BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013054
(450 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14308|SWC4_SCHPO SWR1-complex protein 4 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=swc4 PE=3 SV=2
Length = 437
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 143/245 (58%), Gaps = 16/245 (6%)
Query: 2 DAKDILGIPKTQLPTTQEKKSRPQKEPQRKPDGISREVYALTG-GLAPLMPSIDVSQLKK 60
D +D+ +P ++ Q+ K+ +R+P+GISRE+Y+L G APL +I + K+
Sbjct: 5 DIRDVFELPPPEIGNKQKSKT----PTERRPEGISRELYSLLGENSAPL--AIYQKKFKE 58
Query: 61 RPPSDEKI-TWQWLPFTNSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDVVKYTDE 119
+P K W PF+ S+RKD+ L+HWV + + V Y F K+N + ++ YTDE
Sbjct: 59 KPKVSHKAKNWVRQPFSISSRKDDFTLHHWV-LKSEVDSEASYKFEKFNVPLFIIDYTDE 117
Query: 120 EYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFPS-----SRTVEELKDRYYGVSR 174
EY+ YL D W K+ETD LF LC+ +DLRF VIADR+ + RT+E+LKDR+Y VSR
Sbjct: 118 EYQNYLKDEDWNKDETDYLFRLCKDYDLRFFVIADRYDNEKYKKHRTLEDLKDRFYSVSR 177
Query: 175 AILIARAP--SPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKR 232
IL+AR P S T L YN QEV RK+ L + S+T + ++ + E KR
Sbjct: 178 KILLARNPINSMTAAQSSLLNTMEYNKEQEVIRKKYLIGLASRTPEEVAEEEALFIELKR 237
Query: 233 ITDSR 237
I S+
Sbjct: 238 IETSQ 242
>sp|Q9NPF5|DMAP1_HUMAN DNA methyltransferase 1-associated protein 1 OS=Homo sapiens
GN=DMAP1 PE=1 SV=1
Length = 467
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 181/375 (48%), Gaps = 62/375 (16%)
Query: 30 RKPDGISREVYAL----TGGLAPLMPSIDVSQ----LKKRPPSDEKITWQWLPFTNSARK 81
++P+G+ REVYAL PL+PS D Q +K + S + W+W+PFTN ARK
Sbjct: 48 KRPEGMHREVYALLYSDKKDAPPLLPS-DTGQGYRTVKAKLGSKKVRPWKWMPFTNPARK 106
Query: 82 DNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFEL 141
D +HW R DY FA++NK+V V Y+++EY+ YL D WTK ETD LF+L
Sbjct: 107 DGAMFFHWRRAAE---EGKDYPFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDL 163
Query: 142 CERFDLRFIVIADRFPSS----RTVEELKDRYYGVSRAILIARAPSPTDVSGHPLVKDP- 196
RFDLRF+VI DR+ R+VE+LK+RYY + + RA TD +K P
Sbjct: 164 SRRFDLRFVVIHDRYDHQQFKKRSVEDLKERYYHICAKLANVRAVPGTD------LKIPV 217
Query: 197 YNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRITDSRMASRAAEEPEMPVASHVGS 256
++ E RK L + ++T Q ++ +L E ++I ++R R S
Sbjct: 218 FDAGHERRRKEQLERLYNRTPEQVAEEEYLLQELRKI-EARKKEREKR-----------S 265
Query: 257 ESADRAVVLGDTVSPSSNIQ-------LPSAT-----VVPSTSIIA--DSASTLASLRML 302
+ + + DT + + LP VP T+ I D S +LR
Sbjct: 266 QDLQKLITAADTTAEQRRTERKAPKKKLPQKKEAEKPAVPETAGIKFPDFKSAGVTLRSQ 325
Query: 303 RVYLRTYALEQMVQAASSSAGLRTIKRVEQALQELGVNLKPKVPTKAVCAEHLELRKEIL 362
R+ L SS G + IK +EQ L ELGV L P PT+ + ELR +++
Sbjct: 326 RMKL------------PSSVGQKKIKALEQMLLELGVELSP-TPTEELVHMFNELRSDLV 372
Query: 363 TLLNLQKQLQYKEAE 377
L L++ E E
Sbjct: 373 LLYELKQACANCEYE 387
