Query 013069
Match_columns 450
No_of_seqs 337 out of 2477
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 00:05:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013069.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013069hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0205 Plasma membrane H+-tra 100.0 2.8E-94 6.2E-99 727.5 30.3 440 1-450 324-942 (942)
2 COG0474 MgtA Cation transport 100.0 5.4E-70 1.2E-74 606.3 34.6 393 1-397 345-776 (917)
3 TIGR01647 ATPase-IIIA_H plasma 100.0 3.9E-64 8.4E-69 551.0 36.8 348 1-358 283-632 (755)
4 KOG0202 Ca2+ transporting ATPa 100.0 1.3E-64 2.7E-69 526.8 29.5 357 1-358 329-777 (972)
5 PRK15122 magnesium-transportin 100.0 2.2E-63 4.7E-68 552.6 36.3 354 1-362 366-740 (903)
6 PRK10517 magnesium-transportin 100.0 2.8E-63 6E-68 551.1 35.7 351 1-359 368-737 (902)
7 KOG0204 Calcium transporting A 100.0 4.7E-64 1E-68 522.0 25.1 436 1-449 432-918 (1034)
8 TIGR01524 ATPase-IIIB_Mg magne 100.0 2.8E-62 6E-67 542.9 37.7 352 1-360 333-703 (867)
9 TIGR01523 ATPase-IID_K-Na pota 100.0 2.2E-62 4.8E-67 550.5 33.4 357 1-358 356-850 (1053)
10 TIGR01517 ATPase-IIB_Ca plasma 100.0 1.5E-61 3.2E-66 542.5 34.2 354 1-357 373-767 (941)
11 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1.2E-60 2.5E-65 537.1 34.1 356 1-357 341-782 (997)
12 TIGR01116 ATPase-IIA1_Ca sarco 100.0 5.4E-59 1.2E-63 520.2 33.5 355 1-357 286-728 (917)
13 TIGR01657 P-ATPase-V P-type AT 100.0 2.9E-59 6.3E-64 528.8 29.2 354 1-357 445-895 (1054)
14 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1.1E-57 2.5E-62 508.3 33.8 349 1-360 321-719 (884)
15 TIGR01652 ATPase-Plipid phosph 100.0 2.1E-57 4.6E-62 514.7 27.6 338 1-340 356-847 (1057)
16 PLN03190 aminophospholipid tra 100.0 1.1E-55 2.5E-60 498.1 30.3 330 1-332 450-942 (1178)
17 PRK14010 potassium-transportin 100.0 3.8E-55 8.3E-60 467.8 28.7 280 1-333 295-575 (673)
18 PRK01122 potassium-transportin 100.0 6.5E-54 1.4E-58 458.7 31.0 279 1-331 295-577 (679)
19 KOG0203 Na+/K+ ATPase, alpha s 100.0 3.5E-53 7.6E-58 440.5 18.6 356 1-357 363-804 (1019)
20 KOG0206 P-type ATPase [General 100.0 3.1E-53 6.7E-58 465.4 18.9 377 1-378 384-940 (1151)
21 TIGR01497 kdpB K+-transporting 100.0 4.6E-51 1E-55 435.9 29.2 281 1-332 296-579 (675)
22 COG2217 ZntA Cation transport 100.0 4.4E-51 9.6E-56 437.0 28.3 309 1-377 402-710 (713)
23 KOG0207 Cation transport ATPas 100.0 2E-49 4.3E-54 418.0 26.5 336 1-390 579-915 (951)
24 KOG0210 P-type ATPase [Inorgan 100.0 7.5E-49 1.6E-53 399.6 14.3 350 1-356 404-878 (1051)
25 KOG0208 Cation transport ATPas 100.0 7.5E-48 1.6E-52 406.2 21.1 263 72-337 600-930 (1140)
26 PRK11033 zntA zinc/cadmium/mer 100.0 3.9E-45 8.5E-50 399.9 28.1 305 1-377 433-739 (741)
27 TIGR01494 ATPase_P-type ATPase 100.0 6.5E-44 1.4E-48 376.6 28.2 257 1-343 227-483 (499)
28 PRK10671 copA copper exporting 100.0 8.6E-42 1.9E-46 379.7 30.3 315 1-377 514-830 (834)
29 KOG0209 P-type ATPase [Inorgan 100.0 7.3E-42 1.6E-46 354.2 17.8 283 2-289 477-834 (1160)
30 TIGR01525 ATPase-IB_hvy heavy 100.0 2.8E-40 6E-45 352.8 29.9 284 1-344 243-530 (556)
31 TIGR01511 ATPase-IB1_Cu copper 100.0 7E-40 1.5E-44 349.3 29.2 278 1-346 274-551 (562)
32 TIGR01512 ATPase-IB2_Cd heavy 100.0 3.1E-39 6.7E-44 343.0 25.4 290 1-374 243-534 (536)
33 COG2216 KdpB High-affinity K+ 100.0 7.7E-38 1.7E-42 311.6 19.3 266 2-318 297-566 (681)
34 PF00702 Hydrolase: haloacid d 100.0 5.4E-29 1.2E-33 233.1 10.6 211 4-281 1-215 (215)
35 COG4087 Soluble P-type ATPase 99.6 1.1E-15 2.3E-20 128.0 10.6 116 159-303 20-138 (152)
36 PRK11133 serB phosphoserine ph 99.2 4.2E-11 9.2E-16 119.3 10.8 131 169-314 181-316 (322)
37 PRK01158 phosphoglycolate phos 99.2 5.8E-11 1.2E-15 112.7 11.3 151 164-314 14-226 (230)
38 TIGR02137 HSK-PSP phosphoserin 99.2 9E-11 1.9E-15 109.7 10.8 131 169-316 68-198 (203)
39 PRK10513 sugar phosphate phosp 99.2 9.7E-11 2.1E-15 114.1 11.2 66 249-314 196-265 (270)
40 COG0561 Cof Predicted hydrolas 99.2 1.8E-10 4E-15 111.8 13.0 154 162-315 12-259 (264)
41 TIGR01487 SPP-like sucrose-pho 99.2 1.6E-10 3.4E-15 108.9 10.1 145 169-313 18-215 (215)
42 PRK15126 thiamin pyrimidine py 99.1 2.5E-10 5.4E-15 111.4 11.6 146 169-314 19-259 (272)
43 PRK10976 putative hydrolase; P 99.1 4.5E-10 9.7E-15 109.2 12.4 66 249-314 190-261 (266)
44 TIGR01482 SPP-subfamily Sucros 99.1 5E-10 1.1E-14 105.9 10.4 146 169-314 15-222 (225)
45 TIGR02726 phenyl_P_delta pheny 99.1 6E-10 1.3E-14 100.9 9.7 104 176-309 41-146 (169)
46 TIGR00338 serB phosphoserine p 99.1 8E-10 1.7E-14 104.1 10.3 129 169-312 85-218 (219)
47 TIGR01670 YrbI-phosphatas 3-de 99.0 1.2E-09 2.5E-14 97.7 9.8 118 159-314 24-146 (154)
48 PF08282 Hydrolase_3: haloacid 99.0 1.4E-09 3E-14 103.5 10.9 146 168-313 14-254 (254)
49 PLN02887 hydrolase family prot 99.0 2.2E-09 4.8E-14 114.5 13.3 66 249-314 507-576 (580)
50 PRK10530 pyridoxal phosphate ( 99.0 2.7E-09 5.9E-14 103.8 12.8 66 249-314 199-268 (272)
51 COG0560 SerB Phosphoserine pho 98.9 3.7E-09 8E-14 99.4 9.1 119 168-301 76-199 (212)
52 PF13246 Hydrolase_like2: Puta 98.9 2.6E-09 5.7E-14 86.7 6.4 64 51-115 20-89 (91)
53 TIGR01486 HAD-SF-IIB-MPGP mann 98.9 1.3E-08 2.7E-13 98.6 12.2 66 249-314 176-253 (256)
54 TIGR00099 Cof-subfamily Cof su 98.9 8.2E-09 1.8E-13 99.8 10.4 65 249-313 188-256 (256)
55 COG1778 Low specificity phosph 98.9 5.8E-09 1.2E-13 90.8 7.8 114 177-322 43-164 (170)
56 PRK09484 3-deoxy-D-manno-octul 98.9 1.4E-08 3.1E-13 93.3 10.4 111 176-318 55-173 (183)
57 PRK03669 mannosyl-3-phosphogly 98.8 5.4E-08 1.2E-12 95.1 11.4 67 248-314 186-265 (271)
58 PRK13582 thrH phosphoserine ph 98.7 7.6E-08 1.6E-12 89.6 11.0 128 169-314 68-196 (205)
59 PRK00192 mannosyl-3-phosphogly 98.7 1.2E-07 2.6E-12 92.6 12.5 66 249-314 190-267 (273)
60 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.7 5.9E-08 1.3E-12 89.8 9.7 117 169-298 80-200 (201)
61 KOG1615 Phosphoserine phosphat 98.6 8.6E-08 1.9E-12 86.3 6.6 108 170-287 89-199 (227)
62 TIGR03333 salvage_mtnX 2-hydro 98.6 4.7E-07 1E-11 85.3 11.5 140 168-314 69-209 (214)
63 PF12710 HAD: haloacid dehalog 98.5 3.2E-07 7E-12 84.1 6.6 91 172-278 92-192 (192)
64 PLN02954 phosphoserine phospha 98.4 2.6E-06 5.6E-11 80.5 11.8 130 170-311 85-221 (224)
65 PRK09552 mtnX 2-hydroxy-3-keto 98.4 2.1E-06 4.6E-11 81.0 10.0 110 169-286 74-185 (219)
66 TIGR01485 SPP_plant-cyano sucr 98.4 2E-06 4.3E-11 82.9 9.7 147 168-314 20-244 (249)
67 TIGR01489 DKMTPPase-SF 2,3-dik 98.3 2.2E-06 4.7E-11 78.3 8.9 113 169-285 72-186 (188)
68 TIGR01488 HAD-SF-IB Haloacid D 98.3 1.2E-06 2.6E-11 79.4 6.8 99 170-280 74-177 (177)
69 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.3 2.1E-06 4.6E-11 79.6 8.2 108 168-288 86-198 (202)
70 PRK13222 phosphoglycolate phos 98.2 1.4E-05 3E-10 75.4 11.5 126 168-316 92-224 (226)
71 PLN02382 probable sucrose-phos 98.2 1.1E-05 2.4E-10 83.4 10.7 71 244-314 168-257 (413)
72 TIGR02471 sucr_syn_bact_C sucr 98.1 3.2E-06 6.9E-11 80.7 6.0 68 248-315 158-233 (236)
73 COG0546 Gph Predicted phosphat 98.1 2.4E-05 5.3E-10 73.9 11.0 126 167-313 87-217 (220)
74 cd01427 HAD_like Haloacid deha 98.0 1.9E-05 4E-10 67.2 7.9 118 165-285 20-138 (139)
75 TIGR01454 AHBA_synth_RP 3-amin 98.0 3.5E-05 7.6E-10 71.8 10.0 124 169-313 75-203 (205)
76 TIGR02461 osmo_MPG_phos mannos 98.0 2.3E-05 5E-10 74.5 8.6 44 167-210 13-56 (225)
77 TIGR02463 MPGP_rel mannosyl-3- 98.0 3.8E-05 8.3E-10 72.4 10.0 39 171-209 18-56 (221)
78 PRK08238 hypothetical protein; 97.9 6.5E-05 1.4E-09 79.0 10.5 98 169-291 72-169 (479)
79 PRK10187 trehalose-6-phosphate 97.9 2.6E-05 5.7E-10 76.0 6.7 140 169-314 36-241 (266)
80 PRK13288 pyrophosphatase PpaX; 97.8 0.00011 2.3E-09 68.9 10.0 123 170-313 83-210 (214)
81 PRK12702 mannosyl-3-phosphogly 97.8 0.0002 4.4E-09 69.8 11.3 42 169-210 18-59 (302)
82 PRK13223 phosphoglycolate phos 97.8 0.00014 3E-09 71.1 10.3 125 168-313 100-229 (272)
83 TIGR01449 PGP_bact 2-phosphogl 97.7 0.00014 3.1E-09 67.8 9.3 121 169-310 85-210 (213)
84 TIGR01544 HAD-SF-IE haloacid d 97.7 0.00057 1.2E-08 66.6 12.2 128 168-314 120-274 (277)
85 PRK11590 hypothetical protein; 97.7 0.00026 5.7E-09 66.4 9.6 103 170-288 96-203 (211)
86 PRK10826 2-deoxyglucose-6-phos 97.6 0.00017 3.6E-09 68.1 8.0 120 169-309 92-215 (222)
87 TIGR03351 PhnX-like phosphonat 97.6 0.0005 1.1E-08 64.6 10.0 125 168-311 86-217 (220)
88 KOG4383 Uncharacterized conser 97.6 0.00057 1.2E-08 72.1 11.1 176 156-331 813-1094(1354)
89 PRK13226 phosphoglycolate phos 97.5 0.00049 1.1E-08 65.4 9.5 124 169-313 95-224 (229)
90 PRK14501 putative bifunctional 97.5 0.00044 9.6E-09 76.9 10.3 61 248-314 656-721 (726)
91 TIGR01484 HAD-SF-IIB HAD-super 97.5 0.00039 8.4E-09 64.6 8.4 39 169-207 17-55 (204)
92 PRK14502 bifunctional mannosyl 97.4 0.0007 1.5E-08 73.1 9.8 40 170-209 434-473 (694)
93 PRK13225 phosphoglycolate phos 97.4 0.0015 3.2E-08 63.9 11.5 121 169-313 142-267 (273)
94 TIGR01545 YfhB_g-proteo haloac 97.4 0.00076 1.7E-08 63.4 8.8 107 169-288 94-202 (210)
95 PF05116 S6PP: Sucrose-6F-phos 97.3 0.00074 1.6E-08 65.1 8.3 68 248-315 164-244 (247)
96 PLN02770 haloacid dehalogenase 97.3 0.0016 3.4E-08 62.8 10.6 118 169-305 108-229 (248)
97 PRK13478 phosphonoacetaldehyde 97.3 0.002 4.3E-08 62.7 11.4 97 169-283 101-198 (267)
98 PRK06698 bifunctional 5'-methy 97.3 0.0015 3.3E-08 68.7 10.3 123 169-315 330-455 (459)
99 PLN03243 haloacid dehalogenase 97.2 0.0016 3.4E-08 63.3 9.2 116 169-303 109-226 (260)
100 TIGR01422 phosphonatase phosph 97.2 0.0029 6.3E-08 60.9 11.0 98 169-284 99-197 (253)
101 PRK11587 putative phosphatase; 97.1 0.0026 5.7E-08 59.8 9.6 115 169-303 83-199 (218)
102 TIGR01548 HAD-SF-IA-hyp1 haloa 97.1 0.001 2.2E-08 61.6 6.2 93 168-280 105-197 (197)
103 COG4030 Uncharacterized protei 97.1 0.0028 6E-08 59.0 8.8 144 170-314 84-262 (315)
104 PHA02530 pseT polynucleotide k 97.0 0.0021 4.5E-08 63.5 8.3 110 165-285 183-293 (300)
105 TIGR01672 AphA HAD superfamily 97.0 0.0013 2.9E-08 62.8 6.3 88 170-283 115-206 (237)
106 TIGR02253 CTE7 HAD superfamily 97.0 0.0028 6.2E-08 59.4 8.5 100 169-287 94-195 (221)
107 PLN02779 haloacid dehalogenase 96.9 0.0038 8.3E-08 61.5 9.0 117 169-303 144-264 (286)
108 PRK11009 aphA acid phosphatase 96.9 0.0022 4.7E-08 61.4 6.9 90 169-284 114-207 (237)
109 PTZ00174 phosphomannomutase; P 96.9 0.00086 1.9E-08 64.6 3.5 60 242-301 179-245 (247)
110 PRK14988 GMP/IMP nucleotidase; 96.8 0.0042 9.1E-08 58.9 8.2 99 169-288 93-195 (224)
111 PF06888 Put_Phosphatase: Puta 96.8 0.024 5.2E-07 54.0 13.1 129 119-277 41-186 (234)
112 TIGR01428 HAD_type_II 2-haloal 96.8 0.0039 8.5E-08 57.5 7.7 96 169-285 92-189 (198)
113 TIGR01662 HAD-SF-IIIA HAD-supe 96.8 0.0073 1.6E-07 51.9 8.6 93 169-284 25-127 (132)
114 COG4359 Uncharacterized conser 96.8 0.0033 7.1E-08 56.7 6.3 110 169-286 73-184 (220)
115 PF13419 HAD_2: Haloacid dehal 96.8 0.0014 3.1E-08 58.1 4.1 97 169-284 77-173 (176)
116 PRK08942 D,D-heptose 1,7-bisph 96.7 0.011 2.4E-07 53.8 9.7 127 170-314 30-177 (181)
117 PRK06769 hypothetical protein; 96.7 0.0032 6.9E-08 57.3 5.7 99 170-286 29-135 (173)
118 PLN02575 haloacid dehalogenase 96.6 0.011 2.3E-07 60.4 9.5 117 168-303 215-333 (381)
119 TIGR01509 HAD-SF-IA-v3 haloaci 96.5 0.0094 2E-07 53.8 7.7 95 169-283 85-179 (183)
120 PLN02580 trehalose-phosphatase 96.5 0.018 4E-07 58.7 10.3 68 243-314 292-374 (384)
121 TIGR02254 YjjG/YfnB HAD superf 96.5 0.01 2.2E-07 55.5 8.0 120 169-310 97-221 (224)
122 TIGR01990 bPGM beta-phosphoglu 96.4 0.0053 1.1E-07 55.7 5.6 95 169-284 87-181 (185)
123 TIGR02009 PGMB-YQAB-SF beta-ph 96.4 0.0071 1.5E-07 54.9 6.2 93 169-284 88-182 (185)
124 smart00775 LNS2 LNS2 domain. T 96.4 0.026 5.6E-07 50.5 9.5 102 167-283 25-141 (157)
125 TIGR01685 MDP-1 magnesium-depe 96.2 0.025 5.5E-07 51.5 8.6 112 159-286 35-155 (174)
126 PLN02940 riboflavin kinase 96.2 0.017 3.6E-07 59.4 8.3 116 169-303 93-212 (382)
127 TIGR01668 YqeG_hyp_ppase HAD s 96.2 0.014 3.1E-07 52.8 6.9 88 169-284 43-132 (170)
128 TIGR01656 Histidinol-ppas hist 96.1 0.013 2.8E-07 51.6 6.0 99 169-285 27-142 (147)
129 PRK09449 dUMP phosphatase; Pro 96.1 0.028 6.1E-07 52.8 8.6 123 169-313 95-222 (224)
130 TIGR01261 hisB_Nterm histidino 96.0 0.018 3.8E-07 51.8 6.3 98 169-286 29-145 (161)
131 TIGR01533 lipo_e_P4 5'-nucleot 95.9 0.026 5.7E-07 54.8 7.8 87 167-278 116-205 (266)
132 TIGR01549 HAD-SF-IA-v1 haloaci 95.9 0.015 3.4E-07 51.1 5.6 90 170-281 65-154 (154)
133 TIGR00213 GmhB_yaeD D,D-heptos 95.8 0.038 8.3E-07 50.1 8.0 27 170-196 27-53 (176)
134 TIGR02252 DREG-2 REG-2-like, H 95.7 0.028 6.2E-07 51.9 6.8 95 169-283 105-200 (203)
135 KOG3120 Predicted haloacid deh 95.5 0.03 6.5E-07 52.1 6.0 138 120-287 55-209 (256)
136 smart00577 CPDc catalytic doma 95.5 0.02 4.3E-07 50.6 4.8 95 169-285 45-139 (148)
137 PRK05446 imidazole glycerol-ph 95.3 0.039 8.4E-07 55.9 6.7 99 168-286 29-146 (354)
138 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.2 0.21 4.6E-06 47.7 11.3 48 162-209 17-66 (242)
139 PLN02205 alpha,alpha-trehalose 95.2 0.062 1.3E-06 60.7 8.6 38 169-206 616-654 (854)
140 TIGR01691 enolase-ppase 2,3-di 95.2 0.058 1.3E-06 51.0 7.1 99 167-286 93-194 (220)
141 TIGR01681 HAD-SF-IIIC HAD-supe 95.0 0.078 1.7E-06 45.6 6.8 39 169-207 29-68 (128)
142 PLN02811 hydrolase 95.0 0.082 1.8E-06 49.7 7.4 101 169-286 78-182 (220)
143 TIGR01675 plant-AP plant acid 95.0 0.13 2.8E-06 48.8 8.6 89 167-275 118-210 (229)
144 COG3769 Predicted hydrolase (H 94.9 0.24 5.3E-06 46.2 10.0 37 173-209 27-63 (274)
145 TIGR00685 T6PP trehalose-phosp 94.9 0.043 9.3E-07 52.7 5.5 65 245-313 163-239 (244)
146 COG2179 Predicted hydrolase of 94.8 0.11 2.3E-06 46.5 7.1 110 127-283 19-133 (175)
147 PLN02919 haloacid dehalogenase 94.8 0.15 3.3E-06 59.1 10.3 128 169-314 161-292 (1057)
148 TIGR01664 DNA-3'-Pase DNA 3'-p 94.7 0.12 2.6E-06 46.7 7.3 94 170-284 43-158 (166)
149 PLN03017 trehalose-phosphatase 94.2 0.43 9.4E-06 48.4 10.8 62 249-314 283-356 (366)
150 PRK10563 6-phosphogluconate ph 93.8 0.12 2.6E-06 48.4 5.9 97 169-286 88-184 (221)
151 TIGR01686 FkbH FkbH-like domai 93.7 0.12 2.6E-06 51.8 5.8 91 169-287 31-129 (320)
152 TIGR02247 HAD-1A3-hyp Epoxide 93.7 0.12 2.7E-06 47.9 5.6 96 169-284 94-192 (211)
153 PRK09456 ?-D-glucose-1-phospha 93.3 0.22 4.7E-06 46.0 6.5 98 169-285 84-182 (199)
154 TIGR01993 Pyr-5-nucltdase pyri 91.3 0.37 8E-06 43.7 5.3 97 170-284 85-181 (184)
155 PF03767 Acid_phosphat_B: HAD 91.2 0.39 8.5E-06 45.7 5.5 89 169-276 115-207 (229)
156 PRK10725 fructose-1-P/6-phosph 90.9 0.49 1.1E-05 42.9 5.7 91 174-284 92-182 (188)
157 PF09419 PGP_phosphatase: Mito 90.9 1.2 2.6E-05 40.2 8.0 107 131-281 36-157 (168)
158 PLN02423 phosphomannomutase 90.8 0.36 7.7E-06 46.4 4.9 48 243-291 181-235 (245)
159 PLN02177 glycerol-3-phosphate 90.6 3 6.6E-05 44.3 12.0 98 170-288 111-215 (497)
160 PHA02597 30.2 hypothetical pro 90.5 0.5 1.1E-05 43.4 5.4 92 170-286 75-172 (197)
161 PLN02645 phosphoglycolate phos 90.5 0.64 1.4E-05 46.3 6.5 48 162-209 37-87 (311)
162 PF13344 Hydrolase_6: Haloacid 88.1 0.38 8.3E-06 39.5 2.4 48 162-209 7-57 (101)
163 COG0637 Predicted phosphatase/ 87.0 1.9 4.1E-05 40.7 6.8 100 168-286 85-184 (221)
164 TIGR01680 Veg_Stor_Prot vegeta 86.7 3.6 7.8E-05 40.1 8.5 43 167-209 143-188 (275)
165 PRK10748 flavin mononucleotide 86.5 1.9 4.2E-05 40.9 6.7 91 169-286 113-206 (238)
166 TIGR02251 HIF-SF_euk Dullard-l 86.2 0.39 8.5E-06 43.0 1.6 93 168-285 41-136 (162)
167 PF08235 LNS2: LNS2 (Lipin/Ned 85.8 4.5 9.7E-05 36.1 8.1 103 168-283 26-141 (157)
168 COG1011 Predicted hydrolase (H 84.2 3.9 8.5E-05 38.0 7.6 97 169-287 99-199 (229)
169 TIGR01684 viral_ppase viral ph 83.2 2.2 4.7E-05 42.0 5.3 41 170-210 146-187 (301)
170 TIGR02244 HAD-IG-Ncltidse HAD 82.6 6.4 0.00014 39.8 8.6 106 171-282 186-317 (343)
171 TIGR01493 HAD-SF-IA-v2 Haloaci 82.3 1.9 4.2E-05 38.4 4.4 85 169-279 90-174 (175)
172 PRK10444 UMP phosphatase; Prov 82.0 1.5 3.2E-05 42.2 3.7 45 162-206 10-54 (248)
173 TIGR01457 HAD-SF-IIA-hyp2 HAD- 81.8 2.6 5.6E-05 40.5 5.3 48 162-209 10-60 (249)
174 PF05822 UMPH-1: Pyrimidine 5' 81.1 16 0.00036 35.0 10.3 132 168-314 89-242 (246)
175 TIGR01452 PGP_euk phosphoglyco 80.6 6.3 0.00014 38.5 7.6 48 162-209 11-61 (279)
176 TIGR01458 HAD-SF-IIA-hyp3 HAD- 80.5 2.1 4.6E-05 41.4 4.2 48 162-209 10-64 (257)
177 PHA03398 viral phosphatase sup 80.2 3.2 6.9E-05 40.9 5.3 40 170-209 148-188 (303)
178 COG0647 NagD Predicted sugar p 78.8 5.4 0.00012 38.9 6.4 109 162-303 17-128 (269)
179 TIGR01663 PNK-3'Pase polynucle 78.0 6 0.00013 42.4 7.0 40 170-209 198-249 (526)
180 PTZ00174 phosphomannomutase; P 77.4 3.9 8.5E-05 39.1 5.0 36 169-204 22-57 (247)
181 TIGR01689 EcbF-BcbF capsule bi 74.7 3.7 7.9E-05 35.3 3.6 33 168-200 23-55 (126)
182 KOG3040 Predicted sugar phosph 70.8 8.9 0.00019 35.8 5.2 51 159-209 13-66 (262)
183 TIGR01512 ATPase-IB2_Cd heavy 69.6 48 0.001 35.7 11.5 49 311-359 480-530 (536)
184 COG3700 AphA Acid phosphatase 67.8 14 0.00031 33.6 5.7 90 170-286 115-210 (237)
185 TIGR01458 HAD-SF-IIA-hyp3 HAD- 67.7 4.5 9.8E-05 39.0 2.9 119 172-313 123-254 (257)
186 COG0241 HisB Histidinol phosph 66.5 32 0.00069 31.5 8.0 98 170-283 32-144 (181)
187 PTZ00445 p36-lilke protein; Pr 64.9 11 0.00024 35.3 4.7 65 120-197 27-103 (219)
188 COG2503 Predicted secreted aci 64.9 31 0.00067 33.1 7.6 85 170-279 123-211 (274)
189 PF12689 Acid_PPase: Acid Phos 63.8 29 0.00062 31.4 7.1 84 170-271 46-134 (169)
190 COG1877 OtsB Trehalose-6-phosp 58.9 49 0.0011 32.2 8.2 50 159-208 30-80 (266)
191 PF12710 HAD: haloacid dehalog 58.6 4.5 9.8E-05 36.4 1.0 14 7-20 1-14 (192)
192 PLN02151 trehalose-phosphatase 58.3 21 0.00046 36.2 5.8 62 249-314 269-342 (354)
193 PF06506 PrpR_N: Propionate ca 58.3 51 0.0011 29.7 7.9 107 172-325 64-172 (176)
194 PRK14194 bifunctional 5,10-met 57.7 31 0.00068 34.2 6.7 70 241-310 137-216 (301)
195 COG2217 ZntA Cation transport 56.9 2.6E+02 0.0057 31.3 14.4 164 117-357 535-701 (713)
196 TIGR01459 HAD-SF-IIA-hyp4 HAD- 55.4 13 0.00028 35.3 3.6 92 171-284 140-237 (242)
197 PF13380 CoA_binding_2: CoA bi 54.6 12 0.00026 31.4 2.9 40 170-209 64-104 (116)
198 TIGR01456 CECR5 HAD-superfamil 53.1 50 0.0011 32.9 7.5 48 162-209 9-64 (321)
199 TIGR01525 ATPase-IB_hvy heavy 52.4 1.2E+02 0.0026 32.7 10.9 47 313-359 503-552 (556)
200 TIGR02250 FCP1_euk FCP1-like p 49.6 30 0.00065 30.7 4.7 41 168-209 57-97 (156)
201 PF02358 Trehalose_PPase: Treh 48.7 15 0.00033 34.7 2.9 56 249-304 165-234 (235)
202 TIGR01460 HAD-SF-IIA Haloacid 47.9 41 0.00089 31.8 5.7 48 162-209 7-58 (236)
203 CHL00200 trpA tryptophan synth 46.7 1E+02 0.0022 29.9 8.3 31 247-277 187-217 (263)
204 TIGR03849 arch_ComA phosphosul 46.4 48 0.001 31.7 5.7 69 171-266 40-118 (237)
205 PF00389 2-Hacid_dh: D-isomer 43.4 2E+02 0.0043 24.2 10.9 36 251-287 52-89 (133)
206 PF13242 Hydrolase_like: HAD-h 42.7 18 0.00039 27.5 1.9 53 251-303 11-71 (75)
207 COG0279 GmhA Phosphoheptose is 41.7 39 0.00085 30.4 4.1 43 159-203 112-154 (176)
208 PRK14169 bifunctional 5,10-met 40.1 1.8E+02 0.0038 28.7 8.8 66 241-306 134-209 (282)
209 PF02679 ComA: (2R)-phospho-3- 40.0 51 0.0011 31.6 4.9 112 170-310 52-174 (244)
210 TIGR02471 sucr_syn_bact_C sucr 39.9 24 0.00052 33.2 2.7 35 174-209 20-54 (236)
211 PRK14170 bifunctional 5,10-met 39.4 2.3E+02 0.005 27.9 9.4 67 241-307 135-211 (284)
212 PRK10527 hypothetical protein; 39.2 47 0.001 28.4 4.1 49 329-382 6-54 (125)
213 COG4229 Predicted enolase-phos 39.1 87 0.0019 28.8 5.9 93 166-282 100-198 (229)
214 COG2832 Uncharacterized protei 37.7 51 0.0011 27.9 3.9 50 327-381 4-53 (119)
215 COG0078 ArgF Ornithine carbamo 37.6 2.8E+02 0.0061 27.6 9.6 34 172-209 90-123 (310)
216 PLN02591 tryptophan synthase 37.6 1.7E+02 0.0037 28.2 8.2 41 247-288 174-219 (250)
217 PRK11033 zntA zinc/cadmium/mer 37.1 5.6E+02 0.012 28.9 13.3 46 313-358 684-731 (741)
218 PRK14174 bifunctional 5,10-met 37.0 1.3E+02 0.0029 29.8 7.4 64 241-304 137-214 (295)
219 PRK14184 bifunctional 5,10-met 36.8 2.3E+02 0.005 27.9 9.1 64 241-304 135-212 (286)
220 PF14336 DUF4392: Domain of un 35.7 1E+02 0.0022 30.4 6.5 38 172-209 63-101 (291)
221 TIGR01452 PGP_euk phosphoglyco 35.5 11 0.00025 36.6 -0.3 34 252-285 210-244 (279)
222 PRK14179 bifunctional 5,10-met 35.4 1.5E+02 0.0032 29.2 7.5 66 241-306 136-211 (284)
223 cd02067 B12-binding B12 bindin 35.2 30 0.00064 28.8 2.3 80 129-209 21-104 (119)
224 cd00860 ThrRS_anticodon ThrRS 35.0 78 0.0017 24.3 4.7 47 163-209 6-53 (91)
225 COG4996 Predicted phosphatase 33.4 97 0.0021 26.9 5.0 56 154-209 20-81 (164)
226 TIGR00288 conserved hypothetic 33.1 3.6E+02 0.0078 24.1 8.9 67 176-270 70-138 (160)
227 COG0309 HypE Hydrogenase matur 31.7 4E+02 0.0086 26.9 9.8 84 163-268 219-306 (339)
228 PF03129 HGTP_anticodon: Antic 31.4 75 0.0016 24.9 4.0 49 161-209 2-54 (94)
229 PLN02423 phosphomannomutase 31.1 72 0.0016 30.4 4.5 31 169-200 24-54 (245)
230 PRK14166 bifunctional 5,10-met 30.9 4.1E+02 0.0089 26.1 9.7 66 241-306 135-210 (282)
231 cd05017 SIS_PGI_PMI_1 The memb 30.8 88 0.0019 26.0 4.5 37 170-208 55-91 (119)
232 cd04728 ThiG Thiazole synthase 30.5 1.5E+02 0.0033 28.5 6.4 51 155-205 90-143 (248)
233 KOG3085 Predicted hydrolase (H 30.5 1E+02 0.0022 29.5 5.3 103 172-296 116-222 (237)
234 TIGR01501 MthylAspMutase methy 30.4 71 0.0015 27.7 3.9 80 130-209 24-112 (134)
235 TIGR00216 ispH_lytB (E)-4-hydr 30.4 2.1E+02 0.0045 28.1 7.5 153 104-287 74-262 (280)
236 KOG2914 Predicted haloacid-hal 30.0 1.7E+02 0.0037 27.7 6.6 37 170-206 93-129 (222)
237 PRK15108 biotin synthase; Prov 29.9 5.9E+02 0.013 25.6 11.3 86 172-273 111-199 (345)
238 PRK14172 bifunctional 5,10-met 29.6 3.1E+02 0.0067 26.9 8.6 65 241-305 136-210 (278)
239 PRK14190 bifunctional 5,10-met 29.6 3E+02 0.0066 27.1 8.5 66 240-305 135-210 (284)
240 KOG2882 p-Nitrophenyl phosphat 28.9 90 0.0019 30.9 4.7 48 162-209 31-81 (306)
241 PF06941 NT5C: 5' nucleotidase 28.0 52 0.0011 29.9 2.8 29 169-197 73-101 (191)
242 COG1832 Predicted CoA-binding 27.5 1E+02 0.0022 26.9 4.2 90 159-273 17-109 (140)
243 PF08645 PNK3P: Polynucleotide 27.1 54 0.0012 29.1 2.7 23 171-193 31-53 (159)
244 PRK13671 hypothetical protein; 26.7 2.7E+02 0.0058 27.7 7.6 97 160-279 2-111 (298)
245 cd05014 SIS_Kpsf KpsF-like pro 26.3 68 0.0015 26.7 3.1 30 170-199 59-88 (128)
246 PLN02645 phosphoglycolate phos 26.3 1.3E+02 0.0029 29.7 5.6 59 253-313 239-307 (311)
247 PRK14186 bifunctional 5,10-met 26.0 3.7E+02 0.0081 26.6 8.5 65 241-305 136-210 (297)
248 PRK00208 thiG thiazole synthas 25.9 2.1E+02 0.0045 27.6 6.4 51 155-205 90-143 (250)
249 PF02219 MTHFR: Methylenetetra 25.6 67 0.0015 31.5 3.3 41 158-198 71-112 (287)
250 PRK14178 bifunctional 5,10-met 25.6 3.7E+02 0.0079 26.4 8.3 65 240-304 129-203 (279)
251 cd00859 HisRS_anticodon HisRS 25.4 1.2E+02 0.0027 22.8 4.3 47 163-209 6-53 (91)
252 PF11019 DUF2608: Protein of u 25.2 2.1E+02 0.0045 27.5 6.5 104 170-278 82-195 (252)
253 PRK02261 methylaspartate mutas 25.1 52 0.0011 28.5 2.1 81 129-209 25-114 (137)
254 cd04724 Tryptophan_synthase_al 24.8 1.4E+02 0.0031 28.4 5.3 24 251-274 176-199 (242)
255 cd02070 corrinoid_protein_B12- 24.7 34 0.00074 31.6 1.0 79 129-209 104-186 (201)
256 PRK11840 bifunctional sulfur c 24.7 2.1E+02 0.0045 28.8 6.4 51 155-205 164-217 (326)
257 PRK00652 lpxK tetraacyldisacch 24.5 1.9E+02 0.0041 29.0 6.3 57 252-308 70-154 (325)
258 TIGR00262 trpA tryptophan synt 24.1 3.9E+02 0.0085 25.7 8.2 37 170-206 125-163 (256)
259 PRK14193 bifunctional 5,10-met 24.0 4.5E+02 0.0098 25.9 8.6 65 241-305 136-212 (284)
260 KOG1250 Threonine/serine dehyd 23.5 2.1E+02 0.0045 29.6 6.2 70 173-273 100-172 (457)
261 cd01994 Alpha_ANH_like_IV This 23.4 3.8E+02 0.0082 24.6 7.7 37 173-209 11-60 (194)
262 PF07287 DUF1446: Protein of u 23.1 3.7E+02 0.008 27.5 8.0 40 170-209 56-100 (362)
263 cd05008 SIS_GlmS_GlmD_1 SIS (S 22.9 84 0.0018 26.0 3.0 27 171-197 59-85 (126)
264 KOG2630 Enolase-phosphatase E- 22.7 2.3E+02 0.0051 27.0 6.0 94 169-286 123-222 (254)
265 TIGR02329 propionate_PrpR prop 22.5 9.7E+02 0.021 25.8 11.6 69 173-271 85-154 (526)
266 PF12017 Tnp_P_element: Transp 22.5 1.3E+02 0.0029 28.7 4.5 38 173-210 197-234 (236)
267 PRK14175 bifunctional 5,10-met 22.2 1.7E+02 0.0036 28.9 5.2 66 241-306 136-211 (286)
268 cd06167 LabA_like LabA_like pr 22.1 3E+02 0.0065 23.4 6.5 20 252-271 114-133 (149)
269 PRK15424 propionate catabolism 22.0 1E+03 0.022 25.8 11.5 70 173-272 95-165 (538)
270 PRK14183 bifunctional 5,10-met 21.6 7E+02 0.015 24.5 9.4 67 241-307 135-211 (281)
271 TIGR02370 pyl_corrinoid methyl 21.1 41 0.00089 31.0 0.7 79 129-209 106-188 (197)
272 PRK13670 hypothetical protein; 21.0 3.3E+02 0.0071 28.1 7.3 97 159-279 2-112 (388)
273 PF00875 DNA_photolyase: DNA p 20.8 5.1E+02 0.011 22.6 7.8 35 175-209 56-90 (165)
274 COG0647 NagD Predicted sugar p 20.8 2.7E+02 0.0058 27.2 6.3 34 253-286 199-233 (269)
275 PF05240 APOBEC_C: APOBEC-like 20.8 1E+02 0.0022 22.4 2.5 25 172-196 2-26 (55)
276 PRK10886 DnaA initiator-associ 20.8 2E+02 0.0043 26.6 5.2 28 171-198 122-149 (196)
277 PRK13111 trpA tryptophan synth 20.6 4.2E+02 0.009 25.6 7.6 27 248-274 186-212 (258)
278 cd00537 MTHFR Methylenetetrahy 20.6 1.1E+02 0.0024 29.6 3.6 39 159-197 60-99 (274)
279 PLN03064 alpha,alpha-trehalose 20.4 1.6E+02 0.0035 34.0 5.3 39 170-208 623-662 (934)
280 PRK13938 phosphoheptose isomer 20.3 1E+02 0.0022 28.5 3.2 29 170-198 125-153 (196)
281 cd04906 ACT_ThrD-I_1 First of 20.3 78 0.0017 24.7 2.1 35 162-196 42-77 (85)
282 PLN02151 trehalose-phosphatase 20.1 1E+02 0.0022 31.4 3.3 33 170-203 121-153 (354)
No 1
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-94 Score=727.53 Aligned_cols=440 Identities=74% Similarity=1.096 Sum_probs=420.7
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
||+||++|+|||||||.|+++|++..++++.+|+++|+++..|+++++.+|+|+||+|+++++.+|++++.+|++++|+|
T Consensus 324 mAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~P 403 (942)
T KOG0205|consen 324 MAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLP 403 (942)
T ss_pred hhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeecc
Confidence 78999999999999999999999988888999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
|||++||++.+|.+++|++++++||+|++|+++|..+.++++++++.+++|+++|+|.|+||++..|++..+..+.+|+|
T Consensus 404 FnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~ 483 (942)
T KOG0205|consen 404 FNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEF 483 (942)
T ss_pred CCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|++++.||||+++.++|++....|++|.|+|||....++++++++|+.+++||+..+.|.+.++.+...+.++++++++
T Consensus 484 ~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~ad 563 (942)
T KOG0205|consen 484 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKAD 563 (942)
T ss_pred ccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
.|+.++|+||+++|+.||+++|.|+|+|||+||+|+|+.||+||++.+++++|+.+||+|+++++++.|+.++..||.+|
T Consensus 564 gfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIf 643 (942)
T KOG0205|consen 564 GFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 643 (942)
T ss_pred CccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-------------------------------------------------------------------
Q 013069 321 QRMRNYMVRGIDG------------------------------------------------------------------- 333 (450)
Q Consensus 321 ~~i~~~~~~~~~~------------------------------------------------------------------- 333 (450)
+||++|.+|++..
T Consensus 644 qrmknytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgty 723 (942)
T KOG0205|consen 644 QRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTY 723 (942)
T ss_pred HHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhH
Confidence 9999998887721
Q ss_pred ---------------------------------HHHHHHHHHhh------------------------------------
Q 013069 334 ---------------------------------LSSTEFIQVLE------------------------------------ 344 (450)
Q Consensus 334 ---------------------------------~~~~i~l~~~~------------------------------------ 344 (450)
++.++|+++++
T Consensus 724 ma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliat 803 (942)
T KOG0205|consen 724 MAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIAT 803 (942)
T ss_pred HHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHH
Confidence 44455555554
Q ss_pred ----------------------------hcccccHHHHHHH---------------HHhccCcccccchhHHHHHHHHhh
Q 013069 345 ----------------------------LNFLFTLDTVIAI---------------LQTAFTSKKDFGKEERELLWAHAQ 381 (450)
Q Consensus 345 ----------------------------~~~~~pl~~~~~l---------------~~~~~~~~~~~~~~~~~~~~~~~~ 381 (450)
+.+++|++.+.+. .+++|+.+++||.+.++.+|+..|
T Consensus 804 liavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~~~q 883 (942)
T KOG0205|consen 804 LIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWALAQ 883 (942)
T ss_pred HHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHHHhh
Confidence 4577888888885 456788999999999999999999
Q ss_pred hhhhcCCCCCCccccccccccccchhHHHHHhhhhHHhhhhhhcccchhhhhhhccCCChhhhhccccC
Q 013069 382 RTLHGLQPPDTSMFSVRSSYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 450 (450)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (450)
|++||+++++ -+++|+++++++||+|++|+|++|+|+||+|+++|+||+|+++| |||||
T Consensus 884 rt~~~lq~~~---------~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 884 RTLHGLQPPE---------GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred hhhcccCCCc---------cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 9999999994 17999999999999999999999999999999999999999999 99997
No 2
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-70 Score=606.26 Aligned_cols=393 Identities=31% Similarity=0.446 Sum_probs=316.5
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCC---------hHHHHHHHHHhcccC--------CCChHHHHHHHhh
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD---------ADTVVLMAARASQVE--------NLDVIDAAIVGML 63 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~---------~~~il~~aa~~~~~~--------~~~pi~~ai~~~~ 63 (450)
||++|+||||||||||+|+|+|.++++.....+.+ ...++..++.|+... ..||.|.||+.++
T Consensus 345 LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a 424 (917)
T COG0474 345 LGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFA 424 (917)
T ss_pred ccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHH
Confidence 79999999999999999999999988752011122 112455555555222 3589999999988
Q ss_pred cCc------hhhhhcccEEEEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC-------ChhhHHHHHHHHHH
Q 013069 64 ADP------KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-------KSKIGRKVNAVINK 130 (450)
Q Consensus 64 ~~~------~~~~~~~~~l~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~-------~~~~~~~~~~~~~~ 130 (450)
.+. ...+..+++++.+||+|.+|||++++++.+|+++.++|||||.|+++|.. .++.++.+.+..++
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (917)
T COG0474 425 EKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKE 504 (917)
T ss_pred HhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHH
Confidence 643 23345567799999999999999999977777999999999999999873 45677889999999
Q ss_pred HHHhcchhhhhhceecCCCCc----CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 013069 131 FAERGLRSLAVAYQEVPEGSK----ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 206 (450)
Q Consensus 131 ~a~~Glr~l~vA~~~~~~~~~----~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l 206 (450)
|+++|+|++++||+.++..+. +..|+++.|+|+++++||||++++++|+.|+++||++||+||||..||.+||++|
T Consensus 505 la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~ 584 (917)
T COG0474 505 LASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC 584 (917)
T ss_pred HHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHc
Confidence 999999999999998876544 5789999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 207 GMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 207 gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
|+..+.....+++|.+.+...+. ++.+.+++..+|||++|+||.++|+.||+.|++|+|+|||+||+||||+|||||||
T Consensus 585 Gi~~~~~~~~vi~G~el~~l~~~-el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIam 663 (917)
T COG0474 585 GIEAEAESALVIDGAELDALSDE-ELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAM 663 (917)
T ss_pred CCCCCCCceeEeehHHhhhcCHH-HHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEe
Confidence 98765444446777766543333 66778888899999999999999999999999999999999999999999999999
Q ss_pred c-cchHHHhhccCEEecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhc--ccccHHHHHHH-HHhc
Q 013069 287 A-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFI-QVLELN--FLFTLDTVIAI-LQTA 361 (450)
Q Consensus 287 ~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l-~~~~~~--~~~pl~~~~~l-~~~~ 361 (450)
+ +|+++++++||++++++++..|..+|.+||++|+|+++++.|.+..+...++. .+..++ .++|+.+++++ .++.
T Consensus 664 g~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll 743 (917)
T COG0474 664 GGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLL 743 (917)
T ss_pred cccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHH
Confidence 8 69999999999999999999999999999999999999999998865553333 333333 34799999998 4445
Q ss_pred cCcccccchhHHHHHHHHhhhhhhcCCCCCCccccc
Q 013069 362 FTSKKDFGKEERELLWAHAQRTLHGLQPPDTSMFSV 397 (450)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (450)
+...+.+..+.....|....+. .+.|.+.+|+.
