Query 013070
Match_columns 450
No_of_seqs 230 out of 1551
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 03:38:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013070.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013070hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1un8_A Dihydroxyacetone kinase 100.0 2E-129 8E-134 1032.3 43.6 411 1-445 73-490 (552)
2 3ct4_A PTS-dependent dihydroxy 100.0 2E-104 6E-109 793.7 26.4 261 1-266 70-332 (332)
3 1oi2_A Hypothetical protein YC 100.0 2E-104 8E-109 796.8 24.4 267 1-268 78-365 (366)
4 2iu4_A DHA-DHAQ, dihydroxyacet 100.0 2E-104 6E-109 794.2 22.9 263 1-268 66-331 (336)
5 3pnl_B PTS-dependent dihydroxy 100.0 2.2E-36 7.5E-41 288.1 15.5 142 302-446 4-145 (211)
6 3cr3_A PTS-dependent dihydroxy 100.0 2.3E-35 7.9E-40 277.3 16.6 135 303-445 3-137 (192)
7 3nyi_A FAT acid-binding protei 76.0 9.6 0.00033 37.2 9.0 95 12-120 66-165 (297)
8 3fdj_A DEGV family protein; GU 75.5 12 0.0004 36.2 9.3 94 12-120 61-156 (278)
9 3pl5_A SMU_165, putative uncha 74.4 9.4 0.00032 37.8 8.5 199 13-240 98-308 (320)
10 3jr7_A Uncharacterized EGV fam 74.1 9.4 0.00032 37.3 8.4 197 12-236 81-288 (298)
11 2dt8_A DEGV family protein; fa 63.7 24 0.00083 33.9 8.8 92 12-121 62-157 (280)
12 1pzx_A Hypothetical protein AP 58.2 33 0.0011 33.2 8.6 97 12-122 63-164 (289)
13 3ct6_A PTS-dependent dihydroxy 49.6 23 0.0008 30.3 5.3 79 15-119 45-125 (131)
14 3fys_A Protein DEGV; fatty aci 44.9 1E+02 0.0036 30.1 9.9 93 12-120 96-192 (315)
15 1mgp_A Hypothetical protein TM 44.4 96 0.0033 30.3 9.5 93 12-121 89-187 (313)
16 3b48_A Uncharacterized protein 42.7 43 0.0015 28.6 5.9 77 15-113 50-129 (135)
17 3djh_A Macrophage migration in 38.9 17 0.00059 29.9 2.7 40 190-229 57-96 (114)
18 3lup_A DEGV family protein; PS 38.8 78 0.0027 30.4 7.8 194 12-245 65-281 (285)
19 4dh4_A MIF; trimer, isomerase; 35.7 17 0.00059 29.8 2.2 40 190-229 58-97 (114)
20 1uiz_A MIF, macrophage migrati 34.5 22 0.00076 29.0 2.7 40 190-229 58-97 (115)
21 1hfo_A Migration inhibitory fa 33.6 23 0.00079 28.7 2.6 40 190-229 57-96 (113)
22 3b64_A Macrophage migration in 33.5 21 0.00072 29.0 2.4 41 190-230 58-98 (112)
23 3fwu_A Macrophage migration in 32.8 22 0.00074 30.5 2.4 41 190-230 79-119 (133)
24 2os5_A Acemif; macrophage migr 32.2 33 0.0011 28.2 3.4 41 189-229 57-97 (119)
25 2yxd_A Probable cobalt-precorr 30.4 1.3E+02 0.0045 24.9 7.1 56 3-66 102-157 (183)
26 3qit_A CURM TE, polyketide syn 29.7 55 0.0019 28.4 4.7 33 187-225 25-57 (286)
27 4fbl_A LIPS lipolytic enzyme; 28.7 57 0.0019 29.9 4.8 40 188-242 51-90 (281)
28 3fwt_A Macrophage migration in 27.6 20 0.00067 30.7 1.2 41 190-230 79-119 (133)
29 2xcz_A Possible ATLS1-like lig 27.0 26 0.00089 28.6 1.8 40 190-229 58-97 (115)
30 3t5s_A Gilaa.00834.A, macropha 26.7 21 0.0007 30.7 1.2 41 190-230 79-119 (135)
31 2lnd_A De novo designed protei 26.2 1.2E+02 0.004 24.3 5.4 51 149-212 23-73 (112)
32 3dkr_A Esterase D; alpha beta 25.6 76 0.0026 27.1 4.8 35 185-225 19-53 (251)
33 3sty_A Methylketone synthase 1 25.5 72 0.0025 27.8 4.7 34 186-225 10-43 (267)
34 2bz1_A GTP cyclohydrolase II; 25.4 31 0.0011 31.8 2.2 56 4-59 53-143 (196)
35 2wkb_A Macrophage migration in 25.0 28 0.00095 29.0 1.7 40 190-229 58-97 (125)
36 3rm3_A MGLP, thermostable mono 24.6 82 0.0028 27.7 4.9 35 185-225 37-71 (270)
37 3ihu_A Transcriptional regulat 24.6 91 0.0031 28.1 5.3 61 161-237 16-83 (222)
38 4f0j_A Probable hydrolytic enz 23.8 81 0.0028 28.0 4.7 34 186-225 44-77 (315)
39 1tqh_A Carboxylesterase precur 23.6 1.1E+02 0.0037 27.1 5.6 42 186-242 14-55 (247)
40 3pe6_A Monoglyceride lipase; a 23.1 82 0.0028 27.6 4.5 34 186-225 40-73 (303)
41 3lub_A Putative creatinine ami 22.2 1.2E+02 0.0041 28.6 5.8 59 151-225 83-142 (254)
42 3gx1_A LIN1832 protein; APC633 20.3 1.7E+02 0.0057 24.7 5.7 77 17-116 49-125 (130)
43 2aal_A Malonate semialdehyde d 20.1 65 0.0022 26.8 3.0 39 190-229 67-105 (131)
No 1
>1un8_A Dihydroxyacetone kinase; transferase; HET: MYY; 2.5A {Citrobacter freundii} SCOP: a.208.1.1 c.119.1.2 PDB: 1un9_A*
Probab=100.00 E-value=2.4e-129 Score=1032.29 Aligned_cols=411 Identities=45% Similarity=0.678 Sum_probs=376.4
Q ss_pred CcceeccCCccCCCCHHHHHHHHHhccCCCCeEEEEeecccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 013070 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (450)
Q Consensus 1 mL~aav~G~vFaSPs~~~i~~ai~~v~~~~Gvl~iv~NYtGD~lnFglA~e~a~~~G~~v~~v~v~DDva~~~~~~~~gR 80 (450)
||||||||+||||||++||++|||++++++|||+|||||||||||||||+|+|+++||+|++|+|+||||++++ +||
T Consensus 73 ml~aav~G~vFaSPs~~~i~~ai~a~~~g~Gvl~ivkNYtGD~lnF~~A~e~a~~~gi~v~~v~v~DDva~~~~---~~R 149 (552)
T 1un8_A 73 MLTAAVCGDVFASPSVDAVLTAIQAVTGEAGCLLIVKNYTGDRLNFGLAAEKARRLGYNVEMLIVGDDISLPDN---KHP 149 (552)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCCTTCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCTTC---SSC
T ss_pred ccceeeecCcCCCCCHHHHHHHHHhhcCCCCEEEEecccHHHHhhHHHHHHHHHhcCCcEEEEEecCcccCCCC---CCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999864 899
Q ss_pred cccchhhhHHHHHHHHHHcCCCHHHHHHHHHHHHhhhccccccccccccCCCCCCC-CcCCCceEEeccccCCCCccccc
Q 013070 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSD-RLGPGKMELGLGIHGEPGAAVAD 159 (450)
Q Consensus 81 RGlaG~v~v~KiaGA~A~~G~~L~ev~~~~~~~~~~~~tigval~~c~~Pg~~~~~-~l~~~e~E~G~GiHgEpG~~~~~ 159 (450)
||+|||||||||+||+||+|+||+||+++++++++|++||||+|++||+|+++|+| +|++||||||||||||||++|.+
T Consensus 150 RGvaGtv~v~KiaGAaAe~G~~L~ev~~~a~~~~~~~~s~gval~~ctvP~~~~~f~~l~~~e~E~G~GiHGEpG~~~~~ 229 (552)
T 1un8_A 150 RGIAGTILVHKIAGYFAERGYNLATVLREAQYAASNTFSLGVALSSCHLPQETDAAPRHHPGHAELGMGIHGEPGASVID 229 (552)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEEEEECCCCSSCCSSSCCBCTTCEEETCCTTCCCCSEEES
T ss_pred CchhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhhceEEEEEcCCccCCCCCCCcccCCCCceEeccccCCCCCccCCC
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEeee--ccccccC
Q 013070 160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG--SFMTSLD 237 (450)
Q Consensus 160 ~~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~G--~~~TSld 237 (450)
++++++++++|+++|+++ ++++ ++|+|||||||+||++|||++++++.++|+++ | +|+|+| +||||||
T Consensus 230 ~~~a~~~~~~l~~~ll~~----~~~~--~~v~~lvN~lG~t~~~El~i~~~~v~~~L~~~-g---~~~~vG~~~~~Tsld 299 (552)
T 1un8_A 230 TQNSAQVVNLMVDKLLAA----LPET--GRLAVMINNLGGVSVAEMAIITRELASSPLHS-R---IDWLIGPASLVTALD 299 (552)
T ss_dssp CCBHHHHHHHHHHHHHHH----SCSS--CCEEEEEEECBCSCHHHHHHHHHHHHTSTTGG-G---EEEEEEEECSSCCTT
T ss_pred CCCHHHHHHHHHHHHHhh----CCCc--CcEEEEEeCCCCCCHHHHHHHHHHHHHHHHHc-C---CeeeeCCccccCccC
Confidence 999999999999999986 6777 89999999999999999999999999999888 8 999999 9999999
Q ss_pred CCcceEEEeeccHHHHHhhcCcCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCccccCCCcccccchHHHHHHHHHHH
Q 013070 238 MAGFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIP--VPMPPSHSMKSDESLGRPLQLSQQGHVLEVTIEAAA 315 (450)
Q Consensus 238 m~GfSiTll~ld~~l~~~ldap~~ap~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 315 (450)
|+|||||||++|+++++|||+||++|+||+... +... + .+....+ . . ...+.. + ..+++||+.++
T Consensus 300 m~G~SiTll~ld~el~~~ldap~~~~~~~~~~~---~~~~-~~~~~~~~~~-~---~-~~~~~~---~-~~l~~~l~~~a 366 (552)
T 1un8_A 300 MKGFSLTAIVLEESIEKALLTEVETSNWPTPVP---PREI-TCVVSSHASA-R---V-EFQPSA---N-ALVAGIVELVT 366 (552)
T ss_dssp BEEEEEEEEECCTTHHHHHHSCCCCSSCCCCBC---CCCC-CEECCCCCCC-S---C-CCCCBC---C-HHHHHHHHHHH
T ss_pred CCcceEEeecCCHHHHHHhcCCCCCCCCCCccC---cccc-cccccccccc-c---C-CCCcch---h-HHHHHHHHHHH
Confidence 999999999999999999999999999997531 1000 0 0000000 0 0 011111 3 56899999999
Q ss_pred HHHHHhHHhhhhccCCCCCCchhHHHHHHHHHHHHHhhccC--CCCCHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 013070 316 EAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYY--PLNDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYA 393 (450)
