Query 013067
Match_columns 450
No_of_seqs 166 out of 584
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 03:34:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013067.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013067hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z07_A Putative uncharacterize 100.0 7.9E-31 2.7E-35 270.6 23.3 303 19-402 43-418 (420)
2 2jg0_A Periplasmic trehalase; 100.0 3.6E-31 1.2E-35 283.0 21.1 293 19-408 139-504 (535)
3 3c68_A Uncharacterized protein 100.0 1.3E-29 4.6E-34 280.7 31.1 323 19-406 333-757 (761)
4 3qde_A Cellobiose phosphorylas 100.0 7.2E-30 2.5E-34 284.7 28.0 326 15-410 364-738 (811)
5 3rrs_A Cellobiose phosphorylas 100.0 7.5E-30 2.6E-34 284.8 22.8 323 19-411 376-752 (822)
6 1v7w_A Chitobiose phosphorylas 100.0 1.2E-28 4E-33 273.9 23.4 336 15-410 353-729 (807)
7 2okx_A Rhamnosidase B; alpha b 99.9 1.2E-20 4.3E-25 213.6 27.7 283 15-410 585-882 (956)
8 3cih_A Putative alpha-rhamnosi 99.9 5.5E-21 1.9E-25 211.1 21.0 242 83-410 379-642 (739)
9 1ulv_A Glucodextranase; GH fam 99.6 2.1E-13 7.3E-18 155.2 23.9 295 18-407 341-668 (1020)
10 1lf6_A Glucoamylase; (alpha/al 99.5 4E-13 1.4E-17 147.4 21.7 298 18-407 352-667 (684)
11 2p0v_A Hypothetical protein BT 99.1 8.7E-10 3E-14 115.6 16.5 257 85-406 178-468 (489)
12 3p2c_A Putative glycosyl hydro 98.9 3.9E-08 1.3E-12 102.5 16.6 259 84-404 160-448 (463)
13 2fba_A Glucoamylase Glu1; (alp 98.9 2.2E-07 7.5E-12 98.4 22.3 244 84-406 142-485 (492)
14 3qt9_A Putative uncharacterize 98.7 7.4E-07 2.5E-11 92.1 19.3 258 83-402 131-418 (427)
15 1gai_A Glucoamylase-471; hydro 98.6 3.2E-06 1.1E-10 89.1 22.6 235 89-407 132-429 (472)
16 2vn4_A Glucoamylase; hydrolase 98.6 2.5E-06 8.5E-11 92.3 22.0 235 89-407 133-434 (599)
17 3qry_B Putative uncharacterize 98.5 2.3E-06 8E-11 88.3 17.2 258 83-402 130-418 (426)
18 2rdy_A BH0842 protein; PSI-II, 95.8 0.26 9.1E-06 54.8 17.7 88 89-178 450-545 (803)
19 2eab_A Alpha-fucosidase; glyco 93.8 1.2 4.2E-05 50.2 16.5 83 88-177 507-598 (899)
20 1h54_A Maltose phosphorylase; 90.8 0.83 2.8E-05 50.5 10.1 78 89-173 429-513 (754)
21 2gz6_A N-acetyl-D-glucosamine 84.8 24 0.00083 34.6 15.7 100 86-205 53-153 (388)
22 2zzr_A Unsaturated glucuronyl 80.8 19 0.00064 36.7 13.2 92 11-127 117-211 (397)
23 3gt5_A N-acetylglucosamine 2-e 76.8 46 0.0016 33.2 14.6 93 92-206 57-151 (402)
24 2ahf_A Unsaturated glucuronyl 72.3 84 0.0029 31.6 18.1 95 9-127 89-186 (377)
25 2zbl_A Putative isomerase; N-a 71.4 86 0.0029 31.4 15.1 102 82-206 47-149 (421)
26 1nc5_A Hypothetical protein YT 48.3 2E+02 0.0069 28.2 12.8 17 390-406 213-229 (373)
27 3k7x_A LIN0763 protein; Q92DQ0 47.2 1.5E+02 0.0051 29.2 11.6 104 83-204 147-250 (349)
28 3gt5_A N-acetylglucosamine 2-e 41.7 2.5E+02 0.0084 27.8 12.4 91 93-204 254-347 (402)
29 2gz6_A N-acetyl-D-glucosamine 29.6 3.9E+02 0.013 25.7 19.6 100 84-206 112-211 (388)
30 1fp3_A N-acyl-D-glucosamine 2- 21.4 4E+02 0.014 25.9 9.7 107 92-259 252-366 (402)
31 3igm_B PF14_0633 protein; AP2 21.2 32 0.0011 27.1 1.1 27 418-444 45-71 (77)
32 2jg0_A Periplasmic trehalase; 20.7 3.3E+02 0.011 28.4 9.3 44 323-367 115-158 (535)
No 1
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=99.97 E-value=7.9e-31 Score=270.62 Aligned_cols=303 Identities=14% Similarity=0.130 Sum_probs=211.3
Q ss_pred hccCChHHHHHHHHhhccccccccCCCCCCCCCCCcceecccccccccccccc-CCC-CC-CCCCC-CcCCCCcHHHHHH
Q 013067 19 KERGKSSGISSFILCNCSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVL-DPD-FG-ESAIG-RVAPVDSGLWWII 94 (450)
Q Consensus 19 ~~~g~~e~~r~~L~~~qs~~~~~d~~~~~~Gl~Pn~fki~~~~~~~~~~~~~~-~ad-~G-e~~~~-~y~sVDatLWfi~ 94 (450)
+....++.++.-|..+... .+. ..|+||+.+ .+++ +..+- .++ .| +.+++ ++.+.|.++++++
T Consensus 43 l~~~~~~~a~~~l~~~~~~-----~q~-~~G~ip~~v--~~~~-----~~~y~p~~~~w~~~~~~~~~~~~~~qpP~~~~ 109 (420)
T 2z07_A 43 WTQVDWERAWQELLCLFDY-----GQG-PDGMLPHIV--FHEQ-----SRDYFPGPDVWGREARAQPATSGITQPPVVAT 109 (420)
T ss_dssp HTTTCHHHHHHHHHHHHHH-----HCC-TTCCCCSEE--ECCS-----CCCCC-----------CCCEECSSCCCCCHHH
T ss_pred HHhcCHHHHHHHHHHHHHH-----HHh-hCCCcceec--ccCC-----CcccCcchhhhcccccccCCCCCCcCCcHHHH
Confidence 4556788888766533220 112 689999643 1111 00000 000 01 12222 3578999999999
Q ss_pred HHHHHHHHhCC----hhhhcc--hhHHHHHHHHHHhhhc--CCCCCC-CcccccCC----Ccccccc----cc------C
Q 013067 95 LLRAYGKITGD----YALQER--VDVQTGIKLIMNLCLA--DGFDMF-PSLLVTDG----SCMIDRR----MG------I 151 (450)
Q Consensus 95 al~~Y~~~TgD----~~f~~~--p~l~~~i~~i~~~~~~--~~~~~~-~~L~~~dg----~twmD~~----~p------R 151 (450)
++++|++.||| .+|+++ |.+++.++|+.+.... +|.... .. -.+| ..|+|.. .| |
T Consensus 110 ~~~~~~~~tgD~~~~~~~L~~~~p~l~~~~~~~~~~~d~~~~Gl~~~~~~--we~G~~~~~~w~~~~~~~~~~~~~~y~r 187 (420)
T 2z07_A 110 VVRYLYEKDPDRDRARERARYLFPKLLAFHRWLYHARDPYRTGLVVIVHP--WESGMDNSPAWDKPLSRVPVENLPPYER 187 (420)
T ss_dssp HHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCBSSG--GGGTCTTCGGGHHHHHTCCC--------
T ss_pred HHHHHHHhCccchhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceeeecC--CCcCCCCCccccccccccCCCCcchhhh
Confidence 99999999999 899998 9999999998765432 222110 00 0122 2666641 11 1
Q ss_pred -------------------------------------------CCCcchhhHHHHHHHHHHHHHHhhcCCCCChHHHHHH
Q 013067 152 -------------------------------------------HGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAI 188 (450)
Q Consensus 152 -------------------------------------------~G~pVEInALwYnAL~~~~~La~~~g~~~~~~~~~~~ 188 (450)
.+.+|++||++|.+++.+++|++.+|+ + ++++
T Consensus 188 ~d~~~~~~~~~p~~~~~~~~~~~~~~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~lg~--~---a~~~ 262 (420)
T 2z07_A 188 RDVKHVNPEERPRKEDYDRYLSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQE--D---PYEI 262 (420)
T ss_dssp ---CCSCC-------CHHHHHHHHHHHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHTTC--C---CHHH
T ss_pred hhhhccccccCCcHHHHHHHHHHHHHHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHHhCc--c---HHHH
Confidence 135889999999999999999999985 2 4566
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhhcccCCCCCCccccccccccCCCceeecc-cCCCccCcccccc
Q 013067 189 NNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGN-LQPAHMDFRFFTL 267 (450)
Q Consensus 189 ~~~~~~L~~~~~~~FW~~~~~~~~~~~~~~~~y~~~a~~~f~~~~~~ip~~l~~~~~~~~~Yl~~~-v~p~~~d~r~~~~ 267 (450)
.++++.+++.|++ ||.++++ +++|. ++.+.. .+....
T Consensus 263 ~~~a~~~~~ai~~-~Wd~~~g----------------------------------------~~~d~~~~~g~~-~~~~~~ 300 (420)
T 2z07_A 263 EEWIVRGEVGLEA-LWDREAG----------------------------------------FYFSWDLVAGEP-IAVKTS 300 (420)
T ss_dssp HHHHHHHHHHHHH-TEETTTT----------------------------------------EECCEETTTTEE-CCCCBG
T ss_pred HHHHHHHHHHHHH-hhCcccC----------------------------------------eeEeeeCCCCCe-eccccH
Confidence 7888889999999 9965321 11121 111111 012455
Q ss_pred cchHHHhccCCCHHHHHHHHHHHHHhhhhhh--cCCCCccccCCCCCCCCccccCCCCCCCCCcccCCCCchhhHHHHHH
Q 013067 268 GNLWSIVSSLGTPKQNESILNLIEAKWDDLV--GHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTL 345 (450)
Q Consensus 268 gn~Lal~~gll~~~qa~~V~~~v~~~~~~Ll--tp~gLR~L~P~~~d~~w~~~~~g~~~~rp~aYHNG~VWP~l~g~~~~ 345 (450)
.+++++++++++++++++|++.+. +++ +++|++|++| +++.++|.+||||+|||+++++++.
T Consensus 301 ~~~~pL~~g~~~~~~a~~v~~~l~----~~~~~~~~gi~t~~~------------~~~~y~~~~yw~gpvW~~~~~~~~~ 364 (420)
T 2z07_A 301 AGFLPLFAGTPHQGRASLLAQEAE----RWGEKARYLLPSVDP------------TSPFFEPGRYWRGPVWINVNWMVAE 364 (420)
T ss_dssp GGGTHHHHTCSCHHHHHHHHHHHH----HHTTTCSSSCBSBCT------------TSTTCCTTSTTSSCBCHHHHHHHHH
T ss_pred HhHHHHHcCCCCHHHHHHHHHHHH----HHhccCCCCcCcCCC------------cCcccCCcCCCCCCcchhHHHHHHH
Confidence 677889999999999999999986 577 9999999998 3445677899999999999999999
Q ss_pred HHHHhCChHHHHHHHHHHHhhCCCCCCcccccCCCCCccCCCCChhhhHHHHHHHHH
Q 013067 346 ACIKMGRLGLAQKAVALAENRLPLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTS 402 (450)
Q Consensus 346 Al~r~G~~~~A~~ll~~~~~~l~~~~~~E~FDG~~g~p~G~~ac~~QAWSaA~~Lr~ 402 (450)
|+.++|+.+.|.+++......+..++|.|.||+.+|.|.|+ ..|+||+|.+|.+
T Consensus 365 gL~~~G~~~~A~~l~~~~~~~~~~~~~~E~yd~~~g~~~g~---~~fgWs~~~~l~l 418 (420)
T 2z07_A 365 GFRDYGFAALAARLKADALALMEREGFREYYDPLTGQGRGG---EGFSWSAALALFW 418 (420)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHCSEEEECTTTCCEEEE---ESCHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHhcCCeeeeeCCCCCCcCCC---CCCchHHHHHHHH
Confidence 99999999999888876555445589999999999887755 4999999998875
No 2
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=99.97 E-value=3.6e-31 Score=282.99 Aligned_cols=293 Identities=14% Similarity=0.137 Sum_probs=212.6
Q ss_pred hccCChHHHHHHHHhhccccccccCCCCCCCCCCCcceeccccccccccccccCCCCCCCCCCCcCCCCcHHHHHHHHHH
Q 013067 19 KERGKSSGISSFILCNCSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRA 98 (450)
Q Consensus 19 ~~~g~~e~~r~~L~~~qs~~~~~d~~~~~~Gl~Pn~fki~~~~~~~~~~~~~~~ad~Ge~~~~~y~sVDatLWfi~al~~ 98 (450)
+..|++++++++|..+.... ...|+|||-. . .+|++++.++.|++++++
T Consensus 139 l~~~~~~~A~~~l~~~~~~~-------~~~G~IPng~----------------------r--~yY~~~sqPPl~~~~v~~ 187 (535)
T 2jg0_A 139 AESGHWDKVADMVANFAHEI-------DTYGHIPNGN----------------------R--SYYLSRSQPPFFALMVEL 187 (535)
T ss_dssp HHTTCHHHHHHHHHHHHHHH-------HHHSSCCSBS----------------------B--GGGTTCCCSCCHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhh-------ccCCcccCCC----------------------C--ccCCCCCCccHHHHHHHH
Confidence 56899999999999654433 1569999732 0 257888888889999999
Q ss_pred HHHHhCChhhhcc--hhHHHHHHHHHHhhhcCC-----------CCCCCcccc-------c----------------C--
Q 013067 99 YGKITGDYALQER--VDVQTGIKLIMNLCLADG-----------FDMFPSLLV-------T----------------D-- 140 (450)
Q Consensus 99 Y~~~TgD~~f~~~--p~l~~~i~~i~~~~~~~~-----------~~~~~~L~~-------~----------------d-- 140 (450)
|+++|+| +|+++ |.+.+.++|.++.....+ -++ .+|.. + +
T Consensus 188 ~~~~~~~-~fL~~~~p~L~~~~~ww~~~~~~~~~g~~~~~~~~~~~G-~~l~~y~~~~~~prpesyr~d~~~~~~~~~~~ 265 (535)
T 2jg0_A 188 LAQHEGD-AALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDG-TLLNRYWDDRDTPRPESWVEDIATAKSNPNRP 265 (535)
T ss_dssp HHHHHTH-HHHHHHHHHHHHHHHHHTTTCTTCCTTEEETTEEECTTS-CEEECCCCSCCSCCGGGHHHHHHHHHTCTTSC
T ss_pred HHHcCCH-HHHHHHHHHHHHHHHHHHhCCcccCccccccceeecCCC-CcceeeccCCCCCCCcceeehhhhhhccccch
Confidence 9999986 89887 888888888644321100 000 00110 0 0
Q ss_pred -CCcccccc---------ccCCC--------------CcchhhHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHH
Q 013067 141 -GSCMIDRR---------MGIHG--------------HPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALS 196 (450)
Q Consensus 141 -g~twmD~~---------~pR~G--------------~pVEInALwYnAL~~~~~La~~~g~~~~~~~~~~~~~~~~~L~ 196 (450)
..+|||.+ .||++ .|||+||+||+|++.+++||+.+|+ .+.++++.++++.++
T Consensus 266 ~~~~y~~~~~~~eSGwD~s~R~~~~~~~l~~~~t~~i~~VDlnA~ly~a~~~la~lA~~lG~---~~~a~~~~~~A~~lk 342 (535)
T 2jg0_A 266 ATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGD---NAMANQYETLANARQ 342 (535)
T ss_dssp HHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGGGEECHHHHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCccccCCCCCcccccCCccchhhHHHHHHHHHHHHHHHHHHHhCC---hHHHHHHHHHHHHHH
Confidence 02344321 34533 6799999999999999999999984 555778899999999
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccccchhhhcccCCCCCCccccccccccCCCceeecc-cCCCccCcccccccchHHHhc
Q 013067 197 FHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGN-LQPAHMDFRFFTLGNLWSIVS 275 (450)
Q Consensus 197 ~~~~~~FW~~~~~~~~~~~~~~~~y~~~a~~~f~~~~~~ip~~l~~~~~~~~~Yl~~~-v~p~~~d~r~~~~gn~Lal~~ 275 (450)
++|+++||+++. |+++|. +..+.+ .+..+..+++++++
T Consensus 343 ~ai~~~fWdee~----------------------------------------G~y~D~~~~~~~~-~~~~~~s~~~PL~~ 381 (535)
T 2jg0_A 343 KGIEKYLWNDQQ----------------------------------------GWYADYDLKSHKV-RNQLTAAALFPLYV 381 (535)
T ss_dssp HHHHHHSEETTT----------------------------------------TEECCEETTTTEE-CCCCBGGGGHHHHT
T ss_pred HHHHHhCcCCCC----------------------------------------CEEEEEeCCCCCE-eeeehhhhHHHHhc
Confidence 999999996532 222221 111111 11355667788899
Q ss_pred cCCCHHHHHHHHHHHHHhhhhhhcCCCCccccCCCCCCCCccccCCCCCCCCCcccCCC-CchhhHHHHHHHHHHhCChH
Q 013067 276 SLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGG-SWPTLLWQFTLACIKMGRLG 354 (450)
Q Consensus 276 gll~~~qa~~V~~~v~~~~~~Lltp~gLR~L~P~~~d~~w~~~~~g~~~~rp~aYHNG~-VWP~l~g~~~~Al~r~G~~~ 354 (450)
++++++++++|++.+.+ +|++++|||++++ ++.+||+|+ |||+++++++.|+.++|..+
T Consensus 382 gi~~~e~a~~v~~~l~~---~l~t~~GlrT~s~-----------------~s~~yW~GpNvW~~~~~l~i~gL~~yG~~~ 441 (535)
T 2jg0_A 382 NAAAKDRANKMATATKT---HLLQPGGLNTTSV-----------------KSGQQWDAPNGWAPLQWVATEGLQNYGQKE 441 (535)
T ss_dssp TCSCHHHHHHHHHHHHH---HTEETTEECSBSC-----------------CCSSSSSTTEECHHHHHHHHHHHHTTTCHH
T ss_pred CCCCHHHHHHHHHHHHH---HhccCCCCCCCcC-----------------CCccccCCCCcchhHHHHHHHHHHHcCCHH
Confidence 99999999999999986 8999999999885 234899999 99999999999999999988
Q ss_pred HHHHHHHHHHhhC-----CCCCCcccccCCCCCccCCC----CChhhhHHHHHHHHHHHhhcC
Q 013067 355 LAQKAVALAENRL-----PLDHWPEYYDTRTGRFTGKQ----SRLFQTWTIAGFLTSKMLVEN 408 (450)
Q Consensus 355 ~A~~ll~~~~~~l-----~~~~~~E~FDG~~g~p~G~~----ac~~QAWSaA~~Lr~~~~l~~ 408 (450)
.|.++.......+ ..|.|+|+|||.++.+.|+. .+..|+||+|.+|++.....+
T Consensus 442 ~A~~la~~~l~~~~~~~~~~G~l~E~yd~~~~~~~G~ggeY~~~~~fgWT~av~l~ll~~y~~ 504 (535)
T 2jg0_A 442 VAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICP 504 (535)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHhccCCeeeeeECCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHhhh
Confidence 8887765432222 24899999999987666541 236999999999977665543
No 3
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=99.97 E-value=1.3e-29 Score=280.65 Aligned_cols=323 Identities=13% Similarity=0.082 Sum_probs=222.1
Q ss_pred hccCChHHHHHHHHhhccc-cccccCCCC-CCCCCCCcceeccccccccccccccCCCC-CCCCCCCcCCCCc-HHHHHH
Q 013067 19 KERGKSSGISSFILCNCSW-EKTVDCYSP-GQGLMPASFKVRNVPLESNKFEEVLDPDF-GESAIGRVAPVDS-GLWWII 94 (450)
Q Consensus 19 ~~~g~~e~~r~~L~~~qs~-~~~~d~~~~-~~Gl~Pn~fki~~~~~~~~~~~~~~~ad~-Ge~~~~~y~sVDa-tLWfi~ 94 (450)
+...++++++++|+.+... .+..|..++ ..|+||+.+. +.+ . ++. |+.+ .|++.++ +++|++
T Consensus 333 L~~~~~elAr~~L~~l~~~Q~~~~d~~r~~~~G~IP~~~~--~~~-----~-----p~r~g~~~--~~~~~~sqPPl~~~ 398 (761)
T 3c68_A 333 MAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIA--WNL-----S-----PERGGDGG--NWNERNTKPSLAAW 398 (761)
T ss_dssp HTTTCHHHHHHHHHHHHTTCCCTTCSSCGGGTTCCCSBBC--SSC-----C-----GGGTSCCS--SCBCSCCCCCCHHH
T ss_pred HHHcCHHHHHHHHHHHHHhhhhcccCCccCCCCEeeeeec--cCC-----c-----ccccCccc--cccCCCCCcHHHHH
Confidence 5577899999999965433 222444443 6799998651 101 0 111 2211 2444333 588899
Q ss_pred HHHHHHHHhCChhhhcc--hhHHHHHHHHHHhhh--cCCCCCCCcc-----cccCC------------------------
Q 013067 95 LLRAYGKITGDYALQER--VDVQTGIKLIMNLCL--ADGFDMFPSL-----LVTDG------------------------ 141 (450)
Q Consensus 95 al~~Y~~~TgD~~f~~~--p~l~~~i~~i~~~~~--~~~~~~~~~L-----~~~dg------------------------ 141 (450)
++++|+++|||.+|+++ |.+++.++|+.+... ++|...+... -.+.|
T Consensus 399 av~~yy~~tgD~~fL~e~~P~L~~~~~w~~~~rd~d~~GL~~y~~~~~~~~~~prge~~~~d~~~~~~~~~~g~~~~~~~ 478 (761)
T 3c68_A 399 SVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARV 478 (761)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSCTTCSSCCCCEEECCTTTBCTTSCBEEEEEETTEEEEEECHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCCCCcCccEEecccccccccCCCcchhccccccccchhcccccccchh
Confidence 99999999999999998 999999999877643 2333221000 00011
Q ss_pred -------------------Cccccccc--------------------------------cCCCC---------cchhhHH
Q 013067 142 -------------------SCMIDRRM--------------------------------GIHGH---------PLEIQAL 161 (450)
Q Consensus 142 -------------------~twmD~~~--------------------------------pR~G~---------pVEInAL 161 (450)
-++||. . ++.|. +|++||+
T Consensus 479 l~~~~~~~~~~~~~~~a~weSG~D~-s~rw~~~~~~~~~~y~~~~~~~~~w~~~~~~n~~~~G~l~~~~~~~~~VdlnA~ 557 (761)
T 3c68_A 479 VEKGQYDSLEIPAQVAASWESGRDD-AAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASY 557 (761)
T ss_dssp HHHTCSSEEECHHHHHHHHHHTCTT-CGGGTCCCHHHHHHHHHTTCCGGGGCCCEEEEECTTCCEEEEEESEECHHHHHH
T ss_pred ccccccccchhhhhhhccccCCCCc-chhccccccccccccccccccccchhhhhccccccccccccCcccccCHHHHHH
Confidence 123431 1 23344 8999999
Q ss_pred HHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhhcccCCCCCCcccccc
Q 013067 162 FYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLM 241 (450)
Q Consensus 162 wYnAL~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~~~~~~~~~~~~~~~y~~~a~~~f~~~~~~ip~~l~ 241 (450)
||.|++.+++||+.+|+ .+.++.+.++++.+++.|+++||.++.+.+..|....
