Query 013060
Match_columns 450
No_of_seqs 339 out of 2485
Neff 6.6
Searched_HMMs 46136
Date Thu Mar 28 23:59:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013060.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013060hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07418 MPP_PP7 PP7, metalloph 100.0 2.3E-81 4.9E-86 637.7 36.5 377 50-430 1-377 (377)
2 KOG0372 Serine/threonine speci 100.0 8.8E-77 1.9E-81 558.0 18.4 276 82-423 14-289 (303)
3 cd07420 MPP_RdgC Drosophila me 100.0 9.7E-72 2.1E-76 559.1 31.0 300 56-417 2-321 (321)
4 cd07417 MPP_PP5_C PP5, C-termi 100.0 2.3E-69 5.1E-74 542.4 28.6 309 46-428 4-312 (316)
5 KOG0373 Serine/threonine speci 100.0 3.3E-69 7.2E-74 499.7 19.3 282 81-427 16-297 (306)
6 cd07416 MPP_PP2B PP2B, metallo 100.0 1.4E-66 3E-71 520.9 28.8 280 83-427 15-304 (305)
7 KOG0374 Serine/threonine speci 100.0 5.9E-67 1.3E-71 525.6 24.9 271 82-418 30-302 (331)
8 PTZ00239 serine/threonine prot 100.0 2.8E-66 6E-71 517.1 28.9 274 83-421 15-288 (303)
9 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 2.4E-66 5.3E-71 514.3 27.9 271 83-419 14-284 (285)
10 PTZ00480 serine/threonine-prot 100.0 8.3E-66 1.8E-70 515.6 28.4 279 82-430 30-309 (320)
11 PTZ00244 serine/threonine-prot 100.0 7.1E-65 1.5E-69 505.3 27.9 270 82-418 23-293 (294)
12 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 1.5E-64 3.3E-69 503.3 26.6 269 82-417 21-290 (293)
13 smart00156 PP2Ac Protein phosp 100.0 3.9E-64 8.4E-69 496.1 26.7 268 84-418 1-269 (271)
14 KOG0375 Serine-threonine phosp 100.0 4.5E-64 9.7E-69 492.2 16.0 283 83-427 60-349 (517)
15 cd07419 MPP_Bsu1_C Arabidopsis 100.0 3E-62 6.5E-67 491.2 27.8 279 78-417 15-310 (311)
16 KOG0377 Protein serine/threoni 100.0 3.4E-62 7.4E-67 488.5 13.9 323 44-433 108-445 (631)
17 KOG0371 Serine/threonine prote 100.0 1.9E-61 4.1E-66 457.1 14.7 282 58-419 21-302 (319)
18 KOG0376 Serine-threonine phosp 100.0 2.9E-56 6.3E-61 455.4 15.7 305 53-428 162-466 (476)
19 cd00144 MPP_PPP_family phospho 100.0 4.1E-32 9E-37 259.1 19.8 217 119-402 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 99.9 7E-26 1.5E-30 220.9 16.4 125 116-242 1-145 (245)
21 cd07423 MPP_PrpE Bacillus subt 99.9 6.6E-25 1.4E-29 212.4 14.4 124 116-242 1-142 (234)
22 cd07413 MPP_PA3087 Pseudomonas 99.9 1.1E-24 2.4E-29 209.5 15.1 118 119-240 2-143 (222)
23 PRK11439 pphA serine/threonine 99.9 1.3E-23 2.8E-28 201.5 14.7 127 107-240 9-146 (218)
24 PRK00166 apaH diadenosine tetr 99.9 3.7E-24 8.1E-29 211.8 11.1 122 116-243 1-127 (275)
25 cd07421 MPP_Rhilphs Rhilph pho 99.9 5.1E-23 1.1E-27 203.1 15.0 75 117-191 3-83 (304)
26 cd07422 MPP_ApaH Escherichia c 99.9 1.6E-23 3.5E-28 205.3 10.3 120 118-243 1-125 (257)
27 cd07425 MPP_Shelphs Shewanella 99.9 9.4E-23 2E-27 194.3 13.2 122 119-241 1-139 (208)
28 cd07424 MPP_PrpA_PrpB PrpA and 99.9 1.7E-22 3.7E-27 191.9 14.9 120 116-241 1-131 (207)
29 TIGR00668 apaH bis(5'-nucleosy 99.9 3.7E-22 8.1E-27 196.6 11.9 121 116-243 1-127 (279)
30 PHA02239 putative protein phos 99.9 9.7E-22 2.1E-26 190.6 11.7 125 116-242 1-168 (235)
31 PRK09968 serine/threonine-spec 99.9 1.9E-21 4.1E-26 186.6 13.2 128 106-240 6-144 (218)
32 KOG0376 Serine-threonine phosp 99.6 1.7E-17 3.7E-22 171.0 -3.5 343 76-437 7-351 (476)
33 PF00149 Metallophos: Calcineu 99.3 2E-11 4.4E-16 106.5 9.0 77 116-192 1-82 (200)
34 PRK09453 phosphodiesterase; Pr 99.0 6.7E-10 1.5E-14 103.3 9.0 69 116-189 1-77 (182)
35 cd00841 MPP_YfcE Escherichia c 98.9 7.2E-09 1.6E-13 93.3 8.3 59 117-188 1-59 (155)
36 TIGR00040 yfcE phosphoesterase 98.7 2.3E-08 5E-13 90.7 7.7 64 116-188 1-64 (158)
37 cd07388 MPP_Tt1561 Thermus the 98.7 2.6E-07 5.6E-12 89.3 15.3 71 116-188 5-75 (224)
38 cd07379 MPP_239FB Homo sapiens 98.7 4E-07 8.8E-12 80.4 12.6 61 117-188 1-63 (135)
39 cd07397 MPP_DevT Myxococcus xa 98.6 1.4E-07 2.9E-12 91.8 9.5 111 117-240 2-158 (238)
40 PF12850 Metallophos_2: Calcin 98.6 6E-08 1.3E-12 86.5 6.5 61 116-189 1-61 (156)
41 COG0639 ApaH Diadenosine tetra 98.5 2.1E-07 4.5E-12 81.2 7.5 146 190-385 3-154 (155)
42 cd07392 MPP_PAE1087 Pyrobaculu 98.5 5.4E-06 1.2E-10 76.2 15.1 64 118-188 1-65 (188)
43 cd00838 MPP_superfamily metall 98.2 3E-06 6.5E-11 71.8 7.4 67 119-186 1-69 (131)
44 cd07394 MPP_Vps29 Homo sapiens 98.2 3.7E-06 8.1E-11 78.4 7.4 59 117-188 1-65 (178)
45 COG0622 Predicted phosphoester 98.2 6.2E-05 1.4E-09 69.9 15.0 65 116-189 2-66 (172)
46 PRK05340 UDP-2,3-diacylglucosa 98.1 7.8E-06 1.7E-10 79.5 8.1 70 116-188 1-83 (241)
47 cd07403 MPP_TTHA0053 Thermus t 98.1 2.6E-05 5.6E-10 68.8 9.9 56 119-186 1-56 (129)
48 PRK11340 phosphodiesterase Yae 98.0 1.7E-05 3.6E-10 78.7 8.7 72 114-188 48-125 (271)
49 cd07385 MPP_YkuE_C Bacillus su 98.0 1E-05 2.2E-10 76.9 6.3 71 116-189 2-77 (223)
50 cd07404 MPP_MS158 Microscilla 98.0 5.9E-06 1.3E-10 75.3 4.1 67 118-188 1-68 (166)
51 cd07400 MPP_YydB Bacillus subt 97.9 9.3E-05 2E-09 65.5 10.4 68 118-187 1-80 (144)
52 cd07391 MPP_PF1019 Pyrococcus 97.8 6.8E-05 1.5E-09 69.2 7.1 56 132-188 31-88 (172)
53 TIGR03729 acc_ester putative p 97.7 7.3E-05 1.6E-09 72.5 6.8 68 117-188 1-74 (239)
54 TIGR01854 lipid_A_lpxH UDP-2,3 97.7 0.00011 2.3E-09 71.1 7.8 68 118-188 1-81 (231)
55 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.6 0.00011 2.4E-09 72.7 7.1 69 118-188 1-86 (262)
56 cd07399 MPP_YvnB Bacillus subt 97.6 0.0024 5.2E-08 61.1 15.9 69 117-187 2-81 (214)
57 TIGR00619 sbcd exonuclease Sbc 97.6 0.00013 2.8E-09 71.7 7.2 72 116-188 1-88 (253)
58 cd07396 MPP_Nbla03831 Homo sap 97.6 0.00018 3.9E-09 71.0 7.7 73 117-190 2-88 (267)
59 cd07390 MPP_AQ1575 Aquifex aeo 97.5 0.00025 5.5E-09 65.1 7.3 41 145-190 44-84 (168)
60 PHA02546 47 endonuclease subun 97.5 0.0002 4.3E-09 73.5 6.9 73 116-189 1-90 (340)
61 cd07398 MPP_YbbF-LpxH Escheric 97.4 0.00034 7.4E-09 66.1 6.5 68 119-188 1-82 (217)
62 PRK11148 cyclic 3',5'-adenosin 97.4 0.00061 1.3E-08 67.5 8.3 73 114-188 13-98 (275)
63 PRK04036 DNA polymerase II sma 97.4 0.00073 1.6E-08 72.9 9.5 116 114-239 242-388 (504)
64 COG2129 Predicted phosphoester 97.3 0.0071 1.5E-07 58.2 14.7 179 115-346 3-184 (226)
65 cd07402 MPP_GpdQ Enterobacter 97.3 0.00058 1.3E-08 65.6 7.6 67 117-188 1-83 (240)
66 PRK10966 exonuclease subunit S 97.3 0.00061 1.3E-08 71.6 7.2 72 116-189 1-88 (407)
67 cd00840 MPP_Mre11_N Mre11 nucl 97.2 0.00066 1.4E-08 64.1 6.3 73 117-190 1-91 (223)
68 cd07383 MPP_Dcr2 Saccharomyces 97.1 0.0017 3.6E-08 61.1 7.7 70 116-186 3-87 (199)
69 PF08321 PPP5: PPP5 TPR repeat 97.1 0.0013 2.7E-08 55.4 5.9 47 53-109 49-95 (95)
70 TIGR00583 mre11 DNA repair pro 97.1 0.0016 3.4E-08 68.4 8.0 75 114-189 2-124 (405)
71 cd08165 MPP_MPPE1 human MPPE1 97.0 0.00091 2E-08 61.0 4.8 44 146-189 41-90 (156)
72 TIGR00024 SbcD_rel_arch putati 96.9 0.0024 5.2E-08 61.9 7.1 68 117-189 16-103 (225)
73 cd08163 MPP_Cdc1 Saccharomyces 96.9 0.067 1.4E-06 52.9 17.3 23 324-346 203-225 (257)
74 cd07393 MPP_DR1119 Deinococcus 96.8 0.0026 5.6E-08 61.6 6.5 66 118-188 1-84 (232)
75 cd07401 MPP_TMEM62_N Homo sapi 96.6 0.0062 1.3E-07 59.9 7.9 71 118-189 2-90 (256)
76 COG1409 Icc Predicted phosphoh 96.6 0.0062 1.3E-07 59.5 7.9 73 116-190 1-80 (301)
77 cd07395 MPP_CSTP1 Homo sapiens 96.5 0.0079 1.7E-07 58.9 7.8 73 116-188 5-99 (262)
78 COG2908 Uncharacterized protei 96.5 0.0091 2E-07 57.9 7.7 100 120-241 2-117 (237)
79 cd00839 MPP_PAPs purple acid p 96.4 0.0032 7E-08 62.4 4.6 70 116-190 5-83 (294)
80 cd00845 MPP_UshA_N_like Escher 96.4 0.0054 1.2E-07 59.6 5.8 67 117-188 2-82 (252)
81 COG4186 Predicted phosphoester 96.4 0.017 3.6E-07 52.7 8.3 69 117-189 5-87 (186)
82 COG0420 SbcD DNA repair exonuc 96.3 0.0076 1.6E-07 62.8 6.7 74 116-190 1-90 (390)
83 COG1408 Predicted phosphohydro 96.2 0.01 2.2E-07 59.6 6.7 74 114-190 43-120 (284)
84 cd07380 MPP_CWF19_N Schizosacc 96.2 0.01 2.3E-07 53.9 6.2 67 119-186 1-68 (150)
85 cd07386 MPP_DNA_pol_II_small_a 96.1 0.018 4E-07 55.9 7.6 69 119-189 2-95 (243)
86 cd07384 MPP_Cdc1_like Saccharo 95.9 0.015 3.2E-07 53.9 5.6 44 146-189 48-101 (171)
87 cd08166 MPP_Cdc1_like_1 unchar 95.8 0.014 3E-07 55.4 5.2 43 146-188 45-93 (195)
88 KOG3662 Cell division control 95.7 0.033 7.2E-07 58.2 7.6 82 114-202 47-151 (410)
89 PF14582 Metallophos_3: Metall 95.4 0.032 6.8E-07 54.0 5.8 73 116-189 6-103 (255)
90 COG1407 Predicted ICC-like pho 95.3 0.032 6.9E-07 54.3 5.6 71 116-190 20-112 (235)
91 cd08164 MPP_Ted1 Saccharomyces 95.3 0.034 7.3E-07 52.7 5.6 66 123-188 24-111 (193)
92 cd07410 MPP_CpdB_N Escherichia 94.8 0.039 8.5E-07 54.6 4.9 66 117-187 2-94 (277)
93 PLN02533 probable purple acid 94.5 0.052 1.1E-06 57.5 5.2 70 116-189 140-212 (427)
94 KOG2863 RNA lariat debranching 93.8 0.12 2.6E-06 53.0 5.9 72 116-188 1-88 (456)
95 cd07412 MPP_YhcR_N Bacillus su 93.8 0.07 1.5E-06 53.4 4.3 67 117-188 2-88 (288)
96 cd07411 MPP_SoxB_N Thermus the 93.2 0.17 3.6E-06 49.9 5.9 66 117-188 2-95 (264)
97 cd07378 MPP_ACP5 Homo sapiens 93.2 0.18 3.9E-06 49.5 6.1 70 117-188 2-83 (277)
98 cd07408 MPP_SA0022_N Staphyloc 93.0 0.18 3.9E-06 49.4 5.8 66 117-188 2-82 (257)
99 COG1311 HYS2 Archaeal DNA poly 92.3 4.5 9.7E-05 43.3 15.1 77 114-190 224-323 (481)
100 TIGR00282 metallophosphoestera 91.8 0.32 6.9E-06 48.4 5.7 68 116-188 1-71 (266)
101 cd07409 MPP_CD73_N CD73 ecto-5 91.6 0.39 8.5E-06 47.8 6.2 67 117-188 2-94 (281)
102 KOG0918 Selenium-binding prote 90.9 0.023 5.1E-07 58.6 -3.3 95 143-243 47-142 (476)
103 cd07387 MPP_PolD2_C PolD2 (DNA 90.3 20 0.00044 35.5 17.9 47 146-192 45-111 (257)
104 COG1768 Predicted phosphohydro 89.9 0.6 1.3E-05 43.8 5.2 45 142-190 42-88 (230)
105 PF06874 FBPase_2: Firmicute f 89.3 0.42 9E-06 52.4 4.3 41 146-191 187-227 (640)
106 PRK09419 bifunctional 2',3'-cy 88.5 0.61 1.3E-05 55.6 5.4 67 116-187 661-735 (1163)
107 cd07406 MPP_CG11883_N Drosophi 88.4 0.87 1.9E-05 44.7 5.6 66 117-187 2-82 (257)
108 KOG1432 Predicted DNA repair e 87.8 1.8 3.9E-05 44.4 7.4 44 145-189 102-148 (379)
109 cd00842 MPP_ASMase acid sphing 86.0 1.4 3E-05 43.9 5.6 62 129-191 53-125 (296)
110 cd07405 MPP_UshA_N Escherichia 84.6 1.1 2.5E-05 44.7 4.2 67 117-188 2-87 (285)
111 cd07407 MPP_YHR202W_N Saccharo 83.2 1.5 3.2E-05 44.0 4.3 67 117-188 7-97 (282)
112 cd07382 MPP_DR1281 Deinococcus 82.9 2.7 5.8E-05 41.6 5.9 67 117-188 1-70 (255)
113 cd08162 MPP_PhoA_N Synechococc 81.3 2.5 5.3E-05 43.0 5.2 66 117-187 2-90 (313)
114 KOG2476 Uncharacterized conser 80.0 3.8 8.2E-05 43.5 6.0 69 116-185 6-75 (528)
115 PRK09420 cpdB bifunctional 2', 79.3 2.8 6.2E-05 46.9 5.3 67 117-188 27-122 (649)
116 TIGR01390 CycNucDiestase 2',3' 77.6 3.3 7.1E-05 46.2 5.1 67 117-188 4-99 (626)
117 COG0737 UshA 5'-nucleotidase/2 76.2 3.6 7.7E-05 44.6 4.8 67 117-188 28-115 (517)
118 PF04042 DNA_pol_E_B: DNA poly 74.4 5.1 0.00011 37.6 4.9 72 118-190 1-93 (209)
119 COG3855 Fbp Uncharacterized pr 74.1 2.4 5.2E-05 45.0 2.7 41 146-191 193-233 (648)
120 PRK09419 bifunctional 2',3'-cy 73.8 4.1 8.8E-05 48.7 4.9 66 117-187 43-138 (1163)
121 TIGR01530 nadN NAD pyrophospha 73.3 6.4 0.00014 43.2 5.9 67 117-188 2-94 (550)
122 PRK11907 bifunctional 2',3'-cy 72.9 5.1 0.00011 46.0 5.2 67 117-188 117-213 (814)
123 PRK09558 ushA bifunctional UDP 68.6 5.4 0.00012 43.6 4.1 67 117-188 36-121 (551)
124 KOG3325 Membrane coat complex 68.0 9.6 0.00021 34.8 4.8 63 117-188 2-66 (183)
125 KOG3947 Phosphoesterases [Gene 62.3 12 0.00026 37.5 4.7 69 113-190 59-128 (305)
126 PRK09418 bifunctional 2',3'-cy 60.7 13 0.00027 42.7 5.2 66 117-187 41-141 (780)
127 PTZ00422 glideosome-associated 59.6 15 0.00034 38.6 5.2 72 117-188 28-109 (394)
128 PTZ00235 DNA polymerase epsilo 56.6 35 0.00075 34.5 6.9 77 113-189 25-123 (291)
129 KOG1378 Purple acid phosphatas 51.2 18 0.0004 38.6 4.2 19 328-346 323-341 (452)
130 KOG3339 Predicted glycosyltran 45.1 55 0.0012 31.1 5.8 87 145-239 40-143 (211)
131 KOG2310 DNA repair exonuclease 44.1 58 0.0013 35.7 6.5 56 114-170 12-79 (646)
132 PF13258 DUF4049: Domain of un 37.3 1.7E+02 0.0038 28.8 8.0 56 175-241 127-186 (318)
133 PF02875 Mur_ligase_C: Mur lig 34.9 65 0.0014 25.9 4.3 69 117-185 13-82 (91)
134 PF06874 FBPase_2: Firmicute f 31.3 35 0.00077 37.9 2.6 43 325-379 507-553 (640)
135 PF09949 DUF2183: Uncharacteri 25.3 2.2E+02 0.0048 24.0 5.9 43 129-181 53-95 (100)
136 KOG2679 Purple (tartrate-resis 23.7 1E+02 0.0022 31.2 4.0 70 115-188 43-126 (336)
137 TIGR00282 metallophosphoestera 21.4 1E+02 0.0022 30.8 3.5 39 146-188 2-41 (266)
No 1
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=2.3e-81 Score=637.69 Aligned_cols=377 Identities=73% Similarity=1.280 Sum_probs=333.6
Q ss_pred CCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHH
Q 013060 50 YPEDGMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLH 129 (450)
Q Consensus 50 ~p~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~ 129 (450)
||+.+.+|.+||+.|++.|++..+++.+.++...++.+++.+||.+|+++|++||++++|+. +...+++|||||||++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~-~~~~~i~VvGDIHG~~~ 79 (377)
T cd07418 1 WPDGGALTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDV-EDVCEVVVVGDVHGQLH 79 (377)
T ss_pred CCCCCccCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecC-CCCCCEEEEEecCCCHH
Confidence 88889999999999999999999999999999999999999999999999999999999984 33459999999999999
Q ss_pred HHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcch
Q 013060 130 DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGK 209 (450)
Q Consensus 130 dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~ 209 (450)
+|+++|+..|+++.++.|||||||||||++|+||+.+|++||+.+|.+|++||||||.+.++..|||..|+..+|+..+.
T Consensus 80 dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~ 159 (377)
T cd07418 80 DVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGK 159 (377)
T ss_pred HHHHHHHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHH
Confidence 99999999999887777999999999999999999999999999999999999999999999999999999999987667
Q ss_pred hhhhhhhhhhcCCCceeeecCcEEeeccCCCCccCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCC
Q 013060 210 HAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWN 289 (450)
Q Consensus 210 ~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~~~~~ 289 (450)
.+|+.+.++|++||+++++++++|||||||++..++.......++.......+.......+.++++|++++|+..+++..
T Consensus 160 ~l~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~ 239 (377)
T cd07418 160 HVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGE 239 (377)
T ss_pred HHHHHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCC
Confidence 89999999999999999999999999999987653322211111111111111122234678999999999987666544
Q ss_pred CCCCCCCcCCcccccCCCCcCCCCccCCCCCeeeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeecc
Q 013060 290 PQLSSNLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHD 369 (450)
Q Consensus 290 ~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~ 369 (450)
+.+.+++|+|||||....|+.+|++||.|+.||++++++||++|++++||||||++++++.|.++..+++||++.|+
T Consensus 240 ---~~~~i~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~ 316 (377)
T cd07418 240 ---GSNLIPGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHD 316 (377)
T ss_pred ---CccccceeeEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEecc
Confidence 44456899999999998999998889999999999999999999999999999999999999999999999999885
Q ss_pred CCCCeEEEEecCCCCCCcccccccCCCcEEEEEEeCCCCCCCceEEEEecCCCCCCCcccc
Q 013060 370 VESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNPFYD 430 (450)
Q Consensus 370 ~~~gkliTvFSap~Y~~~~~~~~~~~N~gA~l~i~~~~~~~~~~~~f~~~~~~~~~~~~~~ 430 (450)
..+|+|+|||||||||++++|.+.++|+||+++|+.+++.+|+|++|++++|||+..|||+
T Consensus 317 ~~~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (377)
T cd07418 317 VESGKLITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVKPRPKANPYYD 377 (377)
T ss_pred CCCCcEEEEecCCccccccccccccCcceEEEEEecCCCCCccceEeeccCCCCCCCcCCC
Confidence 5679999999999999888887889999999999988888999999999999999999996
No 2
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-77 Score=558.01 Aligned_cols=276 Identities=39% Similarity=0.612 Sum_probs=257.3
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChH
Q 013060 82 SVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL 161 (450)
Q Consensus 82 ~~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~ 161 (450)
..+++.+|..||.+++++|.+|+|++.+++ |++|||||||||+||+.+|+..|-++.++ |+|||||||||.+|+
T Consensus 14 ~li~E~eV~~LC~~~~eiL~~E~NV~~i~t-----PvtvcGDIHGQf~Dllelf~igG~~~~t~-YLFLGDyVDRG~~Sv 87 (303)
T KOG0372|consen 14 ELIAESEVKALCAKVREILVEESNVQRIDT-----PVTVCGDIHGQFYDLLELFRIGGDVPETN-YLFLGDYVDRGYYSV 87 (303)
T ss_pred CCCcHHHHHHHHHHHHHHHhcCCCceecCC-----CcEEeecccchHHHHHHHHHhCCCCCCCc-eEeecchhccccchH
Confidence 467899999999999999999999999998 99999999999999999999999888777 999999999999999
Q ss_pred HHHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcchhhhhhhhhhhcCCCceeeecCcEEeeccCCCC
Q 013060 162 ETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFR 241 (450)
Q Consensus 162 evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~~ 241 (450)
|++.+|++||++||++|++||||||++.+++.|||++||.+|||. ..+|+.+.+.|+.||++|+|+++|||||||++|
T Consensus 88 Et~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~--~~vWr~c~eiFdyL~l~aiid~kifCVHGGlSP 165 (303)
T KOG0372|consen 88 ETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS--ANVWRYCTEIFDYLSLAAIIDGKIFCVHGGLSP 165 (303)
T ss_pred HHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCC--hHHHHHHHHHHHhhhHhheecCcEEEEcCCCCc
Confidence 999999999999999999999999999999999999999999995 499999999999999999999999999999999
Q ss_pred ccCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCCCcCCCCccCCCCCe
Q 013060 242 SVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGLSENTERGIG 321 (450)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g 321 (450)
++ .++|+|+.++|...- +....++|+|||||.+.+||..+ +||+|
T Consensus 166 ~i---------------------------~~lDqIr~lDR~~Ei-------ph~g~m~DllWSDPee~~g~~~S-PRGaG 210 (303)
T KOG0372|consen 166 SI---------------------------QTLDQIRVLDRKQEV-------PHDGAMCDLLWSDPEEGPGWGLS-PRGAG 210 (303)
T ss_pred ch---------------------------hhHHHHHHhhccccC-------CCCCcchheeccCcccCCCcccC-CCCcc
Confidence 65 789999999998643 23346999999999999999986 89999
Q ss_pred eeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEecCCCCCCcccccccCCCcEEEE
Q 013060 322 LLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYI 401 (450)
Q Consensus 322 ~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~gkliTvFSap~Y~~~~~~~~~~~N~gA~l 401 (450)
++||+++++.||+.||+++|+|+||- +.+||++.+ +++|+||||||||| ++.+|.||+|
T Consensus 211 ylFG~dvv~~F~~~N~~~~I~RaHQL------------v~eGyk~~F---~~~v~TVWSAPNYC------YrCGN~AsIl 269 (303)
T KOG0372|consen 211 YLFGEDVVESFLEANGLSLICRAHQL------------VMEGYKWHF---DEKVVTVWSAPNYC------YRCGNVAAIL 269 (303)
T ss_pred ccccHHHHHHHHHhCChHHHHHHHHH------------HHhhHHHhc---CCceEEEecCCchh------hhcCChHHhe
Confidence 99999999999999999999999994 789999966 59999999999999 8999999999
Q ss_pred EEeCCCCCCCceEEEEecCCCC
Q 013060 402 VLKPPKFDIPDFNVFEAVTPRP 423 (450)
Q Consensus 402 ~i~~~~~~~~~~~~f~~~~~~~ 423 (450)
-|+++ ....|..|++.+.+.
T Consensus 270 ~lde~--~~~~F~vFeaa~~~~ 289 (303)
T KOG0372|consen 270 ELDED--LDKDFRVFEAAPQES 289 (303)
T ss_pred eeccc--cCcceEeeecchhhh
Confidence 99876 577999999986433
No 3
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=9.7e-72 Score=559.07 Aligned_cols=300 Identities=37% Similarity=0.604 Sum_probs=264.7
Q ss_pred CCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHHHHH
Q 013060 56 LTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLL 135 (450)
Q Consensus 56 ~~~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~~il 135 (450)
||.+.++.+++.+... ..++++++.+||++|+++|++||++++|+. +..++++||||||||+.+|+++|
T Consensus 2 ~~~~~~~~~i~~~~~~----------~~l~~~~i~~L~~~a~~il~~ep~vl~i~~-~~~~~~~vvGDiHG~~~dL~~il 70 (321)
T cd07420 2 LTKDHIDALIEAFKEK----------QLLHAKYVLLILREARKVLKQLPNISRVST-SISKQVTICGDLHGKLDDLFLIF 70 (321)
T ss_pred CCHHHHHHHHHHHHcc----------CCCCHHHHHHHHHHHHHHHHhCCCEEEecC-CCCCCeEEEEeCCCCHHHHHHHH
Confidence 8999999999887642 257899999999999999999999999986 55669999999999999999999
Q ss_pred HhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcchhhhhhh
Q 013060 136 RDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKC 215 (450)
Q Consensus 136 ~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~ 215 (450)
+..|+++.+++|||||||||||++|+||+.+|++||+++|++|++||||||.+.++..|||.+||..+|+..+..+|+.+
T Consensus 71 ~~~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~ 150 (321)
T cd07420 71 YKNGLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLL 150 (321)
T ss_pred HHcCCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHH
Confidence 99999877667999999999999999999999999999999999999999999999999999999999987667899999
Q ss_pred hhhhcCCCceeeecCcEEeeccCCCCccCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccC----CCCCCC-
Q 013060 216 LGCFEGLPLASLIGKHVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVL----DPPWNP- 290 (450)
Q Consensus 216 ~~~f~~LPlaaii~~~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~----~~~~~~- 290 (450)
.++|++||+||+|++++|||||||++. .++++|.++.|+.. .|+...
