BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013074
(450 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 133/235 (56%), Gaps = 9/235 (3%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
IS H N++ L GFC+ R L+Y +M NGS+ + S+P L W K I +
Sbjct: 89 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP--LDWPKRQRIAL 146
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
G A+GL YLH C +I+H D+K NILLD++F + DFGLAKL K V R
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX--AVR 204
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLD-SGVDNSSEVYFPHWIYR 363
GTIG+IA E S G+ S K+DV+ +G+M++EL+ + D + + N +V W+
Sbjct: 205 GTIGHIAPEYLS--TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 364 HVEQDREFKLLGVVTKK--ENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGS 416
+++ + L+ V + ++E +++I V L C Q+ P +RP M+EV+ ML+G
Sbjct: 263 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 132/235 (56%), Gaps = 9/235 (3%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
IS H N++ L GFC+ R L+Y +M NGS+ + S+P L W K I +
Sbjct: 81 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP--LDWPKRQRIAL 138
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
G A+GL YLH C +I+H D+K NILLD++F + DFGLAKL K V R
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX--AVR 196
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLD-SGVDNSSEVYFPHWIYR 363
G IG+IA E S G+ S K+DV+ +G+M++EL+ + D + + N +V W+
Sbjct: 197 GXIGHIAPEYLS--TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 364 HVEQDREFKLLGVVTKK--ENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGS 416
+++ + L+ V + ++E +++I V L C Q+ P +RP M+EV+ ML+G
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 126/230 (54%), Gaps = 17/230 (7%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H ++V+L+GFC E N LIY++M NG+L++ +Y D P + WE+ EI IG A+G
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDL--PTMSMSWEQRLEICIGAARG 151
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
L YLH + I+H D+K NILLD++F PKI+DFG++K T+ G +GT+GY
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK-KGTELGQTHLXXVVKGTLGY 207
Query: 310 IALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
I E F + G ++ KSDVYSFG+++ E++ ++ + + V W VE
Sbjct: 208 IDPEYFIK--GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM-VNLAEWA---VESHN 261
Query: 370 EFKLLGVV-----TKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+L +V K E +K + C+ DRP M +V+ L+
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 125/230 (54%), Gaps = 17/230 (7%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H ++V+L+GFC E N LIY++M NG+L++ +Y D P + WE+ EI IG A+G
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDL--PTMSMSWEQRLEICIGAARG 151
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
L YLH + I+H D+K NILLD++F PKI+DFG++K T + +GT+GY
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV-VKGTLGY 207
Query: 310 IALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
I E F + G ++ KSDVYSFG+++ E++ ++ + + V W VE
Sbjct: 208 IDPEYFIK--GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM-VNLAEWA---VESHN 261
Query: 370 EFKLLGVV-----TKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+L +V K E +K + C+ DRP M +V+ L+
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 27/241 (11%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+++ H N+V LLGF +G++ L+Y +MPNGSL + D + P L W +I
Sbjct: 84 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP---LSWHMRCKIAQ 140
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
G A G+ +LH +H DIK NILLD+ F KISDFGLA+ + +++ +R
Sbjct: 141 GAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQTVMXSR 194
Query: 305 --GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
GT Y+A E GE++ KSD+YSFG++++E++ +G+ E P +
Sbjct: 195 IVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEII-------TGLPAVDEHREPQLLL 244
Query: 363 RHVEQDREFKLLGV--VTKKENEI----AKKMIIVGLWCIQARPYDRPPMNEVIEMLQGS 416
E+ + + + KK N+ + M V C+ + RP + +V ++LQ
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
Query: 417 T 417
T
Sbjct: 305 T 305
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 122/241 (50%), Gaps = 27/241 (11%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+++ H N+V LLGF +G++ L+Y +MPNGSL + D + P L W +I
Sbjct: 84 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP---LSWHMRCKIAQ 140
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
G A G+ +LH +H DIK NILLD+ F KISDFGLA+ + +++ R
Sbjct: 141 GAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQTVMXXR 194
Query: 305 --GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
GT Y+A E GE++ KSD+YSFG++++E++ +G+ E P +
Sbjct: 195 IVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEII-------TGLPAVDEHREPQLLL 244
Query: 363 RHVEQDREFKLLGV--VTKKENEI----AKKMIIVGLWCIQARPYDRPPMNEVIEMLQGS 416
E+ + + + KK N+ + M V C+ + RP + +V ++LQ
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
Query: 417 T 417
T
Sbjct: 305 T 305
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 121/241 (50%), Gaps = 27/241 (11%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+++ H N+V LLGF +G++ L+Y +MPNGSL + D + P L W +I
Sbjct: 78 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP---LSWHMRCKIAQ 134
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
G A G+ +LH +H DIK NILLD+ F KISDFGLA+ + ++ R
Sbjct: 135 GAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQXVMXXR 188
Query: 305 --GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
GT Y+A E GE++ KSD+YSFG++++E++ +G+ E P +
Sbjct: 189 IVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEII-------TGLPAVDEHREPQLLL 238
Query: 363 RHVEQDREFKLLGV--VTKKENEI----AKKMIIVGLWCIQARPYDRPPMNEVIEMLQGS 416
E+ + + + KK N+ + M V C+ + RP + +V ++LQ
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
Query: 417 T 417
T
Sbjct: 299 T 299
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 27/240 (11%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG 245
++ H N+V LLGF +G++ L+Y + PNGSL + D + P L W +I G
Sbjct: 76 AKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP---LSWHXRCKIAQG 132
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR- 304
A G+ +LH +H DIK NILLD+ F KISDFGLA+ + + +R
Sbjct: 133 AANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQXVXXSRI 186
Query: 305 -GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYR 363
GT Y A E GE++ KSD+YSFG++++E++ +G+ E P +
Sbjct: 187 VGTTAYXAPEALR---GEITPKSDIYSFGVVLLEII-------TGLPAVDEHREPQLLLD 236
Query: 364 HVEQDREFKLLGV--VTKKENEIAKKMI----IVGLWCIQARPYDRPPMNEVIEMLQGST 417
E+ + + + KK N+ + V C+ + RP + +V ++LQ T
Sbjct: 237 IKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQEXT 296
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 142
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI-VSSLLGARGT 306
KG++YL S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 143 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLP 199
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 200 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 23/244 (9%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
+A + R H N+V +G + N +++ E++ GSL + ++ S + L +
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK---SGAREQLDERRRLS 141
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLL 301
+ +AKG+ YLH + I+H ++K N+L+D+ + K+ DFGL++L K S
Sbjct: 142 MAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL---KASTFLSSK 197
Query: 302 GARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWI 361
A GT ++A EV + KSDVYSFG+++ EL + G N ++V
Sbjct: 198 SAAGTPEWMAPEVLRDE--PSNEKSDVYSFGVILWELATLQQPW--GNLNPAQVV----- 248
Query: 362 YRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTEALQ 421
+ K L + ++A II G W + P+ RP ++++L+ ++
Sbjct: 249 ---AAVGFKCKRLEIPRNLNPQVAA--IIEGCWTNE--PWKRPSFATIMDLLRPLIKSAV 301
Query: 422 IPPT 425
PP
Sbjct: 302 PPPN 305
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 161
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI-VSSLLGARGT 306
KG++YL S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 162 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 218
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 219 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 249
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 141
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI-VSSLLGARGT 306
KG++YL S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 142 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 198
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 199 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 138
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI-VSSLLGARGT 306
KG++YL S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 139 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 195
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 196 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 226
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 143
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI-VSSLLGARGT 306
KG++YL S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 144 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 201 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 142
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI-VSSLLGARGT 306
KG++YL S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 143 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 199
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 200 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 143
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI-VSSLLGARGT 306
KG++YL S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 144 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 201 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 135
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI-VSSLLGARGT 306
KG++YL S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 136 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 192
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 193 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 223
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 140
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI-VSSLLGARGT 306
KG++YL S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 141 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 197
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 198 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 228
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 162
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI-VSSLLGARGT 306
KG++YL S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 163 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 219
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 220 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 250
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 23/244 (9%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
+A + R H N+V +G + N +++ E++ GSL + ++ S + L +
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK---SGAREQLDERRRLS 141
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLL 301
+ +AKG+ YLH + I+H D+K N+L+D+ + K+ DFGL++L K
Sbjct: 142 MAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL---KASXFLXSK 197
Query: 302 GARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWI 361
A GT ++A EV + KSDVYSFG+++ EL + G N ++V
Sbjct: 198 XAAGTPEWMAPEVLRDE--PSNEKSDVYSFGVILWELATLQQPW--GNLNPAQVV----- 248
Query: 362 YRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTEALQ 421
+ K L + ++A II G W + P+ RP ++++L+ ++
Sbjct: 249 ---AAVGFKCKRLEIPRNLNPQVAA--IIEGCWTNE--PWKRPSFATIMDLLRPLIKSAV 301
Query: 422 IPPT 425
PP
Sbjct: 302 PPPN 305
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 144
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKK-GIVSSLLGARGT 306
KG+++L S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 145 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLP 201
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 202 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 141
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKK-GIVSSLLGARGT 306
KG+++L S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 142 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 198
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 199 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 143
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKK-GIVSSLLGARGT 306
KG+++L S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 144 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 201 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 202
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKK-GIVSSLLGARGT 306
KG+++L S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 203 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 259
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 260 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 290
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 143
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKK-GIVSSLLGARGT 306
KG+++L S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 144 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 201 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 144
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKK-GIVSSLLGARGT 306
KG+++L S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 145 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 201
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 202 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 189 SHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
SH NV++LLG CL L+ +M +G L F+ N +T P + + + +A
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVA 148
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKK-GIVSSLLGARGT 306
KG+++L S + +H D+ N +LD+ F K++DFGLA+ K+ V + GA+
Sbjct: 149 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 205
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ ++ALE S + + KSDV+SFG+++ EL+
Sbjct: 206 VKWMALE--SLQTQKFTTKSDVWSFGVLLWELM 236
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 44/242 (18%)
Query: 187 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
+ SH +V L G CLE L++EFM +G L ++ E + + + +
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDV 110
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
+G+ YL C ++H D+ N L+ ++ K+SDFG+ + + +S G +
Sbjct: 111 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFP 165
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL-----VGCKNNLDSGV--DNSS--EVYF 357
+ + + EVFS F S KSDV+SFG+++ E+ + +N +S V D S+ +Y
Sbjct: 166 VKWASPEVFS--FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 223
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGST 417
P HV Q + C + RP DRP + ++ L
Sbjct: 224 PRLASTHVYQ-----------------------IMNHCWKERPEDRPAFSRLLRQLAEIA 260
Query: 418 EA 419
E+
Sbjct: 261 ES 262
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 36/251 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
L +SR +H N+V L G CL N L+ E+ GSL ++ + P Y
Sbjct: 53 LRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAE---PLPYYTAAHAMS 107
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILL-DQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ ++G+ YLH ++H D+KP N+LL KI DFG A C I + +
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA--CD----IQTHM 161
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHW 360
+G+ ++A EVF + S K DV+S+G+++ E++ + D E+ P +
Sbjct: 162 TNNKGSAAWMAPEVFEGS--NYSEKCDVFSWGIILWEVITRRKPFD-------EIGGPAF 212
Query: 361 -IYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ----- 414
I V L+ + K + + C P RP M E+++++
Sbjct: 213 RIMWAVHNGTRPPLIKNLPKPIESLMTR-------CWSKDPSQRPSMEEIVKIMTHLMRY 265
Query: 415 --GSTEALQIP 423
G+ E LQ P
Sbjct: 266 FPGADEPLQYP 276
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 78/161 (48%), Gaps = 26/161 (16%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H N++ L G CL+ N L+ EF G L + V +G P + W + IA+
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNR-VLSGKRIPPDILVNW------AVQIAR 116
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDF--------CPKISDFGLAKLC--TTKKGIVS 298
G+ YLH I+H D+K NIL+ Q KI+DFGLA+ TTK
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK----- 171
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ A G ++A EV + S SDV+S+G+++ EL+
Sbjct: 172 --MSAAGAYAWMAPEVIRASM--FSKGSDVWSYGVLLWELL 208
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 44/242 (18%)
Query: 187 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
+ SH +V L G CLE L++EFM +G L ++ E + + + +
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDV 112
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
+G+ YL C ++H D+ N L+ ++ K+SDFG+ + + +S G +
Sbjct: 113 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFP 167
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL-----VGCKNNLDSGV----DNSSEVYF 357
+ + + EVFS F S KSDV+SFG+++ E+ + +N +S V +Y
Sbjct: 168 VKWASPEVFS--FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 225
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGST 417
P HV Q + C + RP DRP + ++ L
Sbjct: 226 PRLASTHVYQ-----------------------IMNHCWKERPEDRPAFSRLLRQLAEIA 262
Query: 418 EA 419
E+
Sbjct: 263 ES 264
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 44/242 (18%)
Query: 187 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
+ SH +V L G CLE L++EFM +G L ++ E + + + +
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDV 132
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
+G+ YL C ++H D+ N L+ ++ K+SDFG+ + + +S G +
Sbjct: 133 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFP 187
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL-----VGCKNNLDSGV----DNSSEVYF 357
+ + + EVFS F S KSDV+SFG+++ E+ + +N +S V +Y
Sbjct: 188 VKWASPEVFS--FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 245
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGST 417
P HV Q + C + RP DRP + ++ L
Sbjct: 246 PRLASTHVYQ-----------------------IMNHCWKERPEDRPAFSRLLRQLAEIA 282
Query: 418 EA 419
E+
Sbjct: 283 ES 284
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 44/242 (18%)
Query: 187 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
+ SH +V L G CLE L++EFM +G L ++ E + + + +
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDV 115
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
+G+ YL C ++H D+ N L+ ++ K+SDFG+ + + +S G +
Sbjct: 116 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFP 170
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL-----VGCKNNLDSGV----DNSSEVYF 357
+ + + EVFS F S KSDV+SFG+++ E+ + +N +S V +Y
Sbjct: 171 VKWASPEVFS--FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 228
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGST 417
P HV Q + C + RP DRP + ++ L
Sbjct: 229 PRLASTHVYQ-----------------------IMNHCWRERPEDRPAFSRLLRQLAEIA 265
Query: 418 EA 419
E+
Sbjct: 266 ES 267
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 36/251 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
L +SR +H N+V L G CL N L+ E+ GSL ++ + P Y
Sbjct: 52 LRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAE---PLPYYTAAHAMS 106
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILL-DQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ ++G+ YLH ++H D+KP N+LL KI DFG A C I + +
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA--CD----IQTHM 160
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHW 360
+G+ ++A EVF + S K DV+S+G+++ E++ + D E+ P +
Sbjct: 161 TNNKGSAAWMAPEVFEGS--NYSEKCDVFSWGIILWEVITRRKPFD-------EIGGPAF 211
Query: 361 -IYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ----- 414
I V L+ + K + + C P RP M E+++++
Sbjct: 212 RIMWAVHNGTRPPLIKNLPKPIESLMTR-------CWSKDPSQRPSMEEIVKIMTHLMRY 264
Query: 415 --GSTEALQIP 423
G+ E LQ P
Sbjct: 265 FPGADEPLQYP 275
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV----LLYM 114
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T + G
Sbjct: 115 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA--G 169
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D P +Y
Sbjct: 170 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGID-------PSQVY 220
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 221 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 265
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 89/159 (55%), Gaps = 11/159 (6%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
+A + +T HVN++ +G+ + +N A++ ++ SL K ++ +T + ++ +
Sbjct: 83 VAVLRKTRHVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETK-----FQMFQLID 136
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLL 301
I A+G++YLH + I+H D+K +NI L + KI DFGLA + + G +
Sbjct: 137 IARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG-SQQVE 192
Query: 302 GARGTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELV 339
G++ ++A EV ++ S +SDVYS+G+++ EL+
Sbjct: 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM 231
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 83/155 (53%), Gaps = 12/155 (7%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ + H +V L E ++ E+M GSL F+ G+T K YLR ++ ++
Sbjct: 57 MKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFL-KGETGK---YLRLPQLVDMAA 111
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
IA G+ Y+ R +H D++ NIL+ ++ K++DFGLA+L + ++ GA+
Sbjct: 112 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE--XTARQGAK 166
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
I + A E + +G + KSDV+SFG+++ EL
Sbjct: 167 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELT 199
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 14/156 (8%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIV 243
++ H ++V LLG CL + L+ + MP+G L ++V+ + Q L W
Sbjct: 71 MASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------C 123
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
+ IAKG+ YL R++H D+ N+L+ KI+DFGLA+L + ++ G
Sbjct: 124 VQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA-DGG 179
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ I ++ALE ++ + +H+SDV+S+G+ I EL+
Sbjct: 180 KMPIKWMALECI--HYRKFTHQSDVWSYGVTIWELM 213
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+T K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 338 IVTEYMSKGSLLDFL-KGETGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 390
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E +G + KSD
Sbjct: 391 AANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPEAAL--YGRFTIKSD 446
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 447 VWSFGILLTELT 458
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 25/227 (11%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYM 114
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T + G
Sbjct: 115 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA--G 169
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D P +Y
Sbjct: 170 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGID-------PSQVY 220
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEV 409
+E+D + +K E+ + C Q P DRP E+
Sbjct: 221 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 260
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYM 114
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 115 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TFTAHAG 169
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D P +Y
Sbjct: 170 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGID-------PSQVY 220
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEV 409
+E+D + +K E+ + C Q P DRP E+
Sbjct: 221 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 260
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 14/156 (8%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIV 243
++ H ++V LLG CL + L+ + MP+G L ++V+ + Q L W
Sbjct: 94 MASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------C 146
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
+ IAKG+ YL R++H D+ N+L+ KI+DFGLA+L + ++ G
Sbjct: 147 VQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA-DGG 202
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ I ++ALE ++ + +H+SDV+S+G+ I EL+
Sbjct: 203 KMPIKWMALECI--HYRKFTHQSDVWSYGVTIWELM 236
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+T K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 82 IVTEYMSKGSLLDFL-KGETGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 134
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 135 AANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRFTIKSD 190
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 191 VWSFGILLTELT 202
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+T K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 255 IVTEYMSKGSLLDFL-KGETGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 307
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRFTIKSD 363
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 364 VWSFGILLTELT 375
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+T K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 255 IVTEYMSKGSLLDFL-KGETGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 307
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRFTIKSD 363
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 364 VWSFGILLTELT 375
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 44/242 (18%)
Query: 187 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
+ SH +V L G CLE L+ EFM +G L ++ E + + + +
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDV 113
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
+G+ YL C ++H D+ N L+ ++ K+SDFG+ + + +S G +
Sbjct: 114 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFP 168
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL-----VGCKNNLDSGV--DNSS--EVYF 357
+ + + EVFS F S KSDV+SFG+++ E+ + +N +S V D S+ +Y
Sbjct: 169 VKWASPEVFS--FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 226
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGST 417
P HV Q + C + RP DRP + ++ L
Sbjct: 227 PRLASTHVYQ-----------------------IMNHCWRERPEDRPAFSRLLRQLAEIA 263
Query: 418 EA 419
E+
Sbjct: 264 ES 265
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L G G ++ E+M NGSL+ F+ D ++ ++ G+ G
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM-----QLVGMLRGVGAG 163
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
+ YL +H D+ N+L+D + K+SDFGL+++ + G + I +
Sbjct: 164 MRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRW 220
Query: 310 IALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
A E + F S SDV+SFG+++ E++
Sbjct: 221 TAPEAIA--FRTFSSASDVWSFGVVMWEVLA 249
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+T K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 255 IVGEYMSKGSLLDFL-KGETGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 307
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRFTIKSD 363
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 364 VWSFGILLTELT 375
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYM 121
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 122 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAG 176
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 177 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 227
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 228 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYM 121
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T + G
Sbjct: 122 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA--G 176
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 177 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 227
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 228 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV----LLYM 116
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 117 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAG 171
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 172 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 222
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 223 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYM 116
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 117 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAG 171
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 172 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 222
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 223 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYM 116
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 117 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAG 171
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 172 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 222
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 223 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV----LLYM 116
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 117 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAG 171
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 172 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 222
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 223 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV----LLYM 121
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 122 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAG 176
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 177 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 227
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 228 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYM 116
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 117 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAG 171
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 172 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 222
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 223 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+T K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 86 IVTEYMNKGSLLDFL-KGETGK---YLRLPQLVDMSAQIASGMAYVER---MNYVHRDLR 138
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + GA+ I + A E + +G + KSD
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNEWTARQ--GAKFPIKWTAPE--AALYGRFTIKSD 194
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 195 VWSFGILLTELT 206
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+T K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 86 IVTEYMNKGSLLDFL-KGETGK---YLRLPQLVDMSAQIASGMAYVER---MNYVHRDLR 138
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRFTIKSD 194
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 195 VWSFGILLTELT 206
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYM 121
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 122 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAG 176
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 177 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 227
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 228 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 84/156 (53%), Gaps = 11/156 (7%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ +T HVN++ +G+ + A++ ++ SL ++ +T +K+ +I
Sbjct: 62 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHASETK-----FEMKKLIDIAR 115
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
A+G++YLH + I+H D+K +NI L +D KI DFGLA + + G
Sbjct: 116 QTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSG-SHQFEQLS 171
Query: 305 GTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELV 339
G+I ++A EV ++ S +SDVY+FG+++ EL+
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYM 120
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 121 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAG 175
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 176 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 226
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 227 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 271
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L G G ++ E+M NGSL+ F+ D ++ ++ G+ G
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM-----QLVGMLRGVGAG 163
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
+ YL +H D+ N+L+D + K+SDFGL+++ + G + I +
Sbjct: 164 MRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW 220
Query: 310 IALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
A E + F S SDV+SFG+++ E++
Sbjct: 221 TAPEAIA--FRTFSSASDVWSFGVVMWEVLA 249
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYM 116
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 117 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAG 171
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 172 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 222
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 223 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV----LLYM 117
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T + G
Sbjct: 118 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA--G 172
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 173 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 223
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 224 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 268
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I E+M NGSL F+ K L K+ ++ IA+G+ ++ +H D++
Sbjct: 93 IITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 145
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA+L + GA+ I + A E N+G + KSD
Sbjct: 146 AANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTAPEAI--NYGTFTIKSD 201
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ E+V G+ N + YR V D E+ +
Sbjct: 202 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD----------NCPEELYQL 251
Query: 388 MIIVGLWCIQARPYDRPP---MNEVIEMLQGSTEALQIPPTP 426
M + C + RP DRP + V+E +TE Q P P
Sbjct: 252 MRL----CWKERPEDRPTFDYLRSVLEDFFTATEG-QFQPQP 288
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYM 118
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 119 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAPAG 173
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 174 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 224
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 225 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYM 121
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 122 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAG 176
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 177 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 227
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 228 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 180 DGLASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTS-KPCQYLRWEK 238
D + +I H ++V LLG C G++ L+ +++P GSL V + P L W
Sbjct: 82 DHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG- 139
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT-TKKGIV 297
+ IAKG+ YL ++H ++ N+LL +++DFG+A L K ++
Sbjct: 140 -----VQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 191
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
S A+ I ++ALE S +FG+ +H+SDV+S+G+ + EL+
Sbjct: 192 YS--EAKTPIKWMALE--SIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 79 HVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGM 131
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 132 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 187
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 188 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 237
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 238 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 271
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 25/197 (12%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I EFM GSL F+ + + SK Q L K+ + IA+G+ ++ + +H D++
Sbjct: 86 IITEFMAKGSLLDFLKSDEGSK--QPL--PKLIDFSAQIAEGMAFIEQ---RNYIHRDLR 138
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA++ + ++ GA+ I + A E NFG + KSD
Sbjct: 139 AANILVSASLVCKIADFGLARVIEDNE--YTAREGAKFPIKWTAPEAI--NFGSFTIKSD 194
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ME+V G+ N + R +E+ G + ++
Sbjct: 195 VWSFGILLMEIVTYGRIPYPGMSNPE-------VIRALER-------GYRMPRPENCPEE 240
Query: 388 MIIVGLWCIQARPYDRP 404
+ + + C + RP +RP
Sbjct: 241 LYNIMMRCWKNRPEERP 257
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 18/163 (11%)
Query: 180 DGLASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTS-KPCQYLRWEK 238
D + +I H ++V LLG C G++ L+ +++P GSL V + P L W
Sbjct: 64 DHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG- 121
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC--TTKKGI 296
+ IAKG+ YL ++H ++ N+LL +++DFG+A L K+ +
Sbjct: 122 -----VQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 173
Query: 297 VSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
S A+ I ++ALE S +FG+ +H+SDV+S+G+ + EL+
Sbjct: 174 YSE---AKTPIKWMALE--SIHFGKYTHQSDVWSYGVTVWELM 211
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 10/151 (6%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
SH N++ L G + +I E+M NG+L+KF+ D ++ ++ GIA
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL-----QLVGMLRGIAA 158
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
G++YL + +H D+ NIL++ + K+SDFGL+++ + G + I
Sbjct: 159 GMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR 215
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ A E S + + + SDV+SFG+++ E++
Sbjct: 216 WTAPEAIS--YRKFTSASDVWSFGIVMWEVM 244
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYM 118
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 119 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAG 173
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 174 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 224
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 225 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 269
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYM 118
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 119 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAG 173
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 174 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 224
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 225 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 269
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYM 117
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 118 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAPAG 172
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 173 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 223
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEV 409
+E+D + +K E+ + C Q P DRP E+
Sbjct: 224 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 263
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 78 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 131 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 186
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 187 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 236
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 237 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 270
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 78 HVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 131 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 186
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 187 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 236
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 237 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 270
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 74 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYM 129
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 130 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAG 184
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 185 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 235
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEV 409
+E+D + +K E+ + C Q P DRP E+
Sbjct: 236 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 275
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 79 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 131
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 132 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 187
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 188 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 237
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 238 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 271
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 87/161 (54%), Gaps = 18/161 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YNGDTSK-PCQYLRWEK 238
H N++TLLG C + +I E+ G+L +++ Y+ D ++ P + + ++
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A+G+EYL S + +H D+ N+L+ ++ KI+DFGLA+
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMEL 338
+ G R + ++A E +F R + +H+SDV+SFG+++ E+
Sbjct: 216 TTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 82 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 134
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 135 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 190
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 191 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 240
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 241 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 274
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 101/197 (51%), Gaps = 20/197 (10%)
Query: 184 SISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-NGDTSKPCQYLRWEKMYEI 242
++ + SH +V G C + ++ E++ NG L ++ +G +P Q L E+
Sbjct: 56 TMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL------EM 109
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
+ +G+ +L S + +H D+ N L+D+D C K+SDFG+ + + + S +G
Sbjct: 110 CYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS--VG 164
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP---- 358
+ + + A EVF ++ + S KSDV++FG+++ E+ + + +SEV
Sbjct: 165 TKFPVKWSAPEVF--HYFKYSSKSDVWAFGILMWEVFSL-GKMPYDLYTNSEVVLKVSQG 221
Query: 359 HWIYR-HVEQDREFKLL 374
H +YR H+ D ++++
Sbjct: 222 HRLYRPHLASDTIYQIM 238
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I E+M NGSL F+ K L K+ ++ IA+G+ ++ +H D++
Sbjct: 84 IITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 136
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA+L + GA+ I + A E N+G + KSD
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDAEXTARE--GAKFPIKWTAPEAI--NYGTFTIKSD 192
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ E+V G+ N + YR V D E+ +
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD----------NCPEELYQL 242
Query: 388 MIIVGLWCIQARPYDRPP---MNEVIEMLQGSTEALQIPPTP 426
M + C + RP DRP + V+E +TE Q P P
Sbjct: 243 MRL----CWKERPEDRPTFDYLRSVLEDFFTATEG-QYQPQP 279
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 80 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 132
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 133 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 188
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 189 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 238
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 239 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 272
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 89 IVIEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNE--XTARQGAKFPIKWTAPE--AALYGRFTIKSD 197
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 198 VWSFGILLTELT 209
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H NV+ L G + +I EFM NGSL+ F+ D ++ ++ GIA G
Sbjct: 93 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-----FTVIQLVGMLRGIAAG 147
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSLLGARGTI 307
++YL +H D+ NIL++ + K+SDFGL++ T +S LG + I
Sbjct: 148 MKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 204
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ A E + + + SDV+S+G+++ E++
Sbjct: 205 RWTAPEAI--QYRKFTSASDVWSYGIVMWEVM 234
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 78 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 131 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 186
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 187 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 236
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 237 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 270
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I E+M NGSL F+ K L K+ ++ IA+G+ ++ +H D++
Sbjct: 84 IITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 136
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA+L + GA+ I + A E N+G + KSD
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTAPEAI--NYGTFTIKSD 192
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ E+V G+ N + YR V D E+ +
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD----------NCPEELYQL 242
Query: 388 MIIVGLWCIQARPYDRPP---MNEVIEMLQGSTEALQIPPTP 426
M + C + RP DRP + V+E +TE Q P P
Sbjct: 243 MRL----CWKERPEDRPTFDYLRSVLEDFFTATEG-QYQPQP 279
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 85 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 137
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 138 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 193
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 194 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 243
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 244 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 277
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 81 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 133
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 134 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 189
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 190 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 239
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 240 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 273
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I E+M NGSL F+ K L K+ ++ IA+G+ ++ +H D++
Sbjct: 92 IITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 144
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA+L + GA+ I + A E N+G + KSD
Sbjct: 145 AANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTAPEAI--NYGTFTIKSD 200
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ E+V G+ N + YR V D E+ +
Sbjct: 201 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD----------NCPEELYQL 250
Query: 388 MIIVGLWCIQARPYDRPP---MNEVIEMLQGSTEALQIPPTP 426
M + C + RP DRP + V+E +TE Q P P
Sbjct: 251 MRL----CWKERPEDRPTFDYLRSVLEDFFTATEG-QYQPQP 287
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I E+M NGSL F+ K L K+ ++ IA+G+ ++ +H D++
Sbjct: 90 IITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 142
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA+L + GA+ I + A E N+G + KSD
Sbjct: 143 AANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTAPEAI--NYGTFTIKSD 198
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ E+V G+ N + YR V D E+ +
Sbjct: 199 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD----------NCPEELYQL 248
Query: 388 MIIVGLWCIQARPYDRPP---MNEVIEMLQGSTEALQIPPTP 426
M + C + RP DRP + V+E +TE Q P P
Sbjct: 249 MRL----CWKERPEDRPTFDYLRSVLEDFFTATEG-QYQPQP 285
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 78 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 131 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 186
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 187 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 236
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 237 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 270
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 84 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 136
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 137 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 192
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 193 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 242
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 243 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 276
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 112 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 164
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 165 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 220
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 221 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 270
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 271 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 304
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 80 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 132
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 133 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 188
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 189 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 238
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 239 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 272
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 103 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 155
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 156 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 211
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 212 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 261
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 262 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 295
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 78 IVTEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 130
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 131 AANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRFTIKSD 186
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 187 VWSFGILLTELT 198
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 89 IVTEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRFTIKSD 197
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 198 VWSFGILLTELT 209
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 85 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 137
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 138 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 193
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 194 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 243
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 244 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 277
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I EFM GSL F+ + + SK Q L K+ + IA+G+ ++ + +H D++
Sbjct: 259 IITEFMAKGSLLDFLKSDEGSK--QPL--PKLIDFSAQIAEGMAFIEQ---RNYIHRDLR 311
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA++ + ++ GA+ I + A E NFG + KSD
Sbjct: 312 AANILVSASLVCKIADFGLARVIEDNE--YTAREGAKFPIKWTAPEAI--NFGSFTIKSD 367
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ME+V G+ N + R +E+ G + ++
Sbjct: 368 VWSFGILLMEIVTYGRIPYPGMSNPE-------VIRALER-------GYRMPRPENCPEE 413
Query: 388 MIIVGLWCIQARPYDRPPMNEVIEML 413
+ + + C + RP +RP + +L
Sbjct: 414 LYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 80 IVTEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 132
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 133 AANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRFTIKSD 188
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 189 VWSFGILLTELT 200
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 81 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 133
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 134 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 189
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 190 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 239
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 240 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 273
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 89 IVTEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRFTIKSD 197
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 198 VWSFGILLTELT 209
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 81 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 133
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 134 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 189
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 190 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 239
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 240 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 273
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 89 IVIEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRFTIKSD 197
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 198 VWSFGILLTELT 209
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 106/240 (44%), Gaps = 32/240 (13%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSL--------EKFVYNGDTSKPCQYLRWEKMY 240
H+NVV LLG C + G +I EF G+L +FV D K +L E +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK--DFLTLEHLI 147
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V
Sbjct: 148 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK- 203
Query: 301 LGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPH 359
AR + ++A E +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 204 GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----- 255
Query: 360 WIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTEA 419
R +++ G + + +M L C P RP +E++E L +A
Sbjct: 256 -FXRRLKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 307
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 85 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 137
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 138 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 193
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 194 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 243
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 244 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 277
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 44/236 (18%)
Query: 187 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
+ SH +V L G CLE L++EFM +G L ++ E + + + +
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDV 112
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
+G+ YL ++H D+ N L+ ++ K+SDFG+ + + +S G +
Sbjct: 113 CEGMAYLEEAS---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFP 167
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL-----VGCKNNLDSGV----DNSSEVYF 357
+ + + EVFS F S KSDV+SFG+++ E+ + +N +S V +Y
Sbjct: 168 VKWASPEVFS--FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 225
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEML 413
P HV Q + C + RP DRP + ++ L
Sbjct: 226 PRLASTHVYQ-----------------------IMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I E+M NGSL F+ K L K+ ++ IA+G+ ++ +H D++
Sbjct: 94 IITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 146
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA+L + ++ GA+ I + A E N+G + KSD
Sbjct: 147 AANILVSDTLSCKIADFGLARLIEDNE--YTAREGAKFPIKWTAPEAI--NYGTFTIKSD 202
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ E+V G+ N + YR V D E+ +
Sbjct: 203 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD----------NCPEELYQL 252