>sp|Q9JI44|DMAP1_MOUSE DNA methyltransferase 1-associated protein 1 OS=Mus musculus
GN=Dmap1 PE=1 SV=1
Length = 468
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 181/375 (48%), Gaps = 62/375 (16%)
Query: 30 RKPDGISREVYAL----TGGLAPLMPSIDVSQ----LKKRPPSDEKITWQWLPFTNSARK 81
++P+G+ REVYAL PL+PS D Q +K + S + W+W+PFTN ARK
Sbjct: 48 KRPEGMHREVYALLYSDKKDAPPLLPS-DTGQGYRTVKAKLGSKKVRPWKWMPFTNPARK 106
Query: 82 DNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFEL 141
D +HW R DY FA++NK+V V Y+++EY+ YL D WTK ETD LF+L
Sbjct: 107 DGAMFFHWRRAAE---EGKDYPFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDL 163
Query: 142 CERFDLRFIVIADRFPSS----RTVEELKDRYYGVSRAILIARAPSPTDVSGHPLVKDP- 196
RFDLRF+VI DR+ R+VE+LK+RYY + + RA TD +K P
Sbjct: 164 SRRFDLRFVVIHDRYDHQQFKKRSVEDLKERYYHICAKLANVRAVPGTD------LKIPV 217
Query: 197 YNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRITDSRMASRAAEEPEMPVASHVGS 256
++ E RK L + ++T Q ++ +L E ++I ++R R S
Sbjct: 218 FDAGHERRRKEQLERLYNRTPEQVAEEEYLLQELRKI-EARKKEREKR-----------S 265
Query: 257 ESADRAVVLGDTVSPSSNIQ-------LPSAT-----VVPSTSIIA--DSASTLASLRML 302
+ + + DT + + LP VP T+ I D S +LR
Sbjct: 266 QDLQKLITAADTTAEQRRTERKAPKKKLPQKKEAEKPAVPETAGIKFPDFKSAGVTLRSQ 325
Query: 303 RVYLRTYALEQMVQAASSSAGLRTIKRVEQALQELGVNLKPKVPTKAVCAEHLELRKEIL 362
R+ L SS G + IK +EQ L ELGV L P PT+ + ELR +++
Sbjct: 326 RMKL------------PSSVGQKKIKALEQMLLELGVELSP-TPTEELVHMFNELRSDLV 372
Query: 363 TLLNLQKQLQYKEAE 377
L L++ E E
Sbjct: 373 LLYELKQACANCEYE 387
>sp|P0CO96|SWC4_CRYNJ SWR1-complex protein 4 OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=SWC4 PE=3
SV=1
Length = 463
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 141/261 (54%), Gaps = 22/261 (8%)
Query: 1 MDAKDILGI----PKTQLPTTQEKKSRPQKEPQRKPDGISREVYALTGGLAPLMP----S 52
M A+D+ I P T LPT K P RKPDGI+RE+YAL G AP + S
Sbjct: 1 MSAQDVRSILSLPPSTPLPTLSSSKKVPVP---RKPDGITRELYALIGDNAPSLADAQAS 57
Query: 53 IDVSQLKKRPP-SDEKITWQWLPFTNSARKDN-LQLYHWVRVVNGVPPTGDYSFAKYN-K 109
+ + +++P +K+ W+W FT +AR+DN ++L HW R+ + P F K+N
Sbjct: 58 LAAVKYREKPALKGKKVHWEWTKFTPAARRDNPVRLGHWARITDSDPNDSVEYFGKFNLH 117
Query: 110 SVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFP--------SSRT 161
V++Y+ EY+++L DP WT +ET+ LFEL + +DLRFIV ADR+ R+
Sbjct: 118 GPSVMEYSQFEYDQHLVDPNWTLQETEYLFELLKEYDLRFIVAADRYAYVSPEGEKRKRS 177
Query: 162 VEELKDRYYGVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQER 221
VE++KDRYY + R ++ R S H + ++ ++E++RK+ S + T +
Sbjct: 178 VEDMKDRYYTICRRLIRTRTASDPVHQQHLIQAYAFDKAREIKRKQYASDLFHLTPAEIA 237
Query: 222 KDAEVLAEAKRITDSRMASRA 242
++ + E R+ + RA
Sbjct: 238 EEEALYVEITRMQQNERRFRA 258
>sp|P0CO97|SWC4_CRYNB SWR1-complex protein 4 OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=SWC4 PE=3 SV=1
Length = 463