T Consensus 151 ~~~F~~LPlaaii~~~i~cvHGGi~~~----------------------------~~l~~i~~i~r~~~~~~~~~p~~~~ 202 (321)
T cd07420 151 EDVFSWLPLATIIDNKILVVHGGISDS----------------------------TDLDLLDKIDRHKYVSVLRPPLRKG 202 (321)
T ss_pred HHHHHhCCceEEEcCCEEEEeCCCCCc----------------------------cCHHHHHhhhccccccccCCCcccc
Confidence 999999999999999999999999862 37888888888531 122100
Q ss_pred ---------------CCCCCCcCCcccccCCCCcCCCCccCCCCCeeeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCC
Q 013060 291 ---------------QLSSNLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRP 355 (450)
Q Consensus 291 ---------------~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~ 355 (450)
......++.|+|||||....++..+++||.|+.||++++++||++|++++||||||+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~-------- 274 (321)
T cd07420 203 MEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHEC-------- 274 (321)
T ss_pred ccccccccccccccccccccchhheeeecCCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChh--------
Confidence 000113678999999998888777888999999999999999999999999999997
Q ss_pred CCccccCCceeeccCCCCeEEEEecCCCCCCcccccccCCCcEEEEEEeCCCCCCCceEEEE
Q 013060 356 DLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFE 417 (450)
Q Consensus 356 ~~~~v~~Gy~~~~~~~~gkliTvFSap~Y~~~~~~~~~~~N~gA~l~i~~~~~~~~~~~~f~ 417 (450)
+++||++.| +|+|+||||||||| +.++|+||+|+|++. .+++|++|+
T Consensus 275 ----v~~G~~~~~---~~~~iTvFSa~nY~------~~~~N~gavl~i~~~--~~~~f~~~~ 321 (321)
T cd07420 275 ----KPEGYEFCH---NNKVITIFSASNYY------EEGSNRGAYIKLGPD--LTPHFVQYQ 321 (321)
T ss_pred ----hhcceEEec---CCeEEEEecCCccC------CCCCccEEEEEECCC--CceeEEEeC
Confidence 679999876 59999999999999 567899999999874 578898884
No 4
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=2.3e-69 Score=542.37 Aligned_cols=309 Identities=38% Similarity=0.662 Sum_probs=277.0
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCC
Q 013060 46 IPISYPEDGMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVH 125 (450)
Q Consensus 46 ~~~~~p~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIH 125 (450)
|.++|| +||.++++.+++.+... ..++.+++.+||++|+++|++||++++++. +...+++||||||
T Consensus 4 ~~~~~~---~i~~~~~~~~~~~~~~~----------~~l~~~~~~~l~~~~~~il~~ep~l~~i~~-p~~~~~~VvGDIH 69 (316)
T cd07417 4 PRLEDE---KVTLEFVKEMIEWFKDQ----------KKLHKKYAYQILLQVKELLKKLPSLVEITI-PEGEKITVCGDTH 69 (316)
T ss_pred cccCCC---CCCHHHHHHHHHHHHcc----------CCCCHHHHHHHHHHHHHHHHhCCcceeccC-CCCceeEEeeccc
Confidence 568788 89999999999998753 257899999999999999999999999986 4456799999999
Q ss_pred CCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhc
Q 013060 126 GQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYG 205 (450)
Q Consensus 126 G~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~ 205 (450)
||+.+|.++|+..|+++.+++|||||||||||++|+||+.+|++||+.+|.+|++||||||.+.++..|||..|+..+|+
T Consensus 70 G~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~ 149 (316)
T cd07417 70 GQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN 149 (316)
T ss_pred CCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc
Confidence 99999999999999987777799999999999999999999999999999999999999999999999999999999996
Q ss_pred CcchhhhhhhhhhhcCCCceeeecCcEEeeccCCCCccCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCC
Q 013060 206 DKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLD 285 (450)
Q Consensus 206 ~~~~~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~ 285 (450)
..+|..+.++|++||+++++++++|||||||++. ...++++|.++.|+...
T Consensus 150 ---~~l~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~--------------------------~~~~l~~i~~i~r~~~~ 200 (316)
T cd07417 150 ---EQMFDLFSEVFNWLPLAHLINGKVLVVHGGLFSD--------------------------DGVTLDDIRKIDRFRQP 200 (316)
T ss_pred ---HHHHHHHHHHHHhchHhheeCCeEEEEccccccC--------------------------CCccHHHhhcccCCCCC
Confidence 4799999999999999999999999999999642 23689999999997432
Q ss_pred CCCCCCCCCCCcCCcccccCCCCcCCCCccCCCCCeeeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCce
Q 013060 286 PPWNPQLSSNLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYT 365 (450)
Q Consensus 286 ~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~ 365 (450)
+.+.+++|+|||||....++.++ +||.|+.||++++++||++|++++||||||+ +++||+
T Consensus 201 -------~~~~~~~dllWsDP~~~~~~~~s-~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~ 260 (316)
T cd07417 201 -------PDSGLMCELLWSDPQPQPGRSPS-KRGVGCQFGPDVTKRFLEENNLEYIIRSHEV------------KDEGYE 260 (316)
T ss_pred -------CccccceeeeecCCCCCCCCCcc-CCCCceEeCHHHHHHHHHHcCCcEEEECCcc------------cceeEE
Confidence 23457899999999988888765 7999999999999999999999999999997 679999
Q ss_pred eeccCCCCeEEEEecCCCCCCcccccccCCCcEEEEEEeCCCCCCCceEEEEecCCCCCCCcc
Q 013060 366 IDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNPF 428 (450)
Q Consensus 366 ~~~~~~~gkliTvFSap~Y~~~~~~~~~~~N~gA~l~i~~~~~~~~~~~~f~~~~~~~~~~~~ 428 (450)
+.| +|+|+||||||||| +.++|+||+|.|+..+ .+++|++|++. ++|...|.
T Consensus 261 ~~~---~~~~~TvfSa~~Y~------~~~~N~ga~~~i~~~~-~~~~~~~~~~~-~~~~~~~~ 312 (316)
T cd07417 261 VEH---DGKCITVFSAPNYC------DQMGNKGAFIRITGSD-LKPKFTQFEAV-PHPNVKPM 312 (316)
T ss_pred Eec---CCeEEEEeCCcccc------CCCCcceEEEEEeCCC-ceeeeEeccCC-CCCCCCcc
Confidence 876 59999999999999 6789999999998743 48899999987 88888773
No 5
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-69 Score=499.72 Aligned_cols=282 Identities=34% Similarity=0.555 Sum_probs=258.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCCh
Q 013060 81 PSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG 160 (450)
Q Consensus 81 ~~~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s 160 (450)
++.+|++++..||+.++++|..|.|++.++. |+.|+|||||||+||+.+|+..|-.+..+ |||+|||||||.+|
T Consensus 16 ckyLpE~elk~LCe~v~d~L~eEsNvqPV~t-----PVTvCGDIHGQFyDL~eLFrtgG~vP~tn-YiFmGDfVDRGyyS 89 (306)
T KOG0373|consen 16 CKYLPENELKRLCEMVKDILMEESNVQPVST-----PVTVCGDIHGQFYDLLELFRTGGQVPDTN-YIFMGDFVDRGYYS 89 (306)
T ss_pred cCCCCHHHHHHHHHHHHHHHhhhcCccccCC-----CeeEeeccchhHHHHHHHHHhcCCCCCcc-eEEecccccccccc
Confidence 3579999999999999999999999999988 99999999999999999999999777555 99999999999999
Q ss_pred HHHHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcchhhhhhhhhhhcCCCceeeecCcEEeeccCCC
Q 013060 161 LETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLF 240 (450)
Q Consensus 161 ~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~ 240 (450)
+|++.+|+.||.+||.+|.+||||||++.++..|||++||..+||.. ..|+.+.++|+.|++||+|+++|+|||||+|
T Consensus 90 LEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGna--n~wkycckVFD~LtlaAiID~~vLCVHGGLS 167 (306)
T KOG0373|consen 90 LETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNA--NVWKYCCKVFDFLTLAAIIDEKVLCVHGGLS 167 (306)
T ss_pred HHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCc--hHHHHHHHHHhhhhHHHHhcCcEEEEcCCCC
Confidence 99999999999999999999999999999999999999999999975 8999999999999999999999999999999
Q ss_pred CccCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCCCcCCCCccCCCCC
Q 013060 241 RSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGLSENTERGI 320 (450)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~ 320 (450)
|. +.++|+|+-+.|.... |.+ | -+||++||||.....|..+ +||+
T Consensus 168 Pd---------------------------irtlDqir~i~R~qEi-Ph~---G---~fcDlmWSDPedve~W~vS-pRGA 212 (306)
T KOG0373|consen 168 PD---------------------------IRTLDQIRLIERNQEI-PHE---G---PFCDLMWSDPEDVETWAVS-PRGA 212 (306)
T ss_pred cc---------------------------ceeHHHHHhHHhhccC-CCC---C---CccceeccChhhhhhheeC-CCCc
Confidence 84 4799999999998643 333 4 4899999999998888875 8999
Q ss_pred eeeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEecCCCCCCcccccccCCCcEEE
Q 013060 321 GLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAY 400 (450)
Q Consensus 321 g~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~gkliTvFSap~Y~~~~~~~~~~~N~gA~ 400 (450)
|++||.+++.+|+..|+|++|.|+||- +++||.+.++ +..|+||||||||| ++.+|.||+
T Consensus 213 GwlFGskVt~eF~~iN~L~LicRaHQL------------V~EG~KymF~--eK~lvTVWSAPNYC------YRCGNvAsi 272 (306)
T KOG0373|consen 213 GWLFGSKVTTEFNHINNLNLICRAHQL------------VQEGFKYMFD--EKGLVTVWSAPNYC------YRCGNVASI 272 (306)
T ss_pred ceeechhhhHHHHhccchHHHHhHHHH------------HHhhHHhccC--CCCEEEEecCCchh------hhccCeeeE
Confidence 999999999999999999999999994 7899999763 44499999999999 899999999
Q ss_pred EEEeCCCCCCCceEEEEecCCCCCCCc
Q 013060 401 IVLKPPKFDIPDFNVFEAVTPRPDVNP 427 (450)
Q Consensus 401 l~i~~~~~~~~~~~~f~~~~~~~~~~~ 427 (450)
|.++++ .++++..|.+++....+.|
T Consensus 273 ~~~d~~--~~r~~k~F~avpd~~~~~p 297 (306)
T KOG0373|consen 273 MSFDDN--LERETKIFSAVPDNSRVIP 297 (306)
T ss_pred EEeccc--CCccceeeeecCCccccCC
Confidence 999875 6899999999965444444
No 6
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=1.4e-66 Score=520.89 Aligned_cols=280 Identities=35% Similarity=0.593 Sum_probs=250.7
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHH
Q 013060 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLE 162 (450)
Q Consensus 83 ~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~e 162 (450)
.++++++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..+.++.+. |||||||||||++|+|
T Consensus 15 ~l~~~~i~~l~~~~~~il~~e~~l~~i~~-----~i~ViGDIHG~~~dL~~l~~~~g~~~~~~-ylFLGDyVDRG~~s~E 88 (305)
T cd07416 15 RLSEEDALRIITEGAEILRQEPNLLRIEA-----PVTVCGDIHGQFYDLLKLFEVGGSPANTR-YLFLGDYVDRGYFSIE 88 (305)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCeEccCC-----CEEEEEeCCCCHHHHHHHHHhcCCCCCce-EEEECCccCCCCChHH
Confidence 57899999999999999999999999988 99999999999999999999999887655 9999999999999999
Q ss_pred HHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcchhhhhhhhhhhcCCCceeeecCcEEeeccCCCCc
Q 013060 163 TFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRS 242 (450)
Q Consensus 163 vl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~~~ 242 (450)
|+.+|+++|+.+|.+|++||||||.+.++..|||..|+..+|+ .++|..+.++|++||+++++++++||||||++|.
T Consensus 89 vi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~---~~l~~~~~~~f~~LPlaaii~~~i~~vHGGi~p~ 165 (305)
T cd07416 89 CVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS---ERVYDACMEAFDCLPLAALMNQQFLCVHGGLSPE 165 (305)
T ss_pred HHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhcc---HHHHHHHHHHHhhccceeEEcCCEEEEcCCCCcc
Confidence 9999999999999999999999999999999999999999985 5899999999999999999999999999999984
Q ss_pred cCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCCCcC-------CCCcc
Q 013060 243 VSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKL-------GLSEN 315 (450)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~-------g~~~n 315 (450)
+.++++|.++.|+... +...+++|+|||||.... +|.+|
T Consensus 166 ---------------------------~~~l~~i~~i~r~~~~-------~~~~~~~dllWsDP~~~~~~~~~~~~~~~~ 211 (305)
T cd07416 166 ---------------------------LKTLDDIRKLDRFREP-------PAFGPMCDLLWSDPLEDFGNEKTQEHFVHN 211 (305)
T ss_pred ---------------------------cccHHHhcccCCCCCC-------CCCCcceeeeecCccccccccccccccccc
Confidence 3689999999997533 223478999999998643 47778
Q ss_pred CCCCCeeeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccC-C--CCeEEEEecCCCCCCcccccc
Q 013060 316 TERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDV-E--SGMCITLFSAPDYPQFQATEE 392 (450)
Q Consensus 316 ~~Rg~g~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~-~--~gkliTvFSap~Y~~~~~~~~ 392 (450)
+.||.|+.||++++++||++|++++||||||+ +++||++.|+. . .++|+||||||||| +
T Consensus 212 ~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~------~ 273 (305)
T cd07416 212 TVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEA------------QDAGYRMYRKSQTTGFPSLITIFSAPNYL------D 273 (305)
T ss_pred CCCCCceecCHHHHHHHHHHcCCeEEEEeccc------------cccceEEecCCCcCCCCcEEEEeCCcccc------C
Confidence 89999999999999999999999999999997 67999987631 0 13999999999999 6
Q ss_pred cCCCcEEEEEEeCCCCCCCceEEEEecCCCCCCCc
Q 013060 393 RFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNP 427 (450)
Q Consensus 393 ~~~N~gA~l~i~~~~~~~~~~~~f~~~~~~~~~~~ 427 (450)
.++|+||+|.|+++ ...|++|+++ |+|...|
T Consensus 274 ~~~N~~a~l~i~~~---~~~~~~~~~~-~~~~~~~ 304 (305)
T cd07416 274 VYNNKAAVLKYENN---VMNIRQFNCS-PHPYWLP 304 (305)
T ss_pred CCCceEEEEEEcCC---cceEEEecCC-CCCCCCC
Confidence 78999999999875 3589999987 8877655
No 7
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=5.9e-67 Score=525.57 Aligned_cols=271 Identities=37% Similarity=0.639 Sum_probs=248.3
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHHHHHHhcC-CCCCCcceEeeCcccCCCCCh
Q 013060 82 SVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAG-FPSKNCFFVFNGDYVDRGAWG 160 (450)
Q Consensus 82 ~~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~~g-~~~~~~~~vfLGDyVDRG~~s 160 (450)
..++.+++.+||.++.++|..+|+++++++ ||.|||||||||.||+++|...| +|+..+ |||||||||||++|
T Consensus 30 ~~l~~~ei~~l~~~~~~if~~~~~l~e~~a-----PV~i~GDiHGq~~DLlrlf~~~g~~pp~~~-ylFLGDYVDRG~~s 103 (331)
T KOG0374|consen 30 VPLSKSEIIKLCDKAREIFLSQPTLLELSA-----PVKIVGDIHGQFGDLLRLFDLLGSFPPDQN-YVFLGDYVDRGKQS 103 (331)
T ss_pred eeccHHHHHHHHHHHHHHhcCCCceeecCC-----CEEEEccCcCCHHHHHHHHHhcCCCCCccc-EEEecccccCCccc
Confidence 348899999999999999999999999998 99999999999999999999999 886655 99999999999999
Q ss_pred HHHHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcchhhhhhhhhhhcCCCceeeecCcEEeeccCCC
Q 013060 161 LETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLF 240 (450)
Q Consensus 161 ~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~ 240 (450)
+|++.+|+++|++||++|++||||||++.+|..|||++||.+||+. ..+|..|++.|++||++|+|+++|+|+|||++
T Consensus 104 lE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~--~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGls 181 (331)
T KOG0374|consen 104 LETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGE--IKLWKAFNDAFNCLPLAALIDGKILCMHGGLS 181 (331)
T ss_pred eEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcch--HHHHHHHHHHHhhCchhheecceEEEecCCCC
Confidence 9999999999999999999999999999999999999999999974 48999999999999999999999999999999
Q ss_pred CccCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCCCc-CCCCccCCCC
Q 013060 241 RSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMK-LGLSENTERG 319 (450)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~-~g~~~n~~Rg 319 (450)
|. +.++++|+.+.|+. +. ++..+++|+|||||... .||.+| .||
T Consensus 182 p~---------------------------l~~~~~i~~i~rp~-~~------~~~gll~DLlWsdp~~~~~g~~~n-~Rg 226 (331)
T KOG0374|consen 182 PH---------------------------LKSLDQIRAIPRPT-DS------PDKGLLCDLLWSDPDDDVPGWEEN-DRG 226 (331)
T ss_pred hh---------------------------hcChHHHhhccCCc-CC------CccceeeeeeecCCCCCCCCcccC-CCc
Confidence 84 47899999999994 43 34458999999999986 799998 599
Q ss_pred CeeeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEecCCCCCCcccccccCCCcEE
Q 013060 320 IGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGA 399 (450)
Q Consensus 320 ~g~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~gkliTvFSap~Y~~~~~~~~~~~N~gA 399 (450)
.++.||++++++||+++++++||||||+ +++||++ +++++|+||||||+|| +.++|.||
T Consensus 227 ~s~~fg~~~v~~f~~~~~ldlivRaHqv------------v~dGyef---fa~r~lvTIFSAP~Yc------g~~~n~ga 285 (331)
T KOG0374|consen 227 VSFTFGPAVVEDFCKKLDLDLIVRAHQV------------VEDGYEF---FAGRKLVTIFSAPNYC------GEFDNAGA 285 (331)
T ss_pred eeeEecHHHHHHHHHHhCcceEEEcCcc------------ccccceE---ecCceEEEEecCchhc------cccCCceE
Confidence 9999999999999999999999999997 7899998 4579999999999999 78999999
Q ss_pred EEEEeCCCCCCCceEEEEe
Q 013060 400 YIVLKPPKFDIPDFNVFEA 418 (450)
Q Consensus 400 ~l~i~~~~~~~~~~~~f~~ 418 (450)
+|.++.. ...+|+...+
T Consensus 286 vm~Vd~~--l~~sf~~l~p 302 (331)
T KOG0374|consen 286 VMRVDKN--LKCSFVILRP 302 (331)
T ss_pred EEEECCC--CeEEEEEecc
Confidence 9999876 3455555554
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=2.8e-66 Score=517.06 Aligned_cols=274 Identities=34% Similarity=0.557 Sum_probs=248.7
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHH
Q 013060 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLE 162 (450)
Q Consensus 83 ~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~e 162 (450)
.++++++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..+.++.+. |||||||||||++++|
T Consensus 15 ~l~~~~i~~l~~~~~~il~~e~~~~~i~~-----~i~vvGDIHG~~~~L~~l~~~~~~~~~~~-~lfLGDyVDRG~~s~e 88 (303)
T PTZ00239 15 CLPERDLKLICERAKEIFLEESNVQPVRA-----PVNVCGDIHGQFYDLQALFKEGGDIPNAN-YIFIGDFVDRGYNSVE 88 (303)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCeEecCC-----CEEEEEeCCCCHHHHHHHHHhcCCCCCce-EEEeeeEcCCCCCHHH
Confidence 57899999999999999999999999987 89999999999999999999999876655 9999999999999999
Q ss_pred HHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcchhhhhhhhhhhcCCCceeeecCcEEeeccCCCCc
Q 013060 163 TFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRS 242 (450)
Q Consensus 163 vl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~~~ 242 (450)
|+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+.. .+|+.+.++|++||++|++++++|||||||+|.
T Consensus 89 vl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~--~~~~~~~~~f~~LPlaaii~~~i~cvHgGi~p~ 166 (303)
T PTZ00239 89 TMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNS--NPWRLFMDVFDCLPLAALIEGQILCVHGGLSPD 166 (303)
T ss_pred HHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcCh--hHHHHHHHHHHhCchheEEcCeEEEEcCccCcc
Confidence 999999999999999999999999999999999999999999853 689999999999999999999999999999984
Q ss_pred cCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCCCcCCCCccCCCCCee
Q 013060 243 VSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGLSENTERGIGL 322 (450)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~ 322 (450)
+.++++|+++.|+...| .+.+++|+|||||....+|.++ .||.|+
T Consensus 167 ---------------------------~~~l~~i~~i~r~~~~~-------~~~~~~dllWsDP~~~~~~~~~-~Rg~g~ 211 (303)
T PTZ00239 167 ---------------------------MRTIDQIRTIDRKIEIP-------HEGPFCDLMWSDPEEVEYWAVN-SRGAGY 211 (303)
T ss_pred ---------------------------cccHhhhccccCCCCCC-------CCCCceeeEecCccccCCCccC-CCCCcc
Confidence 36899999999986432 2346899999999987888876 799999
Q ss_pred eeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEecCCCCCCcccccccCCCcEEEEE
Q 013060 323 LWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIV 402 (450)
Q Consensus 323 ~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~gkliTvFSap~Y~~~~~~~~~~~N~gA~l~ 402 (450)
.||++++++||++|++++||||||+ +++||++.+. +++|+||||||||| +.++|+||+|.
T Consensus 212 ~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~~--~~~~iTvfSa~~Y~------~~~~N~~ail~ 271 (303)
T PTZ00239 212 LFGAKVTKEFCRLNDLTLICRAHQL------------VMEGYKYWFP--DQNLVTVWSAPNYC------YRCGNIASILC 271 (303)
T ss_pred ccCHHHHHHHHHHCCCcEEEEcChh------------hccceEEEeC--CCeEEEEECCCccc------CCCCceEEEEE
Confidence 9999999999999999999999997 6799998652 56799999999999 67899999999
Q ss_pred EeCCCCCCCceEEEEecCC
Q 013060 403 LKPPKFDIPDFNVFEAVTP 421 (450)
Q Consensus 403 i~~~~~~~~~~~~f~~~~~ 421 (450)
++.+ .+++|++|++++.
T Consensus 272 i~~~--~~~~~~~~~~~~~ 288 (303)
T PTZ00239 272 LDEN--LQQTWKTFKEVPE 288 (303)
T ss_pred ECCC--CcEeeEEeeCCCc
Confidence 9875 4778999998743
No 9
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=2.4e-66 Score=514.33 Aligned_cols=271 Identities=41% Similarity=0.637 Sum_probs=248.3
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHH
Q 013060 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLE 162 (450)
Q Consensus 83 ~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~e 162 (450)
.++.+++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..++++.+. |||||||||||++|+|
T Consensus 14 ~l~~~~~~~l~~~~~~il~~e~~~~~i~~-----~i~vvGDIHG~~~dL~~ll~~~~~~~~~~-~lfLGDyVDRG~~s~e 87 (285)
T cd07415 14 LLPESEVKSLCEKAKEILVKESNVQRVRS-----PVTVCGDIHGQFYDLLELFRVGGDPPDTN-YLFLGDYVDRGYYSVE 87 (285)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEecCC-----CEEEEEeCCCCHHHHHHHHHHcCCCCCCe-EEEEeEECCCCcCHHH
Confidence 57899999999999999999999999987 99999999999999999999999877655 9999999999999999
Q ss_pred HHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcchhhhhhhhhhhcCCCceeeecCcEEeeccCCCCc
Q 013060 163 TFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRS 242 (450)
Q Consensus 163 vl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~~~ 242 (450)
|+.+|++||+.+|.++++||||||.+.++..|||..||..+|+. ..+|..+.++|++||++|++++++|||||||+|.
T Consensus 88 vl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~--~~l~~~~~~~f~~lPlaaii~~~i~cvHgGi~p~ 165 (285)
T cd07415 88 TFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGN--ANVWKYCTDLFDYLPLAALIDNQIFCVHGGLSPS 165 (285)
T ss_pred HHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCc--hHHHHHHHHHHHHhHHHhEeCCeEEEEcCCCCCC
Confidence 99999999999999999999999999999999999999999974 4799999999999999999999999999999984
Q ss_pred cCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCCCcCCCCccCCCCCee
Q 013060 243 VSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGLSENTERGIGL 322 (450)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~ 322 (450)
. .++++|.++.|+... +.+.++.|+|||||....+|.++ .||.|+
T Consensus 166 ~---------------------------~~~~~i~~i~r~~~~-------~~~~~~~dllWsDP~~~~~~~~~-~Rg~g~ 210 (285)
T cd07415 166 I---------------------------DTLDQIRAIDRFQEV-------PHEGPMCDLLWSDPDDIEGWGIS-PRGAGY 210 (285)
T ss_pred c---------------------------ccHHHhhcccCCCCC-------CCCCCccceEecCCCccCCCCcC-CCCCcc
Confidence 3 688999999998533 22346899999999988888876 799999
Q ss_pred eeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEecCCCCCCcccccccCCCcEEEEE
Q 013060 323 LWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIV 402 (450)
Q Consensus 323 ~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~gkliTvFSap~Y~~~~~~~~~~~N~gA~l~ 402 (450)
.||++++++||++|++++||||||+ +++||++.| +|+|+||||||||| +.++|+||+|.
T Consensus 211 ~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~---~~~~~TvfSa~~y~------~~~~n~~a~l~ 269 (285)
T cd07415 211 LFGQDVVEEFNHNNGLTLICRAHQL------------VMEGYQWMF---DDKLVTVWSAPNYC------YRCGNVASIME 269 (285)
T ss_pred ccCHHHHHHHHHHCCCeEEEEcCcc------------ccceEEEec---CCcEEEEecCCccc------CCCCceEEEEE
Confidence 9999999999999999999999997 679999976 59999999999999 67899999999
Q ss_pred EeCCCCCCCceEEEEec
Q 013060 403 LKPPKFDIPDFNVFEAV 419 (450)
Q Consensus 403 i~~~~~~~~~~~~f~~~ 419 (450)
|+++ .+.+|.+|++.
T Consensus 270 i~~~--~~~~~~~~~~~ 284 (285)
T cd07415 270 LDEH--LKRSFKVFEAA 284 (285)
T ss_pred ECCC--CcEeEEEeccC
Confidence 9874 57789998864
No 10
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=8.3e-66 Score=515.58 Aligned_cols=279 Identities=33% Similarity=0.600 Sum_probs=249.9
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChH
Q 013060 82 SVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL 161 (450)
Q Consensus 82 ~~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~ 161 (450)
..++++++.+||++|+++|++||++++++. +++|||||||++.+|.++|+..++++.+. |||||||||||++++
T Consensus 30 ~~l~~~~i~~l~~~~~~il~~ep~ll~i~~-----~i~vvGDIHG~~~dL~~l~~~~g~~~~~~-ylfLGDyVDRG~~s~ 103 (320)
T PTZ00480 30 VNLTEAEVRGLCIKARDIFISQPILLELEA-----PLKICGDVHGQYFDLLRLFEYGGYPPESN-YLFLGDYVDRGKQSL 103 (320)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCceEecCC-----CeEEEeecccCHHHHHHHHHhcCCCCcce-EEEeceecCCCCCcH
Confidence 368999999999999999999999999987 99999999999999999999999987766 999999999999999
Q ss_pred HHHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcchhhhhhhhhhhcCCCceeeecCcEEeeccCCCC
Q 013060 162 ETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFR 241 (450)
Q Consensus 162 evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~~ 241 (450)
||+.+|+++|+.+|.+|++||||||.+.++..|||..|+..+|+ ..+|..++++|.+||+||+|++++|||||||+|
T Consensus 104 evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~---~~l~~~~~~~F~~LPlaAiI~~~i~cvHGGI~p 180 (320)
T PTZ00480 104 ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT---IKLWKTFTDCFNCLPVAALIDEKILCMHGGLSP 180 (320)
T ss_pred HHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC---HHHHHHHHHHHHhccHhheecCcEEEEcCCcCc
Confidence 99999999999999999999999999999999999999999995 479999999999999999999999999999998
Q ss_pred ccCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCCCc-CCCCccCCCCC
Q 013060 242 SVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMK-LGLSENTERGI 320 (450)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~-~g~~~n~~Rg~ 320 (450)
. +.++++|+++.|+... +++.+++|+|||||... .+|.++ .||.