T Consensus 744 ~d~~pa~~L~~~~~~~~~m~~~---~~~p~~~i~~~ 776 (917)
T COG0474 744 TDSLPALALGVEDPESDVMKRP---PRGPEEGLFNR 776 (917)
T ss_pred HhhhhhheeecCCCcccccccC---CCCccccccch
Confidence 5555444433332233333332 44555556643
No 3
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=3.9e-64 Score=551.02 Aligned_cols=348 Identities=55% Similarity=0.858 Sum_probs=295.7
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
||++|+||||||||||+|+|+|.+++. ...+.+.++++.+++.++...+.||+|.|++.++.+....+..++.++.+|
T Consensus 283 lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~p 360 (755)
T TIGR01647 283 LAGMDILCSDKTGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVP 360 (755)
T ss_pred ccCCcEEEecCCCccccCceEEEEEEe--cCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEec
Confidence 689999999999999999999998753 222367888888888776555667999999998766544456788899999
Q ss_pred cCCCCceEEEEEEccC-CeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcE
Q 013069 81 FDPTGKRTALTYIDSE-GKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQ 159 (450)
Q Consensus 81 F~~~~kr~svi~~~~~-g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~ 159 (450)
|++.+|+|++++.+.+ |+.+.++||+|+.|+++|....+.++.+++.+++++.+|+|++++||++ .|++|+
T Consensus 361 f~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~ 432 (755)
T TIGR01647 361 FDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWH 432 (755)
T ss_pred cCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcE
Confidence 9999999999887653 7788899999999999998766777888899999999999999999973 257899
Q ss_pred EEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc
Q 013069 160 FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 160 ~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
|+|+++++||||++++++|++|+++|++|+|+|||++.+|.++|+++||..+.+....+......+.+.+.++++.++++
T Consensus 433 ~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 512 (755)
T TIGR01647 433 FLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDA 512 (755)
T ss_pred EEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999997543322222211111233344577888899
Q ss_pred cceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHH
Q 013069 240 DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAI 319 (450)
Q Consensus 240 ~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~ 319 (450)
++||+++|+||.++|+.||++|++|+|+|||+||+|||++|||||||+++++.|+++||+||++++|+.|+.+|++||++
T Consensus 513 ~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~ 592 (755)
T TIGR01647 513 DGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKI 592 (755)
T ss_pred CEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhhhcccccHHHHHHHH
Q 013069 320 FQRMRNYMVRGIDGLSSTEFI-QVLELNFLFTLDTVIAIL 358 (450)
Q Consensus 320 ~~~i~~~~~~~~~~~~~~i~l-~~~~~~~~~pl~~~~~l~ 358 (450)
|+||++|+.|.+..++..++. .++.++..+|++++++|+
T Consensus 593 ~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~~l~~~~il~ 632 (755)
T TIGR01647 593 FQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVI 632 (755)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhCcchhHHHHHH
Confidence 999999999999865554433 333333446788888873
No 4
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-64 Score=526.83 Aligned_cols=357 Identities=29% Similarity=0.447 Sum_probs=290.7
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccC-----------CC------------------ChH---HHHHHHHHhcc
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG-----------GV------------------DAD---TVVLMAARASQ 48 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~-----------~~------------------~~~---~il~~aa~~~~ 48 (450)
||.+++||+|||||||+|+|++.++++..... ++ +.+ +++..++.|..
T Consensus 329 LGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNd 408 (972)
T KOG0202|consen 329 LGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCND 408 (972)
T ss_pred ccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhh
Confidence 78999999999999999999999987621110 01 111 33444444421
Q ss_pred -----cC------CCChHHHHHHHhhcC-----ch---h-----------hhhcccEEEEeccCCCCceEEEEEEccCCe
Q 013069 49 -----VE------NLDVIDAAIVGMLAD-----PK---E-----------ARADIQEVHFLPFDPTGKRTALTYIDSEGK 98 (450)
Q Consensus 49 -----~~------~~~pi~~ai~~~~~~-----~~---~-----------~~~~~~~l~~~pF~~~~kr~svi~~~~~g~ 98 (450)
.. ...|.+.|+...+.. .. . ..+.++.+..+||++.+|+|++.+.+..|.
T Consensus 409 a~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~ 488 (972)
T KOG0202|consen 409 ATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQ 488 (972)
T ss_pred hhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCC
Confidence 11 235888888765431 11 0 122345568999999999999999976554
Q ss_pred --EEEEEcCCHHHHHhhhc------------CChhhHHHHHHHHHHHHHhcchhhhhhceecCCC-----------CcCC
Q 013069 99 --MHRVTKGSPEQILNLLH------------NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG-----------SKES 153 (450)
Q Consensus 99 --~~~~~KGa~~~i~~~~~------------~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~-----------~~~~ 153 (450)
+..|.|||+|.|+++|. .++..++.+.+...+|.++|+|+|++|++..+.. .+..
T Consensus 489 ~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~ 568 (972)
T KOG0202|consen 489 SGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRAT 568 (972)
T ss_pred ccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcccccccc
Confidence 78999999999999994 1345678888999999999999999999976631 2446
Q ss_pred CCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccCCchhhhhhcCC
Q 013069 154 SGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQDRDESIVALP 231 (450)
Q Consensus 154 ~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~l~~~~~~~~~~~~~ 231 (450)
.|.+|+|+|++++.||||++++++|+.|+++||+|+|+|||+..||++||+++|+..+.. ....++|.+.|. +...+
T Consensus 569 ~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~-ls~~~ 647 (972)
T KOG0202|consen 569 AESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDD-LSDEE 647 (972)
T ss_pred cccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhc-CCHHH
Confidence 789999999999999999999999999999999999999999999999999999976543 445667766653 44445
Q ss_pred hhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHH
Q 013069 232 VDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVII 310 (450)
Q Consensus 232 ~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~ 310 (450)
.++.+....+|+|++|.||.+||+.||++|.+|+|+|||+||+||||.|||||||| +|++.||+|||+||.++||+.|+
T Consensus 648 ~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIv 727 (972)
T KOG0202|consen 648 LDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIV 727 (972)
T ss_pred HHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHH
Confidence 66778888999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhc-ccccHHHHHHHH
Q 013069 311 TAVLISRAIFQRMRNYMVRGIDGLSSTEFI-QVLELN-FLFTLDTVIAIL 358 (450)
Q Consensus 311 ~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l-~~~~~~-~~~pl~~~~~l~ 358 (450)
.+|++||.+|.||++|+.|.+..+...+.+ .++..+ .-.||.++++|+
T Consensus 728 aAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLW 777 (972)
T KOG0202|consen 728 AAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILW 777 (972)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhhe
Confidence 999999999999999999999866555544 344444 558999999993
No 5
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=2.2e-63 Score=552.64 Aligned_cols=354 Identities=28% Similarity=0.453 Sum_probs=295.2
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhccc--CCCChHHHHHHHhhcCch--hhhhcccEE
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQV--ENLDVIDAAIVGMLADPK--EARADIQEV 76 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~--~~~~pi~~ai~~~~~~~~--~~~~~~~~l 76 (450)
||++|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++.. ...||+|.|++.++.... ..+..++.+
T Consensus 366 Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~ 442 (903)
T PRK15122 366 FGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKV 442 (903)
T ss_pred hcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceE
Confidence 689999999999999999999998642 2244556777777654332 234799999998875432 123467889
Q ss_pred EEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC----------ChhhHHHHHHHHHHHHHhcchhhhhhceec
Q 013069 77 HFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEV 146 (450)
Q Consensus 77 ~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~ 146 (450)
+.+||++.+|+|++++.+.+|+++.++||+|+.|+++|.. +++.++.+.+..++++.+|+|++++||+++
T Consensus 443 ~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~ 522 (903)
T PRK15122 443 DELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREI 522 (903)
T ss_pred EEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc
Confidence 9999999999999998877788899999999999999962 223355677888999999999999999988
Q ss_pred CCCCc-----CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCC
Q 013069 147 PEGSK-----ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQ 221 (450)
Q Consensus 147 ~~~~~-----~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~ 221 (450)
+.++. +..|++++|+|+++++||||++++++|++|+++||+|+|+|||++.+|.++|+++||.. ..++.|.
T Consensus 523 ~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~~vi~G~ 598 (903)
T PRK15122 523 PGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----GEPLLGT 598 (903)
T ss_pred CccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----CCccchH
Confidence 65432 23578999999999999999999999999999999999999999999999999999953 3456666
Q ss_pred chhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEe
Q 013069 222 DRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVL 301 (450)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl 301 (450)
+.+. +...++.+.+++.++|||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++|++.|+++||+||
T Consensus 599 el~~-~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVL 677 (903)
T PRK15122 599 EIEA-MDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKESADIIL 677 (903)
T ss_pred hhhh-CCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhcCEEE
Confidence 5542 334456778888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hhcccccHHHHHHHHHhcc
Q 013069 302 TEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQ-VL-ELNFLFTLDTVIAILQTAF 362 (450)
Q Consensus 302 ~~~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~-~~-~~~~~~pl~~~~~l~~~~~ 362 (450)
++++|+.|+.+|++||++|+||++|+.|.+..++..++.. ++ .+..++|+.++++|+...+
T Consensus 678 ldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli 740 (903)
T PRK15122 678 LEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLM 740 (903)
T ss_pred ecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence 9999999999999999999999999999997655443332 22 2335589999999844433
No 6
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=2.8e-63 Score=551.12 Aligned_cols=351 Identities=29% Similarity=0.470 Sum_probs=295.3
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccC--CCChHHHHHHHhhcCch--hhhhcccEE
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVE--NLDVIDAAIVGMLADPK--EARADIQEV 76 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~--~~~pi~~ai~~~~~~~~--~~~~~~~~l 76 (450)
||++|+||||||||||+|+|+|.+.. . ..+.+.++++.+++.++... ..||+|.|++.++.... .....|+.+
T Consensus 368 lg~v~vic~DKTGTLT~n~m~V~~~~-~--~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~ 444 (902)
T PRK10517 368 FGAMDILCTDKTGTLTQDKIVLENHT-D--ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKI 444 (902)
T ss_pred ccCCCEEEecCCCccccceEEEEEEe-c--CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceE
Confidence 68999999999999999999998753 1 23456677888877755432 35799999998875422 234568889
Q ss_pred EEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC----------ChhhHHHHHHHHHHHHHhcchhhhhhceec
Q 013069 77 HFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEV 146 (450)
Q Consensus 77 ~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~ 146 (450)
+.+||++.+|+|++++.+.++....++||+|+.|+++|.. +++..+.+.+..++++++|+|++++||+++
T Consensus 445 ~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~ 524 (902)
T PRK10517 445 DEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYL 524 (902)
T ss_pred EEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecC
Confidence 9999999999999998776777789999999999999962 123455677788999999999999999987
Q ss_pred CCCCcC---CCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCch
Q 013069 147 PEGSKE---SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDR 223 (450)
Q Consensus 147 ~~~~~~---~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~ 223 (450)
+..+.+ ..|++++|+|+++++||||++++++|++|+++|++|+|+|||++.+|.++|+++||.. ..++.|.+.
T Consensus 525 ~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~~v~~G~el 600 (902)
T PRK10517 525 PAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----GEVLIGSDI 600 (902)
T ss_pred CccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----cCceeHHHH
Confidence 643321 2367999999999999999999999999999999999999999999999999999952 345666555
Q ss_pred hhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecC
Q 013069 224 DESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303 (450)
Q Consensus 224 ~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~ 303 (450)
+ .+.+.++++.+++.++|+|++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++|+|.|+++||+||++
T Consensus 601 ~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLld 679 (902)
T PRK10517 601 E-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLE 679 (902)
T ss_pred H-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhCCEEEec
Confidence 4 334445777888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh-hcccccHHHHHHHHH
Q 013069 304 PGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LE-LNFLFTLDTVIAILQ 359 (450)
Q Consensus 304 ~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~-~~-~~~~~pl~~~~~l~~ 359 (450)
++|..|+.+|++||++|+||++|+.|.+..++..++..+ +. +..++|+.++++|+.
T Consensus 680 d~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~i 737 (902)
T PRK10517 680 KSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQ 737 (902)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 999999999999999999999999999987665554433 22 235579999999833
No 7
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-64 Score=522.05 Aligned_cols=436 Identities=22% Similarity=0.314 Sum_probs=332.1
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCC--------CChH--HHHHHH-HHhcc-------------cCCCChHH
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGG--------VDAD--TVVLMA-ARASQ-------------VENLDVID 56 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~--------~~~~--~il~~a-a~~~~-------------~~~~~pi~ 56 (450)
||..++||+|||||||+|.|+|.+.++....+. .++. +++..+ +..+. ....+|.+
T Consensus 432 MGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE 511 (1034)
T KOG0204|consen 432 MGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTE 511 (1034)
T ss_pred cCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHH
Confidence 789999999999999999999999887322211 2211 122111 11110 11236899
Q ss_pred HHHHHhhc----CchhhhhcccEEEEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC-----------ChhhH
Q 013069 57 AAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-----------KSKIG 121 (450)
Q Consensus 57 ~ai~~~~~----~~~~~~~~~~~l~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~-----------~~~~~ 121 (450)
+||+++.. +....|.....++++||||++|+|+++++.++|..+.++|||+|.++..|.. +++-.
T Consensus 512 ~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~ 591 (1034)
T KOG0204|consen 512 CALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDR 591 (1034)
T ss_pred HHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHH
Confidence 99998753 4455667778899999999999999999987776349999999999999962 34445
Q ss_pred HHHHHHHHHHHHhcchhhhhhceecCCC-------C-cCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcC
Q 013069 122 RKVNAVINKFAERGLRSLAVAYQEVPEG-------S-KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITG 193 (450)
Q Consensus 122 ~~~~~~~~~~a~~Glr~l~vA~~~~~~~-------~-~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTG 193 (450)
..+++.++.||++|+|++|+||++++.. + .+.++.+++++|+++++||.||+++++|+.|+.+|+.|.|+||
T Consensus 592 ~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTG 671 (1034)
T KOG0204|consen 592 KSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTG 671 (1034)
T ss_pred HHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeC
Confidence 6899999999999999999999984432 1 1345689999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCC
Q 013069 194 DQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVND 273 (450)
Q Consensus 194 D~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND 273 (450)
||..||++||.+|||.++.-+-..+.|.+.. .+...+.++++.+..++||.+|.+|+-+|+.|+.+|++|+.+|||.||
T Consensus 672 DNI~TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTND 750 (1034)
T KOG0204|consen 672 DNINTAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTND 750 (1034)
T ss_pred CcHHHHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCC
Confidence 9999999999999998876666777777765 445556778899999999999999999999999999999999999999
Q ss_pred hHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhc-cccc
Q 013069 274 APALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVL-ELN-FLFT 350 (450)
Q Consensus 274 ~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~~-~~~-~~~p 350 (450)
+|||++||||+||| .|++.||++||||+++++|++|+.++.|||.+|.||+||+.|.+..+..++...+. .+. .-.|
T Consensus 751 aPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsP 830 (1034)
T KOG0204|consen 751 APALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSP 830 (1034)
T ss_pred chhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCcc
Confidence 99999999999999 89999999999999999999999999999999999999999998765555555443 332 5589
Q ss_pred HHHHHHH-HHhccCcccccchhHHHHHHHHhhhhhhcCCCCCCccccccccccccchhHHHHHhhhhHHhhhhhhcccch
Q 013069 351 LDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPPDTSMFSVRSSYGELSWMAEEARRRAEIARLRELHTLKGH 429 (450)
Q Consensus 351 l~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (450)
|..+|+| .++.+-.+..+....+-+.-....|.+.|-..| +..+++++.+= -+...++--+-.|...
T Consensus 831 LtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~----LIt~tMwknil--------~qa~YQl~vl~iL~F~ 898 (1034)
T KOG0204|consen 831 LTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKP----LITRTMWKNIL--------GQAVYQLIVLFILNFA 898 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCc----chHHHHHHHHH--------HHHHHHHHHHHHHHhc
Confidence 9999998 222221111111111111111223444444444 44555555433 5566666666667666
Q ss_pred hhhhhhccCCChhhhhcccc
Q 013069 430 VESLIRLKGLDIDAIQQSYS 449 (450)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~ 449 (450)
-++...+.+.+-..-+++||
T Consensus 899 G~~if~~~~~~~~~~~~~nT 918 (1034)
T KOG0204|consen 899 GKSIFGLNGPLHSPPSVHNT 918 (1034)
T ss_pred chhhhccCCCCCCchhhhee
Confidence 66666556555433334444
No 8
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=2.8e-62 Score=542.91 Aligned_cols=352 Identities=26% Similarity=0.442 Sum_probs=293.4
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccC--CCChHHHHHHHhhcCc--hhhhhcccEE
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVE--NLDVIDAAIVGMLADP--KEARADIQEV 76 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~--~~~pi~~ai~~~~~~~--~~~~~~~~~l 76 (450)
||++|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++..+ ..||+|.|++.++... ...+..++.+
T Consensus 333 lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~ 409 (867)
T TIGR01524 333 FGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKV 409 (867)
T ss_pred ccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceE
Confidence 689999999999999999999998531 23455677888777654422 2479999999887542 1234567889
Q ss_pred EEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC----------ChhhHHHHHHHHHHHHHhcchhhhhhceec
Q 013069 77 HFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEV 146 (450)
Q Consensus 77 ~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~ 146 (450)
+.+||++.+|+|++++.+.++..+.++||+|+.|+++|.. +++.++.+++.+++++++|+|++++||+++
T Consensus 410 ~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~ 489 (867)
T TIGR01524 410 DEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTL 489 (867)
T ss_pred EEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecc
Confidence 9999999999999998766666789999999999999962 233456778888999999999999999988
Q ss_pred CCCCc---CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCch
Q 013069 147 PEGSK---ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDR 223 (450)
Q Consensus 147 ~~~~~---~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~ 223 (450)
+.++. +..|++|+|+|+++++||||++++++|++|+++|++|+|+|||+..+|.++|+++||.. ..++.|.+.
T Consensus 490 ~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~v~~g~~l 565 (867)
T TIGR01524 490 KVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----NDFLLGADI 565 (867)
T ss_pred CcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CCeeecHhh
Confidence 65432 12478899999999999999999999999999999999999999999999999999963 245555544
Q ss_pred hhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecC
Q 013069 224 DESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303 (450)
Q Consensus 224 ~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~ 303 (450)
+. +...++.+.+++.++|||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||++|++.|+++||+||++
T Consensus 566 ~~-~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aADiVLld 644 (867)
T TIGR01524 566 EE-LSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLE 644 (867)
T ss_pred hh-CCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhCCEEEec
Confidence 32 23345667788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhh-cccccHHHHHHHHHh
Q 013069 304 PGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LEL-NFLFTLDTVIAILQT 360 (450)
Q Consensus 304 ~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~-~~~-~~~~pl~~~~~l~~~ 360 (450)
++|+.|+.+|++||++|+||++|+.|.+..++..++..+ +.+ ..++|+.++++|+..
T Consensus 645 d~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~in 703 (867)
T TIGR01524 645 KSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQN 703 (867)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 999999999999999999999999999976555544332 222 355899999998433
No 9
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=2.2e-62 Score=550.52 Aligned_cols=357 Identities=27% Similarity=0.425 Sum_probs=288.1
Q ss_pred CccccEEEeCcccccccCceEEEeEeeec---c-----cCCC--------------------------------------
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEI---F-----AGGV-------------------------------------- 34 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~---~-----~~~~-------------------------------------- 34 (450)
||.+++||+|||||||+|+|+|.++++.. + ..++
T Consensus 356 LG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1053)
T TIGR01523 356 LGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKE 435 (1053)
T ss_pred ccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccc
Confidence 79999999999999999999999986531 0 0000
Q ss_pred -C---------hHHHHHHHHHhccc------------CCCChHHHHHHHhhcCch----------hh-------------
Q 013069 35 -D---------ADTVVLMAARASQV------------ENLDVIDAAIVGMLADPK----------EA------------- 69 (450)
Q Consensus 35 -~---------~~~il~~aa~~~~~------------~~~~pi~~ai~~~~~~~~----------~~------------- 69 (450)
+ ..+++..++.|... ...||.|.|++.++...+ ..
T Consensus 436 ~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (1053)
T TIGR01523 436 IDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQ 515 (1053)
T ss_pred cccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhcccccccccc
Confidence 0 01355555555321 124899999998764211 00
Q ss_pred ------hhcccEEEEeccCCCCceEEEEEEccCC-eEEEEEcCCHHHHHhhhcC------------ChhhHHHHHHHHHH
Q 013069 70 ------RADIQEVHFLPFDPTGKRTALTYIDSEG-KMHRVTKGSPEQILNLLHN------------KSKIGRKVNAVINK 130 (450)
Q Consensus 70 ------~~~~~~l~~~pF~~~~kr~svi~~~~~g-~~~~~~KGa~~~i~~~~~~------------~~~~~~~~~~~~~~ 130 (450)
+..|+.++.+||+|.+|||++++++.++ ++++|+|||||.|+++|.. +++.++.+.+.+++
T Consensus 516 ~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~ 595 (1053)
T TIGR01523 516 HNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMES 595 (1053)
T ss_pred ccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHH
Confidence 2347789999999999999999986544 4789999999999999962 12345678888999
Q ss_pred HHHhcchhhhhhceecCCCC------------cCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHH
Q 013069 131 FAERGLRSLAVAYQEVPEGS------------KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAI 198 (450)
Q Consensus 131 ~a~~Glr~l~vA~~~~~~~~------------~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~ 198 (450)
|+++|+|||++||+.+++++ .+..|++|+|+|+++++||||++++++|+.|+++||+|+|+|||++.|
T Consensus 596 ~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~t 675 (1053)
T TIGR01523 596 LAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPET 675 (1053)
T ss_pred HHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHH
Confidence 99999999999999887532 234578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCC--------CCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCC
Q 013069 199 AKETGRRLGMGTNMY--------PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNG 270 (450)
Q Consensus 199 a~~ia~~lgi~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG 270 (450)
|.++|+++||..... ...++.|.+.+. +.+.+++++++...+|||++|+||.++|+.+|+.|++|+|+|||
T Consensus 676 A~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~-l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDG 754 (1053)
T TIGR01523 676 AKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA-LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDG 754 (1053)
T ss_pred HHHHHHHcCCCCccccccccccccceeeehHHhhh-cCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCC
Confidence 999999999964311 234566655432 23334566777788999999999999999999999999999999
Q ss_pred CCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhc--
Q 013069 271 VNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVL-ELN-- 346 (450)
Q Consensus 271 ~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~~-~~~-- 346 (450)
+||+|||+.|||||||| +|++.|+++||+|+++++|+.|+.+|.+||++|+||++++.|.+..++..+...+. .++
T Consensus 755 vNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~ 834 (1053)
T TIGR01523 755 VNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRD 834 (1053)
T ss_pred cchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 99999999999999998 89999999999999999999999999999999999999999999876655554433 232
Q ss_pred ----ccccHHHHHHHH
Q 013069 347 ----FLFTLDTVIAIL 358 (450)
Q Consensus 347 ----~~~pl~~~~~l~ 358 (450)
..+|++++++|+
T Consensus 835 ~~g~~~~Pl~~~qiL~ 850 (1053)
T TIGR01523 835 ENGKSVFPLSPVEILW 850 (1053)
T ss_pred ccCCCcCchHHHHHHH
Confidence 147999999984
No 10
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1.5e-61 Score=542.55 Aligned_cols=354 Identities=25% Similarity=0.375 Sum_probs=288.9
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCC-------CC--hHHHHHHHHHh-ccc-----------CCCChHHHHH
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGG-------VD--ADTVVLMAARA-SQV-----------ENLDVIDAAI 59 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~-------~~--~~~il~~aa~~-~~~-----------~~~~pi~~ai 59 (450)
||++|+||||||||||+|+|+|.+++......+ .+ ..+++..++.+ +.. ...||+|.|+
T Consensus 373 lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~Al 452 (941)
T TIGR01517 373 MGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECAL 452 (941)
T ss_pred ccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHH
Confidence 789999999999999999999999765321000 01 12233333332 221 1247999999
Q ss_pred HHhhcC----chhhhhcccEEEEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCC----------hhhHHHHH
Q 013069 60 VGMLAD----PKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK----------SKIGRKVN 125 (450)
Q Consensus 60 ~~~~~~----~~~~~~~~~~l~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~----------~~~~~~~~ 125 (450)
+.++.. ....+..++.++.+||++.+|+|++++...+++++.++|||||.|+++|... .+.++.+.
T Consensus 453 l~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~ 532 (941)
T TIGR01517 453 LGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCA 532 (941)
T ss_pred HHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHH
Confidence 988752 2223446777889999999999999998766778999999999999999631 01346678
Q ss_pred HHHHHHHHhcchhhhhhceecCCCCc---CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHH
Q 013069 126 AVINKFAERGLRSLAVAYQEVPEGSK---ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKET 202 (450)
Q Consensus 126 ~~~~~~a~~Glr~l~vA~~~~~~~~~---~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~i 202 (450)
+.+++|+++|+|++++||++++.++. +..|++|+|+|+++++||+|++++++|++|+++|++++|+|||++.+|.++
T Consensus 533 ~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~i 612 (941)
T TIGR01517 533 DVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAI 612 (941)
T ss_pred HHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHH
Confidence 88999999999999999999865443 234789999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe
Q 013069 203 GRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI 282 (450)
Q Consensus 203 a~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv 282 (450)
|+++||..+. ..++.|.+.+. +...++++.+.+..+|||++|+||.++|+.||++|++|+|+|||+||+|||++|||
T Consensus 613 A~~~GI~~~~--~~vi~G~~~~~-l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdV 689 (941)
T TIGR01517 613 ARNCGILTFG--GLAMEGKEFRR-LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADV 689 (941)
T ss_pred HHHcCCCCCC--ceEeeHHHhhh-CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCc
Confidence 9999997432 34566655432 33345667788889999999999999999999999999999999999999999999
Q ss_pred eEEec-cchHHHhhccCEEecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hh-cccccHHHHHHH
Q 013069 283 GIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVL-EL-NFLFTLDTVIAI 357 (450)
Q Consensus 283 GIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~~-~~-~~~~pl~~~~~l 357 (450)
||||| +|++.|+++||+|+++++|+.|+.+|.+||++|+||++++.|.+..++..+.+.+. .+ ....|+++++++
T Consensus 690 GIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil 767 (941)
T TIGR01517 690 GFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLL 767 (941)
T ss_pred ceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 99999 89999999999999999999999999999999999999999999877766555443 22 356799999998
No 11
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.2e-60 Score=537.07 Aligned_cols=356 Identities=25% Similarity=0.376 Sum_probs=287.3
Q ss_pred CccccEEEeCcccccccCceEEEeEeeeccc---CC--------CC-----hHHHHHHHHHhccc---------------
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFA---GG--------VD-----ADTVVLMAARASQV--------------- 49 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~---~~--------~~-----~~~il~~aa~~~~~--------------- 49 (450)
||++++||||||||||+|+|+|.++++.... .+ .+ .+.++..++.|+..
T Consensus 341 lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~ 420 (997)
T TIGR01106 341 LGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRA 420 (997)
T ss_pred hcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccc
Confidence 6899999999999999999999998752110 00 11 12455666666421
Q ss_pred CCCChHHHHHHHhhcC----chhhhhcccEEEEeccCCCCceEEEEEEc--c-CCeEEEEEcCCHHHHHhhhcC------
Q 013069 50 ENLDVIDAAIVGMLAD----PKEARADIQEVHFLPFDPTGKRTALTYID--S-EGKMHRVTKGSPEQILNLLHN------ 116 (450)
Q Consensus 50 ~~~~pi~~ai~~~~~~----~~~~~~~~~~l~~~pF~~~~kr~svi~~~--~-~g~~~~~~KGa~~~i~~~~~~------ 116 (450)
...||.|.|++.++.. ....+..++.++.+||+|.+|||++++.. . ++++++|+|||||.|+++|..
T Consensus 421 ~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~ 500 (997)
T TIGR01106 421 VAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGK 500 (997)
T ss_pred cCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCC
Confidence 1247999999988642 23345678899999999999999988763 2 246789999999999999952
Q ss_pred ----ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcC-----------CCCCCcEEEEeccCCCCCCcchHHHHHHH
Q 013069 117 ----KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKE-----------SSGSPWQFIGLIPLFDPPIHDSAETIRRA 181 (450)
Q Consensus 117 ----~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~-----------~~e~~~~~lG~i~l~D~lr~~~~~~I~~l 181 (450)
+++.++.+++.+++|+++|+|++++||+.+++++.+ ..|++|+|+|+++++||||++++++|++|
T Consensus 501 ~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l 580 (997)
T TIGR01106 501 EQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKC 580 (997)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHH
Confidence 234566788899999999999999999988653211 22789999999999999999999999999
Q ss_pred HhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------------CccccCCchhhhhhcCChhHHhhhc
Q 013069 182 LSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 182 ~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~----------------------~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
+++|++|+|+|||+..+|.++|+++|+..+... ..++.|.+.+. +.+.++++.++++
T Consensus 581 ~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~el~~~~~~~ 659 (997)
T TIGR01106 581 RSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSEQLDEILKYH 659 (997)
T ss_pred HHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHHHHHHHHHhc
Confidence 999999999999999999999999999643210 13455544432 2222455666665
Q ss_pred c--ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 240 D--GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 240 ~--v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
. +|||++|+||.+||+.+|+.|++|+|+|||+||+|||++|||||||| .|++.++++||+|+++++|+.|+.+|.+|
T Consensus 660 ~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~G 739 (997)
T TIGR01106 660 TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEG 739 (997)
T ss_pred CCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHH
Confidence 4 99999999999999999999999999999999999999999999999 68999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-hc-ccccHHHHHHH
Q 013069 317 RAIFQRMRNYMVRGIDGLSSTEFIQVLE-LN-FLFTLDTVIAI 357 (450)
Q Consensus 317 R~~~~~i~~~~~~~~~~~~~~i~l~~~~-~~-~~~pl~~~~~l 357 (450)
|++|.|+++++.|.+..++..++..+.. ++ .+.|++++++|
T Consensus 740 R~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL 782 (997)
T TIGR01106 740 RLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITIL 782 (997)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHH
Confidence 9999999999999998766655554433 22 55789999998
No 12
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=5.4e-59 Score=520.20 Aligned_cols=355 Identities=29% Similarity=0.405 Sum_probs=284.9
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecc-----------cCCCC-------------------hHHHHHHHHHhcccC
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIF-----------AGGVD-------------------ADTVVLMAARASQVE 50 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~-----------~~~~~-------------------~~~il~~aa~~~~~~ 50 (450)
||++|+||||||||||+|+|+|.+++.... ..+++ .+.++..++.|....
T Consensus 286 lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~ 365 (917)
T TIGR01116 286 LGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSS 365 (917)
T ss_pred ccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCe
Confidence 689999999999999999999999764210 00000 123445555554321
Q ss_pred ------------CCChHHHHHHHhhcCch--------------------hhhhcccEEEEeccCCCCceEEEEEEccCCe
Q 013069 51 ------------NLDVIDAAIVGMLADPK--------------------EARADIQEVHFLPFDPTGKRTALTYIDSEGK 98 (450)
Q Consensus 51 ------------~~~pi~~ai~~~~~~~~--------------------~~~~~~~~l~~~pF~~~~kr~svi~~~~~g~ 98 (450)
..||.|.|++.++.+.+ ..+..|+.++.+||+|.+|||++++++ +++
T Consensus 366 ~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~ 444 (917)
T TIGR01116 366 LDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STG 444 (917)
T ss_pred eeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCc
Confidence 24899999998754311 123457789999999999999999875 467
Q ss_pred EEEEEcCCHHHHHhhhcC-----------ChhhHHHHHHHHHHHHH-hcchhhhhhceecCCCC----------cCCCCC
Q 013069 99 MHRVTKGSPEQILNLLHN-----------KSKIGRKVNAVINKFAE-RGLRSLAVAYQEVPEGS----------KESSGS 156 (450)
Q Consensus 99 ~~~~~KGa~~~i~~~~~~-----------~~~~~~~~~~~~~~~a~-~Glr~l~vA~~~~~~~~----------~~~~e~ 156 (450)
+++|+|||||.|+++|.. +++..+.+.+.+++|++ +|+|++++||+.+++++ .+..|+
T Consensus 445 ~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~ 524 (917)
T TIGR01116 445 NKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIES 524 (917)
T ss_pred EEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcC
Confidence 889999999999999962 12345678888999999 99999999999986432 234588
Q ss_pred CcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--CccccCCchhhhhhcCChhH
Q 013069 157 PWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDE 234 (450)
Q Consensus 157 ~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~--~~~l~~~~~~~~~~~~~~~~ 234 (450)
+|+|+|+++++||||++++++|++|+++|++++|+|||+..+|.++|+++|+..+... ...+.|.+.+. +...+...
T Consensus 525 ~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~-~~~~~~~~ 603 (917)
T TIGR01116 525 DLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE-MGPAKQRA 603 (917)
T ss_pred CcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh-CCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999753221 12344433221 22223445
Q ss_pred HhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 235 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 235 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.+.+..+|||++|+||.++|+.+|+.|++|+|+|||.||+|||+.|||||+|+++++.++++||+++.+++|+.|+.++.
T Consensus 604 ~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~ 683 (917)
T TIGR01116 604 ACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVE 683 (917)
T ss_pred hhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHH
Confidence 56667799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hc-ccccHHHHHHH
Q 013069 315 ISRAIFQRMRNYMVRGIDGLSSTEFIQVLE-LN-FLFTLDTVIAI 357 (450)
Q Consensus 315 ~~R~~~~~i~~~~~~~~~~~~~~i~l~~~~-~~-~~~pl~~~~~l 357 (450)
+||++|+|+++++.|.+..++..++..+.. ++ ...|+++++++
T Consensus 684 ~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll 728 (917)
T TIGR01116 684 EGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLL 728 (917)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHH
Confidence 999999999999999998665554444332 33 44799999987
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=2.9e-59 Score=528.76 Aligned_cols=354 Identities=23% Similarity=0.256 Sum_probs=275.6
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCC----------CChHHHHHHHHHhccc------CCCChHHHHHHHhhc
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGG----------VDADTVVLMAARASQV------ENLDVIDAAIVGMLA 64 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~----------~~~~~il~~aa~~~~~------~~~~pi~~ai~~~~~ 64 (450)
+|++|++|||||||||+|+|+|.+++....... .....++...+.|... ...||+|.|++.+.+
T Consensus 445 lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~ 524 (1054)
T TIGR01657 445 AGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATG 524 (1054)
T ss_pred cceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCC
Confidence 689999999999999999999998754211000 0112233333333321 125899999999764
Q ss_pred Cchhh-------------------hhcccEEEEeccCCCCceEEEEEEcc-CCeEEEEEcCCHHHHHhhhcCChhhHHHH
Q 013069 65 DPKEA-------------------RADIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKSKIGRKV 124 (450)
Q Consensus 65 ~~~~~-------------------~~~~~~l~~~pF~~~~kr~svi~~~~-~g~~~~~~KGa~~~i~~~~~~~~~~~~~~ 124 (450)
..... ...+++++.+||+|.+|||+++++.. +++++.++|||||.|+++|.. +..++.+
T Consensus 525 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~ 603 (1054)
T TIGR01657 525 WTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDY 603 (1054)
T ss_pred CEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhH
Confidence 21000 14578899999999999999999864 356789999999999999974 3467888
Q ss_pred HHHHHHHHHhcchhhhhhceecCCC--------CcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcH
Q 013069 125 NAVINKFAERGLRSLAVAYQEVPEG--------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQL 196 (450)
Q Consensus 125 ~~~~~~~a~~Glr~l~vA~~~~~~~--------~~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~ 196 (450)
++.+++|+++|+||+++||+++++. +++..|++|+|+|+++++||+|++++++|+.|+++|++++|+|||++
T Consensus 604 ~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~ 683 (1054)
T TIGR01657 604 QEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNP 683 (1054)
T ss_pred HHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCH
Confidence 9999999999999999999998743 23456899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCC---------------------------------------------------CccccCCchhh
Q 013069 197 AIAKETGRRLGMGTNMYP---------------------------------------------------SSALSGQDRDE 225 (450)
Q Consensus 197 ~~a~~ia~~lgi~~~~~~---------------------------------------------------~~~l~~~~~~~ 225 (450)
.||.++|+++||..+... ..++.|...+.
T Consensus 684 ~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~ 763 (1054)
T TIGR01657 684 LTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAV 763 (1054)
T ss_pred HHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHH
Confidence 999999999999643210 01112222111
Q ss_pred h--hhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecC
Q 013069 226 S--IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303 (450)
Q Consensus 226 ~--~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~ 303 (450)
. .....+.+++.++.+|||++|+||.++|+.||+.|++|+|+|||+||+||||+|||||||+++ + |..+||+++.+
T Consensus 764 l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-d-as~AA~f~l~~ 841 (1054)
T TIGR01657 764 LQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-E-ASVAAPFTSKL 841 (1054)
T ss_pred HHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-c-ceeecccccCC
Confidence 1 111235567788899999999999999999999999999999999999999999999999865 3 45899999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Q 013069 304 PGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAI 357 (450)
Q Consensus 304 ~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~pl~~~~~l 357 (450)
+++++|+.+|++||+++.++++.+.|.+.+....++......+...|+..++++
T Consensus 842 ~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~Q~l 895 (1054)
T TIGR01657 842 ASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLIGSNLGDGQFL 895 (1054)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcCccHHHH
Confidence 999999999999999999999888777665444433322222344788888876
No 14
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.1e-57 Score=508.31 Aligned_cols=349 Identities=29% Similarity=0.434 Sum_probs=285.4
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecc-c---C--CC-------------------ChHHHHHHHHHhcccC-----
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIF-A---G--GV-------------------DADTVVLMAARASQVE----- 50 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~-~---~--~~-------------------~~~~il~~aa~~~~~~----- 50 (450)
||++|+||||||||||+|+|+|.+++.... . . +. ...+++..++.|....
T Consensus 321 Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 400 (884)
T TIGR01522 321 LGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEA 400 (884)
T ss_pred ccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCC
Confidence 789999999999999999999999764210 0 0 00 1134555555554321
Q ss_pred ---CCChHHHHHHHhhcCc--hhhhhcccEEEEeccCCCCceEEEEEEc-cCCeEEEEEcCCHHHHHhhhcC--------
Q 013069 51 ---NLDVIDAAIVGMLADP--KEARADIQEVHFLPFDPTGKRTALTYID-SEGKMHRVTKGSPEQILNLLHN-------- 116 (450)
Q Consensus 51 ---~~~pi~~ai~~~~~~~--~~~~~~~~~l~~~pF~~~~kr~svi~~~-~~g~~~~~~KGa~~~i~~~~~~-------- 116 (450)
..||+|.|++.++... ...+..++.++.+||++.+|||++++.. .+++++.++||+||.|+..|..
T Consensus 401 ~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~ 480 (884)
T TIGR01522 401 DTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKT 480 (884)
T ss_pred CCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCe
Confidence 1369999999887532 2233468889999999999999998875 3577899999999999999952
Q ss_pred ---ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcC
Q 013069 117 ---KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITG 193 (450)
Q Consensus 117 ---~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTG 193 (450)
+++.++.+.+.+++|+++|+|++++||+++ +.+|+|+|+++++||+|++++++|+.|+++|++++|+||
T Consensus 481 ~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTG 552 (884)
T TIGR01522 481 LTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITG 552 (884)
T ss_pred eeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECC
Confidence 123456678888999999999999999975 357999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCC
Q 013069 194 DQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVND 273 (450)
Q Consensus 194 D~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND 273 (450)
|+..+|.++|+++||.... ..++.|.+.+ .+...++++.+.+..+|||++|+||..+|+.+|+.|+.|+|+|||+||
T Consensus 553 D~~~tA~~ia~~~Gi~~~~--~~~v~g~~l~-~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND 629 (884)
T TIGR01522 553 DSQETAVSIARRLGMPSKT--SQSVSGEKLD-AMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVND 629 (884)
T ss_pred CCHHHHHHHHHHcCCCCCC--CceeEhHHhH-hCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCccc
Confidence 9999999999999997432 2344554443 233345667788889999999999999999999999999999999999
Q ss_pred hHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhc-cccc
Q 013069 274 APALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LELN-FLFT 350 (450)
Q Consensus 274 ~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~-~~~~-~~~p 350 (450)
+|||++|||||+|| ++++.++++||+++++++|+.|+.++++||++|+||++++.|.+..++..+.+.+ +.++ ...|
T Consensus 630 ~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~p 709 (884)
T TIGR01522 630 APALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNP 709 (884)
T ss_pred HHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCc
Confidence 99999999999998 7999999999999999999999999999999999999999999986655554432 3333 5579
Q ss_pred HHHHHHHHHh
Q 013069 351 LDTVIAILQT 360 (450)
Q Consensus 351 l~~~~~l~~~ 360 (450)
++++++|+..
T Consensus 710 l~~~qiL~in 719 (884)
T TIGR01522 710 LNAMQILWIN 719 (884)
T ss_pred hhHHHHHHHH
Confidence 9999998433
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2.1e-57 Score=514.67 Aligned_cols=338 Identities=21% Similarity=0.301 Sum_probs=268.1
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCC---------------------------------C------------
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGV---------------------------------D------------ 35 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~---------------------------------~------------ 35 (450)
||++++||+|||||||+|+|++.++++....++. +
T Consensus 356 LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1057)
T TIGR01652 356 LGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKP 435 (1057)
T ss_pred hcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCc
Confidence 7999999999999999999999999864211110 0
Q ss_pred ----hHHHHHHHHHhccc-------C-------CCChHHHHHHHhhcCch------------------hhhhcccEEEEe
Q 013069 36 ----ADTVVLMAARASQV-------E-------NLDVIDAAIVGMLADPK------------------EARADIQEVHFL 79 (450)
Q Consensus 36 ----~~~il~~aa~~~~~-------~-------~~~pi~~ai~~~~~~~~------------------~~~~~~~~l~~~ 79 (450)
-.+++..++.|... . ..+|.|.|++.++...+ .....|++++.+
T Consensus 436 ~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~ 515 (1057)
T TIGR01652 436 NAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVL 515 (1057)
T ss_pred hhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEec
Confidence 02334444444321 1 24799999998764321 012468889999
Q ss_pred ccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC-ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCc-------
Q 013069 80 PFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK------- 151 (450)
Q Consensus 80 pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~-~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~------- 151 (450)
||++.+|||++++++.+|++++++||||+.|+++|.. .++..+.+.+.+++|+.+|+|++++||+.++++++
T Consensus 516 pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~ 595 (1057)
T TIGR01652 516 EFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEY 595 (1057)
T ss_pred ccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHH
Confidence 9999999999999988888899999999999999974 34567788899999999999999999999986531
Q ss_pred ------------------CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC
Q 013069 152 ------------------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY 213 (450)
Q Consensus 152 ------------------~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~ 213 (450)
+..|++++|+|+++++||||++++++|+.|+++||+|||+|||+.+||.++|++||+.....
T Consensus 596 ~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~ 675 (1057)
T TIGR01652 596 NEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNM 675 (1057)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC
Confidence 34589999999999999999999999999999999999999999999999999999976432
Q ss_pred CC---------------------------------------ccccCCchhhhhhcC---ChhHHhhhcc--ceeecChhh
Q 013069 214 PS---------------------------------------SALSGQDRDESIVAL---PVDELIEKAD--GFAGVFPEH 249 (450)
Q Consensus 214 ~~---------------------------------------~~l~~~~~~~~~~~~---~~~~~~~~~~--v~a~~~P~~ 249 (450)
.. .++.|...+..++.. .+.+++..+. +|||++|+|
T Consensus 676 ~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~q 755 (1057)
T TIGR01652 676 EQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQ 755 (1057)
T ss_pred eEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHH
Confidence 11 123333332222211 1233455555 999999999
Q ss_pred HHHHHHHHhhc-CCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHH-HHHHHHHHHHHHH
Q 013069 250 KYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAV-LISRAIFQRMRNY 326 (450)
Q Consensus 250 K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I-~~~R~~~~~i~~~ 326 (450)
|+++|+.+|+. |++|+|+|||+||+|||++|||||++. ....+|+.+||+++.+ |+.+..++ .+||++|+|++++
T Consensus 756 K~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~ 833 (1057)
T TIGR01652 756 KADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKM 833 (1057)
T ss_pred HHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHH
Confidence 99999999998 999999999999999999999999985 3444688999999975 99999988 7899999999999
Q ss_pred HHHHHHHHHHHHHH
Q 013069 327 MVRGIDGLSSTEFI 340 (450)
Q Consensus 327 ~~~~~~~~~~~i~l 340 (450)
+.|.+...+..++.
T Consensus 834 i~~~~~kn~~~~~~ 847 (1057)
T TIGR01652 834 ILYFFYKNLIFAII 847 (1057)
T ss_pred HHHHHHHHHHHHHH
Confidence 99988754433333
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.1e-55 Score=498.12 Aligned_cols=330 Identities=21% Similarity=0.264 Sum_probs=262.2
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCC-----------------------------------------C-h--
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGV-----------------------------------------D-A-- 36 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~-----------------------------------------~-~-- 36 (450)
||+|++||+|||||||+|+|++.+|.+....+|. + +
T Consensus 450 LGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (1178)
T PLN03190 450 LGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEA 529 (1178)
T ss_pred hccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhh
Confidence 7999999999999999999999999873211110 0 0
Q ss_pred ---HHHHHHHHHhccc------------------CCCChHHHHHHHhhcCch----------------hhhhcccEEEEe
Q 013069 37 ---DTVVLMAARASQV------------------ENLDVIDAAIVGMLADPK----------------EARADIQEVHFL 79 (450)
Q Consensus 37 ---~~il~~aa~~~~~------------------~~~~pi~~ai~~~~~~~~----------------~~~~~~~~l~~~ 79 (450)
.+++...+.|... ...+|.|.|++.++...+ ..+..|++++.+
T Consensus 530 ~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~ 609 (1178)
T PLN03190 530 KHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLH 609 (1178)
T ss_pred HHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEe
Confidence 1234444444321 112699999998875422 235678999999
Q ss_pred ccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC--ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCc------
Q 013069 80 PFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN--KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK------ 151 (450)
Q Consensus 80 pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~--~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~------ 151 (450)
||+|.+|||++++++++|++++|+||||+.|+++|.. +.+..+.+.+.+++|+++|+|||++||+.++++++
T Consensus 610 pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~ 689 (1178)
T PLN03190 610 EFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFS 689 (1178)
T ss_pred cccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHH
Confidence 9999999999999988888999999999999999964 24567788899999999999999999999976432
Q ss_pred -------------------CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC
Q 013069 152 -------------------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM 212 (450)
Q Consensus 152 -------------------~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~ 212 (450)
+..|++|+|+|+++++||||++++++|+.|+++|++|||+|||+.++|.+||+.|||.++.