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 141/261 (54%), Gaps = 22/261 (8%)
Query: 1 MDAKDILGI----PKTQLPTTQEKKSRPQKEPQRKPDGISREVYALTGGLAPLMP----S 52
M A+D+ I P T LPT K P RKPDGI+RE+YAL G AP + S
Sbjct: 1 MSAQDVRSILSLPPSTPLPTLSSSKKVPVP---RKPDGITRELYALIGDNAPSLADAQAS 57
Query: 53 IDVSQLKKRPP-SDEKITWQWLPFTNSARKDN-LQLYHWVRVVNGVPPTGDYSFAKYN-K 109
+ + +++P +K+ W+W FT +AR+DN ++L HW R+ + P F K+N
Sbjct: 58 LAAVKYREKPALKGKKVHWEWTKFTPAARRDNPVRLGHWARITDSDPNDSVEYFGKFNLH 117
Query: 110 SVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFP--------SSRT 161
V++Y+ EY+++L DP WT +ET+ LFEL + +DLRFIV ADR+ R+
Sbjct: 118 GPSVMEYSQFEYDQHLVDPNWTLQETEYLFELLKEYDLRFIVAADRYAYVSPEGEKRKRS 177
Query: 162 VEELKDRYYGVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQER 221
VE++KDRYY + R ++ R S H + ++ ++E++RK+ S + T +
Sbjct: 178 VEDMKDRYYTICRRLIRTRTASDPVHQQHLIQAYAFDKAREIKRKQYASDLFHLTPAEIA 237
Query: 222 KDAEVLAEAKRITDSRMASRA 242
++ + E R+ + RA
Sbjct: 238 EEEALYVEITRMQQNERRFRA 258
>sp|Q4WNY4|SWC4_ASPFU SWR1-complex protein 4 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=swc4 PE=3
SV=1
Length = 588
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 147/288 (51%), Gaps = 59/288 (20%)
Query: 2 DAKDILGIPKTQLPTTQEKKSRPQKEPQ---RKPDGISREVYALTGGLAPLMPSIDVSQL 58
D +D+L +P P +K+ +K P + +GI+RE+YAL G AP + +I+ ++
Sbjct: 5 DVRDMLDLPAEGQPRPHKKQKVVEKRPDTDVQASEGITRELYALLGERAPPI-AINENRY 63
Query: 59 KKRPPSDEKIT---WQWLPFTNSARKDNLQLYHWVR--------VVNGVP---------- 97
K RP K+ WQ PFTN+AR D L L HW R + G
Sbjct: 64 KGRPKWMSKLRVRPWQMTPFTNNARSDGLVLRHWQRQSESAKAPALEGASEMEVDQAKAG 123
Query: 98 -----PTGDYSFAKYNKSVDV-VKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIV 151
P +Y FAKYN V +YTDEEY ++L W+++ETD L +L E +DLR++V
Sbjct: 124 GGAATPEKEYPFAKYNVKPRVPRRYTDEEYNRHLKSDDWSRQETDYLMDLVEEYDLRWVV 183
Query: 152 IADRF-----------------PSS--RTVEELKDRYYGVSRAILIARAPSPTDVS---- 188
IADR+ P+ RT+E++K RYY ++ ++L P P+++S
Sbjct: 184 IADRYDFQPQPIDAEANATALVPAKQYRTMEQMKARYYFIAASMLALEHP-PSEMSEAEF 242
Query: 189 --GHPLVKDPYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRIT 234
++K ++ +E RK ++ L++T + R++ +L E KRIT
Sbjct: 243 DLHEKMMK--FDPDRERARKELAALQLNRTADEVREEGILLEELKRIT 288
>sp|Q4PG15|SWC4_USTMA SWR1-complex protein 4 OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=SWC4 PE=3 SV=1
Length = 615
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 140/297 (47%), Gaps = 72/297 (24%)
Query: 15 PTTQEKKSRPQKEPQRKPDGISREVYALTGGLAPLM-----------PSIDVSQL----- 58
P++ SRP+ K DG++RE++AL G AP + P + + L
Sbjct: 44 PSSAASASRPKP----KYDGMTRELFALLGDNAPSLAMTHGLDAEGKPVMGLGGLFKPKF 99
Query: 59 KKRPPSDEKI-TWQWLPFTNSARKD------------NLQLYHWV--RVVNGVPPTG--- 100
K+R EK+ W+W PF NSAR D L L+HW R + G
Sbjct: 100 KRR---KEKVRQWRWTPFLNSARDDTQIDDDVPEINHGLILHHWAPARSFSTTAADGISA 156