T Consensus 181 ~---------------------------~~~l~~i~~i~rp~~~-------~~~~~~~dllWSDP~~~~~~~~~s-~RG~ 225 (320)
T PTZ00480 181 E---------------------------LSNLEQIRRIMRPTDV-------PDTGLLCDLLWSDPDKDVQGWADN-ERGV 225 (320)
T ss_pred c---------------------------cCCHHHHhcccCCCCC-------CccchhhheeecCcccccCCCccC-CCCC
Confidence 4 3689999999998643 33457899999999874 577776 7999
Q ss_pred eeeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEecCCCCCCcccccccCCCcEEE
Q 013060 321 GLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAY 400 (450)
Q Consensus 321 g~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~gkliTvFSap~Y~~~~~~~~~~~N~gA~ 400 (450)
|++||++++++||++|++++||||||+ +++||++.| +++|+||||||||| +.++|+||+
T Consensus 226 g~~FG~~~~~~Fl~~n~l~~IiR~Hq~------------v~~G~~~~~---~~~~iTvFSa~~Y~------~~~~N~ga~ 284 (320)
T PTZ00480 226 SYVFSQEIVQVFLKKHELDLICRAHQV------------VEDGYEFFS---KRQLVTLFSAPNYC------GEFDNAGSM 284 (320)
T ss_pred ccccCHHHHHHHHHhCCCcEEEEcCcc------------ccCceEEeC---CCcEEEEeCCcccC------CCCCccEEE
Confidence 999999999999999999999999997 679999866 69999999999999 678999999
Q ss_pred EEEeCCCCCCCceEEEEecCCCCCCCcccc
Q 013060 401 IVLKPPKFDIPDFNVFEAVTPRPDVNPFYD 430 (450)
Q Consensus 401 l~i~~~~~~~~~~~~f~~~~~~~~~~~~~~ 430 (450)
+.|+++ ...+|++|++ .+...+.-|
T Consensus 285 l~i~~~--~~~~~~~~~p---~~~~~~~~~ 309 (320)
T PTZ00480 285 MTIDES--LMCSFQILKP---AEQGQGASQ 309 (320)
T ss_pred EEECCC--CcEeEEEecC---Ccccccccc
Confidence 999875 3557777764 333444444
No 11
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=7.1e-65 Score=505.33 Aligned_cols=270 Identities=31% Similarity=0.575 Sum_probs=245.3
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChH
Q 013060 82 SVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL 161 (450)
Q Consensus 82 ~~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~ 161 (450)
..++.+++.+||++|+++|++||+++++++ +++||||||||+.+|.++|+..++++.+. |||||||||||++|+
T Consensus 23 ~~i~~~~i~~l~~~~~~il~~e~~ll~i~~-----p~~ViGDIHG~~~~L~~l~~~~~~~~~~~-~lfLGDyVDRG~~s~ 96 (294)
T PTZ00244 23 ILIREEDIRAVLTEVREIFMSQPMLLEIRP-----PVRVCGDTHGQYYDLLRIFEKCGFPPYSN-YLFLGDYVDRGKHSV 96 (294)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeEeccC-----CceeeccCCCCHHHHHHHHHHcCCCCccc-EEEeeeEecCCCCHH
Confidence 468899999999999999999999999987 89999999999999999999999987666 999999999999999
Q ss_pred HHHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcchhhhhhhhhhhcCCCceeeecCcEEeeccCCCC
Q 013060 162 ETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFR 241 (450)
Q Consensus 162 evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~~ 241 (450)
||+.+++++|+.+|.++++||||||.+.++..|||..|+..+|+ ..+|..+.++|+.||++|++++++||||||++|
T Consensus 97 evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~---~~l~~~~~~~f~~lPlaaii~~~il~vHgGi~p 173 (294)
T PTZ00244 97 ETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN---IKLFKAFTDVFNTMPVCCVISEKIICMHGGLSP 173 (294)
T ss_pred HHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh---HHHHHHHHHHHHhCchheEecCeeEEEcCCCCc
Confidence 99999999999999999999999999999999999999999996 479999999999999999999999999999998
Q ss_pred ccCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCCCc-CCCCccCCCCC
Q 013060 242 SVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMK-LGLSENTERGI 320 (450)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~-~g~~~n~~Rg~ 320 (450)
.. .++++|+.+.|+... +.+.+++|+|||||... .+|.++ .||.
T Consensus 174 ~~---------------------------~~l~~i~~i~rp~~~-------~~~~~~~dllWsDP~~~~~~~~~~-~Rg~ 218 (294)
T PTZ00244 174 DL---------------------------TSLASVNEIERPCDV-------PDRGILCDLLWADPEDEVRGFLES-DRGV 218 (294)
T ss_pred hh---------------------------hHHHHhhhhccccCC-------CccchhheeeecCcccccCCCCcC-CCCC
Confidence 43 578999999998633 23457899999999874 577665 7999
Q ss_pred eeeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEecCCCCCCcccccccCCCcEEE
Q 013060 321 GLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAY 400 (450)
Q Consensus 321 g~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~gkliTvFSap~Y~~~~~~~~~~~N~gA~ 400 (450)
|+.||++++++||++|++++||||||+ +++||++.| +|+|+||||||||| +.++|+||+
T Consensus 219 g~~fg~~~~~~Fl~~n~l~~iiR~Hq~------------~~~G~~~~~---~~~~iTvfSa~~Y~------~~~~N~~a~ 277 (294)
T PTZ00244 219 SYLFGEDIVNDFLDMVDMDLIVRAHQV------------MERGYGFFA---SRQLVTVFSAPNYC------GEFDNDAAV 277 (294)
T ss_pred ccccCHHHHHHHHHHcCCcEEEEcCcc------------ccCceEEcC---CCeEEEEeCCcccc------CCCCceEEE
Confidence 999999999999999999999999997 679999865 69999999999999 678999999
Q ss_pred EEEeCCCCCCCceEEEEe
Q 013060 401 IVLKPPKFDIPDFNVFEA 418 (450)
Q Consensus 401 l~i~~~~~~~~~~~~f~~ 418 (450)
|.|+.+ ...+|++|.+
T Consensus 278 l~i~~~--~~~~f~~~~~ 293 (294)
T PTZ00244 278 MNIDDK--LQCSFLIIPA 293 (294)
T ss_pred EEECCC--CcEeEEEeec
Confidence 999875 3567777654
No 12
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=1.5e-64 Score=503.33 Aligned_cols=269 Identities=35% Similarity=0.646 Sum_probs=244.7
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChH
Q 013060 82 SVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL 161 (450)
Q Consensus 82 ~~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~ 161 (450)
..++++++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..++++.+. |||||||||||++++
T Consensus 21 ~~~~~~~i~~l~~~~~~il~~ep~~l~i~~-----~i~viGDIHG~~~~L~~l~~~~~~~~~~~-~lfLGDyVDRG~~s~ 94 (293)
T cd07414 21 VQLTEAEIRGLCLKSREIFLSQPILLELEA-----PLKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGDYVDRGKQSL 94 (293)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCeEecCC-----ceEEEEecCCCHHHHHHHHHhcCCCCcce-EEEEeeEecCCCCcH
Confidence 468899999999999999999999999987 99999999999999999999999987665 999999999999999
Q ss_pred HHHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcchhhhhhhhhhhcCCCceeeecCcEEeeccCCCC
Q 013060 162 ETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFR 241 (450)
Q Consensus 162 evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~~ 241 (450)
||+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+ ..+|..+.++|++||++|++++++||||||++|
T Consensus 95 e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~---~~l~~~~~~~f~~lPlaa~i~~~i~cvHgGi~p 171 (293)
T cd07414 95 ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN---IKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSP 171 (293)
T ss_pred HHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh---HHHHHHHHHHHHHhHHHHhhCCcEEEEccCCCc
Confidence 99999999999999999999999999999999999999999995 479999999999999999999999999999998
Q ss_pred ccCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCCCc-CCCCccCCCCC
Q 013060 242 SVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMK-LGLSENTERGI 320 (450)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~-~g~~~n~~Rg~ 320 (450)
. +.++++|+++.|+... +.+.+++|+|||||... .+|.+| .||.
T Consensus 172 ~---------------------------~~~l~~i~~i~r~~~~-------~~~~~~~dllWsDP~~~~~~~~~~-~Rg~ 216 (293)
T cd07414 172 D---------------------------LQSMEQIRRIMRPTDV-------PDQGLLCDLLWSDPDKDVQGWGEN-DRGV 216 (293)
T ss_pred c---------------------------cCcHHHHhcccCCCCC-------CchhhHhhhhccCcccccCCCccC-CCCc
Confidence 4 3689999999998533 23447899999999864 566665 7999
Q ss_pred eeeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEecCCCCCCcccccccCCCcEEE
Q 013060 321 GLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAY 400 (450)
Q Consensus 321 g~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~gkliTvFSap~Y~~~~~~~~~~~N~gA~ 400 (450)
|+.||++++++||++||+++||||||+ +++||++.+ +++|+||||||||| +.++|+||+
T Consensus 217 g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~---~~~~iTvfSa~~Y~------~~~~N~~a~ 275 (293)
T cd07414 217 SFTFGKDVVAKFLNKHDLDLICRAHQV------------VEDGYEFFA---KRQLVTLFSAPNYC------GEFDNAGAM 275 (293)
T ss_pred ceecCHHHHHHHHHHcCCeEEEECCcc------------ccCeEEEeC---CCcEEEEecCCccc------CCCCceEEE
Confidence 999999999999999999999999997 679999865 69999999999999 678999999
Q ss_pred EEEeCCCCCCCceEEEE
Q 013060 401 IVLKPPKFDIPDFNVFE 417 (450)
Q Consensus 401 l~i~~~~~~~~~~~~f~ 417 (450)
|.|+.+ ...+|..|+
T Consensus 276 l~i~~~--~~~~~~~~~ 290 (293)
T cd07414 276 MSVDET--LMCSFQILK 290 (293)
T ss_pred EEECCC--CcEEEEEec
Confidence 999875 355677775
No 13
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=3.9e-64 Score=496.10 Aligned_cols=268 Identities=41% Similarity=0.685 Sum_probs=244.0
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHH
Q 013060 84 FPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLET 163 (450)
Q Consensus 84 l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~ev 163 (450)
++++++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..+.++.+. |||||||||||++|+||
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~-----~i~vvGDiHG~~~~l~~ll~~~~~~~~~~-~vfLGD~VDrG~~s~e~ 74 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSA-----PVTVCGDIHGQFDDLLRLFDLNGPPPDTN-YVFLGDYVDRGPFSIEV 74 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCC-----CEEEEEeCcCCHHHHHHHHHHcCCCCCce-EEEeCCccCCCCChHHH
Confidence 3578999999999999999999999987 99999999999999999999999876655 99999999999999999
Q ss_pred HHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcchhhhhhhhhhhcCCCceeeecCcEEeeccCCCCcc
Q 013060 164 FLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRSV 243 (450)
Q Consensus 164 l~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~~~~ 243 (450)
+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+ ..+|..+.++|++||+++++++++||||||++|.
T Consensus 75 l~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~---~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~- 150 (271)
T smart00156 75 ILLLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG---EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPD- 150 (271)
T ss_pred HHHHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC---HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCc-
Confidence 999999999999999999999999999999999999999996 4899999999999999999999999999999884
Q ss_pred CCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCCC-cCCCCccCCCCCee
Q 013060 244 SHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSM-KLGLSENTERGIGL 322 (450)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~-~~g~~~n~~Rg~g~ 322 (450)
+.++++|+++.|+... ..+.++.|+|||||.. ..+|.+| .||.|+
T Consensus 151 --------------------------~~~l~~i~~i~r~~~~-------~~~~~~~dllWsDP~~~~~~~~~~-~Rg~g~ 196 (271)
T smart00156 151 --------------------------LTTLDDIRKLKRPQEP-------PDEGLLIDLLWSDPDQPVDGFQPS-IRGASY 196 (271)
T ss_pred --------------------------cCCHHHHhcccCCCCC-------CchhhhhheeecCCCcccCCCccC-CCCCcc
Confidence 3789999999998533 3345799999999964 5688877 599999
Q ss_pred eeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEecCCCCCCcccccccCCCcEEEEE
Q 013060 323 LWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIV 402 (450)
Q Consensus 323 ~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~gkliTvFSap~Y~~~~~~~~~~~N~gA~l~ 402 (450)
.||++++++||++|++++||||||+ +++||++.| +|+|+||||||||| +.++|+||++.
T Consensus 197 ~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~---~~~~~TvfSa~~y~------~~~~n~~a~~~ 255 (271)
T smart00156 197 YFGPDAVDEFLKKNNLKLIIRAHQV------------VDDGYEFFH---DRKLVTIFSAPNYC------GRFGNKAAVLK 255 (271)
T ss_pred ccCHHHHHHHHHHCCCeEEEecCcc------------cCCcEEEec---CCcEEEEECCcccc------cCCCceEEEEE
Confidence 9999999999999999999999997 679999976 59999999999999 67899999999
Q ss_pred EeCCCCCCCceEEEEe
Q 013060 403 LKPPKFDIPDFNVFEA 418 (450)
Q Consensus 403 i~~~~~~~~~~~~f~~ 418 (450)
|+++ .+++|.+|++
T Consensus 256 i~~~--~~~~~~~~~~ 269 (271)
T smart00156 256 VDKD--LKLSFEQFKP 269 (271)
T ss_pred ECCC--CcEEEEEecC
Confidence 9875 5778888864
No 14
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=4.5e-64 Score=492.21 Aligned_cols=283 Identities=32% Similarity=0.569 Sum_probs=251.7
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHH
Q 013060 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLE 162 (450)
Q Consensus 83 ~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~e 162 (450)
.+.++....|+.++..+|++|++++++++ ||.|||||||||.||+++|+..|-|...+ |+|||||||||.+|+|
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~A-----PiTVCGDIHGQf~DLmKLFEVGG~PA~t~-YLFLGDYVDRGyFSiE 133 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEA-----PITVCGDIHGQFFDLMKLFEVGGSPANTR-YLFLGDYVDRGYFSIE 133 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccC-----CeeEecccchHHHHHHHHHHccCCcccce-eEeeccccccceeeee
Confidence 57888999999999999999999999998 99999999999999999999988876655 9999999999999999
Q ss_pred HHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcchhhhhhhhhhhcCCCceeeecCcEEeeccCCCCc
Q 013060 163 TFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRS 242 (450)
Q Consensus 163 vl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~~~ 242 (450)
|+.+|.+||+.||..+++||||||++.++..+.|..||..+|. ..+|+++++.|++||+||+.++.++|||||+||
T Consensus 134 CvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYs---e~vYdaCmesFd~LPLAAlmNqQflCVHGGlSP- 209 (517)
T KOG0375|consen 134 CVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS---ERVYDACMESFDCLPLAALMNQQFLCVHGGLSP- 209 (517)
T ss_pred hHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhcc---HHHHHHHHHHhccchHHHHhcCceEEecCCCCc-
Confidence 9999999999999999999999999999999999999999996 589999999999999999999999999999998
Q ss_pred cCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCCCcC-------CCCcc
Q 013060 243 VSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKL-------GLSEN 315 (450)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~-------g~~~n 315 (450)
++.+++||+++.|+..+|. .+.+||+|||||.++- -+..|
T Consensus 210 --------------------------Ei~tl~DIr~l~RF~EpPa-------~GpmCDLLWsDPlEdfgnek~~e~f~hN 256 (517)
T KOG0375|consen 210 --------------------------EIHTLDDIRKLDRFKEPPA-------FGPMCDLLWSDPLEDFGNEKTSEHFTHN 256 (517)
T ss_pred --------------------------ccccHHHHHhhhhccCCCc-------cCcchhhhccChhhhccccccccccccC
Confidence 5689999999999974432 2369999999999742 47889
Q ss_pred CCCCCeeeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEecCCCCCCcccccccCC
Q 013060 316 TERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFR 395 (450)
Q Consensus 316 ~~Rg~g~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~gkliTvFSap~Y~~~~~~~~~~~ 395 (450)
+.||+++.|...++++||+.|||--|||+||.+|+.. |..+..--+|| ..||||||||||. +.++
T Consensus 257 svRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGY-RMYrksqttGF--------PSLiTiFSAPNYL------DvYn 321 (517)
T KOG0375|consen 257 SVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGY-RMYRKSQTTGF--------PSLITIFSAPNYL------DVYN 321 (517)
T ss_pred ccccccceechHHHHHHHHhCCchhhhhhhhhhhhhh-hhhhcccccCC--------chheeeecCCchh------hhhc
Confidence 9999999999999999999999999999999987643 22233345664 6899999999999 7899
Q ss_pred CcEEEEEEeCCCCCCCceEEEEecCCCCCCCc
Q 013060 396 NKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNP 427 (450)
Q Consensus 396 N~gA~l~i~~~~~~~~~~~~f~~~~~~~~~~~ 427 (450)
|+|||+..+++ .....||... |+|--.|
T Consensus 322 NKAAvLKYEnN---VMNIRQFncS-PHPYWLP 349 (517)
T KOG0375|consen 322 NKAAVLKYENN---VMNIRQFNCS-PHPYWLP 349 (517)
T ss_pred cHHHHhhhhcc---cceeeccCCC-CCCcccc
Confidence 99999999875 3457899865 7744333
No 15
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=3e-62 Score=491.22 Aligned_cols=279 Identities=35% Similarity=0.580 Sum_probs=244.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCC-------CcceEee
Q 013060 78 SEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSK-------NCFFVFN 150 (450)
Q Consensus 78 ~~~~~~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~~g~~~~-------~~~~vfL 150 (450)
.+.+..++.+++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..+++.. +..||||
T Consensus 15 ~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~-----~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfL 89 (311)
T cd07419 15 TDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRA-----PIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFL 89 (311)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCC-----CEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEE
Confidence 4455678999999999999999999999999987 999999999999999999999998754 2459999
Q ss_pred CcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCc---chhhhhhhhhhhcCCCceee
Q 013060 151 GDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDK---GKHAYRKCLGCFEGLPLASL 227 (450)
Q Consensus 151 GDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~---~~~~~~~~~~~f~~LPlaai 227 (450)
|||||||++|+||+.+|++||+.+|.+|++||||||.+.++..|||..++..+|+.. +..+|..+.++|++||++++
T Consensus 90 GDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~av 169 (311)
T cd07419 90 GDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAI 169 (311)
T ss_pred CCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhhe
Confidence 999999999999999999999999999999999999999999999999999999862 35799999999999999999
Q ss_pred ecCcEEeeccCCCCccCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCC
Q 013060 228 IGKHVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPS 307 (450)
Q Consensus 228 i~~~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~ 307 (450)
++++++|||||++|. +.++++|..+.|+...+ ..+.+++|+|||||.
T Consensus 170 i~~~~l~vHgGi~p~---------------------------~~~l~~i~~i~r~~~~~------~~~~~~~dllWsDP~ 216 (311)
T cd07419 170 IEDKILCMHGGIGRS---------------------------INHVSEIEDLKRPLTME------FGEQVVMDLLWSDPT 216 (311)
T ss_pred ecccEEEEccCCCCC---------------------------CCcHHHHhhcCCCCCCC------CCCcceeeeeccCcc
Confidence 999999999999984 36899999999986332 234478999999999
Q ss_pred Cc---CCCCccC--CCCCe--eeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEec
Q 013060 308 MK---LGLSENT--ERGIG--LLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFS 380 (450)
Q Consensus 308 ~~---~g~~~n~--~Rg~g--~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~gkliTvFS 380 (450)
.. .++.++. .||.| +.||++++++||++||+++||||||+ +.+||++.+ +|+|+||||
T Consensus 217 ~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~iiRgHe~------------~~~G~~~~~---~~~~iTvfS 281 (311)
T cd07419 217 ENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMIIRAHEC------------VMDGFERFA---QGKLITLFS 281 (311)
T ss_pred ccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEEEechh------------hhCCeEEeC---CCeEEEEec
Confidence 74 3565543 38888 69999999999999999999999996 679999865 699999999
Q ss_pred CCCCCCcccccccCCCcEEEEEEeCCCCCCCceEEEE
Q 013060 381 APDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFE 417 (450)
Q Consensus 381 ap~Y~~~~~~~~~~~N~gA~l~i~~~~~~~~~~~~f~ 417 (450)
||||| +.++|+||+++|+.+ .+.+|.+++
T Consensus 282 a~~y~------~~~~n~~ai~~i~~~--~~~~~~~~~ 310 (311)
T cd07419 282 ATNYC------GTAGNAGAILVLGRD--LTIIPKLIH 310 (311)
T ss_pred CCccc------CCCCceEEEEEECCC--CcEeEEEeC
Confidence 99999 678899999999875 354555443
No 16
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-62 Score=488.55 Aligned_cols=323 Identities=34% Similarity=0.533 Sum_probs=279.8
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEcc
Q 013060 44 VQIPISYPEDGMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGD 123 (450)
Q Consensus 44 ~~~~~~~p~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGD 123 (450)
..|.+++| ++...+..|++.|+.+ +++++.+|..++.+|+++|++.||+-+|+. .....|+||||
T Consensus 108 ~Gp~ls~P----l~~~~i~~lieaFk~k----------q~LH~kYVl~iL~EakK~lkqmPnis~isT-s~S~qVTiCGD 172 (631)
T KOG0377|consen 108 NGPKLSLP----LRKNHIDLLIEAFKKK----------QRLHPKYVLLILREAKKSLKQMPNISRIST-SVSQQVTICGD 172 (631)
T ss_pred CCcccccC----cCchHHHHHHHHHHHh----------hhccHHHHHHHHHHHHHHHHhCCCCCcccc-ccccceEEecc
Confidence 45678999 8899999999999864 478999999999999999999999999987 55668999999
Q ss_pred CCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHH
Q 013060 124 VHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAK 203 (450)
Q Consensus 124 IHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~ 203 (450)
+||.++||.-+|.+.|+|..++.|||+||+||||.+|+|||+.|+++-+.||..+|+.|||||..+||-.|||.+|+..+
T Consensus 173 LHGklDDL~~I~yKNGlPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~K 252 (631)
T KOG0377|consen 173 LHGKLDDLLVILYKNGLPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESK 252 (631)
T ss_pred ccccccceEEEEecCCCCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcchhhhhhhhhhhcCCCceeeecCcEEeeccCCCCccCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhcc
Q 013060 204 YGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSV 283 (450)
Q Consensus 204 ~~~~~~~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~ 283 (450)
|...+..+.+-+.++|++||++.+|+.+||+||||++.+.++ +-|.+|.|..
T Consensus 253 Yk~~~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiSd~Tdl----------------------------~ll~kIeR~k 304 (631)
T KOG0377|consen 253 YKRHGKRILRFLEEVYRWLPIGTIIDSRILVVHGGISDSTDL----------------------------DLLDKIERGK 304 (631)
T ss_pred hhhcccHHHHHHHHHHHhcchhhhcccceEEEecCcccchhH----------------------------HHHhhhhccc
Confidence 999999999999999999999999999999999999986533 3333333321
Q ss_pred ----CCCCCCC---------CCC--CCCcCCcccccCCCCcCCCCccCCCCCeeeeChhhHHHHHHHcCCeEEEEeccCC
Q 013060 284 ----LDPPWNP---------QLS--SNLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGP 348 (450)
Q Consensus 284 ----~~~~~~~---------~~~--~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~~fG~~~~~~FL~~n~l~~IIRgHe~~ 348 (450)
+-||.+. .++ +=..+.|++||||....|+.+|.-||.|++||||++..||++++++++||+|||.
T Consensus 305 ~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECK 384 (631)
T KOG0377|consen 305 YVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECK 384 (631)
T ss_pred eeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeecccC
Confidence 1111100 000 0014679999999999999999999999999999999999999999999999984
Q ss_pred CCcCCCCCCccccCCceeeccCCCCeEEEEecCCCCCCcccccccCCCcEEEEEEeCCCCCCCceEEEEecCCCCCCCcc
Q 013060 349 DARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNPF 428 (450)
Q Consensus 349 ~~~~~r~~~~~v~~Gy~~~~~~~~gkliTvFSap~Y~~~~~~~~~~~N~gA~l~i~~~~~~~~~~~~f~~~~~~~~~~~~ 428 (450)
.+||+|+|+ ++|+|||||+||+. ...|+||++.+.+. .+|.|+||.+.+.+ +..+.
T Consensus 385 ------------peGyEf~Hd---~kvlTiFSASNYYe------~GSNrGAYikl~~~--~~PhfvQY~a~k~t-~~~tl 440 (631)
T KOG0377|consen 385 ------------PEGYEFCHD---NKVLTIFSASNYYE------IGSNRGAYIKLGNQ--LTPHFVQYQAAKQT-KRLTL 440 (631)
T ss_pred ------------CCcceeeeC---CeEEEEEeccchhe------ecCCCceEEEeCCC--CCchHHHHHhhhhh-hhhhH
Confidence 699999994 99999999999994 45699999999765 79999999987544 34455
Q ss_pred ccccc
Q 013060 429 YDFKN 433 (450)
Q Consensus 429 ~~~~~ 433 (450)
.|+..
T Consensus 441 rqR~~ 445 (631)
T KOG0377|consen 441 RQRMG 445 (631)
T ss_pred HHHhh
Confidence 55433
No 17
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-61 Score=457.12 Aligned_cols=282 Identities=38% Similarity=0.598 Sum_probs=255.4
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHHHHHHh
Q 013060 58 VEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRD 137 (450)
Q Consensus 58 ~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~ 137 (450)
..||.+|.+. ..+++.++..+|+.|+++|.+|.++..+.. +++||||+||||++|+++++.
T Consensus 21 d~~ie~L~~c--------------k~lse~~v~~lc~~a~~~L~~e~nV~~v~~-----pvtvcGDvHGqf~dl~ELfki 81 (319)
T KOG0371|consen 21 DPWIEQLYKC--------------KPLSEVDVSSLCLLAKEILDKEENVQPVNC-----PVTVCGDVHGQFHDLIELFKI 81 (319)
T ss_pred ccchHHHHhc--------------CCCccccchhHHHHHHHHHhcccccccccc-----ceEEecCcchhHHHHHHHHHc
Confidence 4577777544 356778888999999999999999999987 999999999999999999988
Q ss_pred cCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcchhhhhhhhh
Q 013060 138 AGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLG 217 (450)
Q Consensus 138 ~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~ 217 (450)
.|..+..+ |+|+|||||||++|+|++.+|.++|++||++|.+||||||.+.+..+|||++||.+|||.. .+|..|.+
T Consensus 82 GG~~pdtn-ylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~a--nvw~~Ftd 158 (319)
T KOG0371|consen 82 GGLAPDTN-YLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNA--NVWKYFTD 158 (319)
T ss_pred cCCCCCcc-eeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccc--cchHHhhh
Confidence 88776655 9999999999999999999999999999999999999999999999999999999999975 89999999
Q ss_pred hhcCCCceeeecCcEEeeccCCCCccCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCc
Q 013060 218 CFEGLPLASLIGKHVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLI 297 (450)
Q Consensus 218 ~f~~LPlaaii~~~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~~~~~~~~~~~~l 297 (450)
.|+.+|+.|+|+++|||.|||++|+. .+++.++.+.|- .+.|.+ + -
T Consensus 159 lfdy~P~tali~~~ifc~HGgLspsi---------------------------~tld~~r~~dr~-~evphe---g---p 204 (319)
T KOG0371|consen 159 LFDYLPLTALIESKIFCLHGGLSPSI---------------------------DTLDLIRLLDRI-QEVPHE---G---P 204 (319)
T ss_pred hhhccchHhhhccceeeccCCcCccc---------------------------chHHHHHHHHHh-hcccCC---C---C
Confidence 99999999999999999999999954 789999999984 455444 4 3
Q ss_pred CCcccccCCCCcCCCCccCCCCCeeeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEE
Q 013060 298 PGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCIT 377 (450)
Q Consensus 298 ~~dlLWsDP~~~~g~~~n~~Rg~g~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~gkliT 377 (450)
+||||||||....||..+ +||+|+.||.++.++|-.+||+++|-|+||- +.+||.|.|. ..++|
T Consensus 205 mcDlLwsdpddr~gwg~s-prgag~tfg~di~~~fn~~n~lslisRahql------------vm~g~nW~~~---~~~vt 268 (319)
T KOG0371|consen 205 MCDLLWSDPDDRCGWGIS-PRGAGYTFGQDISEQFNHKNGLSLISRAHQL------------VMEGYNWYHL---WNVVT 268 (319)
T ss_pred hhheeccCcccCCCCCCC-CCCCCcccchhhHHHhhccCCchHhHHHHHH------------Hhcccceeee---cceeE
Confidence 889999999999999986 7999999999999999999999999999994 6799999985 67779
Q ss_pred EecCCCCCCcccccccCCCcEEEEEEeCCCCCCCceEEEEec
Q 013060 378 LFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAV 419 (450)
Q Consensus 378 vFSap~Y~~~~~~~~~~~N~gA~l~i~~~~~~~~~~~~f~~~ 419 (450)
+||||||| ++.+|.+|++.++.. ..-.|.||++.