T Consensus 690 ~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~ 769 (1178)
T PLN03190 690 FEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNK 769 (1178)
T ss_pred HHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCC
Confidence 2458999999999999999999999999999999999999999999999999999997543
Q ss_pred CCCc-----------------------------------------------cccCCchhhhhh---cCChhHHhhhcc--
Q 013069 213 YPSS-----------------------------------------------ALSGQDRDESIV---ALPVDELIEKAD-- 240 (450)
Q Consensus 213 ~~~~-----------------------------------------------~l~~~~~~~~~~---~~~~~~~~~~~~-- 240 (450)
.... ++.|...+..+. ...+.+++.++.
T Consensus 770 ~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~V 849 (1178)
T PLN03190 770 MTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVV 849 (1178)
T ss_pred CeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEE
Confidence 2111 111211111111 012334555666
Q ss_pred ceeecChhhHHHHHHHHhhc-CCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHH-HHH
Q 013069 241 GFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVL-ISR 317 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~-~~R 317 (450)
+|||++|.||+++|+.+|+. +++|+|||||+||++||++|||||++. ....+|..+||+.+.+ |..+..++. +||
T Consensus 850 I~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr 927 (1178)
T PLN03190 850 LCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGH 927 (1178)
T ss_pred EEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhh--hHHHHHHHHHhCH
Confidence 69999999999999999987 589999999999999999999999985 4556888899999977 777777777 899
Q ss_pred HHHHHHHHHHHHHHH
Q 013069 318 AIFQRMRNYMVRGID 332 (450)
Q Consensus 318 ~~~~~i~~~~~~~~~ 332 (450)
+.|.|+.+.+.|.+.
T Consensus 928 ~~y~R~s~~i~y~fY 942 (1178)
T PLN03190 928 WNYQRMGYMILYNFY 942 (1178)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999988877663
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3.8e-55 Score=467.76 Aligned_cols=280 Identities=24% Similarity=0.365 Sum_probs=239.9
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
||.+|+||||||||||+|++.+.++. . ..+.+.++++..++.++..++ ||+++|++.++...+... .....++.|
T Consensus 295 lg~v~vI~~DKTGTLT~Gn~~~~~~~-~--~~~~~~~~ll~~a~~~~~~s~-~P~~~AIv~~a~~~~~~~-~~~~~~~~p 369 (673)
T PRK14010 295 CGDVNVLILDKTGTITYGNRMADAFI-P--VKSSSFERLVKAAYESSIADD-TPEGRSIVKLAYKQHIDL-PQEVGEYIP 369 (673)
T ss_pred hhCCCEEEEeCCCcCCCCCeEEEEEE-e--CCCccHHHHHHHHHHhcCCCC-ChHHHHHHHHHHHcCCCc-hhhhcceec
Confidence 68999999999999999887776642 1 235567778888888876655 599999998765321110 111245689
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCC-hhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQ 159 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~-~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~ 159 (450)
|++.+|+|++.+ +|+ .+.||+++.+++.|... ...+..+++..++++++|+|+++++.+ ++
T Consensus 370 F~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~-------------~~ 431 (673)
T PRK14010 370 FTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLED-------------NE 431 (673)
T ss_pred cccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEEC-------------CE
Confidence 999999999864 343 46699999999999642 223345667778899999999988643 49
Q ss_pred EEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc
Q 013069 160 FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 160 ~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
++|++++.||+|++++++|++||++|++++|+||||+.+|.++|+++||.
T Consensus 432 ~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~------------------------------ 481 (673)
T PRK14010 432 ILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD------------------------------ 481 (673)
T ss_pred EEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc------------------------------
Confidence 99999999999999999999999999999999999999999999999996
Q ss_pred cceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHH
Q 013069 240 DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAI 319 (450)
Q Consensus 240 ~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~ 319 (450)
++|++++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||++|++.|+++||+|+++++|+.|++++++||++
T Consensus 482 ~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i 561 (673)
T PRK14010 482 RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQL 561 (673)
T ss_pred eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 013069 320 FQRMRNYMVRGIDG 333 (450)
Q Consensus 320 ~~~i~~~~~~~~~~ 333 (450)
|.|+++++.|.+.+
T Consensus 562 ~~n~~~~~~f~~~~ 575 (673)
T PRK14010 562 LMTRGSLTTFSIAN 575 (673)
T ss_pred HHHHHHHHheeeec
Confidence 99999999998865
No 18
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=6.5e-54 Score=458.70 Aligned_cols=279 Identities=26% Similarity=0.382 Sum_probs=240.6
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCc-h--hhhhcccEEE
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADP-K--EARADIQEVH 77 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~-~--~~~~~~~~l~ 77 (450)
||++|+||||||||||+|+|.+.+++. ..+.+.++++..++.++..++| |+++||+.++... + .....++..+
T Consensus 295 lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s~h-P~~~AIv~~a~~~~~~~~~~~~~~~~~ 370 (679)
T PRK01122 295 AGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLADET-PEGRSIVVLAKQRFNLRERDLQSLHAT 370 (679)
T ss_pred hcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCCCC-chHHHHHHHHHhhcCCCchhhccccce
Confidence 689999999999999999999988642 2467788899999888887765 9999999887531 1 1111245678
Q ss_pred EeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC-ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCC
Q 013069 78 FLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGS 156 (450)
Q Consensus 78 ~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~-~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~ 156 (450)
++||++.++++++.+ +| ..+.||+++.+++.|.. ....++.+++.+++++++|+|++++|++.
T Consensus 371 ~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~~~----------- 434 (679)
T PRK01122 371 FVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAEDN----------- 434 (679)
T ss_pred eEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEECC-----------
Confidence 899999988887753 34 57899999999999953 23345677888899999999999999754
Q ss_pred CcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHh
Q 013069 157 PWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELI 236 (450)
Q Consensus 157 ~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (450)
+++|+++++||+|++++++|++||++|++++|+|||++.+|.++|+++||+
T Consensus 435 --~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId--------------------------- 485 (679)
T PRK01122 435 --RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--------------------------- 485 (679)
T ss_pred --eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc---------------------------
Confidence 999999999999999999999999999999999999999999999999995
Q ss_pred hhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 237 EKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 237 ~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
++|++++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||++|++.|+++||+|+++++|+.|++++++|
T Consensus 486 ---~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~~G 562 (679)
T PRK01122 486 ---DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIG 562 (679)
T ss_pred ---EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 013069 317 RAIFQRMRNYMVRGI 331 (450)
Q Consensus 317 R~~~~~i~~~~~~~~ 331 (450)
|++.-.--....|++
T Consensus 563 R~~~~tr~~~~~f~~ 577 (679)
T PRK01122 563 KQLLMTRGALTTFSI 577 (679)
T ss_pred HHHHhhhHhhhhhhH
Confidence 997633333344444
No 19
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-53 Score=440.49 Aligned_cols=356 Identities=26% Similarity=0.391 Sum_probs=287.9
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCC----------------ChHHHHHHHHHhcc---------------c
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGV----------------DADTVVLMAARASQ---------------V 49 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~----------------~~~~il~~aa~~~~---------------~ 49 (450)
||..++||+|||||||+|+|+|...|.+...... .-.++++.+..|.+ .
T Consensus 363 lGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~ 442 (1019)
T KOG0203|consen 363 LGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRD 442 (1019)
T ss_pred cccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeee
Confidence 5778999999999999999999987753211101 11245555555543 2
Q ss_pred CCCChHHHHHHHhhc----CchhhhhcccEEEEeccCCCCceEEEEEEccC---CeEEEEEcCCHHHHHhhhc-------
Q 013069 50 ENLDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDSE---GKMHRVTKGSPEQILNLLH------- 115 (450)
Q Consensus 50 ~~~~pi~~ai~~~~~----~~~~~~~~~~~l~~~pF~~~~kr~svi~~~~~---g~~~~~~KGa~~~i~~~~~------- 115 (450)
.+.|+.+.|++++.. +..+.|..++.+...||||++|..-.+....+ .+..+++||+||.++++|+
T Consensus 443 v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~ 522 (1019)
T KOG0203|consen 443 VAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGE 522 (1019)
T ss_pred ccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCC
Confidence 345788999998753 34566888899999999999999887776533 5778999999999999997
Q ss_pred ---CChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCc-----------CCCCCCcEEEEeccCCCCCCcchHHHHHHH
Q 013069 116 ---NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-----------ESSGSPWQFIGLIPLFDPPIHDSAETIRRA 181 (450)
Q Consensus 116 ---~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~-----------~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l 181 (450)
.++...+.++....++...|.|+++++++.++++++ +.+-.+|.|+|++++-||||..+++++..|
T Consensus 523 e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~C 602 (1019)
T KOG0203|consen 523 EKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKC 602 (1019)
T ss_pred CCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhh
Confidence 245667888889999999999999999999886542 234578999999999999999999999999
Q ss_pred HhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC------------CC----------ccccCCchhhhhhcCChhHHhhhc
Q 013069 182 LSLGLGVKMITGDQLAIAKETGRRLGMGTNMY------------PS----------SALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 182 ~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~------------~~----------~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
+.+||+|+|+|||++.||+++|++.||..... +. .++.|.+.. .+...++++++...
T Consensus 603 rsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~-~~~~~qld~il~nh 681 (1019)
T KOG0203|consen 603 RSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELP-DMSSEQLDELLQNH 681 (1019)
T ss_pred hhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccc-ccCHHHHHHHHHhC
Confidence 99999999999999999999999999754211 11 122232221 23344567777766
Q ss_pred c--ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 240 D--GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 240 ~--v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
. ||||.||+||+.||+.+|++|.+|+.+|||+||+||||+|||||||| .|+|.+++|||+||++++|++|+..|++|
T Consensus 682 ~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEG 761 (1019)
T KOG0203|consen 682 QEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEG 761 (1019)
T ss_pred CceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccc
Confidence 5 89999999999999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--ccccHHHHHHH
Q 013069 317 RAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLDTVIAI 357 (450)
Q Consensus 317 R~~~~~i~~~~~~~~~~~~~~i~l~~~~~~--~~~pl~~~~~l 357 (450)
|-+|+|+||.+.|.+..++.-+.-.+..++ ..+|+..+.+|
T Consensus 762 RLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL 804 (1019)
T KOG0203|consen 762 RLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTIL 804 (1019)
T ss_pred eehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhh
Confidence 999999999999999876655443333322 55778888887
No 20
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=3.1e-53 Score=465.39 Aligned_cols=377 Identities=20% Similarity=0.222 Sum_probs=286.1
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCCh--------------------------------------------
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDA-------------------------------------------- 36 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~-------------------------------------------- 36 (450)
||++++|++|||||||+|.|++.+|.|....+|...
T Consensus 384 LGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 463 (1151)
T KOG0206|consen 384 LGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDI 463 (1151)
T ss_pred hcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchH
Confidence 799999999999999999999999998644332210
Q ss_pred HHHHHHHHHhccc-------------CCCChHHHHHHHhhcCchh----------------hhhcccEEEEeccCCCCce
Q 013069 37 DTVVLMAARASQV-------------ENLDVIDAAIVGMLADPKE----------------ARADIQEVHFLPFDPTGKR 87 (450)
Q Consensus 37 ~~il~~aa~~~~~-------------~~~~pi~~ai~~~~~~~~~----------------~~~~~~~l~~~pF~~~~kr 87 (450)
.+..+..+.|... ..+.|.+.|++..+.+.+- ....|++++.++|+|.|||
T Consensus 464 ~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKR 543 (1151)
T KOG0206|consen 464 LEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKR 543 (1151)
T ss_pred HHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccce
Confidence 1233333433211 1235889999887653211 2457899999999999999
Q ss_pred EEEEEEccCCeEEEEEcCCHHHHHhhhc-CChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcC--------------
Q 013069 88 TALTYIDSEGKMHRVTKGSPEQILNLLH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKE-------------- 152 (450)
Q Consensus 88 ~svi~~~~~g~~~~~~KGa~~~i~~~~~-~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~-------------- 152 (450)
|||++++++|+..+|||||+..|.+++. +.....++..+++++||.+|+|+||+||+.+++++++
T Consensus 544 MSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~ 623 (1151)
T KOG0206|consen 544 MSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLT 623 (1151)
T ss_pred eEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999998 5567788899999999999999999999999987643
Q ss_pred -----------CCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccC-
Q 013069 153 -----------SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSG- 220 (450)
Q Consensus 153 -----------~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~- 220 (450)
.+|++|+++|.+++||+++++++++|+.|++||||+||+|||+.+||.+||..|++..+......+..
T Consensus 624 ~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~ 703 (1151)
T KOG0206|consen 624 DREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTE 703 (1151)
T ss_pred CHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecC
Confidence 45899999999999999999999999999999999999999999999999999998765332221111
Q ss_pred --------------------------------------------CchhhhhhcC---ChhHHhhh--ccceeecChhhHH
Q 013069 221 --------------------------------------------QDRDESIVAL---PVDELIEK--ADGFAGVFPEHKY 251 (450)
Q Consensus 221 --------------------------------------------~~~~~~~~~~---~~~~~~~~--~~v~a~~~P~~K~ 251 (450)
+.....+... .+-++... +-+|||++|.||+
T Consensus 704 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA 783 (1151)
T KOG0206|consen 704 TSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKA 783 (1151)
T ss_pred ChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHH
Confidence 1111111110 01123333 3389999999999
Q ss_pred HHHHHHhh-cCCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 013069 252 EIVKHLQA-RNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVR 329 (450)
Q Consensus 252 ~iV~~lq~-~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~~~i~~~~~~ 329 (450)
.+|+.+++ .+.++++||||+||++|++.|||||+++ .+..+|..+||+.+.+..+..-.-++ +||+.|.|+.+.++|
T Consensus 784 ~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ily 862 (1151)
T KOG0206|consen 784 LVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILY 862 (1151)
T ss_pred HHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhhee-ecceeHHHHHHHHHH
Confidence 99999975 4899999999999999999999999997 57888999999999885555433333 699999999988888
Q ss_pred HHHH--------HHHHHHHHHhh--------------hcccccHHHHHHH-------HHhccCcccccchhHHHHHHH
Q 013069 330 GIDG--------LSSTEFIQVLE--------------LNFLFTLDTVIAI-------LQTAFTSKKDFGKEERELLWA 378 (450)
Q Consensus 330 ~~~~--------~~~~i~l~~~~--------------~~~~~pl~~~~~l-------~~~~~~~~~~~~~~~~~~~~~ 378 (450)
.+.- +++.+|-.+|. +++.+|...++++ ..+.++.++.+|.......|.
T Consensus 863 fFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~ 940 (1151)
T KOG0206|consen 863 FFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWK 940 (1151)
T ss_pred HHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchH
Confidence 7742 22222222222 4466777777776 555666666666555555554
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=4.6e-51 Score=435.90 Aligned_cols=281 Identities=26% Similarity=0.350 Sum_probs=244.5
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhh--hhcccEEEE
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEA--RADIQEVHF 78 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~--~~~~~~l~~ 78 (450)
||++|+||||||||||+|+|++.+++. ..+.+.++++.+++.++..++| |+++|++.++...+.. ...++..++
T Consensus 296 lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~~s~h-P~a~Aiv~~a~~~~~~~~~~~~~~~~~ 371 (675)
T TIGR01497 296 CGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASLADDT-PEGKSIVILAKQLGIREDDVQSLHATF 371 (675)
T ss_pred hhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcCCCCC-cHHHHHHHHHHHcCCCccccccccceE
Confidence 689999999999999999999998642 2467788899999998887765 9999999876532211 112345678
Q ss_pred eccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcC-ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCC
Q 013069 79 LPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSP 157 (450)
Q Consensus 79 ~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~-~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~ 157 (450)
.||++.++++++.+. +| ..+.||+++.+++.|.. ....+..+++.+++++++|+|++++|++.
T Consensus 372 ~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~~~------------ 435 (675)
T TIGR01497 372 VEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCEDN------------ 435 (675)
T ss_pred EEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEECC------------
Confidence 999999877766443 44 57899999999988853 22345667888899999999999999864
Q ss_pred cEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh
Q 013069 158 WQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 237 (450)
Q Consensus 158 ~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (450)
+++|++++.||+||+++++|++|+++|++++|+|||+..+|..+|+++|+.
T Consensus 436 -~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~---------------------------- 486 (675)
T TIGR01497 436 -RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD---------------------------- 486 (675)
T ss_pred -EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----------------------------
Confidence 999999999999999999999999999999999999999999999999995
Q ss_pred hccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHH
Q 013069 238 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISR 317 (450)
Q Consensus 238 ~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R 317 (450)
+++++++|++|..+|+.+|++|+.|+|+|||.||+|||++|||||||+++++.++++||+++++++|+.|++++++||
T Consensus 487 --~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~av~~GR 564 (675)
T TIGR01497 487 --DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGK 564 (675)
T ss_pred --EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 013069 318 AIFQRMRNYMVRGID 332 (450)
Q Consensus 318 ~~~~~i~~~~~~~~~ 332 (450)
+++-+......|+++
T Consensus 565 ~~~~t~~~~~t~~~~ 579 (675)
T TIGR01497 565 QLLITRGALTTFSIA 579 (675)
T ss_pred HHHHHHHHHheeeec
Confidence 999887777777664
No 22
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-51 Score=437.03 Aligned_cols=309 Identities=30% Similarity=0.372 Sum_probs=260.1
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
|+++|+++||||||||+|+|+|.++.. . .+ ++++++.+++..+..++| |+++||+.++.+.+ ......++.+|
T Consensus 402 l~~v~tvvFDKTGTLT~G~p~v~~v~~--~-~~-~e~~~L~laAalE~~S~H-PiA~AIv~~a~~~~--~~~~~~~~~i~ 474 (713)
T COG2217 402 LAKVDTVVFDKTGTLTEGKPEVTDVVA--L-DG-DEDELLALAAALEQHSEH-PLAKAIVKAAAERG--LPDVEDFEEIP 474 (713)
T ss_pred hccCCEEEEeCCCCCcCCceEEEEEec--C-CC-CHHHHHHHHHHHHhcCCC-hHHHHHHHHHHhcC--CCCccceeeec
Confidence 578999999999999999999998642 2 24 889999999999999887 99999999765432 11122233333
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
.....+ . .+| ..+..|++..+.+.- .+... .....+.+.++|.+++.++.++ ++
T Consensus 475 ---G~Gv~~-~---v~g--~~v~vG~~~~~~~~~---~~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~ 528 (713)
T COG2217 475 ---GRGVEA-E---VDG--ERVLVGNARLLGEEG---IDLPL-LSERIEALESEGKTVVFVAVDG-------------KL 528 (713)
T ss_pred ---cCcEEE-E---ECC--EEEEEcCHHHHhhcC---CCccc-hhhhHHHHHhcCCeEEEEEECC-------------EE
Confidence 111111 1 245 567789999987632 11222 5667788899999999999987 99
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|++++.|++|++++++|++||+.|++++|+|||+..+|.++|+++||+ +
T Consensus 529 ~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~ 578 (713)
T COG2217 529 VGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------E 578 (713)
T ss_pred EEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------h
Confidence 9999999999999999999999999999999999999999999999996 5
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
+++++.|++|.++|+.||++|+.|+|||||+||+|||+.||||||||.|+|.|+++||++|+.+++..++.+|+.||+++
T Consensus 579 v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~ 658 (713)
T COG2217 579 VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATR 658 (713)
T ss_pred heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHhccCcccccchhHHHHHH
Q 013069 321 QRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLW 377 (450)
Q Consensus 321 ~~i~~~~~~~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 377 (450)
++||+|+.|++.++...+.+.++.+ ++++.-.+.|.+++..+..++.|...|
T Consensus 659 ~~IkqNl~~A~~yn~~~iplA~~g~-----l~p~~A~~am~~SSv~VvlNaLRL~~~ 710 (713)
T COG2217 659 RIIKQNLFWAFGYNAIAIPLAAGGL-----LTPWIAALAMSGSSVLVVLNALRLLRS 710 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-----cCHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 9999999999999888887776552 224444588899999999888888765
No 23
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-49 Score=417.99 Aligned_cols=336 Identities=25% Similarity=0.264 Sum_probs=278.5
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
+.++++++||||||||+|++.|.++.+ .....+..+++.+++..+..+.| |+.+||+.|+.+..........+.+..
T Consensus 579 ~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~SeH-Pig~AIv~yak~~~~~~~~~~~~~~~~ 655 (951)
T KOG0207|consen 579 AHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGSEH-PIGKAIVDYAKEKLVEPNPEGVLSFEY 655 (951)
T ss_pred HhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCCcC-chHHHHHHHHHhcccccCccccceeec
Confidence 357999999999999999999998654 33336888999999988888776 999999999875442111112223333
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
|........+. .+|+. ++.|+.+++...- ....+.++..+++-...|..+.++++++ ++
T Consensus 656 ~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l 714 (951)
T KOG0207|consen 656 FPGEGIYVTVT---VDGNE--VLIGNKEWMSRNG---CSIPDDILDALTESERKGQTVVYVAVNG-------------QL 714 (951)
T ss_pred ccCCCcccceE---EeeeE--EeechHHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEEECC-------------EE
Confidence 33333221122 23332 7889999987743 3345567778888889999999999998 99
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|++.++|++|+|+..+|..||+.|++++|+||||..+|..+|+++|+. .
T Consensus 715 ~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------~ 764 (951)
T KOG0207|consen 715 VGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------------------------N 764 (951)
T ss_pred EEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc------------------------------e
Confidence 9999999999999999999999999999999999999999999999986 5
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
+|+++.|+||.++|+.+|+.++.|+|+|||+||+|||.+|||||+|+.+++.|.++|||||+.+++.+++.+|.++|+++
T Consensus 765 V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~ 844 (951)
T KOG0207|consen 765 VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTV 844 (951)
T ss_pred EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccc-ccHHHHHHHHHhccCcccccchhHHHHHHHHhhhhhhcCCCC
Q 013069 321 QRMRNYMVRGIDGLSSTEFIQVLELNFL-FTLDTVIAILQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 390 (450)
Q Consensus 321 ~~i~~~~~~~~~~~~~~i~l~~~~~~~~-~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (450)
.|+|.|+.|++.+++.++.+.++.|+++ +-|.+..--+.|++++..+.-.+..++.|..+.-..+..+.+
T Consensus 845 ~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~~~~~~~~e~ 915 (951)
T KOG0207|consen 845 KRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPTINKLYRYEA 915 (951)
T ss_pred hhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHHHhhhHHHHhhccccccccceeccc
Confidence 9999999999999999999888877633 334455555899999999999888888888876433333334
No 24
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-49 Score=399.60 Aligned_cols=350 Identities=22% Similarity=0.267 Sum_probs=260.9
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCCh-HH---------------------------------HHHHHHHh
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDA-DT---------------------------------VVLMAARA 46 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~-~~---------------------------------il~~aa~~ 46 (450)
||+|+++.+|||||||+|+|.++++.+....++.+. ++ .....+.|
T Consensus 404 LGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalC 483 (1051)
T KOG0210|consen 404 LGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALC 483 (1051)
T ss_pred hcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHh
Confidence 799999999999999999999999877443322221 11 11111222
Q ss_pred ccc---C---------CCChHHHHHHHhhc-----------------CchhhhhcccEEEEeccCCCCceEEEEEEcc-C
Q 013069 47 SQV---E---------NLDVIDAAIVGMLA-----------------DPKEARADIQEVHFLPFDPTGKRTALTYIDS-E 96 (450)
Q Consensus 47 ~~~---~---------~~~pi~~ai~~~~~-----------------~~~~~~~~~~~l~~~pF~~~~kr~svi~~~~-~ 96 (450)
... . ...|.+.||+.... .+.....+|+++..+||+++.|||++++++. +
T Consensus 484 HNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~ 563 (1051)
T KOG0210|consen 484 HNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETT 563 (1051)
T ss_pred ccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCC
Confidence 211 0 01344555543221 1112234799999999999999999999985 6
Q ss_pred CeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcC------------------------
Q 013069 97 GKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKE------------------------ 152 (450)
Q Consensus 97 g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~------------------------ 152 (450)
++...|.|||+.+|...... .+++++...++|++|+|+|.+|.+.+++++++
T Consensus 564 ~evtfylKGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv 639 (1051)
T KOG0210|consen 564 EEVTFYLKGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVV 639 (1051)
T ss_pred ceEEEEEecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHH
Confidence 89999999999998876544 45888899999999999999999999977532
Q ss_pred --CCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------
Q 013069 153 --SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP---------------- 214 (450)
Q Consensus 153 --~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~---------------- 214 (450)
..|.+++++|+.++||+++++++.+++.||++|++|||+|||+.+||..+|+..++......
T Consensus 640 ~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~e 719 (1051)
T KOG0210|consen 640 ERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNE 719 (1051)
T ss_pred HHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHH
Confidence 34799999999999999999999999999999999999999999999999999998754322
Q ss_pred ----------CccccCCchhhhhhcC--ChhHHhhh--ccceeecChhhHHHHHHHHhhc-CCEEEEecCCCCChHhHhh
Q 013069 215 ----------SSALSGQDRDESIVAL--PVDELIEK--ADGFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKK 279 (450)
Q Consensus 215 ----------~~~l~~~~~~~~~~~~--~~~~~~~~--~~v~a~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~ 279 (450)
..++.|....-.+... ++-++... +-++|||+|.||+++++.+|+. |..|++||||-||++|+++
T Consensus 720 L~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~ 799 (1051)
T KOG0210|consen 720 LNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQA 799 (1051)
T ss_pred HHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheee
Confidence 2233333322222211 12233333 2379999999999999999986 8999999999999999999
Q ss_pred CCeeEEe-ccchHHHhhccCEEecCCCchHHHHHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHH-HHhhhcccccHHHHH
Q 013069 280 ADIGIAV-ADATDAARSAADIVLTEPGLNVIITAVL-ISRAIFQRMRNYMVRGID-GLSSTEFI-QVLELNFLFTLDTVI 355 (450)
Q Consensus 280 AdvGIa~-~~~~~~a~~aaDivl~~~~l~~i~~~I~-~~R~~~~~i~~~~~~~~~-~~~~~i~l-~~~~~~~~~pl~~~~ 355 (450)
||+||++ |+...+|.-|||+.+++ |+.+.+++. +||..|+|-.+...|-+. ++...+.- .++.++.|.|+.+.+
T Consensus 800 A~~GiGI~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~Lyq 877 (1051)
T KOG0210|consen 800 ADVGIGIVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQ 877 (1051)
T ss_pred cccceeeecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhh
Confidence 9999998 47888999999999987 888888887 599999999877666654 22222221 234444555655554
Q ss_pred H
Q 013069 356 A 356 (450)
Q Consensus 356 ~ 356 (450)
-
T Consensus 878 G 878 (1051)
T KOG0210|consen 878 G 878 (1051)
T ss_pred h
Confidence 4
No 25
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-48 Score=406.16 Aligned_cols=263 Identities=25% Similarity=0.369 Sum_probs=218.3
Q ss_pred cccEEEEeccCCCCceEEEEEEcc-CCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCC-
Q 013069 72 DIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG- 149 (450)
Q Consensus 72 ~~~~l~~~pF~~~~kr~svi~~~~-~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~- 149 (450)
.+.+++.+||+|.-+||||++.++ +.+++.|+|||||.|.+.|. .+.+++.+++.+++|+.+|+|++++|+|+++..
T Consensus 600 ~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~-p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~ 678 (1140)
T KOG0208|consen 600 EISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICK-PETVPADYQEVLKEYTHQGFRVIALASKELETST 678 (1140)
T ss_pred ceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcC-cccCCccHHHHHHHHHhCCeEEEEEecCccCcch
Confidence 467889999999999999999874 56789999999999999995 467889999999999999999999999999866
Q ss_pred -------CcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc-----
Q 013069 150 -------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA----- 217 (450)
Q Consensus 150 -------~~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~----- 217 (450)
.++..|++++|+|++.|++++|+.++.+|++|.+++|+++|+||||..||..+|++|||..+......
T Consensus 679 ~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~ 758 (1140)
T KOG0208|consen 679 LQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEP 758 (1140)
T ss_pred HHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccC
Confidence 36778999999999999999999999999999999999999999999999999999999753210000
Q ss_pred -------------------ccC-Cchh----------hhhh---------c-----------CChhHHhhhccceeecCh
Q 013069 218 -------------------LSG-QDRD----------ESIV---------A-----------LPVDELIEKADGFAGVFP 247 (450)
Q Consensus 218 -------------------l~~-~~~~----------~~~~---------~-----------~~~~~~~~~~~v~a~~~P 247 (450)
..+ .+.+ +.+. + .-++.++.++.+|||++|
T Consensus 759 ~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP 838 (1140)
T KOG0208|consen 759 PEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSP 838 (1140)
T ss_pred CccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCc
Confidence 000 0000 0000 0 013456778899999999
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHH----HHHHH
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRA----IFQRM 323 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~----~~~~i 323 (450)
+||.++|+.||+.|+.|+|+|||+||+.|||+||+||+++++ .|.-||.+.-.-++.+++..+|++||. .|...
T Consensus 839 ~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea--EASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~F 916 (1140)
T KOG0208|consen 839 DQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEA--EASVAAPFTSKTPSISCVPDVIREGRAALVTSFACF 916 (1140)
T ss_pred hhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhh--hHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHH
Confidence 999999999999999999999999999999999999999753 467789998888899999999999998 45555
Q ss_pred HHHHHHHHHHHHHH
Q 013069 324 RNYMVRGIDGLSST 337 (450)
Q Consensus 324 ~~~~~~~~~~~~~~ 337 (450)
|...+|++..+...
T Consensus 917 kYMalYs~iqFisv 930 (1140)
T KOG0208|consen 917 KYMALYSAIQFISV 930 (1140)
T ss_pred HHHHHHHHHHHHhh
Confidence 55566666543333
No 26
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=3.9e-45 Score=399.95 Aligned_cols=305 Identities=26% Similarity=0.312 Sum_probs=248.1
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
|+++|++|||||||||+|+|+|.++.. ..+.++++++.+++..+..++| |+++||+.++...+ + .+|
T Consensus 433 l~~v~~v~fDKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~s~h-Pia~Ai~~~a~~~~-----~----~~~ 499 (741)
T PRK11033 433 LGRVTTVAFDKTGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQGSTH-PLAQAIVREAQVRG-----L----AIP 499 (741)
T ss_pred hhCCCEEEEeCCCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcCCCC-HHHHHHHHHHHhcC-----C----CCC
Confidence 689999999999999999999998642 2356788999999888877655 99999998764321 1 146
Q ss_pred cCCCCceEEEE-EE-ccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCc
Q 013069 81 FDPTGKRTALT-YI-DSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPW 158 (450)
Q Consensus 81 F~~~~kr~svi-~~-~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~ 158 (450)
|.+..+.+.-. +. ..+|+. +..|+++.+.+ +.+.+...++++..+|++++++|++.
T Consensus 500 ~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~------------- 557 (741)
T PRK11033 500 EAESQRALAGSGIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND------------- 557 (741)
T ss_pred CCcceEEEeeEEEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------
Confidence 66655554321 21 135543 45689998765 12334556778899999999999875
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhh
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 238 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (450)
+++|+++++|++|++++++|++|++.|++++|+|||+..++..+|+++||.
T Consensus 558 ~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~----------------------------- 608 (741)
T PRK11033 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID----------------------------- 608 (741)
T ss_pred EEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-----------------------------
Confidence 999999999999999999999999999999999999999999999999994
Q ss_pred ccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHH
Q 013069 239 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRA 318 (450)
Q Consensus 239 ~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~ 318 (450)
.++++.|++|..+|+.+++. +.|+|+|||+||+|||+.|||||+|+++++.++++||+++..+++..+..+|.+||+
T Consensus 609 --~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~ 685 (741)
T PRK11033 609 --FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685 (741)
T ss_pred --eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHH
Confidence 46789999999999999965 589999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHhccCcccccchhHHHHHH
Q 013069 319 IFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLW 377 (450)
Q Consensus 319 ~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 377 (450)
++++|++|+.|++.++...+.+.+.. ++| ++.-.+.+..++..+..++.|...|
T Consensus 686 ~~~~I~~nl~~a~~~n~~~i~~a~~g---~~~--~~~a~~~~~~ss~~v~~Nslrl~~~ 739 (741)
T PRK11033 686 THANIRQNITIALGLKAIFLVTTLLG---ITG--LWLAVLADSGATALVTANALRLLRK 739 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh---hhH--HHHHHHHHcChHHHHHHHHHhhccc
Confidence 99999999999988776665554322 122 2222366777777777777776654
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=6.5e-44 Score=376.63 Aligned_cols=257 Identities=35% Similarity=0.528 Sum_probs=224.0
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
||++|++|||||||||+|+|+|.++++. +. +.. ..||++.|++.++.. +.++..|
T Consensus 227 l~~v~~i~fDKTGTLT~~~~~v~~~~~~----~~------------~~~-s~hp~~~ai~~~~~~--------~~~~~~~ 281 (499)
T TIGR01494 227 LGKVDYICSDKTGTLTKNEMSFKKVSVL----GG------------EYL-SGHPDERALVKSAKW--------KILNVFE 281 (499)
T ss_pred ccCCcEEEeeCCCccccCceEEEEEEec----CC------------CcC-CCChHHHHHHHHhhh--------cCcceec
Confidence 6899999999999999999999987531 11 222 346999999987753 1235789
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
|++..++|++++.+.++ .++||+++.+.+.|.. +.+..++++.+|+|++++|++. ++
T Consensus 282 f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~ 338 (499)
T TIGR01494 282 FSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TL 338 (499)
T ss_pred cCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eE
Confidence 99999999998875333 4789999999998742 3344557888999999999886 89
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|++.++|++|++++++|+.|+++|++++|+|||+..+|..+|+++|+
T Consensus 339 ~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------------------------------- 386 (499)
T TIGR01494 339 LGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------------------------------- 386 (499)
T ss_pred EEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc--------------------------------
Confidence 999999999999999999999999999999999999999999999987
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
+++++|++|.++|+.+|+.|+.|+|+|||.||+||++.|||||+|+ ++++||++++++++..+..++.+||+++
T Consensus 387 -~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~ 460 (499)
T TIGR01494 387 -FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTF 460 (499)
T ss_pred -eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHH
Confidence 6889999999999999999999999999999999999999999997 6889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 013069 321 QRMRNYMVRGIDGLSSTEFIQVL 343 (450)
Q Consensus 321 ~~i~~~~~~~~~~~~~~i~l~~~ 343 (450)
+++++++.|++.++...+.+.+.
T Consensus 461 ~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 461 STIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998876666555543
No 28
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=8.6e-42 Score=379.75 Aligned_cols=315 Identities=28% Similarity=0.332 Sum_probs=260.7
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
|+++|++|||||||||+|+|+|.++.. ..+.++++++.+++..+..++| |+++||+.++.+.. .... ..
T Consensus 514 l~~v~~v~fDKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s~h-p~a~Ai~~~~~~~~--~~~~-----~~ 582 (834)
T PRK10671 514 ASTLDTLVFDKTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGSSH-PLARAILDKAGDMT--LPQV-----NG 582 (834)
T ss_pred hcCCCEEEEcCCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHhhCC--CCCc-----cc
Confidence 689999999999999999999987542 2356788899999988888776 99999998764211 0111 12
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
|.....+ ++... .+|. .+.+|+++.+.+.... .+.+...+++++++|.++++++++. .+
T Consensus 583 ~~~~~g~-Gv~~~-~~g~--~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~ 641 (834)
T PRK10671 583 FRTLRGL-GVSGE-AEGH--ALLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KA 641 (834)
T ss_pred ceEecce-EEEEE-ECCE--EEEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EE
Confidence 2211111 12111 2453 4567999987653211 2345666778889999999999876 89
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|++.+.|++|++++++|++|++.|++++|+|||+..++..+++++|+. +
T Consensus 642 ~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~ 691 (834)
T PRK10671 642 AALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------E 691 (834)
T ss_pred EEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------E
Confidence 9999999999999999999999999999999999999999999999995 3
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
+|+++.|++|.++++.++.+++.|+|+|||.||++|++.||+||+|+++++.++++||++++.+++.+|..++++||+++
T Consensus 692 ~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~ 771 (834)
T PRK10671 692 VIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATL 771 (834)
T ss_pred EEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccc--ccHHHHHHHHHhccCcccccchhHHHHHH
Q 013069 321 QRMRNYMVRGIDGLSSTEFIQVLELNFL--FTLDTVIAILQTAFTSKKDFGKEERELLW 377 (450)
Q Consensus 321 ~~i~~~~~~~~~~~~~~i~l~~~~~~~~--~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 377 (450)
.+|++|+.|++.++..++.+.++.+++. +.++|+..-+.|.+++..+..++.|...|
T Consensus 772 ~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~~ 830 (834)
T PRK10671 772 RNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLRF 830 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHHHHHHhcccceeehhhhHHhcCC
Confidence 9999999999999998888887655432 24667777789999999999999887644
No 29
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-42 Score=354.22 Aligned_cols=283 Identities=26% Similarity=0.346 Sum_probs=222.3
Q ss_pred ccccEEEeCcccccccCceEEEeEeeecccC---------CCChHHHHHHHHHhc--cc---CCCChHHHHHHHhhcCch
Q 013069 2 AGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG---------GVDADTVVLMAARAS--QV---ENLDVIDAAIVGMLADPK 67 (450)
Q Consensus 2 g~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~---------~~~~~~il~~aa~~~--~~---~~~~pi~~ai~~~~~~~~ 67 (450)
|++|+.|||||||||+..|.|..+- .... ....+.+..+|++.+ .. --.||+++|.+..++..-
T Consensus 477 GkvdvCCFDKTGTLT~d~lvv~Gva--g~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~ 554 (1160)
T KOG0209|consen 477 GKVDVCCFDKTGTLTEDDLVVEGVA--GLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNL 554 (1160)
T ss_pred CceeEEEecCCCccccccEEEEecc--cccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCccc
Confidence 7899999999999999999998742 1110 112234444444332 22 235899999999875422
Q ss_pred hh------h----hcccEEEEeccCCCCceEEEEEEcc----CCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHH
Q 013069 68 EA------R----ADIQEVHFLPFDPTGKRTALTYIDS----EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAE 133 (450)
Q Consensus 68 ~~------~----~~~~~l~~~pF~~~~kr~svi~~~~----~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~ 133 (450)
+. + ..+++.+.+.|.|.-|||+++.... +-+++..+|||||.|.++. .+++..+++...+|++
T Consensus 555 ~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml---~dvP~dY~~iYk~ytR 631 (1160)
T KOG0209|consen 555 EKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEML---RDVPKDYDEIYKRYTR 631 (1160)
T ss_pred ccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHH---HhCchhHHHHHHHHhh
Confidence 11 1 2467789999999999999987642 2367889999999999987 4678889999999999
Q ss_pred hcchhhhhhceecCC--------CCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH
Q 013069 134 RGLRSLAVAYQEVPE--------GSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR 205 (450)
Q Consensus 134 ~Glr~l~vA~~~~~~--------~~~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~ 205 (450)
+|.|||+++|+.++. ..++..|+++.|.|++.+.-|+|+|++++|+.|++++++++||||||+.||.++|++
T Consensus 632 ~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~ 711 (1160)
T KOG0209|consen 632 QGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKE 711 (1160)
T ss_pred ccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehhe
Confidence 999999999999872 246788999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCcc---------------------------------------ccCCchhhhhhcCChhHHhhhccceeecC
Q 013069 206 LGMGTNMYPSSA---------------------------------------LSGQDRDESIVALPVDELIEKADGFAGVF 246 (450)
Q Consensus 206 lgi~~~~~~~~~---------------------------------------l~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 246 (450)
+||.....+... +.|...+.......+..++....+|||+.
T Consensus 712 v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARva 791 (1160)
T KOG0209|consen 712 VGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVA 791 (1160)
T ss_pred eeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeC
Confidence 999754211111 11222221122222345666677999999
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccc
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA 289 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~ 289 (450)
|.||..++..|++.|+.++|+|||.||+.|||.||||||+-++
T Consensus 792 P~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~ 834 (1160)
T KOG0209|consen 792 PKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNN 834 (1160)
T ss_pred hhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcC
Confidence 9999999999999999999999999999999999999998543
No 30
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=2.8e-40 Score=352.76 Aligned_cols=284 Identities=29% Similarity=0.386 Sum_probs=230.6
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCC--hHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhccc-EEE
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD--ADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ-EVH 77 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~--~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~-~l~ 77 (450)
||++|++|||||||||+|+|+|.++.. . .+.+ .++++.+++.++...+| |++.|++.++...+..... + ...
T Consensus 243 l~~v~~i~fDKTGTLT~~~~~v~~~~~--~-~~~~~~~~~~l~~a~~~e~~~~h-p~~~Ai~~~~~~~~~~~~~-~~~~~ 317 (556)
T TIGR01525 243 LAKVKTVVFDKTGTLTTGKPTVVDVEP--L-DDASISEEELLALAAALEQSSSH-PLARAIVRYAKKRGLELPK-QEDVE 317 (556)
T ss_pred hhcCCEEEEeCCCCCcCCceEEEEEEe--c-CCCCccHHHHHHHHHHHhccCCC-hHHHHHHHHHHhcCCCccc-ccCee
Confidence 689999999999999999999998653 1 2333 77888888888877665 9999999987542211100 1 112
Q ss_pred EeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCC
Q 013069 78 FLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSP 157 (450)
Q Consensus 78 ~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~ 157 (450)
.+| .+..... .+|. ..+..|+++++. +. ..+. ..++..+++++++|+|+++++++.
T Consensus 318 ~~~----~~gi~~~---~~g~-~~~~lg~~~~~~--~~-~~~~-~~~~~~~~~~~~~g~~~~~v~~~~------------ 373 (556)
T TIGR01525 318 EVP----GKGVEAT---VDGQ-EEVRIGNPRLLE--LA-AEPI-SASPDLLNEGESQGKTVVFVAVDG------------ 373 (556)
T ss_pred Eec----CCeEEEE---ECCe-eEEEEecHHHHh--hc-CCCc-hhhHHHHHHHhhCCcEEEEEEECC------------
Confidence 221 1122222 2342 356679998872 11 1111 223455677889999999999865
Q ss_pred cEEEEeccCCCCCCcchHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHh
Q 013069 158 WQFIGLIPLFDPPIHDSAETIRRALSLG-LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELI 236 (450)
Q Consensus 158 ~~~lG~i~l~D~lr~~~~~~I~~l~~~G-i~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (450)
+++|.+.++|++||+++++|+.|++.| ++++|+|||+..++..+++++|+.
T Consensus 374 -~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~--------------------------- 425 (556)
T TIGR01525 374 -ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID--------------------------- 425 (556)
T ss_pred -EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC---------------------------
Confidence 999999999999999999999999999 999999999999999999999995
Q ss_pred hhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 237 EKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 237 ~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
++|+++.|++|..+++.++..++.|+|+|||.||++|++.||+||+++++++.+++.||+++.+++++.+..++++|
T Consensus 426 ---~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~ 502 (556)
T TIGR01525 426 ---EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAIDLS 502 (556)
T ss_pred ---eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013069 317 RAIFQRMRNYMVRGIDGLSSTEFIQVLE 344 (450)
Q Consensus 317 R~~~~~i~~~~~~~~~~~~~~i~l~~~~ 344 (450)
|+++++|++++.|++.++..++.+.+..
T Consensus 503 r~~~~~i~~nl~~a~~~N~~~i~~a~~g 530 (556)
T TIGR01525 503 RKTRRIIKQNLAWALGYNLVAIPLAAGG 530 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887777766544
No 31
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=7e-40 Score=349.27 Aligned_cols=278 Identities=31% Similarity=0.409 Sum_probs=229.2
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
|+++|++|||||||||+|+|+|.++.. ..+.++++++.+++.++..++| |+++|++.++...+.....+..++.+|
T Consensus 274 l~~v~~i~fDKTGTLT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s~H-Pia~Ai~~~~~~~~~~~~~~~~~~~~~ 349 (562)
T TIGR01511 274 AANIDTVVFDKTGTLTQGKPTVTDVHV---FGDRDRTELLALAAALEAGSEH-PLAKAIVSYAKEKGITLVEVSDFKAIP 349 (562)
T ss_pred hhCCCEEEECCCCCCcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccCCC-hHHHHHHHHHHhcCCCcCCCCCeEEEC
Confidence 689999999999999999999998542 2356788899999988888776 999999988753221111122222222
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
.+.+... .+| ..+..|+++++.+.. ..+ .++.++|.+++.++.+. ++
T Consensus 350 ----g~Gi~~~---~~g--~~~~iG~~~~~~~~~---~~~--------~~~~~~g~~~~~~~~~~-------------~~ 396 (562)
T TIGR01511 350 ----GIGVEGT---VEG--TKIQLGNEKLLGENA---IKI--------DGKAEQGSTSVLVAVNG-------------EL 396 (562)
T ss_pred ----CceEEEE---ECC--EEEEEECHHHHHhCC---CCC--------ChhhhCCCEEEEEEECC-------------EE
Confidence 1222222 244 456789999875421 111 12457899998888765 99
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
+|++.++|++||+++++|++|++.|++++|+|||+..++..+++++|+.
