 MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTW-SYGRKYGVTLEQLASWWSERPAKLAGQ-VSKGAIAIGNHA 384 (450)
Q Consensus 307 ~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~gls~~~al~~aT~~~A~~lg~-~~~G~I~~G~~A 384 (450)
.+++|+.+.....+.. ...+.+.......+..+. ......++|++++++++|+|||++||+ +++|+|++||+|
T Consensus 355 ~i~sD~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~gls~~eal~~aTiNPAralGL~d~iGSIevGK~A 429 (566)
T 4ep8_C 355 LTSSDSQAMGRVGEVI-----LRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTINPALTHGIAHEVGSIEVGKLA 429 (566)
T ss_dssp EECCCTTSSSCTTCHH-----HHHHHHHHHHHHHHCSCTTCCSSSCHHHHHHHHGGGTHHHHHHTTCTTTSSSSCTTSBC
T ss_pred eEeecccccccccccc-----cccCCCCchHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHhCCCCCCcCCCCCCCC
Confidence 9999988765332210 000000000000000000 001233589999999999999999999 789999999999
Q ss_pred cEEEEeCCCceeeCCCCCcccCCCCccccCCceEeeEEEEEEECCeEEEe
Q 013050 385 DLVVWEPEAEFELDNDHPVHMKHPSISAYLGRRLSGKVLATISRGNLVYK 434 (450)
Q Consensus 385 Dlvv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 434 (450)
||||||++.. - .++.+|+++|++||-
T Consensus 430 DLVL~Dp~~f---------~---------------vkP~~v~~~G~iv~a 455 (566)
T 4ep8_C 430 DLVVWSPAFF---------G---------------VKPATVIKGGMIAIA 455 (566)
T ss_dssp CEEEECGGGT---------T---------------TSCSEEEETTEEEEE
T ss_pred CEEEECcccc---------C---------------CCeeEEeeCCEEEEc
Confidence 9999996631 0 156799999999993
No 66
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}
Probab=99.31 E-value=1.1e-12 Score=94.74 Aligned_cols=54 Identities=22% Similarity=0.303 Sum_probs=43.6
Q ss_pred ceeEEEeCCEEEEeccCCCCCCCCCCCcEEecCCCEEeccceeeccccCCCCCC
Q 013050 3 KRAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT 56 (450)
Q Consensus 3 ~~~V~I~~g~I~~Ig~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~ 56 (450)
.++|+|+||+|++|++..+.+......+++|++|++|+|||||+|+|+..+...
T Consensus 23 ~~~i~I~~g~I~~ig~~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~p~~~ 76 (81)
T 3ggm_A 23 VSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAIPGLNDSHIHVIRGLEH 76 (81)
T ss_dssp ESEEEEETTEEEEEESGGGGGGCCTTCEEEECTTCEEEECCCCTTEEEECCCC-
T ss_pred ccEEEEECCEEEEEeCchHhcccCCCCEEEECCCCEEeeCeEeeeeCCCCcccc
Confidence 468999999999999865432222467899999999999999999999887643
No 67
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=99.14 E-value=3.6e-09 Score=96.79 Aligned_cols=255 Identities=16% Similarity=0.147 Sum_probs=135.1
Q ss_pred cceeeccccCCCCCCc----------ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEe
Q 013050 42 GLIDVHAHLDDPGRTE----------WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 111 (450)
Q Consensus 42 G~iD~H~H~~~~~~~~----------~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (450)
|+||+|+|+..+...+ .+......+.+.++|+|++++.+ .. +.......+....+.. .+++...
T Consensus 6 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~iv~~~-~~-~~~~~~~~~~~~~~~~----~~~v~~~ 79 (291)
T 1bf6_A 6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMT-NR-YMGRNAQFMLDVMRET----GINVVAC 79 (291)
T ss_dssp SEEEEEECSSEECHHHHTCGGGEECCHHHHHHHHHHHHHTTEEEEEECC-CG-GGTCCHHHHHHHHHHH----CCEEEEE
T ss_pred ceeeeccCeecCCcccccCCCcccCCHHHHHHHHHHHHHcCCCEEEecC-CC-cCCCCHHHHHHHHHhc----CCeEEEe
Confidence 9999999996432110 01233455677889999999886 22 1112233333332222 1233333
Q ss_pred ccc-----cCC-----Cccch-HHHHHHHHcCC-------cEEEE-ecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEE
Q 013050 112 GGL-----VPE-----NAYNA-SALEALLNAGV-------LGLKS-FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV 172 (450)
Q Consensus 112 ~~~-----~~~-----~~~~~-~~~~~~~~~g~-------~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 172 (450)
.++ .+. +.+.+ +.+.+.+..|+ ..+.. ...+. .......+.+++.++.|+++|++|.+
T Consensus 80 ~G~~~~~~hP~~~~~~~~~~l~~~~~~~l~~gi~~~~~~~~~iGe~gld~~---~~~~~~~~~~~~~~~~a~~~~~pv~i 156 (291)
T 1bf6_A 80 TGYYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEG---KITPLEEKVFIAAALAHNQTGRPIST 156 (291)
T ss_dssp ECCCCGGGCCTHHHHSCHHHHHHHHHHHHHTCSTTSSCCEEEEEEEECBTT---BCCHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred eccccCccCcHhhhcCCHHHHHHHHHHHHHhccCCcCcceeeEEEEecCCC---CCCHHHHHHHHHHHHHHHHHCCeEEE
Confidence 233 121 11111 23333344442 12211 11111 11112235678899999999999999
Q ss_pred ecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHH
Q 013050 173 HAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAK 252 (450)
Q Consensus 173 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 252 (450)
|+..... ..+.++++++. + .+..++.+.|++.. .+.+.++++.
T Consensus 157 H~~~~~~--------------------------------~~~~~~~l~~~--~--~~~~~~~i~H~~~~-~~~~~~~~~~ 199 (291)
T 1bf6_A 157 HTSFSTM--------------------------------GLEQLALLQAH--G--VDLSRVTVGHCDLK-DNLDNILKMI 199 (291)
T ss_dssp ECGGGCS--------------------------------HHHHHHHHHHT--T--CCGGGEEECCCCSS-CCHHHHHHHH
T ss_pred eCCCCCC--------------------------------hHHHHHHHHHc--C--CCchhEEEECCCCC-CCHHHHHHHH
Confidence 9942110 01334455443 0 11346788999643 5567778887
Q ss_pred hCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCC--eeEEcCCCCCCChhhhcccCCCcccc
Q 013050 253 TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH--IDMLSSDHSPTVPELKLLDEGNFLKA 330 (450)
Q Consensus 253 ~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~--~~~~gtD~~~~~~~~~~~~~~~~~~~ 330 (450)
+.|..+.+...... . .++ .......++++++.+. .++++||.. ...... .
T Consensus 200 ~~G~~i~~~~~~~~-----------~-----~~~--~~~~~~~~~~~~~~~~~dril~~TD~p-~~~~~~---------~ 251 (291)
T 1bf6_A 200 DLGAYVQFDTIGKN-----------S-----YYP--DEKRIAMLHALRDRGLLNRVMLSMDIT-RRSHLK---------A 251 (291)
T ss_dssp HTTCEEEECCTTCT-----------T-----TSC--HHHHHHHHHHHHHTTCGGGEEECCCCC-SGGGSG---------G
T ss_pred HCCCEEEEccCccc-----------C-----CCC--HHHHHHHHHHHHHhCCCCeEEEcCCCC-CCccch---------h
Confidence 88876665421100 0 011 1234455677777773 468999953 321111 1
Q ss_pred CCCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhC
Q 013050 331 WGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAG 371 (450)
Q Consensus 331 ~~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg 371 (450)
.++ .+....+...+..+...|+|.+++.++.|.||+++|+
T Consensus 252 ~~~-~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~N~~rl~~ 291 (291)
T 1bf6_A 252 NGG-YGYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ 291 (291)
T ss_dssp GTS-CCTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHCC
T ss_pred cCC-CCHHHHHHHHHHHHHHcCCCHHHHHHHHHHhHHHHhC
Confidence 112 2333334444455566789999999999999999885
No 68
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=99.07 E-value=8.4e-09 Score=95.75 Aligned_cols=277 Identities=16% Similarity=0.141 Sum_probs=132.9
Q ss_pred cceeeccccCCCCCCc-----c-----cchHH----HHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceE
Q 013050 42 GLIDVHAHLDDPGRTE-----W-----EGFPS----GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 107 (450)
Q Consensus 42 G~iD~H~H~~~~~~~~-----~-----~~~~~----~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (450)
||||+|+|+...+... . ++... ....+.++|||++++.+ . .....+...+....+.........
T Consensus 16 GliD~H~HL~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~-~-~~~~~~~~~~~~la~~~~~~i~~~ 93 (330)
T 2ob3_A 16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVS-T-FDIGRDVSLLAEVSRAADVHIVAA 93 (330)
T ss_dssp CSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECC-C-GGGTCCHHHHHHHHHHHTCEEECE
T ss_pred CCceeeeCeecCCchhccCCCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCC-C-CCcCCCHHHHHHHHHHhCCcEEEE
Confidence 9999999997532111 0 12222 25678899999999885 1 111233444444433322122223
Q ss_pred EEEeccccCC-----Cccch-HHHHHHHHc-------CCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEec
Q 013050 108 VGFWGGLVPE-----NAYNA-SALEALLNA-------GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 174 (450)
Q Consensus 108 ~~~~~~~~~~-----~~~~~-~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 174 (450)
.+.+. ..+. +.+.+ +.+.+.+.. .+..++....+ .......+.+++.+++|++.|+||.+|.
T Consensus 94 ~G~hp-~~p~~~~~~~~~~l~~~l~~~~~~gi~~~~~k~~aiEiGld~----~~~~~q~~~f~~q~~lA~~~glPv~iH~ 168 (330)
T 2ob3_A 94 TGLWF-DPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATTG----KATPFQELVLKAAARASLATGVPVTTHT 168 (330)
T ss_dssp EECCS-CCCHHHHTCCHHHHHHHHHHHHHTCSTTSCCCCSEEEEECSS----SCCHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred ecCCc-CCCchhccCCHHHHHHHHHHHHHhhccccccceeEEEEeCCC----CCCHHHHHHHHHHHHHHHHhCCeEEEEC
Confidence 34442 0111 11122 223333322 23333332321 0011223447888999999999999999
Q ss_pred CChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhC
Q 013050 175 EMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTN 254 (450)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 254 (450)
.... .... ++++++++. + ....++.+.|+... .+.+..+++.+.
T Consensus 169 ~~~~------------------------------r~a~-e~l~iL~~~--g--~~~~~~~i~H~f~~-~~~e~a~~~~~~ 212 (330)
T 2ob3_A 169 AASQ------------------------------RDGE-QQAAIFESE--G--LSPSRVCIGHSDDT-DDLSYLTALAAR 212 (330)
T ss_dssp CGGG------------------------------THHH-HHHHHHHHT--T--CCGGGEEECSGGGC-CCHHHHHHHHHT
T ss_pred CCCC------------------------------CCHH-HHHHHHHHc--C--cCcccEEEeCCCCC-CCHHHHHHHHhC
Confidence 4110 0012 444555543 0 00124457898722 456788888888
Q ss_pred CCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcC--CeeEEcCCCCCC-Chhh-hcccCCCc--c
Q 013050 255 GDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG--HIDMLSSDHSPT-VPEL-KLLDEGNF--L 328 (450)
Q Consensus 255 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g--~~~~~gtD~~~~-~~~~-~~~~~~~~--~ 328 (450)
|..+...... ...+....... ...-...++ .......+.++++.+ -.++++||. |. .... ... |.. .
T Consensus 213 G~~i~~~~~G-~~tf~~~~~~~-~~~~~~~~~--~~~~~~~l~~~~~~~p~drilleTD~-p~~l~~~~~~~--g~~~~~ 285 (330)
T 2ob3_A 213 GYLIGLDHIP-YSAIGLEDNAS-ASALLGIRS--WQTRALLIKALIDQGYMKQILVSNDW-TFGFSSYVTNI--MDVMDR 285 (330)
T ss_dssp TCEEEECCTT-CCCTTCTTCHH-HHHHHCSSC--HHHHHHHHHHHHHTTCGGGEEECCCC-CSEECSSSTTH--HHHHHH
T ss_pred CCEEEeCCCc-ccccccccccc-ccccccCCC--HHHHHHHHHHHHHhCCCCeEEEeCCC-CCCcccccccC--CCcccc
Confidence 8766554201 00000000000 000000000 012234466777777 456899995 32 1000 000 000 0
Q ss_pred ccCCCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhC
Q 013050 329 KAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAG 371 (450)
Q Consensus 329 ~~~~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg 371 (450)
+.++ +....+...+..+.+.|+|++++.++.|.||+++|+
T Consensus 286 n~pn---~~~~~~~~~ia~l~~~G~~~eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 286 VNPD---GMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLS 325 (330)
T ss_dssp HCTT---GGGHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHHS
T ss_pred cCCC---CcchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc
Confidence 0000 111122333344555899999999999999999997
No 69
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=99.06 E-value=1.9e-08 Score=90.32 Aligned_cols=244 Identities=18% Similarity=0.113 Sum_probs=126.1
Q ss_pred ceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCC----
Q 013050 43 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN---- 118 (450)
Q Consensus 43 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 118 (450)
+||+|+|+....+. .+.......+.++||++++..+ . . ......+.... ..... +....++.+..
T Consensus 5 ~iD~H~Hl~~~~~~--~~~~~~l~~~~~~Gv~~~v~~~-~-~--~~~~~~~~~l~---~~~~~--~~~~~G~hP~~~~~~ 73 (259)
T 1zzm_A 5 FIDTHCHFDFPPFS--GDEEASLQRAAQAGVGKIIVPA-T-E--AENFARVLALA---ENYQP--LYAALGLHPGMLEKH 73 (259)
T ss_dssp EEESCBCTTSTTTT--TCHHHHHHHHHHTTEEEEEEEC-C-S--GGGHHHHHHHH---HHCTT--EEEEECCCGGGGGGC
T ss_pred EEEeeecCCchhhc--cCHHHHHHHHHHcCCCEEEEec-C-C--HHHHHHHHHHH---HhCCC--eEEEEEecccccccC
Confidence 89999999875432 3466777888999999998764 1 1 12233333222 22212 21222222221
Q ss_pred -ccchHHHHHHHHc---CCcEEEE-ecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCc
Q 013050 119 -AYNASALEALLNA---GVLGLKS-FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDT 193 (450)
Q Consensus 119 -~~~~~~~~~~~~~---g~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~ 193 (450)
....+.+.++++. ++.++.. ...+...........+.+...++.|+++|+||.+|+++..
T Consensus 74 ~~~~~~~l~~~~~~~~~~~~~iGEiGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~a~--------------- 138 (259)
T 1zzm_A 74 SDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTH--------------- 138 (259)
T ss_dssp CHHHHHHHHHHHHHCCSSEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCH---------------
T ss_pred CHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecccH---------------
Confidence 1234566665543 3344322 1111100000112345788899999999999999995421
Q ss_pred cccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccc
Q 013050 194 RSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEE 273 (450)
Q Consensus 194 ~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 273 (450)
+.+++++++.. ...++. .|+.+ ...+.++++.+.|..+.. +.... .
T Consensus 139 -------------------~~~~~il~~~~-----~~~~~i-~H~~~--g~~~~~~~~~~~g~~i~~--~g~~~-~---- 184 (259)
T 1zzm_A 139 -------------------DKLAMHLKRHD-----LPRTGV-VHGFS--GSLQQAERFVQLGYKIGV--GGTIT-Y---- 184 (259)
T ss_dssp -------------------HHHHHHHHHHC-----CTTCEE-ETTCC--SCHHHHHHHHHTTCEEEE--CGGGG-C----
T ss_pred -------------------HHHHHHHHhcC-----CCCCEE-EEcCC--CCHHHHHHHHHCCCEEEE--Cceee-c----
Confidence 34555555441 022333 48765 345566666666754443 32110 0
Q ss_pred cCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHH-HhcC
Q 013050 274 IPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYG 352 (450)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g 352 (450)
........+.+... .-.++++||+ |...... + .|.......+......+ ...|
T Consensus 185 --------------~~~~~~~~~~~~~~-~dril~eTD~-P~~~p~~------~----~g~~~~p~~l~~~~~~la~~~g 238 (259)
T 1zzm_A 185 --------------PRASKTRDVIAKLP-LASLLLETDA-PDMPLNG------F----QGQPNRPEQAARVFAVLCELRR 238 (259)
T ss_dssp --------------TTTCSHHHHHHHSC-GGGEEECCCB-TSSCCTT------C----TTSCCCGGGHHHHHHHHHHHCS
T ss_pred --------------cccHHHHHHHHhCC-HHHEEEecCC-CCccCCC------C----CCCCCcHHHHHHHHHHHHHHHC
Confidence 00011111111111 1346799995 4321110 0 01111112344444444 4579
Q ss_pred CCHHHHHHHHhhchhHHhCC
Q 013050 353 VTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 353 ls~~~al~~aT~~~A~~lg~ 372 (450)
+|.+++.++.|.|++++|++
T Consensus 239 ~~~e~~~~~~~~Na~rl~~l 258 (259)
T 1zzm_A 239 EPADEIAQALLNNTYTLFNV 258 (259)
T ss_dssp SCHHHHHHHHHHHHHHHHCC
T ss_pred cCHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999986
No 70
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=99.05 E-value=5.7e-09 Score=94.46 Aligned_cols=243 Identities=14% Similarity=0.201 Sum_probs=126.2
Q ss_pred cceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccc-cCC---
Q 013050 42 GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGL-VPE--- 117 (450)
Q Consensus 42 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 117 (450)
++||+|+|+....+. .+.......+.++||++++..+ .. ......+....+.........++.++.. ...
T Consensus 5 ~~iD~H~Hl~~~~~~--~~~~~~l~~~~~~Gv~~~v~~~-~~---~~~~~~~~~l~~~~~~~i~~~~GihP~~~~~~~~~ 78 (272)
T 2y1h_A 5 GLVDCHCHLSAPDFD--RDLDDVLEKAKKANVVALVAVA-EH---SGEFEKIMQLSERYNGFVLPCLGVHPVQGLPPEDQ 78 (272)
T ss_dssp CEEEEEECTTSGGGT--TTHHHHHHHHHHTTEEEEEECC-SS---GGGHHHHHHHHHHTTTTEEEEECCCSBC-------
T ss_pred cEEEEeeCCCchhhh--cCHHHHHHHHHHCCCCEEEEeC-CC---HHHHHHHHHHHHHCCCCEEEEEEECCCcccccccc
Confidence 599999999765322 3466677888999999999885 21 1223333333222211112223333221 111
Q ss_pred ---CccchHHHHHHHH---cCCcEEEEe-cccCCCC-C---CCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhh
Q 013050 118 ---NAYNASALEALLN---AGVLGLKSF-MCPSGIN-D---FPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKL 186 (450)
Q Consensus 118 ---~~~~~~~~~~~~~---~g~~~~~~~-~~~~~~~-~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~ 186 (450)
.....+.+.++++ ..+.++... ..+.... . ......+.+++.+++|+++|+||.+|+++..
T Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~~a~-------- 150 (272)
T 2y1h_A 79 RSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAG-------- 150 (272)
T ss_dssp CBCCHHHHHHHHHHHHHHGGGCSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECTTCH--------
T ss_pred ccCCHHHHHHHHHHHHhCCCCEEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCcH--------
Confidence 1123445555543 234444321 2110000 0 0011245788899999999999999996432
Q ss_pred ccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcch
Q 013050 187 EDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHY 266 (450)
Q Consensus 187 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 266 (450)
..+++++++. +..++.+ |+.+ ...+.++++.+.|+.+.. ++..
T Consensus 151 --------------------------~~~~~il~~~------~~~~~v~-H~~~--g~~~~~~~~~~~g~~i~~--~g~~ 193 (272)
T 2y1h_A 151 --------------------------RPTINLLQEQ------GAEKVLL-HAFD--GRPSVAMEGVRAGYFFSI--PPSI 193 (272)
T ss_dssp --------------------------HHHHHHHHHT------TCCSEEE-ETCC--SCHHHHHHHHHTTCEEEE--CGGG
T ss_pred --------------------------HHHHHHHHhC------CCCCEEE-EccC--CCHHHHHHHHHCCCEEEE--CCcc
Confidence 2344555543 1235555 7765 344666676667754443 3321
Q ss_pred hcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcC--CeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHH
Q 013050 267 LAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG--HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVT 344 (450)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g--~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 344 (450)
. ... .+.+.++.. -.+.++||. |...... |.......+...
T Consensus 194 ~--------------------~~~----~~~~~~~~~~~drll~eTD~-P~~~p~~------------g~~~~p~~l~~~ 236 (272)
T 2y1h_A 194 I--------------------RSG----QKQKLVKQLPLTSICLETDS-PALGPEK------------QVRNEPWNISIS 236 (272)
T ss_dssp G--------------------TCH----HHHHHHHHSCGGGEEECCCT-TSSCSST------------TSCCCGGGHHHH
T ss_pred c--------------------CcH----HHHHHHHhCCHHHEEEecCC-CCCCCCC------------CCcCcHHHHHHH
Confidence 0 011 122222222 235899995 3211100 100111123333
Q ss_pred HHHH-HhcCCCHHHHHHHHhhchhHHhCC
Q 013050 345 WSYG-RKYGVTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 345 ~~~~-~~~gls~~~al~~aT~~~A~~lg~ 372 (450)
...+ ...|+|.+++.++.|.|++++|++
T Consensus 237 ~~~la~~~g~~~e~~~~~~~~N~~~l~~~ 265 (272)
T 2y1h_A 237 AEYIAQVKGISVEEVIEVTTQNALKLFPK 265 (272)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHHHHh
Confidence 3333 346999999999999999999998
No 71
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=99.02 E-value=2.5e-08 Score=90.09 Aligned_cols=250 Identities=16% Similarity=0.103 Sum_probs=135.7
Q ss_pred ceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhc--C----CceEEEEeccccC
Q 013050 43 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK--R----IYVDVGFWGGLVP 116 (450)
Q Consensus 43 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~ 116 (450)
|||+|+|+....+. ++.......+..+||..++..+ ..........+.+.. . ....++.++....
T Consensus 3 ~iD~H~HL~~~~~~--~d~~~vl~~a~~~gV~~~v~~g-------~~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~ 73 (287)
T 3rcm_A 3 LIDIGVNLTNSSFH--DQQAAIVERALEAGVTQMLLTG-------TSLAVSEQALELCQQLDASGAHLFATAGVHPHDAK 73 (287)
T ss_dssp EEEEEECTTCGGGT--TCHHHHHHHHHHTTEEEEEECC-------CSHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGG
T ss_pred eEEEeecCCchhcc--cCHHHHHHHHHHcCCeEEEEec-------CCHHHHHHHHHHHHhCCCCCceEEEEEEECcCccc
Confidence 89999999865432 4577788899999999998775 123333333333221 1 2233333332222
Q ss_pred -CCccchHHHHHHHHc-CCcEEEEe-cccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCc
Q 013050 117 -ENAYNASALEALLNA-GVLGLKSF-MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDT 193 (450)
Q Consensus 117 -~~~~~~~~~~~~~~~-g~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~ 193 (450)
......+.+.++++. .+.++... +.+...........+.+++.+++|+++++||.+|+++..
T Consensus 74 ~~~~~~~~~l~~l~~~~~vvaIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r~a~--------------- 138 (287)
T 3rcm_A 74 AWDTDSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERDAS--------------- 138 (287)
T ss_dssp GCCTTHHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCH---------------
T ss_pred cCCHHHHHHHHHHhcCCCeEEEEEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcCCcH---------------
Confidence 123446677777653 34444322 222110000112356788999999999999999996532
Q ss_pred cccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccc
Q 013050 194 RSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEE 273 (450)
Q Consensus 194 ~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 273 (450)
..+++++++.... ..+. +.|+.+ .+.+.++++.+.|..+.. +.... ..
T Consensus 139 -------------------~~~l~il~~~~~~----~~~~-V~H~fs--G~~e~a~~~l~~G~yis~--~g~i~-~~--- 186 (287)
T 3rcm_A 139 -------------------ERLLAILKDYRDH----LTGA-VVHCFT--GEREALFAYLDLDLHIGI--TGWIC-DE--- 186 (287)
T ss_dssp -------------------HHHHHHHHTTGGG----CSCE-EECSCC--CCHHHHHHHHHTTCEEEE--CGGGG-CT---
T ss_pred -------------------HHHHHHHHHcCCC----CCeE-EEEeCC--CCHHHHHHHHHCCcEEEE--Cchhc-cc---
Confidence 4556666643110 1123 358765 556677777777765554 32111 00
Q ss_pred cCCCCCceEEcCCCCChhhHHHHHHHHhcC--CeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHH-Hh
Q 013050 274 IPDGDTRFKCAPPIRDAANKEKLWEALMDG--HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RK 350 (450)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g--~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~ 350 (450)
-+... +.+.++.- -.+.+.||. |....... .....|-..-...+......+ ..
T Consensus 187 -------------k~~~~----l~~~v~~ip~drlLlETD~-P~l~p~~~------~~~~rg~~n~P~~l~~v~~~lA~~ 242 (287)
T 3rcm_A 187 -------------RRGTH----LHPLVGNIPEGRLMLESDA-PYLLPRSL------RPKPKSGRNEPAFLPEVLREVALH 242 (287)
T ss_dssp -------------TTCGG----GHHHHTTSCTTSEEECCCT-TSCCCTTC------SSCCTTCCCCGGGHHHHHHHHHHH
T ss_pred -------------cCHHH----HHHHHHhcCCccEEEeccC-CccCcccc------ccccCCCcCCHHHHHHHHHHHHHH
Confidence 00011 11222221 236799994 43221110 000012222223355555554 45
Q ss_pred cCCCHHHHHHHHhhchhHHhCC
Q 013050 351 YGVTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 351 ~gls~~~al~~aT~~~A~~lg~ 372 (450)
.|+|.+++.++.|.|+.+++++
T Consensus 243 ~g~s~eev~~~~~~N~~rlf~l 264 (287)
T 3rcm_A 243 RGESAEHTAAHTTATARDFFQL 264 (287)
T ss_dssp HTSCHHHHHHHHHHHHHHHTTC
T ss_pred hCcCHHHHHHHHHHHHHHHHCC
Confidence 6999999999999999999998
No 72
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=98.98 E-value=3.5e-08 Score=91.27 Aligned_cols=264 Identities=17% Similarity=0.181 Sum_probs=129.2
Q ss_pred cceeeccccCCCCCCc-------c---cchHHH---HHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEE
Q 013050 42 GLIDVHAHLDDPGRTE-------W---EGFPSG---TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV 108 (450)
Q Consensus 42 G~iD~H~H~~~~~~~~-------~---~~~~~~---~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (450)
||||+|+|+....... | ++.... ...+.++|+|++++.+ .. ........+....+..........
T Consensus 17 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iv~~~-~~-~~~~~~~~~~~~~~~~~~~v~~~~ 94 (314)
T 2vc7_A 17 GFTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPT-VM-GLGRDIRFMEKVVKATGINLVAGT 94 (314)
T ss_dssp CSEESSCBSCBCCHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECC-CB-TTTCCHHHHHHHHHHHCCEEEECE
T ss_pred CCcccccccccCcchhcccCcchhhhcccHHHHHHHHHHHHHcCCCEEEecC-CC-CCCcCHHHHHHHHHHcCCeEEEEe
Confidence 9999999997532111 1 112222 3677899999999885 22 112224444333333211111222
Q ss_pred EEecccc-CCC--ccchHHHHHHHH----cCC--cEE-----EEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEec
Q 013050 109 GFWGGLV-PEN--AYNASALEALLN----AGV--LGL-----KSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 174 (450)
Q Consensus 109 ~~~~~~~-~~~--~~~~~~~~~~~~----~g~--~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 174 (450)
+.+.... ... ....+.+.+++. .|+ .++ +....+. .......+.+++.+++|+++|++|.+|.
T Consensus 95 G~hp~~~~~~~~~~~~~~~l~~~~~~~~~~gige~G~~~g~i~~~ld~~---~~~~~q~~~~~~~~~lA~~~~~pv~iH~ 171 (314)
T 2vc7_A 95 GIYIYIDLPFYFLNRSIDEIADLFIHDIKEGIQGTLNKAGFVKIAADEP---GITKDVEKVIRAAAIANKETKVPIITHS 171 (314)
T ss_dssp EBCCSSCCCGGGTTCCHHHHHHHHHHHHHTCSSSSSCCCCSEEEECCTT---CSCHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred ecCCCCCCchhhhccCHHHHHHHHHHHHHhhcccCCCCCCeEEEeecCC---CCCHHHHHHHHHHHHHHHHHCCEEEEeC
Confidence 2222111 001 122444544432 222 221 1112221 1111223457778899999999999999
Q ss_pred CC--hhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHH
Q 013050 175 EM--EKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAK 252 (450)
Q Consensus 175 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 252 (450)
.. .. ..++++++++. + ....++.+.|+... .+.+.++++.
T Consensus 172 ~~~~~~---------------------------------~~~~~~~l~~~--~--~~~~~~~i~H~~~~-~~~~~~~~~~ 213 (314)
T 2vc7_A 172 NAHNNT---------------------------------GLEQQRILTEE--G--VDPGKILIGHLGDT-DNIDYIKKIA 213 (314)
T ss_dssp CTTTTH---------------------------------HHHHHHHHHHT--T--CCGGGEEETTGGGC-CCHHHHHHHH
T ss_pred CCcccC---------------------------------hHHHHHHHHHc--C--CCcccEEEECCCCC-CCHHHHHHHH
Confidence 41 11 12444555543 0 11235667888753 3457777877
Q ss_pred hCCCcEEEecCcchhcccccccCCCCCceEEcCCCCC-hhhHHHHHHHHhcC--CeeEEcCCCCCCChhhhcccCCCccc
Q 013050 253 TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRD-AANKEKLWEALMDG--HIDMLSSDHSPTVPELKLLDEGNFLK 329 (450)
Q Consensus 253 ~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~g--~~~~~gtD~~~~~~~~~~~~~~~~~~ 329 (450)
+.|..+....+.. . + ... ....+.+.+.+..| -.++++||.. ..+.... ..++.
T Consensus 214 ~~G~~i~~~~~~~-~--~----------------~~~~~~~~~~i~~~~~~g~~drilleTD~~-~~~~~~~--~~p~~- 270 (314)
T 2vc7_A 214 DKGSFIGLDRYGL-D--L----------------FLPVDKRNETTLRLIKDGYSDKIMISHDYC-CTIDWGT--AKPEY- 270 (314)
T ss_dssp HTTCEEEECCTTC-T--T----------------TSCHHHHHHHHHHHHHTTCTTTEEECCCCB-SSBCCGG--GCTTS-
T ss_pred HcCCEEEEeCCCc-c--c----------------CCCHHHHHHHHHHHHHcCCCCeEEEcCCcc-ccccccc--cchhh-
Confidence 7886555532110 0 0 001 12334455555653 3468999963 1110000 00000
Q ss_pred cCCCCc--chhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhC
Q 013050 330 AWGGIS--SLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAG 371 (450)
Q Consensus 330 ~~~g~~--~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg 371 (450)
.+.|.. +....+......+...|++.+++.++.|.|++++|+
T Consensus 271 ~~~g~~~~~~~~~~~~~~~~l~~~g~~~e~~~~~~~~N~~rlf~ 314 (314)
T 2vc7_A 271 KPKLAPRWSITLIFEDTIPFLKRNGVNEEVIATIFKENPKKFFS 314 (314)
T ss_dssp HHHHCTTCSTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHTC
T ss_pred hhcCCCCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHCHHHHhC
Confidence 000111 112223334444556799999999999999999885
No 73
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=98.94 E-value=1.1e-07 Score=85.58 Aligned_cols=241 Identities=19% Similarity=0.222 Sum_probs=128.3
Q ss_pred ceeeccccCCCCCCc-ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCc--
Q 013050 43 LIDVHAHLDDPGRTE-WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA-- 119 (450)
Q Consensus 43 ~iD~H~H~~~~~~~~-~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 119 (450)
+||+|+|+..+.+.. ..+.....+.+.++||+.++..+ . .........+....... +....++.+...
T Consensus 3 ~iD~H~Hl~~~~~~~~~~~~~~~l~~~~~~Gv~~~v~~~--~-----~~~~~~~~~~~~~~~p~--~~~~~g~hP~~~~~ 73 (265)
T 1yix_A 3 LVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVA--T-----TLPSYLHMRDLVGERDN--VVFSCGVHPLNQND 73 (265)
T ss_dssp EEEEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECC--S-----SHHHHHHHHHHHCSCTT--EEEEECCCTTCCSS
T ss_pred EEEEeeCCCchhhcccccCHHHHHHHHHHCCCCEEEEeC--C-----CHHHHHHHHHHHHHCCC--eEEEEEeCCCcccc
Confidence 899999997654311 23466778888999999988764 1 12333333333333222 222223333222
Q ss_pred -cchHHHHHHHHc------CCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCC
Q 013050 120 -YNASALEALLNA------GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLD 192 (450)
Q Consensus 120 -~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~ 192 (450)
...+.+.++++. |..|++.+..+. ......+.+...++.|+++|++|.+|+....
T Consensus 74 ~~~~~~l~~~~~~~~~~~iGe~Gl~~~~~~~----~~~~q~~~~~~~~~~a~~~~~pv~iH~~~~~-------------- 135 (265)
T 1yix_A 74 PYDVEDLRRLAAEEGVVALGETGLDYYYTPE----TKVRQQESFIHHIQIGRELNKPVIVHTRDAR-------------- 135 (265)
T ss_dssp CCCHHHHHHHHTSTTEEEEEEEEEECTTCSS----CHHHHHHHHHHHHHHHHHHTCCEEEEEESCH--------------
T ss_pred cchHHHHHHHhccCCeEEEEccccCCCcCCC----ChHHHHHHHHHHHHHHHHhCCCEEEEecCch--------------
Confidence 135677776653 333444322110 0123356788899999999999999995321
Q ss_pred ccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhccccc
Q 013050 193 TRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAE 272 (450)
Q Consensus 193 ~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 272 (450)
..+++++++.+ .++.++.+ |+.. ...+.++++.+.|+ ++.++.... .