T Consensus 558 ly~al~~lA~lA~~LG~---~e~A~~y~~~A~~lk~ai~~~fWd~e~G~y~D~~~~~----------------------- 611 (761)
T 3c68_A 558 MYSDNHYLAEMATILGK---PEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIED----------------------- 611 (761)
T ss_dssp HHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHHTEETTTTEECCEECCS-----------------------
T ss_pred HHHHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHhCcCccCCEEEEEecCC-----------------------
Confidence 99999999999999984 5557788899999999999999976432110000000
Q ss_pred ccccCC-CceeecccCCCccCcccccccchHHHhccCCCHHHHHHHHHHHHHhhhhhhcCCCCccccCCCCCCCCccccC
Q 013067 242 DWIPEE-GGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITG 320 (450)
Q Consensus 242 ~~~~~~-~~Yl~~~v~p~~~d~r~~~~gn~Lal~~gll~~~qa~~V~~~v~~~~~~Lltp~gLR~L~P~~~d~~w~~~~~ 320 (450)
.. +....+.+.++ +.+..+|++++++++++++++++|++.+.+. ++|.+++|+|+++| .+
T Consensus 612 ----~~~~~~~~g~~~sn----~~~~~s~~~pL~~Gl~~~e~a~~vl~~L~~~-~~l~t~~Girtls~--~~-------- 672 (761)
T 3c68_A 612 ----KPLANGCAGKPIVE----RGKGPEGWSPLFNGAATQANADAVVKVMLDP-KEFNTFVPLGTAAL--TN-------- 672 (761)
T ss_dssp ----SCCTTSCSSCBCGG----GCCCGGGGHHHHTTCSCHHHHHHHHHHHTCT-TTTCCSSCSCSSCT--TC--------
T ss_pred ----Cccccccccceeec----chhhHHHHHHHHcCCCCHHHHHHHHHHHhCh-hhhcCCCCccccCC--CC--------
Confidence 00 00000000000 1234567888999999999999999999752 25889999999999 44
Q ss_pred CCCCCCCCcccCCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHh----hCCCCCCcccccCCCCCccCCCCChhhhHHH
Q 013067 321 SDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAEN----RLPLDHWPEYYDTRTGRFTGKQSRLFQTWTI 396 (450)
Q Consensus 321 g~~~~rp~aYHNG~VWP~l~g~~~~Al~r~G~~~~A~~ll~~~~~----~l~~~~~~E~FDG~~g~p~G~~ac~~QAWSa 396 (450)
+.++|.+||||+|||.++++++.|+.++|+.+.|.+++..... ....|.++|.||+.+|.|.|+ .+|+||+
T Consensus 673 --p~y~p~~yw~GpvW~~~~~lli~aL~~~G~~d~A~~l~~~~~~~~~~~~~~G~~~E~yd~~tg~p~G~---~~fgWSa 747 (761)
T 3c68_A 673 --PAFGADIYWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGA---PNFSWSA 747 (761)
T ss_dssp --TTCCTTCTTTTCEEHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTTTSSSCCCSEECTTTCCEESC---SSCHHHH
T ss_pred --cccCCCccccCCcccchHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCceeeEecCCCCCcCcC---CCchHHH
Confidence 3456789999999998899999999999999999998875533 234689999999999888755 4999999
Q ss_pred HHHHHHHHhh
Q 013067 397 AGFLTSKMLV 406 (450)
Q Consensus 397 A~~Lr~~~~l 406 (450)
|.+|++....
T Consensus 748 a~~l~ll~~y 757 (761)
T 3c68_A 748 AHLYMLYNDF 757 (761)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9988886543
No 4
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=99.97 E-value=7.2e-30 Score=284.67 Aligned_cols=326 Identities=15% Similarity=0.156 Sum_probs=226.3
Q ss_pred HHHH-hccCChHHHHHHHHhhccccccccCCCCCCCCCCCcceeccccccccccccccCCCCCCCCCCCcCCCCcHHHHH
Q 013067 15 LSCL-KERGKSSGISSFILCNCSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWI 93 (450)
Q Consensus 15 ~~~~-~~~g~~e~~r~~L~~~qs~~~~~d~~~~~~Gl~Pn~fki~~~~~~~~~~~~~~~ad~Ge~~~~~y~sVDatLWfi 93 (450)
..|+ ++...||++|+.|..+.+.. . .+|.+|+.+. |.. + .|...+ .++.+|.+||+|
T Consensus 364 qd~~~~~~~~p~~~r~~il~~~~~Q------~-~dG~~~h~~~----p~~---~-------~g~~~~-~~~~~D~~lW~i 421 (811)
T 3qde_A 364 QDLLGFVHQIPERARERLLDLAATQ------L-EDGSAYHQYQ----PLT---K-------KGNNEI-GSNFNDDPLWLI 421 (811)
T ss_dssp HHHHTTTTTCHHHHHHHHHHHHTTB------C-TTSCBCSEEC----TTT---C-------CEECTT-CCCBTTHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhhc------c-cCCCccceec----CCC---C-------CCCCCC-CCCcccchhHHH
Confidence 3445 55668999999888554433 2 6799998772 210 1 121111 156799999999
Q ss_pred HHHHHHHHHhCChhhhcc--h-------------hHHHHHHHHHHhhhcCCCCCCCcccccCCCcccccc----------
Q 013067 94 ILLRAYGKITGDYALQER--V-------------DVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRR---------- 148 (450)
Q Consensus 94 ~al~~Y~~~TgD~~f~~~--p-------------~l~~~i~~i~~~~~~~~~~~~~~L~~~dg~twmD~~---------- 148 (450)
+++++|++.|||.+|+++ | +++++++++++.. + ..||......+|+|+.
T Consensus 422 ~av~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~-----g-~~GL~~~g~~DWnD~ln~~~~~~~vg 495 (811)
T 3qde_A 422 LATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNNL-----G-PHGLPLIGRADWNDCLNLNCFSTVPD 495 (811)
T ss_dssp HHHHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTCB-----C-TTSSBBCBTCSSSTTCCSSCCCCCTT
T ss_pred HHHHHHHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhcC-----C-CCCCcccccCCchhhccccccccccC
Confidence 999999999999999975 3 5666666554321 1 1334333445788842
Q ss_pred ------cc---CCCCcchhhHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc
Q 013067 149 ------MG---IHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTE 219 (450)
Q Consensus 149 ------~p---R~G~pVEInALwYnAL~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~~~~~~~~~~~~~~ 219 (450)
+| +.|.+|++|+|||+||+.+++||+.+|+ .+.++.++++++.|+++|+++||.. +
T Consensus 496 ~~~~~vtp~~~~~gesv~~~al~y~AL~~~a~lA~~lGd---~~~A~~~~~~A~~lk~a~~~~~Wdg-~----------- 560 (811)
T 3qde_A 496 ESFQTTTSKDGKVAESVMIAGMFVFIGKDYVKLCEYMGL---EEEARKAQQHIDAMKEAILKYGYDG-E----------- 560 (811)
T ss_dssp SCTTTSCCCCCSSCEEHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHHSBCS-S-----------
T ss_pred ccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHHhccCc-C-----------
Confidence 23 6899999999999999999999999984 6668889999999999999999953 1
Q ss_pred ccchhhhcccCCCCCCccccccccccCCCceeecccCCCccCcccccccchHHHhccCCCHH-HHHHHHHHHHHhhhhhh
Q 013067 220 EYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPK-QNESILNLIEAKWDDLV 298 (450)
Q Consensus 220 ~y~~~a~~~f~~~~~~ip~~l~~~~~~~~~Yl~~~v~p~~~d~r~~~~gn~Lal~~gll~~~-qa~~V~~~v~~~~~~Ll 298 (450)
|..+.+..+|.- +++.. + ..-++++.++..++++|+++++ |++++++.|.+ +|+
T Consensus 561 -------------------~y~ra~~~dg~~-~gs~~-~-~~~qi~~~~q~~avlsGia~~e~ra~~~m~~v~~---~L~ 615 (811)
T 3qde_A 561 -------------------WFLRAYDDFGRK-VGSKE-N-EEGKIFIESQGFCVMAEIGLEDGKALKALDSVKK---YLD 615 (811)
T ss_dssp -------------------SBCCEECTTSCE-ESSTT-S-SSCCEESHHHHHHHHTTCSSSSSHHHHHHHHHHH---HHC
T ss_pred -------------------eEEEEEcCCCCC-CCccC-C-CCceEEecchhHHHHhCCCCchHHHHHHHHHHHH---HhC
Confidence 111222222211 11110 0 1223567777778899999999 99999999988 899
Q ss_pred cCCCCccccCCCCCCCCccccCCCCCCCCCcccCCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHhh-CC-----CCCC
Q 013067 299 GHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENR-LP-----LDHW 372 (450)
Q Consensus 299 tp~gLR~L~P~~~d~~w~~~~~g~~~~rp~aYHNG~VWP~l~g~~~~Al~r~G~~~~A~~ll~~~~~~-l~-----~~~~ 372 (450)
+|+|||+++|+.....+.+ +....|.|..||||++|||.+..++.|++++|+.++|.+++..+... .. ....
T Consensus 616 t~~Glrll~p~f~~~~~d~--g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~~~~~~~~~~~~~ 693 (811)
T 3qde_A 616 TPYGLVLQNPAFTRYYIEY--GEISTYPPGYKENAGIFCHNNAWIICAETVVGRGDMAFDYYRKIAPAYIEDVSDIHKLE 693 (811)
T ss_dssp CTTCCCSEESCCCSCCTTT--GGGGTSCTTSTTTTCEEHHHHHHHHHHHHHTTCHHHHHHHHHHHCGGGSGGGHHHHCSC
T ss_pred CCcceEeecCCccccCCCC--CceeccCCCccccccccchHHHHHHHHHHHcCCHHHHHHHHHHhChhhhcchhhhcCcC
Confidence 9999999999753221111 12234788899999999999999999999999999999998875332 11 3588
Q ss_pred cccccCCC-CCccCCCCChhhhHHHHH---HHHH--HHhhc-CCC
Q 013067 373 PEYYDTRT-GRFTGKQSRLFQTWTIAG---FLTS--KMLVE-NPE 410 (450)
Q Consensus 373 ~E~FDG~~-g~p~G~~ac~~QAWSaA~---~Lr~--~~~l~-~p~ 410 (450)
||.|+++. +......||..|+|..|. ++++ +.+|. +|+
T Consensus 694 Py~~~~~~~~~~~p~~Gr~~~~w~tGsa~w~~~~~ve~~lGl~~~ 738 (811)
T 3qde_A 694 PYVYAQMVAGKDAKRHGEAKNSWLTGTAAWNFVAISQWILGVKPD 738 (811)
T ss_dssp TTSCEEEECCTTSTTTTCEEEESCSTHHHHHHHHHHHTTSCEEEE
T ss_pred cEEeccccccccCCCCCCCcchhHHHHHHHHHHHHHHHhceeEEE
Confidence 99998865 210112466799996544 3333 44555 454
No 5
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=99.97 E-value=7.5e-30 Score=284.76 Aligned_cols=323 Identities=17% Similarity=0.152 Sum_probs=224.7
Q ss_pred hccCChHHHHHHHHhhccccccccCCCCCCCCCCCcceeccccccccccccccCCCCCCCCCCCcCCCCcHHHHHHHHHH
Q 013067 19 KERGKSSGISSFILCNCSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRA 98 (450)
Q Consensus 19 ~~~g~~e~~r~~L~~~qs~~~~~d~~~~~~Gl~Pn~fki~~~~~~~~~~~~~~~ad~Ge~~~~~y~sVDatLWfi~al~~ 98 (450)
++...||++|+.|..+.+.. . .+|.+|+.+. |.. ++ |...+ .++.+|.+||+|+++++
T Consensus 376 ~~~~~pe~ar~~il~~~~~Q------~-~dG~v~h~~~----p~~---~~-------g~~~~-~~~~~D~~lWl~~av~~ 433 (822)
T 3rrs_A 376 FVHLIPERARERIIDIASTQ------F-ADGSAYHQYQ----PLT---KR-------GNNDI-GSGFNDDPLWLIAGTAA 433 (822)
T ss_dssp HTTTCHHHHHHHHHHHHTTC------C-TTSCCCSEEE----TTT---TE-------ECTTT-CSCBTTHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhh------c-ccCcccceec----CcC---CC-------CccCC-CCcccchHhHHHHHHHH
Confidence 44568999999988554433 2 6799998773 310 11 21111 14679999999999999
Q ss_pred HHHHhCChhhhcc--h-------------hHHHHHHHHHHhhhcCCCCCCCcccccCCCcccccc---------------
Q 013067 99 YGKITGDYALQER--V-------------DVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRR--------------- 148 (450)
Q Consensus 99 Y~~~TgD~~f~~~--p-------------~l~~~i~~i~~~~~~~~~~~~~~L~~~dg~twmD~~--------------- 148 (450)
|++.|||.+|+++ | ++.++++++++... ..||.-....+|+|..
T Consensus 434 Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~g------~~GLp~~g~gDWnD~ln~~~~~~~vg~~~~~ 507 (822)
T 3rrs_A 434 YIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTHRG------PHGLPLIGRADWNDCLNLNCFSTTPGESFQT 507 (822)
T ss_dssp HHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHSBC------TTSSBBCBTCSSSTTCCTTCCCCSTTCCTTT
T ss_pred HHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhcCC------CCCCcccCCCcchhhcccccccccccccccc
Confidence 9999999999986 4 56666776654221 1233333345787742
Q ss_pred -cc---CCCCcchhhHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchh
Q 013067 149 -MG---IHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTD 224 (450)
Q Consensus 149 -~p---R~G~pVEInALwYnAL~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~~~~~~~~~~~~~~~y~~~ 224 (450)
+| +.|.+||+|+|||+||+.+++||+.+|+ .+.++.++++++.|+++|+++||...