Query: 388 MIIVGLWCIQARPYDRPP---MNEVIEMLQGSTEALQIPPTP 426
M + C + RP DRP + V+E +TE Q P P
Sbjct: 253 MRL----CWKERPEDRPTFDYLRSVLEDFFTATEG-QYQPQP 289
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 88 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 140
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 141 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 196
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELV 339
ALE + R + +H+SDV+S+G+ + EL+
Sbjct: 197 ALESILHRIY---THQSDVWSYGVTVWELM 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 72 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 124
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 125 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 180
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 181 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 230
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 231 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 264
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 83/156 (53%), Gaps = 11/156 (7%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ +T HVN++ +G+ + A++ ++ SL ++ +T +K+ +I
Sbjct: 74 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHASETK-----FEMKKLIDIAR 127
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
A+G++YLH + I+H D+K +NI L +D KI DFGLA + G
Sbjct: 128 QTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLS 183
Query: 305 GTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELV 339
G+I ++A EV ++ S +SDVY+FG+++ EL+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 219
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 78 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 131 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 186
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELV 339
ALE + R + +H+SDV+S+G+ + EL+
Sbjct: 187 ALESILHRIY---THQSDVWSYGVTVWELM 213
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ +T HVN++ +G+ A++ ++ SL ++ +T +K+ +I
Sbjct: 74 LRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETK-----FEMKKLIDIAR 127
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
A+G++YLH + I+H D+K +NI L +D KI DFGLA + G
Sbjct: 128 QTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLS 183
Query: 305 GTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELV 339
G+I ++A EV ++ S +SDVY+FG+++ EL+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 219
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 81 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 133
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 134 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 189
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELV 339
ALE + R + +H+SDV+S+G+ + EL+
Sbjct: 190 ALESILHRIY---THQSDVWSYGVTVWELM 216
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 89 IVCEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRFTIKSD 197
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 198 VWSFGILLTELT 209
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 86/161 (53%), Gaps = 18/161 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YNGDTSK-PCQYLRWEK 238
H N++ LLG C + +I E+ G+L +++ Y+ D ++ P + + ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A+G+EYL S + +H D+ N+L+ ++ KI+DFGLA+
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMEL 338
+ G R + ++A E +F R + +H+SDV+SFG+++ E+
Sbjct: 216 TTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I E+M NGSL F+ K L K+ ++ IA+G+ ++ +H D++
Sbjct: 86 IITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 138
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA+L + GA+ I + A E N+G + KSD
Sbjct: 139 AANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTAPEAI--NYGTFTIKSD 194
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ E+V G+ N + YR V D E+ +
Sbjct: 195 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD----------NCPEELYQL 244
Query: 388 MIIVGLWCIQARPYDRPPMNEVIEMLQ 414
M + C + RP DRP + + +L+
Sbjct: 245 MRL----CWKERPEDRPTFDYLRSVLE 267
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 30/240 (12%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTS----KP----CQYLRWEKMY 240
H+NVV LLG C + G +I EF G+L ++ + KP +L E +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V
Sbjct: 152 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK- 207
Query: 301 LGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPH 359
AR + ++A E +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 208 GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----- 259
Query: 360 WIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTEA 419
R +++ G + + +M L C P RP +E++E L +A
Sbjct: 260 -FCRRLKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 268 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYM 323
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H ++ N L+ ++ K++DFGL++L T ++ G
Sbjct: 324 ATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAG 378
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 379 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 429
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 430 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 474
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I E+M NGSL F+ K L K+ ++ IA+G+ ++ +H D++
Sbjct: 84 IITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 136
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA+L + GA+ I + A E N+G + KSD
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTAPEAI--NYGTFTIKSD 192
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ E+V G+ N + YR V D E+ +
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD----------NCPEELYQL 242
Query: 388 MIIVGLWCIQARPYDRPPMNEVIEMLQ 414
M + C + RP DRP + + +L+
Sbjct: 243 MRL----CWKERPEDRPTFDYLRSVLE 265
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 38/239 (15%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-----------YNGDTSKPCQYLRWE 237
H N++ LLG C + +I E+ G+L +++ YN + P + L +
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN-PSHNPEEQLSSK 139
Query: 238 KMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIV 297
+ +A+G+EYL S + +H D+ N+L+ +D KI+DFGLA+
Sbjct: 140 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196
Query: 298 SSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
+ G R + ++A E +F R + +H+SDV+SFG+++ E+ +
Sbjct: 197 KTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGS------------ 240
Query: 357 FPHWIYRHVEQDREFKLL--GVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEML 413
Y V + FKLL G K + ++ ++ C A P RP +++E L
Sbjct: 241 ----PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 295
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 38/239 (15%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-----------YNGDTSKPCQYLRWE 237
H N++ LLG C + +I E+ G+L +++ YN + P + L +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN-PSHNPEEQLSSK 150
Query: 238 KMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIV 297
+ +A+G+EYL S + +H D+ N+L+ +D KI+DFGLA+
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 298 SSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
+ G R + ++A E +F R + +H+SDV+SFG+++ E+ +
Sbjct: 208 KTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGS------------ 251
Query: 357 FPHWIYRHVEQDREFKLL--GVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEML 413
Y V + FKLL G K + ++ ++ C A P RP +++E L
Sbjct: 252 ----PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 38/239 (15%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-----------YNGDTSKPCQYLRWE 237
H N++ LLG C + +I E+ G+L +++ YN + P + L +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN-PSHNPEEQLSSK 150
Query: 238 KMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIV 297
+ +A+G+EYL S + +H D+ N+L+ +D KI+DFGLA+
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 298 SSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
+ G R + ++A E +F R + +H+SDV+SFG+++ E+ +
Sbjct: 208 KTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGS------------ 251
Query: 357 FPHWIYRHVEQDREFKLL--GVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEML 413
Y V + FKLL G K + ++ ++ C A P RP +++E L
Sbjct: 252 ----PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 38/239 (15%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-----------YNGDTSKPCQYLRWE 237
H N++ LLG C + +I E+ G+L +++ YN + P + L +
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN-PSHNPEEQLSSK 142
Query: 238 KMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIV 297
+ +A+G+EYL S + +H D+ N+L+ +D KI+DFGLA+
Sbjct: 143 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199
Query: 298 SSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
+ G R + ++A E +F R + +H+SDV+SFG+++ E+ +
Sbjct: 200 KTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGS------------ 243
Query: 357 FPHWIYRHVEQDREFKLL--GVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEML 413
Y V + FKLL G K + ++ ++ C A P RP +++E L
Sbjct: 244 ----PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 298
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I E+M NGSL F+ K L K+ ++ IA+G+ ++ +H D++
Sbjct: 85 IITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 137
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA+L + GA+ I + A E N+G + KSD
Sbjct: 138 AANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTAPEAI--NYGTFTIKSD 193
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ E+V G+ N + YR V D E+ +
Sbjct: 194 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD----------NCPEELYQL 243
Query: 388 MIIVGLWCIQARPYDRPPMNEVIEMLQ 414
M + C + RP DRP + + +L+
Sbjct: 244 MRL----CWKERPEDRPTFDYLRSVLE 266
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ + SH N+V L+G C + ++ E + G F+ LR + + ++V
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-----LRVKTLLQMVG 220
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
A G+EYL C +H D+ N L+ + KISDFG+++ G+ ++ G R
Sbjct: 221 DAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVXAASGGLR 275
Query: 305 GT-IGYIALEVFSRNFGEVSHKSDVYSFGMMIME 337
+ + A E N+G S +SDV+SFG+++ E
Sbjct: 276 QVPVKWTAPEAL--NYGRYSSESDVWSFGILLWE 307
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 87/161 (54%), Gaps = 18/161 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YNGDTSK-PCQYLRWEK 238
H N++ LLG C + +I E+ G+L +++ Y+ D ++ P + + ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A+G+EYL S + +H D+ N+L+ ++ KI+DFGLA+ +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMEL 338
+ G R + ++A E +F R + +H+SDV+SFG+++ E+
Sbjct: 216 TTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 38/239 (15%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-----------YNGDTSKPCQYLRWE 237
H N++ LLG C + +I E+ G+L +++ YN + P + L +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYN-PSHNPEEQLSSK 150
Query: 238 KMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIV 297
+ +A+G+EYL S + +H D+ N+L+ +D KI+DFGLA+
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 298 SSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
+ G R + ++A E +F R + +H+SDV+SFG+++ E+ +
Sbjct: 208 KTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGS------------ 251
Query: 357 FPHWIYRHVEQDREFKLL--GVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEML 413
Y V + FKLL G K + ++ ++ C A P RP +++E L
Sbjct: 252 ----PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 110/239 (46%), Gaps = 38/239 (15%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-----------YNGDTSKPCQYLRWE 237
H N++ LLG C + +I E+ G+L +++ YN + P + L +
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN-PSHNPEEQLSSK 135
Query: 238 KMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIV 297
+ +A+G+EYL S + +H D+ N+L+ +D KI+DFGLA+
Sbjct: 136 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
Query: 298 SSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
+ G R + ++A E +F R + +H+SDV+SFG+++ E+ + GV
Sbjct: 193 KTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVP------ 242
Query: 357 FPHWIYRHVEQDREFKLL--GVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEML 413
VE+ FKLL G K + ++ ++ C A P RP +++E L
Sbjct: 243 --------VEE--LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ + H NVV L G G ++ EFM NG+L+ F+ D ++ ++
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-----FTVIQLVGMLR 152
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
GIA G+ YL +H D+ NIL++ + K+SDFGL+++ V + G +
Sbjct: 153 GIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK 209
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ + A E + + + SDV+S+G+++ E++
Sbjct: 210 IPVRWTAPEAI--QYRKFTSASDVWSYGIVMWEVM 242
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 38/239 (15%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-----------YNGDTSKPCQYLRWE 237
H N++ LLG C + +I E+ G+L +++ YN + P + L +
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN-PSHNPEEQLSSK 143
Query: 238 KMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIV 297
+ +A+G+EYL S + +H D+ N+L+ +D KI+DFGLA+
Sbjct: 144 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200
Query: 298 SSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
+ G R + ++A E +F R + +H+SDV+SFG+++ E+ +
Sbjct: 201 KTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGS------------ 244
Query: 357 FPHWIYRHVEQDREFKLL--GVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEML 413
Y V + FKLL G K + ++ ++ C A P RP +++E L
Sbjct: 245 ----PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 299
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ +T HVN++ +G+ + A++ ++ SL ++ +T K+ +I
Sbjct: 58 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIAR 111
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
A+G++YLH + I+H D+K +NI L +D KI DFGLA + + G
Sbjct: 112 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLS 167
Query: 305 GTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
G+I ++A EV ++ S +SDVY+FG+++ EL+ + S ++N ++ F
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIF 220
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 86/161 (53%), Gaps = 18/161 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YNGDTSK-PCQYLRWEK 238
H N++ LLG C + +I E+ G+L +++ Y+ D ++ P + + ++
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A+G+EYL S + +H D+ N+L+ ++ KI+DFGLA+
Sbjct: 205 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMEL 338
+ G R + ++A E +F R + +H+SDV+SFG+++ E+
Sbjct: 262 TTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 298
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ +T HVN++ +G+ + A++ ++ SL ++ +T K+ +I
Sbjct: 60 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIAR 113
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
A+G++YLH + I+H D+K +NI L +D KI DFGLA + + G
Sbjct: 114 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLS 169
Query: 305 GTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
G+I ++A EV ++ S +SDVY+FG+++ EL+ + S ++N ++ F
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIF 222
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 36/238 (15%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN----------GDTSKPCQYLRWEK 238
H N++ LLG C + +I E+ G+L +++ + P + L +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A+G+EYL S + +H D+ N+L+ +D KI+DFGLA+
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
+ G R + ++A E +F R + +H+SDV+SFG+++ E+ +
Sbjct: 209 TTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGS------------- 251
Query: 358 PHWIYRHVEQDREFKLL--GVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEML 413
Y V + FKLL G K + ++ ++ C A P RP +++E L
Sbjct: 252 ---PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ R +H D+
Sbjct: 89 IVTEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLA 141
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRFTIKSD 197
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 198 VWSFGILLTELT 209
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 12/174 (6%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ +T HVN++ +G+ A++ ++ SL ++ +T K+ +I
Sbjct: 58 LRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIAR 111
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
A+G++YLH + I+H D+K +NI L +D KI DFGLA + + G
Sbjct: 112 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLS 167
Query: 305 GTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
G+I ++A EV ++ S +SDVY+FG+++ EL+ + S ++N ++ F
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIF 220
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ +T HVN++ +G+ + A++ ++ SL ++ +T K+ +I
Sbjct: 63 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIAR 116
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
A+G++YLH + I+H D+K +NI L +D KI DFGLA + + G
Sbjct: 117 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLS 172
Query: 305 GTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
G+I ++A EV ++ S +SDVY+FG+++ EL+ + S ++N ++ F
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIF 225
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ +T HVN++ +G+ + A++ ++ SL ++ +T K+ +I
Sbjct: 63 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIAR 116
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
A+G++YLH + I+H D+K +NI L +D KI DFGLA + + G
Sbjct: 117 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLS 172
Query: 305 GTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
G+I ++A EV ++ S +SDVY+FG+++ EL+ + S ++N ++ F
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIF 225
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I E+M NGSL F+ K L K+ ++ IA+G+ ++ +H D++
Sbjct: 79 IITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 131
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA+L + ++ GA+ I + A E N+G + KSD
Sbjct: 132 AANILVSDTLSCKIADFGLARLIEDNE--YTAREGAKFPIKWTAPEAI--NYGTFTIKSD 187
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ E+V G+ N + YR V D E+ +
Sbjct: 188 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD----------NCPEELYQL 237
Query: 388 MIIVGLWCIQARPYDRPPMNEVIEMLQ 414
M + C + RP DRP + + +L+
Sbjct: 238 MRL----CWKERPEDRPTFDYLRSVLE 260
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I E+M NGSL F+ K L K+ ++ IA+G+ ++ +H D++
Sbjct: 84 IITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 136
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA+L + ++ GA+ I + A E N+G + KSD
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNE--YTAREGAKFPIKWTAPEAI--NYGTFTIKSD 192
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ E+V G+ N + YR V D E+ +
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD----------NCPEELYQL 242
Query: 388 MIIVGLWCIQARPYDRPPMNEVIEMLQ 414
M + C + RP DRP + + +L+
Sbjct: 243 MRL----CWKERPEDRPTFDYLRSVLE 265
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ + SH N+V L+G C + ++ E + G F+ LR + + ++V
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-----LRVKTLLQMVG 220
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
A G+EYL C +H D+ N L+ + KISDFG+++ G+ ++ G R
Sbjct: 221 DAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLR 275
Query: 305 GT-IGYIALEVFSRNFGEVSHKSDVYSFGMMIME 337
+ + A E N+G S +SDV+SFG+++ E
Sbjct: 276 QVPVKWTAPEAL--NYGRYSSESDVWSFGILLWE 307
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 190 HVNVVTLLGFCLE--GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
H N+V G C E GN LI EF+P+GSL++++ K + ++ + + I
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-----PKNKNKINLKQQLKYAVQIC 136
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
KG++YL S + +H D+ N+L++ + KI DFGL K T K + +
Sbjct: 137 KGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 193
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ A E ++ ++ SDV+SFG+ + EL+
Sbjct: 194 FWYAPECLMQSKFYIA--SDVWSFGVTLHELL 223
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I E+M NGSL F+ K L K+ ++ IA+G+ ++ +H D++
Sbjct: 90 IITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 142
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA+L + ++ GA+ I + A E N+G + KSD
Sbjct: 143 AANILVSDTLSCKIADFGLARLIEDNE--YTAREGAKFPIKWTAPEAI--NYGTFTIKSD 198
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ E+V G+ N + YR V D E+ +
Sbjct: 199 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD----------NCPEELYQL 248
Query: 388 MIIVGLWCIQARPYDRPPMNEVIEMLQ 414
M + C + RP DRP + + +L+
Sbjct: 249 MRL----CWKERPEDRPTFDYLRSVLE 271
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 38/239 (15%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-----------YNGDTSKPCQYLRWE 237
H N++ LLG C + +I E+ G+L +++ YN + P + L +
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN-PSHNPEEQLSSK 191
Query: 238 KMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIV 297
+ +A+G+EYL S + +H D+ N+L+ +D KI+DFGLA+
Sbjct: 192 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
Query: 298 SSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
+ G R + ++A E +F R + +H+SDV+SFG+++ E+ +
Sbjct: 249 KTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGS------------ 292
Query: 357 FPHWIYRHVEQDREFKLL--GVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEML 413
Y V + FKLL G K + ++ ++ C A P RP +++E L
Sbjct: 293 ----PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 36/242 (14%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG--- 245
H+NVV LLG C + G +I EF G+L ++ SK +++ ++ +Y+ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL----RSKRNEFVPYKDLYKDFLTLEH 145
Query: 246 -------IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V
Sbjct: 146 LICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 202
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
AR + ++A E +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 203 K-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--- 255
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGST 417
R +++ G + + +M L C P RP +E++E L
Sbjct: 256 ---FCRRLKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 305
Query: 418 EA 419
+A
Sbjct: 306 QA 307
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IA+G+
Sbjct: 75 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGM 127
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFGLAKL ++ + G + I ++
Sbjct: 128 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWM 183
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 184 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 233
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 234 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 267
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I E+M NGSL F+ K L K+ ++ IA+G+ ++ +H D++
Sbjct: 89 IITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 141
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA+L + ++ GA+ I + A E N+G + KSD
Sbjct: 142 AANILVSDTLSCKIADFGLARLIEDNE--YTAREGAKFPIKWTAPEAI--NYGTFTIKSD 197
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ E+V G+ N + YR V D E+ +
Sbjct: 198 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD----------NCPEELYQL 247
Query: 388 MIIVGLWCIQARPYDRPPMNEVIEMLQ 414
M + C + RP DRP + + +L+
Sbjct: 248 MRL----CWKERPEDRPTFDYLRSVLE 270
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ +T HVN++ +G+ + A++ ++ SL ++ +T K+ +I
Sbjct: 85 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIAR 138
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
A+G++YLH + I+H D+K +NI L +D KI DFGLA + + G
Sbjct: 139 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLS 194
Query: 305 GTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
G+I ++A EV ++ S +SDVY+FG+++ EL+ + S ++N ++ F
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIF 247
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 86/161 (53%), Gaps = 18/161 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YNGDTSK-PCQYLRWEK 238
H N++ LLG C + +I E+ G+L +++ Y+ D ++ P + + ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A+G+EYL S + +H D+ N+L+ ++ KI+DFGLA+
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMEL 338
+ G R + ++A E +F R + +H+SDV+SFG+++ E+
Sbjct: 216 TTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ +T HVN++ +G+ + A++ ++ SL ++ +T K+ +I
Sbjct: 86 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIAR 139
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
A+G++YLH + I+H D+K +NI L +D KI DFGLA + + G
Sbjct: 140 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLS 195
Query: 305 GTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
G+I ++A EV ++ S +SDVY+FG+++ EL+ + S ++N ++ F
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIF 248
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 86/161 (53%), Gaps = 18/161 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YNGDTSK-PCQYLRWEK 238
H N++ LLG C + +I E+ G+L +++ Y+ D ++ P + + ++
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A+G+EYL S + +H D+ N+L+ ++ KI+DFGLA+
Sbjct: 146 LVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMEL 338
+ G R + ++A E +F R + +H+SDV+SFG+++ E+
Sbjct: 203 TTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 239
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 190 HVNVVTLLGFCLE--GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
H N+V G C E GN LI EF+P+GSL++++ K + ++ + + I
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-----PKNKNKINLKQQLKYAVQIC 124
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
KG++YL S + +H D+ N+L++ + KI DFGL K T K + +
Sbjct: 125 KGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 181
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ A E ++ ++ SDV+SFG+ + EL+
Sbjct: 182 FWYAPECLMQSKFYIA--SDVWSFGVTLHELL 211
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 86/161 (53%), Gaps = 18/161 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YNGDTSK-PCQYLRWEK 238
H N++ LLG C + +I E+ G+L +++ Y+ D ++ P + + ++
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A+G+EYL S + +H D+ N+L+ ++ KI+DFGLA+
Sbjct: 151 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMEL 338
+ G R + ++A E +F R + +H+SDV+SFG+++ E+
Sbjct: 208 TTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 244
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 86/161 (53%), Gaps = 18/161 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YNGDTSK-PCQYLRWEK 238
H N++ LLG C + +I E+ G+L +++ Y+ D ++ P + + ++
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A+G+EYL S + +H D+ N+L+ ++ KI+DFGLA+
Sbjct: 148 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMEL 338
+ G R + ++A E +F R + +H+SDV+SFG+++ E+
Sbjct: 205 TTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 241
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 256 IVTEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 308
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGL +L + ++ GA+ I + A E + +G + KSD
Sbjct: 309 AANILVGENLVCKVADFGLGRLIEDNE--YTARQGAKFPIKWTAPE--AALYGRFTIKSD 364
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 365 VWSFGILLTELT 376
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 29/234 (12%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPC--QYLRWEKMY 240
A + H N+V LLG C +I EFM G+L ++ + C Q + +
Sbjct: 307 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL------RECNRQEVNAVVLL 360
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ I+ +EYL + +H ++ N L+ ++ K++DFGL++L T ++
Sbjct: 361 YMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAH 415
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHW 360
GA+ I + A E + N + S KSDV++FG+++ E+ + G+D S
Sbjct: 416 AGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------- 466
Query: 361 IYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+Y +E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 467 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 513
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRAL-----IYEFMPNGSLEKFVYNGDTSKPCQYLRWE 237
A + SH NV+ LLG C+E +++ + I FM G L ++ +++ +
Sbjct: 88 ACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ 147
Query: 238 KMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT----K 293
+ + ++ IA G+EYL + LH D+ N +L D ++DFGL+K + +
Sbjct: 148 TLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYR 204
Query: 294 KGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSS 353
+G + A+ + +IA+E + + KSDV++FG+ + E+ GV N
Sbjct: 205 QGRI-----AKMPVKWIAIESLADRV--YTSKSDVWAFGVTMWEIATRGMTPYPGVQN-- 255
Query: 354 EVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEML 413
H +Y ++ L G K+ + ++ + C + P DRP + + L
Sbjct: 256 -----HEMY-------DYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQL 303
Query: 414 QGSTEAL 420
+ E+L
Sbjct: 304 EKLLESL 310
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 82 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 134
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFG AKL ++ + G + I ++
Sbjct: 135 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWM 190
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 191 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 240
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 241 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 274
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M G L F+ G+ K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 89 IVMEYMSKGCLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRFTIKSD 197
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 198 VWSFGILLTELT 209
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 265 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYM 320
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H ++ N L+ ++ K++DFGL++L T ++ G
Sbjct: 321 ATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAG 375
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
A+ I + A E + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 376 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 426
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+E+D + +K E+ + C Q P DRP E+ + +
Sbjct: 427 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 471
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 80 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 132
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFG AKL ++ + G + I ++
Sbjct: 133 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWM 188
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 189 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 238
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 239 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 272
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 35/206 (16%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I EFM GSL F+ + + SK Q L K+ + IA+G+ ++ + +H D++
Sbjct: 253 IITEFMAKGSLLDFLKSDEGSK--QPL--PKLIDFSAQIAEGMAFIEQ---RNYIHRDLR 305
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA++ GA+ I + A E NFG + KSD
Sbjct: 306 AANILVSASLVCKIADFGLARV------------GAKFPIKWTAPEAI--NFGSFTIKSD 351
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ME+V G+ N + R +E+ G + ++
Sbjct: 352 VWSFGILLMEIVTYGRIPYPGMSNPE-------VIRALER-------GYRMPRPENCPEE 397
Query: 388 MIIVGLWCIQARPYDRPPMNEVIEML 413
+ + + C + RP +RP + +L
Sbjct: 398 LYNIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M G L F+ G+ K YLR ++ ++ IA G+ Y+ R +H D++
Sbjct: 89 IVTEYMSKGCLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ ++ K++DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRFTIKSD 197
Query: 328 VYSFGMMIMELV 339
V+SFG+++ EL
Sbjct: 198 VWSFGILLTELT 209
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 181 GLASI-SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
G ASI + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 72 GEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI-----QL 126
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ GI+ G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 127 VGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 183
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G + I + A E + F + + SDV+S+G+++ E+V
Sbjct: 184 TRGGKIPIRWTAPEAIA--FRKFTSASDVWSYGIVMWEVV 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 78 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFG AKL ++ + G + I ++
Sbjct: 131 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWM 186
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 187 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 236
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 237 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 270
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 86/161 (53%), Gaps = 18/161 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YNGDTSK-PCQYLRWEK 238
H N++ LLG C + +I E+ G+L +++ Y+ D ++ P + + ++
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A+G+EYL S + +H D+ N+L+ ++ KI+DFGLA+
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMEL 338
+ G R + ++A E +F R + +H+SDV+SFG+++ E+
Sbjct: 216 TTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 86/161 (53%), Gaps = 18/161 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YNGDTSK-PCQYLRWEK 238
H N++ LLG C + +I E+ G+L +++ Y+ D ++ P + + ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A+G+EYL S + +H D+ N+L+ ++ +I+DFGLA+
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMEL 338
+ G R + ++A E +F R + +H+SDV+SFG+++ E+
Sbjct: 216 TTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 80 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 132
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFG AKL ++ + G + I ++
Sbjct: 133 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWM 188
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELV 339
ALE + R + +H+SDV+S+G+ + EL+
Sbjct: 189 ALESILHRIY---THQSDVWSYGVTVWELM 215
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 30/221 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 85 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 137
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFG AKL ++ + G + I ++
Sbjct: 138 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWM 193
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDR 369
ALE + R + +H+SDV+S+G+ + EL+ + G+ S I +E+
Sbjct: 194 ALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE 243
Query: 370 EFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+ T I MI+V W I A RP E+I
Sbjct: 244 RLPQPPICT-----IDVYMIMVKCWMIDAD--SRPKFRELI 277
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H NV+ L G + +I EFM NGSL+ F+ D ++ ++ GIA G
Sbjct: 67 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-----FTVIQLVGMLRGIAAG 121
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSLLGARGTI 307
++YL +H + NIL++ + K+SDFGL++ T +S LG + I
Sbjct: 122 MKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 178
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ A E + + + SDV+S+G+++ E++
Sbjct: 179 RWTAPEAI--QYRKFTSASDVWSYGIVMWEVM 208
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGL 250
+V LLG CL + LI + MP G L +V + QYL W + IAKG+
Sbjct: 80 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 132
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
YL R++H D+ N+L+ KI+DFG AKL ++ + G + I ++
Sbjct: 133 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWM 188
Query: 311 ALE-VFSRNFGEVSHKSDVYSFGMMIMELV 339
ALE + R + +H+SDV+S+G+ + EL+
Sbjct: 189 ALESILHRIY---THQSDVWSYGVTVWELM 215
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 183 ASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
A++ +T H +V L +I E+M GSL F+ + + K + K+ +
Sbjct: 59 ANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGK----VLLPKLID 114
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLL 301
IA+G+ Y+ R +H D++ N+L+ + KI+DFGLA++ + ++
Sbjct: 115 FSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE--YTARE 169
Query: 302 GARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
GA+ I + A E NFG + KSDV+SFG+++ E+V
Sbjct: 170 GAKFPIKWTAPEAI--NFGCFTIKSDVWSFGILLYEIV 205
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 12/174 (6%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ +T HVN++ +G+ + A++ ++ SL ++ +T K+ +I
Sbjct: 58 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIAR 111
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
A+G++YLH + I+H D+K +NI L +D KI DFGLA + G
Sbjct: 112 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLS 167
Query: 305 GTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
G+I ++A EV ++ S +SDVY+FG+++ EL+ + S ++N ++ F
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIF 220
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI EF+P GSL +++ K + + K+ + I
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL-----QKHKERIDHIKLLQYTSQI 126
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H D+ NIL++ + KI DFGL K+ K
Sbjct: 127 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 184 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 213
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 181 GLASI-SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
G ASI + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QL 149
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ GIA G++YL +H D+ NIL++ + K+SDFGLA++ +
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G + I + + E + + + + SDV+S+G+++ E++
Sbjct: 207 TRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 12/174 (6%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ +T HVN++ +G+ + A++ ++ SL ++ +T K+ +I
Sbjct: 78 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIAR 131
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
A+G++YLH + I+H D+K +NI L +D KI DFGLA + G
Sbjct: 132 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLS 187
Query: 305 GTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
G+I ++A EV ++ S +SDVY+FG+++ EL+ + S ++N ++ F
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIF 240
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
+I E+M NGSL F+ K L K+ ++ IA+G+ ++ +H +++
Sbjct: 80 IITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIE---ERNYIHRNLR 132
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA+L + ++ GA+ I + A E N+G + KSD
Sbjct: 133 AANILVSDTLSCKIADFGLARLIEDNE--YTAREGAKFPIKWTAPEAI--NYGTFTIKSD 188
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKK 387
V+SFG+++ E+V G+ N + YR V D E+ +
Sbjct: 189 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD----------NCPEELYQL 238
Query: 388 MIIVGLWCIQARPYDRPPMNEVIEMLQ 414
M + C + RP DRP + + +L+
Sbjct: 239 MRL----CWKERPEDRPTFDYLRSVLE 261
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 12/174 (6%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ +T HVN++ +G+ + A++ ++ SL ++ +T K+ +I
Sbjct: 86 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIAR 139
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
A+G++YLH + I+H D+K +NI L +D KI DFGLA + G
Sbjct: 140 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLS 195
Query: 305 GTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
G+I ++A EV ++ S +SDVY+FG+++ EL+ + S ++N ++ F
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIF 248
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 83/158 (52%), Gaps = 12/158 (7%)
Query: 183 ASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
A++ +T H +V L + +I EFM GSL F+ + + K + K+ +
Sbjct: 58 ANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGK----VLLPKLID 113
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLL 301
IA+G+ Y+ R +H D++ N+L+ + KI+DFGLA++ + ++
Sbjct: 114 FSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE--YTARE 168
Query: 302 GARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
GA+ I + A E NFG + KS+V+SFG+++ E+V
Sbjct: 169 GAKFPIKWTAPEAI--NFGCFTIKSNVWSFGILLYEIV 204
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 31/241 (12%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFV---------YNGDTSKPCQYLRWEKM 239
H+NVV LLG C + G +I EF G+L ++ Y +L E +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 300 LLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
AR + ++A E +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 208 -GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---- 259
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTE 418
R +++ G + + +M L C P RP +E++E L +
Sbjct: 260 --FCRRLKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 419 A 419
A
Sbjct: 311 A 311
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 23/167 (13%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H NV+ +G + I E++ G+L + + D+ P W + IA
Sbjct: 65 EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP-----WSQRVSFAKDIAS 119
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR---- 304
G+ YLH S I+H D+ HN L+ ++ ++DFGLA+L +K L +
Sbjct: 120 GMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 305 -------GTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELVGCKN 343
G ++A E+ + R++ E K DV+SFG+++ E++G N
Sbjct: 177 KKRYTVVGNPYWMAPEMINGRSYDE---KVDVFSFGIVLCEIIGRVN 220
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 19/160 (11%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGD----------TSKPCQYLRWEKM 239
H N++ LLG C L E+ P+G+L F+ + L +++
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
+A+G++YL + + +H D+ NIL+ +++ KI+DFGL++ ++ V
Sbjct: 135 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK 188
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+G R + ++A+E S N+ + SDV+S+G+++ E+V
Sbjct: 189 TMG-RLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 181 GLASI-SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
G ASI + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QL 149
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 150 VGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G + I + + E + + + + SDV+S+G+++ E++
Sbjct: 207 TRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 19/160 (11%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGD----------TSKPCQYLRWEKM 239
H N++ LLG C L E+ P+G+L F+ + L +++
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
+A+G++YL + + +H D+ NIL+ +++ KI+DFGL++ ++ V
Sbjct: 145 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK 198
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+G R + ++A+E S N+ + SDV+S+G+++ E+V
Sbjct: 199 TMG-RLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 85/161 (52%), Gaps = 18/161 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YNGDTSK-PCQYLRWEK 238
H N++ LLG C + +I E+ G+L +++ + D ++ P + + ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A+G+EYL S + +H D+ N+L+ ++ KI+DFGLA+
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMEL 338
+ G R + ++A E +F R + +H+SDV+SFG+++ E+
Sbjct: 216 TTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+M GSL F+ +G+ + L+ + ++ +A G+ Y+ R +H D++
Sbjct: 80 IVTEYMNKGSLLDFLKDGEG----RALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLR 132
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL+ KI+DFGLA+L + ++ GA+ I + A E + +G + KSD
Sbjct: 133 SANILVGNGLICKIADFGLARLIEDNE--XTARQGAKFPIKWTAPE--AALYGRFTIKSD 188
Query: 328 VYSFGMMIMELV 339
V+SFG+++ ELV
Sbjct: 189 VWSFGILLTELV 200
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 85/161 (52%), Gaps = 18/161 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YNGDTSK-PCQYLRWEK 238
H N++ LLG C + +I + G+L +++ Y+ D ++ P + + ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A+G+EYL S + +H D+ N+L+ ++ KI+DFGLA+
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMEL 338
+ G R + ++A E +F R + +H+SDV+SFG+++ E+
Sbjct: 216 TTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 181 GLASI-SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
G ASI + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 93 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QL 147
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 148 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G + I + + E + + + + SDV+S+G+++ E++
Sbjct: 205 TRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 242
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 181 GLASI-SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
G ASI + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QL 149
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G + I + + E + + + + SDV+S+G+++ E++
Sbjct: 207 TRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 181 GLASI-SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
G ASI + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QL 149
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G + I + + E + + + + SDV+S+G+++ E++
Sbjct: 207 TRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 181 GLASI-SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
G ASI + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QL 149
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G + I + + E + + + + SDV+S+G+++ E++
Sbjct: 207 TRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 181 GLASI-SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
G ASI + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QL 149
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G + I + + E + + + + SDV+S+G+++ E++
Sbjct: 207 TRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 181 GLASI-SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
G ASI + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QL 120
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 121 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G + I + + E + + + + SDV+S+G+++ E++
Sbjct: 178 TRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 181 GLASI-SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
G ASI + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 83 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QL 137
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 138 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G + I + + E + + + + SDV+S+G+++ E++
Sbjct: 195 TRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 232
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI E++P GSL ++ K + + K+ + I
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQI 123
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H D+ NIL++ + KI DFGL K+ K
Sbjct: 124 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP 180
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 181 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 210
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 181 GLASI-SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
G ASI + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QL 149
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ GIA G++YL +H D+ NIL++ + K+SDFGL ++ +
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G + I + + E + + + + SDV+S+G+++ E++
Sbjct: 207 TRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI E++P GSL ++ K + + K+ + I
Sbjct: 68 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQI 122
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H D+ NIL++ + KI DFGL K+ K
Sbjct: 123 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 179
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 180 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 209
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 85/161 (52%), Gaps = 18/161 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YNGDTSK-PCQYLRWEK 238
H N++ LLG C + +I + G+L +++ Y+ D ++ P + + ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A+G+EYL S + +H D+ N+L+ ++ KI+DFGLA+
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMEL 338
+ G R + ++A E +F R + +H+SDV+SFG+++ E+
Sbjct: 216 TTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI E++P GSL ++ K + + K+ + I
Sbjct: 76 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQI 130
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H D+ NIL++ + KI DFGL K+ K
Sbjct: 131 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 187
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 188 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI E++P GSL ++ K + + K+ + I
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQI 123
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H D+ NIL++ + KI DFGL K+ K
Sbjct: 124 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 181 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI E++P GSL ++ K + + K+ + I
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQI 123
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H D+ NIL++ + KI DFGL K+ K
Sbjct: 124 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 181 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI E++P GSL ++ K + + K+ + I
Sbjct: 67 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQI 121
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H D+ NIL++ + KI DFGL K+ K
Sbjct: 122 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 178
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 179 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 208
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI E++P GSL ++ K + + K+ + I
Sbjct: 73 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQI 127
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H D+ NIL++ + KI DFGL K+ K
Sbjct: 128 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 184
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 185 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 214
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI E++P GSL ++ K + + K+ + I
Sbjct: 74 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQI 128
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H D+ NIL++ + KI DFGL K+ K
Sbjct: 129 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 185
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 186 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI E++P GSL ++ K + + K+ + I
Sbjct: 100 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQI 154
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H D+ NIL++ + KI DFGL K+ K
Sbjct: 155 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 211
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 212 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 241
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI E++P GSL ++ K + + K+ + I
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQI 126
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H D+ NIL++ + KI DFGL K+ K
Sbjct: 127 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 184 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 213
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 32/242 (13%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG--- 245
H+NVV LLG C + G +I EF G+L ++ + + E +Y+ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 246 -------IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
AR + ++A E +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 207 K-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--- 259
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGST 417
R +++ G + + +M L C P RP +E++E L
Sbjct: 260 ---FCRRLKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
Query: 418 EA 419
+A
Sbjct: 310 QA 311
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI E++P GSL ++ K + + K+ + I
Sbjct: 75 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQI 129
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H D+ NIL++ + KI DFGL K+ K
Sbjct: 130 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 186
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 187 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 216
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI E++P GSL ++ K + + K+ + I
Sbjct: 87 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQI 141
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H D+ NIL++ + KI DFGL K+ K
Sbjct: 142 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 199 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 228
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI E++P GSL ++ K + + K+ + I
Sbjct: 87 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQI 141
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H D+ NIL++ + KI DFGL K+ K
Sbjct: 142 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 199 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 228
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 12/174 (6%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 242
A + H N+V LLG C ++ E+MP G+L ++ + + + + +
Sbjct: 80 AVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVV----LLYM 135
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I+ +EYL + +H D+ N L+ ++ K++DFGL++L T ++ G
Sbjct: 136 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGD--TYTAHAG 190
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
A+ I + A E + N S KSDV++FG+++ E+ + G+D S+VY
Sbjct: 191 AKFPIKWTAPESLAYN--TFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVY 241
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 32/242 (13%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG--- 245
H+NVV LLG C + G +I EF G+L ++ + + E +Y+ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 246 -------IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
AR + ++A E +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 198 K-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--- 250
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGST 417
R +++ G + + +M L C P RP +E++E L
Sbjct: 251 ---FCRRLKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
Query: 418 EA 419
+A
Sbjct: 301 QA 302
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 32/242 (13%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG--- 245
H+NVV LLG C + G +I EF G+L ++ + + E +Y+ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 246 -------IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
AR + ++A E +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 207 K-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--- 259
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGST 417
R +++ G + + +M L C P RP +E++E L
Sbjct: 260 ---FCRRLKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
Query: 418 EA 419
+A
Sbjct: 310 QA 311
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 32/242 (13%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG--- 245
H+NVV LLG C + G +I EF G+L ++ + + E +Y+ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 246 -------IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
AR + ++A E +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 207 K-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--- 259
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGST 417
R +++ G + + +M L C P RP +E++E L
Sbjct: 260 ---FCRRLKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
Query: 418 EA 419
+A
Sbjct: 310 QA 311
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 32/242 (13%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG--- 245
H+NVV LLG C + G +I EF G+L ++ + + E +Y+ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 246 -------IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
AR + ++A E +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 198 K-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--- 250
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGST 417
R +++ G + + +M L C P RP +E++E L
Sbjct: 251 ---FCRRLKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
Query: 418 EA 419
+A
Sbjct: 301 QA 302
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 14/154 (9%)
Query: 189 SHVNVVTLLGFCL--EGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
+H NV+ L+G L EG L+ +M +G L +F+ P + + + + +