T Consensus 397 ~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------- 445 (562)
T TIGR01511 397 AGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------------- 445 (562)
T ss_pred EEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------
Confidence 9999999999999999999999999999999999999999999999993
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 320 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~ 320 (450)
+|+++.|++|.++++.++.+++.|+|+|||.||++|++.||+||+++.+++.++++||+++.++++..+..++.+||+++
T Consensus 446 ~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~ 525 (562)
T TIGR01511 446 VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTL 525 (562)
T ss_pred EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999989999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc
Q 013069 321 QRMRNYMVRGIDGLSSTEFIQVLELN 346 (450)
Q Consensus 321 ~~i~~~~~~~~~~~~~~i~l~~~~~~ 346 (450)
++|++|+.|++.++..++.+.++.++
T Consensus 526 ~~i~qn~~~a~~~n~~~i~la~~~~~ 551 (562)
T TIGR01511 526 RRIKQNLLWAFGYNVIAIPIAAGVLY 551 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999988888777665443
No 32
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=3.1e-39 Score=342.98 Aligned_cols=290 Identities=29% Similarity=0.404 Sum_probs=232.6
Q ss_pred CccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEec
Q 013069 1 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLP 80 (450)
Q Consensus 1 Lg~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~p 80 (450)
||+++++|||||||||+|+|+|.++.. .+++.+++..+...+| |++.|+++++...+ .+.....+|
T Consensus 243 l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~~~~h-p~~~Ai~~~~~~~~----~~~~~~~~~ 308 (536)
T TIGR01512 243 LAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQASSH-PLARAIVDYARKRE----NVESVEEVP 308 (536)
T ss_pred hcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhccCCC-cHHHHHHHHHHhcC----CCcceEEec
Confidence 689999999999999999999988531 3788888877776655 99999998875422 223333333
Q ss_pred cCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEE
Q 013069 81 FDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQF 160 (450)
Q Consensus 81 F~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~ 160 (450)
. +..... .+|+ .+..|+++++.+... ..+..+|.+++.++.+. .+
T Consensus 309 g----~gi~~~---~~g~--~~~ig~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~-------------~~ 353 (536)
T TIGR01512 309 G----EGVRAV---VDGG--EVRIGNPRSLEAAVG-------------ARPESAGKTIVHVARDG-------------TY 353 (536)
T ss_pred C----CeEEEE---ECCe--EEEEcCHHHHhhcCC-------------cchhhCCCeEEEEEECC-------------EE
Confidence 1 111111 2454 345799887644211 14566788888887654 99
Q ss_pred EEeccCCCCCCcchHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc
Q 013069 161 IGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 161 lG~i~l~D~lr~~~~~~I~~l~~~Gi-~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
+|.+.++|++|++++++|++|++.|+ +++|+|||+..++..+++++|+.
T Consensus 354 ~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~------------------------------ 403 (536)
T TIGR01512 354 LGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID------------------------------ 403 (536)
T ss_pred EEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh------------------------------
Confidence 99999999999999999999999999 99999999999999999999995
Q ss_pred cceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec-cchHHHhhccCEEecCCCchHHHHHHHHHHH
Q 013069 240 DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRA 318 (450)
Q Consensus 240 ~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~ 318 (450)
++|+++.|++|..+++.++..++.|+|+|||.||++|++.||+||+++ ++++.++.+||+++.++++..+..++.+||+
T Consensus 404 ~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~ 483 (536)
T TIGR01512 404 EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARR 483 (536)
T ss_pred hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHH
Confidence 368899999999999999999999999999999999999999999999 7899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHhccCcccccchhHHH
Q 013069 319 IFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERE 374 (450)
Q Consensus 319 ~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~ 374 (450)
++++|++|+.|++.++..++.+.+..+ +.++...+.|.+++..+..++.|.
T Consensus 484 ~~~~i~~nl~~a~~~n~~~i~~a~~G~-----~~p~~aa~~m~~ss~~v~~ns~r~ 534 (536)
T TIGR01512 484 TRRIVKQNVVIALGIILLLILLALFGV-----LPLWLAVLGHEGSTVLVILNALRL 534 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh-----ccHHHHHHHHcChHHHHHHHHHhh
Confidence 999999999999988777776655321 222233366666776666655543
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-38 Score=311.63 Aligned_cols=266 Identities=27% Similarity=0.403 Sum_probs=230.1
Q ss_pred ccccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhh--hhccc-EEEE
Q 013069 2 AGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEA--RADIQ-EVHF 78 (450)
Q Consensus 2 g~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~--~~~~~-~l~~ 78 (450)
|.+|++..|||||+|.|+-.-.+.+ ...|.+.+++...|..++-.... |-.+.|+..+.+.... ....+ .-.+
T Consensus 297 GDvdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl~DeT-pEGrSIV~LA~~~~~~~~~~~~~~~~~f 372 (681)
T COG2216 297 GDVDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASLADET-PEGRSIVELAKKLGIELREDDLQSHAEF 372 (681)
T ss_pred CCccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhhccCC-CCcccHHHHHHHhccCCCccccccccee
Confidence 6799999999999999987666643 24689999999888887766544 8888888876543211 11222 3578
Q ss_pred eccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCCh-hhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCC
Q 013069 79 LPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKS-KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSP 157 (450)
Q Consensus 79 ~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~-~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~ 157 (450)
.||+.+.++.++-. .++ ..+.||+.+.+........ ..++.++...++-++.|-++|.|+.++
T Consensus 373 vpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~------------ 436 (681)
T COG2216 373 VPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG------------ 436 (681)
T ss_pred eecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECC------------
Confidence 99998876655443 233 5678999999999887443 478899999999999999999999877
Q ss_pred cEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh
Q 013069 158 WQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 237 (450)
Q Consensus 158 ~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (450)
+++|++.+.|-++++.+|-+.+||+.|++.+|+||||+.||..+|++.|++
T Consensus 437 -~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD---------------------------- 487 (681)
T COG2216 437 -RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD---------------------------- 487 (681)
T ss_pred -EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch----------------------------
Confidence 999999999999999999999999999999999999999999999999996
Q ss_pred hccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHH
Q 013069 238 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISR 317 (450)
Q Consensus 238 ~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R 317 (450)
+..++++||+|.++|+.-|.+|+.|+|+|||.||+|||.+||||+||.+|+.+||++++.|=++++...+.+.+..|+
T Consensus 488 --dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGK 565 (681)
T COG2216 488 --DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGK 565 (681)
T ss_pred --hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceehHhhhhh
Confidence 467999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred H
Q 013069 318 A 318 (450)
Q Consensus 318 ~ 318 (450)
+
T Consensus 566 q 566 (681)
T COG2216 566 Q 566 (681)
T ss_pred h
Confidence 8
No 34
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.96 E-value=5.4e-29 Score=233.08 Aligned_cols=211 Identities=32% Similarity=0.424 Sum_probs=157.7
Q ss_pred ccEEEeCcccccccCceEEEeEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcccEEEEeccCC
Q 013069 4 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 83 (450)
Q Consensus 4 i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~l~~~pF~~ 83 (450)
|++||||||||||+|+|.+ . . .+...++.++...+..++| |++.++..+....... ..... +.++
T Consensus 1 i~~i~fDktGTLt~~~~~v-~-----~---~~~~~~~~~~~~~~~~s~~-p~~~~~~~~~~~~~~~-~~~~~--~~~~-- 65 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV-A-----P---PSNEAALAIAAALEQGSEH-PIGKAIVEFAKNHQWS-KSLES--FSEF-- 65 (215)
T ss_dssp ESEEEEECCTTTBESHHEE-E-----S---CSHHHHHHHHHHHHCTSTS-HHHHHHHHHHHHHHHH-SCCEE--EEEE--
T ss_pred CeEEEEecCCCcccCeEEE-E-----e---ccHHHHHHHHHHhhhcCCC-cchhhhhhhhhhccch-hhhhh--heee--
Confidence 6899999999999999999 1 1 5677888888877777776 9999999876532211 11111 1111
Q ss_pred CCceEEEEEEccCCeEEEEEcCCHHHHHhhhcCChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEEEEe
Q 013069 84 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 163 (450)
Q Consensus 84 ~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~ 163 (450)
..++..... ++. +. |+++++....... .............|...+.++++ +.++|.
T Consensus 66 -~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 121 (215)
T PF00702_consen 66 -IGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAVN-------------LIFLGL 121 (215)
T ss_dssp -TTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEES-------------HEEEEE
T ss_pred -eeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceeec-------------CeEEEE
Confidence 111111111 122 23 8888887755321 11222233345666666666653 499999
Q ss_pred ccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcccee
Q 013069 164 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 243 (450)
Q Consensus 164 i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 243 (450)
+.+.|++|++++++|+.|+++|++++|+|||+..++..+++++||... .+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~----------------------------~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS----------------------------IVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE----------------------------EEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc----------------------------cccc
Confidence 999999999999999999999999999999999999999999999521 2799
Q ss_pred ec--ChhhH--HHHHHHHhhcCCEEEEecCCCCChHhHhhCC
Q 013069 244 GV--FPEHK--YEIVKHLQARNHICGMIGNGVNDAPALKKAD 281 (450)
Q Consensus 244 ~~--~P~~K--~~iV~~lq~~g~~v~~iGDG~ND~~al~~Ad 281 (450)
++ +|++| ..+++.|+..++.|+|+|||.||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
No 35
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.65 E-value=1.1e-15 Score=127.98 Aligned_cols=116 Identities=28% Similarity=0.416 Sum_probs=107.2
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhh
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 238 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (450)
...+.++---++-++++++|++|++. ++|++.|||..-+....|..+||+..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 67888888899999999999999999 99999999999999999999999743
Q ss_pred ccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe-c--cchHHHhhccCEEecC
Q 013069 239 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-A--DATDAARSAADIVLTE 303 (450)
Q Consensus 239 ~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~-~--~~~~~a~~aaDivl~~ 303 (450)
.+|+...|+.|..+++.|+.+++.|.|+|||+||.+||+.||+||+. + +.+..+.++||+++.+
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 47999999999999999999999999999999999999999999986 3 5778888999999976
No 36
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.23 E-value=4.2e-11 Score=119.34 Aligned_cols=131 Identities=19% Similarity=0.241 Sum_probs=100.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccce-eecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~-a~~~P 247 (450)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|+.....+...+...... ..+. .-+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~lt--------------g~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLT--------------GNVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEE--------------eEecCccCCc
Confidence 58999999999999999999999999988888999999985211000000000000 0000 01234
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
..|.++++.+.++ ...|+|+|||.||.+|++.|++|||+ ++.+.+++.||.++..+++.+++.++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6788888887654 35799999999999999999999999 899999999999999999999987764
No 37
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.23 E-value=5.8e-11 Score=112.73 Aligned_cols=151 Identities=26% Similarity=0.330 Sum_probs=105.1
Q ss_pred ccCCCC-CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccc-c---CC-----chhh------
Q 013069 164 IPLFDP-PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-S---GQ-----DRDE------ 225 (450)
Q Consensus 164 i~l~D~-lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~l-~---~~-----~~~~------ 225 (450)
+.-.|. +.+.+.++|++|++.|+++++.||+....+..+.+.+|+....+ ++..+ . +. ..+.
T Consensus 14 Ll~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~ 93 (230)
T PRK01158 14 ITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYS 93 (230)
T ss_pred cCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHH
Confidence 333344 67899999999999999999999999999999999999864221 11111 0 00 0000
Q ss_pred hh--------------------------hcCC---hhHHhhhcc---------ceeecChh--hHHHHHHHHhhc----C
Q 013069 226 SI--------------------------VALP---VDELIEKAD---------GFAGVFPE--HKYEIVKHLQAR----N 261 (450)
Q Consensus 226 ~~--------------------------~~~~---~~~~~~~~~---------v~a~~~P~--~K~~iV~~lq~~----g 261 (450)
.. ...+ ..+.++... .+.++.|. .|...++.+.+. .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~ 173 (230)
T PRK01158 94 ELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDP 173 (230)
T ss_pred HHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCH
Confidence 00 0000 001111110 01233333 388888777654 2
Q ss_pred CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 262 HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 262 ~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
..++++||+.||.+|++.|++|+||+|+.+.+++.||+|+.+++-.++.++|.
T Consensus 174 ~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 174 EEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred HHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 45999999999999999999999999999999999999999999999998886
No 38
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.20 E-value=9e-11 Score=109.66 Aligned_cols=131 Identities=16% Similarity=0.148 Sum_probs=97.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
+++|++.+.|+.+++.| ++.++||-....+..+++.+|+.....+...+.+.+. + .......++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~---~------------tG~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR---V------------VGYQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCe---e------------ECeeecCcc
Confidence 47999999999999975 9999999999999999999999632111111110000 0 000114578
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
+|..+++.+++.+..+.|+|||.||.+|++.||+||++. +.+..+++||=.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~-ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec-CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 899999999888888999999999999999999999995 5556666665544455677788777765
No 39
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.20 E-value=9.7e-11 Score=114.06 Aligned_cols=66 Identities=23% Similarity=0.240 Sum_probs=58.8
Q ss_pred hHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+|+..++.|.+. | ..|+++|||.||.+||+.|++|+||+||.+.+|++||+|+.+++-.++.++|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 577777777654 2 45999999999999999999999999999999999999999999999998886
No 40
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.19 E-value=1.8e-10 Score=111.80 Aligned_cols=154 Identities=19% Similarity=0.196 Sum_probs=108.1
Q ss_pred EeccCCCC-CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCc-------cccCCchh-------
Q 013069 162 GLIPLFDP-PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSS-------ALSGQDRD------- 224 (450)
Q Consensus 162 G~i~l~D~-lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~-------~l~~~~~~------- 224 (450)
|.+.-.+. +.+.++++|+++++.|+++.++||++...+..+.+.+++....+ ++. .+.....+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 88999999999999999999999999999999999999975111 000 00000000
Q ss_pred -------------------------h---------------------hhh-------c---CChhHHh---h-h----cc
Q 013069 225 -------------------------E---------------------SIV-------A---LPVDELI---E-K----AD 240 (450)
Q Consensus 225 -------------------------~---------------------~~~-------~---~~~~~~~---~-~----~~ 240 (450)
. ... . ....+.. . . ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0 000 0 0000110 0 0 00
Q ss_pred c-------eeecCh--hhHHHHHHHHhhc-CC---EEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCch
Q 013069 241 G-------FAGVFP--EHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLN 307 (450)
Q Consensus 241 v-------~a~~~P--~~K~~iV~~lq~~-g~---~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~ 307 (450)
. +.++.| .+|+..++.+.+. |- .|+++||+.||.+||+.|+.||||+|+.+.+++.||++...++-+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 1 123333 3699888888774 43 499999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 013069 308 VIITAVLI 315 (450)
Q Consensus 308 ~i~~~I~~ 315 (450)
+|.++|+.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99998874
No 41
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.15 E-value=1.6e-10 Score=108.87 Aligned_cols=145 Identities=21% Similarity=0.266 Sum_probs=101.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccCC-c-------hhhh------------
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQ-D-------RDES------------ 226 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~l~~~-~-------~~~~------------ 226 (450)
.+.+.+.++|++|++.|+++++.||+....+..+.+.+++....+ ++..+... . ....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 478899999999999999999999999999999999999864211 11111100 0 0000
Q ss_pred --hh-cC------------C---hhHHhhhcc-------ceeecCh--hhHHHHHHHHhhc-C---CEEEEecCCCCChH
Q 013069 227 --IV-AL------------P---VDELIEKAD-------GFAGVFP--EHKYEIVKHLQAR-N---HICGMIGNGVNDAP 275 (450)
Q Consensus 227 --~~-~~------------~---~~~~~~~~~-------v~a~~~P--~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~ 275 (450)
.. .. . ....+.... .+..+.| ..|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00 00 0 001111111 1123333 4788888887664 2 35999999999999
Q ss_pred hHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHH
Q 013069 276 ALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 276 al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
|++.|++|++|+|+.+.+++.||+|+..++-.+|.++|
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 99999999999999999999999999988888887653
No 42
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.15 E-value=2.5e-10 Score=111.43 Aligned_cols=146 Identities=15% Similarity=0.184 Sum_probs=102.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCcccc---CC----------------------
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALS---GQ---------------------- 221 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~l~---~~---------------------- 221 (450)
.+.+.++++|++|++.|+++++.||++...+..+.+++|+....+ ++..+. +.
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 488899999999999999999999999999999999999864211 111110 00
Q ss_pred ----------------chhhh-----h----------hcC---C------------hhHH---hhh-----cc------c
Q 013069 222 ----------------DRDES-----I----------VAL---P------------VDEL---IEK-----AD------G 241 (450)
Q Consensus 222 ----------------~~~~~-----~----------~~~---~------------~~~~---~~~-----~~------v 241 (450)
..... . ... . ..++ +.. .. .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 00000 0 000 0 0000 000 00 0
Q ss_pred eeecChh--hHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCE--EecCCCchHHHHHH
Q 013069 242 FAGVFPE--HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI--VLTEPGLNVIITAV 313 (450)
Q Consensus 242 ~a~~~P~--~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDi--vl~~~~l~~i~~~I 313 (450)
+.+++|. .|+.-++.|.+. | ..|+++|||.||.+||+.|+.||||+|+.+.+|++||+ |+.+++-+++..+|
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 1233343 588888888665 2 45999999999999999999999999999999999986 77788899999888
Q ss_pred H
Q 013069 314 L 314 (450)
Q Consensus 314 ~ 314 (450)
+
T Consensus 259 ~ 259 (272)
T PRK15126 259 T 259 (272)
T ss_pred H
Confidence 6
No 43
>PRK10976 putative hydrolase; Provisional
Probab=99.13 E-value=4.5e-10 Score=109.19 Aligned_cols=66 Identities=18% Similarity=0.241 Sum_probs=57.7
Q ss_pred hHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccC--EEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD--IVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaD--ivl~~~~l~~i~~~I~ 314 (450)
+|...++.+.+. | ..|+++||+.||.+||+.|+.|+||+||.+.+|+.|| .|+.+++-+++.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 588877777654 2 4599999999999999999999999999999999988 7888888999998886
No 44
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.09 E-value=5e-10 Score=105.87 Aligned_cols=146 Identities=23% Similarity=0.286 Sum_probs=101.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccc-cCCc--------hhhh-----------
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-SGQD--------RDES----------- 226 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~l-~~~~--------~~~~----------- 226 (450)
.+.+.+.++|+++++.|+.+++.||++...+..+.+.+|+....+ +...+ .... ....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 377889999999999999999999999999999999999653211 11111 0000 0000
Q ss_pred -hh----c-------------CC---hhHHhhhcc---------ceeecCh--hhHHHHHHHHhhc-C---CEEEEecCC
Q 013069 227 -IV----A-------------LP---VDELIEKAD---------GFAGVFP--EHKYEIVKHLQAR-N---HICGMIGNG 270 (450)
Q Consensus 227 -~~----~-------------~~---~~~~~~~~~---------v~a~~~P--~~K~~iV~~lq~~-g---~~v~~iGDG 270 (450)
.. . .+ ...+.+... .+..+.| .+|...++.+.+. | ..|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 0 00 001111111 1223333 3688888887654 2 459999999
Q ss_pred CCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchH----HHHHHH
Q 013069 271 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV----IITAVL 314 (450)
Q Consensus 271 ~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~----i~~~I~ 314 (450)
.||.+|++.|++|+||+|+.+.+++.||+|..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998888888 665554
No 45
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.07 E-value=6e-10 Score=100.88 Aligned_cols=104 Identities=18% Similarity=0.251 Sum_probs=82.5
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecC--hhhHHHH
Q 013069 176 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF--PEHKYEI 253 (450)
Q Consensus 176 ~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~--P~~K~~i 253 (450)
..|+.|++.|+++.++|+.+...+....+.+|+.. .|.... |+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------------~f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------------FHEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------------EEecCCCCHHHHHHH
Confidence 46999999999999999999999999999999951 222222 2233334
Q ss_pred HHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHH
Q 013069 254 VKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVI 309 (450)
Q Consensus 254 V~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i 309 (450)
++.+.-....|+++||+.||.+|++.|+++++|+++.+.++..|++|+..++-.++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 44443334569999999999999999999999999999999999999876665543
No 46
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.06 E-value=8e-10 Score=104.15 Aligned_cols=129 Identities=21% Similarity=0.266 Sum_probs=93.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee-cCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG-VFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~-~~P 247 (450)
++++++.+.|+.|++.|++++++||.....+..+.+.+|+..- +...+..... .+. ..+... ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~---~~~----------~~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVEDG---KLT----------GLVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEECC---EEE----------EEecCcccCC
Confidence 5899999999999999999999999999999999999998631 1100000000 000 000001 123
Q ss_pred hhHHHHHHHHhhcC----CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHH
Q 013069 248 EHKYEIVKHLQARN----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 312 (450)
Q Consensus 248 ~~K~~iV~~lq~~g----~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 312 (450)
..|..+++.+.++. ..|+++||+.||.+|++.|+++++++ +.+.++++||+++.++++..+..+
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 34777777665442 35999999999999999999999985 567888999999999998887654
No 47
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.03 E-value=1.2e-09 Score=97.71 Aligned_cols=118 Identities=25% Similarity=0.300 Sum_probs=89.3
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhh
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 238 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (450)
++++.+.+.|. .+|+.|++.|+++.++||+....+..+.+.+|+..
T Consensus 24 ~~~~~~~~~~~------~~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------- 69 (154)
T TIGR01670 24 EEIKAFNVRDG------YGIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------- 69 (154)
T ss_pred cEEEEEechhH------HHHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------
Confidence 44555444433 28999999999999999999999999999999852
Q ss_pred ccceeecChhhHHHHHHHHhh----cCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchH-HHHHH
Q 013069 239 ADGFAGVFPEHKYEIVKHLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV-IITAV 313 (450)
Q Consensus 239 ~~v~a~~~P~~K~~iV~~lq~----~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~-i~~~I 313 (450)
.|... ..|.+.++.+.+ ....|+|+||+.||.+|++.|++++++.++.+..+..+|+++..+.-.+ +.+++
T Consensus 70 --~~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 70 --LYQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred --EEecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 12211 234555544433 3456999999999999999999999999998999999999998776444 44444
Q ss_pred H
Q 013069 314 L 314 (450)
Q Consensus 314 ~ 314 (450)
+
T Consensus 146 ~ 146 (154)
T TIGR01670 146 E 146 (154)
T ss_pred H
Confidence 3
No 48
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.03 E-value=1.4e-09 Score=103.46 Aligned_cols=146 Identities=19% Similarity=0.237 Sum_probs=102.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccc-cC------------------------
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-SG------------------------ 220 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~l-~~------------------------ 220 (450)
..+.+.+.++|+++++.|+++++.||+....+..+...+++....+ ++..+ ..
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 4477999999999999999999999999999999999999863111 11111 00
Q ss_pred ----------------Cc-hhhh-------------------hhcCC------------hh----HHhhhc---------
Q 013069 221 ----------------QD-RDES-------------------IVALP------------VD----ELIEKA--------- 239 (450)
Q Consensus 221 ----------------~~-~~~~-------------------~~~~~------------~~----~~~~~~--------- 239 (450)
.. .... ..... .. .+-+..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 00 0000 00000 00 000010
Q ss_pred -cceeecCh--hhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHH
Q 013069 240 -DGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 312 (450)
Q Consensus 240 -~v~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 312 (450)
..+-.++| ..|+..++.|.+. ...++++||+.||.+||+.|+.|+||+++++.++..||+++...+-.+|+++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 01223344 4699988888753 3579999999999999999999999999999999999999998887998876
Q ss_pred H
Q 013069 313 V 313 (450)
Q Consensus 313 I 313 (450)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 5
No 49
>PLN02887 hydrolase family protein
Probab=99.03 E-value=2.2e-09 Score=114.46 Aligned_cols=66 Identities=24% Similarity=0.338 Sum_probs=57.8
Q ss_pred hHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+|+.-++.|.+. | ..|+++|||.||.+||+.|++||||+||.+.+|+.||+|+.+++-++|..+|.
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 466666666554 2 35999999999999999999999999999999999999999999999998886
No 50
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.02 E-value=2.7e-09 Score=103.77 Aligned_cols=66 Identities=23% Similarity=0.333 Sum_probs=57.5
Q ss_pred hHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+.++..||+|+.+++-.+|..+|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 577767666543 2 35999999999999999999999999999999999999999999999998886
No 51
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.93 E-value=3.7e-09 Score=99.40 Aligned_cols=119 Identities=20% Similarity=0.198 Sum_probs=86.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcccee-ecC
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVF 246 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a-~~~ 246 (450)
.+++|++.+.++.++++|.+|+++||-...-+..+++++|+....-+.......... -.+.. .+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~lt--------------G~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLT--------------GRVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEe--------------ceeeeeecC
Confidence 568999999999999999999999999999999999999997432211111100000 01222 344
Q ss_pred hhhHHHHHHHHhhc-CC---EEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEe
Q 013069 247 PEHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVL 301 (450)
Q Consensus 247 P~~K~~iV~~lq~~-g~---~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl 301 (450)
.+.|...++.+.+. |. .+.++|||.||.|||+.|+.+|++. +.+..+..|+...
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n-~~~~l~~~a~~~~ 199 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN-PKPKLRALADVRI 199 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC-cCHHHHHHHHHhc
Confidence 57898888776654 43 5999999999999999999999995 3444555555444
No 52
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.91 E-value=2.6e-09 Score=86.71 Aligned_cols=64 Identities=30% Similarity=0.383 Sum_probs=53.3
Q ss_pred CCChHHHHHHHhhcCc------hhhhhcccEEEEeccCCCCceEEEEEEccCCeEEEEEcCCHHHHHhhhc
Q 013069 51 NLDVIDAAIVGMLADP------KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH 115 (450)
Q Consensus 51 ~~~pi~~ai~~~~~~~------~~~~~~~~~l~~~pF~~~~kr~svi~~~~~g~~~~~~KGa~~~i~~~~~ 115 (450)
..+|.|.||+.++... ...+..+++++.+||+|.+|||+++++ .++.+++++|||||.|+++|+
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcC
Confidence 3468999999887543 345678999999999999999999998 334567799999999999996
No 53
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.90 E-value=1.3e-08 Score=98.58 Aligned_cols=66 Identities=18% Similarity=0.207 Sum_probs=55.1
Q ss_pred hHHHHHHHHhhc------CCEEEEecCCCCChHhHhhCCeeEEeccch---HHHhhc--c-CEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR------NHICGMIGNGVNDAPALKKADIGIAVADAT---DAARSA--A-DIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~------g~~v~~iGDG~ND~~al~~AdvGIa~~~~~---~~a~~a--a-Divl~~~~l~~i~~~I~ 314 (450)
.|...++.+.+. ...|+++||+.||.+||+.|++||||+|+. +.+++. | ++|..+++-++|.++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 577777666543 456999999999999999999999999987 478876 4 58888999999998886
No 54
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.89 E-value=8.2e-09 Score=99.78 Aligned_cols=65 Identities=23% Similarity=0.292 Sum_probs=57.5
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
+|...++.+.+. ...++++||+.||.+|++.|++|++|+++.+.++..||+++.+++-.+|..+|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 588888888765 24599999999999999999999999999999999999999998888887653
No 55
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.88 E-value=5.8e-09 Score=90.79 Aligned_cols=114 Identities=24% Similarity=0.395 Sum_probs=93.2
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHH
Q 013069 177 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 256 (450)
Q Consensus 177 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 256 (450)
.|+.|.++|+++.++||++...+..-++.+||. .+|-. -++|....+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~------------------------------~~~qG--~~dK~~a~~~ 90 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK------------------------------HLYQG--ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc------------------------------eeeec--hHhHHHHHHH
Confidence 499999999999999999999999999999995 22322 3567777766
Q ss_pred Hhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCc----hHHHHHHHHHHHHHHH
Q 013069 257 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL----NVIITAVLISRAIFQR 322 (450)
Q Consensus 257 lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l----~~i~~~I~~~R~~~~~ 322 (450)
|..+ ...|+++||..||.|+|+.+++++|+.++.+..++.||+|+...+- ..+.++|..++..++-
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 6554 3459999999999999999999999999999999999999987663 4456666666655443
No 56
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.86 E-value=1.4e-08 Score=93.33 Aligned_cols=111 Identities=24% Similarity=0.325 Sum_probs=85.4
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHH
Q 013069 176 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 255 (450)
Q Consensus 176 ~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~ 255 (450)
.+|+.|++.|+++.++||.....+..+++.+|+.. +|. ..+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~------------------------------~f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH------------------------------LYQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce------------------------------eec--CCCcHHHHHH
Confidence 68999999999999999999999999999999851 122 1234555555
Q ss_pred HHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCc----hHHHHHHHHHHH
Q 013069 256 HLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL----NVIITAVLISRA 318 (450)
Q Consensus 256 ~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l----~~i~~~I~~~R~ 318 (450)
.+.+. ...|+||||+.||.+|++.|+++++++++.+..+..+|+++..++- ..+.+.|...|.
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~ 173 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQG 173 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcC
Confidence 54332 3469999999999999999999999988888889999999975443 344445544443
No 57
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.76 E-value=5.4e-08 Score=95.06 Aligned_cols=67 Identities=21% Similarity=0.165 Sum_probs=54.2
Q ss_pred hhHHHHHHHHhh-------cCCEEEEecCCCCChHhHhhCCeeEEeccch-H--H---HhhccCEEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQA-------RNHICGMIGNGVNDAPALKKADIGIAVADAT-D--A---ARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~-------~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~-~--~---a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.+|+..++.|.+ ....|+++||+.||.+||+.|++||||+++. + . .+..+|+++...+-+++.++++
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 358777777654 3356999999999999999999999999544 2 1 3457899999999999998887
No 58
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.74 E-value=7.6e-08 Score=89.61 Aligned_cols=128 Identities=20% Similarity=0.230 Sum_probs=89.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++. +++.++|+.....+..+.+.+|+.....+......... + ..+....|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~---i------------~~~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM---I------------TGYDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe---E------------ECccccccc
Confidence 3689999999999999 99999999999999999999998521100000000000 0 000112467
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCE-EecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI-VLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDi-vl~~~~l~~i~~~I~ 314 (450)
.|..+++.++..+..++|+|||.||.+|.+.|++|+.++.........++. ++ +++..+...+.
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 888899988888899999999999999999999999886543333444554 43 34665555444
No 59
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.72 E-value=1.2e-07 Score=92.64 Aligned_cols=66 Identities=24% Similarity=0.327 Sum_probs=55.5
Q ss_pred hHHHHHHHHhh----cC-CEEEEecCCCCChHhHhhCCeeEEeccchHHHh----hcc-CEEe--cCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQA----RN-HICGMIGNGVNDAPALKKADIGIAVADATDAAR----SAA-DIVL--TEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~----~g-~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~----~aa-Divl--~~~~l~~i~~~I~ 314 (450)
.|...++.+.+ .. ..|+++||+.||.+|++.|++|++|+||.+.++ .+| +.+. ..++-.++.++|.
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 67777766654 35 789999999999999999999999999999999 666 6777 5677889988886
No 60
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.72 E-value=5.9e-08 Score=89.77 Aligned_cols=117 Identities=25% Similarity=0.335 Sum_probs=82.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++++++.+.|+.|++.|+++.++|+-....+..+.+.+|+.. .+...+...... .. .-..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g--~~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKG--FI----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCC--eE----------ecceeeEEccc
Confidence 479999999999999999999999999999999999999752 111111110000 00 00112224456
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccC
Q 013069 249 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 298 (450)
Q Consensus 249 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaD 298 (450)
.|..+++.+.+. ...++|+||+.||.+|++.||++++++......+.++|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 787777766543 34599999999999999999999999765555666655
No 61
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.60 E-value=8.6e-08 Score=86.31 Aligned_cols=108 Identities=19% Similarity=0.228 Sum_probs=77.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc-cCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL-SGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
+-|++++.++.|++.|.+|+++||.-...+..++.+|||+........+ .+.... .. ..... -.-+...
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk-~~-gfd~~--------~ptsdsg 158 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK-YL-GFDTN--------EPTSDSG 158 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc-cc-ccccC--------CccccCC
Confidence 5699999999999999999999999999999999999998632211111 111000 00 00000 0112234
Q ss_pred hHHHHHHHHhhc--CCEEEEecCCCCChHhHhhCCeeEEec
Q 013069 249 HKYEIVKHLQAR--NHICGMIGNGVNDAPALKKADIGIAVA 287 (450)
Q Consensus 249 ~K~~iV~~lq~~--g~~v~~iGDG~ND~~al~~AdvGIa~~ 287 (450)
-|.+++..+++. ...++|||||+||.+|+..|+.=|+.+
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 699999999874 456999999999999999988777765
No 62
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.58 E-value=4.7e-07 Score=85.27 Aligned_cols=140 Identities=13% Similarity=0.017 Sum_probs=87.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCC-ccccCCchhhhhhcCChhHHhhhccceeecC
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-SALSGQDRDESIVALPVDELIEKADGFAGVF 246 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 246 (450)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.....+.. ..+.+..... ..+..+.. .+....
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~---~~p~~~~~----~~~~~c 141 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI---DWPHPCDG----TCQNQC 141 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE---eCCCCCcc----ccccCC
Confidence 358999999999999999999999999999999988887543222211 1111111100 00000000 000011
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
...|..+++.++.....|+|+|||.||.+|++.||+.++-+.-.+-.++.---...=++|..|...+.
T Consensus 142 g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 142 GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 34799999998888888999999999999999999977754211111111111122255777766654
No 63
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.45 E-value=3.2e-07 Score=84.08 Aligned_cols=91 Identities=23% Similarity=0.276 Sum_probs=68.4
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC-CCccccCCchhhhhhcCChhHHhhhccceeecChh-h
Q 013069 172 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY-PSSALSGQDRDESIVALPVDELIEKADGFAGVFPE-H 249 (450)
Q Consensus 172 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~-~ 249 (450)
+++.+.|+.+++.|++++|+||+....+..+++.+|++.... .... .... ......+++|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~-~~~~---------------~~~~~~~~~~~~~ 155 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL-FDNG---------------GGIFTGRITGSNC 155 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE-ECTT---------------CCEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee-eecc---------------cceeeeeECCCCC
Confidence 788899999999999999999999999999999999974211 1111 1000 01123444444 3
Q ss_pred --HHHHHHHH------hhcCCEEEEecCCCCChHhHh
Q 013069 250 --KYEIVKHL------QARNHICGMIGNGVNDAPALK 278 (450)
Q Consensus 250 --K~~iV~~l------q~~g~~v~~iGDG~ND~~al~ 278 (450)
|...++.+ +.....++++|||.||.+|||
T Consensus 156 ~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 156 GGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp SHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999986
No 64
>PLN02954 phosphoserine phosphatase
Probab=98.41 E-value=2.6e-06 Score=80.45 Aligned_cols=130 Identities=22% Similarity=0.304 Sum_probs=82.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC-CCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++|++.++++.|++.|+++.++||.....+..+.+.+|+.. +.+...+....+. ...... .......+.
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g--~~~g~~--------~~~~~~~~~ 154 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG--EYAGFD--------ENEPTSRSG 154 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC--cEECcc--------CCCcccCCc
Confidence 78999999999999999999999999999999999999963 1111100000000 000000 000001123
Q ss_pred hHHHHHHHHhhc--CCEEEEecCCCCChHhHhh--CCeeEEeccc--hHHHhhccCEEecCCCchHHHH
Q 013069 249 HKYEIVKHLQAR--NHICGMIGNGVNDAPALKK--ADIGIAVADA--TDAARSAADIVLTEPGLNVIIT 311 (450)
Q Consensus 249 ~K~~iV~~lq~~--g~~v~~iGDG~ND~~al~~--AdvGIa~~~~--~~~a~~aaDivl~~~~l~~i~~ 311 (450)
.|...++.+.+. ...++|+||+.||..|.+. ++++++.+.. .+.....+|+++.+ +..+..
T Consensus 155 ~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~ 221 (224)
T PLN02954 155 GKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIE 221 (224)
T ss_pred cHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHH
Confidence 477777776654 3569999999999999887 4555655532 23345568998854 555544
No 65
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.36 E-value=2.1e-06 Score=81.04 Aligned_cols=110 Identities=16% Similarity=0.092 Sum_probs=74.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC-C-CccccCCchhhhhhcCChhHHhhhccceeecC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY-P-SSALSGQDRDESIVALPVDELIEKADGFAGVF 246 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~-~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 246 (450)
+++|++.+.++.|++.|+++.++||-....+..+.+.+ +....+ . ...+.+...... .+.... .-+....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~---kp~p~~----~~~~~~~ 145 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITIT---WPHPCD----EHCQNHC 145 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEe---ccCCcc----ccccccC
Confidence 58999999999999999999999999999999999888 643111 0 111111110000 000000 0000000
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
...|..+++.++.....|+|+|||.||.+|.+.||+.++-
T Consensus 146 ~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 146 GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 1348889998887777899999999999999999997773
No 66
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.35 E-value=2e-06 Score=82.93 Aligned_cols=147 Identities=17% Similarity=0.126 Sum_probs=98.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC--C--CCccc-cCC--chhhh--------------
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM--Y--PSSAL-SGQ--DRDES-------------- 226 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~--~--~~~~l-~~~--~~~~~-------------- 226 (450)
.+..+.+.++|+++++.|+.++++||+....+..+.+++++..+. + ++..+ .+. ..+..
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456688999999999999999999999999999999988876431 1 11111 110 00000
Q ss_pred ---hh---cC--------------------C----h---hHHhhhc--cc--------eeecCh--hhHHHHHHHHhhc-
Q 013069 227 ---IV---AL--------------------P----V---DELIEKA--DG--------FAGVFP--EHKYEIVKHLQAR- 260 (450)
Q Consensus 227 ---~~---~~--------------------~----~---~~~~~~~--~v--------~a~~~P--~~K~~iV~~lq~~- 260 (450)
.. .. . . .+.+... .+ +-.+.| ..|...++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 00 00 0 0 0011110 01 112333 4688888888664
Q ss_pred ---CCEEEEecCCCCChHhHhh-CCeeEEeccchHHHhhccC-------EEecCCCchHHHHHHH
Q 013069 261 ---NHICGMIGNGVNDAPALKK-ADIGIAVADATDAARSAAD-------IVLTEPGLNVIITAVL 314 (450)
Q Consensus 261 ---g~~v~~iGDG~ND~~al~~-AdvGIa~~~~~~~a~~aaD-------ivl~~~~l~~i~~~I~ 314 (450)
...|+++||+.||.+|++. ++.|++|+|+.+..++.++ ++....+-+++.+++.
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3569999999999999998 7799999999999987543 6666667788888876
No 67
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.33 E-value=2.2e-06 Score=78.26 Aligned_cols=113 Identities=16% Similarity=0.078 Sum_probs=75.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee-cCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG-VFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~-~~P 247 (450)
++++++.+.++.|++.|+++.++|+........+.+..|+.... ..++........ .. ...-....+..+.. ...
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~-~g-~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIYSNPASFDN-DG-RHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEeccCceECC-CC-cEEEecCCCCccCcCCCC
Confidence 68999999999999999999999999999999999998885321 011111000000 00 00000001111111 122
Q ss_pred hhHHHHHHHHhhc-CCEEEEecCCCCChHhHhhCCeeEE
Q 013069 248 EHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 248 ~~K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
..|..+++.++.. ...++++|||.||..|.+.||+-.|
T Consensus 148 ~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 148 CCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 3589999999887 8899999999999999999987654
No 68
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.32 E-value=1.2e-06 Score=79.37 Aligned_cols=99 Identities=19% Similarity=0.250 Sum_probs=69.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc-ccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA-LSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
+++++.+.++.+++.|++++++||.....+..+++.+|+.. .+.... ..... .+... ...-....+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~~~~~g---~~~g~--------~~~~~~~~~~ 141 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLEFDDNG---LLTGP--------IEGQVNPEGE 141 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEEECCCC---EEeCc--------cCCcccCCcc
Confidence 68999999999999999999999999999999999999862 111110 00000 00000 0000124467
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCChHhHhhC
Q 013069 249 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKA 280 (450)
Q Consensus 249 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~A 280 (450)
.|..+++.+.+. ...++++|||.||.+|++.|
T Consensus 142 ~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 142 CKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred hHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 899999887654 34599999999999999875
No 69
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.30 E-value=2.1e-06 Score=79.65 Aligned_cols=108 Identities=16% Similarity=0.139 Sum_probs=76.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccce-eecC
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVF 246 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~-a~~~ 246 (450)
.++++++.+.|+.+++.|++++++||.....+..+++.+|+.. .+...+....+. .... .+. ..+.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~g--~~~g----------~~~~~~~~ 152 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESEDG--IYTG----------NIDGNNCK 152 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCCC--EEeC----------CccCCCCC
Confidence 3579999999999999999999999999999999999999853 111111100000 0000 000 1234
Q ss_pred hhhHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEecc
Q 013069 247 PEHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVAD 288 (450)
Q Consensus 247 P~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~ 288 (450)
++.|...++.+.+. + ..+.++||+.+|.+|++.|+.++++..
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 57788877766543 3 368999999999999999999998863
No 70
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.20 E-value=1.4e-05 Score=75.35 Aligned_cols=126 Identities=16% Similarity=0.198 Sum_probs=87.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecC-
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF- 246 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~- 246 (450)
.++.+++.+.++.|++.|+++.++||........+.+.+|+.... ..++.+. -+....
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~-------------------~~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGD-------------------SLPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCC-------------------CCCCCCc
Confidence 357899999999999999999999999999999999999985211 0111100 011112
Q ss_pred -hhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe-eEEecc----chHHHhhccCEEecCCCchHHHHHHHHH
Q 013069 247 -PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAVLIS 316 (450)
Q Consensus 247 -P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~----~~~~a~~aaDivl~~~~l~~i~~~I~~~ 316 (450)
|+--..+++.++.....++++||+.||+.+.+.|++ +|.+.. ..+.....+++++ +++..+..++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 222234555555556779999999999999999999 555542 2333445678877 5688887777643
No 71
>PLN02382 probable sucrose-phosphatase
Probab=98.16 E-value=1.1e-05 Score=83.43 Aligned_cols=71 Identities=24% Similarity=0.244 Sum_probs=56.1
Q ss_pred ecChh--hHHHHHHHHhhc----C---CEEEEecCCCCChHhHhhCC-eeEEeccchHHHhhcc--------CEEec-CC
Q 013069 244 GVFPE--HKYEIVKHLQAR----N---HICGMIGNGVNDAPALKKAD-IGIAVADATDAARSAA--------DIVLT-EP 304 (450)
Q Consensus 244 ~~~P~--~K~~iV~~lq~~----g---~~v~~iGDG~ND~~al~~Ad-vGIa~~~~~~~a~~aa--------Divl~-~~ 304 (450)
++.|. .|...++.|.+. | ..|+++||+.||.+||+.++ .||+|+|+.+..++.+ +++.. ++
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~ 247 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATER 247 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCC
Confidence 44454 599988888665 2 36999999999999999999 6999999999998743 55533 55
Q ss_pred CchHHHHHHH
Q 013069 305 GLNVIITAVL 314 (450)
Q Consensus 305 ~l~~i~~~I~ 314 (450)
+-++|.++|.
T Consensus 248 ~~~GI~~al~ 257 (413)
T PLN02382 248 CAAGIIQAIG 257 (413)
T ss_pred CccHHHHHHH
Confidence 6778888886
No 72
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.15 E-value=3.2e-06 Score=80.72 Aligned_cols=68 Identities=16% Similarity=0.173 Sum_probs=59.3
Q ss_pred hhHHHHHHHHhhc-C---CEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccC----EEecCCCchHHHHHHHH
Q 013069 248 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD----IVLTEPGLNVIITAVLI 315 (450)
Q Consensus 248 ~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaD----ivl~~~~l~~i~~~I~~ 315 (450)
..|...++.+.++ | ..|+++||+.||.+|++.+++||+|+|+.+.++..|| +|...++-.++.++|.+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 3688888888764 2 3589999999999999999999999999999999999 88888888899988863
No 73
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.10 E-value=2.4e-05 Score=73.94 Aligned_cols=126 Identities=19% Similarity=0.221 Sum_probs=90.2
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecC
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 246 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 246 (450)
...+-+++++++..|+++|++..++|++....+..+.+..|+..-. ..+.|.+. .....-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~----------------~~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDD----------------VPPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCC----------------CCCCCcC
Confidence 3457899999999999999999999999999999999999986321 01111000 0112234
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCC---eeEEecc--chHHHhhccCEEecCCCchHHHHHH
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD---IGIAVAD--ATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Ad---vGIa~~~--~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
|.....+++.+......++||||..+|+.|=+.|+ ||+..|. ........+|+++.+ +..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 55556666666655457999999999999999999 5666663 445666678999854 66655544
No 74
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.03 E-value=1.9e-05 Score=67.16 Aligned_cols=118 Identities=14% Similarity=0.071 Sum_probs=73.8
Q ss_pred cCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee
Q 013069 165 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 244 (450)
Q Consensus 165 ~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~ 244 (450)
....++.+++.+.++.|++.|++++++||.....+....+.+|+... ...++........... ...........+..