T Consensus 136 --------------------~~~~~~l~~~~----~p~~~~v~-H~~~--~~~~~~~~~~~~g~--~~~~sg~~~-~--- 182 (265)
T 1yix_A 136 --------------------ADTLAILREEK----VTDCGGVL-HCFT--EDRETAGKLLDLGF--YISFSGIVT-F--- 182 (265)
T ss_dssp --------------------HHHHHHHHHTT----GGGTCEEE-TTCC--SCHHHHHHHHTTTC--EEEECGGGG-S---
T ss_pred --------------------HHHHHHHHhcC----CCCCCEEE-EcCC--CCHHHHHHHHHCCc--EEEECCccc-c---
Confidence 23444444420 11344544 8765 33455566655554 444343210 0
Q ss_pred ccCCCCCceEEcCCCCChhhHHHHHHHHhc-C-CeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHh
Q 013050 273 EIPDGDTRFKCAPPIRDAANKEKLWEALMD-G-HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK 350 (450)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g-~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 350 (450)
.... .+.+.++. + -.++++||+ |........ |.......+......+.+
T Consensus 183 ---------------~~~~---~~~~~~~~~~~drll~~TD~-P~~~~~~~~----------g~~~~~~~l~~~~~~l~~ 233 (265)
T 1yix_A 183 ---------------RNAE---QLRDAARYVPLDRLLVETDS-PYLAPVPHR----------GKENQPAMVRDVAEYMAV 233 (265)
T ss_dssp ---------------TTCH---HHHHHHHHSCGGGEEECCCB-TSCCCTTCT----------TSCCCGGGHHHHHHHHHH
T ss_pred ---------------CchH---HHHHHHHhCChHHEEEecCC-CCCCCcccC----------CCCCchHHHHHHHHHHHH
Confidence 0011 12222332 2 246899995 332111100 111111223444444444
Q ss_pred -cCCCHHHHHHHHhhchhHHhCC
Q 013050 351 -YGVTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 351 -~gls~~~al~~aT~~~A~~lg~ 372 (450)
.++|.+++.++.+.|+++++++
T Consensus 234 ~~~~~~~~~~~i~~~Na~rl~~l 256 (265)
T 1yix_A 234 LKGVAVEELAQVTTDNFARLFHI 256 (265)
T ss_dssp HHTSCHHHHHHHHHHHHHHHTTC
T ss_pred HhCcCHHHHHHHHHHHHHHHhCc
Confidence 6899999999999999999998
No 74
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.88 E-value=3.2e-07 Score=82.47 Aligned_cols=248 Identities=14% Similarity=0.071 Sum_probs=126.9
Q ss_pred ceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCC----
Q 013050 43 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN---- 118 (450)
Q Consensus 43 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 118 (450)
+||+|+|+....+. .+.....+.+.++||++++..+ . .........+.......+ ....++.+..
T Consensus 5 ~iD~H~Hl~~~~~~--~~~~~~l~~~~~~Gv~~~v~~~-~------~~~~~~~~~~l~~~~~~i--~~~~G~hP~~~~~~ 73 (264)
T 1xwy_A 5 MFDIGVNLTSSQFA--KDRDDVVACAFDAGVNGLLITG-T------NLRESQQAQKLARQYSSC--WSTAGVHPHDSSQW 73 (264)
T ss_dssp CEEEEECTTSGGGT--TTHHHHHHHHHHTTCCEEEECC-C------SHHHHHHHHHHHHHSTTE--EEEECCCGGGGGGC
T ss_pred EEEEeeCCCChhhc--cCHHHHHHHHHHCCCCEEEEeC-C------CHHHHHHHHHHHHhCCCE--EEEEEECCcccccC
Confidence 89999999765322 3466677788999999998875 1 123333333333322222 1122222221
Q ss_pred -ccchHHHHHHHHc-CCcEEEEe-cccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccc
Q 013050 119 -AYNASALEALLNA-GVLGLKSF-MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS 195 (450)
Q Consensus 119 -~~~~~~~~~~~~~-g~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 195 (450)
....+.+.++++. ++.++... +.+...........+.+++.++.|+++|+||.+|+.+..
T Consensus 74 ~~~~~~~l~~~~~~~~~~~iGE~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~~a~----------------- 136 (264)
T 1xwy_A 74 QAATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDAH----------------- 136 (264)
T ss_dssp CHHHHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCH-----------------
T ss_pred CHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEcCCch-----------------
Confidence 1234556666553 33333221 111100000011224588899999999999999995321
Q ss_pred cccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccC
Q 013050 196 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP 275 (450)
Q Consensus 196 ~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~ 275 (450)
..+++++++... +..++. .|+.+ ...+.++++.+.|+.+.. +.. ..
T Consensus 137 -----------------~~~~~il~~~~~----~~~~~v-~H~~~--g~~~~~~~~~~~g~yi~~--~g~-~~------- 182 (264)
T 1xwy_A 137 -----------------ERFMTLLEPWLD----KLPGAV-LHCFT--GTREEMQACVAHGIYIGI--TGW-VC------- 182 (264)
T ss_dssp -----------------HHHHHHHGGGGG----GSSCEE-ECSCC--CCHHHHHHHHHTTCEEEE--CGG-GG-------
T ss_pred -----------------HHHHHHHHhcCC----CCCcEE-EEccC--CCHHHHHHHHHCCeEEEE--Ccc-cc-------
Confidence 344555554310 023444 38765 345566666666654443 321 10
Q ss_pred CCCCceEEcCCCCChhhHHHHHHHHhcCC--eeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHH-HhcC
Q 013050 276 DGDTRFKCAPPIRDAANKEKLWEALMDGH--IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYG 352 (450)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~--~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g 352 (450)
.... ...+.+.++... .++++||+ |......+.+ .+ .++... ...+......+ ...|
T Consensus 183 ----------~~~~---~~~l~~~~~~~~~drll~eTD~-P~~~~~~~~~--~~---~g~~n~-p~~~~~~~~~~a~~~g 242 (264)
T 1xwy_A 183 ----------DERR---GLELRELLPLIPAEKLLIETDA-PYLLPRDLTP--KP---SSRRNE-PAHLPHILQRIAHWRG 242 (264)
T ss_dssp ----------CTTT---SHHHHHHGGGSCGGGEEECCCT-TSCCCTTCTT--CC---CSSCCC-GGGHHHHHHHHHHHHT
T ss_pred ----------CCcC---cHHHHHHHHhCCHHHEEEecCC-CCcCcccccc--cc---CCCCCc-hHHHHHHHHHHHHHHC
Confidence 0000 112333344322 46899995 4321110000 00 001111 12233444443 4568
Q ss_pred CCHHHHHHHHhhchhHHhCC
Q 013050 353 VTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 353 ls~~~al~~aT~~~A~~lg~ 372 (450)
+|.+++.++.+.|+++++++
T Consensus 243 ~~~e~~~~~~~~Na~rl~~l 262 (264)
T 1xwy_A 243 EDAAWLAATTDANVKTLFGI 262 (264)
T ss_dssp CCHHHHHHHHHHHHHHHHCC
T ss_pred cCHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999987
No 75
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=98.83 E-value=1.9e-07 Score=85.51 Aligned_cols=258 Identities=14% Similarity=0.040 Sum_probs=130.2
Q ss_pred cceeeccccCCCCCCc--------ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEecc
Q 013050 42 GLIDVHAHLDDPGRTE--------WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG 113 (450)
Q Consensus 42 G~iD~H~H~~~~~~~~--------~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (450)
.+||+|+|+..+.+.. .++.......+.++||++++..+ ..........+....... +....+
T Consensus 2 ~~iD~H~Hl~~~~~~~~~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~-------~~~~~~~~~~~la~~~~~--v~~~~G 72 (301)
T 2xio_A 2 KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITG-------GNLQDSKDALHLAQTNGM--FFSTVG 72 (301)
T ss_dssp CEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECC-------CSHHHHHHHHHHHTTCTT--EEEEEC
T ss_pred eEEEEcCCCCChHhcccccccccCccCHHHHHHHHHHCCCCEEEEeC-------CCHHHHHHHHHHHHHCCC--EEEEEE
Confidence 4899999998654321 13567778888999999999875 123344444444433222 222233
Q ss_pred ccCCCc---------cchHHHHHHHHc---CCcEEEEe-cccCCCC-CCCCCCHHHHHHHHHHHHhcCCcEEEecCChhh
Q 013050 114 LVPENA---------YNASALEALLNA---GVLGLKSF-MCPSGIN-DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG 179 (450)
Q Consensus 114 ~~~~~~---------~~~~~~~~~~~~---g~~~~~~~-~~~~~~~-~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~ 179 (450)
+.+... ...+.+.++++. .+.++... ..+...+ .......+.+++.+++|+++|+||.+|+++..
T Consensus 73 iHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r~a~- 151 (301)
T 2xio_A 73 CHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSH- 151 (301)
T ss_dssp CCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTEEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEESCH-
T ss_pred ECcChhhhCcccccHHHHHHHHHHHhcCCCCeEEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecCch-
Confidence 333322 224556666553 33343221 2111000 00012236788899999999999999995422
Q ss_pred hhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEE
Q 013050 180 SERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSIT 259 (450)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~ 259 (450)
..+++++++... ...++ +.|+.+ .+.+.++++.+.|+.+.
T Consensus 152 ---------------------------------~~~~~il~~~~~----~~~~~-i~H~f~--g~~~~~~~~l~~g~yi~ 191 (301)
T 2xio_A 152 ---------------------------------AEFLDITKRNRD----RCVGG-VVHSFD--GTKEAAAALIDLDLYIG 191 (301)
T ss_dssp ---------------------------------HHHHHHHHHTGG----GSSCE-EETTCC--CCHHHHHHHHHTTCEEE
T ss_pred ---------------------------------HHHHHHHHhccC----CCCcE-EEEccC--CCHHHHHHHHhcCcEEE
Confidence 344455544210 01233 478765 45566677667775444
Q ss_pred EecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCC--eeEEcCCCCCCChhhh------ccc------CC
Q 013050 260 VETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH--IDMLSSDHSPTVPELK------LLD------EG 325 (450)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~--~~~~gtD~~~~~~~~~------~~~------~~ 325 (450)
. +.. . ++.... .+.++... .+.++||. |.....+ .+. ..
T Consensus 192 ~--~g~-~-------------------~~~~~~----~~~~~~~p~drlLleTD~-P~~~~~~~~~~~~~l~~~~p~~~~ 244 (301)
T 2xio_A 192 F--NGC-S-------------------LKTEAN----LEVLKSIPSEKLMIETDA-PWCGVKSTHAGSKYIRTAFPTKKK 244 (301)
T ss_dssp E--CGG-G-------------------SSSHHH----HHHHHTSCGGGEEECCCT-TSCCCCTTSTTGGGCCCCCCEESS
T ss_pred E--ccc-c-------------------cCChHH----HHHHHhCChHHEEEecCC-CcccccccccccccccccCccccc
Confidence 4 221 0 001111 13333322 35899995 4321000 000 00
Q ss_pred Ccccc-CCCCcchhhHHHHHHHHHHh-cCCCHHHHHHHHhhchhHHhCCCCCCc
Q 013050 326 NFLKA-WGGISSLQFVLPVTWSYGRK-YGVTLEQLASWWSERPAKLAGQVSKGA 377 (450)
Q Consensus 326 ~~~~~-~~g~~~~~~~~~~~~~~~~~-~gls~~~al~~aT~~~A~~lg~~~~G~ 377 (450)
.+-.. ..+.... ..+......+.+ .|+|.+++.+..+.|+.++++++..|.
T Consensus 245 ~~~g~~~~~~n~p-~~v~~~~~~ia~l~g~~~e~~~~~~~~Na~rlf~~~~~~~ 297 (301)
T 2xio_A 245 WESGHCLKDRNEP-CHIIQILEIMSAVRDEDPLELANTLYNNTIKVFFPVIAEN 297 (301)
T ss_dssp CCTTSEETTCCCG-GGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHCCC----
T ss_pred ccccccCCCCCCh-HHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhCchhhhh
Confidence 00000 0011111 223333333333 589999999999999999999843554
No 76
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=98.78 E-value=3.6e-07 Score=83.47 Aligned_cols=255 Identities=13% Similarity=0.068 Sum_probs=137.3
Q ss_pred cceeeccccCCCCCC--------cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhc----CCceEEE
Q 013050 42 GLIDVHAHLDDPGRT--------EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK----RIYVDVG 109 (450)
Q Consensus 42 G~iD~H~H~~~~~~~--------~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 109 (450)
-|||+|+|+..+.+. ..+++......+.++||..++..+ .. ..+........+.... .....++
T Consensus 27 ~~iDtH~HL~~~~f~g~y~gk~~h~~d~~~vl~rA~~aGV~~ii~~g-~~---~~~~~~~~~La~~~~~~~~~~v~~~~G 102 (325)
T 3ipw_A 27 QFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITS-GC---LNDFKKAIEIINKYQNLTNIKLVTTIG 102 (325)
T ss_dssp CEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECC-CS---HHHHHHHHHHHHHHGGGCSSEEEEEEC
T ss_pred CeEEEEECCCchHhccccccccccccCHHHHHHHHHHcCCcEEEEcc-CC---HHHHHHHHHHHHHCCCcccceEEEEEE
Confidence 599999999876541 135678888899999999998875 11 1222222222232221 1222333
Q ss_pred EeccccCC-Ccc-chHHHHHHHHc---CCcEEEEe-cccCCCC-CCCCCCHHHHHHHHHHHHh-cCCcEEEecCChhhhh
Q 013050 110 FWGGLVPE-NAY-NASALEALLNA---GVLGLKSF-MCPSGIN-DFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKGSE 181 (450)
Q Consensus 110 ~~~~~~~~-~~~-~~~~~~~~~~~---g~~~~~~~-~~~~~~~-~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~~~ 181 (450)
.++..... ..+ .++.+.++++. .+.++... .++...+ .......+.+++.+++|++ +++||.+|.++..
T Consensus 103 iHP~~~~~~~~~~~l~~L~~l~~~~~~~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r~A~--- 179 (325)
T 3ipw_A 103 VHPTRTNELKQEGYLDELLLLCEKNIDKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCRKSW--- 179 (325)
T ss_dssp CCGGGGGGGGSTTHHHHHHHHHHHTGGGEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEESCH---
T ss_pred ECcchhhcCCchHHHHHHHHHHhcCCCCEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeCchH---
Confidence 33322221 122 46677777653 34444221 2221000 0011234678889999999 9999999996542
Q ss_pred hhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEe
Q 013050 182 RHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVE 261 (450)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~ 261 (450)
+.+++++++.... ..+. +.|+.+ .+.+.++++.+.|..++..
T Consensus 180 -------------------------------~d~l~iL~~~~~~----~~~g-ViH~Fs--Gs~e~a~~~l~lG~yis~~ 221 (325)
T 3ipw_A 180 -------------------------------SDLCQLNKELGYN----GCKG-VVHCFD--GTEEEMNQILNEGWDIGVT 221 (325)
T ss_dssp -------------------------------HHHHHHHHHTTCT----TSCE-EECSCC--CCHHHHHHHHHTTCEEEEC
T ss_pred -------------------------------HHHHHHHHhcCCC----CCcE-EEEECC--CCHHHHHHHHhcCcEEeeC
Confidence 4566666654111 1223 458887 6777788877888665553
Q ss_pred cCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcC--CeeEEcCCCCCCChhhhc------------------
Q 013050 262 TCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG--HIDMLSSDHSPTVPELKL------------------ 321 (450)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g--~~~~~gtD~~~~~~~~~~------------------ 321 (450)
.+ . + +.... + +.++.- -.+.+.||+ |+......
T Consensus 222 G~---~-~------------------k~~~~---~-~~v~~iPldrlLlETDa-P~l~~~~~~~~~~~~~~p~p~r~~~k 274 (325)
T 3ipw_A 222 GN---S-L------------------QSIEL---L-NVMKQIPIERLHIETDC-PYCGIKKTSAGFKYLKEKDFGVKVEK 274 (325)
T ss_dssp SG---G-G------------------SSHHH---H-HHHTTSCGGGEEECCCT-TSCCCCTTSGGGGGCSSCCCCBCGGG
T ss_pred cc---c-c------------------CcHHH---H-HHHHhCCcccEEEeCCC-ccccccccccchhcccccCccccccc
Confidence 21 1 0 11111 1 222221 125799994 44211000
Q ss_pred ccCCCccccCCCCcchhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHHhCC
Q 013050 322 LDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 322 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~gls~~~al~~aT~~~A~~lg~ 372 (450)
...+.+. ++. .-...+....+.+ .-.|++++++.+..+.|.-+++++
T Consensus 275 ~~~~~~~---g~r-NeP~~v~~v~~~iA~l~g~~~eeva~~t~~Na~~lF~~ 322 (325)
T 3ipw_A 275 YQRNKYV---QRR-NEPSNIIDIAIIMSSIKHISLFEFVNKVYSNSMNMYFP 322 (325)
T ss_dssp CCTTSCB---TTC-CCGGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHSC
T ss_pred ccccccc---CCc-CcHHHHHHHHHHHHHhhCcCHHHHHHHHHHHHHHHhCc
Confidence 0000000 111 1122344444443 456899999999999999999987
No 77
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=98.78 E-value=1.7e-07 Score=82.79 Aligned_cols=236 Identities=18% Similarity=0.130 Sum_probs=126.7
Q ss_pred ceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCC----C
Q 013050 43 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE----N 118 (450)
Q Consensus 43 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 118 (450)
|||+|+|+... ++.......+.+.||..+.. + +. ........+.+.... ++....++.+. .
T Consensus 3 liDtH~HL~~~-----~d~~~vl~~a~~~gV~~i~v-~--~~-----~~~~~~~~~la~~~~--~v~~~~GiHP~~~~~~ 67 (254)
T 3gg7_A 3 LIDFHVHLDLY-----PDPVAVARACEERQLTVLSV-T--TT-----PAAWRGTLALAAGRP--HVWTALGFHPEVVSER 67 (254)
T ss_dssp CEEEEECGGGS-----SSHHHHHHHHHHTTCEEEEC-C--SS-----GGGHHHHHGGGTTCT--TEEECBCCCGGGTTTT
T ss_pred eEEEeeCCCCC-----CCHHHHHHHHHHCCCcEEEe-c--CC-----HHHHHHHHHHHHhCC--CeEEEEeeCccccccc
Confidence 89999999753 24667788889999997653 3 11 222233333332221 22333333332 2
Q ss_pred ccchHHHHHHHHcCCcEEEEe-cccCCCC-CCCCCCHHHHHHHHHHHHhcCCcEE-EecCChhhhhhhhhhccCcCCccc
Q 013050 119 AYNASALEALLNAGVLGLKSF-MCPSGIN-DFPMTNASHIKEGLSVLARYKRPLL-VHAEMEKGSERHVKLEDDTLDTRS 195 (450)
Q Consensus 119 ~~~~~~~~~~~~~g~~~~~~~-~~~~~~~-~~~~~~~~~l~~~~~~a~~~g~~v~-~H~~~~~~~~~~~~~~~~~~~~~~ 195 (450)
...++.+.+++.. +.++... ..+.... .......+.+++.+++|+++++||. +|+++..
T Consensus 68 ~~~l~~l~~~~~~-~vaIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r~a~----------------- 129 (254)
T 3gg7_A 68 AADLPWFDRYLPE-TRFVGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRRAE----------------- 129 (254)
T ss_dssp GGGTHHHHHHGGG-CSEEEEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECTTCH-----------------
T ss_pred HHHHHHHHHHhhh-ccEEEEEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcCCcH-----------------
Confidence 2445666666642 3333221 1111000 0011234568889999999999998 9996532
Q ss_pred cccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccC
Q 013050 196 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP 275 (450)
Q Consensus 196 ~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~ 275 (450)
+.+++++++.. ...++ +.|+.+ .+.+.++++.+.|..++. +....
T Consensus 130 -----------------~~~~~il~~~~-----~~~~~-v~H~fs--G~~e~a~~~l~~G~yis~--~g~~~-------- 174 (254)
T 3gg7_A 130 -----------------SEVLNCLEANP-----RSGTP-ILHWYS--GSVTELRRAISLGCWFSV--GPTMV-------- 174 (254)
T ss_dssp -----------------HHHHHHHHHCG-----GGEEE-EEETCC--SCHHHHHHHHHTTCEEEE--CHHHH--------
T ss_pred -----------------HHHHHHHHHcC-----CCCcE-EEEeCC--CCHHHHHHHHcCCcEEEE--CcccC--------
Confidence 35556666530 01123 458876 566777777777765544 32110
Q ss_pred CCCCceEEcCCCCChhhHHHHHHHHhcC--CeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHH-HhcC
Q 013050 276 DGDTRFKCAPPIRDAANKEKLWEALMDG--HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYG 352 (450)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g--~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g 352 (450)
+... +.+.++.- -.+.+.||+ |..+.. |...-...+......+ .-.|
T Consensus 175 ------------~~~~----~~~~v~~ip~drlLlETD~-P~~~~r-------------g~~n~P~~v~~v~~~iA~~~g 224 (254)
T 3gg7_A 175 ------------RTQK----GAALIRSMPRDRVLTETDG-PFLELD-------------GQAALPWDVKSVVEGLSKIWQ 224 (254)
T ss_dssp ------------TSHH----HHHHHHHSCGGGEEECCCT-TTSEET-------------TEECCGGGHHHHHHHHHHHHT
T ss_pred ------------chHH----HHHHHHHcCCCeEEEeCCC-CccccC-------------CCCCCHHHHHHHHHHHHHHhC
Confidence 0111 12222221 136799994 543211 1111122344444443 4568
Q ss_pred CCHHHHHHHHhhchhHHhCCCCCC
Q 013050 353 VTLEQLASWWSERPAKLAGQVSKG 376 (450)
Q Consensus 353 ls~~~al~~aT~~~A~~lg~~~~G 376 (450)
+|.+++.+..+.|+.++++++.-|
T Consensus 225 ~~~ee~~~~~~~N~~~lf~~~~~~ 248 (254)
T 3gg7_A 225 IPASEVERIVKENVSRLLGTVREG 248 (254)
T ss_dssp SCHHHHHHHHHHHHHHHHHC----
T ss_pred cCHHHHHHHHHHHHHHHHCCCccc
Confidence 999999999999999999984333
No 78
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=98.69 E-value=7.2e-07 Score=80.25 Aligned_cols=241 Identities=15% Similarity=0.120 Sum_probs=127.0
Q ss_pred ceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCC----
Q 013050 43 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN---- 118 (450)
Q Consensus 43 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 118 (450)
++|+|+|+....+. .+.......+.++||+.++..+ . .........+....... +....++.+..
T Consensus 13 ~~~~~~hl~~~~~~--~~~~~~l~~~~~~GV~~~v~~~-~------~~~~~~~~~~l~~~~p~--i~~~~G~hP~~~~~~ 81 (268)
T 1j6o_A 13 MVDTHAHLHFHQFD--DDRNAVISSFEENNIEFVVNVG-V------NLEDSKKSLDLSKTSDR--IFCSVGVHPHDAKEV 81 (268)
T ss_dssp EEEEEECTTSGGGT--TTHHHHHHTTTTTTEEEEEEEC-S------SHHHHHHHHHHHTTCTT--EEEEECCCGGGGGGC
T ss_pred ccccccCCCChhhc--cCHHHHHHHHHHcCCCEEEEeC-C------CHHHHHHHHHHHHHCCC--EEEEEeecccccccc
Confidence 68999999875432 3466777888899999988774 1 12333333333333222 22222233322
Q ss_pred -ccchHHHHHHHHc------CCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcC
Q 013050 119 -AYNASALEALLNA------GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTL 191 (450)
Q Consensus 119 -~~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~ 191 (450)
....+.+.++++. |..|+..+.... ......+.+...++.|.++|++|.+|+...
T Consensus 82 ~~~~~~~l~~~~~~~~~~~iGe~Gld~~~~~~----~~~~q~~~f~~~~~~a~~~~lPv~iH~~~~-------------- 143 (268)
T 1j6o_A 82 PEDFIEHLEKFAKDEKVVAIGETGLDFFRNIS----PAEVQKRVFVEQIELAGKLNLPLVVHIRDA-------------- 143 (268)
T ss_dssp CTTHHHHHHHHTTSTTEEEEEEEEEETTTCSS----CHHHHHHHHHHHHHHHHHHTCCEEEEEESC--------------
T ss_pred CHHHHHHHHHHhccCCEEEEEccccCCcccCC----ChHHHHHHHHHHHHHHHHhCCCEEEEeCch--------------
Confidence 1234555555542 223333322100 012345678899999999999999999532
Q ss_pred CccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccc
Q 013050 192 DTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSA 271 (450)
Q Consensus 192 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~ 271 (450)
...+++++++. |....++.+ |+.+ ...+.++++.+.| ++++++.... .
T Consensus 144 --------------------~~~~~~il~~~----p~~~~~~I~-H~~~--g~~~~~~~~~~~g--~y~~~sg~~~-~-- 191 (268)
T 1j6o_A 144 --------------------YSEAYEILRTE----SLPEKRGVI-HAFS--SDYEWAKKFIDLG--FLLGIGGPVT-Y-- 191 (268)
T ss_dssp --------------------HHHHHHHHHHS----CCCSSCEEE-TTCC--SCHHHHHHHHHHT--EEEEECGGGG-C--
T ss_pred --------------------HHHHHHHHHhc----CCCCCCEEE-EcCC--CCHHHHHHHHHCC--CeEEeccccc-c--
Confidence 13445555543 111455655 8765 3344555554444 4554433211 0
Q ss_pred cccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHh-
Q 013050 272 EEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK- 350 (450)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~- 350 (450)
........+.+... --.++++||+ |........ |.......+......+.+
T Consensus 192 ----------------~~~~~l~~~i~~~~-~driL~eTD~-P~~~~~~~~----------g~~n~p~~~~~~~~~la~~ 243 (268)
T 1j6o_A 192 ----------------PKNEALREVVKRVG-LEYIVLETDC-PFLPPQPFR----------GKRNEPKYLKYVVETISQV 243 (268)
T ss_dssp ----------------TTCHHHHHHHHHHC-GGGEEECCCB-TSCCCGGGT----------TSCCCGGGHHHHHHHHHHH
T ss_pred ----------------cchHHHHHHHHhCC-hhhEEEecCC-CCCCCcccC----------CCCCchHHHHHHHHHHHHH
Confidence 00111111222221 1246799995 432211100 111111223444444433
Q ss_pred cCCCHHHHHHHHhhchhHHhCC
Q 013050 351 YGVTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 351 ~gls~~~al~~aT~~~A~~lg~ 372 (450)
.++|.++.-+..+.|+.+++++
T Consensus 244 ~~~~~e~~~~i~~~Na~rlf~l 265 (268)
T 1j6o_A 244 LGVPEAKVDEATTENARRIFLE 265 (268)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHS
T ss_pred hCcCHHHHHHHHHHHHHHHhCc
Confidence 6899999999999999999987
No 79
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=98.68 E-value=1.9e-06 Score=80.21 Aligned_cols=279 Identities=14% Similarity=0.095 Sum_probs=146.0
Q ss_pred cceeeccccCCCCC--------C---cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEE
Q 013050 42 GLIDVHAHLDDPGR--------T---EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGF 110 (450)
Q Consensus 42 G~iD~H~H~~~~~~--------~---~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (450)
|++.+|=|+..... . ..+......+.+.+.|++++++.. ....-.....+....+.... ..+++..
T Consensus 21 G~tl~HEHl~~~~~~~~~~~~~~~l~d~~~~~~el~~~~~~G~~tiVd~t--~~~~GRd~~~l~~is~~t~~-~Gv~Iv~ 97 (363)
T 3ovg_A 21 GITDCHDHFIKNGGPEVEEHIDFLMLNVDASIKEFKEFIDRGGSTIVTMD--PPNVGRDVLKTLEIANAVKN-LGGNVIM 97 (363)
T ss_dssp CEEEEEECSCBCSSHHHHHCGGGCBCCHHHHHHHHHHHHHTTEEEEEECC--CTTTTCCHHHHHHHHHHHGG-GTCEEEE
T ss_pred CCceeccceeccCChhhccCCcccccCHHHHHHHHHHHHHhCCCeEEEeC--CCccCCCHHHHHHHHHhccc-CCcEEEE
Confidence 88999999853211 0 111223345567789999999984 22333455555555544321 1234433
Q ss_pred eccccCCC-----cc-----chHHHHHH----HHcCCcE------------E-----EEecccCCCCCCCCCCHHHHHHH
Q 013050 111 WGGLVPEN-----AY-----NASALEAL----LNAGVLG------------L-----KSFMCPSGINDFPMTNASHIKEG 159 (450)
Q Consensus 111 ~~~~~~~~-----~~-----~~~~~~~~----~~~g~~~------------~-----~~~~~~~~~~~~~~~~~~~l~~~ 159 (450)
..++.... +. ..+++.++ +..|+.+ + +.-..+. .......+.+++.
T Consensus 98 ~TG~y~~~~~~~~~~~~~~~~~e~l~~~~~~ei~~Gi~~~~~~gp~~~~t~ikaG~ikig~s~~---~~t~~Q~~~f~aq 174 (363)
T 3ovg_A 98 STGFHKAKFYDKYSSWLAVVPTEEIVKMCVAEIEEGMDEYNYNGPVVKRSKAKAGIIKAGTGYG---AIDRLELKALEVA 174 (363)
T ss_dssp EEECCCGGGSCTTTSHHHHSCHHHHHHHHHHHHHTCCBTTTTSSSCCCBCSCCCCEEEEEEEET---BEEHHHHHHHHHH
T ss_pred eCCCCcCcccccCcHhhhcCCHHHHHHHHHHHHHhcccccccccccccCCCccCCEEEEEeCCC---CCCHHHHHHHHHH
Confidence 22221110 11 12233222 2344321 2 2222221 1112344668888
Q ss_pred HHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecC
Q 013050 160 LSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS 239 (450)
Q Consensus 160 ~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~ 239 (450)
+++|++.|+||.+|.+.... +. ..++++++... +..++.+.|+.
T Consensus 175 ~~~A~e~glPViiH~r~gr~-------------------------------a~-d~l~iL~e~g~----~~~~vvi~H~~ 218 (363)
T 3ovg_A 175 ARTSILTGCPILVHTQLGTM-------------------------------AL-EVAKHLIGFGA----NPDKIQISHLN 218 (363)
T ss_dssp HHHHHHHCCCEEEEEETTCS-------------------------------HH-HHHHHHHHHTC----CGGGEEEECGG
T ss_pred HHHHHHhCCEEEEeCCCCCC-------------------------------HH-HHHHHHHhcCC----CCCcEEEEcCC
Confidence 99999999999999953110 12 34455554300 12346667887
Q ss_pred ChhHHHHHHHHHH-hCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCe--eEEcCCCCCCC
Q 013050 240 DASSSLDLLMEAK-TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHI--DMLSSDHSPTV 316 (450)
Q Consensus 240 ~~~~~~~~~~~~~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~--~~~gtD~~~~~ 316 (450)
.. .+.+..+++. +.|..+.......+ ...+ .......+.+.++.+.. +.++||.. ..
T Consensus 219 ~~-~~~~~a~~~l~~~G~yI~f~g~~~~---------------~~~~---~~~ra~~l~~lv~~~p~drILleTDap-~~ 278 (363)
T 3ovg_A 219 KN-PDKYYYEKVIKETGVTLCFDGPDRV---------------KYYP---DSLLAENIKYLVDKGLQKHITLSLDAG-RI 278 (363)
T ss_dssp GS-CCHHHHHHHHHHHCCEEEECCTTCT---------------TTCC---HHHHHHHHHHHHHTTCGGGEEECCCCC-SG
T ss_pred CC-CCHHHHHHHHHHCCcEEEECCeecc---------------ccCC---hhHHHHHHHHHHHhcCCCeEEEeCCCC-CC
Confidence 43 4455556655 66765554321100 0000 11233456666666653 68999954 22
Q ss_pred hhhhcccCCCccccC-CCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCCCCCCccccCCCccEE
Q 013050 317 PELKLLDEGNFLKAW-GGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQVSKGAIAIGNHADLV 387 (450)
Q Consensus 317 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlv 387 (450)
......+ ... .........+......+...|+|.+++.++.|.||+++|+++..+++.+||.-+-|
T Consensus 279 ~~l~~~G-----~~~g~~~n~p~~l~~~~~~~a~~rGis~eei~~it~~Np~rlf~l~~~~~~~~~~~~~~~ 345 (363)
T 3ovg_A 279 LYQRNYG-----LTKGKQTFGLAYLFDRFLPLLKQVGVSKEAIFDILVNNPKRVLAFDEKRNFDPLKVSKEV 345 (363)
T ss_dssp GGSHHHH-----HHTTEECCCTHHHHHTHHHHHHHHTCCHHHHHHHHTHHHHHHTSCCCCCCCCGGGSCHHH
T ss_pred cCCCCCC-----ccCCCCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHCCCCcCccCcccCCHHH
Confidence 1111000 000 00112233233333445677999999999999999999999667999999976543
No 80
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=98.67 E-value=3.6e-06 Score=76.78 Aligned_cols=250 Identities=12% Similarity=0.054 Sum_probs=137.5
Q ss_pred EeccceeeccccCCCCCCc----------ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEE
Q 013050 39 IMPGLIDVHAHLDDPGRTE----------WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV 108 (450)
Q Consensus 39 v~PG~iD~H~H~~~~~~~~----------~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (450)
+=|++||+|+|+....+.+ ..+.......+.+.||..++... ........ ..+....+..... +
T Consensus 23 ~p~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~-~~~~~~~n-~~~~~~~~~~p~r----~ 96 (294)
T 4i6k_A 23 MKMNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQ-PSFLGTNN-QAMLNAIQQYPDR----L 96 (294)
T ss_dssp --CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEEC-CGGGTTCC-HHHHHHHHHSTTT----E
T ss_pred CCCCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEec-Ccccccch-HHHHHHHHHCCCe----E
Confidence 4457899999997654321 13466777888999999988764 11111111 1122222222111 1
Q ss_pred EEeccccCCCccchHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhcc
Q 013050 109 GFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLED 188 (450)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~ 188 (450)
.....+.+.. ..++++++.+.|+.+++...... ..+....+.+...++.++++|++|.+|.+...