T Consensus 508 ~~p~~~~~Gesv~~~al~y~AL~~~a~lA~~~G~---~~~A~~~~~~A~~lk~a~~~~~Wdg~----------------- 567 (822)
T 3rrs_A 508 TENQAGGVAESTFIAAQFVLYGEQYAELAARRGL---ADVADRARGHVAEMRDALLTDGWDGS----------------- 567 (822)
T ss_dssp CCSSCCCCCEEHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHTTTBCSS-----------------
T ss_pred cccccCCccccHHHHHHHHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHHHHHHHHhccCcc-----------------
Confidence 22 7899999999999999999999999984 66688899999999999999999431
Q ss_pred hhcccCCCCCCccccccccccCCCceeecccCCCccCcccccccchHHHhccCCCHH-------HHHHHHHHHHHhhhhh
Q 013067 225 ATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPK-------QNESILNLIEAKWDDL 297 (450)
Q Consensus 225 a~~~f~~~~~~ip~~l~~~~~~~~~Yl~~~v~p~~~d~r~~~~gn~Lal~~gll~~~-------qa~~V~~~v~~~~~~L 297 (450)
|..+.+..+|.- +++.. ...-++++.++..++++|+++++ |++++++.|.+ +|
T Consensus 568 --------------~y~ra~d~dg~~-~gs~~--~~~~~i~~~~q~~avlsGia~~e~~~~~~~~a~~al~~v~~---~L 627 (822)
T 3rrs_A 568 --------------WFLRAYDYYGNP-IGTDA--HDEGKIWIEPQGFAVMAGVGVGEGPQDTDAPAIKALDSVNE---ML 627 (822)
T ss_dssp --------------SBCCEECTTSCE-ESCTT--SSSCCEEHHHHHHHHHTTTTCCSSTTCTTSHHHHHHHHHHH---HT
T ss_pred --------------eeEEEEcCCCCC-ccccC--CCCceEEeccchhHhhcCCCCcccccchHHHHHHHHHHHHH---Hc
Confidence 111222222211 11110 01123566677678899999999 99999999988 89
Q ss_pred hcCCCCccccCCCCCCCCccccCCCCCCCCCcccCCCCchhhHHHHHHHHHHhCChHHHHHHHHHHH--hhC----CCCC
Q 013067 298 VGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAE--NRL----PLDH 371 (450)
Q Consensus 298 ltp~gLR~L~P~~~d~~w~~~~~g~~~~rp~aYHNG~VWP~l~g~~~~Al~r~G~~~~A~~ll~~~~--~~l----~~~~ 371 (450)
++|+|||+++|+.. .+....+....|.|..||||++|||.+..++.|++++|+.++|.+++..+. .+- ....
T Consensus 628 ~t~~Girll~p~f~--~~~~~~g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~~~~~~~~~~~~ 705 (822)
T 3rrs_A 628 ATDHGMVLQYPAYT--TYQVHMGEVSTYPPGYKENGGIFCHNNPWVIIAETVVGRGGRAFDYYKRITPAYREDISDVHRL 705 (822)
T ss_dssp EETTEEBSEESCCS--SCCTTSTTGGGSCTTBTTBTCEETTTHHHHHHHHHHHTCHHHHHHHHHHHCHHHHGGGHHHHCS
T ss_pred CCCCeEEEcCCCcc--cccCCCCcccccCCCccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhCcccccchhHhhcc
Confidence 99999999999743 111112233457888999999999999999999999999999999888642 121 2358
Q ss_pred CcccccCCC-CCccCCCCChhhhHHHHHH---HH--HHHhhc-CCCc
Q 013067 372 WPEYYDTRT-GRFTGKQSRLFQTWTIAGF---LT--SKMLVE-NPEM 411 (450)
Q Consensus 372 ~~E~FDG~~-g~p~G~~ac~~QAWSaA~~---Lr--~~~~l~-~p~~ 411 (450)
.||+|+++. +......||..|+|..|.. ++ ++.+|. +|+.
T Consensus 706 ~Py~~~~~~~~~~~p~~G~~~~~w~tGsa~w~~~~lve~~LGlr~~~ 752 (822)
T 3rrs_A 706 EPYVYAQMIAGKEAVRHGEAKNSWLTGTAAWNFVTVSQYLLGVRPEY 752 (822)
T ss_dssp CSSSCEEEECCTTSTTTTCEEEESSSTHHHHHHHHHHHTTSCEEECS
T ss_pred CcEEEeccccccCCCCCCCccchhhhhhHHHHHHHHHHhEEeEEEEC
Confidence 899998865 2101124677999965543 23 344555 5543
No 6
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=99.96 E-value=1.2e-28 Score=273.92 Aligned_cols=336 Identities=13% Similarity=0.082 Sum_probs=221.1
Q ss_pred HHHH-hccCChHHHHHHHHhhccccccccCCCCCCC-CCCCcceeccccccccccccc------cCCCCCC----CCCCC
Q 013067 15 LSCL-KERGKSSGISSFILCNCSWEKTVDCYSPGQG-LMPASFKVRNVPLESNKFEEV------LDPDFGE----SAIGR 82 (450)
Q Consensus 15 ~~~~-~~~g~~e~~r~~L~~~qs~~~~~d~~~~~~G-l~Pn~fki~~~~~~~~~~~~~------~~ad~Ge----~~~~~ 82 (450)
.+++ ++.++|+++|++|+.+.+.. . .+| ++|+.++..++| +.|+.- +..+.|+ .++ .
T Consensus 353 ~~~~~l~~~~p~~ar~~l~~~~~~Q------~-~~G~~~p~~~p~~~~~---~~g~~~~~~~~~~~g~~~~~~~~~g~-~ 421 (807)
T 1v7w_A 353 QDAISVPHANPEMTRKRIVDLLRGQ------V-KAGYGLHLFDPDWFDP---EKEDVAPSKSPTVVPTPSDEDKIHGI-K 421 (807)
T ss_dssp HHTTSCTTTCHHHHHHHHHHHHHTB------C-TTSCBCSEECGGGGCC-------------------------CCCG-G
T ss_pred HHHHHHhhcCHHHHHHHHHHHHhcc------c-cCCCcceeeeeccccc---cccccCCccccccccCCCcchhhcCC-C
Confidence 3444 66999999999999664322 2 456 688766322211 111100 0000111 111 1
Q ss_pred cCCCCcHHHHHHHHHHHHHHhCChhhhcc--hh-----------HHHHHHHHHHhhhcCCCCCCCcccccCCCccccccc
Q 013067 83 VAPVDSGLWWIILLRAYGKITGDYALQER--VD-----------VQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRM 149 (450)
Q Consensus 83 y~sVDatLWfi~al~~Y~~~TgD~~f~~~--p~-----------l~~~i~~i~~~~~~~~~~~~~~L~~~dg~twmD~~~ 149 (450)
....|+++||++++++|+++|||.+|+++ |. ++++++|++..... .||+......|+|...
T Consensus 422 ~~~~D~~lw~~~~~~~y~~~tGD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~~~~------~GL~~~~~~DW~D~~~ 495 (807)
T 1v7w_A 422 DTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVGQ------TGICKGLRADWNDCLN 495 (807)
T ss_dssp GCBSSGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHSBCT------TSCBEEETCSSSTTCC
T ss_pred CCccchhhHHHHHHHHHHHHhCCHHHHhcccccccCCcchHHHHHHHHHHHHHhcCCC------CCCcccCCCCCCCcCC
Confidence 22239999999999999999999999998 74 88888888664322 2333334458977443
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhhccc
Q 013067 150 GIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKF 229 (450)
Q Consensus 150 pR~G~pVEInALwYnAL~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~~~~~~~~~~~~~~~y~~~a~~~f 229 (450)
++.|++||+|||||+||+.+++||+.+|+ .+.++.++++++.|++.|+++||.++.. .|
T Consensus 496 ~~~g~~v~~~a~~y~al~~~a~la~~lG~---~~~a~~~~~~A~~lk~~~~~~~w~~~~~------------------~f 554 (807)
T 1v7w_A 496 LGGGESSMVSFLHFWALQEFIDLAKFLGK---DQDVNTYTEMAANVREACETHLWDDEGG------------------WY 554 (807)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHHSEETTTT------------------EE
T ss_pred CCCCeehhHHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHHhccCCCCC------------------ee
Confidence 34899999999999999999999999984 5557888999999999999999975321 11
Q ss_pred CCCCCCccccccccccCCCceeecccCCCccCcccccccchHHHhccCCCHHHHHHHHHHHHHhhhhhhcCCCCccccCC
Q 013067 230 NIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPA 309 (450)
Q Consensus 230 ~~~~~~ip~~l~~~~~~~~~Yl~~~v~p~~~d~r~~~~gn~Lal~~gll~~~qa~~V~~~v~~~~~~Lltp~gLR~L~P~ 309 (450)
.+.+..++..+ ++. ...+.+++..+|.+++++|+++++|++++++.|.+ +|.+++|+|+++|+
T Consensus 555 -----------~~~~~~d~~~~-g~~--~~~~~~~~~~~~~~al~~g~~~~e~a~~~l~~v~~---~L~~~~G~~~~~p~ 617 (807)
T 1v7w_A 555 -----------IRGLTKNGDKI-GTA--QQQEGRVHLESNTLAVLSGLASQERGEQAMDAVDE---HLFSPYGLHLNAPS 617 (807)
T ss_dssp -----------CCEECTTSCEE-SCT--TCSSCCEEHHHHHHHHHTTCSCHHHHHHHHHHHHH---HHEETTEECSEESC
T ss_pred -----------eeeeccCCCCc-CCc--cCCCCcCcccchHHHHhhCCCCHHHHHHHHHHHHH---hcCCCCceeecCCc
Confidence 01111111111 110 00122456778888889999999999999999988 79899999999997
Q ss_pred CCCCCCccccCCCCCCCCCcccCCCCchhhHHHHHHHHHHhCChHHHHHHHHHHH--hhC--------CCCCCcccccCC
Q 013067 310 LESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAE--NRL--------PLDHWPEYYDTR 379 (450)
Q Consensus 310 ~~d~~w~~~~~g~~~~rp~aYHNG~VWP~l~g~~~~Al~r~G~~~~A~~ll~~~~--~~l--------~~~~~~E~FDG~ 379 (450)
... +....++-..+.|..||||++|||.+..++.|+.++|+.++|.+++..+. .+. +.+.+.+..+|.
T Consensus 618 ~~~--~~~~~g~~~~y~~~~~enG~~~~~~~~w~~~al~~~G~~d~A~~l~~~~~p~~~~~~~~~~~~ep~~~~~~~~~~ 695 (807)
T 1v7w_A 618 FST--PNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKLGRGDRAMKFYDALNPYNQNDIIEKRIAEPYSYVQFIMGR 695 (807)
T ss_dssp CCS--CCTTTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHTTCHHHHHHHHHHHCGGGGTTCHHHHCSCTTSCEEEECCT
T ss_pred ccc--cCcCCceeeccCCccccccccccchHHHHHHHHHHcCCHHHHHHHHHHhChhhhhhhhhhhccCcccccccccCc
Confidence 531 11111222346778899999999999999999999999999999988652 111 112233233332
Q ss_pred CCCccCCCCChhhhH---HHHHHHHH--HHhhc-CCC
Q 013067 380 TGRFTGKQSRLFQTW---TIAGFLTS--KMLVE-NPE 410 (450)
Q Consensus 380 ~g~p~G~~ac~~QAW---SaA~~Lr~--~~~l~-~p~ 410 (450)
.+ |...++ .|+| |++.++++ ..++. +|.
T Consensus 696 ~~-~~~~~~--~~aW~~gsa~w~~~~l~~~~lGi~p~ 729 (807)
T 1v7w_A 696 DH-QDHGRA--NHPWLTGTSGWAYFAVTNYILGVQSG 729 (807)
T ss_dssp TS-TTTTCE--EEESSCTHHHHHHHHHHHTTSCEECC
T ss_pred cC-CCCCCc--CCcccccHHHHHHHHHHHHheeeeee
Confidence 22 322234 4999 87777653 34555 665
No 7
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=99.87 E-value=1.2e-20 Score=213.65 Aligned_cols=283 Identities=14% Similarity=0.128 Sum_probs=198.0
Q ss_pred HHHHhccCChHHHHHHHHhhccccccccCCCCCCCCCCCcceeccccccccccccccCCCCCCCCCCCcCCCCcHHHHHH
Q 013067 15 LSCLKERGKSSGISSFILCNCSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWII 94 (450)
Q Consensus 15 ~~~~~~~g~~e~~r~~L~~~qs~~~~~d~~~~~~Gl~Pn~fki~~~~~~~~~~~~~~~ad~Ge~~~~~y~sVDatLWfi~ 94 (450)
++.+...|.++.+++.|..+.... . .+|++|+.+ | +.. ..+..|.++||++
T Consensus 585 ~~~l~~~g~~~lar~~L~~l~~~Q------~-~dG~ip~~~-----p------------~~~-----~~~~~~~~~~~i~ 635 (956)
T 2okx_A 585 LVNYYVFGETEIVERCLNLVPGSA------D-ETPLYLDQV-----P------------SAW-----SSVIPNWTFFWIL 635 (956)
T ss_dssp HHHHHHTCCCHHHHHHHHHGGGGT------T-TCTTCCSBS-----S------------CSS-----CCCCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhc------c-cCCCcCccc-----c------------ccc-----cCCCcChHHHHHH
Confidence 445567889999999999664322 2 579999866 3 111 1356789999999
Q ss_pred HHHHHHHHhCChhhhcc--hhHHHHHHHHHHhhhcCCCCCCCcccc-c--CCCccccccccCCCCcchhhHHHHHHHHHH
Q 013067 95 LLRAYGKITGDYALQER--VDVQTGIKLIMNLCLADGFDMFPSLLV-T--DGSCMIDRRMGIHGHPLEIQALFYTALRCS 169 (450)
Q Consensus 95 al~~Y~~~TgD~~f~~~--p~l~~~i~~i~~~~~~~~~~~~~~L~~-~--dg~twmD~~~pR~G~pVEInALwYnAL~~~ 169 (450)
++++|+++|||.+|+++ |.++++++|+.+....+ |++. + +-..|.|..-|+.|.++..|+++|.||+.+
T Consensus 636 ~~~~yy~~tGD~~~L~e~yp~lk~~l~~~~~~~d~~------GLl~~~~~~~~DW~d~~~~~~G~~~~~~a~~~~al~~~ 709 (956)
T 2okx_A 636 ACREYAAHTGNEAFAARIWPAVKHTLTHYLEHIDDS------GLLNMAGWNLLDWAPIDQPNEGIVTHQNLFLVKALRDS 709 (956)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTBCTT------SSBCCSSCCCCCSSSCCCCSSSEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCC------CCEEeCCCCccCccCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999998 99999999886543222 3332 1 124787743378899999999999999999
Q ss_pred HHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhhcccCCCCCCccccccccccCCCc
Q 013067 170 REMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGG 249 (450)
Q Consensus 170 ~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~~~~~~~~~~~~~~~y~~~a~~~f~~~~~~ip~~l~~~~~~~~~ 249 (450)
++||+.+|+ .+.++++++++++|++.|+++||.++.+
T Consensus 710 a~lA~~LG~---~~~a~~y~~~A~~lk~ai~~~~wd~~~g---------------------------------------- 746 (956)
T 2okx_A 710 RALAAAAGA---TEEADAFAARADLLAETINAVLWDEEKR---------------------------------------- 746 (956)
T ss_dssp HHHHHHTTC---GGGGHHHHHHHHHHHHHHHHHSEETTTT----------------------------------------
T ss_pred HHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHhcCCCCC----------------------------------------
Confidence 999999984 3335677888999999999999965321
Q ss_pred eeecccCCCc-cCcccccccchHHHhccCCCHHHHHHHHHHHHHhhhhhhcCCCCccccCCCCCCCCccccCCCCCCCCC
Q 013067 250 YLIGNLQPAH-MDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPW 328 (450)
Q Consensus 250 Yl~~~v~p~~-~d~r~~~~gn~Lal~~gll~~~qa~~V~~~v~~~~~~Lltp~gLR~L~P~~~d~~w~~~~~g~~~~rp~ 328 (450)
++.+.+++.. .....+..+|++++++|+++++++++| + +|+.+ . |.
T Consensus 747 ~y~d~~~~~g~~~~~~~~~s~~lall~Gl~p~~~~~av-~-------~Ll~~-----------~--------------~~ 793 (956)
T 2okx_A 747 AYIDCIHADGRRSDVYSMQTQVVAYLCGVAQGEREAVI-E-------GYLSS-----------P--------------PP 793 (956)
T ss_dssp EECSEECTTSCBCCCCBHHHHHHHHHTTCSCHHHHHHH-H-------HHHHS-----------C--------------CT
T ss_pred EEEeeecCCCCcccccccHHHHHHHHhCCCCHHHHHHH-H-------HHhcC-----------C--------------Cc
Confidence 1112111110 011123446778899999999998777 3 34321 0 34
Q ss_pred cccC-CCCchhhHHHHHHHHHHhCChHHHHHHHHHH---HhhCCCCCCcccccCCCCCcc---CCCCChhhhHHHHHHHH
Q 013067 329 SYHN-GGSWPTLLWQFTLACIKMGRLGLAQKAVALA---ENRLPLDHWPEYYDTRTGRFT---GKQSRLFQTWTIAGFLT 401 (450)
Q Consensus 329 aYHN-G~VWP~l~g~~~~Al~r~G~~~~A~~ll~~~---~~~l~~~~~~E~FDG~~g~p~---G~~ac~~QAWSaA~~Lr 401 (450)
.||+ |++||+ +.++.|+.++|+.+.|.+++... ......++++|.||+.++... +...+..|+||+|....
T Consensus 794 gy~~~Gt~w~~--~~li~aLar~G~~d~A~~ll~~~~~~~~~~g~tt~~E~~d~~~~~~~~~~~~~~s~nh~Wsag~~~~ 871 (956)
T 2okx_A 794 AFVQIGSPFMS--FFYYEALEKAGRQTLMLDDIRRNYGQMLRYDATTCWEMYPNFAENRSNPDMLTRSHCHAWSAAPGYF 871 (956)
T ss_dssp TSBCCCSHHHH--HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCSSCCSSCSSCCTTSSSTTSSCSCSCCGGGCTHHHH
T ss_pred ccccCCChhHH--HHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCccceeccCCCCCcccCCCcccccCcHHHHHHHHH
Confidence 6887 999987 88999999999999999998643 223445689999998663211 11123469999988655
Q ss_pred HHH-hhc-CCC
Q 013067 402 SKM-LVE-NPE 410 (450)
Q Consensus 402 ~~~-~l~-~p~ 410 (450)
+.+ ++. +|.