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPK-EGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhccc-ccccccccccccCC
Confidence 34458899999999999999999999999999999999999987311 0111110000000000 00000000011223
Q ss_pred cChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhh-CCeeEE
Q 013069 245 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKK-ADIGIA 285 (450)
Q Consensus 245 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~-AdvGIa 285 (450)
-.|+.+..+.+.+......++++||+.+|+.|++. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 34555556666666556789999999999999998 444443
No 75
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.01 E-value=3.5e-05 Score=71.75 Aligned_cols=124 Identities=16% Similarity=0.200 Sum_probs=82.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++.|+++.++|+.....+....+.+|+..-. . .++...+ .....-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-~-~i~~~~~-----------------~~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-D-HVIGSDE-----------------VPRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-e-eEEecCc-----------------CCCCCCChH
Confidence 57899999999999999999999999999888888888885210 0 0000000 001112232
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE-e--c--cchHHHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-V--A--DATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-~--~--~~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
-=..+++.++-....|+||||+.+|+.+-+.+++... + | ...+.....+|+++.+ +..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHHh
Confidence 2234455555456679999999999999999999743 2 2 2233456678988744 55555443
No 76
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.00 E-value=2.3e-05 Score=74.46 Aligned_cols=44 Identities=14% Similarity=0.140 Sum_probs=38.9
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 210 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 210 (450)
.+..-+.+.++|++|++.|+.++++||+....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34555679999999999999999999999999999999999853
No 77
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.99 E-value=3.8e-05 Score=72.37 Aligned_cols=39 Identities=21% Similarity=0.216 Sum_probs=35.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013069 171 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 171 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 209 (450)
-+.++++|+.|++.|++++++||+....+..+.+.+|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999986
No 78
>PRK08238 hypothetical protein; Validated
Probab=97.89 E-value=6.5e-05 Score=79.03 Aligned_cols=98 Identities=16% Similarity=0.188 Sum_probs=73.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
|+++++.+.|+++++.|++++++|+-+...+..+++.+|+.+.. + +.+. ..++.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~V-----i-gsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDGV-----F-ASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCEE-----E-eCCC------------------ccccCCc
Confidence 47899999999999999999999999999999999999973211 1 1100 1235566
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATD 291 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~ 291 (450)
.|.+.+...... +.+.++||+.+|.++++.|+-+++++.+..
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~ 169 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPG 169 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHH
Confidence 676655432222 226789999999999999999999985443
No 79
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.87 E-value=2.6e-05 Score=75.98 Aligned_cols=140 Identities=9% Similarity=0.125 Sum_probs=85.6
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccc---CC--------ch-hh-------hh-
Q 013069 169 PPIHDSAETIRRALS-LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALS---GQ--------DR-DE-------SI- 227 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~-~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~---~~--------~~-~~-------~~- 227 (450)
.+-+++.++|++|++ .|+.++++||+....+..+.+.+++.-...++..+. +. +. .. ..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 455789999999997 799999999999999988887666421000100000 00 00 00 00
Q ss_pred ------------------hcCC--------h-hHHhhhcc--------ceeecCh--hhHHHHHHHHhhc----CCEEEE
Q 013069 228 ------------------VALP--------V-DELIEKAD--------GFAGVFP--EHKYEIVKHLQAR----NHICGM 266 (450)
Q Consensus 228 ------------------~~~~--------~-~~~~~~~~--------v~a~~~P--~~K~~iV~~lq~~----g~~v~~ 266 (450)
...+ + ..+.+... .+.++.| .+|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0000 0 00111111 1223344 3788888876654 356999
Q ss_pred ecCCCCChHhHhhC----CeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 267 IGNGVNDAPALKKA----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 267 iGDG~ND~~al~~A----dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+||+.||.+||+.+ +.||+||++. ..|++.+.+ ...+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~--~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAG--VPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCC--HHHHHHHHH
Confidence 99999999999999 9999999875 456777754 555544443
No 80
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.84 E-value=0.00011 Score=68.94 Aligned_cols=123 Identities=17% Similarity=0.161 Sum_probs=81.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.+++.++++.|++.|+++.++|+.....+..+.+.+|+..-. ..++...+. ....-.|+-
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~p~~ 143 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDV-----------------EHAKPDPEP 143 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcC-----------------CCCCCCcHH
Confidence 6799999999999999999999999999999999999985311 011110000 001122332
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE---ecc-chH-HHhhccCEEecCCCchHHHHHH
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA---VAD-ATD-AARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa---~~~-~~~-~a~~aaDivl~~~~l~~i~~~I 313 (450)
-..+++.+......++||||+.+|+.|-+.|++-.. -+. ..+ .....+|+++. ++..+...+
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 334455554445679999999999999999998533 231 222 23456888764 577666654
No 81
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.80 E-value=0.0002 Score=69.82 Aligned_cols=42 Identities=7% Similarity=0.018 Sum_probs=38.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 210 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 210 (450)
..-+.+.++|++|++.|+.|++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 355678999999999999999999999999999999999864
No 82
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.79 E-value=0.00014 Score=71.12 Aligned_cols=125 Identities=14% Similarity=0.164 Sum_probs=80.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
.++.+++.++|+.|++.|+++.++|+.....+..+....|+.... ..++.+.+. ....-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~-----------------~~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTL-----------------PQKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCC-----------------CCCCCCc
Confidence 367899999999999999999999999998888888888874210 001100000 0001111
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEecc----chHHHhhccCEEecCCCchHHHHHH
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD----ATDAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~----~~~~a~~aaDivl~~~~l~~i~~~I 313 (450)
+-=..+++.+.-....|+||||+.||+.+.+.|++. +++.. ..+.....+|+++. ++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 111233333333456799999999999999999974 44432 22334457888884 466665443
No 83
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.75 E-value=0.00014 Score=67.77 Aligned_cols=121 Identities=15% Similarity=0.156 Sum_probs=78.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+. ....-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSL-----------------AQRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCC-----------------CCCCCChH
Confidence 47899999999999999999999999999999999999985211 011110000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec---cc--hHHHhhccCEEecCCCchHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA---DA--TDAARSAADIVLTEPGLNVII 310 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~---~~--~~~a~~aaDivl~~~~l~~i~ 310 (450)
-=..+.+.+......+++|||+.+|+.+.+.|++....- .. .......+|+++.+ +..+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~ 210 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELP 210 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHH
Confidence 123344444444566999999999999999999875532 11 12223467887743 55444
No 84
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.66 E-value=0.00057 Score=66.58 Aligned_cols=128 Identities=12% Similarity=0.073 Sum_probs=83.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC----------CCccccCCchhhhhhcCChhHHhh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY----------PSSALSGQDRDESIVALPVDELIE 237 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~----------~~~~l~~~~~~~~~~~~~~~~~~~ 237 (450)
-+++|++.+.++.|++.|+++.++||-....+..+.+++|+..... ...++.|...
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~-------------- 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKG-------------- 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCC--------------
Confidence 4589999999999999999999999999999999999999852211 0011111000
Q ss_pred hccceeecChhhHHHHHHH-----Hh--hcCCEEEEecCCCCChHhHhhC---CeeEEec--cc-----hHHHhhccCEE
Q 013069 238 KADGFAGVFPEHKYEIVKH-----LQ--ARNHICGMIGNGVNDAPALKKA---DIGIAVA--DA-----TDAARSAADIV 300 (450)
Q Consensus 238 ~~~v~a~~~P~~K~~iV~~-----lq--~~g~~v~~iGDG~ND~~al~~A---dvGIa~~--~~-----~~~a~~aaDiv 300 (450)
--+....|.+.+.. +. .....|+++|||.||+.|..-. .--+.+| |. -+.-.++-|||
T Consensus 186 -----P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 186 -----PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred -----CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 00111345554432 22 2345799999999999996644 2234444 32 23345678999
Q ss_pred ecCCCchHHHHHHH
Q 013069 301 LTEPGLNVIITAVL 314 (450)
Q Consensus 301 l~~~~l~~i~~~I~ 314 (450)
+.++.--.++..|.
T Consensus 261 l~~D~t~~v~~~il 274 (277)
T TIGR01544 261 LVQDETLEVANSIL 274 (277)
T ss_pred EECCCCchHHHHHH
Confidence 99887666665554
No 85
>PRK11590 hypothetical protein; Provisional
Probab=97.66 E-value=0.00026 Score=66.42 Aligned_cols=103 Identities=13% Similarity=0.028 Sum_probs=73.9
Q ss_pred CCcchHHHH-HHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC--CCCCCCccccCCchhhhhhcCChhHHhhhccc-eeec
Q 013069 170 PIHDSAETI-RRALSLGLGVKMITGDQLAIAKETGRRLGMG--TNMYPSSALSGQDRDESIVALPVDELIEKADG-FAGV 245 (450)
Q Consensus 170 lr~~~~~~I-~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v-~a~~ 245 (450)
+.|++.+.| +.+++.|++++++|+-....+..+++.+|+. .+.+ +...+... ...+ -..|
T Consensus 96 ~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i------~t~l~~~~----------tg~~~g~~c 159 (211)
T PRK11590 96 AFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI------ASQMQRRY----------GGWVLTLRC 159 (211)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE------EEEEEEEE----------ccEECCccC
Confidence 589999999 5788899999999999999999999999962 1111 11110000 0000 1235
Q ss_pred ChhhHHHHHHHH-hhcCCEEEEecCCCCChHhHhhCCeeEEecc
Q 013069 246 FPEHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVAD 288 (450)
Q Consensus 246 ~P~~K~~iV~~l-q~~g~~v~~iGDG~ND~~al~~AdvGIa~~~ 288 (450)
..+.|..-++.. ......+.+-||+.||.|||+.|+.+++++.
T Consensus 160 ~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 160 LGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred CChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 678888777654 3345567789999999999999999999963
No 86
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.64 E-value=0.00017 Score=68.08 Aligned_cols=120 Identities=17% Similarity=0.223 Sum_probs=75.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++|+.|++.|+++.++|+........+.+.+|+..-. ..++.+.+. ....-.|+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 152 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKL-----------------PYSKPHPE 152 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccC-----------------CCCCCCHH
Confidence 57899999999999999999999999999999999999885321 011110000 00111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec-cc---hHHHhhccCEEecCCCchHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DA---TDAARSAADIVLTEPGLNVI 309 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~---~~~a~~aaDivl~~~~l~~i 309 (450)
-=..+.+.+.-....|+||||..||+.+-+.|++....- .+ .+.-...+|+++.+ +..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl 215 (222)
T PRK10826 153 VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTEL 215 (222)
T ss_pred HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHH
Confidence 112223333333456999999999999999999876543 21 11222346776643 4444
No 87
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.56 E-value=0.0005 Score=64.61 Aligned_cols=125 Identities=18% Similarity=0.162 Sum_probs=78.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
.++.+|+.+.++.|++.|+++.++|+-....+..+.+.+|+....+-..++...+.. ...-.|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~-----------------~~KP~p 148 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA-----------------AGRPAP 148 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC-----------------CCCCCH
Confidence 368999999999999999999999999999999999999885111111111111100 011122
Q ss_pred hhHHHHHHHHhhc-CCEEEEecCCCCChHhHhhCCeeEE--eccc---hH-HHhhccCEEecCCCchHHHH
Q 013069 248 EHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIA--VADA---TD-AARSAADIVLTEPGLNVIIT 311 (450)
Q Consensus 248 ~~K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~AdvGIa--~~~~---~~-~a~~aaDivl~~~~l~~i~~ 311 (450)
+-=...++.+.-. ...++||||+.+|+.+-+.|++..+ +..+ .. .....+|+++. ++..+..
T Consensus 149 ~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~~~l~~ 217 (220)
T TIGR03351 149 DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SVADLPA 217 (220)
T ss_pred HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CHHHHHH
Confidence 2212333444333 3579999999999999999999863 3221 11 22345677764 3555544
No 88
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.56 E-value=0.00057 Score=72.10 Aligned_cols=176 Identities=20% Similarity=0.234 Sum_probs=117.3
Q ss_pred CCcEEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC-----------CCcc-------
Q 013069 156 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY-----------PSSA------- 217 (450)
Q Consensus 156 ~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~-----------~~~~------- 217 (450)
.+-.|.|++.+.-+.+++....|+.|-++-|+.+..+-.+....+-.|+++||..... |..-
T Consensus 813 sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q 892 (1354)
T KOG4383|consen 813 SGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQ 892 (1354)
T ss_pred ccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChh
Confidence 4568999999999999999999999999999999999999999999999999965211 0000
Q ss_pred ccC-------------------Cchhhh------hhcC------------------------------ChhHHhhhccce
Q 013069 218 LSG-------------------QDRDES------IVAL------------------------------PVDELIEKADGF 242 (450)
Q Consensus 218 l~~-------------------~~~~~~------~~~~------------------------------~~~~~~~~~~v~ 242 (450)
..+ .-.+.. +... +++.+......|
T Consensus 893 ~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LF 972 (1354)
T KOG4383|consen 893 FAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLF 972 (1354)
T ss_pred hhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeec
Confidence 000 000000 0000 011122223368
Q ss_pred eecChhhHHHHHHHHhhcCCEEEEecCCCCCh--HhHhhCCeeEEeccc-------------hHHH-hhccC--------
Q 013069 243 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDA--PALKKADIGIAVADA-------------TDAA-RSAAD-------- 298 (450)
Q Consensus 243 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~--~al~~AdvGIa~~~~-------------~~~a-~~aaD-------- 298 (450)
..++|+.-.++++.+|+.|.+|+.+|...|-. -.+-+||++|++..- +... ..+.|
T Consensus 973 TDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiS 1052 (1354)
T KOG4383|consen 973 TDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQIS 1052 (1354)
T ss_pred cCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeec
Confidence 99999999999999999999999999988764 345789999998521 1110 11122
Q ss_pred ---------EEecCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 013069 299 ---------IVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 331 (450)
Q Consensus 299 ---------ivl~~~~l~~i~~~I~~~R~~~~~i~~~~~~~~ 331 (450)
+-+....+-.|..+|.-+|....-+|..++|.+
T Consensus 1053 gqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1053 GQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 111222234567777778877777777666655
No 89
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.52 E-value=0.00049 Score=65.41 Aligned_cols=124 Identities=13% Similarity=0.132 Sum_probs=81.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.+.++.|++.|+++.++|+.....+..+-+.+|+.... ..++.+... ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTL-----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcC-----------------CCCCCCHH
Confidence 47899999999999999999999999998888888888875211 001111000 01122233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE-e--cc--ch-HHHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-V--AD--AT-DAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-~--~~--~~-~~a~~aaDivl~~~~l~~i~~~I 313 (450)
-=..+++.+.-....++||||+.+|+.|-+.|++... + +. .. ......+|+++.+ +..+.+.+
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHHh
Confidence 3344555665556779999999999999999998743 3 21 11 1223468888844 65555444
No 90
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.51 E-value=0.00044 Score=76.87 Aligned_cols=61 Identities=18% Similarity=0.183 Sum_probs=47.4
Q ss_pred hhHHHHHHHHhhc--CCEEEEecCCCCChHhHhhC---CeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQAR--NHICGMIGNGVNDAPALKKA---DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~~--g~~v~~iGDG~ND~~al~~A---dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
.+|...++.+.+. ...|+++||+.||.+||+.+ +.+|+||++ +.+|++.+.++ ..+..++.
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHHH
Confidence 4799999888764 35799999999999999986 688888874 46788888764 44555544
No 91
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.50 E-value=0.00039 Score=64.61 Aligned_cols=39 Identities=28% Similarity=0.342 Sum_probs=35.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 207 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lg 207 (450)
++.+.+.++|++|++.|+.++++||+....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999988754
No 92
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.41 E-value=0.0007 Score=73.09 Aligned_cols=40 Identities=10% Similarity=0.133 Sum_probs=36.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 209 (450)
.-+.+.++|++|+++|+.+++.||+....+..+.+++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3457899999999999999999999999999999999974
No 93
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.41 E-value=0.0015 Score=63.95 Aligned_cols=121 Identities=12% Similarity=0.088 Sum_probs=79.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..... .++.+.. +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEecCC------------------CC--CCHH
Confidence 577999999999999999999999999999999999999853210 0111100 00 0111
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe---ccch--HHHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV---ADAT--DAARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~---~~~~--~~a~~aaDivl~~~~l~~i~~~I 313 (450)
-=..+++.+.-....++||||+.+|+.+-+.|++-... +... +.....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 11122233333345699999999999999999986432 2112 22344689887 4477666654
No 94
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.38 E-value=0.00076 Score=63.37 Aligned_cols=107 Identities=11% Similarity=0.039 Sum_probs=73.4
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIR-RALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~-~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
.++|++.++|+ .+++.|++++++|+-....+..+++..++.... .++ +...+.. .. .. -.-..|.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~---~~i-~t~le~~-~g---g~-----~~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL---NLI-ASQIERG-NG---GW-----VLPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC---cEE-EEEeEEe-CC---ce-----EcCccCCC
Confidence 36899999996 788899999999999999999999886552210 011 1111000 00 00 01134566
Q ss_pred hhHHHHHHHH-hhcCCEEEEecCCCCChHhHhhCCeeEEecc
Q 013069 248 EHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVAD 288 (450)
Q Consensus 248 ~~K~~iV~~l-q~~g~~v~~iGDG~ND~~al~~AdvGIa~~~ 288 (450)
++|..-++.. ......+.+-||+.||.|||+.||.+++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 7888766644 3334556789999999999999999999963
No 95
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.34 E-value=0.00074 Score=65.09 Aligned_cols=68 Identities=19% Similarity=0.186 Sum_probs=48.1
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhCCeeEEeccchHH-----Hhhcc---C-EEecCCCchHHHHHHH
Q 013069 248 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDA-----ARSAA---D-IVLTEPGLNVIITAVL 314 (450)
Q Consensus 248 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~-----a~~aa---D-ivl~~~~l~~i~~~I~ 314 (450)
..|...|+.|+.+ ...|+++||+.||.+||..++-||.++|+.+. ..... . ++...+.-.+|++++.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4699999999876 23588899999999999999999999998877 22222 2 3445556678888876
Q ss_pred H
Q 013069 315 I 315 (450)
Q Consensus 315 ~ 315 (450)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 3
No 96
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.34 E-value=0.0016 Score=62.76 Aligned_cols=118 Identities=12% Similarity=0.146 Sum_probs=78.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++.|+++.++|+-....+...-+.+|+..-. ..++.+.+.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 46889999999999999999999999999999999999985211 1111111000 1122233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE-ec--cchH-HHhhccCEEecCCC
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VA--DATD-AARSAADIVLTEPG 305 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-~~--~~~~-~a~~aaDivl~~~~ 305 (450)
-=..+++.+.-....++||||..+|+.+-+.|++-.. +. ...+ .....+|+++.+..
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~ 229 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYE 229 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccch
Confidence 3344455555455679999999999999999998643 22 2112 22346788886543
No 97
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.33 E-value=0.002 Score=62.68 Aligned_cols=97 Identities=13% Similarity=0.057 Sum_probs=63.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++-|++.++|+.|++.|+++.++||.....+..+-+.+|+..-.. ..++...+. ....-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~~-----------------~~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDDV-----------------PAGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCcC-----------------CCCCCChH
Confidence 467899999999999999999999999988887777777642110 111111000 01111222
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCCCChHhHhhCCee
Q 013069 249 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG 283 (450)
Q Consensus 249 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~AdvG 283 (450)
-=..+++.+.-. ...++||||+.+|+.+-+.|++-
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 223334444332 35699999999999999999974
No 98
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.26 E-value=0.0015 Score=68.69 Aligned_cols=123 Identities=11% Similarity=0.051 Sum_probs=80.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..-. ..++.+.+ +...-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~------------------v~~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQ------------------INSLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCC------------------CCCCCCcH
Confidence 68899999999999999999999999999999999999885211 11111110 00011122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEecc--chHHHhhccCEEecCCCchHHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD--ATDAARSAADIVLTEPGLNVIITAVLI 315 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~--~~~~a~~aaDivl~~~~l~~i~~~I~~ 315 (450)
-=..+++.+ ....+++|||+.+|+.+-+.|++. |++.. ..+.....+|+++. ++..+..++..
T Consensus 390 ~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILST 455 (459)
T ss_pred HHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHHH
Confidence 111222222 235699999999999999999984 44432 22222345788874 47777666544
No 99
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.23 E-value=0.0016 Score=63.35 Aligned_cols=116 Identities=18% Similarity=0.110 Sum_probs=76.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++.|+++.++|+.....+..+-+.+|+..-. ..++.+.+.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 46899999999999999999999999999999999999885211 1111111000 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE-Eec-cchHHHhhccCEEecC
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AVA-DATDAARSAADIVLTE 303 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI-a~~-~~~~~a~~aaDivl~~ 303 (450)
-=...++.+.-....++||||..+|+.+-+.|++-. ++. .........+|+++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 223344445444567999999999999999999854 332 2222223357877654
No 100
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.22 E-value=0.0029 Score=60.91 Aligned_cols=98 Identities=15% Similarity=0.108 Sum_probs=66.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..-.. ..++.+.+. ....-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~-----------------~~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDV-----------------PAGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccC-----------------CCCCCCHH
Confidence 367999999999999999999999999999999888888753211 111111100 01111222
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCCCChHhHhhCCeeE
Q 013069 249 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 249 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
-=...++.+.-. ...|+||||..+|+.+-+.|++..
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 223344444432 456999999999999999999753
No 101
>PRK11587 putative phosphatase; Provisional
Probab=97.14 E-value=0.0026 Score=59.80 Aligned_cols=115 Identities=13% Similarity=0.137 Sum_probs=73.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++.|+++.++|+.....+...-+..|+.. . ..++.+.+. ....-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~--~-~~i~~~~~~-----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA--P-EVFVTAERV-----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC--c-cEEEEHHHh-----------------cCCCCCcH
Confidence 478999999999999999999999988776666666667631 1 111111000 01112232
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEeccch-HHHhhccCEEecC
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT-DAARSAADIVLTE 303 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~~~-~~a~~aaDivl~~ 303 (450)
-=....+.+.-....++||||..+|+.+-+.|++. |++..+. ......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 22334444544567799999999999999999985 5554322 2223456777644
No 102
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.10 E-value=0.001 Score=61.60 Aligned_cols=93 Identities=19% Similarity=0.152 Sum_probs=64.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..-. ..++... ++...-.|
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~------------------~~~~KP~p 164 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWME------------------DCPPKPNP 164 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeec------------------CCCCCcCH
Confidence 446677799999999999999999999999999999999985211 1111100 01112334
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhC
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 280 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~A 280 (450)
+--..+++.+.-....|+||||+.+|+.+-+.|
T Consensus 165 ~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 165 EPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 443455566655566799999999999876654
No 103
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.09 E-value=0.0028 Score=58.96 Aligned_cols=144 Identities=21% Similarity=0.296 Sum_probs=92.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCc-------cccCCchhhhhh------cCChhHHh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSS-------ALSGQDRDESIV------ALPVDELI 236 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~-------~l~~~~~~~~~~------~~~~~~~~ 236 (450)
+-|++.++++.|+..= ..+++|---.+-+..+|..+|++....... .+...+..+.+. ..+-++++
T Consensus 84 lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 5689999999998764 455555566677899999999965322111 111111111111 12223334
Q ss_pred hhcc-ceeecChhhHHHHHHHHh---------------hc---CCEEEEecCCCCChHhHhhCC-ee-EEec-cchHHHh
Q 013069 237 EKAD-GFAGVFPEHKYEIVKHLQ---------------AR---NHICGMIGNGVNDAPALKKAD-IG-IAVA-DATDAAR 294 (450)
Q Consensus 237 ~~~~-v~a~~~P~~K~~iV~~lq---------------~~---g~~v~~iGDG~ND~~al~~Ad-vG-Ia~~-~~~~~a~ 294 (450)
++.+ +|.+..|..-.+|++.++ .. ....+++||++.|+.||+.+. -| +|++ ||.+-|.
T Consensus 163 e~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal 242 (315)
T COG4030 163 EKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYAL 242 (315)
T ss_pred HHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcccc
Confidence 3333 577777765444444443 22 223688999999999999763 23 6665 7778888
Q ss_pred hccCEEecCCCchHHHHHHH
Q 013069 295 SAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 295 ~aaDivl~~~~l~~i~~~I~ 314 (450)
..||+.+.+++...+..+|.
T Consensus 243 ~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 243 KEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccceEEeccchhhhhHHHH
Confidence 88999999999998888887
No 104
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.05 E-value=0.0021 Score=63.52 Aligned_cols=110 Identities=14% Similarity=0.067 Sum_probs=76.7
Q ss_pred cCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee
Q 013069 165 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 244 (450)
Q Consensus 165 ~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~ 244 (450)
...+++.+++.++|+.|++.|++++++||.....+..+.+.+|+....+ ..+.+.+.. ...++. ..-.+
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~~--------~~~~~~-~~~~k 251 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPPD--------MHFQRE-QGDKR 251 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcch--------hhhccc-CCCCC
Confidence 3577899999999999999999999999999999999999998853111 111111100 000000 00123
Q ss_pred cChhhHHHHHHHHhh-cCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 245 VFPEHKYEIVKHLQA-RNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 245 ~~P~~K~~iV~~lq~-~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
-.|+-+...++.+.. ....++||||..+|+.+-+.|++...
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 346667777776544 34789999999999999999998743
No 105
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.02 E-value=0.0013 Score=62.82 Aligned_cols=88 Identities=19% Similarity=0.200 Sum_probs=60.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCC----cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeec
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGD----QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 245 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD----~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~ 245 (450)
+.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+... . ..++.++... ..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-f-~~i~~~d~~~-------------------~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-N-PVIFAGDKPG-------------------QY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-e-eEEECCCCCC-------------------CC
Confidence 4556999999999999999999998 66789999999999631 1 1111111100 00
Q ss_pred ChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee
Q 013069 246 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 283 (450)
Q Consensus 246 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG 283 (450)
.| +|. ..+++.+ .++|+||..||..+-+.|++-
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 12 232 2344444 489999999999999998875
No 106
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.01 E-value=0.0028 Score=59.37 Aligned_cols=100 Identities=17% Similarity=0.245 Sum_probs=65.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++.|++++++|+-....+....+.+|+..-. ..++.+.+. ....-.|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEEE-----------------GVEKPHPK 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEeccC-----------------CCCCCCHH
Confidence 47899999999999999999999999888888888888874211 001110000 00111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCC-CChHhHhhCCee-EEec
Q 013069 249 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVA 287 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvG-Ia~~ 287 (450)
-=..+.+.+.-....++||||.. +|+.+-+.|++- |.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 22233444443456799999998 999999999975 4444
No 107
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.94 E-value=0.0038 Score=61.48 Aligned_cols=117 Identities=18% Similarity=0.135 Sum_probs=71.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCC-ccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-SALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
++.|++.+.++.|++.|+++.++|+-.......+-+..+... .... .++.+.+. ....-.|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~-----------------~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDV-----------------PKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEecccc-----------------CCCCCCH
Confidence 478999999999999999999999988877776665553210 0000 01100000 0011122
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEec-cc--hHHHhhccCEEecC
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DA--TDAARSAADIVLTE 303 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~--~~~a~~aaDivl~~ 303 (450)
+-=..+++.+.-....++||||+.+|+.+-+.|++....- .+ .......+|+++.+
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 2223344555444567999999999999999999875543 22 11112357887744
No 108
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.93 E-value=0.0022 Score=61.37 Aligned_cols=90 Identities=18% Similarity=0.183 Sum_probs=62.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc----HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 244 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~----~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~ 244 (450)
.|.+++++.|+.+++.|+++.++||+. ..++..+.+.+|++...+-..++.++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~---------------------- 171 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK---------------------- 171 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC----------------------
Confidence 367889999999999999999999964 568888888899952211111111110
Q ss_pred cChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 245 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 245 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
..-.+|...+ ++.+ .++|+||..+|..+-+.|++-.
T Consensus 172 ~~K~~K~~~l---~~~~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 172 PGQYTKTQWL---KKKN-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred CCCCCHHHHH---HhcC-CeEEEcCCHHHHHHHHHcCCcE
Confidence 0113344433 3333 4899999999999999998863
No 109
>PTZ00174 phosphomannomutase; Provisional
Probab=96.85 E-value=0.00086 Score=64.57 Aligned_cols=60 Identities=25% Similarity=0.358 Sum_probs=49.6
Q ss_pred eeecCh--hhHHHHHHHHhhcCCEEEEecC----CCCChHhHhhC-CeeEEeccchHHHhhccCEEe
Q 013069 242 FAGVFP--EHKYEIVKHLQARNHICGMIGN----GVNDAPALKKA-DIGIAVADATDAARSAADIVL 301 (450)
Q Consensus 242 ~a~~~P--~~K~~iV~~lq~~g~~v~~iGD----G~ND~~al~~A-dvGIa~~~~~~~a~~aaDivl 301 (450)
+.++.| .+|+.-++.|.+....|+++|| |.||.+||+.| -.|++++|+.+..+..+.+++
T Consensus 179 ~leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 345555 4799999999888888999999 99999999976 678888899999988776543
No 110
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.85 E-value=0.0042 Score=58.88 Aligned_cols=99 Identities=12% Similarity=0.050 Sum_probs=65.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh-
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP- 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P- 247 (450)
++.+++.+.++.|++.|+++.++|+-....+...-+.+|+..-. ..++.+.+ +....|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeee-------------------CCCCCCC
Confidence 47899999999999999999999998888888777778774210 00110000 001112
Q ss_pred -hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee--EEecc
Q 013069 248 -EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVAD 288 (450)
Q Consensus 248 -~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG--Ia~~~ 288 (450)
+-=..+.+.+.-....++||||..+|+.+-+.|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 111222333433455699999999999999999996 34443
No 111
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.83 E-value=0.024 Score=54.03 Aligned_cols=129 Identities=19% Similarity=0.277 Sum_probs=82.1
Q ss_pred hhHHHHHHHHHHHHHhcchhhhh--hceecCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHH--HhCCCeEEEEcCC
Q 013069 119 KIGRKVNAVINKFAERGLRSLAV--AYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRA--LSLGLGVKMITGD 194 (450)
Q Consensus 119 ~~~~~~~~~~~~~a~~Glr~l~v--A~~~~~~~~~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l--~~~Gi~v~mlTGD 194 (450)
...+.....+..+.++|.+.--+ +.+.+ |+.|+.+++++.+ +..|+.++++|.-
T Consensus 41 ~wt~~m~~vl~~L~~~gvt~~~I~~~l~~i----------------------p~~pgm~~~l~~l~~~~~~~~~~IiSDa 98 (234)
T PF06888_consen 41 GWTEYMDRVLQLLHEQGVTPEDIRDALRSI----------------------PIDPGMKELLRFLAKNQRGFDLIIISDA 98 (234)
T ss_pred chHHHHHHHHHHHHHcCCCHHHHHHHHHcC----------------------CCCccHHHHHHHHHhcCCCceEEEEeCC
Confidence 34555667777788777544333 33333 4788999999999 5689999999999
Q ss_pred cHHHHHHHHHHhCCCCCC---C-CCccccCCchhhhhhcCChhHHhhhccceeecCh-hhHHHHHHHHhhc----C---C
Q 013069 195 QLAIAKETGRRLGMGTNM---Y-PSSALSGQDRDESIVALPVDELIEKADGFAGVFP-EHKYEIVKHLQAR----N---H 262 (450)
Q Consensus 195 ~~~~a~~ia~~lgi~~~~---~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P-~~K~~iV~~lq~~----g---~ 262 (450)
+......+-+.-|+.... + +...+..... +.-.+. ..+.|..+.| -=|..+++.++.. | .
T Consensus 99 Ns~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~---l~v~py-----h~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~ 170 (234)
T PF06888_consen 99 NSFFIETILEHHGLRDCFSEIFTNPACFDADGR---LRVRPY-----HSHGCSLCPPNMCKGKILERLLQEQAQRGVPYD 170 (234)
T ss_pred cHhHHHHHHHhCCCccccceEEeCCceecCCce---EEEeCc-----cCCCCCcCCCccchHHHHHHHHHHHhhcCCCcc
Confidence 999999999999985321 1 1111111100 000000 0022334443 3599999888764 3 6
Q ss_pred EEEEecCCCCCh-HhH
Q 013069 263 ICGMIGNGVNDA-PAL 277 (450)
Q Consensus 263 ~v~~iGDG~ND~-~al 277 (450)
+|.+||||.||. |++
T Consensus 171 rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 171 RVIYIGDGRNDFCPAL 186 (234)
T ss_pred eEEEECCCCCCcCccc
Confidence 899999999996 444
No 112
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.83 E-value=0.0039 Score=57.51 Aligned_cols=96 Identities=17% Similarity=0.179 Sum_probs=65.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+++++|++.|+++.++|+-+......+.+.+|+.... . .++...+ .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f-d-~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF-D-AVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh-h-eeEehhh-------------------cCCCCCC
Confidence 47899999999999999999999999988888888888874211 0 0110000 0011122
Q ss_pred h--HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 249 H--KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 249 ~--K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
. =..+.+.+.-....+++|||+.+|+.+-+.+++-..
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 1 123444444445679999999999999999987643
No 113
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.80 E-value=0.0073 Score=51.91 Aligned_cols=93 Identities=14% Similarity=0.149 Sum_probs=63.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc--------HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQ--------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~--------~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
++.+++.++++.|++.|+++.++|+.. ......+.+.+|+.... ....+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-------------------- 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-------------------- 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC--------------------
Confidence 578999999999999999999999998 77778888888874110 00000
Q ss_pred ceeecChhhHHHHHHHHh-hcCCEEEEecC-CCCChHhHhhCCeeE
Q 013069 241 GFAGVFPEHKYEIVKHLQ-ARNHICGMIGN-GVNDAPALKKADIGI 284 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq-~~g~~v~~iGD-G~ND~~al~~AdvGI 284 (450)
.+..-.|+-=..+++.++ -....++|||| ..+|+.+-+.+++-.
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 001111222234445552 44567999999 599999999988753
No 114
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.77 E-value=0.0033 Score=56.68 Aligned_cols=110 Identities=15% Similarity=0.060 Sum_probs=74.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccc--eeecC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG--FAGVF 246 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v--~a~~~ 246 (450)
.++|+.++.++.++..++.++++|+.-......+-..++=....+...++..+..-+ .+.. ...+ .....
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih------~dg~--h~i~~~~ds~f 144 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIH------IDGQ--HSIKYTDDSQF 144 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEc------CCCc--eeeecCCcccc
Confidence 378999999999999999999999998888888887776211111111111110000 0000 0000 11223
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
-.+|...|+.+.+....+.|+|||+.|.+|-+.+|+=+|-
T Consensus 145 G~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 145 GHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 4579999999999999999999999999998888876653
No 115
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.77 E-value=0.0014 Score=58.13 Aligned_cols=97 Identities=19% Similarity=0.224 Sum_probs=67.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.+.++.|++.|++++++|+..........+.+|+..- ...++...+. ....-.|+
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~-----------------~~~Kp~~~ 137 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDV-----------------GSRKPDPD 137 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGS-----------------SSSTTSHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchh-----------------hhhhhHHH
Confidence 4789999999999999999999999999999999999988511 1111111000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
-=..+++.+.-....+++|||+..|+.+-+.||+.-
T Consensus 138 ~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 138 AYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 223455555555677999999999999999998753
No 116
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.72 E-value=0.011 Score=53.85 Aligned_cols=127 Identities=20% Similarity=0.141 Sum_probs=69.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhH
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 234 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~---------------~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (450)
+.+++.+++++|++.|+++.++|.... .....+.+.+|+.- ...........+.
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f---~~i~~~~~~~~~~-------- 98 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL---DGIYYCPHHPEDG-------- 98 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc---ceEEECCCCCCCC--------
Confidence 679999999999999999999998762 11112223344410 0000000000000
Q ss_pred HhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE-eccch--H-HHhhcc--CEEecCCCchH
Q 013069 235 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VADAT--D-AARSAA--DIVLTEPGLNV 308 (450)
Q Consensus 235 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-~~~~~--~-~a~~aa--Divl~~~~l~~ 308 (450)
.....-.|+--..+++.+.-....++||||+.+|+.+-+.|++..- +..+. . .....+ |+++. ++..
T Consensus 99 -----~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~--~l~e 171 (181)
T PRK08942 99 -----CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLD--SLAD 171 (181)
T ss_pred -----CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeec--CHHH
Confidence 0011222333344555555556779999999999999999997532 22221 1 112234 77763 3666
Q ss_pred HHHHHH
Q 013069 309 IITAVL 314 (450)
Q Consensus 309 i~~~I~ 314 (450)
+...+.
T Consensus 172 l~~~l~ 177 (181)
T PRK08942 172 LPQALK 177 (181)
T ss_pred HHHHHH
Confidence 655443
No 117
>PRK06769 hypothetical protein; Validated
Probab=96.67 E-value=0.0032 Score=57.25 Aligned_cols=99 Identities=9% Similarity=0.022 Sum_probs=59.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH--------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccc
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLA--------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG 241 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~--------~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v 241 (450)
+.|++++++++|++.|+++.++|+.... ......+..|+..-. ......+.+. .
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIY-LCPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEE-ECcCCCCCCC-----------------C
Confidence 6799999999999999999999987631 122223344543100 0000000000 0
Q ss_pred eeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 242 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 242 ~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
...-.|+-=..+++.+......++||||..+|+.+-+.|++-...
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 111222222445555544456799999999999999999986553
No 118
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.60 E-value=0.011 Score=60.38 Aligned_cols=117 Identities=15% Similarity=0.110 Sum_probs=77.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
-++.+|+.++++.|++.|+++.++|+.....+..+-+.+||..-. ..++.+.+. ....-.|
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv-----------------~~~KP~P 275 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDV-----------------YRGKPDP 275 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcC-----------------CCCCCCH
Confidence 357899999999999999999999999999999999999985210 011111000 0011122
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe-ccchHHH-hhccCEEecC
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-ADATDAA-RSAADIVLTE 303 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~-~~~~~~a-~~aaDivl~~ 303 (450)
+-=...++.+.-....|+||||..+|+.|-+.|++-... ..+.+.. ...+|+++.+
T Consensus 276 eifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s 333 (381)
T PLN02575 276 EMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRR 333 (381)
T ss_pred HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECC
Confidence 222345555555567899999999999999999986443 2322222 2357877644
No 119
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.51 E-value=0.0094 Score=53.75 Aligned_cols=95 Identities=15% Similarity=0.158 Sum_probs=61.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++.|++++++|+-.... ..+..++|+.... ..++.+.+ .....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~-----------------~~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGD-----------------VGRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCC-----------------CCCCCCCHH
Confidence 478999999999999999999999988877 5555557774210 00110000 001111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 283 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG 283 (450)
-=..+.+.+......+++|||...|+.+-+.+++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 22344444544567899999999999999998874
No 120
>PLN02580 trehalose-phosphatase
Probab=96.49 E-value=0.018 Score=58.71 Aligned_cols=68 Identities=24% Similarity=0.230 Sum_probs=47.9
Q ss_pred eecChh---hHHHHHHHHhhc-C-----C-EEEEecCCCCChHhHhh-----CCeeEEeccchHHHhhccCEEecCCCch
Q 013069 243 AGVFPE---HKYEIVKHLQAR-N-----H-ICGMIGNGVNDAPALKK-----ADIGIAVADATDAARSAADIVLTEPGLN 307 (450)
Q Consensus 243 a~~~P~---~K~~iV~~lq~~-g-----~-~v~~iGDG~ND~~al~~-----AdvGIa~~~~~~~a~~aaDivl~~~~l~ 307 (450)
-++.|. +|...|+.+.+. + . .++++||+.||..||+. +++||+|+++... -.|++.+.+ -.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~--t~A~y~L~d--p~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKE--SNAFYSLRD--PS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCC--ccceEEcCC--HH
Confidence 355563 899999887654 2 1 25899999999999996 6899999875432 356777744 55
Q ss_pred HHHHHHH
Q 013069 308 VIITAVL 314 (450)
Q Consensus 308 ~i~~~I~ 314 (450)
.+...+.
T Consensus 368 eV~~~L~ 374 (384)
T PLN02580 368 EVMEFLK 374 (384)
T ss_pred HHHHHHH
Confidence 5554443
No 121
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.48 E-value=0.01 Score=55.53 Aligned_cols=120 Identities=11% Similarity=0.085 Sum_probs=73.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|++. +++.++|+-....+..+.+.+|+..-. ..++...+. ....-.|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDA-----------------GIQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCcc-----------------CCCCCCHH
Confidence 4789999999999999 999999999988888888888885311 001000000 00111111
Q ss_pred hHHHHHHHH-hhcCCEEEEecCCC-CChHhHhhCCee-EEec--cchHHHhhccCEEecCCCchHHH
Q 013069 249 HKYEIVKHL-QARNHICGMIGNGV-NDAPALKKADIG-IAVA--DATDAARSAADIVLTEPGLNVII 310 (450)
Q Consensus 249 ~K~~iV~~l-q~~g~~v~~iGDG~-ND~~al~~AdvG-Ia~~--~~~~~a~~aaDivl~~~~l~~i~ 310 (450)
-=...++.+ .-....++||||+. +|+.+-+.+++. |.+. ..++.....+++++. ++..+.
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~ 221 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELY 221 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHH
Confidence 112344444 33345699999998 899999999974 3333 222122234566653 354444
No 122
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.44 E-value=0.0053 Score=55.72 Aligned_cols=95 Identities=12% Similarity=0.064 Sum_probs=58.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++|+.|++.|+++.++|+... +....+.+|+.... ..++.+.+. ....-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEI-----------------KKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhc-----------------CCCCCChH
Confidence 4789999999999999999999997533 34566777764211 000100000 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
-=..+.+.+.-....++||||+.+|+.+-+.|++-.
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 112333333333456999999999999999999853
No 123
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.40 E-value=0.0071 Score=54.86 Aligned_cols=93 Identities=12% Similarity=0.162 Sum_probs=59.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++.|++.|+++.++|+. ..+..+.+.+|+..-. ..++.... .....|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~-------------------~~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE-------------------VKEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh-------------------CCCCCCC
Confidence 58999999999999999999999987 5566777778874210 00000000 0011122
Q ss_pred hH--HHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 249 HK--YEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 249 ~K--~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
.. ..+.+.+......++||||+.+|+.+-+.|++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 11 1223333333456999999999999999998753
No 124
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.37 E-value=0.026 Score=50.48 Aligned_cols=102 Identities=16% Similarity=0.181 Sum_probs=65.6
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHh---C--CCCCCCCCcccc-CCchhhhhhcCChhHHhh
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSSALS-GQDRDESIVALPVDELIE 237 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~---~ia~~l---g--i~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~ 237 (450)
+|.+.+++.++++++++.|++++++||+....+. .....+ | ++. ..++. +....... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g~~~~~~---------~ 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPDRLFAAL---------H 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCCcchhhh---------h
Confidence 4677899999999999999999999999988774 444442 2 321 11111 11000000 0
Q ss_pred hccceeecChh-hHHHHHHHHhh-----cCCEEEEecCCCCChHhHhhCCee
Q 013069 238 KADGFAGVFPE-HKYEIVKHLQA-----RNHICGMIGNGVNDAPALKKADIG 283 (450)
Q Consensus 238 ~~~v~a~~~P~-~K~~iV~~lq~-----~g~~v~~iGDG~ND~~al~~AdvG 283 (450)
. .+. .-.|+ .|...++.+.+ ....++.+|++.+|+.+.++++|.
T Consensus 92 ~-e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 92 R-EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred c-ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 0 111 12233 37777777765 346778899999999999999876
No 125
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.20 E-value=0.025 Score=51.47 Aligned_cols=112 Identities=8% Similarity=-0.044 Sum_probs=71.3
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 237 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD-~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (450)
.......-.-++.+++.++++.|++.|+++.++|+- ....+..+...+|+..... ..++...+.
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd 99 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD 99 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce
Confidence 344555556678999999999999999999999976 8888888888888741000 000000000
Q ss_pred hccceeecChhhH--HHHHHHHhhc------CCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 238 KADGFAGVFPEHK--YEIVKHLQAR------NHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 238 ~~~v~a~~~P~~K--~~iV~~lq~~------g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
. -+.+.-.+..| ..+.+.+.+. ...|+||||...|+.+-+.|++-...
T Consensus 100 ~-iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 100 D-RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred e-eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 0 01111111112 2344544432 35699999999999999999987654
No 126
>PLN02940 riboflavin kinase
Probab=96.20 E-value=0.017 Score=59.39 Aligned_cols=116 Identities=18% Similarity=0.193 Sum_probs=71.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH-HhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR-RLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~-~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
++.+++.+.++.|++.|+++.|+|+.....+..... ..|+..-. ..++.+.+. ....-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 367999999999999999999999998887776554 56663210 001100000 0111122
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE-ecc--chHHHhhccCEEecC
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VAD--ATDAARSAADIVLTE 303 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-~~~--~~~~a~~aaDivl~~ 303 (450)
+-=..+++.+.-....|+||||+.+|+.+-+.|++... +.. ........+|.++.+
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCC
Confidence 22234445554446779999999999999999998743 332 222233456666543
No 127
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.17 E-value=0.014 Score=52.76 Aligned_cols=88 Identities=9% Similarity=0.024 Sum_probs=60.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~-~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
.+-+++.++++.|++.|+++.++|+.+ ...+..+.+.+|+... .+ ...-.|
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~-------~~---------------------~~KP~p 94 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL-------PH---------------------AVKPPG 94 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE-------cC---------------------CCCCCh
Confidence 567899999999999999999999988 5677777777776310 00 011112
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCC-CChHhHhhCCeeE
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGI 284 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvGI 284 (450)
+-=..+++.+......++||||.. .|+.+-+.|++-.
T Consensus 95 ~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 95 CAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred HHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 111223333333345699999998 7999999999853
No 128
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.09 E-value=0.013 Score=51.59 Aligned_cols=99 Identities=16% Similarity=0.172 Sum_probs=59.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 233 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~---------------~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (450)
++.+++.++++.|++.|+++.++|.... ..+..+.+.+|+....+ ........
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~~~--------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGV---LFCPHHPA--------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEE---EECCCCCC---------
Confidence 3689999999999999999999998762 34556667777741000 00000000
Q ss_pred HHhhhccceeecChhhH--HHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 234 ELIEKADGFAGVFPEHK--YEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 234 ~~~~~~~v~a~~~P~~K--~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
.......|+-+ ..+++.+.-....|+||||...|+.+-+.+++-..
