Query 013073
Match_columns 450
No_of_seqs 177 out of 1459
Neff 4.7
Searched_HMMs 46136
Date Fri Mar 29 00:07:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013073.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013073hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK13604 luxD acyl transferase 99.4 9.2E-13 2E-17 133.0 13.5 126 2-131 112-250 (307)
2 KOG1552 Predicted alpha/beta h 99.3 9E-13 2E-17 129.7 4.7 120 2-147 134-256 (258)
3 PF00326 Peptidase_S9: Prolyl 99.1 1.8E-10 4E-15 106.9 9.3 129 2-146 68-212 (213)
4 KOG4391 Predicted alpha/beta h 99.1 8.8E-11 1.9E-15 114.1 4.3 127 2-145 153-284 (300)
5 PLN02298 hydrolase, alpha/beta 98.9 2.1E-09 4.5E-14 106.2 8.5 70 79-148 245-322 (330)
6 COG1506 DAP2 Dipeptidyl aminop 98.9 5.7E-09 1.2E-13 113.8 10.4 134 2-146 477-619 (620)
7 KOG1455 Lysophospholipase [Lip 98.9 3.4E-09 7.4E-14 106.8 6.4 68 76-143 237-312 (313)
8 PHA02857 monoglyceride lipase; 98.9 1.8E-08 4E-13 96.2 11.1 66 79-144 203-274 (276)
9 PRK05077 frsA fermentation/res 98.8 3.9E-08 8.4E-13 102.6 14.0 62 82-144 352-413 (414)
10 PLN02652 hydrolase; alpha/beta 98.8 3.6E-08 7.8E-13 102.4 12.1 67 79-145 318-389 (395)
11 PRK10566 esterase; Provisional 98.8 6.2E-08 1.3E-12 91.2 12.4 67 76-144 176-249 (249)
12 PRK11071 esterase YqiA; Provis 98.8 2.1E-08 4.6E-13 93.7 8.0 121 2-141 65-189 (190)
13 PLN02385 hydrolase; alpha/beta 98.7 3.5E-08 7.6E-13 99.0 9.0 67 79-145 273-347 (349)
14 COG1647 Esterase/lipase [Gener 98.7 1.5E-07 3.2E-12 91.8 10.6 136 4-141 91-242 (243)
15 PRK05371 x-prolyl-dipeptidyl a 98.7 4.2E-07 9.1E-12 102.0 15.6 145 2-146 342-522 (767)
16 TIGR01738 bioH putative pimelo 98.6 2.4E-07 5.3E-12 83.3 11.1 64 76-140 179-245 (245)
17 PRK10749 lysophospholipase L2; 98.6 3.9E-07 8.4E-12 91.1 13.1 65 79-143 253-329 (330)
18 PF05448 AXE1: Acetyl xylan es 98.6 2.3E-07 5E-12 94.2 10.7 134 3-143 180-320 (320)
19 TIGR02240 PHA_depoly_arom poly 98.6 2.8E-07 6.2E-12 88.5 9.7 66 78-144 200-267 (276)
20 TIGR02427 protocat_pcaD 3-oxoa 98.6 2.9E-07 6.3E-12 82.8 9.1 65 76-141 184-251 (251)
21 TIGR03611 RutD pyrimidine util 98.5 5.6E-07 1.2E-11 82.2 10.4 64 77-141 190-256 (257)
22 PF12695 Abhydrolase_5: Alpha/ 98.5 3.6E-07 7.8E-12 78.1 8.0 79 2-125 65-145 (145)
23 TIGR03343 biphenyl_bphD 2-hydr 98.5 2E-06 4.2E-11 81.8 13.8 65 76-141 214-281 (282)
24 COG2267 PldB Lysophospholipase 98.5 8.6E-07 1.9E-11 88.9 10.7 65 81-145 224-296 (298)
25 PRK14875 acetoin dehydrogenase 98.4 1.7E-06 3.6E-11 85.8 11.0 63 76-142 305-370 (371)
26 TIGR01836 PHA_synth_III_C poly 98.4 2.2E-06 4.8E-11 86.3 11.6 62 81-142 282-349 (350)
27 TIGR01250 pro_imino_pep_2 prol 98.4 9.5E-06 2E-10 75.0 14.8 64 76-141 222-288 (288)
28 PLN02824 hydrolase, alpha/beta 98.4 3.7E-06 8.1E-11 81.4 12.3 65 78-143 227-294 (294)
29 TIGR01607 PST-A Plasmodium sub 98.3 6.2E-06 1.4E-10 83.2 12.9 62 81-142 264-332 (332)
30 KOG2984 Predicted hydrolase [G 98.3 4.4E-07 9.6E-12 88.0 4.1 136 3-142 119-275 (277)
31 PRK07581 hypothetical protein; 98.3 8E-06 1.7E-10 81.3 12.6 68 76-144 266-337 (339)
32 PF01738 DLH: Dienelactone hyd 98.3 7.8E-06 1.7E-10 76.6 11.7 67 78-144 138-218 (218)
33 PRK06489 hypothetical protein; 98.3 1.4E-05 3.1E-10 80.8 14.3 68 76-144 283-358 (360)
34 PLN02578 hydrolase 98.2 1.4E-05 3.1E-10 80.7 13.5 65 76-141 287-353 (354)
35 PRK03592 haloalkane dehalogena 98.2 7E-06 1.5E-10 79.5 10.8 65 80-144 223-290 (295)
36 PRK10349 carboxylesterase BioH 98.2 1.8E-05 3.9E-10 74.8 13.1 66 76-142 187-255 (256)
37 PRK00870 haloalkane dehalogena 98.2 4.5E-06 9.8E-11 81.4 8.5 64 79-143 233-301 (302)
38 PF02230 Abhydrolase_2: Phosph 98.2 4.1E-06 8.9E-11 78.9 6.9 102 2-144 109-216 (216)
39 PF12697 Abhydrolase_6: Alpha/ 98.2 1.4E-05 3E-10 70.5 9.6 57 76-133 167-226 (228)
40 PLN02679 hydrolase, alpha/beta 98.1 5E-05 1.1E-09 77.2 14.4 65 77-142 284-356 (360)
41 KOG1454 Predicted hydrolase/ac 98.1 1.5E-05 3.2E-10 81.3 10.2 67 76-143 254-324 (326)
42 PLN02442 S-formylglutathione h 98.1 1.2E-05 2.7E-10 79.3 9.2 126 2-144 147-281 (283)
43 PF10142 PhoPQ_related: PhoPQ- 98.1 2.3E-05 4.9E-10 81.6 10.7 138 9-147 184-324 (367)
44 COG3458 Acetyl esterase (deace 98.1 7.1E-06 1.5E-10 82.4 6.5 130 7-144 186-318 (321)
45 PRK06765 homoserine O-acetyltr 98.0 3.9E-05 8.5E-10 79.9 12.1 67 76-142 314-387 (389)
46 TIGR03056 bchO_mg_che_rel puta 98.0 3.9E-05 8.4E-10 71.9 10.9 62 79-141 214-278 (278)
47 PRK00175 metX homoserine O-ace 98.0 5.6E-05 1.2E-09 77.5 12.9 68 77-144 301-375 (379)
48 PLN02511 hydrolase 98.0 2.3E-05 5E-10 80.9 9.9 70 75-145 288-367 (388)
49 PLN03087 BODYGUARD 1 domain co 98.0 5.7E-05 1.2E-09 81.1 12.9 59 83-142 416-478 (481)
50 TIGR03695 menH_SHCHC 2-succiny 98.0 5.1E-05 1.1E-09 67.9 10.7 63 77-141 186-251 (251)
51 PRK11460 putative hydrolase; P 98.0 3.2E-05 6.9E-10 74.4 9.9 60 84-145 147-210 (232)
52 TIGR01249 pro_imino_pep_1 prol 98.0 0.0001 2.3E-09 72.6 13.5 64 79-144 241-306 (306)
53 PRK10115 protease 2; Provision 98.0 4.4E-05 9.5E-10 84.9 12.0 130 2-145 528-677 (686)
54 TIGR02821 fghA_ester_D S-formy 98.0 4.9E-05 1.1E-09 74.4 10.9 125 2-144 142-275 (275)
55 PRK10673 acyl-CoA esterase; Pr 98.0 5.3E-05 1.2E-09 70.8 10.7 61 81-142 191-254 (255)
56 COG1073 Hydrolases of the alph 97.9 2.6E-05 5.6E-10 73.1 7.6 72 73-144 219-298 (299)
57 PLN02894 hydrolase, alpha/beta 97.9 0.00015 3.2E-09 75.5 13.9 71 77-148 317-390 (402)
58 PRK10985 putative hydrolase; P 97.8 0.00019 4.1E-09 71.8 12.5 69 76-145 246-322 (324)
59 PF00561 Abhydrolase_1: alpha/ 97.8 7.7E-05 1.7E-09 67.4 8.8 60 77-137 167-229 (230)
60 KOG4667 Predicted esterase [Li 97.8 4E-05 8.8E-10 75.1 6.5 131 7-143 115-258 (269)
61 PRK11126 2-succinyl-6-hydroxy- 97.8 0.00028 6E-09 65.6 11.6 59 77-142 180-241 (242)
62 PF08840 BAAT_C: BAAT / Acyl-C 97.8 7.4E-06 1.6E-10 78.2 1.0 143 2-145 26-212 (213)
63 KOG2100 Dipeptidyl aminopeptid 97.7 8.7E-05 1.9E-09 83.6 8.6 130 2-148 612-752 (755)
64 PLN03084 alpha/beta hydrolase 97.7 0.00045 9.7E-09 72.0 12.4 57 83-141 323-382 (383)
65 KOG2551 Phospholipase/carboxyh 97.6 0.00026 5.6E-09 69.3 9.5 65 82-147 160-224 (230)
66 COG0400 Predicted esterase [Ge 97.6 0.00014 3.1E-09 70.1 7.6 60 83-144 144-206 (207)
67 TIGR03100 hydr1_PEP hydrolase, 97.6 0.00046 9.9E-09 67.6 11.2 65 78-142 200-274 (274)
68 PF05728 UPF0227: Uncharacteri 97.6 0.00035 7.5E-09 66.3 9.6 125 2-141 63-187 (187)
69 PRK03204 haloalkane dehalogena 97.6 0.0008 1.7E-08 66.0 11.9 55 85-140 227-285 (286)
70 PRK08775 homoserine O-acetyltr 97.6 0.00015 3.2E-09 72.9 6.8 63 81-143 273-339 (343)
71 TIGR01392 homoserO_Ac_trn homo 97.4 0.00034 7.4E-09 70.5 6.8 64 78-141 281-351 (351)
72 PLN02980 2-oxoglutarate decarb 97.4 0.0012 2.5E-08 80.3 12.4 67 77-144 1560-1640(1655)
73 PLN02965 Probable pheophorbida 97.4 0.00062 1.3E-08 64.9 8.0 61 81-142 189-252 (255)
74 PF03959 FSH1: Serine hydrolas 97.3 0.00032 6.9E-09 66.7 5.5 54 82-135 158-211 (212)
75 COG0429 Predicted hydrolase of 97.3 0.00097 2.1E-08 68.8 9.1 71 75-145 264-342 (345)
76 TIGR01849 PHB_depoly_PhaZ poly 97.3 0.0015 3.3E-08 69.0 10.8 62 81-142 333-405 (406)
77 PLN02211 methyl indole-3-aceta 97.3 0.0037 7.9E-08 61.3 12.7 59 83-142 208-269 (273)
78 TIGR01839 PHA_synth_II poly(R) 97.3 0.00078 1.7E-08 73.7 8.6 45 81-125 437-481 (560)
79 PRK10162 acetyl esterase; Prov 97.2 0.0016 3.5E-08 65.5 9.3 60 84-145 247-317 (318)
80 PF05705 DUF829: Eukaryotic pr 97.2 0.0025 5.3E-08 61.1 9.9 57 84-140 177-240 (240)
81 TIGR01838 PHA_synth_I poly(R)- 97.2 0.0022 4.9E-08 69.8 10.4 47 79-125 409-455 (532)
82 PF06500 DUF1100: Alpha/beta h 97.1 0.0027 5.9E-08 67.2 10.4 133 2-144 265-410 (411)
83 COG0412 Dienelactone hydrolase 97.1 0.0027 5.8E-08 62.0 9.5 65 81-145 154-235 (236)
84 PRK05855 short chain dehydroge 97.0 0.0011 2.4E-08 69.7 5.9 61 83-144 231-293 (582)
85 PF07859 Abhydrolase_3: alpha/ 96.9 0.0022 4.8E-08 59.0 6.3 103 19-126 98-209 (211)
86 PLN02872 triacylglycerol lipas 96.7 0.0045 9.7E-08 65.0 8.1 65 81-145 319-391 (395)
87 PRK07868 acyl-CoA synthetase; 96.7 0.0031 6.7E-08 72.8 7.5 65 81-145 293-363 (994)
88 PF08386 Abhydrolase_4: TAP-li 96.7 0.0054 1.2E-07 52.5 7.0 58 84-142 33-93 (103)
89 KOG3043 Predicted hydrolase re 96.7 0.0051 1.1E-07 60.7 7.3 67 78-144 157-241 (242)
90 TIGR01840 esterase_phb esteras 96.5 0.004 8.7E-08 58.4 5.1 30 84-113 167-196 (212)
91 KOG2382 Predicted alpha/beta h 96.4 0.023 5E-07 58.4 10.2 62 82-144 250-314 (315)
92 PF02129 Peptidase_S15: X-Pro 95.9 0.066 1.4E-06 52.3 10.4 53 72-125 215-271 (272)
93 COG4287 PqaA PhoPQ-activated p 95.8 0.014 3.1E-07 61.3 5.8 134 14-148 251-392 (507)
94 KOG1553 Predicted alpha/beta h 95.8 0.0058 1.3E-07 63.8 2.6 85 2-102 315-400 (517)
95 COG0596 MhpC Predicted hydrola 95.7 0.043 9.3E-07 48.0 7.6 63 79-141 215-280 (282)
96 TIGR00976 /NonD putative hydro 95.7 0.05 1.1E-06 58.9 9.4 69 76-146 223-306 (550)
97 COG0657 Aes Esterase/lipase [L 95.7 0.05 1.1E-06 53.9 8.7 56 85-142 245-309 (312)
98 KOG1838 Alpha/beta hydrolase [ 95.4 0.14 3E-06 54.5 11.3 72 73-145 310-390 (409)
99 PF02273 Acyl_transf_2: Acyl t 95.4 0.25 5.4E-06 49.9 12.4 115 9-128 113-240 (294)
100 KOG4409 Predicted hydrolase/ac 95.2 0.15 3.2E-06 53.4 10.6 67 76-143 292-364 (365)
101 KOG2281 Dipeptidyl aminopeptid 95.1 0.048 1E-06 60.8 6.8 119 7-142 737-866 (867)
102 COG1505 Serine proteases of th 94.8 0.027 5.8E-07 62.2 3.9 116 16-145 519-648 (648)
103 COG2945 Predicted hydrolase of 94.7 0.13 2.9E-06 49.9 8.0 60 80-141 144-205 (210)
104 KOG1515 Arylacetamide deacetyl 94.7 0.15 3.1E-06 53.0 8.8 138 4-143 176-335 (336)
105 PF06821 Ser_hydrolase: Serine 94.4 0.23 4.9E-06 46.4 8.7 41 84-126 113-154 (171)
106 COG3243 PhaC Poly(3-hydroxyalk 94.0 0.11 2.4E-06 55.5 6.4 68 81-148 326-404 (445)
107 PRK04940 hypothetical protein; 93.8 0.5 1.1E-05 45.2 9.8 51 88-141 127-178 (180)
108 PF03583 LIP: Secretory lipase 93.8 0.18 3.8E-06 50.8 7.1 62 85-147 219-285 (290)
109 PLN00021 chlorophyllase 93.5 0.16 3.4E-06 51.8 6.2 63 84-146 188-286 (313)
110 PF08538 DUF1749: Protein of u 93.4 0.041 8.8E-07 56.4 1.9 70 72-141 219-303 (303)
111 COG3208 GrsT Predicted thioest 93.3 0.2 4.3E-06 50.0 6.4 59 83-141 174-234 (244)
112 KOG4178 Soluble epoxide hydrol 93.0 0.26 5.6E-06 51.0 6.9 62 82-143 255-320 (322)
113 COG3545 Predicted esterase of 92.7 0.38 8.1E-06 46.1 7.1 57 84-142 116-178 (181)
114 KOG3253 Predicted alpha/beta h 92.5 0.45 9.7E-06 53.1 8.2 71 79-149 298-384 (784)
115 KOG2112 Lysophospholipase [Lip 90.3 0.41 8.8E-06 46.8 4.7 56 85-142 144-203 (206)
116 PF07519 Tannase: Tannase and 90.3 0.45 9.8E-06 51.3 5.5 66 78-143 346-427 (474)
117 PF06342 DUF1057: Alpha/beta h 88.6 3 6.4E-05 42.9 9.5 112 7-119 114-246 (297)
118 COG1770 PtrB Protease II [Amin 88.5 1.7 3.8E-05 48.9 8.4 109 2-126 531-657 (682)
119 COG2021 MET2 Homoserine acetyl 88.5 1.5 3.3E-05 46.2 7.6 67 76-142 297-367 (368)
120 PF05677 DUF818: Chlamydia CHL 87.7 4.1 9E-05 42.9 10.1 103 21-144 244-364 (365)
121 PF00756 Esterase: Putative es 87.4 0.81 1.8E-05 43.3 4.5 113 2-140 119-251 (251)
122 COG3571 Predicted hydrolase of 87.0 2 4.4E-05 41.2 6.8 63 78-142 135-210 (213)
123 PRK10439 enterobactin/ferric e 86.2 2.6 5.7E-05 44.7 8.0 42 86-128 350-394 (411)
124 PF09752 DUF2048: Uncharacteri 84.6 1.4 3.1E-05 46.1 5.0 55 85-140 289-346 (348)
125 PF03096 Ndr: Ndr family; Int 79.7 25 0.00055 36.1 11.7 57 83-141 217-277 (283)
126 KOG1551 Uncharacterized conser 77.8 4.1 8.9E-05 41.9 5.3 63 80-143 296-366 (371)
127 COG4099 Predicted peptidase [G 77.6 2.3 4.9E-05 44.3 3.5 30 84-113 314-343 (387)
128 PF03403 PAF-AH_p_II: Platelet 76.4 16 0.00034 38.5 9.5 65 82-148 271-363 (379)
129 PF06028 DUF915: Alpha/beta hy 75.4 3.8 8.2E-05 41.0 4.3 57 84-140 183-252 (255)
130 PF12715 Abhydrolase_7: Abhydr 74.7 1.6 3.4E-05 46.4 1.6 106 3-122 231-343 (390)
131 PF06850 PHB_depo_C: PHB de-po 71.7 5.5 0.00012 38.9 4.3 58 85-142 134-201 (202)
132 PF00975 Thioesterase: Thioest 71.5 30 0.00065 32.0 9.1 56 85-140 168-229 (229)
133 COG0627 Predicted esterase [Ge 70.7 5.7 0.00012 41.0 4.5 136 3-146 157-314 (316)
134 PF10605 3HBOH: 3HB-oligomer h 68.6 6.1 0.00013 44.5 4.3 45 82-126 551-604 (690)
135 COG4757 Predicted alpha/beta h 67.5 19 0.00041 36.6 7.1 64 77-140 208-280 (281)
136 PF06057 VirJ: Bacterial virul 65.9 11 0.00024 36.6 5.1 60 76-142 129-191 (192)
137 KOG2624 Triglyceride lipase-ch 64.4 15 0.00033 39.2 6.3 64 81-144 328-399 (403)
138 PF10503 Esterase_phd: Esteras 64.3 6.4 0.00014 38.6 3.2 28 85-112 169-196 (220)
139 COG2382 Fes Enterochelin ester 61.2 17 0.00036 37.6 5.6 107 2-137 181-293 (299)
140 KOG4627 Kynurenine formamidase 58.4 6.9 0.00015 39.1 2.2 48 78-126 200-248 (270)
141 TIGR03101 hydr2_PEP hydrolase, 57.8 15 0.00032 36.9 4.5 42 2-43 103-146 (266)
142 PF12048 DUF3530: Protein of u 53.8 98 0.0021 31.7 9.8 102 5-143 201-309 (310)
143 COG2868 Predicted ribosomal pr 52.0 23 0.0005 31.6 4.3 42 259-303 60-101 (109)
144 KOG2237 Predicted serine prote 50.3 20 0.00042 40.8 4.3 134 4-145 555-707 (712)
145 COG3150 Predicted esterase [Ge 49.5 22 0.00047 34.4 4.0 48 90-141 139-187 (191)
146 PF11339 DUF3141: Protein of u 49.2 13 0.00029 41.2 2.8 24 81-104 293-316 (581)
147 KOG3847 Phospholipase A2 (plat 45.0 1.4E+02 0.003 31.8 9.2 74 82-157 284-385 (399)
148 PF10230 DUF2305: Uncharacteri 43.8 1.1E+02 0.0024 30.4 8.2 42 85-126 221-265 (266)
149 PRK10252 entF enterobactin syn 38.2 2.2E+02 0.0047 33.9 10.7 62 82-144 1233-1294(1296)
150 COG2936 Predicted acyl esteras 36.0 1.4E+02 0.003 33.7 8.0 48 76-125 243-291 (563)
151 KOG2931 Differentiation-relate 35.4 4.4E+02 0.0096 27.8 11.0 57 83-141 244-304 (326)
152 PF10340 DUF2424: Protein of u 33.3 1.3E+02 0.0028 32.2 7.0 54 85-141 302-364 (374)
153 PF13887 MRF_C1: Myelin gene r 32.5 28 0.00061 25.3 1.4 12 280-291 4-15 (36)
154 PLN02213 sinapoylglucose-malat 30.0 1.4E+02 0.0031 30.3 6.6 58 85-142 233-316 (319)
155 PRK08775 homoserine O-acetyltr 26.3 37 0.0008 34.2 1.6 30 2-31 142-173 (343)
156 PLN02965 Probable pheophorbida 25.4 43 0.00094 31.8 1.8 29 2-30 76-106 (255)
157 PRK14285 chaperone protein Dna 24.2 70 0.0015 33.5 3.2 34 260-297 325-358 (365)
158 PTZ00472 serine carboxypeptida 23.9 2E+02 0.0044 31.1 6.7 29 84-112 363-391 (462)
159 PRK14553 hypothetical protein; 23.9 1.1E+02 0.0024 26.6 4.0 42 259-303 59-100 (108)
160 KOG2521 Uncharacterized conser 23.9 1.9E+02 0.0041 30.7 6.3 65 84-148 224-295 (350)
161 PF00450 Peptidase_S10: Serine 23.4 1.4E+02 0.0031 30.4 5.2 58 84-141 329-414 (415)
162 PF01674 Lipase_2: Lipase (cla 22.4 1.5E+02 0.0032 29.2 4.9 61 85-145 1-71 (219)
163 PF15603 Imm45: Immunity prote 22.1 1.4E+02 0.0031 25.3 4.1 61 237-298 7-77 (82)
No 1
>PRK13604 luxD acyl transferase; Provisional
Probab=99.44 E-value=9.2e-13 Score=133.00 Aligned_cols=126 Identities=11% Similarity=0.109 Sum_probs=91.7
Q ss_pred cccccHHHHHHHHhccCCCccEEEEeCCcCCHHHHHHHHHHHhhccCChhhH---------HH-HHHHHHHHHhhhhccc
Q 013073 2 LLTINIVYHSLLYGAEDPSIAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTV---------KF-AIQYMRKAIQKKAKFD 71 (450)
Q Consensus 2 ll~~sgGATALm~AAe~p~IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~---------~~-~l~flr~~Ikkr~gFd 71 (450)
|+|-|+|++..+.++...+++++|+++||++++++++..+......+|.... .+ ...|++ ....++
T Consensus 112 LiG~SmGgava~~~A~~~~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~----~~~~~~ 187 (307)
T PRK13604 112 LIAASLSARIAYEVINEIDLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVT----DCFKHG 187 (307)
T ss_pred EEEECHHHHHHHHHhcCCCCCEEEEcCCcccHHHHHHHhhhcccccCcccccccccccccccccHHHHHH----HHHhcC
Confidence 7899998888776666667999999999999998888654431011222111 00 112332 222333
Q ss_pred cc-cccHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhC-CCcEEEEeCCC-CCCCChHH
Q 013073 72 IT-DLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYA-GDKNIIKFEGD-HNSPRPQF 131 (450)
Q Consensus 72 L~-dlsPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalk-gpKeLvi~EGg-Hn~~~pee 131 (450)
+. ..++++.++++++|+|||||++|++||++++++||++++ ++|++++++|+ |.+...--
T Consensus 188 ~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~~~~ 250 (307)
T PRK13604 188 WDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGENLV 250 (307)
T ss_pred ccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCcchH
Confidence 34 357889999999999999999999999999999999997 58999999997 98865433
No 2
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.33 E-value=9e-13 Score=129.70 Aligned_cols=120 Identities=21% Similarity=0.295 Sum_probs=91.0
Q ss_pred cccccHHHHH-HHHhccCCCccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHHHH
Q 013073 2 LLTINIVYHS-LLYGAEDPSIAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIKV 80 (450)
Q Consensus 2 ll~~sgGATA-Lm~AAe~p~IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik~ 80 (450)
|+|=|+|+.. +..|++.| ++||||.+||.+..+++....+.. .+ | .....++.