T Consensus 97 ~g~~~v~P~~--~~~eL~~l~~~gv~Gi~l~~~~~---~~~~~~~~~~~~~~~~a~~~glpv~iH~~~~~---------- 161 (294)
T 4i6k_A 97 KGIAVVQHTT--TFNELVNLKAQGIVGVRLNLFGL---NLPALNTPDWQKFLRNVESLNWQVELHAPPKY---------- 161 (294)
T ss_dssp EEEECCCTTC--CHHHHHHHHTTTEEEEEEECTTS---CCCCSSSHHHHHHHHHHHHTTCEEEEECCHHH----------
T ss_pred EEEEEeCCcc--cHHHHHHHHHCCCcEEEeccCCC---CCCCcccHHHHHHHHHHHHcCCEEEEeeCcch----------
Confidence 2212232222 34677788888999998654221 11234568899999999999999999995322
Q ss_pred CcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChh-------HHHHHHHHHHhCCCcEEEe
Q 013050 189 DTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS-------SSLDLLMEAKTNGDSITVE 261 (450)
Q Consensus 189 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~-------~~~~~~~~~~~~g~~v~~~ 261 (450)
+..+.+++++ ++ .++.+.|++... ...+.+..+.+. -.+++.
T Consensus 162 -----------------------l~~~~~~l~~------~p-~~~Vi~H~g~p~~~~g~~~~~~~~~~~l~~~-~nv~~k 210 (294)
T 4i6k_A 162 -----------------------LVQLLPQLNE------YS-FDVVIDHFGRVDPVKGIEDPDYQKFLSLLNV-KQHWIK 210 (294)
T ss_dssp -----------------------HHHHHHHHTT------SS-SCEEESGGGCCCTTTCTTCHHHHHHHHHCCT-TTEEEE
T ss_pred -----------------------HHHHHHHHHH------CC-CCEEEECCCCCCCCCCCCCHHHHHHHHHHhC-CCEEEE
Confidence 3455666664 23 678888887520 234444444322 246665
Q ss_pred cCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHh-cCC-eeEEcCCCCCCChhhhcccCCCccccCCCCcchhh
Q 013050 262 TCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALM-DGH-IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQF 339 (450)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~-~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 339 (450)
++..+.... ...........+.+.++ -|. .+++|||+ |..... + ..
T Consensus 211 ~Sg~~~~~~--------------~~~~~~~~~~~l~~~~~~~g~dRll~gSD~-P~~~~~-------------~----~~ 258 (294)
T 4i6k_A 211 VSGFYRLGA--------------TPSNINIAQQAYNIFKEKGFLHKLIWGSDW-PHTQHE-------------S----LI 258 (294)
T ss_dssp CCCGGGSSS--------------TTHHHHHHHHHHHHHHHHTCGGGEECCCCB-TCTTCT-------------T----TC
T ss_pred ecccccccc--------------cCCCchhhHHHHHHHHHHhCcccEEEeCCC-CCCCCc-------------C----CC
Confidence 543221100 00000111223333333 232 46799994 442211 0 00
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 013050 340 VLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 340 ~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg~ 372 (450)
.+...++.+.+.++|.++.-+..+.|+++++++
T Consensus 259 ~y~~~~~~l~~~~~~~~~~~~i~~~NA~rl~~l 291 (294)
T 4i6k_A 259 TYEDAIKAFKQIVFDKHEQCLILNQNPTELFGF 291 (294)
T ss_dssp CHHHHHHHHHHHCCCHHHHHHHHTHHHHHHHTC
T ss_pred CHHHHHHHHHHHCCCHHHHHHHHHHCHHHHhCC
Confidence 122233445555799999999999999999998
No 81
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=98.66 E-value=2.5e-06 Score=76.60 Aligned_cols=243 Identities=14% Similarity=0.145 Sum_probs=123.0
Q ss_pred ceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCc---
Q 013050 43 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA--- 119 (450)
Q Consensus 43 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 119 (450)
+||+|+|+....+. .+.....+.+.+.||+.++..+ .. ........+....... +....++.+...
T Consensus 2 ~iD~H~Hl~~~~~~--~~~~~~l~~~~~~Gv~~~v~~~-~~------~~~~~~~~~~~~~~p~--~~~~~g~~P~~~~~~ 70 (265)
T 2gzx_A 2 LIDTHVHLNDEQYD--DDLSEVITRAREAGVDRMFVVG-FN------KSTIERAMKLIDEYDF--LYGIIGWHPVDAIDF 70 (265)
T ss_dssp CEEEEECTTSGGGT--TTHHHHHHHHHHTTCCEEEEEE-CS------HHHHHHHHHHHHHCTT--EEEEECCCGGGGGGC
T ss_pred eEEEeeCCCCcccc--cCHHHHHHHHHHcCCCEEEEeC-CC------HHHHHHHHHHHHhCCC--EEEEEEeccCccccC
Confidence 79999999765321 2366677788899999988775 11 2222333333332222 222222333221
Q ss_pred --cchHHHHHHHHc-CCcEEEEe-cccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccc
Q 013050 120 --YNASALEALLNA-GVLGLKSF-MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS 195 (450)
Q Consensus 120 --~~~~~~~~~~~~-g~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 195 (450)
...+.+.++++. ++.++... ..+...........+.+...++.|+++|++|.+|.....
T Consensus 71 ~~~~~~~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~~~----------------- 133 (265)
T 2gzx_A 71 TEEHLEWIESLAQHPKVIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRLKLPIIIHNREAT----------------- 133 (265)
T ss_dssp CHHHHHHHHHHTTSTTEEEEEEEEEECSCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCH-----------------
T ss_pred CHHHHHHHHHHhcCCCEEEEEeccCCCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEecccH-----------------
Confidence 124555555442 23333221 111000000123456788999999999999999994321
Q ss_pred cccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHh-CCCcEEEecCcchhccccccc
Q 013050 196 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKT-NGDSITVETCPHYLAFSAEEI 274 (450)
Q Consensus 196 ~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~-~g~~v~~~~~~~~~~~~~~~~ 274 (450)
..+++++++.. ....++. .|.... ..+.+.++.+ .| ++++++..... .
T Consensus 134 -----------------~~~~~~l~~~p----~~~~~~i-~H~~~g--~~~~~~~~l~~~~--~y~~~sg~~~~-~---- 182 (265)
T 2gzx_A 134 -----------------QDCIDILLEEH----AEEVGGI-MHSFSG--SPEIADIVTNKLN--FYISLGGPVTF-K---- 182 (265)
T ss_dssp -----------------HHHHHHHHHTT----GGGTCEE-ETTCCS--CHHHHHHHHHTSC--CEEEECGGGGC-S----
T ss_pred -----------------HHHHHHHHhcC----CCCCcEE-EEcCCC--CHHHHHHHHHHCC--ceEEecceeec-C----
Confidence 34455555530 0034554 465542 2344444444 45 44443432110 0
Q ss_pred CCCCCceEEcCCCCChhhHHHHHHHHhc-C-CeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHh-c
Q 013050 275 PDGDTRFKCAPPIRDAANKEKLWEALMD-G-HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRK-Y 351 (450)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g-~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~ 351 (450)
... .+.+.++. + -.++++||+ |....... .|.......+......+.+ .
T Consensus 183 --------------~~~---~~~~~i~~~~~dril~gSD~-P~~~~~~~----------~g~~~~~~~~~~~~~~l~~~~ 234 (265)
T 2gzx_A 183 --------------NAK---QPKEVAKHVSMERLLVETDA-PYLSPHPY----------RGKRNEPARVTLVAEQIAELK 234 (265)
T ss_dssp --------------SCC---HHHHHHHHSCTTTEEECCCT-TSCCCTTC----------TTSCCCGGGHHHHHHHHHHHT
T ss_pred --------------CcH---HHHHHHHhCChhhEEEccCC-CCCCCccc----------CCCCCChHHHHHHHHHHHHHh
Confidence 001 12222332 2 357899995 43211110 0111112234444444444 6
Q ss_pred CCCHHHHHHHHhhchhHHhCC
Q 013050 352 GVTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 352 gls~~~al~~aT~~~A~~lg~ 372 (450)
++|.++.-++.+.|+++++++
T Consensus 235 ~~~~~~~~~i~~~Na~rl~~~ 255 (265)
T 2gzx_A 235 GLSYEEVCEQTTKNAEKLFNL 255 (265)
T ss_dssp TCCHHHHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHHHHhCC
Confidence 899999999999999999998
No 82
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=98.61 E-value=3.4e-06 Score=78.71 Aligned_cols=245 Identities=16% Similarity=0.147 Sum_probs=126.4
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccc--cCCCccchHHHHHHH----HcCCc----
Q 013050 65 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGL--VPENAYNASALEALL----NAGVL---- 134 (450)
Q Consensus 65 ~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~g~~---- 134 (450)
.+.+.++|+|++++.. ++.........+....+..........+++... ........+.+.+++ ..|+.
T Consensus 81 l~~~~~aGv~tiV~~~-g~~g~~r~~~~l~~la~~~gi~i~~~tG~y~~~~~P~~~~~~~~~L~~~~~~ei~~gi~~t~v 159 (365)
T 3rhg_A 81 LNNFKELGGKTIVDAT-GSSSIGRDIRKLKQVAELTGINVVASSGLYIEKFEGKRLADDIDAMAKMIDDELNIGIDGTDI 159 (365)
T ss_dssp HHHHHHTTEEEEEECC-CSGGGTCCHHHHHHHHHHHCCEEECEECCCCHHHHGGGGGSCHHHHHHHHHHHHHTCSTTSSC
T ss_pred HHHHHhcCCCeEEEcC-CCCCCCCCHHHHHHHHHHHCCcEEEEeCccCCCCCchhhcCCHHHHHHHHHHHHHhccccCCc
Confidence 4577899999999985 343333556665555543221112222222000 111101234443332 22221
Q ss_pred ---EEE-EecccCCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEec-CChhhhhhhhhhccCcCCccccccccCCCChHHH
Q 013050 135 ---GLK-SFMCPSGINDFPMTNASHIKEGLSVLARY-KRPLLVHA-EMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWE 208 (450)
Q Consensus 135 ---~~~-~~~~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 208 (450)
.+. ....+ .......+.+++.+++|++. |+||.+|. +....
T Consensus 160 kag~IGEiGld~----~~t~~q~~~f~aq~~~A~~~~glPV~iH~~r~~~a----------------------------- 206 (365)
T 3rhg_A 160 RAGMIGEIGVSP----FFTDGEKNSLRAAALAQNNNPYASMNIHMPGWQRR----------------------------- 206 (365)
T ss_dssp CCCEEEEEECCT----TCCHHHHHHHHHHHHHHTTCTTCEEEEECCTTSCC-----------------------------
T ss_pred eeEEEEEEEcCC----CCCHHHHHHHHHHHHHHHHhcCCcEEEECCCCCcC-----------------------------
Confidence 121 11111 01112345678888899999 99999997 52111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCceEEEEecC-ChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCC
Q 013050 209 EAAIRELLTVAKDTRTDGPAEGAHLHIVHLS-DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPI 287 (450)
Q Consensus 209 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~-~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (450)
-.+.++++++.. + .+..++.+.|+. +. .+.+..+++.+.|..+.......... ++..+ . .+
T Consensus 207 ---~~e~l~iL~e~~-~--~~~~~vvi~H~~rs~-~~~e~a~~~l~~G~~I~~~g~g~~~t-----f~~~~--~--~~-- 268 (365)
T 3rhg_A 207 ---GDEVLDILLTEM-G--CDPAKISLAHSDPSG-KDIDYQCKMLDRGVWLEFDMIGLDIS-----FPKEG--A--AP-- 268 (365)
T ss_dssp ---HHHHHHHHTTTT-C--CCGGGEEESCCGGGT-TCHHHHHHHHHTTCEEEECCTTCCCB-----CSSSC--B--CC--
T ss_pred ---HHHHHHHHHhcc-C--CCCCceEEecCCCCC-CCHHHHHHHHhCCCEEEecCCCcccc-----ccccc--c--cc--
Confidence 133444544310 0 012346667888 43 56778888888887655532100000 00000 0 00
Q ss_pred CChhhHHHHHHHHhcCC--eeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhc
Q 013050 288 RDAANKEKLWEALMDGH--IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSER 365 (450)
Q Consensus 288 ~~~~~~~~l~~~~~~g~--~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~ 365 (450)
........+.+.++.+. .+.+.||.. .....+.. ++ .+....+......+...|+|.+++.++.|.|
T Consensus 269 ~d~~~a~~l~~li~~g~~drilleTD~p-~l~~~~~~---------G~-~~~~~l~~~~~~~~~~~Gis~e~i~~~~~~N 337 (365)
T 3rhg_A 269 SVMDTVEAVATLIERGYGNQIVLSHDVF-LKQMWAKN---------GG-NGWGFVPNVFLSLLAQRGIDKTIIDKLCIDN 337 (365)
T ss_dssp CHHHHHHHHHHHHHTTCGGGEEECCCCC-SGGGSGGG---------TS-CTTTHHHHTHHHHHHHTTCCHHHHHHHTTHH
T ss_pred chHHHHHHHHHHHHhCCCCcEEEeCCCC-CCCCCCcC---------CC-CCchhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 01123445667777775 368999953 32222211 12 2333434444445677899999999999999
Q ss_pred hhHHhCC
Q 013050 366 PAKLAGQ 372 (450)
Q Consensus 366 ~A~~lg~ 372 (450)
|+++|++
T Consensus 338 p~rlf~l 344 (365)
T 3rhg_A 338 PANLLAA 344 (365)
T ss_dssp HHHHHHS
T ss_pred HHHHHCC
Confidence 9999998
No 83
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=98.49 E-value=2.1e-05 Score=73.36 Aligned_cols=240 Identities=17% Similarity=0.195 Sum_probs=126.4
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEecccc-----CC--CccchHHHHHHHH----c
Q 013050 63 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV-----PE--NAYNASALEALLN----A 131 (450)
Q Consensus 63 ~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~----~ 131 (450)
...+.+.++|++++++.. +.........+....+.. .+++....++. +. .....+.+.++.. .
T Consensus 90 ~~l~~~~~aGv~tiV~~t--~~g~gr~~~~l~~la~~~----gv~i~~~tG~y~~~~~P~~~~~~~~~~L~~~~~~ei~~ 163 (364)
T 3k2g_A 90 AEVKQFAAVGGRSIVDPT--CRGIGRDPVKLRRISAET----GVQVVMGAGYYLASSMPETAARLSADDIADEIVAEALE 163 (364)
T ss_dssp HHHHHHHHTTCCEEEECC--CBTTTCCHHHHHHHHHHH----CCEEEECCSBCCGGGCCGGGGTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCeEEEeC--CCcccCCHHHHHHHHHHh----CCcEEEEeCccCCCCCchhhccCCHHHHHHHHHHHHHh
Confidence 345678899999999984 222234555555554432 23333333332 11 1112344443321 2
Q ss_pred C---------CcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecC-C-hhhhhhhhhhccCcCCcccccccc
Q 013050 132 G---------VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE-M-EKGSERHVKLEDDTLDTRSYSTYL 200 (450)
Q Consensus 132 g---------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 200 (450)
| +.+ .....+ .......+.++..+++|++.|+||.+|.+ . ..
T Consensus 164 Gi~~~~vkag~IG-EiGld~----~~t~~q~~~f~aq~~~A~~~glPV~iH~~gr~~a---------------------- 216 (364)
T 3k2g_A 164 GTDGTDARIGLIG-EIGVSS----DFTAEEEKSLRGAARAQVRTGLPLMVHLPGWFRL---------------------- 216 (364)
T ss_dssp CBTTBSCCCSSEE-EEECCT----TCCHHHHHHHHHHHHHHHHHCCCEEEECCTTSCC----------------------
T ss_pred ccccCCcceeEEE-EEEcCC----CCCHHHHHHHHHHHHHHHHHCCeEEEecCCCCcc----------------------
Confidence 2 221 111111 01112345678888999999999999982 1 11
Q ss_pred CCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhH-HHHHHHHHHhCCCcEEEecCcchhcccccccCCCCC
Q 013050 201 KTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASS-SLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDT 279 (450)
Q Consensus 201 ~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~-~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 279 (450)
-.+.++++++. +. +..++.+.|+... . +.+..+++.+.|..+.......... ++..+
T Consensus 217 -----------~~e~l~iL~e~--g~--~~~~vvi~H~~~s-~~~~e~a~~~l~~G~~I~f~g~gt~~~-----f~~~~- 274 (364)
T 3k2g_A 217 -----------AHRVLDLVEEE--GA--DLRHTVLCHMNPS-HMDPVYQATLAQRGAFLEFDMIGMDFF-----YADQG- 274 (364)
T ss_dssp -----------HHHHHHHHHHT--TC--CGGGEEECCCGGG-TTCHHHHHHHHHHTCEEEECCTTCCCE-----ETTTT-
T ss_pred -----------HHHHHHHHHHc--CC--CCCceEEECCCCC-CCCHHHHHHHHhCCcEEEecCCccccc-----ccccc-
Confidence 13344455543 00 1234666799843 4 7788888888887655532110000 00000
Q ss_pred ceEEcCCCCChhhHHHHHHHHhcCC--eeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHH
Q 013050 280 RFKCAPPIRDAANKEKLWEALMDGH--IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQ 357 (450)
Q Consensus 280 ~~~~~~~~~~~~~~~~l~~~~~~g~--~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~ 357 (450)
+ ..| ........+.+.++.+. .+.+.||.. ....... .+| .+....+......+...|+|.++
T Consensus 275 -~-~~~--~d~~ra~~l~~lv~~gp~drilleTD~p-~~~~~~~---------~gg-~~~~~l~~~~~~~l~~~Gis~ee 339 (364)
T 3k2g_A 275 -V-QCP--SDDEVARAILGLADHGYLDRILLSHDVF-VKMMLTR---------YGG-NGYAFVTKHFLPRLRRHGLDDAA 339 (364)
T ss_dssp -E-ECC--CHHHHHHHHHHHHHTTCGGGEEECCCCC-SGGGSGG---------GTS-CTTSHHHHHHHHHHHHTTCCHHH
T ss_pred -c-ccc--cHHHHHHHHHHHHHhCCcccEEEeCCCC-CCCCCCC---------CCC-CCcchHHHHHHHHHHHcCCCHHH
Confidence 0 011 01123455667777775 368999953 3211111 112 23333344444455678999999
Q ss_pred HHHHHhhchhHHhCC
Q 013050 358 LASWWSERPAKLAGQ 372 (450)
Q Consensus 358 al~~aT~~~A~~lg~ 372 (450)
+.++.|.||+++|++
T Consensus 340 i~~~~~~Np~rlf~l 354 (364)
T 3k2g_A 340 LETLMVTNPRRVFDA 354 (364)
T ss_dssp HHHHHTHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999999998
No 84
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=98.49 E-value=1.2e-05 Score=73.85 Aligned_cols=159 Identities=15% Similarity=0.157 Sum_probs=88.7
Q ss_pred CHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCc
Q 013050 152 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA 231 (450)
Q Consensus 152 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (450)
..+.+++.+++|++.|+||.+|.+.... ..+ .++++++.. . +..
T Consensus 166 q~~~f~aq~~~A~~~glPViiH~r~g~~-------------------------------a~~-~l~iL~e~~--~--~~~ 209 (330)
T 3pnz_A 166 EEKTIRAVARAHHETKAPIHSHTEAGTM-------------------------------ALE-QIEILKQEN--I--PLE 209 (330)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEECGGGCC-------------------------------HHH-HHHHHHHTT--C--CGG
T ss_pred HHHHHHHHHHHHHHHCCeEEEeCCCCcC-------------------------------hHH-HHHHHHHcC--C--CCC
Confidence 4566888999999999999999953110 112 244555430 0 123
Q ss_pred eEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCC--eeEEc
Q 013050 232 HLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH--IDMLS 309 (450)
Q Consensus 232 ~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~--~~~~g 309 (450)
++.+.|+... .+.+..+++.+.|..+........ ... ........+.+.++.+. .+.++
T Consensus 210 ~vvi~H~~~s-~~~e~a~~~l~~G~~i~~~g~~t~---------------~~~---~~~~~~~~l~~lv~~g~~drille 270 (330)
T 3pnz_A 210 YLSIGHMDRN-LDPYYHKQVAKTGAFMSFDGIAKI---------------KYA---PESARIAAILYLVSEGFEDQILVS 270 (330)
T ss_dssp GEEETTGGGS-CCHHHHHHHHTTTCEEEECCTTCT---------------TTC---CHHHHHHHHHHHHHTTCGGGEEEC
T ss_pred eEEEecCCCC-CCHHHHHHHHHcCcEEEEccCccc---------------CCC---ChHHHHHHHHHHHHcCCCCeEEEe
Confidence 4656788622 557778888788865554321100 000 01123344566666664 36899
Q ss_pred CCCCCCChhhhcccCCCccccCCCCcch-hhHHHHHHHHHHhcCCCHHH-HHHHHhhchhHHhCC
Q 013050 310 SDHSPTVPELKLLDEGNFLKAWGGISSL-QFVLPVTWSYGRKYGVTLEQ-LASWWSERPAKLAGQ 372 (450)
Q Consensus 310 tD~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~gls~~~-al~~aT~~~A~~lg~ 372 (450)
||.. .....+..+. ..+.... ...++.+...+...|+|.++ +.++.|.||+++|++
T Consensus 271 TD~p-~~~~~~~~G~------~~~~~~~~~~~~~~l~~~a~~~Gis~ee~i~~~t~~Np~rlf~l 328 (330)
T 3pnz_A 271 GDTA-RKTYYKHYGH------GPGLEYIAKKWVPRFIDEANEKGFDGEKLVKKFFVDNPARCFTF 328 (330)
T ss_dssp CCCC-SGGGSHHHHC------CSTTTHHHHTHHHHHHHHHHHTTSCHHHHHHHHHTHHHHHHSSC
T ss_pred CCCC-CCCCCCccCC------CCCcchHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhHHHHhcC
Confidence 9953 2111110000 0111111 11223333334678999998 999999999999987
No 85
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=98.47 E-value=1.8e-05 Score=71.19 Aligned_cols=230 Identities=13% Similarity=0.112 Sum_probs=125.3
Q ss_pred ceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCCCCCCC-CC----------------------cHH----HHHH
Q 013050 43 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPS-TI----------------------STE----TLKL 95 (450)
Q Consensus 43 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~-~~----------------------~~~----~~~~ 95 (450)
+||+|+|+..+ .....+.+.+.||..++..+....+. .. ... ....
T Consensus 4 ~iD~H~Hl~~~-------~~~~l~~m~~~Gv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~n~~ 76 (272)
T 3cjp_A 4 IIDGHTHVILP-------VEKHIKIMDEAGVDKTILFSTSIHPETAVNLRDVKKEMKKLNDVVNGKTNSMIDVRRNSIKE 76 (272)
T ss_dssp CEEEEEECCSS-------HHHHHHHHHHHTCCEEEEECCSCCGGGCCSHHHHHHHHHHHHHHHTTSSTTCHHHHHHHHHH
T ss_pred EEEehhhcCCC-------HHHHHHHHHHcCCCEEEEeCCCCCccccchhhhhhhhhhcccccccCCchhhHHHHHhhHHH
Confidence 79999998653 35566777889999987764111110 00 000 1111
Q ss_pred HHHHHhcCCceEEEEeccccCCC--ccchHHHHHHH-HcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhc-CCcEE
Q 013050 96 KVDAAEKRIYVDVGFWGGLVPEN--AYNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRPLL 171 (450)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~ 171 (450)
..+....... .+...+.+.... ....+++++++ +.|+.+++.+... .. ..+.+...++.|+++ |++|.
T Consensus 77 ~~~~~~~~p~-~~~~~g~~p~~~~~~~~~~el~~~~~~~g~~gi~~~g~~------~~-~~~~~~~~~~~a~~~~~lpv~ 148 (272)
T 3cjp_A 77 LTNVIQAYPS-RYVGFGNVPVGLSENDTNSYIEENIVNNKLVGIGELTPA------SG-QIKSLKPIFKYSMDSGSLPIW 148 (272)
T ss_dssp HHHHHHHSTT-TEEEEECCCTTCCHHHHHHHHHHHTTTTTCSEEEEECCC------TT-CGGGGHHHHHHHHHTTCCCEE
T ss_pred HHHHHHhCCC-eEEEEEEeCCCCCcHHHHHHHHHHHHhcCceEEEecCCC------CC-ccHHHHHHHHHHHhccCCcEE
Confidence 2222222111 222222222222 23345666655 4688898764311 12 567889999999999 99999
Q ss_pred EecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHH
Q 013050 172 VHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEA 251 (450)
Q Consensus 172 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~ 251 (450)
+|...+.. ......+..++++ +++.++.+.|.... ...+.++.+
T Consensus 149 iH~~~~~~-----------------------------~~~~~~~~~~l~~------~p~l~iv~~H~G~~-~~~~~~~~~ 192 (272)
T 3cjp_A 149 IHAFNPLV-----------------------------LQDIKEIAELCKA------FPKVPVILGHMGGS-NWMTAVELA 192 (272)
T ss_dssp ECCSTTCC-----------------------------HHHHHHHHHHHHH------STTSCEEEGGGGGG-GHHHHHHHH
T ss_pred EeCCCCCc-----------------------------cccHHHHHHHHHH------CCCceEEEECCCCc-cHHHHHHHH
Confidence 99954210 1123455566665 34667766777654 333344434
Q ss_pred HhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccC
Q 013050 252 KTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAW 331 (450)
Q Consensus 252 ~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~ 331 (450)
++. ..++++++... .......+.+.. +-.+++|||+ |.....
T Consensus 193 ~~~-~~~y~~~s~~~----------------------~~~~~~~~~~~~--~dril~gSD~-P~~~~~------------ 234 (272)
T 3cjp_A 193 KEI-QNLYLDTSAYF----------------------STFVLKIVINEL--PLKCIFGTDM-PFGDLQ------------ 234 (272)
T ss_dssp HHC-TTEEEECTTCS----------------------CHHHHHHHHHHS--TTTEECCCCT-TSSCHH------------
T ss_pred HhC-CCEEEEecccc----------------------cHHHHHHHHHhC--CCeEEEeCCC-CCCChH------------
Confidence 332 23555443211 011122223333 3567899995 442111
Q ss_pred CCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 013050 332 GGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 332 ~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg~ 372 (450)
.....+...++|.++.-+....|+++++++
T Consensus 235 -----------~~~~~~~~~~l~~~~~~~i~~~Na~rl~~l 264 (272)
T 3cjp_A 235 -----------LSIEAIKKMSNDSYVANAVLGDNISRLLNI 264 (272)
T ss_dssp -----------HHHHHHHHHCSSHHHHHHHHTHHHHHHHTC
T ss_pred -----------HHHHHHHhcCCCHHHHHHHHHHHHHHHhCc
Confidence 111233446899999999999999999998
No 86
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=98.35 E-value=1.6e-05 Score=73.47 Aligned_cols=267 Identities=18% Similarity=0.120 Sum_probs=134.9
Q ss_pred cceeeccccCC--CCC------Cccc---c---hHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceE
Q 013050 42 GLIDVHAHLDD--PGR------TEWE---G---FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 107 (450)
Q Consensus 42 G~iD~H~H~~~--~~~------~~~~---~---~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (450)
|++.+|=|+.. ++. ..|+ . .......+.++|++++++.. +.........+....+.. .++
T Consensus 32 G~t~~HEHl~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~a~~aGv~tiV~~~--~~~~~r~~~~l~~la~~~----g~~ 105 (339)
T 3gtx_A 32 GATLPHEHVIFGYPGYAGDVTLGPFDHAAALASCTETARALLARGIQTVVDAT--PNGCGRNPAFLREVSEAT----GLQ 105 (339)
T ss_dssp CEEEEEEEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTEEEEEECC--CTTTTCCHHHHHHHHHHH----CCE
T ss_pred CCeeeccCeeccCcccccCCCccccchHHHHHHHHHHHHHHHHhCCCeEEecC--CCccCcCHHHHHHHHHHc----CCc
Confidence 99999999832 211 1121 1 22335577899999999984 222235555555554432 123
Q ss_pred EEEeccccCCC-------------ccchHHHHHHHH----cCC-------cEEEEecccCCCCCCCCCCHHHHHHHHHHH
Q 013050 108 VGFWGGLVPEN-------------AYNASALEALLN----AGV-------LGLKSFMCPSGINDFPMTNASHIKEGLSVL 163 (450)
Q Consensus 108 ~~~~~~~~~~~-------------~~~~~~~~~~~~----~g~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a 163 (450)
+....++.+.. ....+.+.+++. .|+ ..++....+. .......+.+++.+++|
T Consensus 106 i~~~tG~hp~~~~~~~~~~~~~~~~~~~~~L~~~~~~e~~~gIg~tg~k~g~IEigld~~---~~~~~q~~~f~aq~~lA 182 (339)
T 3gtx_A 106 ILCATGFYYEGGGATTYFKFRASLGDAESEIYEMMRTEVTEGIAGTGIRAGVIKLASSRD---AITPYEQLFFRAAARVQ 182 (339)
T ss_dssp EECEECCCCTTTSSCHHHHHHHHHSCHHHHHHHHHHHHHHTCSTTSSCCCSEEEEECCSS---CCCHHHHHHHHHHHHHH
T ss_pred EEEEcCCCccCccCCcCCcccccccCCHHHHHHHHHHHHHhcccccCcccceEEEEcCCC---CCCHHHHHHHHHHHHHH
Confidence 32222232211 112344443332 111 2224333331 11123445678889999
Q ss_pred HhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhH
Q 013050 164 ARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASS 243 (450)
Q Consensus 164 ~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~ 243 (450)
++.|+||.+|...... ..+ .++++++.. .+..++.+.|+... .
T Consensus 183 ~~~glPViiH~~~gr~-------------------------------a~~-~~~iL~~~~----~~~~~~vi~H~~~~-~ 225 (339)
T 3gtx_A 183 RETGVPIITHTQEGQQ-------------------------------GPQ-QAELLTSLG----ADPARIMIGHMDGN-T 225 (339)
T ss_dssp HHHCCCEEEECSTTCC-------------------------------HHH-HHHHHHHTT----CCGGGEEECCGGGC-C
T ss_pred HHHCCeEEEeCCCCcC-------------------------------HHH-HHHHHHHcC----CCcccEEEEccCCC-C
Confidence 9999999999932100 012 355555430 01234556899732 5
Q ss_pred HHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCe--eEEcCCCCCCChhhhc
Q 013050 244 SLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHI--DMLSSDHSPTVPELKL 321 (450)
Q Consensus 244 ~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~--~~~gtD~~~~~~~~~~ 321 (450)
+.+..+++.+.|..+........ .+...| ........+.+.++.+.. +.+.||..-.....+.
T Consensus 226 ~~e~a~~~l~~G~~i~~~g~~t~-------------~~~~~p--~~~~~~~~l~~li~~~~~drilleTD~p~~~~~~P~ 290 (339)
T 3gtx_A 226 DPAYHRETLRHGVSIAFDRIGLQ-------------GMVGTP--TDAERLSVLTTLLGEGYADRLLLSHDSIWHWLGRPP 290 (339)
T ss_dssp CHHHHHHHHTTTCEEEECCTTCC-------------SSTTCC--CHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCC
T ss_pred CHHHHHHHHHcCcEEEEccCccc-------------cccCCC--chHHHHHHHHHHHHhcCCCeEEEecCCCccccCCcc
Confidence 57888888888865555321000 000000 011334456666666653 6899995311000000
Q ss_pred ccCCCccc-cCCCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhC
Q 013050 322 LDEGNFLK-AWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAG 371 (450)
Q Consensus 322 ~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg 371 (450)
. .+... ...+.......+......+...|+|.+++.++.|.||+++|+
T Consensus 291 ~--~p~~~~~~~g~n~p~~l~~~~~~~~~~~Gis~e~i~~~~~~Np~rlf~ 339 (339)
T 3gtx_A 291 A--IPEAALPAVKDWHPLHISDDILPDLRRRGITEEQVGQMTVGNPARLFG 339 (339)
T ss_dssp C--CCGGGHHHHHTCSTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHHC
T ss_pred c--ccccccccCCCCCchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 0 00000 000112233333444445667899999999999999999985
No 87
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=98.34 E-value=1.1e-05 Score=73.21 Aligned_cols=248 Identities=15% Similarity=0.087 Sum_probs=131.0
Q ss_pred cceeeccccCCCCCC----------cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEe
Q 013050 42 GLIDVHAHLDDPGRT----------EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 111 (450)
Q Consensus 42 G~iD~H~H~~~~~~~----------~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (450)
++||+|+|+..+... ...+.....+.+...||+..+..+.... ..... .+....+....+ +...
T Consensus 13 ~iID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~-~~~n~-~~~~~~~~~p~r----~~~~ 86 (288)
T 2ffi_A 13 TAIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFL-GTDNR-YLLSALQTVPGQ----LRGV 86 (288)
T ss_dssp CCEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGG-TTCCH-HHHHHHHHSTTT----BCCB
T ss_pred CceeecccccCCCCCCCCcccCCCCCCCCHHHHHHHHHHhCCCeEEEECCccc-cccHH-HHHHHHHHCCCC----EEEE
Confidence 799999999754210 0123556667788899998776541111 11222 222222222111 1111
Q ss_pred ccccCCCccchHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcC
Q 013050 112 GGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTL 191 (450)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~ 191 (450)
.++.+.. ..++++++.+.|+.+++....+.+ .+....+.+...++.|+++|++|.+|.....