T Consensus 872 L~q~l~GI~p~ 882 (956)
T 2okx_A 872 LGSSILGVKRG 882 (956)
T ss_dssp HHHTTSCEEEC
T ss_pred HHHHhcCcccc
Confidence 544 444 443
No 8
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.86 E-value=5.5e-21 Score=211.14 Aligned_cols=242 Identities=15% Similarity=0.183 Sum_probs=171.8
Q ss_pred cCC-CCcHHHHHHHHHHHHHHhCChhhhcc--hhHHHHHHHHHHhhhcCCCCCCCcccc-cC----CCccccccccCCCC
Q 013067 83 VAP-VDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLCLADGFDMFPSLLV-TD----GSCMIDRRMGIHGH 154 (450)
Q Consensus 83 y~s-VDatLWfi~al~~Y~~~TgD~~f~~~--p~l~~~i~~i~~~~~~~~~~~~~~L~~-~d----g~twmD~~~pR~G~ 154 (450)
|++ +|.++||++++++|+++|||.+|+++ |.++++++|+......+ ||+. .. -.+|+|..+++.|.
T Consensus 379 ~~~~~d~~l~wi~~~~~yy~~tGD~~~L~e~~p~l~~~ld~~~~~~d~~------GL~~~~~G~W~~~dW~d~~~~~~G~ 452 (739)
T 3cih_A 379 SNTIMDYTFYWFLSVYDYYMYSGDRHFVNQLYPRMQTMMDYVLGRTNKN------GMVEGMSGDWVFVDWADGYLDKKGE 452 (739)
T ss_dssp GGGBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTBCTT------SCBCCCTTCBCCSCCCTTCCCCSSE
T ss_pred cCCccchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC------CCcccCCCCcccCCCcccccCCCCc
Confidence 344 79999999999999999999999998 98999988886543222 2221 11 25899966899999
Q ss_pred cchhhHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhhcccCCCCC
Q 013067 155 PLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPE 234 (450)
Q Consensus 155 pVEInALwYnAL~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~~~~~~~~~~~~~~~y~~~a~~~f~~~~~ 234 (450)
++++||++|.||+.+++||+.+|+ .+.++++++++++|+++|+++||.++.
T Consensus 453 ~~~~~a~~y~al~~~a~lA~~lG~---~~~A~~y~~~A~~lk~a~~~~~wd~~~-------------------------- 503 (739)
T 3cih_A 453 LSFEQVLFCRSLETMALCADLVGD---KDGQQKYEKLASALKAKLEPTFWNNQK-------------------------- 503 (739)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHHHEETTT--------------------------
T ss_pred chHHHHHHHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHHHHHHHHhccCccc--------------------------
Confidence 999999999999999999999984 555788899999999999999996421
Q ss_pred CccccccccccCCCceeecccCCCccCcccccccchHHHhccCCCHHHHHHHHHHHHHhhhhhhcCCCCccccCCCCCCC
Q 013067 235 QIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESED 314 (450)
Q Consensus 235 ~ip~~l~~~~~~~~~Yl~~~v~p~~~d~r~~~~gn~Lal~~gll~~~qa~~V~~~v~~~~~~Lltp~gLR~L~P~~~d~~ 314 (450)
|.|..+..+....|. .+.-+|++++++++++++++++|++.+.. .
T Consensus 504 -------------G~y~~~~~~G~~~d~-~~~~s~~laL~~Gl~~~e~~~~v~~~L~~------------------~--- 548 (739)
T 3cih_A 504 -------------QAFVHNCVDGRQSDA-VTRYANMFSVFFDYLNADKQQAIKQSVLL------------------N--- 548 (739)
T ss_dssp -------------TEECSEEETTEECSC-CCHHHHHHHHHTTCSCHHHHHHHHHHTTT------------------C---
T ss_pred -------------CeeEeecCCCCcCcc-cchHHhHHHHHHCCCCHHHHHHHHHHHhc------------------C---
Confidence 112212111111111 23336788899999999998888765422 0
Q ss_pred CccccCCCCCCCCCcccCCCCchhhHHHHHHHHHHhCChHHHHHHHHHH-HhhCC--CCCCcccccCCCC---------C
Q 013067 315 WRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALA-ENRLP--LDHWPEYYDTRTG---------R 382 (450)
Q Consensus 315 w~~~~~g~~~~rp~aYHNG~VWP~l~g~~~~Al~r~G~~~~A~~ll~~~-~~~l~--~~~~~E~FDG~~g---------~ 382 (450)
+..||+| |||+.+.++.|+.++|+.+.|.+++... ...+. ..++.|.||+... .
T Consensus 549 ------------~~~~~~~--tp~~~~~~~~aL~~~G~~d~A~~ll~~~w~~~v~~Gattl~E~~~~~~~~~~~~~~~g~ 614 (739)
T 3cih_A 549 ------------DEILKIT--TPYMRFYELEALCALGEQETVMKEMKAYWGGMLKAGATSFWEKYNPEESGTQHLAMYGR 614 (739)
T ss_dssp ------------TTSCCCC--SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTCSSCCSCCCTTCCGGGGGCBTTB
T ss_pred ------------ccccccc--chhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCceeEEecccccCCccccccccc
Confidence 0125776 5899999999999999999999987742 33333 4479999998631 1
Q ss_pred ccCCCCChhhhHHHHH-HHHHHHhhc-CCC
Q 013067 383 FTGKQSRLFQTWTIAG-FLTSKMLVE-NPE 410 (450)
Q Consensus 383 p~G~~ac~~QAWSaA~-~Lr~~~~l~-~p~ 410 (450)
|.+...|. +||++. ......++. +|.
T Consensus 615 ~~~~s~~H--aW~ag~~~~l~~~ilGI~p~ 642 (739)
T 3cih_A 615 PYGKSLCH--AWGASPIYLLGKYYLGVKPT 642 (739)
T ss_dssp TTCSCSSB--GGGCTHHHHHHHHTSCEEEE
T ss_pred ccCccccc--ccccchHHHHHHHHhccCcC
Confidence 11222344 799864 334455554 443
No 9
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=99.56 E-value=2.1e-13 Score=155.24 Aligned_cols=295 Identities=15% Similarity=0.128 Sum_probs=180.5
Q ss_pred HhccCChHHHHHHHHhhccccccccCCCCCCCCCCCcceeccccccccccccccCCCCCCCCCCCcC--CCCcHHHHHHH
Q 013067 18 LKERGKSSGISSFILCNCSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVA--PVDSGLWWIIL 95 (450)
Q Consensus 18 ~~~~g~~e~~r~~L~~~qs~~~~~d~~~~~~Gl~Pn~fki~~~~~~~~~~~~~~~ad~Ge~~~~~y~--sVDatLWfi~a 95 (450)
|+..|.+++++.+|..+..... . ..|-++..+.+ + |+. +|+ ..|.+.+++++
T Consensus 341 ll~~G~~e~A~~~l~~L~~~Q~-----~-~~G~~~~~y~i----------------~-G~~---~w~~~Q~D~~g~~l~~ 394 (1020)
T 1ulv_A 341 LLAAGDEEAAARGVEWLFTYQQ-----Q-PDGHFPQTSRV----------------D-GTI---GQNGIQLDETAFPILL 394 (1020)
T ss_dssp HHHHTCHHHHHHHHHHHHHHTC-----C-TTSCCCSCBCT----------------T-SCB---CCCCCBTHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHhc-----C-CCCCeeeEEec----------------C-CCc---CCCCccCccchHHHHH
Confidence 4567999999999985533220 1 23545544421 1 221 233 78999999999
Q ss_pred HHHHHHHhCChhhhcch-hHHHHHHHHHHhhhcCCCCCCCcccccCCCccccccccCCCCcchhhHHHHHHHHHHHHHHh
Q 013067 96 LRAYGKITGDYALQERV-DVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLT 174 (450)
Q Consensus 96 l~~Y~~~TgD~~f~~~p-~l~~~i~~i~~~~~~~~~~~~~~L~~~dg~twmD~~~pR~G~pVEInALwYnAL~~~~~La~ 174 (450)
+++|.+ + |.+++ + .++++++++.+.. + .++-..|-| |.|+-...+++.|.||+.+++||+
T Consensus 395 ~~~~~~-~-d~~~w--~~~v~~al~~i~~~g--------~---~~~~~~WEe----~~g~~~~t~~~~~~AL~~aa~lA~ 455 (1020)
T 1ulv_A 395 ANQIGR-T-DAGFY--RNELKPAADYLVAAG--------P---KTPQERWEE----TGGYSTSTLASQIAALAAAADIAG 455 (1020)
T ss_dssp HHHHTC-C-CHHHH--HHTHHHHHHHHHHHC--------S---CBSBCTTSS----CCBEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh-c-CHHHH--HHHHHHHHHHHHHhC--------C---CCChhhhcc----cCCcCHHHHHHHHHHHHHHHHHHH
Confidence 999975 4 53333 5 7999999997752 1 123336876 356788999999999999999999
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhhcccCCCCCCccccccccccCC----Cce
Q 013067 175 VSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEE----GGY 250 (450)
Q Consensus 175 ~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~~~~~~~~~~~~~~~y~~~a~~~f~~~~~~ip~~l~~~~~~~----~~Y 250 (450)
.+|+ .+.++++.+.++.|++.|+++||.++..+. . ++.|- +-..+.+ +.+
T Consensus 456 ~~G~---~~~a~~w~~~Ad~i~~~i~~~~w~~~g~~~------~-------~g~f~----------r~~~dg~~~~~~~~ 509 (1020)
T 1ulv_A 456 KNGD---AGSAAVYRATADEWQRSTEKWMFTTNGPVG------D-------GKYYL----------RISATGNPNDGATR 509 (1020)
T ss_dssp HTTC---HHHHHHHHHHHHHHHHTHHHHHEESSCSST------T-------SCEEC----------SEESSSCTTSCCEE
T ss_pred HcCC---hhHHHHHHHHHHHHHHHHHHhCCCCccccc------c-------cCeeE----------EEecCCCccccccc
Confidence 9984 555778888899999999999998641000 0 00010 0000000 000
Q ss_pred eecccCCC-ccCcccccccchHH-HhccCCCHH--HHHHHHHHHHHhhhhhhcCCCCccccCCCCCCCCccccCCCCCCC
Q 013067 251 LIGNLQPA-HMDFRFFTLGNLWS-IVSSLGTPK--QNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNT 326 (450)
Q Consensus 251 l~~~v~p~-~~d~r~~~~gn~La-l~~gll~~~--qa~~V~~~v~~~~~~Lltp~gLR~L~P~~~d~~w~~~~~g~~~~r 326 (450)
.+.+-.+. ..+..+| ++++. +.+|+++++ +...-++.+++ .|... .| .|| +-.+|+
T Consensus 510 ~~~n~~~~~~~~~~lD--as~l~l~~~G~~~~~dpr~~~Tl~~i~~---~L~~~------~~----~G~-----~~~RY~ 569 (1020)
T 1ulv_A 510 DWGNGAGVHPENAVLD--GGFLEFVRLGVKAPADPYVADSLAETDA---SISQE------TP----GGR-----MWHRYT 569 (1020)
T ss_dssp ECSTTCCEEEGGGCCB--GGGGHHHHTTSSCTTCHHHHHHHHHHHH---HHEEE------ET----TEE-----EECSBT
T ss_pred ccccccccCCCCCeee--HHHHHHHHhCCCCCCcHHHHHHHHHHHH---Hhccc------CC----CCc-----eeecCC
Confidence 00000000 0111122 23332 358886554 65666677765 44311 01 111 111233
Q ss_pred CCccc------------CCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHhhC-CCCCCcccccC---------CCCCcc
Q 013067 327 PWSYH------------NGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRL-PLDHWPEYYDT---------RTGRFT 384 (450)
Q Consensus 327 p~aYH------------NG~VWP~l~g~~~~Al~r~G~~~~A~~ll~~~~~~l-~~~~~~E~FDG---------~~g~p~ 384 (450)
+..|| .|++||....-+++++++.|+ +|.++++.+..+- ..|.+||.||. .+|+|.
T Consensus 570 ~D~Y~~~~dG~~~~~~g~g~~W~l~T~wlae~~~~~G~--~A~~~~~~l~~~a~~~GllpEq~~~g~~~~~~~~~tG~p~ 647 (1020)
T 1ulv_A 570 YDGYGEKADGSPWDGTGIGRLWPLLSGERGEYALANGQ--DALPYLETMHSAANAGYMIPEQVWDRDEPTSYGHELGRST 647 (1020)
T ss_dssp TCCCSCCTTSCCCSSCCCCCBCTHHHHHHHHHHHHTTC--CCHHHHHHHHHTSCTTCCCCSCBBCCSSCCSSCCCBTSBC
T ss_pred ccccccccCCCcccCCCCCChHHHHHHHHHHHHHHhhH--HHHHHHHHHHHhccccCCcceeecccccccccCCcCCccc
Confidence 33444 378999888888999999887 6888888776654 35789999995 344443
Q ss_pred CCCCChhhhHHHHHHHHHHHhhc
Q 013067 385 GKQSRLFQTWTIAGFLTSKMLVE 407 (450)
Q Consensus 385 G~~ac~~QAWSaA~~Lr~~~~l~ 407 (450)
| ||.+||||.|+++.+...+.
T Consensus 648 ~--g~~PqaWSha~~I~~~~~l~ 668 (1020)
T 1ulv_A 648 G--SASPLSWAMAQYVRLAAGVK 668 (1020)
T ss_dssp S--SCBSCHHHHHHHHHHHHHHH
T ss_pred c--CCcHHHHHHHHHHHHHHHHh
Confidence 1 56699999999998877654
No 10
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=99.53 E-value=4e-13 Score=147.39 Aligned_cols=298 Identities=13% Similarity=0.064 Sum_probs=183.3
Q ss_pred HhccCChHHHHHHHHhhccccccccCCCCCCCCCCCcceeccccccccccccccCCCCCCCCCCCcC--CCCcHHHHHHH
Q 013067 18 LKERGKSSGISSFILCNCSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVA--PVDSGLWWIIL 95 (450)
Q Consensus 18 ~~~~g~~e~~r~~L~~~qs~~~~~d~~~~~~Gl~Pn~fki~~~~~~~~~~~~~~~ad~Ge~~~~~y~--sVDatLWfi~a 95 (450)
|+..|.+++++.+|+.+.+... ..|-++..+. . .|+ | .++ -.|++..++++
T Consensus 352 l~~~G~~~~a~~~l~~l~~~q~-------~~G~~~~~~~----~-------------~G~-p--~w~~~Q~D~~g~~l~~ 404 (684)
T 1lf6_A 352 FIAAGDVDSANRSLDYLAKVVK-------DNGMIPQNTW----I-------------SGK-P--YWTGIQLDEQADPIIL 404 (684)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHH-------HHSSCCSCBC----T-------------TSC-B--CCCCCCHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhhcC-------CCCCccccee----C-------------CCC-c--ccCCccccchHHHHHH
Confidence 4556899999999985544321 2233442231 0 122 1 133 48999999999
Q ss_pred HHHHHHHhCChhhhcchh-HHHHHHHHHHhhhcCCCCCCCcccccCCCccccccccCCCCcchhhHHHHHHHHHHHHHHh
Q 013067 96 LRAYGKITGDYALQERVD-VQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLT 174 (450)
Q Consensus 96 l~~Y~~~TgD~~f~~~p~-l~~~i~~i~~~~~~~~~~~~~~L~~~dg~twmD~~~pR~G~pVEInALwYnAL~~~~~La~ 174 (450)
+..| ..+| + .|. ++++++++.+.. + .++...|-+ |.|.-..+.++.|.||+.+++||+
T Consensus 405 ~~~~-~~~g---~--~~~~v~~al~~i~~~~--------~---~~~~g~WE~----~~g~~~~t~~~~~~aL~~~a~lA~ 463 (684)
T 1lf6_A 405 SYRL-KRYD---L--YDSLVKPLADFIIKIG--------P---KTGQERWEE----IGGYSPATMAAEVAGLTCAAYIAE 463 (684)
T ss_dssp HHHT-TCGG---G--TTTTHHHHHHHHHHHC--------S---SBSSCTTSS----CCBBCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHcC---c--hHHHHHHHHHHHHHhC--------C---CCCcccccc----cCCcCHHHHHHHHHHHHHHHHHHH
Confidence 9854 4555 2 265 999999997752 1 133346877 246778899999999999999999
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhhcccCCCCCCccccccccccC-CCc----
Q 013067 175 VSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPE-EGG---- 249 (450)
Q Consensus 175 ~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~~~~~~~~~~~~~~~y~~~a~~~f~~~~~~ip~~l~~~~~~-~~~---- 249 (450)
.+|+ .+.++.+.+.+++|++.|+++||.++..+- . ++.| .+...+ ++.
T Consensus 464 ~~g~---~~~a~~~~~~a~~i~~~i~~~~w~~~~~~g------~-------~~~f-----------~r~~~d~~~~~~~~ 516 (684)
T 1lf6_A 464 QNKD---YESAQKYQEKADNWQKLIDNLTYTENGPLG------N-------GQYY-----------IRIAGLSDPDADFM 516 (684)
T ss_dssp HTTC---HHHHHHHHHHHHHHHHHHHHHHEESSCSST------T-------SCEE-----------CSCBSSSCTTSCCE
T ss_pred HcCC---hHHHHHHHHHHHHHHHHHHHhccCCCcccc------c-------CCee-----------EEEeccCCCccccc
Confidence 9984 555778888889999999999997631000 0 0011 011101 000
Q ss_pred eeecccCCC-ccCcccccccch-HHHhccCCCHH--HHHHHHHHHHHhhhhhhc--CCCCccccCCCCCCCCccccCCCC
Q 013067 250 YLIGNLQPA-HMDFRFFTLGNL-WSIVSSLGTPK--QNESILNLIEAKWDDLVG--HMPLKICYPALESEDWRIITGSDP 323 (450)
Q Consensus 250 Yl~~~v~p~-~~d~r~~~~gn~-Lal~~gll~~~--qa~~V~~~v~~~~~~Llt--p~gLR~L~P~~~d~~w~~~~~g~~ 323 (450)
+...+-.+. ..+..+|+ ++ .++.+|+++++ ++...++.|++ +|.. +.|- ...-....+|+..