T Consensus 95 ------~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 95 ------DNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 00000012211 22333333334669999999999999999887543
No 129
>PRK09449 dUMP phosphatase; Provisional
Probab=96.07 E-value=0.028 Score=52.79 Aligned_cols=123 Identities=12% Similarity=0.096 Sum_probs=72.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.|+ .|+++.++|+.....+...-+.+|+..-. + .++...+. ....-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f-d-~v~~~~~~-----------------~~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF-D-LLVISEQV-----------------GVAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc-C-EEEEECcc-----------------CCCCCCHH
Confidence 36899999999999 68999999998888888877888874210 0 00000000 00111111
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCC-CChHhHhhCCee-EEec-cchH-HHhhccCEEecCCCchHHHHHH
Q 013069 249 HKYEIVKHLQAR-NHICGMIGNGV-NDAPALKKADIG-IAVA-DATD-AARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 249 ~K~~iV~~lq~~-g~~v~~iGDG~-ND~~al~~AdvG-Ia~~-~~~~-~a~~aaDivl~~~~l~~i~~~I 313 (450)
-=..+++.+.-. ...|+||||+. +|+.+-+.|++- |.+. .+.. .....+|+++. ++..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 112334444322 35799999998 799999999985 4443 2211 11124677663 366555543
No 130
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.96 E-value=0.018 Score=51.78 Aligned_cols=98 Identities=12% Similarity=0.054 Sum_probs=58.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc---------------HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQ---------------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 233 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~---------------~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (450)
++-+++.++|++|++.|+++.++|.-. ...+..+...+|+. +.. ++.+....
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~-ii~~~~~~--------- 95 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII---FDD-VLICPHFP--------- 95 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc---eeE-EEECCCCC---------
Confidence 366899999999999999999999752 34555666777774 100 00000000
Q ss_pred HHhhhccceeecChhhHHHHHHHH----hhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 234 ELIEKADGFAGVFPEHKYEIVKHL----QARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 234 ~~~~~~~v~a~~~P~~K~~iV~~l----q~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
..... ...| |..++..+ ......++||||+.+|+.+-+.+++....
T Consensus 96 ----~~~~~-~~KP--~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 96 ----DDNCD-CRKP--KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ----CCCCC-CCCC--CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 00000 0012 22333332 22234599999999999999999987553
No 131
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.94 E-value=0.026 Score=54.84 Aligned_cols=87 Identities=13% Similarity=0.081 Sum_probs=59.2
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcccee
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 243 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~---a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 243 (450)
..++-|++.+.++.|++.|+++.++|+..... +....+..|++..... .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-------------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-------------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-------------------------eEEe
Confidence 44578999999999999999999999987443 3355566787531110 1122
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHh
Q 013069 244 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 278 (450)
Q Consensus 244 ~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~ 278 (450)
+-....|..-.+.+.+...+++++||..+|.....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 21223455566666666778999999999986443
No 132
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.89 E-value=0.015 Score=51.09 Aligned_cols=90 Identities=22% Similarity=0.271 Sum_probs=57.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
..+++.+.++.|++.|+++.++|+-....+....+.. +... . ..++ +.+ ++...-.|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~~i~-~~~-----------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-DLIL-GSD-----------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-cEEE-ecC-----------------CCCCCcCHHH
Confidence 4478999999999999999999999988888777765 3211 0 0011 000 0111112222
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCC
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKAD 281 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Ad 281 (450)
=..+.+.+.-.. .|++|||..+|+.+-+.|+
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 223334443334 7999999999998887764
No 133
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.81 E-value=0.038 Score=50.13 Aligned_cols=27 Identities=15% Similarity=0.278 Sum_probs=24.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQL 196 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~ 196 (450)
+.|++.++|+.|++.|+++.++|.-..
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 568999999999999999999997663
No 134
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=95.70 E-value=0.028 Score=51.89 Aligned_cols=95 Identities=15% Similarity=0.100 Sum_probs=58.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++-|++.++++.|++.|+++.++|+-... .....+.+|+.... . .++...+. .+..-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f-d-~i~~s~~~-----------------~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF-D-FVVTSYEV-----------------GAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc-c-eEEeeccc-----------------CCCCCCHH
Confidence 47799999999999999999999986554 45666777763210 0 00000000 00111121
Q ss_pred hHHHHHHHHhhcCCEEEEecCCC-CChHhHhhCCee
Q 013069 249 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 283 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvG 283 (450)
-=..+++.+.-....++||||+. +|+.+-+.|++-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 11223344433456799999997 899998888764
No 135
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=95.53 E-value=0.03 Score=52.10 Aligned_cols=138 Identities=17% Similarity=0.328 Sum_probs=84.5
Q ss_pred hHHHHHHHHHHHHHhcchhhhhh--ceecCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCC-eEEEEcCCcH
Q 013069 120 IGRKVNAVINKFAERGLRSLAVA--YQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQL 196 (450)
Q Consensus 120 ~~~~~~~~~~~~a~~Glr~l~vA--~~~~~~~~~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi-~v~mlTGD~~ 196 (450)
..+....+..++.++|-|.--+. ++.+ |+-|+..++|+.+++.|- .++++|--|.
T Consensus 55 Wne~M~rv~k~Lheqgv~~~~ik~~~r~i----------------------P~~Pgmv~lik~~ak~g~~eliIVSDaNs 112 (256)
T KOG3120|consen 55 WNELMDRVFKELHEQGVRIAEIKQVLRSI----------------------PIVPGMVRLIKSAAKLGCFELIIVSDANS 112 (256)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHhcC----------------------CCCccHHHHHHHHHhCCCceEEEEecCch
Confidence 34556677888888887765443 3433 478999999999999997 9999999998
Q ss_pred HHHHHHHHHhCCCCC---CC-CCccccCCchhhhhhcCChhHHhhhccceeecChhh--HHHHHHHHhhc-------CCE
Q 013069 197 AIAKETGRRLGMGTN---MY-PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH--KYEIVKHLQAR-------NHI 263 (450)
Q Consensus 197 ~~a~~ia~~lgi~~~---~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~--K~~iV~~lq~~-------g~~ 263 (450)
.....+-+..|+..- ++ +...+..... +.-.+.. ..+- |...|.. |..++..++.. ..+
T Consensus 113 fFIe~~Lea~~~~d~F~~IfTNPa~~da~G~---L~v~pyH----~~hs-C~~CPsNmCKg~Vl~~~~~s~~~~gv~yer 184 (256)
T KOG3120|consen 113 FFIEEILEAAGIHDLFSEIFTNPACVDASGR---LLVRPYH----TQHS-CNLCPSNMCKGLVLDELVASQLKDGVRYER 184 (256)
T ss_pred hHHHHHHHHccHHHHHHHHhcCCcccCCCCc---EEeecCC----CCCc-cCcCchhhhhhHHHHHHHHHHhhcCCceee
Confidence 888888887776320 00 0000000000 0000000 0011 2233443 77777766542 237
Q ss_pred EEEecCCCCCh-HhHhhCCeeEEec
Q 013069 264 CGMIGNGVNDA-PALKKADIGIAVA 287 (450)
Q Consensus 264 v~~iGDG~ND~-~al~~AdvGIa~~ 287 (450)
+.++|||.||. |+++-..--++|-
T Consensus 185 ~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 185 LIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred EEEEcCCCCCcCcchhcccCceecc
Confidence 99999999994 7777666666664
No 136
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.52 E-value=0.02 Score=50.59 Aligned_cols=95 Identities=14% Similarity=-0.031 Sum_probs=63.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++||++.+.++.|+ .++++.+.|.-....+..+.+.+++... +-..++.+.+. ...-|.
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~-------------------~~~KP~ 103 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDEC-------------------VFVKGK 103 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECccc-------------------cccCCe
Confidence 47999999999998 5799999999999999999998887421 10111111100 001121
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
=...++.+......|++|||..+|..+-+.++|-|.
T Consensus 104 -~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 -YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred -EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 011233333445679999999999998877866654
No 137
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.32 E-value=0.039 Score=55.93 Aligned_cols=99 Identities=11% Similarity=0.038 Sum_probs=59.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 232 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD---------------~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~ 232 (450)
-++.|++.++++.|++.|+++.|+|+- ....+..+.+..|+.- ....+......+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f---d~i~i~~~~~sd------- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF---DEVLICPHFPED------- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce---eeEEEeCCcCcc-------
Confidence 357899999999999999999999983 1334555666666631 000000000000
Q ss_pred hHHhhhccceeecChhhHHHHHHHH----hhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 233 DELIEKADGFAGVFPEHKYEIVKHL----QARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 233 ~~~~~~~~v~a~~~P~~K~~iV~~l----q~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
+..++ .| |..++..+ .-....++||||+.+|..+-+.|++....
T Consensus 99 -------~~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~ 146 (354)
T PRK05446 99 -------NCSCR-KP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIR 146 (354)
T ss_pred -------cCCCC-CC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEE
Confidence 00010 12 22333332 22346799999999999999999987543
No 138
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.24 E-value=0.21 Score=47.74 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=38.3
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH--HHHHHhCCC
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK--ETGRRLGMG 209 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~--~ia~~lgi~ 209 (450)
|.+.-...+-|++.++|+.|+++|+++.++|.-...... ...+.+|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 555666778999999999999999999999986654443 456778875
No 139
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=95.23 E-value=0.062 Score=60.66 Aligned_cols=38 Identities=8% Similarity=-0.032 Sum_probs=32.0
Q ss_pred CCCcchHHHHHHH-HhCCCeEEEEcCCcHHHHHHHHHHh
Q 013069 169 PPIHDSAETIRRA-LSLGLGVKMITGDQLAIAKETGRRL 206 (450)
Q Consensus 169 ~lr~~~~~~I~~l-~~~Gi~v~mlTGD~~~~a~~ia~~l 206 (450)
.+.+++.+++++| ++.|+.|+++||+........-..+
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 5667899999997 7889999999999999888776443
No 140
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.20 E-value=0.058 Score=51.05 Aligned_cols=99 Identities=13% Similarity=0.079 Sum_probs=64.6
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC---CCCCCCCCccccCCchhhhhhcCChhHHhhhcccee
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG---MGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 243 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lg---i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 243 (450)
.-++.+++.+++++|++.|+++.++|.........+-+..+ +..- +. ..+. ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f~--------------~~fd-~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------FS--------------GYFD-TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------cc--------------eEEE-eCccc
Confidence 34689999999999999999999999988876666655542 2100 00 0000 00111
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 244 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 244 ~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
.-.|+-=..+++.+.-....++|+||...|+.+-+.|++-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1122222344555554456799999999999999999997554
No 141
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=94.99 E-value=0.078 Score=45.55 Aligned_cols=39 Identities=10% Similarity=0.103 Sum_probs=34.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHhC
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLG 207 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD-~~~~a~~ia~~lg 207 (450)
++.+++.+.++.|++.|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 7777777766666
No 142
>PLN02811 hydrolase
Probab=94.97 E-value=0.082 Score=49.71 Aligned_cols=101 Identities=12% Similarity=0.168 Sum_probs=58.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH-HHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAK-ETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~-~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
++.+++.++|+.|++.|+++.++||-...... ...+..++.. .. ..++.+.+.+ .....-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~f-~~i~~~~~~~---------------~~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-LM-HHVVTGDDPE---------------VKQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-hC-CEEEECChhh---------------ccCCCCCc
Confidence 46899999999999999999999998764332 2222223321 00 0011110000 00001112
Q ss_pred hhHHHHHHHHh---hcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 248 EHKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 248 ~~K~~iV~~lq---~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
+-=...++.+. -....|+||||+..|+.+-+.|++....
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEE
Confidence 11133344443 2346799999999999999999987543
No 143
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.96 E-value=0.13 Score=48.84 Aligned_cols=89 Identities=18% Similarity=0.287 Sum_probs=55.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcccee
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 243 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~---a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 243 (450)
.-|.-+++.++++.|++.|++|+++||+.... ...--++.|++. .....+.+.+.. .
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d~------------------~ 177 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLEDS------------------N 177 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCCC------------------C
Confidence 34788999999999999999999999999755 333334567652 111122110000 0
Q ss_pred ecChhhHHHHHHHHhhcC-CEEEEecCCCCChH
Q 013069 244 GVFPEHKYEIVKHLQARN-HICGMIGNGVNDAP 275 (450)
Q Consensus 244 ~~~P~~K~~iV~~lq~~g-~~v~~iGDG~ND~~ 275 (450)
.....-|...-+.+.+.| .+++.+||..+|..
T Consensus 178 ~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 178 KTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred chHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 000111656665666665 56788999999973
No 144
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.93 E-value=0.24 Score=46.22 Aligned_cols=37 Identities=16% Similarity=0.136 Sum_probs=34.1
Q ss_pred chHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013069 173 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 173 ~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 209 (450)
.+.+.+.+|+++|+.|+.+|.-........-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5678999999999999999999999999999999987
No 145
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=94.93 E-value=0.043 Score=52.66 Aligned_cols=65 Identities=18% Similarity=0.179 Sum_probs=46.8
Q ss_pred cChhhHHHHHHHHhhc----CCEEEEecCCCCChHhHhhC--------CeeEEeccchHHHhhccCEEecCCCchHHHHH
Q 013069 245 VFPEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKA--------DIGIAVADATDAARSAADIVLTEPGLNVIITA 312 (450)
Q Consensus 245 ~~P~~K~~iV~~lq~~----g~~v~~iGDG~ND~~al~~A--------dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 312 (450)
..+.+|...++.+.+. ...++|+||+.||.+|++.+ ..+|+|+.+ ..+..|++++.+ ...+...
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g--~~~~~A~~~~~~--~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG--SKKTVAKFHLTG--PQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC--CcCCCceEeCCC--HHHHHHH
Confidence 3456798888877654 34799999999999999988 578888533 235678888864 5555544
Q ss_pred H
Q 013069 313 V 313 (450)
Q Consensus 313 I 313 (450)
+
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 4
No 146
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.82 E-value=0.11 Score=46.49 Aligned_cols=110 Identities=12% Similarity=0.242 Sum_probs=78.5
Q ss_pred HHHHHHHhcchhhhhhceecCCCCcCCCCCCcEEEEeccCCCC-CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH
Q 013069 127 VINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDP-PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR 205 (450)
Q Consensus 127 ~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~D~-lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~ 205 (450)
..+.+..+|.+.+.+=.++ +++ +..++ .-|++++=+..++.+|+++.++|.-+..-+...++.
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv---~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~ 82 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLV---PWDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK 82 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------cee---cccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh
Confidence 4677888999998875554 333 23322 557888889999999999999999999999999999
Q ss_pred hCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhh---cCCEEEEecCCC-CChHhHhhCC
Q 013069 206 LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQA---RNHICGMIGNGV-NDAPALKKAD 281 (450)
Q Consensus 206 lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~---~g~~v~~iGDG~-ND~~al~~Ad 281 (450)
+|++- ++.-.-|--+ .+-+++++ ....|+||||.. .|+-+=..++
T Consensus 83 l~v~f------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 83 LGVPF------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred cCCce------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 99861 2222233333 34444544 456799999985 7887777666
Q ss_pred ee
Q 013069 282 IG 283 (450)
Q Consensus 282 vG 283 (450)
+-
T Consensus 132 ~~ 133 (175)
T COG2179 132 MR 133 (175)
T ss_pred cE
Confidence 54
No 147
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=94.78 E-value=0.15 Score=59.11 Aligned_cols=128 Identities=15% Similarity=0.144 Sum_probs=80.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
.+.+++.+.++.|+++|+++.++|+-....+....+.+|+...... .++...+. ....-.|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~~-----------------~~~KP~Pe 222 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADAF-----------------ENLKPAPD 222 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECccc-----------------ccCCCCHH
Confidence 3679999999999999999999999999988888888888411111 11111000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCee-EEecc---chHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD---ATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~---~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
-=..+++.+.-....|++|||..+|+.+-+.|++- |++.. ..+.....+|+++.+..--.+..++.
T Consensus 223 ~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~ 292 (1057)
T PLN02919 223 IFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILT 292 (1057)
T ss_pred HHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHh
Confidence 22344455554566799999999999999999984 33332 22333456788875543333444443
No 148
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=94.68 E-value=0.12 Score=46.66 Aligned_cols=94 Identities=6% Similarity=-0.001 Sum_probs=57.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH------------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLA------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 237 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~------------~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (450)
+-+++.++++.|++.|+++.++|..... .+..+.+.+|+.. ..++.+. ..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~-~~------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATH-AG------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecC-CC-------------
Confidence 3489999999999999999999975542 3456677788741 0011000 00
Q ss_pred hccceeecChhhHHHHHHHHh--hcCCEEEEecCCC--------CChHhHhhCCeeE
Q 013069 238 KADGFAGVFPEHKYEIVKHLQ--ARNHICGMIGNGV--------NDAPALKKADIGI 284 (450)
Q Consensus 238 ~~~v~a~~~P~~K~~iV~~lq--~~g~~v~~iGDG~--------ND~~al~~AdvGI 284 (450)
.+..-.|+-=..+++.+. -....++||||.. +|+.+-+.|++-.
T Consensus 105 ---~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 ---LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ---CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 001111111123334443 2335699999986 6999888888654
No 149
>PLN03017 trehalose-phosphatase
Probab=94.17 E-value=0.43 Score=48.44 Aligned_cols=62 Identities=21% Similarity=0.229 Sum_probs=43.4
Q ss_pred hHHHHHHHHhhc-------CCEEEEecCCCCChHhHhhC-----CeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR-------NHICGMIGNGVNDAPALKKA-----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~-------g~~v~~iGDG~ND~~al~~A-----dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+|...|+.|.+. +..++++||...|-.||+.. ++||.+|.... ...|++.|. +.+.+...+.
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L~--dp~eV~~fL~ 356 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSLQ--DPSEVMDFLA 356 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeCC--CHHHHHHHHH
Confidence 899999888753 23689999999999999855 57777774211 246777774 4555555443
No 150
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=93.85 E-value=0.12 Score=48.37 Aligned_cols=97 Identities=12% Similarity=0.171 Sum_probs=61.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.+++.++++.| ++++.++|+.....+...-+..|+.... +..++.+.+. ....-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~-----------------~~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDI-----------------QRWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhc-----------------CCCCCChH
Confidence 3568999999988 5899999999988888877778874211 0001110000 00011122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
-=..+.+.+.-....|+||||..+|+.+=+.|++....
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 22233344433345699999999999999999988754
No 151
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=93.73 E-value=0.12 Score=51.78 Aligned_cols=91 Identities=13% Similarity=0.060 Sum_probs=66.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH----hCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceee
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR----LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 244 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~----lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~ 244 (450)
++.+++.++|+.|++.|+.+.++|.-+...+..+.+. +|+.... .+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 3578999999999999999999999999999998887 6663110 0111
Q ss_pred cChhhHHHHHH----HHhhcCCEEEEecCCCCChHhHhhCCeeEEec
Q 013069 245 VFPEHKYEIVK----HLQARNHICGMIGNGVNDAPALKKADIGIAVA 287 (450)
Q Consensus 245 ~~P~~K~~iV~----~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~ 287 (450)
..+..|...++ .+.-....++||||...|+.+.+.+...+.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 22334444443 33333467999999999999999988876553
No 152
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=93.71 E-value=0.12 Score=47.94 Aligned_cols=96 Identities=10% Similarity=0.007 Sum_probs=55.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHH--HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccc-eeec
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAI--AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG-FAGV 245 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~--a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v-~a~~ 245 (450)
++.|++.++++.|++.|+++.++|...... ........++.... . .++.. ..+ ...-
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-d-~v~~s------------------~~~~~~KP 153 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-D-AVVES------------------CLEGLRKP 153 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-C-EEEEe------------------eecCCCCC
Confidence 578999999999999999999999865432 22222223331100 0 00000 000 0111
Q ss_pred ChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 246 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 246 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
.|+-=..+++.+.-....++||||...|+.+-+.|++-.
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 122112333444434466999999999999999999854
No 153
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=93.35 E-value=0.22 Score=46.01 Aligned_cols=98 Identities=7% Similarity=-0.029 Sum_probs=57.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-hCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~-lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
++.|++.++++.|++.|+++.++|.-+.......... .++.... . .++...+. ....-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f-d-~v~~s~~~-----------------~~~KP~p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA-D-HIYLSQDL-----------------GMRKPEA 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc-C-EEEEeccc-----------------CCCCCCH
Confidence 3689999999999999999999999776544332211 2221100 0 00000000 0001111
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
+-=..+++.+.-....+++|||...|+.+-+.+++-..
T Consensus 145 ~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 145 RIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 11123344444445679999999999999999998643
No 154
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=91.33 E-value=0.37 Score=43.71 Aligned_cols=97 Identities=11% Similarity=0.063 Sum_probs=60.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
+.+++.+++++|+ .+++++|+-....+....+.+|+.... + .++...+.... ..++.-.|+-
T Consensus 85 ~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-d-~i~~~~~~~~~-------------~~~~KP~p~~ 146 (184)
T TIGR01993 85 PDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-D-GIFCFDTANPD-------------YLLPKPSPQA 146 (184)
T ss_pred CCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-C-eEEEeecccCc-------------cCCCCCCHHH
Confidence 6789999999987 478999999988888888999884210 0 01100000000 0000112222
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 250 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
=..+++.+......++||||...|+.+=+.+++..
T Consensus 147 ~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 147 YEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 23444555555677999999999999999888754
No 155
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=91.17 E-value=0.39 Score=45.71 Aligned_cols=89 Identities=22% Similarity=0.212 Sum_probs=54.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeec
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 245 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~---a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~ 245 (450)
++=|++.+.++.+++.|++|+.+||++... ...-.++.|+... ....+.+.... -...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~-----------------~~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDP-----------------SKKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESST-----------------SS--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhcccccccc-----------------cccc
Confidence 456789999999999999999999998642 2233455675421 11111110000 0000
Q ss_pred ChhhHHHHHHHHhhcC-CEEEEecCCCCChHh
Q 013069 246 FPEHKYEIVKHLQARN-HICGMIGNGVNDAPA 276 (450)
Q Consensus 246 ~P~~K~~iV~~lq~~g-~~v~~iGDG~ND~~a 276 (450)
..+-|...-+.+.+.| ++++++||..+|...
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 1223777778888885 567889999999875
No 156
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=90.93 E-value=0.49 Score=42.86 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=58.3
Q ss_pred hHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHH
Q 013069 174 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEI 253 (450)
Q Consensus 174 ~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~i 253 (450)
..++++.|++. +++.++|+.....+....+.+|+..-. ..++...+. ....-.|+-=...
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~p~~~~~~ 151 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDV-----------------QHHKPAPDTFLRC 151 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhc-----------------cCCCCChHHHHHH
Confidence 36889999865 899999999999999999999885211 011110000 0111122222333
Q ss_pred HHHHhhcCCEEEEecCCCCChHhHhhCCeeE
Q 013069 254 VKHLQARNHICGMIGNGVNDAPALKKADIGI 284 (450)
Q Consensus 254 V~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 284 (450)
.+.+......|++|||..+|+.+-+.|++-.
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 4444434456899999999999999998763
No 157
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=90.89 E-value=1.2 Score=40.25 Aligned_cols=107 Identities=16% Similarity=0.153 Sum_probs=76.3
Q ss_pred HHHhcchhhhhhceecCCCCcCCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCe--EEEEcCC-------cHHHHHH
Q 013069 131 FAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLG--VKMITGD-------QLAIAKE 201 (450)
Q Consensus 131 ~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~--v~mlTGD-------~~~~a~~ 201 (450)
+...|.+.+.+=.+. ++ ...=++.+-++..+.+++|++.+.. |+++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 566787777765443 11 1234667889999999999998874 9999886 4788999
Q ss_pred HHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhc-----CCEEEEecCCC-CChH
Q 013069 202 TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGV-NDAP 275 (450)
Q Consensus 202 ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~-----g~~v~~iGDG~-ND~~ 275 (450)
+.+.+|++- -.+..--|.-..++.+.++.. .+.++||||-. .|+-
T Consensus 101 ~~~~lgIpv-----------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-----------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-----------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999851 012334676666788888755 56799999974 7776
Q ss_pred hHhhCC
Q 013069 276 ALKKAD 281 (450)
Q Consensus 276 al~~Ad 281 (450)
|=...+
T Consensus 152 ~gN~~G 157 (168)
T PF09419_consen 152 MGNRMG 157 (168)
T ss_pred HhhccC
Confidence 655555
No 158
>PLN02423 phosphomannomutase
Probab=90.84 E-value=0.36 Score=46.40 Aligned_cols=48 Identities=27% Similarity=0.365 Sum_probs=38.9
Q ss_pred eecCh--hhHHHHHHHHhhcCCEEEEecC----CCCChHhHhh-CCeeEEeccchH
Q 013069 243 AGVFP--EHKYEIVKHLQARNHICGMIGN----GVNDAPALKK-ADIGIAVADATD 291 (450)
Q Consensus 243 a~~~P--~~K~~iV~~lq~~g~~v~~iGD----G~ND~~al~~-AdvGIa~~~~~~ 291 (450)
-++.| .+|+..++.|+ ....|+++|| |.||.+||+. .-.||++.+-.+
T Consensus 181 iDi~~~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 181 FDVFPQGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEeeCCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 34444 37999999999 7788999999 8999999996 778999865433
No 159
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=90.63 E-value=3 Score=44.34 Aligned_cols=98 Identities=15% Similarity=0.065 Sum_probs=61.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-hCCCCCC----C--CCccccCCchhhhhhcCChhHHhhhccce
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNM----Y--PSSALSGQDRDESIVALPVDELIEKADGF 242 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~-lgi~~~~----~--~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ 242 (450)
+++++.+ .+++.|. ++++|+-....+..+|++ +|+..-. . ....++|.-.. -
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g-----------------~ 169 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKK-----------------P 169 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecC-----------------C
Confidence 4555444 4456775 499999999999999987 8986210 0 01111110000 0
Q ss_pred eecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEecc
Q 013069 243 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD 288 (450)
Q Consensus 243 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~ 288 (450)
..+.-++|..-++..........+.||+.||.|||+.|+-+.+++.
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 0134466877776433211223789999999999999999999975
No 160
>PHA02597 30.2 hypothetical protein; Provisional
Probab=90.52 E-value=0.5 Score=43.37 Aligned_cols=92 Identities=11% Similarity=0.077 Sum_probs=53.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC--CCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM--YPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
+.|++.++++.|++.+ +.+++|.-+.......-+.+++..-. +-..+ +.++...
T Consensus 75 ~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i-----------------------~~~~~~~ 130 (197)
T PHA02597 75 AYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEV-----------------------LMCGHDE 130 (197)
T ss_pred CCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEE-----------------------EEeccCc
Confidence 6899999999999875 56677765544443344555553100 00000 1111111
Q ss_pred hhHHHHHHHH-hhc-CCEEEEecCCCCChHhHhhC--CeeEEe
Q 013069 248 EHKYEIVKHL-QAR-NHICGMIGNGVNDAPALKKA--DIGIAV 286 (450)
Q Consensus 248 ~~K~~iV~~l-q~~-g~~v~~iGDG~ND~~al~~A--dvGIa~ 286 (450)
.|.+++... ++. ...++||||..+|+.+-++| |+-...
T Consensus 131 -~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~ 172 (197)
T PHA02597 131 -SKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIH 172 (197)
T ss_pred -ccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEE
Confidence 133433332 222 34688999999999999999 986443
No 161
>PLN02645 phosphoglycolate phosphatase
Probab=90.49 E-value=0.64 Score=46.32 Aligned_cols=48 Identities=25% Similarity=0.304 Sum_probs=38.7
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 209 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia---~~lgi~ 209 (450)
|++.-.+.+=+++.++|++|++.|++++++|+....+...+. +.+|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555555677799999999999999999999999977666666 456663
No 162
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=88.09 E-value=0.38 Score=39.53 Aligned_cols=48 Identities=21% Similarity=0.304 Sum_probs=35.6
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 209 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia---~~lgi~ 209 (450)
|++...+.+=|++.++|+.|++.|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 455557778899999999999999999999998866655554 456664
No 163
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=87.02 E-value=1.9 Score=40.69 Aligned_cols=100 Identities=15% Similarity=0.171 Sum_probs=71.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
.++.+++.+.+++|++.|+.+.+.|+-....+..+...+|+.... ..++.+.+.. -..-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~-----------------~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA-----------------RGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh-----------------cCCCCC
Confidence 368999999999999999999999999999999999999985311 0111110000 012223
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
+-=....+.|.-....|+.|.|..|.+.|-++|+.-+-.
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 333445555555567899999999999999999987544
No 164
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=86.67 E-value=3.6 Score=40.06 Aligned_cols=43 Identities=16% Similarity=0.329 Sum_probs=32.6
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 013069 167 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 209 (450)
Q Consensus 167 ~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia---~~lgi~ 209 (450)
..|.=|++.+..+.+++.|++|+++||+....-..+. ++.|+.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~ 188 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYH 188 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCC
Confidence 4567789999999999999999999999864322222 345664
No 165
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=86.49 E-value=1.9 Score=40.93 Aligned_cols=91 Identities=11% Similarity=0.074 Sum_probs=53.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++-+++.++++.|++. +++.++|..+... +..|+..-. . .++... -+....|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~f-d-~i~~~~-------------------~~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDYF-E-FVLRAG-------------------PHGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHhh-c-eeEecc-------------------cCCcCCCc
Confidence 4668999999999875 8999998866541 445553100 0 000000 00011121
Q ss_pred h--HHHHHHHHhhcCCEEEEecCC-CCChHhHhhCCeeEEe
Q 013069 249 H--KYEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIAV 286 (450)
Q Consensus 249 ~--K~~iV~~lq~~g~~v~~iGDG-~ND~~al~~AdvGIa~ 286 (450)
- =..+++.+.-....++||||. ..|+.+=+.||+-...
T Consensus 166 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 166 SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 1 122233333345679999999 5999999999987554
No 166
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=86.18 E-value=0.39 Score=43.05 Aligned_cols=93 Identities=15% Similarity=0.029 Sum_probs=61.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecCh
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 247 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 247 (450)
=..||++.+.++.|.+. +.+++.|......|..+...++....... .++ +.....
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~-~~l-----------------------~r~~~~ 95 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVIS-RRL-----------------------YRESCV 95 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEe-EEE-----------------------EccccE
Confidence 35899999999999987 99999999999999999999886421110 000 000000
Q ss_pred hhHHHHHHHHh---hcCCEEEEecCCCCChHhHhhCCeeEE
Q 013069 248 EHKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIGIA 285 (450)
Q Consensus 248 ~~K~~iV~~lq---~~g~~v~~iGDG~ND~~al~~AdvGIa 285 (450)
..|..+++.|. .....|+||||...|..+-+.++|-|.
T Consensus 96 ~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 96 FTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred EeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 00111333333 334579999999988876666655543
No 167
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=85.81 E-value=4.5 Score=36.13 Aligned_cols=103 Identities=20% Similarity=0.178 Sum_probs=66.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHh-----CCCCCCCCCccccCCchhhhhhcCChhHHhhhc
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRL-----GMGTNMYPSSALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia---~~l-----gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
|-.++++.+..+.+++.|++++-+|++..--+..+- ... +++. +.++...+.. . .. ..-
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~----Gpv~~sP~~l--~-----~a--l~r 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD----GPVLLSPDSL--F-----SA--LHR 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC----CCEEECCcch--h-----hh--hhc
Confidence 689999999999999999999999999965444332 333 3321 1111110000 0 00 000
Q ss_pred cceeecChhhHHHHHHHHhhc-----CCEEEEecCCCCChHhHhhCCee
Q 013069 240 DGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGVNDAPALKKADIG 283 (450)
Q Consensus 240 ~v~a~~~P~~K~~iV~~lq~~-----g~~v~~iGDG~ND~~al~~AdvG 283 (450)
++..+-.-+.|...++.++.. ...++..|...+|+.+.++++|.
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 122333345688888888764 35688899999999999999876
No 168
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=84.24 E-value=3.9 Score=37.99 Aligned_cols=97 Identities=12% Similarity=0.173 Sum_probs=60.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++-+++.++++.++.. ++++++|--.........+++|+... .+..+..+ -....-|+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~--------------------~~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISE--------------------DVGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEec--------------------ccccCCCC
Confidence 3678899999999988 99999999888888888999996421 11111110 01112233
Q ss_pred hH--HHHHHHHhhcCCEEEEecCC-CCChHhHhhCCee-EEec
Q 013069 249 HK--YEIVKHLQARNHICGMIGNG-VNDAPALKKADIG-IAVA 287 (450)
Q Consensus 249 ~K--~~iV~~lq~~g~~v~~iGDG-~ND~~al~~AdvG-Ia~~ 287 (450)
.+ ..+.+.+.-....++||||. .||+..-+.+|.- |-+.
T Consensus 157 ~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~ 199 (229)
T COG1011 157 PEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWIN 199 (229)
T ss_pred cHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEEC
Confidence 22 23334444445679999997 4885555566553 4443
No 169
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=83.19 E-value=2.2 Score=42.04 Aligned_cols=41 Identities=7% Similarity=-0.016 Sum_probs=37.9
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013069 170 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 210 (450)
Q Consensus 170 lr-~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 210 (450)
+| |++.+++++|++.|+++.++|+-....+...-+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999973
No 170
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=82.61 E-value=6.4 Score=39.81 Aligned_cols=106 Identities=14% Similarity=0.118 Sum_probs=64.7
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh-C-------CCCCCCCCccccCCchh----------------hh
Q 013069 171 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL-G-------MGTNMYPSSALSGQDRD----------------ES 226 (450)
Q Consensus 171 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l-g-------i~~~~~~~~~l~~~~~~----------------~~ 226 (450)
-|++.+.+++|++.|+++.++|+-....+..+.+.+ | +.. .. ..++.+.... ..
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~-yF-D~IIt~a~KP~FF~~~~pf~~v~~~~g~ 263 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRD-YF-DVVIVDARKPGFFTEGRPFRQVDVETGS 263 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHh-hC-cEEEeCCCCCcccCCCCceEEEeCCCCc
Confidence 579999999999999999999999999999998886 6 221 00 1111111100 00
Q ss_pred hhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCC-CChHhHh-hCCe
Q 013069 227 IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGV-NDAPALK-KADI 282 (450)
Q Consensus 227 ~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~-ND~~al~-~Adv 282 (450)
+....... ++...+|+.-+- ..+.+.+...+..|++|||.+ .|+-.-+ .++.
T Consensus 264 ~~~~~~~~-l~~g~vY~gGn~---~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 264 LKWGEVDG-LEPGKVYSGGSL---KQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred ccCCcccc-ccCCCeEeCCCH---HHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCc
Confidence 00000011 233345554433 345566667789999999985 7776555 4543
No 171
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=82.26 E-value=1.9 Score=38.45 Aligned_cols=85 Identities=15% Similarity=0.078 Sum_probs=51.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
++.|++.++++ ++.++|.-+........+.+|+..-. ..++...+. ....-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-----------------~~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDTV-----------------RAYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhhc-----------------CCCCCCHH
Confidence 47889999998 37789998888888888888874210 000100000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCChHhHhh
Q 013069 249 HKYEIVKHLQARNHICGMIGNGVNDAPALKK 279 (450)
Q Consensus 249 ~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~ 279 (450)
-=..+.+.+.-....|+||||+..|+.+-++
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 1134445554455679999999999876554
No 172
>PRK10444 UMP phosphatase; Provisional
Probab=82.00 E-value=1.5 Score=42.23 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=39.5
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 206 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l 206 (450)
|.+.-.+.+-|++.++|+.|++.|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 566666788899999999999999999999999998888887765
No 173
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=81.84 E-value=2.6 Score=40.51 Aligned_cols=48 Identities=8% Similarity=0.016 Sum_probs=38.7
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHhCCC
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 209 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTG---D~~~~a~~ia~~lgi~ 209 (450)
|.+.-.+.+-+++.++|++|++.|++++++|| ..........+.+|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44445566667999999999999999999996 6677777777788875
No 174
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=81.07 E-value=16 Score=35.02 Aligned_cols=132 Identities=18% Similarity=0.209 Sum_probs=69.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCC---chhhhhhcCChhHHhhhccceee
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQ---DRDESIVALPVDELIEKADGFAG 244 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~v~a~ 244 (450)
-.+|+++.+.++.|++.+|.+.|+|+.=-....++-++-|...++ ..++... +.+..+. .|..
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~N--v~VvSN~M~Fd~~g~l~------------gF~~ 154 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPN--VKVVSNFMDFDEDGVLV------------GFKG 154 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTT--EEEEEE-EEE-TTSBEE------------EE-S
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCC--eEEEeeeEEECCcceEe------------ecCC
Confidence 358999999999999999999999998888888888887654221 1111100 0000000 0100
Q ss_pred --cChhhHHH-------HHHHHhhcCCEEEEecCCCCChHhHhhC---CeeEEec--cc-h----HHHhhccCEEecCCC
Q 013069 245 --VFPEHKYE-------IVKHLQARNHICGMIGNGVNDAPALKKA---DIGIAVA--DA-T----DAARSAADIVLTEPG 305 (450)
Q Consensus 245 --~~P~~K~~-------iV~~lq~~g~~v~~iGDG~ND~~al~~A---dvGIa~~--~~-~----~~a~~aaDivl~~~~ 305 (450)
..+-.|-. .-+.++ ....|+-.||..-|+.|-.-. +.-+.+| |. . +.-.++=|||+.++.
T Consensus 155 ~lIH~~NKn~~~l~~~~~~~~~~-~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~ 233 (246)
T PF05822_consen 155 PLIHTFNKNESALEDSPYFKQLK-KRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQ 233 (246)
T ss_dssp S---TT-HHHHHHTTHHHHHCTT-T--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--
T ss_pred CceEEeeCCcccccCchHHHHhc-cCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCC
Confidence 01112221 112222 245689999999999997655 4445555 32 2 233567799999887
Q ss_pred chHHHHHHH
Q 013069 306 LNVIITAVL 314 (450)
Q Consensus 306 l~~i~~~I~ 314 (450)
--.++..|.
T Consensus 234 tm~v~~~il 242 (246)
T PF05822_consen 234 TMDVPNAIL 242 (246)
T ss_dssp B-HHHHHHH
T ss_pred CchHHHHHH
Confidence 555555443
No 175
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=80.56 E-value=6.3 Score=38.45 Aligned_cols=48 Identities=21% Similarity=0.265 Sum_probs=35.3
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHH---HHHHhCCC
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKE---TGRRLGMG 209 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~---ia~~lgi~ 209 (450)
|++.-.+.+-+++.++|++|++.|++++++|+....+... --+.+|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4444456677889999999999999999999976443333 23456764
No 176
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=80.46 E-value=2.1 Score=41.35 Aligned_cols=48 Identities=23% Similarity=0.376 Sum_probs=36.3
Q ss_pred EeccCCCC----CCcchHHHHHHHHhCCCeEEEEcCCcHHHH---HHHHHHhCCC
Q 013069 162 GLIPLFDP----PIHDSAETIRRALSLGLGVKMITGDQLAIA---KETGRRLGMG 209 (450)
Q Consensus 162 G~i~l~D~----lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a---~~ia~~lgi~ 209 (450)
|.+.-.+. +-|++.++|++|++.|++++++||....+. ....+.+|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444455 788999999999999999999999877653 3444556764
No 177
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=80.18 E-value=3.2 Score=40.95 Aligned_cols=40 Identities=3% Similarity=-0.135 Sum_probs=36.5
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013069 170 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 170 lr-~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 209 (450)
+| |++.+++++|+++|+++.++|+.....+....+.+|+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 46 89999999999999999999988888889999999996
No 178
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=78.83 E-value=5.4 Score=38.90 Aligned_cols=109 Identities=17% Similarity=0.173 Sum_probs=69.2
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCC-CCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM-GTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
|++.--+.+=|++.++|+.|+++|++++.+|.....+...++.++.= ..... ..+.
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~-----------------~~~~------ 73 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDV-----------------TPDD------ 73 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCC-----------------CHHH------
Confidence 77888888999999999999999999999999988877755554421 10000 0000
Q ss_pred ceeecChhhHHHHHHHHhhc--CCEEEEecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecC
Q 013069 241 GFAGVFPEHKYEIVKHLQAR--NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 303 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~--g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~ 303 (450)
++..- .-....+++. +..|.++|.+ .+...++.+++-+.-.... ...|+|+..
T Consensus 74 i~TS~-----~at~~~l~~~~~~~kv~viG~~-~l~~~l~~~G~~~~~~~~~----~~~d~Vv~g 128 (269)
T COG0647 74 IVTSG-----DATADYLAKQKPGKKVYVIGEE-GLKEELEGAGFELVDEEEP----ARVDAVVVG 128 (269)
T ss_pred eecHH-----HHHHHHHHhhCCCCEEEEECCc-chHHHHHhCCcEEeccCCC----CcccEEEEe
Confidence 11110 1123344443 3689999954 5678899988877654221 115666654
No 179
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=78.04 E-value=6 Score=42.39 Aligned_cols=40 Identities=15% Similarity=0.172 Sum_probs=32.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH------------HHHHHHHHHhCCC
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQL------------AIAKETGRRLGMG 209 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~------------~~a~~ia~~lgi~ 209 (450)
+-+++.+.|+.|++.|++++|+|.-.. ..+..+.+.+|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999998544 3456667777764
No 180
>PTZ00174 phosphomannomutase; Provisional
Probab=77.38 E-value=3.9 Score=39.10 Aligned_cols=36 Identities=19% Similarity=0.310 Sum_probs=31.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR 204 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~ 204 (450)
++.+.+.++|+++++.|+++++.||++.........
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 478889999999999999999999999986655443
No 181
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=74.74 E-value=3.7 Score=35.29 Aligned_cols=33 Identities=18% Similarity=0.309 Sum_probs=28.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAK 200 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~ 200 (450)
+++.+++.++++++++.|+.++++||++.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 568899999999999999999999999876543
No 182
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=70.76 E-value=8.9 Score=35.78 Aligned_cols=51 Identities=20% Similarity=0.348 Sum_probs=43.0
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH---HhCCC
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR---RLGMG 209 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~---~lgi~ 209 (450)
.+-|.+.++|-.-|++.++++.|++++++|..+|.-..+.-..+.+ +||+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 4679999999999999999999999999999998877766666654 46664
No 183
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=69.59 E-value=48 Score=35.66 Aligned_cols=49 Identities=16% Similarity=-0.094 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--ccccHHHHHHHHH
Q 013069 311 TAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLDTVIAILQ 359 (450)
Q Consensus 311 ~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~~~~~--~~~pl~~~~~l~~ 359 (450)
..-+.-|.+.+|+...+.|++..+.+++++.+.+++ ..+.++++.++++
T Consensus 480 ~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~~~p~~aa~~m~~ss~~v~~n 530 (536)
T TIGR01512 480 LARRTRRIVKQNVVIALGIILLLILLALFGVLPLWLAVLGHEGSTVLVILN 530 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHcChHHHHHHH
Confidence 334455788999999999999999999999998877 5567777776644
No 184
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=67.83 E-value=14 Score=33.58 Aligned_cols=90 Identities=28% Similarity=0.385 Sum_probs=58.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH----HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeec
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLA----IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 245 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~----~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~ 245 (450)
|++-+++.|..-++.|=+++.+||+.+- +++.+++...|. ++.+. .|+.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~-~m~pv-------------------------~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHIT-NMNPV-------------------------IFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccC-CCcce-------------------------eeccC
Confidence 5677788999999999999999999863 455566666663 22211 23333
Q ss_pred Chh-hHHHHHHHHhhcCCEEEEecCCCCChHhHhhCCe-eEEe
Q 013069 246 FPE-HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAV 286 (450)
Q Consensus 246 ~P~-~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIa~ 286 (450)
.|. .+..-...+|..+ +-+.-||+-||+-|-+.|++ ||-+
T Consensus 169 k~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 KPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeE
Confidence 220 1112233444444 44677999999999999886 5554
No 185
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=67.66 E-value=4.5 Score=39.03 Aligned_cols=119 Identities=13% Similarity=0.118 Sum_probs=65.0
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhh-----ccceeecC
Q 013069 172 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK-----ADGFAGVF 246 (450)
Q Consensus 172 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~v~a~~~ 246 (450)
++..++++.|++.|..+.+.|+.........+...|+.. +-..+.. ...+..-.
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~---------------------~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP---------------------FVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH---------------------HHHHHHHHhCCCceeecCCC
Confidence 678889999999999999998866543322222222210 0000000 00112222
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCC-CChHhHhhCCeeEE-eccc--h-H---HHhhccCEEecCCCchHHHHHH
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIA-VADA--T-D---AARSAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIa-~~~~--~-~---~a~~aaDivl~~~~l~~i~~~I 313 (450)
|+-=..+++.+......++||||.. +|+.+-+.+++--. +..+ . . .....+|+++ +++..+...+
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~l 254 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDLI 254 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHHH
Confidence 3222334444444457899999996 99999888887543 3322 1 1 1123467776 3466555443
No 186
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=66.51 E-value=32 Score=31.48 Aligned_cols=98 Identities=15% Similarity=0.220 Sum_probs=54.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCc--hhhhhhcC--ChhHHhhhccceeec
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD--RDESIVAL--PVDELIEKADGFAGV 245 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~--~~~~~~~~--~~~~~~~~~~v~a~~ 245 (450)
+.+++.+++..|+++|++++|+|- +-||.+..++...+.... ....+... .++. -.+|--
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~-----i~~Cph 95 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRGYFTEADFDKLHNKMLKILASQGVKIDG-----ILYCPH 95 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCccccCccHHHHHHHHHHHHHHHHHcCCccce-----EEECCC
Confidence 568999999999999999999996 333332221111110000 00000000 0000 012222
Q ss_pred Chhh--------HHHHHHHHhhcC---CEEEEecCCCCChHhHhhCCee
Q 013069 246 FPEH--------KYEIVKHLQARN---HICGMIGNGVNDAPALKKADIG 283 (450)
Q Consensus 246 ~P~~--------K~~iV~~lq~~g---~~v~~iGDG~ND~~al~~AdvG 283 (450)
.|++ ...+.+.+++.+ ....+|||-..|..+-..+++.