T Consensus 87 ~~v~p~~--~~~el~~~~~~g~~Gi~~~~~~~~---~~~~~~~~~~~~~~~a~~~~lpv~iH~~~~~------------- 148 (288)
T 2ffi_A 87 VMLERDV--EQATLAEMARLGVRGVRLNLMGQD---MPDLTGAQWRPLLERIGEQGWHVELHRQVAD------------- 148 (288)
T ss_dssp BCCCSSC--CHHHHHHHHTTTCCEEECCCSSSC---CCCTTSTTTHHHHHHHHHHTCEEEECSCTTT-------------
T ss_pred EEeCCCC--CHHHHHHHHHCCCeEEEEecccCC---CCCcccHHHHHHHHHHHHCCCeEEEeechhh-------------
Confidence 2222222 246778888889999977554321 1234567789999999999999999995421
Q ss_pred CccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhH-------HHHHHHHHHhCCCcEEEecCc
Q 013050 192 DTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASS-------SLDLLMEAKTNGDSITVETCP 264 (450)
Q Consensus 192 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~-------~~~~~~~~~~~g~~v~~~~~~ 264 (450)
+..+..++++ ++ .++.+.|+..... ..+.+..+.+. ..+++.++.
T Consensus 149 --------------------~~~~~~~~~~------~p-l~~vi~H~g~~~~~~~~~~~~~~~~~~l~~~-~n~y~~~sg 200 (288)
T 2ffi_A 149 --------------------IPVLVRALQP------YG-LDIVIDHFGRPDARRGLGQPGFAELLTLSGR-GKVWVKVSG 200 (288)
T ss_dssp --------------------HHHHHHHHTT------TT-CCEEESGGGSCCTTSCTTCTTHHHHTTCCCC-SCEEEEEEC
T ss_pred --------------------HHHHHHHHHH------CC-CCEEEECCCCCCCCCCCCChhHHHHHHHHhC-CCEEEEeCc
Confidence 2345566665 34 6777789876411 12333322111 124443332
Q ss_pred chhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhc-CC-eeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHH
Q 013050 265 HYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMD-GH-IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLP 342 (450)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 342 (450)
...... ..+.........+...++. |. .+++|||+ |..... ... .+.
T Consensus 201 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~g~drll~gSD~-P~~~~~-------------~~~----~~~ 249 (288)
T 2ffi_A 201 IYRLQG-------------SPEENLAFARQALCALEAHYGAERLMWGSDW-PHTQHE-------------SEV----SFG 249 (288)
T ss_dssp GGGSSS-------------CHHHHHHHHHHHHHHHHHHTCGGGEEEECCT-TCTTCT-------------TTC----CHH
T ss_pred chhhcc-------------ccCCCHHHHHHHHHHHHHHhCCCceEEecCC-CCCCCC-------------CCC----CHH
Confidence 111000 0000000111233344343 43 47899995 442110 000 122
Q ss_pred HHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 013050 343 VTWSYGRKYGVTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 343 ~~~~~~~~~gls~~~al~~aT~~~A~~lg~ 372 (450)
..++.+.+.+++.++.-+....|+++++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~i~~~NA~rl~~l 279 (288)
T 2ffi_A 250 SAVEQFEALGCSAQLRQALLLDTARALFGF 279 (288)
T ss_dssp HHHHHHHHHCCCHHHHHHHHTHHHHHHTTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHCHHHHhCc
Confidence 333445556679999999999999999998
No 88
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=98.28 E-value=8.6e-06 Score=72.32 Aligned_cols=121 Identities=15% Similarity=0.169 Sum_probs=63.0
Q ss_pred ceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHH---HHHHHHH----HHhcCCceEEEEecccc
Q 013050 43 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTE---TLKLKVD----AAEKRIYVDVGFWGGLV 115 (450)
Q Consensus 43 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~ 115 (450)
|||+|+|+.... +. ....+..+||+.++..+........... .+....+ .+... ...+....++.
T Consensus 2 ~iDtH~Hld~~~------~~-~l~~a~~~GV~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~-~~~v~~~~GiH 73 (261)
T 3guw_A 2 YFDSHLHSEGLG------FS-ELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAA-GVKMHPAVGIH 73 (261)
T ss_dssp CCBCCCCGGGCC------HH-HHHHHHTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHHTT-TCEECCBCCCC
T ss_pred eEEeccCCCCCC------hH-HHHHHHHCCCcEEEEeccCccccchhhhHHHHHHHHHHHHHHHHHHC-CCCEEEEEEEC
Confidence 799999998654 22 3567889999999876522111111111 1112221 12221 22333333333
Q ss_pred CCCc--cchHHHHHHHHcCCcEEEEe-cccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 013050 116 PENA--YNASALEALLNAGVLGLKSF-MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 176 (450)
Q Consensus 116 ~~~~--~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 176 (450)
+... ...+.+..+.+..+.++... ..+ ......+.+++.+++|+++++||.+|.+.
T Consensus 74 P~~~~~~~~~~~~~l~~~~vvaIGEiGLD~-----~~~~Q~~~f~~ql~lA~e~~lPv~iH~r~ 132 (261)
T 3guw_A 74 PRCIPPDYEFVLGYLEEGEWVAFGEIGLEL-----VTDEEIEVLKSQLELAKRMDVPCIIHTPR 132 (261)
T ss_dssp GGGCCTTTHHHHHHHTTSCCSCEEEEECSS-----CCHHHHHHHHHHHHHHHHHTCCEEEECCS
T ss_pred cccccccHHHHHHHhCcCCeEEEEEecCCC-----ChHHHHHHHHHHHHHHHHhCCeEEEEcCC
Confidence 3221 12233333433445444321 222 11234467889999999999999999964
No 89
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=98.26 E-value=2.5e-05 Score=72.33 Aligned_cols=135 Identities=16% Similarity=0.148 Sum_probs=76.6
Q ss_pred eccceeeccccCCCCCCcc-----------------cch-HHHHHHHHhCCceEEEeCCCCCCCCC---CcH--------
Q 013050 40 MPGLIDVHAHLDDPGRTEW-----------------EGF-PSGTKAAAAGGITTLIDMPLNSDPST---IST-------- 90 (450)
Q Consensus 40 ~PG~iD~H~H~~~~~~~~~-----------------~~~-~~~~~~~~~~GvT~~~~~~~~~~~~~---~~~-------- 90 (450)
|+++||+|+|+..+..... .+. ....+.+.+.||...+..+ .. +.. ...
T Consensus 1 m~~~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~-~~-p~~~~~~d~~~~~~~~~ 78 (327)
T 2dvt_A 1 MQGKVALEEHFAIPETLQDSAGFVPGDYWKELQHRLLDIQDTRLKLMDAHGIETMILSL-NA-PAVQAIPDRRKAIEIAR 78 (327)
T ss_dssp CCSEEEEEEEECCHHHHGGGTTTSCSSHHHHHHHHHHCSSSHHHHHHHHTTEEEEEEEE-CS-SGGGGCCCHHHHHHHHH
T ss_pred CCCeEEEecccCCHHHHHHHhccCCcccccccchhcCChhHHHHHHhhhcCCcEEEEeC-CC-CcccccCChHHHHHHHH
Confidence 5789999999975432110 023 4566778889999887653 11 111 011
Q ss_pred HHHHHHHHHHhcCCceEEEEeccccCCCc-cchHHHHHHHH-cCCcEEEEecccCCC--CCCCCCCHHHHHHHHHHHHhc
Q 013050 91 ETLKLKVDAAEKRIYVDVGFWGGLVPENA-YNASALEALLN-AGVLGLKSFMCPSGI--NDFPMTNASHIKEGLSVLARY 166 (450)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~g~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~a~~~ 166 (450)
..-....+..... +-++...+.+..... ...++++++++ .|+.+++....+... ........+.+...++.|+++
T Consensus 79 ~~n~~~~~~~~~~-p~r~~~~~~v~p~~~~~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 157 (327)
T 2dvt_A 79 RANDVLAEECAKR-PDRFLAFAALPLQDPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKL 157 (327)
T ss_dssp HHHHHHHHHHHHC-TTTEEEEECCCTTSHHHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhhC-CCceEEEeecCcCCHHHHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHc
Confidence 1111122222221 112222333444333 25677777765 599999876543210 001235667899999999999
Q ss_pred CCcEEEecCCh
Q 013050 167 KRPLLVHAEME 177 (450)
Q Consensus 167 g~~v~~H~~~~ 177 (450)
|++|.+|....
T Consensus 158 ~lpv~iH~~~~ 168 (327)
T 2dvt_A 158 DVPFYLHPRNP 168 (327)
T ss_dssp TCCEEEECCCC
T ss_pred CCeEEECCCCC
Confidence 99999999643
No 90
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=98.17 E-value=3.8e-05 Score=71.78 Aligned_cols=40 Identities=15% Similarity=0.067 Sum_probs=32.1
Q ss_pred ccceeeccccCCCCCC--------cccchHHHHHHHHhCCceEEEeCC
Q 013050 41 PGLIDVHAHLDDPGRT--------EWEGFPSGTKAAAAGGITTLIDMP 80 (450)
Q Consensus 41 PG~iD~H~H~~~~~~~--------~~~~~~~~~~~~~~~GvT~~~~~~ 80 (450)
+-|||+|+|+..+.+. ..+++......+...||..++..+
T Consensus 12 ~~~iDih~nL~d~~f~g~y~~~~~h~~D~~~vl~rA~~~GV~~ii~~g 59 (401)
T 3e2v_A 12 LKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTG 59 (401)
T ss_dssp CCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECC
T ss_pred CCeEEEEeCcCcHHHhhhccccccCccCHHHHHHHHHHCCCCEEEEec
Confidence 5799999999876543 125688888999999999998886
No 91
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=98.16 E-value=0.00023 Score=65.96 Aligned_cols=260 Identities=16% Similarity=0.151 Sum_probs=132.7
Q ss_pred cceeeccccCC--CCCC------ccc---c---hHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceE
Q 013050 42 GLIDVHAHLDD--PGRT------EWE---G---FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 107 (450)
Q Consensus 42 G~iD~H~H~~~--~~~~------~~~---~---~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (450)
|++.+|-|+.. ++.. .+. . .....+.+.+.|+.|+++.. .. ..-.....+....+.. .++
T Consensus 52 G~tl~HEHl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~Gg~tIVd~T-~~-g~GRd~~~l~~is~~t----Gv~ 125 (360)
T 3tn4_A 52 GKTLIHEHFLFGYPGFQGDVTRGTFREDESLRVAVEAAEKMKRHGIQTVVDPT-PN-DCGRNPAFLRRVAEET----GLN 125 (360)
T ss_dssp CSEESSCEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTCCEEEECC-CT-TTTCCHHHHHHHHHHH----CCE
T ss_pred CCceeccCeeecChhhhcccccchhhhhhHHHHHHHHHHHHHhcCCCeEEECC-CC-CcCcCHHHHHHHHHHc----CCC
Confidence 99999999732 2211 010 1 22235567899999999984 22 2234455555444332 445
Q ss_pred EEEeccccCCC---c----------cchHHHHHH----HHcCCc--EE-----EEecccCCCCCCCCCCHHHHHHHHHHH
Q 013050 108 VGFWGGLVPEN---A----------YNASALEAL----LNAGVL--GL-----KSFMCPSGINDFPMTNASHIKEGLSVL 163 (450)
Q Consensus 108 ~~~~~~~~~~~---~----------~~~~~~~~~----~~~g~~--~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~a 163 (450)
+....++.... + ...+.+.++ +..|+. ++ +...++ ..........++..+++|
T Consensus 126 IV~~TG~y~~~~~~p~~~~~~~~~~~~~e~l~~~~i~Ei~~Gi~~tgikaG~I~~~~~~---~~~t~~E~k~frA~a~aa 202 (360)
T 3tn4_A 126 IICATGYYYEGEGAPPYFQFRRLLGTAEDDIYDMFMAELTEGIADTGIKAGVIKLASSK---GRITEYEKMFFRAAARAQ 202 (360)
T ss_dssp EEEEECCCCGGGSCTHHHHHHHHHTCHHHHHHHHHHHHHHTCSTTSCCCCSEEEEECBT---TBCCHHHHHHHHHHHHHH
T ss_pred EEEeCccccCcccCCcccchhhhcccCHHHHHHHHHHHHHhccccCCCcceEEEEEccC---CCCCHHHHHHHHHHHHHH
Confidence 44333322111 0 011222222 233432 22 221111 111223345688889999
Q ss_pred HhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEec-CChh
Q 013050 164 ARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHL-SDAS 242 (450)
Q Consensus 164 ~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~-~~~~ 242 (450)
++.|+||.+|.+.... .. +.++++++. + ....++.+.|+ .+
T Consensus 203 ~etG~Pv~iHt~~~~~-------------------------------~~-e~l~iL~ee--G--~~~~~vvi~H~~~~-- 244 (360)
T 3tn4_A 203 KETGAVIITHTQEGTM-------------------------------GP-EQAAYLLEH--G--ADPKKIVIGHMCDN-- 244 (360)
T ss_dssp HHHCCEEEEECSTTCC-------------------------------HH-HHHHHHHHT--T--CCGGGEEECCGGGC--
T ss_pred HHhCCcEEEEcCcccC-------------------------------CH-HHHHHHHHc--C--CCCCceEEEcCCCC--
Confidence 9999999999954321 01 122233332 0 01235667785 44
Q ss_pred HHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCe--eEEcCCCC------C
Q 013050 243 SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHI--DMLSSDHS------P 314 (450)
Q Consensus 243 ~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~--~~~gtD~~------~ 314 (450)
.+.+..+++.+.|..+..+..-... ....| ......+.+.+..+.|.. +.+++|.. |
T Consensus 245 ~d~~~~~~~l~~G~yl~fD~iG~~~-------------~~~~p--~d~~r~~~l~~lv~~g~~drILLstDa~~~~~~~p 309 (360)
T 3tn4_A 245 TDPDYHRKTLAYGVYIAFDRFGIQG-------------MVGAP--TDEERVRTLLALLRDGYEKQIMLSHDTVNVWLGRP 309 (360)
T ss_dssp CCHHHHHHHHTTTCEEEECCTTCCC-------------STTCC--CHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSC
T ss_pred CCHHHHHHHHHcCCEEEEccccccc-------------ccCCC--ChHHHHHHHHHHHHhcCcceEEEecCCCcccccCC
Confidence 5667888888888766554211000 00000 012334456666676653 78999952 2
Q ss_pred CChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHh
Q 013050 315 TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLA 370 (450)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~l 370 (450)
......... .. +-.+....+...+-.+++.|+|.+++-++.+.||+++|
T Consensus 310 y~~p~p~r~------~~-~~~~y~~i~~~~ip~L~~~Gvs~e~I~~i~~~NP~rlf 358 (360)
T 3tn4_A 310 FTLPEPFAE------MM-KNWHVEHLFVNIIPALKNEGIRDEVLEQMFIGNPAALF 358 (360)
T ss_dssp CCCCHHHHH------HT-TTCSTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHH
T ss_pred CCCcccccc------cC-CCCCchhHHHHHHHHHHHcCCCHHHHHHHHHHhHHHHh
Confidence 211111000 00 11222333344444567789999999999999999987
No 92
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=98.03 E-value=6.3e-05 Score=70.67 Aligned_cols=144 Identities=16% Similarity=0.097 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCce
Q 013050 153 ASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 232 (450)
Q Consensus 153 ~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (450)
++.+.++++.|+++|+++.+|+.+... +.|. ..+...+.+. +..
T Consensus 214 ~~~~~~~~~~A~~~gl~~~~HagE~~~----------------------~~~~----~~i~~al~~l----------g~~ 257 (371)
T 2pgf_A 214 LKEYKEIFDYVRESGVPLSVHAGEDVT----------------------LPNL----NTLYSAIQVL----------KVE 257 (371)
T ss_dssp GGGGHHHHHHHHHTTCCBEEEESCCTT----------------------SSSS----HHHHHHHHTS----------CCS
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCCCC----------------------CCch----HHHHHHHhcc----------CCC
Confidence 678999999999999999999954310 0010 1122222221 222
Q ss_pred EEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCC
Q 013050 233 LHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDH 312 (450)
Q Consensus 233 ~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~ 312 (450)
.+.|+....+..+.++.+++.++.+.+ ||......... +. ....++.++++.|+.+++|||.
T Consensus 258 -ri~Hgv~l~~~~~l~~~l~~~~i~v~~--cP~SN~~l~~~-----------~~----~~~~pi~~ll~~Gv~V~lgTD~ 319 (371)
T 2pgf_A 258 -RIGHGIRVAESQELIDMVKEKNILLEV--CPISNVLLKNA-----------KS----MDTHPIRQLYDAGVKVSVNSDD 319 (371)
T ss_dssp -EEEECGGGGGCHHHHHHHHHTTCEEEE--CHHHHHHTTSS-----------SC----GGGCTHHHHHHTTCEEEECCBC
T ss_pred -EEecchhccccHHHHHHHHHcCCeEEE--CcchhHHhCCC-----------Cc----cccChHHHHHHCCCeEEEeCCC
Confidence 356665432444567778888876554 77654322100 00 0112356778999999999995
Q ss_pred CCCChhhhcccCCCccccCCCCcchhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHHhCC
Q 013050 313 SPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~gls~~~al~~aT~~~A~~lg~ 372 (450)
...+ + . .+...+.. ....++|++++ +.+|.|++++..+
T Consensus 320 ~~~~----------------~----~-~l~~e~~~a~~~~~l~~~~l-~~lt~ns~~asf~ 358 (371)
T 2pgf_A 320 PGMF----------------L----T-NINDDYEELYTHLNFTLEDF-MKMNEWALEKSFM 358 (371)
T ss_dssp HHHH----------------T----C-CHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHCCS
T ss_pred Cccc----------------C----C-CHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHcC
Confidence 3211 1 0 12222233 33468999996 8889999999887
No 93
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=97.91 E-value=0.00014 Score=66.47 Aligned_cols=249 Identities=12% Similarity=0.028 Sum_probs=133.0
Q ss_pred ceeeccccCCCC---CCcc----------cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEE
Q 013050 43 LIDVHAHLDDPG---RTEW----------EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVG 109 (450)
Q Consensus 43 ~iD~H~H~~~~~---~~~~----------~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (450)
.||+|+|+..+. ..+. -........+..+||+.++-.. .. ..........+.+... ..-++
T Consensus 5 ~iD~H~H~~~~~~~~~pw~~~~~~~~~~~~~~~~ll~~~~~~GV~~~V~v~-~~----~~~~~n~~l~~la~~~-p~~~g 78 (303)
T 4do7_A 5 RIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQ-AR----AGRDETAFLLELACDE-ARIAA 78 (303)
T ss_dssp CEEEEECCBCCCGGGCTTCCTTCGGGSSCBCHHHHHHHHHHTTCCEEEEEC-CS----SSHHHHHHHHHHHTTC-TTEEE
T ss_pred EEeCCEecccCCCCCCCCCCCccccccCCCCHHHHHHHHHhcCCcEEEEEc-cC----CcHHHHHHHHHHHHhC-CCeEE
Confidence 499999997642 1111 1244556677889999988764 11 1122233333333322 21222
Q ss_pred EeccccCCCccchHHHHHHHHcCCcEEEEecccCCCCCCC--CCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhc
Q 013050 110 FWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFP--MTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLE 187 (450)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~ 187 (450)
..+.+....++..++++++.+.|+.|++...... ..+ ....+.+...++.++++|++|.+|.....
T Consensus 79 ~vg~v~~~~~~~~~~L~~l~~~gv~Gir~~~~~~---~~~~~~~~~~~~~~~~~~~~~~glpv~ih~~~~~--------- 146 (303)
T 4do7_A 79 VVGWEDLRAPQLAERVAEWRGTKLRGFRHQLQDE---ADVRAFVDDADFARGVAWLQANDYVYDVLVFERQ--------- 146 (303)
T ss_dssp EEECCCTTCTTHHHHHTTCCSSCEEEEECCGGGS---SCHHHHHHCHHHHHHHHHHHHTTCEEEECCCGGG---------
T ss_pred EEEEeCCCCchHHHHHHHHhhcCceEEEecCcCC---CCccccccCHHHHHHHHHHHHCCCeEEEecCHHH---------
Confidence 2222222333345556666667888888654221 111 24456788999999999999999995432
Q ss_pred cCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChh--------HH----HHHHHHHHhCC
Q 013050 188 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS--------SS----LDLLMEAKTNG 255 (450)
Q Consensus 188 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~--------~~----~~~~~~~~~~g 255 (450)
+..+.+++++ +++.++.+.|+.... .. .+.+..+.+.
T Consensus 147 ------------------------l~~l~~ll~~------~P~l~iVi~H~G~p~~~~~~~~~~~~~~w~~~l~~la~~- 195 (303)
T 4do7_A 147 ------------------------LPDVQAFCAR------HDAHWLVLDHAGKPALAEFDRDDTALARWRAALRELAAL- 195 (303)
T ss_dssp ------------------------HHHHHHHHHH------CCSSCEEEGGGGCCCGGGCC---CHHHHHHHHHHHHHTS-
T ss_pred ------------------------HHHHHHHHHH------CCCCCEEEeCCCCCCccccccccchHHHHHHHHHHHHhC-
Confidence 3456667765 568899999998631 01 1234444332
Q ss_pred CcEEEecCcchhcccccccCCCCCceEEcCCCCC--hhhHH-HHHHHHhc-C-CeeEEcCCCCCCChhhhcccCCCcccc
Q 013050 256 DSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRD--AANKE-KLWEALMD-G-HIDMLSSDHSPTVPELKLLDEGNFLKA 330 (450)
Q Consensus 256 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~l~~~~~~-g-~~~~~gtD~~~~~~~~~~~~~~~~~~~ 330 (450)
..+++.++..+...... ...+. ..... .+...++. | -.+++|||+ |.....
T Consensus 196 ~nv~~klSg~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~G~dri~fgSD~-P~~~~~----------- 251 (303)
T 4do7_A 196 PHVVCKLSGLVTEADWR------------RGLRASDLRHIEQCLDAALDAFGPQRLMFGSDW-PVCLLA----------- 251 (303)
T ss_dssp TTEEEEECSCGGGSCTT------------TCCCHHHHHHHHHHHHHHHHHHCGGGEEECCCB-TGGGGT-----------
T ss_pred CCEEEEeCCcccccccc------------ccccCCCHHHHHHHHHHHHHHhCcccEEEeCCC-CCCcCc-----------
Confidence 34676655432211000 00000 11111 12222322 3 347899994 432111
Q ss_pred CCCCcchhhHHHHHHHHHHh---cCCCHHHHHHHHhhchhHHhCC
Q 013050 331 WGGISSLQFVLPVTWSYGRK---YGVTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 331 ~~g~~~~~~~~~~~~~~~~~---~gls~~~al~~aT~~~A~~lg~ 372 (450)
+ .+...+..+.+ .+++.++.=+....|+++++|+
T Consensus 252 --~------~~~~~~~~~~~~~~~~l~~~~~~~i~~~Na~rl~~l 288 (303)
T 4do7_A 252 --A------SYDEVASLVERWAESRLSAAERSALWGGTAARCYAL 288 (303)
T ss_dssp --C------CHHHHHHHHHHHHHHHCCHHHHHHHTTHHHHHHTTC
T ss_pred --C------CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCC
Confidence 0 01222222222 4689999999999999999999
No 94
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=97.86 E-value=0.0011 Score=60.49 Aligned_cols=130 Identities=12% Similarity=0.022 Sum_probs=73.6
Q ss_pred ceeeccccCCCCCC----------------cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcH--------HHHHHHHH
Q 013050 43 LIDVHAHLDDPGRT----------------EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTIST--------ETLKLKVD 98 (450)
Q Consensus 43 ~iD~H~H~~~~~~~----------------~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~--------~~~~~~~~ 98 (450)
+||+|+|+..+... ...+.....+.+.+.||...+..+.......... ..-....+
T Consensus 3 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 82 (307)
T 2f6k_A 3 KIDFHTHYLPTSYVEALKRHVPGDPDGWPTPEWTPQLTLNFMRDNDISYSILSLSSPHVNFGDKAETIRLVEAANDDGKS 82 (307)
T ss_dssp EEEEEEECCCHHHHHHHHHHCCSSGGGSCCCCCCHHHHHHHHHHTTEEEEEEECCSSCSCSSCHHHHHHHHHHHHHHHHH
T ss_pred eEEEecCcCCHHHHHHHHHhccCCcccCcCCCCCHHHHHHHHHHcCCCEEEEeCCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 79999999754211 0123556677888999999766531100001111 11111222
Q ss_pred HHhcCCceEEEEeccccCCC-ccchHHHHHHHH-cCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 013050 99 AAEKRIYVDVGFWGGLVPEN-AYNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 176 (450)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 176 (450)
..... +-++...+.+.... ....++++++++ .|+.+++....+.+ .....+.+...++.|+++|++|.+|...
T Consensus 83 ~~~~~-p~r~~~~~~~p~~~~~~~~~el~~~~~~~g~~gi~~~~~~~~----~~~~~~~~~~~~~~a~~~~lpv~iH~~~ 157 (307)
T 2f6k_A 83 LAQQY-PDQLGYLASLPIPYELDAVKTVQQALDQDGALGVTVPTNSRG----LYFGSPVLERVYQELDARQAIVALHPNE 157 (307)
T ss_dssp HHHHC-TTTEEEEECCCTTCHHHHHHHHHHHHHTSCCSEEEEESEETT----EETTCGGGHHHHHHHHTTTCEEEEECCC
T ss_pred HHHhC-ccceeEEEeCCCCCHHHHHHHHHHHHhccCCcEEEEeccCCC----CCCCcHhHHHHHHHHHHcCCeEEECCCC
Confidence 22221 11223333232222 344677777775 69999977654421 1234577899999999999999999964
Q ss_pred h
Q 013050 177 E 177 (450)
Q Consensus 177 ~ 177 (450)
.
T Consensus 158 ~ 158 (307)
T 2f6k_A 158 P 158 (307)
T ss_dssp C
T ss_pred C
Confidence 3
No 95
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=97.79 E-value=0.0037 Score=56.85 Aligned_cols=249 Identities=13% Similarity=0.036 Sum_probs=133.5
Q ss_pred EeccceeeccccCCCC--CCcc---------cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceE
Q 013050 39 IMPGLIDVHAHLDDPG--RTEW---------EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 107 (450)
Q Consensus 39 v~PG~iD~H~H~~~~~--~~~~---------~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (450)
+=||.||+|.|+..+. +.+. -........+...||+..+-.. ......+... +....+... .....
T Consensus 23 ~p~~~iDaH~H~~~~~~~~p~~~~~~~~~~~~~~e~l~~~m~~~GI~~~Vlvq-~~~~~~dN~~-ll~~l~~~~-~r~~G 99 (303)
T 4d9a_A 23 PPPGAIDAHCHVFGPMAQFPFSPKAKYLPRDAGPDMLFALRDHLGFARNVIVQ-ASCHGTDNAA-TLDAIARAQ-GKARG 99 (303)
T ss_dssp CCTTCEEEEECCBCCTTTSCCCTTCSCCBCCBCHHHHHHHHHHHTCSEEEEEC-CGGGTTCCHH-HHHHHHHTT-TSEEE
T ss_pred CCCCceEeeeEeecCcccCCCCCCCCCcCCCCCHHHHHHHHHHcCCCeEEEec-cccccccHHH-HHHHHHhCC-CcEEE
Confidence 4568999999997531 1111 1244456677788999987663 1111122222 222222221 11222
Q ss_pred EEEeccccCCCccchHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhc
Q 013050 108 VGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLE 187 (450)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~ 187 (450)
+. .+.... ..++++++.+.|+.|++....... ....+.+.+...++.+.+ |++|.+|.....
T Consensus 100 va---~vdp~~--~~~eL~~l~~~G~rGvR~~~~~~~---~~~~~~~~~~~~~~~l~~-gl~v~l~~~~~~--------- 161 (303)
T 4d9a_A 100 IA---VVDPAI--DEAELAALHEGGMRGIRFNFLKRL---VDDAPKDKFLEVAGRLPA-GWHVVIYFEADI--------- 161 (303)
T ss_dssp EE---CCCTTC--CHHHHHHHHHTTEEEEEEECCTTT---CSCCCHHHHHHHHTSCCT-TCEEEEECCGGG---------
T ss_pred EE---EeCCCC--CHHHHHHHHHCCCCEEEeecccCC---ccccCHHHHHHHHHHHhc-CCEEEEeccccc---------
Confidence 22 122221 246788888889999998653321 124678889999999999 999999994322
Q ss_pred cCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCCh-------hHHHHHHHHHHhCCCcEEE
Q 013050 188 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-------SSSLDLLMEAKTNGDSITV 260 (450)
Q Consensus 188 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~-------~~~~~~~~~~~~~g~~v~~ 260 (450)
+..+.+++++. +.++.+.|+... ....+.+.++.+.--.+++
T Consensus 162 ------------------------l~~l~~~~~~~-------~~~iVidH~G~p~~~~g~~~~~~~~~~~l~~~~~NV~v 210 (303)
T 4d9a_A 162 ------------------------LEELRPFMDAI-------PVPIVIDHMGRPDVRQGPDGADMKAFRRLLDSREDIWF 210 (303)
T ss_dssp ------------------------HHHHHHHHHHC-------SSCEEEGGGGCCCGGGCTTSHHHHHHHHHHHHCTTEEE
T ss_pred ------------------------HHHHHHHHHHC-------CCcEEEeCCCCCCcccCCCCHHHHHHHHHHhhCCCEEE
Confidence 45667777763 788999999852 0223333333333234777
Q ss_pred ecCcchhcccccccCCCCCceEEcCCCCChhhHHHH-HHHHhc-CCeeEEcCCCCCCChhhhcccCCCccccCCCCcchh
Q 013050 261 ETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKL-WEALMD-GHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 338 (450)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~-g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~ 338 (450)
.++..+.... .... ......+ ...++. --.++.|||+ |...... +...
T Consensus 211 KlSg~~~~~~--------------~~~~-~~~~~~~~~~~~~~~~dRlmfGSDw-P~~~~~~------------~~~~-- 260 (303)
T 4d9a_A 211 KATCPDRLDP--------------AGPP-WDDFARSVAPLVADYADRVIWGTAW-PHPNMQD------------AIPD-- 260 (303)
T ss_dssp ECCCHHHHCT--------------TCTT-CHHHHHHHHHHHHHTTTSEECCCCT-TCTTCTT------------SCCC--
T ss_pred EeeCceecCC--------------CCCC-HHHHHHHHHHHHHhCcccEEEecCC-CCccccc------------CCCC--
Confidence 7665332110 0000 1122222 222332 2346799994 4432111 0000
Q ss_pred hHHHHHHHHHHhcCC-CHHHHHHHHhhchhHHhCC
Q 013050 339 FVLPVTWSYGRKYGV-TLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 339 ~~~~~~~~~~~~~gl-s~~~al~~aT~~~A~~lg~ 372 (450)
...++..+.+. + +.++.=+..-.|+++++++
T Consensus 261 --~~~~~~~~~~~-~~~~~~~~~il~~NA~rly~~ 292 (303)
T 4d9a_A 261 --DGLVVDMIPRI-APTPELQHKMLVTNPMRLYWS 292 (303)
T ss_dssp --HHHHHHTHHHH-SCSHHHHHHHHTHHHHHHHCG
T ss_pred --HHHHHHHHHHH-CCCHHHHHHHHHHHHHHHhCC
Confidence 11122222222 4 5677778888999999998
No 96
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=97.62 E-value=0.00099 Score=61.45 Aligned_cols=157 Identities=15% Similarity=0.059 Sum_probs=94.3
Q ss_pred cCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHH
Q 013050 131 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEA 210 (450)
Q Consensus 131 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 210 (450)
.++.|+...... ...+.+.+.++++.|+++|+++.+|+.+... ..
T Consensus 163 ~~vvG~dL~g~E------~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~-----------------------------~~ 207 (343)
T 3rys_A 163 APIAGIGLDSAE------VGNPPSKFERLYQRAAEAGLRRIAHAGEEGP-----------------------------AS 207 (343)
T ss_dssp CCCCEEEEESCC------TTCCGGGGHHHHHHHHHTTCEEEEEESSSSC-----------------------------HH
T ss_pred CCEEEEecCCcc------cCCCHHHHHHHHHHHHHCCCeEEEeeCCCCC-----------------------------HH
Confidence 567777664321 1245678899999999999999999954321 11
Q ss_pred HHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCCh
Q 013050 211 AIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA 290 (450)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (450)
.+..++.++. . -.+.|+....+..+.++.+++.++.+.+ ||........ + +.