Q Consensus 316 ~~li~~e~~Ln~LD~~vGDGD~G~tm~~G~~ai~~~l~~~~--~~~~~~~~l~~i~~a~~~~~GGtSG~Lyg~ff~~~a~ 393 (450)
+.|++++++||+||+++||||||+||++||+++.+.+++ . +..++.++|+.+++.+++.||||||+|||+||+++++
T Consensus 367 ~~l~~~~d~Ln~LD~~VGDGD~GtNM~~G~~av~~~l~~-~~~~~~~~~~~l~~i~~~ll~~~GG~SG~Lyg~~f~~~ak 445 (552)
T 1un8_A 367 ATLSDLETHLNALDAKVGDGDTGSTFAAAAREIASLLHR-QQLPLNNLATLFALIGERLTVVMGGSSGVLMSIFFTAAGQ 445 (552)
T ss_dssp HHHHHTHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHHT-TCSBTTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHh-ccCCCCCHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999973 3 4568999999999999999999999999999999999
Q ss_pred HhhccCCCCCCHHHHHHHHHHHHHHHHHhhCCCCCCcchhhhHHHHHHHHHh
Q 013070 394 KLKASSKSGITSKQWAEALEASIAAVSKYGGATAGYRTMLDALIPAAAVLQE 445 (450)
Q Consensus 394 ~l~~~~~~~l~~~~~a~al~~gl~~i~~~G~A~~GDkTMlDaL~Pa~~al~~ 445 (450)
.++++ ++++ ++|++|++++++||+|+||||||||+|+|+++++++
T Consensus 446 ~l~~~--~~l~-----~al~ag~~~i~~~g~AkpGdkTMLDaL~Paaeal~~ 490 (552)
T 1un8_A 446 KLEQG--ANVV-----EALNTGLAQMKFYGGADEGDRTMIDALQPALTSLLA 490 (552)
T ss_dssp HHHTT--CCHH-----HHHHHHHHHHHHHHCCCTTSSSTHHHHHHHHHHHHH
T ss_pred HhcCC--chHH-----HHHHHHHHHHHHhcCCCCCCCchhhhHHHHHHHHHH
Confidence 99865 3433 999999999999999999999999999999999964
No 2
>3ct4_A PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DHAK; dihydroxyacetone kinase subunit, tranferase; 2.50A {Lactococcus lactis subsp}
Probab=100.00 E-value=1.8e-104 Score=793.70 Aligned_cols=261 Identities=36% Similarity=0.588 Sum_probs=247.6
Q ss_pred CcceeccCCccCCCCHHHHHHHHHhccCCCCeEEEEeecccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 013070 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (450)
Q Consensus 1 mL~aav~G~vFaSPs~~~i~~ai~~v~~~~Gvl~iv~NYtGD~lnFglA~e~a~~~G~~v~~v~v~DDva~~~~~~~~gR 80 (450)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+.+||
T Consensus 70 MLdAAv~G~VFaSPs~~qi~~aikav~~g~GvL~ivkNYtGDvlNF~mAaE~a~~eGi~v~~VvV~DDvA~~~~~~~~gR 149 (332)
T 3ct4_A 70 MLSAAVCGAIFTSPTPDQIYEAIKSADEGAGVLLIIKNYLGDVMNFEMAREMAEMEEIKVEQIIVDDDIAVENSLYTQGR 149 (332)
T ss_dssp SBSEEEEEEETCCCCHHHHHHHHHHHCCSSCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSSSSCTTCSSS
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhcCCcEEEEEeCCcccCCCcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987778999
Q ss_pred cccchhhhHHHHHHHHHHcCCCHHHHHHHHHHHHhhhccccccccccccCC-CCCCCCcCCCceEEeccccCCCCccccc
Q 013070 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD 159 (450)
Q Consensus 81 RGlaG~v~v~KiaGA~A~~G~~L~ev~~~~~~~~~~~~tigval~~c~~Pg-~~~~~~l~~~e~E~G~GiHgEpG~~~~~ 159 (450)
||+|||||||||+|||||+|+||+||+++|+++++|++||||+|++||+|+ ++|+|+|++||||||||||||||++|.+
T Consensus 150 RGvAGtvlv~KIaGAaAe~G~~L~ev~~~a~~~~~~~~SiGval~~ctvP~~g~p~f~l~~~emE~G~GIHGEpG~~r~~ 229 (332)
T 3ct4_A 150 RGVAGTVLVHKILGAAAHQEASLDEIKDLADKVVKNIKTIGLALSAATVPEVGKPGFVLDDNEIEYGVGIHSEPGYRREK 229 (332)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTEEEEEEESSCCCCC----------CCEEEETCCTTSCCCSEEEE
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCcCCCCCCCCCCccCCCceEeccccCCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEeeeccccccCCC
Q 013070 160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMA 239 (450)
Q Consensus 160 ~~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~G~~~TSldm~ 239 (450)
++++++++++|+++|+++ ++++++++|+|||||||+||++|||++++++.++|+++ ||+|+|+|+|+|||||||+
T Consensus 230 ~~~a~el~~~m~~~ll~~----~~~~~gd~v~vlVNgLG~t~~~El~i~~~~v~~~L~~~-gi~v~r~~vG~~~TSldM~ 304 (332)
T 3ct4_A 230 MKTSYELATELVGKLKEE----FKFEAGQKYGILVNGMGATPLMEQFIFMNDVAKLLTEE-NIEILFKKVGNYMTSIDMA 304 (332)
T ss_dssp CCCHHHHHHHHHHHHHHH----HTCCTTCEEEEEEEECBSSCHHHHHHHHHHHHHHHHTT-TCEEEEEEEECSSCCTTBC
T ss_pred CCCHHHHHHHHHHHHHhh----cCcCCCCeEEEEEECCCCcCHHHHHHHHHHHHHHHHHC-CCeEEEEEeeccccccCCC
Confidence 999999999999999986 78889999999999999999999999999999999888 9999999999999999999
Q ss_pred cceEEEeeccH-HHHHhhcCcCCCCCCC
Q 013070 240 GFSISIMKADE-VILKHLDATTKAPHWP 266 (450)
Q Consensus 240 GfSiTll~ld~-~l~~~ldap~~ap~w~ 266 (450)
||||||+++|| ++++|||+||++|+|+
T Consensus 305 G~SiTll~ldd~el~~lldaP~~tp~w~ 332 (332)
T 3ct4_A 305 GLSLTMIKLEDDQWLKNLNEDVKTISWG 332 (332)
T ss_dssp EEEEEEEECCSHHHHHHHTSCCBCSCC-
T ss_pred ccEEEEEECCHHHHHHHhCCCCCCCCCC
Confidence 99999999999 9999999999999994
No 3
>1oi2_A Hypothetical protein YCGT; kinase, dihydroxyacetone kinase; 1.75A {Escherichia coli} SCOP: c.119.1.2 PDB: 1oi3_A 1uod_A* 1uoe_A 3pnl_A* 3pnk_A* 3pno_A 3pnq_A 3pnm_A
Probab=100.00 E-value=2.2e-104 Score=796.80 Aligned_cols=267 Identities=39% Similarity=0.624 Sum_probs=251.1
Q ss_pred CcceeccCCccCCCCHHHHHHHHHhccCCCCeEEEEeecccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 013070 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (450)
Q Consensus 1 mL~aav~G~vFaSPs~~~i~~ai~~v~~~~Gvl~iv~NYtGD~lnFglA~e~a~~~G~~v~~v~v~DDva~~~~~~~~gR 80 (450)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+.+||
T Consensus 78 MLdaAv~G~VFaSPs~~qi~~ai~av~~g~GvL~ivkNYtGDvlNF~mA~E~a~~eGi~v~~Vvv~DDvAv~~~~~~~gR 157 (366)
T 1oi2_A 78 MLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGR 157 (366)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCCSSCEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCBSCTTCSSB
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhcCCcEEEEEecCceecCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987778999
Q ss_pred cccchhhhHHHHHHHHHHcCCCHHHHHHHHHHHHhhhccccccccccccCC-CCCCCCcCCCceEEeccccCCCCccccc
Q 013070 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD 159 (450)
Q Consensus 81 RGlaG~v~v~KiaGA~A~~G~~L~ev~~~~~~~~~~~~tigval~~c~~Pg-~~~~~~l~~~e~E~G~GiHgEpG~~~~~ 159 (450)
||+|||||||||+|||||+|+||+||+++|+++++|++||||||++||+|+ ++|+|+|++||||||||||||||++|.+
T Consensus 158 RGvAGtvlv~KiaGAaAe~G~sL~ev~~~a~~~~~~~~SiGvaL~~ctvP~~g~p~F~l~~~emE~G~GIHGEPG~~r~~ 237 (366)
T 1oi2_A 158 RGVANTVLIEKLVGAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRP 237 (366)
T ss_dssp CCCTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTTEEEEEEEEECC-----------CCTTEEEETCCTTSCCCSEEEE
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCcCCCCCCCCCCccCCCceEeccccCCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc--------------------ccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhh
Q 013070 160 LQPVDVVVSHVLKQILST--------------------ETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLE 219 (450)
Q Consensus 160 ~~~a~~lv~~ml~~ll~~--------------------~~~~~~~~~~~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~ 219 (450)
++|+++++++|+++|+++ +|.|++++++++|+|||||||+||++|||++++++.++|+++
T Consensus 238 ~~sa~elv~~m~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~vLVNgLG~T~~~El~iv~~~v~~~L~~~ 317 (366)
T 1oi2_A 238 FSSLDQTVDEMFDTLLVNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRLTTRCQQA 317 (366)
T ss_dssp CCCHHHHHHHHHHHHHHSCCEEEEEEEEETTTTEEEEEEEEECCCCTTCEEEEEEEECBSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcccccccccccccccccccccccccCCCCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHHC
Confidence 999999999999999986 145689999999999999999999999999999999999888
Q ss_pred cCCeEEEEeeeccccccCCCcceEEEeeccHHHHHhhcCcCCCCCCCCC
Q 013070 220 HGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVG 268 (450)
Q Consensus 220 ~gi~v~r~~~G~~~TSldm~GfSiTll~ld~~l~~~ldap~~ap~w~~~ 268 (450)
||+|+|+|+|+|||||||+|||||||++|+++++|||+||++|+|||+
T Consensus 318 -gi~v~r~~vG~y~TSLdM~G~SiTLl~lddel~~lldaP~~tpa~~~g 365 (366)
T 1oi2_A 318 -GLTIERNLIGAYCTSLDMTGFSITLLKVDDETLALWDAPVHTPALNWG 365 (366)
T ss_dssp -TCEEEEEEEECSSCCTTBEEEEEEEEEECHHHHHHHHSCEESSSCEEC
T ss_pred -CCeEEEEeeecccCCCCCCccEEEEEecCHHHHHHhCCCCCCCcCCCC