T Consensus 96 ~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 96 HPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 3332 234555555543 6789999999999998888887
No 187
>PTZ00445 p36-lilke protein; Provisional
Probab=64.93 E-value=11 Score=35.29 Aligned_cols=65 Identities=12% Similarity=0.155 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEEEE------------eccCCCCCCcchHHHHHHHHhCCCe
Q 013069 120 IGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIG------------LIPLFDPPIHDSAETIRRALSLGLG 187 (450)
Q Consensus 120 ~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG------------~i~l~D~lr~~~~~~I~~l~~~Gi~ 187 (450)
..+..+..++.+.+.|.+++++=++. ++++ ..-+--.++|+.+.-+++|+++|++
T Consensus 27 ~~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~ 93 (219)
T PTZ00445 27 PHESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIK 93 (219)
T ss_pred HHHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCe
Confidence 34566677888999999998876553 3333 1112223799999999999999999
Q ss_pred EEEEcCCcHH
Q 013069 188 VKMITGDQLA 197 (450)
Q Consensus 188 v~mlTGD~~~ 197 (450)
|.++|=-...
T Consensus 94 v~VVTfSd~~ 103 (219)
T PTZ00445 94 ISVVTFSDKE 103 (219)
T ss_pred EEEEEccchh
Confidence 9999965543
No 188
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=64.91 E-value=31 Score=33.08 Aligned_cols=85 Identities=12% Similarity=0.063 Sum_probs=54.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHH----HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeec
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAI----AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 245 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~----a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~ 245 (450)
+-||+.+.++..-+.|.+|..+|-+..+. ...--++.|++...-+... +-+.
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~l------------------------lkk~ 178 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLL------------------------LKKD 178 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceE------------------------EeeC
Confidence 56899999999999999999999988765 3444556777532211111 1111
Q ss_pred ChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhh
Q 013069 246 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKK 279 (450)
Q Consensus 246 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~ 279 (450)
-..|..--+.++....+|+.|||..+|-.....
T Consensus 179 -~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~~ 211 (274)
T COG2503 179 -KKSKEVRRQAVEKDYKIVMLVGDNLDDFGDNAY 211 (274)
T ss_pred -CCcHHHHHHHHhhccceeeEecCchhhhcchhh
Confidence 111222223333456789999999999765443
No 189
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=63.80 E-value=29 Score=31.39 Aligned_cols=84 Identities=12% Similarity=0.128 Sum_probs=49.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEc-CCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 170 PIHDSAETIRRALSLGLGVKMIT-GDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlT-GD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
+-|+++++++.|+..|+++.+.| -+.+..|+.+-+.+++......... + ...--+.+..|.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~-----------------~-~~~F~~~eI~~g 107 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVP-----------------L-IEYFDYLEIYPG 107 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------------------------CCECEEEESSS
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCcccccccc-----------------c-hhhcchhheecC
Confidence 56899999999999999999999 5789999999999999611000000 0 000113556677
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCC
Q 013069 249 HKYEIVKHLQAR----NHICGMIGNGV 271 (450)
Q Consensus 249 ~K~~iV~~lq~~----g~~v~~iGDG~ 271 (450)
.|..-.+.+++. ...++++=|-.
T Consensus 108 sK~~Hf~~i~~~tgI~y~eMlFFDDe~ 134 (169)
T PF12689_consen 108 SKTTHFRRIHRKTGIPYEEMLFFDDES 134 (169)
T ss_dssp -HHHHHHHHHHHH---GGGEEEEES-H
T ss_pred chHHHHHHHHHhcCCChhHEEEecCch
Confidence 787777777654 22356665543
No 190
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=58.88 E-value=49 Score=32.21 Aligned_cols=50 Identities=20% Similarity=0.026 Sum_probs=37.8
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCC
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGM 208 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~~-Gi~v~mlTGD~~~~a~~ia~~lgi 208 (450)
.-+..-+...++-++..+.++.|... ...++|+||...........-.|+
T Consensus 30 ~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i 80 (266)
T COG1877 30 TEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGI 80 (266)
T ss_pred cccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCc
Confidence 44455566677888999999999876 446999999999888777654444
No 191
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=58.61 E-value=4.5 Score=36.38 Aligned_cols=14 Identities=36% Similarity=0.292 Sum_probs=12.8
Q ss_pred EEeCcccccccCce
Q 013069 7 LCCDKTGTLTLNKL 20 (450)
Q Consensus 7 i~~DKTGTLT~n~m 20 (450)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999994
No 192
>PLN02151 trehalose-phosphatase
Probab=58.31 E-value=21 Score=36.24 Aligned_cols=62 Identities=21% Similarity=0.234 Sum_probs=42.7
Q ss_pred hHHHHHHHHhhc-C------CEEEEecCCCCChHhHhhC-----CeeEEeccchHHHhhccCEEecCCCchHHHHHHH
Q 013069 249 HKYEIVKHLQAR-N------HICGMIGNGVNDAPALKKA-----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 314 (450)
Q Consensus 249 ~K~~iV~~lq~~-g------~~v~~iGDG~ND~~al~~A-----dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~ 314 (450)
+|...|+.+.+. + ..++++||...|-.||+.. ++||.++.+.. ...|++.|.+ ...+...+.
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~d--p~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQE--PDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCCC--HHHHHHHHH
Confidence 899999887654 2 2489999999999999853 67777763221 2367777754 555554443
No 193
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=58.31 E-value=51 Score=29.69 Aligned_cols=107 Identities=20% Similarity=0.180 Sum_probs=66.4
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHH-HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhH
Q 013069 172 HDSAETIRRALSLGLGVKMITGDQLAI-AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHK 250 (450)
Q Consensus 172 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~-a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K 250 (450)
.|...++.+++..|-++.+++=.+... ...+...+|+.- ..+.--++++=
T Consensus 64 ~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i-----------------------------~~~~~~~~~e~ 114 (176)
T PF06506_consen 64 FDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDI-----------------------------KIYPYDSEEEI 114 (176)
T ss_dssp HHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EE-----------------------------EEEEESSHHHH
T ss_pred hHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCce-----------------------------EEEEECCHHHH
Confidence 355666666666666777776655543 566666666631 23445567777
Q ss_pred HHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEeccchHHHh-hccCEEecCCCchHHHHHHHHHHHHHHHHHH
Q 013069 251 YEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR-SAADIVLTEPGLNVIITAVLISRAIFQRMRN 325 (450)
Q Consensus 251 ~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~-~aaDivl~~~~l~~i~~~I~~~R~~~~~i~~ 325 (450)
...++.++..| .-+.+|++. ....|+ .--..++..++..+|..++.+++.+.+.+++
T Consensus 115 ~~~i~~~~~~G-~~viVGg~~-----------------~~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 115 EAAIKQAKAEG-VDVIVGGGV-----------------VCRLARKLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHHTT---EEEESHH-----------------HHHHHHHTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC-CcEEECCHH-----------------HHHHHHHcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 78888888888 445566652 122222 2345678888899999999999998877653
No 194
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=57.69 E-value=31 Score=34.21 Aligned_cols=70 Identities=20% Similarity=0.259 Sum_probs=43.4
Q ss_pred ceeecChhhHHHHHHHHhh--cCCEEEEecCC-CCChH---hHhhCCeeEEecc----chHHHhhccCEEecCCCchHHH
Q 013069 241 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNG-VNDAP---ALKKADIGIAVAD----ATDAARSAADIVLTEPGLNVII 310 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG-~ND~~---al~~AdvGIa~~~----~~~~a~~aaDivl~~~~l~~i~ 310 (450)
.|.-|+|.-=.++++...- .|..|+++|-| .-=.| +|..++..+.+-+ ....+...||+|++.-+-...+
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg~~~~v 216 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGRPRLI 216 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhcc
Confidence 4556677655555555543 38899999997 44443 5667777776642 2233456789998764444433
No 195
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=56.92 E-value=2.6e+02 Score=31.30 Aligned_cols=164 Identities=16% Similarity=0.173 Sum_probs=98.7
Q ss_pred ChhhHHHHHHHHHHHHHhcchhhhhhceecCCCCcCCCCCCcEEEEeccCCCCCCcch-HHHHHHHHhCCCeEEEEcCCc
Q 013069 117 KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS-AETIRRALSLGLGVKMITGDQ 195 (450)
Q Consensus 117 ~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~D~lr~~~-~~~I~~l~~~Gi~v~mlTGD~ 195 (450)
.+.+++.-.+.++.+.++|++++.+.=+.-. .-+.+- .-+|+--+.-.+.|+- .+.|++|++.|.+|.|+ ||-
T Consensus 535 ~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~--~A~~iA---~~lGId~v~AellPedK~~~V~~l~~~g~~VamV-GDG 608 (713)
T COG2217 535 ADELRPDAKEAIAALKALGIKVVMLTGDNRR--TAEAIA---KELGIDEVRAELLPEDKAEIVRELQAEGRKVAMV-GDG 608 (713)
T ss_pred eCCCChhHHHHHHHHHHCCCeEEEEcCCCHH--HHHHHH---HHcChHhheccCCcHHHHHHHHHHHhcCCEEEEE-eCC
Confidence 3556677788899999999997655422100 000000 1255544444555544 67899999999666555 887
Q ss_pred HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChH
Q 013069 196 LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAP 275 (450)
Q Consensus 196 ~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~ 275 (450)
..-|-.+|.. .+=.++|-| .|+
T Consensus 609 INDAPALA~A--------------------------------------------------------dVGiAmG~G-tDv- 630 (713)
T COG2217 609 INDAPALAAA--------------------------------------------------------DVGIAMGSG-TDV- 630 (713)
T ss_pred chhHHHHhhc--------------------------------------------------------CeeEeecCC-cHH-
Confidence 6655555421 122334443 333
Q ss_pred hHhhCCeeEEeccchHHHhhccCEEecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--ccccHHH
Q 013069 276 ALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLDT 353 (450)
Q Consensus 276 al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~~~~~--~~~pl~~ 353 (450)
++..|||-+- .+.-..... .+--.-+.-|.+.+|+-+.+.|++..+..+.++.+++.+ ..+-+++
T Consensus 631 A~eaADvvL~-~~dL~~v~~------------ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g~l~p~~A~~am~~SS 697 (713)
T COG2217 631 AIEAADVVLM-RDDLSAVPE------------AIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGGLLTPWIAALAMSGSS 697 (713)
T ss_pred HHHhCCEEEe-cCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHcccH
Confidence 5777887653 221111111 122223446789999999999999999999998888866 4455666
Q ss_pred HHHH
Q 013069 354 VIAI 357 (450)
Q Consensus 354 ~~~l 357 (450)
+.++
T Consensus 698 v~Vv 701 (713)
T COG2217 698 VLVV 701 (713)
T ss_pred HHHH
Confidence 6555
No 196
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=55.44 E-value=13 Score=35.34 Aligned_cols=92 Identities=15% Similarity=0.145 Sum_probs=50.5
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc----cceeecC
Q 013069 171 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA----DGFAGVF 246 (450)
Q Consensus 171 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~v~a~~~ 246 (450)
-++..++++.+++.|++. ++|......+.......|... +...+... ..+..-.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~---------------------~~~~i~~~g~~~~~~gKP~ 197 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGY---------------------YAELIKQLGGKVIYSGKPY 197 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccH---------------------HHHHHHHhCCcEecCCCCC
Confidence 478889999998899997 677765544433222222210 00000000 0111222
Q ss_pred hhhHHHHHHHHhhc-CCEEEEecCC-CCChHhHhhCCeeE
Q 013069 247 PEHKYEIVKHLQAR-NHICGMIGNG-VNDAPALKKADIGI 284 (450)
Q Consensus 247 P~~K~~iV~~lq~~-g~~v~~iGDG-~ND~~al~~AdvGI 284 (450)
|+-=..+.+.+... ...++||||. .+|+.+=+.|++-.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 22112334444322 3479999999 59999988888754
No 197
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=54.59 E-value=12 Score=31.39 Aligned_cols=40 Identities=25% Similarity=0.356 Sum_probs=30.5
Q ss_pred CCcchHHHHHHHHhCCCe-EEEEcCCcHHHHHHHHHHhCCC
Q 013069 170 PIHDSAETIRRALSLGLG-VKMITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~-v~mlTGD~~~~a~~ia~~lgi~ 209 (450)
+.+.+.+.++++.++|++ +|+.+|...+.+...+++.||.
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 456789999999999996 9999999999999999998873
No 198
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=53.05 E-value=50 Score=32.91 Aligned_cols=48 Identities=21% Similarity=0.248 Sum_probs=38.1
Q ss_pred EeccCCCCCCcchHHHHHHHHhC----CCeEEEEcCCc---HH-HHHHHHHHhCCC
Q 013069 162 GLIPLFDPPIHDSAETIRRALSL----GLGVKMITGDQ---LA-IAKETGRRLGMG 209 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~----Gi~v~mlTGD~---~~-~a~~ia~~lgi~ 209 (450)
|++.-.+++-+++.++++.|+.. |+++..+|-.. .. .+..+.+++|+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 67777888999999999999998 99999998654 33 355556778874
No 199
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=52.42 E-value=1.2e+02 Score=32.72 Aligned_cols=47 Identities=15% Similarity=-0.001 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c--ccccHHHHHHHHH
Q 013069 313 VLISRAIFQRMRNYMVRGIDGLSSTEFIQVLEL-N--FLFTLDTVIAILQ 359 (450)
Q Consensus 313 I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~~~~-~--~~~pl~~~~~l~~ 359 (450)
-+.-+.+.+|+...+.|++..+..++++.+.+. + ..++++++.++++
T Consensus 503 r~~~~~i~~nl~~a~~~N~~~i~~a~~g~~~p~~~aa~~m~~ss~~v~ln 552 (556)
T TIGR01525 503 RKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLWLLAVLLHEGSTVLVVLN 552 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHhchHHHHHHH
Confidence 334577999999999999999999999998884 3 5567777666643
No 200
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=49.57 E-value=30 Score=30.72 Aligned_cols=41 Identities=15% Similarity=0.032 Sum_probs=37.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013069 168 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 168 D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 209 (450)
=.+||++.+.++.|++. +++.+.|.-....|..+.+.++..
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34799999999999855 999999999999999999999875
No 201
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=48.67 E-value=15 Score=34.66 Aligned_cols=56 Identities=25% Similarity=0.362 Sum_probs=28.7
Q ss_pred hHHHHHHHHhhc-C------CEEEEecCCCCChHhHhhC------CeeEEeccch-HHHhhccCEEecCC
Q 013069 249 HKYEIVKHLQAR-N------HICGMIGNGVNDAPALKKA------DIGIAVADAT-DAARSAADIVLTEP 304 (450)
Q Consensus 249 ~K~~iV~~lq~~-g------~~v~~iGDG~ND~~al~~A------dvGIa~~~~~-~~a~~aaDivl~~~ 304 (450)
.|...|+.+-+. + ..++++||...|-.|++.. +++|-++..+ ..-..+|++-+.++
T Consensus 165 ~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 165 NKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp -HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred ChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccccC
Confidence 499999877654 3 3699999999999999863 6677777432 23334566655544
No 202
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=47.91 E-value=41 Score=31.82 Aligned_cols=48 Identities=27% Similarity=0.281 Sum_probs=34.4
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHH-hCCC
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRR-LGMG 209 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlT---GD~~~~a~~ia~~-lgi~ 209 (450)
|++.-.+.+=+++.++|+.+++.|++++++| |...........+ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 4555556667799999999999999999998 5555544433333 6663
No 203
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=46.69 E-value=1e+02 Score=29.95 Aligned_cols=31 Identities=6% Similarity=0.235 Sum_probs=20.5
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCCCChHhH
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGVNDAPAL 277 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al 277 (450)
+++-.++++.+++.-..-+++|-|+|+....
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~ 217 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQI 217 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHHH
Confidence 3445677777777655566789999955433
No 204
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=46.44 E-value=48 Score=31.71 Aligned_cols=69 Identities=17% Similarity=0.210 Sum_probs=46.5
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHH----------HHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 013069 171 IHDSAETIRRALSLGLGVKMITGDQLAIA----------KETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 240 (450)
Q Consensus 171 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a----------~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (450)
++-+++-|+.+++.||.| .||+..... ...|+++|+.. ++-.+
T Consensus 40 ~~~l~eki~la~~~~V~v--~~GGtl~E~~~~q~~~~~Yl~~~k~lGf~~-------------------------IEiS~ 92 (237)
T TIGR03849 40 RDIVKEKIEMYKDYGIKV--YPGGTLFEIAHSKGKFDEYLNECDELGFEA-------------------------VEISD 92 (237)
T ss_pred HHHHHHHHHHHHHcCCeE--eCCccHHHHHHHhhhHHHHHHHHHHcCCCE-------------------------EEEcC
Confidence 345889999999998775 588743221 12455666641 11223
Q ss_pred ceeecChhhHHHHHHHHhhcCCEEEE
Q 013069 241 GFAGVFPEHKYEIVKHLQARNHICGM 266 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~~g~~v~~ 266 (450)
.+-.+++++|.++|+..++.|-.|..
T Consensus 93 G~~~i~~~~~~rlI~~~~~~g~~v~~ 118 (237)
T TIGR03849 93 GSMEISLEERCNLIERAKDNGFMVLS 118 (237)
T ss_pred CccCCCHHHHHHHHHHHHhCCCeEec
Confidence 46677889999999999988876654
No 205
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=43.37 E-value=2e+02 Score=24.19 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=24.6
Q ss_pred HHHHHHHhhcCCEEEEecCCCC--ChHhHhhCCeeEEec
Q 013069 251 YEIVKHLQARNHICGMIGNGVN--DAPALKKADIGIAVA 287 (450)
Q Consensus 251 ~~iV~~lq~~g~~v~~iGDG~N--D~~al~~AdvGIa~~ 287 (450)
.++++.+ ..-..+...|-|.| |..+++.-+|-++-.
T Consensus 52 ~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 52 AEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp HHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred HHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 3556666 33457888899987 678888888888764
No 206
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=42.67 E-value=18 Score=27.50 Aligned_cols=53 Identities=23% Similarity=0.342 Sum_probs=35.1
Q ss_pred HHHHHHHhhcCCEEEEecCC-CCChHhHhhCCeeEEe-cc---chHHH---hhccCEEecC
Q 013069 251 YEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIAV-AD---ATDAA---RSAADIVLTE 303 (450)
Q Consensus 251 ~~iV~~lq~~g~~v~~iGDG-~ND~~al~~AdvGIa~-~~---~~~~a---~~aaDivl~~ 303 (450)
..+.+.+......++||||. ..|+.+=+.+++--.. .. ..+.. ...+|+|+.+
T Consensus 11 ~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 11 EQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp HHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESS
T ss_pred HHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECC
Confidence 34455555445679999999 9999999999886443 32 22222 2577888743
No 207
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=41.68 E-value=39 Score=30.44 Aligned_cols=43 Identities=19% Similarity=0.118 Sum_probs=32.0
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG 203 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia 203 (450)
.++|+-..- --+++..+++.+++.|+.|+-+||.+--....++
T Consensus 112 vLigISTSG--NS~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 112 VLIGISTSG--NSKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred EEEEEeCCC--CCHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 555555444 2478999999999999999999999865444443
No 208
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.11 E-value=1.8e+02 Score=28.67 Aligned_cols=66 Identities=14% Similarity=0.182 Sum_probs=39.0
Q ss_pred ceeecChhhHHHHHHHHhh--cCCEEEEecCCCCC----hHhHhhCCeeEEec--cch--HHHhhccCEEecCCCc
Q 013069 241 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKKADIGIAVA--DAT--DAARSAADIVLTEPGL 306 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~al~~AdvGIa~~--~~~--~~a~~aaDivl~~~~l 306 (450)
.|.-++|.-=.++++...- .|..|..+|-+..= +.||...+.-+.+. ... ...-..|||++..-+-
T Consensus 134 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~ 209 (282)
T PRK14169 134 TVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVAVGV 209 (282)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEccCC
Confidence 4556677665666665543 48899999987422 34555555444443 222 2344678999875443
No 209
>PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds []. Coenzyme M (CoM; 2-mercaptoethanesulphonic acid) serves as the terminal methyl carrier for this process. Previously thought to be unique to methanogenic archaea, CoM has also been found in methylotrophic bacteria. Biosynthesis of CoM begins with the Michael addition of sulphite to phosphoenolpyruvate, forming 2-phospho-3-sulpholactate (PSL). This reaction is catalyzed by members of this family, PSL synthase (ComA) []. Subsequently, PSL is dephosphorylated by phosphosulpholactate phosphatase (ComB) to form 3-sulpholactate [], which is then converted to 3-sulphopyruvate by L-sulpholactate dehydrogenase (ComC; 1.1.1.272 from EC) []. Sulphopyruvate decarboxylase (ComDE; 4.1.1.79 from EC) converts 3-sulphopyruvate to sulphoacetaldehyde []. Reductive thiolation of sulphoacetaldehyde is the final step.; GO: 0019295 coenzyme M biosynthetic process; PDB: 1U83_A 1QWG_A.
Probab=39.98 E-value=51 Score=31.65 Aligned_cols=112 Identities=22% Similarity=0.191 Sum_probs=62.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH----------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLA----------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~----------~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
+++-.++-|+.+++.||.|+ +|.... .-...++++|+.. ++-.
T Consensus 52 ~~~~l~eki~l~~~~gV~v~--~GGtl~E~a~~q~~~~~yl~~~k~lGf~~-------------------------IEiS 104 (244)
T PF02679_consen 52 PEEILKEKIDLAHSHGVYVY--PGGTLFEVAYQQGKFDEYLEECKELGFDA-------------------------IEIS 104 (244)
T ss_dssp TCHHHHHHHHHHHCTT-EEE--E-HHHHHHHHHTT-HHHHHHHHHHCT-SE-------------------------EEE-
T ss_pred CHHHHHHHHHHHHHcCCeEe--CCcHHHHHHHhcChHHHHHHHHHHcCCCE-------------------------EEec
Confidence 45568999999999998754 776543 2334455566531 1111
Q ss_pred cceeecChhhHHHHHHHHhhcCCEEEE-ecCCCCChHhHhhCCeeEEeccchHHHhhccCEEecCCCchHHH
Q 013069 240 DGFAGVFPEHKYEIVKHLQARNHICGM-IGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 310 (450)
Q Consensus 240 ~v~a~~~P~~K~~iV~~lq~~g~~v~~-iGDG~ND~~al~~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~ 310 (450)
+.+-.+++++|.++|+..++.|..|.. +| .-|...-..-++.--+..+......-||.|+.+.+-++..
T Consensus 105 dGti~l~~~~r~~~I~~~~~~Gf~v~~EvG--~K~~~~~~~~~~~~~i~~~~~dLeAGA~~ViiEarEsG~~ 174 (244)
T PF02679_consen 105 DGTIDLPEEERLRLIRKAKEEGFKVLSEVG--KKDPESDFSLDPEELIEQAKRDLEAGADKVIIEARESGKG 174 (244)
T ss_dssp -SSS---HHHHHHHHHHHCCTTSEEEEEES---SSHHHHTT--CCHHHHHHHHHHHHTECEEEE--TTT--S
T ss_pred CCceeCCHHHHHHHHHHHHHCCCEEeeccc--CCCchhcccCCHHHHHHHHHHHHHCCCCEEEEeeeccCCC
Confidence 235577899999999999999977766 77 4444443333333223344455566788998886655433
No 210
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=39.87 E-value=24 Score=33.21 Aligned_cols=35 Identities=23% Similarity=0.285 Sum_probs=30.5
Q ss_pred hHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013069 174 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 174 ~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 209 (450)
..++++ +++.|+.++++||+....+..+...+++.
T Consensus 20 ~~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 20 FVELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred HHHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence 335665 68999999999999999999999999885
No 211
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=39.44 E-value=2.3e+02 Score=27.92 Aligned_cols=67 Identities=22% Similarity=0.273 Sum_probs=38.3
Q ss_pred ceeecChhhHHHHHHHHhh--cCCEEEEecCCCCC----hHhHhhC--CeeEEeccch--HHHhhccCEEecCCCch
Q 013069 241 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKKA--DIGIAVADAT--DAARSAADIVLTEPGLN 307 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~al~~A--dvGIa~~~~~--~~a~~aaDivl~~~~l~ 307 (450)
.|.-|+|.-=.++++...- .|..|..+|-+..= +.+|... .|-++..... ...-..|||++..-+-.
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~~ 211 (284)
T PRK14170 135 SFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLA 211 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCc
Confidence 3556667555555555432 48899999997432 3455444 4444444222 23346789998754433
No 212
>PRK10527 hypothetical protein; Provisional
Probab=39.24 E-value=47 Score=28.45 Aligned_cols=49 Identities=14% Similarity=0.042 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHhhhcccccHHHHHHHHHhccCcccccchhHHHHHHHHhhh
Q 013069 329 RGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLWAHAQR 382 (450)
Q Consensus 329 ~~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (450)
|...+..+...+.++++++.+|.++..++...+|+.- +.|..+|-..++
T Consensus 6 ~~~lG~~~~~LG~iGi~LPlLPTTPFlLLAa~cfaRs-----SpR~~~WL~~h~ 54 (125)
T PRK10527 6 LIIIGWLAVVLGTLGVVLPLLPTTPFILLAAWCFARS-----SPRFHAWLLYRS 54 (125)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHcC-----CHHHHHHHHcCc
Confidence 5566777777788899999999999999977776653 446666655443
No 213
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=39.07 E-value=87 Score=28.80 Aligned_cols=93 Identities=15% Similarity=0.181 Sum_probs=55.3
Q ss_pred CCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeec
Q 013069 166 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 245 (450)
Q Consensus 166 l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~ 245 (450)
+.-++-||+-++|++.+++|++|++-|...... +++=+... ...++....+.|-..
T Consensus 100 lkahlypDav~~ik~wk~~g~~vyiYSSGSV~A-----QkL~Fghs-------------------~agdL~~lfsGyfDt 155 (229)
T COG4229 100 LKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKA-----QKLFFGHS-------------------DAGDLNSLFSGYFDT 155 (229)
T ss_pred cccccCHhHHHHHHHHHHcCCcEEEEcCCCchh-----HHHhhccc-------------------ccccHHhhhcceeec
Confidence 456788999999999999999999988766542 22211100 001111122223333
Q ss_pred ChhhH------HHHHHHHhhcCCEEEEecCCCCChHhHhhCCe
Q 013069 246 FPEHK------YEIVKHLQARNHICGMIGNGVNDAPALKKADI 282 (450)
Q Consensus 246 ~P~~K------~~iV~~lq~~g~~v~~iGDG~ND~~al~~Adv 282 (450)
+---| .+|++.+.-..+-++++.|..+...|-+.+++
T Consensus 156 tiG~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl 198 (229)
T COG4229 156 TIGKKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGL 198 (229)
T ss_pred cccccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcch
Confidence 32222 34555554456679999999887776555544
No 214
>COG2832 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.69 E-value=51 Score=27.86 Aligned_cols=50 Identities=14% Similarity=0.129 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHhccCcccccchhHHHHHHHHhh
Q 013069 327 MVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLWAHAQ 381 (450)
Q Consensus 327 ~~~~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 381 (450)
.+|.+.|..+...+.++++.+.+|.++..++...+|...+ .|...|-..+
T Consensus 4 ~i~i~iGfl~l~LGIiGifLPlLPTTPFlLLaa~cFaRsS-----pRf~~WLl~~ 53 (119)
T COG2832 4 IIYIILGFLSLALGIIGIFLPLLPTTPFLLLAAACFARSS-----PRFHAWLLRH 53 (119)
T ss_pred cHHHHHHHHHHHHHHHHhcCcccCCcHHHHHHHHHHHcCC-----cHHHHHHHcC
Confidence 4677777777788888999999999999888666665532 3555555443
No 215
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=37.61 E-value=2.8e+02 Score=27.57 Aligned_cols=34 Identities=24% Similarity=0.317 Sum_probs=26.2
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013069 172 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 172 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 209 (450)
.|+..++.+. +..+|+-+....+....|+..+++
T Consensus 90 ~DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VP 123 (310)
T COG0078 90 KDTARVLSRM----VDAIMIRGFSHETLEELAKYSGVP 123 (310)
T ss_pred HHHHHHHHhh----hheEEEecccHHHHHHHHHhCCCc
Confidence 3455555544 677899999999999999998886
No 216
>PLN02591 tryptophan synthase
Probab=37.61 E-value=1.7e+02 Score=28.17 Aligned_cols=41 Identities=20% Similarity=0.315 Sum_probs=26.6
Q ss_pred hhhHHHHHHHHhhcCCEEEEecCCCC---ChHhHhh--CCeeEEecc
Q 013069 247 PEHKYEIVKHLQARNHICGMIGNGVN---DAPALKK--ADIGIAVAD 288 (450)
Q Consensus 247 P~~K~~iV~~lq~~g~~v~~iGDG~N---D~~al~~--AdvGIa~~~ 288 (450)
|.+-.+.++.+++....-+++|-|++ |+..+.. || |+-+|+
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GAD-GvIVGS 219 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGAD-GVIVGS 219 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCC-EEEECH
Confidence 45556778888876666777899998 4444433 44 555543
No 217
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=37.08 E-value=5.6e+02 Score=28.87 Aligned_cols=46 Identities=11% Similarity=-0.226 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--ccccHHHHHHHH
Q 013069 313 VLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLDTVIAIL 358 (450)
Q Consensus 313 I~~~R~~~~~i~~~~~~~~~~~~~~i~l~~~~~~--~~~pl~~~~~l~ 358 (450)
-+.-+.+.+|+.+.+.|++..+..++++..++.+ ..++.+++.+++
T Consensus 684 r~~~~~I~~nl~~a~~~n~~~i~~a~~g~~~~~~a~~~~~~ss~~v~~ 731 (741)
T PRK11033 684 RATHANIRQNITIALGLKAIFLVTTLLGITGLWLAVLADSGATALVTA 731 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHcChHHHHHH
Confidence 3345789999999999999999988888777654 455666666653
No 218
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.02 E-value=1.3e+02 Score=29.75 Aligned_cols=64 Identities=14% Similarity=0.220 Sum_probs=38.8
Q ss_pred ceeecChhhHHHHHHHHhh--cCCEEEEecCCCCC---h-HhHh------hCCeeEEeccc--hHHHhhccCEEecCC
Q 013069 241 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND---A-PALK------KADIGIAVADA--TDAARSAADIVLTEP 304 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND---~-~al~------~AdvGIa~~~~--~~~a~~aaDivl~~~ 304 (450)
.|.-|+|.-=.++++.... .|..|..+|-+..= . .||. .|.|-++.... -...-..||+++..-
T Consensus 137 ~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~Av 214 (295)
T PRK14174 137 CFVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAAI 214 (295)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEec
Confidence 3556777665555555442 48899999998432 2 2433 35666665533 234457899998754
No 219
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.85 E-value=2.3e+02 Score=27.90 Aligned_cols=64 Identities=14% Similarity=0.175 Sum_probs=39.0
Q ss_pred ceeecChhhHHHHHHHHhh--cCCEEEEecCCCCC----hHhHhh------CCeeEEeccch--HHHhhccCEEecCC
Q 013069 241 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKK------ADIGIAVADAT--DAARSAADIVLTEP 304 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~al~~------AdvGIa~~~~~--~~a~~aaDivl~~~ 304 (450)
.|.-|+|.-=.++++...- .|..|..+|-+..= +-+|.. |.|-++..... ...-..||+++..-
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~Av 212 (286)
T PRK14184 135 GFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVAI 212 (286)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEec
Confidence 4566777655556655542 38899999987422 235544 55666655332 23456889988653
No 220
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=35.73 E-value=1e+02 Score=30.41 Aligned_cols=38 Identities=24% Similarity=0.264 Sum_probs=27.0
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHH-HHHHHhCCC
Q 013069 172 HDSAETIRRALSLGLGVKMITGDQLAIAK-ETGRRLGMG 209 (450)
Q Consensus 172 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~-~ia~~lgi~ 209 (450)
+++...=+.|+..|.+++++|......+. ...+.++..
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 45566677888999999999987765554 445555553
No 221
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=35.54 E-value=11 Score=36.63 Aligned_cols=34 Identities=12% Similarity=0.127 Sum_probs=25.2
Q ss_pred HHHHHHhhcCCEEEEecCCC-CChHhHhhCCeeEE
Q 013069 252 EIVKHLQARNHICGMIGNGV-NDAPALKKADIGIA 285 (450)
Q Consensus 252 ~iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIa 285 (450)
.+++.+......++||||.. .|+.+-+.|++--.
T Consensus 210 ~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si 244 (279)
T TIGR01452 210 CITENFSIDPARTLMVGDRLETDILFGHRCGMTTV 244 (279)
T ss_pred HHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEE
Confidence 34444544457899999995 99999999987643
No 222
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.44 E-value=1.5e+02 Score=29.22 Aligned_cols=66 Identities=15% Similarity=0.237 Sum_probs=40.4
Q ss_pred ceeecChhhHHHHHHHHhh--cCCEEEEecC-CCCChH---hHhhCCeeEEec--cc--hHHHhhccCEEecCCCc
Q 013069 241 GFAGVFPEHKYEIVKHLQA--RNHICGMIGN-GVNDAP---ALKKADIGIAVA--DA--TDAARSAADIVLTEPGL 306 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGD-G~ND~~---al~~AdvGIa~~--~~--~~~a~~aaDivl~~~~l 306 (450)
.|.-|+|.-=.++++...- .|..++++|- |.-=.| +|..++.-+.+- .. ....-..||+|+..-+-
T Consensus 136 ~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~avg~ 211 (284)
T PRK14179 136 VMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVAIGR 211 (284)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEecCc
Confidence 3566677655555555432 4889999999 555544 556666666653 22 22345679999875443
No 223
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=35.19 E-value=30 Score=28.78 Aligned_cols=80 Identities=16% Similarity=0.252 Sum_probs=53.4
Q ss_pred HHHHHhcchhhhhhceecCCCCcC--CCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCC-eE-EEEcCCcHHHHHHHHH
Q 013069 129 NKFAERGLRSLAVAYQEVPEGSKE--SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GV-KMITGDQLAIAKETGR 204 (450)
Q Consensus 129 ~~~a~~Glr~l~vA~~~~~~~~~~--~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi-~v-~mlTGD~~~~a~~ia~ 204 (450)
.-+...|++++.+..+ +|.++.. -.+.+..++|+-....+.-+.+++.++.+++.+- ++ +++-|-....-...++
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~ 99 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLK 99 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHH
Confidence 3456688888766533 3332211 1245567888888877778999999999999987 54 5666655444345777
Q ss_pred HhCCC
Q 013069 205 RLGMG 209 (450)
Q Consensus 205 ~lgi~ 209 (450)
..|.+
T Consensus 100 ~~G~D 104 (119)
T cd02067 100 EIGVD 104 (119)
T ss_pred HcCCe
Confidence 88874
No 224
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=35.03 E-value=78 Score=24.34 Aligned_cols=47 Identities=15% Similarity=0.295 Sum_probs=36.6
Q ss_pred eccCCCCCCcchHHHHHHHHhCCCeEEE-EcCCcHHHHHHHHHHhCCC
Q 013069 163 LIPLFDPPIHDSAETIRRALSLGLGVKM-ITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 163 ~i~l~D~lr~~~~~~I~~l~~~Gi~v~m-lTGD~~~~a~~ia~~lgi~ 209 (450)
++++.+..++.+.+..+.|++.|+++.+ ..+.....-..-|.+.|++
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 4445666778888899999999999987 5666677777778888874
No 225
>COG4996 Predicted phosphatase [General function prediction only]
Probab=33.45 E-value=97 Score=26.91 Aligned_cols=56 Identities=18% Similarity=0.125 Sum_probs=47.0
Q ss_pred CCCCcEEEEeccCCCC------CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013069 154 SGSPWQFIGLIPLFDP------PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 154 ~e~~~~~lG~i~l~D~------lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 209 (450)
.+.+++.+.--.++|. ++++++++++.+|+.|.-+-.+|=.....|...-+.+++.
T Consensus 20 l~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~ 81 (164)
T COG4996 20 LEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLL 81 (164)
T ss_pred cCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchh
Confidence 3455666666666664 8899999999999999999999999999999999999885
No 226
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=33.06 E-value=3.6e+02 Score=24.15 Aligned_cols=67 Identities=15% Similarity=0.209 Sum_probs=38.4
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHH-HHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh-hHHHH
Q 013069 176 ETIRRALSLGLGVKMITGDQLAIAKETG-RRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE-HKYEI 253 (450)
Q Consensus 176 ~~I~~l~~~Gi~v~mlTGD~~~~a~~ia-~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~-~K~~i 253 (450)
..++.|+..|++++...|+ ...+..+- -++-. . .+.+.|+=+|-+ +=..+
T Consensus 70 ~l~~~l~~~Gf~pv~~kG~-~Dv~laIDame~~~-~--------------------------~~iD~~vLvSgD~DF~~L 121 (160)
T TIGR00288 70 KLIEAVVNQGFEPIIVAGD-VDVRMAVEAMELIY-N--------------------------PNIDAVALVTRDADFLPV 121 (160)
T ss_pred HHHHHHHHCCceEEEecCc-ccHHHHHHHHHHhc-c--------------------------CCCCEEEEEeccHhHHHH
Confidence 4578889999999888873 22222221 11100 0 122334444433 22467
Q ss_pred HHHHhhcCCEEEEecCC
Q 013069 254 VKHLQARNHICGMIGNG 270 (450)
Q Consensus 254 V~~lq~~g~~v~~iGDG 270 (450)
|+.+++.|..|..+|-.
T Consensus 122 v~~lre~G~~V~v~g~~ 138 (160)
T TIGR00288 122 INKAKENGKETIVIGAE 138 (160)
T ss_pred HHHHHHCCCEEEEEeCC
Confidence 88889899988888753
No 227
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=31.72 E-value=4e+02 Score=26.92 Aligned_cols=84 Identities=19% Similarity=0.278 Sum_probs=60.9
Q ss_pred eccCCCCCCcchHHHHHHH-HhCCCeEEEEcCCc--HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc
Q 013069 163 LIPLFDPPIHDSAETIRRA-LSLGLGVKMITGDQ--LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 239 (450)
Q Consensus 163 ~i~l~D~lr~~~~~~I~~l-~~~Gi~v~mlTGD~--~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (450)
+.++.|+-|-+...++... +++|+.+.+--..- .+.++.+++.+||+. -.+...-
T Consensus 219 vtAMhDaTrGGla~aLnEmA~aSgvgi~I~ee~Ipv~~eVr~vce~lGiDP----------------------l~~anEG 276 (339)
T COG0309 219 VTAMHDATRGGLAGALNEMAEASGVGISIEEEKIPVREEVRGVCELLGLDP----------------------LELANEG 276 (339)
T ss_pred hhhccCCchhHHHHHHHHHHHHcCCeEEEeeccccccHHHHHHHHHhCCCH----------------------HHhhcCc
Confidence 6789999999999998877 56777776654333 378899999999962 1222223
Q ss_pred cceeecChhhHHHHHHHHhhcC-CEEEEec
Q 013069 240 DGFAGVFPEHKYEIVKHLQARN-HICGMIG 268 (450)
Q Consensus 240 ~v~a~~~P~~K~~iV~~lq~~g-~~v~~iG 268 (450)
.+.+-+.|++=.++++.|++.+ .....||
T Consensus 277 ~lv~~V~~~~a~~~l~~L~~~~~~~A~iIG 306 (339)
T COG0309 277 KLVIAVPPEHAEEVLEALRSHGLKDAAIIG 306 (339)
T ss_pred eEEEEECHHHHHHHHHHHHhcCCccceeEE
Confidence 4677888888888999999887 3444444
No 228
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=31.40 E-value=75 Score=24.89 Aligned_cols=49 Identities=18% Similarity=0.266 Sum_probs=37.4
Q ss_pred EEeccCCC---CCCcchHHHHHHHHhCCCeEEEE-cCCcHHHHHHHHHHhCCC
Q 013069 161 IGLIPLFD---PPIHDSAETIRRALSLGLGVKMI-TGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 161 lG~i~l~D---~lr~~~~~~I~~l~~~Gi~v~ml-TGD~~~~a~~ia~~lgi~ 209 (450)
+.++++.+ ...+-+.+..+.|+++|+.+.+- ++++......-|...|++
T Consensus 2 v~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 2 VVIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 34666777 66677888899999999998877 555566667778888874
No 229
>PLN02423 phosphomannomutase
Probab=31.12 E-value=72 Score=30.42 Aligned_cols=31 Identities=13% Similarity=0.223 Sum_probs=26.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAK 200 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~ 200 (450)
++.+.+.++|++|++. +++++.||+......
T Consensus 24 ~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~ 54 (245)
T PLN02423 24 EATPEMLEFMKELRKV-VTVGVVGGSDLSKIS 54 (245)
T ss_pred cCCHHHHHHHHHHHhC-CEEEEECCcCHHHHH
Confidence 4778899999999976 999999999776543
No 230
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.87 E-value=4.1e+02 Score=26.14 Aligned_cols=66 Identities=20% Similarity=0.248 Sum_probs=39.3
Q ss_pred ceeecChhhHHHHHHHHhh--cCCEEEEecCCCCC----hHhHhhCCeeEEe--ccc--hHHHhhccCEEecCCCc
Q 013069 241 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKKADIGIAV--ADA--TDAARSAADIVLTEPGL 306 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~al~~AdvGIa~--~~~--~~~a~~aaDivl~~~~l 306 (450)
.|.-|+|.-=.++++...- .|..|+.+|-+..= +.+|...+.-+.+ ... -...-..|||++..-+-
T Consensus 135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsAvGk 210 (282)
T PRK14166 135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGC 210 (282)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCC
Confidence 4556677665566665542 48899999997532 3456555555544 322 22344689999875443
No 231
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=30.81 E-value=88 Score=25.97 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=28.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCC
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 208 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi 208 (450)
--+++.++++.+++.|++++.+|++.. -...+.+.|.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 346889999999999999999998774 3335554443
No 232
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=30.55 E-value=1.5e+02 Score=28.49 Aligned_cols=51 Identities=25% Similarity=0.292 Sum_probs=43.5
Q ss_pred CCCcEEEEeccCCCCCCcchHHHHHHHHhC---CCeEEEEcCCcHHHHHHHHHH
Q 013069 155 GSPWQFIGLIPLFDPPIHDSAETIRRALSL---GLGVKMITGDQLAIAKETGRR 205 (450)
Q Consensus 155 e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~---Gi~v~mlTGD~~~~a~~ia~~ 205 (450)
+.+|.=+=+++=.+-+-||..++|+.++.. |+.|+-.+.|++..|+.++.-
T Consensus 90 ~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 90 GTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred CCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 456777777777777899999999999999 999998888999999988754
No 233
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=30.47 E-value=1e+02 Score=29.48 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=57.3
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhH-
Q 013069 172 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHK- 250 (450)
Q Consensus 172 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K- 250 (450)
++..++++.||+.|..+.++|-=.... ..+-..+|+... ++.++..+.+ .-.-|+-+
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~~--------------------fD~vv~S~e~-g~~KPDp~I 173 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSAY--------------------FDFVVESCEV-GLEKPDPRI 173 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHHHh--------------------hhhhhhhhhh-ccCCCChHH
Confidence 455599999999998877777533322 244455555310 0111111110 01112222
Q ss_pred -HHHHHHHhhcCCEEEEecCC-CCChHhHhhCCee-EEeccchHHHhhc
Q 013069 251 -YEIVKHLQARNHICGMIGNG-VNDAPALKKADIG-IAVADATDAARSA 296 (450)
Q Consensus 251 -~~iV~~lq~~g~~v~~iGDG-~ND~~al~~AdvG-Ia~~~~~~~a~~a 296 (450)
...++.+......|+++||. .||...-+.++.- +-+.+.....+..
T Consensus 174 f~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~ 222 (237)
T KOG3085|consen 174 FQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKEL 222 (237)
T ss_pred HHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhh
Confidence 33456666667789999995 7999888877754 4444544444433
No 234
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=30.38 E-value=71 Score=27.69 Aligned_cols=80 Identities=13% Similarity=0.144 Sum_probs=50.7
Q ss_pred HHHHhcchhhhhhceecCCCCcC-CCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCC--eEEEEcCCc------HHHHH
Q 013069 130 KFAERGLRSLAVAYQEVPEGSKE-SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL--GVKMITGDQ------LAIAK 200 (450)
Q Consensus 130 ~~a~~Glr~l~vA~~~~~~~~~~-~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi--~v~mlTGD~------~~~a~ 200 (450)
-+...|+.|+.+..+.-+++--+ -.+.+-.++|+-++.-.--+..+++++.|++.|+ .++|+-|-. .....
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~ 103 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVE 103 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHH
Confidence 45678998888877653322111 1133457788877777777788999999999998 345565531 11123
Q ss_pred HHHHHhCCC
Q 013069 201 ETGRRLGMG 209 (450)
Q Consensus 201 ~ia~~lgi~ 209 (450)
.-++++|+.
T Consensus 104 ~~l~~~Gv~ 112 (134)
T TIGR01501 104 KRFKEMGFD 112 (134)
T ss_pred HHHHHcCCC
Confidence 456788864
No 235
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=30.36 E-value=2.1e+02 Score=28.13 Aligned_cols=153 Identities=16% Similarity=0.198 Sum_probs=83.5
Q ss_pred cCCHHHHHhhhcCC--------hhhHHHHHHHHHHHHHhcchhhhhhceecCCCC------------------cCCCCCC
Q 013069 104 KGSPEQILNLLHNK--------SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS------------------KESSGSP 157 (450)
Q Consensus 104 KGa~~~i~~~~~~~--------~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~------------------~~~~e~~ 157 (450)
-|.|..+.+..... =.+-.+++..+.+++++|+.++.+..++-|+-. .+.+. .