T Consensus 517 ~~~~~~~~~~~~~~~lDa--s~l~~~~~G~~~~~dpr~~~Tl~~i~~---~L~~~~~~G~--~~~RY~~d~y~~~----- 584 (684)
T 1lf6_A 517 INIANGGGVYDQKEIVDP--SFLELVRLGVKSADDPKILNTLKVVDS---TIKVDTPKGP--SWYRYNHDGYGEP----- 584 (684)
T ss_dssp EEETTTTEEEEGGGCCCG--GGGHHHHTTSSCTTCHHHHHHHHHHHH---HSEEEETTEE--EECSSTTCCCSCS-----
T ss_pred cccccccccCCCCCcEeH--HHhHHHhcCCcCCCCHHHHHHHHHHHH---HhccCCCCCC--eEeccCCCCCCcc-----
Confidence 111110000 01111333 33 34478887554 77777777776 4522 1120 0000001122211
Q ss_pred CCCCCcc-cC--CCCchhhHHHHHHHHHHhCChHHHHHHHHHHHhhC-CCCCCcccccCCCCCccCCCCChhhhHHHHHH
Q 013067 324 KNTPWSY-HN--GGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRL-PLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGF 399 (450)
Q Consensus 324 ~~rp~aY-HN--G~VWP~l~g~~~~Al~r~G~~~~A~~ll~~~~~~l-~~~~~~E~FDG~~g~p~G~~ac~~QAWSaA~~ 399 (450)
.+...| |+ |.+||.....+++++++.|+ +|.++++.+..+- ..|.+||-||+.+|+|.|. |.+|+||.|++
T Consensus 585 -~~G~~f~~~g~g~~W~~~t~~~a~al~~~G~--~A~~~~~~l~~~a~~~gllpE~~~~~~g~~~G~--a~PqaWSha~~ 659 (684)
T 1lf6_A 585 -SKTELYHGAGKGRLWPLLTGERGMYEIAAGK--DATPYVKAMEKFANEGGIISEQVWEDTGLPTDS--ASPLNWAHAEY 659 (684)
T ss_dssp -BTTBCCSSSSCCCBBHHHHHHHHHHHHHTTC--CCHHHHHHHHHHSCTTSCCCSCBCTTTCCBCSS--CSSCHHHHHHH
T ss_pred -cCCCccccCCCCCchHHHHHHHHHHHHHhCh--HHHHHHHHHHHhcccCCccCeeecCCCCCCCCC--CcchHHHHHHH
Confidence 122233 34 89999999999999999997 7888888765544 3579999999999988864 24999999999
Q ss_pred HHHHHhhc
Q 013067 400 LTSKMLVE 407 (450)
Q Consensus 400 Lr~~~~l~ 407 (450)
+.+...+.
T Consensus 660 i~~~~~l~ 667 (684)
T 1lf6_A 660 VILFASNI 667 (684)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99876553
No 11
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=99.12 E-value=8.7e-10 Score=115.58 Aligned_cols=257 Identities=14% Similarity=0.126 Sum_probs=162.4
Q ss_pred CCCcHHHHHHHHHHHHHHhCChhhhcchhHHHHHHHHHHhhhc----CC-CCC--C--------Ccc--------cccCC
Q 013067 85 PVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLA----DG-FDM--F--------PSL--------LVTDG 141 (450)
Q Consensus 85 sVDatLWfi~al~~Y~~~TgD~~f~~~p~l~~~i~~i~~~~~~----~~-~~~--~--------~~L--------~~~dg 141 (450)
-+|+.=-+|.++++|++.|||.+|+.+ ...++++.|++.+.. ++ ... + ++| .-+-|
T Consensus 178 ElDSla~~L~la~~Yy~~TgD~~~f~~-~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tG 256 (489)
T 2p0v_A 178 EIDSLCYPIRLAYHYWKTTGDASVFSD-EWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVG 256 (489)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCTTSSH-HHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSS
T ss_pred hhhhhHHHHHHHHHHHHHhCCchhhHH-HHHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCCCC
Confidence 799999999999999999999999875 344555555554332 11 000 0 011 01234
Q ss_pred Ccccccc----ccCCCCcchhhHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhc
Q 013067 142 SCMIDRR----MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYK 217 (450)
Q Consensus 142 ~twmD~~----~pR~G~pVEInALwYnAL~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~~~~~~~~~~~~ 217 (450)
++|-.-| .-|.|+.|-.|+..|-+|+.++++++.++. +.+.++++.+.++.|++.|.++.|.+......+|++.
T Consensus 257 Li~S~fRPSDDa~~yg~~ipSN~~a~v~L~~aaeia~~v~~--d~~la~~~~~lA~eI~~gI~~~gv~~~p~~G~ifAyE 334 (489)
T 2p0v_A 257 LIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNR--KPALAKECTALADEVEKALKKYAVCNHPKYGKIYAFE 334 (489)
T ss_dssp CCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSC--CHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSE
T ss_pred ceeCCCCCCCcchhcCcchHHHHHHHHHHHHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHHHhCEecCCCCccEEEEE
Confidence 5543311 136889999999999999999999999884 5677778888888899999988886531111122222
Q ss_pred ccccchhhhcccCCCCCCccccccccccCCCceeecccCCCccCcccccccchHHH-hccCCC--HHHHHHHHHHHHHhh
Q 013067 218 TEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSI-VSSLGT--PKQNESILNLIEAKW 294 (450)
Q Consensus 218 ~~~y~~~a~~~f~~~~~~ip~~l~~~~~~~~~Yl~~~v~p~~~d~r~~~~gn~Lal-~~gll~--~~qa~~V~~~v~~~~ 294 (450)
.+.| |+++. +|- -+.+++|++ ++|.++ ++.-+.-.+.|++
T Consensus 335 VDG~--------------------------G~~~~-------mDD--anvpSLLslPylG~~~~dDpiy~nTr~~IlS-- 377 (489)
T 2p0v_A 335 VDGF--------------------------GNQLL-------MDD--ANVPSLIALPYLGDVKVTDPIYQNTRKFVWS-- 377 (489)
T ss_dssp ECSS--------------------------SCEEC-------CCC--SSSSCSTTHHHHTSSCTTCHHHHHHHHHHTS--
T ss_pred ecCC--------------------------CCccc-------CCC--CCccHHHHHHHhCCCCCCCHHHHHHHHHHHh--
Confidence 1111 12111 221 223566666 466654 4465566666655
Q ss_pred hhhhcCCCCccccCCCCCCCCcccc---CCCCCCCCCcccCCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHh-hCCCC
Q 013067 295 DDLVGHMPLKICYPALESEDWRIIT---GSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAEN-RLPLD 370 (450)
Q Consensus 295 ~~Lltp~gLR~L~P~~~d~~w~~~~---~g~~~~rp~aYHNG~VWP~l~g~~~~Al~r~G~~~~A~~ll~~~~~-~l~~~ 370 (450)
++ .||..+ +.+ .|+ | |-|.-.||.+..++.| +..++.++++++++.+.+ ....|
T Consensus 378 -~~-NPyy~~------------G~~~~GIGs----p---H~~~~~~Wpmsll~~a-lts~d~~E~~~~L~~l~~t~~gtG 435 (489)
T 2p0v_A 378 -ED-NPYFFK------------GSAGEGIGG----P---HIGYDMIWPMSIMMKA-FTSQNDAEIKTCIKMLMDTDAGTG 435 (489)
T ss_dssp -TT-STTEEE------------CSSCEEECC----T---TTCTTEECHHHHHHHH-HTCCCHHHHHHHHHHHHHTSTTSC
T ss_pred -hc-CCcccc------------cccccCCCC----C---CCCCCchHHHHHHHHH-HhcCCHHHHHHHHHHHHhhCCCCC
Confidence 22 222222 211 111 1 6655556677777777 346888999999987654 45688
Q ss_pred CCcccccCCCCCccCCCCChhhhHHHHHHHHHHHhh
Q 013067 371 HWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLV 406 (450)
Q Consensus 371 ~~~E~FDG~~g~p~G~~ac~~QAWSaA~~Lr~~~~l 406 (450)
-++|=||.+++.+.... .+|||-+.+..+..-+
T Consensus 436 LmhEs~d~~~~~~~TR~---wFaWanslF~e~il~l 468 (489)
T 2p0v_A 436 FMHESFNKNDPKNFTRA---WFAWQNTLFGELILKL 468 (489)
T ss_dssp SCCSEEETTEEEEEECS---CBHHHHHHHHHHHHHH
T ss_pred eeeeeECCCCCCcCCCc---ccHHHHHHHHHHHHHH
Confidence 99999999987776444 9999999977664433
No 12
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=98.87 E-value=3.9e-08 Score=102.45 Aligned_cols=259 Identities=12% Similarity=0.089 Sum_probs=164.1
Q ss_pred CCCCcHHHHHHHHHHHHHHhCChhhhcchhHHHHHHHHHHhhhc-CCCC--C-C----------Cccc--------ccCC
Q 013067 84 APVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLA-DGFD--M-F----------PSLL--------VTDG 141 (450)
Q Consensus 84 ~sVDatLWfi~al~~Y~~~TgD~~f~~~p~l~~~i~~i~~~~~~-~~~~--~-~----------~~L~--------~~dg 141 (450)
--+|+--.|+.+.+.|++.|||.+|+.+ ...++++.|++.... .+.+ + + ++|- -+.|
T Consensus 160 yElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tG 238 (463)
T 3p2c_A 160 WEIDSLCYPLRLAYHYWKTTGDASIFNE-EWIQAITNVLKTFKEQQRKDGVGPYKFQRKTERALDTVSNDGLGAPVKPVG 238 (463)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCCTTCSH-HHHHHHHHHHHHHHHTTCSSSSCSCCCBCCBSCGGGSCHHHHTCSCCCCSS
T ss_pred cHhhhhhHHHHHHHHHHHhhCChhhhcH-HHHHHHHHHHHHHHHHhccCCCCCceEeecCCCCCcccCCCCcCCCcCCCC
Confidence 4589999999999999999999999864 677778877665431 1111 0 0 0110 0134
Q ss_pred Ccccccc----ccCCCCcchhhHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhc
Q 013067 142 SCMIDRR----MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYK 217 (450)
Q Consensus 142 ~twmD~~----~pR~G~pVEInALwYnAL~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~~~~~~~~~~~~ 217 (450)
++|-.=| --..|+.|--|++..-+|+.+++|+..++. +++.++++.+.++.+++.|.++.+++....-.+|++.
T Consensus 239 li~S~FRPSDDa~~~~~~iPsN~~a~v~L~~aaei~~~l~~--d~~la~~~~~lA~eIr~gI~k~gvv~~p~~G~iyAyE 316 (463)
T 3p2c_A 239 LIVSSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNK--KTALSKECKDLAQEVETALKKYAVYNHPKYGKIYAFE 316 (463)
T ss_dssp CCBCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSC--CHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSE
T ss_pred ceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHHHhCEecCCCCceEEEEE
Confidence 4443111 125789999999999999999999998863 5677888888888899999998876522111222222
Q ss_pred ccccchhhhcccCCCCCCccccccccccCCCceeecccCCCccCcccccccchHHH-hccCCCH--HHHHHHHHHHHHhh
Q 013067 218 TEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSI-VSSLGTP--KQNESILNLIEAKW 294 (450)
Q Consensus 218 ~~~y~~~a~~~f~~~~~~ip~~l~~~~~~~~~Yl~~~v~p~~~d~r~~~~gn~Lal-~~gll~~--~qa~~V~~~v~~~~ 294 (450)
.+.| |++.+ +|- -+.|++|++ ++|.++. +.-+.-.+.|++
T Consensus 317 VDG~--------------------------Gs~~l-------mDD--aNvPSLLslPylGf~~~dDpiYqNTrk~IlS-- 359 (463)
T 3p2c_A 317 VDGF--------------------------GNHHL-------MDD--ANVPSLLAMPYLGDVNVNDPIYQNTRRFVWS-- 359 (463)
T ss_dssp ECSS--------------------------SCEEC-------CCC--SSSSCSTTHHHHTSSCTTCHHHHHHHHHHTS--
T ss_pred EecC--------------------------CCccC-------CCC--CCchhHHHHHHcCCCCCCCHHHHHHHHHHHh--
Confidence 2111 22221 221 233677777 5676544 343444444433
Q ss_pred hhhhcCCCCccccCCCCCCCCccccCCCCCCCCCcccCCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHhh-CCCCCCc
Q 013067 295 DDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENR-LPLDHWP 373 (450)
Q Consensus 295 ~~Lltp~gLR~L~P~~~d~~w~~~~~g~~~~rp~aYHNG~VWP~l~g~~~~Al~r~G~~~~A~~ll~~~~~~-l~~~~~~ 373 (450)
+ ..|.|- .|....--.+-|.|.-.||.+..++.++ ..++.+++++.|+.+.+. ...|-+.
T Consensus 360 -------------~--~NPyY~---~G~~~~GiG~PH~~~~~~Wpmsll~~~l-Ts~d~~Ei~~~L~~l~~t~~gtGlmH 420 (463)
T 3p2c_A 360 -------------E--DNPYFF---KGKAGEGIGGPHIGYDMVWPMSIMMKAF-TSQNDAEIKTCIKMLMDTDAGTGFMH 420 (463)
T ss_dssp -------------T--TSTTEE---ECSSCEEECCTTTCTTEECHHHHHHHHH-TCCCHHHHHHHHHHHHHTSTTSSSCC
T ss_pred -------------c--cCCcee---ccCccccCCCCCCCCCCchHHHHHHHHh-ccCCHHHHHHHHHHHHhcCCCCCeee
Confidence 2 222221 1111111124488888888888887763 356788999999876554 5688999
Q ss_pred ccccCCCCCccCCCCChhhhHHHHHHHHHHH
Q 013067 374 EYYDTRTGRFTGKQSRLFQTWTIAGFLTSKM 404 (450)
Q Consensus 374 E~FDG~~g~p~G~~ac~~QAWSaA~~Lr~~~ 404 (450)
|=||.+++.+... ..+|||-+++..+..
T Consensus 421 Esvd~~~~~~~TR---~WFaWaNs~F~elil 448 (463)
T 3p2c_A 421 ESFHKDNPKKFTR---AWFAWQNTLFGELIL 448 (463)
T ss_dssp SEEETTEEEEEEC---SCBHHHHHHHHHHHH
T ss_pred eeECCCCCCcCCC---CchhhhhHHHHHHHH
Confidence 9999998766633 499999999765543
No 13
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=98.86 E-value=2.2e-07 Score=98.41 Aligned_cols=244 Identities=11% Similarity=0.064 Sum_probs=147.7
Q ss_pred CCCCcHHHHHHHHHHHHHHhCChhhh---------------cc---hhHHHHHHHHHHhhhcCCCCCCCcccccCCCccc
Q 013067 84 APVDSGLWWIILLRAYGKITGDYALQ---------------ER---VDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMI 145 (450)
Q Consensus 84 ~sVDatLWfi~al~~Y~~~TgD~~f~---------------~~---p~l~~~i~~i~~~~~~~~~~~~~~L~~~dg~twm 145 (450)
---|.+-+.++++.+|.+...+.... +. +.+++.++++.+.-... +-..|-
T Consensus 142 ~Q~D~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~v~~~w~~p-----------d~dlWE 210 (492)
T 2fba_A 142 PQNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYKNIIKPDLEYVIGYWDST-----------GFDLWE 210 (492)
T ss_dssp CBTTHHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHHHHHHTHHHHHHHHHHHTTSC-----------EECTTS
T ss_pred ccccchhHHHHHHHHHHHHhhccccchhhhhhhccccccccHHHHHHHHHHHHHHHHHhcCCC-----------CCCCcC
Confidence 45799999999999987765443321 11 44555555554433221 222564
Q ss_pred cccccCCCCcchhhHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhhcccccc
Q 013067 146 DRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREY---YWVDMKKINEIYRYKTEEYS 222 (450)
Q Consensus 146 D~~~pR~G~pVEInALwYnAL~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~---FW~~~~~~~~~~~~~~~~y~ 222 (450)
. |.|.-....+.-+.||..+++||+.+|+ .+.++.+.+.++.+++.|.++ ||.+
T Consensus 211 e----r~g~~~~T~~~~~~AL~~aa~lA~~~g~---~~~a~~w~~~ad~i~~~I~~~~~~~w~~---------------- 267 (492)
T 2fba_A 211 E----NQGRHFFTSLVQQKALAYAVDIAKSFDD---GDFANTLSSTASTLESYLSGSDGGFVNT---------------- 267 (492)
T ss_dssp C----CEECCHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHSTTTCCEET----------------
T ss_pred c----cCCCChHHHHHHHHHHHHHHHHHHHcCC---chHHHHHHHHHHHHHHHHHHhhhcCCCC----------------
Confidence 3 3366778999999999999999999874 455667777777788888876 7743
Q ss_pred hhhhcccCCCCCCccccccccccCCCceeeccc------CCCccCcccccccchHHH---hcc-------CC--CHHHHH
Q 013067 223 TDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNL------QPAHMDFRFFTLGNLWSI---VSS-------LG--TPKQNE 284 (450)
Q Consensus 223 ~~a~~~f~~~~~~ip~~l~~~~~~~~~Yl~~~v------~p~~~d~r~~~~gn~Lal---~~g-------ll--~~~qa~ 284 (450)
+.+|...+. ....+|. ++|.+ -++ ++ ++++..
T Consensus 268 ------------------------~~~~f~~~~~~~~~~~~~~lDa------s~Ll~~~~~f~~~~~~~~~~~p~Dpr~l 317 (492)
T 2fba_A 268 ------------------------DVNHIVENPDLLQQNSRQGLDS------ATYIGPLLTHDIGESSSTPFDVDNEYVL 317 (492)
T ss_dssp ------------------------TTTEECSSHHHHHTTSCCSCCT------HHHHHHHHHSCTTSCCCCSCCTTCHHHH
T ss_pred ------------------------CCCEEEEeccccccCCCCcccH------HHHHHHHhccccccccCCccCCCCHHHH
Confidence 222332221 1122342 32212 232 23 344666
Q ss_pred HHHHHHHHhhhhhhcCCCCccccCCCCCCCCccccCCCCCCCCCccc-----CCCCchhhHHHHHH----HH----HHhC
Q 013067 285 SILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYH-----NGGSWPTLLWQFTL----AC----IKMG 351 (450)
Q Consensus 285 ~V~~~v~~~~~~Lltp~gLR~L~P~~~d~~w~~~~~g~~~~rp~aYH-----NG~VWP~l~g~~~~----Al----~r~G 351 (450)
.-++.|++ +|...+|+..--+ ..+ --.||..+ .|. .|..|+--..-+++ |+ .+.|
T Consensus 318 ~Tl~ai~~---~L~~~~pin~~~~--~g~-~v~RY~~D------~y~g~~~~~g~pw~lcT~w~ae~ly~al~~~~~~~g 385 (492)
T 2fba_A 318 QSYYLLLE---DNKDRYSVNSAYS--AGA-AIGRYPED------VYNGDGSSEGNPWFLATAYAAQVPYKLAYDAKSASN 385 (492)
T ss_dssp HHHHHHHH---HHHHHCGGGTTCS--SCC-CCCSCTTC------CBCSSSBSSCCCBHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHH---HHhcccCccccCc--cee-EEEeCCCC------CCCCCCccCCCcHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 66666665 5644333321001 001 11233332 233 37888876555555 33 2444
Q ss_pred -------------------------C----------------------hHHHHHHHHHHHhhCC-CCCCcccccCCCCCc
Q 013067 352 -------------------------R----------------------LGLAQKAVALAENRLP-LDHWPEYYDTRTGRF 383 (450)
Q Consensus 352 -------------------------~----------------------~~~A~~ll~~~~~~l~-~~~~~E~FDG~~g~p 383 (450)
+ .+.|+.+++.+..+-. .|-+||=||..+|+|
T Consensus 386 ~~~i~~~~~~f~~~~~~~~~~~~~G~~~~~~~~y~~~~~~~~~~~~~~~~~A~~~l~~~~~~~~~~GllsEq~d~~tG~~ 465 (492)
T 2fba_A 386 DITINKINYDFFNKYIVDLSTINSAYQSSDSVTIKSGSDEFNTVADNLVTFGDSFLQVILDHINDDGSLNEQLNRYTGYS 465 (492)
T ss_dssp CEEEEGGGHHHHHHHTCCGGGTCTTGGGSSEEEECTTSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCCSEECTTTCCE
T ss_pred ceecchhhHHHHHhhhhhhccccccccccccceeccCchhHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccccCCCCCCC
Confidence 3 4578888887766654 689999999999999
Q ss_pred cCCCCChhhhHHHHHHHHHHHhh
Q 013067 384 TGKQSRLFQTWTIAGFLTSKMLV 406 (450)
Q Consensus 384 ~G~~ac~~QAWSaA~~Lr~~~~l 406 (450)
.|-. +|+||-|++|.+...+
T Consensus 466 ~ga~---PltwSha~li~aa~~~ 485 (492)
T 2fba_A 466 TGAY---SLTWSSGALLEAIRLR 485 (492)
T ss_dssp ESST---TCHHHHHHHHHHHHHH
T ss_pred CCcc---chHHHHHHHHHHHHHH
Confidence 9666 9999999999887655
No 14
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=98.69 E-value=7.4e-07 Score=92.10 Aligned_cols=258 Identities=16% Similarity=0.123 Sum_probs=160.6
Q ss_pred cCCCCcHHHHHHHHHHHHHHhCChhhhcchhHHHHHHHHHHhhhcC---------CCCC-----CCcc--------cccC
Q 013067 83 VAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLAD---------GFDM-----FPSL--------LVTD 140 (450)
Q Consensus 83 y~sVDatLWfi~al~~Y~~~TgD~~f~~~p~l~~~i~~i~~~~~~~---------~~~~-----~~~L--------~~~d 140 (450)
=--+|+--.|+.+.+.|++.|||.+|+.+ ...++++.|++..... .|.. .++| .-+.