T Consensus 134 l~G~SiGt~~tv~Lasr~~-~~alVL~SPf~S~~rv~~~~~~~~-~~----------------------~--d~f~~i~k 187 (258)
T KOG1552|consen 134 LYGQSIGTVPTVDLASRYP-LAAVVLHSPFTSGMRVAFPDTKTT-YC----------------------F--DAFPNIEK 187 (258)
T ss_pred EEEecCCchhhhhHhhcCC-cceEEEeccchhhhhhhccCcceE-Ee----------------------e--ccccccCc
Confidence 6677777665 67778888 999999999999877765432110 00 1 01112566
Q ss_pred hhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcE-EEEeCCCCCCC-ChHHHHHHHHHHHHHhcCCC
Q 013073 81 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKN-IIKFEGDHNSP-RPQFYFDSINIFFHNVLQPP 147 (450)
Q Consensus 81 akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKe-Lvi~EGgHn~~-~peeyle~Iv~FLk~~L~~~ 147 (450)
++.++||+|||||++|++||+.|+++||++++.+.+ +|+..+||++. ...+|++.+..|+....+..
T Consensus 188 I~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~~~~~ 256 (258)
T KOG1552|consen 188 ISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEYIEHLRRFISSVLPSQ 256 (258)
T ss_pred ceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCHHHHHHHHHHHHHhcccC
Confidence 788999999999999999999999999999998655 55555568874 57899999999999876543
No 3
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.13 E-value=1.8e-10 Score=106.90 Aligned_cols=129 Identities=21% Similarity=0.250 Sum_probs=87.5
Q ss_pred cccccHHHHHHHHh-ccCCC-ccEEEEeCCcCCHHHHHHHH--HHH--h-hccCChhhHHHHHHHHHHHHhhhhcccccc
Q 013073 2 LLTINIVYHSLLYG-AEDPS-IAGMVLDSPFSDLVDLMMEL--VDT--Y-KIRLPKFTVKFAIQYMRKAIQKKAKFDITD 74 (450)
Q Consensus 2 ll~~sgGATALm~A-Ae~p~-IKgLILDSPFSdL~dl~~e~--lk~--~-~~~LP~~~~~~~l~flr~~Ikkr~gFdL~d 74 (450)
|+|.|.|+...+++ .++|+ ++++|+.+|+.++....... +.. + ....|... ...+..
T Consensus 68 i~G~S~GG~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~ 131 (213)
T PF00326_consen 68 IMGHSYGGYLALLAATQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDN----------------PEFYRE 131 (213)
T ss_dssp EEEETHHHHHHHHHHHHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTS----------------HHHHHH
T ss_pred EEcccccccccchhhcccceeeeeeeccceecchhcccccccccccccccccCccchh----------------hhhhhh
Confidence 56776655544444 44665 89999999999876544321 110 0 01111100 001222
Q ss_pred ccHHHHhhc--cCCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCC-CCCCCC---hHHHHHHHHHHHHHhcC
Q 013073 75 LNTIKVAKS--CFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEG-DHNSPR---PQFYFDSINIFFHNVLQ 145 (450)
Q Consensus 75 lsPik~akk--IkvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EG-gHn~~~---peeyle~Iv~FLk~~L~ 145 (450)
++++..+.+ +++|+||+||++|.+||+.++.+|++++.. +.+++++++ +|.... ..++.+++.+||+++|+
T Consensus 132 ~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 132 LSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp HHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred hccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 356666667 899999999999999999999999998864 578999988 597644 45889999999999986
Q ss_pred C
Q 013073 146 P 146 (450)
Q Consensus 146 ~ 146 (450)
.
T Consensus 212 ~ 212 (213)
T PF00326_consen 212 K 212 (213)
T ss_dssp -
T ss_pred C
Confidence 4
No 4
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.07 E-value=8.8e-11 Score=114.14 Aligned_cols=127 Identities=20% Similarity=0.406 Sum_probs=93.7
Q ss_pred ccccc-HHHHHHHHhccCC-CccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHHH
Q 013073 2 LLTIN-IVYHSLLYGAEDP-SIAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIK 79 (450)
Q Consensus 2 ll~~s-gGATALm~AAe~p-~IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik 79 (450)
|+|=| |||+|+..|+++. +|.|+|++..|.++...+...+ +.++ .+.+-.+.. + ..+ ....
T Consensus 153 lfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v----~p~~---~k~i~~lc~----k-n~~-----~S~~ 215 (300)
T KOG4391|consen 153 LFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLV----FPFP---MKYIPLLCY----K-NKW-----LSYR 215 (300)
T ss_pred EEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhee----ccch---hhHHHHHHH----H-hhh-----cchh
Confidence 44555 4556666677765 6999999999999976655442 1111 111111111 0 111 3355
Q ss_pred HhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEeCCC-CCCCC-hHHHHHHHHHHHHHhcC
Q 013073 80 VAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEGD-HNSPR-PQFYFDSINIFFHNVLQ 145 (450)
Q Consensus 80 ~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~EGg-Hn~~~-peeyle~Iv~FLk~~L~ 145 (450)
.++.++.|.|||.|.+|++|||-+.++||+.+++ .|++..|++| ||+++ .+-|++.|..||.+...
T Consensus 216 ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 216 KIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICDGYFQAIEDFLAEVVK 284 (300)
T ss_pred hhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEeccHHHHHHHHHHHhcc
Confidence 6678999999999999999999999999999998 6899999987 99987 68999999999998865
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.94 E-value=2.1e-09 Score=106.24 Aligned_cols=70 Identities=21% Similarity=0.316 Sum_probs=58.4
Q ss_pred HHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEeCCC-CCCC--Ch----HHHHHHHHHHHHHhcCCCC
Q 013073 79 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEGD-HNSP--RP----QFYFDSINIFFHNVLQPPE 148 (450)
Q Consensus 79 k~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~EGg-Hn~~--~p----eeyle~Iv~FLk~~L~~~~ 148 (450)
..+.++++|+|||||++|.+||++++++|++.++. .+++++++|+ |... .+ +.+++.|.+||.++++...
T Consensus 245 ~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~ 322 (330)
T PLN02298 245 KKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKA 322 (330)
T ss_pred HhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCC
Confidence 44667999999999999999999999999999875 5899999985 8642 22 5688899999999986544
No 6
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.89 E-value=5.7e-09 Score=113.84 Aligned_cols=134 Identities=18% Similarity=0.157 Sum_probs=93.5
Q ss_pred ccccc-HHHHHHHHhccCCCccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhh-hccccccccHHH
Q 013073 2 LLTIN-IVYHSLLYGAEDPSIAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKK-AKFDITDLNTIK 79 (450)
Q Consensus 2 ll~~s-gGATALm~AAe~p~IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr-~gFdL~dlsPik 79 (450)
+.|+| ||-++++.+.+.+.+++.|+..+..++.......-..+ ...+. . .. .... .+..+...+|+.
T Consensus 477 i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~~~-~~~~~---~----~~---~~~~~~~~~~~~~sp~~ 545 (620)
T COG1506 477 ITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTEGL-RFDPE---E----NG---GGPPEDREKYEDRSPIF 545 (620)
T ss_pred EeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccchhh-cCCHH---H----hC---CCcccChHHHHhcChhh
Confidence 35666 45566776677788999998888776654433221110 00000 0 00 0000 112245569999
Q ss_pred HhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCC-CCCCCC---hHHHHHHHHHHHHHhcCC
Q 013073 80 VAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEG-DHNSPR---PQFYFDSINIFFHNVLQP 146 (450)
Q Consensus 80 ~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EG-gHn~~~---peeyle~Iv~FLk~~L~~ 146 (450)
++.++++|+|||||++|..||++|+++|+++++. +.++++|++ +|.... ...+++.+.+||+++++.
T Consensus 546 ~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 546 YADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred hhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999874 578999988 598755 457889999999998863
No 7
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.85 E-value=3.4e-09 Score=106.84 Aligned_cols=68 Identities=22% Similarity=0.373 Sum_probs=59.3
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEeCCC-CCC------CChHHHHHHHHHHHHHh
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEGD-HNS------PRPQFYFDSINIFFHNV 143 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~EGg-Hn~------~~peeyle~Iv~FLk~~ 143 (450)
+..+.+.++.+|.||+||++|.++.+..+++||+.+.. +|.+.+|+|. |.. ...+.++..|++||.++
T Consensus 237 ~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 237 DLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 45667788999999999999999999999999999987 8999999997 743 22568999999999875
No 8
>PHA02857 monoglyceride lipase; Provisional
Probab=98.85 E-value=1.8e-08 Score=96.16 Aligned_cols=66 Identities=14% Similarity=0.244 Sum_probs=55.8
Q ss_pred HHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCCC-----ChHHHHHHHHHHHHHhc
Q 013073 79 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSP-----RPQFYFDSINIFFHNVL 144 (450)
Q Consensus 79 k~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~~-----~peeyle~Iv~FLk~~L 144 (450)
+.+.++++|+|+|||++|.++|++.+++|++.++..+++.++++ +|... .++++++.|.+||.++.
T Consensus 203 ~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 203 KIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred HhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999999876778999987 58542 15689999999998763
No 9
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.84 E-value=3.9e-08 Score=102.61 Aligned_cols=62 Identities=19% Similarity=0.215 Sum_probs=55.1
Q ss_pred hccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCCChHHHHHHHHHHHHHhc
Q 013073 82 KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSPRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 82 kkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn~~~peeyle~Iv~FLk~~L 144 (450)
.++++|+|+|||++|.+||+++++.|.+.++ +.+++++++.|....+..+++.|.+||++.|
T Consensus 352 ~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~-~~~l~~i~~~~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 352 RRCPTPMLSGYWKNDPFSPEEDSRLIASSSA-DGKLLEIPFKPVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred cCCCCcEEEEecCCCCCCCHHHHHHHHHhCC-CCeEEEccCCCccCCHHHHHHHHHHHHHHHh
Confidence 5699999999999999999999998887775 4578999998777789999999999999875
No 10
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.80 E-value=3.6e-08 Score=102.43 Aligned_cols=67 Identities=24% Similarity=0.339 Sum_probs=58.7
Q ss_pred HHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEeCCC-CCC---CChHHHHHHHHHHHHHhcC
Q 013073 79 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEGD-HNS---PRPQFYFDSINIFFHNVLQ 145 (450)
Q Consensus 79 k~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~EGg-Hn~---~~peeyle~Iv~FLk~~L~ 145 (450)
..+.++++|+|||||++|.+||+++++++|+.+.. .+++++|+|+ |.. ..++++++.|.+||.++++
T Consensus 318 ~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 318 RNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred hhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 34567899999999999999999999999999776 6899999996 853 4588999999999999875
No 11
>PRK10566 esterase; Provisional
Probab=98.79 E-value=6.2e-08 Score=91.16 Aligned_cols=67 Identities=21% Similarity=0.215 Sum_probs=54.5
Q ss_pred cHHHHhhcc-CCCEEEEEeCCCCCCCHHHHHHHHHHhCCC-----cEEEEeCC-CCCCCChHHHHHHHHHHHHHhc
Q 013073 76 NTIKVAKSC-FVPVLFGHAVEDDFINPHHSDRIFEAYAGD-----KNIIKFEG-DHNSPRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 76 sPik~akkI-kvPVLIIHGe~D~iVPpe~Se~LyEalkgp-----KeLvi~EG-gHn~~~peeyle~Iv~FLk~~L 144 (450)
++...+.++ ++|+|+|||++|.+||+.++++|+++++.. .++++++| +|... .+.++.+.+||+++|
T Consensus 176 ~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~--~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 176 EVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT--PEALDAGVAFFRQHL 249 (249)
T ss_pred ChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC--HHHHHHHHHHHHhhC
Confidence 455566676 799999999999999999999999988642 36777888 59753 467899999999764
No 12
>PRK11071 esterase YqiA; Provisional
Probab=98.76 E-value=2.1e-08 Score=93.69 Aligned_cols=121 Identities=12% Similarity=0.104 Sum_probs=76.2
Q ss_pred cccccHHH-HHHHHhccCCCccEEEEeCCcCCHHHHHHHHHHHhhc-cCC-hhhHHHHHHHHHHHHhhhhccccccccHH
Q 013073 2 LLTINIVY-HSLLYGAEDPSIAGMVLDSPFSDLVDLMMELVDTYKI-RLP-KFTVKFAIQYMRKAIQKKAKFDITDLNTI 78 (450)
Q Consensus 2 ll~~sgGA-TALm~AAe~p~IKgLILDSPFSdL~dl~~e~lk~~~~-~LP-~~~~~~~l~flr~~Ikkr~gFdL~dlsPi 78 (450)
|.|-|+|+ +|+.+|.+.+ ++ +|+.+|..+..+.+...+..... ..+ .+.+. ..++. ++..+++.
T Consensus 65 lvG~S~Gg~~a~~~a~~~~-~~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---------d~~~~~~~ 131 (190)
T PRK11071 65 LVGSSLGGYYATWLSQCFM-LP-AVVVNPAVRPFELLTDYLGENENPYTGQQYVLE--SRHIY---------DLKVMQID 131 (190)
T ss_pred EEEECHHHHHHHHHHHHcC-CC-EEEECCCCCHHHHHHHhcCCcccccCCCcEEEc--HHHHH---------HHHhcCCc
Confidence 45666555 5555666666 33 57788877755555544322100 000 11110 11111 12222322
Q ss_pred HHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCC-CCCCChHHHHHHHHHHHH
Q 013073 79 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGD-HNSPRPQFYFDSINIFFH 141 (450)
Q Consensus 79 k~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGg-Hn~~~peeyle~Iv~FLk 141 (450)
. +. ..+|+|+|||++|++||++++.++|+.+ ++++++|| |++...+++++.|..||.
T Consensus 132 ~-i~-~~~~v~iihg~~De~V~~~~a~~~~~~~----~~~~~~ggdH~f~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 132 P-LE-SPDLIWLLQQTGDEVLDYRQAVAYYAAC----RQTVEEGGNHAFVGFERYFNQIVDFLG 189 (190)
T ss_pred c-CC-ChhhEEEEEeCCCCcCCHHHHHHHHHhc----ceEEECCCCcchhhHHHhHHHHHHHhc
Confidence 2 44 7889999999999999999999999964 46677875 999888999999999985
No 13
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.73 E-value=3.5e-08 Score=98.96 Aligned_cols=67 Identities=21% Similarity=0.319 Sum_probs=55.9
Q ss_pred HHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEeCC-CCCCC--ChH----HHHHHHHHHHHHhcC
Q 013073 79 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEG-DHNSP--RPQ----FYFDSINIFFHNVLQ 145 (450)
Q Consensus 79 k~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~EG-gHn~~--~pe----eyle~Iv~FLk~~L~ 145 (450)
..+.++++|+|||||++|.+||+..++.+++.+.. ++++++++| +|... .++ .+++.|.+||.+++.
T Consensus 273 ~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 273 MQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 34567999999999999999999999999999875 578999988 48652 344 488899999998764
No 14
>COG1647 Esterase/lipase [General function prediction only]
Probab=98.66 E-value=1.5e-07 Score=91.81 Aligned_cols=136 Identities=12% Similarity=0.130 Sum_probs=84.9
Q ss_pred cccH-HHHHHHHhccCCCccEEEEeCCcCCH---HHHHHHHH---HHhhccCChhhHHHHHHHHHHHH----hhhhcccc
Q 013073 4 TINI-VYHSLLYGAEDPSIAGMVLDSPFSDL---VDLMMELV---DTYKIRLPKFTVKFAIQYMRKAI----QKKAKFDI 72 (450)
Q Consensus 4 ~~sg-GATALm~AAe~p~IKgLILDSPFSdL---~dl~~e~l---k~~~~~LP~~~~~~~l~flr~~I----kkr~gFdL 72 (450)
|.|| |+.||..|...| ++++|..|+.... +.++...+ +.+ ..+++.-..-+...++..- .....|.-
T Consensus 91 GlSmGGv~alkla~~~p-~K~iv~m~a~~~~k~~~~iie~~l~y~~~~-kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~ 168 (243)
T COG1647 91 GLSMGGVFALKLAYHYP-PKKIVPMCAPVNVKSWRIIIEGLLEYFRNA-KKYEGKDQEQIDKEMKSYKDTPMTTTAQLKK 168 (243)
T ss_pred eecchhHHHHHHHhhCC-ccceeeecCCcccccchhhhHHHHHHHHHh-hhccCCCHHHHHHHHHHhhcchHHHHHHHHH
Confidence 4554 456676666667 9999999986652 22222221 111 1112111111122221110 00000100
Q ss_pred ccccHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEeCC-CCCC---CChHHHHHHHHHHHH
Q 013073 73 TDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEG-DHNS---PRPQFYFDSINIFFH 141 (450)
Q Consensus 73 ~dlsPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~EG-gHn~---~~peeyle~Iv~FLk 141 (450)
.--+..+.+..|..|+|+++|.+|++||.+.+..||+.... +|+|.+|++ ||.- ..++.+.+.|..||+
T Consensus 169 ~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 169 LIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred HHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhh
Confidence 00034556778999999999999999999999999999876 799999998 5854 458899999999996
No 15
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.65 E-value=4.2e-07 Score=102.03 Aligned_cols=145 Identities=16% Similarity=0.142 Sum_probs=94.3
Q ss_pred cccccHHHHHHH-Hhcc-CCCccEEEEeCCcCCHHHHHHHHH-HHhhccCChh----hHH-----------------HHH
Q 013073 2 LLTINIVYHSLL-YGAE-DPSIAGMVLDSPFSDLVDLMMELV-DTYKIRLPKF----TVK-----------------FAI 57 (450)
Q Consensus 2 ll~~sgGATALm-~AAe-~p~IKgLILDSPFSdL~dl~~e~l-k~~~~~LP~~----~~~-----------------~~l 57 (450)
+.|.|.+++.-+ +|+. .+.++++|.+++++++++.++..- -.+..++++. ... ...
T Consensus 342 m~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~ 421 (767)
T PRK05371 342 MTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACE 421 (767)
T ss_pred EEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHH
Confidence 467777665444 4454 467999999999999887654310 0000000000 000 000
Q ss_pred HHHH---HHHhhhhc-c--ccccccHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCCCCCCC-
Q 013073 58 QYMR---KAIQKKAK-F--DITDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGDHNSP- 127 (450)
Q Consensus 58 ~flr---~~Ikkr~g-F--dL~dlsPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EGgHn~~- 127 (450)
.++. ..+....+ + -+...+++..+.++++|+|+|||..|..|++.++.++|++++. +++|++.+|+|...
T Consensus 422 ~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g~H~~~~ 501 (767)
T PRK05371 422 KLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQGGHVYPN 501 (767)
T ss_pred HHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCCCccCCC
Confidence 0000 00000001 1 1355678889999999999999999999999999999999853 78899889999653
Q ss_pred --ChHHHHHHHHHHHHHhcCC
Q 013073 128 --RPQFYFDSINIFFHNVLQP 146 (450)
Q Consensus 128 --~peeyle~Iv~FLk~~L~~ 146 (450)
.+.++.+.+..||.++|..
T Consensus 502 ~~~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 502 NWQSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred chhHHHHHHHHHHHHHhcccc
Confidence 2568899999999999853
No 16
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.65 E-value=2.4e-07 Score=83.26 Aligned_cols=64 Identities=11% Similarity=0.093 Sum_probs=53.5
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHH
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFF 140 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FL 140 (450)
+....+.++++|+|+|+|++|.+||++..+.+.+.++ ..+++++++ ||.. ..++++.+.|.+|+
T Consensus 179 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 179 DLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP-HSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred cHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC-CCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 3445677899999999999999999999999988877 457888876 6975 55889999999985
No 17
>PRK10749 lysophospholipase L2; Provisional
Probab=98.63 E-value=3.9e-07 Score=91.07 Aligned_cols=65 Identities=22% Similarity=0.294 Sum_probs=53.6
Q ss_pred HHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC------CcEEEEeCCC-CCC---CC--hHHHHHHHHHHHHHh
Q 013073 79 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG------DKNIIKFEGD-HNS---PR--PQFYFDSINIFFHNV 143 (450)
Q Consensus 79 k~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg------pKeLvi~EGg-Hn~---~~--peeyle~Iv~FLk~~ 143 (450)
..+.++++|+|||||++|++|++..++.+++.++. .+++++|+|+ |.. .. ++.+++.|..||.++
T Consensus 253 ~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 253 AGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred hhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 45677999999999999999999999999998742 3589999984 853 22 578999999999764
No 18
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.60 E-value=2.3e-07 Score=94.21 Aligned_cols=134 Identities=19% Similarity=0.227 Sum_probs=82.0
Q ss_pred cccc-HHHHHHHHhccCCCccEEEEeCCcC-CHHHHHHHHHHHhhccCChhhHHHHHHHHH---HH--Hhhhhccccccc
Q 013073 3 LTIN-IVYHSLLYGAEDPSIAGMVLDSPFS-DLVDLMMELVDTYKIRLPKFTVKFAIQYMR---KA--IQKKAKFDITDL 75 (450)
Q Consensus 3 l~~s-gGATALm~AAe~p~IKgLILDSPFS-dL~dl~~e~lk~~~~~LP~~~~~~~l~flr---~~--Ikkr~gFdL~dl 75 (450)
.|+| ||+.++++|+.+++|+++++..||. ++...+..... ..|. ..+..|++ .. .....--.+.-+
T Consensus 180 ~G~SqGG~lal~~aaLd~rv~~~~~~vP~l~d~~~~~~~~~~----~~~y---~~~~~~~~~~d~~~~~~~~v~~~L~Y~ 252 (320)
T PF05448_consen 180 TGGSQGGGLALAAAALDPRVKAAAADVPFLCDFRRALELRAD----EGPY---PEIRRYFRWRDPHHEREPEVFETLSYF 252 (320)
T ss_dssp EEETHHHHHHHHHHHHSST-SEEEEESESSSSHHHHHHHT------STTT---HHHHHHHHHHSCTHCHHHHHHHHHHTT
T ss_pred EeecCchHHHHHHHHhCccccEEEecCCCccchhhhhhcCCc----cccH---HHHHHHHhccCCCcccHHHHHHHHhhh
Confidence 3555 5677888889999999999999865 44444332210 1121 11112222 00 000011123445
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCCChHHHHHHHHHHHHHh
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSPRPQFYFDSINIFFHNV 143 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn~~~peeyle~Iv~FLk~~ 143 (450)
|..+.+++|+||+|+.-|-.|+++||.....+|++++++|++++|+.+|.+..+....++...||.++
T Consensus 253 D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 253 DAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPEFQEDKQLNFLKEH 320 (320)
T ss_dssp -HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHHHHHHHHHHHHHH-
T ss_pred hHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhhHHHHHHHHHHhcC
Confidence 88899999999999999999999999999999999999999999987533344555578888899864
No 19
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.56 E-value=2.8e-07 Score=88.53 Aligned_cols=66 Identities=14% Similarity=0.033 Sum_probs=57.0
Q ss_pred HHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCCC--CChHHHHHHHHHHHHHhc
Q 013073 78 IKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNS--PRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 78 ik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn~--~~peeyle~Iv~FLk~~L 144 (450)
...++++++|+|||+|++|+++|+++++++.+.+++ .+++++++||.. ..++++.+.|.+||.+.-
T Consensus 200 ~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~-~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 200 IHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPN-AELHIIDDGHLFLITRAEAVAPIIMKFLAEER 267 (276)
T ss_pred hhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCC-CEEEEEcCCCchhhccHHHHHHHHHHHHHHhh
Confidence 455788999999999999999999999999998875 578888989975 458899999999998753
No 20
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.56 E-value=2.9e-07 Score=82.81 Aligned_cols=65 Identities=17% Similarity=0.243 Sum_probs=53.5
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHH
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFH 141 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk 141 (450)
+....+.++++|+|+|||++|.++|++..+.+++.++. .+++++++ +|.. ..++.+.+.|.+||.
T Consensus 184 ~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 184 DFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPG-ARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred cHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCC-ceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 44566778999999999999999999999999888764 57888875 6964 458899999999873
No 21
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.54 E-value=5.6e-07 Score=82.21 Aligned_cols=64 Identities=17% Similarity=0.165 Sum_probs=53.6
Q ss_pred HHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHH
Q 013073 77 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFH 141 (450)
Q Consensus 77 Pik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk 141 (450)
....+.++++|+||+||++|.++|++.++++++.+++. +++++++ ||.. ..++++.+.|.+||+
T Consensus 190 ~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 190 VSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNA-QLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred cHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCc-eEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 34567789999999999999999999999999988754 5777765 6864 568899999999986
No 22
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=98.52 E-value=3.6e-07 Score=78.12 Aligned_cols=79 Identities=28% Similarity=0.427 Sum_probs=61.6
Q ss_pred cccccHHHHHHHHh-ccCCCccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHHHH
Q 013073 2 LLTINIVYHSLLYG-AEDPSIAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIKV 80 (450)
Q Consensus 2 ll~~sgGATALm~A-Ae~p~IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik~ 80 (450)
|.|.|+|+...+.+ .+++.|+++|+.+||.+ ...