T Consensus 208 ~i~~al~~lg----------~-~rIgHgv~l~~d~~l~~~l~~~~i~le~--cP~SN~~l~~-~----------~~---- 259 (343)
T 3rys_A 208 YITEALDVLH----------V-ERIDHGIRCMEDTDVVQRLVAEQVPLTV--CPLSNVRLRA-V----------DK---- 259 (343)
T ss_dssp HHHHHHHTSC----------C-SEEEECGGGGGCHHHHHHHHHHTCCEEE--CHHHHHHTTS-S----------SC----
T ss_pred HHHHHHhcCC----------c-ceeeeeeeecCChHHHHHHHhcCCCeeE--chhHHHHhCC-C----------CC----
Confidence 2333333221 1 1356665432335677777777876655 7765433211 0 00
Q ss_pred hhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHH
Q 013050 291 ANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKL 369 (450)
Q Consensus 291 ~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~gls~~~al~~aT~~~A~~ 369 (450)
....++.++++.|++++++||....... .+...+.. ....|++++++ +..|.|+.++
T Consensus 260 ~~~hPi~~ll~~Gv~V~l~TDdp~~~~~---------------------~l~~E~~~a~~~~~l~~~~l-~~l~~nsi~~ 317 (343)
T 3rys_A 260 LADHPLPEMLAIGLNVCVNSDDPAYFGG---------------------YVDDNFEQLVKVLEFSVPEQ-ATLAANSIRS 317 (343)
T ss_dssp GGGCSHHHHHHTTCCEEECCBSTTTTTC---------------------CHHHHHHHHHHHHCCCHHHH-HHHHHHHHHH
T ss_pred cccchHHHHHHCCCeEEEeCCCccccCC---------------------CHHHHHHHHHHHcCCCHHHH-HHHHHHHHHH
Confidence 0112356778899999999996533211 12223333 34469999995 7778999988
Q ss_pred hCC
Q 013050 370 AGQ 372 (450)
Q Consensus 370 lg~ 372 (450)
..+
T Consensus 318 sf~ 320 (343)
T 3rys_A 318 SFA 320 (343)
T ss_dssp SSS
T ss_pred HCC
Confidence 766
No 97
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=97.60 E-value=0.00071 Score=62.94 Aligned_cols=160 Identities=13% Similarity=0.043 Sum_probs=92.6
Q ss_pred cCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHH
Q 013050 131 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEA 210 (450)
Q Consensus 131 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 210 (450)
.++.|+....... +.|....+.+.++++.|++.|+++.+|+.+... .+
T Consensus 172 ~~vvG~dL~g~E~---~~~~~~~~~f~~~f~~A~~~gl~~~~HagE~~~-----------------------------~~ 219 (367)
T 3iar_A 172 QTVVAIDLAGDET---IPGSSLLPGHVQAYQEAVKSGIHRTVHAGEVGS-----------------------------AE 219 (367)
T ss_dssp TTEEEEEEESCTT---STTGGGCHHHHHHHHHHHHHTCEEEEEESSSSC-----------------------------HH
T ss_pred CCEEEEcCCCccc---CCCcchHHHHHHHHHHHHHcCCeeEEecCCcCC-----------------------------hH
Confidence 5677776643211 111111268899999999999999999954321 11
Q ss_pred HHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCCh
Q 013050 211 AIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA 290 (450)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (450)
.+..++..+ +. -.+.|+....+..+.++.+++.++.+.+ ||........ .+.+
T Consensus 220 ~i~~al~~l----------g~-~RIgHgv~l~~d~~l~~~l~~~~i~le~--cP~SN~~l~~-----------~~~~--- 272 (367)
T 3iar_A 220 VVKEAVDIL----------KT-ERLGHGYHTLEDQALYNRLRQENMHFEI--CPWSSYLTGA-----------WKPD--- 272 (367)
T ss_dssp HHHHHHHTS----------CC-SEEEECGGGGGCHHHHHHHHHTTCEEEE--CHHHHHHTSS-----------SCTT---
T ss_pred HHHHHHHcc----------CC-ceeeeeeeecCCHHHHHHHHhCCcEEEE--CHHHHHHhCC-----------CCCc---
Confidence 222223221 11 1356665432445677888888866554 8865433211 0111
Q ss_pred hhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHH-HhcCCCHHHHHHHHhhchhHH
Q 013050 291 ANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKL 369 (450)
Q Consensus 291 ~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~gls~~~al~~aT~~~A~~ 369 (450)
....+..+++.|++++++||..... +. .+...+..+ ...|+++++ ++..|.|++++
T Consensus 273 -~~hPi~~ll~~Gv~v~l~TDdp~~~----------------~~-----~l~~e~~~a~~~~glt~~e-l~~l~~nsi~~ 329 (367)
T 3iar_A 273 -TEHAVIRLKNDQANYSLNTDDPLIF----------------KS-----TLDTDYQMTKRDMGFTEEE-FKRLNINAAKS 329 (367)
T ss_dssp -SCCHHHHHHHTTCCEEECCBSHHHH----------------TC-----CHHHHHHHHHHHHCCCHHH-HHHHHHHHHHT
T ss_pred -ccChHHHHHHCCCEEEECCCCcccc----------------CC-----CHHHHHHHHHHHcCCCHHH-HHHHHHHHHHH
Confidence 1124667788999999999953211 10 133333333 456999999 66778999887
Q ss_pred hCC
Q 013050 370 AGQ 372 (450)
Q Consensus 370 lg~ 372 (450)
..+
T Consensus 330 sf~ 332 (367)
T 3iar_A 330 SFL 332 (367)
T ss_dssp SSS
T ss_pred hCC
Confidence 665
No 98
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=97.34 E-value=0.00032 Score=64.28 Aligned_cols=157 Identities=16% Similarity=0.065 Sum_probs=90.9
Q ss_pred cCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHH
Q 013050 131 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEA 210 (450)
Q Consensus 131 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 210 (450)
.++.++...... ...+++.+.++++.|++.|+++.+|+.+... ..
T Consensus 160 ~~vvG~dL~g~E------~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~-----------------------------~~ 204 (326)
T 3pao_A 160 DAFIAVGLDSSE------VGHPPSKFQRVFDRARSEGFLTVAHAGEEGP-----------------------------PE 204 (326)
T ss_dssp GGCSEEEEESCC------TTCCGGGGHHHHHHHHHTTCEECEEESSSSC-----------------------------HH
T ss_pred ccceeeCCCCCC------CCCCHHHHHHHHHHHHHcCCceeeecCCCCC-----------------------------HH
Confidence 367777664321 1245678889999999999999999954321 11
Q ss_pred HHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCCh
Q 013050 211 AIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA 290 (450)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (450)
.+..+++.+.. .. +.|+....+..+.++.+++.++.+.+ ||........ .+.+
T Consensus 205 ~i~~al~~lg~--------~r---igHgv~l~~d~~l~~~l~~~~i~le~--cP~SN~~l~~-----------~~~~--- 257 (326)
T 3pao_A 205 YIWEALDLLKV--------ER---IDHGVRAFEDERLMRRLIDEQIPLTV--CPLSNTKLCV-----------FDDM--- 257 (326)
T ss_dssp HHHHHHHTTCC--------SS---EEECGGGGGCHHHHHHHHHHTCCEEE--CHHHHHHTTS-----------SSSG---
T ss_pred HHHHHHhcCCC--------ce---eeeeeeecccHHHHHHHHHcCCeEEE--CchhHHHhCC-----------CCCc---
Confidence 23333332211 22 45655432335567777777776665 7765433211 0000
Q ss_pred hhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHH
Q 013050 291 ANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKL 369 (450)
Q Consensus 291 ~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~gls~~~al~~aT~~~A~~ 369 (450)
...++.++++.|++++++||....+.. .+...+.. ....|+++++ ++..|.|++++
T Consensus 258 -~~hPi~~ll~~Gv~V~l~TDdp~~~~~---------------------~l~~e~~~a~~~~~l~~~~-l~~l~~nsi~~ 314 (326)
T 3pao_A 258 -SQHTILDMLERGVKVTVNSDDPAYFGG---------------------YVTENFHALQQSLGMTEEQ-ARRLAQNSLDA 314 (326)
T ss_dssp -GGCCHHHHHHHTCCEEECCBSHHHHTC---------------------CHHHHHHHHHHHHCCCHHH-HHHHHHHHHHT
T ss_pred -ccChHHHHHHCCCeEEEeCCCcccCCC---------------------CHHHHHHHHHHHcCCCHHH-HHHHHHHHHHH
Confidence 112356778889999999995322110 12233333 3446999999 57888998876
Q ss_pred hCC
Q 013050 370 AGQ 372 (450)
Q Consensus 370 lg~ 372 (450)
.-+
T Consensus 315 sf~ 317 (326)
T 3pao_A 315 RLV 317 (326)
T ss_dssp CC-
T ss_pred HHh
Confidence 544
No 99
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=96.97 E-value=0.046 Score=49.25 Aligned_cols=231 Identities=10% Similarity=0.039 Sum_probs=124.1
Q ss_pred hHHHHHHHHhCCceEEEeCCCCCCCC--CCcHHHHHHHHHHHhcCCceEEEEeccccCCC-ccchHHHHHHHHcCCcEEE
Q 013050 61 FPSGTKAAAAGGITTLIDMPLNSDPS--TISTETLKLKVDAAEKRIYVDVGFWGGLVPEN-AYNASALEALLNAGVLGLK 137 (450)
Q Consensus 61 ~~~~~~~~~~~GvT~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~ 137 (450)
.....+.+.+.||...+..+ ...+. ....+.+....+.... ++....++.+.. ....++++++.+.|+.+++
T Consensus 49 ~e~~l~~md~~GV~~~V~~~-~~~~~~~~~~N~~~~~~~~~~p~----r~~~~~~v~p~~~~~a~~eL~~~~~~g~~Gi~ 123 (291)
T 3irs_A 49 LELMFEEMAAAGIEQGVCVG-RNSSVLGSVSNADVAAVAKAYPD----KFHPVGSIEAATRKEAMAQMQEILDLGIRIVN 123 (291)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-CEETTTEECCHHHHHHHHHHSTT----TEEEEEECCCSSHHHHHHHHHHHHHTTCCCEE
T ss_pred HHHHHHHHHHCCCCEEEEcC-CCccccccccHHHHHHHHHHCCC----cEEEEEecCccCHHHHHHHHHHHHhCCCeEEE
Confidence 45556678889999887764 21110 0222233333222211 122223333333 3445677776678999999
Q ss_pred EecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHHHHHHHHH
Q 013050 138 SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLT 217 (450)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 217 (450)
....+.+. ....+.+.+...++.|.++|++|.+|...... +.. ....| ..+..
T Consensus 124 ~~~~~~~~--~~~~~d~~~~~~~~~a~e~glpv~iH~~~~~~-------------~~~----~~~~p--------~~~~~ 176 (291)
T 3irs_A 124 LEPGVWAT--PMHVDDRRLYPLYAFCEDNGIPVIMMTGGNAG-------------PDI----TYTNP--------EHIDR 176 (291)
T ss_dssp ECGGGSSS--CCCTTCGGGHHHHHHHHHTTCCEEEECSSSCS-------------SSG----GGGCH--------HHHHH
T ss_pred EeCCCCCC--CCCCCCHHHHHHHHHHHHcCCeEEEeCCCCCC-------------CCC----ccCCH--------HHHHH
Confidence 87433210 11345678899999999999999999965310 000 00011 23445
Q ss_pred HHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHH
Q 013050 218 VAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLW 297 (450)
Q Consensus 218 l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 297 (450)
++++ +++.++.+.|+... ...+.++.+.+. ..+++.++.... ..+ . ...+.
T Consensus 177 v~~~------~P~l~ivl~H~G~~-~~~~~~~l~~~~-~nvy~~~Sg~~~---------------~~~---~---~~~~~ 227 (291)
T 3irs_A 177 VLGD------FPDLTVVSSHGNWP-WVQEIIHVAFRR-PNLYLSPDMYLY---------------NLP---G---HADFI 227 (291)
T ss_dssp HHHH------CTTCCEEEEGGGTT-CHHHHHHHHHHC-TTEEEECGGGGS---------------SST---T---HHHHH
T ss_pred HHHH------CCCCEEEeecCCcc-cHHHHHHHHhHC-CCeEecHHHHhc---------------cCC---C---HHHHH
Confidence 5554 45888888998764 333344433222 235655433210 001 0 11222
Q ss_pred HHHhc-CC-eeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC-CC
Q 013050 298 EALMD-GH-IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ-VS 374 (450)
Q Consensus 298 ~~~~~-g~-~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg~-~~ 374 (450)
+.++. |. .+++|||+ |.... ......+.+.++|.++.-+..+.|+++++++ .+
T Consensus 228 ~~~~~~g~drllfgSD~-P~~~~-----------------------~~~~~~~~~l~l~~e~~~~i~~~NA~rl~~~~~~ 283 (291)
T 3irs_A 228 QAANSFLADRMLFGTAY-PMCPL-----------------------KEYTEWFLTLPIKPDAMEKILHGNAERLLAQAGR 283 (291)
T ss_dssp HHHTTGGGGTBCCCCCB-TSSCH-----------------------HHHHHHHHTSSCCHHHHHHHHTHHHHHHHHHSCC
T ss_pred HHHHHhCcceEEEecCC-CCCCH-----------------------HHHHHHHHHCCCCHHHHHHHHHHHHHHHhCcccc
Confidence 33321 21 35689994 44211 1123344556899999999999999999998 44
Q ss_pred CC
Q 013050 375 KG 376 (450)
Q Consensus 375 ~G 376 (450)
-|
T Consensus 284 ~~ 285 (291)
T 3irs_A 284 EG 285 (291)
T ss_dssp --
T ss_pred cc
Confidence 34
No 100
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=96.73 E-value=0.023 Score=51.76 Aligned_cols=52 Identities=15% Similarity=0.296 Sum_probs=39.5
Q ss_pred chHHHHHHHH-cCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 013050 121 NASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 176 (450)
Q Consensus 121 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 176 (450)
..++++++++ .|..|++.+....+ ...+.+.+..+++.+.++|++|.+|...
T Consensus 112 a~~el~r~~~~~G~~Gv~l~~~~~~----~~l~d~~~~p~~~~~~e~g~pv~iH~g~ 164 (312)
T 3ij6_A 112 ACKVISSIKDDENLVGAQIFTRHLG----KSIADKEFRPVLAQAAKLHVPLWMHPVF 164 (312)
T ss_dssp HHHHHHHHHHCTTEEEEEEESEETT----EETTSTTTHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHHHHHHhCCCceEeccCCCCC----CCCCCccHHHHHHHHHHcCCeEEEcCCC
Confidence 4677888865 79999988654322 2345677889999999999999999943
No 101
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=95.88 E-value=0.054 Score=50.54 Aligned_cols=161 Identities=13% Similarity=0.036 Sum_probs=89.9
Q ss_pred cCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHHHH
Q 013050 131 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEA 210 (450)
Q Consensus 131 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 210 (450)
.++.|+....... ..+++.+.+.++.|++.|+++.+|+.+... | .+
T Consensus 180 ~~VvG~dL~g~E~------~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~------------------------p----~~ 225 (380)
T 4gxw_A 180 DEVAGIGIDYREN------DRPPELFWKAYRDARAAGFRTTAHAGEFGM------------------------P----WR 225 (380)
T ss_dssp TTBCEEEEESCCT------TCCGGGGHHHHHHHHHTTCEEEEEESCTTC------------------------C----HH
T ss_pred CCEEEEeecCCCC------CCCHHHHHHHHHHHHHcCCCeeeeccccCC------------------------c----hH
Confidence 4677776632111 234567889999999999999999954321 1 12
Q ss_pred HHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCCh
Q 013050 211 AIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA 290 (450)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (450)
.+..+++++. - -.+.|.....+..+.++.+++.++++.+ ||....... ..+. ...
T Consensus 226 ~i~~al~~lg---------a--~RIgHG~~~~~d~~L~~~l~~~~I~lEv--CP~SN~~l~-----------~v~~-~~~ 280 (380)
T 4gxw_A 226 NVETAVDLLH---------V--DRVDHGYTIVDNPELCARYAERGIVFTV--VPTNSYYLR-----------TLPP-DQW 280 (380)
T ss_dssp HHHHHHHTSC---------C--SEEEECGGGGGCHHHHHHHHHHTCEEEE--CTTCHHHHH-----------HSCT-TTH
T ss_pred HHHHHHHHcC---------C--cccccceeeccChHHHHHHHHhCceeEE--CCcchhhhc-----------cccc-ccc
Confidence 2444444322 1 2344554332556677777777765554 775432211 1110 000
Q ss_pred hhHHHHHHHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHH-HHhcCCCHHHHHHHHhhchhHH
Q 013050 291 ANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSY-GRKYGVTLEQLASWWSERPAKL 369 (450)
Q Consensus 291 ~~~~~l~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~gls~~~al~~aT~~~A~~ 369 (450)
....++...++.|++++++||..... +. .+...+.. ....|++.+++.+ .+.|+.++
T Consensus 281 ~~~HP~~~l~~~Gv~vtinTDDp~~f----------------~t-----~Ls~Ey~~~~~~~gls~~dl~~-l~~nsi~~ 338 (380)
T 4gxw_A 281 AERHPMRKMPGLGLKIHPNTDDPTLH----------------KV-----NPSEAWELMFSHFGFTIADLKQ-FMLNGIDG 338 (380)
T ss_dssp HHHCGGGGTGGGTCEEEECCBSHHHH----------------TC-----CHHHHHHHHHHTSCCCHHHHHH-HHHHHHHH
T ss_pred cccChHHHHHHCCCeEEECCCCchhh----------------CC-----CHHHHHHHHHHHhCcCHHHHHH-HHHHHHHH
Confidence 11123456688999999999953110 11 13333333 3567999999664 45777665
Q ss_pred hCC
Q 013050 370 AGQ 372 (450)
Q Consensus 370 lg~ 372 (450)
.-+
T Consensus 339 sF~ 341 (380)
T 4gxw_A 339 AWV 341 (380)
T ss_dssp SSS
T ss_pred HcC
Confidence 544
No 102
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=95.73 E-value=0.086 Score=48.47 Aligned_cols=110 Identities=12% Similarity=0.035 Sum_probs=64.1
Q ss_pred HHHHHHHHhCCceEEEeCCCCCC--CCCCcHH-------HHHHHHHHHhcCCceEEEEeccccCCCc-cchHHHHHHHHc
Q 013050 62 PSGTKAAAAGGITTLIDMPLNSD--PSTISTE-------TLKLKVDAAEKRIYVDVGFWGGLVPENA-YNASALEALLNA 131 (450)
Q Consensus 62 ~~~~~~~~~~GvT~~~~~~~~~~--~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 131 (450)
....+.+.+.||...+-.+ ... ....... ............-+-++...+.+..... ...++++++.+.
T Consensus 61 ~~~l~~m~~~GV~~~V~~~-~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~l~~~~~~~a~~el~~~~~~ 139 (334)
T 2hbv_A 61 AFRIEEMDAQGVDVQVTCA-TPVMFGYTWEANKAAQWAERMNDFALEFAAHNPQRIKVLAQVPLQDLDLACKEASRAVAA 139 (334)
T ss_dssp HHHHHHHHHHTCSEEEEEE-CGGGCCTTSCHHHHHHHHHHHHHHHHHHHTTCTTTEEECBCCCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECC-CchhccCCCCHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEecCccCHHHHHHHHHHHHHc
Confidence 4556677888998876654 210 0011111 1111112222222223333444444332 356777777778
Q ss_pred CCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 013050 132 GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 176 (450)
Q Consensus 132 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 176 (450)
|+.+++......+ ...+.+.+...++.+.++|++|.+|...
T Consensus 140 g~~Gv~l~~~~~~----~~l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 140 GHLGIQIGNHLGD----KDLDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp TCCCEEEESCBTT----BCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred CCeEEEECCCCCC----CCCCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 9999887654322 2356788999999999999999999964
No 103
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=95.35 E-value=0.066 Score=49.28 Aligned_cols=109 Identities=14% Similarity=-0.028 Sum_probs=62.2
Q ss_pred HHHHHHHHhCCceEEEeCCCCCCC--CCCcHH-------H-HHHHHHHHhcCCceEEEEeccccCCCc-cchHHHHHHHH
Q 013050 62 PSGTKAAAAGGITTLIDMPLNSDP--STISTE-------T-LKLKVDAAEKRIYVDVGFWGGLVPENA-YNASALEALLN 130 (450)
Q Consensus 62 ~~~~~~~~~~GvT~~~~~~~~~~~--~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 130 (450)
....+.+.+.||...+..+ .... ...... . -....+..... +-++...+.+..... ...++++++.+
T Consensus 57 ~~~l~~m~~~GV~~~v~~~-~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~-p~r~~~~~~l~~~~~~~a~~el~~~~~ 134 (336)
T 2wm1_A 57 EVRIREMDQKGVTVQALST-VPVMFSYWAKPEDTLNLCQLLNNDLASTVVSY-PRRFVGLGTLPMQAPELAVKEMERCVK 134 (336)
T ss_dssp HHHHHHHHHHTCCEEEEEC-CGGGGCTTSCHHHHHHHHHHHHHHHHHHHHHS-TTTEEEEECCCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECC-CchhhcccCCHHHHHHHHHHHHHHHHHHHHhc-cCceeEEEeCCCcCHHHHHHHHHHHHH
Confidence 4556677889999877654 2100 001111 1 11112222221 212333333433332 34677888774
Q ss_pred -cCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 013050 131 -AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 176 (450)
Q Consensus 131 -~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 176 (450)
.|+.+++......+ ...+.+.+...++.+.++|++|.+|...
T Consensus 135 ~~g~~Gv~l~~~~~~----~~l~d~~~~~~~~~~~e~~lpv~iH~~~ 177 (336)
T 2wm1_A 135 ELGFPGVQIGTHVNE----WDLNAQELFPVYAAAERLKCSLFVHPWD 177 (336)
T ss_dssp TSCCSEEEEESEETT----EETTCGGGHHHHHHHHHHTCEEEEECCS
T ss_pred ccCCeEEEECCcCCC----CCCCCccHHHHHHHHHHcCCEEEECCCC
Confidence 69999987543322 1356678899999999999999999964
No 104
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=95.13 E-value=1.2 Score=41.34 Aligned_cols=66 Identities=15% Similarity=0.265 Sum_probs=45.9
Q ss_pred EEEeccccCCCc-cchHHHHHHHHc-CCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCh
Q 013050 108 VGFWGGLVPENA-YNASALEALLNA-GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME 177 (450)
Q Consensus 108 ~~~~~~~~~~~~-~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 177 (450)
+...+.+..... ...++++++.+. |+.+++.+....+ ...+.+.+..+++.+.++|++|.+|....
T Consensus 147 f~g~a~v~~~~~~~a~~EL~r~~~~~G~~Gv~l~~~~~g----~~l~d~~~~pi~~~~~e~g~pV~iH~g~~ 214 (373)
T 4inf_A 147 FIGMGTVAPQDPEWSAREIHRGARELGFKGIQINSHTQG----RYLDEEFFDPIFRALVEVDQPLYIHPATS 214 (373)
T ss_dssp EEECBCCCTTSHHHHHHHHHHHHHTSCCCCEEECSCBTT----BCTTSGGGHHHHHHHHHHTCCEEECCCCC
T ss_pred EEEEEecCCCCHHHHHHHHHHHHhhcCceEEEECCCCCC----CCCCCcchHHHHHHHHHcCCeEEECCCCC
Confidence 444444444333 246778888875 9999997643322 23566788999999999999999999653
No 105
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=94.40 E-value=0.087 Score=52.86 Aligned_cols=99 Identities=13% Similarity=0.001 Sum_probs=56.9
Q ss_pred EecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHhcCCeeEEcCCCCCC
Q 013050 236 VHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT 315 (450)
Q Consensus 236 ~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gtD~~~~ 315 (450)
.|+....+....++.+++.++.+.+ ||...... ...+ ....+..+++.|+.++++||....
T Consensus 542 gHGv~l~edp~Li~lla~~~I~vev--CP~SN~kl-------------~~~~----~~HPi~~ll~~Gv~VsLgTDdp~~ 602 (701)
T 2a3l_A 542 AHGINLRKSPVLQYLYYLAQIGLAM--SPLSNNSL-------------FLDY----HRNPFPVFFLRGLNVSLSTDDPLQ 602 (701)
T ss_dssp SCCGGGGGCHHHHHHHHHHTCCEEE--CHHHHTTT-------------TCCS----TTCSHHHHHHTTCCEEECCBCHHH
T ss_pred EEEeecccCHHHHHHHHHcCCcEEE--Cccchhhh-------------ccCc----hHhHHHHHHHCCCcEEEeCCCccc
Confidence 3443322444456667777776665 77654311 0001 111355678899999999996433
Q ss_pred ChhhhcccCCCccccCCCCcchhhHHHHHHH-HHHhcCCCHHHHHHHHhhchhHHhCC
Q 013050 316 VPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYGVTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 316 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~gls~~~al~~aT~~~A~~lg~ 372 (450)
+...+ ..+...+. .....+++..++.++ |.|++++.++
T Consensus 603 ~~~t~------------------~dL~~Ey~~aa~~~~ls~~dl~~l-a~Ns~~asfl 641 (701)
T 2a3l_A 603 IHLTK------------------EPLVEEYSIAASVWKLSACDLCEI-ARNSVYQSGF 641 (701)
T ss_dssp HCCSS------------------SHHHHHHHHHHHHHTCCHHHHHHH-HHHHHHHSCC
T ss_pred cCCCC------------------cCHHHHHHHHHHHcCCCHHHHHHH-HHHHHHHhCC
Confidence 11100 01222222 234458999997777 9999999997
No 106
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=93.80 E-value=0.29 Score=47.26 Aligned_cols=124 Identities=19% Similarity=0.123 Sum_probs=69.7
Q ss_pred cCCcEEEEecccCCCCCCCCCCHHHHHHHHHH--HHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccCCCChHHH
Q 013050 131 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSV--LARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWE 208 (450)
Q Consensus 131 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 208 (450)
.++.|+....... ...+.+.+...++. |++.|+++.+|+.+... .+. ..+
T Consensus 291 ~~VvG~DLaG~E~-----~g~p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~-----------~g~--------~~~---- 342 (508)
T 3lgd_A 291 TVVAGFDLVGHED-----TGHSLHDYKEALMIPAKDGVKLPYFFHAGETDW-----------QGT--------SID---- 342 (508)
T ss_dssp TTEEEEEEESCTT-----TSCCTGGGHHHHTHHHHTTCCCCBCCEECCSSC-----------CSS--------TTT----
T ss_pred CceEEeccCCCCC-----CCCCHHHHHHHHHHHHHHHcCCceeeecccccC-----------CCC--------CcH----
Confidence 4577776632111 11235667777887 88999999999955321 000 001
Q ss_pred HHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcchhcccccccCCCCCceEEcCCCC
Q 013050 209 EAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIR 288 (450)
Q Consensus 209 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (450)
+.+..++.+.. . .+.|+....+..+.++.+++.++.+.+ ||........- +.
T Consensus 343 -~~i~~Al~Lga---------~---RIgHGv~l~~dp~l~~~l~~~~I~lev--CP~SN~~l~~v-----------~~-- 394 (508)
T 3lgd_A 343 -RNILDALMLNT---------T---RIGHGFALSKHPAVRTYSWKKDIPIEV--CPISNQVLKLV-----------SD-- 394 (508)
T ss_dssp -THHHHHHHTTC---------S---SEEECTTGGGCHHHHHHHHHTTCCEEE--CHHHHHHTTSC-----------SS--
T ss_pred -HHHHHHHhcCC---------c---eeeeeEecCccHHHHHHHHhcCCeEEE--CcchHHHhCCC-----------CC--
Confidence 12333442211 2 245665542446778888888877666 77654432110 00
Q ss_pred ChhhHHHHHHHHhcCCeeEEcCCC
Q 013050 289 DAANKEKLWEALMDGHIDMLSSDH 312 (450)
Q Consensus 289 ~~~~~~~l~~~~~~g~~~~~gtD~ 312 (450)
....++..+++.|++++++||.
T Consensus 395 --~~~hP~~~ll~~Gv~V~l~TDd 416 (508)
T 3lgd_A 395 --LRNHPVATLMATGHPMVISSDD 416 (508)
T ss_dssp --GGGCTHHHHHHTTCCEEECCBS
T ss_pred --cccChHHHHHHCCCcEEEcCCC
Confidence 1112356778899999999995
No 107
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=92.51 E-value=0.76 Score=42.49 Aligned_cols=66 Identities=11% Similarity=0.074 Sum_probs=45.3
Q ss_pred EEEeccccCCCc-cchHHHHHHH-HcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCh
Q 013050 108 VGFWGGLVPENA-YNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME 177 (450)
Q Consensus 108 ~~~~~~~~~~~~-~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 177 (450)
+...+.+..... ...+++++++ +.|+.+++....+.+ ...+.+.+..+++.+.++|++|.+|....
T Consensus 129 f~g~a~v~~~~~~~a~~El~r~~~~~G~~Gv~l~~~~~~----~~~~d~~~~p~~~~~~e~g~pV~iH~g~~ 196 (357)
T 3nur_A 129 FVGFATLPINEPEAAAREFERCINDLGFKGALIMGRAQD----GFLDQDKYDIIFKTAENLDVPIYLHPAPV 196 (357)
T ss_dssp EEECBCCCTTSHHHHHHHHHHHHHTTCCCCEEEESCBTT----BCTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhhcCceEEEeCCCCCC----CCCCCccHHHHHHHHHhcCCeEEEecCCC
Confidence 344443433332 3567788865 589999998743321 13566788899999999999999999653
No 108
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=91.30 E-value=7 Score=34.13 Aligned_cols=38 Identities=32% Similarity=0.476 Sum_probs=26.6
Q ss_pred ceeeccccCCC---CCCcccchHHHHHHHHhCCceEEEeCC
Q 013050 43 LIDVHAHLDDP---GRTEWEGFPSGTKAAAAGGITTLIDMP 80 (450)
Q Consensus 43 ~iD~H~H~~~~---~~~~~~~~~~~~~~~~~~GvT~~~~~~ 80 (450)
+||.|+|.... +....+......+.+.+.|++.+.-.+
T Consensus 1 m~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~~i~~T~ 41 (262)
T 3qy7_A 1 MIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIATP 41 (262)
T ss_dssp CEESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCCEEECCC
T ss_pred CEEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 68999999643 222222233478889999999998765
No 109
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=73.59 E-value=33 Score=33.77 Aligned_cols=36 Identities=14% Similarity=-0.076 Sum_probs=27.3
Q ss_pred ceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCC
Q 013050 43 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMP 80 (450)
Q Consensus 43 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~ 80 (450)
++|.|+|.... ....++....+.+...|++.+.-..
T Consensus 328 ~~DlH~HT~~S--DG~~t~eemv~~A~~~Gl~~IaiTD 363 (578)
T 2w9m_A 328 RGMIHTHSTWS--DGGASIREMAEATLTLGHEFLGTAD 363 (578)
T ss_dssp CEEEEECCTTT--TCSSCHHHHHHHHHHTTCSEEEECE
T ss_pred ceEEEecCCcc--CCCCCHHHHHHHHHHCCCeEEEEcC
Confidence 58999998655 2334577888899999999876653
No 110
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=71.47 E-value=2.6 Score=36.48 Aligned_cols=40 Identities=23% Similarity=0.342 Sum_probs=28.2
Q ss_pred ccceeeccccCCC---CCCcccchHHHHHHHHhCCceEEEeCC
Q 013050 41 PGLIDVHAHLDDP---GRTEWEGFPSGTKAAAAGGITTLIDMP 80 (450)
Q Consensus 41 PG~iD~H~H~~~~---~~~~~~~~~~~~~~~~~~GvT~~~~~~ 80 (450)
.|++|.|+|.... +....+......+.+.+.|++.+.-.+
T Consensus 3 ~~m~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~~Td 45 (247)
T 2wje_A 3 MGMIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTS 45 (247)
T ss_dssp -CEEECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEEEEECCC
T ss_pred CCCEEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 4689999999533 222233445688899999999987664
No 111
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=67.65 E-value=24 Score=32.01 Aligned_cols=59 Identities=15% Similarity=0.146 Sum_probs=41.9
Q ss_pred ccchHHHHHHH-HcCCcEEEEecccCCCC-CCCCCCHHHHHHHHHHHHhcCCcEEEecCCh
Q 013050 119 AYNASALEALL-NAGVLGLKSFMCPSGIN-DFPMTNASHIKEGLSVLARYKRPLLVHAEME 177 (450)
Q Consensus 119 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 177 (450)
....++++++. +.|+.+++......+.. .......+.+...++.|.++|++|.+|....
T Consensus 122 ~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~~~~ 182 (350)
T 2gwg_A 122 KTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVSTS 182 (350)
T ss_dssp GGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCCC-
T ss_pred HHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECCCCC
Confidence 34577888888 57999997754322100 0123566889999999999999999999643
No 112
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=66.80 E-value=29 Score=32.59 Aligned_cols=116 Identities=10% Similarity=-0.063 Sum_probs=68.1
Q ss_pred hHHHHHHHHhCCceEEEeCCCCCCC-----CCCcHHH----HHHHHHHHh---c-CCc-eEEEEeccccCCCc-cchHHH
Q 013050 61 FPSGTKAAAAGGITTLIDMPLNSDP-----STISTET----LKLKVDAAE---K-RIY-VDVGFWGGLVPENA-YNASAL 125 (450)
Q Consensus 61 ~~~~~~~~~~~GvT~~~~~~~~~~~-----~~~~~~~----~~~~~~~~~---~-~~~-~~~~~~~~~~~~~~-~~~~~~ 125 (450)
.....+.+-+.||...+-.+ .... .....+. .....+... . ..+ -++...+.+..... ...+++
T Consensus 103 ~e~rl~~MD~~GId~~Vl~p-~~~~~~~~~~~~d~e~a~~~~r~~Nd~lae~~~~~~P~~Rf~g~a~v~~~d~~~a~~EL 181 (423)
T 4dzi_A 103 RDARIAVMDEQDIETAFMLP-TFGCGVEEALKHDIEATMASVHAFNLWLDEDWGFDRPDHRIIAAPIVSLADPTRAVEEV 181 (423)
T ss_dssp HHHHHHHHHHHTEEEEEEEC-SGGGGHHHHTTTCHHHHHHHHHHHHHHHHHHTCSSCTTCCEEECCBCCCSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEECC-CchhhccccccCCHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEEeCCccCHHHHHHHH
Confidence 55567788889999877654 2110 0112211 111222211 1 223 34555544443333 356788
Q ss_pred HHHHHcCCcEEEEecccC-CCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCCh
Q 013050 126 EALLNAGVLGLKSFMCPS-GINDFPMTNASHIKEGLSVLARYKRPLLVHAEME 177 (450)
Q Consensus 126 ~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 177 (450)
+++.+.|+.+++....+. +..+....+.+.+..+++.+.++|++|.+|....
T Consensus 182 ~r~~~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~g~~ 234 (423)
T 4dzi_A 182 DFVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDS 234 (423)
T ss_dssp HHHHHTTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHHHcCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeCCCC
Confidence 888889999998753221 1112234566788999999999999999999653
No 113
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=65.85 E-value=77 Score=29.10 Aligned_cols=22 Identities=18% Similarity=-0.004 Sum_probs=18.0
Q ss_pred cCCCHHH-----HHHHHhhchhHHhCC
Q 013050 351 YGVTLEQ-----LASWWSERPAKLAGQ 372 (450)
Q Consensus 351 ~gls~~~-----al~~aT~~~A~~lg~ 372 (450)
.+++.++ .-+....|+++++++
T Consensus 344 ~~ls~~~~~~~~~~~I~~~NA~rlf~l 370 (376)
T 2qpx_A 344 LPFVDLAQKKAWINAICWQTSAKLYHQ 370 (376)
T ss_dssp CSSCCHHHHHHHHHHHHTHHHHHHTTC
T ss_pred cCcchhhcCHHHHHHHHHHhHHHHhCC
Confidence 4777666 778888999999998
No 114
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=60.91 E-value=14 Score=30.87 Aligned_cols=55 Identities=15% Similarity=-0.037 Sum_probs=39.4
Q ss_pred HHHhcCCeeEEcCCCCCCChhhhcccCCCccccCCCCcchhhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 013050 298 EALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 298 ~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg~ 372 (450)
...+.|+.++++||........ .......++...|++.++++.+.|.+|.+++..