Sbjct: 80 NHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFI-----RSPQRNPTVKDLISFGLQV 133
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK-LCTTKKGIVSSLLGARG 305
A+G+EYL + +H D+ N +LD+ F K++DFGLA+ + + V AR
Sbjct: 134 ARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL 190
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ + ALE S + KSDV+SFG+++ EL+
Sbjct: 191 PVKWTALE--SLQTYRFTTKSDVWSFGVLLWELL 222
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-YLRWEKMYEIVIGIAKGLE 251
V LLG CL + L+ + MP G L V Q L W + IAKG+
Sbjct: 81 VSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMS 133
Query: 252 YLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIA 311
YL R++H D+ N+L+ KI+DFGLA+L + + G + I ++A
Sbjct: 134 YLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA-DGGKVPIKWMA 189
Query: 312 LE-VFSRNFGEVSHKSDVYSFGMMIMELV 339
LE + R F +H+SDV+S+G+ + EL+
Sbjct: 190 LESILRRRF---THQSDVWSYGVTVWELM 215
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 82/160 (51%), Gaps = 19/160 (11%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGD----------TSKPCQYLRWEKM 239
H N++ LLG C L E+ P+G+L F+ + L +++
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
+A+G++YL + + +H ++ NIL+ +++ KI+DFGL++ ++ V
Sbjct: 142 LHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKK 195
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+G R + ++A+E S N+ + SDV+S+G+++ E+V
Sbjct: 196 TMG-RLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIV 232
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 181 GLASI-SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
G ASI + H N++ L G + ++ E M NGSL+ F+ D ++
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI-----QL 149
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 150 VGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G + I + + E + + + + SDV+S+G+++ E++
Sbjct: 207 TRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 32/242 (13%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG--- 245
H+NVV LLG C + G +I EF G+L ++ + + E +Y+ +
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 246 -------IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V
Sbjct: 187 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
AR + ++A E +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 244 K-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--- 296
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGST 417
R +++ G + + +M L C P RP +E++E L
Sbjct: 297 ---FCRRLKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346
Query: 418 EA 419
+A
Sbjct: 347 QA 348
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 36/244 (14%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNG------------DTSKPCQYLRW 236
H+NVV LLG C + G +I EF G+L ++ + D K +L
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK--DFLTL 149
Query: 237 EKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI 296
E + +AKG+E+L S + +H D+ NILL + KI DFGLA+
Sbjct: 150 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 206
Query: 297 VSSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
V AR + ++A E +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 207 VRK-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE- 261
Query: 356 YFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQG 415
R +++ G + + +M L C P RP +E++E L
Sbjct: 262 -----FCRRLKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 309
Query: 416 STEA 419
+A
Sbjct: 310 LLQA 313
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 181 GLASI-SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
G ASI + H N++ L G + ++ E M NGSL+ F+ D ++
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI-----QL 149
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G + I + + E + + + + SDV+S+G+++ E++
Sbjct: 207 TRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI E++P GSL ++ + + K+ + I
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QAHAERIDHIKLLQYTSQI 126
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H D+ NIL++ + KI DFGL K+ K
Sbjct: 127 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 184 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 213
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
L+ E++P+G L F+ L ++ I KG+EYL S R +H D+
Sbjct: 87 LVMEYLPSGCLRDFLQRHRAR-----LDASRLLLYSSQICKGMEYLG---SRRCVHRDLA 138
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL++ + KI+DFGLAKL K + I + A E S N S +SD
Sbjct: 139 ARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNI--FSRQSD 196
Query: 328 VYSFGMMIMEL 338
V+SFG+++ EL
Sbjct: 197 VWSFGVVLYEL 207
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 32/242 (13%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG--- 245
H+NVV LLG C + G +I EF G+L ++ + + E +Y+ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 246 -------IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
AR + ++A E +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 198 K-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--- 250
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGST 417
R +++ G + + +M L C P RP +E++E L
Sbjct: 251 ---FCRRLKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
Query: 418 EA 419
+A
Sbjct: 301 QA 302
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 32/242 (13%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG--- 245
H+NVV LLG C + G +I EF G+L ++ + + E +Y+ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 246 -------IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
AR + ++A E +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 198 K-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--- 250
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGST 417
R +++ G + + +M L C P RP +E++E L
Sbjct: 251 ---FCRRLKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
Query: 418 EA 419
+A
Sbjct: 301 QA 302
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 181 GLASI-SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
G ASI + H N++ L G + ++ E M NGSL+ F+ D ++
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI-----QL 120
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 121 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G + I + + E + + + + SDV+S+G+++ E++
Sbjct: 178 TRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 215
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L G ++ EFM NG+L+ F+ D ++ ++ GIA G
Sbjct: 74 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI-----QLVGMLRGIASG 128
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKG--IVSSLLGARGTI 307
+ YL +H D+ NIL++ + K+SDFGL++ +S LG + I
Sbjct: 129 MRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPI 185
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ A E + F + + SD +S+G+++ E++
Sbjct: 186 RWTAPEAIA--FRKFTSASDAWSYGIVMWEVM 215
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
L+ E++P+G L F+ L ++ I KG+EYL S R +H D+
Sbjct: 103 LVMEYLPSGCLRDFLQRHRAR-----LDASRLLLYSSQICKGMEYLG---SRRCVHRDLA 154
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL++ + KI+DFGLAKL K + I + A E S N S +SD
Sbjct: 155 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI--FSRQSD 212
Query: 328 VYSFGMMIMEL 338
V+SFG+++ EL
Sbjct: 213 VWSFGVVLYEL 223
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
L+ E++P+G L F+ L ++ I KG+EYL S R +H D+
Sbjct: 91 LVMEYLPSGCLRDFLQRHRAR-----LDASRLLLYSSQICKGMEYLG---SRRCVHRDLA 142
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL++ + KI+DFGLAKL K + I + A E S N S +SD
Sbjct: 143 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI--FSRQSD 200
Query: 328 VYSFGMMIMEL 338
V+SFG+++ EL
Sbjct: 201 VWSFGVVLYEL 211
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
L+ E++P+G L F+ L ++ I KG+EYL S R +H D+
Sbjct: 90 LVMEYLPSGCLRDFLQRHRAR-----LDASRLLLYSSQICKGMEYLG---SRRCVHRDLA 141
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
NIL++ + KI+DFGLAKL K + I + A E S N S +SD
Sbjct: 142 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI--FSRQSD 199
Query: 328 VYSFGMMIMEL 338
V+SFG+++ EL
Sbjct: 200 VWSFGVVLYEL 210
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L G ++ EFM NG+L+ F+ D ++ ++ GIA G
Sbjct: 76 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI-----QLVGMLRGIASG 130
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC--TTKKGIVSSLLGARGTI 307
+ YL +H D+ NIL++ + K+SDFGL++ + +S LG + I
Sbjct: 131 MRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPI 187
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ A E + F + + SD +S+G+++ E++
Sbjct: 188 RWTAPEAIA--FRKFTSASDAWSYGIVMWEVM 217
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 10/150 (6%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L G + +I E+M NGSL+ F+ D ++ ++ GI G
Sbjct: 89 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-----FTVIQLVGMLRGIGSG 143
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
++YL +H D+ NIL++ + K+SDFG++++ + G + I +
Sbjct: 144 MKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 200
Query: 310 IALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
A E + + + + SDV+S+G+++ E++
Sbjct: 201 TAPEAIA--YRKFTSASDVWSYGIVMWEVM 228
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 189 SHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V G C R LI E++P GSL ++ K + + K+ + I
Sbjct: 70 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQI 124
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
KG+EYL + R +H ++ NIL++ + KI DFGL K+ K
Sbjct: 125 CKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP 181
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
I + A E + + + S SDV+SFG+++ EL
Sbjct: 182 IFWYAPESLTES--KFSVASDVWSFGVVLYEL 211
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+S +H N+V L G L N ++ EF+P G L + D + P ++W +++
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL--DKAHP---IKWSVKLRLML 129
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILL-----DQDFCPKISDFGLAKLCTTKKGIVSS 299
IA G+EY+ + + I+H D++ NI L + C K++DFGL++ V S
Sbjct: 130 DIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS------VHS 182
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDS 347
+ G G ++A E + K+D YSF M++ ++ + D
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 10/150 (6%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L G + +I E+M NGSL+ F+ D ++ ++ GI G
Sbjct: 68 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-----FTVIQLVGMLRGIGSG 122
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
++YL +H D+ NIL++ + K+SDFG++++ + G + I +
Sbjct: 123 MKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 179
Query: 310 IALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
A E + + + + SDV+S+G+++ E++
Sbjct: 180 TAPEAIA--YRKFTSASDVWSYGIVMWEVM 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 10/150 (6%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L G + +I E+M NGSL+ F+ D ++ ++ GI G
Sbjct: 74 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-----FTVIQLVGMLRGIGSG 128
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
++YL +H D+ NIL++ + K+SDFG++++ + G + I +
Sbjct: 129 MKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 185
Query: 310 IALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
A E + + + + SDV+S+G+++ E++
Sbjct: 186 TAPEAIA--YRKFTSASDVWSYGIVMWEVM 213
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ + +H NV+ +E N ++ E G L + + + K + + +++ +
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQK--RLIPERTVWKYFV 143
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
+ LE++H S R++H DIKP N+ + K+ D GL + ++K SL+
Sbjct: 144 QLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV--- 197
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
GT Y++ E N + KSD++S G ++ E+ ++
Sbjct: 198 GTPYYMSPERIHEN--GYNFKSDIWSLGCLLYEMAALQS 234
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 19/168 (11%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+S +H N+V L G L N ++ EF+P G L + D + P ++W +++
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL--DKAHP---IKWSVKLRLML 129
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILL-----DQDFCPKISDFGLAKLCTTKKGIVSS 299
IA G+EY+ + + I+H D++ NI L + C K++DFG T + V S
Sbjct: 130 DIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG------TSQQSVHS 182
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDS 347
+ G G ++A E + K+D YSF M++ ++ + D
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIG 245
+VV LLG +G ++ E M +G L+ ++ + + +P L ++M ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAE 138
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
IA G+ YL+ + + +H D+ N ++ DF KI DFG+ + G +G
Sbjct: 139 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK---GGKG 192
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHV 365
+ + S G + SD++SFG+++ E+ G+ N
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-------------- 238
Query: 366 EQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
EQ +F + G + + +++ + C Q P RP E++ +L+
Sbjct: 239 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIG 245
+VV LLG +G ++ E M +G L+ ++ + + +P L ++M ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAE 138
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
IA G+ YL+ + + +H D+ N ++ DF KI DFG+ + G +G
Sbjct: 139 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK---GGKG 192
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHV 365
+ + S G + SD++SFG+++ E+ G+ N
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-------------- 238
Query: 366 EQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
EQ +F + G + + +++ + C Q P RP E++ +L+
Sbjct: 239 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIG 245
+VV LLG +G ++ E M +G L+ ++ + + +P L ++M ++
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAE 135
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
IA G+ YL+ + + +H D+ N ++ DF KI DFG+ + G +G
Sbjct: 136 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK---GGKG 189
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHV 365
+ + S G + SD++SFG+++ E+ G+ N
Sbjct: 190 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-------------- 235
Query: 366 EQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
EQ +F + G + + +++ + C Q P RP E++ +L+
Sbjct: 236 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V ++G C E + L+ E G L K++ + ++++ + + E+V ++ G++Y
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVSMGMKY 142
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L + +H D+ N+LL KISDFGL+K + + + + + A
Sbjct: 143 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 199
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIME 337
E N+ + S KSDV+SFG+++ E
Sbjct: 200 ECI--NYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V ++G C E + L+ E G L K++ + ++++ + + E+V ++ G++Y
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVSMGMKY 142
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L + +H D+ N+LL KISDFGL+K + + + + + A
Sbjct: 143 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 199
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIME 337
E N+ + S KSDV+SFG+++ E
Sbjct: 200 ECI--NYYKFSSKSDVWSFGVLMWE 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V ++G C E + L+ E G L K++ + ++++ + + E+V ++ G++Y
Sbjct: 88 IVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVSMGMKY 140
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L + +H D+ N+LL KISDFGL+K + + + + + A
Sbjct: 141 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 197
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIME 337
E N+ + S KSDV+SFG+++ E
Sbjct: 198 ECI--NYYKFSSKSDVWSFGVLMWE 220
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V ++G C E + L+ E G L K++ + ++++ + + E+V ++ G++Y
Sbjct: 433 IVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVSMGMKY 485
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L + +H D+ N+LL KISDFGL+K + + + + + A
Sbjct: 486 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 542
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIME 337
E N+ + S KSDV+SFG+++ E
Sbjct: 543 ECI--NYYKFSSKSDVWSFGVLMWE 565
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V ++G C E + L+ E G L K++ + ++++ + + E+V ++ G++Y
Sbjct: 432 IVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVSMGMKY 484
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L + +H D+ N+LL KISDFGL+K + + + + + A
Sbjct: 485 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 541
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIME 337
E N+ + S KSDV+SFG+++ E
Sbjct: 542 ECI--NYYKFSSKSDVWSFGVLMWE 564
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V ++G C E + L+ E G L K++ + ++++ + + E+V ++ G++Y
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVSMGMKY 126
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L + +H D+ N+LL KISDFGL+K + + + + + A
Sbjct: 127 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAP 183
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIME 337
E N+ + S KSDV+SFG+++ E
Sbjct: 184 ECI--NYYKFSSKSDVWSFGVLMWE 206
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V ++G C E + L+ E G L K++ + ++++ + + E+V ++ G++Y
Sbjct: 70 IVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVSMGMKY 122
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L + +H D+ N+LL KISDFGL+K + + + + + A
Sbjct: 123 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 179
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIME 337
E N+ + S KSDV+SFG+++ E
Sbjct: 180 ECI--NYYKFSSKSDVWSFGVLMWE 202
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V ++G C E + L+ E G L K++ + ++++ + + E+V ++ G++Y
Sbjct: 68 IVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVSMGMKY 120
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L + +H D+ N+LL KISDFGL+K + + + + + A
Sbjct: 121 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 177
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIME 337
E N+ + S KSDV+SFG+++ E
Sbjct: 178 ECI--NYYKFSSKSDVWSFGVLMWE 200
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V ++G C E + L+ E G L K++ + ++++ + + E+V ++ G++Y
Sbjct: 80 IVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVSMGMKY 132
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L + +H D+ N+LL KISDFGL+K + + + + + A
Sbjct: 133 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 189
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIME 337
E N+ + S KSDV+SFG+++ E
Sbjct: 190 ECI--NYYKFSSKSDVWSFGVLMWE 212
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V ++G C E + L+ E G L K++ + ++++ + + E+V ++ G++Y
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVSMGMKY 126
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L + +H D+ N+LL KISDFGL+K + + + + + A
Sbjct: 127 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 183
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIME 337
E N+ + S KSDV+SFG+++ E
Sbjct: 184 ECI--NYYKFSSKSDVWSFGVLMWE 206
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 21/184 (11%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNGSLEKFVYNGDTSKPCQYLRW 236
A + H +V L+G L + +I FM +G L F+ + L
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL 136
Query: 237 EKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT---- 292
+ + ++ IA G+EYL S +H D+ N +L +D ++DFGL++ +
Sbjct: 137 QTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY 193
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNS 352
++G S L + ++ALE + N V SDV++FG+ + E++ +G++N
Sbjct: 194 RQGCASKL-----PVKWLALESLADNLYTV--HSDVWAFGVTMWEIMTRGQTPYAGIEN- 245
Query: 353 SEVY 356
+E+Y
Sbjct: 246 AEIY 249
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 83/156 (53%), Gaps = 17/156 (10%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG 245
S+ SH N+V+++ E + L+ E++ +L +++ ++ P L +
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGP---LSVDTAINFTNQ 119
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK-LCTTKKGIVSSLLGAR 304
I G+++ H RI+H DIKP NIL+D + KI DFG+AK L T + +L
Sbjct: 120 ILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVL--- 173
Query: 305 GTIGYIALEVFSRNFGEVSHK-SDVYSFGMMIMELV 339
GT+ Y + E + GE + + +D+YS G+++ E++
Sbjct: 174 GTVQYFSPE---QAKGEATDECTDIYSIGIVLYEML 206
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 19/168 (11%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+S +H N+V L G L N ++ EF+P G L + D + P ++W +++
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL--DKAHP---IKWSVKLRLML 129
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILL-----DQDFCPKISDFGLAKLCTTKKGIVSS 299
IA G+EY+ + + I+H D++ NI L + C K++DF L++ V S
Sbjct: 130 DIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS------VHS 182
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDS 347
+ G G ++A E + K+D YSF M++ ++ + D
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 101/232 (43%), Gaps = 34/232 (14%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIG 245
+VV LLG +G ++ E M +G L+ ++ + + +P L ++M ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAE 138
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
IA G+ YL+ + + +H D+ N ++ DF KI DFG+ + I + +G
Sbjct: 139 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMT------RDIYETAYYRKG 189
Query: 306 TIGYIALEVF---SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
G + + S G + SD++SFG+++ E+ G+ N
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN----------- 238
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
EQ +F + G + + +++ + C Q P RP E++ +L+
Sbjct: 239 ---EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIG 245
+VV LLG +G ++ E M +G L+ ++ + + +P L ++M ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAE 138
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
IA G+ YL+ + + +H D+ N ++ DF KI DFG+ + G +G
Sbjct: 139 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK---GGKG 192
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHV 365
+ + S G + SD++SFG+++ E+ G+ N
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-------------- 238
Query: 366 EQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
EQ +F + G + + +++ + C Q P RP E++ +L+
Sbjct: 239 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
Query: 211 EFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHN 270
E+ NG+L +++ + ++ + ++ + + I + L Y+H S I+H D+KP N
Sbjct: 95 EYCENGTLYDLIHSENLNQ-----QRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMN 146
Query: 271 ILLDQDFCPKISDFGLAKLCTTKKGIVS-----------SLLGARGTIGYIALEVFSRNF 319
I +D+ KI DFGLAK I+ +L A GT Y+A EV
Sbjct: 147 IFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD-GT 205
Query: 320 GEVSHKSDVYSFGMMIMELV 339
G + K D+YS G++ E++
Sbjct: 206 GHYNEKIDMYSLGIIFFEMI 225
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
SH +V L G C + +I E+M NG L ++ Q ++ E+ + +
Sbjct: 61 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-----QLLEMCKDVCE 115
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
+EYL S + LH D+ N L++ K+SDFGL++ + +S +G++ +
Sbjct: 116 AMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVR 170
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
+ EV + + S KSD+++FG+++ E+
Sbjct: 171 WSPPEVLM--YSKFSSKSDIWAFGVLMWEI 198
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 23/155 (14%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H NVV + L G ++ EF+ G+L V L E++ + + +
Sbjct: 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-------RLNEEQIATVCEAVLQ 152
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFG----LAKLCTTKKGIVSSLLGAR 304
L YLH + ++H DIK +ILL D K+SDFG ++K +K +V
Sbjct: 153 ALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV------- 202
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
GT ++A EV SR+ + + D++S G+M++E+V
Sbjct: 203 GTPYWMAPEVISRSL--YATEVDIWSLGIMVIEMV 235
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 25/155 (16%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H NVV + L G+ ++ EF+ G+L V + ++ E++ + + + +
Sbjct: 101 HDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-------EQIATVCLSVLRA 153
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFG----LAKLCTTKKGIVSSLLGARG 305
L YLH + ++H DIK +ILL D K+SDFG ++K +K +V G
Sbjct: 154 LSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV-------G 203
Query: 306 TIGYIALEVFSR-NFGEVSHKSDVYSFGMMIMELV 339
T ++A EV SR +G + D++S G+M++E++
Sbjct: 204 TPYWMAPEVISRLPYGT---EVDIWSLGIMVIEMI 235
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 30/234 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRWEKMYEIVI 244
+VV LLG +G +I E M G L+ ++ N P KM ++
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL---SKMIQMAG 130
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
IA G+ YL+ + + +H D+ N ++ +DF KI DFG+ + G +
Sbjct: 131 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK---GGK 184
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
G + + S G + SDV+SFG+++ E+ G+ N
Sbjct: 185 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------------- 231
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTE 418
EQ F + G + K + ++ + C Q P RP E+I ++ E
Sbjct: 232 -EQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEME 284
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
SH +V L G C + +I E+M NG L ++ Q ++ E+ + +
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-----QLLEMCKDVCE 116
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
+EYL S + LH D+ N L++ K+SDFGL++ + +S +G++ +
Sbjct: 117 AMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVR 171
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
+ EV + + S KSD+++FG+++ E+
Sbjct: 172 WSPPEVLM--YSKFSSKSDIWAFGVLMWEI 199
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 12/150 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
SH +V L G C + +I E+M NG L ++ + + +++ E+ + +
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCE 131
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
+EYL S + LH D+ N L++ K+SDFGL++ + +S +G++ +
Sbjct: 132 AMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVR 186
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
+ EV + + S KSD+++FG+++ E+
Sbjct: 187 WSPPEVLM--YSKFSSKSDIWAFGVLMWEI 214
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 12/150 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
SH +V L G C + +I E+M NG L ++ + + +++ E+ + +
Sbjct: 57 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCE 111
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
+EYL S + LH D+ N L++ K+SDFGL++ + +S +G++ +
Sbjct: 112 AMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVR 166
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
+ EV + + S KSD+++FG+++ E+
Sbjct: 167 WSPPEVLM--YSKFSSKSDIWAFGVLMWEI 194
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRA-LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIV 243
+++ H N+V LLG +E ++ E+M GSL ++ S+ L + + +
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFS 123
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
+ + + +EYL +H D+ N+L+ +D K+SDFGL K ++ +
Sbjct: 124 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT------G 174
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
+ + + A E + S KSDV+SFG+++ E+
Sbjct: 175 KLPVKWTAPEALREK--KFSTKSDVWSFGILLWEI 207
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 76/182 (41%), Gaps = 22/182 (12%)
Query: 184 SISRTSHVNVVTLLGFCLEGN----NRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
S+ H N++ +G G + LI F GSL F+ + W ++
Sbjct: 71 SLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL-------KANVVSWNEL 123
Query: 240 YEIVIGIAKGLEYLHR-------GCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
I +A+GL YLH G I H DIK N+LL + I+DFGLA
Sbjct: 124 CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEA 183
Query: 293 KKGIVSSLLGARGTIGYIALEVF--SRNFGEVSH-KSDVYSFGMMIMELVGCKNNLDSGV 349
K G GT Y+A EV + NF + + D+Y+ G+++ EL D V
Sbjct: 184 GKS-AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPV 242
Query: 350 DN 351
D
Sbjct: 243 DE 244
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 12/150 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
SH +V L G C + +I E+M NG L ++ + + +++ E+ + +
Sbjct: 68 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCE 122
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
+EYL S + LH D+ N L++ K+SDFGL++ + +S +G++ +
Sbjct: 123 AMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVR 177
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
+ EV + + S KSD+++FG+++ E+
Sbjct: 178 WSPPEVLM--YSKFSSKSDIWAFGVLMWEI 205
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIG 245
+VV LLG +G ++ E M +G L+ ++ + + +P L ++M ++
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAE 137
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
IA G+ YL+ + + +H D+ N ++ DF KI DFG+ + G +G
Sbjct: 138 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK---GGKG 191
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHV 365
+ + S G + SD++SFG+++ E+ G+ N
Sbjct: 192 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-------------- 237
Query: 366 EQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
EQ +F + G + + +++ + C Q P RP E++ +L+
Sbjct: 238 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 12/150 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
SH +V L G C + +I E+M NG L ++ + + +++ E+ + +
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCE 131
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
+EYL S + LH D+ N L++ K+SDFGL++ + +S +G++ +
Sbjct: 132 AMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE--TSSVGSKFPVR 186
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
+ EV + + S KSD+++FG+++ E+
Sbjct: 187 WSPPEVLM--YSKFSSKSDIWAFGVLMWEI 214
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 42/250 (16%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPC------------- 231
+ + +H +V+ L G C + LI E+ GSL F+ P
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 232 -----QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGL 286
+ L + I++G++YL +++H D+ NIL+ + KISDFGL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 287 AKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLD 346
++ + V G R + ++A+E + + +SDV+SFG+++ E+V N
Sbjct: 197 SRDVYEEDSXVKRSQG-RIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTLGGN-- 251
Query: 347 SGVDNSSEVYFPHWIYRHVEQDREFKLL--GVVTKKENEIAKKMIIVGLWCIQARPYDRP 404
Y + +R F LL G ++ + +++M + L C + P RP
Sbjct: 252 --------------PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
Query: 405 PMNEVIEMLQ 414
++ + L+
Sbjct: 298 VFADISKDLE 307
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 15/148 (10%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 251
N+V L L G+ ++ E++ GSL V ++ C + ++ + + LE
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETC--MDEGQIAAVCRECLQALE 130
Query: 252 YLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIA 311
+LH S +++H DIK NILL D K++DFG T ++ S+++ GT ++A
Sbjct: 131 FLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMA 184
Query: 312 LEVFSRNFGEVSHKSDVYSFGMMIMELV 339
EV +R K D++S G+M +E++
Sbjct: 185 PEVVTRK--AYGPKVDIWSLGIMAIEMI 210
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRA-LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIV 243
+++ H N+V LLG +E ++ E+M GSL ++ S+ L + + +
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFS 295
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
+ + + +EYL +H D+ N+L+ +D K+SDFGL K ++ +
Sbjct: 296 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT------G 346
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
+ + + A E + S KSDV+SFG+++ E+
Sbjct: 347 KLPVKWTAPEALREK--KFSTKSDVWSFGILLWEI 379
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRA-LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIV 243
+++ H N+V LLG +E ++ E+M GSL ++ S+ L + + +
Sbjct: 53 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFS 108
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
+ + + +EYL +H D+ N+L+ +D K+SDFGL K ++ +
Sbjct: 109 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT------G 159
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
+ + + A E + S KSDV+SFG+++ E+
Sbjct: 160 KLPVKWTAPEALREK--KFSTKSDVWSFGILLWEI 192
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 35/204 (17%)
Query: 211 EFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHN 270
EF G+LE+++ K + L E+ I KG++Y+H S +++H D+KP N
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVL----ALELFEQITKGVDYIH---SKKLIHRDLKPSN 166
Query: 271 ILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE-VFSRNFGEVSHKSDVY 329
I L KI DFGL S +GT+ Y++ E + S+++G+ + D+Y
Sbjct: 167 IFLVDTKQVKIGDFGLVTSLKNDGKRTRS----KGTLRYMSPEQISSQDYGK---EVDLY 219
Query: 330 SFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMI 389
+ G+++ EL+ D+ + S +F R+ + + KKE + +K+
Sbjct: 220 ALGLILAELLHV---CDTAFETSK--FFTDL--------RDGIISDIFDKKEKTLLQKL- 265
Query: 390 IVGLWCIQARPYDRPPMNEVIEML 413
+ +P DRP +E++ L
Sbjct: 266 ------LSKKPEDRPNTSEILRTL 283
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 8/94 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
+A GL++LH S I++ D+KP NILLD++ K++DFGL+K + S G
Sbjct: 139 LALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC---G 192
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T+ Y+A EV +R SH +D +S+G+++ E++
Sbjct: 193 TVEYMAPEVVNRQGH--SHSADWWSYGVLMFEML 224
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V ++ N L + E+ G L + G +K QYL E + ++ +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKG--TKERQYLDEEFVLRVMTQL 120
Query: 247 AKGLEYLHR---GCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
L+ HR G T +LH D+KP N+ LD K+ DFGLA++ + +
Sbjct: 121 TLALKECHRRSDGGHT-VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-- 177
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
GT Y++ E +R + KSD++S G ++ EL
Sbjct: 178 -GTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYEL 209
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 10/97 (10%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSLLGA 303
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +S +
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-- 195
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
GT Y++ E+ + S SD+++ G +I +LV
Sbjct: 196 -GTAQYVSPELLTEK--SASKSSDLWALGCIIYQLVA 229
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V ++ N L + E+ G L + G +K QYL E + ++ +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKG--TKERQYLDEEFVLRVMTQL 120
Query: 247 AKGLEYLHR---GCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
L+ HR G T +LH D+KP N+ LD K+ DFGLA++ + +
Sbjct: 121 TLALKECHRRSDGGHT-VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-- 177
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
GT Y++ E +R + KSD++S G ++ EL
Sbjct: 178 -GTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYEL 209
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 42/250 (16%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPC------------- 231
+ + +H +V+ L G C + LI E+ GSL F+ P
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 232 -----QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGL 286
+ L + I++G++YL +++H D+ NIL+ + KISDFGL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 287 AKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLD 346
++ + V G R + ++A+E + + +SDV+SFG+++ E+V N
Sbjct: 197 SRDVYEEDSYVKRSQG-RIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTLGGN-- 251
Query: 347 SGVDNSSEVYFPHWIYRHVEQDREFKLL--GVVTKKENEIAKKMIIVGLWCIQARPYDRP 404
Y + +R F LL G ++ + +++M + L C + P RP
Sbjct: 252 --------------PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
Query: 405 PMNEVIEMLQ 414
++ + L+
Sbjct: 298 VFADISKDLE 307
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L FC + + + + NG L K++ G + C + Y
Sbjct: 91 MSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 142
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 143 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 199
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 200 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 234
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 208 LIYEFMPNGSLEKF---VYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHF 264
+IYE+M N S+ KF + D + C ++ + + I+ + Y+H I H
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTC-FIPIQVIKCIIKSVLNSFSYIHN--EKNICHR 176
Query: 265 DIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSH 324
D+KP NIL+D++ K+SDFG ++ KK + G+RGT ++ E FS
Sbjct: 177 DVKPSNILMDKNGRVKLSDFGESEYMVDKK-----IKGSRGTYEFMPPEFFSNESSYNGA 231
Query: 325 KSDVYSFGM 333
K D++S G+
Sbjct: 232 KVDIWSLGI 240
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
H N+V ++ N L + E+ G L + G +K QYL E + ++ +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKG--TKERQYLDEEFVLRVMTQL 120
Query: 247 AKGLEYLHR---GCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
L+ HR G T +LH D+KP N+ LD K+ DFGLA++ + +
Sbjct: 121 TLALKECHRRSDGGHT-VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-- 177
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
GT Y++ E +R + KSD++S G ++ EL
Sbjct: 178 -GTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYEL 209
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRA-LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIV 243
+++ H N+V LLG +E ++ E+M GSL ++ S+ L + + +
Sbjct: 59 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFS 114
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
+ + + +EYL +H D+ N+L+ +D K+SDFGL K ++ +
Sbjct: 115 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT------G 165
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
+ + + A E S KSDV+SFG+++ E+
Sbjct: 166 KLPVKWTAPEALRE--AAFSTKSDVWSFGILLWEI 198
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 30/234 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRWEKMYEIVI 244
+VV LLG +G +I E M G L+ ++ N P KM ++
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL---SKMIQMAG 139
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
IA G+ YL+ + + +H D+ N ++ +DF KI DFG+ + G +
Sbjct: 140 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK---GGK 193
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
G + + S G + SDV+SFG+++ E+ G+ N
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------------- 240
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTE 418
EQ F + G + K + + + C Q P RP E+I ++ E
Sbjct: 241 -EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 293
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H + L + E + L+ M G + +YN D P + + I
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIVS 300
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
GLE+LH+ I++ D+KP N+LLD D +ISD GLA K + G GT G
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKGYAGTPG 354
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
++A E+ E D ++ G+ + E++ +
Sbjct: 355 FMAPELLLGE--EYDFSVDYFALGVTLYEMIAARG 387
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 251
N+V L L G+ ++ E++ GSL V ++ C + ++ + + LE
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETC--MDEGQIAAVCRECLQALE 130
Query: 252 YLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIA 311
+LH S +++H DIK NILL D K++DFG T ++ S ++ GT ++A
Sbjct: 131 FLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV---GTPYWMA 184
Query: 312 LEVFSRNFGEVSHKSDVYSFGMMIMELV 339
EV +R K D++S G+M +E++
Sbjct: 185 PEVVTRK--AYGPKVDIWSLGIMAIEMI 210
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H + L + E + L+ M G + +YN D P + + I
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIVS 300
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
GLE+LH+ I++ D+KP N+LLD D +ISD GLA K + G GT G
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKGYAGTPG 354
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
++A E+ E D ++ G+ + E++ +
Sbjct: 355 FMAPELLLGE--EYDFSVDYFALGVTLYEMIAARG 387
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H + L + E + L+ M G + +YN D P + + I
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIVS 300
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
GLE+LH+ I++ D+KP N+LLD D +ISD GLA K + G GT G
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKGYAGTPG 354
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
++A E+ E D ++ G+ + E++ +
Sbjct: 355 FMAPELLLGE--EYDFSVDYFALGVTLYEMIAARG 387
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 190 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H + L + E + L+ M G + +YN D P + + I
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIVS 300
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
GLE+LH+ I++ D+KP N+LLD D +ISD GLA K + G GT G
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKGYAGTPG 354
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
++A E+ E D ++ G+ + E++ +
Sbjct: 355 FMAPELLLGE--EYDFSVDYFALGVTLYEMIAARG 387
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
SH +V L G C + +I E+M NG L ++ Q ++ E+ + +
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-----QLLEMCKDVCE 116
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
+EYL S + LH D+ N L++ K+SDFGL++ + +S G++ +
Sbjct: 117 AMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSRGSKFPVR 171
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
+ EV + + S KSD+++FG+++ E+
Sbjct: 172 WSPPEVLM--YSKFSSKSDIWAFGVLMWEI 199
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 25/156 (16%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H NVV + L G+ ++ EF+ G+L V + ++ E++ + + + +
Sbjct: 206 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-------EQIAAVCLAVLQ 258
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFG----LAKLCTTKKGIVSSLLGAR 304
L LH + ++H DIK +ILL D K+SDFG ++K +K +V
Sbjct: 259 ALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------- 308
Query: 305 GTIGYIALEVFSR-NFGEVSHKSDVYSFGMMIMELV 339
GT ++A E+ SR +G + D++S G+M++E+V
Sbjct: 309 GTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMV 341
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 30/234 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRWEKMYEIVI 244
+VV LLG +G +I E M G L+ ++ N P KM ++
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL---SKMIQMAG 145
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
IA G+ YL+ + + +H D+ N ++ +DF KI DFG+ + G +
Sbjct: 146 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK---GGK 199
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
G + + S G + SDV+SFG+++ E+ G+ N
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------------- 246
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTE 418
EQ F + G + K + + + C Q P RP E+I ++ E
Sbjct: 247 -EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIG 245
+VV LLG +G ++ E M +G L+ ++ + + +P L ++M ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAE 138
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
IA G+ YL+ + + +H ++ N ++ DF KI DFG+ + G +G
Sbjct: 139 IADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK---GGKG 192
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHV 365
+ + S G + SD++SFG+++ E+ G+ N
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-------------- 238
Query: 366 EQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
EQ +F + G + + +++ + C Q P RP E++ +L+
Sbjct: 239 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--------VYNGDTSKPCQYLRW 236
++ H ++V G C+EG+ +++E+M +G L KF V + + P + L
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE-LTQ 127
Query: 237 EKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI 296
+M I IA G+ YL S +H D+ N L+ ++ KI DFG+++ +
Sbjct: 128 SQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD-- 182
Query: 297 VSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
+G + + S + + + +SDV+S G+++ E+
Sbjct: 183 -YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 223
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 17/149 (11%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 251
N+V L L G+ ++ E++ GSL V ++ C + ++ + + LE
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETC--MDEGQIAAVCRECLQALE 131
Query: 252 YLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIA 311
+LH S +++H DIK NILL D K++DFG T ++ S ++ GT ++A
Sbjct: 132 FLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV---GTPYWMA 185
Query: 312 LEVFSRN-FGEVSHKSDVYSFGMMIMELV 339
EV +R +G K D++S G+M +E++
Sbjct: 186 PEVVTRKAYG---PKVDIWSLGIMAIEMI 211
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIG 245
+VV LLG +G ++ E M +G L+ ++ + + +P L ++M ++
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAE 139
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
IA G+ YL+ + + +H ++ N ++ DF KI DFG+ + G +G
Sbjct: 140 IADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK---GGKG 193
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHV 365
+ + S G + SD++SFG+++ E+ G+ N
Sbjct: 194 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-------------- 239
Query: 366 EQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
EQ +F + G + + +++ + C Q P RP E++ +L+
Sbjct: 240 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 251
N+V L L G+ ++ E++ GSL V ++ C + ++ + + LE
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETC--MDEGQIAAVCRECLQALE 130
Query: 252 YLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIA 311
+LH S +++H DIK NILL D K++DFG T ++ S ++ GT ++A
Sbjct: 131 FLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV---GTPYWMA 184
Query: 312 LEVFSRNFGEVSHKSDVYSFGMMIMELV 339
EV +R K D++S G+M +E++
Sbjct: 185 PEVVTRK--AYGPKVDIWSLGIMAIEMI 210
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 105/250 (42%), Gaps = 42/250 (16%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPC------------- 231
+ + +H +V+ L G C + LI E+ GSL F+ P
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 232 -----QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGL 286
+ L + I++G++YL ++H D+ NIL+ + KISDFGL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 287 AKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLD 346
++ + V G R + ++A+E + + +SDV+SFG+++ E+V N
Sbjct: 197 SRDVYEEDSXVKRSQG-RIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTLGGN-- 251
Query: 347 SGVDNSSEVYFPHWIYRHVEQDREFKLL--GVVTKKENEIAKKMIIVGLWCIQARPYDRP 404
Y + +R F LL G ++ + +++M + L C + P RP
Sbjct: 252 --------------PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
Query: 405 PMNEVIEMLQ 414
++ + L+
Sbjct: 298 VFADISKDLE 307
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 30/234 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRWEKMYEIVI 244
+VV LLG +G +I E M G L+ ++ N P KM ++
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL---SKMIQMAG 145
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
IA G+ YL+ + + +H D+ N ++ +DF KI DFG+ + G +
Sbjct: 146 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK---GGK 199
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
G + + S G + SDV+SFG+++ E+ G+ N
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------------- 246
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTE 418
EQ F + G + K + + + C Q P RP E+I ++ E
Sbjct: 247 -EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 25/156 (16%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H NVV + L G+ ++ EF+ G+L V + ++ E++ + + + +
Sbjct: 86 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-------EQIAAVCLAVLQ 138
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFG----LAKLCTTKKGIVSSLLGAR 304
L LH + ++H DIK +ILL D K+SDFG ++K +K +V
Sbjct: 139 ALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------- 188
Query: 305 GTIGYIALEVFSR-NFGEVSHKSDVYSFGMMIMELV 339
GT ++A E+ SR +G + D++S G+M++E+V
Sbjct: 189 GTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMV 221
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 30/234 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRWEKMYEIVI 244
+VV LLG +G +I E M G L+ ++ N P KM ++
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL---SKMIQMAG 135
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
IA G+ YL+ + + +H D+ N ++ +DF KI DFG+ + G +
Sbjct: 136 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK---GGK 189
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
G + + S G + SDV+SFG+++ E+ G+ N
Sbjct: 190 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------------- 236
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTE 418
EQ F + G + K + + + C Q P RP E+I ++ E
Sbjct: 237 -EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 289
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 25/156 (16%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H NVV + L G+ ++ EF+ G+L V + ++ E++ + + + +
Sbjct: 84 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-------EQIAAVCLAVLQ 136
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFG----LAKLCTTKKGIVSSLLGAR 304
L LH + ++H DIK +ILL D K+SDFG ++K +K +V
Sbjct: 137 ALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------- 186
Query: 305 GTIGYIALEVFSR-NFGEVSHKSDVYSFGMMIMELV 339
GT ++A E+ SR +G + D++S G+M++E+V
Sbjct: 187 GTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMV 219
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 27/198 (13%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I G +YLHR R++H D+K N+ L++D KI DFGLA +L G
Sbjct: 130 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC---G 183
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHV 365
T YIA EV S+ S + DV+S G ++ L+ K ++ + Y +
Sbjct: 184 TPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET--------YLRI 233
Query: 366 EQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI--EMLQGSTEALQIP 423
+++ E+ + K N +A +I +Q P RP +NE++ E ++P
Sbjct: 234 KKN-EYS----IPKHINPVAASLI---QKMLQTDPTARPTINELLNDEFFTSGYIPARLP 285
Query: 424 PTPFLSSPPRASIDSSTL 441
T L+ PPR SI S+L
Sbjct: 286 IT-CLTIPPRFSIAPSSL 302
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKL--CTTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX---GT 169
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE 216
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 25/156 (16%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H NVV + L G+ ++ EF+ G+L V + ++ E++ + + + +
Sbjct: 129 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-------EQIAAVCLAVLQ 181
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFG----LAKLCTTKKGIVSSLLGAR 304
L LH + ++H DIK +ILL D K+SDFG ++K +K +V
Sbjct: 182 ALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------- 231
Query: 305 GTIGYIALEVFSR-NFGEVSHKSDVYSFGMMIMELV 339
GT ++A E+ SR +G + D++S G+M++E+V
Sbjct: 232 GTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMV 264
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 30/234 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRWEKMYEIVI 244
+VV LLG +G +I E M G L+ ++ N P KM ++
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL---SKMIQMAG 136
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
IA G+ YL+ + + +H D+ N ++ +DF KI DFG+ + G +
Sbjct: 137 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK---GGK 190
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
G + + S G + SDV+SFG+++ E+ G+ N
Sbjct: 191 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------------- 237
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTE 418
EQ F + G + K + + + C Q P RP E+I ++ E
Sbjct: 238 -EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 290
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 30/245 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF----------VYNGDTSKPCQYL 234
++ H ++V G C +G+ +++E+M +G L KF + +G + L
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 235 RWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKK 294
+M I IA G+ YL S +H D+ N L+ + KI DFG+++ +
Sbjct: 131 GLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD 187
Query: 295 GIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+G + + S + + + +SDV+SFG+++ E+ + N+
Sbjct: 188 ---YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 244
Query: 355 VYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
+ E G V ++ K++ V L C Q P R + E+ ++L
Sbjct: 245 I--------------ECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILH 290
Query: 415 GSTEA 419
+A
Sbjct: 291 ALGKA 295
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 27/198 (13%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I G +YLHR R++H D+K N+ L++D KI DFGLA +L G
Sbjct: 126 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC---G 179
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHV 365
T YIA EV S+ S + DV+S G ++ L+ K ++ + Y +
Sbjct: 180 TPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET--------YLRI 229
Query: 366 EQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI--EMLQGSTEALQIP 423
+++ E+ + K N +A +I +Q P RP +NE++ E ++P
Sbjct: 230 KKN-EYS----IPKHINPVAASLI---QKMLQTDPTARPTINELLNDEFFTSGYIPARLP 281
Query: 424 PTPFLSSPPRASIDSSTL 441
T L+ PPR SI S+L
Sbjct: 282 IT-CLTIPPRFSIAPSSL 298
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 30/234 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRWEKMYEIVI 244
+VV LLG +G +I E M G L+ ++ N P KM ++
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL---SKMIQMAG 138
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
IA G+ YL+ + + +H D+ N ++ +DF KI DFG+ + G +
Sbjct: 139 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK---GGK 192
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
G + + S G + SDV+SFG+++ E+ G+ N
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------------- 239
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTE 418
EQ F + G + K + + + C Q P RP E+I ++ E
Sbjct: 240 -EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 30/234 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRWEKMYEIVI 244
+VV LLG +G +I E M G L+ ++ N P KM ++
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL---SKMIQMAG 167
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
IA G+ YL+ + + +H D+ N ++ +DF KI DFG+ + G +
Sbjct: 168 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK---GGK 221
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
G + + S G + SDV+SFG+++ E+ G+ N
Sbjct: 222 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------------- 268
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTE 418
EQ F + G + K + + + C Q P RP E+I ++ E
Sbjct: 269 -EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 321
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 25/156 (16%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H NVV + L G+ ++ EF+ G+L V + ++ E++ + + + +
Sbjct: 79 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-------EQIAAVCLAVLQ 131
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFG----LAKLCTTKKGIVSSLLGAR 304
L LH + ++H DIK +ILL D K+SDFG ++K +K +V
Sbjct: 132 ALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------- 181
Query: 305 GTIGYIALEVFSR-NFGEVSHKSDVYSFGMMIMELV 339
GT ++A E+ SR +G + D++S G+M++E+V
Sbjct: 182 GTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMV 214
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC--TTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX---GT 170
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 171 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 30/234 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRWEKMYEIVI 244
+VV LLG +G +I E M G L+ ++ N P KM ++
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL---SKMIQMAG 139
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
IA G+ YL+ + + +H D+ N ++ +DF KI DFG+ + G +
Sbjct: 140 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK---GGK 193
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
G + + S G + SDV+SFG+++ E+ G+ N
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------------- 240