T Consensus 269 iFSapnyc------Yrcgn~a~i~e~d~~--~~~~f~q~~ps 302 (319)
T KOG0371|consen 269 IFSAPNYC------YRCGNQAAIMERDDT--KNYDFLQFDPS 302 (319)
T ss_pred EccCCchh------hccccHHHHhhhhhc--cCcceEEecCC
Confidence 99999999 899999999999865 45689999985
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=2.9e-56 Score=455.37 Aligned_cols=305 Identities=42% Similarity=0.714 Sum_probs=278.3
Q ss_pred CCCCCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHH
Q 013060 53 DGMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVL 132 (450)
Q Consensus 53 ~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~ 132 (450)
..++|.+||.++++.++.. ..++...+..|+..+..++.++|++++++. +...++.|+||+|||+++++
T Consensus 162 ~~kvt~e~vk~~~~~~~~~----------~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~-~~d~~~sv~gd~hGqfydl~ 230 (476)
T KOG0376|consen 162 DHKVTLEFVKTLMEVFKNQ----------KKLPKKYAYSILDLAKTILRKLPSLVEISV-PGDVKISVCGDTHGQFYDLL 230 (476)
T ss_pred cchhhHHHHHHHHHhhhcc----------cccccccceeeHHHHhhHHhcCCcceEeec-CCCceEEecCCccccccchh
Confidence 3379999999999776544 345667778999999999999999999996 88999999999999999999
Q ss_pred HHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcchhhh
Q 013060 133 FLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAY 212 (450)
Q Consensus 133 ~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~ 212 (450)
++++..|.|+....|+|.||+||||.+|.|++..+++.|+.+|+++|++|||||+..|+..|||..++..+|.. +.+
T Consensus 231 nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte---~~~ 307 (476)
T KOG0376|consen 231 NIFELNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTE---EMF 307 (476)
T ss_pred hhHhhcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHH---HHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999964 677
Q ss_pred hhhhhhhcCCCceeeecCcEEeeccCCCCccCCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCC
Q 013060 213 RKCLGCFEGLPLASLIGKHVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQL 292 (450)
Q Consensus 213 ~~~~~~f~~LPlaaii~~~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~R~~~~~~~~~~~ 292 (450)
..+.+.|.+||++..|+++++.+|||+++.. -.+++++++|.|+..+
T Consensus 308 ~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~--------------------------~v~l~d~r~i~r~~~~------- 354 (476)
T KOG0376|consen 308 NLFSEVFIWLPLAHLINNKVLVMHGGLFSPD--------------------------GVTLEDFRNIDRFEQP------- 354 (476)
T ss_pred HhhhhhhccccchhhhcCceEEEecCcCCCC--------------------------CccHHHHHhhhhccCC-------
Confidence 7777999999999999999999999998753 2479999999998543
Q ss_pred CCCCcCCcccccCCCCcCCCCccCCCCCeeeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCC
Q 013060 293 SSNLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVES 372 (450)
Q Consensus 293 ~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~ 372 (450)
+++.+++++|||||...+|..++ .||.|+.||++++++||+.|+++.|||||++. +.||++.| +
T Consensus 355 ~~~~~~~~~lws~pq~~~g~s~S-~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~------------d~gy~~eh---~ 418 (476)
T KOG0376|consen 355 PEEGLMCELLWSDPQPANGRSPS-KRGVGLQFGPDVTERFLQDNNLDKIIRSHEVK------------DEGYEVEH---S 418 (476)
T ss_pred cccccccccccCCCccccCCCcc-ccCceeeeCCCchhhHHhhcchHHHhhccccC------------CCceeeec---C
Confidence 45568999999999999999986 79999999999999999999999999999974 68999999 6
Q ss_pred CeEEEEecCCCCCCcccccccCCCcEEEEEEeCCCCCCCceEEEEecCCCCCCCcc
Q 013060 373 GMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNPF 428 (450)
Q Consensus 373 gkliTvFSap~Y~~~~~~~~~~~N~gA~l~i~~~~~~~~~~~~f~~~~~~~~~~~~ 428 (450)
|+|+||||||||| .+++|.||++.+++++ .+|.|++|+++ |||.++|-
T Consensus 419 g~l~tvfsapnyc------d~~~n~ga~i~~~~~~-~~p~~~~~e~v-p~~~~~~m 466 (476)
T KOG0376|consen 419 GKLITVFSAPNYC------DQMGNKGAFIHLEPDD-LTPNFYTFEAV-PHPDVKPM 466 (476)
T ss_pred CcEEEEecCcchh------hhcCCcceEEEecCCC-CccceeecccC-CCCCCCCc
Confidence 9999999999999 6889999999999755 69999999999 99999873
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=4.1e-32 Score=259.14 Aligned_cols=217 Identities=41% Similarity=0.617 Sum_probs=165.9
Q ss_pred EEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccccccccccchH
Q 013060 119 VVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEK 198 (450)
Q Consensus 119 ~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~ 198 (450)
+|||||||++.+|.++++..+....+. +||||||||||+.+.+|+.+++.++.. |.++++|+||||.+.++..+++..
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~-li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~ 78 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDK-LIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYD 78 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCE-EEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcc
Confidence 589999999999999999998865544 999999999999999999999998877 889999999999998887766554
Q ss_pred HHH------HHhcCcchhhhhhhhhhhcCCCceeeecC-cEEeeccCCCCccCCCCCCCcCCCCCCccccCCCCCCCCCC
Q 013060 199 EVM------AKYGDKGKHAYRKCLGCFEGLPLASLIGK-HVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLG 271 (450)
Q Consensus 199 e~~------~~~~~~~~~~~~~~~~~f~~LPlaaii~~-~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 271 (450)
+.. .........++..+.++|..||+++.++. +++|||||+.+.. .
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~---------------------------~ 131 (225)
T cd00144 79 EDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGL---------------------------P 131 (225)
T ss_pred hhhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCcc---------------------------c
Confidence 321 11111245678888999999999999986 9999999998753 1
Q ss_pred CHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCCCcCCCCccCCCCCeeeeChhhHHHHHHHcCCeEEEEeccCCCCc
Q 013060 272 SFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDAR 351 (450)
Q Consensus 272 sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~ 351 (450)
....+. .. .......+++|++|...........++. |+++.+.|++.++.+.|||||++
T Consensus 132 ~~~~~~------~~-------~~~~~~~~~lw~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~---- 190 (225)
T cd00144 132 LEEQIK------EE-------PEDQLPEDLLWSDPLELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTP---- 190 (225)
T ss_pred hHHhhh------cC-------cccccceeeeecCCCCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCcc----
Confidence 111111 01 1223578999999987554443333443 99999999999999999999997
Q ss_pred CCCCCCccccCCceeeccCCCCeEEEEecCCCCCCcccccccCCCcEEEEE
Q 013060 352 QKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIV 402 (450)
Q Consensus 352 ~~r~~~~~v~~Gy~~~~~~~~gkliTvFSap~Y~~~~~~~~~~~N~gA~l~ 402 (450)
+..|+.+. ..++++||+|++.|+ +..+|..+++.
T Consensus 191 --------~~~~~~~~---~~~~~i~IDtg~~~~------~~~~~~l~~~~ 224 (225)
T cd00144 191 --------VEEGYEFG---HDGNLITIDSGCNYC------GGGGNKLAALV 224 (225)
T ss_pred --------ccCccEEc---CCCCEEEEecCCccc------CCCCccEEEEe
Confidence 34555322 258899999999998 44566666553
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.94 E-value=7e-26 Score=220.89 Aligned_cols=125 Identities=22% Similarity=0.381 Sum_probs=98.4
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCC--------CCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCcc
Q 013060 116 SRVVVVGDVHGQLHDVLFLLRDAGFP--------SKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHES 187 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~il~~~g~~--------~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~ 187 (450)
|+++||||||||++.|.++|+++++. +.++++||||||||||++|+|||.+|+.+. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 58999999999999999999998874 344569999999999999999999998874 45689999999999
Q ss_pred cccccccc-------chHHHHHHhcCc----chhhhhhhhhhhcCCCceeeec-CcEEeeccCCCCc
Q 013060 188 KYCTSVYG-------FEKEVMAKYGDK----GKHAYRKCLGCFEGLPLASLIG-KHVFTAHGGLFRS 242 (450)
Q Consensus 188 ~~~~~~~g-------f~~e~~~~~~~~----~~~~~~~~~~~f~~LPlaaii~-~~i~~vHGGi~~~ 242 (450)
++++...+ ...+....|... ...+++.+.++|+.||++.+++ ++++|||||+.+.
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~ 145 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQD 145 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChH
Confidence 87654321 112233334321 2346778899999999998774 6799999999764
No 21
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.92 E-value=6.6e-25 Score=212.43 Aligned_cols=124 Identities=27% Similarity=0.432 Sum_probs=99.3
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCC---------CcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCc
Q 013060 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSK---------NCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHE 186 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~il~~~g~~~~---------~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE 186 (450)
||+.||||||||+.+|.++|+.+++... .+++||||||||||++|.||+.+|++++. +.++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 5899999999999999999999987632 34699999999999999999999998864 357999999999
Q ss_pred ccccccc--------ccchHHHHHHhcCcchhhhhhhhhhhcCCCceeeec-CcEEeeccCCCCc
Q 013060 187 SKYCTSV--------YGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIG-KHVFTAHGGLFRS 242 (450)
Q Consensus 187 ~~~~~~~--------~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~-~~i~~vHGGi~~~ 242 (450)
.++++.. .|+. +....|......+.+.+.+||+.||+...++ ++++|||||+++.
T Consensus 79 ~~l~~~~~~~~~~~~~~~~-~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLE-ETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHhcCCCccccCccc-chHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 9876542 2332 2334444334567788899999999988775 5799999998753
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.92 E-value=1.1e-24 Score=209.53 Aligned_cols=118 Identities=23% Similarity=0.315 Sum_probs=91.0
Q ss_pred EEEccCCCCHHHHHHHHHhcCCCC-------CCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCcccccc
Q 013060 119 VVVGDVHGQLHDVLFLLRDAGFPS-------KNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCT 191 (450)
Q Consensus 119 ~ViGDIHG~~~dL~~il~~~g~~~-------~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~ 191 (450)
+||||||||++.|.++|+.+++.. ..+++|||||||||||+|.+|+.+|+.+.. +.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHH
Confidence 799999999999999999988752 345699999999999999999999998753 45899999999998874
Q ss_pred ccccc-----------------hHHHHHHhcCcchhhhhhhhhhhcCCCceeeecCcEEeeccCCC
Q 013060 192 SVYGF-----------------EKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLF 240 (450)
Q Consensus 192 ~~~gf-----------------~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~ 240 (450)
...+. ..+....++. ..+.++...+||+.||++...+ ++++||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~l~~lP~~~~~~-~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFRE-HSEEHKDWLEWFKTLPLFLDLG-GVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhc-cchhHHHHHHHHhcCCcEEEEC-CEEEEECCcC
Confidence 32211 0122223321 2345677899999999998764 6777999985
No 23
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.91 E-value=1.3e-23 Score=201.48 Aligned_cols=127 Identities=25% Similarity=0.335 Sum_probs=95.1
Q ss_pred eEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCc
Q 013060 107 VVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHE 186 (450)
Q Consensus 107 ~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE 186 (450)
..+.. +..++++||||||||+..|.++|+.+++.+..++++|||||||||++|.|||.+|.. .++++|+||||
T Consensus 9 ~~~~~-~~~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE 81 (218)
T PRK11439 9 QRIAG-HQWRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHE 81 (218)
T ss_pred ecccC-CCCCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchH
Confidence 34544 556799999999999999999999998875555699999999999999999999865 36889999999
Q ss_pred cccccccccchHHHHHHhc--------CcchhhhhhhhhhhcCCCceeee---cCcEEeeccCCC
Q 013060 187 SKYCTSVYGFEKEVMAKYG--------DKGKHAYRKCLGCFEGLPLASLI---GKHVFTAHGGLF 240 (450)
Q Consensus 187 ~~~~~~~~gf~~e~~~~~~--------~~~~~~~~~~~~~f~~LPlaaii---~~~i~~vHGGi~ 240 (450)
.++++...+-....+...| ....+.+....+|++.||+...+ ++++++||||++
T Consensus 82 ~~~l~~~~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 82 QMALDALASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred HHHHHHHHCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 9887643221111122221 11223455667899999998765 357888999984
No 24
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.90 E-value=3.7e-24 Score=211.79 Aligned_cols=122 Identities=18% Similarity=0.260 Sum_probs=97.3
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCcccccccccc
Q 013060 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYG 195 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~g 195 (450)
|+++||||||||+..|.++++++++.+..+.++|||||||||++|.||+.+|..+ +.++++|+||||.+++...+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 5899999999999999999999987655556999999999999999999999876 357999999999988776666
Q ss_pred chH----HHHHHhcCcchhhhhhhhhhhcCCCceeee-cCcEEeeccCCCCcc
Q 013060 196 FEK----EVMAKYGDKGKHAYRKCLGCFEGLPLASLI-GKHVFTAHGGLFRSV 243 (450)
Q Consensus 196 f~~----e~~~~~~~~~~~~~~~~~~~f~~LPlaaii-~~~i~~vHGGi~~~~ 243 (450)
+.. .....+- .....+.+.+|++.+|+...+ ++++++||||++|..
T Consensus 77 ~~~~~~~~~l~~~l--~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~ 127 (275)
T PRK00166 77 IKRNKKKDTLDPIL--EAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQW 127 (275)
T ss_pred CccccchhHHHHHH--ccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCC
Confidence 431 1111111 113345678999999998876 568899999998854
No 25
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.90 E-value=5.1e-23 Score=203.13 Aligned_cols=75 Identities=28% Similarity=0.451 Sum_probs=64.1
Q ss_pred cEEEEccCCCCHHHHHHHHHhcCCC-----CCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCC-cEEEecCCCccccc
Q 013060 117 RVVVVGDVHGQLHDVLFLLRDAGFP-----SKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPH-RVYLLRGNHESKYC 190 (450)
Q Consensus 117 ~i~ViGDIHG~~~dL~~il~~~g~~-----~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~-~v~lLRGNHE~~~~ 190 (450)
++++||||||+++.|.++|+.+... .....+||||||||||++|.+|+.+|++++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 7999999999999999999865421 12345999999999999999999999999888876 68999999998765
Q ss_pred c
Q 013060 191 T 191 (450)
Q Consensus 191 ~ 191 (450)
.
T Consensus 83 ~ 83 (304)
T cd07421 83 A 83 (304)
T ss_pred h
Confidence 3
No 26
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.89 E-value=1.6e-23 Score=205.29 Aligned_cols=120 Identities=20% Similarity=0.277 Sum_probs=96.7
Q ss_pred EEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccccccccccch
Q 013060 118 VVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFE 197 (450)
Q Consensus 118 i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~ 197 (450)
++||||||||+..|.++|+++++.+..+.++|+|||||||++|+||+.+|+.++ .++++|+||||.++++..+|+.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 489999999999999999999987656669999999999999999999999875 5899999999999887666542
Q ss_pred HH----HHHHhcCcchhhhhhhhhhhcCCCceeeecC-cEEeeccCCCCcc
Q 013060 198 KE----VMAKYGDKGKHAYRKCLGCFEGLPLASLIGK-HVFTAHGGLFRSV 243 (450)
Q Consensus 198 ~e----~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~-~i~~vHGGi~~~~ 243 (450)
.. ....+- .....+.+.+|++.+|++..+++ ++++|||||+|..
T Consensus 77 ~~~~~~t~~~~l--~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w 125 (257)
T cd07422 77 KPKKKDTLDDIL--NAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQW 125 (257)
T ss_pred ccccHhHHHHHH--hccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCC
Confidence 11 111111 11234568899999999988865 7899999999864
No 27
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.89 E-value=9.4e-23 Score=194.30 Aligned_cols=122 Identities=25% Similarity=0.329 Sum_probs=90.5
Q ss_pred EEEccCCCCHHHHHHHHHhcCCC-------CCCcceEeeCcccCCCCChHHHHHHHHHhhhh---CCCcEEEecCCCccc
Q 013060 119 VVVGDVHGQLHDVLFLLRDAGFP-------SKNCFFVFNGDYVDRGAWGLETFLLLLAWKVF---LPHRVYLLRGNHESK 188 (450)
Q Consensus 119 ~ViGDIHG~~~dL~~il~~~g~~-------~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~---~p~~v~lLRGNHE~~ 188 (450)
+|||||||++..|.++|+.+++. ...+.+||+|||||||+++.+|+.+|+.|+.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 58999999999999999998763 23456999999999999999999999998754 456899999999999
Q ss_pred cccccccc--hHHHHHHhcC--cchhhh---hhhhhhhcCCCceeeecCcEEeeccCCCC
Q 013060 189 YCTSVYGF--EKEVMAKYGD--KGKHAY---RKCLGCFEGLPLASLIGKHVFTAHGGLFR 241 (450)
Q Consensus 189 ~~~~~~gf--~~e~~~~~~~--~~~~~~---~~~~~~f~~LPlaaii~~~i~~vHGGi~~ 241 (450)
.++..+.+ ..+....... ....++ ..+.+|++.+|+...+++ +++||||+.|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~~-~~fvHag~~~ 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVND-TLFVHGGLGP 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEECC-EEEEeCCcHH
Confidence 88754332 1111111100 001122 245789999999988875 6669999854
No 28
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.89 E-value=1.7e-22 Score=191.90 Aligned_cols=120 Identities=28% Similarity=0.315 Sum_probs=95.3
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCcccccccccc
Q 013060 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYG 195 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~g 195 (450)
++++|||||||++.+|.++++..++....+.++|+|||||||+++.|++.+|.. .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 389999999999999999999988754455599999999999999999998864 36899999999998876544
Q ss_pred --chHHHHHHhcCc------chhhhhhhhhhhcCCCceeeec---CcEEeeccCCCC
Q 013060 196 --FEKEVMAKYGDK------GKHAYRKCLGCFEGLPLASLIG---KHVFTAHGGLFR 241 (450)
Q Consensus 196 --f~~e~~~~~~~~------~~~~~~~~~~~f~~LPlaaii~---~~i~~vHGGi~~ 241 (450)
+..+.+.+++.. ..++++...+||+.||+...++ .++++||||+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~ 131 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPS 131 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCc
Confidence 333444444432 1224566788999999998764 478999999865
No 29
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.87 E-value=3.7e-22 Score=196.58 Aligned_cols=121 Identities=22% Similarity=0.302 Sum_probs=99.0
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCcccccccccc
Q 013060 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYG 195 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~g 195 (450)
|.++||||||||++.|.++|+++++.+..+.++|+||||||||+|+||+.++.++. .++++|+||||.+.+...+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 57999999999999999999999987666669999999999999999999998863 46889999999998887776
Q ss_pred ch-----HHHHHHhcCcchhhhhhhhhhhcCCCceeeec-CcEEeeccCCCCcc
Q 013060 196 FE-----KEVMAKYGDKGKHAYRKCLGCFEGLPLASLIG-KHVFTAHGGLFRSV 243 (450)
Q Consensus 196 f~-----~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~-~~i~~vHGGi~~~~ 243 (450)
+. +.+...+ .......+.+|++.+|+..... .++++|||||+|..
T Consensus 77 ~~~~~~~d~l~~~l---~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w 127 (279)
T TIGR00668 77 ISRNKPKDRLDPLL---EAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQW 127 (279)
T ss_pred CCccCchHHHHHHH---HccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCC
Confidence 52 2222112 1244567899999999987654 46889999999976
No 30
>PHA02239 putative protein phosphatase
Probab=99.86 E-value=9.7e-22 Score=190.60 Aligned_cols=125 Identities=23% Similarity=0.291 Sum_probs=91.8
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCC-CCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccccccccc
Q 013060 116 SRVVVVGDVHGQLHDVLFLLRDAGFPS-KNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVY 194 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~il~~~g~~~-~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~ 194 (450)
|++++||||||++..|.++++.+.... ..+.+||+|||||||++|.+|+..|+.+. ..+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHHh
Confidence 589999999999999999999875432 23459999999999999999999999875 3456899999999998654321
Q ss_pred c-----c---------hHHHHHHhcCcc----------------------------hhhhhhhhhhhcCCCceeeecCcE
Q 013060 195 G-----F---------EKEVMAKYGDKG----------------------------KHAYRKCLGCFEGLPLASLIGKHV 232 (450)
Q Consensus 195 g-----f---------~~e~~~~~~~~~----------------------------~~~~~~~~~~f~~LPlaaii~~~i 232 (450)
+ . -.+....||... ...+..+..|++.||+....++ +
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~~-~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKEDK-Y 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEECC-E
Confidence 1 0 122334554220 1123455668999999988754 6
Q ss_pred EeeccCCCCc
Q 013060 233 FTAHGGLFRS 242 (450)
Q Consensus 233 ~~vHGGi~~~ 242 (450)
++||||+.|.
T Consensus 159 ifVHAGi~p~ 168 (235)
T PHA02239 159 IFSHSGGVSW 168 (235)
T ss_pred EEEeCCCCCC
Confidence 6699999763
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.86 E-value=1.9e-21 Score=186.57 Aligned_cols=128 Identities=23% Similarity=0.259 Sum_probs=92.1
Q ss_pred eeEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCC
Q 013060 106 CVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNH 185 (450)
Q Consensus 106 l~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNH 185 (450)
+..+.. +...+++||||||||+..|.++++...+....+.++|||||||||++|.||+.+|.+ .++++|||||
T Consensus 6 ~~~~~~-~~~~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNH 78 (218)
T PRK09968 6 YQKINA-HHYRHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNH 78 (218)
T ss_pred eeeccC-CCCCeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECch
Confidence 344544 455699999999999999999999988665555699999999999999999998854 3689999999
Q ss_pred ccccccccccchHHHHHHhcCc--------chhhhhhhhhhhcCCCceeeec---CcEEeeccCCC
Q 013060 186 ESKYCTSVYGFEKEVMAKYGDK--------GKHAYRKCLGCFEGLPLASLIG---KHVFTAHGGLF 240 (450)
Q Consensus 186 E~~~~~~~~gf~~e~~~~~~~~--------~~~~~~~~~~~f~~LPlaaii~---~~i~~vHGGi~ 240 (450)
|.++++....-....+...|.. ..........+++.||+...+. .++++||||++
T Consensus 79 E~~~~~~~~~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 79 EAMALDAFETGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred HHHHHHHHhcCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 9988754311101111111111 1122334466899999988663 47889999984
No 32
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=99.62 E-value=1.7e-17 Score=171.01 Aligned_cols=343 Identities=20% Similarity=0.065 Sum_probs=263.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeeEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccC
Q 013060 76 PPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVD 155 (450)
Q Consensus 76 ~~~~~~~~l~~~~~~~l~~~a~~il~~ep~l~~i~~~~~~~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVD 155 (450)
.+.+..+.+..+++..+++.+.+++..+||+..+-. ...--.+.++|.||++.|+.++++.- |.....|++-|++++
T Consensus 7 ~k~ean~~l~~~~fd~avdlysKaI~ldpnca~~~a-nRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m 83 (476)
T KOG0376|consen 7 LKNEANEALKDKVFDVAVDLYSKAIELDPNCAIYFA-NRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVM 83 (476)
T ss_pred hhhHHhhhcccchHHHHHHHHHHHHhcCCcceeeec-hhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHH
Confidence 344455678888999999999999999999999977 33356889999999999999999865 555667999999999
Q ss_pred CCCChHHHHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCcchhhhhhhhhhhcCCCceeeecCcEEee
Q 013060 156 RGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTA 235 (450)
Q Consensus 156 RG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~~i~~v 235 (450)
++.+..+.+..|...+...|+...+.|++||+..+...++|..+....++..+..++..+...+.. |++..+.+.++=
T Consensus 84 ~l~~~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~~~~-~i~~~y~g~~le- 161 (476)
T KOG0376|consen 84 ALGEFKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEEDMD-LIESDYSGPVLE- 161 (476)
T ss_pred hHHHHHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccccccc-ccccccCCcccc-
Confidence 999999999999999999999999999999999999999999988888876655555444333322 155555555442
Q ss_pred ccCCCCccCCCCCCCcCCCCCCccccCC-CCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCCCcCCCCc
Q 013060 236 HGGLFRSVSHAPSKKPKGKKKNNVVFNP-ETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGLSE 314 (450)
Q Consensus 236 HGGi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~ 314 (450)
|.-+.-.. .++.......+ ........++.+.....+..++++.+ .. +-.|..|+++....|...
T Consensus 162 ~~kvt~e~---------vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve---~~--~~~d~~~sv~gd~hGqfy 227 (476)
T KOG0376|consen 162 DHKVTLEF---------VKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVE---IS--VPGDVKISVCGDTHGQFY 227 (476)
T ss_pred cchhhHHH---------HHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceE---ee--cCCCceEEecCCcccccc
Confidence 22111000 00000000011 11111233444444333334444444 22 568999999999999998
Q ss_pred cCCCCCeeeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEecCCCCCCcccccccC
Q 013060 315 NTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERF 394 (450)
Q Consensus 315 n~~Rg~g~~fG~~~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~gkliTvFSap~Y~~~~~~~~~~ 394 (450)
+..++.+..++++.+..||...++..+++.|.-+.....+-+...++.+|...|+.+++.+.++|+++.+|.++.|...+
T Consensus 228 dl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~ 307 (476)
T KOG0376|consen 228 DLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMF 307 (476)
T ss_pred chhhhHhhcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHH
Confidence 89999999999999999999999999999999888888888888899999888877889999999999999887777788
Q ss_pred CCc-EEEEEEeCCCCCCCceEEEEecCCCCCCCccccccccCCc
Q 013060 395 RNK-GAYIVLKPPKFDIPDFNVFEAVTPRPDVNPFYDFKNAIDS 437 (450)
Q Consensus 395 ~N~-gA~l~i~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 437 (450)
+|. +++.++--..+....|..+....++++..+++++++.++.
T Consensus 308 ~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~l~d~r~i~r~ 351 (476)
T KOG0376|consen 308 NLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVTLEDFRNIDRF 351 (476)
T ss_pred HhhhhhhccccchhhhcCceEEEecCcCCCCCccHHHHHhhhhc
Confidence 888 8888887777788899999999999999999999887776
No 33
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.26 E-value=2e-11 Score=106.46 Aligned_cols=77 Identities=29% Similarity=0.355 Sum_probs=56.6
Q ss_pred CcEEEEccCCCCHHHH---HHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHH--HHhhhhCCCcEEEecCCCccccc
Q 013060 116 SRVVVVGDVHGQLHDV---LFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLL--LAWKVFLPHRVYLLRGNHESKYC 190 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL---~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL--~~Lk~~~p~~v~lLRGNHE~~~~ 190 (450)
++|++|||+|+..... ...+.........+.+|++||++|+|..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4899999999999987 333333222233345999999999999988877765 44455677899999999999865
Q ss_pred cc
Q 013060 191 TS 192 (450)
Q Consensus 191 ~~ 192 (450)
..
T Consensus 81 ~~ 82 (200)
T PF00149_consen 81 NS 82 (200)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.04 E-value=6.7e-10 Score=103.34 Aligned_cols=69 Identities=23% Similarity=0.302 Sum_probs=54.1
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCC--------hHHHHHHHHHhhhhCCCcEEEecCCCcc
Q 013060 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAW--------GLETFLLLLAWKVFLPHRVYLLRGNHES 187 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~--------s~evl~lL~~Lk~~~p~~v~lLRGNHE~ 187 (450)
|++.|+||+||++..+.++++.+.....+. ++++||++|+|+. ..+++..|..+ ...+++++||||.