T Consensus 155 l~k~~g~~ivisSDAh~~~~v~--------------------~~~~~~~l~~~~G~~~e~~~~~l~~~~~~i~~~ 209 (212)
T 1v77_A 155 LVEKYKVRRFLTSSAQEKWDVR--------------------YPRDLISLGVVIGMEIPQAKASISMYPEIILKR 209 (212)
T ss_dssp HHHHHTCCEEEECCCSSGGGCC--------------------CHHHHHHHHHHTTCCHHHHHHTTTHHHHHHHC-
T ss_pred HHHhcCCCEEEeCCCCChhhcC--------------------CHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Confidence 3445699999999975321110 133445667889999999999999999998865
No 115
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=60.49 E-value=52 Score=29.20 Aligned_cols=108 Identities=11% Similarity=0.056 Sum_probs=61.4
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCc
Q 013050 59 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVL 134 (450)
Q Consensus 59 ~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 134 (450)
+.+....+.++.+|+..++..+...+...-+.+.-.. ..+....+.++-.+. ......+..+..+...+.|+.
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---g~~~t~~ai~la~~A~~~Gad 109 (301)
T 1xky_A 33 AKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT---GSNNTHASIDLTKKATEVGVD 109 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC---CCCCHHHHHHHHHHHHhcCCC
Confidence 4466667788899999998875222322223332222 222333333322222 122334456666777778999
Q ss_pred EEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 135 GLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
++-....+- ...+.+.+.+-++ .|+.-++||.++-
T Consensus 110 avlv~~P~y-----~~~s~~~l~~~f~~va~a~~lPiilYn 145 (301)
T 1xky_A 110 AVMLVAPYY-----NKPSQEGMYQHFKAIAESTPLPVMLYN 145 (301)
T ss_dssp EEEEECCCS-----SCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred EEEEcCCCC-----CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 987754332 1236667666554 4677789999875
No 116
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=56.66 E-value=71 Score=28.30 Aligned_cols=108 Identities=9% Similarity=-0.047 Sum_probs=60.3
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHH----HHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCc
Q 013050 59 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLK----VDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVL 134 (450)
Q Consensus 59 ~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 134 (450)
+.+....+.++.+|+..++..+...+...-+.+..... .+....+.++-.+. ......+..+..+...+.|+.
T Consensus 32 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---g~~~t~~ai~la~~A~~~Gad 108 (303)
T 2wkj_A 32 ASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHV---GCVSTAESQQLAASAKRYGFD 108 (303)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---CCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCCCHHHHHHHHHHHHhCCCC
Confidence 44666677888999999988762223222333322222 22222332222221 122334455666677778999
Q ss_pred EEEEecccCCCCCCCCCCHHHHHHHHHH-HHhcC-CcEEEec
Q 013050 135 GLKSFMCPSGINDFPMTNASHIKEGLSV-LARYK-RPLLVHA 174 (450)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-a~~~g-~~v~~H~ 174 (450)
++-....+- ...+.+.+.+-++. |+.-+ +||.++-
T Consensus 109 avlv~~P~y-----~~~s~~~l~~~f~~va~a~~~lPiilYn 145 (303)
T 2wkj_A 109 AVSAVTPFY-----YPFSFEEHCDHYRAIIDSADGLPMVVYN 145 (303)
T ss_dssp EEEEECCCS-----SCCCHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEecCCCC-----CCCCHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 987764331 12366777765544 66667 9999875
No 117
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=52.80 E-value=1.3e+02 Score=27.51 Aligned_cols=181 Identities=13% Similarity=0.087 Sum_probs=99.6
Q ss_pred chHHHHHHHHcCCcEEEEe-cccCCC-CC-----------CCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhc
Q 013050 121 NASALEALLNAGVLGLKSF-MCPSGI-ND-----------FPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLE 187 (450)
Q Consensus 121 ~~~~~~~~~~~g~~~~~~~-~~~~~~-~~-----------~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~ 187 (450)
.+..++.+.+.|+..+..- .+.... ++ .... .+.=++++++..+.|+.|.+=--+
T Consensus 133 ~l~~L~~~y~lGvR~~~Lthn~~N~~a~~~~~~~~~~~~~~~GL-T~~G~~vV~emnrlGmivDlSH~s----------- 200 (369)
T 1itu_A 133 SLGVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDSEPQSQGL-SPFGQRVVKELNRLGVLIDLAHVS----------- 200 (369)
T ss_dssp CHHHHHHHHHTTEEEEESCSSSCCSSBCBGGGGGTSSCCSSSSB-CHHHHHHHHHHHHHTCEEECTTBC-----------
T ss_pred CHHHHHHHHHcCCeEEEeecccCCcccccccccCCCCcccCCCc-CHhHHHHHHHHHHcCCEEEcCCCC-----------
Confidence 4678888888998766552 111000 00 0112 245678888899999987763211
Q ss_pred cCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCCh-------hHHHHHHHHHHhCCCcEEE
Q 013050 188 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-------SSSLDLLMEAKTNGDSITV 260 (450)
Q Consensus 188 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~-------~~~~~~~~~~~~~g~~v~~ 260 (450)
......+++++ ..|+.++|.+.. .-+-++++.+++.|-.+-+
T Consensus 201 ---------------------~~~~~dvl~~s----------~~PviaSHSn~ral~~h~RNl~De~l~~la~~GGvigv 249 (369)
T 1itu_A 201 ---------------------VATMKATLQLS----------RAPVIFSHSSAYSVCASRRNVPDDVLRLVKQTDSLVMV 249 (369)
T ss_dssp ---------------------HHHHHHHHHHC----------SSCCEESSCCBTTTSCCTTSBCHHHHHHHHHHTCEEEE
T ss_pred ---------------------HHHHHHHHHhc----------CCCEEEeCCChhhcCCCCCCCCHHHHHHHHHcCCeEEE
Confidence 11133344433 456777787531 1234667777666655555
Q ss_pred ecCcchhcccccccCCCCCceEEcCCCCChh-hHHHHHHHHh-cCC-eeEEcCCCCCCChhhhcccCCCccccCCCCcch
Q 013050 261 ETCPHYLAFSAEEIPDGDTRFKCAPPIRDAA-NKEKLWEALM-DGH-IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSL 337 (450)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~-~g~-~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~ 337 (450)
..++.++.-.. . .... ..+.+....+ .|+ ++++|||..... ..+.|+...
T Consensus 250 ~~~~~fl~~~~------------~---~t~~~~~~hi~hi~~~~G~dhVgiGsDfdG~~------------~~p~gl~d~ 302 (369)
T 1itu_A 250 NFYNNYISCTN------------K---ANLSQVADHLDHIKEVAGARAVGFGGDFDGVP------------RVPEGLEDV 302 (369)
T ss_dssp CCCHHHHTSSS------------C---CBHHHHHHHHHHHHHHHCGGGEEECCCTTSCS------------CCCBTCSST
T ss_pred EechhhcCCCC------------C---CCHHHHHHHHHHHHHhhCCCeEEECCCCCCCC------------CCCCCCCCH
Confidence 55555442110 0 0111 1111111111 254 489999963211 111233333
Q ss_pred hhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 013050 338 QFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 338 ~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg~ 372 (450)
. .++.+...+.+.|+|.+++-+++-.|..+++..
T Consensus 303 ~-~~p~l~~~L~~~G~se~~i~ki~g~N~lRvl~~ 336 (369)
T 1itu_A 303 S-KYPDLIAELLRRNWTEAEVKGALADNLLRVFEA 336 (369)
T ss_dssp T-CHHHHHHHHHHTTCCHHHHHHHHTHHHHHHHHH
T ss_pred H-HHHHHHHHHHHcCCCHHHHHHHHhHhHHHHHHH
Confidence 3 366677777889999999999999999999875
No 118
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=50.24 E-value=1.2e+02 Score=26.72 Aligned_cols=111 Identities=14% Similarity=0.098 Sum_probs=63.9
Q ss_pred CcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHc
Q 013050 56 TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNA 131 (450)
Q Consensus 56 ~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (450)
...+.+....+.++.+|+..++..+...+...-+.+.... ..+....+.++-.+. ......+..+..+...+.
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~a~~~ 101 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT---GANNTVEAIALSQAAEKA 101 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC---CCcCHHHHHHHHHHHHHc
Confidence 3445566777888999999998876222322222332222 223333333332221 123344556667777789
Q ss_pred CCcEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 132 GVLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 132 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
|+.++-....+- ...+.+.+.+.++ .|+.-++|+.++-
T Consensus 102 Gadavlv~~P~y-----~~~~~~~l~~~f~~va~a~~lPiilYn 140 (297)
T 3flu_A 102 GADYTLSVVPYY-----NKPSQEGIYQHFKTIAEATSIPMIIYN 140 (297)
T ss_dssp TCSEEEEECCCS-----SCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCEEEECCCCC-----CCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 999987764331 1235566666554 4677799999985
No 119
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=50.20 E-value=1.1e+02 Score=26.07 Aligned_cols=108 Identities=13% Similarity=-0.016 Sum_probs=58.7
Q ss_pred chHHHHHHHHcCCcEEEEecccCCC---CC---CCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCcc
Q 013050 121 NASALEALLNAGVLGLKSFMCPSGI---ND---FPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTR 194 (450)
Q Consensus 121 ~~~~~~~~~~~g~~~~~~~~~~~~~---~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~ 194 (450)
..+.++.+.+.|..++..+...... .+ ....+.+.+.++.+.++++|+.+..+......
T Consensus 24 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~--------------- 88 (262)
T 3p6l_A 24 LTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAE--------------- 88 (262)
T ss_dssp HHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCS---------------
T ss_pred HHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCc---------------
Confidence 4456667777888888775422100 00 11245667777888888888887776521100
Q ss_pred ccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCc
Q 013050 195 SYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCP 264 (450)
Q Consensus 195 ~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~ 264 (450)
..+.+.+.++.+... |.+....|.... .-.+..+.+++.|+.+..+..+
T Consensus 89 -------------~~~~~~~~i~~A~~l-------Ga~~v~~~~~~~-~~~~l~~~a~~~gv~l~~En~~ 137 (262)
T 3p6l_A 89 -------------KSSDWEKMFKFAKAM-------DLEFITCEPALS-DWDLVEKLSKQYNIKISVHNHP 137 (262)
T ss_dssp -------------STTHHHHHHHHHHHT-------TCSEEEECCCGG-GHHHHHHHHHHHTCEEEEECCS
T ss_pred -------------cHHHHHHHHHHHHHc-------CCCEEEecCCHH-HHHHHHHHHHHhCCEEEEEeCC
Confidence 012356677777765 666555554321 2223333345557666665544
No 120
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=49.29 E-value=1.3e+02 Score=26.45 Aligned_cols=110 Identities=12% Similarity=0.093 Sum_probs=62.4
Q ss_pred cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHh----cCCceEEEEeccccCCCccchHHHHHHHHcC
Q 013050 57 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE----KRIYVDVGFWGGLVPENAYNASALEALLNAG 132 (450)
Q Consensus 57 ~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 132 (450)
.++.+....+.++.+|+..++..+...+...-+.+......+... .+.++-.+. ......+..+..+...+.|
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---g~~~t~~ai~la~~A~~~G 98 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV---LVDSIEDAADQSAEALNAG 98 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE---CCSSHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---CCccHHHHHHHHHHHHhcC
Confidence 344566777788999999998876223322333333333333322 222222221 1223344566667777789
Q ss_pred CcEEEEecccCCCCCCCC-CCHHHHHHHHHH-HHhc---CCcEEEec
Q 013050 133 VLGLKSFMCPSGINDFPM-TNASHIKEGLSV-LARY---KRPLLVHA 174 (450)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~-a~~~---g~~v~~H~ 174 (450)
+.++-....+- .. .+.+.+.+.++. |+.- ++|+.++-
T Consensus 99 adavlv~~P~y-----~~~~s~~~l~~~f~~va~a~p~~~lPiilYn 140 (294)
T 3b4u_A 99 ARNILLAPPSY-----FKNVSDDGLFAWFSAVFSKIGKDARDILVYN 140 (294)
T ss_dssp CSEEEECCCCS-----SCSCCHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred CCEEEEcCCcC-----CCCCCHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 99987754321 12 366777765554 6666 89999875
No 121
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=48.84 E-value=65 Score=28.79 Aligned_cols=109 Identities=18% Similarity=0.214 Sum_probs=63.0
Q ss_pred cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHH----HHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcC
Q 013050 57 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 132 (450)
Q Consensus 57 ~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 132 (450)
..+.+....+.++.+|+..++..+...+...-+.+.- +...+....+.++-.+. + ....+..+..+...+.|
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv--g--~~t~~ai~la~~A~~~G 106 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGI--G--YATSTAIELGNAAKAAG 106 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE--C--SSHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe--C--cCHHHHHHHHHHHHhcC
Confidence 3345667777889999999987752222222223222 22233333343333332 2 24445566667777789
Q ss_pred CcEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 133 VLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
+.++-....+- ...+.+.+.+-++ .|+.-++||.++-
T Consensus 107 adavlv~~P~y-----~~~s~~~l~~~f~~va~a~~lPiilYn 144 (316)
T 3e96_A 107 ADAVMIHMPIH-----PYVTAGGVYAYFRDIIEALDFPSLVYF 144 (316)
T ss_dssp CSEEEECCCCC-----SCCCHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred CCEEEEcCCCC-----CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 99988754331 1346666666554 4666789999976
No 122
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=48.38 E-value=9.2 Score=20.32 Aligned_cols=22 Identities=5% Similarity=-0.053 Sum_probs=18.9
Q ss_pred CCHHHHHHHHHHHHhcCCcEEE
Q 013050 151 TNASHIKEGLSVLARYKRPLLV 172 (450)
Q Consensus 151 ~~~~~l~~~~~~a~~~g~~v~~ 172 (450)
-++++++++.+.|++.++.|..
T Consensus 12 gtpeelkklkeeakkanirvtf 33 (36)
T 2ki0_A 12 GTPEELKKLKEEAKKANIRVTF 33 (36)
T ss_dssp CCHHHHHHHHHHHHHHCCCCCB
T ss_pred CCHHHHHHHHHHHHhccEEEEe
Confidence 4789999999999999988754
No 123
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=47.28 E-value=1.5e+02 Score=26.01 Aligned_cols=111 Identities=8% Similarity=-0.035 Sum_probs=63.9
Q ss_pred cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCcEE
Q 013050 57 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGL 136 (450)
Q Consensus 57 ~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 136 (450)
.++.+....+.++.+|+..++..+...+...-+.+.-....+.......- ...+.......+..+..+...+.|+.++
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Gadav 95 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDILGV 95 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCCCEE
Confidence 33456667778899999999887633333333344444444443322111 2222222233455666667777899998
Q ss_pred EEecccCCCCCCCC-CCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 137 KSFMCPSGINDFPM-TNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 137 ~~~~~~~~~~~~~~-~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
-....+- .. .+.+.+.+-++ .|+.-++|+.++-
T Consensus 96 lv~~P~y-----~~~~s~~~l~~~f~~va~a~~lPiilYn 130 (288)
T 2nuw_A 96 SSHSPYY-----FPRLPEKFLAKYYEEIARISSHSLYIYN 130 (288)
T ss_dssp EECCCCS-----SCSCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred EEcCCcC-----CCCCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 7754321 12 36666666554 4777799999875
No 124
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=47.20 E-value=1.3e+02 Score=26.70 Aligned_cols=110 Identities=14% Similarity=0.054 Sum_probs=63.1
Q ss_pred cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHH----HHHHhcCCceEEEEeccccCCCccchHHHHHHHHcC
Q 013050 57 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLK----VDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 132 (450)
Q Consensus 57 ~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 132 (450)
.++.+....+.++.+|+..++..+...+...-+.+..... .+....+.++-.+. ......+..+..+...+.|
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~a~~~G 110 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGA---GTYDTAHSIRLAKACAAEG 110 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---CCSCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC---CCCCHHHHHHHHHHHHHcC
Confidence 3455677788889999999988762223222223322222 22223333322221 1233345566667777789
Q ss_pred CcEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 133 VLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
+.++-....+- ...+.+.+.+.++ .|+.-++||.++-
T Consensus 111 adavlv~~P~y-----~~~s~~~l~~~f~~va~a~~lPiilYn 148 (304)
T 3l21_A 111 AHGLLVVTPYY-----SKPPQRGLQAHFTAVADATELPMLLYD 148 (304)
T ss_dssp CSEEEEECCCS-----SCCCHHHHHHHHHHHHTSCSSCEEEEE
T ss_pred CCEEEECCCCC-----CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99988764331 1235666666554 4666799999985
No 125
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=46.83 E-value=1.5e+02 Score=25.93 Aligned_cols=108 Identities=11% Similarity=-0.018 Sum_probs=61.6
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHh-cCCceEEEEeccccCCCccchHHHHHHHHcCCcEEE
Q 013050 59 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE-KRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLK 137 (450)
Q Consensus 59 ~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 137 (450)
+.+....+.++.+|+..++..+...+...-+.+.-....+... .... ...+.......+..+..+...+.|+.++-
T Consensus 19 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~Gvg~~~t~~ai~la~~A~~~Gadavl 95 (286)
T 2r91_A 19 ELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQVASLNADEAIALAKYAESRGAEAVA 95 (286)
T ss_dssp HHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEECCCSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEeeCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 4466667788899999998876222322333333333333222 1111 22222223344556666777789999987
Q ss_pred EecccCCCCCCCC-CCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 138 SFMCPSGINDFPM-TNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 138 ~~~~~~~~~~~~~-~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
....+- .. .+.+.+.+.++ .|+.-++|+.++-
T Consensus 96 v~~P~y-----~~~~s~~~l~~~f~~va~a~~lPiilYn 129 (286)
T 2r91_A 96 SLPPYY-----FPRLSERQIAKYFRDLCSAVSIPVFLYN 129 (286)
T ss_dssp ECCSCS-----STTCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EcCCcC-----CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 754331 12 36677666554 4667789999875
No 126
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=46.38 E-value=1.2e+02 Score=26.73 Aligned_cols=108 Identities=14% Similarity=0.078 Sum_probs=61.0
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCc
Q 013050 59 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVL 134 (450)
Q Consensus 59 ~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 134 (450)
+.+....+.++.+|+..++..+...+...-+.+.-.. ..+....+.++-.+. ......+..+..+...+.|+.
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~A~~~Gad 97 (294)
T 2ehh_A 21 EALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGT---GGNATHEAVHLTAHAKEVGAD 97 (294)
T ss_dssp HHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---CCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCCCHHHHHHHHHHHHhcCCC
Confidence 4466677788999999998875222322222322222 222222332222221 122334456666777778999
Q ss_pred EEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 135 GLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
++-....+- ...+.+.+.+.++ .|+.-++|+.++-
T Consensus 98 avlv~~P~y-----~~~s~~~l~~~f~~va~a~~lPiilYn 133 (294)
T 2ehh_A 98 GALVVVPYY-----NKPTQRGLYEHFKTVAQEVDIPIIIYN 133 (294)
T ss_dssp EEEEECCCS-----SCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred EEEECCCCC-----CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 987764331 1246667666554 4677799999875
No 127
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=46.20 E-value=1.3e+02 Score=25.32 Aligned_cols=104 Identities=13% Similarity=-0.007 Sum_probs=60.5
Q ss_pred chHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCcc-chHHHHHHHHcCCcEEEE
Q 013050 60 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAY-NASALEALLNAGVLGLKS 138 (450)
Q Consensus 60 ~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~ 138 (450)
++....+.+.+.|+..+--.. ...+.......+....+.+.... +.+...........+ ..+.++...+.|+..+..
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~-~~~~~~~~~~~~~~~~~~l~~~g-l~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~ 108 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKD-FHLPLNSTDEQIRAFHDKCAAHK-VTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVG 108 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECT-TTSCTTCCHHHHHHHHHHHHHTT-CEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHhCCCEEEEec-ccCCCCCCHHHHHHHHHHHHHcC-CeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEe
Confidence 377888899999999987664 21122334444555555444332 222211111111111 223334444578888876
Q ss_pred ecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 013050 139 FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 176 (450)
Q Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 176 (450)
+. ..+.+.++.+.|+++|+.+.+|...
T Consensus 109 ~p-----------~~~~l~~l~~~a~~~gv~l~lEn~~ 135 (257)
T 3lmz_A 109 VP-----------NYELLPYVDKKVKEYDFHYAIHLHG 135 (257)
T ss_dssp EE-----------CGGGHHHHHHHHHHHTCEEEEECCC
T ss_pred cC-----------CHHHHHHHHHHHHHcCCEEEEecCC
Confidence 32 2467889999999999999999853
No 128
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=45.38 E-value=1.6e+02 Score=25.86 Aligned_cols=110 Identities=10% Similarity=-0.026 Sum_probs=62.3
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCcEEE
Q 013050 58 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLK 137 (450)
Q Consensus 58 ~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 137 (450)
++.+....+.++.+|+..++..+...+...-+.+......+.......- ...+.......+..+..+...+.|+.++-
T Consensus 19 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~Gadavl 96 (293)
T 1w3i_A 19 KEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFDIVGIA 96 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSCCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 3456667778899999999887633333333344333444433322111 22221222334445556666678999887
Q ss_pred EecccCCCCCCCC-CCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 138 SFMCPSGINDFPM-TNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 138 ~~~~~~~~~~~~~-~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
....+- .. .+.+.+.+.++ .|+.-++||.++-
T Consensus 97 v~~P~y-----~~~~s~~~l~~~f~~va~a~~lPiilYn 130 (293)
T 1w3i_A 97 SYAPYY-----YPRMSEKHLVKYFKTLCEVSPHPVYLYN 130 (293)
T ss_dssp EECCCS-----CSSCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EcCCCC-----CCCCCHHHHHHHHHHHHhhCCCCEEEEE
Confidence 764331 12 36667666554 4677789999875
No 129
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=45.38 E-value=1.6e+02 Score=25.78 Aligned_cols=98 Identities=7% Similarity=-0.067 Sum_probs=53.2
Q ss_pred hHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCChhhhhhhhhhccCcCCcccccc
Q 013050 122 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEMEKGSERHVKLEDDTLDTRSYST 198 (450)
Q Consensus 122 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (450)
.+...++++.|+.-+............+....+++.+++...+. .++++++....+...+.+++.+. +.-..++
T Consensus 32 ~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT~~~~va~aAl~aGa---~iINdvs 108 (280)
T 1eye_A 32 VKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDTMRADVARAALQNGA---QMVNDVS 108 (280)
T ss_dssp HHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTC---CEEEETT
T ss_pred HHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeCCCHHHHHHHHHcCC---CEEEECC
Confidence 44566778888877766432211111123345566555544443 39999999999998888887632 1122222
Q ss_pred ccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEec
Q 013050 199 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHL 238 (450)
Q Consensus 199 ~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~ 238 (450)
..... ..++.++.++ +.++-+.|.
T Consensus 109 g~~~d---------~~m~~~~a~~-------~~~vVlmh~ 132 (280)
T 1eye_A 109 GGRAD---------PAMGPLLAEA-------DVPWVLMHW 132 (280)
T ss_dssp TTSSC---------TTHHHHHHHH-------TCCEEEECC
T ss_pred CCCCC---------HHHHHHHHHh-------CCeEEEEcC
Confidence 22212 2456666666 888888886
No 130
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=45.35 E-value=1.6e+02 Score=25.97 Aligned_cols=111 Identities=12% Similarity=0.045 Sum_probs=63.1
Q ss_pred CcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHH----HHHHhcCCceEEEEeccccCCCccchHHHHHHHHc
Q 013050 56 TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLK----VDAAEKRIYVDVGFWGGLVPENAYNASALEALLNA 131 (450)
Q Consensus 56 ~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (450)
...+.+....+.++.+|+..++..+...+...-+.+.-... .+....+.++-.+. ......+..+..+...+.
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~st~~ai~la~~A~~~ 110 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGV---GTNNTRTSVELAEAAASA 110 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEEC---CCSCHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecC---CCCCHHHHHHHHHHHHhc
Confidence 33455667788889999999988763333333333322222 22222332222221 122334556666777788
Q ss_pred CCcEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 132 GVLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 132 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
|+.++-....+- ...+.+.+.+-++ .|+.-++|+.++-
T Consensus 111 Gadavlv~~P~y-----~~~~~~~l~~~f~~ia~a~~lPiilYn 149 (304)
T 3cpr_A 111 GADGLLVVTPYY-----SKPSQEGLLAHFGAIAAATEVPICLYD 149 (304)
T ss_dssp TCSEEEEECCCS-----SCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCEEEECCCCC-----CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999987764332 1235666666554 4777789999875
No 131
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=45.04 E-value=1.5e+02 Score=26.07 Aligned_cols=109 Identities=13% Similarity=0.123 Sum_probs=62.6
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHH----HHHHhc-CCceEEEEeccccCCCccchHHHHHHHHcC
Q 013050 58 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLK----VDAAEK-RIYVDVGFWGGLVPENAYNASALEALLNAG 132 (450)
Q Consensus 58 ~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 132 (450)
.+.+....+.++.+|+..++..+...+...-+.+..... .+.... +.++-.+. ......+..+..+...+.|
T Consensus 27 ~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---g~~~t~~ai~la~~a~~~G 103 (301)
T 3m5v_A 27 EQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---GSNATHEAVGLAKFAKEHG 103 (301)
T ss_dssp HHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---CCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---CCCCHHHHHHHHHHHHHcC
Confidence 345667778889999999988762223222233322222 222233 32222221 1233445566677777899
Q ss_pred CcEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 133 VLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
+.++-....+- ...+.+.+.+.++ .|+.-++||.++-
T Consensus 104 adavlv~~P~y-----~~~s~~~l~~~f~~va~a~~lPiilYn 141 (301)
T 3m5v_A 104 ADGILSVAPYY-----NKPTQQGLYEHYKAIAQSVDIPVLLYN 141 (301)
T ss_dssp CSEEEEECCCS-----SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCEEEEcCCCC-----CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 99988765332 1235666666554 4677799999885
No 132
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=44.69 E-value=1.4e+02 Score=26.42 Aligned_cols=115 Identities=5% Similarity=-0.067 Sum_probs=63.7
Q ss_pred CcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcC--CceEEEEeccccCCCccchHHHHHHHHcCC
Q 013050 56 TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR--IYVDVGFWGGLVPENAYNASALEALLNAGV 133 (450)
Q Consensus 56 ~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 133 (450)
..++.+....+.++.+|+..++..+...+...-+.+......+..... ..+.+.. +.......+..+..+...+.|+
T Consensus 32 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia-Gvg~~~t~~ai~la~~A~~~Ga 110 (307)
T 3s5o_A 32 VDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA-GSGCESTQATVEMTVSMAQVGA 110 (307)
T ss_dssp BCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE-ECCCSSHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE-ecCCCCHHHHHHHHHHHHHcCC
Confidence 344556667778899999999887622232233333333333333221 1222222 1112334455666677778999
Q ss_pred cEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 134 LGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
.++-....+-. .+..+.+.+.+.++ .|+.-++|+.++-
T Consensus 111 davlv~~P~y~---~~~~s~~~l~~~f~~ia~a~~lPiilYn 149 (307)
T 3s5o_A 111 DAAMVVTPCYY---RGRMSSAALIHHYTKVADLSPIPVVLYS 149 (307)
T ss_dssp SEEEEECCCTT---GGGCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEEcCCCcC---CCCCCHHHHHHHHHHHHhhcCCCEEEEe
Confidence 99887543311 01246666666554 4667789999876
No 133
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=44.52 E-value=1.1e+02 Score=26.72 Aligned_cols=109 Identities=14% Similarity=0.150 Sum_probs=61.3
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHH----HHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCC
Q 013050 58 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLK----VDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGV 133 (450)
Q Consensus 58 ~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 133 (450)
++.+....+.++.+|+..++..+...+...-+.+.-... .+....+.++-.+. ......+..+..+...+.|+
T Consensus 20 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---g~~~t~~ai~la~~a~~~Ga 96 (289)
T 2yxg_A 20 FDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGA---GSNCTEEAIELSVFAEDVGA 96 (289)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---CCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---CCCCHHHHHHHHHHHHhcCC
Confidence 344666777889999999988752223222233322222 22222332222221 12233445566667777899
Q ss_pred cEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 134 LGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
.++-....+- ...+.+.+.+.++ .|+.-++|+.++-
T Consensus 97 davlv~~P~y-----~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (289)
T 2yxg_A 97 DAVLSITPYY-----NKPTQEGLRKHFGKVAESINLPIVLYN 133 (289)
T ss_dssp SEEEEECCCS-----SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEECCCCC-----CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9987764332 1246667666554 4677789999875
No 134
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=42.65 E-value=1.8e+02 Score=27.62 Aligned_cols=106 Identities=14% Similarity=0.109 Sum_probs=58.9
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcC-CceEEEEeccccC-CC-ccchHHHHHHHHcCCcEEEEe
Q 013050 63 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR-IYVDVGFWGGLVP-EN-AYNASALEALLNAGVLGLKSF 139 (450)
Q Consensus 63 ~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~ 139 (450)
...+.++.+|+..++-+. ... ....+....+.+... ..+.......... .+ ....+..+.+.+.|+..+...
T Consensus 104 ~~v~~a~~~Gvd~i~if~-~~s----d~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~ 178 (464)
T 2nx9_A 104 TFVERAVKNGMDVFRVFD-AMN----DVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALK 178 (464)
T ss_dssp HHHHHHHHTTCCEEEECC-TTC----CTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHhCCcCEEEEEE-ecC----HHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEc
Confidence 345677889999888764 221 123444444444322 2333333211111 12 223455667778898765542
Q ss_pred cccCCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEecCChhh
Q 013050 140 MCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG 179 (450)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~ 179 (450)
= .. -...+....++++..++ .++++.+|.++...
T Consensus 179 D-T~-----G~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~G 213 (464)
T 2nx9_A 179 D-MA-----GILTPYAAEELVSTLKKQVDVELHLHCHSTAG 213 (464)
T ss_dssp E-TT-----SCCCHHHHHHHHHHHHHHCCSCEEEEECCTTS
T ss_pred C-CC-----CCcCHHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence 1 11 14677888887777544 58999999977655
No 135
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=42.64 E-value=2e+02 Score=26.20 Aligned_cols=51 Identities=4% Similarity=-0.098 Sum_probs=33.5
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
+.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+++|..++..
T Consensus 84 ~lv~~li~~Gv~Gl~v~GTT---GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~ 137 (360)
T 4dpp_A 84 DLVNIQIQNGAEGVIVGGTT---GEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGS 137 (360)
T ss_dssp HHHHHHHHTTCCEEEESSTT---TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCC
T ss_pred HHHHHHHHcCCCEEEecccc---cChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCC
Confidence 34555667899998764322 34467788887777766544 35788888843
No 136
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=42.51 E-value=1.4e+02 Score=26.50 Aligned_cols=109 Identities=15% Similarity=0.090 Sum_probs=62.6
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCC
Q 013050 58 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGV 133 (450)
Q Consensus 58 ~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 133 (450)
.+.+....+.++.+|+..++..+...+...-+.+.... ..+....+.++-.+. ......+..+..+...+.|+
T Consensus 42 ~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---g~~st~~ai~la~~A~~~Ga 118 (315)
T 3si9_A 42 EKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGA---GSNSTSEAVELAKHAEKAGA 118 (315)
T ss_dssp HHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---CCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC---CCCCHHHHHHHHHHHHhcCC
Confidence 34566677788999999998775222222222332222 223333443333322 12334455666677778999
Q ss_pred cEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 134 LGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
.++-....+- ...+.+.+.+-++ .|+.-++||.++-
T Consensus 119 davlv~~P~y-----~~~~~~~l~~~f~~va~a~~lPiilYn 155 (315)
T 3si9_A 119 DAVLVVTPYY-----NRPNQRGLYTHFSSIAKAISIPIIIYN 155 (315)
T ss_dssp SEEEEECCCS-----SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEECCCCC-----CCCCHHHHHHHHHHHHHcCCCCEEEEe
Confidence 9987764332 1235666666554 4666799999985
No 137
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=42.19 E-value=1.3e+02 Score=26.39 Aligned_cols=110 Identities=14% Similarity=0.132 Sum_probs=62.2
Q ss_pred cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcC
Q 013050 57 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 132 (450)
Q Consensus 57 ~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 132 (450)
.++.+....+.++.+|+..++..+...+...-+.+.... ..+....+.++-.+. ......+..+..+...+.|
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---g~~~t~~ai~la~~a~~~G 96 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGT---GANSTREAIELTKAAKDLG 96 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeC---CCCCHHHHHHHHHHHHhcC
Confidence 334566677788899999998775222222222332222 223333333332221 1233445566667777889
Q ss_pred CcEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 133 VLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
+.++-....+- ...+.+.+.+.++ .|+.-++||.++-
T Consensus 97 adavlv~~P~y-----~~~~~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3tak_A 97 ADAALLVTPYY-----NKPTQEGLYQHYKAIAEAVELPLILYN 134 (291)
T ss_dssp CSEEEEECCCS-----SCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCEEEEcCCCC-----CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99987754331 1235566666554 4667799999885
No 138
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=41.84 E-value=1.6e+02 Score=24.89 Aligned_cols=104 Identities=12% Similarity=-0.005 Sum_probs=60.5
Q ss_pred chHHHHHHHHhCCceEEEeCCCCCC---------CCCCcHHHHHHHHHHHhcCCceEEEEeccccCCC-ccchHHHHHHH
Q 013050 60 GFPSGTKAAAAGGITTLIDMPLNSD---------PSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN-AYNASALEALL 129 (450)
Q Consensus 60 ~~~~~~~~~~~~GvT~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 129 (450)
.+....+.+...|+..+--...... +...+........+.+.... +.+.......... ....+.++...
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~i~~~~~~~~~~~~~~~~~i~~A~ 101 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKG-IKIVGTGVYVAEKSSDWEKMFKFAK 101 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTT-CEEEEEEEECCSSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcC-CeEEEEeccCCccHHHHHHHHHHHH
Confidence 3677888889999999876531100 12233444555555444332 2222221112222 22234444555
Q ss_pred HcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecC
Q 013050 130 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE 175 (450)
Q Consensus 130 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~ 175 (450)
..|+..+..+. ..+.+.++.+.|+++|+.+.+|..