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTE 418
EQ F + G + K + + + C Q P RP E+I ++ E
Sbjct: 241 -EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 293
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC--TTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX---GT 169
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC--TTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX---GT 169
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 25/156 (16%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H NVV + L G+ ++ EF+ G+L V + ++ E++ + + + +
Sbjct: 75 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-------EQIAAVCLAVLQ 127
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFG----LAKLCTTKKGIVSSLLGAR 304
L LH + ++H DIK +ILL D K+SDFG ++K +K +V
Sbjct: 128 ALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------- 177
Query: 305 GTIGYIALEVFSR-NFGEVSHKSDVYSFGMMIMELV 339
GT ++A E+ SR +G + D++S G+M++E+V
Sbjct: 178 GTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMV 210
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 30/234 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRWEKMYEIVI 244
+VV LLG +G +I E M G L+ ++ N P KM ++
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL---SKMIQMAG 138
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
IA G+ YL+ + + +H D+ N ++ +DF KI DFG+ + G +
Sbjct: 139 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK---GGK 192
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
G + + S G + SDV+SFG+++ E+ G+ N
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------------- 239
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTE 418
EQ F + G + K + + + C Q P RP E+I ++ E
Sbjct: 240 -EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V L+G C + L+ E G L KF+ P + E++ ++ G++Y
Sbjct: 72 IVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS-----NVAELLHQVSMGMKY 125
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L +H D+ N+LL KISDFGL+K ++ + + + A
Sbjct: 126 LE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 182
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIME 337
E NF + S +SDV+S+G+ + E
Sbjct: 183 ECI--NFRKFSSRSDVWSYGVTMWE 205
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS------- 298
I + L Y+H S I+H D+KP NI +D+ KI DFGLAK I+
Sbjct: 125 ILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 299 ----SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+L A GT Y+A EV G + K D+YS G++ E++
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKL--CTTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX---GT 169
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 114
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKL--CTTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 115 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 168
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 169 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 215
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 30/234 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRWEKMYEIVI 244
+VV LLG +G +I E M G L+ ++ N P KM ++
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL---SKMIQMAG 132
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
IA G+ YL+ + + +H D+ N ++ +DF KI DFG+ + G +
Sbjct: 133 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK---GGK 186
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
G + + S G + SDV+SFG+++ E+ G+ N
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------------- 233
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTE 418
EQ F + G + K + + + C Q P RP E+I ++ E
Sbjct: 234 -EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKL--CTTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 170
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 171 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKL--CTTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 170
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 171 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKL--CTTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 170
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 171 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC--TTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 169
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKL--CTTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 170
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 171 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKL--CTTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 169
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKL--CTTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 170
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 171 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC--TTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 169
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKL--CTTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 169
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ + + +N ++ E G L + + + L + E++ +
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKA--LSEGYVAELMKQMMNA 136
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSLLGARG 305
L Y H S ++H D+KP NIL QD P KI DFGLA+L + + + A G
Sbjct: 137 LAYFH---SQHVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTN----AAG 188
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFG-MMIMELVGC 341
T Y+A EVF R+ V+ K D++S G +M L GC
Sbjct: 189 TALYMAPEVFKRD---VTFKCDIWSAGVVMYFLLTGC 222
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKL--CTTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 169
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC--TTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 170
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 171 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKL--CTTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 169
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKL--CTTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 170
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 171 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 87 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 138
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +S
Sbjct: 139 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 196 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 230
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKL--CTTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 169
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 30/234 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRWEKMYEIVI 244
+VV LLG +G +I E M G L+ ++ N P KM ++
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL---SKMIQMAG 132
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
IA G+ YL+ + + +H D+ N + +DF KI DFG+ + G +
Sbjct: 133 EIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK---GGK 186
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
G + + S G + SDV+SFG+++ E+ G+ N
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------------- 233
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTE 418
EQ F + G + K + ++ + C Q P RP E+I ++ E
Sbjct: 234 -EQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 33/201 (16%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT---TKKGIVSSLLG 302
I G +YLHR R++H D+K N+ L++D KI DFGLA +K ++
Sbjct: 150 IVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---- 202
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
GT YIA EV S+ S + DV+S G ++ L+ K ++ + Y
Sbjct: 203 --GTPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET--------Y 250
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI--EMLQGSTEAL 420
++++ E+ + K N +A +I +Q P RP +NE++ E
Sbjct: 251 LRIKKN-EYS----IPKHINPVAASLI---QKMLQTDPTARPTINELLNDEFFTSGYIPA 302
Query: 421 QIPPTPFLSSPPRASIDSSTL 441
++P T L+ PPR SI S+L
Sbjct: 303 RLPIT-CLTIPPRFSIAPSSL 322
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 33/201 (16%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT---TKKGIVSSLLG 302
I G +YLHR R++H D+K N+ L++D KI DFGLA +K ++
Sbjct: 148 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---- 200
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
GT YIA EV S+ S + DV+S G ++ L+ K ++ + Y
Sbjct: 201 --GTPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET--------Y 248
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI--EMLQGSTEAL 420
++++ E+ + K N +A +I +Q P RP +NE++ E
Sbjct: 249 LRIKKN-EYS----IPKHINPVAASLI---QKMLQTDPTARPTINELLNDEFFTSGYIPA 300
Query: 421 QIPPTPFLSSPPRASIDSSTL 441
++P T L+ PPR SI S+L
Sbjct: 301 RLPIT-CLTIPPRFSIAPSSL 320
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKL--CTTKKGIVSSLLGARGT 306
G+ YLH I H DIKP N+LLD+ KISDFGLA + ++ +++ + GT
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GT 169
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
+ Y+A E+ R + DV+S G+++ ++ + D D+ E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 15/148 (10%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 251
N+V L L G+ ++ E++ GSL V ++ C + ++ + + LE
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETC--MDEGQIAAVCRECLQALE 131
Query: 252 YLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIA 311
+LH S +++H +IK NILL D K++DFG T ++ S+++ GT ++A
Sbjct: 132 FLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMA 185
Query: 312 LEVFSRNFGEVSHKSDVYSFGMMIMELV 339
EV +R K D++S G+M +E++
Sbjct: 186 PEVVTRK--AYGPKVDIWSLGIMAIEMI 211
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 83 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 134
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +S
Sbjct: 135 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 192 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 226
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 23/164 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
+A + H N++ L F + N L+ E G L + +++ ++
Sbjct: 87 VAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL--------FDEIIHRMKFNEVDA 138
Query: 242 IVI--GIAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAKLCTTKKGI 296
VI + G+ YLH+ I+H D+KP N+LL ++D KI DFGL+ + +K +
Sbjct: 139 AVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM 195
Query: 297 VSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
L GT YIA EV + + E K DV+S G+++ L+
Sbjct: 196 KERL----GTAYYIAPEVLRKKYDE---KCDVWSIGVILFILLA 232
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS----LEKFVYNGDTSKPCQYLRWE 237
+ ++S+ H N+V+ + + L+ + + GS ++ V G+ L
Sbjct: 59 IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV--LDES 116
Query: 238 KMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIV 297
+ I+ + +GLEYLH+ +H D+K NILL +D +I+DFG++ T I
Sbjct: 117 TIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 173
Query: 298 SSLLGAR--GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ + GT ++A EV + G K+D++SFG+ +EL
Sbjct: 174 RNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELA 216
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS----LEKFVYNGDTSKPCQYLRWE 237
+ ++S+ H N+V+ + + L+ + + GS ++ V G+ L
Sbjct: 64 IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV--LDES 121
Query: 238 KMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIV 297
+ I+ + +GLEYLH+ +H D+K NILL +D +I+DFG++ T I
Sbjct: 122 TIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 178
Query: 298 SSLLGAR--GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ + GT ++A EV + G K+D++SFG+ +EL
Sbjct: 179 RNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELA 221
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 33/239 (13%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY-------- 240
+H+N+V LLG C G +I E+ G L F+ S C M
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 241 ----EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI 296
+AKG+ +L S +H D+ NILL KI DFGLA+
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 297 VSSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
V AR + ++A E +F+ + + +SDV+S+G+ + EL ++ G+ S+
Sbjct: 225 VVK-GNARLPVKWMAPESIFNCVY---TFESDVWSYGIFLWELFSLGSSPYPGMPVDSK- 279
Query: 356 YFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
Y+ +++ F++L +M + C A P RP +++++++
Sbjct: 280 -----FYKMIKEG--FRMLS-----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 119/256 (46%), Gaps = 65/256 (25%)
Query: 182 LASISRTSHVNVVTLLGFCLEG-----------NNRA------LIYEFMPNGSLEKFVYN 224
+ ++++ HVN+V G C +G ++R+ + EF G+LE+++
Sbjct: 55 VKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 113
Query: 225 GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDF 284
K + L E+ I KG++Y+H S ++++ D+KP NI L KI DF
Sbjct: 114 RRGEKLDKVL----ALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDF 166
Query: 285 GLAKLCTTKKGIVSSLLG------ARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIME 337
GL V+SL ++GT+ Y++ E + S+++G+ + D+Y+ G+++ E
Sbjct: 167 GL----------VTSLKNDGKRXRSKGTLRYMSPEQISSQDYGK---EVDLYALGLILAE 213
Query: 338 LVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQ 397
L+ D+ + S +F R+ + + KKE + +K+ +
Sbjct: 214 LLHV---CDTAFETSK--FFTDL--------RDGIISDIFDKKEKTLLQKL-------LS 253
Query: 398 ARPYDRPPMNEVIEML 413
+P DRP +E++ L
Sbjct: 254 KKPEDRPNTSEILRTL 269
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 33/239 (13%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY-------- 240
+H+N+V LLG C G +I E+ G L F+ S C M
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 241 ----EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI 296
+AKG+ +L S +H D+ NILL KI DFGLA+
Sbjct: 145 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 297 VSSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
V AR + ++A E +F+ + + +SDV+S+G+ + EL ++ G+ S+
Sbjct: 202 VVK-GNARLPVKWMAPESIFNCVY---TFESDVWSYGIFLWELFSLGSSPYPGMPVDSK- 256
Query: 356 YFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
Y+ +++ F++L +M + C A P RP +++++++
Sbjct: 257 -----FYKMIKEG--FRMLS-----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ SH N++ LL +N +L+++FM LE + + ++ K Y ++
Sbjct: 66 LQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHI---KAYMLMT 121
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK 288
+GLEYLH+ ILH D+KP+N+LLD++ K++DFGLAK
Sbjct: 122 --LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 33/239 (13%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY-------- 240
+H+N+V LLG C G +I E+ G L F+ S C M
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 241 ----EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI 296
+AKG+ +L S +H D+ NILL KI DFGLA+
Sbjct: 161 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 297 VSSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
V AR + ++A E +F+ + + +SDV+S+G+ + EL ++ G+ S+
Sbjct: 218 VVK-GNARLPVKWMAPESIFNCVY---TFESDVWSYGIFLWELFSLGSSPYPGMPVDSK- 272
Query: 356 YFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
Y+ +++ F++L +M + C A P RP +++++++
Sbjct: 273 -----FYKMIKEG--FRMLS-----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 84 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 135
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ ++
Sbjct: 136 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 193 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 33/239 (13%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY-------- 240
+H+N+V LLG C G +I E+ G L F+ S C M
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 241 ----EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI 296
+AKG+ +L S +H D+ NILL KI DFGLA+
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 297 VSSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
V AR + ++A E +F+ + + +SDV+S+G+ + EL ++ G+ S+
Sbjct: 225 VVK-GNARLPVKWMAPESIFNCVY---TFESDVWSYGIFLWELFSLGSSPYPGMPVDSK- 279
Query: 356 YFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
Y+ +++ F++L +M + C A P RP +++++++
Sbjct: 280 -----FYKMIKEG--FRMLS-----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 11/147 (7%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V L+G C + L+ E G L KF+ P + E++ ++ G++Y
Sbjct: 398 IVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS-----NVAELLHQVSMGMKY 451
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L +H ++ N+LL KISDFGL+K ++ + + + A
Sbjct: 452 LE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 508
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIMELV 339
E NF + S +SDV+S+G+ + E +
Sbjct: 509 ECI--NFRKFSSRSDVWSYGVTMWEAL 533
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 137
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + S SD+++ G +I +LV
Sbjct: 195 V---GTAQYVSPELLTEKSAXKS--SDLWALGCIIYQLVA 229
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 114
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + C +
Sbjct: 115 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRT 165
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
+L GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 166 TL---SGTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 215
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 216 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 33/239 (13%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY-------- 240
+H+N+V LLG C G +I E+ G L F+ S C M
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 241 ----EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI 296
+AKG+ +L S +H D+ NILL KI DFGLA+
Sbjct: 163 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 219
Query: 297 VSSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
V AR + ++A E +F+ + + +SDV+S+G+ + EL ++ G+ S+
Sbjct: 220 VVK-GNARLPVKWMAPESIFNCVY---TFESDVWSYGIFLWELFSLGSSPYPGMPVDSK- 274
Query: 356 YFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQ 414
Y+ +++ F++L +M + C A P RP +++++++
Sbjct: 275 -----FYKMIKEG--FRMLS-----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 40/246 (16%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ--YLRWEKMYEI 242
IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q L + +
Sbjct: 79 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHV 137
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP------KISDFGLAK----LCTT 292
IA G +YL +H DI N LL CP KI DFG+A+
Sbjct: 138 ARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYY 191
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNS 352
+KG + L + ++ E F G + K+D +SFG+++ E+
Sbjct: 192 RKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIF------------- 231
Query: 353 SEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEM 412
S Y P + + ++ EF G + + C Q +P DRP ++E
Sbjct: 232 SLGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 290
Query: 413 LQGSTE 418
++ T+
Sbjct: 291 IEYCTQ 296
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 40/246 (16%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ--YLRWEKMYEI 242
IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q L + +
Sbjct: 102 ISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHV 160
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP------KISDFGLAK----LCTT 292
IA G +YL +H DI N LL CP KI DFG+A+
Sbjct: 161 ARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYY 214
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNS 352
+KG + L + ++ E F G + K+D +SFG+++ E+
Sbjct: 215 RKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIF------------- 254
Query: 353 SEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEM 412
S Y P + + ++ EF G + + C Q +P DRP ++E
Sbjct: 255 SLGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 313
Query: 413 LQGSTE 418
++ T+
Sbjct: 314 IEYCTQ 319
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 38/229 (16%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN---GDTSKPCQYLRWEKMYEI 242
S H N++ L G+ + LI E+ P G + K + D + Y
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY--------- 118
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
+ +A L Y H S R++H DIKP N+LL KI+DFG + + S
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRXX 170
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
GT+ Y+ E+ + K D++S G++ E + K ++ + Y
Sbjct: 171 LXGTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------Y 220
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 221 KRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 40/246 (16%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ--YLRWEKMYEI 242
IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q L + +
Sbjct: 88 ISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHV 146
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP------KISDFGLAK----LCTT 292
IA G +YL +H DI N LL CP KI DFG+A+
Sbjct: 147 ARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYY 200
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNS 352
+KG + L + ++ E F G + K+D +SFG+++ E+
Sbjct: 201 RKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIF------------- 240
Query: 353 SEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEM 412
S Y P + + ++ EF G + + C Q +P DRP ++E
Sbjct: 241 SLGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 299
Query: 413 LQGSTE 418
++ T+
Sbjct: 300 IEYCTQ 305
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 40/246 (16%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ--YLRWEKMYEI 242
IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q L + +
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHV 145
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP------KISDFGLAK----LCTT 292
IA G +YL +H DI N LL CP KI DFG+A+
Sbjct: 146 ARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYY 199
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNS 352
+KG + L + ++ E F G + K+D +SFG+++ E+
Sbjct: 200 RKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIF------------- 239
Query: 353 SEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEM 412
S Y P + + ++ EF G + + C Q +P DRP ++E
Sbjct: 240 SLGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 298
Query: 413 LQGSTE 418
++ T+
Sbjct: 299 IEYCTQ 304
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 64 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 115
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 116 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 173 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 207
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 27/149 (18%)
Query: 208 LIYEFMPNGSLEKFV--YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLH----RGCSTR- 260
L+ E+ PNGSL K++ + D C+ + + +GL YLH RG +
Sbjct: 89 LVMEYYPNGSLXKYLSLHTSDWVSSCR---------LAHSVTRGLAYLHTELPRGDHYKP 139
Query: 261 -ILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIV-----SSLLGARGTIGYIALEV 314
I H D+ N+L+ D ISDFGL+ T + + ++ + GTI Y+A EV
Sbjct: 140 AISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEV 199
Query: 315 FS-----RNFGEVSHKSDVYSFGMMIMEL 338
R+ + D+Y+ G++ E+
Sbjct: 200 LEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 40/246 (16%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ--YLRWEKMYEI 242
IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q L + +
Sbjct: 102 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHV 160
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP------KISDFGLAK----LCTT 292
IA G +YL +H DI N LL CP KI DFG+A+
Sbjct: 161 ARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYY 214
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNS 352
+KG + L + ++ E F G + K+D +SFG+++ E+
Sbjct: 215 RKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIF------------- 254
Query: 353 SEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEM 412
S Y P + + ++ EF G + + C Q +P DRP ++E
Sbjct: 255 SLGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 313
Query: 413 LQGSTE 418
++ T+
Sbjct: 314 IEYCTQ 319
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 63 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 114
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 115 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 172 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 206
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 89 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 140
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 141 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 197
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 198 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 232
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 38/229 (16%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN---GDTSKPCQYLRWEKMYEI 242
S H N++ L G+ + LI E+ P G + K + D + Y
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY--------- 118
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC--- 172
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
GT+ Y+ E+ + K D++S G++ E + K ++ + Y
Sbjct: 173 --GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------Y 220
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 221 KRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-----------YNGDTSKPCQYLRWE 237
H N+V LLG C G +I E+ G L F+ YN + P + L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYN-PSHNPEEQLSSR 166
Query: 238 KMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK-LCTTKKGI 296
+ +A+G+ +L S +H D+ N+LL KI DFGLA+ + I
Sbjct: 167 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 223
Query: 297 VSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
V AR + ++A E V +SDV+S+G+++ E+ N G+ +S+ Y
Sbjct: 224 VKG--NARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 279
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 40/246 (16%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ--YLRWEKMYEI 242
IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q L + +
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHV 145
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP------KISDFGLAK----LCTT 292
IA G +YL +H DI N LL CP KI DFG+A+
Sbjct: 146 ARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYY 199
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNS 352
+KG + L + ++ E F G + K+D +SFG+++ E+
Sbjct: 200 RKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIF------------- 239
Query: 353 SEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEM 412
S Y P + + ++ EF G + + C Q +P DRP ++E
Sbjct: 240 SLGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 298
Query: 413 LQGSTE 418
++ T+
Sbjct: 299 IEYCTQ 304
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 84 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 135
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 136 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 193 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 84 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 135
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 136 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 193 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 24/161 (14%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWE--KMYEIVIG-- 245
H N+V LG E + E +P GSL + + +W K E IG
Sbjct: 78 HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS----------KWGPLKDNEQTIGFY 127
Query: 246 ---IAKGLEYLHRGCSTRILHFDIKPHNILLDQ-DFCPKISDFGLAKLCTTKKGIVSSLL 301
I +GL+YLH +I+H DIK N+L++ KISDFG +K GI
Sbjct: 128 TKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA---GINPCTE 181
Query: 302 GARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
GT+ Y+A E+ + +D++S G I+E+ K
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 84 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 135
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 136 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 193 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 137
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 195 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 62 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 113
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 114 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 171 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 205
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 61 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 112
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 113 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 170 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 204
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 40/246 (16%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ--YLRWEKMYEI 242
IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q L + +
Sbjct: 88 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHV 146
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP------KISDFGLA----KLCTT 292
IA G +YL +H DI N LL CP KI DFG+A +
Sbjct: 147 ARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMAQDIYRASYY 200
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNS 352
+KG + L + ++ E F G + K+D +SFG+++ E+
Sbjct: 201 RKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIF------------- 240
Query: 353 SEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEM 412
S Y P + + ++ EF G + + C Q +P DRP ++E
Sbjct: 241 SLGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 299
Query: 413 LQGSTE 418
++ T+
Sbjct: 300 IEYCTQ 305
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLA---------KLCTT 292
I I IA+ +E+LH S ++H D+KP NI D K+ DFGL + T
Sbjct: 169 IFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
++ G GT Y++ E N SHK D++S G+++ EL+
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGN--NYSHKVDIFSLGLILFELL 270
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 87 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 138
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 139 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 196 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 137
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 195 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 137
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 195 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 137
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 195 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY----------NGDTSKPCQYLR 235
+R H NVV LLG + ++I+ + +G L +F+ D L
Sbjct: 67 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 126
Query: 236 WEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTK-- 293
+V IA G+EYL S ++H D+ N+L+ KISD GL +
Sbjct: 127 PPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADY 183
Query: 294 -KGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
K + +SLL R ++A E +G+ S SD++S+G+++ E+
Sbjct: 184 YKLLGNSLLPIR----WMAPEAIM--YGKFSIDSDIWSYGVVLWEV 223
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY----------NGDTSKPCQYLR 235
+R H NVV LLG + ++I+ + +G L +F+ D L
Sbjct: 84 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 143
Query: 236 WEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTK-- 293
+V IA G+EYL S ++H D+ N+L+ KISD GL +
Sbjct: 144 PPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADY 200
Query: 294 -KGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
K + +SLL R ++A E +G+ S SD++S+G+++ E+
Sbjct: 201 YKLLGNSLLPIR----WMAPEAIM--YGKFSIDSDIWSYGVVLWEV 240
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 40/246 (16%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ--YLRWEKMYEI 242
IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q L + +
Sbjct: 102 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHV 160
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP------KISDFGLAK----LCTT 292
IA G +YL +H DI N LL CP KI DFG+A+
Sbjct: 161 ARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYY 214
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNS 352
+KG + L + ++ E F G + K+D +SFG+++ E+
Sbjct: 215 RKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIF------------- 254
Query: 353 SEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEM 412
S Y P + + ++ EF G + + C Q +P DRP ++E
Sbjct: 255 SLGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 313
Query: 413 LQGSTE 418
++ T+
Sbjct: 314 IEYCTQ 319
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 40/246 (16%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ--YLRWEKMYEI 242
IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q L + +
Sbjct: 88 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHV 146
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP------KISDFGLAK----LCTT 292
IA G +YL +H DI N LL CP KI DFG+A+
Sbjct: 147 ARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYY 200
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNS 352
+KG + L + ++ E F G + K+D +SFG+++ E+
Sbjct: 201 RKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIF------------- 240
Query: 353 SEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEM 412
S Y P + + ++ EF G + + C Q +P DRP ++E
Sbjct: 241 SLGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 299
Query: 413 LQGSTE 418
++ T+
Sbjct: 300 IEYCTQ 305
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 33/199 (16%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT---TKKGIVSSLLG 302
I G +YLHR R++H D+K N+ L++D KI DFGLA +K ++
Sbjct: 124 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---- 176
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIY 362
GT YIA EV S+ S + DV+S G ++ L+ K ++ + Y
Sbjct: 177 --GTPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET--------Y 224
Query: 363 RHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI--EMLQGSTEAL 420
++++ E+ + K N +A +I +Q P RP +NE++ E
Sbjct: 225 LRIKKN-EYS----IPKHINPVAASLI---QKMLQTDPTARPTINELLNDEFFTSGYIPA 276
Query: 421 QIPPTPFLSSPPRASIDSS 439
++P T L+ PPR SI S
Sbjct: 277 RLPIT-CLTIPPRFSIAPS 294
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 32/242 (13%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ--YLRWEKMYEI 242
IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q L + +
Sbjct: 128 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHV 186
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP------KISDFGLAKLCTTKKGI 296
IA G +YL +H DI N LL CP KI DFG+A+ + G
Sbjct: 187 ARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMAR-DIYRAGY 239
Query: 297 VSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
A + ++ E F G + K+D +SFG+++ E+ S Y
Sbjct: 240 YRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGY 284
Query: 357 FPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGS 416
P + + ++ EF G + + C Q +P DRP ++E ++
Sbjct: 285 MP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343
Query: 417 TE 418
T+
Sbjct: 344 TQ 345
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 27/198 (13%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I G +YLHR R++H D+K N+ L++D KI DFGLA +L G
Sbjct: 126 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC---G 179
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHV 365
T YIA EV S+ S + DV+S G ++ L+ K ++ + Y +
Sbjct: 180 TPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET--------YLRI 229
Query: 366 EQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI--EMLQGSTEALQIP 423
+++ E+ + K N +A +I +Q P RP +NE++ E ++P
Sbjct: 230 KKN-EYS----IPKHINPVAASLI---QKMLQTDPTARPTINELLNDEFFTSGYIPARLP 281
Query: 424 PTPFLSSPPRASIDSSTL 441
T L+ PP SI S+L
Sbjct: 282 IT-CLTIPPXFSIAPSSL 298
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 40/246 (16%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ--YLRWEKMYEI 242
IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q L + +
Sbjct: 94 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHV 152
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP------KISDFGLAK----LCTT 292
IA G +YL +H DI N LL CP KI DFG+A+
Sbjct: 153 ARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYY 206
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNS 352
+KG + L + ++ E F G + K+D +SFG+++ E+
Sbjct: 207 RKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIF------------- 246
Query: 353 SEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEM 412
S Y P + + ++ EF G + + C Q +P DRP ++E
Sbjct: 247 SLGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 305
Query: 413 LQGSTE 418
++ T+
Sbjct: 306 IEYCTQ 311
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 16/157 (10%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
+A + + H NVV L+ + N L ++E + G V T KP +
Sbjct: 87 IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP----VMEVPTLKPLSEDQARFY 142
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ +I KG+EYLH +I+H DIKP N+L+ +D KI+DFG++ ++S+
Sbjct: 143 FQDLI---KGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN 196
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKS-DVYSFGMMI 335
+ GT ++A E S S K+ DV++ G+ +
Sbjct: 197 TV---GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 83 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 134
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 135 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 191
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 192 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 226
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 32/242 (13%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ--YLRWEKMYEI 242
IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q L + +
Sbjct: 105 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHV 163
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP------KISDFGLAKLCTTKKGI 296
IA G +YL +H DI N LL CP KI DFG+A+ + G
Sbjct: 164 ARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARD-IYRAGY 216
Query: 297 VSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
A + ++ E F G + K+D +SFG+++ E+ S Y
Sbjct: 217 YRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGY 261
Query: 357 FPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGS 416
P + + ++ EF G + + C Q +P DRP ++E ++
Sbjct: 262 MP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 320
Query: 417 TE 418
T+
Sbjct: 321 TQ 322
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 68 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 119
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT--TKKGIVSSL 300
I LEYLH I+H D+KP NILL++D +I+DFG AK+ + +K+ +
Sbjct: 120 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 176
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT Y++ E+ + SD+++ G +I +LV
Sbjct: 177 V---GTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 211
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 117
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 118 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 170
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 171 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 218
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 219 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 260
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 110
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 111 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 163
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 164 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 211
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 212 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 253
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 112
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 113 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 165
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 166 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 213
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 214 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 255
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 40/246 (16%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ--YLRWEKMYEI 242
IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q L + +
Sbjct: 104 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHV 162
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP------KISDFGLAK----LCTT 292
IA G +YL +H DI N LL CP KI DFG+A+
Sbjct: 163 ARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYY 216
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNS 352
+KG + L + ++ E F G + K+D +SFG+++ E+
Sbjct: 217 RKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIF------------- 256
Query: 353 SEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEM 412
S Y P + + ++ EF G + + C Q +P DRP ++E
Sbjct: 257 SLGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 315
Query: 413 LQGSTE 418
++ T+
Sbjct: 316 IEYCTQ 321
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ H NV+TL + LI E + G L F+ ++ L E+ E +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLK 121
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSL 300
I G+ YLH S +I HFD+KP NI+L P KI DFGLA K +
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEF 174
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 175 KNIFGTPAFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 113
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 114 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL 166
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 167 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 214
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 215 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 14/152 (9%)
Query: 190 HVNVVTLLGFCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
H +++ G C + ++L + E++P GSL ++ P + ++ I
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------PRHSIGLAQLLLFAQQIC 127
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
+G+ YLH S +H ++ N+LLD D KI DFGLAK +
Sbjct: 128 EGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 184
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ A E + + SDV+SFG+ + EL+
Sbjct: 185 FWYAPECLKEY--KFYYASDVWSFGVTLYELL 214
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 24/166 (14%)
Query: 189 SHVNVVTLLGFCLE----GNNRALIYEFMPNGSL----EKFVYNGDTSKPCQYLRWEKMY 240
+H N++ L+ +CL + L+ F G+L E+ G+ +L +++
Sbjct: 84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN------FLTEDQIL 137
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFG-LAKLCTTKKGIVSS 299
+++GI +GLE +H + H D+KP NILL + P + D G + + C +G +
Sbjct: 138 WLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQA 194
Query: 300 LL-----GARGTIGYIALEVFS-RNFGEVSHKSDVYSFGMMIMELV 339
L R TI Y A E+FS ++ + ++DV+S G ++ ++
Sbjct: 195 LTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 18/170 (10%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H N++TL +G ++ E M G L + ++ + ++ I K
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ------KFFSEREASAVLFTITK 127
Query: 249 GLEYLHRGCSTRILHFDIKPHNIL-LDQDFCP---KISDFGLAKLCTTKKGIVSSLLGAR 304
+EYLH + ++H D+KP NIL +D+ P +I DFG AK + G+ L+
Sbjct: 128 TVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL---LMTPC 181
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
T ++A EV R + + D++S G+++ ++ +G D++ E
Sbjct: 182 YTANFVAPEVLERQGYDAA--CDIWSLGVLLYTMLTGYTPFANGPDDTPE 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 140
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA + + G
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA------RHTADEMTGYVA 191
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 192 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 224
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 113
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 114 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 166
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 167 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 214
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 215 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 138
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTD------DEMTGYVA 189
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
T Y A E+ N+ + D++S G ++ EL+ +
Sbjct: 190 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 138
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTD------DEMTGYVA 189
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
T Y A E+ N+ + D++S G ++ EL+ +
Sbjct: 190 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS------- 298
I + L Y+H S I+H ++KP NI +D+ KI DFGLAK I+
Sbjct: 125 ILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 299 ----SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+L A GT Y+A EV G + K D YS G++ E +
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLD-GTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWE--KMYEIVIG- 245
H N+V LG E + E +P GSL + + +W K E IG
Sbjct: 63 KHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS----------KWGPLKDNEQTIGF 112
Query: 246 ----IAKGLEYLHRGCSTRILHFDIKPHNILLDQ-DFCPKISDFGLAKLCTTKKGIVSSL 300
I +GL+YLH +I+H DIK N+L++ KISDFG +K GI
Sbjct: 113 YTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA---GINPCT 166
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
GT+ Y+A E+ + +D++S G I+E+ K
Sbjct: 167 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 30/169 (17%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN---GDTSKPCQ-----YLRW 236
+ H N+V L N L++EFM N L+K++ + G+T + + Y +W
Sbjct: 57 MKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQW 115
Query: 237 EKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI 296
+ + +GL + H +ILH D+KP N+L+++ K+ DFGLA+ GI
Sbjct: 116 Q--------LLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAF----GI 160
Query: 297 -VSSLLGARGTIGYIALEVF--SRNFGEVSHKSDVYSFGMMIMELVGCK 342
V++ T+ Y A +V SR + S D++S G ++ E++ K
Sbjct: 161 PVNTFSSEVVTLWYRAPDVLMGSRTY---STSIDIWSCGCILAEMITGK 206
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGXVA 184
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 32/172 (18%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PC 231
L + H NV+ LL F P SLE+F VY D + C
Sbjct: 83 LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 130
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q L + + ++ I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTD 187
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
+ G T Y A E+ N+ + D++S G ++ EL+ +
Sbjct: 188 ------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 140
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA + + G
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA------RHTADEMTGYVA 191
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 192 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 224
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 194 VTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIV 243
+ LL N L+ F P S+E F VY D + CQ L E + +V
Sbjct: 78 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLV 137
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
+ +GL+Y+H S I+H D+KP N+ +++D +I DFGLA+ + + G
Sbjct: 138 YQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE------MTGY 188
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
T Y A E+ N+ + D++S G ++ EL+ K
Sbjct: 189 VATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 140
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA + + G
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA------RHTADEMTGYVA 191
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 192 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 224
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 14/152 (9%)
Query: 190 HVNVVTLLGFCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
H +++ G C + +L + E++P GSL ++ P + ++ I
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-------PRHSIGLAQLLLFAQQIC 144
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
+G+ YLH + +H D+ N+LLD D KI DFGLAK +
Sbjct: 145 EGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV 201
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ A E + + SDV+SFG+ + EL+
Sbjct: 202 FWYAPECLKEY--KFYYASDVWSFGVTLYELL 231
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 116
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 117 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 169
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 170 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 217
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 218 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 113
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 114 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXL 166
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 167 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 214
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 215 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 74/178 (41%), Gaps = 23/178 (12%)
Query: 189 SHVNVVTLLGFCLEGNNRA----LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
H N++ + G+N LI F GSL ++ + W ++ +
Sbjct: 67 KHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKG-------NIITWNELCHVAE 119
Query: 245 GIAKGLEYLHR--------GCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI 296
+++GL YLH G I H D K N+LL D ++DFGLA K
Sbjct: 120 TMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKP- 178
Query: 297 VSSLLGARGTIGYIALEVF--SRNFGEVSH-KSDVYSFGMMIMELVGCKNNLDSGVDN 351
G GT Y+A EV + NF + + D+Y+ G+++ ELV D VD
Sbjct: 179 PGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDE 236
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 40/246 (16%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ--YLRWEKMYEI 242
IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q L + +
Sbjct: 114 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHV 172
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP------KISDFGLAK----LCTT 292
IA G +YL +H DI N LL CP KI DFG+A+
Sbjct: 173 ARDIACGCQYLE---ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYY 226
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNS 352
+KG + L + ++ E F G + K+D +SFG+++ E+
Sbjct: 227 RKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIF------------- 266
Query: 353 SEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEM 412
S Y P + + ++ EF G + + C Q +P DRP ++E
Sbjct: 267 SLGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 325
Query: 413 LQGSTE 418
++ T+
Sbjct: 326 IEYCTQ 331
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 194 VTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIV 243
+ LL N L+ F P S+E F VY D + CQ L E + +V
Sbjct: 70 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLV 129
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
+ +GL+Y+H S I+H D+KP N+ +++D +I DFGLA+ + + G
Sbjct: 130 YQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE------MTGY 180
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
T Y A E+ N+ + D++S G ++ EL+ K
Sbjct: 181 VATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 116
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 117 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL 169
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 170 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 217
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 218 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 16/145 (11%)
Query: 199 FCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRG 256
FC +++ L + E+MP G L + N D + +W K Y + +A L+ +H
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE-----KWAKFYTAEVVLA--LDAIH-- 191
Query: 257 CSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFS 316
S ++H D+KP N+LLD+ K++DFG + + G+V A GT YI+ EV
Sbjct: 192 -SMGLIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGMVHCDT-AVGTPDYISPEVLK 248
Query: 317 RNFGE--VSHKSDVYSFGMMIMELV 339
G+ + D +S G+ + E++
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEML 273
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 194 VTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIV 243
+ LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 151
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + + G
Sbjct: 152 YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MXGX 202
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 203 VATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 237
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 135
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + + G
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE------MTGYVA 186
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
T Y A E+ N+ + D++S G ++ EL+ +
Sbjct: 187 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-------YNGDTSKPCQYLRWEKMYE 241
H N+V LLG C G +I E+ G L F+ + + +P L +
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP---LELRDLLH 156
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK-LCTTKKGIVSSL 300
+A+G+ +L S +H D+ N+LL KI DFGLA+ + IV
Sbjct: 157 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG- 212
Query: 301 LGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
AR + ++A E +F + + +SDV+S+G+++ E+ N G+ +S+ Y
Sbjct: 213 -NARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 265
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 139
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + + G
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE------MTGYVA 190
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
T Y A E+ N+ + D++S G ++ EL+ +
Sbjct: 191 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 116
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 117 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 169
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 170 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 217
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 218 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 118
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 119 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 171
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 172 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 219
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 220 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 113
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 114 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 166
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 167 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 214
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 215 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ H NV+TL + LI E + G L F+ ++ L E+ E +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLK 121
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSL 300
I G+ YLH S +I HFD+KP NI+L P KI DFGLA K +
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEF 174
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 175 KNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+MP G L + N D + +W + Y + +A L+ +H S +H D+K
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPE-----KWARFYTAEVVLA--LDAIH---SMGFIHRDVK 200
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGE--VSHK 325
P N+LLD+ K++DFG + K+G+V A GT YI+ EV G+ +
Sbjct: 201 PDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 326 SDVYSFGMMIMELV 339
D +S G+ + E++
Sbjct: 259 CDWWSVGVFLYEML 272
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ H NV+TL + LI E + G L F+ ++ L E+ E +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLK 121
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSL 300
I G+ YLH S +I HFD+KP NI+L P KI DFGLA K +
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEF 174