T Consensus 65 l~G~S~Gg~~a~~~~~~~~~v~~~v~~~~~~~---------------------------------------------~~~ 99 (145)
T PF12695_consen 65 LIGHSMGGAIAANLAARNPRVKAVVLLSPYPD---------------------------------------------SED 99 (145)
T ss_dssp EEEETHHHHHHHHHHHHSTTESEEEEESESSG---------------------------------------------CHH
T ss_pred EEEEccCcHHHHHHhhhccceeEEEEecCccc---------------------------------------------hhh
Confidence 56777777666554 45688999999999511 011
Q ss_pred hhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCC-CC
Q 013073 81 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGD-HN 125 (450)
Q Consensus 81 akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGg-Hn 125 (450)
+.+.++|+||+||++|.++|+++.+++|+.++.++++++++|+ |+
T Consensus 100 ~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 100 LAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred hhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 2245569999999999999999999999999988999999996 85
No 23
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.51 E-value=2e-06 Score=81.78 Aligned_cols=65 Identities=11% Similarity=0.138 Sum_probs=55.6
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHH
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFH 141 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk 141 (450)
+....+.++++|+|+|+|++|.+||+..++++++.+++ .+++++++ ||.. ..++.+.+.|.+||.
T Consensus 214 ~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~-~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 214 DVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPD-AQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred hHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCC-CEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 44556788999999999999999999999999998874 67888876 6976 458899999999986
No 24
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.47 E-value=8.6e-07 Score=88.94 Aligned_cols=65 Identities=23% Similarity=0.356 Sum_probs=56.5
Q ss_pred hhccCCCEEEEEeCCCCCCC-HHHHHHHHHHhCCC-cEEEEeCCC-C---CCCCh--HHHHHHHHHHHHHhcC
Q 013073 81 AKSCFVPVLFGHAVEDDFIN-PHHSDRIFEAYAGD-KNIIKFEGD-H---NSPRP--QFYFDSINIFFHNVLQ 145 (450)
Q Consensus 81 akkIkvPVLIIHGe~D~iVP-pe~Se~LyEalkgp-KeLvi~EGg-H---n~~~p--eeyle~Iv~FLk~~L~ 145 (450)
...+.+|+||+||++|++|+ .+...+++++++.+ +++++|+|+ | ++... +++++.+.+||.+.+.
T Consensus 224 ~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 224 APAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred cccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 45689999999999999999 89999999999985 699999997 6 44555 8999999999998754
No 25
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.41 E-value=1.7e-06 Score=85.83 Aligned_cols=63 Identities=16% Similarity=0.144 Sum_probs=51.1
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHHH
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHN 142 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk~ 142 (450)
+....+.+++||+|||||++|.+||+.+++.++ ...++++++| ||.. ..++.+.+.|..||++
T Consensus 305 ~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~----~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 305 DLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP----DGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred hHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc----CCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 445567789999999999999999999887664 3467888986 6976 4578888999999864
No 26
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.40 E-value=2.2e-06 Score=86.34 Aligned_cols=62 Identities=19% Similarity=0.247 Sum_probs=54.2
Q ss_pred hhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEeCCCCCC----C-ChHHHHHHHHHHHHH
Q 013073 81 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEGDHNS----P-RPQFYFDSINIFFHN 142 (450)
Q Consensus 81 akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~EGgHn~----~-~peeyle~Iv~FLk~ 142 (450)
+.++++|+|++||++|.++|+..++.+++.+++ .++++++++||.. . .+++++..|.+||.+
T Consensus 282 l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 282 LKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFPGGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred HHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcCCCCEEEEECchhHhhhhHHHHHHHHh
Confidence 557899999999999999999999999999886 5788999999865 1 257899999999975
No 27
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.40 E-value=9.5e-06 Score=74.99 Aligned_cols=64 Identities=22% Similarity=0.398 Sum_probs=50.5
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHH
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFH 141 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk 141 (450)
+....+.++++|+||++|++|.+ ++..++.+.+.++. .+++++++ ||.. ..++++.+.|..||+
T Consensus 222 ~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 222 DITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAG-SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred CHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccC-CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 34456778999999999999985 67888888877764 46777875 6965 458899999999984
No 28
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.38 E-value=3.7e-06 Score=81.39 Aligned_cols=65 Identities=17% Similarity=0.180 Sum_probs=53.1
Q ss_pred HHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHHHh
Q 013073 78 IKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHNV 143 (450)
Q Consensus 78 ik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk~~ 143 (450)
...+.++++|+|+|+|++|.++|.+.++.+.+..+ ..+++++++ ||.. ..++.+.+.|.+||+++
T Consensus 227 ~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 227 EELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDA-VEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred HHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCC-ccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 35577899999999999999999999998666543 457888876 6965 45899999999999753
No 29
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.33 E-value=6.2e-06 Score=83.22 Aligned_cols=62 Identities=18% Similarity=0.214 Sum_probs=52.2
Q ss_pred hhcc--CCCEEEEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEeCCC-CCC---CChHHHHHHHHHHHHH
Q 013073 81 AKSC--FVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEGD-HNS---PRPQFYFDSINIFFHN 142 (450)
Q Consensus 81 akkI--kvPVLIIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~EGg-Hn~---~~peeyle~Iv~FLk~ 142 (450)
+..+ ++|+|||||++|.+|+++.++.+++++.. .+++++++|+ |.. ..++++++.|.+||.+
T Consensus 264 ~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 264 IDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWISN 332 (332)
T ss_pred HhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhhC
Confidence 3445 69999999999999999999999998875 6889999985 854 3468899999999863
No 30
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.32 E-value=4.4e-07 Score=87.96 Aligned_cols=136 Identities=15% Similarity=0.111 Sum_probs=82.4
Q ss_pred ccc-cHHHHHHHHhccCC-CccEEEEeCCcC--CHH-HHHHHHHH---Hhh--ccCC-------hhhHHHHHHHHHHHHh
Q 013073 3 LTI-NIVYHSLLYGAEDP-SIAGMVLDSPFS--DLV-DLMMELVD---TYK--IRLP-------KFTVKFAIQYMRKAIQ 65 (450)
Q Consensus 3 l~~-sgGATALm~AAe~p-~IKgLILDSPFS--dL~-dl~~e~lk---~~~--~~LP-------~~~~~~~l~flr~~Ik 65 (450)
||- .||.|||+.|++++ .|..||+|++-+ +-. .++.+.++ +|. .+-| ..+-.....++.- +.
T Consensus 119 lGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~-v~ 197 (277)
T KOG2984|consen 119 LGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDV-VD 197 (277)
T ss_pred eeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHH-HH
Confidence 443 47889999999998 499999998633 322 22222221 120 0111 1000000111110 00
Q ss_pred hhhccccccccHH-HHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEe-CCCCCC--CChHHHHHHHHHHHH
Q 013073 66 KKAKFDITDLNTI-KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKF-EGDHNS--PRPQFYFDSINIFFH 141 (450)
Q Consensus 66 kr~gFdL~dlsPi-k~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~-EGgHn~--~~peeyle~Iv~FLk 141 (450)
...++-+-+.. ..+.+++||+||+||..|++|+-.|.--|-...+.. ++.++ +|+||+ ..++++...+.+||+
T Consensus 198 --qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a-~~~~~peGkHn~hLrya~eFnklv~dFl~ 274 (277)
T KOG2984|consen 198 --QFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLA-KVEIHPEGKHNFHLRYAKEFNKLVLDFLK 274 (277)
T ss_pred --HHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccc-eEEEccCCCcceeeechHHHHHHHHHHHh
Confidence 01122222322 346789999999999999999999998887776655 56666 567998 347889999999998
Q ss_pred H
Q 013073 142 N 142 (450)
Q Consensus 142 ~ 142 (450)
.
T Consensus 275 ~ 275 (277)
T KOG2984|consen 275 S 275 (277)
T ss_pred c
Confidence 5
No 31
>PRK07581 hypothetical protein; Validated
Probab=98.29 E-value=8e-06 Score=81.27 Aligned_cols=68 Identities=10% Similarity=0.077 Sum_probs=57.8
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC--CCCC--CChHHHHHHHHHHHHHhc
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG--DHNS--PRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG--gHn~--~~peeyle~Iv~FLk~~L 144 (450)
+....++++++|+|+|||++|.++|+..++.+.+.+++ .+++++++ ||.. ..++++...|.+||++.+
T Consensus 266 d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~-a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 266 DLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPN-AELRPIESIWGHLAGFGQNPADIAFIDAALKELL 337 (339)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEeCCCCCccccccCcHHHHHHHHHHHHHHH
Confidence 34566778999999999999999999999999888876 57888886 6954 468899999999999876
No 32
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.29 E-value=7.8e-06 Score=76.55 Aligned_cols=67 Identities=22% Similarity=0.309 Sum_probs=48.4
Q ss_pred HHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhC---CCcEEEEeCCC-CCCCC----------hHHHHHHHHHHHHHh
Q 013073 78 IKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYA---GDKNIIKFEGD-HNSPR----------PQFYFDSINIFFHNV 143 (450)
Q Consensus 78 ik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalk---gpKeLvi~EGg-Hn~~~----------peeyle~Iv~FLk~~ 143 (450)
...+.++++|+|+++|++|+++|.+..+++.+.+. .+.++++|+|. |.+.. .++.++++.+||+++
T Consensus 138 ~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 138 LEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp HHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred hhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 44566789999999999999999999999998873 36789999985 97622 347888999999987
Q ss_pred c
Q 013073 144 L 144 (450)
Q Consensus 144 L 144 (450)
|
T Consensus 218 L 218 (218)
T PF01738_consen 218 L 218 (218)
T ss_dssp -
T ss_pred C
Confidence 5
No 33
>PRK06489 hypothetical protein; Provisional
Probab=98.28 E-value=1.4e-05 Score=80.78 Aligned_cols=68 Identities=15% Similarity=0.221 Sum_probs=56.0
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHH--HHHHHHhCCCcEEEEeCC-----CCCC-CChHHHHHHHHHHHHHhc
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHS--DRIFEAYAGDKNIIKFEG-----DHNS-PRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~S--e~LyEalkgpKeLvi~EG-----gHn~-~~peeyle~Iv~FLk~~L 144 (450)
+....++++++|+|||+|++|.++|++.+ +.+.+.+++ .+++++++ ||.. ..++.+.+.|..||+.+-
T Consensus 283 d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~-a~l~~i~~a~~~~GH~~~e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 283 NPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKH-GRLVLIPASPETRGHGTTGSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred ChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC-CeEEEECCCCCCCCcccccCHHHHHHHHHHHHHhcc
Confidence 44567788999999999999999999976 788888775 47888887 7865 458899999999998653
No 34
>PLN02578 hydrolase
Probab=98.25 E-value=1.4e-05 Score=80.72 Aligned_cols=65 Identities=12% Similarity=0.252 Sum_probs=55.4
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCCC--CChHHHHHHHHHHHH
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNS--PRPQFYFDSINIFFH 141 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn~--~~peeyle~Iv~FLk 141 (450)
+..+.++++++|+|+|||++|.+||.+.++++.+.+++ .+++++++||.. ..++++.+.|.+||+
T Consensus 287 ~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~-a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 287 TLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPD-TTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 34556788999999999999999999999999998875 467777888975 568999999999985
No 35
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.25 E-value=7e-06 Score=79.52 Aligned_cols=65 Identities=14% Similarity=0.129 Sum_probs=50.3
Q ss_pred HhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHHHhc
Q 013073 80 VAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 80 ~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk~~L 144 (450)
.+.++++|+|||||++|.++++....++...+..+.+++++++ ||.. ..++++.+.|.+||++..
T Consensus 223 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 223 WLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred HhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhc
Confidence 3567899999999999999966656555554444567888865 6965 568999999999998764
No 36
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.24 E-value=1.8e-05 Score=74.85 Aligned_cols=66 Identities=9% Similarity=0.085 Sum_probs=54.2
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHHH
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHN 142 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk~ 142 (450)
+....++++++|+|||+|+.|.++|.+.++.+.+.+++ .+++++++ ||.. ..++.+.+.|.+|-++
T Consensus 187 ~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~-~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 187 DLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH-SESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred ccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCC-CeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 44556788999999999999999999999888888774 47888876 6965 5688999999988654
No 37
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.21 E-value=4.5e-06 Score=81.44 Aligned_cols=64 Identities=13% Similarity=0.097 Sum_probs=52.0
Q ss_pred HHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCC--cEEEEeCC-CCCC--CChHHHHHHHHHHHHHh
Q 013073 79 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGD--KNIIKFEG-DHNS--PRPQFYFDSINIFFHNV 143 (450)
Q Consensus 79 k~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgp--KeLvi~EG-gHn~--~~peeyle~Iv~FLk~~ 143 (450)
..+.++++|+|||||++|.++|+.. +.+.+.+++. +.++++++ ||.. ..++.+.+.|..||+.+
T Consensus 233 ~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 233 AVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred HhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 3467899999999999999999866 8888888753 24778887 6975 45889999999999753
No 38
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.16 E-value=4.1e-06 Score=78.86 Aligned_cols=102 Identities=16% Similarity=0.160 Sum_probs=67.2
Q ss_pred ccccc-HHHHHHHHhccCC-CccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHHH
Q 013073 2 LLTIN-IVYHSLLYGAEDP-SIAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIK 79 (450)
Q Consensus 2 ll~~s-gGATALm~AAe~p-~IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik 79 (450)
|+|.| ||++|+..+.+.| .+.|+|+.|++.-.... .... .
T Consensus 109 l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~-------------------------------~~~~------~- 150 (216)
T PF02230_consen 109 LGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE-------------------------------LEDR------P- 150 (216)
T ss_dssp EEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC-------------------------------CHCC------H-
T ss_pred hhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc-------------------------------cccc------c-
Confidence 45555 4556666666676 59999999987621000 0000 0
Q ss_pred HhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCC-CCCCCChHHHHHHHHHHHHHhc
Q 013073 80 VAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEG-DHNSPRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 80 ~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EG-gHn~~~peeyle~Iv~FLk~~L 144 (450)
-..-++|+|++||.+|++||++.+++.++.++. +.++..|+| ||.. ..+.++.+.+||++++
T Consensus 151 -~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i--~~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 151 -EALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI--SPEELRDLREFLEKHI 216 (216)
T ss_dssp -CCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----HHHHHHHHHHHHHH-
T ss_pred -cccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC--CHHHHHHHHHHHhhhC
Confidence 001278999999999999999999999998875 468899995 7975 3577888999998864
No 39
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.15 E-value=1.4e-05 Score=70.49 Aligned_cols=57 Identities=18% Similarity=0.321 Sum_probs=45.8
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHH
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYF 133 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyl 133 (450)
+....+.++++|+|+|+|++|.+++.+..+++.+.++ .+++++++| ||.. ..++++.
T Consensus 167 ~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~ 226 (228)
T PF12697_consen 167 DLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP-NAELVVIPGAGHFLFLEQPDEVA 226 (228)
T ss_dssp HHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST-TEEEEEETTSSSTHHHHSHHHHH
T ss_pred cccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCccHHHCHHHHh
Confidence 4456778899999999999999999999999998886 468999986 5974 3354443
No 40
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.12 E-value=5e-05 Score=77.22 Aligned_cols=65 Identities=17% Similarity=0.297 Sum_probs=50.1
Q ss_pred HHHHhhccCCCEEEEEeCCCCCCCHHHH-----HHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHHH
Q 013073 77 TIKVAKSCFVPVLFGHAVEDDFINPHHS-----DRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHN 142 (450)
Q Consensus 77 Pik~akkIkvPVLIIHGe~D~iVPpe~S-----e~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk~ 142 (450)
....+.++++|+|||||++|.++|+... +++.+.++ ..++++++| ||.. ..++++.+.|.+||.+
T Consensus 284 ~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip-~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 284 PIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLP-NVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred HHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCC-ceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 3456778999999999999999998743 23333344 367889987 6965 4589999999999975
No 41
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.11 E-value=1.5e-05 Score=81.30 Aligned_cols=67 Identities=16% Similarity=0.322 Sum_probs=56.8
Q ss_pred cHHHHhhccC-CCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHHHh
Q 013073 76 NTIKVAKSCF-VPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHNV 143 (450)
Q Consensus 76 sPik~akkIk-vPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk~~ 143 (450)
.....++++. ||+|||+|.+|+++|.+.++.+.+.+ ...+++.++| ||.. .+|+.+...|..|+++.
T Consensus 254 ~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~-pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 254 NLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKL-PNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred hHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhC-CCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 4455677776 99999999999999999999998888 4568999986 6754 56999999999999875
No 42
>PLN02442 S-formylglutathione hydrolase
Probab=98.10 E-value=1.2e-05 Score=79.33 Aligned_cols=126 Identities=13% Similarity=0.137 Sum_probs=76.2
Q ss_pred cccccHHHH-HHHHhccCCC-ccEEEEeCCcCCHHHHH--HHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccH
Q 013073 2 LLTINIVYH-SLLYGAEDPS-IAGMVLDSPFSDLVDLM--MELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNT 77 (450)
Q Consensus 2 ll~~sgGAT-ALm~AAe~p~-IKgLILDSPFSdL~dl~--~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsP 77 (450)
|.|.|+|+. |+.++.++|+ ++++++.+|+.++.... ...+..+ +..+. ..-......++
T Consensus 147 i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~----------------~~~~~~d~~~~ 209 (283)
T PLN02442 147 IFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWGQKAFTNY-LGSDK----------------ADWEEYDATEL 209 (283)
T ss_pred EEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchhhHHHHHH-cCCCh----------------hhHHHcChhhh
Confidence 456666654 5666667774 89999999987643110 0111110 00000 00001123355
Q ss_pred HHHhhccCCCEEEEEeCCCCCCCHH-HHHHHHHHhCC---CcEEEEeCC-CCCCCChHHHHHHHHHHHHHhc
Q 013073 78 IKVAKSCFVPVLFGHAVEDDFINPH-HSDRIFEAYAG---DKNIIKFEG-DHNSPRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 78 ik~akkIkvPVLIIHGe~D~iVPpe-~Se~LyEalkg---pKeLvi~EG-gHn~~~peeyle~Iv~FLk~~L 144 (450)
+..+...++|+||+||++|.+|+.. +++.+++.++. +.++.+++| +|+...-..+++....|..+.+
T Consensus 210 ~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~~~~~~i~~~~~~~~~~~ 281 (283)
T PLN02442 210 VSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYFFIATFIDDHINHHAQAL 281 (283)
T ss_pred hhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHHHHHHHHHHHHHHHHHHh
Confidence 5666668899999999999999974 57788877653 578999999 5986544445555555555443
No 43
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.06 E-value=2.3e-05 Score=81.61 Aligned_cols=138 Identities=12% Similarity=0.163 Sum_probs=101.4
Q ss_pred HHHHHHhccCCCccEEEEeC-CcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhh-hhccccccccHHHHhhccCC
Q 013073 9 YHSLLYGAEDPSIAGMVLDS-PFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQK-KAKFDITDLNTIKVAKSCFV 86 (450)
Q Consensus 9 ATALm~AAe~p~IKgLILDS-PFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikk-r~gFdL~dlsPik~akkIkv 86 (450)
=++-+.|+-+++|+|+|-.. ...++...+.+.++.|+-++|..+......-+-..+.. .+...+.-+||+.+..+..+
T Consensus 184 WTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~rL~~ 263 (367)
T PF10142_consen 184 WTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDRLTM 263 (367)
T ss_pred HHHHHhhccCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHhcCc
Confidence 35556667889999999764 67799999998888764344433322211111111111 11112344699999999999
Q ss_pred CEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhcCCC
Q 013073 87 PVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSPRPQFYFDSINIFFHNVLQPP 147 (450)
Q Consensus 87 PVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~~~peeyle~Iv~FLk~~L~~~ 147 (450)
|-|||.|..|++..+..+.-+|+.++|+|.|.+++. +|.... .+..+.+..|+...+...
T Consensus 264 PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~-~~~~~~l~~f~~~~~~~~ 324 (367)
T PF10142_consen 264 PKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG-SDVVQSLRAFYNRIQNGR 324 (367)
T ss_pred cEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch-HHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999988 598755 788999999999876533
No 44
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.06 E-value=7.1e-06 Score=82.44 Aligned_cols=130 Identities=21% Similarity=0.215 Sum_probs=88.9
Q ss_pred HHHHHHHHhccCCCccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhh--hhccccccccHHHHhhcc
Q 013073 7 IVYHSLLYGAEDPSIAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQK--KAKFDITDLNTIKVAKSC 84 (450)
Q Consensus 7 gGATALm~AAe~p~IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikk--r~gFdL~dlsPik~akkI 84 (450)
||+++|.+|+.+|+||+++++.||.+-..-+.+.... -++.-+..|.+..-.+ +.--.+.-++..+.+.++
T Consensus 186 GGglalaaaal~~rik~~~~~~Pfl~df~r~i~~~~~-------~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~Ri 258 (321)
T COG3458 186 GGGLALAAAALDPRIKAVVADYPFLSDFPRAIELATE-------GPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARI 258 (321)
T ss_pred CchhhhhhhhcChhhhcccccccccccchhheeeccc-------CcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhh
Confidence 6889999999999999999999987643322222100 0112222233211100 011123334677788899
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhc
Q 013073 85 FVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSPRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 85 kvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~~~peeyle~Iv~FLk~~L 144 (450)
++|+|+.-|-.|+++||..--..|+++.+.|.+.+|+- +|.. .+...-+++..|++...
T Consensus 259 K~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~-~p~~~~~~~~~~l~~l~ 318 (321)
T COG3458 259 KVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEG-GPGFQSRQQVHFLKILF 318 (321)
T ss_pred ccceEEeecccCCCCCChhhHHHhhcccCCceEEEeecccccc-CcchhHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999875 5864 44455566777887654
No 45
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.05 E-value=3.9e-05 Score=79.94 Aligned_cols=67 Identities=12% Similarity=0.131 Sum_probs=56.7
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCC--CCCC--CChHHHHHHHHHHHHH
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEG--DHNS--PRPQFYFDSINIFFHN 142 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EG--gHn~--~~peeyle~Iv~FLk~ 142 (450)
+....+.++++|+|+|+|+.|.++|+++++++.+.++. ..+++++++ ||.. ..++++.+.|.+||.+
T Consensus 314 dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 314 SLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 35567778999999999999999999999999999874 467888875 5864 5688999999999975
No 46
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.04 E-value=3.9e-05 Score=71.88 Aligned_cols=62 Identities=15% Similarity=0.085 Sum_probs=52.4
Q ss_pred HHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHH
Q 013073 79 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFH 141 (450)
Q Consensus 79 k~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk 141 (450)
..++++++|+|||+|++|.+||++.++.+.+.++. .++++++| ||.. ..++++.+.|.+||+
T Consensus 214 ~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 214 RDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPT-ATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred hhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccC-CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 45677899999999999999999999999888764 56888887 6975 458899999999984
No 47
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.04 E-value=5.6e-05 Score=77.52 Aligned_cols=68 Identities=13% Similarity=0.107 Sum_probs=56.4
Q ss_pred HHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCC---cEEEEeC--CCCCC--CChHHHHHHHHHHHHHhc
Q 013073 77 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGD---KNIIKFE--GDHNS--PRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 77 Pik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgp---KeLvi~E--GgHn~--~~peeyle~Iv~FLk~~L 144 (450)
..+.+++|++|+|+|+|++|.++|++.++++.+.+++. .++++++ .||.. ..++++.+.|.+||.+.-
T Consensus 301 ~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 301 LAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred HHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 35667889999999999999999999999999999863 2566663 47864 568899999999998754
No 48
>PLN02511 hydrolase
Probab=98.03 E-value=2.3e-05 Score=80.93 Aligned_cols=70 Identities=16% Similarity=0.111 Sum_probs=49.7
Q ss_pred ccHHHHhhccCCCEEEEEeCCCCCCCHHHH-HHHHHHhCCCcEEEEeCC-CCCC--CChHH------HHHHHHHHHHHhc
Q 013073 75 LNTIKVAKSCFVPVLFGHAVEDDFINPHHS-DRIFEAYAGDKNIIKFEG-DHNS--PRPQF------YFDSINIFFHNVL 144 (450)
Q Consensus 75 lsPik~akkIkvPVLIIHGe~D~iVPpe~S-e~LyEalkgpKeLvi~EG-gHn~--~~pee------yle~Iv~FLk~~L 144 (450)
.++...++++++|+|||||.+|+++|.... ..+.+..+ ..+++++++ ||.. ..+.. +.+.|.+||....
T Consensus 288 ~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p-~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 288 SSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANP-NCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred cCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCC-CEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHH
Confidence 345667889999999999999999998765 33433333 457888865 6964 22322 4688899998776
Q ss_pred C
Q 013073 145 Q 145 (450)
Q Consensus 145 ~ 145 (450)
.
T Consensus 367 ~ 367 (388)
T PLN02511 367 E 367 (388)
T ss_pred H
Confidence 4
No 49
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.02 E-value=5.7e-05 Score=81.09 Aligned_cols=59 Identities=14% Similarity=0.154 Sum_probs=51.5
Q ss_pred ccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC---CChHHHHHHHHHHHHH
Q 013073 83 SCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS---PRPQFYFDSINIFFHN 142 (450)
Q Consensus 83 kIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~---~~peeyle~Iv~FLk~ 142 (450)
++++|+|||||++|.++|++.++.+.+.+++ .++++++| ||.. .+++.+.+.|.+|...