T Consensus 102 ~lGa~~v~~~~-----------~~~~~~~l~~~a~~~gv~l~~En~ 136 (262)
T 3p6l_A 102 AMDLEFITCEP-----------ALSDWDLVEKLSKQYNIKISVHNH 136 (262)
T ss_dssp HTTCSEEEECC-----------CGGGHHHHHHHHHHHTCEEEEECC
T ss_pred HcCCCEEEecC-----------CHHHHHHHHHHHHHhCCEEEEEeC
Confidence 57998887742 235678899999999999999984
No 139
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=41.30 E-value=94 Score=27.69 Aligned_cols=109 Identities=9% Similarity=0.055 Sum_probs=62.6
Q ss_pred ccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCC
Q 013050 58 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGV 133 (450)
Q Consensus 58 ~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 133 (450)
++.+....+.++.+|+..++..+...+...-+.+.... ..+....+.++-.+. ......+..+..+...+.|+
T Consensus 44 ~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---g~~~t~~ai~la~~A~~~Ga 120 (315)
T 3na8_A 44 LPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSV---SDLTTAKTVRRAQFAESLGA 120 (315)
T ss_dssp HHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---CCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCCCHHHHHHHHHHHHhcCC
Confidence 34566677788999999998775222222222322222 223333443333322 12333455666777778999
Q ss_pred cEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 134 LGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
.++-....+- ...+.+.+.+.++ .|+.-++||.++-
T Consensus 121 davlv~~P~y-----~~~s~~~l~~~f~~va~a~~lPiilYn 157 (315)
T 3na8_A 121 EAVMVLPISY-----WKLNEAEVFQHYRAVGEAIGVPVMLYN 157 (315)
T ss_dssp SEEEECCCCS-----SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEECCCCC-----CCCCHHHHHHHHHHHHHhCCCcEEEEe
Confidence 9988754332 1245666666554 4667789999876
No 140
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=41.06 E-value=1.2e+02 Score=27.07 Aligned_cols=109 Identities=12% Similarity=0.147 Sum_probs=61.6
Q ss_pred cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcC
Q 013050 57 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 132 (450)
Q Consensus 57 ~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 132 (450)
.++.+....+.++.+|+..++..+...+...-+.+.-.. ..+....+.++-.+. .....+..+..+...+.|
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv----g~st~~ai~la~~A~~~G 106 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGI----GYSVDTAIELGKSAIDSG 106 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE----CSSHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecC----CcCHHHHHHHHHHHHHcC
Confidence 344566777788999999998775222222222322222 222333333322222 223344566667777789
Q ss_pred CcEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 133 VLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
+.++-....+- ...+.+.+.+-++ .|+.-++||.++-
T Consensus 107 adavlv~~P~y-----~~~s~~~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 107 ADCVMIHQPVH-----PYITDAGAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp CSEEEECCCCC-----SCCCHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred CCEEEECCCCC-----CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 99987754331 1235666666554 4777789999976
No 141
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=40.51 E-value=1.1e+02 Score=27.03 Aligned_cols=51 Identities=8% Similarity=0.087 Sum_probs=34.6
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhc----CCcEEEecCC
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY----KRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~----g~~v~~H~~~ 176 (450)
+.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+. +.+|..++..
T Consensus 32 ~lv~~li~~Gv~gl~v~Gtt---GE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~ 86 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVPVGTT---GESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGS 86 (301)
T ss_dssp HHHHHHHHTTCCEEECSSTT---TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccc---cChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCC
Confidence 34556677899888663222 344678888888877776553 5899999854
No 142
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=39.83 E-value=1.4e+02 Score=26.78 Aligned_cols=110 Identities=11% Similarity=-0.007 Sum_probs=62.2
Q ss_pred cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcC
Q 013050 57 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 132 (450)
Q Consensus 57 ~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 132 (450)
.++.+....+.++.+|+..++..+...+...-+.+.... ..+....+.++-.+.. .....+..+..+...+.|
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg---~~st~eai~la~~A~~~G 129 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIG---ALRTDEAVALAKDAEAAG 129 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC---CSSHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---CCCHHHHHHHHHHHHhcC
Confidence 344566677788899999998875222322223322222 2223333333322221 223344556666777789
Q ss_pred CcEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 133 VLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
+.++-....+- ...+.+.+.+-++ .|+.-++||.++-
T Consensus 130 adavlv~~P~Y-----~~~s~~~l~~~f~~VA~a~~lPiilYn 167 (332)
T 2r8w_A 130 ADALLLAPVSY-----TPLTQEEAYHHFAAVAGATALPLAIYN 167 (332)
T ss_dssp CSEEEECCCCS-----SCCCHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred CCEEEECCCCC-----CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99987754331 1245666666554 4777789999875
No 143
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=38.09 E-value=1.4e+02 Score=26.49 Aligned_cols=110 Identities=13% Similarity=0.117 Sum_probs=62.8
Q ss_pred cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcC
Q 013050 57 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 132 (450)
Q Consensus 57 ~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 132 (450)
.++.+....+.++..|+..++..+...+...-+.+.... ..+....+.++-.+. ......+..+..+...+.|
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---g~~st~eai~la~~A~~~G 118 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT---GANSTREAVALTEAAKSGG 118 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---CCcCHHHHHHHHHHHHHcC
Confidence 334566677788899999998875222222222322222 233333333332221 1233445566677777899
Q ss_pred CcEEEEecccCCCCCCCCCCHHHHHHHH-HHHHhcCCcEEEec
Q 013050 133 VLGLKSFMCPSGINDFPMTNASHIKEGL-SVLARYKRPLLVHA 174 (450)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 174 (450)
+.++-....+- ...+.+.+.+.+ +.|+.-++||.++-
T Consensus 119 adavlv~~P~y-----~~~s~~~l~~~f~~va~a~~lPiilYn 156 (314)
T 3qze_A 119 ADACLLVTPYY-----NKPTQEGMYQHFRHIAEAVAIPQILYN 156 (314)
T ss_dssp CSEEEEECCCS-----SCCCHHHHHHHHHHHHHHSCSCEEEEE
T ss_pred CCEEEEcCCCC-----CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99988764332 123556666655 44677799999985
No 144
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=37.37 E-value=1.8e+02 Score=25.59 Aligned_cols=51 Identities=6% Similarity=0.143 Sum_probs=34.6
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
+.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 32 ~lv~~li~~Gv~gl~~~Gtt---GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~ 85 (297)
T 3flu_A 32 DLIDWHIENGTDGIVAVGTT---GESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGA 85 (297)
T ss_dssp HHHHHHHHTTCCEEEESSTT---TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HHHHHHHHcCCCEEEeCccc---cCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCC
Confidence 34556677899988764322 34467888887777777654 35799999854
No 145
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=37.33 E-value=2.1e+02 Score=24.97 Aligned_cols=98 Identities=12% Similarity=0.110 Sum_probs=57.8
Q ss_pred hHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh----cCCcEEEecCChhhhhhhhhhccCcCCccccc
Q 013050 122 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR----YKRPLLVHAEMEKGSERHVKLEDDTLDTRSYS 197 (450)
Q Consensus 122 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~----~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~ 197 (450)
.+...++++.|+.-+........+...+....+++.++....+. .+.+++++...+...+.+++.+. +.-..+
T Consensus 41 ~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~~~va~aAl~aGa---~iINdv 117 (282)
T 1aj0_A 41 VKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGA---HIINDI 117 (282)
T ss_dssp HHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHTTC---CEEEET
T ss_pred HHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCCHHHHHHHHHcCC---CEEEEC
Confidence 34456777888887776542222122233445666655444433 39999999999998888887632 111111
Q ss_pred cccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecC
Q 013050 198 TYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS 239 (450)
Q Consensus 198 ~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~ 239 (450)
+.. . ...++.++.++ +.++-+.|..
T Consensus 118 sg~-~---------d~~~~~~~a~~-------~~~vVlmh~~ 142 (282)
T 1aj0_A 118 RSL-S---------EPGALEAAAET-------GLPVCLMHMQ 142 (282)
T ss_dssp TTT-C---------STTHHHHHHHH-------TCCEEEECCS
T ss_pred CCC-C---------CHHHHHHHHHh-------CCeEEEEccC
Confidence 211 1 13456666666 8888888863
No 146
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=36.47 E-value=1.7e+02 Score=25.65 Aligned_cols=110 Identities=14% Similarity=-0.026 Sum_probs=61.1
Q ss_pred cccchHHHHHHHHh-CCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHc
Q 013050 57 EWEGFPSGTKAAAA-GGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNA 131 (450)
Q Consensus 57 ~~~~~~~~~~~~~~-~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (450)
.++.+....+.++. +|+..++..+...+...-+.+.-.. ..+....+.++-.+. ......+..+..+...+.
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~a~~~ 98 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQV---GSVNLKEAVELGKYATEL 98 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---CCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEec---CCCCHHHHHHHHHHHHhc
Confidence 33456667778889 9999998775222222222322222 222223332222221 122334455666677778
Q ss_pred CCcEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 132 GVLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 132 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
|+.++-....+- ...+.+.+.+.++ .|+.-++|+.++-
T Consensus 99 Gadavlv~~P~y-----~~~~~~~l~~~f~~va~a~~lPiilYn 137 (293)
T 1f6k_A 99 GYDCLSAVTPFY-----YKFSFPEIKHYYDTIIAETGSNMIVYS 137 (293)
T ss_dssp TCSEEEEECCCS-----SCCCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCEEEECCCCC-----CCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 999987764331 1235666666554 4666789999875
No 147
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=36.16 E-value=1.5e+02 Score=26.74 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=62.7
Q ss_pred CcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHc
Q 013050 56 TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNA 131 (450)
Q Consensus 56 ~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (450)
..++.+....+.++.+|+..++..+...+...-+.+.-.. ..+....+.++-.+. ......+..+..+...+.
T Consensus 49 ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---g~~st~eai~la~~A~~~ 125 (343)
T 2v9d_A 49 LDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGT---GGTNARETIELSQHAQQA 125 (343)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CSSCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCCCHHHHHHHHHHHHhc
Confidence 3444566777788999999998775222322223322222 222333333322221 122334455666677778
Q ss_pred CCcEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 132 GVLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 132 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
|+.++-....+- ...+.+.+.+-++ .|+.-++||.++-
T Consensus 126 Gadavlv~~P~Y-----~~~s~~~l~~~f~~VA~a~~lPiilYn 164 (343)
T 2v9d_A 126 GADGIVVINPYY-----WKVSEANLIRYFEQVADSVTLPVMLYN 164 (343)
T ss_dssp TCSEEEEECCSS-----SCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CCCEEEECCCCC-----CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999987764332 1236677666554 4677789999875
No 148
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=35.15 E-value=1.1e+02 Score=27.02 Aligned_cols=108 Identities=12% Similarity=0.126 Sum_probs=60.6
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCc
Q 013050 59 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVL 134 (450)
Q Consensus 59 ~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 134 (450)
+.+....+.++.+|+..++..+...+...-+.+.-.. ..+....+.++-.+. ......+..+..+...+.|+.
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---g~~st~~ai~la~~A~~~Gad 109 (306)
T 1o5k_A 33 ESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGA---GTNSTEKTLKLVKQAEKLGAN 109 (306)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC---CCccHHHHHHHHHHHHhcCCC
Confidence 3456667788899999998775222222222322222 222333333322222 122334455666677778999
Q ss_pred EEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 135 GLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
++-....+- ...+.+.+.+-++ .|+.-++||.++-
T Consensus 110 avlv~~P~y-----~~~s~~~l~~~f~~va~a~~lPiilYn 145 (306)
T 1o5k_A 110 GVLVVTPYY-----NKPTQEGLYQHYKYISERTDLGIVVYN 145 (306)
T ss_dssp EEEEECCCS-----SCCCHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred EEEECCCCC-----CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 987764331 1246677776554 4666789999875
No 149
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=34.77 E-value=24 Score=30.53 Aligned_cols=36 Identities=19% Similarity=0.154 Sum_probs=26.2
Q ss_pred ceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeC
Q 013050 43 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDM 79 (450)
Q Consensus 43 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~ 79 (450)
++|.|+|..... ....++....+.+.+.|++.+.-.
T Consensus 1 ~~DlH~Ht~~S~-DG~~~~ee~v~~A~~~Gl~~iaiT 36 (267)
T 2yxo_A 1 MVDSHVHTPLCG-HAEGHPEAYLEEARAKGLKGVVFT 36 (267)
T ss_dssp CEEEEECCGGGS-SCCSCHHHHHHHHHHTTCSEEEEE
T ss_pred CCccCcCcCCCC-CCCCCHHHHHHHHHHcCCCEEEEc
Confidence 589999985441 233457788889999999977654
No 150
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=34.41 E-value=1.4e+02 Score=26.12 Aligned_cols=108 Identities=15% Similarity=0.118 Sum_probs=60.8
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHH----HHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCc
Q 013050 59 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVL 134 (450)
Q Consensus 59 ~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 134 (450)
+.+....+.++.+|+..++..+...+...-+.+.. +...+....+.++-.+. ......+..+..+...+.|+.
T Consensus 23 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~a~~~Gad 99 (292)
T 3daq_A 23 EALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGT---GTNDTEKSIQASIQAKALGAD 99 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeC---CcccHHHHHHHHHHHHHcCCC
Confidence 34666677888999999988752222222222222 22223333333332221 123334556666777778999
Q ss_pred EEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 135 GLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
++-....+- ...+.+.+.+.++ .|+.-++|+.++-
T Consensus 100 avlv~~P~y-----~~~~~~~l~~~f~~ia~a~~lPiilYn 135 (292)
T 3daq_A 100 AIMLITPYY-----NKTNQRGLVKHFEAIADAVKLPVVLYN 135 (292)
T ss_dssp EEEEECCCS-----SCCCHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred EEEECCCCC-----CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 987764331 1235666666554 4666799999875
No 151
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=33.75 E-value=1.5e+02 Score=26.15 Aligned_cols=50 Identities=18% Similarity=0.153 Sum_probs=34.2
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 124 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 124 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 41 lv~~li~~Gv~gi~v~Gtt---GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~ 93 (304)
T 3l21_A 41 LANHLVDQGCDGLVVSGTT---GESPTTTDGEKIELLRAVLEAVGDRARVIAGAGT 93 (304)
T ss_dssp HHHHHHHTTCSEEEESSTT---TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCC
T ss_pred HHHHHHHcCCCEEEeCccc---cchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence 4556677899888664322 34467888888887777655 35789998843
No 152
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=33.55 E-value=1.5e+02 Score=26.18 Aligned_cols=51 Identities=14% Similarity=0.124 Sum_probs=34.6
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
+.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 33 ~lv~~li~~Gv~gl~v~GtT---GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~ 86 (309)
T 3fkr_A 33 RAVDFMIDAGSDGLCILANF---SEQFAITDDERDVLTRTILEHVAGRVPVIVTTSH 86 (309)
T ss_dssp HHHHHHHHTTCSCEEESSGG---GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccc---cCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCC
Confidence 34556677899888764322 33457888888887777654 35789999854
No 153
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=33.48 E-value=1.2e+02 Score=26.60 Aligned_cols=110 Identities=13% Similarity=0.126 Sum_probs=60.4
Q ss_pred cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcC
Q 013050 57 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 132 (450)
Q Consensus 57 ~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 132 (450)
.++.+....+.++.+|+..++..+...+...-+.+.... ..+....+.++-.+. ......+..+..+...+.|
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---g~~~t~~ai~la~~a~~~G 96 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGT---GANATAEAISLTQRFNDSG 96 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHTTTSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCccHHHHHHHHHHHHhcC
Confidence 334566677788899999998875222322223322222 222333333322221 1122334445555556689
Q ss_pred CcEEEEecccCCCCCCCCCCHHHHHHHHHH-HHhcCCcEEEec
Q 013050 133 VLGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 174 (450)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-a~~~g~~v~~H~ 174 (450)
+.++-....+- ...+.+.+.+.++. |+.-++|+.++-
T Consensus 97 adavlv~~P~y-----~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (292)
T 2ojp_A 97 IVGCLTVTPYY-----NRPSQEGLYQHFKAIAEHTDLPQILYN 134 (292)
T ss_dssp CSEEEEECCCS-----SCCCHHHHHHHHHHHHTTCSSCEEEEC
T ss_pred CCEEEECCCCC-----CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99887754331 12466777766554 666789999875
No 154
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=32.88 E-value=2.6e+02 Score=24.72 Aligned_cols=111 Identities=7% Similarity=0.061 Sum_probs=61.8
Q ss_pred CcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHH----hcCCceEEEEeccccCCCccchHHHHHHHHc
Q 013050 56 TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAA----EKRIYVDVGFWGGLVPENAYNASALEALLNA 131 (450)
Q Consensus 56 ~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (450)
..++.+....+.++.+|+..++..+...+...-+.+......+.. ..+.++-.+. ......+..+..+...+.
T Consensus 25 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv---g~~~t~~ai~la~~A~~~ 101 (311)
T 3h5d_A 25 INFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGV---GTNDTRDSIEFVKEVAEF 101 (311)
T ss_dssp BCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC---CCSSHHHHHHHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---CCcCHHHHHHHHHHHHhc
Confidence 344567778888899999999887622332233333333332222 2232322221 122333445556666677
Q ss_pred CC-cEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 132 GV-LGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 132 g~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
|+ .++-....+- ...+.+.+.+.++ .|+.-++|+.++-
T Consensus 102 Ga~davlv~~P~y-----~~~s~~~l~~~f~~va~a~~lPiilYn 141 (311)
T 3h5d_A 102 GGFAAGLAIVPYY-----NKPSQEGMYQHFKAIADASDLPIIIYN 141 (311)
T ss_dssp CCCSEEEEECCCS-----SCCCHHHHHHHHHHHHHSCSSCEEEEE
T ss_pred CCCcEEEEcCCCC-----CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 86 8887654321 1235666666554 4666799999975
No 155
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=32.22 E-value=2.7e+02 Score=24.65 Aligned_cols=111 Identities=12% Similarity=0.071 Sum_probs=62.0
Q ss_pred cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHH-hcCCceEEEEeccccCCCccchHHHHHHHHcCCcE
Q 013050 57 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAA-EKRIYVDVGFWGGLVPENAYNASALEALLNAGVLG 135 (450)
Q Consensus 57 ~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 135 (450)
..+.+....+.++.+|+..++..+...+...-+.+......+.. +....+.+.. +.......+..+..+...+.|+.+
T Consensus 27 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia-Gvg~~~t~~ai~la~~A~~~Gada 105 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIV-GVSAPGFAAMRRLARLSMDAGAAG 105 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE-ECCCSSHHHHHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE-ecCCCCHHHHHHHHHHHHHcCCCE
Confidence 34456677788899999999887522222222333222222222 1112222222 112233445566667777889999
Q ss_pred EEEecccCCCCCCCCCCHHHHHHHHH-HHHhcC--CcEEEec
Q 013050 136 LKSFMCPSGINDFPMTNASHIKEGLS-VLARYK--RPLLVHA 174 (450)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g--~~v~~H~ 174 (450)
+-....+ . ..+.+.+.+-++ .|+.-+ +||.++-
T Consensus 106 vlv~~P~-~-----~~s~~~l~~~f~~va~a~~~~lPiilYn 141 (313)
T 3dz1_A 106 VMIAPPP-S-----LRTDEQITTYFRQATEAIGDDVPWVLQD 141 (313)
T ss_dssp EEECCCT-T-----CCSHHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred EEECCCC-C-----CCCHHHHHHHHHHHHHhCCCCCcEEEEe
Confidence 9775433 1 235666666554 466666 9999875
No 156
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=32.01 E-value=1.2e+02 Score=26.50 Aligned_cols=108 Identities=16% Similarity=0.086 Sum_probs=60.9
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCc
Q 013050 59 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVL 134 (450)
Q Consensus 59 ~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 134 (450)
+.+....+.++.+|+..++..+...+...-+.+.-.. ..+....+.++-.+.. .....+..+..+...+.|+.
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---~~~t~~ai~la~~A~~~Gad 97 (292)
T 2vc6_A 21 VALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG---SNSTAEAIAFVRHAQNAGAD 97 (292)
T ss_dssp HHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC---CSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---CccHHHHHHHHHHHHHcCCC
Confidence 4466677788899999998775222222222322222 2223333333333221 12334455666677778999
Q ss_pred EEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 135 GLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
++-....+- ...+.+.+.+.++ .|+.-++||.++-
T Consensus 98 avlv~~P~y-----~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (292)
T 2vc6_A 98 GVLIVSPYY-----NKPTQEGIYQHFKAIDAASTIPIIVYN 133 (292)
T ss_dssp EEEEECCCS-----SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEEEcCCCC-----CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 987754331 1236666666554 4677789999875
No 157
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=31.80 E-value=2.8e+02 Score=24.75 Aligned_cols=32 Identities=13% Similarity=-0.022 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHhhchhHHhC
Q 013050 340 VLPVTWSYGRKYGVTLEQLASWWSERPAKLAG 371 (450)
Q Consensus 340 ~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg 371 (450)
.++.+...+.+.|+|.+++-+++-.|..+++.
T Consensus 289 ~~~~l~~~L~~~G~se~~i~ki~g~N~lRvl~ 320 (325)
T 2i5g_A 289 EFPNLTETLLKRGMPERVVRKVMGENWVRVLR 320 (325)
T ss_dssp GTHHHHHHHHHTTCCHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 35666677788899999999999999988775
No 158
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=31.65 E-value=1.6e+02 Score=25.99 Aligned_cols=50 Identities=22% Similarity=0.179 Sum_probs=34.1
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhc---CCcEEEecCC
Q 013050 124 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEM 176 (450)
Q Consensus 124 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~ 176 (450)
.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+. +.+|..++..
T Consensus 40 lv~~li~~Gv~Gl~v~GtT---GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~ 92 (307)
T 3s5o_A 40 NLHKLGTFPFRGFVVQGSN---GEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGC 92 (307)
T ss_dssp HHHHHTTSCCSEEEESSGG---GTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccc---cchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCC
Confidence 3445566899888764322 334578888888888887664 5788888843
No 159
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=31.40 E-value=1.1e+02 Score=26.87 Aligned_cols=108 Identities=13% Similarity=0.083 Sum_probs=60.9
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCc
Q 013050 59 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVL 134 (450)
Q Consensus 59 ~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 134 (450)
+.+....+.++.+|+..++..+...+...-+.+.... ..+....+.++-.+. ......+..+..+...+.|+.
T Consensus 21 ~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~A~~~Gad 97 (297)
T 2rfg_A 21 KALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGA---GSNNPVEAVRYAQHAQQAGAD 97 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---CCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcc---CCCCHHHHHHHHHHHHhcCCC
Confidence 4466677788899999998775222222222322222 222333333333222 122334455666677778999
Q ss_pred EEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 135 GLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
++-....+- ...+.+.+.+-++ .|+.-++||.++-
T Consensus 98 avlv~~P~y-----~~~s~~~l~~~f~~va~a~~lPiilYn 133 (297)
T 2rfg_A 98 AVLCVAGYY-----NRPSQEGLYQHFKMVHDAIDIPIIVYN 133 (297)
T ss_dssp EEEECCCTT-----TCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEEEcCCCC-----CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 987754331 1246667666554 4677789999875
No 160
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=31.13 E-value=33 Score=29.12 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=25.9
Q ss_pred ceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeC
Q 013050 43 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDM 79 (450)
Q Consensus 43 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~ 79 (450)
++|.|+|..... ....++....+.+.+.|++.+.-.
T Consensus 3 ~~DlH~Ht~~Sd-~g~~~~~e~v~~A~~~Gl~~iaiT 38 (245)
T 1m65_A 3 PVDLHMHTVAST-HAYSTLSDYIAQAKQKGIKLFAIT 38 (245)
T ss_dssp CEECCBCCTTST-TCCCCHHHHHHHHHHHTCCEEEEE
T ss_pred ceEeCcCCCCCC-CCCCcHHHHHHHHHHCCCCEEEEC
Confidence 689999986542 222356778888899999877554
No 161
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=31.02 E-value=1.9e+02 Score=25.68 Aligned_cols=50 Identities=6% Similarity=0.072 Sum_probs=33.2
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 124 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 124 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 49 lv~~li~~Gv~Gl~v~GtT---GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~ 101 (314)
T 3qze_A 49 LVDFHLQEGTNAIVAVGTT---GESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGA 101 (314)
T ss_dssp HHHHHHHHTCCEEEESSGG---GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HHHHHHHcCCCEEEECccc---cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC
Confidence 3555667899888764322 33457788887777776544 35789998854
No 162
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=30.63 E-value=2.4e+02 Score=24.75 Aligned_cols=50 Identities=8% Similarity=0.084 Sum_probs=33.5
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 124 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 124 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 38 lv~~li~~Gv~gl~v~GtT---GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~ 90 (301)
T 1xky_A 38 LVNYLIDNGTTAIVVGGTT---GESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS 90 (301)
T ss_dssp HHHHHHHTTCCEEEESSTT---TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HHHHHHHcCCCEEEECccc---cChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCC
Confidence 3555677899888764222 34467888887777777654 35789998854
No 163
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=30.54 E-value=1.8e+02 Score=25.90 Aligned_cols=50 Identities=14% Similarity=0.192 Sum_probs=33.8
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 124 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 124 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 48 li~~li~~Gv~Gl~v~GtT---GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~ 100 (315)
T 3si9_A 48 FVEWQITQGINGVSPVGTT---GESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGS 100 (315)
T ss_dssp HHHHHHHTTCSEEECSSTT---TTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC
T ss_pred HHHHHHHcCCCEEEeCccc---cCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC
Confidence 3556677899888653222 34467888888877777654 35789998854
No 164
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=30.37 E-value=2.6e+02 Score=25.35 Aligned_cols=107 Identities=11% Similarity=0.005 Sum_probs=58.7
Q ss_pred cchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCc
Q 013050 59 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVL 134 (450)
Q Consensus 59 ~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 134 (450)
+.+....+.++.+|+..++..+...+...-+.+.-.. ..+....+.++-.+. ......+..+..+...+.|+.
T Consensus 80 ~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---g~~st~eai~la~~A~~~Gad 156 (360)
T 4dpp_A 80 EAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNT---GSNSTREAIHATEQGFAVGMH 156 (360)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---CCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEec---CCCCHHHHHHHHHHHHHcCCC
Confidence 3466667788899999998875222222222322222 222223332222211 122334455666677778999
Q ss_pred EEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEec
Q 013050 135 GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 174 (450)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 174 (450)
++-....+- ...+.+.+.+-++...+. .|+.++-
T Consensus 157 avlvv~PyY-----~k~sq~gl~~hf~~IA~a-~PiilYN 190 (360)
T 4dpp_A 157 AALHINPYY-----GKTSIEGLIAHFQSVLHM-GPTIIYN 190 (360)
T ss_dssp EEEEECCCS-----SCCCHHHHHHHHHTTGGG-SCEEEEE
T ss_pred EEEEcCCCC-----CCCCHHHHHHHHHHHHHh-CCEEEEe
Confidence 887764332 124677777766654443 6887764
No 165
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=30.36 E-value=2e+02 Score=25.12 Aligned_cols=51 Identities=8% Similarity=0.120 Sum_probs=34.3
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
+.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 26 ~lv~~li~~Gv~gl~~~Gtt---GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~ 79 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVGTT---GEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGA 79 (291)
T ss_dssp HHHHHHHHHTCCEEEESSTT---TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HHHHHHHHCCCCEEEECccc---cccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence 34556677899988653222 34467788888887777654 35789999854
No 166
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=30.35 E-value=2.2e+02 Score=24.83 Aligned_cols=50 Identities=8% Similarity=0.078 Sum_probs=33.1
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 124 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 124 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 27 lv~~li~~Gv~gl~~~Gtt---GE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~ 79 (291)
T 3a5f_A 27 LIEWHIKSKTDAIIVCGTT---GEATTMTETERKETIKFVIDKVNKRIPVIAGTGS 79 (291)
T ss_dssp HHHHHHHTTCCEEEESSGG---GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HHHHHHHcCCCEEEECccc---cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCc
Confidence 3455667899888764322 33456788887777776554 35789998854
No 167
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=29.97 E-value=2e+02 Score=25.40 Aligned_cols=113 Identities=13% Similarity=0.024 Sum_probs=63.1
Q ss_pred cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcC
Q 013050 57 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 132 (450)
Q Consensus 57 ~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 132 (450)
..+.+....+.++.+|+..++..+...+...-+.+.-.. ..+....+.++-.+. ......+..+..+...+.|
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~A~~~G 103 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTT---SHYSTQVCAARSLRAQQLG 103 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec---CCchHHHHHHHHHHHHHcC
Confidence 344566777888999999988875222222222322222 223333333332222 1223344566667777899
Q ss_pred CcEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 133 VLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
+.++-....|-. .....+.+.+.+.++ .|+.-++|+.++-
T Consensus 104 adavlv~~Pyy~--~~~~~s~~~l~~~f~~va~a~~lPiilYn 144 (309)
T 3fkr_A 104 AAMVMAMPPYHG--ATFRVPEAQIFEFYARVSDAIAIPIMVQD 144 (309)
T ss_dssp CSEEEECCSCBT--TTBCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCEEEEcCCCCc--cCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999887543310 001235666666554 4677799999875
No 168
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=29.87 E-value=3.5e+02 Score=26.13 Aligned_cols=106 Identities=10% Similarity=0.082 Sum_probs=57.7
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHHHHHHHhcC-CceEEEEecccc-CCC-ccchHHHHHHHHcCCcEEEEe
Q 013050 63 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR-IYVDVGFWGGLV-PEN-AYNASALEALLNAGVLGLKSF 139 (450)
Q Consensus 63 ~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~g~~~~~~~ 139 (450)
...+.+..+|+..++-+. .... ...+....+.+... ..+...+..... ..+ ....+..+.+.+.|+..+...
T Consensus 121 ~~ve~a~~aGvd~vrIf~-s~sd----~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~ 195 (539)
T 1rqb_A 121 RFVDKSAENGMDVFRVFD-AMND----PRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALK 195 (539)
T ss_dssp HHHHHHHHTTCCEEEECC-TTCC----THHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHhCCCCEEEEEE-ehhH----HHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeC
Confidence 345677889999888764 2211 13344444444332 223322221111 111 123455666777888765442
Q ss_pred cccCCCCCCCCCCHHHHHHHHHHHHh-c--CCcEEEecCChhh
Q 013050 140 MCPSGINDFPMTNASHIKEGLSVLAR-Y--KRPLLVHAEMEKG 179 (450)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~~~~a~~-~--g~~v~~H~~~~~~ 179 (450)
= .. -...+..+.++++..++ . ++++.+|.++...
T Consensus 196 D-T~-----G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~G 232 (539)
T 1rqb_A 196 D-MA-----ALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTG 232 (539)
T ss_dssp E-TT-----CCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTS
T ss_pred C-CC-----CCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCC
Confidence 1 11 14677788887777654 4 6899999977665
No 169
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=29.78 E-value=1.9e+02 Score=25.36 Aligned_cols=51 Identities=10% Similarity=0.094 Sum_probs=34.1
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
+.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 27 ~lv~~li~~Gv~gl~v~Gtt---GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~ 80 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTT---AESPTLTTDEKELILKTVIDLVDKRVPVIAGTGT 80 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGG---GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccc---cccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCc
Confidence 34556677899998764322 33456788887777776554 35789999843
No 170
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=29.76 E-value=2.3e+02 Score=24.78 Aligned_cols=51 Identities=10% Similarity=0.013 Sum_probs=34.8
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhc---CCcEEEecCC
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~ 176 (450)
+.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+. +.+|..++..
T Consensus 28 ~lv~~li~~Gv~gl~~~Gtt---GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~ 81 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLFGTT---GEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLV 81 (294)
T ss_dssp HHHHHHHHTTCSEEEESSTT---TTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccc---cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC
Confidence 34556677899888764322 344678888888888877653 4688888844
No 171
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=29.63 E-value=2.9e+02 Score=24.28 Aligned_cols=50 Identities=18% Similarity=0.142 Sum_probs=33.7
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 124 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 124 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ ...+|..++..
T Consensus 42 lv~~li~~Gv~gl~v~Gtt---GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~ 94 (304)
T 3cpr_A 42 VAAYLVDKGLDSLVLAGTT---GESPTTTAAEKLELLKAVREEVGDRAKLIAGVGT 94 (304)
T ss_dssp HHHHHHHTTCCEEEESSTT---TTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccc---cChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCC
Confidence 4556677899888764322 34467888887777777654 35789998854
No 172
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=29.33 E-value=1.3e+02 Score=26.40 Aligned_cols=111 Identities=14% Similarity=0.107 Sum_probs=62.3
Q ss_pred CcccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHHHH----HHHHHhcCCceEEEEeccccCCCccchHHHHHHHHc
Q 013050 56 TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL----KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNA 131 (450)
Q Consensus 56 ~~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (450)
..++.+....+.++.+|+..++..+...+...-+.+.... ..+....+.++-.+. ......+..+..+...+.
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gv---g~~~t~~ai~la~~a~~~ 95 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGT---GSNNTAASIAMSKWAESI 95 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---CcccHHHHHHHHHHHHhc
Confidence 3345566777788999999998775222222222222222 222333333322221 122334556666777788
Q ss_pred CCcEEEEecccCCCCCCCCCCHHHHHHHHHH-HHhcCCcEEEec
Q 013050 132 GVLGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA 174 (450)
Q Consensus 132 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-a~~~g~~v~~H~ 174 (450)
|+.++-....+- ...+.+.+.+.++. |+.-++|+.++-
T Consensus 96 Gadavlv~~P~y-----~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3a5f_A 96 GVDGLLVITPYY-----NKTTQKGLVKHFKAVSDAVSTPIIIYN 134 (291)
T ss_dssp TCSEEEEECCCS-----SCCCHHHHHHHC-CTGGGCCSCEEEEE
T ss_pred CCCEEEEcCCCC-----CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999987764331 12466777765554 666789999875
No 173
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=28.91 E-value=2.3e+02 Score=24.75 Aligned_cols=51 Identities=6% Similarity=0.038 Sum_probs=33.9
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
+.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ ...+|..++..
