Query 013075
Match_columns 450
No_of_seqs 182 out of 1627
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 03:43:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013075.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013075hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sqr_A Laccase; multicopper ox 100.0 2.2E-83 7.6E-88 666.5 41.2 383 1-450 121-520 (580)
2 1aoz_A Ascorbate oxidase; oxid 100.0 4.7E-83 1.6E-87 668.7 43.9 417 1-450 57-501 (552)
3 3pxl_A Laccase; 4-copper prote 100.0 6.9E-79 2.4E-83 625.7 39.5 377 1-450 61-447 (499)
4 3t6v_A Laccase; beta barrel, o 100.0 1.9E-78 6.3E-83 622.5 38.9 376 1-450 62-447 (495)
5 1zpu_A Iron transport multicop 100.0 7E-78 2.4E-82 625.3 41.1 382 1-450 57-457 (534)
6 1v10_A Laccase; multicopper bl 100.0 3.1E-76 1.1E-80 612.2 36.5 376 1-450 82-467 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 7.9E-76 2.7E-80 607.1 36.3 374 1-450 61-446 (503)
8 2q9o_A Laccase-1; multicopper 100.0 2.8E-75 9.7E-80 609.4 39.3 386 1-450 90-497 (559)
9 2uxt_A Protein SUFI, SUFI; oxi 100.0 2E-66 6.9E-71 529.5 24.2 326 1-450 72-413 (451)
10 2xu9_A Laccase; oxidoreductase 100.0 2E-65 6.8E-70 521.5 26.3 323 1-450 69-416 (439)
11 3aw5_A Multicopper oxidase; be 100.0 3.4E-65 1.2E-69 519.7 22.5 334 1-449 60-426 (448)
12 2wsd_A Spore coat protein A; o 100.0 2E-64 7E-69 523.1 27.2 348 1-450 102-486 (513)
13 3abg_A Bilirubin oxidase; clea 100.0 7.9E-64 2.7E-68 518.9 26.3 341 1-450 91-451 (534)
14 3gyr_A PHS, phenoxazinone synt 100.0 2.4E-61 8.2E-66 513.1 27.3 379 1-450 128-567 (612)
15 3zx1_A Oxidoreductase, putativ 100.0 3E-60 1E-64 484.3 26.5 338 1-450 104-457 (481)
16 2g23_A PHS, phenoxazinone synt 100.0 5.5E-59 1.9E-63 486.3 29.4 375 1-450 128-567 (612)
17 3od3_A Blue copper oxidase CUE 100.0 1.5E-58 5.3E-63 471.5 23.7 350 1-449 70-461 (488)
18 2j5w_A Ceruloplasmin, ferroxid 100.0 5.4E-44 1.9E-48 397.3 24.2 210 1-233 117-359 (1065)
19 3g5w_A Multicopper oxidase typ 100.0 1.9E-43 6.4E-48 344.0 20.1 217 1-232 56-278 (318)
20 2zwn_A Two-domain type laccase 100.0 1.9E-42 6.6E-47 340.4 23.5 217 1-232 57-279 (339)
21 2r7e_A Coagulation factor VIII 100.0 1.2E-41 4E-46 364.5 12.8 193 1-210 97-314 (742)
22 1kbv_A ANIA, major outer membr 100.0 6.8E-39 2.3E-43 313.6 19.0 206 1-233 94-310 (327)
23 3gdc_A Multicopper oxidase; be 100.0 4.4E-37 1.5E-41 295.5 20.4 181 1-210 88-273 (288)
24 2zoo_A Probable nitrite reduct 100.0 6.9E-36 2.4E-40 304.8 18.8 208 1-233 84-300 (442)
25 3tas_A Small laccase, multi-co 100.0 6.2E-36 2.1E-40 290.7 16.3 184 1-230 64-271 (313)