T Consensus 416 ~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~-a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 416 QLKCDVAIFHGGDDELIPVECSYAVKAKVPR-ARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred hCCCCEEEEEECCCCCCCHHHHHHHHHhCCC-CEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 6899999999999999999999999999875 57888887 6974 4588999999999864
No 50
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.02 E-value=5.1e-05 Score=67.85 Aligned_cols=63 Identities=13% Similarity=0.236 Sum_probs=47.7
Q ss_pred HHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHH
Q 013073 77 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFH 141 (450)
Q Consensus 77 Pik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk 141 (450)
....+.++++|+|||+|++|..++ ...+++.+.++ ..+++++++ ||.. ..++.+.+.|..||+
T Consensus 186 ~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 186 LWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLP-NLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred hHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCC-CCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 345567899999999999998874 55666655544 467888887 6965 457889999999973
No 51
>PRK11460 putative hydrolase; Provisional
Probab=98.01 E-value=3.2e-05 Score=74.36 Aligned_cols=60 Identities=17% Similarity=0.070 Sum_probs=50.1
Q ss_pred cCCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCC-CCCCCChHHHHHHHHHHHHHhcC
Q 013073 84 CFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEG-DHNSPRPQFYFDSINIFFHNVLQ 145 (450)
Q Consensus 84 IkvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EG-gHn~~~peeyle~Iv~FLk~~L~ 145 (450)
..+|+|++||++|++||++.++++++.++. +.++++|+| +|... .+.++.+..||.+.++
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~--~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID--PRLMQFALDRLRYTVP 210 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC--HHHHHHHHHHHHHHcc
Confidence 478999999999999999999999998864 457888887 59863 5778888888888774
No 52
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.00 E-value=0.0001 Score=72.59 Aligned_cols=64 Identities=9% Similarity=0.048 Sum_probs=51.6
Q ss_pred HHhhcc-CCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhc
Q 013073 79 KVAKSC-FVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSPRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 79 k~akkI-kvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~~~peeyle~Iv~FLk~~L 144 (450)
+.+.++ ++|+|||||.+|.+||++.++++++.+++ +++++++| ||... .+..++.|.+|+...|
T Consensus 241 ~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~gH~~~-~~~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 241 DNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPE-AELKVTNNAGHSAF-DPNNLAALVHALETYL 306 (306)
T ss_pred HhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCC-CEEEEECCCCCCCC-ChHHHHHHHHHHHHhC
Confidence 345566 69999999999999999999999999874 67888886 69863 4456788888887654
No 53
>PRK10115 protease 2; Provisional
Probab=98.00 E-value=4.4e-05 Score=84.94 Aligned_cols=130 Identities=12% Similarity=0.152 Sum_probs=83.0
Q ss_pred cccccHHHHHHHHhc-cCCC-ccEEEEeCCcCCHHHHHHH-HHHH----h-hccCChhhHHHHHHHHHHHHhhhhccccc
Q 013073 2 LLTINIVYHSLLYGA-EDPS-IAGMVLDSPFSDLVDLMME-LVDT----Y-KIRLPKFTVKFAIQYMRKAIQKKAKFDIT 73 (450)
Q Consensus 2 ll~~sgGATALm~AA-e~p~-IKgLILDSPFSdL~dl~~e-~lk~----~-~~~LP~~~~~~~l~flr~~Ikkr~gFdL~ 73 (450)
+.|+|-|+..+.++. +.|+ ++|+|+..|+.|+...+.. .+.. + .++-|+-. .....+.
T Consensus 528 i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~--------------~~~~~l~ 593 (686)
T PRK10115 528 GMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDP--------------QYYEYMK 593 (686)
T ss_pred EEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCH--------------HHHHHHH
Confidence 356666665555444 5664 9999999999998765421 1000 0 01111100 0001134
Q ss_pred cccHHHHhhccCCC-EEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEe---C-CCCCCCC-hHHHHH---HHHHHHH
Q 013073 74 DLNTIKVAKSCFVP-VLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKF---E-GDHNSPR-PQFYFD---SINIFFH 141 (450)
Q Consensus 74 dlsPik~akkIkvP-VLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~---E-GgHn~~~-peeyle---~Iv~FLk 141 (450)
.++|+.++.+++.| +||+||.+|..||+.|+.+++.+++. +.+++++ + +||.... +...++ .+..||-
T Consensus 594 ~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~ 673 (686)
T PRK10115 594 SYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLI 673 (686)
T ss_pred HcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 56999999999999 66779999999999999999999864 4566666 4 4797532 333333 4467887
Q ss_pred HhcC
Q 013073 142 NVLQ 145 (450)
Q Consensus 142 ~~L~ 145 (450)
..++
T Consensus 674 ~~~~ 677 (686)
T PRK10115 674 ALAQ 677 (686)
T ss_pred HHhC
Confidence 7765
No 54
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.99 E-value=4.9e-05 Score=74.39 Aligned_cols=125 Identities=12% Similarity=0.142 Sum_probs=80.1
Q ss_pred cccccHHH-HHHHHhccCCC-ccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHHH
Q 013073 2 LLTINIVY-HSLLYGAEDPS-IAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIK 79 (450)
Q Consensus 2 ll~~sgGA-TALm~AAe~p~-IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik 79 (450)
|.|.|+|+ +|+.++.++|. ++++|+.+|+.+.... + +....+..++. . ..-.+...++..
T Consensus 142 ~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~------------~-~~~~~~~~~l~----~-~~~~~~~~~~~~ 203 (275)
T TIGR02821 142 ITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRC------------P-WGQKAFSAYLG----A-DEAAWRSYDASL 203 (275)
T ss_pred EEEEChhHHHHHHHHHhCcccceEEEEECCccCcccC------------c-chHHHHHHHhc----c-cccchhhcchHH
Confidence 45666654 55556667774 9999999998764210 0 00000011111 0 000111224444
Q ss_pred Hhhc--cCCCEEEEEeCCCCCCCH-HHHHHHHHHhCC---CcEEEEeCC-CCCCCChHHHHHHHHHHHHHhc
Q 013073 80 VAKS--CFVPVLFGHAVEDDFINP-HHSDRIFEAYAG---DKNIIKFEG-DHNSPRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 80 ~akk--IkvPVLIIHGe~D~iVPp-e~Se~LyEalkg---pKeLvi~EG-gHn~~~peeyle~Iv~FLk~~L 144 (450)
.+.+ ...|+||+||+.|.+||. .+++.++++++. +.++++++| +|.+.....++...+.|+.+++
T Consensus 204 ~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 204 LVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYFIASFIADHLRHHAERL 275 (275)
T ss_pred HHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchhHHHhHHHHHHHHHhhC
Confidence 4443 568999999999999999 678888887654 568889999 6999888888888888987753
No 55
>PRK10673 acyl-CoA esterase; Provisional
Probab=97.99 E-value=5.3e-05 Score=70.76 Aligned_cols=61 Identities=13% Similarity=0.279 Sum_probs=51.1
Q ss_pred hhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHHH
Q 013073 81 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHN 142 (450)
Q Consensus 81 akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk~ 142 (450)
+..+++|+|+|+|++|.+++.+..+.+.+.+++ .++++++| ||.. ..++.+.+.|..||..
T Consensus 191 ~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 191 IPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQ-ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred cCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCC-cEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 456789999999999999999999999888775 46777876 6965 4588999999999975
No 56
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.94 E-value=2.6e-05 Score=73.09 Aligned_cols=72 Identities=22% Similarity=0.337 Sum_probs=59.2
Q ss_pred ccccHHHHhhccC-CCEEEEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEeCC-CCCCCC---h--HHHHHHHHHHHHHhc
Q 013073 73 TDLNTIKVAKSCF-VPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEG-DHNSPR---P--QFYFDSINIFFHNVL 144 (450)
Q Consensus 73 ~dlsPik~akkIk-vPVLIIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~EG-gHn~~~---p--eeyle~Iv~FLk~~L 144 (450)
...++...+.++. +|+|++||.+|.+||..++..+|..+.+ +++++++++ +|+... + .++++.+..||.+.+
T Consensus 219 ~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 219 LLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred ccCcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 3345666666776 7999999999999999999999999998 778888766 598742 2 389999999999875
No 57
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.94 E-value=0.00015 Score=75.49 Aligned_cols=71 Identities=15% Similarity=0.104 Sum_probs=56.9
Q ss_pred HHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHHHhcCCCC
Q 013073 77 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHNVLQPPE 148 (450)
Q Consensus 77 Pik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk~~L~~~~ 148 (450)
....+.++++|+|||+|.+|.+++ ..++++++......+++++++ ||.. ..++.+.+.|..|++.+++...
T Consensus 317 ~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~~ 390 (402)
T PLN02894 317 LLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPDR 390 (402)
T ss_pred HhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCCc
Confidence 345677899999999999998765 777777777755567888987 5864 4588999999999999987644
No 58
>PRK10985 putative hydrolase; Provisional
Probab=97.85 E-value=0.00019 Score=71.82 Aligned_cols=69 Identities=17% Similarity=0.197 Sum_probs=49.2
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC-C-----ChH-HHHHHHHHHHHHhcC
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS-P-----RPQ-FYFDSINIFFHNVLQ 145 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~-~-----~pe-eyle~Iv~FLk~~L~ 145 (450)
+....++++++|+|||+|++|.+++++....+.+..+ ..+++++++ ||.. . .+. -..+.+.+||...++
T Consensus 246 ~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 246 SALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPP-NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred ChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCC-CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhc
Confidence 4456778899999999999999999988877754443 456677765 6853 1 122 344678889977654
No 59
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.85 E-value=7.7e-05 Score=67.36 Aligned_cols=60 Identities=18% Similarity=0.308 Sum_probs=47.5
Q ss_pred HHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHH
Q 013073 77 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSIN 137 (450)
Q Consensus 77 Pik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv 137 (450)
+...+.++++|+|+|+|++|.++|++.+..+.+.+++ .+++++++ ||.. ..++++.+.|.
T Consensus 167 ~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 167 PSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN-SQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT-EEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC-CEEEECCCCChHHHhcCHHhhhhhhc
Confidence 4456678999999999999999999999998877776 67888888 7985 34555555543
No 60
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=97.80 E-value=4e-05 Score=75.11 Aligned_cols=131 Identities=16% Similarity=0.101 Sum_probs=79.3
Q ss_pred HHHHHHHHhccCCCccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHH-Hhhhhccccccc--------cH
Q 013073 7 IVYHSLLYGAEDPSIAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKA-IQKKAKFDITDL--------NT 77 (450)
Q Consensus 7 gGATALm~AAe~p~IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~-Ikkr~gFdL~dl--------sP 77 (450)
||-+++.||.+...|.-+|-.++-.++...+.+.+.. ..+.++..- -|+... -+.+.++.+... +.
T Consensus 115 Gg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~---~~l~~ike~--Gfid~~~rkG~y~~rvt~eSlmdrLntd~ 189 (269)
T KOG4667|consen 115 GGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGE---DYLERIKEQ--GFIDVGPRKGKYGYRVTEESLMDRLNTDI 189 (269)
T ss_pred ccHHHHHHHHhhcCchheEEcccccchhcchhhhhcc---cHHHHHHhC--CceecCcccCCcCceecHHHHHHHHhchh
Confidence 5678899999999999999999877766555433211 000000000 000000 000011111111 22
Q ss_pred HHHhhc--cCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCC-CCCCChH-HHHHHHHHHHHHh
Q 013073 78 IKVAKS--CFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGD-HNSPRPQ-FYFDSINIFFHNV 143 (450)
Q Consensus 78 ik~akk--IkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGg-Hn~~~pe-eyle~Iv~FLk~~ 143 (450)
.+...+ ..||+|-+||..|.+||.+.|++|.+.+++ +.|.+++|+ |++...+ +.......|++-+
T Consensus 190 h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L~iIEgADHnyt~~q~~l~~lgl~f~k~r 258 (269)
T KOG4667|consen 190 HEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKLEIIEGADHNYTGHQSQLVSLGLEFIKTR 258 (269)
T ss_pred hhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC-CceEEecCCCcCccchhhhHhhhcceeEEee
Confidence 222233 579999999999999999999999999998 789999997 9986644 4444455555433
No 61
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.78 E-value=0.00028 Score=65.59 Aligned_cols=59 Identities=10% Similarity=0.132 Sum_probs=45.1
Q ss_pred HHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHHH
Q 013073 77 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHN 142 (450)
Q Consensus 77 Pik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk~ 142 (450)
....+.++++|+|+|||++|..+. .+.+.. ..+++++++ ||.. ..++++.+.|..||++
T Consensus 180 ~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 180 LRPALQALTFPFYYLCGERDSKFQ-----ALAQQL--ALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred HHHHhhccCCCeEEEEeCCcchHH-----HHHHHh--cCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 345677899999999999998653 222322 468888987 6975 5689999999999974
No 62
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.77 E-value=7.4e-06 Score=78.23 Aligned_cols=143 Identities=17% Similarity=0.186 Sum_probs=67.8
Q ss_pred cccccHHH-HHHHHhccCCCccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHH--HHHHHHhhhhcccccc----
Q 013073 2 LLTINIVY-HSLLYGAEDPSIAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQ--YMRKAIQKKAKFDITD---- 74 (450)
Q Consensus 2 ll~~sgGA-TALm~AAe~p~IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~--flr~~Ikkr~gFdL~d---- 74 (450)
|+|+|-|+ .||+.|+..+.|+++|+.+|..-...-.... ......+|.+....... ...........+....
T Consensus 26 i~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~-~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (213)
T PF08840_consen 26 IIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFY-RDSSKPLPYLPFDISKFSWNEPGLLRSRYAFELADDKAV 104 (213)
T ss_dssp EEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEE-TTE--EE----B-GGG-EE-TTS-EE-TT-B--TTTGGG
T ss_pred EEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcc-cCCCccCCcCCcChhhceecCCcceehhhhhhccccccc
Confidence 57787555 6777778889999999998755332110000 00000122221110000 0000000000011000
Q ss_pred ccHHHHhhccCCCEEEEEeCCCCCCCH-HHHHHHHHHhCC-----CcEEEEeCC-CCCCC-------C------------
Q 013073 75 LNTIKVAKSCFVPVLFGHAVEDDFINP-HHSDRIFEAYAG-----DKNIIKFEG-DHNSP-------R------------ 128 (450)
Q Consensus 75 lsPik~akkIkvPVLIIHGe~D~iVPp-e~Se~LyEalkg-----pKeLvi~EG-gHn~~-------~------------ 128 (450)
-...--+.++++|+|||+|++|.+.|- ..++.+.++++. ..+++.|++ ||... .
T Consensus 105 ~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~ 184 (213)
T PF08840_consen 105 EEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLA 184 (213)
T ss_dssp CCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE
T ss_pred ccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCccc
Confidence 011224678999999999999999996 555666666653 246788887 58430 0
Q ss_pred -----------hHHHHHHHHHHHHHhcC
Q 013073 129 -----------PQFYFDSINIFFHNVLQ 145 (450)
Q Consensus 129 -----------peeyle~Iv~FLk~~L~ 145 (450)
..+-+.+|++||+++|+
T Consensus 185 ~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 185 WGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp --B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 23678899999999986
No 63
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.72 E-value=8.7e-05 Score=83.59 Aligned_cols=130 Identities=16% Similarity=0.197 Sum_probs=89.2
Q ss_pred cccccHHH-HHHHHhccCC-C-ccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHH
Q 013073 2 LLTINIVY-HSLLYGAEDP-S-IAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTI 78 (450)
Q Consensus 2 ll~~sgGA-TALm~AAe~p-~-IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPi 78 (450)
+.|.+-|+ +++..++.++ . ++|.|+.+|.+++. +.........+++|.-.... +.+.++.
T Consensus 612 i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~terymg~p~~~~~~----------------y~e~~~~ 674 (755)
T KOG2100|consen 612 IWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTYTERYMGLPSENDKG----------------YEESSVS 674 (755)
T ss_pred EeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecccccHhhcCCCccccch----------------hhhcccc
Confidence 34555444 4444445554 3 88889999999998 44332211113444321111 3344666
Q ss_pred HHhhccCCCE-EEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCC-CCCCCC---hHHHHHHHHHHHHHhcCCCC
Q 013073 79 KVAKSCFVPV-LFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEG-DHNSPR---PQFYFDSINIFFHNVLQPPE 148 (450)
Q Consensus 79 k~akkIkvPV-LIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EG-gHn~~~---peeyle~Iv~FLk~~L~~~~ 148 (450)
..+..++.|. |+|||+.|+.|+++|+.+|+++++. +.++.+|++ +|.... ...+...+..||..++..+.
T Consensus 675 ~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~~~ 752 (755)
T KOG2100|consen 675 SPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGSPV 752 (755)
T ss_pred chhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCccc
Confidence 6677777666 9999999999999999999999864 578889988 598744 36899999999997776443
No 64
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.67 E-value=0.00045 Score=71.98 Aligned_cols=57 Identities=11% Similarity=0.135 Sum_probs=49.1
Q ss_pred ccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHH
Q 013073 83 SCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFH 141 (450)
Q Consensus 83 kIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk 141 (450)
++++|+|||+|+.|.+++++.++++++.. ..++.++++ ||.. ..++++.+.|..||.
T Consensus 323 ~i~vPvLiI~G~~D~~v~~~~~~~~a~~~--~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 323 NWKTPITVCWGLRDRWLNYDGVEDFCKSS--QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred cCCCCEEEEeeCCCCCcCHHHHHHHHHhc--CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 57999999999999999999999988874 457888987 6865 458999999999986
No 65
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.65 E-value=0.00026 Score=69.34 Aligned_cols=65 Identities=20% Similarity=0.367 Sum_probs=57.7
Q ss_pred hccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCCChHHHHHHHHHHHHHhcCCC
Q 013073 82 KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSPRPQFYFDSINIFFHNVLQPP 147 (450)
Q Consensus 82 kkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn~~~peeyle~Iv~FLk~~L~~~ 147 (450)
..+++|.|.|.|+.|++||...++.||+.+..+ .++.-+|||..+....|.+.|.+||+..++..
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-~vl~HpggH~VP~~~~~~~~i~~fi~~~~~~~ 224 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDA-TVLEHPGGHIVPNKAKYKEKIADFIQSFLQEE 224 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCC-eEEecCCCccCCCchHHHHHHHHHHHHHHHhh
Confidence 358999999999999999999999999999987 56667899999888899999999999877543
No 66
>COG0400 Predicted esterase [General function prediction only]
Probab=97.64 E-value=0.00014 Score=70.11 Aligned_cols=60 Identities=22% Similarity=0.341 Sum_probs=49.7
Q ss_pred ccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCCCCCCCChHHHHHHHHHHHHHhc
Q 013073 83 SCFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGDHNSPRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 83 kIkvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EGgHn~~~peeyle~Iv~FLk~~L 144 (450)
...+|+|++||+.|++||...+.++.+.+.. ..+..++++||.- +.+.++.+..||.+.+
T Consensus 144 ~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i--~~e~~~~~~~wl~~~~ 206 (207)
T COG0400 144 LAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEI--PPEELEAARSWLANTL 206 (207)
T ss_pred cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcC--CHHHHHHHHHHHHhcc
Confidence 3578999999999999999999999987653 5788888999974 4567778888998764
No 67
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.63 E-value=0.00046 Score=67.58 Aligned_cols=65 Identities=14% Similarity=0.086 Sum_probs=45.2
Q ss_pred HHHhhccCCCEEEEEeCCCCCCCHHH-----HHHHHHHhC-CCcEEEEeCC-CCCCCC---hHHHHHHHHHHHHH
Q 013073 78 IKVAKSCFVPVLFGHAVEDDFINPHH-----SDRIFEAYA-GDKNIIKFEG-DHNSPR---PQFYFDSINIFFHN 142 (450)
Q Consensus 78 ik~akkIkvPVLIIHGe~D~iVPpe~-----Se~LyEalk-gpKeLvi~EG-gHn~~~---peeyle~Iv~FLk~ 142 (450)
.+.+..+++|+||++|..|..++.-. +.+..+.+. ..+++..+++ +|.... ++++.+.|.+||++
T Consensus 200 ~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 200 KAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred HHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 34556789999999999998864211 133333343 3567888876 597632 57899999999963
No 68
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=97.61 E-value=0.00035 Score=66.32 Aligned_cols=125 Identities=18% Similarity=0.198 Sum_probs=76.7
Q ss_pred cccccHHHHHHHHhccCCCccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHHHHh
Q 013073 2 LLTINIVYHSLLYGAEDPSIAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIKVA 81 (450)
Q Consensus 2 ll~~sgGATALm~AAe~p~IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik~a 81 (450)
|+|-|+|+--..+.++.-.+++ |+..|.......+...+... ..+..-..+. +....+. .++.+... .
T Consensus 63 liGSSlGG~~A~~La~~~~~~a-vLiNPav~p~~~l~~~iG~~--~~~~~~e~~~--~~~~~~~-----~l~~l~~~--~ 130 (187)
T PF05728_consen 63 LIGSSLGGFYATYLAERYGLPA-VLINPAVRPYELLQDYIGEQ--TNPYTGESYE--LTEEHIE-----ELKALEVP--Y 130 (187)
T ss_pred EEEEChHHHHHHHHHHHhCCCE-EEEcCCCCHHHHHHHhhCcc--ccCCCCccce--echHhhh-----hcceEecc--c
Confidence 6777877766655555555777 88899888887777665331 1111000000 0000000 01111100 0
Q ss_pred hccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCCChHHHHHHHHHHHH
Q 013073 82 KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSPRPQFYFDSINIFFH 141 (450)
Q Consensus 82 kkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn~~~peeyle~Iv~FLk 141 (450)
.....++|++|++.|+++++..+...|. +.++++...|+|.+..-++++..|.+|+.
T Consensus 131 ~~~~~~~lvll~~~DEvLd~~~a~~~~~---~~~~~i~~ggdH~f~~f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 131 PTNPERYLVLLQTGDEVLDYREAVAKYR---GCAQIIEEGGDHSFQDFEEYLPQIIAFLQ 187 (187)
T ss_pred cCCCccEEEEEecCCcccCHHHHHHHhc---CceEEEEeCCCCCCccHHHHHHHHHHhhC
Confidence 2346799999999999999977766554 44566666667999988999999999973
No 69
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.57 E-value=0.0008 Score=65.97 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=45.5
Q ss_pred CCCEEEEEeCCCCCCCHH-HHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHH
Q 013073 85 FVPVLFGHAVEDDFINPH-HSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFF 140 (450)
Q Consensus 85 kvPVLIIHGe~D~iVPpe-~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FL 140 (450)
++|+|||+|++|.++++. .++++.+.+++ .+++++++ ||.. ..|+++.+.|.+||
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip~-~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFPD-HVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcCC-CeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 899999999999998765 56778787775 57888876 6976 45889999999987
No 70
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=97.56 E-value=0.00015 Score=72.86 Aligned_cols=63 Identities=8% Similarity=0.076 Sum_probs=54.1
Q ss_pred hhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC--CCCC--CChHHHHHHHHHHHHHh
Q 013073 81 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG--DHNS--PRPQFYFDSINIFFHNV 143 (450)
Q Consensus 81 akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG--gHn~--~~peeyle~Iv~FLk~~ 143 (450)
+.++++|+|+|+|++|.++|+..++++++.+....+++++++ ||.. ..++++.+.|.+||.++
T Consensus 273 l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 273 PEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRST 339 (343)
T ss_pred hhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhc
Confidence 467899999999999999999999999998865567888863 7965 56899999999999765
No 71
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=97.39 E-value=0.00034 Score=70.52 Aligned_cols=64 Identities=14% Similarity=0.102 Sum_probs=52.2
Q ss_pred HHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEE---E-EeCC-CCCC--CChHHHHHHHHHHHH
Q 013073 78 IKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNI---I-KFEG-DHNS--PRPQFYFDSINIFFH 141 (450)
Q Consensus 78 ik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeL---v-i~EG-gHn~--~~peeyle~Iv~FLk 141 (450)
.+.++++++|+|+|+|++|.++|+..++.+.+.+++.+.. + ++++ ||.. ..++++.+.|.+||+
T Consensus 281 ~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 281 TEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred HHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 4677889999999999999999999999999999874322 2 4454 7864 568899999999984
No 72
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.38 E-value=0.0012 Score=80.32 Aligned_cols=67 Identities=13% Similarity=0.255 Sum_probs=54.2
Q ss_pred HHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCC-----------cEEEEeCC-CCCC--CChHHHHHHHHHHHHH
Q 013073 77 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGD-----------KNIIKFEG-DHNS--PRPQFYFDSINIFFHN 142 (450)
Q Consensus 77 Pik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgp-----------KeLvi~EG-gHn~--~~peeyle~Iv~FLk~ 142 (450)
....++++++|+|+|+|++|.+++ ..++++.+.+++. .+++++++ ||.. ..++.+.+.|..||.+
T Consensus 1560 l~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1560 LWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred HHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 345678899999999999999885 7788888876641 37888987 6965 5688999999999997
Q ss_pred hc
Q 013073 143 VL 144 (450)
Q Consensus 143 ~L 144 (450)
.-
T Consensus 1639 ~~ 1640 (1655)
T PLN02980 1639 LH 1640 (1655)
T ss_pred cc
Confidence 53
No 73
>PLN02965 Probable pheophorbidase
Probab=97.36 E-value=0.00062 Score=64.88 Aligned_cols=61 Identities=18% Similarity=0.341 Sum_probs=52.3
Q ss_pred hhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHHH
Q 013073 81 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHN 142 (450)
Q Consensus 81 akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk~ 142 (450)
+..+++|+|+|+|++|.++|+..++.+.+.+++. ++++++| ||.. .+++++.+.|.+|++.