Confidence 999999999999999999999999999999999999999999999974
No 4
>2iu4_A DHA-DHAQ, dihydroxyacetone kinase; transferase, CO-activa kinase; HET: HIQ; 1.96A {Lactococcus lactis} PDB: 2iu6_A
Probab=100.00 E-value=1.6e-104 Score=794.15 Aligned_cols=263 Identities=32% Similarity=0.493 Sum_probs=257.4
Q ss_pred CcceeccCCccCCCCHHHHHHHHHhccCCCCeEEEEeecccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 013070 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (450)
Q Consensus 1 mL~aav~G~vFaSPs~~~i~~ai~~v~~~~Gvl~iv~NYtGD~lnFglA~e~a~~~G~~v~~v~v~DDva~~~~~~~~gR 80 (450)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus 66 MLdAAv~G~VFaSPs~~qi~~aikav~~g~GvL~ivkNYtGDvlNF~mAaE~a~~eGi~v~~VvV~DDvA~~~~~~~~gR 145 (336)
T 2iu4_A 66 MLAAAVTGPLFIPPKSKNILKAIRQVNSGKGVFVIIKNFEADLKEFNEAIKEARTEGIDVRYIVSHDDISVNAYNFHKRH 145 (336)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCSSSCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCHHHHHTCCSCC
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhCCCcEEEEEecCceecCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877778999
Q ss_pred cccchhhhHHHHHHHHHHcCCCHHHHHHHHHHHHhhhccccccccccccCCCCCCCCcCCCceEEeccccCCCCcccccC
Q 013070 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADL 160 (450)
Q Consensus 81 RGlaG~v~v~KiaGA~A~~G~~L~ev~~~~~~~~~~~~tigval~~c~~Pg~~~~~~l~~~e~E~G~GiHgEpG~~~~~~ 160 (450)
||+|||||||||+|||||+|+||+||+++|+++++|++||||||++||+|+.+|+|+|++||||||||||||||++|.++
T Consensus 146 RGvAGtvlv~KIaGAaAe~G~~L~ev~~~a~~~~~~~~SiGvaL~~ctvP~~~p~F~l~~~emE~G~GIHGEpG~~r~~~ 225 (336)
T 2iu4_A 146 RGVAGTILLHKILGAFAKEGGSIDEIEQLALSLSPEIYTLGVALAPVHFPHQKTSFVLAEDEVSFGIGIXGEPGYRVEKF 225 (336)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHGGGEEEEEEEEECCEETTTEESSCCCTTEEEESCCCCCCCCSEEEEC
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCccCCCCCCCCccCCCceEecccccCCCCccccCC
Confidence 99999999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCC--CCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEeeeccccccCC
Q 013070 161 QPVDVVVSHVLKQILSTETNYVPIT--RGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDM 238 (450)
Q Consensus 161 ~~a~~lv~~ml~~ll~~~~~~~~~~--~~~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~G~~~TSldm 238 (450)
+++++++++|+++|+++ ++++ ++++|+|||||||+||++|||++++++.++|+++ ||+|+|+|+|+|||||||
T Consensus 226 ~~a~el~~~m~~~ll~~----l~~~~~~gd~v~vlVNgLG~t~~~El~i~~~~v~~~L~~~-gi~v~r~~vG~~~TSLdM 300 (336)
T 2iu4_A 226 EGSERIAIELVNKLKAE----INWQKKANKNYILLVNGLGSTTLMELYSFQYDVMRLLELE-GLSVKFCKVGNLMTSCDM 300 (336)
T ss_dssp CCHHHHHHHHHHHHHHH----HCGGGCSCCEEEEEEEECBSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEEECSSCCTTB
T ss_pred CCHHHHHHHHHHHHHhh----CccccCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHHC-CCeEEEEeeecccCccCC
Confidence 99999999999999986 7887 8999999999999999999999999999999888 999999999999999999
Q ss_pred CcceEEEeeccH-HHHHhhcCcCCCCCCCCC
Q 013070 239 AGFSISIMKADE-VILKHLDATTKAPHWPVG 268 (450)
Q Consensus 239 ~GfSiTll~ld~-~l~~~ldap~~ap~w~~~ 268 (450)
+|||||||++|| ++++|||+||++|+|+..
T Consensus 301 ~G~SiTll~ldd~el~~lldaP~~tpa~~~~ 331 (336)
T 2iu4_A 301 SGISLTLCSVKDPKWLDYLNVPTGAFAWLEH 331 (336)
T ss_dssp EEEEEEEEECCSTHHHHHHHSCCCCTTCCCC
T ss_pred CccEEEEEECCHHHHHHHhcCCCCCcccchh
Confidence 999999999999 999999999999999753
No 5
>3pnl_B PTS-dependent dihydroxyacetone kinase, ADP-bindin DHAL; structural genomics, montreal-kingston bacterial structural initiative, BSGI; HET: ADP; 2.20A {Escherichia coli} SCOP: a.208.1.0 PDB: 2btd_A*
Probab=100.00 E-value=2.2e-36 Score=288.11 Aligned_cols=142 Identities=21% Similarity=0.310 Sum_probs=134.6
Q ss_pred cchHHHHHHHHHHHHHHHHhHHhhhhccCCCCCCchhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhcCCChH
Q 013070 302 QQGHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSG 381 (450)
Q Consensus 302 ~~~~~l~~~l~~~~~~li~~e~~Ln~LD~~vGDGD~G~tm~~G~~ai~~~l~~~~~~~~~~~~l~~i~~a~~~~~GGtSG 381 (450)
.+.+.+++||+.+|+.|+++++|||+||+++||||||+||.+||+++++.+++ .+..++.++|+.+++.+++.|||+||
T Consensus 4 ~~~~~~~~~l~~~~~~l~~~~~~L~~LD~~vGDGD~G~nm~~g~~av~~~l~~-~~~~~~~~~l~~~~~~~~~~~gG~SG 82 (211)
T 3pnl_B 4 LSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPA-IADKDIGFILKNTGMTLLSSVGGASG 82 (211)
T ss_dssp EEHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCSCHHHHHHHHHHHHHHHSGG-GTTSCHHHHHHHHHHHHHTTTCTTHH
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHcCCCcHH
Confidence 46788999999999999999999999999999999999999999999999984 45678999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhhCCCCCCcchhhhHHHHHHHHHhh
Q 013070 382 ILYHIFCKAAYAKLKASSKSGITSKQWAEALEASIAAVSKYGGATAGYRTMLDALIPAAAVLQEV 446 (450)
Q Consensus 382 ~Lyg~ff~~~a~~l~~~~~~~l~~~~~a~al~~gl~~i~~~G~A~~GDkTMlDaL~Pa~~al~~~ 446 (450)
||||+||+++++.++++ ++++.++|+++|+++++.+++||+++||||||||+|+|+++++++.
T Consensus 83 ~L~~~~f~~~a~~l~~~--~~~~~~~~~~al~~a~~~i~~~g~a~~GdkTmlD~l~pa~~a~~~~ 145 (211)
T 3pnl_B 83 PLFGTFFIRAAQATQAR--QSLTLEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQS 145 (211)
T ss_dssp HHHHHHHHHHHHHHCSC--SEEEHHHHHHHHHHHHHHHHHHHCCCTTSSSTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHhcCCCCCCChHHHhHHHHHHHHHHH
Confidence 99999999999999875 6799999999999999999999999999999999999999999864
No 6
>3cr3_A PTS-dependent dihydroxyacetone kinase, ADP- binding subunit DHAL; transient protein-protein complex transferase complex PTS- dependent dihydroxyacetone kinase; HET: ADP; 2.10A {Lactococcus lactis subsp} SCOP: a.208.1.1
Probab=100.00 E-value=2.3e-35 Score=277.27 Aligned_cols=135 Identities=24% Similarity=0.311 Sum_probs=127.4
Q ss_pred chHHHHHHHHHHHHHHHHhHHhhhhccCCCCCCchhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhcCCChHH
Q 013070 303 QGHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSGI 382 (450)
Q Consensus 303 ~~~~l~~~l~~~~~~li~~e~~Ln~LD~~vGDGD~G~tm~~G~~ai~~~l~~~~~~~~~~~~l~~i~~a~~~~~GGtSG~ 382 (450)
+.+.+++||..+++.|+++++|||+||+++||||||+||.+||+++.+.+++ .+..++.++|+.+++.+++.|||||||
T Consensus 3 ~~~~~~~~l~~~~~~l~~~~~~L~~LD~~vGDGD~G~nm~~g~~a~~~~l~~-~~~~~~~~~l~~~~~~~~~~~gG~SG~ 81 (192)
T 3cr3_A 3 TIDTTIEWLGKFNEKIQENKAYLSELDGPIGDGDHGANMARGMSETMKALEV-SNFGNVSEIFKKVAMTLMSKVGGASGP 81 (192)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHTTTTSCSCHHHHHHHHHHHHHHHHHH-CCCSSHHHHHHHHHHHHHHHCCSTHHH
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHhcCCCcHHH
Confidence 4677999999999999999999999999999999999999999999999974 566789999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhhCCCCCCcchhhhHHHHHHHHHh
Q 013070 383 LYHIFCKAAYAKLKASSKSGITSKQWAEALEASIAAVSKYGGATAGYRTMLDALIPAAAVLQE 445 (450)
Q Consensus 383 Lyg~ff~~~a~~l~~~~~~~l~~~~~a~al~~gl~~i~~~G~A~~GDkTMlDaL~Pa~~al~~ 445 (450)
|||+||+++++.+ ++.++|+++|+++++.+++||+++||||||||+|+|+++++++
T Consensus 82 L~~~~f~~~a~~l-------~~~~~~a~al~~~~~~i~~~g~a~~gdkTmlDal~pa~~a~~~ 137 (192)
T 3cr3_A 82 LYGSAFLAMSKTA-------IETLDTSELIYAGLEAIQKRGKAQVGEKTMVDIWSAFLNDLQT 137 (192)
T ss_dssp HHHHHHHHHHHHH-------TTCCCHHHHHHHHHHHHHHHHCCCTTSSSTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-------CCHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHH
Confidence 9999999999998 4556799999999999999999999999999999999999964
No 7
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=75.96 E-value=9.6 Score=37.16 Aligned_cols=95 Identities=12% Similarity=0.105 Sum_probs=66.5
Q ss_pred CCCCHHHHHHHHHhc-cCCCCeEEEE--eecccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCccccchh
Q 013070 12 ASPPVDSILAGIHAV-TGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGT 86 (450)
Q Consensus 12 aSPs~~~i~~ai~~v-~~~~Gvl~iv--~NYtGD~lnFglA~e~a~~~--G~~v~~v~v~DDva~~~~~~~~gRRGlaG~ 86 (450)
+.||+.++.++.+.. ..+..||+|- ..-+|=.=+.-+|+++..++ +.+|.+| | + |.--.|.