Query: 101 -------DYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIA 153
Y +A +N + V Y+++EY ++L D WTKEETD L ELC +DLRF+VI
Sbjct: 157 EDADIDTKYQYAAFNTTSGVYSYSNDEYIQHLRDDDWTKEETDYLMELCTAYDLRFVVIH 216
Query: 154 DRFP--------------------SSRTVEELKDRYYGVSRAILIARAPSPTDVSGHPLV 193
DR+ R++E+LK RYY + R ++ +R S DV ++
Sbjct: 217 DRYDWAAAQASFLAGSTSAVPQPVKERSMEDLKVRYYAICRRLIRSRI-STDDVETRQML 275
Query: 194 KDPYNVSQ--EVERKRALSMVLSQTKHQERKDAEVLAEAKRITDSRMASRAAEEPEM 248
Y + EVERK+A++ + ++T Q ++ + E +RI + A A+E E+
Sbjct: 276 LSTYAFDKQREVERKKAVARLYTRTPEQLAEEEALYVEIRRI-EQNEAKYASEREEL 331
>sp|Q870Q1|SWC4_NEUCR SWR1-complex protein 4 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=swc-4
PE=3 SV=2
Length = 733
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 131/281 (46%), Gaps = 54/281 (19%)
Query: 2 DAKDILGIPKTQLPTTQEKKSRPQKEPQRKPDGISREVYALTGGLAPLMPSIDVSQLKKR 61
D +D+L +P KK+R P+ G++REV L GG P+ +VS KKR
Sbjct: 5 DVRDVLNLPSDHAGPRPSKKARTAT-PRPNLKGLAREVQNL-GGDNPIAIVPEVSIFKKR 62
Query: 62 PPSDEK--ITWQWLPFTNSARKDN--LQLYHWVRVVNGVPPTG----------------- 100
K W+ FTNSAR D+ L L HW R +G G
Sbjct: 63 RTVSRKPAAKWELKAFTNSARGDDGALVLRHWKRKPDGTVQDGSAEGQDSAATADNSADK 122
Query: 101 --DYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRF-- 156
D SFAK+N V V +Y++++Y L P WTKEETD L EL + FDLR+ +I DR+
Sbjct: 123 PEDSSFAKFNVRVSVPQYSEDQYNTNLKHPDWTKEETDYLLELAKDFDLRWPIIWDRYEY 182
Query: 157 ----------------PSS--RTVEELKDRYYGVSRAILIARAPS------PTDVSGHPL 192
P+S RT+E+LK RYY V+ ++ + P+ ++ L
Sbjct: 183 APQQPEGETPDGMAVVPASKPRTMEDLKARYYEVAAKMMAVQKPAQYMTRPEFELYEMML 242
Query: 193 VKDPYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRI 233
DP QE RKR L ++ + R++ +L E KRI
Sbjct: 243 HFDP---KQEQNRKRFAENTLKRSSDEAREEEALLLEIKRI 280
>sp|Q5B4T5|SWC4_EMENI SWR1-complex protein 4 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=swc4 PE=3
SV=1
Length = 586
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 140/282 (49%), Gaps = 63/282 (22%)
Query: 2 DAKDILGIPKTQLPTTQEKKSRPQKEPQRKPDGISREVYALTGGLAPLMPSIDVSQLKKR 61
D +D+L +P P +K QK +++P+GI+RE++AL G AP + +I+ ++ K R
Sbjct: 5 DVRDMLDLPAEGQPRPHKK----QKVVEKRPEGITRELFALLGERAPPI-AINENRYKGR 59
Query: 62 PPSDEKITWQWLPFTN-SARKDNLQLYHWVRV--VNGVPPTGD----------------- 101
P WQ AR D+L L HW R +P D
Sbjct: 60 P------KWQTKARVRPCARSDDLVLRHWQREPESTNIPAIEDTRAEGETKEQGEHKTAD 113
Query: 102 --YSFAKYNKSVDVV-KYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRF-- 156
Y FAKYN + +YT +EY ++L W++EETD L +L E +DLR++VIADR+
Sbjct: 114 REYPFAKYNIKLKFSNRYTTDEYNRHLRSEDWSREETDYLMDLVEEYDLRWVVIADRYDF 173
Query: 157 ----------------PSS--RTVEELKDRYYGVSRAILIARAPSPTDVS------GHPL 192
PS RT+E++K RYY V+ ++L P P+++S +
Sbjct: 174 QPQRVDNTEETSSALVPSKQFRTMEQMKARYYFVAASMLALEHP-PSEMSEAEFDLHERM 232