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 175 KNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ H NV+TL + LI E + G L F+ ++ L E+ E +
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLK 120
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSL 300
I G+ YLH S +I HFD+KP NI+L P KI DFGLA K +
Sbjct: 121 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEF 173
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 174 KNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 205
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN----------GDTSKPCQYL 234
++ H ++V G C EG +++E+M +G L +F+ + G+ P L
Sbjct: 74 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP-L 132
Query: 235 RWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKK 294
++ + +A G+ YL +H D+ N L+ Q KI DFG+++ +
Sbjct: 133 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 189
Query: 295 GIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
+G R + + S + + + +SDV+SFG+++ E+
Sbjct: 190 ---YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI 230
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+MP G L + N D + +W + Y + +A L+ +H S +H D+K
Sbjct: 146 MVMEYMPGGDLVNLMSNYDVPE-----KWARFYTAEVVLA--LDAIH---SMGFIHRDVK 195
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGE--VSHK 325
P N+LLD+ K++DFG + K+G+V A GT YI+ EV G+ +
Sbjct: 196 PDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGYYGRE 253
Query: 326 SDVYSFGMMIMELV 339
D +S G+ + E++
Sbjct: 254 CDWWSVGVFLYEML 267
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-------YNGDTSKPCQYLRWEKMYE 241
H N+V LLG C G +I E+ G L F+ + + +P L +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP---LELRDLLH 164
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK-LCTTKKGIVSSL 300
+A+G+ +L S +H D+ N+LL KI DFGLA+ + IV
Sbjct: 165 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG- 220
Query: 301 LGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
AR + ++A E +F + + +SDV+S+G+++ E+ N G+ +S+ Y
Sbjct: 221 -NARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 273
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ H NV+TL + LI E + G L F+ ++ L E+ E +
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLK 120
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSL 300
I G+ YLH S +I HFD+KP NI+L P KI DFGLA K +
Sbjct: 121 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEF 173
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 174 KNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 205
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 231 CQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC 290
CQ+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 122 CQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178
Query: 291 TTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN----------GDTSKPCQYL 234
++ H ++V G C EG +++E+M +G L +F+ + G+ P L
Sbjct: 68 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP-L 126
Query: 235 RWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKK 294
++ + +A G+ YL +H D+ N L+ Q KI DFG+++ +
Sbjct: 127 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 183
Query: 295 GIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
+G R + + S + + + +SDV+SFG+++ E+
Sbjct: 184 ---YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI 224
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ H NV+TL + LI E + G L F+ ++ L E+ E +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLK 121
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSL 300
I G+ YLH S +I HFD+KP NI+L P KI DFGLA K +
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEF 174
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 175 KNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V AR
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK-GDARL 264
Query: 306 TIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
+ ++A E +F R + + +SDV+SFG+++ E+ + GV E R
Sbjct: 265 PLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRR 315
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTEA 419
+++ G + + +M L C P RP +E++E L +A
Sbjct: 316 LKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 363
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ H NV+TL + LI E + G L F+ ++ L E+ E +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLK 121
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSL 300
I G+ YLH S +I HFD+KP NI+L P KI DFGLA K +
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEF 174
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 175 KNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 129
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 180
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 181 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 213
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V AR
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK-GDARL 262
Query: 306 TIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
+ ++A E +F R + + +SDV+SFG+++ E+ + GV E R
Sbjct: 263 PLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRR 313
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTEA 419
+++ G + + +M L C P RP +E++E L +A
Sbjct: 314 LKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 361
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 32/168 (19%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PC 231
L + H NV+ LL F P SLE+F VY D + C
Sbjct: 72 LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q L + + ++ I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ + G T Y A E+ N+ + D++S G ++ EL+
Sbjct: 177 DE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PC 231
L + H NV+ LL F P SLE+F VY D + C
Sbjct: 82 LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 129
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q L + + ++ I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+
Sbjct: 130 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 186
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ G T Y A E+ N+ + D++S G ++ EL+
Sbjct: 187 ------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 227
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 71 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 130
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 131 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 181
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 182 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 214
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 20/156 (12%)
Query: 194 VTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIV 243
+ LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 138 YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGY 188
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 189 VATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 184
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 135
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + + G
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MTGYVA 186
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 187 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 219
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V AR
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK-GDARL 257
Query: 306 TIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
+ ++A E +F R + + +SDV+SFG+++ E+ + GV E R
Sbjct: 258 PLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRR 308
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTEA 419
+++ G + + +M L C P RP +E++E L +A
Sbjct: 309 LKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 184
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 106
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 107 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 161 THEVVTLWYRAPEIL-LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 139
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + + G
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MTGYVA 190
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 191 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ H NV+TL + LI E + G L F+ ++ L E+ E +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLK 121
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSL 300
I G+ YLH S +I HFD+KP NI+L P KI DFGLA K +
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEF 174
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 175 KNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PC 231
L + H NV+ LL F P SLE+F VY D + C
Sbjct: 77 LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 124
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q L + + ++ I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 181
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ G T Y A E+ N+ + D++S G ++ EL+
Sbjct: 182 ------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 71 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 130
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 131 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 181
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 182 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 214
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PC 231
L + H NV+ LL F P SLE+F VY D + C
Sbjct: 71 LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 118
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q L + + ++ I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+
Sbjct: 119 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 175
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ G T Y A E+ N+ + D++S G ++ EL+
Sbjct: 176 ------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 216
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E+MP G L + N D + +W + Y + +A L+ +H S +H D+K
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPE-----KWARFYTAEVVLA--LDAIH---SMGFIHRDVK 200
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGE--VSHK 325
P N+LLD+ K++DFG + K+G+V A GT YI+ EV G+ +
Sbjct: 201 PDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 326 SDVYSFGMMIMELV 339
D +S G+ + E++
Sbjct: 259 CDWWSVGVFLYEML 272
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 140
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 191
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 192 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 224
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 129
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 180
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 181 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 213
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
+AKG+E+L S + +H D+ NILL + KI DFGLA+ V AR
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK-GDARL 255
Query: 306 TIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
+ ++A E +F R + + +SDV+SFG+++ E+ + GV E R
Sbjct: 256 PLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRR 306
Query: 365 VEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIEMLQGSTEA 419
+++ G + + +M L C P RP +E++E L +A
Sbjct: 307 LKE-------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 354
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 14/152 (9%)
Query: 190 HVNVVTLLGFCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
H +++ G C + ++L + E++P GSL ++ P + ++ I
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------PRHSIGLAQLLLFAQQIC 127
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
+G+ YLH + +H ++ N+LLD D KI DFGLAK +
Sbjct: 128 EGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 184
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ A E + + SDV+SFG+ + EL+
Sbjct: 185 FWYAPECLKEY--KFYYASDVWSFGVTLYELL 214
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 184
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ H NV+TL + LI E + G L F+ ++ L E+ E +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLK 121
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSL 300
I G+ YLH S +I HFD+KP NI+L P KI DFGLA K +
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEF 174
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 175 KNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN----------GDTSKPCQYL 234
++ H ++V G C EG +++E+M +G L +F+ + G+ P L
Sbjct: 97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP-L 155
Query: 235 RWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKK 294
++ + +A G+ YL +H D+ N L+ Q KI DFG+++ +
Sbjct: 156 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 212
Query: 295 GIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
+G R + + S + + + +SDV+SFG+++ E+
Sbjct: 213 ---YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI 253
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 116
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 117 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 169
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 170 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 217
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 218 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 184
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 184
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PC 231
L + H NV+ LL F P SLE+F VY D + C
Sbjct: 72 LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q L + + ++ I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ G T Y A E+ N+ + D++S G ++ EL+
Sbjct: 177 ------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 145
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + + G
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MTGYVA 196
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 197 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 229
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 32/168 (19%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PC 231
L + H NV+ LL F P SLE+F VY D + C
Sbjct: 95 LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 142
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q L + + ++ I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 199
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ + G T Y A E+ N+ + D++S G ++ EL+
Sbjct: 200 DE------MXGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 32/168 (19%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PC 231
L + H NV+ LL F P SLE+F VY D + C
Sbjct: 95 LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 142
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q L + + ++ I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 199
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ + G T Y A E+ N+ + D++S G ++ EL+
Sbjct: 200 DE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 240
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 135
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 186
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 187 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 219
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 20/156 (12%)
Query: 194 VTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIV 243
+ LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 138 YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGY 188
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 189 VATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 145
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + + G
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MTGYVA 196
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 197 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 229
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 194 VTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIV 243
+ LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 91 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 150
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + + G
Sbjct: 151 YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MTGY 201
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 202 VATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 236
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 138
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 189
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 190 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 222
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ H NV+TL + LI E + G L F+ ++ L E+ E +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLK 121
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSL 300
I G+ YLH S +I HFD+KP NI+L P KI DFGLA K +
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEF 174
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 175 KNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 72 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 131
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 132 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 182
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 183 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 215
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 184
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 194 VTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIV 243
+ LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 151
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + + G
Sbjct: 152 YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MTGY 202
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 203 VATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 237
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 145
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + + G
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MTGYVA 196
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 197 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 229
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMY 240
+A + + H N+V L G + LI + + G L ++ V G +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-------FYTERDAS 119
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNIL---LDQDFCPKISDFGLAKLCTTKKGIV 297
++ + ++YLH I+H D+KP N+L LD+D ISDFGL+K+
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---- 172
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
S L A GT GY+A EV ++ S D +S G++
Sbjct: 173 SVLSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 135
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + + G
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MTGYVA 186
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 187 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 219
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 113
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 114 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL 166
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 167 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 214
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 215 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 139
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 140 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 192
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 193 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 240
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 241 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 282
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ H NV+TL + LI E + G L F+ ++ L E+ E +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLK 121
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSL 300
I G+ YLH S +I HFD+KP NI+L P KI DFGLA K +
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEF 174
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 175 KNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 113
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 114 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 167
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 168 THEVVTLWYRAPEIL-LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 224
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
+A L++LH S I++ D+KP NILLD++ K++DFGL+K + S G
Sbjct: 135 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC---G 188
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T+ Y+A EV +R + +D +SFG+++ E++
Sbjct: 189 TVEYMAPEVVNRRGH--TQSADWWSFGVLMFEML 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PC 231
L + H NV+ LL F P SLE+F VY D + C
Sbjct: 83 LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 130
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q L + + ++ I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 187
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ G T Y A E+ N+ + D++S G ++ EL+
Sbjct: 188 ------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 228
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 93 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 152
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + + G
Sbjct: 153 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MTGYVA 203
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 204 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 236
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 32/168 (19%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PC 231
L + H NV+ LL F P SLE+F VY D + C
Sbjct: 72 LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q L + + ++ I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ + G T Y A E+ N+ + D++S G ++ EL+
Sbjct: 177 DE------MAGFVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 94 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 153
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + + G
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MTGYVA 204
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 205 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 237
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + + G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MAGFVA 184
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 115
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 116 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 168
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 169 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 216
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 217 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 258
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 129
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMAGFVA 180
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 181 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 213
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 113
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + S
Sbjct: 114 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----S 161
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 162 RRTDLCGTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 214
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 215 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 8/94 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
+A L++LH S I++ D+KP NILLD++ K++DFGL+K + S G
Sbjct: 136 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC---G 189
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T+ Y+A EV +R G + +D +SFG+++ E++
Sbjct: 190 TVEYMAPEVVNRR-GH-TQSADWWSFGVLMFEML 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 8/94 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
+A L++LH S I++ D+KP NILLD++ K++DFGL+K + S G
Sbjct: 135 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC---G 188
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T+ Y+A EV +R G + +D +SFG+++ E++
Sbjct: 189 TVEYMAPEVVNRR-GH-TQSADWWSFGVLMFEML 220
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ H NV+TL + LI E + G L F+ ++ L E+ E +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLK 121
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSL 300
I G+ YLH S +I HFD+KP NI+L P KI DFGLA K +
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEF 174
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 175 KNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMY 240
+A + + H N+V L G + LI + + G L ++ V G +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-------FYTERDAS 119
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNIL---LDQDFCPKISDFGLAKLCTTKKGIV 297
++ + ++YLH I+H D+KP N+L LD+D ISDFGL+K+
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---- 172
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
S L A GT GY+A EV ++ S D +S G++
Sbjct: 173 SVLSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
LEYLH S I++ D+KP NILLD++ KI+DFG AK V+ L GT
Sbjct: 118 ALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLC--GTPD 168
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
YIA EV S + D +SFG++I E++
Sbjct: 169 YIAPEVVSTK--PYNKSIDWWSFGILIYEMLA 198
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 114
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + S
Sbjct: 115 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----S 162
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 163 RRTDLCGTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 215
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 216 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 96/234 (41%), Gaps = 48/234 (20%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 118
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 119 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 171
Query: 299 SLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
GT+ Y+ E + R E K D++S G++ E + K ++ +
Sbjct: 172 C-----GTLDYLPPEXIEGRXHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQET---- 219
Query: 358 PHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 220 ----YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPXLREVLE 261
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMY 240
+A + + H N+V L G + LI + + G L ++ V G +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-------FYTERDAS 119
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNIL---LDQDFCPKISDFGLAKLCTTKKGIV 297
++ + ++YLH I+H D+KP N+L LD+D ISDFGL+K+
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---- 172
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
S L A GT GY+A EV ++ S D +S G++
Sbjct: 173 SVLSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 114
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 115 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTL 167
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 168 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 215
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 216 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 113
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + S
Sbjct: 114 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----S 161
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 162 RRTDLCGTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 214
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 215 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
V G L+G+ +I E++ GS + G P + M + ++ KGL+Y
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG----PFDEFQIATMLKEIL---KGLDY 135
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
LH S + +H DIK N+LL + K++DFG+A T + ++ + GT ++A
Sbjct: 136 LH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV---GTPFWMAP 189
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIMELV 339
EV ++ K+D++S G+ +EL
Sbjct: 190 EVIQQS--AYDSKADIWSLGITAIELA 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMY 240
+A + + H N+V L G + LI + + G L ++ V G +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-------FYTERDAS 119
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNIL---LDQDFCPKISDFGLAKLCTTKKGIV 297
++ + ++YLH I+H D+KP N+L LD+D ISDFGL+K+
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---- 172
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
S L A GT GY+A EV ++ S D +S G++
Sbjct: 173 SVLSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 118
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + S
Sbjct: 119 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----S 166
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 167 RRTDLCGTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 219
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 220 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 103 LLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 162
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + + G
Sbjct: 163 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MTGYVA 213
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
T Y A E+ N+ + D++S G ++ EL+ + L G D+ +++
Sbjct: 214 TRWYRAPEIM-LNWMHYNMTVDIWSVGCIMAELLTGR-TLFPGTDHINQL 261
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ H NV+TL + LI E + G L F+ ++ L E+ E +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES------LTEEEATEFLK 121
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSL 300
I G+ YLH S +I HFD+KP NI+L P KI DFGLA K +
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEF 174
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 175 KNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 106
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 107 SYLFQLLQGLSFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 161 THEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 130
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + +
Sbjct: 131 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 183
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 184 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 231
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 232 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 273
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 109
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 110 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 163
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 164 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 108
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 109 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 162
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 163 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 110
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 111 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 164
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 165 THEVVTLWYRAPEILL-GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 221
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 106
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 107 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 161 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 105
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 106 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 159
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 160 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 105
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 106 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 159
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 160 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 108
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 109 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 162
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 163 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGS-LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H N++TL +G + L+ E M G L+K + ++ + ++ I K
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ-------KFFSEREASFVLHTIGK 132
Query: 249 GLEYLHRGCSTRILHFDIKPHNIL-LDQDF---CPKISDFGLAKLCTTKKGIVSSLLGAR 304
+EYLH S ++H D+KP NIL +D+ C +I DFG AK + G+ L+
Sbjct: 133 TVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL---LMTPC 186
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
T ++A EV R D++S G+++ ++ +G ++ E
Sbjct: 187 YTANFVAPEVLKRQ--GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE 234
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 106
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 107 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 161 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ H NV+TL + LI E + G L F+ ++ L E+ E +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLK 121
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSL 300
I G+ YLH S +I HFD+KP NI+L P KI DFGLA K +
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEF 174
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 175 KNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 106
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 107 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 161 THEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 109
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 110 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 163
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 164 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 105
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 106 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 159
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 160 THEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 107
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 108 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 161
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 162 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 106
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 107 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 161 THEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 105
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 106 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 159
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 160 THEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 105
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 106 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 159
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 160 THEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 107
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 108 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 161
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 162 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 106
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 107 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 161 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 113
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 114 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 167
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 168 THEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 224
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 110
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 111 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 164
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 165 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 221
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 116
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + S
Sbjct: 117 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----S 164
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 165 RRDDLCGTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 217
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 218 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 106
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 107 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 161 THEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLA---------KLCTT 292
I + IA+ +E+LH S ++H D+KP NI D K+ DFGL + T
Sbjct: 123 IFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ G GT Y++ E N SHK D++S G+++ EL+
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGN--SYSHKVDIFSLGLILFELL 224
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 107
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 108 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 161
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 162 THEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 190 HVNVVTLLGFCLEGNNRA--LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
H ++V G C + ++ L+ E++P GSL ++ P + ++ I
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-------PRHCVGLAQLLLFAQQIC 121
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
+G+ YLH + +H + N+LLD D KI DFGLAK +
Sbjct: 122 EGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 178
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG-CKNN 344
+ A E + + SDV+SFG+ + EL+ C +N
Sbjct: 179 FWYAPECLKEC--KFYYASDVWSFGVTLYELLTYCDSN 214
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
L + H NVV L+ C I + +++ + P L E + +
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 124
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLL 301
++ +GL++LH C I+H D+KP NIL+ K++DFGLA++ + + + ++
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV 181
Query: 302 GARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
T+ Y A EV ++ + D++S G + E+
Sbjct: 182 ----TLWYRAPEVLLQS--TYATPVDMWSVGCIFAEM 212
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 190 HVNVVTLLGFCLEGNNRA--LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
H ++V G C + ++ L+ E++P GSL ++ P + ++ I
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-------PRHCVGLAQLLLFAQQIC 122
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
+G+ YLH + +H + N+LLD D KI DFGLAK +
Sbjct: 123 EGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 179
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG-CKNN 344
+ A E + + SDV+SFG+ + EL+ C +N
Sbjct: 180 FWYAPECLKEC--KFYYASDVWSFGVTLYELLTYCDSN 215
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 106
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 107 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 160
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 161 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E++ +L V+ P ++ E++ + L + H+ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTP------KRAIEVIADACQALNFSHQNG---IIHRDVK 143
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
P NIL+ K+ DFG+A+ V GT Y++ E + V +SD
Sbjct: 144 PANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 328 VYSFGMMIMELV 339
VYS G ++ E++
Sbjct: 202 VYSLGCVLYEVL 213
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 108
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 109 SYLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP---VRTY 162
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 163 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSL--------EKFVYNG---------DTSKPC 231
SH N+V LLG C LI+E+ G L EKF + + +
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 232 QYLRWEKMYEIVIGIAKGLEYLH-RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC 290
L +E + +AKG+E+L + C +H D+ N+L+ KI DFGLA+
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 291 TTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVD 350
+ V AR + ++A E G + KSDV+S+G+++ E+ N G+
Sbjct: 223 MSDSNYVVR-GNARLPVKWMAPESLFE--GIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279
Query: 351 NSSEVY 356
+ Y
Sbjct: 280 VDANFY 285
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
L + H NVV L+ C I + +++ + P L E + +
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLL 301
++ +GL++LH C I+H D+KP NIL+ K++DFGLA++ + + + ++
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV 173
Query: 302 GARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
T+ Y A EV ++ + D++S G + E+
Sbjct: 174 ----TLWYRAPEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 113
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S +++H DIKP N+LL KI+DFG + + +
Sbjct: 114 ----ITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL 166
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 167 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQDT----- 214
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 215 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E++ +L V+ P ++ E++ + L + H+ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTP------KRAIEVIADACQALNFSHQNG---IIHRDVK 143
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
P NI++ K+ DFG+A+ V+ GT Y++ E + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 328 VYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQD 368
VYS G ++ E++ + +S Y+HV +D
Sbjct: 202 VYSLGCVLYEVLTGEPPFTGDSPDS-------VAYQHVRED 235
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I GLE LHR RI++ D+KP NILLD +ISD GLA +G ++ G G
Sbjct: 295 ICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEG--QTIKGRVG 347
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
T+GY+A EV + D ++ G ++ E++
Sbjct: 348 TVGYMAPEVVKNE--RYTFSPDWWALGCLLYEMIA 380
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGS-LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H N++TL +G + L+ E M G L+K + ++ + ++ I K
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ-------KFFSEREASFVLHTIGK 132
Query: 249 GLEYLHRGCSTRILHFDIKPHNIL-LDQD---FCPKISDFGLAKLCTTKKGIVSSLLGAR 304
+EYLH S ++H D+KP NIL +D+ C +I DFG AK + G+ L+
Sbjct: 133 TVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL---LMTPC 186
Query: 305 GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
T ++A EV R D++S G+++ ++ +G ++ E
Sbjct: 187 YTANFVAPEVLKRQ--GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE 234
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E++ +L V+ P ++ E++ + L + H+ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTP------KRAIEVIADACQALNFSHQNG---IIHRDVK 143
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
P NI++ K+ DFG+A+ V+ GT Y++ E + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 328 VYSFGMMIMELV 339
VYS G ++ E++
Sbjct: 202 VYSLGCVLYEVL 213
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PC 231
L + H NV+ LL F P SLE+F VY D + C
Sbjct: 72 LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q L + + ++ I +GL+Y+H S I+H D+KP N+ +++D KI D+GLA+
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTD 176
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ G T Y A E+ N+ + D++S G ++ EL+
Sbjct: 177 ------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK----- 107
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 108 SYLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP---VRTY 161
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 162 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E++ +L V+ P ++ E++ + L + H+ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTP------KRAIEVIADACQALNFSHQNG---IIHRDVK 143
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
P NI++ K+ DFG+A+ V+ GT Y++ E + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 328 VYSFGMMIMELV 339
VYS G ++ E++
Sbjct: 202 VYSLGCVLYEVL 213
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E++ +L V+ P ++ E++ + L + H+ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTP------KRAIEVIADACQALNFSHQNG---IIHRDVK 143
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
P NI++ K+ DFG+A+ V+ GT Y++ E + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 328 VYSFGMMIMELV 339
VYS G ++ E++
Sbjct: 202 VYSLGCVLYEVL 213
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 116
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI++FG + + +
Sbjct: 117 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL 169
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 170 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 217
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 218 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I GLE LHR RI++ D+KP NILLD +ISD GLA +G ++ G G
Sbjct: 295 ICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEG--QTIKGRVG 347
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
T+GY+A EV + D ++ G ++ E++
Sbjct: 348 TVGYMAPEVVKNE--RYTFSPDWWALGCLLYEMIA 380
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 184
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N + D++S G ++ EL+
Sbjct: 185 TRWYRAPEIM-LNAMHYNQTVDIWSVGCIMAELL 217
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
++ E++ +L V+ P ++ E++ + L + H+ I+H D+K
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTP------KRAIEVIADACQALNFSHQNG---IIHRDVK 160
Query: 268 PHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSD 327
P NI++ K+ DFG+A+ V+ GT Y++ E + V +SD
Sbjct: 161 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 218
Query: 328 VYSFGMMIMELV 339
VYS G ++ E++
Sbjct: 219 VYSLGCVLYEVL 230
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIK----- 109
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 110 SYLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP---VRTY 163
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 164 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
L + H NVV L+ C I + +++ + P L E + +
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLL 301
++ +GL++LH C I+H D+KP NIL+ K++DFGLA++ + + + ++
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV 173
Query: 302 GARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
T+ Y A EV ++ + D++S G + E+
Sbjct: 174 ----TLWYRAPEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 100/232 (43%), Gaps = 31/232 (13%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV--YNGDTSKPCQYLRWEKM 239
+A ++ H N+V E + ++ ++ G L K + G + Q L W
Sbjct: 74 VAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW--- 130
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
+ I L+++H +ILH DIK NI L +D ++ DFG+A++ + + +
Sbjct: 131 ---FVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA 184
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPH 359
+ GT Y++ E+ ++KSD+++ G ++ EL K+ ++G + +
Sbjct: 185 CI---GTPYYLSPEICENK--PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS 239
Query: 360 WIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
+ V + L +V++ + P DRP +N ++E
Sbjct: 240 GSFPPVSLHYSYDLRSLVSQ---------------LFKRNPRDRPSVNSILE 276
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 115
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI++FG + + +
Sbjct: 116 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL 168
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 169 C-----GTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 216
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 217 ---YKRISRV-EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 258
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 69/155 (44%), Gaps = 20/155 (12%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L + L+ EF G L + + N C I+ I G
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD------AANIMKQILSG 158
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQD---FCPKISDFGLAKLCTTKKGIVSSLLGARGT 306
+ YLH+ I+H DIKP NILL+ KI DFGL+ + + L GT
Sbjct: 159 ICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL----GT 211
Query: 307 IGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGC 341
YIA EV + + E K DV+S G +IM ++ C
Sbjct: 212 AYYIAPEVLKKKYNE---KCDVWSCG-VIMYILLC 242
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+KF+ + T P ++
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIK----- 107
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 108 SYLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP---VRTY 161
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 162 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
++ + H N+V+L+ L++EFM L+K + T ++ +Y+
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKI-YLYQ 127
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI-VSSL 300
++ G+A ++ RILH D+KP N+L++ D K++DFGLA+ GI V S
Sbjct: 128 LLRGVAHCHQH-------RILHRDLKPQNLLINSDGALKLADFGLARAF----GIPVRSY 176
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
T+ Y A +V + + S D++S G + E++ K
Sbjct: 177 THEVVTLWYRAPDVLMGS-KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 17/156 (10%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG 245
S H N++ L G+ + LI E+ P G++ + + + ++ +
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL------QKLSRFDEQRTATYITE 120
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
+A L Y H S R++H DIKP N+LL + KI+DFG + + + G
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC-----G 172
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIME-LVG 340
T+ Y+ E+ + K D++S G++ E LVG
Sbjct: 173 TLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVG 206
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
++ + H N+V+L+ L++EFM L+K + T ++ +Y+
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKI-YLYQ 127
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI-VSSL 300
++ G+A ++ RILH D+KP N+L++ D K++DFGLA+ GI V S
Sbjct: 128 LLRGVAHCHQH-------RILHRDLKPQNLLINSDGALKLADFGLARAF----GIPVRSY 176
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
T+ Y A +V + + S D++S G + E++ K
Sbjct: 177 THEVVTLWYRAPDVLMGS-KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEK 238
S H N++ L G+ + LI E+ P G+ L KF D + Y
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY----- 139
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
+ +A L Y H S R++H DIKP N+LL KI+DFG + + S
Sbjct: 140 ----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----S 187
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFP 358
GT+ Y+ E+ + K D++S G++ E + K ++ +
Sbjct: 188 RRDDLCGTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET----- 240
Query: 359 HWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVIE 411
Y+ + + EF VT+ ++ ++ ++ P RP + EV+E
Sbjct: 241 ---YKRISR-VEFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 282
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 21/160 (13%)
Query: 180 DGLASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEK 238
D +A + + H N++ L F + N L+ E G L ++ + S+ +
Sbjct: 70 DEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---- 125
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLD---QDFCPKISDFGLAKLCTTKKG 295
I+ + G YLH+ I+H D+KP N+LL+ +D KI DFGL+
Sbjct: 126 ---IMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK 179
Query: 296 IVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMI 335
+ L GT YIA EV + + E K DV+S G+++
Sbjct: 180 MKERL----GTAYYIAPEVLRKKYDE---KCDVWSCGVIL 212
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 22/180 (12%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H N+V LLG C G +I E+ G L F+ + + L + + I A
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-----RRKSRVLETDPAFAIANSTAS 162
Query: 249 GLEYLHRG----------CSTRILHFDIKPHNILLDQDFCPKISDFGLAK-LCTTKKGIV 297
+ LH S +H D+ N+LL KI DFGLA+ + IV
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 298 SSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
AR + ++A E +F + + +SDV+S+G+++ E+ N G+ +S+ Y
Sbjct: 223 KG--NARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 277
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
L + H NVV L+ C I + +++ + P L E + +
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLL 301
++ +GL++LH C I+H D+KP NIL+ K++DFGLA++ + + + ++
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV 173
Query: 302 GARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
T+ Y A EV ++ + D++S G + E+
Sbjct: 174 ----TLWYRAPEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 206 RALIYEFMPNGSLEKFVYNGDTSK--PCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILH 263
RA E M + L + D K Q+L + + + I +GL+Y+H S +LH
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 167
Query: 264 FDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVS 323
D+KP N+LL+ KI DFGLA++ L T Y A E+ + G +
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YT 226
Query: 324 HKSDVYSFGMMIMELVGCK 342
D++S G ++ E++ +
Sbjct: 227 KSIDIWSVGCILAEMLSNR 245
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 21/160 (13%)
Query: 180 DGLASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEK 238
D +A + + H N++ L F + N L+ E G L ++ + S+ +
Sbjct: 53 DEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---- 108
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLD---QDFCPKISDFGLAKLCTTKKG 295
I+ + G YLH+ I+H D+KP N+LL+ +D KI DFGL+
Sbjct: 109 ---IMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK 162
Query: 296 IVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMI 335
+ L GT YIA EV + + E K DV+S G+++
Sbjct: 163 MKERL----GTAYYIAPEVLRKKYDE---KCDVWSCGVIL 195
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGD---TSKPC-----QYLRWEKMY 240
H N+V LLG C G +I E+ G L F+ + P L +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK-LCTTKKGIVSS 299
+A+G+ +L S +H D+ N+LL KI DFGLA+ + IV
Sbjct: 168 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 300 LLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
AR + ++A E +F + + +SDV+S+G+++ E+ N G+ +S+ Y
Sbjct: 225 --NARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 277
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 231 CQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC 290
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 118 TQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVA 174
Query: 291 TTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 175 DPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 27/187 (14%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQY--------- 233
H N+V LLG C G +I E+ G L F+ G + P Q
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 234 --LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK-LC 290
L + +A+G+ +L S +H D+ N+LL KI DFGLA+ +
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 291 TTKKGIVSSLLGARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGV 349
IV AR + ++A E +F + + +SDV+S+G+++ E+ N G+
Sbjct: 210 NDSNYIVKG--NARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIFSLGLNPYPGI 264
Query: 350 DNSSEVY 356
+S+ Y
Sbjct: 265 LVNSKFY 271
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLE--KFVYNGDTSKPCQYLRWEKMYEI 242
+ + H N+V LL C + L++EF+ + L+ + NG L ++ + +
Sbjct: 78 LKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG--------LDYQVVQKY 129
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
+ I G+ + H S I+H DIKP NIL+ Q K+ DFG A+ + +
Sbjct: 130 LFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA 186
Query: 303 ARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMEL 338
R Y A E+ G+V + DV++ G ++ E+
Sbjct: 187 TR---WYRAPELL---VGDVKYGKAVDVWAIGCLVTEM 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H NV+TL + LI E + G L F+ ++ L E+ + I G
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES------LSEEEATSFIKQILDG 127
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSLLGARG 305
+ YLH + +I HFD+KP NI+L P K+ DFGLA + G+ G
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGV--EFKNIFG 180
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
T ++A E+ N+ + ++D++S G++
Sbjct: 181 TPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + C L + + ++
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQ 129
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 180
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 181 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 213