T Consensus 66 Sqps~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa~~~~e~~~~~~I~Vi---D------S-----~~~s~g~ 131 (297)
T 3nyi_A 66 SLPSVESYADVFRSFVEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVI---D------S-----KQNTVTQ 131 (297)
T ss_dssp ECCCHHHHHHHHHHHHTTTCCEEEEESCTTTCSHHHHHHHHHHHHHHHCTTCCEEEE---E------C-----SCCHHHH
T ss_pred cCCCHHHHHHHHHHHHHCCCeEEEEECCCcHhHHHHHHHHHHHHHHhhCCCCeEEEE---e------C-----CchHHHH
Confidence 358999999998765 3446677765 45677777788888877554 4444433 2 1 2223344
Q ss_pred hhHHHHHHHHHHcCCCHHHHHHHHHHHHhhhccc
Q 013070 87 ILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTM 120 (450)
Q Consensus 87 v~v~KiaGA~A~~G~~L~ev~~~~~~~~~~~~ti 120 (450)
-++..-|-.++++|.|++||.+..++..+++++.
T Consensus 132 g~~v~~A~~l~~~G~s~~eI~~~l~~~~~~~~~~ 165 (297)
T 3nyi_A 132 ALLIDQFVRMLEDGLSFEQAMSKLDALMASARIF 165 (297)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCEEE
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEE
Confidence 4445557789999999999999999999887765
No 8
>3fdj_A DEGV family protein; GUT microbiome, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE P6G PG4; 1.80A {Eubacterium eligens} SCOP: c.119.1.0
Probab=75.48 E-value=12 Score=36.23 Aligned_cols=94 Identities=9% Similarity=0.089 Sum_probs=64.5
Q ss_pred CCCCHHHHHHHHHhccCCCCeEEEE--eecccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhhhH
Q 013070 12 ASPPVDSILAGIHAVTGPMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILV 89 (450)
Q Consensus 12 aSPs~~~i~~ai~~v~~~~Gvl~iv--~NYtGD~lnFglA~e~a~~~G~~v~~v~v~DDva~~~~~~~~gRRGlaG~v~v 89 (450)
+.||+.++.++.+ +...||+|- ..-+|=.=+.-+|+++..++--+.++.+|+- |.--.|.-++
T Consensus 61 Sqps~~~~~~~f~---~~~~ii~i~iSs~LSGTy~sA~~aa~~~~ee~~~~~I~ViDS------------~~~s~g~g~~ 125 (278)
T 3fdj_A 61 ACPGIDAWLEAFG---DDDEIFVVTITAGMSGTYNSAMAARAVYLEEHPQAKVRVIDS------------KSTGPQMRII 125 (278)
T ss_dssp ECCCHHHHHHHHT---TCSEEEEEESCTTTCSHHHHHHHHHHHHHTTCTTCEEEEEEC------------SSCTHHHHHH
T ss_pred cCCCHHHHHHHHh---cCCcEEEEECCCcHhHHHHHHHHHHHHHHhhCCCCeEEEEcC------------CchhHHHHHH
Confidence 3488888888886 345566665 4456666677888888766522233334332 2223455566
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhhhccc
Q 013070 90 NKIAGAAAAAGLSLADVAAEAKRASEMVGTM 120 (450)
Q Consensus 90 ~KiaGA~A~~G~~L~ev~~~~~~~~~~~~ti 120 (450)
..-|-.++++|.|++||.+..++..+++++.
T Consensus 126 v~~A~~~~~~G~s~~eI~~~l~~~~~~~~~~ 156 (278)
T 3fdj_A 126 LEQLQQMIEEGKKFEEIDGAIDAYMQKTRLF 156 (278)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcceEE
Confidence 6667789999999999999999999887765
No 9
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=74.40 E-value=9.4 Score=37.81 Aligned_cols=199 Identities=15% Similarity=0.117 Sum_probs=107.7
Q ss_pred CCCHHHHHHHHHhc-cCCCCeEEEE--eecccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCccccchhh
Q 013070 13 SPPVDSILAGIHAV-TGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (450)
Q Consensus 13 SPs~~~i~~ai~~v-~~~~Gvl~iv--~NYtGD~lnFglA~e~a~~~--G~~v~~v~v~DDva~~~~~~~~gRRGlaG~v 87 (450)
.||+.++.++.+.. ..+..||+|- ..-+|=.=+.-+|+++..++ +.+|.+ |+- +.--.|.-
T Consensus 98 qPs~~~~~~~f~~l~~~g~~Ii~I~iSS~LSGTy~sA~~Aa~~~~e~~~~~~I~V--iDS------------~~~s~g~g 163 (320)
T 3pl5_A 98 QVNVGQFESYFRQSAENGQEVLYIAFSSVLSGTYQSAVMARDIVLEEYPQASIEI--VDT------------LAATGGEG 163 (320)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECCTTTCTHHHHHHHHHHHHHHHCTTCCEEE--EEC------------CCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEecCchHhHHHHHHHHHHHHHHhhCCCCeEEE--EcC------------CchHHHHH
Confidence 58999999998765 3446677765 44677666778888887654 444443 321 22234455
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHHHhhhcccccc--ccccccCCCC-CCCCcCCCceEEeccccCC-CCc--ccccCC
Q 013070 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVA--LSVCTLPGQV-TSDRLGPGKMELGLGIHGE-PGA--AVADLQ 161 (450)
Q Consensus 88 ~v~KiaGA~A~~G~~L~ev~~~~~~~~~~~~tigva--l~~c~~Pg~~-~~~~l~~~e~E~G~GiHgE-pG~--~~~~~~ 161 (450)
++..-|-.++++|+|++||.+..++..+++.+.=+- |..=.-=|+= +.--+=.+-+-|=-=+|=+ -|. -..+..
T Consensus 164 ~lv~~Aa~l~~~G~s~eeI~~~le~~~~~~~~~f~v~~L~yL~kGGRIs~~~a~iG~lL~IKPIl~~~~dG~l~~~~KvR 243 (320)
T 3pl5_A 164 YLAMLAAQAREEGKSLKETKELILDVGPRLRTFFLVDNLYHLMRGGRLSKTSAIVGSLVNIKPLLWLDASGKLVPIAKLR 243 (320)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHGGGEEEEEECSCSHHHHHHTCCC--------CTTEEEEEEECTTSCEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECChHHHHhCCCccHHHHHHHhhhCceEEEEEccCCeEEEEeeec
Confidence 555566789999999999999999999888776321 0000000100 0000000001111111222 232 134556
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC-eEEEEeeeccccccCCCc
Q 013070 162 PVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL-AVERVYTGSFMTSLDMAG 240 (450)
Q Consensus 162 ~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi-~v~r~~~G~~~TSldm~G 240 (450)
+.+..+++|++.+.+. .. ..+ +.+.+. + . .|. +.++.+.|+++++. .+.-..+|.-+.+==.+|
T Consensus 244 g~kka~~~lv~~~~~~----~~---~~~-v~I~h~-~-~--~e~---a~~l~~~l~~~~~~~~i~i~~ig~vIg~H~GpG 308 (320)
T 3pl5_A 244 GRKKGMKEMLKRATAD----VA---HDT-AVVAYA-N-D--SEA---AENLKEQLLANEKIKNVVTLPLGPVISTHVGPN 308 (320)
T ss_dssp SHHHHHHHHHHHHTSS----CC---SSE-EEEEES-S-C--HHH---HHHHHHHHHTSTTCCEEEEEECCHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHHh----cC---CCE-EEEEeC-C-C--HHH---HHHHHHHHHhhcCCCcEEEEEeccEEEEEecCC
Confidence 6678888888887553 22 233 334433 2 2 232 45667777777664 344445565554433443
No 10
>3jr7_A Uncharacterized EGV family protein COG1307; structural genomics, PSI2, MCSG, protein struct initiative; HET: PG6; 2.00A {Ruminococcus gnavus}
Probab=74.14 E-value=9.4 Score=37.33 Aligned_cols=197 Identities=14% Similarity=0.166 Sum_probs=106.9
Q ss_pred CCCCHHHHHHHHHhccCCCCeEEEE--eecccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCccccchhh
Q 013070 12 ASPPVDSILAGIHAVTGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (450)
Q Consensus 12 aSPs~~~i~~ai~~v~~~~Gvl~iv--~NYtGD~lnFglA~e~a~~~--G~~v~~v~v~DDva~~~~~~~~gRRGlaG~v 87 (450)
+.||+.++.++.+. ....||+|- ..-+|=.=+.-+|+++..++ +.+|. +|+- |.--.|.=
T Consensus 81 Sqps~~~~~~~f~~--~~~~Ii~i~iSs~LSGTy~sA~~Aa~~~~e~~~~~~I~--ViDS------------~~~s~g~g 144 (298)
T 3jr7_A 81 SCPSPERYMESYHC--DAERIYVVTLSAELSGSYNSAVLGKNLYEEEYGEKQIH--VFNS------------RSASVGET 144 (298)
T ss_dssp ECCCHHHHHHHHCS--SCSEEEEEESCTTTCSHHHHHHHHHHHHHHHHCCCEEE--EEEC------------SSCTHHHH
T ss_pred CCCCHHHHHHHHHh--cCCeEEEEECCcchhHHHHHHHHHHHHHHhhCCCCeEE--EECC------------CchhHHHH
Confidence 35899999999884 445566654 44566666777888877654 33433 3322 22224445
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHHHhhhcccccc--ccccccCCC-CCCCCcCCCceEEeccc-cCCCCc--ccccCC
Q 013070 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVA--LSVCTLPGQ-VTSDRLGPGKMELGLGI-HGEPGA--AVADLQ 161 (450)
Q Consensus 88 ~v~KiaGA~A~~G~~L~ev~~~~~~~~~~~~tigva--l~~c~~Pg~-~~~~~l~~~e~E~G~Gi-HgEpG~--~~~~~~ 161 (450)
++..-|-.++++|.|++||.+..++..+++++.=+- |..=.-=|+ .+.--+=.+-+-|=-=+ +.+-|. -..+..