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~-ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~ 75 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADW-LVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDS 75 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCE-EEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcc
Confidence 689999999999999999888764444444 9999999999873 45666666443 2479999999997
Q ss_pred cc
Q 013060 188 KY 189 (450)
Q Consensus 188 ~~ 189 (450)
..
T Consensus 76 ~~ 77 (182)
T PRK09453 76 EV 77 (182)
T ss_pred hh
Confidence 53
No 35
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.86 E-value=7.2e-09 Score=93.31 Aligned_cols=59 Identities=25% Similarity=0.334 Sum_probs=48.0
Q ss_pred cEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccc
Q 013060 117 RVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 117 ~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
++.++||+||+...+.++++.+.. .+ .++++||+++++.... + .....+++++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d-~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VD-LIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CC-EEEECCccccccccch--------h--hcCCcEEEEeCCCCCc
Confidence 588999999999999999988754 33 4999999999998765 1 1234699999999985
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.75 E-value=2.3e-08 Score=90.74 Aligned_cols=64 Identities=19% Similarity=0.303 Sum_probs=48.1
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccc
Q 013060 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
|++.||||+||++.++..+++.......-+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 589999999999987777666555442234499999999 467777775542 3599999999983
No 37
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.75 E-value=2.6e-07 Score=89.33 Aligned_cols=71 Identities=13% Similarity=0.140 Sum_probs=56.5
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccc
Q 013060 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
+++.+++||||++..|.++++.+.....+. +|++||++++|+..-++..++..+. ..+..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~-vv~~GDl~~~g~~~~~~~~~l~~l~-~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADA-IVLIGNLLPKAAKSEDYAAFFRILG-EAHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCE-EEECCCCCCCCCCHHHHHHHHHHHH-hcCCceEEEcCCCChH
Confidence 689999999999999999998764334444 9999999999977767766665553 2334799999999974
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.65 E-value=4e-07 Score=80.42 Aligned_cols=61 Identities=21% Similarity=0.366 Sum_probs=40.5
Q ss_pred cEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChH--HHHHHHHHhhhhCCCcEEEecCCCccc
Q 013060 117 RVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL--ETFLLLLAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 117 ~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~--evl~lL~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
++.++||+||++. . ...... +.+|++||++++|.... +.+.++..++ . ..++++.||||..
T Consensus 1 ~i~~isD~H~~~~----~---~~~~~~-D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~ 63 (135)
T cd07379 1 RFVCISDTHSRHR----T---ISIPDG-DVLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLT 63 (135)
T ss_pred CEEEEeCCCCCCC----c---CcCCCC-CEEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCc
Confidence 4889999999986 1 122233 44999999999986532 2444444332 1 2367899999974
No 39
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.63 E-value=1.4e-07 Score=91.84 Aligned_cols=111 Identities=23% Similarity=0.293 Sum_probs=74.4
Q ss_pred cEEEEccCCCCHHHHH-HHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCcccccccc--
Q 013060 117 RVVVVGDVHGQLHDVL-FLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSV-- 193 (450)
Q Consensus 117 ~i~ViGDIHG~~~dL~-~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~-- 193 (450)
+|+++|||||++.... +.++..+ .+ .+|++||+++. +.+++..|..+ +..+++++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~~---pD-~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~ 70 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLLQ---PD-LVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYDATFRK 70 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhccC---CC-EEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCcccccccccc
Confidence 7899999999987642 3444332 23 49999999864 56777766554 3459999999998653200
Q ss_pred ------------------c----------------c--------c-hHHHHHHhcCcchhhhhhhhhhhcCCCceeeecC
Q 013060 194 ------------------Y----------------G--------F-EKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGK 230 (450)
Q Consensus 194 ------------------~----------------g--------f-~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~ 230 (450)
+ + + ..++...|+. ...++.+...++.++.+.....
T Consensus 71 k~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi--~s~~eA~~~ive~~~~~~~~~~ 148 (238)
T cd07397 71 KGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGV--ISLEESAQRIIAAAKKAPPDLP 148 (238)
T ss_pred hHHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCC--CCHHHHHHHHHHHhhhcCCCCC
Confidence 0 0 1 1256666763 3566677777887764444455
Q ss_pred cEEeeccCCC
Q 013060 231 HVFTAHGGLF 240 (450)
Q Consensus 231 ~i~~vHGGi~ 240 (450)
.||+.|+++.
T Consensus 149 ~VliaH~~~~ 158 (238)
T cd07397 149 LILLAHNGPS 158 (238)
T ss_pred eEEEeCcCCc
Confidence 8999999975
No 40
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.63 E-value=6e-08 Score=86.51 Aligned_cols=61 Identities=31% Similarity=0.496 Sum_probs=45.2
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCcccc
Q 013060 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~ 189 (450)
|||+++||+|++...+.++++.+. .. +.++++||++|+ .+++..+..+ .+++++||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~~--~~-d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYIN--EP-DFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHHT--TE-SEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHHHhc--CC-CEEEECCCchhH----HHHHHHHhcC------CEEEEeCCccccc
Confidence 689999999999999999999882 23 449999999993 7777777543 6999999999653
No 41
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.55 E-value=2.1e-07 Score=81.19 Aligned_cols=146 Identities=30% Similarity=0.370 Sum_probs=103.5
Q ss_pred ccccccchHHHHHHhcCcchhhhhh---hhhhhcCCCceeeecC-cEEeeccCCCCccCCCCCCCcCCCCCCccccCCCC
Q 013060 190 CTSVYGFEKEVMAKYGDKGKHAYRK---CLGCFEGLPLASLIGK-HVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPET 265 (450)
Q Consensus 190 ~~~~~gf~~e~~~~~~~~~~~~~~~---~~~~f~~LPlaaii~~-~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (450)
++..+++..++...++.. ..|.. ..++|+.||+.++++. .++|.|||+++..
T Consensus 3 l~~~~~~~~~~~~~~~~~--~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~---------------------- 58 (155)
T COG0639 3 LTALYGFYDEKLRKYGEE--LEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGL---------------------- 58 (155)
T ss_pred hhhhhchhHHhhhhcCCc--eeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcch----------------------
Confidence 445677888877777642 34666 9999999999999988 9999999998742
Q ss_pred CCCCCCCHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCCC--cCCCCccCCCCCeeeeChhhHHHHHHHcCCeEEEE
Q 013060 266 NPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSM--KLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIR 343 (450)
Q Consensus 266 ~~~~l~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~--~~g~~~n~~Rg~g~~fG~~~~~~FL~~n~l~~IIR 343 (450)
...++.+..+.|..... . .....+.+.+|+++.. ...|.+. .+|.+..+ .+.+..|+..+..+.+.+
T Consensus 59 ----~~~~~~~~~~~r~~~~~--~---~~~g~~~~~~~~~~~~~~~~~w~~~-~~g~~~~~-~~~~~~f~~~~~~~~~~~ 127 (155)
T COG0639 59 ----DRLLDIIEVLDRLRACE--V---PHAGHTHDLLWSDPDGGDRRIWNPG-PRGVPRDG-GDVTAVFGIVHTPKLIER 127 (155)
T ss_pred ----hhhHHHHHHHhhhhccc--C---CCccccccccCCCCCCCcccccccC-CCCCCccc-cchhhHHhhhcccceEEE
Confidence 13566666666543110 0 1222456669999886 3566654 68877777 788899998888888999
Q ss_pred eccCCCCcCCCCCCccccCCceeeccCCCCeEEEEecCCCCC
Q 013060 344 SHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYP 385 (450)
Q Consensus 344 gHe~~~~~~~r~~~~~v~~Gy~~~~~~~~gkliTvFSap~Y~ 385 (450)
+|+. ++.++...+ ++..+|+|++++||
T Consensus 128 ~~~~------------~~~d~~~~~---~~~~lt~~~~~~~~ 154 (155)
T COG0639 128 AHVL------------YDIDTGAVF---GGGLLTAFSAPNYC 154 (155)
T ss_pred EeEE------------EecCceEEe---CCCeeeEEeccccc
Confidence 9996 334444433 22788999999997
No 42
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.47 E-value=5.4e-06 Score=76.17 Aligned_cols=64 Identities=20% Similarity=0.295 Sum_probs=44.6
Q ss_pred EEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCCh-HHHHHHHHHhhhhCCCcEEEecCCCccc
Q 013060 118 VVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-LETFLLLLAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 118 i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s-~evl~lL~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
|+++|||||++..+.. ........+ .+|+.||++++|... .+.+..|.. .+..++++.||||..
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D-~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~ 65 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEAD-AVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTP 65 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCC-EEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCH
Confidence 5789999999988876 222222333 499999999998763 333333332 345699999999975
No 43
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.25 E-value=3e-06 Score=71.76 Aligned_cols=67 Identities=31% Similarity=0.429 Sum_probs=49.0
Q ss_pred EEEccCCCCHHHHHHHH--HhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCc
Q 013060 119 VVVGDVHGQLHDVLFLL--RDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHE 186 (450)
Q Consensus 119 ~ViGDIHG~~~dL~~il--~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE 186 (450)
+++||+|+......... ........ ..+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~-~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKP-DFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCC-CEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 37999999998887764 23222333 449999999999988877666533333345678999999999
No 44
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.20 E-value=3.7e-06 Score=78.37 Aligned_cols=59 Identities=24% Similarity=0.336 Sum_probs=41.8
Q ss_pred cEEEEccCC-CCHH-----HHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccc
Q 013060 117 RVVVVGDVH-GQLH-----DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 117 ~i~ViGDIH-G~~~-----dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
+|.||||+| |+.. .+.++++. ...+. ++++||+++ .+++.+|..++ ..+++++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~-iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQH-VLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCE-EEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 478999999 6543 35555544 22334 999999987 77777775542 2699999999973
No 45
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.18 E-value=6.2e-05 Score=69.94 Aligned_cols=65 Identities=20% Similarity=0.292 Sum_probs=45.2
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCcccc
Q 013060 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~ 189 (450)
|++.|++|+||...+..+..+.......+. +|.+||++..... ..+.. ....+++.++||.|...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~-vih~GD~~~~~~~-----~~l~~---~~~~~i~~V~GN~D~~~ 66 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDA-VIHAGDSTSPFTL-----DALEG---GLAAKLIAVRGNCDGEV 66 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCE-EEECCCcCCccch-----HHhhc---ccccceEEEEccCCCcc
Confidence 689999999999975555555544444555 9999999975432 11111 02368999999999853
No 46
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.12 E-value=7.8e-06 Score=79.53 Aligned_cols=70 Identities=19% Similarity=0.233 Sum_probs=47.2
Q ss_pred CcEEEEccCCCCH------HHHHHHHHhcCCCCCCcceEeeCcccCC-------CCChHHHHHHHHHhhhhCCCcEEEec
Q 013060 116 SRVVVVGDVHGQL------HDVLFLLRDAGFPSKNCFFVFNGDYVDR-------GAWGLETFLLLLAWKVFLPHRVYLLR 182 (450)
Q Consensus 116 ~~i~ViGDIHG~~------~dL~~il~~~g~~~~~~~~vfLGDyVDR-------G~~s~evl~lL~~Lk~~~p~~v~lLR 182 (450)
|++++|+|+|... ..+.+.++... ...+ .++++||++|. .+...+++.+|..++. .+..++++.
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~-~~~d-~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~ 77 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEA-RQAD-ALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMH 77 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhh-ccCC-EEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEe
Confidence 6899999999542 24555554321 2233 49999999985 2334567777766652 335799999
Q ss_pred CCCccc
Q 013060 183 GNHESK 188 (450)
Q Consensus 183 GNHE~~ 188 (450)
||||..
T Consensus 78 GNHD~~ 83 (241)
T PRK05340 78 GNRDFL 83 (241)
T ss_pred CCCchh
Confidence 999974
No 47
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.07 E-value=2.6e-05 Score=68.79 Aligned_cols=56 Identities=20% Similarity=0.223 Sum_probs=39.1
Q ss_pred EEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCc
Q 013060 119 VVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHE 186 (450)
Q Consensus 119 ~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE 186 (450)
.||||+||....+.++.... ...+. ++++||+. .+++..+..++ ...++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~~--~~~d~-ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVRL--EGVDL-ILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD 56 (129)
T ss_pred CeeccccCccccchHHHhhC--CCCCE-EEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc
Confidence 38999999987777766642 23344 99999984 34555555441 235899999999
No 48
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.03 E-value=1.7e-05 Score=78.74 Aligned_cols=72 Identities=15% Similarity=0.092 Sum_probs=50.6
Q ss_pred CCCcEEEEccCCCC----HHHHHHHHHhcCCCCCCcceEeeCcccCCC--CChHHHHHHHHHhhhhCCCcEEEecCCCcc
Q 013060 114 QDSRVVVVGDVHGQ----LHDVLFLLRDAGFPSKNCFFVFNGDYVDRG--AWGLETFLLLLAWKVFLPHRVYLLRGNHES 187 (450)
Q Consensus 114 ~~~~i~ViGDIHG~----~~dL~~il~~~g~~~~~~~~vfLGDyVDRG--~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~ 187 (450)
+.+++++++|+|.. ...+.++++...-...+ .++++|||+|++ ....++...|..|+.. ..++.+.||||.
T Consensus 48 ~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pD-lVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~ 124 (271)
T PRK11340 48 APFKILFLADLHYSRFVPLSLISDAIALGIEQKPD-LILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDR 124 (271)
T ss_pred CCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCC-EEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCc
Confidence 45799999999976 45567777665443444 499999999954 2334455666666543 359999999997
Q ss_pred c
Q 013060 188 K 188 (450)
Q Consensus 188 ~ 188 (450)
.
T Consensus 125 ~ 125 (271)
T PRK11340 125 P 125 (271)
T ss_pred c
Confidence 4
No 49
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.00 E-value=1e-05 Score=76.85 Aligned_cols=71 Identities=25% Similarity=0.259 Sum_probs=50.8
Q ss_pred CcEEEEccCCCCHH----HHHHHHHhcCCCCCCcceEeeCcccCCCCChH-HHHHHHHHhhhhCCCcEEEecCCCcccc
Q 013060 116 SRVVVVGDVHGQLH----DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL-ETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (450)
Q Consensus 116 ~~i~ViGDIHG~~~----dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~-evl~lL~~Lk~~~p~~v~lLRGNHE~~~ 189 (450)
+++++++|+|+... .+.++++.+.....+ .+++.||++|.+.... ++..++..+ ..+..++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d-~vl~~GD~~~~~~~~~~~~~~~l~~l--~~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPD-LVVLTGDLVDGSVDVLELLLELLKKL--KAPLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCC-EEEEcCcccCCcchhhHHHHHHHhcc--CCCCCEEEECCCccccc
Confidence 68999999998743 566666655433344 4899999999987765 444544443 23457999999999853
No 50
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=97.98 E-value=5.9e-06 Score=75.32 Aligned_cols=67 Identities=27% Similarity=0.140 Sum_probs=46.3
Q ss_pred EEEEccCCCCHHHHHHHHH-hcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccc
Q 013060 118 VVVVGDVHGQLHDVLFLLR-DAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 118 i~ViGDIHG~~~dL~~il~-~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
+.++||||+....+...+. ....... +.++++||+++++.....+. ++.. ...+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~-d~li~~GDi~~~~~~~~~~~-~~~~--~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDA-DILVLAGDIGYLTDAPRFAP-LLLA--LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCC-CEEEECCCCCCCcchHHHHH-HHHh--hcCCccEEEeCCCcceE
Confidence 4689999999877666542 2222333 34999999999987765544 2222 23456799999999986
No 51
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=97.91 E-value=9.3e-05 Score=65.55 Aligned_cols=68 Identities=25% Similarity=0.262 Sum_probs=39.8
Q ss_pred EEEEccCCCCHH----------HHHHHHHhcCCCCCCcceEeeCcccCCCCCh-H-HHHHHHHHhhhhCCCcEEEecCCC
Q 013060 118 VVVVGDVHGQLH----------DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-L-ETFLLLLAWKVFLPHRVYLLRGNH 185 (450)
Q Consensus 118 i~ViGDIHG~~~----------dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s-~-evl~lL~~Lk~~~p~~v~lLRGNH 185 (450)
|+.++|+|=... .|.++++.......+. ++++||+++.|... . +...++..++... ..+++++|||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~-vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNH 78 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDL-VVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNH 78 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCE-EEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCC
Confidence 467899992211 1122343333333444 99999999998742 2 2233344433211 3799999999
Q ss_pred cc
Q 013060 186 ES 187 (450)
Q Consensus 186 E~ 187 (450)
|.
T Consensus 79 D~ 80 (144)
T cd07400 79 DV 80 (144)
T ss_pred eE
Confidence 97
No 52
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.75 E-value=6.8e-05 Score=69.17 Aligned_cols=56 Identities=20% Similarity=0.016 Sum_probs=31.6
Q ss_pred HHHHHhcCCCCCCcceEeeCcccCCCCCh--HHHHHHHHHhhhhCCCcEEEecCCCccc
Q 013060 132 LFLLRDAGFPSKNCFFVFNGDYVDRGAWG--LETFLLLLAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 132 ~~il~~~g~~~~~~~~vfLGDyVDRG~~s--~evl~lL~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
.++.+.+.....+. +|++||++|..... .+....-+.........+++++||||..
T Consensus 31 ~~l~~~~~~~~~d~-lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 31 ERLDRLIEEYGPER-LIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHHhcCCCE-EEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 33333333233344 99999999865433 2222210111223455899999999985
No 53
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.71 E-value=7.3e-05 Score=72.52 Aligned_cols=68 Identities=18% Similarity=0.120 Sum_probs=47.3
Q ss_pred cEEEEccCCCCH------HHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccc
Q 013060 117 RVVVVGDVHGQL------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 117 ~i~ViGDIHG~~------~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
+|.+++|+|+.+ ..|.++++.+.-...+. +|+.||++++.....+++..+..+ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~-vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDH-LHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCE-EEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 588999999653 22455665553333444 999999999876666666655442 345799999999974
No 54
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=97.69 E-value=0.00011 Score=71.11 Aligned_cols=68 Identities=15% Similarity=0.130 Sum_probs=42.7
Q ss_pred EEEEccCCCCH------HHHHHHHHhcCCCCCCcceEeeCcccCCC-----CC--hHHHHHHHHHhhhhCCCcEEEecCC
Q 013060 118 VVVVGDVHGQL------HDVLFLLRDAGFPSKNCFFVFNGDYVDRG-----AW--GLETFLLLLAWKVFLPHRVYLLRGN 184 (450)
Q Consensus 118 i~ViGDIHG~~------~dL~~il~~~g~~~~~~~~vfLGDyVDRG-----~~--s~evl~lL~~Lk~~~p~~v~lLRGN 184 (450)
+++++|+|... ..+++.+..... ..+ .++++||++|.. .. ..++...|..|+. .+..++++.||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d-~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GN 77 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KAD-ALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGN 77 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCC-EEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCC
Confidence 36899999542 234444543321 233 499999999952 11 1345555655542 34579999999
Q ss_pred Cccc
Q 013060 185 HESK 188 (450)
Q Consensus 185 HE~~ 188 (450)
||..
T Consensus 78 HD~~ 81 (231)
T TIGR01854 78 RDFL 81 (231)
T ss_pred Cchh
Confidence 9974
No 55
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.64 E-value=0.00011 Score=72.71 Aligned_cols=69 Identities=20% Similarity=0.270 Sum_probs=43.6
Q ss_pred EEEEccCCCCHHHHHHHHHhcC---CCCCCcceEeeCcccCCCC-ChHHHH-------------HHHHHhhhhCCCcEEE
Q 013060 118 VVVVGDVHGQLHDVLFLLRDAG---FPSKNCFFVFNGDYVDRGA-WGLETF-------------LLLLAWKVFLPHRVYL 180 (450)
Q Consensus 118 i~ViGDIHG~~~dL~~il~~~g---~~~~~~~~vfLGDyVDRG~-~s~evl-------------~lL~~Lk~~~p~~v~l 180 (450)
|+|+||+||+++.+...++... ... -+.+|++||+-..+. ...+.+ .++-. ....|--+++
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~-~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g-~~~~p~~t~f 78 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTK-VDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSG-EKKAPILTIF 78 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCC-CcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcC-CccCCeeEEE
Confidence 5899999999988876544322 222 344999999964433 333332 11111 2235666899
Q ss_pred ecCCCccc
Q 013060 181 LRGNHESK 188 (450)
Q Consensus 181 LRGNHE~~ 188 (450)
|-||||..
T Consensus 79 i~GNHE~~ 86 (262)
T cd00844 79 IGGNHEAS 86 (262)
T ss_pred ECCCCCCH
Confidence 99999974
No 56
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=97.63 E-value=0.0024 Score=61.09 Aligned_cols=69 Identities=20% Similarity=0.175 Sum_probs=40.7
Q ss_pred cEEEEccCCCCH----HHHH----HHHHhcCCCCCCcceEeeCcccCCCCChH--HHHH-HHHHhhhhCCCcEEEecCCC
Q 013060 117 RVVVVGDVHGQL----HDVL----FLLRDAGFPSKNCFFVFNGDYVDRGAWGL--ETFL-LLLAWKVFLPHRVYLLRGNH 185 (450)
Q Consensus 117 ~i~ViGDIHG~~----~dL~----~il~~~g~~~~~~~~vfLGDyVDRG~~s~--evl~-lL~~Lk~~~p~~v~lLRGNH 185 (450)
+++++||+|-.. ..+. .+.+.......+ .+|++||++|.|.... +.+. .+..|. ..+-.++.++|||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d-~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GNH 79 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIA-FVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGNH 79 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCC-EEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCCC
Confidence 689999999522 2232 233333222333 3899999999998433 2222 222222 1234589999999
Q ss_pred cc
Q 013060 186 ES 187 (450)
Q Consensus 186 E~ 187 (450)
|.
T Consensus 80 D~ 81 (214)
T cd07399 80 DL 81 (214)
T ss_pred cc
Confidence 94
No 57
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.62 E-value=0.00013 Score=71.73 Aligned_cols=72 Identities=22% Similarity=0.222 Sum_probs=46.9
Q ss_pred CcEEEEccCC-CC-----------HHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHH----HHHHHhhhhCCCcEE
Q 013060 116 SRVVVVGDVH-GQ-----------LHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETF----LLLLAWKVFLPHRVY 179 (450)
Q Consensus 116 ~~i~ViGDIH-G~-----------~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl----~lL~~Lk~~~p~~v~ 179 (450)
|+++.++|+| |. ...|.++++.+.-...+. +|+.||++|+..-+.+.. .++..|+-..+-.++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~-lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~ 79 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDA-LLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIV 79 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCE-EEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEE
Confidence 5899999999 32 234445555443333444 999999999986554433 333344332235799
Q ss_pred EecCCCccc
Q 013060 180 LLRGNHESK 188 (450)
Q Consensus 180 lLRGNHE~~ 188 (450)
++.||||..
T Consensus 80 ~i~GNHD~~ 88 (253)
T TIGR00619 80 VISGNHDSA 88 (253)
T ss_pred EEccCCCCh
Confidence 999999985
No 58
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.58 E-value=0.00018 Score=71.01 Aligned_cols=73 Identities=22% Similarity=0.165 Sum_probs=47.2
Q ss_pred cEEEEccCC-CC------------HHHHHHHHHhcCCCCCCcceEeeCcccCCCCC-hHHHHHHHHHhhhhCCCcEEEec
Q 013060 117 RVVVVGDVH-GQ------------LHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAW-GLETFLLLLAWKVFLPHRVYLLR 182 (450)
Q Consensus 117 ~i~ViGDIH-G~------------~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~-s~evl~lL~~Lk~~~p~~v~lLR 182 (450)
++.+|+|+| +. ...|.++++.+.....+. +|++||+++.|.. +.+-+..+.+.-...+-.++++.
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~-vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~ 80 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDF-VVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVL 80 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCE-EEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEec
Confidence 789999999 21 355666676664333444 9999999998873 22333333332222335799999
Q ss_pred CCCccccc
Q 013060 183 GNHESKYC 190 (450)
Q Consensus 183 GNHE~~~~ 190 (450)
||||....
T Consensus 81 GNHD~~~~ 88 (267)
T cd07396 81 GNHDLYNP 88 (267)
T ss_pred Cccccccc
Confidence 99998643
No 59
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.53 E-value=0.00025 Score=65.14 Aligned_cols=41 Identities=32% Similarity=0.344 Sum_probs=30.1
Q ss_pred cceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccccc
Q 013060 145 CFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYC 190 (450)
Q Consensus 145 ~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~ 190 (450)
+.+|++||++++|..+.. +.++.++ +..+++++||||....
T Consensus 44 d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v~GNHD~~~~ 84 (168)
T cd07390 44 DTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLIKGNHDSSLE 84 (168)
T ss_pred CEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEEeCCCCchhh
Confidence 459999999999986644 4444333 3569999999998543
No 60
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.50 E-value=0.0002 Score=73.48 Aligned_cols=73 Identities=22% Similarity=0.288 Sum_probs=47.3
Q ss_pred CcEEEEccCC-C-----------CHHHHHHHHHhcCCCCCCcceEeeCcccCCC-CChHHHHHHHHH--hh--hhCCCcE
Q 013060 116 SRVVVVGDVH-G-----------QLHDVLFLLRDAGFPSKNCFFVFNGDYVDRG-AWGLETFLLLLA--WK--VFLPHRV 178 (450)
Q Consensus 116 ~~i~ViGDIH-G-----------~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG-~~s~evl~lL~~--Lk--~~~p~~v 178 (450)
||++.++|+| | +...|.++++.+.-...+. +|+.||++|+. +.+.+++.++.. ++ ...+-.|
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~-VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v 79 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITT-WIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITL 79 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCE-EEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeE
Confidence 6899999999 4 2344555555544333444 99999999985 445555444432 11 1234579
Q ss_pred EEecCCCcccc
Q 013060 179 YLLRGNHESKY 189 (450)
Q Consensus 179 ~lLRGNHE~~~ 189 (450)
++|.||||...
T Consensus 80 ~~I~GNHD~~~ 90 (340)
T PHA02546 80 HVLVGNHDMYY 90 (340)
T ss_pred EEEccCCCccc
Confidence 99999999853
No 61
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.39 E-value=0.00034 Score=66.12 Aligned_cols=68 Identities=28% Similarity=0.339 Sum_probs=36.9
Q ss_pred EEEccCC---CCHHH---HHHHHHhcCCCCCCcceEeeCcccCCC-------CCh-HHHHHHHHHhhhhCCCcEEEecCC
Q 013060 119 VVVGDVH---GQLHD---VLFLLRDAGFPSKNCFFVFNGDYVDRG-------AWG-LETFLLLLAWKVFLPHRVYLLRGN 184 (450)
Q Consensus 119 ~ViGDIH---G~~~d---L~~il~~~g~~~~~~~~vfLGDyVDRG-------~~s-~evl~lL~~Lk~~~p~~v~lLRGN 184 (450)
++|+|+| +...+ +..++........ ..+|++||++|-- ... .+.+..++.+. .....|+.+.||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~-~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~v~GN 78 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEA-DALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-DRGTRVYYVPGN 78 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCC-CEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-HCCCeEEEECCC
Confidence 4899999 22212 2222222110123 3499999999841 111 22223333332 345689999999
Q ss_pred Cccc
Q 013060 185 HESK 188 (450)
Q Consensus 185 HE~~ 188 (450)
||..
T Consensus 79 HD~~ 82 (217)
T cd07398 79 HDFL 82 (217)
T ss_pred chHH
Confidence 9985
No 62
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.37 E-value=0.00061 Score=67.50 Aligned_cols=73 Identities=18% Similarity=0.176 Sum_probs=46.8
Q ss_pred CCCcEEEEccCC-C-----------CHHHHHHHHHhcC-CCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEE
Q 013060 114 QDSRVVVVGDVH-G-----------QLHDVLFLLRDAG-FPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYL 180 (450)
Q Consensus 114 ~~~~i~ViGDIH-G-----------~~~dL~~il~~~g-~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~l 180 (450)
..++++.|+|+| . ....|.++++.+. ....-+.+|+.||+++.|. .+-...+...-...+..+++
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~ 90 (275)
T PRK11148 13 ARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVW 90 (275)
T ss_pred CCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEE
Confidence 457899999999 1 1356777776653 2222234999999999874 22232222221233457999
Q ss_pred ecCCCccc
Q 013060 181 LRGNHESK 188 (450)
Q Consensus 181 LRGNHE~~ 188 (450)
+.||||..