T Consensus 131 KyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~t 209 (427)
T 3qt9_A 131 KYEIDSLCYPVRLIHKYWKESGDETFFNY-DIKKAFNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYT 209 (427)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHCCCTTCCH-HHHHHHHHHHHHHHHGGGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCCCC
T ss_pred ccHHhhhHHHHHHHHHHHHhhCChhhhhH-HHHHHHHHHHHHHHHHhccCCCCCceEeccCCCCCccccCCCCCCCcCCC
Confidence 34599999999999999999999999864 5667777775542210 1110 0111 0123
Q ss_pred CCcccccc----ccCCCCcchhhHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh
Q 013067 141 GSCMIDRR----MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRY 216 (450)
Q Consensus 141 g~twmD~~----~pR~G~pVEInALwYnAL~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~~~~~~~~~~~ 216 (450)
|++|-.=| --..|+.|--|++..-+|+.+++|++.++. +.+.++++.+.++.+++.|.++..++....-.+|++
T Consensus 210 Gli~S~FRPSDDa~~~~~~iPsN~~a~vaL~~~aei~~~l~~--d~~La~~~~~la~eIr~aI~k~gvv~~p~~G~iyAy 287 (427)
T 3qt9_A 210 GMTWSGFRPSDDACEYGYLIPANMFAVVALRYISEIAEKVYK--DEELKEKADSLREEIDNAIEKHGKVYKEGFGEVYAY 287 (427)
T ss_dssp SSCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSC--CHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECS
T ss_pred CceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEE
Confidence 44443211 125789999999999999999999998853 567777877888889999998887653221122222
Q ss_pred cccccchhhhcccCCCCCCccccccccccCCCceeecccCCCccCcccccccchHHH-hccCCCH--HHHHHHHHHHHHh
Q 013067 217 KTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSI-VSSLGTP--KQNESILNLIEAK 293 (450)
Q Consensus 217 ~~~~y~~~a~~~f~~~~~~ip~~l~~~~~~~~~Yl~~~v~p~~~d~r~~~~gn~Lal-~~gll~~--~qa~~V~~~v~~~ 293 (450)
..+.| |++++ +|- -+.|++|++ +.|.++. +.-+.-.+.|++
T Consensus 288 EVDG~--------------------------Gs~~l-------MDD--aNvPSLLslPylGf~~~dDpiYqNTrk~IlS- 331 (427)
T 3qt9_A 288 ETDGM--------------------------GNYNF-------MDD--ANVPSLLSIPYLEYKGIEDEVYQNTRKFILS- 331 (427)
T ss_dssp EECSS--------------------------SCEEC-------CCC--SSSSCSTTHHHHTSSCTTCHHHHHHHHHHTS-
T ss_pred EeccC--------------------------CCccc-------cCC--CCchhHHHHHHcCCCCCCCHHHHHHHHHHhc-
Confidence 22111 22211 221 233677777 4666443 343444444433
Q ss_pred hhhhhcCCCCccccCCCCCCCCccccCCCCCCCCCcccCCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHhh-CCCCCC
Q 013067 294 WDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENR-LPLDHW 372 (450)
Q Consensus 294 ~~~Lltp~gLR~L~P~~~d~~w~~~~~g~~~~rp~aYHNG~VWP~l~g~~~~Al~r~G~~~~A~~ll~~~~~~-l~~~~~ 372 (450)
+ ..|.|- .|....--.+-|.|.-.||.+..++.++ ..++.+++++.|..+.+. ...|-+
T Consensus 332 --------------~--~NPyy~---~G~~~~GIG~PH~~~~~~Wpmsl~~~~l-Ts~d~~Ei~~~L~~l~~t~~gtGlm 391 (427)
T 3qt9_A 332 --------------K--NNRFFF---EGKAAKGIGSPHTPDQYIWHIALSMQGL-TTNNQEEIDQLIKLLKETDAGTGYM 391 (427)
T ss_dssp --------------T--TSTTEE---ECSSCEEECCTTSCTTEEEHHHHHHHHH-TCCCHHHHHHHHHHHHHTSTTSSSC
T ss_pred --------------c--cCCcee---ccCccCcCCCCCCCCCCchHHHHHHHHh-hcCCHHHHHHHHHHHHhcCCCCCee
Confidence 2 222221 1111111224599988888888887763 346788888888876554 567899
Q ss_pred cccccCCCCCccCCCCChhhhHHHHHHHHH
Q 013067 373 PEYYDTRTGRFTGKQSRLFQTWTIAGFLTS 402 (450)
Q Consensus 373 ~E~FDG~~g~p~G~~ac~~QAWSaA~~Lr~ 402 (450)
.|=||.+++..... ..+||+-+.+-.+
T Consensus 392 HEsvd~~~~~~~TR---~WFaWaN~lF~el 418 (427)
T 3qt9_A 392 HEGFHVDDPTKFTR---DWFAWSNSLFSHF 418 (427)
T ss_dssp CSEEETTEEEEESC---SCBHHHHHHHHHH
T ss_pred eeeECCCCCCccCC---CcchhhhHHHHHH
Confidence 99999988554433 4999999986544
No 15
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=98.63 E-value=3.2e-06 Score=89.06 Aligned_cols=235 Identities=12% Similarity=0.083 Sum_probs=141.0
Q ss_pred HHHHHHHHHHHHHHhCChhhhcc---hhHHHHHHHHHHhhhcCCCCCCCcccccCCCccccccccCCCCcchhhHHHHHH
Q 013067 89 GLWWIILLRAYGKITGDYALQER---VDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTA 165 (450)
Q Consensus 89 tLWfi~al~~Y~~~TgD~~f~~~---p~l~~~i~~i~~~~~~~~~~~~~~L~~~dg~twmD~~~pR~G~pVEInALwYnA 165 (450)
+-..+++.+ +..+|+.+++++ +.+++.++++.+.-... +-..|-. |.|.-....+.-+.|
T Consensus 132 ~~~~~~~~~--l~~~g~~~~~~~~~w~~i~~~l~~v~~~w~~p-----------d~dlWEe----r~g~~~~T~~~~~~A 194 (472)
T 1gai_A 132 TAMIGFGQW--LLDNGYTSAATEIVWPLVRNDLSYVAQYWNQT-----------GYDLWEE----VNGSSFFTIAVQHRA 194 (472)
T ss_dssp HHHHHHHHH--HHHTTCHHHHHHTHHHHHHHHHHHHHHHTTSC-----------EECTTSC----CEEEEHHHHHHHHHH
T ss_pred HHHHHHHHH--HHHcCCccccchhHHHHHHHHHHHHHHhcCCC-----------CCCCCcc----cCCCCHHHHHHHHHH
Confidence 334466665 667788776553 66666666664433322 2225643 346678889999999
Q ss_pred HHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhhcccCCCCCCcccccccccc
Q 013067 166 LRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIP 245 (450)
Q Consensus 166 L~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~~~~~~~~~~~~~~~y~~~a~~~f~~~~~~ip~~l~~~~~ 245 (450)
|..+++||+.+|+ . .+.+.+.++.++..| ++||.. .| ++.
T Consensus 195 L~~aa~lA~~~g~--~---~~~w~~~ad~I~~~i-~~~w~g---------------------~f----------~~~--- 234 (472)
T 1gai_A 195 LVEGSAFATAVGS--S---CSWCDSQAPQILCYL-QSFWTG---------------------SY----------ILA--- 234 (472)
T ss_dssp HHHHHHHHHHTTC--C---CHHHHHHHHHHHHHH-GGGBCS---------------------SS----------BCS---
T ss_pred HHHHHHHHHHcCC--c---HHHHHHHHHHHHHHH-HhhcCC---------------------ce----------EEe---
Confidence 9999999999985 2 344566667788888 888831 01 000
Q ss_pred CCCceeecccCCCccCcccccccchHHHhccC------------CCHHHHHHHHHHHHHhhhhhhcCCCCccccCCCCCC
Q 013067 246 EEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSL------------GTPKQNESILNLIEAKWDDLVGHMPLKICYPALESE 313 (450)
Q Consensus 246 ~~~~Yl~~~v~p~~~d~r~~~~gn~Lal~~gl------------l~~~qa~~V~~~v~~~~~~Lltp~gLR~L~P~~~d~ 313 (450)
|. +. +....|. ..+|+...+. .++++...-++.|++ +|..-|++..--| .
T Consensus 235 ----~~-~~-~~~~lDa-----s~LL~~~~~f~p~~~~~~~~~~p~Dpr~l~Tl~ai~~---~L~~~y~i~~~~~----~ 296 (472)
T 1gai_A 235 ----NF-DS-SRSGKDT-----NTLLGSIHTFDPEAGCDDSTFQPCSPRALANHKEVVD---SFRSIYTLNDGLS----D 296 (472)
T ss_dssp ----EE-SC-CSCCCCT-----HHHHHHHTTCCTTCCSCTTTTCTTSHHHHHHHHHHHH---TTTTTCGGGTTCC----T
T ss_pred ----ec-CC-CCCCcCH-----HHHHhhhccCCccccccccCCCCCCHHHHHHHHHHHH---HHHHhcCcCCCCc----C
Confidence 00 00 1112332 1122222222 144566666666665 5532222221000 0
Q ss_pred C---CccccCCCCCCCCCcccCCCCchhhHHHHHHHHHH-----------------------------hC----------
Q 013067 314 D---WRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIK-----------------------------MG---------- 351 (450)
Q Consensus 314 ~---w~~~~~g~~~~rp~aYHNG~VWP~l~g~~~~Al~r-----------------------------~G---------- 351 (450)
| --.||. .-.|..|..|.--..-+++++.+ .|
T Consensus 297 g~g~~v~RY~------~D~y~gg~pw~lcT~wlae~l~~a~~~~~~~~~i~~~~~~~~ff~~~~~~~~~G~~~~~~~~~~ 370 (472)
T 1gai_A 297 SEAVAVGRYP------EDSYYNGNPWFLCTLAAAEQLYDALYQWDKQGSLEITDVSLDFFKALYSGAATGTYSSSSSTYS 370 (472)
T ss_dssp TSCCCCCSCT------TCCGGGSCCBHHHHHHHHHHHHHHHHHHHHHTEEEECTTTHHHHHHHCTTCCSEEEETTSHHHH
T ss_pred cccceEEeCC------CCCCCCCCcHHHHHHHHHHHHHHHHHHhhccCceeecchhHHHHHhhcccccccccccCchhHH
Confidence 1 122333 33566799888776777777553 34
Q ss_pred ChHH-----HHHHHHHHHhhC-CCCCCcccccCCCCCccCCCCChhhhHHHHHHHHHHHhhc
Q 013067 352 RLGL-----AQKAVALAENRL-PLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVE 407 (450)
Q Consensus 352 ~~~~-----A~~ll~~~~~~l-~~~~~~E~FDG~~g~p~G~~ac~~QAWSaA~~Lr~~~~l~ 407 (450)
+.++ |+.+++.++.+- ..|-+||=||..+|+|.|-. +|+||-+++|.+...+.
T Consensus 371 ~~~~~~~~~A~~~~e~~~~~~~~~GllsEq~d~~tG~~~gn~---PlawSha~lI~aa~~l~ 429 (472)
T 1gai_A 371 SIVSAVKTFADGFVSIVETHAASNGSLSEQFDKSDGDELSAR---DLTWSYAALLTANNRRN 429 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTCCCCSEECTTTCCEESSS---SCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCcccccCCCCCCCCCcc---chHHHHHHHHHHHHHHh
Confidence 3334 777777766655 46899999999999998666 99999999999988775
No 16
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=98.63 E-value=2.5e-06 Score=92.34 Aligned_cols=235 Identities=14% Similarity=0.121 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHHHHhCChhhhcc---hhHHHHHHHHHHhhhcCCCCCCCcccccCCCccccccccCCCCcchhhHHHHHH
Q 013067 89 GLWWIILLRAYGKITGDYALQER---VDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTA 165 (450)
Q Consensus 89 tLWfi~al~~Y~~~TgD~~f~~~---p~l~~~i~~i~~~~~~~~~~~~~~L~~~dg~twmD~~~pR~G~pVEInALwYnA 165 (450)
+-..+++.+ +..+|+.+++++ +.++++++++.+.-... +...|-. |.|.-....+.-+.|
T Consensus 133 ~~~~~~~~~--~~~~g~~~~~~~~~w~~v~~~l~~v~~~w~~~-----------d~dlWEe----r~g~~~~T~~~~~~a 195 (599)
T 2vn4_A 133 IALIGYSKW--LINNNYQSTVSNVIWPIVRNDLNYVAQYWNQT-----------GFDLWEE----VNGSSFFTVANQHRA 195 (599)
T ss_dssp HHHHHHHHH--HHHTTCHHHHHHHTHHHHHHHHHHHHHHTTSC-----------EECTTSC----CEEEEHHHHHHHHHH
T ss_pred HHHHHHHHH--HHHhCCcccccHHHHHHHHHHHHHHHHhCCCC-----------CCCeeee----cCCcchHHHHHHHHH
Confidence 445566665 467899887653 77777777765543322 2225643 345667788999999
Q ss_pred HHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhhcccCCCCCCcccccccccc
Q 013067 166 LRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIP 245 (450)
Q Consensus 166 L~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~~~~~~~~~~~~~~~y~~~a~~~f~~~~~~ip~~l~~~~~ 245 (450)
|..+++||+.+|+ . ++.+.+.++.++..| ++||.++
T Consensus 196 L~~aa~lA~~~g~--~---~~~w~~~ad~i~~~i-~~~w~~~-------------------------------------- 231 (599)
T 2vn4_A 196 LVEGATLAATLGQ--S---GSAYSSVAPQVLCFL-QRFWVSS-------------------------------------- 231 (599)
T ss_dssp HHHHHHHHHHHTC--C---CHHHHHHHHHHHHHH-GGGEETT--------------------------------------
T ss_pred HHHHHHHHHHcCC--C---HHHHHHHHHHHHHHH-HhhcCCC--------------------------------------
Confidence 9999999999985 2 234556667788888 8888642
Q ss_pred CCCceeeccc----CCCccCcccccccchHHHhccC------------CCHHHHHHHHHHHHHhhhhhhcCCCCccccCC
Q 013067 246 EEGGYLIGNL----QPAHMDFRFFTLGNLWSIVSSL------------GTPKQNESILNLIEAKWDDLVGHMPLKICYPA 309 (450)
Q Consensus 246 ~~~~Yl~~~v----~p~~~d~r~~~~gn~Lal~~gl------------l~~~qa~~V~~~v~~~~~~Lltp~gLR~L~P~ 309 (450)
+.|.-.+. .....| + ..+|+...+. .++++...-++.|++ +|..-|++..-.|
T Consensus 232 --g~f~~~~~~~~~~~~~lD----a-s~LL~~~~~f~~~~~~~~~~~~p~dpr~l~Tl~ai~~---~L~~~y~i~~g~~- 300 (599)
T 2vn4_A 232 --GGYVDSNINTNEGRTGKD----V-NSVLTSIHTFDPNLGCDAGTFQPCSDKALSNLKVVVD---SFRSIYGVNKGIP- 300 (599)
T ss_dssp --TTEECSEESSCCCCCCCB----T-HHHHHHHHSCCGGGTTCTTTTCTTSHHHHHHHHHHHH---HHHTTCGGGTTCC-
T ss_pred --CCEEEEecCccCCCCCcC----H-HHHhhhhccCCccccccccCCCCCCHHHHHHHHHHHH---HHHhhcCcCCCCc-
Confidence 11111110 111233 2 1122222222 244566666666666 5532222221000
Q ss_pred CCCCC---CccccCCCCCCCCCcccCCCCchhhHHHHHHHHHH-----------------------------hCCh----
Q 013067 310 LESED---WRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIK-----------------------------MGRL---- 353 (450)
Q Consensus 310 ~~d~~---w~~~~~g~~~~rp~aYHNG~VWP~l~g~~~~Al~r-----------------------------~G~~---- 353 (450)
.| .-.||..+ .|..|..|.--..-+++++.+ .|..