T Consensus 145 ~lv~~Aa~l~~~G~s~eeI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~~~G~l~~~~KvR 224 (298)
T 3jr7_A 145 LIALKVQQCEKAGMTFEEVVESVECYIEEQHTYFVLENLDTLRKNGRLTGIKSLVAGALNIKPIMGSTPQGTICQKEKAR 224 (298)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCEEEECSCCHHHHHTTCSTTCCC--CCCTTEEEEEEECTTSCEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhCeEEEEeCChHHHHhCCeehHHHHHHHhhcCcEEEEEEccCCeEEEeeecC
Confidence 555666789999999999999999999988776331 111110111 00000001111222223 234453 234556
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC-eEEEEeeecccccc
Q 013070 162 PVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL-AVERVYTGSFMTSL 236 (450)
Q Consensus 162 ~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi-~v~r~~~G~~~TSl 236 (450)
+.+..+++|++.+.+. .. ......+.+.+. + .+ |. +.++.+.|+++++. ++.-..+|.-+.+-
T Consensus 225 g~kka~~~l~~~~~~~----~~-~~~~~~v~I~h~-~-~~--e~---a~~l~~~l~~~~~~~~i~i~~~g~vig~H 288 (298)
T 3jr7_A 225 GMKKALVKMADCVAAD----VV-NAGDKILAIAHC-N-CE--ER---AKEVQRLLKERFAVKSSFIVDTSGISTVY 288 (298)
T ss_dssp SHHHHHHHHHHHHHHH----CC-SGGGCEEEEEES-S-CH--HH---HHHHHHHHHHHCCCSEEEEEECCHHHHHH
T ss_pred CHHHHHHHHHHHHHHH----hc-cCCCcEEEEEeC-C-CH--HH---HHHHHHHHHhhcCCCcEEEEEEccEEEEE
Confidence 6677888888887664 21 112233333332 2 22 22 34556666776653 44445566655543
No 11
>2dt8_A DEGV family protein; fatty acid binding, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: PLM; 1.48A {Thermus thermophilus}
Probab=63.70 E-value=24 Score=33.92 Aligned_cols=92 Identities=20% Similarity=0.116 Sum_probs=56.4
Q ss_pred CCCCHHHHHHHHHhccC-CCCeEEEEe--ecccccccHHHHHHHHHhc-CCcEEEEEecccccCCCCCCCCCccccchhh
Q 013070 12 ASPPVDSILAGIHAVTG-PMGCLLIVT--NYTGDRLNFGLAAEQAKSE-GYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (450)
Q Consensus 12 aSPs~~~i~~ai~~v~~-~~Gvl~iv~--NYtGD~lnFglA~e~a~~~-G~~v~~v~v~DDva~~~~~~~~gRRGlaG~v 87 (450)
+.||+.++.++.+.... +..||+|-- .-+|= |. ++.+|+.+ ..+| .+|+- |..-.|.-
T Consensus 62 Sqps~~~~~~~f~~l~~~~~~ii~i~lSs~LSGT---y~-sA~~aa~~~~~~I--~ViDS------------~~~s~g~g 123 (280)
T 2dt8_A 62 SQPSPEDFARVYREALEEADHVLSLHISGKLSGT---VQ-SAELAAQEFPGRV--TVVDT------------QAASLGVG 123 (280)
T ss_dssp ECCCHHHHHHHHHHHTTSCSEEEEEESCTTTCTH---HH-HHHHHHTTSTTSE--EEEEC------------SCCTHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEECCCcHhHH---HH-HHHHHHHhCCCCE--EEECC------------chhHHHHH
Confidence 35899999999977643 344555432 12332 22 33334332 2122 22221 22234555
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHHHhhhcccc
Q 013070 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMG 121 (450)
Q Consensus 88 ~v~KiaGA~A~~G~~L~ev~~~~~~~~~~~~tig 121 (450)
++..-|-.++++|+|++||.+..++..+++++.=
T Consensus 124 ~~v~~a~~l~~~G~s~eei~~~l~~~~~~~~~~f 157 (280)
T 2dt8_A 124 MMVLRAKELLEEGQSLEAVLAELERLRRDHFVRF 157 (280)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHSCEEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEE
Confidence 6666677889999999999999999998887753
No 12
>1pzx_A Hypothetical protein APC36103; structural genomics, two domains containing mixed alpha/beta structures, PSI; HET: PLM; 2.00A {Geobacillus stearothermophilus} SCOP: c.119.1.1
Probab=58.16 E-value=33 Score=33.17 Aligned_cols=97 Identities=12% Similarity=0.073 Sum_probs=64.5
Q ss_pred CCCCHHHHHHHHHhc-cCCCCeEEEEe--ecccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCccccchh
Q 013070 12 ASPPVDSILAGIHAV-TGPMGCLLIVT--NYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGT 86 (450)
Q Consensus 12 aSPs~~~i~~ai~~v-~~~~Gvl~iv~--NYtGD~lnFglA~e~a~~~--G~~v~~v~v~DDva~~~~~~~~gRRGlaG~ 86 (450)
+.||+.++.++.+.. ..+..||+|-- .-+|=.=+.-+|+++..++ +.+|. +|+= |..-.|.
T Consensus 63 Sqps~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa~~~~ee~~~~~I~--ViDS------------~~~s~g~ 128 (289)
T 1pzx_A 63 AQPSPLAMKELFLPYAKENRPCLYIAFSSKLSGTYQTAMAVRSELLDEYPEFRLT--IIDS------------KCASLGQ 128 (289)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCEEEEECCTTTCSHHHHHHHHHHHHHHHSTTCCEE--EEEC------------CCCHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEECCCchhHHHHHHHHHHHhhHhhCCCCeEE--EEcC------------chhhHHH
Confidence 458999999998765 44456766643 3455555666777765432 44443 2221 2223455
Q ss_pred hhHHHHHHHHHHcCCCHHHHHHHHHHHHhhhccccc
Q 013070 87 ILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGV 122 (450)
Q Consensus 87 v~v~KiaGA~A~~G~~L~ev~~~~~~~~~~~~tigv 122 (450)
-++..-|-.++++|+|++||.+..++..+++++.=+
T Consensus 129 g~~v~~A~~l~~~G~s~eeI~~~l~~~~~~~~~~f~ 164 (289)
T 1pzx_A 129 GLAVMKAVELAKQNTPYNLLCETIESYCRHMEHIFT 164 (289)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCEEEEE
Confidence 566666778899999999999999999998887643
No 13
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=49.57 E-value=23 Score=30.32 Aligned_cols=79 Identities=16% Similarity=0.245 Sum_probs=51.7
Q ss_pred CHHHHHHHHHhccCCCCeEEEEeecccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhhhHHHHHH
Q 013070 15 PVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAG 94 (450)
Q Consensus 15 s~~~i~~ai~~v~~~~Gvl~iv~NYtGD~lnFglA~e~a~~~G~~v~~v~v~DDva~~~~~~~~gRRGlaG~v~v~KiaG 94 (450)
..++|.++|+.++ +.|||+++== -|=.+|-.++.+..+ -+|+++ ..| +|.-..-
T Consensus 45 ~~~~i~~ai~~~~-~dgVlvltDL-Ggsp~N~~~al~~~~---~~v~vi------NlP---------------mvega~~ 98 (131)
T 3ct6_A 45 SFDRVMNAIEENE-ADNLLTFFDL-GSARMNLDLVSEMTD---KELTIF------NVP---------------LIEGAYT 98 (131)
T ss_dssp CHHHHHHHHHHSS-CSEEEEEESS-GGGHHHHHHHHHTCS---SEEEEC------CSC---------------HHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCEEEEEeC-CCChHHHHHHHHhcC---CCEEEE------Ehh---------------HHHHHHH
Confidence 4788999999988 6788887654 666777777766432 256554 222 3333332
Q ss_pred H--HHHcCCCHHHHHHHHHHHHhhhcc
Q 013070 95 A--AAAAGLSLADVAAEAKRASEMVGT 119 (450)
Q Consensus 95 A--~A~~G~~L~ev~~~~~~~~~~~~t 119 (450)
| .+..|.+++|+.+.+.....+-||
T Consensus 99 aa~~~~~~~~l~el~~~~~~~~~~~~~ 125 (131)
T 3ct6_A 99 ASALLEAGATFEAIKEQLEKMLIEKRS 125 (131)
T ss_dssp HHHHHHTTCCHHHHHHHHGGGCCCCCC
T ss_pred HHHHhhcCCCHHHHHHHHHHHHhCccc
Confidence 2 346799999998888776555443
No 14
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=44.86 E-value=1e+02 Score=30.12 Aligned_cols=93 Identities=13% Similarity=0.125 Sum_probs=56.9
Q ss_pred CCCCHHHHHHHHHhccC-CCCeEEEE--eecccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhhh
Q 013070 12 ASPPVDSILAGIHAVTG-PMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTIL 88 (450)
Q Consensus 12 aSPs~~~i~~ai~~v~~-~~Gvl~iv--~NYtGD~lnFglA~e~a~~~G~~v~~v~v~DDva~~~~~~~~gRRGlaG~v~ 88 (450)
+-||+.++.++.+.... ...||+|- ..-+|=.=+.-+|+++. .+. ++.+|+- |.--.|.-+
T Consensus 96 SqPs~~~~~~~fe~l~~~~~~Ii~I~iSS~LSGTy~sA~~Aa~~~--~~~--~I~ViDS------------~~~s~g~g~ 159 (315)
T 3fys_A 96 SQPPIGELVALYEELGKSYDAVISIHLSSGISGTFSSAAAADSMV--DNI--DVYPFDS------------EISCLAQGF 159 (315)
T ss_dssp ECCCHHHHHHHHHHHTTTCSEEEEEESCTTTCSHHHHHHHGGGGC--SSC--EEEEEEC------------SSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEeCCCcHhHHHHHHHHHHHhC--CCC--CEEEECC------------chhHHHHHH
Confidence 45899999999977654 44566554 23344322222332221 132 2223321 223345556
Q ss_pred HHHHHHHHHHcCC-CHHHHHHHHHHHHhhhccc
Q 013070 89 VNKIAGAAAAAGL-SLADVAAEAKRASEMVGTM 120 (450)
Q Consensus 89 v~KiaGA~A~~G~-~L~ev~~~~~~~~~~~~ti 120 (450)
+..-|-.++++|. |++||.+..++..+++.+.