T Consensus 91 v~GNHD~~ 98 (275)
T PRK11148 91 LPGNHDFQ 98 (275)
T ss_pred eCCCCCCh
Confidence 99999973
No 63
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.36 E-value=0.00073 Score=72.92 Aligned_cols=116 Identities=19% Similarity=0.256 Sum_probs=61.1
Q ss_pred CCCcEEEEccCC-CCH----HHHHHHHHhc-CCC-------CCCcceEeeCcccCC-CCCh---------------HHHH
Q 013060 114 QDSRVVVVGDVH-GQL----HDVLFLLRDA-GFP-------SKNCFFVFNGDYVDR-GAWG---------------LETF 164 (450)
Q Consensus 114 ~~~~i~ViGDIH-G~~----~dL~~il~~~-g~~-------~~~~~~vfLGDyVDR-G~~s---------------~evl 164 (450)
...++++|+|+| |.. ..+..+++.+ |.. ..-..+|++||+||. |.+. .++.
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~ 321 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAA 321 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHH
Confidence 346799999999 653 2233343332 221 112359999999995 3221 1344
Q ss_pred HHHHHhhhhCCCcEEEecCCCcccccccc-ccchHHHHHHhcCcchhhhhhhhhhhcCCCceeeec-CcEEeeccCC
Q 013060 165 LLLLAWKVFLPHRVYLLRGNHESKYCTSV-YGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIG-KHVFTAHGGL 239 (450)
Q Consensus 165 ~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~-~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~-~~i~~vHGGi 239 (450)
.+|..+. ..-.|++++||||....... ..+...+...+.. .-..++.. |....++ .+++++||-.
T Consensus 322 ~~L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~-------~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 322 EYLKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPE-------HNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHHhhh--cCCeEEEecCCCcchhhccCCCCccHHHHHhcCc-------CCeEEecC-CeEEEECCEEEEEECCCC
Confidence 4444442 23479999999998643221 1222222111111 01233333 5444444 4788899874
No 64
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.34 E-value=0.0071 Score=58.20 Aligned_cols=179 Identities=21% Similarity=0.211 Sum_probs=99.9
Q ss_pred CCcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCccc--CCCCChHHHHH-HHHHhhhhCCCcEEEecCCCcccccc
Q 013060 115 DSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYV--DRGAWGLETFL-LLLAWKVFLPHRVYLLRGNHESKYCT 191 (450)
Q Consensus 115 ~~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyV--DRG~~s~evl~-lL~~Lk~~~p~~v~lLRGNHE~~~~~ 191 (450)
.|++..+.|+||.++.+.+++..++-...+- +|+.||+. +.|+.-.-.-. .+..++ ...-.|+.+.||.|...+-
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~-lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~ 80 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADL-LVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEVI 80 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCE-EEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHHH
Confidence 4799999999999999999998876555555 89999999 87764322221 133333 2446899999998886431
Q ss_pred ccccchHHHHHHhcCcchhhhhhhhhhhcCCCceeeecCcEEeeccCCCCccCCCCCCCcCCCCCCccccCCCCCCCCCC
Q 013060 192 SVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLG 271 (450)
Q Consensus 192 ~~~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii~~~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 271 (450)
.....++. .+. +-...+++--||-=||..+..--++ .--
T Consensus 81 -------~~l~~~~~---~v~----------~~v~~i~~~~~~G~Ggsn~tp~nt~---------------------~e~ 119 (226)
T COG2129 81 -------DVLKNAGV---NVH----------GRVVEIGGYGFVGFGGSNPTPFNTP---------------------REF 119 (226)
T ss_pred -------HHHHhccc---ccc----------cceEEecCcEEEEecccCCCCCCCc---------------------ccc
Confidence 11111211 111 1123345556666677765431111 112
Q ss_pred CHHHHHHhhhccCCCCCCCCCCCCCcCCcccccCCCCcCCCCccCCCCCeeeeChhhHHHHHHHcCCeEEEEecc
Q 013060 272 SFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHE 346 (450)
Q Consensus 272 sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~~fG~~~~~~FL~~n~l~~IIRgHe 346 (450)
+-++|...-+........ . ..++-.+.-+....-.. ..| ...-|..++.++.+..+-.+.|+||-
T Consensus 120 ~E~~I~s~l~~~v~~~~~---~-----~~Il~~HaPP~gt~~d~-~~g-~~hvGS~~vr~~ieefqP~l~i~GHI 184 (226)
T COG2129 120 SEDEIYSKLKSLVKKADN---P-----VNILLTHAPPYGTLLDT-PSG-YVHVGSKAVRKLIEEFQPLLGLHGHI 184 (226)
T ss_pred CHHHHHHHHHHHHhcccC---c-----ceEEEecCCCCCccccC-CCC-ccccchHHHHHHHHHhCCceEEEeee
Confidence 345555444433221100 0 00332222211111111 122 24468899999999999999999984
No 65
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.34 E-value=0.00058 Score=65.56 Aligned_cols=67 Identities=30% Similarity=0.425 Sum_probs=43.7
Q ss_pred cEEEEccCCCC------------HHHHHHHHHhcCCC--CCCcceEeeCcccCCCCCh-HH-HHHHHHHhhhhCCCcEEE
Q 013060 117 RVVVVGDVHGQ------------LHDVLFLLRDAGFP--SKNCFFVFNGDYVDRGAWG-LE-TFLLLLAWKVFLPHRVYL 180 (450)
Q Consensus 117 ~i~ViGDIHG~------------~~dL~~il~~~g~~--~~~~~~vfLGDyVDRG~~s-~e-vl~lL~~Lk~~~p~~v~l 180 (450)
|+++++|+|=. ...|.++++.+.-. ..+ .+|++||+++.|... .+ ++..+.. .+-.+++
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d-~vi~~GDl~~~~~~~~~~~~~~~l~~----~~~p~~~ 75 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPD-LVLVTGDLTDDGSPESYERLRELLAA----LPIPVYL 75 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCC-EEEECccCCCCCCHHHHHHHHHHHhh----cCCCEEE
Confidence 58899999933 34566677654332 334 499999999987532 22 2222222 2456999
Q ss_pred ecCCCccc
Q 013060 181 LRGNHESK 188 (450)
Q Consensus 181 LRGNHE~~ 188 (450)
++||||..
T Consensus 76 v~GNHD~~ 83 (240)
T cd07402 76 LPGNHDDR 83 (240)
T ss_pred eCCCCCCH
Confidence 99999974
No 66
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.25 E-value=0.00061 Score=71.62 Aligned_cols=72 Identities=22% Similarity=0.324 Sum_probs=45.2
Q ss_pred CcEEEEccCC-CC-H------HH----HHHHHHhcCCCCCCcceEeeCcccCCCCChHHHH----HHHHHhhhhCCCcEE
Q 013060 116 SRVVVVGDVH-GQ-L------HD----VLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETF----LLLLAWKVFLPHRVY 179 (450)
Q Consensus 116 ~~i~ViGDIH-G~-~------~d----L~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl----~lL~~Lk~~~p~~v~ 179 (450)
|+++.++|+| |. + .+ |.++++.+.-...+. +|+.||++|++..+.+.. .++..|+- .+-.++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~-viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~ 78 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDA-IIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLV 78 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCE-EEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEE
Confidence 5899999999 42 1 11 233444333334444 999999999986554332 23333432 234699
Q ss_pred EecCCCcccc
Q 013060 180 LLRGNHESKY 189 (450)
Q Consensus 180 lLRGNHE~~~ 189 (450)
++.||||...
T Consensus 79 ~I~GNHD~~~ 88 (407)
T PRK10966 79 VLAGNHDSVA 88 (407)
T ss_pred EEcCCCCChh
Confidence 9999999853
No 67
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.21 E-value=0.00066 Score=64.09 Aligned_cols=73 Identities=22% Similarity=0.257 Sum_probs=46.7
Q ss_pred cEEEEccCC-CCH--------------HHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHh-hhh--CCCcE
Q 013060 117 RVVVVGDVH-GQL--------------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAW-KVF--LPHRV 178 (450)
Q Consensus 117 ~i~ViGDIH-G~~--------------~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~L-k~~--~p~~v 178 (450)
+++.++|+| |.. ..|.++++.+.....+. +|+.||++|....+.+.+..+... +.. ....+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDF-VLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCE-EEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCE
Confidence 578999999 322 23555665554434444 999999999876555443333322 111 24579
Q ss_pred EEecCCCccccc
Q 013060 179 YLLRGNHESKYC 190 (450)
Q Consensus 179 ~lLRGNHE~~~~ 190 (450)
+++.||||....
T Consensus 80 ~~~~GNHD~~~~ 91 (223)
T cd00840 80 FIIAGNHDSPSR 91 (223)
T ss_pred EEecCCCCCccc
Confidence 999999998654
No 68
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.09 E-value=0.0017 Score=61.13 Aligned_cols=70 Identities=11% Similarity=0.075 Sum_probs=43.7
Q ss_pred CcEEEEccCCCCHH-----------HHHHHHH-hcCCCCCCcceEeeCcccCCCCC---hHHHHHHHHHhhhhCCCcEEE
Q 013060 116 SRVVVVGDVHGQLH-----------DVLFLLR-DAGFPSKNCFFVFNGDYVDRGAW---GLETFLLLLAWKVFLPHRVYL 180 (450)
Q Consensus 116 ~~i~ViGDIHG~~~-----------dL~~il~-~~g~~~~~~~~vfLGDyVDRG~~---s~evl~lL~~Lk~~~p~~v~l 180 (450)
.++.+++|+|-... ...+.++ .+.....+ .+|++||+++.+.. +.+.+..++.......-.+++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~ 81 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPD-LVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAA 81 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCC-EEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEE
Confidence 48999999995221 1122222 22222333 49999999997765 355665555433333457899
Q ss_pred ecCCCc
Q 013060 181 LRGNHE 186 (450)
Q Consensus 181 LRGNHE 186 (450)
+.||||
T Consensus 82 ~~GNHD 87 (199)
T cd07383 82 TFGNHD 87 (199)
T ss_pred ECccCC
Confidence 999999
No 69
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=97.07 E-value=0.0013 Score=55.36 Aligned_cols=47 Identities=23% Similarity=0.336 Sum_probs=36.6
Q ss_pred CCCCCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeeEe
Q 013060 53 DGMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVI 109 (450)
Q Consensus 53 ~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~l~~i 109 (450)
+.++|.+||..|++.|+.+ ..||..++..|+.+|.++|+++|++++|
T Consensus 49 ~~~it~efv~~mie~FK~~----------K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 49 DEPITLEFVKAMIEWFKNQ----------KKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp TTB--HHHHHHHHHHHHCT--------------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCCCCHHHHHHHHHHHHhC----------CCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 3569999999999999854 3689999999999999999999999986
No 70
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.07 E-value=0.0016 Score=68.42 Aligned_cols=75 Identities=17% Similarity=0.216 Sum_probs=55.9
Q ss_pred CCCcEEEEccCCCC------------HHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhh--------
Q 013060 114 QDSRVVVVGDVHGQ------------LHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVF-------- 173 (450)
Q Consensus 114 ~~~~i~ViGDIHG~------------~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~-------- 173 (450)
+.++|++++|+|-- +..|.++++.+.-...+- +|+.||+.|+..-|.+++..++.+-.+
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~-VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~ 80 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDM-ILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPC 80 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCE-EEECCccCCCCCCCHHHHHHHHHHHHHhhccCCcc
Confidence 45799999999932 456777777775444454 999999999999998888665543221
Q ss_pred ----------------------------CCCcEEEecCCCcccc
Q 013060 174 ----------------------------LPHRVYLLRGNHESKY 189 (450)
Q Consensus 174 ----------------------------~p~~v~lLRGNHE~~~ 189 (450)
..-.||+|-||||...
T Consensus 81 ~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 81 ELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred chhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1236999999999964
No 71
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.00 E-value=0.00091 Score=60.97 Aligned_cols=44 Identities=20% Similarity=0.295 Sum_probs=27.8
Q ss_pred ceEeeCcccCCCCChH-H----HHHHHHHhhhhC-CCcEEEecCCCcccc
Q 013060 146 FFVFNGDYVDRGAWGL-E----TFLLLLAWKVFL-PHRVYLLRGNHESKY 189 (450)
Q Consensus 146 ~~vfLGDyVDRG~~s~-e----vl~lL~~Lk~~~-p~~v~lLRGNHE~~~ 189 (450)
.+|++||++|.+.... + .+..+..+.... ...++++.||||...
T Consensus 41 ~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 41 VVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred EEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 4999999999876431 2 222222221111 346999999999853
No 72
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.90 E-value=0.0024 Score=61.86 Aligned_cols=68 Identities=22% Similarity=0.186 Sum_probs=40.9
Q ss_pred cEEEEccCC-CCHHHH----------------HHHHHhcCCCCCCcceEeeCcccCCCCCh---HHHHHHHHHhhhhCCC
Q 013060 117 RVVVVGDVH-GQLHDV----------------LFLLRDAGFPSKNCFFVFNGDYVDRGAWG---LETFLLLLAWKVFLPH 176 (450)
Q Consensus 117 ~i~ViGDIH-G~~~dL----------------~~il~~~g~~~~~~~~vfLGDyVDRG~~s---~evl~lL~~Lk~~~p~ 176 (450)
++.||+|+| |.-..+ .++.+.......+ .+|++||+++..... .++..++..+ ..
T Consensus 16 ~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d-~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 16 DKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIE-ALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred CeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCC-EEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 788999999 543322 2222222222234 499999999765542 2333334332 24
Q ss_pred cEEEecCCCcccc
Q 013060 177 RVYLLRGNHESKY 189 (450)
Q Consensus 177 ~v~lLRGNHE~~~ 189 (450)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999753
No 73
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.89 E-value=0.067 Score=52.86 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=20.8
Q ss_pred eChhhHHHHHHHcCCeEEEEecc
Q 013060 324 WGPDSTEEFLKKFSLKLIIRSHE 346 (450)
Q Consensus 324 fG~~~~~~FL~~n~l~~IIRgHe 346 (450)
-.++.++..|+..+-.+|.-||.
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhd 225 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDD 225 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCC
Confidence 46788999999999999999998
No 74
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=96.80 E-value=0.0026 Score=61.58 Aligned_cols=66 Identities=17% Similarity=0.180 Sum_probs=39.4
Q ss_pred EEEEccCCCC---------HH----HHH-HHHHhcC--CCCCCcceEeeCcccCCCCCh--HHHHHHHHHhhhhCCCcEE
Q 013060 118 VVVVGDVHGQ---------LH----DVL-FLLRDAG--FPSKNCFFVFNGDYVDRGAWG--LETFLLLLAWKVFLPHRVY 179 (450)
Q Consensus 118 i~ViGDIHG~---------~~----dL~-~il~~~g--~~~~~~~~vfLGDyVDRG~~s--~evl~lL~~Lk~~~p~~v~ 179 (450)
|++++|+|-. +. ++. ++.+.+. .+.. +.+|+.||+++++... .+.+.+|.++ +..++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~-D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~ 75 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPE-DIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKV 75 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCC-CEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeE
Confidence 5789999954 21 333 3333211 1233 4489999999887643 2333333332 34589
Q ss_pred EecCCCccc
Q 013060 180 LLRGNHESK 188 (450)
Q Consensus 180 lLRGNHE~~ 188 (450)
++.||||..
T Consensus 76 ~V~GNHD~~ 84 (232)
T cd07393 76 LLKGNHDYW 84 (232)
T ss_pred EEeCCcccc
Confidence 999999973
No 75
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=96.64 E-value=0.0062 Score=59.93 Aligned_cols=71 Identities=18% Similarity=0.199 Sum_probs=40.5
Q ss_pred EEEEccCCCCHH------HH-HHHHHhcCCCCCCcceEeeCcccCCCCCh--------H---HHHHHHHHhhhhCCCcEE
Q 013060 118 VVVVGDVHGQLH------DV-LFLLRDAGFPSKNCFFVFNGDYVDRGAWG--------L---ETFLLLLAWKVFLPHRVY 179 (450)
Q Consensus 118 i~ViGDIHG~~~------dL-~~il~~~g~~~~~~~~vfLGDyVDRG~~s--------~---evl~lL~~Lk~~~p~~v~ 179 (450)
++.++|+|-... .. ..+++.+.....+ .+|++||++|+.... . +.+..+..+....+..++
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd-~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPA-LVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWF 80 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCC-EEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEE
Confidence 568899995221 12 2233333333334 499999999986521 1 122222222222356799
Q ss_pred EecCCCcccc
Q 013060 180 LLRGNHESKY 189 (450)
Q Consensus 180 lLRGNHE~~~ 189 (450)
.++||||...
T Consensus 81 ~v~GNHD~~~ 90 (256)
T cd07401 81 DIRGNHDLFN 90 (256)
T ss_pred EeCCCCCcCC
Confidence 9999999953
No 76
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=96.63 E-value=0.0062 Score=59.49 Aligned_cols=73 Identities=25% Similarity=0.332 Sum_probs=49.9
Q ss_pred CcEEEEccCCCC------HHHHHHHHHhcCCCCCCcceEeeCcccCCCC-ChHHHHHHHHHhhhhCCCcEEEecCCCccc
Q 013060 116 SRVVVVGDVHGQ------LHDVLFLLRDAGFPSKNCFFVFNGDYVDRGA-WGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 116 ~~i~ViGDIHG~------~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~-~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
++++.|+|+|-- ...+..+++.......+- +|+.||+.++|. ...+-+..++. +...+..+++++||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~-~v~tGDl~~~~~~~~~~~~~~~l~-~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDL-LVVTGDLTNDGEPEEYRRLKELLA-RLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCE-EEEccCcCCCCCHHHHHHHHHHHh-hccCCCceEeeCCCCcCC
Confidence 478999999976 334555666666555544 999999999963 22333322222 235677899999999997
Q ss_pred cc
Q 013060 189 YC 190 (450)
Q Consensus 189 ~~ 190 (450)
..
T Consensus 79 ~~ 80 (301)
T COG1409 79 VV 80 (301)
T ss_pred ch
Confidence 54
No 77
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=96.52 E-value=0.0079 Score=58.89 Aligned_cols=73 Identities=16% Similarity=0.009 Sum_probs=43.7
Q ss_pred CcEEEEccCCCCH----------------HHHHHHHHhcCCC-CCCcceEeeCcccCCCCChH---HHHHHHHH-hhh-h
Q 013060 116 SRVVVVGDVHGQL----------------HDVLFLLRDAGFP-SKNCFFVFNGDYVDRGAWGL---ETFLLLLA-WKV-F 173 (450)
Q Consensus 116 ~~i~ViGDIHG~~----------------~dL~~il~~~g~~-~~~~~~vfLGDyVDRG~~s~---evl~lL~~-Lk~-~ 173 (450)
-++++++|+|-.. ..|.++++.+... +.-+.+|++||+++.|...- +....+.. ++. .
T Consensus 5 ~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (262)
T cd07395 5 FYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLD 84 (262)
T ss_pred EEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhcc
Confidence 3788999999653 1345555554322 22234999999999887541 11222211 221 1
Q ss_pred CCCcEEEecCCCccc
Q 013060 174 LPHRVYLLRGNHESK 188 (450)
Q Consensus 174 ~p~~v~lLRGNHE~~ 188 (450)
.+-.++.+.||||..
T Consensus 85 ~~vp~~~i~GNHD~~ 99 (262)
T cd07395 85 PDIPLVCVCGNHDVG 99 (262)
T ss_pred CCCcEEEeCCCCCCC
Confidence 234699999999984
No 78
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.49 E-value=0.0091 Score=57.93 Aligned_cols=100 Identities=26% Similarity=0.307 Sum_probs=57.1
Q ss_pred EEccCCCC------HHHHHHHHHhcCCCCCCcceEeeCcccC--CCCC-----hHHHHHHHHHhhhhCCCcEEEecCCCc
Q 013060 120 VVGDVHGQ------LHDVLFLLRDAGFPSKNCFFVFNGDYVD--RGAW-----GLETFLLLLAWKVFLPHRVYLLRGNHE 186 (450)
Q Consensus 120 ViGDIHG~------~~dL~~il~~~g~~~~~~~~vfLGDyVD--RG~~-----s~evl~lL~~Lk~~~p~~v~lLRGNHE 186 (450)
.|+|+|=. -+.|++.|+... +. .+.+++|||++| .|.. --+|...|..+ .+...++|++.||||
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a-~~-ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~D 78 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEA-AQ-ADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHD 78 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhcc-cc-CcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchH
Confidence 68899933 233444555432 22 344999999986 2333 24555555544 245678999999999
Q ss_pred cccccccccchHHHHHHhcCcchhhhhhhhhhhcCCCceeee---cCcEEeeccCCCC
Q 013060 187 SKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLI---GKHVFTAHGGLFR 241 (450)
Q Consensus 187 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~f~~LPlaaii---~~~i~~vHGGi~~ 241 (450)
.. +.. -.....| -+.-+|-...+ +.+++++||....
T Consensus 79 fl-l~~------~f~~~~g------------~~~l~~~~~~~~l~g~~~Ll~HGD~f~ 117 (237)
T COG2908 79 FL-LGK------RFAQEAG------------GMTLLPDPIVLDLYGKRILLAHGDTFC 117 (237)
T ss_pred HH-HHH------HHHhhcC------------ceEEcCcceeeeecCcEEEEEeCCccc
Confidence 53 211 0111111 12234444333 6799999998754
No 79
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.45 E-value=0.0032 Score=62.42 Aligned_cols=70 Identities=17% Similarity=0.247 Sum_probs=40.7
Q ss_pred CcEEEEccCCC----CHHHHHHHHHhcCCCCCCcceEeeCcccCCCCCh----HHH-HHHHHHhhhhCCCcEEEecCCCc
Q 013060 116 SRVVVVGDVHG----QLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG----LET-FLLLLAWKVFLPHRVYLLRGNHE 186 (450)
Q Consensus 116 ~~i~ViGDIHG----~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s----~ev-l~lL~~Lk~~~p~~v~lLRGNHE 186 (450)
-+++|+||.|. ....+.++.+. ....+ .+|++||+++-+... .+. +..+..+.. .-.++.++||||
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d-~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD 79 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYD-AILHVGDLAYADGYNNGSRWDTFMRQIEPLAS--YVPYMVTPGNHE 79 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCcc-EEEEcCchhhhcCCccchhHHHHHHHHHHHHh--cCCcEEcCcccc
Confidence 48999999995 23333333333 12233 489999999544321 222 222222222 235899999999
Q ss_pred cccc
Q 013060 187 SKYC 190 (450)
Q Consensus 187 ~~~~ 190 (450)
....
T Consensus 80 ~~~~ 83 (294)
T cd00839 80 ADYN 83 (294)
T ss_pred cccC
Confidence 8643
No 80
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.41 E-value=0.0054 Score=59.56 Aligned_cols=67 Identities=21% Similarity=0.310 Sum_probs=45.1
Q ss_pred cEEEEccCCCCH---------HHHHHHHHhcCCCCCCcceEeeCcccCCCCChH-----HHHHHHHHhhhhCCCcEEEec
Q 013060 117 RVVVVGDVHGQL---------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL-----ETFLLLLAWKVFLPHRVYLLR 182 (450)
Q Consensus 117 ~i~ViGDIHG~~---------~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~-----evl~lL~~Lk~~~p~~v~lLR 182 (450)
+|+.++|+||.+ ..+..++++..-...+..+|..||+++....+. .++..|.++ +..+ +..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d~-~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYDA-VTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCCE-Eee
Confidence 689999999887 456667766554444555788999999887653 455544443 2233 445
Q ss_pred CCCccc
Q 013060 183 GNHESK 188 (450)
Q Consensus 183 GNHE~~ 188 (450)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999973
No 81
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.40 E-value=0.017 Score=52.68 Aligned_cols=69 Identities=19% Similarity=0.128 Sum_probs=40.4
Q ss_pred cEEEEccCCC------------CHHHHHH-HHHhc-CCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEec
Q 013060 117 RVVVVGDVHG------------QLHDVLF-LLRDA-GFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLR 182 (450)
Q Consensus 117 ~i~ViGDIHG------------~~~dL~~-il~~~-g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLR 182 (450)
.++.+||+|= +.+.... |+..+ ....+++.+.+|||+.-.-..-.+...++-+ -++++++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~Iler----LnGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILER----LNGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHH----cCCcEEEee
Confidence 4788999982 2222222 22211 1223345599999998544333333333333 368899999
Q ss_pred CCCcccc
Q 013060 183 GNHESKY 189 (450)
Q Consensus 183 GNHE~~~ 189 (450)
||||.--
T Consensus 81 GNhDk~~ 87 (186)
T COG4186 81 GNHDKCH 87 (186)
T ss_pred CCCCCCc
Confidence 9999853
No 82
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.34 E-value=0.0076 Score=62.75 Aligned_cols=74 Identities=22% Similarity=0.158 Sum_probs=50.7
Q ss_pred CcEEEEccCCCC-------------HHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhh-C--CCcEE
Q 013060 116 SRVVVVGDVHGQ-------------LHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVF-L--PHRVY 179 (450)
Q Consensus 116 ~~i~ViGDIHG~-------------~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~-~--p~~v~ 179 (450)
||+..++|+|=- +.+|..+++.+.-...+ .+|+-||+.|+..-|.+++..+...-.+ . .-.||
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD-~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~ 79 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVD-FVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVV 79 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCC-EEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEE
Confidence 588999999933 23444455544333334 4999999999998888887766543222 2 13699
Q ss_pred EecCCCccccc
Q 013060 180 LLRGNHESKYC 190 (450)
Q Consensus 180 lLRGNHE~~~~ 190 (450)
+|.||||...-
T Consensus 80 ~I~GNHD~~~~ 90 (390)
T COG0420 80 VIAGNHDSPSR 90 (390)
T ss_pred EecCCCCchhc
Confidence 99999999753
No 83
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.23 E-value=0.01 Score=59.59 Aligned_cols=74 Identities=28% Similarity=0.341 Sum_probs=48.9
Q ss_pred CCCcEEEEccCCCCHHH--HHHHHHhcCCCCCCcceEeeCcccCC-CCChH-HHHHHHHHhhhhCCCcEEEecCCCcccc
Q 013060 114 QDSRVVVVGDVHGQLHD--VLFLLRDAGFPSKNCFFVFNGDYVDR-GAWGL-ETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (450)
Q Consensus 114 ~~~~i~ViGDIHG~~~d--L~~il~~~g~~~~~~~~vfLGDyVDR-G~~s~-evl~lL~~Lk~~~p~~v~lLRGNHE~~~ 189 (450)
.+.+|+-++|+|-.... ..+.+........ +.+++.|||+|+ .+... .++..|..| +.|-.+|++-||||...
T Consensus 43 ~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~-DlivltGD~~~~~~~~~~~~~~~~L~~L--~~~~gv~av~GNHd~~~ 119 (284)
T COG1408 43 QGLKIVQLSDLHSLPFREEKLALLIAIANELP-DLIVLTGDYVDGDRPPGVAALALFLAKL--KAPLGVFAVLGNHDYGV 119 (284)
T ss_pred CCeEEEEeehhhhchhhHHHHHHHHHHHhcCC-CEEEEEeeeecCCCCCCHHHHHHHHHhh--hccCCEEEEeccccccc
Confidence 34579999999977655 2222333222222 559999999996 55544 444555554 45678999999998865
Q ss_pred c
Q 013060 190 C 190 (450)
Q Consensus 190 ~ 190 (450)
-
T Consensus 120 ~ 120 (284)
T COG1408 120 D 120 (284)
T ss_pred c
Confidence 4
No 84
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.22 E-value=0.01 Score=53.91 Aligned_cols=67 Identities=21% Similarity=0.229 Sum_probs=46.9
Q ss_pred EEEccCCCCHHHHHHHHHhcC-CCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCc
Q 013060 119 VVVGDVHGQLHDVLFLLRDAG-FPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHE 186 (450)
Q Consensus 119 ~ViGDIHG~~~dL~~il~~~g-~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE 186 (450)
.|+||+||+++.+..-++... ....=+.+|++||+..-....-+.-.++ .=....|--.|++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~-~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYK-DGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHh-cCCccCCCCEEEECCCCC
Confidence 489999999999987776532 1112234899999987655553433333 334567788999999998
No 85
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.09 E-value=0.018 Score=55.92 Aligned_cols=69 Identities=22% Similarity=0.284 Sum_probs=38.6
Q ss_pred EEEccCC--CCH---HHHHHHHHhc-CCCC---CCcceEeeCcccCCCCC---------------hH-HHHHHHHHhhhh
Q 013060 119 VVVGDVH--GQL---HDVLFLLRDA-GFPS---KNCFFVFNGDYVDRGAW---------------GL-ETFLLLLAWKVF 173 (450)
Q Consensus 119 ~ViGDIH--G~~---~dL~~il~~~-g~~~---~~~~~vfLGDyVDRG~~---------------s~-evl~lL~~Lk~~ 173 (450)
++|+|+| +.. ..+..+++.. +... .-+.+|++||++|+... .. ++..+|..|.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 6899999 332 2223333332 2211 12459999999997310 01 1223333332
Q ss_pred CCCcEEEecCCCcccc
Q 013060 174 LPHRVYLLRGNHESKY 189 (450)
Q Consensus 174 ~p~~v~lLRGNHE~~~ 189 (450)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2357999999999853
No 86
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=95.89 E-value=0.015 Score=53.90 Aligned_cols=44 Identities=27% Similarity=0.359 Sum_probs=28.3
Q ss_pred ceEeeCcccCCCCCh--HH---HHHHHHHhhhh-C----CCcEEEecCCCcccc
Q 013060 146 FFVFNGDYVDRGAWG--LE---TFLLLLAWKVF-L----PHRVYLLRGNHESKY 189 (450)
Q Consensus 146 ~~vfLGDyVDRG~~s--~e---vl~lL~~Lk~~-~----p~~v~lLRGNHE~~~ 189 (450)
.+||+||++|.+... .+ .+..+..+... . ...++++.||||...