T Consensus 301 ---~g~~~~v~RY~~D------~y~Gg~pw~lcT~w~ae~l~~a~~~~~~~g~i~~~~~~~~ff~~~~~~~~~G~~~~~~ 371 (599)
T 2vn4_A 301 ---AGAAVAIGRYAED------VYYNGNPWYLATFAAAEQLYDAIYVWKKTGSITVTATSLAFFQELVPGVTAGTYSSSS 371 (599)
T ss_dssp ---TTSCCCCCSBTTC------CGGGCCCBHHHHHHHHHHHHHHHHHHHHHTEEEECTTTHHHHHHHSTTCCSEEEETTS
T ss_pred ---CCceeEEEeCCCC------CCCCCCcHHHHHHHHHHHHHHHHHhhhccCceeeccchhHHHhhhcccccccccccCc
Confidence 01 22344333 455588787665555555432 3321
Q ss_pred -----------HHHHHHHHHHHhhC-CCCCCcccccCCCCCccCCCCChhhhHHHHHHHHHHHhhc
Q 013067 354 -----------GLAQKAVALAENRL-PLDHWPEYYDTRTGRFTGKQSRLFQTWTIAGFLTSKMLVE 407 (450)
Q Consensus 354 -----------~~A~~ll~~~~~~l-~~~~~~E~FDG~~g~p~G~~ac~~QAWSaA~~Lr~~~~l~ 407 (450)
+.|+.+++.++.+- ..|-+||=||..+|+|.|-. +|+||-|++|.+...++
T Consensus 372 ~~~~~~~~~~~~~A~~~~~~~~~~a~~~GllsEqvd~~~G~~~gn~---PlawSha~lI~a~~~~~ 434 (599)
T 2vn4_A 372 STFTNIINAVSTYADGFLSEAAKYVPADGSLAEQFDRNSGTPLSAL---HLTWSYASFLTATARRA 434 (599)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCCSEECTTTCCEESSS---SCHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCccCCcc---hHHHHHHHHHHHHHHHh
Confidence 22777777666654 36899999999999998666 99999999999987764
No 17
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=98.52 E-value=2.3e-06 Score=88.34 Aligned_cols=258 Identities=12% Similarity=0.030 Sum_probs=157.5
Q ss_pred cCCCCcHHHHHHHHHHHHHHhCChhhhcchhHHHHHHHHHHhhhc-CCCCC------------CCcc--------cccCC
Q 013067 83 VAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLA-DGFDM------------FPSL--------LVTDG 141 (450)
Q Consensus 83 y~sVDatLWfi~al~~Y~~~TgD~~f~~~p~l~~~i~~i~~~~~~-~~~~~------------~~~L--------~~~dg 141 (450)
=--+|+--.|+.+.+.|++.|||.+|+.+ ...++++.|++.... .+... .++| .-+.|
T Consensus 130 KyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a~~~il~~~~~eq~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tG 208 (426)
T 3qry_B 130 KYEVDSLCYPLQLAYLLWKETGETSQFDE-IFVAATKEILHLWTVEQDHKNSPYRFVRDTDRKEDTLVNDGFGPDFAVTG 208 (426)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCCCTTCSH-HHHHHHHHHHHHHHHTTSGGGCCCCCEECCSCGGGSCHHHHTCSCCCCCS
T ss_pred ccHHhhhHHHHHHHHHHHHhhCChhhhhH-HHHHHHHHHHHHHHHHhccCCCCceeeecCCCCCccccCCCCCCCcCCCC
Confidence 34589999999999999999999999865 577777777655332 11100 0111 01134
Q ss_pred Ccccccc----ccCCCCcchhhHHHHHHHHHHHHHHhh--cCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 013067 142 SCMIDRR----MGIHGHPLEIQALFYTALRCSREMLTV--SDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYR 215 (450)
Q Consensus 142 ~twmD~~----~pR~G~pVEInALwYnAL~~~~~La~~--~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~~~~~~~~~~ 215 (450)
++|-.=| --..|+.|--|++..-+|+.+++|++. ... +++.++++.+.++.+++.|.++..++....-.+|+
T Consensus 209 li~S~FRPSDDa~~~~~~iPsN~~~~v~L~~~aei~~~~~v~~--d~~la~~~~~la~eIr~~I~k~gvv~h~~~g~iyA 286 (426)
T 3qry_B 209 MTWSAFRPSDDCCQYSYLIPSNMFAVVVLGYVQEIFAALNLAD--SQSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYA 286 (426)
T ss_dssp SCCCSBCTTSSBCSSSEEHHHHHHHHHHHHHHHHHHHHHTCTT--HHHHHHHHHHHHHHHHHHHHHHSEEECTTCCEEEC
T ss_pred ceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHhccccC--cHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEE
Confidence 4443211 125789999999999999999999984 421 45667777777778899998887765322112222
Q ss_pred hcccccchhhhcccCCCCCCccccccccccCCCceeecccCCCccCcccccccchHHH-hccCCCH--HHHHHHHHHHHH
Q 013067 216 YKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSI-VSSLGTP--KQNESILNLIEA 292 (450)
Q Consensus 216 ~~~~~y~~~a~~~f~~~~~~ip~~l~~~~~~~~~Yl~~~v~p~~~d~r~~~~gn~Lal-~~gll~~--~qa~~V~~~v~~ 292 (450)
+..+.|| +++ -+|- -+.|++|++ +.|.++. +.-+.-.+.|++
T Consensus 287 yEVDG~G--------------------------s~~-------lmDD--aNvPSLLslPylGf~~~dDpiYqNTrk~IlS 331 (426)
T 3qry_B 287 FEVDGLG--------------------------NAS-------IMDD--PNVPSLLAAPYLGYCSVDDEVYQATRRTILS 331 (426)
T ss_dssp SEECSSS--------------------------CBC-------CCCC--SSSSCSTTTTTTTSSCTTCHHHHHHHHHHTS
T ss_pred EEeccCC--------------------------Ccc-------ccCC--CCchhHHHHHHcCCCCCCCHHHHHHHHHHhc
Confidence 2221111 111 1221 233677777 4666444 343444444433
Q ss_pred hhhhhhcCCCCccccCCCCCCCCccccCCCCCCCCCcccCCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHhh-CCCCC
Q 013067 293 KWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENR-LPLDH 371 (450)
Q Consensus 293 ~~~~Lltp~gLR~L~P~~~d~~w~~~~~g~~~~rp~aYHNG~VWP~l~g~~~~Al~r~G~~~~A~~ll~~~~~~-l~~~~ 371 (450)
+ ..|.|- .|....--.+-|.|.-.||.+..++.++- .++.+++++.|..+.+. ...|-
T Consensus 332 ---------------~--~NPyy~---~G~~~~GiG~PH~~~~~~Wpmsl~~~~lT-s~d~~Ei~~~L~~l~~t~~gtGl 390 (426)
T 3qry_B 332 ---------------S--ENPYFY---QGEYASGLGSSHTFYRYIWPIALSIQGLT-TRDKAEKKFLLDQLVACDGGTGV 390 (426)
T ss_dssp ---------------T--TSTTEE---ECSSCEEECCTTSCTTEECHHHHHHHHHT-CSCHHHHHHHHHHHHHTSTTSSS
T ss_pred ---------------c--cCCcee---ccCccCcCCCCCCCCCCchHHHHHHHHHh-CCCHHHHHHHHHHHHhcCCCCCe
Confidence 2 222221 11111111244888878888888877743 35678888888876554 56789
Q ss_pred CcccccCCCCCccCCCCChhhhHHHHHHHHH
Q 013067 372 WPEYYDTRTGRFTGKQSRLFQTWTIAGFLTS 402 (450)
Q Consensus 372 ~~E~FDG~~g~p~G~~ac~~QAWSaA~~Lr~ 402 (450)
+.|=||.+++.... +..+||+-+.+-.+
T Consensus 391 mHEsvd~~~~~~~T---R~WFaWaN~lF~el 418 (426)
T 3qry_B 391 MHESFHVDDPTLYS---REWFSWANMMFCEL 418 (426)
T ss_dssp CCSEEETTEEEEEE---CSCCHHHHHHHHHH
T ss_pred eeeeECCCCCCccC---CCchhhhhHHHHHH
Confidence 99999998854443 34999999886544
No 18
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=95.75 E-value=0.26 Score=54.85 Aligned_cols=88 Identities=9% Similarity=0.026 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHhCChhhhcc---hhHHHHHHHHHHhhhcCC---CCCCCcccccCCCcccc--ccccCCCCcchhhH
Q 013067 89 GLWWIILLRAYGKITGDYALQER---VDVQTGIKLIMNLCLADG---FDMFPSLLVTDGSCMID--RRMGIHGHPLEIQA 160 (450)
Q Consensus 89 tLWfi~al~~Y~~~TgD~~f~~~---p~l~~~i~~i~~~~~~~~---~~~~~~L~~~dg~twmD--~~~pR~G~pVEInA 160 (450)
+.|...++++|+++|||.+|+++ |-+.++.+...+++..+. +...+.. .|+-.. .. ......--+...|+
T Consensus 450 ~awla~~lw~yy~~TgD~~fL~~~~~p~l~e~A~F~~~~l~~~~~g~y~i~p~~-sPE~~~-~~~g~~~~~~~n~tytn~ 527 (803)
T 2rdy_A 450 GVWLTQHLWEHYTFGEDEAYLRDTAYPIMKEAALFCLDWLIENEAGYLVTSPST-SPEQRF-RIGEKGYAVSSATTMDLS 527 (803)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHTHHHHHHHHHHHHHHHCEECTTSCEECSSBC-BTTBCE-EETTEEECCBSCCHHHHH
T ss_pred HHHHHHHHHHHHHhhCCHHHHHhhchHHHHHHHHHHHHhhEECCCCcEEECCCC-cccccc-cCCCcccccccChHHHHH
Confidence 57999999999999999999987 888888888877765432 2222211 111100 00 00000112568999
Q ss_pred HHHHHHHHHHHHHhhcCC
Q 013067 161 LFYTALRCSREMLTVSDG 178 (450)
Q Consensus 161 LwYnAL~~~~~La~~~g~ 178 (450)
++...|+.+.++++.+|.
T Consensus 528 ~~~~~l~~a~~a~~~Lg~ 545 (803)
T 2rdy_A 528 LIAECFDNCIQAAKRLSI 545 (803)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHCc
Confidence 999999999999999984
No 19
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*
Probab=93.79 E-value=1.2 Score=50.17 Aligned_cols=83 Identities=14% Similarity=0.075 Sum_probs=54.2
Q ss_pred cHHHHHHHHHHHHHHhCChhhhcc--hhHHHHHHHHHHh-hhcCCCCCCCcccccCCCccccccc-cCCC-----Ccchh
Q 013067 88 SGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNL-CLADGFDMFPSLLVTDGSCMIDRRM-GIHG-----HPLEI 158 (450)
Q Consensus 88 atLWfi~al~~Y~~~TgD~~f~~~--p~l~~~i~~i~~~-~~~~~~~~~~~L~~~dg~twmD~~~-pR~G-----~pVEI 158 (450)
.+.|....+++|+++|||.+|++. |-++++.+...++ +..+.- ...+- .-+...+ |.++ -+...
T Consensus 507 ~~aWla~~lweyy~yTgD~~fL~~~yPlLkeaA~F~~d~~l~~~~~-~~~G~------~vi~ps~SPE~~~~~~~~~tyd 579 (899)
T 2eab_A 507 AVPWILQNVYEAYEYSGDPALLDRVYALLKEESHFYVNYMLHKAGS-SSGDR------LTTGVAYSPEQGPLGTDGNTYE 579 (899)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCEECCG-GGCSS------EECSEEEETTEEEEEEECCHHH
T ss_pred hHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhheEecCc-CCCCe------EEEccccCCCCCCCCCCCcHHH
Confidence 467999999999999999999944 8888888888773 322210 00111 1111111 2222 23478
Q ss_pred hHHHHHHHHHHHHHHhhcC
Q 013067 159 QALFYTALRCSREMLTVSD 177 (450)
Q Consensus 159 nALwYnAL~~~~~La~~~g 177 (450)
|++....|..+.+.++.++
T Consensus 580 n~l~~~ll~~~i~aa~~Lg 598 (899)
T 2eab_A 580 SSLVWQMLNDAIEAAKAKG 598 (899)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 8999999999988888776
No 20
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=90.76 E-value=0.83 Score=50.52 Aligned_cols=78 Identities=12% Similarity=0.049 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHhCChhhhcc---hhHHHHHHHHHHhhhcC----CCCCCCcccccCCCccccccccCCCCcchhhHH
Q 013067 89 GLWWIILLRAYGKITGDYALQER---VDVQTGIKLIMNLCLAD----GFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQAL 161 (450)
Q Consensus 89 tLWfi~al~~Y~~~TgD~~f~~~---p~l~~~i~~i~~~~~~~----~~~~~~~L~~~dg~twmD~~~pR~G~pVEInAL 161 (450)
+.|...++++|++.|||.+|+++ |-+.++-+...+.+..+ .|.+. ++..||-.. .. .--...+|++
T Consensus 429 ~a~ia~a~~~yy~~T~D~~fL~~~g~~~l~e~A~Fw~s~~~~~~~~g~y~i~-~VtgPdEy~--e~----v~nn~ytn~~ 501 (754)
T 1h54_A 429 NGDIAFAIYNYTRYTGDDSYVLHEGAKVLTEISRFWADRVHFSKRNNQYMIH-GVTGADEYE--NN----VDNNWDTNML 501 (754)
T ss_dssp HHHHHHHHHHHHHHHCCCTTTTTHHHHHHHHHHHHHHHHCEEETTTTEEECC-SBCCSSTTS--CS----BSCCHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCHHHHHhCChHHHHHHHHHHHHheEEeCCCCEEEEc-cccCccccc--CC----CCCcHHHHHH
Confidence 58999999999999999999986 88888888776665321 12221 111122111 10 1134679999
Q ss_pred HHHHHHHHHHHH
Q 013067 162 FYTALRCSREML 173 (450)
Q Consensus 162 wYnAL~~~~~La 173 (450)
+...|+.+.+++
T Consensus 502 a~~~l~~a~~~~ 513 (754)
T 1h54_A 502 AQWTLKYTLEIL 513 (754)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999988
No 21
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=84.76 E-value=24 Score=34.56 Aligned_cols=100 Identities=7% Similarity=-0.112 Sum_probs=51.5
Q ss_pred CCcHHHHHHHHHHHHHH-hCChhhhcchhHHHHHHHHHHhhhcCCCCCCCcccccCCCccccccccCCCCcchhhHHHHH
Q 013067 86 VDSGLWWIILLRAYGKI-TGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYT 164 (450)
Q Consensus 86 VDatLWfi~al~~Y~~~-TgD~~f~~~p~l~~~i~~i~~~~~~~~~~~~~~L~~~dg~twmD~~~pR~G~pVEInALwYn 164 (450)
.|-++- +++..+-++. |||..+++- +.++++++.+.+.... ..+...+..||. ..| ..+.++.||++..
T Consensus 53 ~~nar~-i~~~a~a~~~~~~~~~~~~~--A~~~~~~l~~~~~~~~-Gg~~~~~d~dg~-~~~-----~~~~~~~~af~i~ 122 (388)
T 2gz6_A 53 WLQNRQ-VWTFSMLCNQLEKRENWLKI--ARNGAKFLAQHGRDDE-GNWYFALTRGGE-PLV-----QPYNIFSDCFAAM 122 (388)
T ss_dssp HHHHHH-HHHHHHHHHHTCCCHHHHHH--HHHHHHHHHHHSBCTT-SCBCSEECTTSC-BCC-----CCCCHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHHHHhcCCHHHHHH--HHHHHHHHHHhcCCCC-CCEEEEEcCCCC-ccc-----CCcchHHHHHHHH
Confidence 344444 4444444556 799888755 7888888876644221 111100011221 111 1355788888777
Q ss_pred HHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhh
Q 013067 165 ALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWV 205 (450)
Q Consensus 165 AL~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~ 205 (450)
||..+.+ ..| ++++ .+.+.++.+.+.++||.
T Consensus 123 al~~~y~---~tg---~~~~----l~~A~~~~~~i~~~~~d 153 (388)
T 2gz6_A 123 AFSQYAL---ASG---EEWA----KDVAMQAYNNVLRRKDN 153 (388)
T ss_dssp HHHHHHH---HHC---CHHH----HHHHHHHHHHHHTC---
T ss_pred HHHHHHH---HhC---CHHH----HHHHHHHHHHHHHHhcC
Confidence 7755443 344 2443 44555667777777763
No 22
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=80.84 E-value=19 Score=36.74 Aligned_cols=92 Identities=18% Similarity=0.101 Sum_probs=52.3
Q ss_pred HHHHHHHH---hccCChHHHHHHHHhhccccccccCCCCCCCCCCCcceeccccccccccccccCCCCCCCCCCCcCCCC
Q 013067 11 LQLWLSCL---KERGKSSGISSFILCNCSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVD 87 (450)
Q Consensus 11 ~~~~~~~~---~~~g~~e~~r~~L~~~qs~~~~~d~~~~~~Gl~Pn~fki~~~~~~~~~~~~~~~ad~Ge~~~~~y~sVD 87 (450)
+..+++|. ..+|+++ .+.++.+ +...++.+|.++.|.|+.-- + .|... ..---+|
T Consensus 117 F~~~~s~~~~y~ltg~~~-~~~~~~~--aA~~L~~r~~~~~g~iqsw~-----~-------------~~~~~-~~~~iID 174 (397)
T 2zzr_A 117 FLYTPSCTAEYRINGDVK-ALEATIK--AADKLMERYQEKGGFIQAWG-----E-------------LGYKE-HYRLIID 174 (397)
T ss_dssp HHHTTTHHHHHHHHCCHH-HHHHHHH--HHHHHHTTEETTTTEECCSS-----S-------------TTCGG-GCEEETT
T ss_pred HHHHHHHHHHHHHhCCHH-HHHHHHH--HHHHHHHHhCcCCCEEEecc-----c-------------CCCCC-CCceeec
Confidence 34555554 6789987 4444442 22223445665667676432 0 01100 0123478
Q ss_pred cHHHHHHHHHHHHHHhCChhhhcchhHHHHHHHHHHhhhc
Q 013067 88 SGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLA 127 (450)
Q Consensus 88 atLWfi~al~~Y~~~TgD~~f~~~p~l~~~i~~i~~~~~~ 127 (450)
+.+ -|-++..-.+.+||..+++. ..+..+.+++.+..