T Consensus 160 lv~~Aa~l~~~G~~s~eeI~~~l~~~~~~~~~~ 192 (315)
T 3fys_A 160 YALKAAELIKNGASSPEDIIKELEEMKKTVRAY 192 (315)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHhccEEE
Confidence 6666778999999 9999999999998877665
No 15
>1mgp_A Hypothetical protein TM841; two domain structure with mixed alpha/beta structures in BOTH domains, structural genomics; HET: PLM; 2.00A {Thermotoga maritima} SCOP: c.119.1.1 PDB: 1vpv_A*
Probab=44.40 E-value=96 Score=30.34 Aligned_cols=93 Identities=12% Similarity=0.131 Sum_probs=56.5
Q ss_pred CCCCHHHHHHHHHhcc-CCC-CeEEEEe--ecccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhh
Q 013070 12 ASPPVDSILAGIHAVT-GPM-GCLLIVT--NYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (450)
Q Consensus 12 aSPs~~~i~~ai~~v~-~~~-Gvl~iv~--NYtGD~lnFglA~e~a~~~G~~v~~v~v~DDva~~~~~~~~gRRGlaG~v 87 (450)
+.||+.++.++.+... .+. .||+|-- .-+|=.=+.-+|+++. +.+ +.+|+= +.--.|.-
T Consensus 89 SqPs~~~~~e~f~~l~~~g~d~Ii~I~iSs~LSGTy~sA~~Aa~~~---~~~--I~ViDS------------~~~s~g~g 151 (313)
T 1mgp_A 89 SQPSVEDFKKRYLKYKEEDYDVVLVLTLSSKLSGTYNSAVLASKEV---DIP--VYVVDT------------LLASGAIP 151 (313)
T ss_dssp ECCCHHHHHHHHHHHHHTTCSEEEEEESCTTTCSHHHHHHHHHHHS---SSC--EEEEEC------------SCCGGGTH
T ss_pred CCcCHHHHHHHHHHHHHcCCCeEEEEECCccHhHHHHHHHHHHhcC---CCe--EEEEeC------------CcchHHHH
Confidence 4589999999997663 332 4655542 2233333334444332 223 223322 12224445
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHHHh--hhcccc
Q 013070 88 LVNKIAGAAAAAGLSLADVAAEAKRASE--MVGTMG 121 (450)
Q Consensus 88 ~v~KiaGA~A~~G~~L~ev~~~~~~~~~--~~~tig 121 (450)
++..-|-.++++|+|++||.+..++... ++.+.=
T Consensus 152 ~lv~~Aa~l~~~G~s~eeI~~~l~~~~~~~~~~~~f 187 (313)
T 1mgp_A 152 LPARVAREMLENGATIEEVLKKLDERMKNKDFKAIF 187 (313)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhhhCceEEEE
Confidence 5556677889999999999999999999 777653
No 16
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=42.73 E-value=43 Score=28.58 Aligned_cols=77 Identities=21% Similarity=0.214 Sum_probs=52.0
Q ss_pred CHHHHHHHHHhccCCCCeEEEEeecccccccHHHHHHHHHhc-CCcEEEEEecccccCCCCCCCCCccccchhhhHHHHH
Q 013070 15 PVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSE-GYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIA 93 (450)
Q Consensus 15 s~~~i~~ai~~v~~~~Gvl~iv~NYtGD~lnFglA~e~a~~~-G~~v~~v~v~DDva~~~~~~~~gRRGlaG~v~v~Kia 93 (450)
..++|.++|+.++.+.|||+++== -|=.+|-.++.+....+ .-+|+++ ..| +|.+..
T Consensus 50 ~~~~i~~ai~~~~~~dgVlvltDL-Ggsp~N~~~~~~~~~~~~~~~v~vv------NlP---------------mv~~~l 107 (135)
T 3b48_A 50 DPMKIIDTINEADSDREFLIFADL-GSAVLSSELAFDMLEEDQQKHYHLV------DAP---------------LVEGAF 107 (135)
T ss_dssp CHHHHHHHHHHSCSSCEEEEEECS-HHHHHHHHHHHHHSCHHHHTTEEEC------CSC---------------HHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEEeC-CCChhHHHHHHHHhcccccCCEEEE------EHH---------------HHHHHH
Confidence 588999999999998999987754 66667777777765432 2256653 221 455554
Q ss_pred HH--HHHcCCCHHHHHHHHHHH
Q 013070 94 GA--AAAAGLSLADVAAEAKRA 113 (450)
Q Consensus 94 GA--~A~~G~~L~ev~~~~~~~ 113 (450)
-| .+..|.+++|+.+.+...
T Consensus 108 ~aa~~~~~~~~l~el~~~a~~~ 129 (135)
T 3b48_A 108 ASAITAGVSDDLTQILAEAQNA 129 (135)
T ss_dssp HHHHHHC-CCCHHHHHHHHHTC
T ss_pred HHHHHhhcCCCHHHHHHHHHHH
Confidence 43 345699999998877653
No 17
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=38.87 E-value=17 Score=29.89 Aligned_cols=40 Identities=13% Similarity=0.085 Sum_probs=35.7
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEee
Q 013070 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (450)
Q Consensus 190 v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~ 229 (450)
..+-|..+|++++-+---++..+.+.|++++|+.+.|+|+
T Consensus 57 a~~~v~sig~~~~~~n~~~s~~i~~~l~~~Lgi~~~riyI 96 (114)
T 3djh_A 57 ALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYI 96 (114)
T ss_dssp EEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEccCCCHHHHHHHHHHHHHHHHHHhCcCcceEEE
Confidence 4556889999999777889999999999999999999997
No 18
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=38.81 E-value=78 Score=30.40 Aligned_cols=194 Identities=12% Similarity=0.086 Sum_probs=101.1
Q ss_pred CCCCHHHHHHHHHhccC-C-CCeEEEE--eecccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhh
Q 013070 12 ASPPVDSILAGIHAVTG-P-MGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (450)
Q Consensus 12 aSPs~~~i~~ai~~v~~-~-~Gvl~iv--~NYtGD~lnFglA~e~a~~~G~~v~~v~v~DDva~~~~~~~~gRRGlaG~v 87 (450)
+.||+.++.++.+.... + ..||+|- ..-+|=.=+.-+|+|+. .+.+| .|=| -|..-.|.-
T Consensus 65 Sqps~~~~~~~f~~l~~~g~d~ii~i~iSs~LSGTy~sA~~a~~~~--~~~~I---~ViD-----------S~~~s~g~g 128 (285)
T 3lup_A 65 SQPSLAELDDLLCQLEKEGYTHVLGLFIAAGISGFWQNIQFLIEEH--PNLTI---AFPD-----------TKITSAPQG 128 (285)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEEECCSCGGGCTHHHHHTTHHHHC--TTSEE---ECCC-----------CCCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEeCCCchhHHHHHHHHHHHhC--CCCCE---EEEc-----------CCchHHHHH
Confidence 45899999999876643 3 3466554 33444333333333321 12222 2212 133345556
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHHHhhhcccccc--cccc--------------ccCCCCCCCCcC-CCceEEecccc
Q 013070 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVA--LSVC--------------TLPGQVTSDRLG-PGKMELGLGIH 150 (450)
Q Consensus 88 ~v~KiaGA~A~~G~~L~ev~~~~~~~~~~~~tigva--l~~c--------------~~Pg~~~~~~l~-~~e~E~G~GiH 150 (450)
++..-|-.++++|+|++||.+..++..+++++.=+- |..= ++=.=+|..++. +|+++.
T Consensus 129 ~~v~~A~~l~~~G~s~eeI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~~~G~l~~----- 203 (285)
T 3lup_A 129 NLVRNALMCSREGMDFDVIVNKIQSQIEKIEGFIVVNDLNHLVKGGRLSNGSAIIGNLLSIKPVLHFNEEGKIVV----- 203 (285)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHTTCEEEEECSCTHHHHHHTCBTTHHHHHHHHTTSCCEEEECTTSCEEE-----
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEEEECChHHHhhCCCccHHHHHHHHhhCcEEEEEEccCceEEE-----
Confidence 666667789999999999999999999887765321 0000 000112333443 444442
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcC-CeEEEEee
Q 013070 151 GEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHG-LAVERVYT 229 (450)
Q Consensus 151 gEpG~~~~~~~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~g-i~v~r~~~ 229 (450)
..+..+.+..+++|++.+.+. .. ....++ .+... + .+ |. +.++.+.|++++. .++....+
T Consensus 204 ------~~KvRg~kka~~~l~~~~~~~----~~-~~~~~v-~i~h~-~-~~--e~---a~~l~~~l~~~~~~~~i~i~~i 264 (285)
T 3lup_A 204 ------YEKVRTEKKALKRLAEIVKEM----TA-DGEYDI-AIIHS-R-AQ--DK---AEQLYNLLAKAGLKDDLEIVSF 264 (285)
T ss_dssp ------EECCSSHHHHHHHHHHHHHHH----GG-GSCEEE-EEEES-S-CH--HH---HHHHHHHHHHTTCGGGEEEEEC
T ss_pred ------eeecCCHHHHHHHHHHHHHHh----hc-CCCcEE-EEEeC-C-CH--HH---HHHHHHHHHhhCCCCeEEEEEE
Confidence 345556667778888777553 11 112233 33332 2 22 22 3345555555543 24455566
Q ss_pred eccccccCCCc-ceEEE
Q 013070 230 GSFMTSLDMAG-FSISI 245 (450)
Q Consensus 230 G~~~TSldm~G-fSiTl 245 (450)
|.-+.+==.+| +.|..
T Consensus 265 g~vig~H~Gpg~igi~~ 281 (285)
T 3lup_A 265 GGVIATHLGEGAVAFGI 281 (285)
T ss_dssp CHHHHHHHCTTCEEEEE
T ss_pred CcEEEEEecCCeEEEEE
Confidence 66655444444 34443
No 19
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=35.70 E-value=17 Score=29.78 Aligned_cols=40 Identities=15% Similarity=0.230 Sum_probs=35.3
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEee
Q 013070 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (450)
Q Consensus 190 v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~ 229 (450)
..+-|..+|+.+...---+...+.+.|++.+|+.+.|+|+
T Consensus 58 a~v~i~~ig~~~~e~~~~l~~~i~~~l~~~Lgi~~~riyI 97 (114)
T 4dh4_A 58 AFIRVASIGGITSSTNCKIAAALSAACERHLGVPKNRIYT 97 (114)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEEcCCCHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 4556889999999777789999999999999999999997
No 20
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=34.50 E-value=22 Score=28.98 Aligned_cols=40 Identities=15% Similarity=0.091 Sum_probs=35.6
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEee
Q 013070 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (450)
Q Consensus 190 v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~ 229 (450)
+.+-|..+||.+..+.-.+++++.+.|.+.+|+.+.|+|+
T Consensus 58 ~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (115)
T 1uiz_A 58 AVCSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYI 97 (115)
T ss_dssp EEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcceEEE
Confidence 4556888999999888899999999999999999999887
No 21
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=33.65 E-value=23 Score=28.73 Aligned_cols=40 Identities=15% Similarity=0.187 Sum_probs=35.5
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEee
Q 013070 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (450)
Q Consensus 190 v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~ 229 (450)
+.+=|..+||.+..+.-.+++++.+.|.+.+|+.+.|+|+
T Consensus 57 ~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I 96 (113)
T 1hfo_A 57 AFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLGIPKNRMYI 96 (113)
T ss_dssp EEEEEEESSSCSHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcCeEEE
Confidence 4556888999998888899999999999999999999887
No 22
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=33.53 E-value=21 Score=29.02 Aligned_cols=41 Identities=15% Similarity=0.239 Sum_probs=36.1
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEeee
Q 013070 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (450)
Q Consensus 190 v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~G 230 (450)
+.+=|...||.+..+.-.+++++.+.|++.+|+.+.|+|+=
T Consensus 58 ~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (112)
T 3b64_A 58 ACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVL 98 (112)
T ss_dssp EEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 45668899999988888999999999999999999998873
No 23
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=32.79 E-value=22 Score=30.46 Aligned_cols=41 Identities=15% Similarity=0.239 Sum_probs=36.0
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEeee
Q 013070 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (450)
Q Consensus 190 v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~G 230 (450)
+.+-|..+|+.+..+--.+++.+.+.|++++||.+.|+|+=
T Consensus 79 a~v~i~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~riyI~ 119 (133)
T 3fwu_A 79 ACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVL 119 (133)
T ss_dssp EEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 45568899999887778899999999999999999999984
No 24
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=32.22 E-value=33 Score=28.19 Aligned_cols=41 Identities=17% Similarity=0.142 Sum_probs=36.1
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEee
Q 013070 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (450)
Q Consensus 189 ~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~ 229 (450)
-+.+-|.-+||.+..+.-.+++++.+.|.+.+|+.+.|+|+
T Consensus 57 ~~~i~I~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (119)
T 2os5_A 57 VAVIKVESIGALSADDNIRHTQKITQFCQDTLKLPKDKVII 97 (119)
T ss_dssp CEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred eEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 35566888999998888899999999999999999999887
No 25
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=30.40 E-value=1.3e+02 Score=24.91 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=39.3
Q ss_pred ceeccCCccCCCCHHHHHHHHHhccCCCCeEEEEeecccccccHHHHHHHHHhcCCcEEEEEec
Q 013070 3 TAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVG 66 (450)
Q Consensus 3 ~aav~G~vFaSPs~~~i~~ai~~v~~~~Gvl~iv~NYtGD~lnFglA~e~a~~~G~~v~~v~v~ 66 (450)
|.+++..+ +...+++..++.+ +.|.+++......+ +.-..+..+..|++++.+-+.