T Consensus 48 ~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 48 VVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred EEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 499999999988743 22 23333232111 1 356999999999964
No 87
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=95.82 E-value=0.014 Score=55.38 Aligned_cols=43 Identities=19% Similarity=0.407 Sum_probs=31.3
Q ss_pred ceEeeCcccCCCCCh--HHHHHHHHHhhhhCC----CcEEEecCCCccc
Q 013060 146 FFVFNGDYVDRGAWG--LETFLLLLAWKVFLP----HRVYLLRGNHESK 188 (450)
Q Consensus 146 ~~vfLGDyVDRG~~s--~evl~lL~~Lk~~~p----~~v~lLRGNHE~~ 188 (450)
.+||+||++|.|+.+ .+....+..++-.++ ..++.|.||||.-
T Consensus 45 ~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 45 IVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred EEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 399999999999964 346665655543322 4689999999975
No 88
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=95.66 E-value=0.033 Score=58.19 Aligned_cols=82 Identities=23% Similarity=0.391 Sum_probs=52.7
Q ss_pred CCCcEEEEccCC--C---------------CHHHHHHHHHhcCCCCCCcceEeeCcccCCCCCh--HHHHHHHHHhhhhC
Q 013060 114 QDSRVVVVGDVH--G---------------QLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG--LETFLLLLAWKVFL 174 (450)
Q Consensus 114 ~~~~i~ViGDIH--G---------------~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s--~evl~lL~~Lk~~~ 174 (450)
+..++..|+|-| | +=.-|.+.++...+.-.-+..+||||++|.|.+. -|=-.....+|-.+
T Consensus 47 n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf 126 (410)
T KOG3662|consen 47 NSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIF 126 (410)
T ss_pred CceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhh
Confidence 445889999976 3 1123445565555444444589999999999865 33334444555445
Q ss_pred CC----cEEEecCCCccccccccccchHHHHH
Q 013060 175 PH----RVYLLRGNHESKYCTSVYGFEKEVMA 202 (450)
Q Consensus 175 p~----~v~lLRGNHE~~~~~~~~gf~~e~~~ 202 (450)
+. .+..+.||||- ||..|...
T Consensus 127 ~~k~~~~~~~i~GNhDI-------Gf~~~~~~ 151 (410)
T KOG3662|consen 127 GRKGNIKVIYIAGNHDI-------GFGNELIP 151 (410)
T ss_pred CCCCCCeeEEeCCcccc-------ccccccch
Confidence 53 68999999998 56555443
No 89
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=95.37 E-value=0.032 Score=54.01 Aligned_cols=73 Identities=16% Similarity=0.169 Sum_probs=42.6
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHH-------------------------HHHHHh
Q 013060 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETF-------------------------LLLLAW 170 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl-------------------------~lL~~L 170 (450)
.+|.+++|.||+++.|.++.+.+.-...+. +||+||++-....+.|-. .-++..
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~-~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDA-VVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SE-EEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCE-EEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 379999999999999999887654334455 999999986554443333 233322
Q ss_pred hhhCCCcEEEecCCCcccc
Q 013060 171 KVFLPHRVYLLRGNHESKY 189 (450)
Q Consensus 171 k~~~p~~v~lLRGNHE~~~ 189 (450)
--..+-.+++|+||||...
T Consensus 85 L~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 85 LGELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHCC-SEEEEE--TTS-SH
T ss_pred HHhcCCcEEEecCCCCchH
Confidence 2235568999999999963
No 90
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.27 E-value=0.032 Score=54.29 Aligned_cols=71 Identities=23% Similarity=0.191 Sum_probs=42.9
Q ss_pred CcEEEEccCCCCHH----------------HHHHHHHh-cCCCCCCcceEeeCcccCCCCC-----hHHHHHHHHHhhhh
Q 013060 116 SRVVVVGDVHGQLH----------------DVLFLLRD-AGFPSKNCFFVFNGDYVDRGAW-----GLETFLLLLAWKVF 173 (450)
Q Consensus 116 ~~i~ViGDIHG~~~----------------dL~~il~~-~g~~~~~~~~vfLGDyVDRG~~-----s~evl~lL~~Lk~~ 173 (450)
.+..||.|+|=-+. .+.+.+.. ...-..+ .+|.|||+-.-.+. ..++..++..++..
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~-~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPK-RLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCC-EEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 48999999994333 22223321 1111233 49999999754333 35555555444332
Q ss_pred CCCcEEEecCCCccccc
Q 013060 174 LPHRVYLLRGNHESKYC 190 (450)
Q Consensus 174 ~p~~v~lLRGNHE~~~~ 190 (450)
.+++++||||...-
T Consensus 99 ---evi~i~GNHD~~i~ 112 (235)
T COG1407 99 ---EVIIIRGNHDNGIE 112 (235)
T ss_pred ---cEEEEeccCCCccc
Confidence 59999999999654
No 91
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.26 E-value=0.034 Score=52.70 Aligned_cols=66 Identities=17% Similarity=0.037 Sum_probs=41.5
Q ss_pred cCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHH-HHHHHHHhhhhC---------------------CCcEEE
Q 013060 123 DVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLE-TFLLLLAWKVFL---------------------PHRVYL 180 (450)
Q Consensus 123 DIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~e-vl~lL~~Lk~~~---------------------p~~v~l 180 (450)
|++|+=.-|.++++.+...-.-+.++||||++|.|--+-+ --.....++-.+ .-.+++
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 5567766777887765543333448999999999753322 223333332222 145799
Q ss_pred ecCCCccc
Q 013060 181 LRGNHESK 188 (450)
Q Consensus 181 LRGNHE~~ 188 (450)
|.||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999994
No 92
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=94.79 E-value=0.039 Score=54.64 Aligned_cols=66 Identities=26% Similarity=0.325 Sum_probs=39.4
Q ss_pred cEEEEccCCCCH----------------HHHHHHHHhcCCCCCCcceEeeCcccCCCCCh-----------HHHHHHHHH
Q 013060 117 RVVVVGDVHGQL----------------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----------LETFLLLLA 169 (450)
Q Consensus 117 ~i~ViGDIHG~~----------------~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s-----------~evl~lL~~ 169 (450)
+|+.++|+||++ ..+..++++......+..+|..||+++..+.+ ..++..+-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 578899999997 33555666554333344233479999876522 224444444
Q ss_pred hhhhCCCcEEEecCCCcc
Q 013060 170 WKVFLPHRVYLLRGNHES 187 (450)
Q Consensus 170 Lk~~~p~~v~lLRGNHE~ 187 (450)
+. . . ++..||||.
T Consensus 82 ~g---~-d-~~~lGNHe~ 94 (277)
T cd07410 82 LG---Y-D-AGTLGNHEF 94 (277)
T ss_pred cC---C-C-EEeecccCc
Confidence 32 2 2 455699996
No 93
>PLN02533 probable purple acid phosphatase
Probab=94.47 E-value=0.052 Score=57.52 Aligned_cols=70 Identities=19% Similarity=0.148 Sum_probs=39.1
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChH--HH-HHHHHHhhhhCCCcEEEecCCCcccc
Q 013060 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL--ET-FLLLLAWKVFLPHRVYLLRGNHESKY 189 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~--ev-l~lL~~Lk~~~p~~v~lLRGNHE~~~ 189 (450)
-+++|+||+|-. ......++.+.....+ .+|++||+++-+.+.- +. ..++..+... --++.+.||||...
T Consensus 140 ~~f~v~GDlG~~-~~~~~tl~~i~~~~pD-~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~--~P~m~~~GNHE~~~ 212 (427)
T PLN02533 140 IKFAVSGDLGTS-EWTKSTLEHVSKWDYD-VFILPGDLSYANFYQPLWDTFGRLVQPLASQ--RPWMVTHGNHELEK 212 (427)
T ss_pred eEEEEEEeCCCC-cccHHHHHHHHhcCCC-EEEEcCccccccchHHHHHHHHHHhhhHhhc--CceEEeCccccccc
Confidence 379999999632 1112233333222334 4899999997654321 11 1222222222 34899999999863
No 94
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=93.81 E-value=0.12 Score=52.95 Aligned_cols=72 Identities=24% Similarity=0.445 Sum_probs=44.7
Q ss_pred CcEEEEccCCCCHHHHHH---HHHhcCCCCCCcceEeeCcccC-CCCC---h---------HHHHHHHHHhhhhCCCcEE
Q 013060 116 SRVVVVGDVHGQLHDVLF---LLRDAGFPSKNCFFVFNGDYVD-RGAW---G---------LETFLLLLAWKVFLPHRVY 179 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~---il~~~g~~~~~~~~vfLGDyVD-RG~~---s---------~evl~lL~~Lk~~~p~~v~ 179 (450)
|||.|-|=.||+++.+-+ ..++.|-.+-+ .++++||+=- |-.. + +..+.--+.=.+..|---+
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVD-LLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTI 79 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVD-LLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTI 79 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCcc-EEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEE
Confidence 589999999999998874 44555444444 4899999831 2111 1 1111111222233555568
Q ss_pred EecCCCccc
Q 013060 180 LLRGNHESK 188 (450)
Q Consensus 180 lLRGNHE~~ 188 (450)
+|-||||.+
T Consensus 80 FIGGNHEAs 88 (456)
T KOG2863|consen 80 FIGGNHEAS 88 (456)
T ss_pred EecCchHHH
Confidence 999999996
No 95
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=93.80 E-value=0.07 Score=53.44 Aligned_cols=67 Identities=28% Similarity=0.395 Sum_probs=44.0
Q ss_pred cEEEEccCCCCHHH--------------HHHHHHhcCCCCCCcceEeeCcccCCCCC-h-----HHHHHHHHHhhhhCCC
Q 013060 117 RVVVVGDVHGQLHD--------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAW-G-----LETFLLLLAWKVFLPH 176 (450)
Q Consensus 117 ~i~ViGDIHG~~~d--------------L~~il~~~g~~~~~~~~vfLGDyVDRG~~-s-----~evl~lL~~Lk~~~p~ 176 (450)
+|+.+.|+||++.. +..+++.......+..+|..||++...+. + ..++..+.++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 57889999998653 55666665544445568889999977654 2 245555555432
Q ss_pred cEEEecCCCccc
Q 013060 177 RVYLLRGNHESK 188 (450)
Q Consensus 177 ~v~lLRGNHE~~ 188 (450)
. ++..||||.-
T Consensus 78 D-a~t~GNHefd 88 (288)
T cd07412 78 D-ASAVGNHEFD 88 (288)
T ss_pred e-eeeecccccc
Confidence 3 3555999974
No 96
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=93.22 E-value=0.17 Score=49.92 Aligned_cols=66 Identities=21% Similarity=0.247 Sum_probs=38.4
Q ss_pred cEEEEccCCCCHHH----------------------HHHHHHhcCCC-CCCcceEeeCcccCCCCChH-----HHHHHHH
Q 013060 117 RVVVVGDVHGQLHD----------------------VLFLLRDAGFP-SKNCFFVFNGDYVDRGAWGL-----ETFLLLL 168 (450)
Q Consensus 117 ~i~ViGDIHG~~~d----------------------L~~il~~~g~~-~~~~~~vfLGDyVDRG~~s~-----evl~lL~ 168 (450)
.++.++|+||++.. +..++++.... ..+..+|..||+++..+.+. .++..+.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 46788999997533 34445554333 34443467999998766442 3344443
Q ss_pred HhhhhCCCcEEEecCCCccc
Q 013060 169 AWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 169 ~Lk~~~p~~v~lLRGNHE~~ 188 (450)
++ +-. ++. ||||..
T Consensus 82 ~~----g~d-a~~-GNHefd 95 (264)
T cd07411 82 AL----GVD-AMV-GHWEFT 95 (264)
T ss_pred hh----CCe-EEe-cccccc
Confidence 32 222 344 999963
No 97
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=93.21 E-value=0.18 Score=49.51 Aligned_cols=70 Identities=27% Similarity=0.305 Sum_probs=39.3
Q ss_pred cEEEEccCCCC--H--HHHHHHHH-hcCCCCCCcceEeeCccc-CCCCChH------HHHHHHHHhhhhCCCcEEEecCC
Q 013060 117 RVVVVGDVHGQ--L--HDVLFLLR-DAGFPSKNCFFVFNGDYV-DRGAWGL------ETFLLLLAWKVFLPHRVYLLRGN 184 (450)
Q Consensus 117 ~i~ViGDIHG~--~--~dL~~il~-~~g~~~~~~~~vfLGDyV-DRG~~s~------evl~lL~~Lk~~~p~~v~lLRGN 184 (450)
+++++||.=.. . ..+.+.+. .+.....+ .+|++||+| +-|..+. +.+..++.. ....-.++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~d-fvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPD-FILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCC-EEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCC
Confidence 68899998653 1 23443333 23223333 489999997 5553221 223323221 1123469999999
Q ss_pred Cccc
Q 013060 185 HESK 188 (450)
Q Consensus 185 HE~~ 188 (450)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9986
No 98
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=93.00 E-value=0.18 Score=49.44 Aligned_cols=66 Identities=18% Similarity=0.228 Sum_probs=41.0
Q ss_pred cEEEEccCCCCH----------HHHHHHHHhcCCCCCCcceEeeCcccCCCCCh-----HHHHHHHHHhhhhCCCcEEEe
Q 013060 117 RVVVVGDVHGQL----------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAWKVFLPHRVYLL 181 (450)
Q Consensus 117 ~i~ViGDIHG~~----------~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~Lk~~~p~~v~lL 181 (450)
+|+-++|+||++ ..+..++++..-. .+..+|..||+++..+.+ ..++..+-.+ .-.+ +.
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~-~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~~ 75 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL-DNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-VT 75 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhc-CCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-Ec
Confidence 678899999985 3455566655433 345688899999876543 2333333332 1234 45
Q ss_pred cCCCccc
Q 013060 182 RGNHESK 188 (450)
Q Consensus 182 RGNHE~~ 188 (450)
.||||..
T Consensus 76 ~GNHefd 82 (257)
T cd07408 76 PGNHEFD 82 (257)
T ss_pred ccccccc
Confidence 6999963
No 99
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=92.29 E-value=4.5 Score=43.29 Aligned_cols=77 Identities=22% Similarity=0.407 Sum_probs=42.9
Q ss_pred CCCcEEEEccCC-CCHHHHHH----HHHhcCCCC----CCcceEeeCcccCC-CCCh-----------HHHHHHHHHhhh
Q 013060 114 QDSRVVVVGDVH-GQLHDVLF----LLRDAGFPS----KNCFFVFNGDYVDR-GAWG-----------LETFLLLLAWKV 172 (450)
Q Consensus 114 ~~~~i~ViGDIH-G~~~dL~~----il~~~g~~~----~~~~~vfLGDyVDR-G~~s-----------~evl~lL~~Lk~ 172 (450)
+...++.++||| |...-+.. .++.++-+. .-.-++..||.||. |-++ .|-...+..+.-
T Consensus 224 e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~ 303 (481)
T COG1311 224 ERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLD 303 (481)
T ss_pred cceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHh
Confidence 334689999999 44433333 333333221 11335677899994 2222 223333333333
Q ss_pred hCCC--cEEEecCCCccccc
Q 013060 173 FLPH--RVYLLRGNHESKYC 190 (450)
Q Consensus 173 ~~p~--~v~lLRGNHE~~~~ 190 (450)
+-|. .|++.+|||+..-.
T Consensus 304 ~vp~~I~v~i~PGnhDa~r~ 323 (481)
T COG1311 304 QVPEHIKVFIMPGNHDAVRQ 323 (481)
T ss_pred hCCCCceEEEecCCCCcccc
Confidence 4454 58999999999654
No 100
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=91.79 E-value=0.32 Score=48.41 Aligned_cols=68 Identities=21% Similarity=0.223 Sum_probs=50.4
Q ss_pred CcEEEEccCCCC--HHHHHHHHHhcCCCCCCcceEeeCcccCCC-CChHHHHHHHHHhhhhCCCcEEEecCCCccc
Q 013060 116 SRVVVVGDVHGQ--LHDVLFLLRDAGFPSKNCFFVFNGDYVDRG-AWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 116 ~~i~ViGDIHG~--~~dL~~il~~~g~~~~~~~~vfLGDyVDRG-~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
|+|.++|||=|. ...|...|..+......+.+|.+||...-| .-+.++...|..+- -.++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~G----vDviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSG----VNYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcC----CCEEEc-cchhcc
Confidence 689999999999 566677776665444445477789999766 46788888887653 356666 999985
No 101
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=91.56 E-value=0.39 Score=47.82 Aligned_cols=67 Identities=19% Similarity=0.258 Sum_probs=39.8
Q ss_pred cEEEEccCCCCH---------------------HHHHHHHHhcCCCCCCcceEeeCcccCCCCCh-----HHHHHHHHHh
Q 013060 117 RVVVVGDVHGQL---------------------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAW 170 (450)
Q Consensus 117 ~i~ViGDIHG~~---------------------~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~L 170 (450)
+|+-++|+||++ ..+..+++.......+..++..||++...+.+ ..++..+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 578889999875 34445555554334445466689999876532 3333444333
Q ss_pred hhhCCCcEEEecCCCccc
Q 013060 171 KVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 171 k~~~p~~v~lLRGNHE~~ 188 (450)
. -.+. ..||||..
T Consensus 82 g----~D~~-~lGNHefd 94 (281)
T cd07409 82 G----YDAM-TLGNHEFD 94 (281)
T ss_pred C----CCEE-Eecccccc
Confidence 2 2344 44999974
No 102
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=90.92 E-value=0.023 Score=58.61 Aligned_cols=95 Identities=3% Similarity=-0.242 Sum_probs=73.4
Q ss_pred CCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccccccccccchHHHHHHhcCc-chhhhhhhhhhhcC
Q 013060 143 KNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDK-GKHAYRKCLGCFEG 221 (450)
Q Consensus 143 ~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~-~~~~~~~~~~~f~~ 221 (450)
.....|+++++++++.+.++.+.+-+..+..+-.+....++||+.. +++.+++....... ...++...++-+..
T Consensus 47 d~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~ 121 (476)
T KOG0918|consen 47 DYLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKP 121 (476)
T ss_pred cceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCcc
Confidence 3345899999999999999999999998888888899999999543 44554443333322 34567777888888
Q ss_pred CCceeeecCcEEeeccCCCCcc
Q 013060 222 LPLASLIGKHVFTAHGGLFRSV 243 (450)
Q Consensus 222 LPlaaii~~~i~~vHGGi~~~~ 243 (450)
++.+.+.. +++|.||+.+|..
T Consensus 122 ~l~k~i~~-~il~~~~l~~Pht 142 (476)
T KOG0918|consen 122 SLEKTIDP-DILEKTGLACPHT 142 (476)
T ss_pred ceeeeech-hhHhhcCCcCCcc
Confidence 88877766 9999999999865
No 103
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=90.27 E-value=20 Score=35.48 Aligned_cols=47 Identities=13% Similarity=0.149 Sum_probs=28.0
Q ss_pred ceEeeCcccCCCCC------------------hHHHHHHHHHhhhh--CCCcEEEecCCCccccccc
Q 013060 146 FFVFNGDYVDRGAW------------------GLETFLLLLAWKVF--LPHRVYLLRGNHESKYCTS 192 (450)
Q Consensus 146 ~~vfLGDyVDRG~~------------------s~evl~lL~~Lk~~--~p~~v~lLRGNHE~~~~~~ 192 (450)
++|+.||.|+.-.. ..+.+..+-.+-.+ .--.|.++.||||-.....
T Consensus 45 rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~l 111 (257)
T cd07387 45 RLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHSL 111 (257)
T ss_pred EEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccccC
Confidence 59999999986432 22223222222111 1236899999999976543
No 104
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=89.86 E-value=0.6 Score=43.79 Aligned_cols=45 Identities=24% Similarity=0.347 Sum_probs=32.8
Q ss_pred CCCcceEeeCccc--CCCCChHHHHHHHHHhhhhCCCcEEEecCCCccccc
Q 013060 142 SKNCFFVFNGDYV--DRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYC 190 (450)
Q Consensus 142 ~~~~~~vfLGDyV--DRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~ 190 (450)
..++.++.-||+- -|=+...+-+.+|-+| |..=+++|||||.+.-
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~ 88 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWS 88 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccc
Confidence 3445588889985 3555666667777654 7889999999999753
No 105
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=89.27 E-value=0.42 Score=52.39 Aligned_cols=41 Identities=27% Similarity=0.385 Sum_probs=36.3
Q ss_pred ceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCcccccc
Q 013060 146 FFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCT 191 (450)
Q Consensus 146 ~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~ 191 (450)
++-.+||+.||||.+--++..|+.. .+|=+--||||.-+|.
T Consensus 187 hLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWMG 227 (640)
T PF06874_consen 187 HLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWMG 227 (640)
T ss_pred heeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHHH
Confidence 3888999999999999999999864 5888999999998774
No 106
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=88.47 E-value=0.61 Score=55.55 Aligned_cols=67 Identities=19% Similarity=0.241 Sum_probs=42.1
Q ss_pred CcEEEEccCCCCH---HHHHHHHHhcCCCCCCcceEeeCcccCCCCCh-----HHHHHHHHHhhhhCCCcEEEecCCCcc
Q 013060 116 SRVVVVGDVHGQL---HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAWKVFLPHRVYLLRGNHES 187 (450)
Q Consensus 116 ~~i~ViGDIHG~~---~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~Lk~~~p~~v~lLRGNHE~ 187 (450)
.+|+.++|+||++ ..+..++++..-...+..++..||++++.+.+ ..++..+-++. --++..||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 4789999999985 44444555543333344344489999887654 24445444432 23668999997
No 107
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=88.37 E-value=0.87 Score=44.70 Aligned_cols=66 Identities=21% Similarity=0.209 Sum_probs=42.6
Q ss_pred cEEEEccCC----------CCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCCh-----HHHHHHHHHhhhhCCCcEEEe
Q 013060 117 RVVVVGDVH----------GQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAWKVFLPHRVYLL 181 (450)
Q Consensus 117 ~i~ViGDIH----------G~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~Lk~~~p~~v~lL 181 (450)
+|+-+.|+| |-+..+..++++..-...+..+|..||+++..+.+ ..++..+..+. --+..
T Consensus 2 ~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~ 76 (257)
T cd07406 2 TILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLAC 76 (257)
T ss_pred eEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEe
Confidence 345566666 44667777777665444555688999999876532 45555555442 23567
Q ss_pred cCCCcc
Q 013060 182 RGNHES 187 (450)
Q Consensus 182 RGNHE~ 187 (450)
.||||.
T Consensus 77 ~GNHef 82 (257)
T cd07406 77 FGNHEF 82 (257)
T ss_pred eccccc
Confidence 899996
No 108
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=87.83 E-value=1.8 Score=44.42 Aligned_cols=44 Identities=18% Similarity=0.137 Sum_probs=28.8
Q ss_pred cceEeeCcccCCCCCh---HHHHHHHHHhhhhCCCcEEEecCCCcccc
Q 013060 145 CFFVFNGDYVDRGAWG---LETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (450)
Q Consensus 145 ~~~vfLGDyVDRG~~s---~evl~lL~~Lk~~~p~~v~lLRGNHE~~~ 189 (450)
+.+||+||.|+. ... ..++....+-.+.+.=-...+.||||...
T Consensus 102 DlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 102 DLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred CEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEeccccccc
Confidence 349999999986 333 33444444444444446789999999863
No 109
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=85.96 E-value=1.4 Score=43.85 Aligned_cols=62 Identities=27% Similarity=0.262 Sum_probs=35.5
Q ss_pred HHHHHHHHhcCC--CCCCcceEeeCcccCCCCChH--H------HHHHHHHhhhhCC-CcEEEecCCCcccccc
Q 013060 129 HDVLFLLRDAGF--PSKNCFFVFNGDYVDRGAWGL--E------TFLLLLAWKVFLP-HRVYLLRGNHESKYCT 191 (450)
Q Consensus 129 ~dL~~il~~~g~--~~~~~~~vfLGDyVDRG~~s~--e------vl~lL~~Lk~~~p-~~v~lLRGNHE~~~~~ 191 (450)
..+..+++.+.. +..+ .+|+.||+|+.+.... + .-.+...++..+| -.|+.+.||||....+
T Consensus 53 ~l~~s~l~~i~~~~~~~d-fii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~ 125 (296)
T cd00842 53 RLVESALEAIKKNHPKPD-FILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVN 125 (296)
T ss_pred HHHHHHHHHHHHhCCCCC-EEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCccc
Confidence 344445544322 2333 4899999998876531 1 1122222333344 3699999999987543
No 110
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=84.57 E-value=1.1 Score=44.70 Aligned_cols=67 Identities=16% Similarity=0.107 Sum_probs=37.4
Q ss_pred cEEEEccCCCCHHH----------HHHHHHhcCCC----CCCcceEeeCcccCCCCCh-----HHHHHHHHHhhhhCCCc
Q 013060 117 RVVVVGDVHGQLHD----------VLFLLRDAGFP----SKNCFFVFNGDYVDRGAWG-----LETFLLLLAWKVFLPHR 177 (450)
Q Consensus 117 ~i~ViGDIHG~~~d----------L~~il~~~g~~----~~~~~~vfLGDyVDRG~~s-----~evl~lL~~Lk~~~p~~ 177 (450)
.|+.+.|+||++.. +..++++.... ..+..++-.||++...+.+ .-++.++-++. -.
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g----~D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG----YD 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhC----Cc
Confidence 57889999998633 33444443211 3345577799998432222 23334444432 23
Q ss_pred EEEecCCCccc
Q 013060 178 VYLLRGNHESK 188 (450)
Q Consensus 178 v~lLRGNHE~~ 188 (450)
+. ..||||.-
T Consensus 78 a~-~~GNHEfD 87 (285)
T cd07405 78 AM-AVGNHEFD 87 (285)
T ss_pred EE-eecccccc
Confidence 44 44999974
No 111
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=83.25 E-value=1.5 Score=44.01 Aligned_cols=67 Identities=22% Similarity=0.207 Sum_probs=38.5
Q ss_pred cEEEEccCCCCHH----------------HHHHHHHh-cCCCCCCcceEeeCcccCCCCCh-------HHHHHHHHHhhh
Q 013060 117 RVVVVGDVHGQLH----------------DVLFLLRD-AGFPSKNCFFVFNGDYVDRGAWG-------LETFLLLLAWKV 172 (450)
Q Consensus 117 ~i~ViGDIHG~~~----------------dL~~il~~-~g~~~~~~~~vfLGDyVDRG~~s-------~evl~lL~~Lk~ 172 (450)
.|+-+.|+||++. .+.+.++. ......+..+|..||++..-+.+ .-++.++-.+
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~m-- 84 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMM-- 84 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhc--
Confidence 6888999999863 22222322 22223344567799998754332 2234444333
Q ss_pred hCCCcEEEecCCCccc
Q 013060 173 FLPHRVYLLRGNHESK 188 (450)
Q Consensus 173 ~~p~~v~lLRGNHE~~ 188 (450)
.-=.+..||||..