T Consensus 175 ~~m-ni~~L~~A~~~~gd~~y~~~--A~~ha~~~l~~~~r 211 (397)
T 2zzr_A 175 CLL-NIQLLFFAYEQTGDEKYRQV--AVNHFYASANNVVR 211 (397)
T ss_dssp HHH-HTHHHHHHHHHHCCHHHHHH--HHHHHHHHHHHTBC
T ss_pred hHh-HHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHhCcC
Confidence 777 78888888899999999765 44455555555443
No 23
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=76.82 E-value=46 Score=33.22 Aligned_cols=93 Identities=10% Similarity=0.083 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhCChhhhcchhHHHHHHHHHHhhhcCCCCCCCcccccCCCcc--ccccccCCCCcchhhHHHHHHHHHH
Q 013067 92 WIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCM--IDRRMGIHGHPLEIQALFYTALRCS 169 (450)
Q Consensus 92 fi~al~~Y~~~TgD~~f~~~p~l~~~i~~i~~~~~~~~~~~~~~L~~~dg~tw--mD~~~pR~G~pVEInALwYnAL~~~ 169 (450)
.|++...-++.+|+..+++. ..++++++.+.+..... .++ .| -|.+....-+.++.+|..-.|+..+
T Consensus 57 ~i~~~a~a~~~~g~~~~l~~--A~~~~~fl~~~~~d~~~---Gg~------~~~~~dG~~~~~~~~lyd~Af~i~al~~~ 125 (402)
T 3gt5_A 57 FVFNYAMAYLQFGTAEYLDA--VHHGLSYVRDVHRNPAT---GGY------AWTLCDDRVEDDTNHCYGLAFVMLAYSCG 125 (402)
T ss_dssp HHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHTTBCTTT---SCB------CSEEETTEEEECCEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCChHHHHH--HHHHHHHHHHhCccCCC---CcE------EEEeeCCCCCcCCcchHHHHHHHHHHHHH
Confidence 45555555667899888755 77778877654332111 111 11 1111111224568888776665552
Q ss_pred HHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhh
Q 013067 170 REMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVD 206 (450)
Q Consensus 170 ~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~ 206 (450)
. ..|+ +++ .+.+.++.+.+.++||.+
T Consensus 126 ~----~tgd---~~~----l~~A~~l~~~i~~~f~d~ 151 (402)
T 3gt5_A 126 L----KVGI---KQA----REWMDETWCLLERHFWDA 151 (402)
T ss_dssp H----HTTC---TTH----HHHHHHHHHHHHHHTEET
T ss_pred H----HhCC---hhH----HHHHHHHHHHHHHHhcCC
Confidence 2 2342 332 345566788888888853
No 24
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=72.34 E-value=84 Score=31.55 Aligned_cols=95 Identities=17% Similarity=0.093 Sum_probs=53.0
Q ss_pred HHHHHHHHHH---hccCChHHHHHHHHhhccccccccCCCCCCCCCCCcceeccccccccccccccCCCCCCCCCCCcCC
Q 013067 9 LCLQLWLSCL---KERGKSSGISSFILCNCSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAP 85 (450)
Q Consensus 9 ~~~~~~~~~~---~~~g~~e~~r~~L~~~qs~~~~~d~~~~~~Gl~Pn~fki~~~~~~~~~~~~~~~ad~Ge~~~~~y~s 85 (450)
+....+++|. ..+|+++--.-++. ....++..|.++-|.|+.-- + .++......-.
T Consensus 89 ~Gf~~~~s~~~~y~ltg~~~~~~~~~~---aA~~L~~r~~~~~g~i~sw~-----~-------------~~~~~~~~~~i 147 (377)
T 2ahf_A 89 IGFLYSLSAKAQWIVEKDESARKLALD---AADVLMRRWRADAGIIQAWG-----P-------------KGDPENGGRII 147 (377)
T ss_dssp HHHHHHTTHHHHHHHHCCHHHHHHHHH---HHHHHHTTEETTTTEECCBS-----S-------------TTCTTTTTEEE
T ss_pred chHhhHHHHHHHHHHhCCHHHHHHHHH---HHHHHHHhCCCCCCeEEecc-----C-------------CCCCCCCceEE
Confidence 4455566664 68898754444444 22223445555446666421 0 01110011345
Q ss_pred CCcHHHHHHHHHHHHHHhCChhhhcchhHHHHHHHHHHhhhc
Q 013067 86 VDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLA 127 (450)
Q Consensus 86 VDatLWfi~al~~Y~~~TgD~~f~~~p~l~~~i~~i~~~~~~ 127 (450)
+|+.+= |-++..-.+.|||..+++. ..+..+.+++.+..
T Consensus 148 ID~mmn-i~~L~~A~~~~gd~~y~~~--A~~~a~~~l~~~~r 186 (377)
T 2ahf_A 148 IDCLLN-LPLLLWAGEQTGDPEYRRV--AEAHALKSRRFLVR 186 (377)
T ss_dssp GGGGGG-HHHHHHHHHHHCCTHHHHH--HHHHHHHHHHHTBB
T ss_pred echHHH-HHHHHHHHHHhCCHHHHHH--HHHHHHHHHHhCcC
Confidence 787766 7777777789999999765 55555666555543
No 25
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=71.37 E-value=86 Score=31.41 Aligned_cols=102 Identities=11% Similarity=0.005 Sum_probs=54.4
Q ss_pred CcCCCCcHHHHHHHHHHHHHHhCChhhhcchhHHHHHHHHHHhhhcCCCCCC-CcccccCCCccccccccCCCCcchhhH
Q 013067 82 RVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMF-PSLLVTDGSCMIDRRMGIHGHPLEIQA 160 (450)
Q Consensus 82 ~y~sVDatLWfi~al~~Y~~~TgD~~f~~~p~l~~~i~~i~~~~~~~~~~~~-~~L~~~dg~twmD~~~pR~G~pVEInA 160 (450)
+...++.++-....+..| . +|+...++- +.++++.+.+.+ ++.. .+++. ++--|...+. .+.++.||
T Consensus 47 ~k~~~~nar~i~~~a~a~-~-~g~~~~l~~--A~~~~~fl~~~~----~D~~~GG~~~---s~d~dg~~~~-~k~lyd~A 114 (421)
T 2zbl_A 47 GTHLWITARMLHVYSVAA-S-MGRPGAYDL--VDHGIKAMNGAL----RDKKYGGWYA---CVNDQGVVDA-SKQGYQHF 114 (421)
T ss_dssp CEEHHHHHHHHHHHHHHH-H-TTCTTHHHH--HHHHHHHHTTTT----BCTTTSSBCS---EEETTEEEEC-CEEHHHHH
T ss_pred hhhHHHHHHHHHHHHHHH-H-cCChhHHHH--HHHHHHHHHHhc----cCcCCCeEEE---EeCCCCCcCC-chhHHHHH
Confidence 355566666533333444 4 898877654 677777664432 1111 11110 0111222333 58899999
Q ss_pred HHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhh
Q 013067 161 LFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVD 206 (450)
Q Consensus 161 LwYnAL~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~ 206 (450)
....|+.. . +..++ .++ .+.+.++.+.+.++||.+
T Consensus 115 f~i~al~~-~---~~tg~---~~~----l~~a~~~~~~l~~~~~d~ 149 (421)
T 2zbl_A 115 FALLGAAS-A---VTTGH---PEA----RKLLDYTIEVIEKYFWSE 149 (421)
T ss_dssp HHHHHHHH-H---HTTTC---TTH----HHHHHHHHHHHHHHTEET
T ss_pred HHHHHHHH-H---HHhCC---ccH----HHHHHHHHHHHHHHhccC
Confidence 88887766 3 23342 332 333455677778888753
No 26
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=48.34 E-value=2e+02 Score=28.23 Aligned_cols=17 Identities=6% Similarity=0.030 Sum_probs=13.0
Q ss_pred hhhhHHHHHHHHHHHhh
Q 013067 390 LFQTWTIAGFLTSKMLV 406 (450)
Q Consensus 390 ~~QAWSaA~~Lr~~~~l 406 (450)
..|+|-++++.++...+
T Consensus 213 Rg~gW~~~gl~~~l~~l 229 (373)
T 1nc5_A 213 RSIGWYVMSLADMIEEL 229 (373)
T ss_dssp HHHHHHHHHHHHHGGGS
T ss_pred chHhHHHHHHHHHHHhC
Confidence 38999999987776554
No 27
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=47.22 E-value=1.5e+02 Score=29.17 Aligned_cols=104 Identities=7% Similarity=-0.126 Sum_probs=58.4
Q ss_pred cCCCCcHHHHHHHHHHHHHHhCChhhhcchhHHHHHHHHHHhhhcCCCCCCCcccccCCCccccccccCCCCcchhhHHH
Q 013067 83 VAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALF 162 (450)
Q Consensus 83 y~sVDatLWfi~al~~Y~~~TgD~~f~~~p~l~~~i~~i~~~~~~~~~~~~~~L~~~dg~twmD~~~pR~G~pVEInALw 162 (450)
-|+++-++ +++++.++.+.|||...++. .+++.+|+.+.+..+....++++-.. + +.......+=.+-|+..
T Consensus 147 knaisN~~-~~~~la~l~~~tgd~~Yl~~--A~~~~~w~~~~l~d~~g~v~Dg~~~~----~-~g~~~~~~~~tYnqg~~ 218 (349)
T 3k7x_A 147 KNTPVNAP-FIILSCWLYNELNETKYLEW--AMKTYEWQTKVLVREDGFVEDGINRL----E-DGTIDYEWKFTYNQGVY 218 (349)
T ss_dssp EEHHHHHH-HHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHHHBCTTSCBCCEECTT----S-SSCBCTTCCCHHHHHHH
T ss_pred cchhhHHH-HHHHHHHHHHHhCCHHHHHH--HHHHHHHHHhcCCCCCCeEecCCccC----C-CCccCCcCeeeHHHHHH
Confidence 46664444 56777778889999999876 88889999775543322222222100 0 11111112334567765
Q ss_pred HHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhh
Q 013067 163 YTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYW 204 (450)
Q Consensus 163 YnAL~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW 204 (450)
..++.. |.+.-+ ++. +.+++..|.+.+.++|+
T Consensus 219 l~g~~~---LY~~T~---d~~----yl~~a~~l~~~~~~~f~ 250 (349)
T 3k7x_A 219 IGANLE---LYRITK---EAI----YLDTANKTAAISLKELT 250 (349)
T ss_dssp HHHHHH---HHHHHC---CHH----HHHHHHHHHHHHHHHHE
T ss_pred HHHHHH---HHHhhC---cHH----HHHHHHHHHHHHHHHhc
Confidence 555444 444444 333 35566667777777776
No 28
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=41.73 E-value=2.5e+02 Score=27.76 Aligned_cols=91 Identities=13% Similarity=-0.024 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhCChhhhcchhHHHHHHHHHHhhhcCCCCCCCcccc---cCCCccccccccCCCCcchhhHHHHHHHHHH
Q 013067 93 IILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLV---TDGSCMIDRRMGIHGHPLEIQALFYTALRCS 169 (450)
Q Consensus 93 i~al~~Y~~~TgD~~f~~~p~l~~~i~~i~~~~~~~~~~~~~~L~~---~dg~twmD~~~pR~G~pVEInALwYnAL~~~ 169 (450)
.+++-++.+.++|..+++. .++++++..+..... ...|++. .+|.. ...-+..-+|+= |+..+
T Consensus 254 awlLl~~~~~~~~~~~~~~--A~~l~~~~~~~gwd~---~~Gg~~~~~d~~g~~------~~~~k~~W~qaE---al~a~ 319 (402)
T 3gt5_A 254 AKLLLILDRYIEVEWLVPV--ARSLFDVAVARSWDA---VRGGLCYGFAPDGTI------CDDDKYFWVQAE---SLAAA 319 (402)
T ss_dssp HHHHHHHHHHCCCTTHHHH--HHHHHHHHHHHHBCT---TTCSBCSEECTTSCE------EECCEEHHHHHH---HHHHH
T ss_pred HHHHHHHHHhhCcHHHHHH--HHHHHHHHHHhcccC---CCCcEEEEEcCCCCe------eeCCcceeHHHH---HHHHH
Confidence 4445566677999887654 666666654433211 1112210 11211 112244556654 45555
Q ss_pred HHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhh
Q 013067 170 REMLTVSDGSGSNNLVRAINNRLSALSFHIREYYW 204 (450)
Q Consensus 170 ~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW 204 (450)
..+.+..|+ +++ .+.+.++-+.+.++|+
T Consensus 320 l~ly~~tgd---~~y----l~~a~~~~~~~~~~~~ 347 (402)
T 3gt5_A 320 ALLATRSGD---ERY----WQWYDRLWAYAWQHMV 347 (402)
T ss_dssp HHHHHHHCC---HHH----HHHHHHHHHHHHHHTB
T ss_pred HHHHHHhCC---HHH----HHHHHHHHHHHHHhCc
Confidence 556655563 443 4444555666666665
No 29
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=29.60 E-value=3.9e+02 Score=25.71 Aligned_cols=100 Identities=9% Similarity=0.013 Sum_probs=53.3
Q ss_pred CCCCcHHHHHHHHHHHHHHhCChhhhcchhHHHHHHHHHHhhhcCCCCCCCcccccCCCccccccccCCCCcchhhHHHH
Q 013067 84 APVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFY 163 (450)
Q Consensus 84 ~sVDatLWfi~al~~Y~~~TgD~~f~~~p~l~~~i~~i~~~~~~~~~~~~~~L~~~dg~twmD~~~pR~G~pVEInALwY 163 (450)
...+.--++|.++.++++.|||...++. ..++++.+++..... .+++... +-+....| | .+.|+...
T Consensus 112 ~~~~~~af~i~al~~~y~~tg~~~~l~~--A~~~~~~i~~~~~d~-----~g~~~~~---~~~~~~~~-~--~~~~~~~~ 178 (388)
T 2gz6_A 112 YNIFSDCFAAMAFSQYALASGEEWAKDV--AMQAYNNVLRRKDNP-----KGKYTKT---YPGTRPMK-A--LAVPMILA 178 (388)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHTC----------------------CCCCE-E--THHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHhcCC-----CcccCcc---cCCCCCCC-C--CCHHHHHH
Confidence 3345667789999999999999988765 555666554332110 1111110 10111112 2 56666544
Q ss_pred HHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhh
Q 013067 164 TALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVD 206 (450)
Q Consensus 164 nAL~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~ 206 (450)
+|+-. +.+..+ ++ .+.+++..+.+.+.++|+..
T Consensus 179 ~all~---l~~~t~---d~----~~~~~A~~~~~~~~~~~~~~ 211 (388)
T 2gz6_A 179 NLTLE---MEWLLP---QE----TLENVLAATVQEVMGDFLDQ 211 (388)
T ss_dssp HHHHH---TGGGSC---HH----HHHHHHHHHHHHHHHTTEET
T ss_pred HHHHH---HHHHcC---CH----HHHHHHHHHHHHHHHHHhcc
Confidence 44433 444444 22 34566777788888888743
No 30
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=21.37 E-value=4e+02 Score=25.88 Aligned_cols=107 Identities=14% Similarity=0.017 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCChhhhcchhHHHHHHHH-HHhhhcCCCCCCCcccccCCCccccccccCCCCcch----hhHHHH---
Q 013067 92 WIILLRAYGKITGDYALQERVDVQTGIKLI-MNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLE----IQALFY--- 163 (450)
Q Consensus 92 fi~al~~Y~~~TgD~~f~~~p~l~~~i~~i-~~~~~~~~~~~~~~L~~~dg~twmD~~~pR~G~pVE----InALwY--- 163 (450)
+.+++.+..+.+||..+++. .+++.+.+ ++..........- ..+.+.|.|+. -.-+|.
T Consensus 252 ~~wlL~~a~~~~~~~~~l~~--A~~~~~~~~~~~~~d~~~gg~~------------~~~~~~g~~~~~l~d~~~~~W~qa 317 (402)
T 1fp3_A 252 AGWFLLRHSSRSGDAKLRAH--VIDTFLLLPFRSGWDADHGGLF------------YFQDADGLCPTQLEWAMKLWWPHS 317 (402)
T ss_dssp HHHHHHHHHHHTTCHHHHHH--HHHHHTHHHHHHHBCTTTCSBC------------SCEETTSCCCSSTTTTCEEHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHH--HHHHHHHHHHHHhccCCCCCEE------------EeecCCCCccccCcCCCcCcHHHH
Q ss_pred HHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhhcccCCCCCCcccccccc
Q 013067 164 TALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDW 243 (450)
Q Consensus 164 nAL~~~~~La~~~g~~~~~~~~~~~~~~~~~L~~~~~~~FW~~~~~~~~~~~~~~~~y~~~a~~~f~~~~~~ip~~l~~~ 243 (450)
.|+..+..+.+..|+ ..+.+.+.++.+.+.++||
T Consensus 318 ea~~a~l~ly~~tgd-------~~yl~~a~~~~~~~~~~f~--------------------------------------- 351 (402)
T 1fp3_A 318 EAMIAFLMGYSESGD-------PALLRLFYQVAEYTFRQFR--------------------------------------- 351 (402)
T ss_dssp HHHHHHHHHHHHHCC-------HHHHHHHHHHHHHHHHHTB---------------------------------------
T ss_pred HHHHHHHHHHHHhCC-------HHHHHHHHHHHHHHHHhCc---------------------------------------
Q ss_pred ccCCCceeecccCCCc
Q 013067 244 IPEEGGYLIGNLQPAH 259 (450)
Q Consensus 244 ~~~~~~Yl~~~v~p~~ 259 (450)
+++.|-+++.+++.+
T Consensus 352 -D~~~G~w~~~~~~~g 366 (402)
T 1fp3_A 352 -DPEYGEWFGYLNREG 366 (402)
T ss_dssp -CTTTSSBCCEECTTS
T ss_pred -CCCCCceEeeECCCc
No 31
>3igm_B PF14_0633 protein; AP2 domain, specific transcription FA protein-DNA complex, transcription-DNA complex; 2.20A {Plasmodium falciparum}
Probab=21.15 E-value=32 Score=27.09 Aligned_cols=27 Identities=22% Similarity=0.235 Sum_probs=19.5
Q ss_pred cccHHHHHHhHhhcccccccccccccc
Q 013067 418 EEDYELLEICVCALSKSGRKKCSRGAA 444 (450)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (450)
|+.+..|.-|.-.+-++||++-.+|+.
T Consensus 45 e~Ak~~AIef~k~le~~Gr~~~~~g~~ 71 (77)
T 3igm_B 45 EKARLAAVEFMKTVENNGRKKLEPGGS 71 (77)
T ss_dssp HHHHHHHHHHHHHTCSSSCCC------
T ss_pred HHHHHHHHHHHHHHHhcCceecCCCCc
Confidence 788999999999999999999888873
No 32
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=20.65 E-value=3.3e+02 Score=28.38 Aligned_cols=44 Identities=14% Similarity=-0.006 Sum_probs=34.0
Q ss_pred CCCCCCcccCCCCchhhHHHHHHHHHHhCChHHHHHHHHHHHhhC
Q 013067 323 PKNTPWSYHNGGSWPTLLWQFTLACIKMGRLGLAQKAVALAENRL 367 (450)
Q Consensus 323 ~~~rp~aYHNG~VWP~l~g~~~~Al~r~G~~~~A~~ll~~~~~~l 367 (450)
+..-|. +|=...|.|+.++.+.+++..|..+.|+.++..+..+.
T Consensus 115 ~~vvPG-g~F~~~~~WDs~f~~~gLl~~~~~~~A~~~l~~~~~~~ 158 (535)
T 2jg0_A 115 PYVVPG-GRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEI 158 (535)
T ss_dssp CEECCB-TTBCSCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CcccCC-ccccccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Confidence 334443 45556899999999999999998899999988765443
Done!