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H NV+TL + LI E + G L F+ ++ L E+ + I G
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES------LSEEEATSFIKQILDG 127
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSLLGARG 305
+ YLH + +I HFD+KP NI+L P K+ DFGLA + G+ G
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGV--EFKNIFG 180
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
T ++A E+ N+ + ++D++S G++
Sbjct: 181 TPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H NV+TL + LI E + G L F+ ++ L E+ + I G
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES------LSEEEATSFIKQILDG 127
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSLLGARG 305
+ YLH + +I HFD+KP NI+L P K+ DFGLA + G+ G
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGV--EFKNIFG 180
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
T ++A E+ N+ + ++D++S G++
Sbjct: 181 TPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H NV+TL + LI E + G L F+ ++ L E+ + I G
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES------LSEEEATSFIKQILDG 127
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSLLGARG 305
+ YLH + +I HFD+KP NI+L P K+ DFGLA + G+ G
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGV--EFKNIFG 180
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
T ++A E+ N+ + ++D++S G++
Sbjct: 181 TPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 25/152 (16%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDT---SKPCQYLRWEKMYEIVIGI 246
H N++TL + LI E + G L F+ ++ + Q+L+ I
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ---------I 124
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSLLG 302
G+ YLH S RI HFD+KP NI+L P K+ DFG+A +
Sbjct: 125 LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-- 179
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 180 --GTPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H NV+TL + LI E + G L F+ ++ L E+ + I G
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES------LSEEEATSFIKQILDG 127
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSLLGARG 305
+ YLH + +I HFD+KP NI+L P K+ DFGLA + G+ G
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGV--EFKNIFG 180
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
T ++A E+ N+ + ++D++S G++
Sbjct: 181 TPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 231 CQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC 290
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 118 TQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVA 174
Query: 291 TTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 175 DPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 231 CQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC 290
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 122 TQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVA 178
Query: 291 TTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 25/152 (16%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDT---SKPCQYLRWEKMYEIVIGI 246
H N++TL + LI E + G L F+ ++ + Q+L+ I
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ---------I 117
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSLLG 302
G+ YLH S RI HFD+KP NI+L P K+ DFG+A +
Sbjct: 118 LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-- 172
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 173 --GTPEFVAPEIV--NYEPLGLEADMWSIGVI 200
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 237 EKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI 296
E + +++ + +GL++LH S R++H D+KP NIL+ K++DFGLA++ + + +
Sbjct: 120 ETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL 176
Query: 297 VSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
S ++ T+ Y A EV ++ + D++S G + E+
Sbjct: 177 TSVVV----TLWYRAPEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 231 CQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC 290
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 118 TQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVA 174
Query: 291 TTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 175 DPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 194 VTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIV 243
+ LL N L+ F P S+E F VY D + Q L E + +V
Sbjct: 78 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLV 137
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
+ +GL+Y+H S I+H D+KP N+ +++D +I DFGLA+ + + G
Sbjct: 138 YQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE------MTGY 188
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
T Y A E+ N+ + D++S G ++ EL+ K
Sbjct: 189 VATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 231 CQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC 290
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 122 TQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVA 178
Query: 291 TTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++TL + LI E + G L F+ ++ L E+ + I G
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES------LSEEEATSFIKQILDG 127
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSLLGARG 305
+ YLH + +I HFD+KP NI+L P K+ DFGLA + G+ G
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGV--EFKNIFG 180
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
T ++A E+ N+ + ++D++S G++
Sbjct: 181 TPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 237 EKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI 296
E + +++ + +GL++LH S R++H D+KP NIL+ K++DFGLA++ + + +
Sbjct: 120 ETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL 176
Query: 297 VSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
S ++ T+ Y A EV ++ + D++S G + E+
Sbjct: 177 TSVVV----TLWYRAPEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 17/156 (10%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG 245
S H N++ L G+ + LI E+ P G++ + + + ++ +
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL------QKLSRFDEQRTATYITE 120
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
+A L Y H S R++H DIKP N+LL + KI+DFG + + + G
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC-----G 172
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIME-LVG 340
T+ Y+ E+ + K D++S G++ E LVG
Sbjct: 173 TLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVG 206
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 123 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 180 PDHDHTGFLXEXVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 124 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 180
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 181 PDHDHTGFLXEXVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 230
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 17/155 (10%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H +++TL+ + L+++ M G L ++ T K L ++ I+ + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVA--LSEKETRSIMRSLLEA 212
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
+ +LH + I+H D+KP NILLD + ++SDFG + C + G L GT GY
Sbjct: 213 VSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFS--CHLEPG--EKLRELCGTPGY 265
Query: 310 IALEVFSRNFGEV----SHKSDVYSFGMMIMELVG 340
+A E+ + E + D+++ G+++ L+
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA 300
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 237 EKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI 296
E + +++ + +GL++LH S R++H D+KP NIL+ K++DFGLA++ + + +
Sbjct: 120 ETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL 176
Query: 297 VSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
S ++ T+ Y A EV ++ + D++S G + E+
Sbjct: 177 TSVVV----TLWYRAPEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 25/152 (16%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDT---SKPCQYLRWEKMYEIVIGI 246
H N++TL + LI E + G L F+ ++ + Q+L+ I
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ---------I 138
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIVSSLLG 302
G+ YLH S RI HFD+KP NI+L P K+ DFG+A +
Sbjct: 139 LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-- 193
Query: 303 ARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT ++A E+ N+ + ++D++S G++
Sbjct: 194 --GTPEFVAPEIV--NYEPLGLEADMWSIGVI 221
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++EF+ + L+ F+ + T P ++
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIK----- 109
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 110 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 163
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 164 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
VT G + + E M + SL+KF Y K Q + + + +I + I K LE+
Sbjct: 112 TVTFYGALFREGDVWICMELM-DTSLDKF-YKQVIDK-GQTIPEDILGKIAVSIVKALEH 168
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
LH S ++H D+KP N+L++ K+ DFG++ V+ + A G Y+A
Sbjct: 169 LHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDS---VAKTIDA-GCKPYMAP 222
Query: 313 EVFSRNFGE--VSHKSDVYSFGMMIMELVGCKNNLDS 347
E + + S KSD++S G+ ++EL + DS
Sbjct: 223 ERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 259
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + Q L + + ++
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQ 133
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTD------DEMTGYVA 184
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
T Y A E+ N+ + D++S G ++ EL+ +
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 231 CQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC 290
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 120 TQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVA 176
Query: 291 TTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 177 DPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 227
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI FGLA+ + G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTD------DEMTGYVA 184
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 121 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 177
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 178 PDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 227
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI D GLA+ + G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTD------DEMTGYVA 184
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 121 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 177
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 178 PDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 119 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 175
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 14/177 (7%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
++ + +H N+V LL N L++EF+ + + T P ++
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIK-----S 107
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLL 301
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP---VRTYX 161
Query: 302 GARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 162 HEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+ G L+ +I E++ GS + G L + I+ I KGL+Y
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP-------LEETYIATILREILKGLDY 131
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
LH S R +H DIK N+LL + K++DFG+A T + + + GT ++A
Sbjct: 132 LH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV---GTPFWMAP 185
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIMELV 339
EV ++ K+D++S G+ +EL
Sbjct: 186 EVIKQS--AYDFKADIWSLGITAIELA 210
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 123 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PC 231
L + H NV+ LL F P SLE+F VY D + C
Sbjct: 72 LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q L + + ++ I +GL+Y+H S I+H D+KP N+ +++D KI D GLA+
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTD 176
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ G T Y A E+ N+ + D++S G ++ EL+
Sbjct: 177 ------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 117 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 173
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 174 PDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 223
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + CQ L + + ++
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DF LA+ + G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTD------DEMTGYVA 184
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y A E+ N+ + D++S G ++ EL+
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 124 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 180
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 181 PDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 117 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 173
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 174 PDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 223
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 125 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 181
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 182 PDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 116 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 172
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 173 PDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 123 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 14/177 (7%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
++ + +H N+V LL N L++EF+ + + T P ++
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK-----S 110
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLL 301
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 111 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYX 164
Query: 302 GARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 165 HEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 127 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 183
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 184 PDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 119 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 175
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 17/159 (10%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ + H N + G L + L+ E+ + + + KP Q + ++ +
Sbjct: 108 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH---KKPLQEV---EIAAVTH 161
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
G +GL YLH S ++H D+K NILL + K+ DFG A + V
Sbjct: 162 GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------- 211
Query: 305 GTIGYIALEV-FSRNFGEVSHKSDVYSFGMMIMELVGCK 342
GT ++A EV + + G+ K DV+S G+ +EL K
Sbjct: 212 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 250
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLL 301
+V + KGL Y+H + I+H D+KP N+ +++D KI DFGLA+ S +
Sbjct: 133 LVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD------SEMX 183
Query: 302 GARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
G T Y A EV N+ + D++S G ++ E++ K
Sbjct: 184 GXVVTRWYRAPEVIL-NWMRYTQTVDIWSVGCIMAEMITGKT 224
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S +LH D+KP N+L++ KI DFGLA++ + L
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
T Y A E+ + G + D++S G ++ E++ +
Sbjct: 210 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 245
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 139 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 195
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
L T Y A E+ + G + D++S G ++ E++ +
Sbjct: 196 PDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 245
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 14/177 (7%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
++ + +H N+V LL N L++EF+ + + T P ++
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK-----S 109
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLL 301
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 110 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYX 163
Query: 302 GARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 164 HEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++TL +G ++ E G L + ++ + ++ I K
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ------KFFSEREASAVLFTITKT 128
Query: 250 LEYLHRGCSTRILHFDIKPHNIL-LDQDFCP---KISDFGLAKLCTTKKGIVSSLLGARG 305
+EYLH + ++H D+KP NIL +D+ P +I DFG AK + G++ +
Sbjct: 129 VEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC---Y 182
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
T ++A EV R + + D++S G+++ + +G D++ E
Sbjct: 183 TANFVAPEVLERQGYDAA--CDIWSLGVLLYTXLTGYTPFANGPDDTPE 229
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 17/159 (10%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
+ + H N + G L + L+ E+ + + + KP Q + ++ +
Sbjct: 69 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH---KKPLQEV---EIAAVTH 122
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
G +GL YLH S ++H D+K NILL + K+ DFG A + V
Sbjct: 123 GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------- 172
Query: 305 GTIGYIALEV-FSRNFGEVSHKSDVYSFGMMIMELVGCK 342
GT ++A EV + + G+ K DV+S G+ +EL K
Sbjct: 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 211
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 22/184 (11%)
Query: 184 SISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIV 243
++ + H ++V L+G E N +I E G L F+ S L +
Sbjct: 64 TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS-----LDLASLILYA 117
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
++ L YL S R +H DI N+L+ + C K+ DFGL++ +S
Sbjct: 118 YQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKAS--KG 172
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNNLDSG-VDNSSE 354
+ I ++A E S NF + SDV+ FG+ + E++ G KNN G ++N
Sbjct: 173 KLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 230
Query: 355 VYFP 358
+ P
Sbjct: 231 LPMP 234
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PC 231
L + H NV+ LL F P SLE+F VY D + C
Sbjct: 72 LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 232 QYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
Q L + + ++ I +GL+Y+H S I+H D+KP N+ +++D KI D GLA+
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTD 176
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ G T Y A E+ N+ + D++S G ++ EL+
Sbjct: 177 ------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 188 TSHVNVVTLLGFCLEGNNRA------LIYEFMPNGSLEKFVYN--GDTSKPCQYLRWEKM 239
+ H N+ T G ++ N L+ EF GS+ + N G+T L+ E +
Sbjct: 78 SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT------LKEEWI 131
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
I I +GL +LH+ +++H DIK N+LL ++ K+ DFG++ G ++
Sbjct: 132 AYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT 188
Query: 300 LLGARGTIGYIALEVFSRNF---GEVSHKSDVYSFGMMIMELV 339
+ GT ++A EV + + KSD++S G+ +E+
Sbjct: 189 FI---GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNG--DTSKPCQYLRWEKMYEIVIGIAKGL 250
V G L+ +I E++ GS + G D ++ LR I KGL
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---------EILKGL 117
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
+YLH S + +H DIK N+LL + K++DFG+A T + ++ + GT ++
Sbjct: 118 DYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV---GTPFWM 171
Query: 311 ALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
A EV ++ K+D++S G+ +EL
Sbjct: 172 APEVIKQS--AYDSKADIWSLGITAIELA 198
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 17/151 (11%)
Query: 189 SHVNVVTLLGFCLEGNNR-ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
H NV+ FC E + + I + +L+++V D + +L E + ++
Sbjct: 76 EHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFA----HLGLEPI-TLLQQTT 128
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQ-----DFCPKISDFGLAKLCTTKKGIVSSLLG 302
GL +LH S I+H D+KPHNIL+ ISDFGL K + S G
Sbjct: 129 SGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSG 185
Query: 303 ARGTIGYIALEVFSRNFGE-VSHKSDVYSFG 332
GT G+IA E+ S + E ++ D++S G
Sbjct: 186 VPGTEGWIAPEMLSEDCKENPTYTVDIFSAG 216
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 23/164 (14%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEF---MP--NGSLEKFVYNGDTSKPCQYLRWEKM 239
+ H NV+ LL ++ Y+F MP L+K + + + QYL
Sbjct: 95 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYL----- 149
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
V + KGL+Y+H S ++H D+KP N+ +++D KI DFGLA+ +
Sbjct: 150 ---VYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD------AE 197
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
+ G T Y A EV ++ + D++S G ++ E++ K
Sbjct: 198 MTGYVVTRWYRAPEVI-LSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + Q L + + ++
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQ 133
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGLA+ + G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMTGYVA 184
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
T Y A E+ N+ + D++S G ++ EL+ +
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
GLE++H + +++ D+KP NILLD+ +ISD GLA + KK S GT G
Sbjct: 304 GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----GTHG 355
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
Y+A EV + S +D +S G M+ +L+
Sbjct: 356 YMAPEVLQKGVAYDS-SADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
GLE++H + +++ D+KP NILLD+ +ISD GLA + KK S GT G
Sbjct: 304 GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----GTHG 355
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
Y+A EV + S +D +S G M+ +L+
Sbjct: 356 YMAPEVLQKGVAYDS-SADWFSLGCMLFKLL 385
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 207 ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDI 266
++ E M GSL++ + K + + E + ++ I + +GL YL +I+H D+
Sbjct: 90 SICMEHMDGGSLDQVL------KEAKRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDV 141
Query: 267 KPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS 326
KP NIL++ K+ DFG++ + +S +G R Y+A E V +S
Sbjct: 142 KPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTR---SYMAPERLQGTHYSV--QS 194
Query: 327 DVYSFGMMIMELV 339
D++S G+ ++EL
Sbjct: 195 DIWSMGLSLVELA 207
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
GLE++H + +++ D+KP NILLD+ +ISD GLA + KK S GT G
Sbjct: 303 GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----GTHG 354
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
Y+A EV + S +D +S G M+ +L+
Sbjct: 355 YMAPEVLQKGVAYDS-SADWFSLGCMLFKLL 384
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
GLE++H + +++ D+KP NILLD+ +ISD GLA + KK S GT G
Sbjct: 304 GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----GTHG 355
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
Y+A EV + S +D +S G M+ +L+
Sbjct: 356 YMAPEVLQKGVAYDS-SADWFSLGCMLFKLL 385
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMY 240
+A + + H N+V L N+ L+ + + G L ++ V G + +
Sbjct: 71 IAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKG-------FYTEKDAS 123
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAKLCTTKKGIV 297
++ + + YLHR I+H D+KP N+L D++ ISDFGL+K+ KG V
Sbjct: 124 TLIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDV 178
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
S A GT GY+A EV ++ S D +S G++
Sbjct: 179 MST--ACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 211
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 31/164 (18%)
Query: 180 DGLASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-----EKFVYNGDTSKPCQYL 234
+ +A + + H N+VTL + L+ + + G L E+ VY
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYT---------- 104
Query: 235 RWEKMYEIVIG-IAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAKLC 290
EK +VI + ++YLH I+H D+KP N+L +++ I+DFGL+K+
Sbjct: 105 --EKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM- 158
Query: 291 TTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
+ GI+S+ A GT GY+A EV ++ S D +S G++
Sbjct: 159 -EQNGIMST---ACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 196
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 231 CQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK-L 289
Q L E + + + +GL+Y+H S +++H D+KP N+L++++ KI DFG+A+ L
Sbjct: 153 SQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 209
Query: 290 CTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
CT+ + T Y A E+ + E + D++S G + E++ +
Sbjct: 210 CTSPAEHQYFMTEYVATRWYRAPELML-SLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 184 SISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----YNGDTSKPCQYLRWEKM 239
++ + H ++V L+G E N +I E G L F+ Y+ D + Y
Sbjct: 64 TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY------ 116
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ L YL S R +H DI N+L+ + C K+ DFGL++ +S
Sbjct: 117 ---AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 170
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNNLDSG-VD 350
+ I ++A E S NF + SDV+ FG+ + E++ G KNN G ++
Sbjct: 171 --KGKLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
Query: 351 NSSEVYFP 358
N + P
Sbjct: 227 NGERLPMP 234
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 184 SISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----YNGDTSKPCQYLRWEKM 239
++ + H ++V L+G E N +I E G L F+ Y+ D + Y
Sbjct: 61 TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY------ 113
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ L YL S R +H DI N+L+ + C K+ DFGL++ +S
Sbjct: 114 ---AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 167
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNNLDSG-VD 350
+ I ++A E S NF + SDV+ FG+ + E++ G KNN G ++
Sbjct: 168 --KGKLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 223
Query: 351 NSSEVYFP 358
N + P
Sbjct: 224 NGERLPMP 231
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
V G L+ +I E++ GS + G L ++ I+ I KGL+Y
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-------LDETQIATILREILKGLDY 134
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
LH S + +H DIK N+LL + K++DFG+A T + + + GT ++A
Sbjct: 135 LH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV---GTPFWMAP 188
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIMELV 339
EV ++ K+D++S G+ +EL
Sbjct: 189 EVIKQS--AYDSKADIWSLGITAIELA 213
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++E + + L+KF+ + T P ++
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIK----- 109
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 110 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 163
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 164 XHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 233 YLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
+ + E + + + L+YL + RI+H D+KP NILLD+ I+DF +A +
Sbjct: 111 HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGE-VSHKSDVYSFGMMIMELV 339
+ I + GT Y+A E+FS G S D +S G+ EL+
Sbjct: 168 ETQITT----MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELL 211
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 184 SISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----YNGDTSKPCQYLRWEKM 239
++ + H ++V L+G E N +I E G L F+ Y+ D + Y
Sbjct: 64 TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY------ 116
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ L YL S R +H DI N+L+ + C K+ DFGL++ +S
Sbjct: 117 ---AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 170
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNNLDSG-VD 350
+ I ++A E S NF + SDV+ FG+ + E++ G KNN G ++
Sbjct: 171 --KGKLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
Query: 351 NSSEVYFP 358
N + P
Sbjct: 227 NGERLPMP 234
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 23/164 (14%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEF---MP--NGSLEKFVYNGDTSKPCQYLRWEKM 239
+ H NV+ LL ++ Y+F MP L+K + + + QYL
Sbjct: 77 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYL----- 131
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
V + KGL+Y+H S ++H D+KP N+ +++D KI DFGLA+ +
Sbjct: 132 ---VYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD------AE 179
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
+ G T Y A EV ++ + D++S G ++ E++ K
Sbjct: 180 MTGYVVTRWYRAPEVI-LSWMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
V G L+ +I E++ GS + G L ++ I+ I KGL+Y
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-------LDETQIATILREILKGLDY 139
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
LH S + +H DIK N+LL + K++DFG+A T + ++ + GT ++A
Sbjct: 140 LH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV---GTPFWMAP 193
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIMELV 339
EV ++ K+D++S G+ +EL
Sbjct: 194 EVIKQS--AYDSKADIWSLGITAIELA 218
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 194 VTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 253
VT G + + E M + SL+KF Y K Q + + + +I + I K LE+L
Sbjct: 69 VTFYGALFREGDVWICMELM-DTSLDKF-YKQVIDK-GQTIPEDILGKIAVSIVKALEHL 125
Query: 254 HRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE 313
H S ++H D+KP N+L++ K+ DFG++ V+ + A G Y+A E
Sbjct: 126 HSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDIDA-GCKPYMAPE 179
Query: 314 VFSRNFGE--VSHKSDVYSFGMMIMELVGCKNNLDS 347
+ + S KSD++S G+ ++EL + DS
Sbjct: 180 RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 184 SISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----YNGDTSKPCQYLRWEKM 239
++ + H ++V L+G E N +I E G L F+ Y+ D + Y
Sbjct: 66 TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY------ 118
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ L YL S R +H DI N+L+ + C K+ DFGL++ +S
Sbjct: 119 ---AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 172
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNNLDSG-VD 350
+ I ++A E S NF + SDV+ FG+ + E++ G KNN G ++
Sbjct: 173 --KGKLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 228
Query: 351 NSSEVYFP 358
N + P
Sbjct: 229 NGERLPMP 236
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 71/157 (45%), Gaps = 21/157 (13%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA-KGL 250
+V L G EG + E + GSL + V Q E +G A +GL
Sbjct: 146 RIVPLYGAVREGPWVNIFMELLEGGSLGQLVKE-------QGCLPEDRALYYLGQALEGL 198
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFC-PKISDFGLAKLCTTKKGIVSSLLGAR---GT 306
EYLH S RILH D+K N+LL D + DFG A +C G+ SLL GT
Sbjct: 199 EYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGKSLLTGDYIPGT 254
Query: 307 IGYIALE-VFSRNFGEVSHKSDVYSF-GMMIMELVGC 341
++A E V R+ K DV+S MM+ L GC
Sbjct: 255 ETHMAPEVVLGRS---CDAKVDVWSSCCMMLHMLNGC 288
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 184 SISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----YNGDTSKPCQYLRWEKM 239
++ + H ++V L+G E N +I E G L F+ Y+ D + Y
Sbjct: 69 TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY------ 121
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ L YL S R +H DI N+L+ + C K+ DFGL++ +S
Sbjct: 122 ---AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 175
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNNLDSG-VD 350
+ I ++A E S NF + SDV+ FG+ + E++ G KNN G ++
Sbjct: 176 --KGKLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 231
Query: 351 NSSEVYFP 358
N + P
Sbjct: 232 NGERLPMP 239
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 14/104 (13%)
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLD---QDFCPKISDFGLAKLCTTKKGIVS 298
I+ + G+ Y+H+ +I+H D+KP N+LL+ +D +I DFGL+ K +
Sbjct: 131 IIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 187
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMI-MELVGC 341
+ GT YIA EV + E K DV+S G+++ + L GC
Sbjct: 188 KI----GTAYYIAPEVLHGTYDE---KCDVWSTGVILYILLSGC 224
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP-CQYLRWEKMYEIVIGIAK 248
H +++ L + + N L+ E NG + +++ N KP + M++I+ G+
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN--RVKPFSENEARHFMHQIITGML- 126
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
YLH S ILH D+ N+LL ++ KI+DFGLA +L GT
Sbjct: 127 ---YLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC---GTPN 177
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
YI+ E+ +R+ + +SDV+S G M L+
Sbjct: 178 YISPEIATRSAHGL--ESDVWSLGCMFYTLL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 184 SISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----YNGDTSKPCQYLRWEKM 239
++ + H ++V L+G E N +I E G L F+ Y+ D + Y
Sbjct: 92 TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY------ 144
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ L YL S R +H DI N+L+ + C K+ DFGL++ +S
Sbjct: 145 ---AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 198
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNNLDSG-VD 350
+ I ++A E S NF + SDV+ FG+ + E++ G KNN G ++
Sbjct: 199 --KGKLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 254
Query: 351 NSSEVYFP 358
N + P
Sbjct: 255 NGERLPMP 262
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 14/104 (13%)
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLD---QDFCPKISDFGLAKLCTTKKGIVS 298
I+ + G+ Y+H+ +I+H D+KP N+LL+ +D +I DFGL+ K +
Sbjct: 154 IIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 210
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMI-MELVGC 341
+ GT YIA EV + E K DV+S G+++ + L GC
Sbjct: 211 KI----GTAYYIAPEVLHGTYDE---KCDVWSTGVILYILLSGC 247
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 231 CQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK-L 289
Q L E + + + +GL+Y+H S +++H D+KP N+L++++ KI DFG+A+ L
Sbjct: 152 SQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208
Query: 290 CTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
CT+ + T Y A E+ + E + D++S G + E++ +
Sbjct: 209 CTSPAEHQYFMTEYVATRWYRAPELML-SLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 194 VTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEKMYEIVI 244
+ L+ N L+ F P SLE+F VY + + S+ Q L E+M ++
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
+ G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 134 QMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT 178
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +EY HR +I+H D+KP N+LLD+ KI+DFGL+ + T + +S G
Sbjct: 116 IISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----G 168
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMI 335
+ Y A EV S + DV+S G+++
Sbjct: 169 SPNYAAPEVISGKL-YAGPEVDVWSCGVIL 197
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +EY HR +I+H D+KP N+LLD+ KI+DFGL+ + T + +S G
Sbjct: 122 IISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----G 174
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMI 335
+ Y A EV S + DV+S G+++
Sbjct: 175 SPNYAAPEVISGKL-YAGPEVDVWSCGVIL 203
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
Query: 236 WEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFG-LAKLCTTKK 294
W + + ++ +A +LH S ++H D+KP NI L K+ DFG L +L T
Sbjct: 160 WGYLRDTLLALA----HLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA 212
Query: 295 GIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSE 354
G V G Y+A E+ ++G +DV+S G+ I+E V C L G + +
Sbjct: 213 GEVQE-----GDPRYMAPELLQGSYGTA---ADVFSLGLTILE-VACNMELPHGGEGWQQ 263
Query: 355 V---YFP 358
+ Y P
Sbjct: 264 LRQGYLP 270
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +EY HR +I+H D+KP N+LLD+ KI+DFGL+ + T + +S G
Sbjct: 121 IISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----G 173
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMI 335
+ Y A EV S + DV+S G+++
Sbjct: 174 SPNYAAPEVISGKL-YAGPEVDVWSCGVIL 202
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 184 SISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----YNGDTSKPCQYLRWEKM 239
++ + H ++V L+G E N +I E G L F+ Y+ D + Y
Sbjct: 67 TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY------ 119
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
++ L YL S R +H DI N+L+ + C K+ DFGL++ +S
Sbjct: 120 ---AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 173
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNNLDSG-VD 350
+ I ++A E S NF + SDV+ FG+ + E++ G KNN G ++
Sbjct: 174 --KGKLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 229
Query: 351 NSSEVYFP 358
N + P
Sbjct: 230 NGERLPMP 237
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNG--DTSKPCQYLRWEKMYEIVIGIAKGL 250
V G L+ +I E++ GS + G D ++ LR I KGL
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---------EILKGL 117
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
+YLH S + +H DIK N+LL + K++DFG+A T + + + GT ++
Sbjct: 118 DYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV---GTPFWM 171
Query: 311 ALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
A EV ++ K+D++S G+ +EL
Sbjct: 172 APEVIKQS--AYDSKADIWSLGITAIELA 198
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +EY HR +I+H D+KP N+LLD+ KI+DFGL+ + T + +S G
Sbjct: 112 IISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----G 164
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMI 335
+ Y A EV S + DV+S G+++
Sbjct: 165 SPNYAAPEVISGKL-YAGPEVDVWSCGVIL 193
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 14/104 (13%)
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLD---QDFCPKISDFGLAKLCTTKKGIVS 298
I+ + G+ Y+H+ +I+H D+KP N+LL+ +D +I DFGL+ K +
Sbjct: 155 IIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 211
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMI-MELVGC 341
+ GT YIA EV + E K DV+S G+++ + L GC
Sbjct: 212 KI----GTAYYIAPEVLHGTYDE---KCDVWSTGVILYILLSGC 248
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 194 VTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEKMYEIVI 244
+ L+ N L+ F P SLE+F VY + + S+ Q L E+M ++
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
+ G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 134 QMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT 178
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 17/153 (11%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 251
+VV G + + ++ E+ GS+ + + + L +++ I+ KGLE
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT-----LTEDEIATILQSTLKGLE 139
Query: 252 YLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIA 311
YLH R +H DIK NILL+ + K++DFG+A T + ++ GT ++A
Sbjct: 140 YLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI---GTPFWMA 193
Query: 312 LEVFSRNFGEVSHK--SDVYSFGMMIMELVGCK 342
EV E+ + +D++S G+ +E+ K
Sbjct: 194 PEVIQ----EIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 14/104 (13%)
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLD---QDFCPKISDFGLAKLCTTKKGIVS 298
I+ + G+ Y+H+ +I+H D+KP N+LL+ +D +I DFGL+ K +
Sbjct: 137 IIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 193
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMI-MELVGC 341
+ GT YIA EV + E K DV+S G+++ + L GC
Sbjct: 194 KI----GTAYYIAPEVLHGTYDE---KCDVWSTGVILYILLSGC 230
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 194 VTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEKMYEIVI 244
+ L+ N L+ F P SLE+F VY + + S+ Q L E+M ++
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
+ G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 134 QMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT 178
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM--YEIVIGIA 247
H +++ L + ++ E++ G L ++ C++ R E+M + I
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--------CKHGRVEEMEARRLFQQIL 121
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
++Y HR ++H D+KP N+LLD KI+DFGL+ + + + + +S G+
Sbjct: 122 SAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC----GSP 174
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
Y A EV S + D++S G+++ L+
Sbjct: 175 NYAAPEVISGRL-YAGPEVDIWSCGVILYALL 205
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
L + + S +V L G EG + E + GSL + + K L ++
Sbjct: 115 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI------KQMGCLPEDRALY 168
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFC-PKISDFGLAKLCTTKKGIVSSL 300
+ +GLEYLH + RILH D+K N+LL D + DFG A LC G+ SL
Sbjct: 169 YLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSL 224
Query: 301 LGAR---GTIGYIALEVFSRNFGEVSHKSDVYSF-GMMIMELVGC 341
L GT ++A EV K D++S MM+ L GC
Sbjct: 225 LTGDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNGC 267
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
L E+ G L K++ + C L+ + ++ I+ L YLH RI+H D+K
Sbjct: 95 LAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLK 148
Query: 268 PHNILLD---QDFCPKISDFGLAK------LCTTKKGIVSSLLGARGTIGYIALEVFSRN 318
P NI+L Q KI D G AK LCT GT+ Y+A E+ +
Sbjct: 149 PENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE----------FVGTLQYLAPELLEQK 198
Query: 319 FGEVSHKSDVYSFGMMIMELV 339
V+ D +SFG + E +
Sbjct: 199 KYTVT--VDYWSFGTLAFECI 217
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
Query: 208 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIK 267
L E+ G L K++ + C L+ + ++ I+ L YLH RI+H D+K
Sbjct: 96 LAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLK 149
Query: 268 PHNILLD---QDFCPKISDFGLAK------LCTTKKGIVSSLLGARGTIGYIALEVFSRN 318
P NI+L Q KI D G AK LCT GT+ Y+A E+ +
Sbjct: 150 PENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE----------FVGTLQYLAPELLEQK 199
Query: 319 FGEVSHKSDVYSFGMMIMELV 339
V+ D +SFG + E +
Sbjct: 200 KYTVT--VDYWSFGTLAFECI 218
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 24/120 (20%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSKPCQY 233
L + +H N+++LL F P +LE+F VY + + + Q
Sbjct: 74 LVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQM 121
Query: 234 -LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
L E+M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 122 ELDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT 178
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 13/103 (12%)
Query: 188 TSHVNVVTLLGFCLEGNNRA--LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG 245
+ H N+V LL N+R L++++M V + +P K Y +V
Sbjct: 66 SGHENIVNLLNVLRADNDRDVYLVFDYMETDL--HAVIRANILEPVH-----KQY-VVYQ 117
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK 288
+ K ++YLH G +LH D+KP NILL+ + K++DFGL++
Sbjct: 118 LIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 196 LLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIG 245
LL N L+ F P SLE+F VY D + Q L + + ++
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQ 133
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I +GL+Y+H S I+H D+KP N+ +++D KI DFGL + + + G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE------MTGYVA 184
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 343
T Y A E+ N+ + D++S G ++ EL+ +
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
L + + S +V L G EG + E + GSL + + K L ++
Sbjct: 117 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI------KQMGCLPEDRALY 170
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFC-PKISDFGLAKLCTTKKGIVSSL 300
+ +GLEYLH + RILH D+K N+LL D + DFG A LC G+ SL
Sbjct: 171 YLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSL 226
Query: 301 LGAR---GTIGYIALEVFSRNFGEVSHKSDVYSF-GMMIMELVGC 341
L GT ++A EV K D++S MM+ L GC
Sbjct: 227 LTGDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNGC 269
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
L + + S +V L G EG + E + GSL + + K L ++
Sbjct: 101 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI------KQMGCLPEDRALY 154
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFC-PKISDFGLAKLCTTKKGIVSSL 300
+ +GLEYLH + RILH D+K N+LL D + DFG A LC G+ SL
Sbjct: 155 YLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSL 210
Query: 301 LGAR---GTIGYIALEVFSRNFGEVSHKSDVYSF-GMMIMELVGC 341
L GT ++A EV K D++S MM+ L GC
Sbjct: 211 LTGDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNGC 253
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 35/202 (17%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV--YNGDTSKPCQYLRWEKMYEI 242
+ H N+V L L++EF + L+K+ NGD L E +
Sbjct: 55 LKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD-------LDPEIVKSF 106
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
+ + KGL + H S +LH D+KP N+L++++ K++DFGLA+ GI
Sbjct: 107 LFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLARAF----GIPVRCYS 159
Query: 303 AR-GTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPH 359
A T+ Y +V FG + + D++S G + EL L G D ++
Sbjct: 160 AEVVTLWYRPPDVL---FGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQL---- 212
Query: 360 WIYRHVEQDREFKLLGVVTKKE 381
R F+LLG T+++
Sbjct: 213 --------KRIFRLLGTPTEEQ 226
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 184 SISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIV 243
++ + H ++V L+G E N +I E G L F+ S L +
Sbjct: 64 TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS-----LDLASLILYA 117
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
++ L YL S R +H DI N+L+ C K+ DFGL++ +S
Sbjct: 118 YQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKAS--KG 172
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNNLDSG-VDNSSE 354
+ I ++A E S NF + SDV+ FG+ + E++ G KNN G ++N
Sbjct: 173 KLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 230
Query: 355 VYFP 358
+ P
Sbjct: 231 LPMP 234
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 31/164 (18%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQY----LRWEK 238
+H N+++LL F P +LE+F V + CQ L E+
Sbjct: 80 VNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHER 127
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T +
Sbjct: 128 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTP 184
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV-GC 341
++ T Y A EV G ++ D++S G ++ ELV GC
Sbjct: 185 YVV----TRYYRAPEVI-LGMGYAAN-VDIWSVGCIMGELVKGC 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 24/120 (20%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRW 236
L + +H N+++LL F P +LE+F V + CQ ++
Sbjct: 74 LVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQM 121
Query: 237 E----KMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
E +M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT 178
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 32/162 (19%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQY----LRWEK 238
+H N+++LL F P +LE+F V + CQ L E+
Sbjct: 78 VNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHER 125
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ +T +
Sbjct: 126 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTP 182
Query: 299 SLLGARGTIGYIALEV-FSRNFGEVSHKSDVYSFGMMIMELV 339
++ T Y A EV + E D++S G ++ ELV
Sbjct: 183 YVV----TRYYRAPEVILGMGYKE---NVDIWSVGCIMGELV 217
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E+MP G + + G S+P + Y I + EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 158
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+L+DQ K++DFG AK KG L GT Y+A E
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV---KGRTWXLC---GTPEYLAPEI 209
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 210 ILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E+MP G + + G S+P + Y I + EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 158
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+L+DQ K++DFG AK KG L GT Y+A E
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV---KGRTWXLC---GTPEYLAPEI 209
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 210 ILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 21/169 (12%)
Query: 184 SISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIV 243
++ + H ++V L+G E N +I E G L F+ S L +
Sbjct: 444 TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS-----LDLASLILYA 497
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
++ L YL S R +H DI N+L+ + C K+ DFGL++ +S
Sbjct: 498 YQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS--KG 552
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNN 344
+ I ++A E S NF + SDV+ FG+ + E++ G KNN
Sbjct: 553 KLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 194 VTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEKMYEIVI 244
+ L+ N L+ F P SLE+F VY + + S+ Q L E+M ++
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
+ G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT 178
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 18/152 (11%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM--YEIVIGIA 247
H +++ L + ++ E++ G L ++ C++ R E+M + I
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--------CKHGRVEEMEARRLFQQIL 121
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
++Y HR ++H D+KP N+LLD KI+DFGL+ + + + + S G+
Sbjct: 122 SAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC----GSP 174
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
Y A EV S + D++S G+++ L+
Sbjct: 175 NYAAPEVISGRL-YAGPEVDIWSCGVILYALL 205
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I GL++LH S I++ D+K NILLD+D KI+DFG+ K + G
Sbjct: 128 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC---G 181
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T YIA E+ + +H D +SFG+++ E++
Sbjct: 182 TPDYIAPEILLGQ--KYNHSVDWWSFGVLLYEML 213
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 27/190 (14%)
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
+G++YLH + R++H D+K N+ L+ D KI DFGLA +L GT
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC---GTP 206
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQ 367
YIA EV + S + D++S G ++ L+ K ++ + + Y
Sbjct: 207 NYIAPEVLCKKGH--SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS---- 260
Query: 368 DREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI--EMLQGSTEALQIPPT 425
V + N +A +I + A P RP + E++ E +++ PT
Sbjct: 261 ---------VPRHINPVASALI---RRMLHADPTLRPSVAELLTDEFFTSGYAPMRL-PT 307
Query: 426 PFLSSPPRAS 435
L+ PPR S
Sbjct: 308 SCLTVPPRFS 317
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEK 238
+H N+++LL F P +LE+F VY + + + Q L E+
Sbjct: 80 VNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER 127
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 128 MSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT 178
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIG 308
+EY HR +I+H D+KP N+LLD + KI+DFGL+ + T + +S G+
Sbjct: 120 AIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC----GSPN 172
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMI-MELVG 340
Y A EV + + DV+S G+++ + LVG
Sbjct: 173 YAAPEVINGKL-YAGPEVDVWSCGIVLYVMLVG 204
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEK 238
+H N++ LL F P SLE+F VY + + S+ Q L E+
Sbjct: 80 VNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 128 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT 178
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 85/205 (41%), Gaps = 22/205 (10%)
Query: 144 LPLKRYNFSDVKKITNSFKDXXXXXXXXXXXXXXXXDGLASISRTSHVNVVTLLGFCLEG 203
L L R +F +V ++ + + +A TS +V L G EG
Sbjct: 80 LRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS-PRIVPLYGAVREG 138
Query: 204 NNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA-KGLEYLHRGCSTRIL 262
+ E + GSL + V Q E +G A +GLEYLH S RIL
Sbjct: 139 PWVNIFMELLEGGSLGQLVKE-------QGCLPEDRALYYLGQALEGLEYLH---SRRIL 188
Query: 263 HFDIKPHNILLDQDFC-PKISDFGLAKLCTTKKGIVSSLLGAR---GTIGYIALE-VFSR 317
H D+K N+LL D + DFG A +C G+ LL GT ++A E V R
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGR 247
Query: 318 NFGEVSHKSDVYSF-GMMIMELVGC 341
+ K DV+S MM+ L GC
Sbjct: 248 S---CDAKVDVWSSCCMMLHMLNGC 269
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----YNGDTSKPCQYLRWE 237
++ +++ H N++ L N+ L+ E++ G L + YN +++
Sbjct: 137 ISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK-- 194
Query: 238 KMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNIL-LDQDFCP-KISDFGLAKLCTTKKG 295
I +G+ ++H+ ILH D+KP NIL +++D KI DFGLA+ ++
Sbjct: 195 -------QICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK 244
Query: 296 IVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMI-MELVGCKNNLDSGVDNSSE 354
+ + GT ++A EV + +F VS +D++S G++ M L G L DN +E
Sbjct: 245 LKVNF----GTPEFLAPEVVNYDF--VSFPTDMWSVGVIAYMLLSGLSPFLG---DNDAE 295
Query: 355 VYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPP 405
R +D EF+ + K+ I+K +I W I A + P
Sbjct: 296 TLNNILACRWDLEDEEFQDISEEAKE--FISKLLIKEKSWRISASEALKHP 344
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEK 238
+H N+++LL F P +LE+F VY + + + Q L E+
Sbjct: 73 VNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER 120
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 121 MSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT 171
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I G++Y HR ++H D+KP N+LLD KI+DFGL+ + + + + S G
Sbjct: 125 ILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC----G 177
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ Y A EV S + D++S G+++ L+
Sbjct: 178 SPNYAAPEVISGRL-YAGPEVDIWSSGVILYALL 210
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H ++V L+G +E +I E P G L ++ S L+ + + I K
Sbjct: 68 HPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS-----LKVLTLVLYSLQICKA 121
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
+ YL S +H DI NIL+ C K+ DFGL++ + +S+ R I +
Sbjct: 122 MAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV--TRLPIKW 176
Query: 310 IALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
++ E S NF + SDV+ F + + E++
Sbjct: 177 MSPE--SINFRRFTTASDVWMFAVCMWEILS 205
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 97/254 (38%), Gaps = 38/254 (14%)
Query: 183 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQY--------- 233
A ++ + N+V LLG C G L++E+M G L +F+ + C
Sbjct: 102 ALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRA 161
Query: 234 ---------LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDF 284
L + I +A G+ YL + +H D+ N L+ ++ KI+DF
Sbjct: 162 RVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADF 218
Query: 285 GLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNN 344
GL++ + + I + S + + +SDV+++G+++ E+
Sbjct: 219 GLSRNIYSADYYKAD---GNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 275
Query: 345 LDSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRP 404
G+ + +Y+ R+ +L E+ M + C P DRP
Sbjct: 276 PYYGMAHEEVIYY----------VRDGNILACPENCPLELYNLMRL----CWSKLPADRP 321
Query: 405 PMNEVIEMLQGSTE 418
+ +LQ E
Sbjct: 322 SFCSIHRILQRMCE 335
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H ++V L+G +E +I E P G L ++ S L+ + + I K
Sbjct: 84 HPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS-----LKVLTLVLYSLQICKA 137
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
+ YL S +H DI NIL+ C K+ DFGL++ + +S+ R I +
Sbjct: 138 MAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV--TRLPIKW 192
Query: 310 IALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
++ E S NF + SDV+ F + + E++
Sbjct: 193 MSPE--SINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 27/190 (14%)
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
+G++YLH + R++H D+K N+ L+ D KI DFGLA L GT
Sbjct: 137 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC---GTP 190
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQ 367
YIA EV + S + D++S G ++ L+ K ++ + + Y
Sbjct: 191 NYIAPEVLCKKGH--SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS---- 244
Query: 368 DREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI--EMLQGSTEALQIPPT 425
V + N +A +I + A P RP + E++ E +++ PT
Sbjct: 245 ---------VPRHINPVASALI---RRMLHADPTLRPSVAELLTDEFFTSGYAPMRL-PT 291
Query: 426 PFLSSPPRAS 435
L+ PPR S
Sbjct: 292 SCLTVPPRFS 301
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I GL++LH S I++ D+K NILLD+D KI+DFG+ K + G
Sbjct: 127 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC---G 180
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T YIA E+ + +H D +SFG+++ E++
Sbjct: 181 TPDYIAPEILLGQ--KYNHSVDWWSFGVLLYEML 212
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I LEYLH S +++ DIK N++LD+D KI+DFGL K + + + G
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC---G 167
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y+A EV N + D + G+++ E++
Sbjct: 168 TPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 199