T Consensus 189 ~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a-~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 189 PEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPA-QTYVLEDSDHSAFFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred hhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcc-eEEEecCCCCchhhcCHHHHHHHHHHHHHH
Confidence 3468999999999999999999999999998864 5777876 7965 5699999999999764
No 74
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.33 E-value=0.00032 Score=66.67 Aligned_cols=54 Identities=24% Similarity=0.432 Sum_probs=38.2
Q ss_pred hccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCCChHHHHHH
Q 013073 82 KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSPRPQFYFDS 135 (450)
Q Consensus 82 kkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn~~~peeyle~ 135 (450)
..+.+|+|.|+|.+|.+++.+.++.|++.+....+++..+|||..+....+.+.
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~gGH~vP~~~~~~~~ 211 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDGGHHVPRKKEDVDK 211 (212)
T ss_dssp TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESSSSS----HHHHHH
T ss_pred ccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECCCCcCcCChhhccC
Confidence 457999999999999999999999999998754678888999998776665543
No 75
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.31 E-value=0.00097 Score=68.79 Aligned_cols=71 Identities=18% Similarity=0.249 Sum_probs=49.5
Q ss_pred ccHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEe-CCCCCC-----C-ChH-HHHHHHHHHHHHhcC
Q 013073 75 LNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKF-EGDHNS-----P-RPQ-FYFDSINIFFHNVLQ 145 (450)
Q Consensus 75 lsPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~-EGgHn~-----~-~pe-eyle~Iv~FLk~~L~ 145 (450)
.+.+..+.+|.+|+||||+.+|++++++.--+.-........+.+. .|||.- . ++. ...++|.+||...++
T Consensus 264 aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 264 ASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred ccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 4567788899999999999999999987665554433323445555 478942 1 233 455789999988764
No 76
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.31 E-value=0.0015 Score=68.97 Aligned_cols=62 Identities=11% Similarity=0.027 Sum_probs=50.8
Q ss_pred hhccC-CCEEEEEeCCCCCCCHHHHHHHHHHh---CC-CcEEEEe-CCCCCC-----CChHHHHHHHHHHHHH
Q 013073 81 AKSCF-VPVLFGHAVEDDFINPHHSDRIFEAY---AG-DKNIIKF-EGDHNS-----PRPQFYFDSINIFFHN 142 (450)
Q Consensus 81 akkIk-vPVLIIHGe~D~iVPpe~Se~LyEal---kg-pKeLvi~-EGgHn~-----~~peeyle~Iv~FLk~ 142 (450)
+++|+ +|+|.|-|+.|.+||+.+++.+.+.+ +. .|..+.. +|||.- ..+.+++-.|.+||.+
T Consensus 333 l~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 333 PGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred HHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 35788 99999999999999999999999986 43 4656665 668943 3477899999999975
No 77
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.29 E-value=0.0037 Score=61.32 Aligned_cols=59 Identities=15% Similarity=0.379 Sum_probs=49.7
Q ss_pred cc-CCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCCC--CChHHHHHHHHHHHHH
Q 013073 83 SC-FVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNS--PRPQFYFDSINIFFHN 142 (450)
Q Consensus 83 kI-kvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn~--~~peeyle~Iv~FLk~ 142 (450)
++ ++|+|+|+|++|+.+|++..+.+.+.+++. +++.+++||.. ..|+++.+.|.++...
T Consensus 208 ~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~-~~~~l~~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 208 DIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPS-QVYELESDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred ccCccceEEEEeCCCCCCCHHHHHHHHHhCCcc-EEEEECCCCCccccCHHHHHHHHHHHHHH
Confidence 45 789999999999999999999999998764 67778989964 5688888888877654
No 78
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.29 E-value=0.00078 Score=73.69 Aligned_cols=45 Identities=11% Similarity=0.003 Sum_probs=42.4
Q ss_pred hhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCC
Q 013073 81 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHN 125 (450)
Q Consensus 81 akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn 125 (450)
+++|+||+|+|-|+.|.+||++.+.++.+.++++++++..+|||.
T Consensus 437 L~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~gGHI 481 (560)
T TIGR01839 437 LKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSNSGHI 481 (560)
T ss_pred hhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecCCCcc
Confidence 568999999999999999999999999999998999999999994
No 79
>PRK10162 acetyl esterase; Provisional
Probab=97.21 E-value=0.0016 Score=65.48 Aligned_cols=60 Identities=17% Similarity=0.222 Sum_probs=48.0
Q ss_pred cCCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCCC-CCCCC-------hHHHHHHHHHHHHHhcC
Q 013073 84 CFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGD-HNSPR-------PQFYFDSINIFFHNVLQ 145 (450)
Q Consensus 84 IkvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EGg-Hn~~~-------peeyle~Iv~FLk~~L~ 145 (450)
.-.|+||++|+.|.+++ +++.+++++.. +.+++.++|. |.+.. ..+.++.+..||++.+.
T Consensus 247 ~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 247 DVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred CCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 34799999999999874 88889888754 5789999996 97621 35788899999998764
No 80
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.18 E-value=0.0025 Score=61.07 Aligned_cols=57 Identities=23% Similarity=0.333 Sum_probs=47.1
Q ss_pred cCCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCCC-CCC---CChHHHHHHHHHHH
Q 013073 84 CFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGD-HNS---PRPQFYFDSINIFF 140 (450)
Q Consensus 84 IkvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EGg-Hn~---~~peeyle~Iv~FL 140 (450)
..+|-|+|.+++|.+||++..+++.+..+. +.+...|++. |.. .++++|++.|.+|+
T Consensus 177 ~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 177 SRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 569999999999999999999999987654 4566677774 654 66999999999884
No 81
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.16 E-value=0.0022 Score=69.82 Aligned_cols=47 Identities=21% Similarity=0.092 Sum_probs=39.4
Q ss_pred HHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCC
Q 013073 79 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHN 125 (450)
Q Consensus 79 k~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn 125 (450)
..+.++++|+|+|+|++|.++|+..++.+.+.+++.+.+++.++||.
T Consensus 409 ~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi 455 (532)
T TIGR01838 409 LDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHI 455 (532)
T ss_pred cchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCc
Confidence 35677999999999999999999999999999887655555566785
No 82
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=97.13 E-value=0.0027 Score=67.19 Aligned_cols=133 Identities=17% Similarity=0.153 Sum_probs=69.9
Q ss_pred ccccc-HHHHHHHHhc-cCCCccEEEEeCCcCC-HHHHHHHHHHHhhccCChhhHHHHHHHHH-------HHHhhhhccc
Q 013073 2 LLTIN-IVYHSLLYGA-EDPSIAGMVLDSPFSD-LVDLMMELVDTYKIRLPKFTVKFAIQYMR-------KAIQKKAKFD 71 (450)
Q Consensus 2 ll~~s-gGATALm~AA-e~p~IKgLILDSPFSd-L~dl~~e~lk~~~~~LP~~~~~~~l~flr-------~~Ikkr~gFd 71 (450)
++|++ ||-.|+..|. +.++|+|+|+.+|... +..-.. . ...+|....+.+..-+. ........|.
T Consensus 265 ~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~-~----~~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~S 339 (411)
T PF06500_consen 265 AWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPE-W----QQRVPDMYLDVLASRLGMAAVSDESLRGELNKFS 339 (411)
T ss_dssp EEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HH-H----HTTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGS
T ss_pred EEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHH-H----HhcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcC
Confidence 57888 6666777765 5679999999998532 221111 1 12345432221000000 0000111122
Q ss_pred cccccHHHHh--hccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCC-CCCCChHHHHHHHHHHHHHhc
Q 013073 72 ITDLNTIKVA--KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGD-HNSPRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 72 L~dlsPik~a--kkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGg-Hn~~~peeyle~Iv~FLk~~L 144 (450)
++. --.+ .++++|+|.|.|++|.+.|.+..+.|+..-...|.+.+..+. |. ....-+..+..||+..|
T Consensus 340 Lk~---qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~~~~--gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 340 LKT---QGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKPLHM--GYPQALDEIYKWLEDKL 410 (411)
T ss_dssp TTT---TTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSSHHH--HHHHHHHHHHHHHHHHH
T ss_pred cch---hccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCcccc--chHHHHHHHHHHHHHhc
Confidence 211 0123 568999999999999999999999887765545555555555 64 23477889999998865
No 83
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.11 E-value=0.0027 Score=61.96 Aligned_cols=65 Identities=25% Similarity=0.351 Sum_probs=54.1
Q ss_pred hhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCCC-CCCCC-------------hHHHHHHHHHHHHHh
Q 013073 81 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGD-HNSPR-------------PQFYFDSINIFFHNV 143 (450)
Q Consensus 81 akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EGg-Hn~~~-------------peeyle~Iv~FLk~~ 143 (450)
..++++|+|+++|..|..+|...-+.|.+++.. ...+.+|.|+ |.+.. .+.-++++..||++.
T Consensus 154 ~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 154 APKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred cccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 557999999999999999999999999988764 3678899997 85531 347889999999988
Q ss_pred cC
Q 013073 144 LQ 145 (450)
Q Consensus 144 L~ 145 (450)
++
T Consensus 234 ~~ 235 (236)
T COG0412 234 LG 235 (236)
T ss_pred cc
Confidence 75
No 84
>PRK05855 short chain dehydrogenase; Validated
Probab=96.98 E-value=0.0011 Score=69.66 Aligned_cols=61 Identities=18% Similarity=0.152 Sum_probs=51.3
Q ss_pred ccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCCC--CChHHHHHHHHHHHHHhc
Q 013073 83 SCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNS--PRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 83 kIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn~--~~peeyle~Iv~FLk~~L 144 (450)
.+++|+|+|||++|.+||++..+.+++.+++ .+++++++||.. ..++.+.+.|..||...-
T Consensus 231 ~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 231 YTDVPVQLIVPTGDPYVRPALYDDLSRWVPR-LWRREIKAGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred CccCceEEEEeCCCcccCHHHhccccccCCc-ceEEEccCCCcchhhChhHHHHHHHHHHHhcc
Confidence 4889999999999999999999998876654 567778889975 458899999999998643
No 85
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=96.88 E-value=0.0022 Score=59.02 Aligned_cols=103 Identities=18% Similarity=0.190 Sum_probs=57.6
Q ss_pred CCccEEEEeCCcCCH-HH---HHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHHHH-hhccCCCEEEEEe
Q 013073 19 PSIAGMVLDSPFSDL-VD---LMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIKV-AKSCFVPVLFGHA 93 (450)
Q Consensus 19 p~IKgLILDSPFSdL-~d---l~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik~-akkIkvPVLIIHG 93 (450)
+.++++|+.+|..++ .. ..... ... ...+.+....+..+.+.... ....+-..++|+.. --+--.|+||+||
T Consensus 98 ~~~~~~~~~~p~~d~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~sp~~~~~~~~~Pp~~i~~g 174 (211)
T PF07859_consen 98 PKPKGIILISPWTDLQDFDGPSYDDS-NEN-KDDPFLPAPKIDWFWKLYLP-GSDRDDPLASPLNASDLKGLPPTLIIHG 174 (211)
T ss_dssp CHESEEEEESCHSSTSTSSCHHHHHH-HHH-STTSSSBHHHHHHHHHHHHS-TGGTTSTTTSGGGSSCCTTCHEEEEEEE
T ss_pred cchhhhhcccccccchhccccccccc-ccc-cccccccccccccccccccc-cccccccccccccccccccCCCeeeecc
Confidence 459999999999877 11 11101 010 11122222222222221121 11111223456654 1122469999999
Q ss_pred CCCCCCCHHHHHHHHHHhCC---CcEEEEeCCC-CCC
Q 013073 94 VEDDFINPHHSDRIFEAYAG---DKNIIKFEGD-HNS 126 (450)
Q Consensus 94 e~D~iVPpe~Se~LyEalkg---pKeLvi~EGg-Hn~ 126 (450)
+.|.++ .++++|+++++. +.++++++|. |.+
T Consensus 175 ~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 175 EDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGF 209 (211)
T ss_dssp TTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTG
T ss_pred ccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEe
Confidence 999875 588999998864 5689999996 975
No 86
>PLN02872 triacylglycerol lipase
Probab=96.74 E-value=0.0045 Score=64.96 Aligned_cols=65 Identities=11% Similarity=0.238 Sum_probs=54.3
Q ss_pred hhcc--CCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC-----CChHHHHHHHHHHHHHhcC
Q 013073 81 AKSC--FVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS-----PRPQFYFDSINIFFHNVLQ 145 (450)
Q Consensus 81 akkI--kvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~-----~~peeyle~Iv~FLk~~L~ 145 (450)
+.++ ++|++|++|++|.++++..++++++.++...+++.+++ +|.. ..++.+++.|.+||+++++
T Consensus 319 l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 319 LSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred cccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 4556 58999999999999999999999999987567888887 6952 3478899999999997654
No 87
>PRK07868 acyl-CoA synthetase; Validated
Probab=96.74 E-value=0.0031 Score=72.85 Aligned_cols=65 Identities=15% Similarity=0.040 Sum_probs=54.0
Q ss_pred hhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcE-EEEeCCCCCC-----CChHHHHHHHHHHHHHhcC
Q 013073 81 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKN-IIKFEGDHNS-----PRPQFYFDSINIFFHNVLQ 145 (450)
Q Consensus 81 akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKe-Lvi~EGgHn~-----~~peeyle~Iv~FLk~~L~ 145 (450)
++++++|+|+|+|++|.++|+++++.+.+.+++.+. .++.++||.. ..+.+++..|.+||+++-+
T Consensus 293 L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 293 LADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred hhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 578999999999999999999999999999876533 3445668964 2378999999999998864
No 88
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.71 E-value=0.0054 Score=52.53 Aligned_cols=58 Identities=10% Similarity=0.177 Sum_probs=49.4
Q ss_pred cCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 013073 84 CFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSP--RPQFYFDSINIFFHN 142 (450)
Q Consensus 84 IkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~~--~peeyle~Iv~FLk~ 142 (450)
...|+|||+++.|.++|++.++++.+.+++ .+++.++| ||... ...-..+.|.+||..
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPG-SRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCC-ceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 459999999999999999999999999997 68899988 69753 356778888889874
No 89
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.66 E-value=0.0051 Score=60.68 Aligned_cols=67 Identities=18% Similarity=0.225 Sum_probs=53.9
Q ss_pred HHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC-Cc---EEEEeCC-CCCCC-------C------hHHHHHHHHHH
Q 013073 78 IKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DK---NIIKFEG-DHNSP-------R------PQFYFDSINIF 139 (450)
Q Consensus 78 ik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg-pK---eLvi~EG-gHn~~-------~------peeyle~Iv~F 139 (450)
..-+.++++|+||+.|+.|.++|++....+-+.++. ++ ++.+|+| +|.+. . .++.++.+..|
T Consensus 157 ~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~W 236 (242)
T KOG3043|consen 157 SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISW 236 (242)
T ss_pred hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHH
Confidence 345677999999999999999999999999998886 33 6899998 58552 1 24677888999
Q ss_pred HHHhc
Q 013073 140 FHNVL 144 (450)
Q Consensus 140 Lk~~L 144 (450)
|+.++
T Consensus 237 f~~y~ 241 (242)
T KOG3043|consen 237 FKHYL 241 (242)
T ss_pred HHHhh
Confidence 99876
No 90
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.48 E-value=0.004 Score=58.41 Aligned_cols=30 Identities=20% Similarity=0.080 Sum_probs=26.0
Q ss_pred cCCCEEEEEeCCCCCCCHHHHHHHHHHhCC
Q 013073 84 CFVPVLFGHAVEDDFINPHHSDRIFEAYAG 113 (450)
Q Consensus 84 IkvPVLIIHGe~D~iVPpe~Se~LyEalkg 113 (450)
...|++|+||++|.+||++.++++++.++.
T Consensus 167 ~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 167 PTPIMSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred CCCeEEEEEcCCCceeCcchHHHHHHHHHH
Confidence 445678999999999999999999998763
No 91
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.37 E-value=0.023 Score=58.44 Aligned_cols=62 Identities=19% Similarity=0.392 Sum_probs=52.6
Q ss_pred hccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeC-CCCCC--CChHHHHHHHHHHHHHhc
Q 013073 82 KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFE-GDHNS--PRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 82 kkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~E-GgHn~--~~peeyle~Iv~FLk~~L 144 (450)
.....|+|||||.++.+||.++-.++.+.++. .++..++ +||+. ..|+++++.|.+|+.+..
T Consensus 250 ~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~-~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 250 GPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPN-VEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred cccccceeEEecCCCCCcChhHHHHHHHhccc-hheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 44789999999999999999998888887775 6788888 78965 569999999999988653
No 92
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=95.89 E-value=0.066 Score=52.32 Aligned_cols=53 Identities=19% Similarity=0.107 Sum_probs=42.6
Q ss_pred cccccHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCc----EEEEeCCCCC
Q 013073 72 ITDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDK----NIIKFEGDHN 125 (450)
Q Consensus 72 L~dlsPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpK----eLvi~EGgHn 125 (450)
+.+.++...+.++++|+|+++|-.|.... ..+.++|++++..+ +|++-+++|.
T Consensus 215 w~~~~~~~~~~~i~vP~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw~H~ 271 (272)
T PF02129_consen 215 WQERSPSERLDKIDVPVLIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGPWTHG 271 (272)
T ss_dssp HHTTBHHHHHGG--SEEEEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEESESTT
T ss_pred HHhCChHHHHhhCCCCEEEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeCCCCC
Confidence 44556677789999999999999997777 89999999998754 7888888885
No 93
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=95.84 E-value=0.014 Score=61.30 Aligned_cols=134 Identities=16% Similarity=0.244 Sum_probs=82.8
Q ss_pred HhccCCCccEEEEeC-CcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhh-hhccccccccHHHHh-----hccCC
Q 013073 14 YGAEDPSIAGMVLDS-PFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQK-KAKFDITDLNTIKVA-----KSCFV 86 (450)
Q Consensus 14 ~AAe~p~IKgLILDS-PFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikk-r~gFdL~dlsPik~a-----kkIkv 86 (450)
.|..+|+|.++|-.. -..++...+.+.++.|+-.+|--+..+...-+.++++. .+...+.-++|+.+. .+..+
T Consensus 251 TAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkqL~~IiDPlay~~try~~RLal 330 (507)
T COG4287 251 TAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQLLEIIDPLAYRNTRYQLRLAL 330 (507)
T ss_pred HHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHHHHHhhcHHHHhhhhhhhhccc
Confidence 344566666665221 12345566666666665445532222211111111111 111122334777766 67889
Q ss_pred CEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCC-CCCCChHHHHHHHHHHHHHhcCCCC
Q 013073 87 PVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGD-HNSPRPQFYFDSINIFFHNVLQPPE 148 (450)
Q Consensus 87 PVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGg-Hn~~~peeyle~Iv~FLk~~L~~~~ 148 (450)
|-.|+.|..|++.++..+..+|+.++|.|-|.+++.. |+.. ++.+.+.+.-|+.+.-..+.
T Consensus 331 pKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~-n~~i~esl~~flnrfq~~~~ 392 (507)
T COG4287 331 PKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI-NQFIKESLEPFLNRFQMYPK 392 (507)
T ss_pred cceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh-HHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999986 9863 44566667777766544333
No 94
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=95.77 E-value=0.0058 Score=63.80 Aligned_cols=85 Identities=21% Similarity=0.351 Sum_probs=60.8
Q ss_pred cccccHHHHHHHHh-ccCCCccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHHHH
Q 013073 2 LLTINIVYHSLLYG-AEDPSIAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIKV 80 (450)
Q Consensus 2 ll~~sgGATALm~A-Ae~p~IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik~ 80 (450)
|+|-|+|+....+| ..+|+|++||+|+.|.|+..++... +|.++..++..-++ ... .++..+.
T Consensus 315 lygWSIGGF~~~waAs~YPdVkavvLDAtFDDllpLAl~r-------MP~~~~giV~~aiR----nh~-----NLnnael 378 (517)
T KOG1553|consen 315 LYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLLPLALFR-------MPTFFSGIVEHAIR----NHM-----NLNNAEL 378 (517)
T ss_pred EEEeecCCchHHHHhhcCCCceEEEeecchhhhhhHHhhh-------chHHHHHHHHHHHH----Hhc-----ccchHHH
Confidence 67888777655555 5679999999999999988776644 45554443322222 222 2367788
Q ss_pred hhccCCCEEEEEeCCCCCCCHH
Q 013073 81 AKSCFVPVLFGHAVEDDFINPH 102 (450)
Q Consensus 81 akkIkvPVLIIHGe~D~iVPpe 102 (450)
+.+++.|+++|--++|+++.-.
T Consensus 379 l~ry~GPi~lIRRt~dEIitt~ 400 (517)
T KOG1553|consen 379 LARYKGPIRLIRRTQDEIITTA 400 (517)
T ss_pred HHhhcCchhHhhhhhHhhhhcc
Confidence 8999999999999999886543
No 95
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.72 E-value=0.043 Score=47.97 Aligned_cols=63 Identities=19% Similarity=0.344 Sum_probs=45.8
Q ss_pred HHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHH
Q 013073 79 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFH 141 (450)
Q Consensus 79 k~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk 141 (450)
.....+.+|+|+++|..|.++|......+.+.++...+++++++ +|.. ..+..+.+.+..|+.
T Consensus 215 ~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 215 AALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred hhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 34556789999999999988887776666666665457888876 6976 346677777777443
No 96
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.68 E-value=0.05 Score=58.94 Aligned_cols=69 Identities=19% Similarity=0.148 Sum_probs=46.8
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC--CcEEEEeCCCCCCC----------C-hHHHHH--HHHHHH
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG--DKNIIKFEGDHNSP----------R-PQFYFD--SINIFF 140 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg--pKeLvi~EGgHn~~----------~-peeyle--~Iv~FL 140 (450)
+....+.++++|+|++.|-.|.+ ...+.+.|+.+.. +++|++=+++|... . ...+.. .+..||
T Consensus 223 ~~~~~~~~i~vP~l~~~gw~D~~--~~g~~~~~~~~~~~~~~~lilGpw~H~~~~~~~~~~~~g~~~~~~~~~~~~~~wf 300 (550)
T TIGR00976 223 SLWRDLGGSDVPTLVTGGWYDNH--SRGSIRLFLAVHRGGAQRLVVGPWTHSGLGGRVGDGNYGMAALSWVDEAEQLAFF 300 (550)
T ss_pred chhhHhcCCCCCEEEeCcccCCC--CchHHHHHHHHhhcCCceEEEccCCCCCcccccCCCccCccccccchhhhhHHHH
Confidence 44556778999999999999943 3466667777654 46777667778621 0 112222 468999
Q ss_pred HHhcCC
Q 013073 141 HNVLQP 146 (450)
Q Consensus 141 k~~L~~ 146 (450)
..+|+-
T Consensus 301 D~~Lkg 306 (550)
T TIGR00976 301 DRHLKG 306 (550)
T ss_pred HHHhCC
Confidence 999974
No 97
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=95.66 E-value=0.05 Score=53.93 Aligned_cols=56 Identities=16% Similarity=0.205 Sum_probs=43.2
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCCC-CCC--CC---hHHHHHHHHHHHHH
Q 013073 85 FVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGD-HNS--PR---PQFYFDSINIFFHN 142 (450)
Q Consensus 85 kvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EGg-Hn~--~~---peeyle~Iv~FLk~ 142 (450)
-.|+||+||+.|.+.+ +++.+.+++.. +.++..++|. |.+ .. ....+..+..||.+
T Consensus 245 lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 245 LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTGPEARSALRQIAAFLRA 309 (312)
T ss_pred CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcceeccccCcHHHHHHHHHHHHHHHH
Confidence 5889999999999999 88888887754 5789999996 966 22 23446677777763
No 98
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=95.43 E-value=0.14 Score=54.54 Aligned_cols=72 Identities=17% Similarity=0.250 Sum_probs=48.9
Q ss_pred ccccHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCc-EEEEe-CCCCCC------CChHHHHHH-HHHHHHHh
Q 013073 73 TDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDK-NIIKF-EGDHNS------PRPQFYFDS-INIFFHNV 143 (450)
Q Consensus 73 ~dlsPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpK-eLvi~-EGgHn~------~~peeyle~-Iv~FLk~~ 143 (450)
+..++.+++++|++|+|+|++.+|+++|.+ +.-+-+...++. -+++. .|||.- .....|.++ +.+|+...