T Consensus 102 D~i~~~~~---~~~~~~l~~~~~~--~gG~l~~~~~~~~~---~~~~~~~l~~~g~~~~~~~~~ 157 (183)
T 2yxd_A 102 NKAFIGGT---KNIEKIIEILDKK--KINHIVANTIVLEN---AAKIINEFESRGYNVDAVNVF 157 (183)
T ss_dssp SEEEECSC---SCHHHHHHHHHHT--TCCEEEEEESCHHH---HHHHHHHHHHTTCEEEEEEEE
T ss_pred cEEEECCc---ccHHHHHHHHhhC--CCCEEEEEeccccc---HHHHHHHHHHcCCeEEEEEee
Confidence 45555555 6778888888887 88888887743332 445677778889988887543
No 26
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=29.72 E-value=55 Score=28.39 Aligned_cols=33 Identities=24% Similarity=0.249 Sum_probs=26.7
Q ss_pred CCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEE
Q 013070 187 GNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVE 225 (450)
Q Consensus 187 ~~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~ 225 (450)
+.+.+|++.++|+.+.. ++.+.+.|.++ |+.+.
T Consensus 25 ~~~~vv~~hG~~~~~~~-----~~~~~~~l~~~-G~~v~ 57 (286)
T 3qit_A 25 EHPVVLCIHGILEQGLA-----WQEVALPLAAQ-GYRVV 57 (286)
T ss_dssp TSCEEEEECCTTCCGGG-----GHHHHHHHHHT-TCEEE
T ss_pred CCCEEEEECCCCcccch-----HHHHHHHhhhc-CeEEE
Confidence 45789999999998874 45677888888 88877
No 27
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=28.69 E-value=57 Score=29.89 Aligned_cols=40 Identities=18% Similarity=0.255 Sum_probs=29.7
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEeeeccccccCCCcce
Q 013070 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFS 242 (450)
Q Consensus 188 ~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~G~~~TSldm~GfS 242 (450)
..-|||+-|+|+.+.. ++.+.+.|.++ |++|. .+|++|+-
T Consensus 51 ~~~VlllHG~~~s~~~-----~~~la~~La~~-Gy~Vi---------a~Dl~GhG 90 (281)
T 4fbl_A 51 RIGVLVSHGFTGSPQS-----MRFLAEGFARA-GYTVA---------TPRLTGHG 90 (281)
T ss_dssp SEEEEEECCTTCCGGG-----GHHHHHHHHHT-TCEEE---------ECCCTTSS
T ss_pred CceEEEECCCCCCHHH-----HHHHHHHHHHC-CCEEE---------EECCCCCC
Confidence 3448999999998853 45677888888 99887 56666553
No 28
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=27.61 E-value=20 Score=30.68 Aligned_cols=41 Identities=15% Similarity=0.259 Sum_probs=35.1
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEeee
Q 013070 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (450)
Q Consensus 190 v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~G 230 (450)
+.+-|..+|+.+..+--.++.++.+.|++.+||.+.|+|+=
T Consensus 79 a~v~v~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~rvyI~ 119 (133)
T 3fwt_A 79 AYVRVESWGEYAPSKPKMMTPRIAAAITKECGIPAERIYVF 119 (133)
T ss_dssp EEEEEEEEECCCTHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 45557778888887888899999999999999999999974
No 29
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=26.98 E-value=26 Score=28.57 Aligned_cols=40 Identities=13% Similarity=0.259 Sum_probs=35.4
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEee
Q 013070 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (450)
Q Consensus 190 v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~ 229 (450)
+.+=|..+||.+..+.-.+++++.+.|.+.+|+.+.|+|+
T Consensus 58 ~~v~i~~~~g~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (115)
T 2xcz_A 58 CYVEVKSIGALDGSRTQEVSELVCGHIEQNLGIPADRIYI 97 (115)
T ss_dssp EEEEEEESSCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 4555788999999999999999999999999999999887
No 30
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=26.65 E-value=21 Score=30.67 Aligned_cols=41 Identities=15% Similarity=0.118 Sum_probs=31.6
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEeee
Q 013070 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (450)
Q Consensus 190 v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~G 230 (450)
+.+-|..+|+.+.-+--.++..+.+.|++.+||.+.|+|+=
T Consensus 79 a~v~i~sig~~t~e~n~~~s~~i~~~l~~~Lgi~~~riyI~ 119 (135)
T 3t5s_A 79 CFVDFYCIGVISQAKNPSISAAITGCLTQHFKVKPERVYIS 119 (135)
T ss_dssp EEEEEECCC-----CCHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEEEEEEEeccCCchHHHHHHHHHHHhcccCccEEEEE
Confidence 45568899999888888899999999999999999999983
No 31
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=26.21 E-value=1.2e+02 Score=24.33 Aligned_cols=51 Identities=18% Similarity=0.341 Sum_probs=31.7
Q ss_pred ccCCCCcccccCCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHH
Q 013070 149 IHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKA 212 (450)
Q Consensus 149 iHgEpG~~~~~~~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnLG~ts~lEl~~~~~~~ 212 (450)
-|+=||.......+..++ ..+++.+. +.|...+|+||+ .|+-..+-+-+++
T Consensus 23 khnypgryirtatssqdi-rdiiksmk---------dngkplvvfvng---asqndvnefqnea 73 (112)
T 2lnd_A 23 KHNYPGRYIRTATSSQDI-RDIIKSMK---------DNGKPLVVFVNG---ASQNDVNEFQNEA 73 (112)
T ss_dssp HHHSCTTTEEEECSHHHH-HHHHHHHT---------TCCSCEEEEECS---CCHHHHHHHHHHH
T ss_pred hcCCCCceeeeccchhhH-HHHHHHHH---------hcCCeEEEEecC---cccccHHHHHHHH
Confidence 388899875555555554 33333332 357889999997 5665555444444
No 32
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=25.64 E-value=76 Score=27.07 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=28.0
Q ss_pred CCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEE
Q 013070 185 TRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVE 225 (450)
Q Consensus 185 ~~~~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~ 225 (450)
..+.+.+|++.++|+.+.. ++.+.+.|.++ |+.+.
T Consensus 19 ~~~~~~vv~~HG~~~~~~~-----~~~~~~~l~~~-G~~v~ 53 (251)
T 3dkr_A 19 EGTDTGVVLLHAYTGSPND-----MNFMARALQRS-GYGVY 53 (251)
T ss_dssp CCSSEEEEEECCTTCCGGG-----GHHHHHHHHHT-TCEEE
T ss_pred CCCCceEEEeCCCCCCHHH-----HHHHHHHHHHC-CCEEE
Confidence 4567899999999999862 46777888888 88876
No 33
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=25.52 E-value=72 Score=27.77 Aligned_cols=34 Identities=12% Similarity=-0.011 Sum_probs=26.8
Q ss_pred CCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEE
Q 013070 186 RGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVE 225 (450)
Q Consensus 186 ~~~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~ 225 (450)
...+.+|++.|+|+.+.. ...+.+.|.++ |++|.
T Consensus 10 ~~~~~vvllHG~~~~~~~-----~~~~~~~l~~~-g~~v~ 43 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAWC-----WYKIVALMRSS-GHNVT 43 (267)
T ss_dssp CCCCEEEEECCTTCCGGG-----GHHHHHHHHHT-TCEEE
T ss_pred CCCCeEEEECCCCCCcch-----HHHHHHHHHhc-CCeEE
Confidence 356799999999998763 45777888887 88876
No 34
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A
Probab=25.42 E-value=31 Score=31.81 Aligned_cols=56 Identities=23% Similarity=0.237 Sum_probs=42.2
Q ss_pred eeccCCccCCC---CHHHHHHHHHhccC-CCCeEEEEeec-------------------------------ccccccHHH
Q 013070 4 AAICGDVFASP---PVDSILAGIHAVTG-PMGCLLIVTNY-------------------------------TGDRLNFGL 48 (450)
Q Consensus 4 aav~G~vFaSP---s~~~i~~ai~~v~~-~~Gvl~iv~NY-------------------------------tGD~lnFgl 48 (450)
-+..||||-|. .-.|+-+|++.+.. +.|||+....= ..|-=+||+
T Consensus 53 ec~tgDvfgs~rcdcg~qL~~Al~~I~~~G~GVlvyLrqegrgigL~~kl~ay~lqd~g~dt~~an~~lg~~~d~R~ygi 132 (196)
T 2bz1_A 53 ECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTL 132 (196)
T ss_dssp CCHHHHTSCCSSCSHHHHHHHHHHHHHHHTSEEEEEECCHHHHTCHHHHHHHHHHHHTTCCHHHHHHHTTCCSCCCCTHH
T ss_pred cCChHHHhCCCCCCChHHHHHHHHHHHHhCCEEEEEECCCCcchhHHHHHHHHhhhccCCcccccccccCCCCccccHHH
Confidence 45679999997 46699999999875 56998887421 125568888
Q ss_pred HHHHHHhcCCc
Q 013070 49 AAEQAKSEGYK 59 (450)
Q Consensus 49 A~e~a~~~G~~ 59 (450)
+++..+.-|++
T Consensus 133 gAqIL~dLGV~ 143 (196)
T 2bz1_A 133 CADMFKLLGVN 143 (196)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 88888888875
No 35
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=25.02 E-value=28 Score=29.02 Aligned_cols=40 Identities=18% Similarity=0.201 Sum_probs=30.9
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEee
Q 013070 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (450)
Q Consensus 190 v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~ 229 (450)
+.+=|..+||.+..+.-.+++++.+.|.+.+|+.+.|+|+
T Consensus 58 ~~v~I~~~~g~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (125)
T 2wkb_A 58 CFVRLTSIGGINRSNNSLLADKITKILSNHLSVKPRRVYI 97 (125)
T ss_dssp EEEEEECC-----CTHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEE
Confidence 4566889999999888899999999999999999998887
No 36
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=24.62 E-value=82 Score=27.66 Aligned_cols=35 Identities=23% Similarity=0.296 Sum_probs=28.2
Q ss_pred CCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEE
Q 013070 185 TRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVE 225 (450)
Q Consensus 185 ~~~~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~ 225 (450)
..+.+.+|++.++|+.+.. ++.+.+.|.++ |+.+.