T Consensus 25 ~lv~~li~~Gv~gl~~~Gtt---GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~ 78 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTT---GESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGG 78 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTT---TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC
T ss_pred HHHHHHHHCCCCEEEECccc---cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC
Confidence 34555667899888764222 34467888887777777654 35789988844
No 174
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=28.53 E-value=1.9e+02 Score=25.74 Aligned_cols=50 Identities=14% Similarity=0.230 Sum_probs=33.5
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 124 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 124 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 50 lv~~li~~Gv~Gi~v~GtT---GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~ 102 (315)
T 3na8_A 50 SIERLIDGGVHAIAPLGST---GEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSD 102 (315)
T ss_dssp HHHHHHHTTCSEEECSSGG---GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC
T ss_pred HHHHHHHcCCCEEEECccc---cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC
Confidence 3556677899888764322 33457788887777777654 35789998854
No 175
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=28.03 E-value=1.9e+02 Score=26.05 Aligned_cols=80 Identities=16% Similarity=0.179 Sum_probs=0.0
Q ss_pred hHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCChhhhhhhhhhccCcCCccccccccC
Q 013050 122 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLK 201 (450)
Q Consensus 122 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (450)
.+.++.+++.|+.++...-.. .+.+.++.++-+++++.+...+++|..++
T Consensus 50 ~~lv~~li~~Gv~Gl~v~GtT---GE~~~Ls~eEr~~vi~~~~~grvpViaGv--------------------------- 99 (344)
T 2hmc_A 50 VRKGKELIADGMSAVVYCGSM---GDWPLLTDEQRMEGVERLVKAGIPVIVGT--------------------------- 99 (344)
T ss_dssp HHHHHHHHHTTCCCEEESSGG---GTGGGSCHHHHHHHHHHHHHTTCCEEEEC---------------------------
T ss_pred HHHHHHHHHcCCCEEEeCccC---cChhhCCHHHHHHHHHHHhCCCCcEEEec---------------------------
Q ss_pred CCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcch
Q 013050 202 TRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHY 266 (450)
Q Consensus 202 ~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 266 (450)
...++. +.++..+.+.+.|+.....+.|.+
T Consensus 100 ----------------------------------g~~st~-eai~la~~A~~~Gadavlv~~P~y 129 (344)
T 2hmc_A 100 ----------------------------------GAVNTA-SAVAHAVHAQKVGAKGLMVIPRVL 129 (344)
T ss_dssp ----------------------------------CCSSHH-HHHHHHHHHHHHTCSEEEECCCCS
T ss_pred ----------------------------------CCCCHH-HHHHHHHHHHhcCCCEEEECCCcc
No 176
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=27.24 E-value=3.2e+02 Score=24.01 Aligned_cols=121 Identities=12% Similarity=0.089 Sum_probs=69.3
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHH---HHHHh-cCCcEEEecCChhhhhhhhhhccCcCCcccccc
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGL---SVLAR-YKRPLLVHAEMEKGSERHVKLEDDTLDTRSYST 198 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~a~~-~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (450)
+...++++.|+.-+........+...+....+++.+++ +..++ .++++.+....+...+.+++.+- +....++
T Consensus 67 ~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~~~~V~~aAl~aGa---~iINdvs 143 (297)
T 1tx2_A 67 RHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGA---HIINDIW 143 (297)
T ss_dssp HHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECSCHHHHHHHHHHTC---CEEEETT
T ss_pred HHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCCCHHHHHHHHHcCC---CEEEECC
Confidence 44567778898777765433221222334467776665 54444 49999999999888888887622 1112222
Q ss_pred ccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCCh-----------hHHHHHHHHHHhCCCc---EEEec
Q 013050 199 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-----------SSSLDLLMEAKTNGDS---ITVET 262 (450)
Q Consensus 199 ~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~-----------~~~~~~~~~~~~~g~~---v~~~~ 262 (450)
..... ..++.++.++ +.++-+.|.... ..-.+.++.+.+.|++ +..++
T Consensus 144 g~~~d---------~~m~~~aa~~-------g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDP 205 (297)
T 1tx2_A 144 GAKAE---------PKIAEVAAHY-------DVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDP 205 (297)
T ss_dssp TTSSC---------THHHHHHHHH-------TCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCCCC---------HHHHHHHHHh-------CCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEeC
Confidence 22111 2456666666 888888886310 1233455556677775 55554
No 177
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=27.18 E-value=1.3e+02 Score=26.48 Aligned_cols=110 Identities=12% Similarity=0.125 Sum_probs=63.4
Q ss_pred cccchHHHHHHHHhCCceEEEeCCCCCCCCCCcHHHH----HHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcC
Q 013050 57 EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG 132 (450)
Q Consensus 57 ~~~~~~~~~~~~~~~GvT~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 132 (450)
..+.+....+.++.+|+..++..+...+...-+.+.. +...+....+.++-.+.. .....+..+..+...+.|
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---~~~t~~ai~la~~a~~~G 99 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVA---STSVADAVAQAKLYEKLG 99 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEE---ESSHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC---CCCHHHHHHHHHHHHHcC
Confidence 3345666777888999999887752222222223222 222333334444433322 233445566667777889
Q ss_pred CcEEEEecccCCCCCCCCCCHHHHHHHHH-HHHhcCCcEEEec
Q 013050 133 VLGLKSFMCPSGINDFPMTNASHIKEGLS-VLARYKRPLLVHA 174 (450)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 174 (450)
+.++-....+- ...+.+.+.+-++ .|+.-++||.++-
T Consensus 100 adavlv~~P~y-----~~~~~~~l~~~f~~va~a~~lPiilYn 137 (300)
T 3eb2_A 100 ADGILAILEAY-----FPLKDAQIESYFRAIADAVEIPVVIYT 137 (300)
T ss_dssp CSEEEEEECCS-----SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCEEEEcCCCC-----CCCCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 99987754332 1246666666554 4677789999886
No 178
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=27.10 E-value=2.3e+02 Score=24.91 Aligned_cols=50 Identities=18% Similarity=0.152 Sum_probs=33.6
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 124 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 124 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 37 lv~~li~~Gv~Gl~v~GtT---GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~ 89 (303)
T 2wkj_A 37 LVQFNIQQGIDGLYVGGST---GEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGC 89 (303)
T ss_dssp HHHHHHHTTCSEEEESSTT---TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECeec---cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC
Confidence 3555677899888764222 34467888887777777654 35789998854
No 179
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=27.02 E-value=2.3e+02 Score=24.65 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=34.3
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
+.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 25 ~lv~~li~~Gv~gl~~~Gtt---GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~ 78 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTT---GESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGS 78 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTT---TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC
T ss_pred HHHHHHHHCCCCEEEECccc---cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC
Confidence 34556677899998764322 34467888887777777654 35789998844
No 180
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=26.78 E-value=2.8e+02 Score=23.20 Aligned_cols=50 Identities=12% Similarity=-0.143 Sum_probs=31.6
Q ss_pred chHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEec
Q 013050 121 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 174 (450)
Q Consensus 121 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 174 (450)
..+.++.+.+.|..++......- ....+.+.+.++.+.++++|+.+..+.
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~~----~~~~~~~~~~~~~~~l~~~gl~i~~~~ 81 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFHL----PLNSTDEQIRAFHDKCAAHKVTGYAVG 81 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTS----CTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEecccC----CCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 34556666777888887754210 012456667777777888888776654
No 181
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=26.43 E-value=3.1e+02 Score=23.65 Aligned_cols=54 Identities=15% Similarity=0.083 Sum_probs=36.3
Q ss_pred chHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCC-cEEEec
Q 013050 121 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKR-PLLVHA 174 (450)
Q Consensus 121 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~-~v~~H~ 174 (450)
..+.++...+.|..++..+...+.....+..+.+.+.++.+.++++|+ .+.+|.
T Consensus 20 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~ 74 (303)
T 3aal_A 20 LLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHA 74 (303)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEec
Confidence 455677777889999988654321111122345667778888899999 788897
No 182
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=26.18 E-value=44 Score=23.78 Aligned_cols=42 Identities=10% Similarity=0.121 Sum_probs=30.8
Q ss_pred CCCHHHHHHHHhhchhHHhCCCCCCccc-----cCCCccEEEEeCCC
Q 013050 352 GVTLEQLASWWSERPAKLAGQVSKGAIA-----IGNHADLVVWEPEA 393 (450)
Q Consensus 352 gls~~~al~~aT~~~A~~lg~~~~G~I~-----~G~~ADlvv~d~~~ 393 (450)
+++++++.+.-....|++..+...|.+. +|.++++-|||.+.
T Consensus 14 ~~~~~~~~~~~a~Eka~a~eLq~~G~~~~lWRv~G~y~nisIfdv~s 60 (96)
T 1mli_A 14 DMDPAKATQLKADEKELAQRLQREGTWRHLWRIAGHYANYSVFDVPS 60 (96)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeeEEEEEecCCccEEEEEEcCC
Confidence 4777777777777777766663344442 99999999999775
No 183
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=25.79 E-value=3.8e+02 Score=24.36 Aligned_cols=184 Identities=14% Similarity=0.065 Sum_probs=100.9
Q ss_pred chHHHHHHHHcCCcEEEEe-cccCCC-CC-----------CCCCCHHHHHHHHHHHHhcCCcEEE-ecCChhhhhhhhhh
Q 013050 121 NASALEALLNAGVLGLKSF-MCPSGI-ND-----------FPMTNASHIKEGLSVLARYKRPLLV-HAEMEKGSERHVKL 186 (450)
Q Consensus 121 ~~~~~~~~~~~g~~~~~~~-~~~~~~-~~-----------~~~~~~~~l~~~~~~a~~~g~~v~~-H~~~~~~~~~~~~~ 186 (450)
.+..++.+.+.|+..+..- .+.... ++ ...++ +.=++++++..+.|+.|.+ |+.+
T Consensus 147 ~l~~L~~~y~lGvR~~~Lt~n~~N~~a~g~~~~~~~~~~~~~GLT-~~G~~vV~emnrlGmivDlSH~s~---------- 215 (364)
T 3ly0_A 147 DLDALHLFHSLGLRSLGPVWSRPTVFGHGVPFRFPGSPDTGEGLT-EAGRRLVAECNRLKIMLDLSHLNE---------- 215 (364)
T ss_dssp TCHHHHHHHHHTEEEEESCSSSCBTTBCBCCCEESCCSCCSCCCC-HHHHHHHHHHHHHTCEEBCTTBCH----------
T ss_pred CHHHHHHHHHhCCeEEEeeccCCCccccccccccCCCCCCCCCCC-HHHHHHHHHHHHcCCEEEcCCCCH----------
Confidence 4667888888888766542 111000 00 01122 4557788889999998765 3321
Q ss_pred ccCcCCccccccccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCCh-------hHHHHHHHHHHhCCCcEE
Q 013050 187 EDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-------SSSLDLLMEAKTNGDSIT 259 (450)
Q Consensus 187 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~-------~~~~~~~~~~~~~g~~v~ 259 (450)
.....+++++ ..|+.++|.+.. .-+-++++.+++.|-.+-
T Consensus 216 -----------------------~t~~dvl~~s----------~~PviaSHSnaral~~h~RNl~De~l~ala~~GGvig 262 (364)
T 3ly0_A 216 -----------------------KGFDDVARLS----------DAPLVATHSNAHAVTPSTRNLTDRQLAMIRESRGMVG 262 (364)
T ss_dssp -----------------------HHHHHHHHHC----------SSCCEETTCCBTTTSCCTTSBCHHHHHHHHHTTCEEE
T ss_pred -----------------------HHHHHHHHhc----------CCCeEEeCCchhhcCCCCCCCCHHHHHHHHHcCcEEE
Confidence 1123333332 556777887531 134567777777776666
Q ss_pred EecCcchhcccccccCCCCCceEEcCCCCChhhHHHHHHHHh-cCC-eeEEcCCCCCCChhhhcccCCCccccCCCCcch
Q 013050 260 VETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALM-DGH-IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSL 337 (450)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~-~~~~gtD~~~~~~~~~~~~~~~~~~~~~g~~~~ 337 (450)
+..++.++.-+... .+........+.+....+ .|+ ++++|||..... .+.|+...
T Consensus 263 v~f~~~fl~~~~~~----------~~~~tl~~~~~Hi~hi~~l~G~dhVgiGsDfdG~~-------------~p~gl~d~ 319 (364)
T 3ly0_A 263 LNFATSFLREDGRR----------SAEMGWEPVLRHLDHLIDRLGEDHVGMGSDFDGAT-------------IPQGIADV 319 (364)
T ss_dssp ECCCHHHHSTTCCC----------CSCCCSHHHHHHHHHHHHHHCTTSEEECCCBTTSC-------------CCTTTCSG
T ss_pred EeccHhhhcCCCCC----------CCCCCHHHHHHHHHHHHHhcCCCeEEECCCCCCCC-------------CCCCCCCH
Confidence 65566554321100 000011111222221111 254 589999953211 12233333
Q ss_pred hhHHHHHHHHHHhcCCCHHHHHHHHhhchhHHhCC
Q 013050 338 QFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ 372 (450)
Q Consensus 338 ~~~~~~~~~~~~~~gls~~~al~~aT~~~A~~lg~ 372 (450)
.. ++.+...+.+.|+|.+++-+.+-.|.-+.|..
T Consensus 320 s~-~p~L~~~L~~rG~se~~i~ki~g~N~lRvl~~ 353 (364)
T 3ly0_A 320 TG-LPALQAAMRAHGYDEPLMRKLCHENWYGLLER 353 (364)
T ss_dssp GG-HHHHHHHHHHHTCCHHHHHHHHTHHHHHHHHH
T ss_pred HH-HHHHHHHHHHCCCCHHHHHHHHhHhHHHHHHH
Confidence 33 56666777788999999999999999888865
No 184
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=25.65 E-value=56 Score=28.75 Aligned_cols=36 Identities=22% Similarity=0.009 Sum_probs=27.3
Q ss_pred ceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeCC
Q 013050 43 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMP 80 (450)
Q Consensus 43 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~~ 80 (450)
++|.|+|.... ..........+.+.+.|+..+.-..
T Consensus 3 ~~DLH~Ht~~S--Dg~~~~~elv~~A~~~Gl~~iaiTD 38 (292)
T 2yb1_A 3 NIDLHFHSRTS--DGALTPTEVIDRAAARAPALLALTD 38 (292)
T ss_dssp CEECCBCCTTT--TCSSCHHHHHHHHHTTCCSEEEECC
T ss_pred ccccccCCCcc--CCCCCHHHHHHHHHHCCCCEEEEec
Confidence 78999998755 2334577788899999999876553
No 185
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=25.40 E-value=2.4e+02 Score=25.07 Aligned_cols=80 Identities=14% Similarity=0.157 Sum_probs=0.0
Q ss_pred hHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhc---CCcEEEecCChhhhhhhhhhccCcCCcccccc
Q 013050 122 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEMEKGSERHVKLEDDTLDTRSYST 198 (450)
Q Consensus 122 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (450)
.+.++.+++.|+.++...-.. .+.+.++.++-.++++.+.+. +.+|..++
T Consensus 35 ~~lv~~li~~Gv~gl~v~GtT---GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv------------------------ 87 (318)
T 3qfe_A 35 ERYYAYLARSGLTGLVILGTN---AEAFLLTREERAQLIATARKAVGPDFPIMAGV------------------------ 87 (318)
T ss_dssp HHHHHHHHTTTCSEEEESSGG---GTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC------------------------
T ss_pred HHHHHHHHHcCCCEEEeCccc---cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC------------------------
Q ss_pred ccCCCChHHHHHHHHHHHHHHHhhccCCCCCCceEEEEecCChhHHHHHHHHHHhCCCcEEEecCcch
Q 013050 199 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHY 266 (450)
Q Consensus 199 ~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 266 (450)
...++. +.++..+.+.+.|+.....+.|.|
T Consensus 88 -------------------------------------g~~~t~-~ai~la~~a~~~Gadavlv~~P~y 117 (318)
T 3qfe_A 88 -------------------------------------GAHSTR-QVLEHINDASVAGANYVLVLPPAY 117 (318)
T ss_dssp -------------------------------------CCSSHH-HHHHHHHHHHHHTCSEEEECCCCC
T ss_pred -------------------------------------CCCCHH-HHHHHHHHHHHcCCCEEEEeCCcc
No 186
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=25.28 E-value=3.1e+02 Score=23.13 Aligned_cols=116 Identities=14% Similarity=0.074 Sum_probs=65.6
Q ss_pred hHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCC-cEEEecCChhhhhhhhhhccCcCCcccccccc
Q 013050 122 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKR-PLLVHAEMEKGSERHVKLEDDTLDTRSYSTYL 200 (450)
Q Consensus 122 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~-~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (450)
.+.+..+.+.|..++..+...+........+.+.+.++.+.++++|+ .+.+|..-.. ...
T Consensus 17 ~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~-------------------~l~ 77 (270)
T 3aam_A 17 AGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLV-------------------NLG 77 (270)
T ss_dssp HHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTC-------------------CTT
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCccc-------------------CCC
Confidence 45566677788888887653321111123456788888888999999 8889873110 000
Q ss_pred CCCChH--HHHHHHHHHHHHHHhhccCCCCCCceEEEEecCCh-----hHHHHHHHHHH--hCCCcEEEecCc
Q 013050 201 KTRPPS--WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-----SSSLDLLMEAK--TNGDSITVETCP 264 (450)
Q Consensus 201 ~~~p~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~h~~~~-----~~~~~~~~~~~--~~g~~v~~~~~~ 264 (450)
. .+.. ...+.+.+.++++... |.+....|.... .+.+..+.... +.|+.+..+..+
T Consensus 78 s-~~~~r~~~~~~~~~~i~~a~~l-------Ga~~vv~h~g~~~~~~~~~~l~~l~~~a~~~~gv~l~lEn~~ 142 (270)
T 3aam_A 78 A-EGELWEKSVASLADDLEKAALL-------GVEYVVVHPGSGRPERVKEGALKALRLAGVRSRPVLLVENTA 142 (270)
T ss_dssp C-SSTHHHHHHHHHHHHHHHHHHH-------TCCEEEECCCBSCHHHHHHHHHHHHHHHTCCSSSEEEEECCC
T ss_pred C-CHHHHHHHHHHHHHHHHHHHHc-------CCCEEEECCCCCCHHHHHHHHHHHHHhhcccCCCEEEEecCC
Confidence 1 1211 2344667788888876 766666665531 02233332322 356666666543
No 187
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=25.25 E-value=57 Score=27.95 Aligned_cols=35 Identities=14% Similarity=0.101 Sum_probs=25.9
Q ss_pred ceeeccccCCCCCCcccchHHHHHHHHhCCceEEEeC
Q 013050 43 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDM 79 (450)
Q Consensus 43 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~~ 79 (450)
++|.|+|.... ....++....+.+.+.|+..+.-.
T Consensus 21 ~~DlH~Ht~~S--Dg~~t~ee~v~~A~~~Gl~~i~iT 55 (255)
T 2anu_A 21 LCDFHVHTNMS--DGHLPLGEVVDLFGKHGVDVVSIT 55 (255)
T ss_dssp EEEEEECCTTT--TCSSCHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEeecCCCc--CCCCCHHHHHHHHHHCCCCEEEEc
Confidence 69999998754 233457778888899999876544
No 188
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=24.83 E-value=2.6e+02 Score=24.75 Aligned_cols=51 Identities=10% Similarity=0.117 Sum_probs=34.5
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhc--CCcEEEecCC
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY--KRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~--g~~v~~H~~~ 176 (450)
+.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+. +.+|..++..
T Consensus 33 ~lv~~li~~Gv~Gl~v~GtT---GE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~ 85 (313)
T 3dz1_A 33 RLTDFYAEVGCEGVTVLGIL---GEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSA 85 (313)
T ss_dssp HHHHHHHHTTCSEEEESTGG---GTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred HHHHHHHHCCCCEEEeCccC---cChhhCCHHHHHHHHHHHHHHcCCCcEEEecCC
Confidence 34556677899998764322 334578888877777776554 6889998844
No 189
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=24.74 E-value=2.5e+02 Score=24.69 Aligned_cols=50 Identities=22% Similarity=0.187 Sum_probs=33.3
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 124 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 124 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 38 lv~~li~~Gv~gl~v~GtT---GE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~ 90 (306)
T 1o5k_A 38 LVRYQLENGVNALIVLGTT---GESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGT 90 (306)
T ss_dssp HHHHHHHTTCCEEEESSGG---GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HHHHHHHcCCCEEEeCccc---cchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCC
Confidence 4555677899888764322 33457788887777777654 35789998844
No 190
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=23.83 E-value=2.2e+02 Score=24.93 Aligned_cols=51 Identities=16% Similarity=0.233 Sum_probs=33.8
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
+.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 25 ~lv~~li~~Gv~gl~~~Gtt---GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~ 78 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCGTT---GESPTLSKSEHEQVVEITIKTANGRVPVIAGAGS 78 (292)
T ss_dssp HHHHHHHHTTCSEEETTSGG---GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC
T ss_pred HHHHHHHHcCCCEEEECccc---cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC
Confidence 34556677899888653221 33457888887777777654 35789988844
No 191
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=23.81 E-value=2e+02 Score=24.12 Aligned_cols=47 Identities=15% Similarity=0.072 Sum_probs=34.4
Q ss_pred hHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEec
Q 013050 122 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 174 (450)
Q Consensus 122 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 174 (450)
.+.++.+.+.|+.++....-.+ ....+.+.++++++.|+ ++++.+|-
T Consensus 79 ~~Di~~~~~~GadGvV~G~Lt~----dg~iD~~~~~~Li~~a~--~~~vTFHR 125 (224)
T 2bdq_A 79 EEDILRAVELESDALVLGILTS----NNHIDTEAIEQLLPATQ--GLPLVFHM 125 (224)
T ss_dssp HHHHHHHHHTTCSEEEECCBCT----TSSBCHHHHHHHHHHHT--TCCEEECG
T ss_pred HHHHHHHHHcCCCEEEEeeECC----CCCcCHHHHHHHHHHhC--CCeEEEEC
Confidence 3456667779999997743222 12578899999998776 89999996
No 192
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=23.50 E-value=3.2e+02 Score=24.08 Aligned_cols=51 Identities=16% Similarity=0.167 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhc---CCcEEEecCC
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~ 176 (450)
+.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+. +.+|..++..
T Consensus 32 ~lv~~li~~Gv~Gl~v~GtT---GE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~ 85 (311)
T 3h5d_A 32 ALIEHLLAHHTDGILLAGTT---AESPTLTHDEELELFAAVQKVVNGRVPLIAGVGT 85 (311)
T ss_dssp HHHHHHHHTTCCCEEESSTT---TTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccc---cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC
Confidence 44566677899888764322 344678888888888876653 5789998854
No 193
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=23.13 E-value=2.8e+02 Score=24.83 Aligned_cols=51 Identities=12% Similarity=0.075 Sum_probs=34.0
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
+.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtT---GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~ 112 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGST---GIYMYLTREERRRAIEAAATILRGRRTLMAGIGA 112 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTT---TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccc---cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC
Confidence 34555677899888764322 34467888887777777654 35789888844
No 194
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=22.94 E-value=2.7e+02 Score=24.26 Aligned_cols=51 Identities=14% Similarity=0.051 Sum_probs=34.0
Q ss_pred HHHHHHHH-cCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 123 SALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
+.++.+++ .|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 28 ~lv~~li~~~Gv~gl~~~Gtt---GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~ 82 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGST---GENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGS 82 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGG---GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC
T ss_pred HHHHHHHhhCCCcEEEeCccc---cchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCC
Confidence 34556677 899888764322 33457888887777776654 35789988844
No 195
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=22.86 E-value=3.9e+02 Score=23.51 Aligned_cols=72 Identities=18% Similarity=0.122 Sum_probs=46.3
Q ss_pred HHHHHHHhcCCceEEEEeccccCCC--ccchHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEE
Q 013050 94 KLKVDAAEKRIYVDVGFWGGLVPEN--AYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLL 171 (450)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~ 171 (450)
....+.+.....+.+..++...... ....+.+.++.+.|..++..+. +..+.+...+..+.|+++|+.+.
T Consensus 186 ~eaI~~I~~aGGvaVLAHP~r~~~~r~~~~~~~l~~l~~~GldgIEv~~--------~~~~~~~~~~~~~lA~~~gL~~t 257 (301)
T 3o0f_A 186 HEVIAAVKGAGGVVVAAHAGDPQRNRRLLSDEQLDAMIADGLDGLEVWH--------RGNPPEQRERLLTIAARHDLLVT 257 (301)
T ss_dssp HHHHHHHHHTTCEEEECSTTCTTTCSSCCCHHHHHHHHHHTCCEEEEES--------TTSCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHCCCEEEecChhhhccccccCcHHHHHHHHHCCCCEEEEeC--------CCCCHHHHHHHHHHHHHcCCceE
Confidence 3334444444455555554322211 2234677888889999998865 23567888899999999999877
Q ss_pred Ee
Q 013050 172 VH 173 (450)
Q Consensus 172 ~H 173 (450)
.=
T Consensus 258 gG 259 (301)
T 3o0f_A 258 GG 259 (301)
T ss_dssp EC
T ss_pred EE
Confidence 63
No 196
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=22.83 E-value=77 Score=27.74 Aligned_cols=36 Identities=11% Similarity=-0.094 Sum_probs=25.5
Q ss_pred ceeeccccCCCCCCcccchHHHHHHHHhCCceEEEe
Q 013050 43 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLID 78 (450)
Q Consensus 43 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvT~~~~ 78 (450)
++|.|+|...........+....+.+...|++.+.-
T Consensus 2 ~~D~H~Ht~~s~~~~~~~~~e~~~~A~~~G~~~i~~ 37 (283)
T 3dcp_A 2 KRDGHTHTEFCPHGTHDDVEEMVLKAIELDFDEYSI 37 (283)
T ss_dssp CEEEEECCTTCTTSCCCCHHHHHHHHHHTTCCEEEE
T ss_pred CeEEeeCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE
Confidence 589999985543222235778888999999886654
No 197
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=22.82 E-value=1.2e+02 Score=30.20 Aligned_cols=106 Identities=21% Similarity=0.151 Sum_probs=59.9
Q ss_pred HHHHHHHhCCceEEEe-CCCCCCCCCC------cHHHHHHHHHHHhcCCceEEEEeccccCCCccchHHHHHHHHcCCcE
Q 013050 63 SGTKAAAAGGITTLID-MPLNSDPSTI------STETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLG 135 (450)
Q Consensus 63 ~~~~~~~~~GvT~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 135 (450)
.-...+.+.|+-.++. .+ -...... ....+....+.+..+ .+.+..|........+..+.++.+.+-|+.+
T Consensus 313 ~yIDfAa~~G~~yvlvD~g-W~~~~~~d~~~~~p~~di~~l~~Ya~~k-gV~i~lw~~~~~~~~~~~~~~~~~~~~Gv~g 390 (641)
T 3a24_A 313 AYIDFASANGIEYVILDEG-WAVNLQADLMQVVKEIDLKELVDYAASK-NVGIILWAGYHAFERDMENVCRHYAEMGVKG 390 (641)
T ss_dssp HHHHHHHHTTCCEEEECTT-SBCTTSCCTTCBCTTCCHHHHHHHHHHT-TCEEEEEEEHHHHHTSHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHcCCCEEEEecc-cccCCCCCccccCCcCCHHHHHHHHHhc-CCEEEEEeeCcchHHHHHHHHHHHHHcCCCE
Confidence 3455778889888763 22 1100000 001233333333333 3555554332222223345777888899999
Q ss_pred EEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEec
Q 013050 136 LKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 174 (450)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 174 (450)
+|.-..... .........++++.|.++++.|..|-
T Consensus 391 vK~Df~~~~----~Q~~v~~y~~i~~~aA~~~l~V~fHg 425 (641)
T 3a24_A 391 FKVDFMDRD----DQEMTAFNYRAAEMCAKYKLILDLHG 425 (641)
T ss_dssp EEEECCCCC----SHHHHHHHHHHHHHHHHTTCEEEECS
T ss_pred EEECCCCCC----cHHHHHHHHHHHHHHHHcCCEEEcCC
Confidence 998432211 13445667789999999999999996
No 198
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=22.66 E-value=87 Score=27.70 Aligned_cols=48 Identities=13% Similarity=0.119 Sum_probs=34.2
Q ss_pred HHHHHHHcCCcEEEE--ecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEe
Q 013050 124 ALEALLNAGVLGLKS--FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVH 173 (450)
Q Consensus 124 ~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 173 (450)
.+++.++.|+.+++. ++.+.+. ......+.+.++.+.++++|+++.++
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~--~e~~~l~~la~vv~ea~~~GlP~~~e 182 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDA--GTAPTLEATAHAVNEAAAAQLPIMLE 182 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCT--THHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHCCCCEEEEEEEECCCCh--hHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 578888889999883 3433221 11234567778899999999999998
No 199
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=21.88 E-value=2.5e+02 Score=24.59 Aligned_cols=51 Identities=16% Similarity=0.223 Sum_probs=33.8
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
+.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+.+|..++..
T Consensus 25 ~lv~~li~~Gv~gi~v~Gtt---GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~ 78 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVGTT---GESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGS 78 (297)
T ss_dssp HHHHHHHHTTCSEEECSSGG---GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC
T ss_pred HHHHHHHHcCCCEEEECccc---cchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCC
Confidence 34556677899888663222 33457888887777777654 35788888844
No 200
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=21.86 E-value=2.7e+02 Score=25.01 Aligned_cols=50 Identities=22% Similarity=0.242 Sum_probs=33.4
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHh---cCCcEEEecCC
Q 013050 124 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR---YKRPLLVHAEM 176 (450)
Q Consensus 124 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~ 176 (450)
.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+ .+++|..++..
T Consensus 57 lv~~li~~Gv~Gl~v~GtT---GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~ 109 (343)
T 2v9d_A 57 LIDDLIKAGVDGLFFLGSG---GEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGG 109 (343)
T ss_dssp HHHHHHHTTCSCEEESSTT---TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCS
T ss_pred HHHHHHHcCCCEEEeCccc---cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC
Confidence 4555677888887664222 34467888887777776554 35789998854
No 201
>2q01_A Uronate isomerase; structural genomics, protein structure initiative NEW YORK SGX research center for structural genomics, nysgx; 2.34A {Caulobacter crescentus}
Probab=21.61 E-value=5.3e+02 Score=24.57 Aligned_cols=28 Identities=11% Similarity=-0.060 Sum_probs=20.8
Q ss_pred HHHHhcCCCHHHHHHHHh----hchhHHhCCC
Q 013050 346 SYGRKYGVTLEQLASWWS----ERPAKLAGQV 373 (450)
Q Consensus 346 ~~~~~~gls~~~al~~aT----~~~A~~lg~~ 373 (450)
.++.+..+|.+||.+.+. .|+.++++++
T Consensus 442 ~~V~~~~lse~eA~r~a~~l~~~Na~r~Y~l~ 473 (497)
T 2q01_A 442 RMVAEHRMDLVEAEELIVDLTYNLPKKAYKLD 473 (497)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHTHHHHHHTTCC
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHhHHHHhCCC
Confidence 345667799998877655 4788899983
No 202
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=21.51 E-value=4e+02 Score=23.08 Aligned_cols=51 Identities=12% Similarity=-0.003 Sum_probs=33.6
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 013050 123 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 176 (450)
Q Consensus 123 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 176 (450)
+.++.+++.|+.++...-.. .+.+.++.++-+++++.+.+.-..|..++..
T Consensus 23 ~lv~~li~~Gv~gl~v~Gtt---GE~~~Ls~~Er~~v~~~~~~~~~gvi~Gvg~ 73 (286)
T 2r91_A 23 NHVKNITSKGVDVVFVAGTT---GLGPALSLQEKMELTDAATSAARRVIVQVAS 73 (286)
T ss_dssp HHHHHHHHTTCCEEEETSTT---TTGGGSCHHHHHHHHHHHHHHCSSEEEECCC
T ss_pred HHHHHHHHCCCCEEEECccc---cChhhCCHHHHHHHHHHHHHHhCCEEEeeCC
Confidence 34556677899888764222 3446788888888888876642227777743
No 203
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=21.40 E-value=3.9e+02 Score=22.97 Aligned_cols=44 Identities=16% Similarity=0.212 Sum_probs=32.2
Q ss_pred chHHHHHHHHcCCcEEEEecccCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 013050 121 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM 176 (450)
Q Consensus 121 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 176 (450)
..+...++++.|+.+++. .+ -+++...++.+.+.|+||+.|..-
T Consensus 96 a~~~a~rl~kaGa~aVkl-------Eg-----g~e~~~~I~al~~agipV~gHiGL 139 (264)
T 1m3u_A 96 AFENAATVMRAGANMVKI-------EG-----GEWLVETVQMLTERAVPVCGHLGL 139 (264)
T ss_dssp HHHHHHHHHHTTCSEEEC-------CC-----SGGGHHHHHHHHHTTCCEEEEEES
T ss_pred HHHHHHHHHHcCCCEEEE-------CC-----cHHHHHHHHHHHHCCCCeEeeecC
Confidence 345556888899999996 22 134566677778899999999943
No 204
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=20.03 E-value=2e+02 Score=28.93 Aligned_cols=53 Identities=21% Similarity=0.275 Sum_probs=36.6
Q ss_pred hHHHHHHHHcCCcEEEE-ecc---cCCCCCCCCCCHHHHHHHHHHHHhcCCcEEEec
Q 013050 122 ASALEALLNAGVLGLKS-FMC---PSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 174 (450)
Q Consensus 122 ~~~~~~~~~~g~~~~~~-~~~---~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 174 (450)
.+.+..+.+.|+.++|. |++ ..+.............++++.|.++++.|..|-
T Consensus 452 d~~f~~~~~~Gv~GVKvdF~g~~~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnfHg 508 (738)
T 2d73_A 452 DKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAADYKIMVNAHE 508 (738)
T ss_dssp HHHHHHHHHTTCCEEEEECCSSCBSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEETT
T ss_pred HHHHHHHHHcCCCEEEeCccccCcCCcccccchHHHHHHHHHHHHHHHcCcEEEccC
Confidence 45777778899999998 332 111001112344667789999999999999996
Done!