T Consensus 85 ---gyDa~tlGNHEFd 97 (282)
T cd07407 85 ---PYDLLTIGNHELY 97 (282)
T ss_pred ---CCcEEeecccccC
Confidence 2346788999994
No 112
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=82.90 E-value=2.7 Score=41.63 Aligned_cols=67 Identities=25% Similarity=0.273 Sum_probs=45.2
Q ss_pred cEEEEccCCCCHH--HHHHHHHhcCCCCCCcceEeeCcccCCC-CChHHHHHHHHHhhhhCCCcEEEecCCCccc
Q 013060 117 RVVVVGDVHGQLH--DVLFLLRDAGFPSKNCFFVFNGDYVDRG-AWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 117 ~i~ViGDIHG~~~--dL~~il~~~g~~~~~~~~vfLGDyVDRG-~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
+|.+||||=|..- .+...|.........+.+|-.||..--| .-+.++...|..+.+ .++.+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccC
Confidence 5789999999864 3455555543333334466789998766 367788888877643 45555 999874
No 113
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=81.27 E-value=2.5 Score=43.03 Aligned_cols=66 Identities=24% Similarity=0.258 Sum_probs=40.8
Q ss_pred cEEEEccCCCCHH------HHHHHHHhcCCC----CCCcceEeeCcccCCCCC-------------hHHHHHHHHHhhhh
Q 013060 117 RVVVVGDVHGQLH------DVLFLLRDAGFP----SKNCFFVFNGDYVDRGAW-------------GLETFLLLLAWKVF 173 (450)
Q Consensus 117 ~i~ViGDIHG~~~------dL~~il~~~g~~----~~~~~~vfLGDyVDRG~~-------------s~evl~lL~~Lk~~ 173 (450)
.|+-+.|+||++. .+..+++..... ..+..+|..||.+.-++. ..-++.++-++..
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~- 80 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV- 80 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC-
Confidence 4677899999963 333344443221 334568889998875443 3344555555532
Q ss_pred CCCcEEEecCCCcc
Q 013060 174 LPHRVYLLRGNHES 187 (450)
Q Consensus 174 ~p~~v~lLRGNHE~ 187 (450)
=.+..||||.
T Consensus 81 ----Da~tlGNHEF 90 (313)
T cd08162 81 ----QAIALGNHEF 90 (313)
T ss_pred ----cEEecccccc
Confidence 3677899996
No 114
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=79.99 E-value=3.8 Score=43.53 Aligned_cols=69 Identities=19% Similarity=0.307 Sum_probs=52.9
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCC-CcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCC
Q 013060 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSK-NCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNH 185 (450)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~il~~~g~~~~-~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNH 185 (450)
.+|.||||+-|+++.|.+-.+...-... =+.++++|++.+.-..+.|++.+....+ ..|--+|++-+|-
T Consensus 6 ~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 6 AKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred ceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 4999999999999999887655432211 1348999999998778899888886643 5777888888776
No 115
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=79.30 E-value=2.8 Score=46.89 Aligned_cols=67 Identities=25% Similarity=0.320 Sum_probs=43.3
Q ss_pred cEEEEccCCCCHHH----------------HHHHHHhcCCCCCCcceEeeCcccCCCCChH-------------HHHHHH
Q 013060 117 RVVVVGDVHGQLHD----------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL-------------ETFLLL 167 (450)
Q Consensus 117 ~i~ViGDIHG~~~d----------------L~~il~~~g~~~~~~~~vfLGDyVDRG~~s~-------------evl~lL 167 (450)
+|+-..|+||++.. +..++++..-...+..+|-.||++...+.+- -++..+
T Consensus 27 ~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~am 106 (649)
T PRK09420 27 RIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYKAM 106 (649)
T ss_pred EEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHHHH
Confidence 88999999999743 3344554433334556888999987655431 245555
Q ss_pred HHhhhhCCCcEEEecCCCccc
Q 013060 168 LAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 168 ~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
-.|. -=....||||.-
T Consensus 107 N~lg-----yDa~tlGNHEFd 122 (649)
T PRK09420 107 NTLD-----YDVGNLGNHEFN 122 (649)
T ss_pred HhcC-----CcEEeccchhhh
Confidence 5543 346778999973
No 116
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=77.63 E-value=3.3 Score=46.19 Aligned_cols=67 Identities=30% Similarity=0.341 Sum_probs=42.1
Q ss_pred cEEEEccCCCCHHH----------------HHHHHHhcCCCCCCcceEeeCcccCCCCCh-------------HHHHHHH
Q 013060 117 RVVVVGDVHGQLHD----------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-------------LETFLLL 167 (450)
Q Consensus 117 ~i~ViGDIHG~~~d----------------L~~il~~~g~~~~~~~~vfLGDyVDRG~~s-------------~evl~lL 167 (450)
+|+-..|+||++.. +..++++..-...+..+|-.||.+...+.+ .-++..+
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~m 83 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAM 83 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHH
Confidence 78889999999743 334455443333455678899999765443 1244444
Q ss_pred HHhhhhCCCcEEEecCCCccc
Q 013060 168 LAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 168 ~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
-.|. -=....||||.-
T Consensus 84 N~lg-----yDa~tlGNHEFd 99 (626)
T TIGR01390 84 NLLK-----YDVGNLGNHEFN 99 (626)
T ss_pred hhcC-----ccEEeccccccc
Confidence 4442 235778999963
No 117
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=76.18 E-value=3.6 Score=44.63 Aligned_cols=67 Identities=27% Similarity=0.347 Sum_probs=43.6
Q ss_pred cEEEEccCCCCHH------------HH---HHHHHhcCCCCCCcceEeeCcccCCCC------ChHHHHHHHHHhhhhCC
Q 013060 117 RVVVVGDVHGQLH------------DV---LFLLRDAGFPSKNCFFVFNGDYVDRGA------WGLETFLLLLAWKVFLP 175 (450)
Q Consensus 117 ~i~ViGDIHG~~~------------dL---~~il~~~g~~~~~~~~vfLGDyVDRG~------~s~evl~lL~~Lk~~~p 175 (450)
+|+-..|+||++. -+ ..++++..-...+..+|=.||++++.+ .....+.+|-.++.
T Consensus 28 ~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y--- 104 (517)
T COG0737 28 TILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY--- 104 (517)
T ss_pred EEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC---
Confidence 7889999999998 33 333444333333555777999999833 23445666655542
Q ss_pred CcEEEecCCCccc
Q 013060 176 HRVYLLRGNHESK 188 (450)
Q Consensus 176 ~~v~lLRGNHE~~ 188 (450)
=.+..||||.-
T Consensus 105 --Da~tiGNHEFd 115 (517)
T COG0737 105 --DAMTLGNHEFD 115 (517)
T ss_pred --cEEeecccccc
Confidence 36677999995
No 118
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=74.45 E-value=5.1 Score=37.62 Aligned_cols=72 Identities=15% Similarity=0.204 Sum_probs=37.5
Q ss_pred EEEEccCCCC-----HHHHHHHHHhcC-CCCCCcceEeeCcccCCCCChH------------H-HHHHHHHhh--hhCCC
Q 013060 118 VVVVGDVHGQ-----LHDVLFLLRDAG-FPSKNCFFVFNGDYVDRGAWGL------------E-TFLLLLAWK--VFLPH 176 (450)
Q Consensus 118 i~ViGDIHG~-----~~dL~~il~~~g-~~~~~~~~vfLGDyVDRG~~s~------------e-vl~lL~~Lk--~~~p~ 176 (450)
|++++|+|=. ++.|..+|.... -...+ .+|++|+++|.-.... + -+..+..+. +..--
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~-~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 79 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPD-VLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPST 79 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTEC-EEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCS
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCc-EEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhccccc
Confidence 5677777744 556667776665 33334 4999999999632221 1 111111111 11224
Q ss_pred cEEEecCCCccccc
Q 013060 177 RVYLLRGNHESKYC 190 (450)
Q Consensus 177 ~v~lLRGNHE~~~~ 190 (450)
+|+++.|+||-...
T Consensus 80 ~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 80 QVVLVPGPNDPTSS 93 (209)
T ss_dssp EEEEE--TTCTT-S
T ss_pred EEEEeCCCcccccc
Confidence 89999999998654
No 119
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=74.13 E-value=2.4 Score=45.00 Aligned_cols=41 Identities=27% Similarity=0.438 Sum_probs=35.0
Q ss_pred ceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCcccccc
Q 013060 146 FFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCT 191 (450)
Q Consensus 146 ~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~ 191 (450)
++-.+||+-||||++-.++..|..+ ..+-+--||||.-+|.
T Consensus 193 hLHiVGDIyDRGP~pd~Imd~L~~y-----hsvDiQWGNHDilWmg 233 (648)
T COG3855 193 HLHIVGDIYDRGPYPDKIMDTLINY-----HSVDIQWGNHDILWMG 233 (648)
T ss_pred heeeecccccCCCCchHHHHHHhhc-----ccccccccCcceEEee
Confidence 3778999999999999999998765 4778889999987764
No 120
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=73.83 E-value=4.1 Score=48.74 Aligned_cols=66 Identities=24% Similarity=0.282 Sum_probs=40.0
Q ss_pred cEEEEccCCCCHHH----------------HHHHHHhcCCCCCCcceEeeCcccCCCCC--------------hHHHHHH
Q 013060 117 RVVVVGDVHGQLHD----------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAW--------------GLETFLL 166 (450)
Q Consensus 117 ~i~ViGDIHG~~~d----------------L~~il~~~g~~~~~~~~vfLGDyVDRG~~--------------s~evl~l 166 (450)
+|+...|+||++.. +..++++......+..+|-.||++...+. ...++..
T Consensus 43 ~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~~ 122 (1163)
T PRK09419 43 QILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIKA 122 (1163)
T ss_pred EEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHHH
Confidence 78999999998632 33445544333344545559999986552 1233444
Q ss_pred HHHhhhhCCCcEEEecCCCcc
Q 013060 167 LLAWKVFLPHRVYLLRGNHES 187 (450)
Q Consensus 167 L~~Lk~~~p~~v~lLRGNHE~ 187 (450)
+-++ +--.+..||||.
T Consensus 123 mN~l-----gyDa~~lGNHEF 138 (1163)
T PRK09419 123 MNAL-----GYDAGTLGNHEF 138 (1163)
T ss_pred Hhhc-----CccEEeeccccc
Confidence 4333 223566899997
No 121
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=73.28 E-value=6.4 Score=43.17 Aligned_cols=67 Identities=21% Similarity=0.211 Sum_probs=40.0
Q ss_pred cEEEEccCCCCHHH---------------------HHHHHHhcCCCCCCcceEeeCcccCCCCCh-----HHHHHHHHHh
Q 013060 117 RVVVVGDVHGQLHD---------------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAW 170 (450)
Q Consensus 117 ~i~ViGDIHG~~~d---------------------L~~il~~~g~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~L 170 (450)
.|+-+.|+||++.. |..++++..-...+..+|..||++...+.+ ...+.++-++
T Consensus 2 tILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~ 81 (550)
T TIGR01530 2 SIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAA 81 (550)
T ss_pred EEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhcc
Confidence 46677888887533 334444443333455678899998654433 2334444444
Q ss_pred hhhCCCcEEEecCCCccc
Q 013060 171 KVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 171 k~~~p~~v~lLRGNHE~~ 188 (450)
. --++..||||.-
T Consensus 82 g-----~Da~~lGNHEFd 94 (550)
T TIGR01530 82 G-----FDFFTLGNHEFD 94 (550)
T ss_pred C-----CCEEEecccccc
Confidence 2 347788999973
No 122
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=72.87 E-value=5.1 Score=45.99 Aligned_cols=67 Identities=27% Similarity=0.299 Sum_probs=42.2
Q ss_pred cEEEEccCCCCHHH----------------HHHHHHhcCCCCCCcceEeeCcccCCCCCh--------------HHHHHH
Q 013060 117 RVVVVGDVHGQLHD----------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAWG--------------LETFLL 166 (450)
Q Consensus 117 ~i~ViGDIHG~~~d----------------L~~il~~~g~~~~~~~~vfLGDyVDRG~~s--------------~evl~l 166 (450)
+|+-..|+||++.. +..++++......+..+|..||++-.-+.+ .-++..
T Consensus 117 tIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~a 196 (814)
T PRK11907 117 RILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYAA 196 (814)
T ss_pred EEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHHH
Confidence 78899999999642 233444443333455688899998754432 125555
Q ss_pred HHHhhhhCCCcEEEecCCCccc
Q 013060 167 LLAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 167 L~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
+-.|. --.+..||||.-
T Consensus 197 mN~LG-----yDA~tLGNHEFD 213 (814)
T PRK11907 197 LEALG-----FDAGTLGNHEFN 213 (814)
T ss_pred HhccC-----CCEEEechhhcc
Confidence 55543 236778999973
No 123
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=68.64 E-value=5.4 Score=43.64 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=37.6
Q ss_pred cEEEEccCCCCHHH----------HHHHHHhcC----CCCCCcceEeeCcccCCCCCh-----HHHHHHHHHhhhhCCCc
Q 013060 117 RVVVVGDVHGQLHD----------VLFLLRDAG----FPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAWKVFLPHR 177 (450)
Q Consensus 117 ~i~ViGDIHG~~~d----------L~~il~~~g----~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~Lk~~~p~~ 177 (450)
.|+-+.|+||++.. +..+++... ....+..+|..||++...+.+ .-++.++-++. -.
T Consensus 36 til~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g----~D 111 (551)
T PRK09558 36 TILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG----YD 111 (551)
T ss_pred EEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----CC
Confidence 78899999999741 223343322 123345578899998533222 22334444432 23
Q ss_pred EEEecCCCccc
Q 013060 178 VYLLRGNHESK 188 (450)
Q Consensus 178 v~lLRGNHE~~ 188 (450)
+.. .||||.-
T Consensus 112 a~t-lGNHEFD 121 (551)
T PRK09558 112 AMA-VGNHEFD 121 (551)
T ss_pred EEc-ccccccC
Confidence 444 4999974
No 124
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=68.05 E-value=9.6 Score=34.80 Aligned_cols=63 Identities=22% Similarity=0.380 Sum_probs=48.2
Q ss_pred cEEEEccCC--CCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccc
Q 013060 117 RVVVVGDVH--GQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 117 ~i~ViGDIH--G~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
-+.|+||+| -+..+|-.-|++.-.|..=..++++|++. |.|++.+|..+. ..++++||-.|..
T Consensus 2 LvL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~ 66 (183)
T KOG3325|consen 2 LVLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN 66 (183)
T ss_pred EEEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc
Confidence 467999999 34456666677666676666799999964 789999998764 5899999987763
No 125
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=62.27 E-value=12 Score=37.45 Aligned_cols=69 Identities=25% Similarity=0.380 Sum_probs=43.8
Q ss_pred CCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCC-cEEEecCCCccccc
Q 013060 113 DQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPH-RVYLLRGNHESKYC 190 (450)
Q Consensus 113 ~~~~~i~ViGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~-~v~lLRGNHE~~~~ 190 (450)
+...+++.|+|.|+...+.. ..|+.+. ++.+||+-.-| .+-||+.+=..+ -..|. .=+.|+||||..+-
T Consensus 59 ~~~~r~VcisdtH~~~~~i~------~~p~gDv-lihagdfT~~g-~~~ev~~fn~~~-gslph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 59 PGYARFVCISDTHELTFDIN------DIPDGDV-LIHAGDFTNLG-LPEEVIKFNEWL-GSLPHEYKIVIAGNHELTFD 128 (305)
T ss_pred CCceEEEEecCcccccCccc------cCCCCce-EEeccCCcccc-CHHHHHhhhHHh-ccCcceeeEEEeeccceeec
Confidence 46679999999998865533 2444444 78999987654 344555433222 12332 34789999999643
No 126
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=60.74 E-value=13 Score=42.71 Aligned_cols=66 Identities=26% Similarity=0.316 Sum_probs=40.7
Q ss_pred cEEEEccCCCCHHH----------------HHHHHHhcCCCCCCcceEeeCcccCCCCCh-------------------H
Q 013060 117 RVVVVGDVHGQLHD----------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-------------------L 161 (450)
Q Consensus 117 ~i~ViGDIHG~~~d----------------L~~il~~~g~~~~~~~~vfLGDyVDRG~~s-------------------~ 161 (450)
+|+-..|+||++.. +..++++......+..+|..||++-.-+.+ .
T Consensus 41 ~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~~~ 120 (780)
T PRK09418 41 RILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSYTH 120 (780)
T ss_pred EEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccccch
Confidence 78999999999632 333444443333455678899987433222 2
Q ss_pred HHHHHHHHhhhhCCCcEEEecCCCcc
Q 013060 162 ETFLLLLAWKVFLPHRVYLLRGNHES 187 (450)
Q Consensus 162 evl~lL~~Lk~~~p~~v~lLRGNHE~ 187 (450)
-++.++-.|. -=.+..||||.
T Consensus 121 p~i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 121 PLYRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred HHHHHHhccC-----CCEEecccccc
Confidence 3455554443 23677899996
No 127
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=59.57 E-value=15 Score=38.59 Aligned_cols=72 Identities=15% Similarity=0.177 Sum_probs=40.7
Q ss_pred cEEEEccCCCCHHHHHH---HHHhcCCCCCCcceEeeCcccCCCCChH------HHHHHHHHhhh-hCCCcEEEecCCCc
Q 013060 117 RVVVVGDVHGQLHDVLF---LLRDAGFPSKNCFFVFNGDYVDRGAWGL------ETFLLLLAWKV-FLPHRVYLLRGNHE 186 (450)
Q Consensus 117 ~i~ViGDIHG~~~dL~~---il~~~g~~~~~~~~vfLGDyVDRG~~s~------evl~lL~~Lk~-~~p~~v~lLRGNHE 186 (450)
+++++||-=+-.+.-.. .+....-...-+.+|-+||-++.|..++ +.++-++.-.. .-.-.++++.||||
T Consensus 28 ~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNHD 107 (394)
T PTZ00422 28 RFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQAD 107 (394)
T ss_pred EEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCccc
Confidence 79999995332222222 2222211122234889999888887753 44555543211 01136899999999
Q ss_pred cc
Q 013060 187 SK 188 (450)
Q Consensus 187 ~~ 188 (450)
..
T Consensus 108 y~ 109 (394)
T PTZ00422 108 WD 109 (394)
T ss_pred cc
Confidence 73
No 128
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=56.62 E-value=35 Score=34.50 Aligned_cols=77 Identities=16% Similarity=0.156 Sum_probs=48.6
Q ss_pred CCCCcEEEEccCC----CCHHHHHHHHHhcC--CCC--CCcceEeeCcccCCC----CCh----HHHHHHHHHh-hhhCC
Q 013060 113 DQDSRVVVVGDVH----GQLHDVLFLLRDAG--FPS--KNCFFVFNGDYVDRG----AWG----LETFLLLLAW-KVFLP 175 (450)
Q Consensus 113 ~~~~~i~ViGDIH----G~~~dL~~il~~~g--~~~--~~~~~vfLGDyVDRG----~~s----~evl~lL~~L-k~~~p 175 (450)
+...+++|+||+| -.++.|.++|.... ++. ....+||+|+++-+. ..+ .|-+.-|..+ ...+|
T Consensus 25 ~~~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp 104 (291)
T PTZ00235 25 DKRHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFK 104 (291)
T ss_pred CCceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhCh
Confidence 3456899999999 45566777776552 121 123589999998652 222 2344444432 22455
Q ss_pred -----CcEEEecCCCcccc
Q 013060 176 -----HRVYLLRGNHESKY 189 (450)
Q Consensus 176 -----~~v~lLRGNHE~~~ 189 (450)
.+++++.|-.|-+.
T Consensus 105 ~L~~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 105 LILEHCYLIFIPGINDPCA 123 (291)
T ss_pred HHHhcCeEEEECCCCCCCc
Confidence 58999999999753
No 129
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=51.18 E-value=18 Score=38.56 Aligned_cols=19 Identities=16% Similarity=0.422 Sum_probs=17.8
Q ss_pred hHHHHHHHcCCeEEEEecc
Q 013060 328 STEEFLKKFSLKLIIRSHE 346 (450)
Q Consensus 328 ~~~~FL~~n~l~~IIRgHe 346 (450)
.++..+-++++++++-||.
T Consensus 323 ~LE~l~~~~~VDvvf~GHv 341 (452)
T KOG1378|consen 323 GLEPLFVKYKVDVVFWGHV 341 (452)
T ss_pred HHHHHHHHhceeEEEeccc
Confidence 5899999999999999997
No 130
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=45.11 E-value=55 Score=31.09 Aligned_cols=87 Identities=20% Similarity=0.247 Sum_probs=61.7
Q ss_pred cceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCCccccccccccchH----------------HHHHHhcCcc
Q 013060 145 CFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEK----------------EVMAKYGDKG 208 (450)
Q Consensus 145 ~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNHE~~~~~~~~gf~~----------------e~~~~~~~~~ 208 (450)
..+||||- |-+.-|.+.+|-+|+-+|-.+.+. .|+-|.|..+....|.. |..+.| -
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~---l 111 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW---L 111 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhh---h
Confidence 45899985 999999999999998888777666 89999988765443321 122222 2
Q ss_pred hhhhhhhhhhhcCCCceeeecCcEEeecc-CC
Q 013060 209 KHAYRKCLGCFEGLPLASLIGKHVFTAHG-GL 239 (450)
Q Consensus 209 ~~~~~~~~~~f~~LPlaaii~~~i~~vHG-Gi 239 (450)
..+|..+...+.++++...+-..++++.| |-
T Consensus 112 tSv~Tti~all~s~~lv~RirPdlil~NGPGT 143 (211)
T KOG3339|consen 112 TSVFTTIWALLQSFVLVWRIRPDLILCNGPGT 143 (211)
T ss_pred hhHHHHHHHHHHHheEEEecCCCEEEECCCCc
Confidence 34566667777777888777777777777 54
No 131
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=44.08 E-value=58 Score=35.68 Aligned_cols=56 Identities=18% Similarity=0.179 Sum_probs=39.7
Q ss_pred CCCcEEEEccCC------------CCHHHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHh
Q 013060 114 QDSRVVVVGDVH------------GQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAW 170 (450)
Q Consensus 114 ~~~~i~ViGDIH------------G~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~L 170 (450)
+..+|.|..|+| -.|..|..||..+.-..-+ .++.=||++.--.-|..+|...+.|
T Consensus 12 ntirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VD-miLlGGDLFHeNkPSr~~L~~~i~l 79 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVD-MILLGGDLFHENKPSRKTLHRCLEL 79 (646)
T ss_pred cceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCc-EEEecCcccccCCccHHHHHHHHHH
Confidence 345899999999 2456778888877544444 3778899998887787766555443
No 132
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=37.32 E-value=1.7e+02 Score=28.83 Aligned_cols=56 Identities=29% Similarity=0.554 Sum_probs=32.9
Q ss_pred CCcEEEecCCCccccccccccchHHHHHHhcCc---chhhhhhhhhhhcCCCceeee-cCcEEeeccCCCC
Q 013060 175 PHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDK---GKHAYRKCLGCFEGLPLASLI-GKHVFTAHGGLFR 241 (450)
Q Consensus 175 p~~v~lLRGNHE~~~~~~~~gf~~e~~~~~~~~---~~~~~~~~~~~f~~LPlaaii-~~~i~~vHGGi~~ 241 (450)
.++|++|-||||.-. |..| .+++... ..+.| ..+..+|++-.- ..+|+..|-||-+
T Consensus 127 nknvvvlagnhein~-ngny------~arlanhkls~gDTY----nlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 127 NKNVVVLAGNHEINF-NGNY------MARLANHKLSAGDTY----NLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred ccceEEEecCceecc-CchH------HHHHhhCCCCccchh----hccccccccccCcchhhhhcccCcee
Confidence 368999999999852 2222 2222211 22333 445667776543 3478888888865
No 133
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=34.91 E-value=65 Score=25.88 Aligned_cols=69 Identities=17% Similarity=0.050 Sum_probs=46.5
Q ss_pred cEEEEccCCCCHHHHHHHHHhcCC-CCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEecCCC
Q 013060 117 RVVVVGDVHGQLHDVLFLLRDAGF-PSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNH 185 (450)
Q Consensus 117 ~i~ViGDIHG~~~dL~~il~~~g~-~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lLRGNH 185 (450)
.+.||=|---+.+.+..+++.+.- .+..+.++.+|+.-|+|....+....+..+...+...+++...|+
T Consensus 13 ~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 13 GPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 467888877788888888876532 234566899999999888888766666665555566666655554
No 134
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=31.32 E-value=35 Score=37.88 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=30.8
Q ss_pred ChhhHHHHHHHcCCe----EEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEe
Q 013060 325 GPDSTEEFLKKFSLK----LIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLF 379 (450)
Q Consensus 325 G~~~~~~FL~~n~l~----~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~gkliTvF 379 (450)
.++..+..|+..|++ .||-||.++. +..|=... .++||++.|-
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk----------~k~GEsPI--Ka~Gkl~VID 553 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVK----------VKKGESPI--KANGKLIVID 553 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccc----------cCCCCCCc--cCCCEEEEEc
Confidence 345567778889997 9999999865 34554432 3589999884
No 135
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=25.33 E-value=2.2e+02 Score=23.98 Aligned_cols=43 Identities=26% Similarity=0.465 Sum_probs=26.5
Q ss_pred HHHHHHHHhcCCCCCCcceEeeCcccCCCCChHHHHHHHHHhhhhCCCcEEEe
Q 013060 129 HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLL 181 (450)
Q Consensus 129 ~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~Lk~~~p~~v~lL 181 (450)
..+.++++.. | +.++|++|| -|..-.|+..-+.. .||++|..+
T Consensus 53 ~~i~~i~~~f--P--~~kfiLIGD---sgq~DpeiY~~ia~---~~P~~i~ai 95 (100)
T PF09949_consen 53 DNIERILRDF--P--ERKFILIGD---SGQHDPEIYAEIAR---RFPGRILAI 95 (100)
T ss_pred HHHHHHHHHC--C--CCcEEEEee---CCCcCHHHHHHHHH---HCCCCEEEE
Confidence 4455555543 2 334888887 46666777776654 688877543
No 136
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=23.73 E-value=1e+02 Score=31.16 Aligned_cols=70 Identities=24% Similarity=0.347 Sum_probs=41.2
Q ss_pred CCcEEEEccC--CCCHHHHHHHHHh--cCCCCCCcceEeeCccc-CCCCChH------HHHHHHH---HhhhhCCCcEEE
Q 013060 115 DSRVVVVGDV--HGQLHDVLFLLRD--AGFPSKNCFFVFNGDYV-DRGAWGL------ETFLLLL---AWKVFLPHRVYL 180 (450)
Q Consensus 115 ~~~i~ViGDI--HG~~~dL~~il~~--~g~~~~~~~~vfLGDyV-DRG~~s~------evl~lL~---~Lk~~~p~~v~l 180 (450)
.-+++||||- +|.+..-+..+.. +|-.-.-+.+|-+||=+ |-|..+. +.+.-++ .|+ ...+.
T Consensus 43 slsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQ----kpWy~ 118 (336)
T KOG2679|consen 43 SLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQ----KPWYS 118 (336)
T ss_pred ceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccc----cchhh
Confidence 3489999994 7777655554433 22111123478899954 5565542 2333332 222 35899
Q ss_pred ecCCCccc
Q 013060 181 LRGNHESK 188 (450)
Q Consensus 181 LRGNHE~~ 188 (450)
+.||||.+
T Consensus 119 vlGNHDyr 126 (336)
T KOG2679|consen 119 VLGNHDYR 126 (336)
T ss_pred hccCcccc
Confidence 99999986
No 137
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=21.39 E-value=1e+02 Score=30.81 Aligned_cols=39 Identities=26% Similarity=0.243 Sum_probs=25.3
Q ss_pred ceEeeCcccCCCCChHHHH-HHHHHhhhhCCCcEEEecCCCccc
Q 013060 146 FFVFNGDYVDRGAWGLETF-LLLLAWKVFLPHRVYLLRGNHESK 188 (450)
Q Consensus 146 ~~vfLGDyVDRG~~s~evl-~lL~~Lk~~~p~~v~lLRGNHE~~ 188 (450)
+++|+||+| |.-+.+.+ .+|-.+|.+++..+.+. |=|..
T Consensus 2 ~ilfiGDi~--G~~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVY--GKAGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecC--CHHHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 489999999 44445554 45566777776555544 65665
Done!