T Consensus 37 ~g~~~~vv~~HG~~~~~~~-----~~~~~~~l~~~-G~~v~ 71 (270)
T 3rm3_A 37 ENGPVGVLLVHGFTGTPHS-----MRPLAEAYAKA-GYTVC 71 (270)
T ss_dssp CCSSEEEEEECCTTCCGGG-----THHHHHHHHHT-TCEEE
T ss_pred CCCCeEEEEECCCCCChhH-----HHHHHHHHHHC-CCEEE
Confidence 3456899999999999874 46778888888 88877
No 37
>3ihu_A Transcriptional regulator, GNTR family; YP_298823.1, DNA binding protein, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.92A {Ralstonia eutropha}
Probab=24.57 E-value=91 Score=28.06 Aligned_cols=61 Identities=18% Similarity=0.273 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHH-------HHHHHHHhhhhhcCCeEEEEeeeccc
Q 013070 161 QPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMI-------AAGKAVPNLQLEHGLAVERVYTGSFM 233 (450)
Q Consensus 161 ~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnLG~ts~lEl~~-------~~~~~~~~L~~~~gi~v~r~~~G~~~ 233 (450)
+-.+.+.+.+.+.|++- .+++|+++ |.-||.- -++++++.|+.. |+-..+...|.|+
T Consensus 16 ~~~~~v~~~l~~~I~~g-----~l~pG~~L----------~E~~La~~lgVSRtpVREAl~~L~~e-Glv~~~~~~G~~V 79 (222)
T 3ihu_A 16 SASDTVFFGIMSGLELG-----TFVPGQRL----------VETDLVAHFGVGRNSVREALQRLAAE-GIVDLQRHRGAVI 79 (222)
T ss_dssp CHHHHHHHHHHHHHHHT-----SSCTTCEE----------CHHHHHHHHTCCHHHHHHHHHHHHHT-TSEEECSTTCEEE
T ss_pred cHHHHHHHHHHHHHHhC-----CCCCCCcc----------CHHHHHHHHCCCHHHHHHHHHHHHHC-CCEEEecCCCeEE
Confidence 34466788888888873 57788874 3333332 578999999999 9988888889999
Q ss_pred cccC
Q 013070 234 TSLD 237 (450)
Q Consensus 234 TSld 237 (450)
+.++
T Consensus 80 ~~~~ 83 (222)
T 3ihu_A 80 RRLS 83 (222)
T ss_dssp CCCC
T ss_pred ecCC
Confidence 8764
No 38
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=23.83 E-value=81 Score=27.99 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=27.3
Q ss_pred CCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEE
Q 013070 186 RGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVE 225 (450)
Q Consensus 186 ~~~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~ 225 (450)
...+++|++.++|+.+.. +..+.+.|.++ |+.+.
T Consensus 44 ~~~p~vv~~hG~~~~~~~-----~~~~~~~l~~~-g~~v~ 77 (315)
T 4f0j_A 44 ANGRTILLMHGKNFCAGT-----WERTIDVLADA-GYRVI 77 (315)
T ss_dssp CCSCEEEEECCTTCCGGG-----GHHHHHHHHHT-TCEEE
T ss_pred CCCCeEEEEcCCCCcchH-----HHHHHHHHHHC-CCeEE
Confidence 456799999999998874 55677888888 88877
No 39
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=23.65 E-value=1.1e+02 Score=27.10 Aligned_cols=42 Identities=19% Similarity=0.278 Sum_probs=30.9
Q ss_pred CCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEeeeccccccCCCcce
Q 013070 186 RGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFS 242 (450)
Q Consensus 186 ~~~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~G~~~TSldm~GfS 242 (450)
.+.+.+||+.|+|+.+.. .+.+.+.|.++ |+++. .+|.+|+-
T Consensus 14 ~~~~~vvllHG~~~~~~~-----~~~~~~~L~~~-g~~vi---------~~D~~GhG 55 (247)
T 1tqh_A 14 AGERAVLLLHGFTGNSAD-----VRMLGRFLESK-GYTCH---------APIYKGHG 55 (247)
T ss_dssp CSSCEEEEECCTTCCTHH-----HHHHHHHHHHT-TCEEE---------ECCCTTSS
T ss_pred CCCcEEEEECCCCCChHH-----HHHHHHHHHHC-CCEEE---------ecccCCCC
Confidence 356789999999998853 45677888877 88887 55665553
No 40
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=23.06 E-value=82 Score=27.63 Aligned_cols=34 Identities=15% Similarity=0.068 Sum_probs=26.5
Q ss_pred CCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEE
Q 013070 186 RGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVE 225 (450)
Q Consensus 186 ~~~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~ 225 (450)
+...++|++.|+|+.+. .++.+.+.|.++ |+.+.
T Consensus 40 ~~~~~vv~~hG~~~~~~-----~~~~~~~~l~~~-g~~v~ 73 (303)
T 3pe6_A 40 TPKALIFVSHGAGEHSG-----RYEELARMLMGL-DLLVF 73 (303)
T ss_dssp CCSEEEEEECCTTCCGG-----GGHHHHHHHHHT-TEEEE
T ss_pred CCCeEEEEECCCCchhh-----HHHHHHHHHHhC-CCcEE
Confidence 34678999999999887 345677888887 88776
No 41
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=22.23 E-value=1.2e+02 Score=28.62 Aligned_cols=59 Identities=12% Similarity=0.220 Sum_probs=38.1
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhc-CCeEE
Q 013070 151 GEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEH-GLAVE 225 (450)
Q Consensus 151 gEpG~~~~~~~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~-gi~v~ 225 (450)
+=||.-.....+.-.++..+++.|.. .|=+-+|+||+=||-. +..+++++. .++ ++.+.
T Consensus 83 ~fPGTisl~~~tl~~~l~di~~sl~~---------~G~rrlvivNgHGGN~---l~~a~~~l~----~~~~~~~v~ 142 (254)
T 3lub_A 83 ELPFCIHTRYATQQAILEDIVSSLHV---------QGFRKLLILSGHGGNN---FKGMIRDLA----FEYPDFLIA 142 (254)
T ss_dssp TSTTCCBCCHHHHHHHHHHHHHHHHH---------TTCCEEEEEESCTTCC---CHHHHHHHH----HHCTTCEEE
T ss_pred CcCCeEEeCHHHHHHHHHHHHHHHHH---------cCCCEEEEEeCCchHH---HHHHHHHHH----HHCCCcEEE
Confidence 45786665555666677777766644 2556799999999987 444455544 443 55554
No 42
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=20.28 E-value=1.7e+02 Score=24.69 Aligned_cols=77 Identities=17% Similarity=0.211 Sum_probs=49.6
Q ss_pred HHHHHHHHhccCCCCeEEEEeecccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCccccchhhhHHHHHHHH
Q 013070 17 DSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAA 96 (450)
Q Consensus 17 ~~i~~ai~~v~~~~Gvl~iv~NYtGD~lnFglA~e~a~~~G~~v~~v~v~DDva~~~~~~~~gRRGlaG~v~v~KiaGA~ 96 (450)
+++.++|+.++.++|||+++== |=-.||.. ...+..+.++++| +=|.. -++.+++ -.
T Consensus 49 ~~i~~~i~~~d~~~GVLiL~Dm--GSp~n~a~--~l~~~~~~~v~vI---~gvnl---------------pmllea~-~~ 105 (130)
T 3gx1_A 49 EKLKQTVVKLNPVKGVLILSDM--GSLTSFGN--ILTEELGIRTKTV---TMVST---------------PVVLEAM-RK 105 (130)
T ss_dssp HHHHHHHHTSCCTTCEEEEECS--GGGGTHHH--HHHHHHCCCEEEE---CSCCH---------------HHHHHHH-HH
T ss_pred HHHHHHHHhhCCCCCEEEEEeC--CCHHHHHH--HHHHhcCCCEEEE---eCCCH---------------HHHHHHH-HH
Confidence 5666778889999999999853 77777643 3333336677664 11222 3444543 23
Q ss_pred HHcCCCHHHHHHHHHHHHhh
Q 013070 97 AAAGLSLADVAAEAKRASEM 116 (450)
Q Consensus 97 A~~G~~L~ev~~~~~~~~~~ 116 (450)
+..+.+|+|+++.++..-.+
T Consensus 106 ~~~~~~l~el~~~~~~~~~~ 125 (130)
T 3gx1_A 106 ASLGRGLEDIYQSCEQLFEN 125 (130)
T ss_dssp HHTTCCHHHHHHHHHHHHHH
T ss_pred hhcCCCHHHHHHHHHHHHHH
Confidence 45566999999888776554
No 43
>2aal_A Malonate semialdehyde decarboxylase; tautomerase superfamily, beta-alpha-beta, homotrimeric, LYAS; 1.65A {Pseudomonas pavonaceae} SCOP: d.80.1.6 PDB: 2aag_A 2aaj_A
Probab=20.13 E-value=65 Score=26.81 Aligned_cols=39 Identities=13% Similarity=0.091 Sum_probs=32.4
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEEee
Q 013070 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (450)
Q Consensus 190 v~vlvNnLG~ts~lEl~~~~~~~~~~L~~~~gi~v~r~~~ 229 (450)
+.+-|. ..|.+.-+.-.+++++.+.|.+.+|+.+.++|+
T Consensus 67 ~~I~i~-~~grt~eqK~~l~~~l~~~l~~~lg~~~~~v~I 105 (131)
T 2aal_A 67 VLLTVI-SRPRSEEQKVCFYKLLTGALERDCGISPDDVIV 105 (131)
T ss_dssp EEEEEE-ESCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEE-eCCCCHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 445577 777888888899999999999988998887776
Done!