Query: 193 VKDPYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRIT 234
+K ++ +E RK ++ L++T + R++ +L E KRIT
Sbjct: 233 MK--FDPERERHRKELAALQLNRTADEVREETVLLEELKRIT 272
>sp|Q752S6|SWC4_ASHGO SWR1-complex protein 4 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=SWC4 PE=3 SV=1
Length = 488
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 136/253 (53%), Gaps = 33/253 (13%)
Query: 2 DAKDILGI-PKTQLPTTQEKKSRP--QKEPQRKPDGISREVYALTGGLAPLMPSIDVSQL 58
D D+L I PK+ P Q +S K P+ + G+ RE+Y L G P + S+
Sbjct: 5 DIFDVLNIQPKSSSPHPQTSQSNAGASKTPKPQVTGMQRELYNLLGDNTPPIVIQPTSKF 64
Query: 59 KKRPPSDEKITWQWLPFTNSARKDN--LQLYHWVR----VVNGVPPTGDYSFAKYNKSVD 112
K R S K + P+T++ + ++L HWV+ ++ G P SFAKY++ +
Sbjct: 65 KDRLASLTKPS----PWTHTEFEATPYVKLSHWVKGSKELLEGQSPKS--SFAKYDQKLT 118
Query: 113 VVKYTDEEYEKYLTD---------PMWTKEETDQLFELCERFDLRFIVIADRF--PSSRT 161
+ ++T+ EY++++ P W+ EE LF+LC R+DLR+ ++ DR+ SRT
Sbjct: 119 LPEFTEGEYQEFMAQAAKGANSDAPTWSYEEVQYLFDLCRRYDLRWHIVYDRYMYDESRT 178
Query: 162 VEELKDRYYGVSRAILIARAPSPTDVSGHPLVKD-PYNVSQEVERKRALSMVLSQTKHQE 220
+E++++ +Y V + A+ P G+PL+ Y+ QE++RK+ L+ +LS++ +
Sbjct: 179 MEDIREMFYTVCQKYFQAKDP------GNPLLPSLAYSKDQEIQRKKYLTRLLSRSAAEI 232
Query: 221 RKDAEVLAEAKRI 233
++ ++ E+++
Sbjct: 233 AEEEALIMESRKF 245
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 329 RVEQALQELGVNLKPKVPTKAVCAEHLELRKEILTLLNLQKQLQYKEAE 377
+V LQELG+ ++P +P+ AV H EL + I+TLL+L++Q EAE
Sbjct: 435 KVVSVLQELGLPVRPAMPSAAVVQHHDELLRRIVTLLDLKRQQDKLEAE 483
>sp|Q4HY90|SWC4_GIBZE SWR1-complex protein 4 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=SWC4 PE=3 SV=2
Length = 624
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 123/258 (47%), Gaps = 58/258 (22%)
Query: 2 DAKDILGIPKTQLPTTQEKKSRPQKEPQRKPD--GISREVYALTGGLAPLMPSIDVSQLK 59
D +D+L + T + S+ QK +P+ G++REV L GG P+ +V+ K
Sbjct: 5 DVRDVLNLGDG---TVGPRSSKKQKLAAPRPNLKGLAREVQNL-GGDNPIAIVPEVTHFK 60
Query: 60 KRPPSDEKIT--WQWLPFTNSARKD-NLQLYHWVR--------------VVNGVPPT--- 99
KR + K T W+ PF NSAR D N L HW R + G P
Sbjct: 61 KRRFTSRKPTAKWEMRPFKNSARSDSNFTLRHWRRKDEKQEGIDESQEQISQGDQPQPQK 120
Query: 100 ---GDYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRF 156
D +FAKYN V V +Y++ +Y++ L WTKEETD L EL + FDLR+ +I DR+
Sbjct: 121 NELEDSAFAKYNVQVSVPQYSEGQYQQSLQHVDWTKEETDYLLELAQDFDLRWPLIWDRY 180
Query: 157 ----PS--------------------SRTVEELKDRYYGVSRAILIARAP----SPTDVS 188
P+ SRT+E+LK RYY V+ ++ A+ P + + S
Sbjct: 181 EWNPPATNGEADDDGDESKAIVPATRSRTLEDLKARYYEVASKMMAAQKPVQYMTQPEFS 240
Query: 189 GHPLVKDPYNVSQEVERK 206
H L+ +N QE RK
Sbjct: 241 LHELMAH-FNPQQEKLRK 257
>sp|Q6C9M6|SWC4_YARLI SWR1-complex protein 4 OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=SWC4 PE=3 SV=1
Length = 504
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 85/166 (51%), Gaps = 14/166 (8%)