T Consensus 74 HGv~~~~~~~~~~~gl~viDaTCP~V~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~l~-~ 152 (280)
T TIGR00216 74 HGVPPEVREELEKKGLEVIDATCPLVTKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLEDLENFK-V 152 (280)
T ss_pred CCCCHHHHHHHHHCCCeEEeCCCcccHHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHHHHHhCC-C
Confidence 46666666654311 123357888999999999999999987665321 00000 0
Q ss_pred cEEEEeccCCCCCCcchHHHHHHHHhCC----C----eEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhc
Q 013069 158 WQFIGLIPLFDPPIHDSAETIRRALSLG----L----GVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVA 229 (450)
Q Consensus 158 ~~~lG~i~l~D~lr~~~~~~I~~l~~~G----i----~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~ 229 (450)
..-++++.=.-..+.+..+.++.|++.. + .++-.|-+.+..+..+|+++.+. +
T Consensus 153 ~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~m-------i------------ 213 (280)
T TIGR00216 153 EDLLGVVSQTTLSQEDTKEIVAELKARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLM-------I------------ 213 (280)
T ss_pred CCcEEEEEcCCCcHHHHHHHHHHHHHhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEE-------E------------
Confidence 1224444444445556666666666544 1 24555666666666666654431 0
Q ss_pred CChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCC-CCChHhHhhCC-eeEEec
Q 013069 230 LPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNG-VNDAPALKKAD-IGIAVA 287 (450)
Q Consensus 230 ~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG-~ND~~al~~Ad-vGIa~~ 287 (450)
+...-...+=..+.+..++.|..+..|.+- --|...|+.+. |||.-|
T Consensus 214 -----------VVGg~nSsNT~rL~ei~~~~~~~t~~Ie~~~el~~~~l~~~~~VGiTAG 262 (280)
T TIGR00216 214 -----------VIGGKNSSNTTRLYEIAEEHGPPSYLIETAEELPEEWLKGVKVVGITAG 262 (280)
T ss_pred -----------EECCCCCchHHHHHHHHHHhCCCEEEECChHHCCHHHhCCCCEEEEEec
Confidence 122222222234555555566667777653 34556777554 577665
No 236
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=29.97 E-value=1.7e+02 Score=27.70 Aligned_cols=37 Identities=14% Similarity=0.073 Sum_probs=29.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 206 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l 206 (450)
+-||+...++.|+..|+.+.++|+-+..++..--...
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~ 129 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRH 129 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHh
Confidence 4559999999999999999999999766555333333
No 237
>PRK15108 biotin synthase; Provisional
Probab=29.88 E-value=5.9e+02 Score=25.64 Aligned_cols=86 Identities=9% Similarity=0.071 Sum_probs=50.4
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHH
Q 013069 172 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKY 251 (450)
Q Consensus 172 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~ 251 (450)
+...+.++.+++.|+.+.+--|.-......--+..|+..-..+... ..+... .++..-+.+++.
T Consensus 111 e~i~~~i~~ik~~~i~v~~s~G~ls~e~l~~LkeAGld~~n~~leT--------------~p~~f~--~I~~~~~~~~rl 174 (345)
T PRK15108 111 PYLEQMVQGVKAMGLETCMTLGTLSESQAQRLANAGLDYYNHNLDT--------------SPEFYG--NIITTRTYQERL 174 (345)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcCCHHHHHHHHHcCCCEEeecccc--------------ChHhcC--CCCCCCCHHHHH
Confidence 5678889999988988776556555555555556777521110000 001111 123334667788
Q ss_pred HHHHHHhhcCCEEE---EecCCCCC
Q 013069 252 EIVKHLQARNHICG---MIGNGVND 273 (450)
Q Consensus 252 ~iV~~lq~~g~~v~---~iGDG~ND 273 (450)
+.++.+++.|..+. ++|=|-.+
T Consensus 175 ~~i~~a~~~G~~v~sg~i~GlgEt~ 199 (345)
T PRK15108 175 DTLEKVRDAGIKVCSGGIVGLGETV 199 (345)
T ss_pred HHHHHHHHcCCceeeEEEEeCCCCH
Confidence 88888888875543 67776554
No 238
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.60 E-value=3.1e+02 Score=26.94 Aligned_cols=65 Identities=18% Similarity=0.258 Sum_probs=39.9
Q ss_pred ceeecChhhHHHHHHHHhh--cCCEEEEecCCCCC----hHhHhhCCeeEEec--cchH--HHhhccCEEecCCC
Q 013069 241 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKKADIGIAVA--DATD--AARSAADIVLTEPG 305 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~al~~AdvGIa~~--~~~~--~a~~aaDivl~~~~ 305 (450)
.|.-|+|.-=.++++...- .|..|..+|-+..= +.||...+.-+.+. ...+ ..-..|||++..-+
T Consensus 136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsAvG 210 (278)
T PRK14172 136 CFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVAIG 210 (278)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCC
Confidence 4566777666666666543 48899999997432 34565555555443 2222 23467999987544
No 239
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.56 E-value=3e+02 Score=27.07 Aligned_cols=66 Identities=18% Similarity=0.235 Sum_probs=38.9
Q ss_pred cceeecChhhHHHHHHHHhh--cCCEEEEecCCCCC----hHhHhh--CCeeEEeccch--HHHhhccCEEecCCC
Q 013069 240 DGFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKK--ADIGIAVADAT--DAARSAADIVLTEPG 305 (450)
Q Consensus 240 ~v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~al~~--AdvGIa~~~~~--~~a~~aaDivl~~~~ 305 (450)
..|.-|+|.-=.++++..+- .|..|..+|-+..= +.+|.. |.|-++-.... ......||+++..-+
T Consensus 135 ~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~AvG 210 (284)
T PRK14190 135 DTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIVAVG 210 (284)
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEEecC
Confidence 34666777666666666543 48899999987422 245544 44444433222 234568899886543
No 240
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=28.89 E-value=90 Score=30.89 Aligned_cols=48 Identities=25% Similarity=0.377 Sum_probs=39.8
Q ss_pred EeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH---HhCCC
Q 013069 162 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR---RLGMG 209 (450)
Q Consensus 162 G~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~---~lgi~ 209 (450)
|++-..+.+=|++.++++.|+.+|-++.++|.....+-+...+ .+|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 7777788999999999999999999999999888776666654 45664
No 241
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=28.02 E-value=52 Score=29.90 Aligned_cols=29 Identities=24% Similarity=0.447 Sum_probs=22.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHH
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLA 197 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~ 197 (450)
+|-+++.+++++|.+.|..++++|+....
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 46689999999999999988888887643
No 242
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=27.50 E-value=1e+02 Score=26.89 Aligned_cols=90 Identities=16% Similarity=0.152 Sum_probs=56.3
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhh
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 238 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (450)
.-+++++++|.|...+-.+-+.|+++|++|+-+--.... . .-+|.. . ..++.++.+.
T Consensus 17 K~IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVNP~~~~--~---eiLG~k--~----------------y~sL~dIpe~ 73 (140)
T COG1832 17 KTIAVVGASDKPDRPSYRVAKYLQQKGYRVIPVNPKLAG--E---EILGEK--V----------------YPSLADIPEP 73 (140)
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHCCCEEEeeCcccch--H---HhcCch--h----------------hhcHHhCCCC
Confidence 568999999999999999999999999999988542110 1 112211 0 0111111122
Q ss_pred c---cceeecChhhHHHHHHHHhhcCCEEEEecCCCCC
Q 013069 239 A---DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVND 273 (450)
Q Consensus 239 ~---~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND 273 (450)
. ++|- .|+.=.++++..-+.+..+.+.--|+-+
T Consensus 74 IDiVdvFR--~~e~~~~i~~eal~~~~kv~W~QlGi~n 109 (140)
T COG1832 74 IDIVDVFR--RSEAAPEVAREALEKGAKVVWLQLGIRN 109 (140)
T ss_pred CcEEEEec--ChhhhHHHHHHHHhhCCCeEEEecCcCC
Confidence 2 2332 3566677887777777777777767533
No 243
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=27.07 E-value=54 Score=29.14 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=20.4
Q ss_pred CcchHHHHHHHHhCCCeEEEEcC
Q 013069 171 IHDSAETIRRALSLGLGVKMITG 193 (450)
Q Consensus 171 r~~~~~~I~~l~~~Gi~v~mlTG 193 (450)
-+++.++|++|.+.|+.++|+|-
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE
T ss_pred chhHHHHHHHHHhcCCeEEEEeC
Confidence 45799999999999999999985
No 244
>PRK13671 hypothetical protein; Provisional
Probab=26.72 E-value=2.7e+02 Score=27.67 Aligned_cols=97 Identities=20% Similarity=0.261 Sum_probs=61.6
Q ss_pred EEEeccCCCCCCcchHHHHHHHHh-CCC--eEEEEcCCcHH----------HHHHHHHHhCCCCCCCCCccccCCchhhh
Q 013069 160 FIGLIPLFDPPIHDSAETIRRALS-LGL--GVKMITGDQLA----------IAKETGRRLGMGTNMYPSSALSGQDRDES 226 (450)
Q Consensus 160 ~lG~i~l~D~lr~~~~~~I~~l~~-~Gi--~v~mlTGD~~~----------~a~~ia~~lgi~~~~~~~~~l~~~~~~~~ 226 (450)
.+|+|+=.||+-.|=...++++++ .+. -+++.+|+... .-.+.+..+|.+-
T Consensus 2 ~~GIIaeFNP~H~GHl~~~~~a~~~~~~d~vi~vpSg~~~qrg~pa~~~~~~R~~ma~~~G~DL---------------- 65 (298)
T PRK13671 2 AIGIIAEYNPFHNGHIYQINYIKNKFPNEKIIVILSGKYTQRGEIAVASFEKRKKIALKYGVDK---------------- 65 (298)
T ss_pred ceeEEeeeCCccHHHHHHHHHHHHhcCCCEEEEEECcCCCCCCCCCCCCHHHHHHHHHHcCCCE----------------
Confidence 479999999999999999999887 344 35667888742 2224445555431
Q ss_pred hhcCChhHHhhhccceeecChhhHHHHHHHHhhcCCEEEEecCCCCChHhHhh
Q 013069 227 IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKK 279 (450)
Q Consensus 227 ~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~al~~ 279 (450)
+-+++.--.+..++.||. --|+.|...|-..+++|.-.+|...|+.
T Consensus 66 ViELP~~~a~~sAe~FA~-------gaV~lL~~lgvd~l~FGsE~~d~~~l~~ 111 (298)
T PRK13671 66 VIKLPFEYATQAAHIFAK-------GAIKKLNKEKIDKLIFGSESNDIELMYK 111 (298)
T ss_pred EEeccHHHHhhchHHHHH-------HHHHHHHHcCCCEEEECCCCCCHHHHHH
Confidence 112222223333334433 3577777777668889998888766643
No 245
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=26.34 E-value=68 Score=26.67 Aligned_cols=30 Identities=13% Similarity=0.120 Sum_probs=25.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHH
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIA 199 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a 199 (450)
--+++.++++.+++.|++|+.+|+......
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~l 88 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTL 88 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence 346889999999999999999999765433
No 246
>PLN02645 phosphoglycolate phosphatase
Probab=26.33 E-value=1.3e+02 Score=29.66 Aligned_cols=59 Identities=10% Similarity=0.101 Sum_probs=35.4
Q ss_pred HHHHHhhcCCEEEEecCCC-CChHhHhhCCeeEE-e--ccch-HHHh-----hccCEEecCCCchHHHHHH
Q 013069 253 IVKHLQARNHICGMIGNGV-NDAPALKKADIGIA-V--ADAT-DAAR-----SAADIVLTEPGLNVIITAV 313 (450)
Q Consensus 253 iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIa-~--~~~~-~~a~-----~aaDivl~~~~l~~i~~~I 313 (450)
+.+.+.-....++||||.. +|+.+-+.|++--. + |..+ +... ..+|+++. ++..+..++
T Consensus 239 a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~--~~~~l~~~~ 307 (311)
T PLN02645 239 LANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTS--KISDFLTLK 307 (311)
T ss_pred HHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEEC--CHHHHHHHh
Confidence 3344444456799999997 99999999986432 2 3111 2221 24677773 455555433
No 247
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.01 E-value=3.7e+02 Score=26.64 Aligned_cols=65 Identities=20% Similarity=0.282 Sum_probs=38.1
Q ss_pred ceeecChhhHHHHHHHHhh--cCCEEEEecCCCCC----hHhHhh--CCeeEEeccc--hHHHhhccCEEecCCC
Q 013069 241 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKK--ADIGIAVADA--TDAARSAADIVLTEPG 305 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~al~~--AdvGIa~~~~--~~~a~~aaDivl~~~~ 305 (450)
.|.-|+|.-=.++++...- .|..|+.+|-+..= +-||.. |.|-++-... -...-..|||++..-+
T Consensus 136 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIsAvG 210 (297)
T PRK14186 136 GLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVAAAG 210 (297)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEccC
Confidence 3555677665666665542 48899999987421 345544 4444444422 2234467999987544
No 248
>PRK00208 thiG thiazole synthase; Reviewed
Probab=25.88 E-value=2.1e+02 Score=27.60 Aligned_cols=51 Identities=25% Similarity=0.281 Sum_probs=43.0
Q ss_pred CCCcEEEEeccCCCCCCcchHHHHHHHHhC---CCeEEEEcCCcHHHHHHHHHH
Q 013069 155 GSPWQFIGLIPLFDPPIHDSAETIRRALSL---GLGVKMITGDQLAIAKETGRR 205 (450)
Q Consensus 155 e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~---Gi~v~mlTGD~~~~a~~ia~~ 205 (450)
+.+|.=+=+++=.+-+-+|..++++.++.. |+.|+-.+-|++..|+.++.-
T Consensus 90 ~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 90 GTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred CCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 456777777777777899999999999999 999997888888888888754
No 249
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=25.64 E-value=67 Score=31.45 Aligned_cols=41 Identities=20% Similarity=0.135 Sum_probs=31.3
Q ss_pred cEEEEeccCCCCCCcchHHHHHHHHhCCCe-EEEEcCCcHHH
Q 013069 158 WQFIGLIPLFDPPIHDSAETIRRALSLGLG-VKMITGDQLAI 198 (450)
Q Consensus 158 ~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~-v~mlTGD~~~~ 198 (450)
+..+--+...|.-|......+..++.+|++ |..+|||.+..
T Consensus 71 ~~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~~ 112 (287)
T PF02219_consen 71 IEPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPKG 112 (287)
T ss_dssp --EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TSTT
T ss_pred CceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCCC
Confidence 466777888888888999999999999995 99999998743
No 250
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.57 E-value=3.7e+02 Score=26.43 Aligned_cols=65 Identities=22% Similarity=0.328 Sum_probs=39.4
Q ss_pred cceeecChhhHHHHHHHHhh--cCCEEEEecCC-CCChH---hHhhCC--eeEEeccch--HHHhhccCEEecCC
Q 013069 240 DGFAGVFPEHKYEIVKHLQA--RNHICGMIGNG-VNDAP---ALKKAD--IGIAVADAT--DAARSAADIVLTEP 304 (450)
Q Consensus 240 ~v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG-~ND~~---al~~Ad--vGIa~~~~~--~~a~~aaDivl~~~ 304 (450)
..|.-++|.-=.++++...- .|..|..+|-+ .-=-| +|...+ |-++..... ...-..||+++..-
T Consensus 129 ~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~Av 203 (279)
T PRK14178 129 PGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSAA 203 (279)
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEECC
Confidence 34566777666666665543 48899999998 34444 665444 444444322 23346789988654
No 251
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=25.43 E-value=1.2e+02 Score=22.76 Aligned_cols=47 Identities=17% Similarity=0.260 Sum_probs=34.6
Q ss_pred eccCCCCCCcchHHHHHHHHhCCCeEEEEc-CCcHHHHHHHHHHhCCC
Q 013069 163 LIPLFDPPIHDSAETIRRALSLGLGVKMIT-GDQLAIAKETGRRLGMG 209 (450)
Q Consensus 163 ~i~l~D~lr~~~~~~I~~l~~~Gi~v~mlT-GD~~~~a~~ia~~lgi~ 209 (450)
++++.+..++.+.+..+.|++.|+.|.+.. +.+.......|...|++
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~ 53 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGAR 53 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCC
Confidence 445566677788888999999999987744 44666677777777763
No 252
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=25.22 E-value=2.1e+02 Score=27.54 Aligned_cols=104 Identities=15% Similarity=0.063 Sum_probs=58.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH---hCCCCCCCCCccccCCchhhhh---hcCChhHHhhhcccee
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR---LGMGTNMYPSSALSGQDRDESI---VALPVDELIEKADGFA 243 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~---lgi~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~v~a 243 (450)
+-+++++.|+.+++.|+.|.-+|...+.....+.+. +||.-.... +..+...... ...+-.-++.+.-+|+
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~---~~~~~~~~~~~~~~~~~~~~~~~~GIlft 158 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSS---FPEDGIISFPVFDSALSRAPSFYDGILFT 158 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccc---cccCcceecccccCCCCCCceeecCeEEe
Confidence 457999999999999999999999998666655544 566422111 0000000000 0000001111111222
Q ss_pred ecChhhHHHHHHHHhh----cCCEEEEecCCCCChHhHh
Q 013069 244 GVFPEHKYEIVKHLQA----RNHICGMIGNGVNDAPALK 278 (450)
Q Consensus 244 ~~~P~~K~~iV~~lq~----~g~~v~~iGDG~ND~~al~ 278 (450)
.-.+|......+-. ....+.||-|....+..+.
T Consensus 159 --~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~ 195 (252)
T PF11019_consen 159 --GGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVE 195 (252)
T ss_pred --CCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHH
Confidence 34567776665543 3567999999987775443
No 253
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=25.05 E-value=52 Score=28.54 Aligned_cols=81 Identities=12% Similarity=0.189 Sum_probs=54.1
Q ss_pred HHHHHhcchhhhhhceecCCCCc-CCCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCC-eE-EEEcCCc------HHHH
Q 013069 129 NKFAERGLRSLAVAYQEVPEGSK-ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GV-KMITGDQ------LAIA 199 (450)
Q Consensus 129 ~~~a~~Glr~l~vA~~~~~~~~~-~~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi-~v-~mlTGD~------~~~a 199 (450)
.-+..+|++++.+..+.-+++-. .-.+.+-.++|+-.+.-...+..++.++.|++.|. .+ +++-|-- ....
T Consensus 25 ~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~ 104 (137)
T PRK02261 25 RALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEV 104 (137)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHH
Confidence 35567899999888654221100 01134557888888888899999999999999976 34 4454433 3445
Q ss_pred HHHHHHhCCC
Q 013069 200 KETGRRLGMG 209 (450)
Q Consensus 200 ~~ia~~lgi~ 209 (450)
...++++|+.
T Consensus 105 ~~~l~~~G~~ 114 (137)
T PRK02261 105 EKKFKEMGFD 114 (137)
T ss_pred HHHHHHcCCC
Confidence 5677888863
No 254
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=24.81 E-value=1.4e+02 Score=28.42 Aligned_cols=24 Identities=17% Similarity=0.365 Sum_probs=13.9
Q ss_pred HHHHHHHhhcCCEEEEecCCCCCh
Q 013069 251 YEIVKHLQARNHICGMIGNGVNDA 274 (450)
Q Consensus 251 ~~iV~~lq~~g~~v~~iGDG~ND~ 274 (450)
.+.++.+++....-.++|-|+|+.
T Consensus 176 ~~~i~~lr~~~~~pI~vggGI~~~ 199 (242)
T cd04724 176 KELIKRIRKYTDLPIAVGFGISTP 199 (242)
T ss_pred HHHHHHHHhcCCCcEEEEccCCCH
Confidence 355555555444556667777743
No 255
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=24.74 E-value=34 Score=31.61 Aligned_cols=79 Identities=19% Similarity=0.283 Sum_probs=53.7
Q ss_pred HHHHHhcchhhhhhceecCCCCcC--CCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCC--eEEEEcCCcHHHHHHHHH
Q 013069 129 NKFAERGLRSLAVAYQEVPEGSKE--SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL--GVKMITGDQLAIAKETGR 204 (450)
Q Consensus 129 ~~~a~~Glr~l~vA~~~~~~~~~~--~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi--~v~mlTGD~~~~a~~ia~ 204 (450)
.-|...|++|+.+..+ +|.++.- -.+.+..++|+-....+--+..++.|+.+++.+. ++.++=|-...+ ...++
T Consensus 104 ~~l~~~G~~vi~lG~~-~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~-~~~~~ 181 (201)
T cd02070 104 TMLEANGFEVIDLGRD-VPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGAPVN-QEFAD 181 (201)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECCcCC-HHHHH
Confidence 3556789999777632 3322211 1134557899998888888999999999999988 665555555443 34777
Q ss_pred HhCCC
Q 013069 205 RLGMG 209 (450)
Q Consensus 205 ~lgi~ 209 (450)
.+|-+
T Consensus 182 ~~GaD 186 (201)
T cd02070 182 EIGAD 186 (201)
T ss_pred HcCCc
Confidence 77764
No 256
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=24.68 E-value=2.1e+02 Score=28.76 Aligned_cols=51 Identities=20% Similarity=0.145 Sum_probs=45.3
Q ss_pred CCCcEEEEeccCCCCCCcchHHHHHHHHhC---CCeEEEEcCCcHHHHHHHHHH
Q 013069 155 GSPWQFIGLIPLFDPPIHDSAETIRRALSL---GLGVKMITGDQLAIAKETGRR 205 (450)
Q Consensus 155 e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~---Gi~v~mlTGD~~~~a~~ia~~ 205 (450)
+.+|.=+=+++=..-+-+|..++++.++.. |+.|...+-|++..|+.++.-
T Consensus 164 ~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 164 GWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred CCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 678888888888788889999999999999 999999999999999988754
No 257
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=24.53 E-value=1.9e+02 Score=29.04 Aligned_cols=57 Identities=32% Similarity=0.466 Sum_probs=37.8
Q ss_pred HHHHHHhhcCCEEEEecCCC--------------------CChHhHhhC--CeeEEecc----chHHHhh--ccCEEecC
Q 013069 252 EIVKHLQARNHICGMIGNGV--------------------NDAPALKKA--DIGIAVAD----ATDAARS--AADIVLTE 303 (450)
Q Consensus 252 ~iV~~lq~~g~~v~~iGDG~--------------------ND~~al~~A--dvGIa~~~----~~~~a~~--aaDivl~~ 303 (450)
.+++.|+++|..|+.+.=|+ .|-|+|-+- ++.+.++. +...+.+ .+|+|++|
T Consensus 70 ~L~~~l~~~g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviilD 149 (325)
T PRK00652 70 ALAEQLQARGLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIILD 149 (325)
T ss_pred HHHHHHHHCCCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEEc
Confidence 56777888888888884332 366655433 67888872 3334433 58999999
Q ss_pred CCchH
Q 013069 304 PGLNV 308 (450)
Q Consensus 304 ~~l~~ 308 (450)
|+|..
T Consensus 150 DGfQh 154 (325)
T PRK00652 150 DGLQH 154 (325)
T ss_pred CCccC
Confidence 98753
No 258
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=24.09 E-value=3.9e+02 Score=25.68 Aligned_cols=37 Identities=14% Similarity=0.239 Sum_probs=20.7
Q ss_pred CCcchHHHHHHHHhCCCeE-EEEcCCcH-HHHHHHHHHh
Q 013069 170 PIHDSAETIRRALSLGLGV-KMITGDQL-AIAKETGRRL 206 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v-~mlTGD~~-~~a~~ia~~l 206 (450)
+-++..+.++.+++.|+.. .+++-... +....++...
T Consensus 125 p~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 125 PLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred ChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 3356667777777777763 35554442 3444555443
No 259
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.02 E-value=4.5e+02 Score=25.86 Aligned_cols=65 Identities=17% Similarity=0.264 Sum_probs=37.7
Q ss_pred ceeecChhhHHHHHHHHhh--cCCEEEEecCCCCC----hHhHhh--CC--eeEEeccc--hHHHhhccCEEecCCC
Q 013069 241 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKK--AD--IGIAVADA--TDAARSAADIVLTEPG 305 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~al~~--Ad--vGIa~~~~--~~~a~~aaDivl~~~~ 305 (450)
.|.-|+|.-=.++++..+- .|..+..+|-+..= +-||.. .+ |-++-... -...-..||+++..-+
T Consensus 136 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k~ADIvV~AvG 212 (284)
T PRK14193 136 APLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTRRADIIVAAAG 212 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHhCCEEEEecC
Confidence 3455677666666665543 38899999987432 234544 34 44444422 2233467999986543
No 260
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=23.50 E-value=2.1e+02 Score=29.61 Aligned_cols=70 Identities=14% Similarity=0.198 Sum_probs=45.4
Q ss_pred chHHHHHHHHhCCC--eEEEEcCCcHHHHHHH-HHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhh
Q 013069 173 DSAETIRRALSLGL--GVKMITGDQLAIAKET-GRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 249 (450)
Q Consensus 173 ~~~~~I~~l~~~Gi--~v~mlTGD~~~~a~~i-a~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 249 (450)
++..++.++-+.+. .|+-.|+.|...|.+. |+++|++..+ +.-..+|..
T Consensus 100 Ga~~~~~kla~~~~~~gViasSaGNha~a~Ayaa~~LgipaTI----------------------------VmP~~tp~~ 151 (457)
T KOG1250|consen 100 GAGNALQKLAKQQKKAGVIASSAGNHAQAAAYAARKLGIPATI----------------------------VMPVATPLM 151 (457)
T ss_pred hHHHHHHHHHHhhhcCceEEecCccHHHHHHHHHHhcCCceEE----------------------------EecCCChHH
Confidence 56666777755543 4777888888777765 7899997432 344556666
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCC
Q 013069 250 KYEIVKHLQARNHICGMIGNGVND 273 (450)
Q Consensus 250 K~~iV~~lq~~g~~v~~iGDG~ND 273 (450)
| ++.++..|..|...|+..--
T Consensus 152 k---iq~~~nlGA~Vil~G~~~de 172 (457)
T KOG1250|consen 152 K---IQRCRNLGATVILSGEDWDE 172 (457)
T ss_pred H---HHHHhccCCEEEEecccHHH
Confidence 6 44455557777777776433
No 261
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=23.42 E-value=3.8e+02 Score=24.58 Aligned_cols=37 Identities=22% Similarity=0.285 Sum_probs=23.7
Q ss_pred chHHHHHHHHhCCCeEEEEcC------C-------cHHHHHHHHHHhCCC
Q 013069 173 DSAETIRRALSLGLGVKMITG------D-------QLAIAKETGRRLGMG 209 (450)
Q Consensus 173 ~~~~~I~~l~~~Gi~v~mlTG------D-------~~~~a~~ia~~lgi~ 209 (450)
|+.-++..+++.|.+|.-++- + +.+.+..+|+.+|++
T Consensus 11 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgip 60 (194)
T cd01994 11 DSCYALYRALEEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIP 60 (194)
T ss_pred HHHHHHHHHHHcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCc
Confidence 444556666677776554431 1 456778888888885
No 262
>PF07287 DUF1446: Protein of unknown function (DUF1446); InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length. The function of this family is unknown.
Probab=23.07 E-value=3.7e+02 Score=27.49 Aligned_cols=40 Identities=25% Similarity=0.337 Sum_probs=31.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc-----HHHHHHHHHHhCCC
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQ-----LAIAKETGRRLGMG 209 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~-----~~~a~~ia~~lgi~ 209 (450)
..++....+..+++.||+|+.-+|-- ...+.+++++.|+.
T Consensus 56 ~~~~L~~~L~~~~~~gIkvI~NaGg~np~~~a~~v~eia~e~Gl~ 100 (362)
T PF07287_consen 56 FVRDLRPLLPAAAEKGIKVITNAGGLNPAGCADIVREIARELGLS 100 (362)
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHHHHhcCCC
Confidence 45578889999999999999888765 35667788888885
No 263
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=22.88 E-value=84 Score=26.02 Aligned_cols=27 Identities=22% Similarity=0.113 Sum_probs=23.5
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHH
Q 013069 171 IHDSAETIRRALSLGLGVKMITGDQLA 197 (450)
Q Consensus 171 r~~~~~~I~~l~~~Gi~v~mlTGD~~~ 197 (450)
-+++.++++.+++.|.+++.+|+....
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~~s 85 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVVGS 85 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 457999999999999999999998653
No 264
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=22.68 E-value=2.3e+02 Score=27.04 Aligned_cols=94 Identities=16% Similarity=0.081 Sum_probs=60.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChh
Q 013069 169 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 248 (450)
Q Consensus 169 ~lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 248 (450)
..-+|+..+++..+..|+++++-+.+....-+-+-...+= .++.+....|-+.+--
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~------------------------gdl~~y~~gyfDt~iG 178 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDA------------------------GDLRKYISGYFDTTIG 178 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCc------------------------chHHHHhhhhhhcccc
Confidence 4568899999999999999999998877644333211110 0111111222222222
Q ss_pred hH------HHHHHHHhhcCCEEEEecCCCCChHhHhhCCeeEEe
Q 013069 249 HK------YEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 286 (450)
Q Consensus 249 ~K------~~iV~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa~ 286 (450)
.| ..|-+.+.....-+++.-|-.+-+.|.+.||+=..+
T Consensus 179 ~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l 222 (254)
T KOG2630|consen 179 LKVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGL 222 (254)
T ss_pred ceehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceee
Confidence 22 345566666667899999999999999999875544
No 265
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=22.54 E-value=9.7e+02 Score=25.76 Aligned_cols=69 Identities=17% Similarity=0.225 Sum_probs=50.7
Q ss_pred chHHHHHHHHhCCCeEEEEcCCcH-HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHH
Q 013069 173 DSAETIRRALSLGLGVKMITGDQL-AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKY 251 (450)
Q Consensus 173 ~~~~~I~~l~~~Gi~v~mlTGD~~-~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~ 251 (450)
|+..+|..+++.+-++.+++=.+. ..+..++.-+++.- ..+.-.++++=.
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~i-----------------------------~~~~~~~~~e~~ 135 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLDI-----------------------------VQRSYVTEEDAR 135 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce-----------------------------EEEEecCHHHHH
Confidence 577788888887778877776664 45666777777642 346777888888
Q ss_pred HHHHHHhhcCCEEEEecCCC
Q 013069 252 EIVKHLQARNHICGMIGNGV 271 (450)
Q Consensus 252 ~iV~~lq~~g~~v~~iGDG~ 271 (450)
..|+.+++.|.. +.+||+.
T Consensus 136 ~~~~~l~~~G~~-~viG~~~ 154 (526)
T TIGR02329 136 SCVNDLRARGIG-AVVGAGL 154 (526)
T ss_pred HHHHHHHHCCCC-EEECChH
Confidence 999999999865 4568884
No 266
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=22.47 E-value=1.3e+02 Score=28.67 Aligned_cols=38 Identities=21% Similarity=0.195 Sum_probs=34.2
Q ss_pred chHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 013069 173 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 210 (450)
Q Consensus 173 ~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 210 (450)
-.++.|.+|++.|+.|+=++-|.-.+=...-+++||..
T Consensus 197 ~l~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 197 ILKNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 34788999999999999999999999999999999963
No 267
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.15 E-value=1.7e+02 Score=28.88 Aligned_cols=66 Identities=21% Similarity=0.241 Sum_probs=37.8
Q ss_pred ceeecChhhHHHHHHHHh--hcCCEEEEecCCCC----ChHhHhh--CCeeEEeccch--HHHhhccCEEecCCCc
Q 013069 241 GFAGVFPEHKYEIVKHLQ--ARNHICGMIGNGVN----DAPALKK--ADIGIAVADAT--DAARSAADIVLTEPGL 306 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq--~~g~~v~~iGDG~N----D~~al~~--AdvGIa~~~~~--~~a~~aaDivl~~~~l 306 (450)
.|.-|+|.-=.++++... -.|..|+.+|-|.. =+.+|.. |.|-++-.... ...-..||+|+..-+-
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVIsAvg~ 211 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASYLKDADVIVSAVGK 211 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHHHhhCCEEEECCCC
Confidence 455667765556665553 24889999999751 1234544 44444443222 2344678888865443
No 268
>cd06167 LabA_like LabA_like proteins. A well conserved group of bacterial proteins with no defined function. LabA, a member from Synechococcus elongatus PCC 7942, has been shown to play a role in cyanobacterial circadian timing. It is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system. In particular, LabA seems necessary for KaiC-dependent repression of gene expression.
Probab=22.13 E-value=3e+02 Score=23.42 Aligned_cols=20 Identities=15% Similarity=0.209 Sum_probs=12.7
Q ss_pred HHHHHHhhcCCEEEEecCCC
Q 013069 252 EIVKHLQARNHICGMIGNGV 271 (450)
Q Consensus 252 ~iV~~lq~~g~~v~~iGDG~ 271 (450)
..++.+++.|..|..+|-..
T Consensus 114 ~~i~~lr~~G~~V~v~~~~~ 133 (149)
T cd06167 114 PLVERLRELGKRVIVVGFEA 133 (149)
T ss_pred HHHHHHHHcCCEEEEEccCc
Confidence 45666666677776666653
No 269
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=21.97 E-value=1e+03 Score=25.78 Aligned_cols=70 Identities=16% Similarity=0.193 Sum_probs=51.3
Q ss_pred chHHHHHHHHhCCCeEEEEcCCcH-HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhccceeecChhhHH
Q 013069 173 DSAETIRRALSLGLGVKMITGDQL-AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKY 251 (450)
Q Consensus 173 ~~~~~I~~l~~~Gi~v~mlTGD~~-~~a~~ia~~lgi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~ 251 (450)
|+..+|..+++.+-++.+++=.+. ..+..++.-+++.- ..+.-.++++=.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i-----------------------------~~~~~~~~~e~~ 145 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRI-----------------------------EQRSYVTEEDAR 145 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce-----------------------------EEEEecCHHHHH
Confidence 577788888888778888877664 45556777777642 346677888888
Q ss_pred HHHHHHhhcCCEEEEecCCCC
Q 013069 252 EIVKHLQARNHICGMIGNGVN 272 (450)
Q Consensus 252 ~iV~~lq~~g~~v~~iGDG~N 272 (450)
..|+.+++.|.. +.|||+.-
T Consensus 146 ~~v~~lk~~G~~-~vvG~~~~ 165 (538)
T PRK15424 146 GQINELKANGIE-AVVGAGLI 165 (538)
T ss_pred HHHHHHHHCCCC-EEEcCchH
Confidence 999999999865 45688754
No 270
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.55 E-value=7e+02 Score=24.49 Aligned_cols=67 Identities=22% Similarity=0.264 Sum_probs=38.3
Q ss_pred ceeecChhhHHHHHHHHhh--cCCEEEEecCCCC-C---hHhHhh--CCeeEEeccc--hHHHhhccCEEecCCCch
Q 013069 241 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVN-D---APALKK--ADIGIAVADA--TDAARSAADIVLTEPGLN 307 (450)
Q Consensus 241 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG~N-D---~~al~~--AdvGIa~~~~--~~~a~~aaDivl~~~~l~ 307 (450)
.|.-|+|.-=.++++..+- .|..|+.+|-|.. - +.+|.. |.|-++-... -...-..||+++..-+-.
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~AvGkp 211 (281)
T PRK14183 135 GFVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIVGVGKP 211 (281)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCcc
Confidence 3556667555555555442 4889999999832 1 235544 4444444322 223346899998754433
No 271
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=21.05 E-value=41 Score=31.04 Aligned_cols=79 Identities=10% Similarity=0.152 Sum_probs=53.8
Q ss_pred HHHHHhcchhhhhhceecCCCCcC--CCCCCcEEEEeccCCCCCCcchHHHHHHHHhCCCe--EEEEcCCcHHHHHHHHH
Q 013069 129 NKFAERGLRSLAVAYQEVPEGSKE--SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLG--VKMITGDQLAIAKETGR 204 (450)
Q Consensus 129 ~~~a~~Glr~l~vA~~~~~~~~~~--~~e~~~~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~--v~mlTGD~~~~a~~ia~ 204 (450)
.-|...|++|+.+..+- |.++.. -.+.+..++|+-....+-.+..++.|+.+++.|.. +.++=|-...+ ...++
T Consensus 106 ~~l~~~G~~vi~LG~~v-p~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~~~-~~~~~ 183 (197)
T TIGR02370 106 TMLRANGFDVIDLGRDV-PIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGAPVT-QDWAD 183 (197)
T ss_pred HHHHhCCcEEEECCCCC-CHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEChhcC-HHHHH
Confidence 34567899998887542 322111 11345578999999899899999999999999875 55444444443 45788
Q ss_pred HhCCC
Q 013069 205 RLGMG 209 (450)
Q Consensus 205 ~lgi~ 209 (450)
++|-+
T Consensus 184 ~~gad 188 (197)
T TIGR02370 184 KIGAD 188 (197)
T ss_pred HhCCc
Confidence 88764
No 272
>PRK13670 hypothetical protein; Provisional
Probab=21.00 E-value=3.3e+02 Score=28.09 Aligned_cols=97 Identities=13% Similarity=0.133 Sum_probs=63.0
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHh---CCCeEEEEcCCc----------HHHHHHHHHHhCCCCCCCCCccccCCchhh
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALS---LGLGVKMITGDQ----------LAIAKETGRRLGMGTNMYPSSALSGQDRDE 225 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~---~Gi~v~mlTGD~----------~~~a~~ia~~lgi~~~~~~~~~l~~~~~~~ 225 (450)
..+|+|+=.||+-.|=...|+++++ .|..+++++|+- ...-..++..+|++-
T Consensus 2 k~~GIIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qrg~p~i~~~~~R~~~a~~~GvD~--------------- 66 (388)
T PRK13670 2 KVTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGEPAIVDKWTRAKMALENGVDL--------------- 66 (388)
T ss_pred ceeEEEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCCCCCCCCCHHHHHHHHHHcCCCE---------------
Confidence 5689999999999999999988875 477777777762 233334555555531
Q ss_pred hhhcCChhHHhhhccceeecChhhHH-HHHHHHhhcCCEEEEecCCCCChHhHhh
Q 013069 226 SIVALPVDELIEKADGFAGVFPEHKY-EIVKHLQARNHICGMIGNGVNDAPALKK 279 (450)
Q Consensus 226 ~~~~~~~~~~~~~~~v~a~~~P~~K~-~iV~~lq~~g~~v~~iGDG~ND~~al~~ 279 (450)
++..--.|+..+|++=. ..|+.|...|-..+.+|....|...|+.
T Consensus 67 ---------vielpf~~a~~sae~F~~~aV~iL~~l~v~~lv~G~e~g~~~~L~~ 112 (388)
T PRK13670 67 ---------VVELPFLYSVQSADFFAEGAVSILDALGVDSLVFGSESGDIEDFQK 112 (388)
T ss_pred ---------EEEeCCchHhCCHHHHHHhHHHHHHHcCCCEEEEcCCCCCHHHHHH
Confidence 11110126666776533 3455665567778889988888766654
No 273
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=20.83 E-value=5.1e+02 Score=22.57 Aligned_cols=35 Identities=20% Similarity=0.333 Sum_probs=28.2
Q ss_pred HHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 013069 175 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 209 (450)
Q Consensus 175 ~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 209 (450)
.+.=+.|++.|+..+++.||.......+++++|+.
T Consensus 56 ~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~ 90 (165)
T PF00875_consen 56 ADLQESLRKLGIPLLVLRGDPEEVLPELAKEYGAT 90 (165)
T ss_dssp HHHHHHHHHTTS-EEEEESSHHHHHHHHHHHHTES
T ss_pred HHHHHHHHhcCcceEEEecchHHHHHHHHHhcCcC
Confidence 33445667889999999999999988999999975
No 274
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=20.82 E-value=2.7e+02 Score=27.17 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=25.7
Q ss_pred HHHHHhhcCCEEEEecCCC-CChHhHhhCCeeEEe
Q 013069 253 IVKHLQARNHICGMIGNGV-NDAPALKKADIGIAV 286 (450)
Q Consensus 253 iV~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIa~ 286 (450)
+++.+......++||||+. .|+.+=+.+++.-.+
T Consensus 199 al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~L 233 (269)
T COG0647 199 ALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLL 233 (269)
T ss_pred HHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEE
Confidence 3444544455899999995 899999999988555
No 275
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=20.78 E-value=1e+02 Score=22.39 Aligned_cols=25 Identities=28% Similarity=0.376 Sum_probs=18.1
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcH
Q 013069 172 HDSAETIRRALSLGLGVKMITGDQL 196 (450)
Q Consensus 172 ~~~~~~I~~l~~~Gi~v~mlTGD~~ 196 (450)
++-++.++.|.++|++|-|.|-+..
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~eF 26 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYSEF 26 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HHHH
T ss_pred cHHHHHHHHHHHCCCeEEecCcHHH
Confidence 5668899999999999999886543
No 276
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=20.76 E-value=2e+02 Score=26.58 Aligned_cols=28 Identities=14% Similarity=0.191 Sum_probs=24.2
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHH
Q 013069 171 IHDSAETIRRALSLGLGVKMITGDQLAI 198 (450)
Q Consensus 171 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~ 198 (450)
-+++.++++.+|+.|.+++.+||.....
T Consensus 122 s~~v~~a~~~Ak~~G~~vI~IT~~~~s~ 149 (196)
T PRK10886 122 SRDIVKAVEAAVTRDMTIVALTGYDGGE 149 (196)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 4778999999999999999999976543
No 277
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=20.62 E-value=4.2e+02 Score=25.61 Aligned_cols=27 Identities=22% Similarity=0.356 Sum_probs=16.7
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCCh
Q 013069 248 EHKYEIVKHLQARNHICGMIGNGVNDA 274 (450)
Q Consensus 248 ~~K~~iV~~lq~~g~~v~~iGDG~ND~ 274 (450)
..-.+.++.+++....-.++|-|+++.
T Consensus 186 ~~~~~~i~~vk~~~~~pv~vGfGI~~~ 212 (258)
T PRK13111 186 ADLAELVARLKAHTDLPVAVGFGISTP 212 (258)
T ss_pred ccHHHHHHHHHhcCCCcEEEEcccCCH
Confidence 344556777776545555678888553
No 278
>cd00537 MTHFR Methylenetetrahydrofolate reductase (MTHFR). 5,10-Methylenetetrahydrofolate is reduced to 5-methyltetrahydrofolate by methylenetetrahydrofolate reductase, a cytoplasmic, NAD(P)-dependent enzyme. 5-methyltetrahydrofolate is utilized by methionine synthase to convert homocysteine to methionine. The enzymatic mechanism is a ping-pong bi-bi mechanism, in which NAD(P)+ release precedes the binding of methylenetetrahydrofolate and the acceptor is free FAD. The family includes the 5,10-methylenetetrahydrofolate reductase EC:1.7.99.5 from prokaryotes and methylenetetrahydrofolate reductase EC: 1.5.1.20 from eukaryotes. The bacterial enzyme is a homotetramer and NADH is the preferred reductant while the eukaryotic enzyme is a homodimer and NADPH is the preferred reductant. In humans, there are several clinically significant mutations in MTHFR that result in hyperhomocysteinemia, which is a risk factor for the development of cardiovascular disease.
Probab=20.55 E-value=1.1e+02 Score=29.62 Aligned_cols=39 Identities=18% Similarity=0.171 Sum_probs=33.4
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHhCCCe-EEEEcCCcHH
Q 013069 159 QFIGLIPLFDPPIHDSAETIRRALSLGLG-VKMITGDQLA 197 (450)
Q Consensus 159 ~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~-v~mlTGD~~~ 197 (450)
..+--+...|.-+.+..+.+..++.+|++ +.++|||.+.
T Consensus 60 ~~i~Hlt~r~~n~~~l~~~L~~~~~~Gi~~iL~l~GD~~~ 99 (274)
T cd00537 60 EPIPHLTCRDRNRIELQSILLGAHALGIRNILALRGDPPK 99 (274)
T ss_pred CeeeecccCCCCHHHHHHHHHHHHHCCCCeEEEeCCCCCC
Confidence 55666777888888999999999999996 9999999885
No 279
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=20.37 E-value=1.6e+02 Score=34.03 Aligned_cols=39 Identities=15% Similarity=0.160 Sum_probs=30.2
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCC
Q 013069 170 PIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGM 208 (450)
Q Consensus 170 lr~~~~~~I~~l~~~-Gi~v~mlTGD~~~~a~~ia~~lgi 208 (450)
+-+++.++++.|.+. +..|+++||+...........+++
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L 662 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDM 662 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCc
Confidence 336778888888764 678999999999988877655543
No 280
>PRK13938 phosphoheptose isomerase; Provisional
Probab=20.34 E-value=1e+02 Score=28.52 Aligned_cols=29 Identities=21% Similarity=0.213 Sum_probs=24.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHH
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAI 198 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~ 198 (450)
--+++.++++.+++.|++++.+||.....
T Consensus 125 ~t~~vi~a~~~Ak~~G~~vI~iT~~~~s~ 153 (196)
T PRK13938 125 NSMSVLRAAKTARELGVTVVAMTGESGGQ 153 (196)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 35788999999999999999999976543
No 281
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=20.26 E-value=78 Score=24.70 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=26.8
Q ss_pred EeccCCCCC-CcchHHHHHHHHhCCCeEEEEcCCcH
Q 013069 162 GLIPLFDPP-IHDSAETIRRALSLGLGVKMITGDQL 196 (450)
Q Consensus 162 G~i~l~D~l-r~~~~~~I~~l~~~Gi~v~mlTGD~~ 196 (450)
..+.++-+= +....+.++.|+++|+++...|.+..
T Consensus 42 v~i~ie~~~~~~~~~~i~~~L~~~G~~~~~~~~~~~ 77 (85)
T cd04906 42 IFVGVSVANGAEELAELLEDLKSAGYEVVDLSDDEL 77 (85)
T ss_pred EEEEEEeCCcHHHHHHHHHHHHHCCCCeEECCCCHH
Confidence 445556555 77889999999999999988776543
No 282
>PLN02151 trehalose-phosphatase
Probab=20.07 E-value=1e+02 Score=31.40 Aligned_cols=33 Identities=9% Similarity=0.042 Sum_probs=27.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH
Q 013069 170 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETG 203 (450)
Q Consensus 170 lr~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia 203 (450)
+-++..++|+.|. .+..|.++||+.......+.
T Consensus 121 ~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 153 (354)
T PLN02151 121 MSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFV 153 (354)
T ss_pred CCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHc
Confidence 5578899999998 45799999999998877665
Done!