26 2j5w_A Ceruloplasmin, ferroxid 100.0 1.1E-35 3.6E-40 330.8 17.4 328 2-450 652-1034(1065)
27 2dv6_A Nitrite reductase; elec 100.0 6.5E-35 2.2E-39 298.2 20.8 312 21-450 86-409 (447)
28 1mzy_A Copper-containing nitri 100.0 1.6E-34 5.4E-39 283.8 20.0 216 1-233 83-321 (333)
29 3t9w_A Small laccase, multi-co 100.0 7.9E-35 2.7E-39 280.8 16.7 184 1-230 80-287 (299)
30 3kw8_A Laccase, putative coppe 100.0 1.5E-34 5E-39 276.2 17.9 168 1-210 58-250 (276)
31 1oe1_A Dissimilatory copper-co 100.0 2.7E-34 9.4E-39 282.6 19.6 214 2-233 85-321 (336)
32 1sdd_B Coagulation factor V; c 100.0 1.4E-34 4.9E-39 308.0 16.8 193 1-210 91-312 (647)
33 1sdd_A Coagulation factor V; c 100.0 1.3E-35 4.3E-40 287.8 5.9 182 1-210 82-285 (306)
34 2bw4_A Copper-containing nitri 100.0 1.2E-33 4E-38 278.5 14.3 215 1-233 90-327 (340)
35 2r7e_B Coagulation factor VIII 100.0 8.4E-34 2.9E-38 304.2 9.9 192 1-210 221-441 (770)
36 2dv6_A Nitrite reductase; elec 100.0 5.1E-31 1.7E-35 269.3 21.5 205 1-233 219-436 (447)
37 3cg8_A Laccase; oxidoreductase 100.0 2.2E-31 7.7E-36 261.4 18.1 184 1-231 99-307 (343)
38 2r7e_A Coagulation factor VIII 100.0 2.6E-32 8.8E-37 292.2 4.8 190 1-211 474-697 (742)
39 2zwn_A Two-domain type laccase 99.9 1.1E-21 3.9E-26 192.4 15.8 220 111-450 23-247 (339)
40 3gdc_A Multicopper oxidase; be 99.8 9.2E-20 3.1E-24 174.8 13.4 209 111-450 54-264 (288)
41 3g5w_A Multicopper oxidase typ 99.8 1.1E-19 3.9E-24 176.3 14.2 222 112-450 23-246 (318)
42 3cg8_A Laccase; oxidoreductase 99.8 4.7E-19 1.6E-23 173.7 14.2 189 131-450 76-282 (343)
43 3kw8_A Laccase, putative coppe 99.7 8.2E-17 2.8E-21 153.3 14.3 197 114-450 27-241 (276)
44 3t9w_A Small laccase, multi-co 99.7 2.7E-16 9.3E-21 151.2 13.5 189 131-450 57-263 (299)
45 1kbv_A ANIA, major outer membr 99.6 1.9E-15 6.4E-20 147.4 16.3 224 111-450 58-282 (327)
46 1sdd_A Coagulation factor V; c 99.6 5.4E-16 1.8E-20 149.8 6.2 212 114-450 52-276 (306)
47 3tas_A Small laccase, multi-co 99.6 1.2E-14 4.1E-19 140.7 15.5 189 131-450 41-247 (313)
48 1sdd_B Coagulation factor V; c 99.6 1.6E-14 5.4E-19 153.7 15.2 222 131-450 68-303 (647)
49 2bw4_A Copper-containing nitri 99.5 5.5E-13 1.9E-17 130.8 16.0 80 110-209 58-138 (340)
50 2zoo_A Probable nitrite reduct 99.5 5.1E-13 1.7E-17 135.7 14.2 224 111-450 48-272 (442)
51 2r7e_B Coagulation factor VIII 99.4 3.3E-14 1.1E-18 152.5 5.0 216 130-450 197-432 (770)
52 1mzy_A Copper-containing nitri 99.3 3.6E-11 1.2E-15 117.4 16.5 80 111-210 52-132 (333)
53 1oe1_A Dissimilatory copper-co 99.3 9.6E-11 3.3E-15 114.6 17.4 79 111-209 53-132 (336)