Query: 2 DAKDILGIPKTQLPT---TQEKKSRPQKEP--QRKPDGISREVYALTGGLAP---LMPSI 53
D +D+L +P + P TQ+ K + P ++ DG+ RE++AL G P +
Sbjct: 6 DVRDVLDLPDLE-PNDKLTQQPKRQKLAAPVGGKRMDGMQRELFALMGENTPSVSVTKDS 64
Query: 54 DVSQLKKRPPSDEKIT-WQWLPFTNSARKDNLQLYHWVRVVNGVPPTGD-YSFAKYNKSV 111
S K +P K+T W W PF N AR+D L L HWVR G GD Y FA N +
Sbjct: 65 HTSLFKDKPQWQAKLTPWMWTPFQNQAREDGLILSHWVR--GGELTQGDQYPFAALNTQI 122
Query: 112 DVVKYTDEEYEKY-LTDPMWTKEETDQLFELCERFDLRFIVIADRF 156
+ T E+Y+ L P WT EET L LC FDLR+ VI DR+
Sbjct: 123 SFPELTQEDYDGLKLATPGWTLEETRYLMHLCSEFDLRWPVIHDRW 168
>sp|Q6CSS3|SWC4_KLULA SWR1-complex protein 4 OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=SWC4 PE=3 SV=1
Length = 497
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 120/231 (51%), Gaps = 27/231 (11%)
Query: 2 DAKDILGI-PKTQLPTTQEKKSRPQ----KEPQRKPDGISREVYALTGGLAPLMPSIDVS 56
D D+L I PK+ P + + P K + + GI RE+Y+L G P +P +
Sbjct: 5 DIFDVLNIRPKSSSPDAEAQTPTPSSGTVKHNKPQVTGIQRELYSLLGDNTPTVPIKQGN 64
Query: 57 QLKKRPPSDEKIT-WQWLPFTNSARKDNLQLYHWVR-----VVNGVPPTGDYSFAKYNKS 110
+ K S+ K + W ++ F ++ +L+L HWV+ V V P+ SFAK+N+
Sbjct: 65 KFKDSLNSNIKPSPWSFVEFEANS---HLKLRHWVKGSKELVGATVEPS---SFAKFNQH 118
Query: 111 VDVVKYTDEEYEKYLT--DPMWTKEETDQLFELCERFDLRFIVIADRFP---SSRTVEEL 165
+ + + ++E+++++ + W E LF+LC +D+++ VIADRF + R +++L
Sbjct: 119 LTIPSFDEQEFQQFMNGNNSEWKYGEVQYLFDLCRNYDMKWFVIADRFNYNGTERKLDDL 178
Query: 166 KDRYYGVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQT 216
K+ +Y V + + + P +S K+ +E+ERK+ L +L +T
Sbjct: 179 KEMFYTVCQWYFLYKDPDNPLISQLNFPKE-----KELERKKYLERLLKRT 224
Score = 39.3 bits (90), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 329 RVEQALQELGVNLKPKVPTKAVCAEHLELRKEILTLLNLQKQLQYKEAE 377
++ LQELG+ ++P +P+ V EH +L K+I TLL L+KQ+ AE
Sbjct: 444 KIVATLQELGLPVRPAMPSLEVVQEHEKLLKKIATLLELKKQVDKLTAE 492
>sp|P53201|SWC4_YEAST SWR1-complex protein 4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SWC4 PE=1 SV=1
Length = 476
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 50/271 (18%)
Query: 2 DAKDILGIPKTQLPTTQEKKSRPQKEPQRKPD----GISREVYALTGGLAPLMPSIDVSQ 57
D D+L I + T + S P +P G+ RE++ L G P + +
Sbjct: 5 DIFDVLNIKQKSRSPTNGQVSVPSSSAANRPKPQVTGMQRELFNLLGENQPPVVIKSGNN 64
Query: 58 LKKRPPSDEKIT-WQWLPFTNSARKDNLQLYHWVR----VVNGVPPTGDYSFAKYNKSVD 112
K++ S K + W ++ F + +++ L HWV+ ++ P YS K+N+ +
Sbjct: 65 FKEKMLSTSKPSPWSFVEFKAN---NSVTLRHWVKGSKELIGDTPKESPYS--KFNQHLS 119
Query: 113 VVKYTDEEYEKYLTDP---------------------------MWTKEETDQLFELCERF 145
+ +T EEYE ++ + W+ EE + LF LC+++
Sbjct: 120 IPSFTKEEYEAFMNENEGTQKSVESEKNHNENFTNEKKDESKNSWSFEEIEYLFNLCKKY 179
Query: 146 DLRFIVIADRFP--SSRTVEELKDRYYGVSRAILIARAPSPTDVSGHPLVKD-PYNVSQE 202
DLR+ +I DR+ +SRT+E+LK+++Y R A PS +PL+ ++ +E
Sbjct: 180 DLRWFLIFDRYSYNNSRTLEDLKEKFYYTCRNYFKASDPS------NPLLSSLNFSAEKE 233