T Consensus 310 ~~aSs~~~v~~I~VP~L~ina~DDPv~p~~-~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 310 KKASSSNYVDKIKVPLLCINAADDPVVPEE-AIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred hhcchhhhcccccccEEEEecCCCCCCCcc-cCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 445788899999999999999999999985 322223333332 23332 678942 235577777 88999876
Q ss_pred cC
Q 013073 144 LQ 145 (450)
Q Consensus 144 L~ 145 (450)
.-
T Consensus 389 ~~ 390 (409)
T KOG1838|consen 389 IF 390 (409)
T ss_pred Hh
Confidence 53
No 99
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=95.42 E-value=0.25 Score=49.91 Aligned_cols=115 Identities=16% Similarity=0.193 Sum_probs=66.1
Q ss_pred HHHHHHhccCCCccEEEEeCCcCCHHHHHHHHHHHhhc-----cCChhhH----H-HHHHHHHHHHhhhhccccccc-cH
Q 013073 9 YHSLLYGAEDPSIAGMVLDSPFSDLVDLMMELVDTYKI-----RLPKFTV----K-FAIQYMRKAIQKKAKFDITDL-NT 77 (450)
Q Consensus 9 ATALm~AAe~p~IKgLILDSPFSdL~dl~~e~lk~~~~-----~LP~~~~----~-~~l~flr~~Ikkr~gFdL~dl-sP 77 (450)
-+|+..|+ ..++..+|+.-+..++++.+...++.-.. .+|.-+- . ...-|++ ..+...+.++ +.
T Consensus 113 RIAy~Va~-~i~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~----dc~e~~w~~l~ST 187 (294)
T PF02273_consen 113 RIAYEVAA-DINLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDLDFEGHNLGAEVFVT----DCFEHGWDDLDST 187 (294)
T ss_dssp HHHHHHTT-TS--SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEEEETTEEEEHHHHHH----HHHHTT-SSHHHH
T ss_pred HHHHHHhh-ccCcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCcccccccccchHHHHH----HHHHcCCccchhH
Confidence 34555444 55799999999999999998877543111 2221100 0 0122333 2233345554 46
Q ss_pred HHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEeCCC-CCCCC
Q 013073 78 IKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEGD-HNSPR 128 (450)
Q Consensus 78 ik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~EGg-Hn~~~ 128 (450)
+..++++.+|++.+++.+|.+|......++...+.. .++++.++|. |....
T Consensus 188 ~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~e 240 (294)
T PF02273_consen 188 INDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLGE 240 (294)
T ss_dssp HHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TTS
T ss_pred HHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhhh
Confidence 778899999999999999999999999999998887 4689999996 98744
No 100
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.21 E-value=0.15 Score=53.36 Aligned_cols=67 Identities=19% Similarity=0.248 Sum_probs=51.0
Q ss_pred cHHHHhhccC--CCEEEEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEeCC-CCC-C-CChHHHHHHHHHHHHHh
Q 013073 76 NTIKVAKSCF--VPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEG-DHN-S-PRPQFYFDSINIFFHNV 143 (450)
Q Consensus 76 sPik~akkIk--vPVLIIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~EG-gHn-~-~~peeyle~Iv~FLk~~ 143 (450)
..++++...+ ||++||||..| .+....+.++...+.. ..+.++++| ||+ + ..|+.+.+.|..+++..
T Consensus 292 Pm~~r~~~l~~~~pv~fiyG~~d-WmD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 292 PMIQRLRELKKDVPVTFIYGDRD-WMDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred hHHHHHHhhccCCCEEEEecCcc-cccchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 3466777766 99999999987 5577888888876543 578999988 565 4 45888999999988753
No 101
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=95.08 E-value=0.048 Score=60.78 Aligned_cols=119 Identities=16% Similarity=0.197 Sum_probs=79.1
Q ss_pred HHHHHHHHhccCCC-ccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHHHHhhcc-
Q 013073 7 IVYHSLLYGAEDPS-IAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIKVAKSC- 84 (450)
Q Consensus 7 gGATALm~AAe~p~-IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik~akkI- 84 (450)
||-.+|+..+++|+ .++.|+-+|.++|.-.=.....+| +++|..-. .++ ..-+...++.++
T Consensus 737 GGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTERY-Mg~P~~nE--------------~gY--~agSV~~~Veklp 799 (867)
T KOG2281|consen 737 GGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTERY-MGYPDNNE--------------HGY--GAGSVAGHVEKLP 799 (867)
T ss_pred ccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhhh-cCCCccch--------------hcc--cchhHHHHHhhCC
Confidence 56678888889998 678888888888753221222222 55553111 011 011333444443
Q ss_pred --CCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCCC-CCC---CChHHHHHHHHHHHHH
Q 013073 85 --FVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGD-HNS---PRPQFYFDSINIFFHN 142 (450)
Q Consensus 85 --kvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EGg-Hn~---~~peeyle~Iv~FLk~ 142 (450)
.--+|++||--|+-|.+.|.-+|..++.. +-+|.+|+.. |.. .....|..++..||++
T Consensus 800 depnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 800 DEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred CCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 34589999999999999999999988643 5689999985 854 2345777899999986
No 102
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=94.76 E-value=0.027 Score=62.19 Aligned_cols=116 Identities=15% Similarity=0.249 Sum_probs=74.4
Q ss_pred ccCCC-ccEEEEeCCcCCHHHHHHHHHH-Hh--hccCChhhHHHHHHHHHHHHhhhhccccccccHHHHhhc--cCCCEE
Q 013073 16 AEDPS-IAGMVLDSPFSDLVDLMMELVD-TY--KIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIKVAKS--CFVPVL 89 (450)
Q Consensus 16 Ae~p~-IKgLILDSPFSdL~dl~~e~lk-~~--~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik~akk--IkvPVL 89 (450)
-+.|. +.++|++.|..||-..-..... .| .++-|..+..+. .+..++|++.++. .-.|+|
T Consensus 519 TQrPelfgA~v~evPllDMlRYh~l~aG~sW~~EYG~Pd~P~d~~--------------~l~~YSPy~nl~~g~kYP~~L 584 (648)
T COG1505 519 TQRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAEYGNPDDPEDRA--------------FLLAYSPYHNLKPGQKYPPTL 584 (648)
T ss_pred ccChhhhCceeeccchhhhhhhcccccchhhHhhcCCCCCHHHHH--------------HHHhcCchhcCCccccCCCeE
Confidence 35665 8899999998876432111100 01 123343333221 1344588888765 458999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEe---CCCCCCCC----hHHHHHHHHHHHHHhcC
Q 013073 90 FGHAVEDDFINPHHSDRIFEAYAG-DKNIIKF---EGDHNSPR----PQFYFDSINIFFHNVLQ 145 (450)
Q Consensus 90 IIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~---EGgHn~~~----peeyle~Iv~FLk~~L~ 145 (450)
|--+..|+.|.|.|+++++.+++. ....+++ +|||.-.. .......+..||.+.|.
T Consensus 585 ITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 585 ITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTLG 648 (648)
T ss_pred EEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999875 2223333 56896522 24566677889988763
No 103
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=94.68 E-value=0.13 Score=49.93 Aligned_cols=60 Identities=22% Similarity=0.199 Sum_probs=45.9
Q ss_pred HhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCCCC-hHHHHHHHHHHHH
Q 013073 80 VAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSPR-PQFYFDSINIFFH 141 (450)
Q Consensus 80 ~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~~~-peeyle~Iv~FLk 141 (450)
.+.-+.+|.|||||+.|++|.+....+.++.. +-.++.++| +|.+.. -..+.+.|..||.
T Consensus 144 ~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~--~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 144 FLAPCPSPGLVIQGDADDVVDLVAVLKWQESI--KITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred hccCCCCCceeEecChhhhhcHHHHHHhhcCC--CCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 34568899999999999999998887776662 234566666 598865 4678889999985
No 104
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=94.66 E-value=0.15 Score=53.01 Aligned_cols=138 Identities=19% Similarity=0.172 Sum_probs=75.3
Q ss_pred cccHHHHHHHHhcc----CCCccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhh-ccccccccHH
Q 013073 4 TINIVYHSLLYGAE----DPSIAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKA-KFDITDLNTI 78 (450)
Q Consensus 4 ~~sgGATALm~AAe----~p~IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~-gFdL~dlsPi 78 (450)
|||+|..--+.+++ .+.|+|.|+..||....+....-.+......+.........+.+..+.... +.+--.++|.
T Consensus 176 GGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~ 255 (336)
T KOG1515|consen 176 GGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPV 255 (336)
T ss_pred cHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCcccccc
Confidence 56665544444442 357999999999887665443322211011122222221222221122212 2222223444
Q ss_pred H------HhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCCC-CCC----C---ChHHHHHHHHHHHH
Q 013073 79 K------VAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGD-HNS----P---RPQFYFDSINIFFH 141 (450)
Q Consensus 79 k------~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EGg-Hn~----~---~peeyle~Iv~FLk 141 (450)
. .....-.|+|++-++.|-+. .++..+.++++. ..+++.++++ |.+ . ...+.++.|..|++
T Consensus 256 ~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~ 333 (336)
T KOG1515|consen 256 GNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIK 333 (336)
T ss_pred ccccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHh
Confidence 3 11223456999999999887 577777777754 3456667776 854 1 24588899999998
Q ss_pred Hh
Q 013073 142 NV 143 (450)
Q Consensus 142 ~~ 143 (450)
..
T Consensus 334 ~~ 335 (336)
T KOG1515|consen 334 SN 335 (336)
T ss_pred hc
Confidence 64
No 105
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=94.42 E-value=0.23 Score=46.42 Aligned_cols=41 Identities=15% Similarity=0.272 Sum_probs=33.0
Q ss_pred cCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC
Q 013073 84 CFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS 126 (450)
Q Consensus 84 IkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~ 126 (450)
..+|.++|.+++|++||+..+++|.+.++. +++.+++ ||..
T Consensus 113 l~~~~~viaS~nDp~vp~~~a~~~A~~l~a--~~~~~~~~GHf~ 154 (171)
T PF06821_consen 113 LPFPSIVIASDNDPYVPFERAQRLAQRLGA--ELIILGGGGHFN 154 (171)
T ss_dssp HHCCEEEEEETTBSSS-HHHHHHHHHHHT---EEEEETS-TTSS
T ss_pred cCCCeEEEEcCCCCccCHHHHHHHHHHcCC--CeEECCCCCCcc
Confidence 445669999999999999999999999974 6888866 6954
No 106
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=94.01 E-value=0.11 Score=55.47 Aligned_cols=68 Identities=15% Similarity=0.121 Sum_probs=54.2
Q ss_pred hhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCCC-----CC--hHHHHH----HHHHHHHHhcCCCC
Q 013073 81 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNS-----PR--PQFYFD----SINIFFHNVLQPPE 148 (450)
Q Consensus 81 akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn~-----~~--peeyle----~Iv~FLk~~L~~~~ 148 (450)
+.+++||++++.|++|.++|+.........+++.++++..++||.. +. ..+|+. .+.+||...-..+.
T Consensus 326 L~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~~~~g 404 (445)
T COG3243 326 LGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLSRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAKEHPG 404 (445)
T ss_pred hhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEecCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhccCCC
Confidence 4679999999999999999999999999999998899999999932 11 335555 78888876644333
No 107
>PRK04940 hypothetical protein; Provisional
Probab=93.81 E-value=0.5 Score=45.17 Aligned_cols=51 Identities=16% Similarity=0.189 Sum_probs=44.0
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCC-CCCCChHHHHHHHHHHHH
Q 013073 88 VLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGD-HNSPRPQFYFDSINIFFH 141 (450)
Q Consensus 88 VLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGg-Hn~~~peeyle~Iv~FLk 141 (450)
.+++..+.|++..+.++.+.|..+- ++++.+|| |.+..-++++..|..|++
T Consensus 127 ~~vllq~gDEvLDyr~a~~~y~~~y---~~~v~~GGdH~f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTAEELHPYY---EIVWDEEQTHKFKNISPHLQRIKAFKT 178 (180)
T ss_pred EEEEEeCCCcccCHHHHHHHhccCc---eEEEECCCCCCCCCHHHHHHHHHHHHh
Confidence 4999999999999999998886652 37777887 999999999999999985
No 108
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=93.76 E-value=0.18 Score=50.76 Aligned_cols=62 Identities=18% Similarity=0.358 Sum_probs=46.8
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhC--C--CcEEEEeCC-CCCCCChHHHHHHHHHHHHHhcCCC
Q 013073 85 FVPVLFGHAVEDDFINPHHSDRIFEAYA--G--DKNIIKFEG-DHNSPRPQFYFDSINIFFHNVLQPP 147 (450)
Q Consensus 85 kvPVLIIHGe~D~iVPpe~Se~LyEalk--g--pKeLvi~EG-gHn~~~peeyle~Iv~FLk~~L~~~ 147 (450)
++|+||.||..|.+||+...+++++.+- + +.+++.+++ +|.... ..-......||..++.-.
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~-~~~~~~a~~Wl~~rf~G~ 285 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAA-FASAPDALAWLDDRFAGK 285 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhh-hcCcHHHHHHHHHHHCCC
Confidence 6999999999999999999999998752 3 456777776 487532 223356668999988533
No 109
>PLN00021 chlorophyllase
Probab=93.47 E-value=0.16 Score=51.82 Aligned_cols=63 Identities=13% Similarity=0.087 Sum_probs=45.3
Q ss_pred cCCCEEEEEeCCCC-----C----CCHHHH-HHHHHHhCCCcEEEEeCC-CCCCC---C---------------------
Q 013073 84 CFVPVLFGHAVEDD-----F----INPHHS-DRIFEAYAGDKNIIKFEG-DHNSP---R--------------------- 128 (450)
Q Consensus 84 IkvPVLIIHGe~D~-----i----VPpe~S-e~LyEalkgpKeLvi~EG-gHn~~---~--------------------- 128 (450)
+.+|+|||++..|. + .|.... ++||+.++.++.+.+.++ +|... .
T Consensus 188 ~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~ 267 (313)
T PLN00021 188 LDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKP 267 (313)
T ss_pred CCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcceeecCCCccccccccccccCCCCchHH
Confidence 78999999999763 3 334444 889999999888777765 58531 0
Q ss_pred -hHHHHHHHHHHHHHhcCC
Q 013073 129 -PQFYFDSINIFFHNVLQP 146 (450)
Q Consensus 129 -peeyle~Iv~FLk~~L~~ 146 (450)
++.+...+..||+.+|+.
T Consensus 268 ~r~~~~g~~~aFl~~~l~~ 286 (313)
T PLN00021 268 MRRFVGGAVVAFLKAYLEG 286 (313)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 234556888899998853
No 110
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=93.43 E-value=0.041 Score=56.39 Aligned_cols=70 Identities=16% Similarity=0.311 Sum_probs=15.2
Q ss_pred cccccHHHHhhccCCCEEEEEeCCCCCCCHH-HHHHHHHHhCC--CcE-----EEEeCCC-CCCCC------hHHHHHHH
Q 013073 72 ITDLNTIKVAKSCFVPVLFGHAVEDDFINPH-HSDRIFEAYAG--DKN-----IIKFEGD-HNSPR------PQFYFDSI 136 (450)
Q Consensus 72 L~dlsPik~akkIkvPVLIIHGe~D~iVPpe-~Se~LyEalkg--pKe-----Lvi~EGg-Hn~~~------peeyle~I 136 (450)
+.+-...+..+.+.+|+|++.+.+|++||.. .-++|.++++. +.. --+++|+ |+... .+.+.++|
T Consensus 219 L~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV 298 (303)
T PF08538_consen 219 LSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERV 298 (303)
T ss_dssp HTT-HHHHTGGG--S-EEEEEE--TT------------------------------------------------------
T ss_pred CCHHHHHHHhccCCCceEEEecCCCceecccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4443445567889999999999999999974 44667777664 222 3377887 98643 23577888
Q ss_pred HHHHH
Q 013073 137 NIFFH 141 (450)
Q Consensus 137 v~FLk 141 (450)
..||+
T Consensus 299 ~~fl~ 303 (303)
T PF08538_consen 299 VKFLK 303 (303)
T ss_dssp -----
T ss_pred cccCC
Confidence 88875
No 111
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.27 E-value=0.2 Score=50.01 Aligned_cols=59 Identities=14% Similarity=0.094 Sum_probs=50.9
Q ss_pred ccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCCC--hHHHHHHHHHHHH
Q 013073 83 SCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSPR--PQFYFDSINIFFH 141 (450)
Q Consensus 83 kIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn~~~--peeyle~Iv~FLk 141 (450)
.+.||+..+.|++|..|..++....-+..++.-++..|+|||.+.. ..++...|...+.
T Consensus 174 pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdGgHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 174 PLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDGGHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred CcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecCcceehhhhHHHHHHHHHHHhh
Confidence 4889999999999999999999999999998889999999998744 4567676666664
No 112
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=93.00 E-value=0.26 Score=51.04 Aligned_cols=62 Identities=19% Similarity=0.199 Sum_probs=46.5
Q ss_pred hccCCCEEEEEeCCCCCCCHHHHHHHHHH-hCCCcEEEEeCC-CCCC--CChHHHHHHHHHHHHHh
Q 013073 82 KSCFVPVLFGHAVEDDFINPHHSDRIFEA-YAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHNV 143 (450)
Q Consensus 82 kkIkvPVLIIHGe~D~iVPpe~Se~LyEa-lkgpKeLvi~EG-gHn~--~~peeyle~Iv~FLk~~ 143 (450)
.++++|++||.|..|.+-++..-.++|.+ ++...+.++++| ||.. ..++++.+.|..||++.
T Consensus 255 ~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 255 AKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 46899999999999999998733334433 444445666766 5864 56999999999999875
No 113
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=92.71 E-value=0.38 Score=46.11 Aligned_cols=57 Identities=12% Similarity=0.248 Sum_probs=42.2
Q ss_pred cCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEe-CCCCCCC-----ChHHHHHHHHHHHHH
Q 013073 84 CFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKF-EGDHNSP-----RPQFYFDSINIFFHN 142 (450)
Q Consensus 84 IkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~-EGgHn~~-----~peeyle~Iv~FLk~ 142 (450)
..-|.++++..+|+++++++++.+.+++++ .|+.. +|||... .-.+....+..|+.+
T Consensus 116 lpfps~vvaSrnDp~~~~~~a~~~a~~wgs--~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 116 LPFPSVVVASRNDPYVSYEHAEDLANAWGS--ALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred CCCceeEEEecCCCCCCHHHHHHHHHhccH--hheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 556999999999999999999999999986 46665 5678431 134555555556544
No 114
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.46 E-value=0.45 Score=53.10 Aligned_cols=71 Identities=18% Similarity=0.230 Sum_probs=55.2
Q ss_pred HHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCC-CCCCC-----------h----HHHHHHHHHHHHH
Q 013073 79 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGD-HNSPR-----------P----QFYFDSINIFFHN 142 (450)
Q Consensus 79 k~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGg-Hn~~~-----------p----eeyle~Iv~FLk~ 142 (450)
+.+-.++.|+|||.|.+|..++++..+++.++++...++++++|+ |...- . ....+.|.+|+..
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~efvt~ 377 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVTI 377 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHHHHHH
Confidence 345568999999999999999999999999999998889999985 97611 1 1345666667666
Q ss_pred hcCCCCC
Q 013073 143 VLQPPED 149 (450)
Q Consensus 143 ~L~~~~d 149 (450)
.+...++
T Consensus 378 ~l~c~eg 384 (784)
T KOG3253|consen 378 ALNCTEG 384 (784)
T ss_pred hhcCCCC
Confidence 6665554
No 115
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=90.30 E-value=0.41 Score=46.75 Aligned_cols=56 Identities=14% Similarity=0.392 Sum_probs=43.6
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCC-CCCCCChHHHHHHHHHHHHH
Q 013073 85 FVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEG-DHNSPRPQFYFDSINIFFHN 142 (450)
Q Consensus 85 kvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EG-gHn~~~peeyle~Iv~FLk~ 142 (450)
..|+|..||+.|++||..-++.-.+.++. .+++..|+| +|.. -+ +=++.+..||++
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~-~~-~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHST-SP-QELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccc-cH-HHHHHHHHHHHH
Confidence 68999999999999999888887777653 477888898 5863 23 345667778876
No 116
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=90.27 E-value=0.45 Score=51.34 Aligned_cols=66 Identities=15% Similarity=0.213 Sum_probs=51.6
Q ss_pred HHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC----C-------cEEEEeCC-CCCC----CChHHHHHHHHHHHH
Q 013073 78 IKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG----D-------KNIIKFEG-DHNS----PRPQFYFDSINIFFH 141 (450)
Q Consensus 78 ik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg----p-------KeLvi~EG-gHn~----~~peeyle~Iv~FLk 141 (450)
+...++--..+|+.||..|.+||+..+.++|++... . -+|+.++| +|+. ..+.+.+..|++|.+
T Consensus 346 LsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE 425 (474)
T PF07519_consen 346 LSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVE 425 (474)
T ss_pred HHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHh
Confidence 334455568899999999999999999999987532 1 36777899 5976 235689999999998
Q ss_pred Hh
Q 013073 142 NV 143 (450)
Q Consensus 142 ~~ 143 (450)
+-
T Consensus 426 ~G 427 (474)
T PF07519_consen 426 NG 427 (474)
T ss_pred CC
Confidence 54
No 117
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=88.60 E-value=3 Score=42.92 Aligned_cols=112 Identities=18% Similarity=0.192 Sum_probs=64.5
Q ss_pred HHHHHHHHhccCCCccEEEEeCCcC-----CHHHHHHHHHHHh-hccCChhhHHHHHHHHHHHHh--------------h
Q 013073 7 IVYHSLLYGAEDPSIAGMVLDSPFS-----DLVDLMMELVDTY-KIRLPKFTVKFAIQYMRKAIQ--------------K 66 (450)
Q Consensus 7 gGATALm~AAe~p~IKgLILDSPFS-----dL~dl~~e~lk~~-~~~LP~~~~~~~l~flr~~Ik--------------k 66 (450)
|+-.||+.|...| ..|+|+..|.. .++.+++-..-.| ...+|.++.+.+.+++-+.+. .
T Consensus 114 Gcenal~la~~~~-~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~ 192 (297)
T PF06342_consen 114 GCENALQLAVTHP-LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKVSDGEEAINAMRS 192 (297)
T ss_pred chHHHHHHHhcCc-cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeeecChHHHHHHHHH
Confidence 4567888888776 56899888643 2333222111011 112555555443333222221 1
Q ss_pred hhccccc-cccHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEE
Q 013073 67 KAKFDIT-DLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIK 119 (450)
Q Consensus 67 r~gFdL~-dlsPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi 119 (450)
...+++. ....++.+.+-++|+||+.|.+|.+|--+.+.++.+.+.+-+.+.+
T Consensus 193 m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~ 246 (297)
T PF06342_consen 193 MQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNI 246 (297)
T ss_pred HHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceee
Confidence 1222221 1234566677789999999999999999999998887766444444
No 118
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=88.51 E-value=1.7 Score=48.85 Aligned_cols=109 Identities=15% Similarity=0.195 Sum_probs=69.5
Q ss_pred cccccHHHHHHHHhcc-CCC-ccEEEEeCCcCCHHHHHHHH-H-------HHhhccCChhhHHHHHHHHHHHHhhhhccc
Q 013073 2 LLTINIVYHSLLYGAE-DPS-IAGMVLDSPFSDLVDLMMEL-V-------DTYKIRLPKFTVKFAIQYMRKAIQKKAKFD 71 (450)
Q Consensus 2 ll~~sgGATALm~AAe-~p~-IKgLILDSPFSdL~dl~~e~-l-------k~~~~~LP~~~~~~~l~flr~~Ikkr~gFd 71 (450)
+.|||.|++-+-+++. .|+ .+|+|+..||.|....+..- + ..| +-|.- .-... -
T Consensus 531 a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EW--GNP~d--~e~y~------------y 594 (682)
T COG1770 531 AIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEW--GNPLD--PEYYD------------Y 594 (682)
T ss_pred EeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhhh--CCcCC--HHHHH------------H
Confidence 4678888776655553 354 99999999999987665422 1 111 11110 01111 2
Q ss_pred cccccHHHHhhc-cCCCEEEEEeCCCCCCCHHHHHHHHHHhCC---C--cEEEEe--CCCCCC
Q 013073 72 ITDLNTIKVAKS-CFVPVLFGHAVEDDFINPHHSDRIFEAYAG---D--KNIIKF--EGDHNS 126 (450)
Q Consensus 72 L~dlsPik~akk-IkvPVLIIHGe~D~iVPpe~Se~LyEalkg---p--KeLvi~--EGgHn~ 126 (450)
++.++|++.+.. --.|+|++.|..|..|.+.+..+...+++. . .-|... +.||.-
T Consensus 595 ikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG 657 (682)
T COG1770 595 IKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGG 657 (682)
T ss_pred HhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCC
Confidence 345688888876 458899999999999999888777777654 2 233333 447954
No 119
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=88.47 E-value=1.5 Score=46.18 Aligned_cols=67 Identities=15% Similarity=0.123 Sum_probs=54.6
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC--CCC-C-CChHHHHHHHHHHHHH
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG--DHN-S-PRPQFYFDSINIFFHN 142 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG--gHn-~-~~peeyle~Iv~FLk~ 142 (450)
+..+.++++++|+|++-=+.|.+.|+++.+++.+.++..+.++.++- ||. + .....+...|..||..