54 3cvb_A Plastocyanin; cupredoxi 99.1 4.7E-12 1.6E-16 102.0 0.7 64 2-67 40-105 (105)
55 2uxt_A Protein SUFI, SUFI; oxi 99.0 3.1E-09 1.1E-13 107.8 15.2 171 2-210 216-426 (451)
56 1aoz_A Ascorbate oxidase; oxid 98.9 3.1E-08 1.1E-12 103.1 18.0 85 111-209 22-107 (552)
57 2xu9_A Laccase; oxidoreductase 98.9 2.1E-08 7.1E-13 101.5 15.2 90 113-210 335-425 (439)
58 3pxl_A Laccase; 4-copper prote 98.9 7.1E-08 2.4E-12 98.8 18.9 227 111-449 22-253 (499)
59 3t6v_A Laccase; beta barrel, o 98.8 7E-08 2.4E-12 98.8 17.4 229 111-449 23-256 (495)
60 2q9o_A Laccase-1; multicopper 98.8 1.2E-07 4E-12 98.8 18.3 225 111-448 55-281 (559)
61 1hfu_A Laccase 1; oxidoreducta 98.8 8.3E-08 2.8E-12 98.7 17.0 225 111-449 23-252 (503)
62 1v10_A Laccase; multicopper bl 98.8 8.7E-08 3E-12 98.9 17.2 232 111-449 43-279 (521)
63 3sqr_A Laccase; multicopper ox 98.8 1.3E-07 4.4E-12 98.2 17.6 234 111-449 86-320 (580)
64 1zpu_A Iron transport multicop 98.7 2.3E-07 8E-12 95.9 16.6 86 111-209 22-108 (534)
65 2cal_A Rusticyanin; iron respi 98.7 1.3E-08 4.5E-13 87.4 4.4 62 3-66 83-154 (154)
66 3aw5_A Multicopper oxidase; be 98.6 5.1E-07 1.7E-11 91.4 13.5 78 114-209 28-106 (448)
67 2ov0_A Amicyanin; beta-sandwic 98.6 5.3E-08 1.8E-12 78.1 4.8 45 16-66 61-105 (105)
68 3abg_A Bilirubin oxidase; clea 98.5 1E-06 3.5E-11 91.0 14.0 82 111-210 57-138 (534)
69 3od3_A Blue copper oxidase CUE 98.5 4.8E-07 1.6E-11 92.1 10.4 90 114-210 380-475 (488)
70 3zx1_A Oxidoreductase, putativ 98.4 7.2E-07 2.5E-11 90.8 10.8 90 113-210 372-466 (481)
71 1iby_A Nitrosocyanin; RED copp 98.4 6.4E-08 2.2E-12 78.6 1.9 43 24-67 70-112 (112)
72 2g23_A PHS, phenoxazinone synt 98.4 9E-07 3.1E-11 92.5 10.6 90 113-210 460-576 (612)
73 2gim_A Plastocyanin; beta shee 98.2 7.4E-07 2.5E-11 71.4 3.8 42 25-67 65-106 (106)
74 2wsd_A Spore coat protein A; o 98.0 1.8E-05 6.1E-10 81.5 9.6 90 113-210 385-495 (513)
75 1fwx_A Nitrous oxide reductase 98.0 2.4E-06 8.3E-11 88.2 3.0 56 5-69 537-594 (595)
76 3tu6_A Pseudoazurin (blue copp 97.8 2.7E-05 9.3E-10 64.2 5.5 40 26-69 59-98 (127)
77 3erx_A Pseudoazurin; copper pr 97.8 3.7E-05 1.3E-09 63.0 6.1 39 27-69 58-96 (123)
78 2aan_A Auracyanin A; cupredoxi 97.8 1.9E-05 6.7E-10 66.3 4.5 39 27-66 101-139 (139)
79 2plt_A Plastocyanin; electron 97.7 2.8E-05 9.5E-10 61.0 4.4 37 26-66 62-98 (98)
80 1pcs_A Plastocyanin; electron 97.7 2.8E-05 9.5E-10 61.0 4.1 37 26-66 62-98 (98)
81 1byp_A Protein (plastocyanin); 97.6 6.7E-05 2.3E-09 58.9 5.7 37 26-66 63-99 (99)