Query: 203 VERKRALSMVLSQTKHQERKDAEVLAEAKRI 233
+ERK+ L +LS++ + ++ ++ E+K+
Sbjct: 234 IERKKYLQRLLSRSAAEIAEEEALVVESKKF 264
>sp|Q6FTV1|SWC4_CANGA SWR1-complex protein 4 OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SWC4 PE=3
SV=1
Length = 532
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 76/280 (27%)
Query: 2 DAKDILGIPKTQLPTTQEKKSRPQKEPQRKPD--GISREVYALTG-GLAPLMPSIDVSQL 58
D D+L I + S P KP G+ RE+Y L G AP++ +++
Sbjct: 5 DIFDVLNIKQKSSSPNAASPSVPASGKSSKPQLTGMQRELYNLLGENEAPVVVQ-SMNRF 63
Query: 59 KKRPPSDEKIT-WQWLPFTNSARKDNLQLYHWV---RVVNGVPPTGDYSFAKYNKSVDVV 114
K++ S+ K T W N + L L HWV R + G P + F KY+ + +
Sbjct: 64 KEKLASNAKPTPWS---LANFKANEYLTLQHWVKGSRELIGEEPQ-ESEFKKYDVHLTIP 119
Query: 115 KYTDEEYEKYL-----------------------TDPMWTKEETDQ-------------- 137
++T++EY ++ TD T+E+T+
Sbjct: 120 EFTEDEYNSFIPTSNAEENEKQNIGEKVEANGDSTDVNMTEEDTNDKVKESVPQDENKST 179
Query: 138 -----------------LFELCERFDLRFIVIADRF---PSSRTVEELKDRYYGVSRAIL 177
LF+LC+++DLR+ VI DR+ S+RT+E+LK ++Y VS+
Sbjct: 180 SDNKKNNEKWEYNEVKYLFDLCKKYDLRWFVIQDRYDYENSNRTLEDLKSKFYEVSKCYF 239
Query: 178 IARAPSPTDVSGHPLVKD-PYNVSQEVERKRALSMVLSQT 216
A+ P P+++ Y+ +E +RK+ L +L+++
Sbjct: 240 KAKKPD------DPMLQSLNYSKDKETQRKKYLERLLARS 273
Score = 36.6 bits (83), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 321 SAGLRTIK-----RVEQALQELGVNLKPKVPTKAVCAEHLELRKEILTLLNLQKQLQYKE 375
SA + T K ++ QELG+ +P +PT V E+ L K+I TLL+++KQ+ E
Sbjct: 466 SAKITTFKPAIQNKIISTAQELGIPARPVMPTFEVVTEYEALLKKIATLLDIKKQIDKIE 525
Query: 376 A 376
A
Sbjct: 526 A 526
>sp|Q5AAJ7|SWC4_CANAL SWR1-complex protein 4 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=SWC4 PE=3 SV=1
Length = 635
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 8/111 (7%)
Query: 126 TDPMWTKEETDQLFELCERFDLRFIVIADRFPS-SRTVEELKDRYYGVSRAILIARAPSP 184
T+ WT +ET LFELC+ F+L++ +I DRFP+ +RT E+LK+++Y + IL +
Sbjct: 303 TESEWTYKETKHLFELCQAFELKWPIIHDRFPNPNRTAEDLKEQFYRICIKILENQKN-- 360
Query: 185 TDVSGHPLVKD--PYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRI 233
L+ Y +E+ERK+ L +L +T + ++ ++ EA+R
Sbjct: 361 ---KNQALIDSLKAYCKPRELERKQYLENLLKRTPAEIAEEESLVIEARRF 408
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 48/159 (30%)
Query: 1 MDAKDILGIPKTQLPTTQEKKSRPQKEPQRK------PDG-----ISREVYALTGGLAPL 49
M A DIL + L +++ ++P K+ Q+ PDG ++RE+Y L G P
Sbjct: 1 MSANDILDV----LNIQRDESNQPPKKKQKSSSTPTLPDGKQLTGMARELYNLVG---PN 53
Query: 50 MPSIDVS---------QLKKRPPSDEKITWQWLPFTNSARKDNLQLYHWVRVV------- 93
P I+++ ++KK PS W +PFT K ++L HWV+
Sbjct: 54 TPPINLNSNSYTANKEKMKKFKPS----PWTRMPFT---PKQGIELNHWVKGSKELIEQQ 106
Query: 94 ----NGVPPTGDYSFAKYNKSVDVVKYTDEE-YEKYLTD 127
+G P Y F KYN +++ ++ DE+ Y+ Y+ +
Sbjct: 107 EFEEDGTPKP--YFFEKYNVQLEIPEFVDEDTYDLYMIE 143