T Consensus 297 ~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 297 DLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred cHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 34556788999999999999999999999999999998665777754 684 2 3456777899999864
No 120
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=87.70 E-value=4.1 Score=42.92 Aligned_cols=103 Identities=17% Similarity=0.246 Sum_probs=61.5
Q ss_pred cc-EEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHHHHhhccCCCEEEEEeCC----
Q 013073 21 IA-GMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIKVAKSCFVPVLFGHAVE---- 95 (450)
Q Consensus 21 IK-gLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik~akkIkvPVLIIHGe~---- 95 (450)
|+ .+|-|.+|.++...+....... ..+ +++ ..++++ +..+.-++..||-+|+|+.+
T Consensus 244 i~~~~ikDRsfssl~~vas~~~~~~--------~~~---l~~-----l~gWni---dS~K~s~~l~cpeIii~~~d~~~~ 304 (365)
T PF05677_consen 244 IRWFLIKDRSFSSLAAVASQFFGPI--------GKL---LIK-----LLGWNI---DSAKNSEKLQCPEIIIYGVDSRSQ 304 (365)
T ss_pred eeEEEEecCCcchHHHHHHHHHHHH--------HHH---HHH-----HhccCC---CchhhhccCCCCeEEEeccccchh
Confidence 66 4667899999999887664321 122 111 234443 56777888999999999984
Q ss_pred ---CCCCCHHHHHHHHHHhCC---------CcEEEEeCC-CCCCCChHHHHHHHHHHHHHhc
Q 013073 96 ---DDFINPHHSDRIFEAYAG---------DKNIIKFEG-DHNSPRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 96 ---D~iVPpe~Se~LyEalkg---------pKeLvi~EG-gHn~~~peeyle~Iv~FLk~~L 144 (450)
|.+.+++.. |+..+.. .|..+.-.. .|+..-.....+.|..-|.+++
T Consensus 305 ~i~Dgl~~~~~~--lA~~~l~~~~~~~~~~~Ki~i~~~~l~H~~~L~~~~~~~la~~I~~~~ 364 (365)
T PF05677_consen 305 LIGDGLFEPENC--LAAAFLDPPTAEKLSGKKIPIGERLLLHNEPLDDETIQALAEHILDHF 364 (365)
T ss_pred hcccccCCcchh--hHHHhcCCcccccccccceecccccccccccCChHHHHHHHHHHHhhc
Confidence 445554433 2333222 222222222 3877667777777777776654
No 121
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=87.38 E-value=0.81 Score=43.29 Aligned_cols=113 Identities=10% Similarity=0.071 Sum_probs=61.5
Q ss_pred cccccHHHHHHHH-hccCCC-ccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHHH
Q 013073 2 LLTINIVYHSLLY-GAEDPS-IAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIK 79 (450)
Q Consensus 2 ll~~sgGATALm~-AAe~p~-IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik 79 (450)
|.|.|+|+...++ +.++|+ +.++++.||+.+....+.... ....+ ...++..
T Consensus 119 i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~w~~~-----~~~~~---------------------~~~~~~~ 172 (251)
T PF00756_consen 119 IAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSLWGPS-----DDEAW---------------------KENDPFD 172 (251)
T ss_dssp EEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCHHHHS-----TCGHH---------------------GGCHHHH
T ss_pred EeccCCCcHHHHHHHHhCccccccccccCccccccccccCcC-----CcHHh---------------------hhccHHH
Confidence 4576776665555 557885 999999999866541111000 00000 0001111
Q ss_pred -----HhhccCCCEEEEEeCCCCCCC----------HHHHHHHHHHhCC---CcEEEEeCCCCCCCChHHHHHHHHHHH
Q 013073 80 -----VAKSCFVPVLFGHAVEDDFIN----------PHHSDRIFEAYAG---DKNIIKFEGDHNSPRPQFYFDSINIFF 140 (450)
Q Consensus 80 -----~akkIkvPVLIIHGe~D~iVP----------pe~Se~LyEalkg---pKeLvi~EGgHn~~~peeyle~Iv~FL 140 (450)
..+.-.++++|..|..|.... ....+.+.+.+.. ...+..++|+|+.......+.....||
T Consensus 173 ~~~~~~~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~G~H~~~~W~~~l~~~L~~~ 251 (251)
T PF00756_consen 173 LIKALSQKKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKGIPHTYHVFPGGHDWAYWRRRLPDALPWM 251 (251)
T ss_dssp HHHHHHHTTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEECTTESEEEHSESSHHHHHHHHHHHHHHH
T ss_pred HhhhhhcccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcCCCceEEEecCccchhhHHHHHHHHHhhC
Confidence 123356789999999999443 1233334434432 456778888898754444444444443
No 122
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=87.01 E-value=2 Score=41.24 Aligned_cols=63 Identities=11% Similarity=0.144 Sum_probs=43.1
Q ss_pred HHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCC-CCCCC--------h----HHHHHHHHHHHHH
Q 013073 78 IKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGD-HNSPR--------P----QFYFDSINIFFHN 142 (450)
Q Consensus 78 ik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGg-Hn~~~--------p----eeyle~Iv~FLk~ 142 (450)
.+++..+++|+||.||+.|.+-..++.-. -.+..+.++++++++ |...- . ...-++|..|+.+
T Consensus 135 t~HL~gl~tPtli~qGtrD~fGtr~~Va~--y~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 135 TEHLTGLKTPTLITQGTRDEFGTRDEVAG--YALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred hhhccCCCCCeEEeecccccccCHHHHHh--hhcCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 34677799999999999999988877622 123346788888776 86521 1 2344677777654
No 123
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=86.20 E-value=2.6 Score=44.67 Aligned_cols=42 Identities=7% Similarity=0.192 Sum_probs=31.9
Q ss_pred CCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCCCCCCCC
Q 013073 86 VPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGDHNSPR 128 (450)
Q Consensus 86 vPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EGgHn~~~ 128 (450)
..++|-+|..|..+ +...++|++.+.. +..+.+++|||+...
T Consensus 350 lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~GGHd~~~ 394 (411)
T PRK10439 350 LRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDGGHDALC 394 (411)
T ss_pred ceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCCCcCHHH
Confidence 45888899988654 5677889888764 467888899998744
No 124
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=84.61 E-value=1.4 Score=46.13 Aligned_cols=55 Identities=20% Similarity=0.297 Sum_probs=43.9
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCCC---CChHHHHHHHHHHH
Q 013073 85 FVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNS---PRPQFYFDSINIFF 140 (450)
Q Consensus 85 kvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn~---~~peeyle~Iv~FL 140 (450)
.-.+.||.+++|.+||.+....|.+.+++ +++.+++|||.. .+...+.+.|.+=|
T Consensus 289 p~~ii~V~A~~DaYVPr~~v~~Lq~~WPG-sEvR~l~gGHVsA~L~~q~~fR~AI~Daf 346 (348)
T PF09752_consen 289 PSAIIFVAAKNDAYVPRHGVLSLQEIWPG-SEVRYLPGGHVSAYLLHQEAFRQAIYDAF 346 (348)
T ss_pred CCcEEEEEecCceEechhhcchHHHhCCC-CeEEEecCCcEEEeeechHHHHHHHHHHh
Confidence 34579999999999999999999999986 578889999975 34556666666544
No 125
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=79.71 E-value=25 Score=36.05 Aligned_cols=57 Identities=12% Similarity=0.146 Sum_probs=39.6
Q ss_pred ccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCC-cEEEEeCC-C-CC-CCChHHHHHHHHHHHH
Q 013073 83 SCFVPVLFGHAVEDDFINPHHSDRIFEAYAGD-KNIIKFEG-D-HN-SPRPQFYFDSINIFFH 141 (450)
Q Consensus 83 kIkvPVLIIHGe~D~iVPpe~Se~LyEalkgp-KeLvi~EG-g-Hn-~~~peeyle~Iv~FLk 141 (450)
...||+|+|-|..-.. .+.+.+++.++... ..++.+++ | =. ...|..+.+.+.=||+
T Consensus 217 ~~~c~vLlvvG~~Sp~--~~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 217 SLGCPVLLVVGDNSPH--VDDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp TCCS-EEEEEETTSTT--HHHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHH
T ss_pred CCCCCeEEEEecCCcc--hhhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHc
Confidence 3579999999988755 35778898888754 45777765 3 22 2568899999998886
No 126
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.84 E-value=4.1 Score=41.93 Aligned_cols=63 Identities=21% Similarity=0.300 Sum_probs=48.9
Q ss_pred HhhccCCC-----EEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCC---ChHHHHHHHHHHHHHh
Q 013073 80 VAKSCFVP-----VLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSP---RPQFYFDSINIFFHNV 143 (450)
Q Consensus 80 ~akkIkvP-----VLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn~~---~peeyle~Iv~FLk~~ 143 (450)
.+.++.+| +.++.+++|.+||-+....|.+.+++ +++.+.+|||... ..+.+.++|.+-|.+.
T Consensus 296 ~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WPg-~eVr~~egGHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 296 HVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPG-CEVRYLEGGHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred hhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCCC-CEEEEeecCceeeeehhchHHHHHHHHHHHhh
Confidence 44556665 57889999999999888999899987 4777888999763 2567778888877754
No 127
>COG4099 Predicted peptidase [General function prediction only]
Probab=77.64 E-value=2.3 Score=44.33 Aligned_cols=30 Identities=20% Similarity=0.293 Sum_probs=27.7
Q ss_pred cCCCEEEEEeCCCCCCCHHHHHHHHHHhCC
Q 013073 84 CFVPVLFGHAVEDDFINPHHSDRIFEAYAG 113 (450)
Q Consensus 84 IkvPVLIIHGe~D~iVPpe~Se~LyEalkg 113 (450)
-+.|+.|+|+.+|+++|...++-+|+.+++
T Consensus 314 k~~piWvfhs~dDkv~Pv~nSrv~y~~lk~ 343 (387)
T COG4099 314 KKAPIWVFHSSDDKVIPVSNSRVLYERLKA 343 (387)
T ss_pred ccCceEEEEecCCCccccCcceeehHHHHh
Confidence 357999999999999999999999999876
No 128
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=76.39 E-value=16 Score=38.46 Aligned_cols=65 Identities=17% Similarity=0.196 Sum_probs=33.2
Q ss_pred hccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC--CcEEEEeCCC-CCC------CCh---------------H----HHH
Q 013073 82 KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG--DKNIIKFEGD-HNS------PRP---------------Q----FYF 133 (450)
Q Consensus 82 kkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg--pKeLvi~EGg-Hn~------~~p---------------e----eyl 133 (450)
..++.|+|+|+.+. +--...-..+.+.... ...++.+.|. |.. ..| . -..
T Consensus 271 ~~i~~P~L~InSe~--f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~ 348 (379)
T PF03403_consen 271 SKIPQPLLFINSES--FQWWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINN 348 (379)
T ss_dssp GG--S-EEEEEETT--T--HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHH
T ss_pred cCCCCCEEEEECcc--cCChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHH
Confidence 35788999999885 4333333333332222 4567788885 832 111 1 244
Q ss_pred HHHHHHHHHhcCCCC
Q 013073 134 DSINIFFHNVLQPPE 148 (450)
Q Consensus 134 e~Iv~FLk~~L~~~~ 148 (450)
+.+.+||+++|+...
T Consensus 349 ~~~l~FL~~~L~~~~ 363 (379)
T PF03403_consen 349 RASLAFLRRHLGLHK 363 (379)
T ss_dssp HHHHHHHHHHHT--S
T ss_pred HHHHHHHHHhcCCcc
Confidence 678889999988655
No 129
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=75.37 E-value=3.8 Score=41.01 Aligned_cols=57 Identities=16% Similarity=0.010 Sum_probs=44.1
Q ss_pred cCCCEEEEEeC------CCCCCCHHHHHHHHHHhCC-Cc--EEEEeCC--C-CCC-CChHHHHHHHHHHH
Q 013073 84 CFVPVLFGHAV------EDDFINPHHSDRIFEAYAG-DK--NIIKFEG--D-HNS-PRPQFYFDSINIFF 140 (450)
Q Consensus 84 IkvPVLIIHGe------~D~iVPpe~Se~LyEalkg-pK--eLvi~EG--g-Hn~-~~peeyle~Iv~FL 140 (450)
-.+.+|-|-|. .|-+||...++.|.-.++. .+ +-+++.| + |.. .+..++.+.|..||
T Consensus 183 ~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~V~~~I~~FL 252 (255)
T PF06028_consen 183 KNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQVDKLIIQFL 252 (255)
T ss_dssp TT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCHHHHHHHHHHH
T ss_pred CCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCHHHHHHHHHHh
Confidence 35789999999 9999999999999988876 23 3444555 3 876 34679999999998
No 130
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=74.66 E-value=1.6 Score=46.42 Aligned_cols=106 Identities=12% Similarity=0.141 Sum_probs=49.7
Q ss_pred ccccHHHHH-HHHhccCCCccEEEEeCCcCCHHHHHHHHH--HHh-hccCChhhHHHHHHHHHHHHhhhhccccccccHH
Q 013073 3 LTINIVYHS-LLYGAEDPSIAGMVLDSPFSDLVDLMMELV--DTY-KIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTI 78 (450)
Q Consensus 3 l~~sgGATA-Lm~AAe~p~IKgLILDSPFSdL~dl~~e~l--k~~-~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPi 78 (450)
+|.|||+.- ++.|+.+++|++.|+.+-+..+.+....+. ... ....|..+.. ++ . + .++.++.-
T Consensus 231 ~GfSmGg~~a~~LaALDdRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~----~i----P---g-l~r~~D~P 298 (390)
T PF12715_consen 231 MGFSMGGYRAWWLAALDDRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICN----YI----P---G-LWRYFDFP 298 (390)
T ss_dssp EEEGGGHHHHHHHHHH-TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG----------T---T-CCCC--HH
T ss_pred EeecccHHHHHHHHHcchhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhh----hC----c---c-HHhhCccH
Confidence 577877765 455678999999998877666655332211 000 0011111100 11 0 0 12222333
Q ss_pred HHhhc-cCCCEEEEEeCCCCCCCHHHHHHHHHHhCCC--cEEEEeCC
Q 013073 79 KVAKS-CFVPVLFGHAVEDDFINPHHSDRIFEAYAGD--KNIIKFEG 122 (450)
Q Consensus 79 k~akk-IkvPVLIIHGe~D~iVPpe~Se~LyEalkgp--KeLvi~EG 122 (450)
+.+.- ...|+||+.|..|+++|. .++-|+..+.+ -+++.|++
T Consensus 299 dIasliAPRPll~~nG~~Dklf~i--V~~AY~~~~~p~n~~~~~~p~ 343 (390)
T PF12715_consen 299 DIASLIAPRPLLFENGGKDKLFPI--VRRAYAIMGAPDNFQIHHYPK 343 (390)
T ss_dssp HHHHTTTTS-EEESS-B-HHHHHH--HHHHHHHTT-GGGEEE---GG
T ss_pred HHHHHhCCCcchhhcCCcccccHH--HHHHHHhcCCCcceEEeeccc
Confidence 33443 689999999999999876 77888887753 46666766
No 131
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=71.75 E-value=5.5 Score=38.93 Aligned_cols=58 Identities=17% Similarity=0.206 Sum_probs=46.2
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhCC-C---cEEEEeCC-CCCC-----CChHHHHHHHHHHHHH
Q 013073 85 FVPVLFGHAVEDDFINPHHSDRIFEAYAG-D---KNIIKFEG-DHNS-----PRPQFYFDSINIFFHN 142 (450)
Q Consensus 85 kvPVLIIHGe~D~iVPpe~Se~LyEalkg-p---KeLvi~EG-gHn~-----~~peeyle~Iv~FLk~ 142 (450)
++++|-|-|+.|.+..+-|.+.-.+.+.+ + |.-++.+| ||.- .++.++.-.|.+||.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 57888899999999999999888888776 2 55566677 7954 2367888899999975
No 132
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=71.46 E-value=30 Score=32.01 Aligned_cols=56 Identities=23% Similarity=0.347 Sum_probs=37.7
Q ss_pred CCCEEEEEeCCCCCCCHH---HHHHHHHHhCCCcEEEEeCCCCCCC---ChHHHHHHHHHHH
Q 013073 85 FVPVLFGHAVEDDFINPH---HSDRIFEAYAGDKNIIKFEGDHNSP---RPQFYFDSINIFF 140 (450)
Q Consensus 85 kvPVLIIHGe~D~iVPpe---~Se~LyEalkgpKeLvi~EGgHn~~---~peeyle~Iv~FL 140 (450)
.+|.++.....|.++... ....+.+...+..+++.++|+|... +..++.+.|.+||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 168 KVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPGDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp SSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESSETTGHHSTTHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcCCCcEecchHHHHHHHHHhccC
Confidence 567999999999998877 3333444455566899999999863 2344555554443
No 133
>COG0627 Predicted esterase [General function prediction only]
Probab=70.67 E-value=5.7 Score=40.99 Aligned_cols=136 Identities=10% Similarity=-0.031 Sum_probs=79.5
Q ss_pred ccccHHHH-HHHHhccCC-CccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHHHH
Q 013073 3 LTINIVYH-SLLYGAEDP-SIAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIKV 80 (450)
Q Consensus 3 l~~sgGAT-ALm~AAe~p-~IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik~ 80 (450)
-|.|||+. ||..|+++| .++.+...||+.+........+. +..++--..+ ..+. ...........+|...
T Consensus 157 ~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~---~~~~~g~~~~-~~~~----G~~~~~~w~~~D~~~~ 228 (316)
T COG0627 157 AGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLA---MGDPWGGKAF-NAML----GPDSDPAWQENDPLSL 228 (316)
T ss_pred EEEeccchhhhhhhhhCcchhceecccccccccccccccccc---ccccccCccH-HHhc----CCCccccccccCchhH
Confidence 35566554 555667885 59999999998876632221110 0111000000 0011 1111112334444444
Q ss_pred hhc--------------cCCCEEEEEeCCCCCCC--HHHHHHHHHHhC---CCcEEEEeCCC-CCCCChHHHHHHHHHHH
Q 013073 81 AKS--------------CFVPVLFGHAVEDDFIN--PHHSDRIFEAYA---GDKNIIKFEGD-HNSPRPQFYFDSINIFF 140 (450)
Q Consensus 81 akk--------------IkvPVLIIHGe~D~iVP--pe~Se~LyEalk---gpKeLvi~EGg-Hn~~~peeyle~Iv~FL 140 (450)
+.+ ...++++-+|..|.+.. ....+.|.+++. .+..+..+++| |....-...++....|+
T Consensus 229 ~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~~w~~~l~~~~~~~ 308 (316)
T COG0627 229 IEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWYFWASQLADHLPWL 308 (316)
T ss_pred HHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHHHHHHHHHHHHHHH
Confidence 432 55788888999999986 344677777766 35667777554 98877778888888999
Q ss_pred HHhcCC
Q 013073 141 HNVLQP 146 (450)
Q Consensus 141 k~~L~~ 146 (450)
...++.
T Consensus 309 a~~l~~ 314 (316)
T COG0627 309 AGALGL 314 (316)
T ss_pred HHHhcc
Confidence 988764
No 134
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=68.56 E-value=6.1 Score=44.47 Aligned_cols=45 Identities=13% Similarity=0.186 Sum_probs=33.3
Q ss_pred hcc-CCCEEEEEeCCCCCCCHHHHHHHHHHhCC----C---cEEEEeCCC-CCC
Q 013073 82 KSC-FVPVLFGHAVEDDFINPHHSDRIFEAYAG----D---KNIIKFEGD-HNS 126 (450)
Q Consensus 82 kkI-kvPVLIIHGe~D~iVPpe~Se~LyEalkg----p---KeLvi~EGg-Hn~ 126 (450)
.++ ..|++|+||..|.++|+.|+-+-|-.+.. . -++|.+.++ |.+
T Consensus 551 g~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfD 604 (690)
T PF10605_consen 551 GNLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFD 604 (690)
T ss_pred CCcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeech
Confidence 356 68999999999999999998888866542 1 245555677 643
No 135
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=67.51 E-value=19 Score=36.59 Aligned_cols=64 Identities=20% Similarity=0.348 Sum_probs=48.0
Q ss_pred HHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEe---CC--CCCCCC--h-HHHHHHHHHHH
Q 013073 77 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKF---EG--DHNSPR--P-QFYFDSINIFF 140 (450)
Q Consensus 77 Pik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~---EG--gHn~~~--p-eeyle~Iv~FL 140 (450)
..+..+.+++|++++-..+|..+|+...+.|.+.+.. +-++..+ +| ||+-.. + +..++++..||
T Consensus 208 ~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 208 YRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 4456678999999999999999999999999999887 4444444 23 587522 2 66777777775
No 136
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=65.94 E-value=11 Score=36.56 Aligned_cols=60 Identities=13% Similarity=-0.007 Sum_probs=41.8
Q ss_pred cHHHHhhccC-CCEEEEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEeCCCCCC-CChHHHHHHHHHHHHH
Q 013073 76 NTIKVAKSCF-VPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEGDHNS-PRPQFYFDSINIFFHN 142 (450)
Q Consensus 76 sPik~akkIk-vPVLIIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~EGgHn~-~~peeyle~Iv~FLk~ 142 (450)
++...+.+++ .|+++|+|++++-..+. .+.. ..+.+.++|||.+ ...+.+.+.|.+-|+.
T Consensus 129 ~~~pei~~l~~~~v~CiyG~~E~d~~cp-------~l~~~~~~~i~lpGgHHfd~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 129 PVIPEIAKLPPAPVQCIYGEDEDDSLCP-------SLRQPGVEVIALPGGHHFDGDYDALAKRILDALKA 191 (192)
T ss_pred CchHHHHhCCCCeEEEEEcCCCCCCcCc-------cccCCCcEEEEcCCCcCCCCCHHHHHHHHHHHHhc
Confidence 5666777775 59999999988753322 1222 4678889999876 4467777777776653
No 137
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=64.35 E-value=15 Score=39.25 Aligned_cols=64 Identities=13% Similarity=0.079 Sum_probs=50.1
Q ss_pred hhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCC--cEEEEeCC-CCCC-C----ChHHHHHHHHHHHHHhc
Q 013073 81 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGD--KNIIKFEG-DHNS-P----RPQFYFDSINIFFHNVL 144 (450)
Q Consensus 81 akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgp--KeLvi~EG-gHn~-~----~peeyle~Iv~FLk~~L 144 (450)
+.++.+|+.+++|.+|-++.++..+.+....... +..+.++. .|.+ . -++.+++.|++.|+...
T Consensus 328 l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 328 LTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred ccccccCEEEEecCCcccCCHHHHHHHHHhcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 4457899999999999999999999999888763 33443555 6865 2 27888999999888665
No 138
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=64.34 E-value=6.4 Score=38.57 Aligned_cols=28 Identities=21% Similarity=0.427 Sum_probs=24.9
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhC
Q 013073 85 FVPVLFGHAVEDDFINPHHSDRIFEAYA 112 (450)
Q Consensus 85 kvPVLIIHGe~D~iVPpe~Se~LyEalk 112 (450)
..|++|+||+.|..|.+..++++.+.+.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 3699999999999999999999888765
No 139
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=61.24 E-value=17 Score=37.64 Aligned_cols=107 Identities=15% Similarity=0.078 Sum_probs=55.8
Q ss_pred cccccHHH-HHHHHhccCCC-ccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHHH
Q 013073 2 LLTINIVY-HSLLYGAEDPS-IAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIK 79 (450)
Q Consensus 2 ll~~sgGA-TALm~AAe~p~-IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik 79 (450)
|.|-|.|+ +||+.|..+|. +-+|+.-||.......-.. .++ .....++...
T Consensus 181 L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~~~--~~~-------------------------~~~~~l~~~~ 233 (299)
T COG2382 181 LAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLDTQ--PQG-------------------------EVAESLKILH 233 (299)
T ss_pred EeccccccHHHHHHHhcCchhhceeeccCCccccCccccc--ccc-------------------------chhhhhhhhh
Confidence 45556554 55555567785 7777778887754321110 000 0000112222
Q ss_pred HhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEeCCCCCCC-ChHHHHHHHH
Q 013073 80 VAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGDHNSP-RPQFYFDSIN 137 (450)
Q Consensus 80 ~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~EGgHn~~-~peeyle~Iv 137 (450)
.+.....=+|..-|+.+.+.++.. +|++.+.. +-.+..|+|||... ++..+.+.+.
T Consensus 234 a~~~~~~~~l~~g~~~~~~~~pNr--~L~~~L~~~g~~~~yre~~GgHdw~~Wr~~l~~~L~ 293 (299)
T COG2382 234 AIGTDERIVLTTGGEEGDFLRPNR--ALAAQLEKKGIPYYYREYPGGHDWAWWRPALAEGLQ 293 (299)
T ss_pred ccCccceEEeecCCccccccchhH--HHHHHHHhcCCcceeeecCCCCchhHhHHHHHHHHH
Confidence 333333345555566666666654 46666654 44577789999864 3444444444
No 140
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=58.41 E-value=6.9 Score=39.09 Aligned_cols=48 Identities=13% Similarity=0.046 Sum_probs=40.0
Q ss_pred HHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCC-CCCC
Q 013073 78 IKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS 126 (450)
Q Consensus 78 ik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EG-gHn~ 126 (450)
+.....++.|+|++.|..|.-.-++|.+.+...++. ..+-.|++ +|..
T Consensus 200 l~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~-a~~~~f~n~~hy~ 248 (270)
T KOG4627|consen 200 LWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRK-ASFTLFKNYDHYD 248 (270)
T ss_pred HHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhh-cceeecCCcchhh
Confidence 445677999999999999999889999999888765 46888888 7865
No 141
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=57.80 E-value=15 Score=36.89 Aligned_cols=42 Identities=12% Similarity=0.014 Sum_probs=31.9
Q ss_pred cccccHHHHH-HHHhccCC-CccEEEEeCCcCCHHHHHHHHHHH
Q 013073 2 LLTINIVYHS-LLYGAEDP-SIAGMVLDSPFSDLVDLMMELVDT 43 (450)
Q Consensus 2 ll~~sgGATA-Lm~AAe~p-~IKgLILDSPFSdL~dl~~e~lk~ 43 (450)
|+|.|+|+.. +.+|.+++ .|+++|+++|+.+-+..+++++..