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLD---QDFCPKISDFGLAKLCTTKKGIVS 298
I+ + G+ Y H+ +I+H D+KP N+LL+ +D +I DFGL+ K
Sbjct: 131 IIRQVLSGITYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKD 187
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMI-MELVGC 341
+ GT YIA EV + E K DV+S G+++ + L GC
Sbjct: 188 KI----GTAYYIAPEVLHGTYDE---KCDVWSTGVILYILLSGC 224
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 72/167 (43%), Gaps = 22/167 (13%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H +VV E ++ + E+ GSL + + + Y + ++ ++++ + +G
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGRG 123
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISD--------------FGLAKLCTTKKG 295
L Y+H S ++H DIKP NI + + P + F + L +
Sbjct: 124 LRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR- 179
Query: 296 IVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
+SS G ++A EV N+ + K+D+++ + ++ G +
Sbjct: 180 -ISSPQVEEGDSRFLANEVLQENYTHLP-KADIFALALTVVXAAGAE 224
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I LEYLH S +++ DIK N++LD+D KI+DFGL K + + + G
Sbjct: 117 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC---G 170
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y+A EV N + D + G+++ E++
Sbjct: 171 TPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I LEYLH S +++ DIK N++LD+D KI+DFGL K + + + G
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC---G 167
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y+A EV N + D + G+++ E++
Sbjct: 168 TPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 199
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
+ ++ H ++ L N ++ E+ P G L ++ + D L E+
Sbjct: 59 IEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR------LSEEETRV 112
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS-SL 300
+ I + Y+H S H D+KP N+L D+ K+ DFG LC KG L
Sbjct: 113 VFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFG---LCAKPKGNKDYHL 166
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G++ Y A E+ + + ++DV+S G+++ L+
Sbjct: 167 QTCCGSLAYAAPELI-QGKSYLGSEADVWSMGILLYVLM 204
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H ++V L+G +E +I E P G L ++ S L+ + + I K
Sbjct: 72 HPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS-----LKVLTLVLYSLQICKA 125
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
+ YL S +H DI NIL+ C K+ DFGL++ + +S+ R I +
Sbjct: 126 MAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV--TRLPIKW 180
Query: 310 IALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
++ E S NF + SDV+ F + + E++
Sbjct: 181 MSPE--SINFRRFTTASDVWMFAVCMWEILS 209
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
++ H N+V LL NN ++ EF G+++ + + +P L ++ +
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML--ELERP---LTESQIQVVCK 142
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
L YLH +I+H D+K NIL D K++DFG++ T S +
Sbjct: 143 QTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI--- 196
Query: 305 GTIGYIALEVF---SRNFGEVSHKSDVYSFGMMIMELV 339
GT ++A EV + +K+DV+S G+ ++E+
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMY 240
++ + +H N+V LL N L++E + + L+ F+ + T P ++
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIK----- 105
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
+ + +GL + H S R+LH D+KP N+L++ + K++DFGLA+ V +
Sbjct: 106 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTY 159
Query: 301 LGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNL--DSGVDNSSEVY 356
T+ Y A E+ S D++S G + E+V + DS +D ++
Sbjct: 160 THEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 27/190 (14%)
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
+G++YLH + R++H D+K N+ L+ D KI DFGLA L GT
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC---GTP 206
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQ 367
YIA EV + S + D++S G ++ L+ K ++ + + Y
Sbjct: 207 NYIAPEVLCKKGH--SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS---- 260
Query: 368 DREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI--EMLQGSTEALQIPPT 425
V + N +A +I + A P RP + E++ E +++ PT
Sbjct: 261 ---------VPRHINPVASALI---RRMLHADPTLRPSVAELLTDEFFTSGYAPMRL-PT 307
Query: 426 PFLSSPPRAS 435
L+ PPR S
Sbjct: 308 SCLTVPPRFS 317
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
++ H N+V LL NN ++ EF G+++ + + +P L ++ +
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML--ELERP---LTESQIQVVCK 142
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
L YLH +I+H D+K NIL D K++DFG++ T S +
Sbjct: 143 QTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI--- 196
Query: 305 GTIGYIALEVF---SRNFGEVSHKSDVYSFGMMIMELV 339
GT ++A EV + +K+DV+S G+ ++E+
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEK 238
+H N++ LL F P SLE+F VY + + S+ Q L E+
Sbjct: 80 VNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 128 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
+A+G+E+L S + +H D+ NILL ++ KI DFGLA+ V R
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK-GDTRL 263
Query: 306 TIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRH 364
+ ++A E +F + + S KSDV+S+G+++ E+ + Y
Sbjct: 264 PLKWMAPESIFDKIY---STKSDVWSYGVLLWEIFSLGGS----------------PYPG 304
Query: 365 VEQDREF--KLLGVVTKKENEIAKKMII-VGLWCIQARPYDRPPMNEVIEML 413
V+ D +F +L + + E + I + L C P +RP E++E L
Sbjct: 305 VQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 38/183 (20%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N++ LL F P SLE+F V + CQ ++ E +
Sbjct: 80 VNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 127
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T +
Sbjct: 128 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP 184
Query: 299 SLLGARGTIGYIALEV-FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYF 357
++ T Y A EV + E D++S G ++ E+V C L G D Y
Sbjct: 185 EVV----TRYYRAPEVILGMGYKE---NVDIWSVGCIMGEMV-CHKILFPGRD-----YI 231
Query: 358 PHW 360
W
Sbjct: 232 DQW 234
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 211 EFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHN 270
E M GSL++ + K + + + ++ I + KGL YL +I+H D+KP N
Sbjct: 103 EHMDGGSLDQVL------KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSN 154
Query: 271 ILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYS 330
IL++ K+ DFG++ + +S +G R Y++ E S +SD++S
Sbjct: 155 ILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTR---SYMSPERLQGT--HYSVQSDIWS 207
Query: 331 FGMMIMELVGCKNNLDSG 348
G+ ++E+ + + SG
Sbjct: 208 MGLSLVEMAVGRYPIGSG 225
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V G ++ E M GSL++ + K + + + ++ I + KGL Y
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVL------KKAGRIPEQILGKVSIAVIKGLTY 181
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L +I+H D+KP NIL++ K+ DFG++ + +S +G R Y++
Sbjct: 182 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTR---SYMSP 234
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIMELV 339
E V +SD++S G+ ++E+
Sbjct: 235 ERLQGTHYSV--QSDIWSMGLSLVEMA 259
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 27/190 (14%)
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
+G++YLH + R++H D+K N+ L+ D KI DFGLA L GT
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC---GTP 206
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQ 367
YIA EV + S + D++S G ++ L+ K ++ + + Y
Sbjct: 207 NYIAPEVLCKKGH--SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS---- 260
Query: 368 DREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI--EMLQGSTEALQIPPT 425
V + N +A +I + A P RP + E++ E +++ PT
Sbjct: 261 ---------VPRHINPVASALI---RRMLHADPTLRPSVAELLTDEFFTSGYAPMRL-PT 307
Query: 426 PFLSSPPRAS 435
L+ PPR S
Sbjct: 308 SCLTVPPRFS 317
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KM 239
+H N+++LL F P +LE+F V + CQ ++ E +M
Sbjct: 119 NHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 166
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 167 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 32/162 (19%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N++ LL F P SLE+F V + CQ ++ E +
Sbjct: 82 VNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 129
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T +V
Sbjct: 130 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVP 186
Query: 299 SLLGARGTIGYIALEV-FSRNFGEVSHKSDVYSFGMMIMELV 339
++ T Y A EV + E D++S G ++ E++
Sbjct: 187 FVV----TRYYRAPEVILGMGYKE---NVDIWSVGCIMGEMI 221
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 21/169 (12%)
Query: 184 SISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIV 243
++ + H ++V L+G E N +I E G L F+ S L +
Sbjct: 444 TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS-----LDLASLILYA 497
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGA 303
++ L YL S R +H DI N+L+ C K+ DFGL++ +S
Sbjct: 498 YQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKAS--KG 552
Query: 304 RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNN 344
+ I ++A E S NF + SDV+ FG+ + E++ G KNN
Sbjct: 553 KLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 24/120 (20%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY------NGDTSKPCQY 233
L + +H N+++LL F P +LE+F VY + + + Q
Sbjct: 74 LVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQM 121
Query: 234 -LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
L E+M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT 178
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N+++LL F P +LE+F V + CQ ++ E +
Sbjct: 81 VNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 128
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 129 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 32/165 (19%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N+++LL F P +LE+F V + CQ ++ E +
Sbjct: 80 VNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 127
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T +
Sbjct: 128 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 184
Query: 299 SLLGARGTIGYIALEV-FSRNFGEVSHKSDVYSFGMMIMELVGCK 342
++ T Y A EV + E D++S G ++ E+V K
Sbjct: 185 YVV----TRYYRAPEVILGMGYKE---NVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N+++LL F P +LE+F V + CQ ++ E +
Sbjct: 81 VNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 128
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 129 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 32/165 (19%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N+++LL F P +LE+F V + CQ ++ E +
Sbjct: 74 VNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 121
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T +
Sbjct: 122 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 178
Query: 299 SLLGARGTIGYIALEV-FSRNFGEVSHKSDVYSFGMMIMELVGCK 342
++ T Y A EV + E D++S G ++ E+V K
Sbjct: 179 YVV----TRYYRAPEVILGMGYKE---NVDIWSVGCIMGEMVRHK 216
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 32/165 (19%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N+++LL F P +LE+F V + CQ ++ E +
Sbjct: 74 VNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 121
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T +
Sbjct: 122 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 178
Query: 299 SLLGARGTIGYIALEV-FSRNFGEVSHKSDVYSFGMMIMELVGCK 342
++ T Y A EV + E D++S G ++ E+V K
Sbjct: 179 YVV----TRYYRAPEVILGMGYKE---NVDIWSVGCIMGEMVRHK 216
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N+++LL F P +LE+F V + CQ ++ E +
Sbjct: 80 VNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 127
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 128 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N+++LL F P +LE+F V + CQ ++ E +
Sbjct: 79 VNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 126
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 127 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 177
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N+++LL F P +LE+F V + CQ ++ E +
Sbjct: 118 VNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 165
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 166 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V G ++ E M GSL++ + K + + + ++ I + KGL Y
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL------KKAGRIPEQILGKVSIAVIKGLTY 119
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L +I+H D+KP NIL++ K+ DFG++ + +S +G R Y++
Sbjct: 120 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTR---SYMSP 172
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIMELV 339
E V +SD++S G+ ++E+
Sbjct: 173 ERLQGTHYSV--QSDIWSMGLSLVEMA 197
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
++ H N+V LL NN ++ EF G+++ + + +P L ++ +
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML--ELERP---LTESQIQVVCK 115
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
L YLH +I+H D+K NIL D K++DFG++ T + +
Sbjct: 116 QTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT--RTXIQRRDSFI 170
Query: 305 GTIGYIALEVF---SRNFGEVSHKSDVYSFGMMIMELV 339
GT ++A EV + +K+DV+S G+ ++E+
Sbjct: 171 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 208
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 124 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 176 GEPNVSXICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
Query: 349 VDNSSEV 355
VD E+
Sbjct: 229 VDQLVEI 235
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V G ++ E M GSL++ + K + + + ++ I + KGL Y
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL------KKAGRIPEQILGKVSIAVIKGLTY 119
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L +I+H D+KP NIL++ K+ DFG++ + +S +G R Y++
Sbjct: 120 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTR---SYMSP 172
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIMELV 339
E V +SD++S G+ ++E+
Sbjct: 173 ERLQGTHYSV--QSDIWSMGLSLVEMA 197
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I LEYLH S +++ DIK N++LD+D KI+DFGL K + + G
Sbjct: 119 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---G 172
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y+A EV N + D + G+++ E++
Sbjct: 173 TPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 204
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 124 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 176 GEPNVSXICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
Query: 349 VDNSSEV 355
VD E+
Sbjct: 229 VDQLVEI 235
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 124 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 176 GEPNVSXICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
Query: 349 VDNSSEV 355
VD E+
Sbjct: 229 VDQLVEI 235
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 32/165 (19%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N+++LL F P +LE+F V + CQ ++ E +
Sbjct: 73 VNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER 120
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVS 298
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T +
Sbjct: 121 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 177
Query: 299 SLLGARGTIGYIALEV-FSRNFGEVSHKSDVYSFGMMIMELVGCK 342
++ T Y A EV + E D++S G ++ E+V K
Sbjct: 178 YVV----TRYYRAPEVILGMGYKE---NVDIWSVGCIMGEMVRHK 215
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 65 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 124
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 125 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 176
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 177 GEPNVSXICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 229
Query: 349 VDNSSEV 355
VD E+
Sbjct: 230 VDQLVEI 236
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 14/97 (14%)
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP----KISDFGLAKLCTTKKGIV 297
++ I +G+ YLH+ I+H D+KP NILL + P KI DFG+++ K G
Sbjct: 136 LIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIY-PLGDIKIVDFGMSR----KIGHA 187
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
L GT Y+A E+ N+ ++ +D+++ G++
Sbjct: 188 CELREIMGTPEYLAPEIL--NYDPITTATDMWNIGII 222
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 22/150 (14%)
Query: 194 VTLLGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLE 251
+T L F + N N ++ E+ P G + + G S+P + Y I + E
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FE 156
Query: 252 YLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIA 311
YLH S +++ D+KP N+++DQ K++DFG AK KG L GT Y+A
Sbjct: 157 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC---GTPEYLA 207
Query: 312 LE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
E + S+ + + D ++ G++I E+
Sbjct: 208 PEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N++ LL F P SLE+F V + CQ ++ E +
Sbjct: 80 VNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 127
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 128 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 83 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 142
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 143 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 194
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 195 GEPNVSXICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 247
Query: 349 VDNSSEV 355
VD E+
Sbjct: 248 VDQLVEI 254
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N++ LL F P SLE+F V + CQ ++ E +
Sbjct: 80 VNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 127
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 128 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N++ LL F P SLE+F V + CQ ++ E +
Sbjct: 85 VNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 132
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 133 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 183
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 263 HFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEV 322
H D+KP NIL+ D + DFG+A T +K ++ L GT+ Y A E FS +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEK--LTQLGNTVGTLYYXAPERFSES--HA 212
Query: 323 SHKSDVYSFGMMIME 337
++++D+Y+ ++ E
Sbjct: 213 TYRADIYALTCVLYE 227
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I LEYLH S +++ DIK N++LD+D KI+DFGL K + + G
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---G 167
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y+A EV N + D + G+++ E++
Sbjct: 168 TPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 199
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N++ LL F P SLE+F V + CQ ++ E +
Sbjct: 81 VNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 128
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 129 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 32/223 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA--LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWE 237
+A + H NV++L L +R L++++ + + KF +K L
Sbjct: 69 IALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRG 128
Query: 238 KMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILL----DQDFCPKISDFGLAKLCTTK 293
+ ++ I G+ YLH + +LH D+KP NIL+ + KI+D G A+L +
Sbjct: 129 MVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 294 KGIVSSLLGARGTIGYIALEVF--SRNFGEVSHKSDVYSFGMMIMELVG------CKNNL 345
++ L T Y A E+ +R++ + D+++ G + EL+ C+
Sbjct: 186 LKPLADLDPVVVTFWYRAPELLLGARHYTKAI---DIWAIGCIFAELLTSEPIFHCRQE- 241
Query: 346 DSGVDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKENEIAKKM 388
D N Y H + DR F ++G K+ E KKM
Sbjct: 242 DIKTSNP---------YHHDQLDRIFNVMGFPADKDWEDIKKM 275
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 22/150 (14%)
Query: 194 VTLLGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLE 251
+T L F + N N ++ E+ P G + + G S+P + Y I + E
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FE 156
Query: 252 YLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIA 311
YLH S +++ D+KP N+++DQ K++DFG AK KG L GT Y+A
Sbjct: 157 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC---GTPEYLA 207
Query: 312 LE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
E + S+ + + D ++ G++I E+
Sbjct: 208 PEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 47/242 (19%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNGSLEKFVYNGDTSKPCQYLR 235
L + + H N+V L F + L+ +++P ++ + + +K +
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVI 122
Query: 236 WEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKK 294
+ K+Y + + + L Y+H S I H DIKP N+LLD D K+ DFG AK +
Sbjct: 123 YVKLY--MYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 295 GIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVD 350
VS + Y A E+ FG + S DV+S G ++ EL+ + DSGVD
Sbjct: 178 PNVSXICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 351 NSSEVYFPHWIYRHVEQDREFKLLGVVTKKE--------NEIAKKMIIVGLWCIQARPYD 402
E+ K+LG T+++ E A I W RP
Sbjct: 231 QLVEI---------------IKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRT 275
Query: 403 RP 404
P
Sbjct: 276 PP 277
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 26/181 (14%)
Query: 237 EKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGI 296
E + +I + K L +L + +I+H DIKP NILLD+ K+ DFG++ +
Sbjct: 125 EILGKITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGIS------GQL 176
Query: 297 VSSLLGAR--GTIGYIALEVFSRNFGEVSH--KSDVYSFGMMIMELVGCKNNLDSGVDNS 352
V S+ R G Y+A E + + +SDV+S G+ + EL +
Sbjct: 177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELA------------T 224
Query: 353 SEVYFPHW--IYRHVEQDREFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRPPMNEVI 410
+P W ++ + Q + + +E E + I C+ RP E++
Sbjct: 225 GRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
Query: 411 E 411
+
Sbjct: 285 K 285
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N++ LL F P SLE+F V + CQ ++ E +
Sbjct: 80 VNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 127
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 128 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N++ LL F P SLE+F V + CQ ++ E +
Sbjct: 80 VNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 127
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 128 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 76 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 135
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 136 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 187
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 188 GEPNVSXICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 240
Query: 349 VDNSSEV 355
VD E+
Sbjct: 241 VDQLVEI 247
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 76 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 135
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 136 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 187
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 188 GEPNVSXICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 240
Query: 349 VDNSSEV 355
VD E+
Sbjct: 241 VDQLVEI 247
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 68 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 127
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 128 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 179
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 180 GEPNVSXICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 232
Query: 349 VDNSSEV 355
VD E+
Sbjct: 233 VDQLVEI 239
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V G ++ E M GSL++ + K + + + ++ I + KGL Y
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL------KKAGRIPEQILGKVSIAVIKGLTY 119
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L +I+H D+KP NIL++ K+ DFG++ + +S +G R Y++
Sbjct: 120 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTR---SYMSP 172
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIMELV 339
E V +SD++S G+ ++E+
Sbjct: 173 ERLQGTHYSV--QSDIWSMGLSLVEMA 197
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 72 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 131
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 132 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 183
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 184 GEPNVSXICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 236
Query: 349 VDNSSEV 355
VD E+
Sbjct: 237 VDQLVEI 243
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 137
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ K R
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-----YNVRVASR 189
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y + + + D++S G M ++ K G DN ++
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 24/114 (21%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----K 238
+H N++ LL F P SLE+F V + CQ ++ E +
Sbjct: 74 VNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 121
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
M ++ + G+++LH S I+H D+KP NI++ D KI DFGLA+ T
Sbjct: 122 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 172
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I LEYLH S +++ DIK N++LD+D KI+DFGL K + + G
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---G 167
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y+A EV N + D + G+++ E++
Sbjct: 168 TPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 199
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E+ P G + + G S+P + Y I + EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 158
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+++DQ K++DFGLAK KG L GT Y+A E
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV---KGRTWXLC---GTPEYLAPEI 209
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 210 ILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 98 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 157
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 158 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 210 GEPNVSXICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 262
Query: 349 VDNSSEV 355
VD E+
Sbjct: 263 VDQLVEI 269
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I LEYLH S +++ DIK N++LD+D KI+DFGL K + + G
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---G 167
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y+A EV N + D + G+++ E++
Sbjct: 168 TPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 199
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 138
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ K R
Sbjct: 139 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-----YNVRVASR 190
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y + + + D++S G M ++ K G DN ++
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 237
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+L+D + ++ D+GLA+ + R
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASR 195
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y ++ + D++S G M+ ++ K G DN ++
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 137
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ K R
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-----YNVRVASR 189
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y + + + D++S G M ++ K G DN ++
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 137
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ K R
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-----YNVRVASR 189
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y + + + D++S G M ++ K G DN ++
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 138
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ K R
Sbjct: 139 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-----YNVRVASR 190
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y + + + D++S G M ++ K G DN ++
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 237
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 158
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ K R
Sbjct: 159 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-----YNVRVASR 210
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y + + + D++S G M ++ K G DN ++
Sbjct: 211 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 257
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 137
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ K R
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-----YNVRVASR 189
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y + + + D++S G M ++ K G DN ++
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 137
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ K R
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-----YNVRVASR 189
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y + + + D++S G M ++ K G DN ++
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 97/244 (39%), Gaps = 51/244 (20%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 124 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 176 GEPNVSYICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
Query: 349 VDNSSEVYFPHWIYRHVEQDREFKLLGVVTKKE--------NEIAKKMIIVGLWCIQARP 400
VD E+ K+LG T+++ E A I W RP
Sbjct: 229 VDQLVEI---------------IKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRP 273
Query: 401 YDRP 404
P
Sbjct: 274 RTPP 277
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 124 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 176 GEPNVSYICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
Query: 349 VDNSSEV 355
VD E+
Sbjct: 229 VDQLVEI 235
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V G ++ E M GSL++ + K + + + ++ I + KGL Y
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL------KKAGRIPEQILGKVSIAVIKGLTY 119
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L +I+H D+KP NIL++ K+ DFG++ + +S +G R Y++
Sbjct: 120 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTR---SYMSP 172
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIMELV 339
E S +SD++S G+ ++E+
Sbjct: 173 ERLQGT--HYSVQSDIWSMGLSLVEMA 197
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V G ++ E M GSL++ + K + + + ++ I + KGL Y
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL------KKAGRIPEQILGKVSIAVIKGLTY 119
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L +I+H D+KP NIL++ K+ DFG++ + +S +G R Y++
Sbjct: 120 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTR---SYMSP 172
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIMELV 339
E S +SD++S G+ ++E+
Sbjct: 173 ERLQGT--HYSVQSDIWSMGLSLVEMA 197
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 15/133 (11%)
Query: 207 ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDI 266
++ E M GSL++ + K + + + ++ I + KGL YL +I+H D+
Sbjct: 107 SICMEHMDGGSLDQVL------KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDV 158
Query: 267 KPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS 326
KP NIL++ K+ DFG++ + +S +G R Y++ E V +S
Sbjct: 159 KPSNILVNSRGEIKLCDFGVSGQLID--SMANSFVGTR---SYMSPERLQGTHYSV--QS 211
Query: 327 DVYSFGMMIMELV 339
D++S G+ ++E+
Sbjct: 212 DIWSMGLSLVEMA 224
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 158
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+L+DQ K++DFG AK KG L GT Y+A E
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV---KGRTWXLC---GTPEYLAPEI 209
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 210 ILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 137
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ K R
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-----YNVRVASR 189
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y + + + D++S G M ++ K G DN ++
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 139
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ K R
Sbjct: 140 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-----YNVRVASR 191
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y + + + D++S G M ++ K G DN ++
Sbjct: 192 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 238
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 124 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 176 GEPNVSYICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
Query: 349 VDNSSEV 355
VD E+
Sbjct: 229 VDQLVEI 235
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 77 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 136
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 137 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 188
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 189 GEPNVSYICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 241
Query: 349 VDNSSEV 355
VD E+
Sbjct: 242 VDQLVEI 248
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 35/202 (17%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV--YNGDTSKPCQYLRWEKMYEI 242
+ H N+V L L++EF + L+K+ NGD L E +
Sbjct: 55 LKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD-------LDPEIVKSF 106
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
+ + KGL + H S +LH D+KP N+L++++ K+++FGLA+ GI
Sbjct: 107 LFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAF----GIPVRCYS 159
Query: 303 AR-GTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPH 359
A T+ Y +V FG + + D++S G + EL L G D ++
Sbjct: 160 AEVVTLWYRPPDVL---FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL---- 212
Query: 360 WIYRHVEQDREFKLLGVVTKKE 381
R F+LLG T+++
Sbjct: 213 --------KRIFRLLGTPTEEQ 226
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 185 ISRTSHVNVVTLLGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 242
I + + + L F + N N ++ E+ P G + + G S+P + Y
Sbjct: 95 IQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHA-----RFYAA 149
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLG 302
I + EYLH S +++ D+KP N+L+DQ K++DFG AK KG L
Sbjct: 150 QIVLT--FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV---KGRTWXLC- 200
Query: 303 ARGTIGYIALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
GT Y+A E + S+ + + D ++ G++I E+
Sbjct: 201 --GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 100 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 159
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 160 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 211
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 212 GEPNVSYICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 264
Query: 349 VDNSSEV 355
VD E+
Sbjct: 265 VDQLVEI 271
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 102 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 161
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 162 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 213
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 214 GEPNVSYICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 266
Query: 349 VDNSSEV 355
VD E+
Sbjct: 267 VDQLVEI 273
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 98 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 157
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 158 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 210 GEPNVSYICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 262
Query: 349 VDNSSEV 355
VD E+
Sbjct: 263 VDQLVEI 269
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 69 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 128
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 129 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 180
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 181 GEPNVSYICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 233
Query: 349 VDNSSEV 355
VD E+
Sbjct: 234 VDQLVEI 240
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + R
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASR 195
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y ++ + D++S G M+ ++ K G DN ++
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 159
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+L+DQ +++DFG AK KG +L GT Y+A E
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWTLC---GTPEYLAPEI 210
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 211 ILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + R
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASR 195
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y ++ + D++S G M+ ++ K G DN ++
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 72/167 (43%), Gaps = 22/167 (13%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H +VV E ++ + E+ GSL + + + Y + ++ ++++ + +G
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGRG 125
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISD--------------FGLAKLCTTKKG 295
L Y+H S ++H DIKP NI + + P + F + L +
Sbjct: 126 LRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR- 181
Query: 296 IVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
+SS G ++A EV N+ + K+D+++ + ++ G +
Sbjct: 182 -ISSPQVEEGDSRFLANEVLQENYTHLP-KADIFALALTVVCAAGAE 226
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 92 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 151
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 152 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 203
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 204 GEPNVSYICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 256
Query: 349 VDNSSEV 355
VD E+
Sbjct: 257 VDQLVEI 263
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 142
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + R
Sbjct: 143 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASR 194
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y ++ + D++S G M+ ++ K G DN ++
Sbjct: 195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 241
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 144
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+L+DQ +++DFG AK KG +L GT Y+A E
Sbjct: 145 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWTLC---GTPEYLAPEI 195
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 196 ILSKGYNKA---VDWWALGVLIYEMAA 219
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + R
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASR 195
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y ++ + D++S G M+ ++ K G DN ++
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 142
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + R
Sbjct: 143 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASR 194
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y ++ + D++S G M+ ++ K G DN ++
Sbjct: 195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 241
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 141
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + R
Sbjct: 142 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASR 193
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y ++ + D++S G M+ ++ K G DN ++
Sbjct: 194 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 240
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 72/167 (43%), Gaps = 22/167 (13%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H +VV E ++ + E+ GSL + + + Y + ++ ++++ + +G
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGRG 125
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISD--------------FGLAKLCTTKKG 295
L Y+H S ++H DIKP NI + + P + F + L +
Sbjct: 126 LRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR- 181
Query: 296 IVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
+SS G ++A EV N+ + K+D+++ + ++ G +
Sbjct: 182 -ISSPQVEEGDSRFLANEVLQENYTHLP-KADIFALALTVVCAAGAE 226
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
+ H N++ L L+++ M G L ++ T L ++ +I+ +
Sbjct: 81 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT------LSEKETRKIMRALL 134
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
+ + LH+ I+H D+KP NILLD D K++DFG + C G L GT
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPG--EKLRSVCGTP 187
Query: 308 GYIALEV----FSRNFGEVSHKSDVYSFGMMIMELVG 340
Y+A E+ + N + D++S G+++ L+
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRA------LIYEFMPNG--SLEKFVYNGDTSKPCQY 233
L + + H N+V L F + L+ +++P + + + P Y
Sbjct: 143 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 202
Query: 234 LRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTT 292
++ MY++ + L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 203 VKL-YMYQLF----RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 254
Query: 293 KKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSG 348
+ VS + Y A E+ FG + S DV+S G ++ EL+ + DSG
Sbjct: 255 GEPNVSYICSRY----YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 307
Query: 349 VDNSSEV 355
VD E+
Sbjct: 308 VDQLVEI 314
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + R
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASR 195
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y ++ + D++S G M+ ++ K G DN ++
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + R
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASR 195
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y ++ + D++S G M+ ++ K G DN ++
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + R
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASR 195
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y ++ + D++S G M+ ++ K G DN ++
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + R
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASR 195
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y ++ + D++S G M+ ++ K G DN ++
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + R
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASR 195
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y ++ + D++S G M+ ++ K G DN ++
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + R
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASR 195
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y ++ + D++S G M+ ++ K G DN ++
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 148
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + R
Sbjct: 149 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASR 200
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y ++ + D++S G M+ ++ K G DN ++
Sbjct: 201 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 247
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 72/167 (43%), Gaps = 22/167 (13%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H +VV E ++ + E+ GSL + + + Y + ++ ++++ + +G
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGRG 127
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISD--------------FGLAKLCTTKKG 295
L Y+H S ++H DIKP NI + + P + F + L +
Sbjct: 128 LRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR- 183
Query: 296 IVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 342
+SS G ++A EV N+ + K+D+++ + ++ G +
Sbjct: 184 -ISSPQVEEGDSRFLANEVLQENYTHLP-KADIFALALTVVCAAGAE 228
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H N+VTL + L++E++ + L++++ D + K++ + + +
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYL---DDCGNIINMHNVKLF--LFQLLR 111
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK 288
GL Y HR ++LH D+KP N+L+++ K++DFGLA+
Sbjct: 112 GLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
++ H N+V LL NN ++ EF G+++ + + +P L ++ +
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML--ELERP---LTESQIQVVCK 142
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
L YLH +I+H D+K NIL D K++DFG++ T +
Sbjct: 143 QTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI--- 196
Query: 305 GTIGYIALEVF---SRNFGEVSHKSDVYSFGMMIMELV 339
GT ++A EV + +K+DV+S G+ ++E+
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 193 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 252
+V G ++ E M GSL++ + K + + + ++ I + KGL Y
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVL------KKAGRIPEQILGKVSIAVIKGLTY 122
Query: 253 LHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIAL 312
L +I+H D+KP NIL++ K+ DFG++ + + + +G R Y++
Sbjct: 123 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE--MANEFVGTR---SYMSP 175
Query: 313 EVFSRNFGEVSHKSDVYSFGMMIMELV 339
E V +SD++S G+ ++E+
Sbjct: 176 ERLQGTHYSV--QSDIWSMGLSLVEMA 200
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 13/102 (12%)
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAKLCTTKKGIVS 298
I+ + G+ Y+H+ I+H D+KP NILL ++D KI DFGL+ C + +
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMK 181
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ GT YIA EV + E K DV+S G+++ L+
Sbjct: 182 DRI---GTAYYIAPEVLRGTYDE---KCDVWSAGVILYILLS 217
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
+H N+V L LI E+ G + + V +G + ++ + I
Sbjct: 72 NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ-------IV 124
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
++Y H+ RI+H D+K N+LLD D KI+DFG + T G + + GA
Sbjct: 125 SAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGAP--- 177
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
Y A E+F + + DV+S G+++ LV
Sbjct: 178 PYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 208
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Query: 213 MPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNIL 272
+ + SL+KF Y K Q + + + +I + I K LE+LH S ++H D+KP N+L
Sbjct: 114 LXDTSLDKF-YKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVL 169
Query: 273 LDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGE--VSHKSDVYS 330
++ K DFG++ V+ + A G Y A E + + S KSD++S
Sbjct: 170 INALGQVKXCDFGISGYLVDD---VAKDIDA-GCKPYXAPERINPELNQKGYSVKSDIWS 225
Query: 331 FGMMIMELVGCKNNLDS 347
G+ +EL + DS
Sbjct: 226 LGITXIELAILRFPYDS 242
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 13/101 (12%)
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAKLCTTKKGIVS 298
I+ + G+ Y+H+ I+H D+KP NILL ++D KI DFGL+ +
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ GT YIA EV + E K DV+S G+++ L+
Sbjct: 183 RI----GTAYYIAPEVLRGTYDE---KCDVWSAGVILYILL 216
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
+ H N++ L L+++ M G L ++ T L ++ +I+ +
Sbjct: 68 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT------LSEKETRKIMRALL 121
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
+ + LH+ I+H D+KP NILLD D K++DFG + C G L GT
Sbjct: 122 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPG--EKLREVCGTP 174
Query: 308 GYIALEV----FSRNFGEVSHKSDVYSFGMMIMELVG 340
Y+A E+ + N + D++S G+++ L+
Sbjct: 175 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 13/97 (13%)
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAKLCTTKKGIVS 298
I+ + G+ Y+H+ I+H D+KP NILL ++D KI DFGL+ C + +
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMK 181
Query: 299 SLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMI 335
+ GT YIA EV + E K DV+S G+++
Sbjct: 182 DRI---GTAYYIAPEVLRGTYDE---KCDVWSAGVIL 212
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 151
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+L+DQ +++DFG AK KG L GT Y+A E
Sbjct: 152 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEYLAPEI 202
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 203 ILSKGYNKA---VDWWALGVLIYEMAA 226
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E+ P G + + G S+P + Y I + EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 158
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+++DQ +++DFGLAK KG L GT Y+A E
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV---KGRTWXLC---GTPEYLAPEI 209
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 210 ILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E+ P G + + G S+P + Y I + EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 158
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+++DQ K++DFG AK KG L GT Y+A E
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC---GTPEYLAPEI 209
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 210 ILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 159
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+L+DQ +++DFG AK KG L GT Y+A E
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEYLAPEI 210
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 211 ILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 159
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+L+DQ +++DFG AK KG L GT Y+A E
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEYLAPEI 210
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 211 ILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 159
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+L+DQ +++DFG AK KG L GT Y+A E
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEYLAPEI 210
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 211 ILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 158
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+L+DQ +++DFG AK KG L GT Y+A E
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEYLAPEI 209
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 210 ILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 188 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
+ H N++ L L+++ M G L ++ T L ++ +I+ +
Sbjct: 81 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT------LSEKETRKIMRALL 134
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
+ + LH+ I+H D+KP NILLD D K++DFG + C G L GT
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPG--EKLREVCGTP 187
Query: 308 GYIALEV----FSRNFGEVSHKSDVYSFGMMIMELVG 340
Y+A E+ + N + D++S G+++ L+
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 158
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+L+DQ +++DFG AK KG L GT Y+A E
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEYLAPEI 209
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 210 ILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H N+V L + A+I E+ G L E+ G S+ ++++
Sbjct: 75 HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLL-------S 127
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCP--KISDFGLAKLCTTKKGIVSSLLGARGT 306
G+ Y H S +I H D+K N LLD P KI DFG +K S++ GT
Sbjct: 128 GVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV----GT 180
Query: 307 IGYIALEVFSRNFGEVSHK-SDVYSFGMMI-MELVGC 341
YIA EV R E K +DV+S G+ + + LVG
Sbjct: 181 PAYIAPEVLLRQ--EYDGKIADVWSCGVTLYVMLVGA 215
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E+ P G + + G S+P + Y I + EYLH
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 159
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+++DQ K++DFG AK KG L GT Y+A E
Sbjct: 160 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC---GTPEYLAPEI 210
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 211 ILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG +L GT Y
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGATWTLC---GTPEY 225
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 226 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 254
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 158
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+L+DQ +++DFG AK KG L GT Y+A E
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEYLAPEI 209
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 210 ILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 159
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+L+DQ +++DFG AK KG L GT Y+A E
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEYLAPEI 210
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 211 ILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 179
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+L+DQ +++DFG AK KG L GT Y+A E
Sbjct: 180 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEYLAPEI 230
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 231 ILSKGYNKA---VDWWALGVLIYEMAA 254
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
+ ++S H +V L + N +IYEFM G L + V + + ++ E
Sbjct: 205 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-----MSEDEAVE 259
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP--KISDFGLAKLCTTKKGIVSS 299
+ + KGL ++H +H D+KP NI+ K+ DFGL K+ + +
Sbjct: 260 YMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT 316
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT + A EV V + +D++S G++
Sbjct: 317 T----GTAEFAAPEVAEGK--PVGYYTDMWSVGVL 345
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 22/150 (14%)
Query: 194 VTLLGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLE 251
+T L F + N N ++ E+ P G + + G +P + Y I + E
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHA-----RFYAAQIVLT--FE 156
Query: 252 YLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIA 311
YLH S +++ D+KP N+++DQ K++DFG AK KG L GT Y+A
Sbjct: 157 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC---GTPEYLA 207
Query: 312 LE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
E + S+ + + D ++ G++I E+
Sbjct: 208 PEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQ---DFCPKISDFGLAKLCTTKKGIV 297
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T +K
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKYDK 177
Query: 298 SSLLGARGTIGYIAL 312
S + + G I YI L
Sbjct: 178 SCDMWSLGVIMYILL 192
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK + ++ GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA------GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 182 LASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYE 241
+ ++S H +V L + N +IYEFM G L + V + + ++ E
Sbjct: 99 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-----MSEDEAVE 153
Query: 242 IVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCP--KISDFGLAKLCTTKKGIVSS 299
+ + KGL ++H +H D+KP NI+ K+ DFGL K+ + +
Sbjct: 154 YMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT 210
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
GT + A EV V + +D++S G++
Sbjct: 211 T----GTAEFAAPEVAEGK--PVGYYTDMWSVGVL 239
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 18/152 (11%)
Query: 194 VTLLGFCLEG-NNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI--AKGL 250
+T L + + NN L+ ++ G L + + P + R+ + E+VI I L
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARF-YLAEMVIAIDSVHQL 194
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
Y+HR DIKP NIL+D + +++DFG + L + G V S + A GT YI
Sbjct: 195 HYVHR---------DIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSV-AVGTPDYI 243
Query: 311 A---LEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ L+ G + D +S G+ + E++
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEML 275
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEF-MPNGSLEKFVYNGDTSKPCQYLRWEKMYE---IVIG 245
H NV+ +C E +R L + N +L+ V + + S + L+ +K Y ++
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSD--ENLKLQKEYNPISLLRQ 141
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILL--------DQDFCPK-----ISDFGL-AKLCT 291
IA G+ +LH S +I+H D+KP NIL+ DQ + ISDFGL KL +
Sbjct: 142 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS-DVYSFG 332
+ +L GT G+ A E+ + +S D++S G
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG 240
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEF-MPNGSLEKFVYNGDTSKPCQYLRWEKMYE---IVIG 245
H NV+ +C E +R L + N +L+ V + + S + L+ +K Y ++
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSD--ENLKLQKEYNPISLLRQ 141
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILL--------DQDFCPK-----ISDFGL-AKLCT 291
IA G+ +LH S +I+H D+KP NIL+ DQ + ISDFGL KL +
Sbjct: 142 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHKS-DVYSFG 332
+ +L GT G+ A E+ + +S D++S G
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG 240
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 30/166 (18%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEF-MPNGSLEKFVYNGDTSKPCQYLRWEKMYE---IVIG 245
H NV+ +C E +R L + N +L+ V + + S + L+ +K Y ++
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSD--ENLKLQKEYNPISLLRQ 123
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILL--------DQDFCPK-----ISDFGL-AKLCT 291
IA G+ +LH S +I+H D+KP NIL+ DQ + ISDFGL KL +
Sbjct: 124 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFG-----EVSHKSDVYSFG 332
+ ++L GT G+ A E+ + ++ D++S G