>sp|Q5NZG9|DXR_AROAE 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Aromatoleum
aromaticum (strain EbN1) GN=dxr PE=3 SV=1
Length = 403
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 110 SVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRY 169
++DV+ + +E + + + + ++LFELC RF RF V+ D S +L+ R
Sbjct: 25 TLDVLARHPDRFEAF---ALTAQIQVERLFELCLRFSPRFAVLVD----SAAASDLRQRL 77
Query: 170 YGVSRAILIARAPSP-TDVSGHP 191
A + P DV+ HP
Sbjct: 78 KAAGSATEVLAGPGALVDVAAHP 100
>sp|P53675|CLH2_HUMAN Clathrin heavy chain 2 OS=Homo sapiens GN=CLTCL1 PE=1 SV=2
Length = 1640
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 36 SREVYALTGGLAPLMPSIDV-SQLKKRPPSDEKITWQWLPFTNSARKDNLQLYHWVRVVN 94
+ +V AL G + +I++ S++K ++E I W+W+ A +YHW +
Sbjct: 76 ASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWVSVNTVALVTETAVYHWSMEGD 135
Query: 95 GVPPTGDYSFAKYNKSV--DVVKYTDEEYEKYL 125
P F ++ V V+ Y +EY+K+L
Sbjct: 136 SQPMK---MFDRHTSLVGCQVIHYRTDEYQKWL 165
>sp|Q6CNI5|SHE1_KLULA Mitotic spindle-associated protein SHE1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=SHE1 PE=3 SV=1
Length = 331
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 10/122 (8%)
Query: 312 EQMVQAASSSAGLRTIKRVEQALQELGVNLKPKVPTKAVCAEHLELRKEILTLLNL---- 367
QM++ S R V Q L++ NL P V + HL E+ +++
Sbjct: 13 HQMIEYIGVSK--RLGNNVLQELEQRASNLLPNVSPEKTRLMHLGHDSEMKNSISMKFQD 70
Query: 368 --QKQLQYKEAEGSSYRDGSYIDMPGTPKRSQRAGDQDRTFVPESINFGGERVGKRDQKR 425
+K+ Q ++ + Y Y MP TP + + D D T V ++N G K+ QK
Sbjct: 71 KHEKRFQVMDSIDTHYSLAKYSGMPQTPGKRKNGSDADETSV--AVNLGSPGSVKKKQKS 128
Query: 426 KG 427
G
Sbjct: 129 VG 130
>sp|B2UR37|RHO_AKKM8 Transcription termination factor Rho OS=Akkermansia muciniphila
(strain ATCC BAA-835) GN=rho PE=3 SV=1
Length = 474
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 47 APLMPSIDVSQLKKRPPSDEKITWQWLPFTNSARKDNLQL 86
AP++ ID+++L+KRP +D + + LP N+A QL
Sbjct: 54 APVLEQIDINELRKRPLNDLQEMAEGLPIRNAASLTKSQL 93
>sp|O58035|SYA_PYRHO Alanine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=alaS PE=1
SV=1
Length = 915
Score = 32.0 bits (71), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Query: 65 DEKITWQWLPFTNSARKDNLQLYHWVRVVNGVPP 98
D K+TW+WLP T + +K +LY GV P
Sbjct: 672 DRKVTWEWLPRTTAEQKYGFRLYQ-----GGVVP 700
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,048,919
Number of Sequences: 539616
Number of extensions: 7227936
Number of successful extensions: 17549
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 17446
Number of HSP's gapped (non-prelim): 76
length of query: 450
length of database: 191,569,459
effective HSP length: 121
effective length of query: 329
effective length of database: 126,275,923
effective search space: 41544778667
effective search space used: 41544778667
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)