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl 146 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRL 146 (266)
T ss_pred EEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHH
Confidence 6788877764 54666665 599999999999988887776433
No 142
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=53.80 E-value=98 Score=31.68 Aligned_cols=102 Identities=16% Similarity=0.039 Sum_probs=58.2
Q ss_pred ccHHHHHHHHhccCC--CccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHHHHhh
Q 013073 5 INIVYHSLLYGAEDP--SIAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIKVAK 82 (450)
Q Consensus 5 ~sgGATALm~AAe~p--~IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik~ak 82 (450)
|.||..++.|.++.+ .++++|+.++|.-....= ....+.+.
T Consensus 201 G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~n-------------------------------------~~l~~~la 243 (310)
T PF12048_consen 201 GTGAGWAARYLAEKPPPMPDALVLINAYWPQPDRN-------------------------------------PALAEQLA 243 (310)
T ss_pred ChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchhh-------------------------------------hhHHHHhh
Confidence 566777777777664 488999988876432210 01223455
Q ss_pred ccCCCEEEEEeCCCCCCCHHHHHHHHH--HhCCC-cEEEEeCC-CCCCCChH-HHHHHHHHHHHHh
Q 013073 83 SCFVPVLFGHAVEDDFINPHHSDRIFE--AYAGD-KNIIKFEG-DHNSPRPQ-FYFDSINIFFHNV 143 (450)
Q Consensus 83 kIkvPVLIIHGe~D~iVPpe~Se~LyE--alkgp-KeLvi~EG-gHn~~~pe-eyle~Iv~FLk~~ 143 (450)
..++|||=|++.....+--.-.++... +.+.. -+-+.+.+ .|+....+ .+.++|..||+++
T Consensus 244 ~l~iPvLDi~~~~~~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 244 QLKIPVLDIYSADNPASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGWQEQLLRRIRGWLKRH 309 (310)
T ss_pred ccCCCEEEEecCCChHHHHHHHHHHHHHHhccCCCceeEecCCCCCChhhHHHHHHHHHHHHHHhh
Confidence 788999999988833222211222211 11111 12333444 36654444 4999999999875
No 143
>COG2868 Predicted ribosomal protein [Translation, ribosomal structure and biogenesis]
Probab=52.00 E-value=23 Score=31.58 Aligned_cols=42 Identities=29% Similarity=0.608 Sum_probs=38.0
Q ss_pred CCCceeEEeccccCCCCCChHHHHHHHHHHHHHhhhhhcccCCCC
Q 013073 259 DDDQYVEYQLDDLAGFPSNVEEEERMFMEAVIMSLKDLEMRHPEV 303 (450)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (450)
+.+-|.++.+++ ||.+.-++-+-++|.++-+||.|+-++|+-
T Consensus 60 ~~~Gyl~~~ip~---~~~~~~~~~q~l~e~~~~~l~~La~~Y~~~ 101 (109)
T COG2868 60 VEGGYLYFEIPN---LPDNNKEEAQLLLESMILGLKTLAESYPEY 101 (109)
T ss_pred CCCeeEEEEcCC---CCcchHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 556699999987 899999999999999999999999999864
No 144
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=50.30 E-value=20 Score=40.81 Aligned_cols=134 Identities=14% Similarity=0.099 Sum_probs=72.5
Q ss_pred cccHHHHHHHHhc-cCCC-ccEEEEeCCcCCHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHhhhhccccccccHHHHh
Q 013073 4 TINIVYHSLLYGA-EDPS-IAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRKAIQKKAKFDITDLNTIKVA 81 (450)
Q Consensus 4 ~~sgGATALm~AA-e~p~-IKgLILDSPFSdL~dl~~e~lk~~~~~LP~~~~~~~l~flr~~Ikkr~gFdL~dlsPik~a 81 (450)
|+|.|++-.-++. .+|+ ++|+|+..||.|+-..+..- .+|-+...+..+--.. .....+.+..++|.+.+
T Consensus 555 G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~t------ilplt~sd~ee~g~p~--~~~~~~~i~~y~pv~~i 626 (712)
T KOG2237|consen 555 GGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDT------ILPLTTSDYEEWGNPE--DFEDLIKISPYSPVDNI 626 (712)
T ss_pred cccCccchhHHHhccCchHhhhhhhcCcceehhhhhccC------ccccchhhhcccCChh--hhhhhheecccCccCCC
Confidence 4444444333333 4566 99999999999975544322 1222221110000000 00111234555666666
Q ss_pred hc--cCCCEEEEEeCCCCCCCHHHHHHHHHHhCC-----Cc-----EEEEeC-CCCCCCC-hHHHH---HHHHHHHHHhc
Q 013073 82 KS--CFVPVLFGHAVEDDFINPHHSDRIFEAYAG-----DK-----NIIKFE-GDHNSPR-PQFYF---DSINIFFHNVL 144 (450)
Q Consensus 82 kk--IkvPVLIIHGe~D~iVPpe~Se~LyEalkg-----pK-----eLvi~E-GgHn~~~-peeyl---e~Iv~FLk~~L 144 (450)
.. .-.-+|+.-+.+|..|++.++.++.++++. .+ .+.+.. |||.... +...+ .-..+||.+.+
T Consensus 627 ~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~ 706 (712)
T KOG2237|consen 627 KKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLAKML 706 (712)
T ss_pred chhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCCchHHHHHHHHHHHHHHHHHh
Confidence 54 246689999999999999888888777652 22 233333 4697643 22222 23456787776
Q ss_pred C
Q 013073 145 Q 145 (450)
Q Consensus 145 ~ 145 (450)
.
T Consensus 707 ~ 707 (712)
T KOG2237|consen 707 N 707 (712)
T ss_pred c
Confidence 5
No 145
>COG3150 Predicted esterase [General function prediction only]
Probab=49.53 E-value=22 Score=34.43 Aligned_cols=48 Identities=13% Similarity=0.159 Sum_probs=37.6
Q ss_pred EEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCC-CCCCChHHHHHHHHHHHH
Q 013073 90 FGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGD-HNSPRPQFYFDSINIFFH 141 (450)
Q Consensus 90 IIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGg-Hn~~~peeyle~Iv~FLk 141 (450)
++.-+.|.+-.+.++...|..+. ..+++|| |.+..-..|++.|..|+.
T Consensus 139 lL~qtgDEvLDyr~a~a~y~~~~----~~V~dgg~H~F~~f~~~l~~i~aF~g 187 (191)
T COG3150 139 LLSQTGDEVLDYRQAVAYYHPCY----EIVWDGGDHKFKGFSRHLQRIKAFKG 187 (191)
T ss_pred eecccccHHHHHHHHHHHhhhhh----heeecCCCccccchHHhHHHHHHHhc
Confidence 44455599999999988887765 4455555 999988999999999975
No 146
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=49.19 E-value=13 Score=41.22 Aligned_cols=24 Identities=13% Similarity=0.299 Sum_probs=22.9
Q ss_pred hhccCCCEEEEEeCCCCCCCHHHH
Q 013073 81 AKSCFVPVLFGHAVEDDFINPHHS 104 (450)
Q Consensus 81 akkIkvPVLIIHGe~D~iVPpe~S 104 (450)
+++|++|++++.|..|.++|++|+
T Consensus 293 Lr~Ir~Piivfas~gDnITPP~Qa 316 (581)
T PF11339_consen 293 LRNIRSPIIVFASYGDNITPPQQA 316 (581)
T ss_pred hhhCCCCEEEEeccCCCCCChhHh
Confidence 578999999999999999999999
No 147
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=45.01 E-value=1.4e+02 Score=31.83 Aligned_cols=74 Identities=20% Similarity=0.254 Sum_probs=42.4
Q ss_pred hccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCC--cEEEEeCCC-CC-CCC--------------------h----HHHH
Q 013073 82 KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGD--KNIIKFEGD-HN-SPR--------------------P----QFYF 133 (450)
Q Consensus 82 kkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgp--KeLvi~EGg-Hn-~~~--------------------p----eeyl 133 (450)
.+++-|+|||.- |.+--.+.-..+.+-+..+ ..++.+.|. |- +.. | +-..
T Consensus 284 ~~arqP~~finv--~~fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~dpy~~~~~~~ 361 (399)
T KOG3847|consen 284 SQARQPTLFINV--EDFQWNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETDPYEAMQIAI 361 (399)
T ss_pred hhccCCeEEEEc--ccccchhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHHHHHhccCCCCChHHHHHHHH
Confidence 357889999982 2232223333333333332 357778887 72 211 1 1234
Q ss_pred HHHHHHHHHhcCCCCCCCCccccc
Q 013073 134 DSINIFFHNVLQPPEDEVGPTLIG 157 (450)
Q Consensus 134 e~Iv~FLk~~L~~~~d~~~~~~~~ 157 (450)
+...+||++++..-++....+|-+
T Consensus 362 r~slaFLq~h~d~~q~~nd~~~~~ 385 (399)
T KOG3847|consen 362 RASLAFLQKHLDLVQDLNDWKLIE 385 (399)
T ss_pred HHHHHHHHhhhhhhccccchhhhh
Confidence 567789999987777666666533
No 148
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=43.78 E-value=1.1e+02 Score=30.38 Aligned_cols=42 Identities=19% Similarity=0.315 Sum_probs=34.6
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhCCC-cEEEEeCCC--CCC
Q 013073 85 FVPVLFGHAVEDDFINPHHSDRIFEAYAGD-KNIIKFEGD--HNS 126 (450)
Q Consensus 85 kvPVLIIHGe~D~iVPpe~Se~LyEalkgp-KeLvi~EGg--Hn~ 126 (450)
...+.|+.|.+|.+||.++-++|.+++++. .++.+.+.+ |.+
T Consensus 221 ~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~~~i~HaF 265 (266)
T PF10230_consen 221 GDKLWFYFGQNDHWVPNETRDELIERYPGHEPDVVVDEEGIPHAF 265 (266)
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCCeEEEecCCCCCCC
Confidence 789999999999999999999999999963 455555544 764
No 149
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=38.25 E-value=2.2e+02 Score=33.86 Aligned_cols=62 Identities=8% Similarity=-0.099 Sum_probs=42.5
Q ss_pred hccCCCEEEEEeCCCCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCCChHHHHHHHHHHHHHhc
Q 013073 82 KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSPRPQFYFDSINIFFHNVL 144 (450)
Q Consensus 82 kkIkvPVLIIHGe~D~iVPpe~Se~LyEalkgpKeLvi~EGgHn~~~peeyle~Iv~FLk~~L 144 (450)
..+.+|++++.|..|..++.......-+.. +...++.++|+|...........+..+|.+.+
T Consensus 1233 ~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-~~~~~~~v~g~H~~~~~~~~~~~~~~~l~~~l 1294 (1296)
T PRK10252 1233 VPFDGKATLFVAERTLQEGMSPEQAWSPWI-AELDVYRQDCAHVDIISPEAFEKIGPILRATL 1294 (1296)
T ss_pred CcccCceEEEEcCCCCcccCCcccchhhhc-CCCEEEECCCCHHHHCCcHHHHHHHHHHHHHh
Confidence 346789999999999776655544443333 55677888999976444445677777777654
No 150
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=36.00 E-value=1.4e+02 Score=33.70 Aligned_cols=48 Identities=15% Similarity=0.167 Sum_probs=33.2
Q ss_pred cHHHHhhccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEeCCCCC
Q 013073 76 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEGDHN 125 (450)
Q Consensus 76 sPik~akkIkvPVLIIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~EGgHn 125 (450)
+-.....++++|+|.|.|-.|.. .+..-++|..+.. +..+++-+-.|.
T Consensus 243 ~~~~d~~~i~vP~L~i~gW~D~~--l~~~~~~~~~~~~r~~~lvvgPw~H~ 291 (563)
T COG2936 243 DRVADLSKIKVPALVIGGWSDGY--LHTAIKLFAFLRSRPVKLVVGPWTHG 291 (563)
T ss_pred CcccccccCCCcEEEEccccccc--ccchHHHhhhcccCCceeEEcccccC
Confidence 33445567999999999999984 4566778888776 344555444453
No 151
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=35.38 E-value=4.4e+02 Score=27.80 Aligned_cols=57 Identities=11% Similarity=0.128 Sum_probs=35.6
Q ss_pred ccCCCEEEEEeCCCCCCCHHHHHHHHHHhCC-CcEEEEeCC-C-CC-CCChHHHHHHHHHHHH
Q 013073 83 SCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEG-D-HN-SPRPQFYFDSINIFFH 141 (450)
Q Consensus 83 kIkvPVLIIHGe~D~iVPpe~Se~LyEalkg-pKeLvi~EG-g-Hn-~~~peeyle~Iv~FLk 141 (450)
..+||+|++.|.+=+.+. .+.+...++.. ...++.+.+ | -. +..|..+.+.+.=||+
T Consensus 244 tlkc~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 244 TLKCPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred cccccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 356999999998865432 44444444433 234555543 4 32 3468888888887776
No 152
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=33.35 E-value=1.3e+02 Score=32.23 Aligned_cols=54 Identities=15% Similarity=0.107 Sum_probs=34.9
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhCC--------CcEEEEeCCC-CCCCChHHHHHHHHHHHH
Q 013073 85 FVPVLFGHAVEDDFINPHHSDRIFEAYAG--------DKNIIKFEGD-HNSPRPQFYFDSINIFFH 141 (450)
Q Consensus 85 kvPVLIIHGe~D~iVPpe~Se~LyEalkg--------pKeLvi~EGg-Hn~~~peeyle~Iv~FLk 141 (450)
.+-++++.|++.-+- .+.+++.+.+.. ..++++.+|| |..+ .-.|-+.+..|.+
T Consensus 302 ~~~vfVi~Ge~Evfr--ddI~~~~~~~~~~~~~~~~~~~nv~~~~~G~Hi~P-~~~~~~~~~~W~~ 364 (374)
T PF10340_consen 302 KYSVFVIYGEDEVFR--DDILEWAKKLNDVKPNKFSNSNNVYIDEGGIHIGP-ILNYSRDLDKWSK 364 (374)
T ss_pred CCcEEEEECCccccH--HHHHHHHHHHhhcCccccCCcceEEEecCCccccc-hhhhhcCHHHHhc
Confidence 367999999887554 477777777652 2467777776 9763 2345555555544
No 153
>PF13887 MRF_C1: Myelin gene regulatory factor -C-terminal domain 1
Probab=32.50 E-value=28 Score=25.35 Aligned_cols=12 Identities=50% Similarity=0.764 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHH
Q 013073 280 EEERMFMEAVIM 291 (450)
Q Consensus 280 ~~~~~~~~~~~~ 291 (450)
+++|+|||.|..
T Consensus 4 dk~rifmEnV~A 15 (36)
T PF13887_consen 4 DKERIFMENVGA 15 (36)
T ss_pred cHHHHHHHHHHH
Confidence 579999998864
No 154
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=29.96 E-value=1.4e+02 Score=30.32 Aligned_cols=58 Identities=10% Similarity=0.045 Sum_probs=43.0
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhC--C--C--------------------cEEEEeCC-CCCC-CChHHHHHHHHH
Q 013073 85 FVPVLFGHAVEDDFINPHHSDRIFEAYA--G--D--------------------KNIIKFEG-DHNS-PRPQFYFDSINI 138 (450)
Q Consensus 85 kvPVLIIHGe~D~iVPpe~Se~LyEalk--g--p--------------------KeLvi~EG-gHn~-~~peeyle~Iv~ 138 (450)
.++|||..|..|-+||+-..+++.++++ + + -.++++.| ||.- ..|+..++.+..
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~~~ 312 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 312 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHHHH
Confidence 4899999999999999999999988765 1 0 01223334 5854 348889999999
Q ss_pred HHHH
Q 013073 139 FFHN 142 (450)
Q Consensus 139 FLk~ 142 (450)
||..
T Consensus 313 fi~~ 316 (319)
T PLN02213 313 WISG 316 (319)
T ss_pred HHcC
Confidence 9864
No 155
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=26.27 E-value=37 Score=34.21 Aligned_cols=30 Identities=13% Similarity=0.191 Sum_probs=23.1
Q ss_pred cccccHHH-HHHHHhccCC-CccEEEEeCCcC
Q 013073 2 LLTINIVY-HSLLYGAEDP-SIAGMVLDSPFS 31 (450)
Q Consensus 2 ll~~sgGA-TALm~AAe~p-~IKgLILDSPFS 31 (450)
|+|-|+|+ +|+.+|.++| .|+++|+.++..
T Consensus 142 lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~ 173 (343)
T PRK08775 142 FVGYSYGALVGLQFASRHPARVRTLVVVSGAH 173 (343)
T ss_pred EEEECHHHHHHHHHHHHChHhhheEEEECccc
Confidence 67888776 6666677887 599999998754
No 156
>PLN02965 Probable pheophorbidase
Probab=25.35 E-value=43 Score=31.78 Aligned_cols=29 Identities=10% Similarity=-0.174 Sum_probs=22.4
Q ss_pred cccccHHHH-HHHHhccCC-CccEEEEeCCc
Q 013073 2 LLTINIVYH-SLLYGAEDP-SIAGMVLDSPF 30 (450)
Q Consensus 2 ll~~sgGAT-ALm~AAe~p-~IKgLILDSPF 30 (450)
|+|-|+|+. ++.+|.++| .|+++|+.++.
T Consensus 76 lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 106 (255)
T PLN02965 76 LVGHSIGGGSVTEALCKFTDKISMAIYVAAA 106 (255)
T ss_pred EEecCcchHHHHHHHHhCchheeEEEEEccc
Confidence 677788777 677777776 59999998875
No 157
>PRK14285 chaperone protein DnaJ; Provisional
Probab=24.21 E-value=70 Score=33.53 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=30.7
Q ss_pred CCceeEEeccccCCCCCChHHHHHHHHHHHHHhhhhhc
Q 013073 260 DDQYVEYQLDDLAGFPSNVEEEERMFMEAVIMSLKDLE 297 (450)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (450)
-|.||++++. +|....+++|.+++.+++.+||+.
T Consensus 325 GDL~V~~~v~----~P~~l~~~q~~~l~~l~~~~~~~~ 358 (365)
T PRK14285 325 GNLILIIKIK----TPKNLNSNAIKLLENLSKELKDID 358 (365)
T ss_pred CCEEEEEEEE----CCCCCCHHHHHHHHHHHHHhcccc
Confidence 6789999885 788899999999999999999985
No 158
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=23.92 E-value=2e+02 Score=31.12 Aligned_cols=29 Identities=17% Similarity=-0.185 Sum_probs=25.6
Q ss_pred cCCCEEEEEeCCCCCCCHHHHHHHHHHhC
Q 013073 84 CFVPVLFGHAVEDDFINPHHSDRIFEAYA 112 (450)
Q Consensus 84 IkvPVLIIHGe~D~iVPpe~Se~LyEalk 112 (450)
..++|||.+|..|-+||+-..+++.+.++
T Consensus 363 ~gikVLiYnGd~D~icn~~Gt~~wi~~L~ 391 (462)
T PTZ00472 363 DGVRVMIYAGDMDFICNWIGNKAWTLALQ 391 (462)
T ss_pred cCceEEEEECCcCeecCcHhHHHHHHhCC
Confidence 35899999999999999999998888764
No 159
>PRK14553 hypothetical protein; Provisional
Probab=23.89 E-value=1.1e+02 Score=26.60 Aligned_cols=42 Identities=29% Similarity=0.619 Sum_probs=35.3
Q ss_pred CCCceeEEeccccCCCCCChHHHHHHHHHHHHHhhhhhcccCCCC
Q 013073 259 DDDQYVEYQLDDLAGFPSNVEEEERMFMEAVIMSLKDLEMRHPEV 303 (450)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (450)
.++-|+.+.+. +++.+..+.-..+|+.++-.||+++-++|+.
T Consensus 59 ~~~G~l~~~l~---~~~~~~~~~~q~ll~~~~~gl~~i~~~Yp~~ 100 (108)
T PRK14553 59 SEDGYLEFELP---DFDEENNEKLQLLLETLELGLKSLEFQYPKY 100 (108)
T ss_pred ccCCEEEEEec---CCCccccHHHHHHHHHHHHHHHHHHHhCccc
Confidence 47789999887 5666667778899999999999999999864
No 160
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.86 E-value=1.9e+02 Score=30.70 Aligned_cols=65 Identities=15% Similarity=0.285 Sum_probs=48.1
Q ss_pred cCCCEEEEEeCCCCCCCHHHHHHHHHHhCC---CcEEEEe-CCCCCC---CChHHHHHHHHHHHHHhcCCCC
Q 013073 84 CFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKF-EGDHNS---PRPQFYFDSINIFFHNVLQPPE 148 (450)
Q Consensus 84 IkvPVLIIHGe~D~iVPpe~Se~LyEalkg---pKeLvi~-EGgHn~---~~peeyle~Iv~FLk~~L~~~~ 148 (450)
...+.|.+-+..|.++|..+.+++.+..+. ...-+-+ ++.|.. ..+..|++...+||+.......
T Consensus 224 ~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~~~ 295 (350)
T KOG2521|consen 224 LPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISSYN 295 (350)
T ss_pred ccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccccC
Confidence 478999999999999999999999654432 2223333 344654 5689999999999998876444
No 161
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=23.43 E-value=1.4e+02 Score=30.41 Aligned_cols=58 Identities=19% Similarity=0.253 Sum_probs=40.6
Q ss_pred cCCCEEEEEeCCCCCCCHHHHHHHHHHhC--CC------------------c-----EEEEeCC-CCCC--CChHHHHHH
Q 013073 84 CFVPVLFGHAVEDDFINPHHSDRIFEAYA--GD------------------K-----NIIKFEG-DHNS--PRPQFYFDS 135 (450)
Q Consensus 84 IkvPVLIIHGe~D~iVPpe~Se~LyEalk--gp------------------K-----eLvi~EG-gHn~--~~peeyle~ 135 (450)
-.+.|||.+|..|-+||.-..+...+.+. +. | .++.+.| ||.. ..|+..++.
T Consensus 329 ~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m 408 (415)
T PF00450_consen 329 NGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQM 408 (415)
T ss_dssp TT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHH
T ss_pred ccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHH
Confidence 44999999999999999999999998754 10 0 2445555 5875 348888999
Q ss_pred HHHHHH
Q 013073 136 INIFFH 141 (450)
Q Consensus 136 Iv~FLk 141 (450)
+..||+
T Consensus 409 ~~~fl~ 414 (415)
T PF00450_consen 409 FRRFLK 414 (415)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 999885
No 162
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=22.38 E-value=1.5e+02 Score=29.15 Aligned_cols=61 Identities=16% Similarity=0.153 Sum_probs=34.5
Q ss_pred CCCEEEEEeCCC-CCCCHHHHHHHHHHhC-CCcEEEEeCCC-CCCCC-------hHHHHHHHHHHHHHhcC
Q 013073 85 FVPVLFGHAVED-DFINPHHSDRIFEAYA-GDKNIIKFEGD-HNSPR-------PQFYFDSINIFFHNVLQ 145 (450)
Q Consensus 85 kvPVLIIHGe~D-~iVPpe~Se~LyEalk-gpKeLvi~EGg-Hn~~~-------peeyle~Iv~FLk~~L~ 145 (450)
+.|++||||... ....+......+.+.+ ...+++-+.-| ..... ..++..+|..|+.+++.
T Consensus 1 ~~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~ 71 (219)
T PF01674_consen 1 NRPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLA 71 (219)
T ss_dssp S--EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHH
Confidence 369999999998 6666666666666544 23456665433 22211 23556899999998873
No 163
>PF15603 Imm45: Immunity protein 45
Probab=22.14 E-value=1.4e+02 Score=25.29 Aligned_cols=61 Identities=28% Similarity=0.427 Sum_probs=41.6
Q ss_pred CcceeeecCCCCC---CCCCCCCccCCCc-eeEEeccccC--CCCCCh----HHHHHHHHHHHHHhhhhhcc
Q 013073 237 SNMISFELSDGHP---YGPHVPTAMDDDQ-YVEYQLDDLA--GFPSNV----EEEERMFMEAVIMSLKDLEM 298 (450)
Q Consensus 237 ~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~ 298 (450)
++-|.|+|.||+- +|-.+-...|++- ||-| +|++. +-|++- +.|.-.+++||.+.+.+.-+
T Consensus 7 ~s~i~~el~~G~~~~~~GE~l~~~~~~~~~Fvvy-~~si~~We~P~e~~~it~~e~q~II~aI~~~~~~~~~ 77 (82)
T PF15603_consen 7 RSYITFELEEGARRKAQGEMLLTGNDNDGDFVVY-KDSIKNWEPPHENEPITIAERQKIIEAIEKYFSERGM 77 (82)
T ss_pred CCceEEEecCCEEEEEeeeEEEeccCCCcCEEEE-ccccccccCCCCCcccCHHHHHHHHHHHHHHHhcCce
Confidence 5578999999953 5666666555544 8888 57777 234443 25666788999888776544
Done!