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 21/141 (14%)
Query: 202 EGNNRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTR 260
+ +N ++ E++P G + + G S+P + Y I + EYLH S
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH---SLD 161
Query: 261 ILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE-VFSRNF 319
+++ D+KP N+L+DQ +++DFG AK KG L GT Y+A E + S+ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEYLAPEIILSKGY 215
Query: 320 GEVSHKSDVYSFGMMIMELVG 340
+ D ++ G++I E+
Sbjct: 216 NKA---VDWWALGVLIYEMAA 233
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDT--SKPCQYLRWEKMYEI 242
++ H +V LLG ++ EF P G+++ + D ++P + +M E
Sbjct: 62 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE- 120
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGL-AKLCTTKKGIVSSLL 301
L +LH S RI+H D+K N+L+ + +++DFG+ AK T + S +
Sbjct: 121 ------ALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI- 170
Query: 302 GARGTIGYIALEVF---SRNFGEVSHKSDVYSFGMMIMELV 339
GT ++A EV + +K+D++S G+ ++E+
Sbjct: 171 ---GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 208
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 21/141 (14%)
Query: 202 EGNNRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTR 260
+ +N ++ E++P G + + G S+P + Y I + EYLH S
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH---SLD 161
Query: 261 ILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE-VFSRNF 319
+++ D+KP N+L+DQ +++DFG AK KG L GT Y+A E + S+ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEYLAPEIILSKGY 215
Query: 320 GEVSHKSDVYSFGMMIMELVG 340
+ D ++ G++I E+
Sbjct: 216 NKA---VDWWALGVLIYEMAA 233
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I L+YLH +++ D+K N++LD+D KI+DFGL K + + G
Sbjct: 260 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC---G 314
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y+A EV N + D + G+++ E++
Sbjct: 315 TPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 346
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I L+YLH +++ D+K N++LD+D KI+DFGL K + + G
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC---G 311
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y+A EV N + D + G+++ E++
Sbjct: 312 TPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 343
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 21/141 (14%)
Query: 202 EGNNRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTR 260
+ +N ++ E++P G + + G S+P + Y I + EYLH S
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH---SLD 161
Query: 261 ILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE-VFSRNF 319
+++ D+KP N+L+DQ +++DFG AK KG L GT Y+A E + S+ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEYLAPEIILSKGY 215
Query: 320 GEVSHKSDVYSFGMMIMELVG 340
+ D ++ G++I E+
Sbjct: 216 NKA---VDWWALGVLIYEMAA 233
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLX---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+++DQ K++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDT--SKPCQYLRWEKMYEIVIGIA 247
H +V LLG ++ EF P G+++ + D ++P + +M E
Sbjct: 75 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE------ 128
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGL-AKLCTTKKGIVSSLLGARGT 306
L +LH S RI+H D+K N+L+ + +++DFG+ AK T + S + GT
Sbjct: 129 -ALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI----GT 180
Query: 307 IGYIALEVF---SRNFGEVSHKSDVYSFGMMIMELV 339
++A EV + +K+D++S G+ ++E+
Sbjct: 181 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 216
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 25/139 (17%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIV 243
+ + +H ++ + F + + ++ E M G L +K V N + L + Y+++
Sbjct: 69 LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQML 124
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAK----------LC 290
+ + +YLH I+H D+KP N+LL ++D KI+DFG +K LC
Sbjct: 125 LAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 291 TTKKGIVSSLLGARGTIGY 309
T + +L + GT GY
Sbjct: 178 GTPTYLAPEVLVSVGTAGY 196
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 25/139 (17%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIV 243
+ + +H ++ + F + + ++ E M G L +K V N + L + Y+++
Sbjct: 69 LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQML 124
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAK----------LC 290
+ + +YLH I+H D+KP N+LL ++D KI+DFG +K LC
Sbjct: 125 LAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 291 TTKKGIVSSLLGARGTIGY 309
T + +L + GT GY
Sbjct: 178 GTPTYLAPEVLVSVGTAGY 196
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 25/139 (17%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIV 243
+ + +H ++ + F + + ++ E M G L +K V N + L + Y+++
Sbjct: 69 LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQML 124
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAK----------LC 290
+ + +YLH I+H D+KP N+LL ++D KI+DFG +K LC
Sbjct: 125 LAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 291 TTKKGIVSSLLGARGTIGY 309
T + +L + GT GY
Sbjct: 178 GTPTYLAPEVLVSVGTAGY 196
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 25/139 (17%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIV 243
+ + +H ++ + F + + ++ E M G L +K V N + L + Y+++
Sbjct: 75 LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQML 130
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAK----------LC 290
+ + +YLH I+H D+KP N+LL ++D KI+DFG +K LC
Sbjct: 131 LAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 183
Query: 291 TTKKGIVSSLLGARGTIGY 309
T + +L + GT GY
Sbjct: 184 GTPTYLAPEVLVSVGTAGY 202
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 25/139 (17%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIV 243
+ + +H ++ + F + + ++ E M G L +K V N + L + Y+++
Sbjct: 68 LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQML 123
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAK----------LC 290
+ + +YLH I+H D+KP N+LL ++D KI+DFG +K LC
Sbjct: 124 LAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 176
Query: 291 TTKKGIVSSLLGARGTIGY 309
T + +L + GT GY
Sbjct: 177 GTPTYLAPEVLVSVGTAGY 195
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 24/160 (15%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-----EKFVYNGDTSKPCQYLRWEKM 239
+ H +V L+ G LI E++ G L + ++ DT+ C YL
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTA--CFYL----- 127
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
I+ L +LH+ I++ D+KP NI+L+ K++DFGL K + +
Sbjct: 128 ----AEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT 180
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
GTI Y+A E+ R+ + D +S G ++ +++
Sbjct: 181 FC---GTIEYMAPEILMRSGH--NRAVDWWSLGALMYDML 215
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 180 DGLASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
+ + +S+ SH ++V G C+ G+ L+ EF+ GSL+ ++ +K C + W+
Sbjct: 61 EAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL---KKNKNCINILWK-- 115
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
E+ +A + +L ++H ++ NILL ++ K + KL + GI +
Sbjct: 116 LEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL--SDPGISIT 170
Query: 300 LLGA---RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
+L + I ++ E N ++ +D +SFG + E+ + S +D+ ++
Sbjct: 171 VLPKDILQERIPWVPPECIE-NPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ 229
Query: 357 F 357
F
Sbjct: 230 F 230
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H N+V L + A++ E+ G L E+ G S+ ++++
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------S 126
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCP--KISDFGLAKLCTTKKGIVSSLLGARGT 306
G+ Y H + ++ H D+K N LLD P KI+DFG +K + S A GT
Sbjct: 127 GVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASV----LHSQPKSAVGT 179
Query: 307 IGYIALEVFSRNF--GEVSHKSDVYSFGMMI-MELVGC 341
YIA EV + G+V +DV+S G+ + + LVG
Sbjct: 180 PAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVGA 214
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
+H N+V L LI E+ G + + V +G + ++ + I
Sbjct: 69 NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ-------IV 121
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
++Y H+ RI+H D+K N+LLD D KI+DFG + T + L G+
Sbjct: 122 SAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFT----VGGKLDTFCGSP 174
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
Y A E+F + + DV+S G+++ LV
Sbjct: 175 PYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 205
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 197 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 254
L F + N N ++ E+ P G + + G S+P + Y I + EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 158
Query: 255 RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALE- 313
S +++ D+KP N+++DQ +++DFG AK KG L GT Y+A E
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEYLAPEI 209
Query: 314 VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+ S+ + + D ++ G++I E+
Sbjct: 210 ILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 200 CLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY-EIVIGIAKGLEYLHRGCS 258
C E N A+ NGS+ F + D +++ EK+ I+ I L YLH +
Sbjct: 142 CPECNEEAI------NGSIHGFRESLD------FVQREKLISNIMRQIFSALHYLH---N 186
Query: 259 TRILHFDIKPHNILL--DQDFCPKISDFGLAK-LCTTKKGIVSSLLGARGTIGYIALEVF 315
I H DIKP N L ++ F K+ DFGL+K G + GT ++A EV
Sbjct: 187 QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL 246
Query: 316 SRNFGEVSHKSDVYSFGMMIMELV 339
+ K D +S G+++ L+
Sbjct: 247 NTTNESYGPKCDAWSAGVLLHLLL 270
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 205
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 206 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L + + LI E+ P G L K + K C + ++ I+ +A
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYK-----ELQKSCTFDE-QRTATIMEELADA 135
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
L Y H +++H DIKP N+LL KI+DFG + + + GT+ Y
Sbjct: 136 LMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC-----GTLDY 187
Query: 310 IALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSS 353
+ E+ + K D++ G++ EL+ +S N +
Sbjct: 188 LPPEMIEGRMH--NEKVDLWCIGVLCYELLVGNPPFESASHNET 229
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 233 YLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
+L E + I+ + G ++H I+H D+KP N LL+QD K+ DFGLA+ +
Sbjct: 125 FLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181
Query: 293 KK--GIVSSL 300
+K IV+ L
Sbjct: 182 EKDTNIVNDL 191
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 205
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 206 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 225
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 226 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 254
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 233 YLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTT 292
+L + + I+ + G +++H + I+H D+KP N LL+QD KI DFGLA+ +
Sbjct: 127 FLTEQHVKTILYNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINS 183
Query: 293 KKGI 296
K I
Sbjct: 184 DKDI 187
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 149 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 199
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 200 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 228
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 24/160 (15%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-----EKFVYNGDTSKPCQYLRWEKM 239
+ H +V L+ G LI E++ G L + ++ DT+ C YL
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTA--CFYL----- 127
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
I+ L +LH+ I++ D+KP NI+L+ K++DFGL K + G V+
Sbjct: 128 ----AEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTH 179
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
GTI Y+A E+ R+ + D +S G ++ +++
Sbjct: 180 XFC--GTIEYMAPEILMRSGH--NRAVDWWSLGALMYDML 215
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 147 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 197
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 198 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 226
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 25/139 (17%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIV 243
+ + +H ++ + F + + ++ E M G L +K V N + L + Y+++
Sbjct: 194 LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQML 249
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAK----------LC 290
+ + +YLH I+H D+KP N+LL ++D KI+DFG +K LC
Sbjct: 250 LAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 302
Query: 291 TTKKGIVSSLLGARGTIGY 309
T + +L + GT GY
Sbjct: 303 GTPTYLAPEVLVSVGTAGY 321
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 25/139 (17%)
Query: 185 ISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIV 243
+ + +H ++ + F + + ++ E M G L +K V N + L + Y+++
Sbjct: 208 LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQML 263
Query: 244 IGIAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAK----------LC 290
+ + +YLH I+H D+KP N+LL ++D KI+DFG +K LC
Sbjct: 264 LAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 316
Query: 291 TTKKGIVSSLLGARGTIGY 309
T + +L + GT GY
Sbjct: 317 GTPTYLAPEVLVSVGTAGY 335
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I L+YLH +++ D+K N++LD+D KI+DFGL K + G
Sbjct: 119 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC---G 173
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y+A EV N + D + G+++ E++
Sbjct: 174 TPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 205
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 13/150 (8%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L G L + ++ E P GSL + K + + + +A+G
Sbjct: 74 HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL-----RKHQGHFLLGTLSRYAVQVAEG 127
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
+ YL S R +H D+ N+LL KI DFGL + + +
Sbjct: 128 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 310 IALEVF-SRNFGEVSHKSDVYSFGMMIMEL 338
A E +R F SH SD + FG+ + E+
Sbjct: 185 CAPESLKTRTF---SHASDTWMFGVTLWEM 211
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 26/216 (12%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L G L + ++ E P GSL + K + + + +A+G
Sbjct: 70 HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL-----RKHQGHFLLGTLSRYAVQVAEG 123
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
+ YL S R +H D+ N+LL KI DFGL + + +
Sbjct: 124 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 180
Query: 310 IALEVF-SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQD 368
A E +R F SH SD + FG+ + E+ G++ S ++ + D
Sbjct: 181 CAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH---------KID 228
Query: 369 REFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRP 404
+E G + + + + V + C +P DRP
Sbjct: 229 KE----GERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 180 DGLASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 239
+ + +S+ SH ++V G C G+ L+ EF+ GSL+ ++ +K C + W+
Sbjct: 61 EAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYL---KKNKNCINILWK-- 115
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSS 299
E+ +A + +L ++H ++ NILL ++ K + KL + GI +
Sbjct: 116 LEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL--SDPGISIT 170
Query: 300 LLGA---RGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVY 356
+L + I ++ E N ++ +D +SFG + E+ + S +D+ ++
Sbjct: 171 VLPKDILQERIPWVPPECIE-NPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ 229
Query: 357 F 357
F
Sbjct: 230 F 230
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 26/216 (12%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L G L + ++ E P GSL + K + + + +A+G
Sbjct: 70 HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL-----RKHQGHFLLGTLSRYAVQVAEG 123
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
+ YL S R +H D+ N+LL KI DFGL + + +
Sbjct: 124 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 310 IALEVF-SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQD 368
A E +R F SH SD + FG+ + E+ G++ S ++ + D
Sbjct: 181 CAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH---------KID 228
Query: 369 REFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRP 404
+E G + + + + V + C +P DRP
Sbjct: 229 KE----GERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 8/52 (15%)
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLD-QDFCPKISDFGLAKL 289
MY+++ +GL+Y+H S +LH D+KP N+ ++ +D KI DFGLA++
Sbjct: 126 MYQLL----RGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 13/150 (8%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L G L + ++ E P GSL + K + + + +A+G
Sbjct: 80 HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL-----RKHQGHFLLGTLSRYAVQVAEG 133
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
+ YL S R +H D+ N+LL KI DFGL + + +
Sbjct: 134 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 190
Query: 310 IALEVF-SRNFGEVSHKSDVYSFGMMIMEL 338
A E +R F SH SD + FG+ + E+
Sbjct: 191 CAPESLKTRTF---SHASDTWMFGVTLWEM 217
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 187 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 246
+T H NVV +G C+ + A+I +L V + L K +I I
Sbjct: 85 QTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI-----VLDVNKTRQIAQEI 139
Query: 247 AKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGL 286
KG+ YLH + ILH D+K N+ D I+DFGL
Sbjct: 140 VKGMGYLH---AKGILHKDLKSKNVFYDNGKVV-ITDFGL 175
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I L+YLH +++ D+K N++LD+D KI+DFGL K + G
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC---G 172
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y+A EV N + D + G+++ E++
Sbjct: 173 TPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 204
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 26/216 (12%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L G L + ++ E P GSL + K + + + +A+G
Sbjct: 80 HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL-----RKHQGHFLLGTLSRYAVQVAEG 133
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
+ YL S R +H D+ N+LL KI DFGL + + +
Sbjct: 134 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 190
Query: 310 IALEVF-SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQD 368
A E +R F SH SD + FG+ + E+ G++ S ++ + D
Sbjct: 191 CAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH---------KID 238
Query: 369 REFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRP 404
+E G + + + + V + C +P DRP
Sbjct: 239 KE----GERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
I L+YLH +++ D+K N++LD+D KI+DFGL K + G
Sbjct: 117 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC---G 171
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y+A EV N + D + G+++ E++
Sbjct: 172 TPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 203
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 30/166 (18%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEF-MPNGSLEKFVYNGDTSKPCQYLRWEKMYE---IVIG 245
H NV+ +C E +R L + N +L+ V + + S + L+ +K Y ++
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSD--ENLKLQKEYNPISLLRQ 123
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILL--------DQDFCPK-----ISDFGL-AKLCT 291
IA G+ +LH S +I+H D+KP NIL+ DQ + ISDFGL KL +
Sbjct: 124 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 292 TKKGIVSSLLGARGTIGYIALEVFSRNFG-----EVSHKSDVYSFG 332
+ +L GT G+ A E+ + ++ D++S G
Sbjct: 181 GQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 7/50 (14%)
Query: 239 MYEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK 288
+Y +++G+ +Y+H S ILH D+KP N L++QD K+ DFGLA+
Sbjct: 162 LYNLLVGV----KYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKG 295
GL Y+HR +ILH D+K N+L+ +D K++DFGLA+ + K
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 26/216 (12%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L G L + ++ E P GSL + K + + + +A+G
Sbjct: 70 HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL-----RKHQGHFLLGTLSRYAVQVAEG 123
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
+ YL S R +H D+ N+LL KI DFGL + + +
Sbjct: 124 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 310 IALEVF-SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQD 368
A E +R F SH SD + FG+ + E+ G++ S ++ + D
Sbjct: 181 CAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH---------KID 228
Query: 369 REFKLLGVVTKKENEIAKKMIIVGLWCIQARPYDRP 404
+E G + + + + V + C +P DRP
Sbjct: 229 KE----GERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 13/150 (8%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H N++ L G L + ++ E P GSL + K + + + +A+G
Sbjct: 74 HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL-----RKHQGHFLLGTLSRYAVQVAEG 127
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
+ YL S R +H D+ N+LL KI DFGL + + +
Sbjct: 128 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 310 IALEVF-SRNFGEVSHKSDVYSFGMMIMEL 338
A E +R F SH SD + FG+ + E+
Sbjct: 185 CAPESLKTRTF---SHASDTWMFGVTLWEM 211
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKG 295
GL Y+HR +ILH D+K N+L+ +D K++DFGLA+ + K
Sbjct: 137 GLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKG 295
GL Y+HR +ILH D+K N+L+ +D K++DFGLA+ + K
Sbjct: 137 GLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKG 295
GL Y+HR +ILH D+K N+L+ +D K++DFGLA+ + K
Sbjct: 136 GLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 179
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
IA L YLH S I++ D+KP NILLD ++DFGL K S+ G
Sbjct: 148 IASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC---G 201
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
T Y+A EV + D + G ++ E++
Sbjct: 202 TPEYLAPEVLHKQ--PYDRTVDWWCLGAVLYEML 233
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQ---DFCPKISDFGLAKLCTTKKGIV 297
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 183
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGC 341
+ T Y+A EV + S D++S G +IM ++ C
Sbjct: 184 TPCY----TPYYVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 220
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQ---DFCPKISDFGLAKLCTTKKGIV 297
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 182
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGC 341
+ T Y+A EV + S D++S G +IM ++ C
Sbjct: 183 TPCY----TPYYVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 219
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQ---DFCPKISDFGLAKLCTTKKGIV 297
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 181
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGC 341
+ T Y+A EV + S D++S G +IM ++ C
Sbjct: 182 TPCY----TPYYVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 218
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+++DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIIISKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I ++
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYQMAA 233
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQ---DFCPKISDFGLAKLCTTKKGIV 297
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 135 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 191
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGC 341
+ T Y+A EV + D++S G +IM ++ C
Sbjct: 192 TPCY----TPYYVAPEVLGPE--KYDKSCDMWSLG-VIMYILLC 228
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
++ + I K L YL ++H D+KP NILLD+ K+ DFG++ K S
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 301 LGARGTIGYIALEVF---SRNFGEVSHKSDVYSFGMMIMELV 339
G Y+A E + ++DV+S G+ ++EL
Sbjct: 186 ----GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA 223
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQ---DFCPKISDFGLAKLCTTKKGIV 297
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 177
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGC 341
+ T Y+A EV + S D++S G +IM ++ C
Sbjct: 178 TPCY----TPYYVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 214
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQ---DFCPKISDFGLAKLCTTKKGIV 297
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 175
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGC 341
+ T Y+A EV + S D++S G +IM ++ C
Sbjct: 176 TPCY----TPYYVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 212
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 192 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
N++TL + +R AL++E + N ++ + T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LRQTLTDYDIRFY----MYEIL----KA 143
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCP-KISDFGLAKLCTTKKGIVSSLLGARGTIG 308
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + R
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASR 195
Query: 309 YIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
Y ++ + D++S G M+ ++ K G DN ++
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQ---DFCPKISDFGLAKLCTTKKGIV 297
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 176
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGC 341
+ T Y+A EV + S D++S G +IM ++ C
Sbjct: 177 TPCY----TPYYVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 213
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQ---DFCPKISDFGLAKLCTTKKGIV 297
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 177
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGC 341
+ T Y+A EV + S D++S G +IM ++ C
Sbjct: 178 TPCY----TPYYVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 214
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQ---DFCPKISDFGLAKLCTTKKGIV 297
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 171 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 227
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGC 341
+ T Y+A EV + S D++S G +IM ++ C
Sbjct: 228 TPCY----TPYYVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 264
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK 288
++ + G+ Y H R+LH D+KP N+L++++ KI+DFGLA+
Sbjct: 106 LLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK 288
++ + G+ Y H R+LH D+KP N+L++++ KI+DFGLA+
Sbjct: 106 LLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK 288
++ + G+ Y H R+LH D+KP N+L++++ KI+DFGLA+
Sbjct: 106 LLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQ---DFCPKISDFGLAKLCTTKKGIV 297
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 165 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 221
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGC 341
+ T Y+A EV + S D++S G +IM ++ C
Sbjct: 222 TPCY----TPYYVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 258
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 18/150 (12%)
Query: 207 ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDI 266
AL++E++ N ++ +Y T ++ MYE++ K L+Y H S I+H D+
Sbjct: 116 ALVFEYINNTDFKQ-LYQILTDFDIRFY----MYELL----KALDYCH---SKGIMHRDV 163
Query: 267 KPHNILLD-QDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHK 325
KPHN+++D Q ++ D+GLA+ + R Y ++ +
Sbjct: 164 KPHNVMIDHQQKKLRLIDWGLAEFYHP-----AQEYNVRVASRYFKGPELLVDYQMYDYS 218
Query: 326 SDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
D++S G M+ ++ + G DN ++
Sbjct: 219 LDMWSLGCMLASMIFRREPFFHGQDNYDQL 248
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 18/150 (12%)
Query: 207 ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDI 266
AL++E++ N ++ +Y T ++ MYE++ K L+Y H S I+H D+
Sbjct: 111 ALVFEYINNTDFKQ-LYQILTDFDIRFY----MYELL----KALDYCH---SKGIMHRDV 158
Query: 267 KPHNILLD-QDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVSHK 325
KPHN+++D Q ++ D+GLA+ + R Y ++ +
Sbjct: 159 KPHNVMIDHQQKKLRLIDWGLAEFYHP-----AQEYNVRVASRYFKGPELLVDYQMYDYS 213
Query: 326 SDVYSFGMMIMELVGCKNNLDSGVDNSSEV 355
D++S G M+ ++ + G DN ++
Sbjct: 214 LDMWSLGCMLASMIFRREPFFHGQDNYDQL 243
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 237 EKMYEIVIGIAKGLEYLHR---GCSTR--ILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
E M ++ + A GL +LH G + I H D+K NIL+ ++ I+D GLA
Sbjct: 139 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 198
Query: 292 TKKGIVSSLLGAR-GTIGYIALEVFSRNFG----EVSHKSDVYSFGMMIMELV 339
+ + R GT Y+A EV + E ++D+Y+ G++ E+
Sbjct: 199 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQ---DFCPKISDFGLAKLCTTKKGIV 297
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH---- 171
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGC 341
+SL T Y+A EV + S D++S G +IM ++ C
Sbjct: 172 NSLTEPCYTPYYVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 212
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+D+ +++DFG AK KG L GT Y
Sbjct: 141 FEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 191
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A E + S+ + + D ++ G++I E+
Sbjct: 192 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 220
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAK--------LCTTKKGIVSSLL 301
EYLH S +++ D+KP N+L+DQ +++DFG AK LC T + + ++
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEII 210
Query: 302 GARG 305
++G
Sbjct: 211 LSKG 214
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 237 EKMYEIVIGIAKGLEYLHR---GCSTR--ILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
E M ++ + A GL +LH G + I H D+K NIL+ ++ I+D GLA
Sbjct: 126 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 185
Query: 292 TKKGIVSSLLGAR-GTIGYIALEVFSRNFG----EVSHKSDVYSFGMMIMELV 339
+ + R GT Y+A EV + E ++D+Y+ G++ E+
Sbjct: 186 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 237 EKMYEIVIGIAKGLEYLHR---GCSTR--ILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
E M ++ + A GL +LH G + I H D+K NIL+ ++ I+D GLA
Sbjct: 101 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 160
Query: 292 TKKGIVSSLLGAR-GTIGYIALEVFSRNFG----EVSHKSDVYSFGMMIMELV 339
+ + R GT Y+A EV + E ++D+Y+ G++ E+
Sbjct: 161 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 237 EKMYEIVIGIAKGLEYLHR---GCSTR--ILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
E M ++ + A GL +LH G + I H D+K NIL+ ++ I+D GLA
Sbjct: 100 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159
Query: 292 TKKGIVSSLLGAR-GTIGYIALEVFSRNFG----EVSHKSDVYSFGMMIMELV 339
+ + R GT Y+A EV + E ++D+Y+ G++ E+
Sbjct: 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 241 EIVIGIAKGLEYLH-----RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKG 295
IV+ IA GL +LH I H D+K NIL+ ++ I+D GLA + +
Sbjct: 109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 168
Query: 296 IVSSLLGAR-GTIGYIALEVFSRNFG----EVSHKSDVYSFGMMIMELV 339
+ R GT Y+A EV + + D+++FG+++ E+
Sbjct: 169 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 237 EKMYEIVIGIAKGLEYLHR---GCSTR--ILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
E M ++ + A GL +LH G + I H D+K NIL+ ++ I+D GLA
Sbjct: 103 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 162
Query: 292 TKKGIVSSLLGAR-GTIGYIALEVFSRNFG----EVSHKSDVYSFGMMIMELV 339
+ + R GT Y+A EV + E ++D+Y+ G++ E+
Sbjct: 163 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 237 EKMYEIVIGIAKGLEYLHR---GCSTR--ILHFDIKPHNILLDQDFCPKISDFGLAKLCT 291
E M ++ + A GL +LH G + I H D+K NIL+ ++ I+D GLA
Sbjct: 106 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 165
Query: 292 TKKGIVSSLLGAR-GTIGYIALEVFSRNFG----EVSHKSDVYSFGMMIMELV 339
+ + R GT Y+A EV + E ++D+Y+ G++ E+
Sbjct: 166 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 241 EIVIGIAKGLEYLH-----RGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKG 295
IV+ IA GL +LH I H D+K NIL+ ++ I+D GLA + +
Sbjct: 109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 168
Query: 296 IVSSLLGAR-GTIGYIALEVFSRNFG----EVSHKSDVYSFGMMIMELV 339
+ R GT Y+A EV + + D+++FG+++ E+
Sbjct: 169 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 187 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIG 245
R SH N++ L +L+ E + G L ++ V G Y + V
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG-------YYSERDAADAVKQ 156
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQ---DFCPKISDFGLAKLCTTKKGIVSSLLG 302
I + + YLH I+H D+KP N+L D KI+DFGL+K+ + + +
Sbjct: 157 ILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVC-- 211
Query: 303 ARGTIGYIALEVF 315
GT GY A E+
Sbjct: 212 --GTPGYCAPEIL 222
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 20/138 (14%)
Query: 208 LIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDI 266
+I E M G L + GD Q + EI+ I +++LH S I H D+
Sbjct: 84 IIMECMEGGELFSRIQERGD-----QAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDV 135
Query: 267 KPHNILL---DQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVS 323
KP N+L ++D K++DFG AK T ++L T Y+A EV + S
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAKETTQ-----NALQTPCYTPYYVAPEVLGPEKYDKS 190
Query: 324 HKSDVYSFGMMIMELVGC 341
D++S G +IM ++ C
Sbjct: 191 --CDMWSLG-VIMYILLC 205
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 241 EIVIGIAKGLEYLH---RGCSTR--ILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKG 295
IV+ IA GL +LH G + I H D+K NIL+ ++ I+D GLA + +
Sbjct: 138 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 197
Query: 296 IVSSLLGAR-GTIGYIALEVFSRNFG----EVSHKSDVYSFGMMIMELV 339
+ R GT Y+A EV + + D+++FG+++ E+
Sbjct: 198 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 246
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Query: 194 VTLLGFCLEGNNRA-LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI--AKGL 250
+T L F + N L+ E+ G L + P + R+ + EIV+ I L
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARF-YLAEIVMAIDSVHRL 181
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
Y+HR DIKP NILLD+ +++DFG + L G V SL+ A GT Y+
Sbjct: 182 GYVHR---------DIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRSLV-AVGTPDYL 230
Query: 311 ALEVFS 316
+ E+
Sbjct: 231 SPEILQ 236
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 20/138 (14%)
Query: 208 LIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHRGCSTRILHFDI 266
+I E M G L + GD Q + EI+ I +++LH S I H D+
Sbjct: 103 IIMECMEGGELFSRIQERGD-----QAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDV 154
Query: 267 KPHNILL---DQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSRNFGEVS 323
KP N+L ++D K++DFG AK T ++L T Y+A EV +
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAKETTQ-----NALQTPCYTPYYVAPEVLGPE--KYD 207
Query: 324 HKSDVYSFGMMIMELVGC 341
D++S G +IM ++ C
Sbjct: 208 KSCDMWSLG-VIMYILLC 224
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 190 HVNVVTLLGFCLEGNNR----ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG 245
H N++ + ++G LI ++ NGSL ++ + L + M ++
Sbjct: 90 HENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-------LDAKSMLKLAYS 142
Query: 246 IAKGLEYLHRGC-STR----ILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
GL +LH ST+ I H D+K NIL+ ++ I+D GLA + V
Sbjct: 143 SVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIP 202
Query: 301 LGAR-GTIGYIALEV----FSRNFGEVSHKSDVYSFGMMIMELV 339
R GT Y+ EV +RN + +D+YSFG+++ E+
Sbjct: 203 PNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 20/160 (12%)
Query: 189 SHVNVVTLLGF----CLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
H N++T+ E N I + + L + + Q L + + +
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-------STQMLSDDHIQYFIY 119
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
+ ++ LH + ++H D+KP N+L++ + K+ DFGLA++ S G +
Sbjct: 120 QTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 305 -GTIGYIALEVFSR-----NFGEVSHKSDVYSFGMMIMEL 338
G Y+A + + S DV+S G ++ EL
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 22/161 (13%)
Query: 189 SHVNVVTLLGF----CLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
H N++T+ E N I + + L + + Q L + + +
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-------STQMLSDDHIQYFIY 119
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC-------TTKKGIV 297
+ ++ LH + ++H D+KP N+L++ + K+ DFGLA++ + G
Sbjct: 120 QTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
S ++ T Y A EV + + S DV+S G ++ EL
Sbjct: 177 SGMVEFVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGY 309
EYLH S +++ D+KP N+L+DQ +++DFG AK KG L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC---GTPEY 204
Query: 310 IALE-VFSRNFGEVSHKSDVYSFGMMIMELVG 340
+A + S+ + + D ++ G++I E+
Sbjct: 205 LAPAIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 22/161 (13%)
Query: 189 SHVNVVTLLGF----CLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 244
H N++T+ E N I + + L + + Q L + + +
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-------STQMLSDDHIQYFIY 119
Query: 245 GIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLC-------TTKKGIV 297
+ ++ LH + ++H D+KP N+L++ + K+ DFGLA++ + G
Sbjct: 120 QTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMEL 338
S + T Y A EV + + S DV+S G ++ EL
Sbjct: 177 SGMTEXVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 34/167 (20%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSL---------EKFVYNGDTSKPCQYLRWEKM 239
H ++V LL +++EFM L FVY+ + Y+R
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA--SHYMRQ--- 138
Query: 240 YEIVIGIAKGLEYLHRGCSTRILHFDIKPHNILL--DQDFCP-KISDFGLAKLCTTKKGI 296
I + L Y H I+H D+KP N+LL ++ P K+ DFG+A + + G+
Sbjct: 139 ------ILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGL 188
Query: 297 VSSLLGARGTIGYIALEVFSRN-FGEVSHKSDVYSFGMMIMELV-GC 341
V+ G GT ++A EV R +G+ DV+ G+++ L+ GC
Sbjct: 189 VAG--GRVGTPHFMAPEVVKREPYGK---PVDVWGCGVILFILLSGC 230
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 190 HVNVVTLLGFCLEGNNRA----LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG 245
H N++ + + N + LI + +GSL F+ T +P LR + +
Sbjct: 61 HDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQR-QTLEPHLALR------LAVS 113
Query: 246 IAKGLEYLHR---GCSTR--ILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSL 300
A GL +LH G + I H D K N+L+ + I+D GLA + + +
Sbjct: 114 AACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIG 173
Query: 301 LGAR-GTIGYIALEVFSRNFG----EVSHKSDVYSFGMMIMELV 339
R GT Y+A EV E +D+++FG+++ E+
Sbjct: 174 NNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
+H N+V L L+ E+ G + + V +G + ++ + I
Sbjct: 72 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------IV 124
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
++Y H+ I+H D+K N+LLD D KI+DFG + T + + L G+
Sbjct: 125 SAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFT----VGNKLDTFCGSP 177
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
Y A E+F + + DV+S G+++ LV
Sbjct: 178 PYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 208
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 26/180 (14%)
Query: 188 TSHVNVVTLLGFCLEGNNRA------LIYEFMPNGSLEKFVYNGDTSKPCQYLRWE-KMY 240
H NVV L F ++ L+ E++P + + L + MY
Sbjct: 89 VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMY 148
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLD-QDFCPKISDFGLAKLCTTKKGIVSS 299
+++ + L Y+H S I H DIKP N+LLD K+ DFG AK+ + VS
Sbjct: 149 QLL----RSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX 201
Query: 300 LLGARGTIGYIALEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDNSSEV 355
+ Y A E+ FG ++ + D++S G ++ EL+ + +SG+D E+
Sbjct: 202 ICSRY----YRAPELI---FGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEI 254
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 194 VTLLGFCLEGNNRA-LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK--GL 250
+T L + + N L+ ++ G L + + P R+ + E+V+ I L
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF-YIGEMVLAIDSIHQL 194
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
Y+HR DIKP N+LLD + +++DFG + L G V S + A GT YI
Sbjct: 195 HYVHR---------DIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSV-AVGTPDYI 243
Query: 311 A---LEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ L+ G+ + D +S G+ + E++
Sbjct: 244 SPEILQAMEDGMGKYGPECDWWSLGVCMYEML 275
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 194 VTLLGFCLEGNNRA-LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK--GL 250
+T L + + N L+ ++ G L + + P R+ + E+V+ I L
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF-YIGEMVLAIDSIHQL 210
Query: 251 EYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYI 310
Y+HR DIKP N+LLD + +++DFG + L G V S + A GT YI
Sbjct: 211 HYVHR---------DIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSV-AVGTPDYI 259
Query: 311 A---LEVFSRNFGEVSHKSDVYSFGMMIMELV 339
+ L+ G+ + D +S G+ + E++
Sbjct: 260 SPEILQAMEDGMGKYGPECDWWSLGVCMYEML 291
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H N+V L + A++ E+ G L E+ G S+ ++++
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------S 126
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCP--KISDFGLAKLCTTKKGIVSSLLGARGT 306
G+ Y H + ++ H D+K N LLD P KI DFG +K S++ GT
Sbjct: 127 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV----GT 179
Query: 307 IGYIALEVFSRNF--GEVSHKSDVYSFGMMI-MELVGC 341
YIA EV + G+V +DV+S G+ + + LVG
Sbjct: 180 PAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVGA 214
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 248
H N+V L + A++ E+ G L E+ G S+ ++++
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------S 125
Query: 249 GLEYLHRGCSTRILHFDIKPHNILLDQDFCP--KISDFGLAKLCTTKKGIVSSLLGARGT 306
G+ Y H + ++ H D+K N LLD P KI DFG +K S++ GT
Sbjct: 126 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV----GT 178
Query: 307 IGYIALEVFSRNF--GEVSHKSDVYSFGMMI-MELVGC 341
YIA EV + G+V +DV+S G+ + + LVG
Sbjct: 179 PAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVGA 213
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 249
H NV+ L+ F E + L++E M GS+ ++ ++ + +V +A
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR------RHFNELEASVVVQDVASA 123
Query: 250 LEYLHRGCSTRILHFDIKPHNILLDQ--DFCP-KISDFGLA---KLCTTKKGIVS-SLLG 302
L++LH + I H D+KP NIL + P KI DFGL KL I + LL
Sbjct: 124 LDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLT 180
Query: 303 ARGTIGYIA---LEVFSRNFGEVSHKSDVYSFGMMIMELV 339
G+ Y+A +E FS + D++S G+++ L+
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 192 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 251
N++ L+ F + L++E + GS+ + + ++ + +V +A L+
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHI------QKQKHFNEREASRVVRDVAAALD 125
Query: 252 YLHRGCSTRILHFDIKPHNILLD--QDFCP-KISDFGLA---KLCTTKKGIVS-SLLGAR 304
+LH + I H D+KP NIL + + P KI DF L KL + I + L
Sbjct: 126 FLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 305 GTIGYIA---LEVFSRNFGEVSHKSDVYSFGMMI 335
G+ Y+A +EVF+ + D++S G+++
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVL 216
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 200 CLEGNNRAL-IYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLH-RGC 257
C + +R + E++ G L F P ++ R+ Y I +A L YLH RG
Sbjct: 121 CFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARF---YSAEISLA--LNYLHERG- 173
Query: 258 STRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVF-S 316
I++ D+K N+LLD + K++D+G+ K S+ GT YIA E+
Sbjct: 174 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC---GTPNYIAPEILRG 227
Query: 317 RNFGEVSHKSDVYSFGMMIMELVGCKNNLD 346
++G D ++ G+++ E++ ++ D
Sbjct: 228 EDYG---FSVDWWALGVLMFEMMAGRSPFD 254
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILL 273
+I+ + +GL+YLH C RI+H DIKP NILL
Sbjct: 150 KIIQQVLQGLDYLHTKC--RIIHTDIKPENILL 180
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQ---DFCPKISDFGLAKLCTTKKGIV 297
EI I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 165 EIXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 221
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMM 334
+ T Y+A EV + S D +S G++
Sbjct: 222 TPCY----TPYYVAPEVLGPEKYDKS--CDXWSLGVI 252
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILL 273
+I+ + +GL+YLH C RI+H DIKP NILL
Sbjct: 134 KIIQQVLQGLDYLHTKC--RIIHTDIKPENILL 164
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 190 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEK--MYEIVIGIA 247
H N++ L + LI+E+ N + N D S +R K +Y+++
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVS-----MRVIKSFLYQLI---- 142
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILL---DQDFCP--KISDFGLAK 288
G+ + H S R LH D+KP N+LL D P KI DFGLA+
Sbjct: 143 NGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNG---DTSKPCQYLRWEKMYEI 242
S H N++ + + + L+ EF P G L K + D + ++
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------- 121
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFG 285
+A L Y H +++H DIKP N+L+ KI+DFG
Sbjct: 122 --ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
+H N+V L L+ E+ G + + V +G + ++ + I
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------IV 123
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
++Y H+ I+H D+K N+LLD D KI+DFG + T + L G
Sbjct: 124 SAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT----FGNKLDAFCGAP 176
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
Y A E+F + + DV+S G+++ LV
Sbjct: 177 PYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 207
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNG---DTSKPCQYLRWEKMYEI 242
S H N++ + + + L+ EF P G L K + D + ++
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------- 121
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFG 285
+A L Y H +++H DIKP N+L+ KI+DFG
Sbjct: 122 --ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 30/194 (15%)
Query: 200 CLEGNNRAL-IYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLH-RGC 257
C + +R + E++ G L F P ++ R+ Y I +A L YLH RG
Sbjct: 89 CFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARF---YSAEISLA--LNYLHERG- 141
Query: 258 STRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVF-S 316
I++ D+K N+LLD + K++D+G+ K S GT YIA E+
Sbjct: 142 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC---GTPNYIAPEILRG 195
Query: 317 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDNSSEVYFPHWIYRHVEQDREFKLLGV 376
++G D ++ G+++ E++ ++ D + SS+ + +Q+ E L V
Sbjct: 196 EDYG---FSVDWWALGVLMFEMMAGRSPFD--IVGSSD---------NPDQNTEDYLFQV 241
Query: 377 VTKKENEIAKKMII 390
+ +K+ I + M +
Sbjct: 242 ILEKQIRIPRSMSV 255
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 186 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNG---DTSKPCQYLRWEKMYEI 242
S H N++ + + + L+ EF P G L K + D + ++
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------- 122
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFG 285
+A L Y H +++H DIKP N+L+ KI+DFG
Sbjct: 123 --ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
+H N+V L L+ E+ G + + V +G + ++ + I
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQ-------IV 123
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
++Y H+ I+H D+K N+LLD D KI+DFG + T + L G
Sbjct: 124 SAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFT----FGNKLDAFCGAP 176
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
Y A E+F + + DV+S G+++ LV
Sbjct: 177 PYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 207
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 16/152 (10%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
+H N+V L L+ E+ G + + V +G + ++ + I
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------IV 123
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
++Y H+ I+H D+K N+LLD D KI+DFG + T + L G+
Sbjct: 124 SAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT----FGNKLDTFCGSP 176
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
Y A E+F + + DV+S G+++ LV
Sbjct: 177 PYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 207
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 16/152 (10%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
+H N+V L L+ E+ G + + V +G + ++ + I
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------IV 123
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
++Y H+ I+H D+K N+LLD D KI+DFG + T + L G+
Sbjct: 124 SAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT----FGNKLDTFCGSP 176
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
Y A E+F + + DV+S G+++ LV
Sbjct: 177 PYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 207
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 16/152 (10%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
+H N+V L L+ E+ G + + V +G + ++ + I
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------IV 123
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
++Y H+ I+H D+K N+LLD D KI+DFG + T + L G+
Sbjct: 124 SAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT----FGNKLDEFCGSP 176
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
Y A E+F + + DV+S G+++ LV
Sbjct: 177 PYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 207
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 31/164 (18%)
Query: 187 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL------EKFVYNGDTSKPCQYLRWEKMY 240
+ H N+V L E + L+++ + G L +F D S Q
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-------- 112
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAKLCTTKKGIV 297
I + + Y H S I+H ++KP N+LL + K++DFGLA +
Sbjct: 113 ----QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE--- 162
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMI-MELVG 340
+ G GT GY++ EV ++ S D+++ G+++ + LVG
Sbjct: 163 -AWHGFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILYILLVG 203
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 16/152 (10%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
+H N+V L L+ E+ G + + V +G + ++ + I
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------IV 123
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTI 307
++Y H+ I+H D+K N+LLD D KI+DFG + T + L G+
Sbjct: 124 SAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT----FGNKLDTFCGSP 176
Query: 308 GYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
Y A E+F + + DV+S G+++ LV
Sbjct: 177 PYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 31/164 (18%)
Query: 187 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL------EKFVYNGDTSKPCQYLRWEKMY 240
+ H N+V L E + L+++ + G L +F D S Q
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-------- 111
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAKLCTTKKGIV 297
I + + Y H S I+H ++KP N+LL + K++DFGLA +
Sbjct: 112 ----QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE--- 161
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMI-MELVG 340
+ G GT GY++ EV ++ S D+++ G+++ + LVG
Sbjct: 162 -AWHGFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILYILLVG 202
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 200 CLEGNNRAL-IYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLH-RGC 257
C + +R + E++ G L F P ++ R+ Y I +A L YLH RG
Sbjct: 78 CFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARF---YSAEISLA--LNYLHERG- 130
Query: 258 STRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSR 317
I++ D+K N+LLD + K++D+G+ K S GT YIA E+
Sbjct: 131 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC---GTPNYIAPEILRG 184
Query: 318 NFGEVSHKSDVYSFGMMIMELVGCKNNLD 346
+ D ++ G+++ E++ ++ D
Sbjct: 185 E--DYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 200 CLEGNNRAL-IYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLH-RGC 257
C + +R + E++ G L F P ++ R+ Y I +A L YLH RG
Sbjct: 74 CFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARF---YSAEISLA--LNYLHERG- 126
Query: 258 STRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVF-S 316
I++ D+K N+LLD + K++D+G+ K S GT YIA E+
Sbjct: 127 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC---GTPNYIAPEILRG 180
Query: 317 RNFGEVSHKSDVYSFGMMIMELVGCKNNLD 346
++G D ++ G+++ E++ ++ D
Sbjct: 181 EDYG---FSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 31/164 (18%)
Query: 187 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL------EKFVYNGDTSKPCQYLRWEKMY 240
+ H N+V L E + L+++ + G L +F D S Q
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-------- 112
Query: 241 EIVIGIAKGLEYLHRGCSTRILHFDIKPHNILL---DQDFCPKISDFGLAKLCTTKKGIV 297
I + + Y H S I+H ++KP N+LL + K++DFGLA +
Sbjct: 113 ----QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE--- 162
Query: 298 SSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMI-MELVG 340
+ G GT GY++ EV ++ S D+++ G+++ + LVG
Sbjct: 163 -AWHGFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILYILLVG 203
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
IA GL +L S I++ D+K N++LD + KI+DFG+ K G+ + G
Sbjct: 451 IAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFC--G 504
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
T YIA E+ + + D ++FG+++ E++
Sbjct: 505 TPDYIAPEIIA--YQPYGKSVDWWAFGVLLYEMLA 537
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGARG 305
IA GL +L S I++ D+K N++LD + KI+DFG+ K G+ + G
Sbjct: 130 IAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFC--G 183
Query: 306 TIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVG 340
T YIA E+ + + D ++FG+++ E++
Sbjct: 184 TPDYIAPEIIA--YQPYGKSVDWWAFGVLLYEMLA 216
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 27/139 (19%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSL------EKFVYNGDTSKPCQYLRWEKMYEI 242
H N+V L E + LI++ + G L ++ D S Q +
Sbjct: 79 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI-------- 130
Query: 243 VIGIAKGLEYLHRGCSTRILHFDIKPHNILLDQDF---CPKISDFGLAKLCTTKKGIVSS 299
LE + ++H D+KP N+LL K++DFGLA +G +
Sbjct: 131 -------LEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQA 180
Query: 300 LLGARGTIGYIALEVFSRN 318
G GT GY++ EV ++
Sbjct: 181 WFGFAGTPGYLSPEVLRKD 199
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 189 SHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIA 247
H N+V L E L+++ + G L E V +Y + I
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-------EYYSEADASHCIHQIL 140
Query: 248 KGLEYLHRGCSTRILHFDIKPHNILLD---QDFCPKISDFGLAKLCTTKKGIVSSLLGAR 304
+ + ++H+ I+H D+KP N+LL + K++DFGLA +G + G
Sbjct: 141 ESVNHIHQ---HDIVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQGEQQAWFGFA 194
Query: 305 GTIGYIALEVFSRN-FGEVSHKSDVYSFGMMIMELV 339
GT GY++ EV ++ +G+ D+++ G+++ L+
Sbjct: 195 GTPGYLSPEVLRKDPYGK---PVDIWACGVILYILL 227
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 19/127 (14%)
Query: 246 IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKGIVSSLLGAR- 304
I L +LH I++ D+K N+LLD + K++DFG+ K+GI + + A
Sbjct: 133 IISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMC-----KEGICNGVTTATF 184
Query: 305 -GTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDN-------SSEVY 356
GT YIA E+ D ++ G+++ E++ ++ ++ + EV
Sbjct: 185 CGTPDYIAPEILQEML--YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV 242
Query: 357 FPHWIYR 363
+P W++
Sbjct: 243 YPTWLHE 249
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 261 ILHFDIKPHNILL---DQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSR 317
I+H D+KP N+LL + K++DFGLA +G + G GT GY++ EV +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 318 N 318
+
Sbjct: 181 D 181
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 261 ILHFDIKPHNILL---DQDFCPKISDFGLAKLCTTKKGIVSSLLGARGTIGYIALEVFSR 317
I+H D+KP N+LL + K++DFGLA +G + G GT GY++ EV +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 318 N 318
+
Sbjct: 181 D 181
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 237 EKMYEIVIG-IAKGLEYLHRGCSTRILHFDIKPHNILLDQDFCPKISDFGLAKLCTTKKG 295
E +I +G I LE+LH+ I++ DIK NILLD + ++DFGL+K +
Sbjct: 158 EHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE- 213
Query: 296 IVSSLLGARGTIGYIALEVFSRNFGEVSHKSDVYSFGMMIMELV 339
GTI Y+A ++ D +S G+++ EL+
Sbjct: 214 -TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELL 256
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,702,961
Number of Sequences: 62578
Number of extensions: 507483
Number of successful extensions: 2537
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 270
Number of HSP's that attempted gapping in prelim test: 1027
Number of HSP's gapped (non-prelim): 1074
length of query: 450
length of database: 14,973,337
effective HSP length: 102
effective length of query: 348
effective length of database: 8,590,381
effective search space: 2989452588
effective search space used: 2989452588
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)