82 3ef4_A Pseudoazurin, blue copp 97.6 7.7E-05 2.6E-09 61.1 5.9 40 26-69 58-97 (124)
83 1bxv_A Plastocyanin; copper pr 97.6 4.9E-05 1.7E-09 58.6 4.3 37 26-66 55-91 (91)
84 3gyr_A PHS, phenoxazinone synt 97.6 0.00022 7.5E-09 75.0 10.6 79 131-210 471-576 (612)
85 1kdj_A Plastocyanin; electron 97.6 3.6E-05 1.2E-09 60.9 3.5 37 26-66 66-102 (102)
86 1plc_A Plastocyanin; electron 97.5 8.5E-05 2.9E-09 58.3 5.1 37 26-66 63-99 (99)
87 2aan_A Auracyanin A; cupredoxi 97.5 0.0002 6.7E-09 60.1 7.1 71 131-209 34-125 (139)
88 1b3i_A PETE protein, protein ( 97.5 6.8E-05 2.3E-09 58.6 3.6 37 26-66 61-97 (97)
89 1pmy_A Pseudoazurin; electron 97.4 0.00017 5.8E-09 59.1 5.6 39 27-69 58-96 (123)
90 4hci_A Cupredoxin 1; structura 97.4 0.00011 3.9E-09 57.8 4.2 39 26-66 62-100 (100)
91 1paz_A Pseudoazurin precursor; 97.4 0.00021 7.2E-09 58.5 5.9 39 27-69 58-96 (123)
92 3c75_A Amicyanin; copper prote 97.3 0.00017 6E-09 59.9 4.8 39 22-66 94-132 (132)
93 1qhq_A Protein (auracyanin); e 97.3 0.00017 5.9E-09 60.5 4.3 41 26-67 99-140 (140)
94 1cuo_A Protein (azurin ISO-2); 97.2 0.00022 7.6E-09 58.9 3.8 42 26-67 86-129 (129)
95 3ay2_A Lipid modified azurin p 97.2 0.00023 8E-09 61.3 3.7 42 26-67 125-167 (167)
96 1iuz_A Plastocyanin; electron 97.1 0.00036 1.2E-08 54.6 4.3 37 26-66 62-98 (98)
97 1iby_A Nitrosocyanin; RED copp 97.1 0.0019 6.7E-08 51.7 8.7 62 131-210 37-98 (112)
98 2ux6_A Pseudoazurin; type-1 co 97.0 0.00091 3.1E-08 54.6 5.4 38 26-69 57-94 (122)
99 1id2_A Amicyanin; beta barrel, 96.8 0.0011 3.9E-08 52.6 4.8 35 26-66 72-106 (106)
100 2ccw_A Azurin II, AZN-2; elect 96.8 0.00099 3.4E-08 54.9 4.0 42 26-67 86-129 (129)
101 2iaa_C Azurin; quinoprotein, t 96.7 0.001 3.4E-08 54.8 3.9 41 26-67 85-128 (128)
102 3cvb_A Plastocyanin; cupredoxi 96.7 0.00089 3E-08 52.9 3.5 73 131-208 18-90 (105)
103 4hci_A Cupredoxin 1; structura 96.5 0.0084 2.9E-07 46.8 7.8 61 131-209 27-87 (100)
104 1nwp_A Azurin; electron transp 96.5 0.0017 5.8E-08 53.4 3.6 40 26-66 86-128 (128)
105 2cal_A Rusticyanin; iron respi 96.3 0.014 4.9E-07 49.5 8.3 84 113-209 52-139 (154)
106 1qhq_A Protein (auracyanin); e 96.2 0.013 4.4E-07 48.8 7.5 78 131-209 32-124 (140)
107 2ccw_A Azurin II, AZN-2; elect 95.9 0.0092 3.1E-07 49.0 5.0 78 131-208 17-113 (129)
108 1cuo_A Protein (azurin ISO-2); 95.7 0.016 5.4E-07 47.6 5.8 78 131-208 17-113 (129)
109 1nwp_A Azurin; electron transp 95.7 0.013 4.3E-07 48.1 5.2 78 131-208 17-113 (128)
110 2iaa_C Azurin; quinoprotein, t 95.6 0.032 1.1E-06 45.7 7.3 78 131-208 16-112 (128)
111 3ay2_A Lipid modified azurin p 95.6 0.015 5.2E-07 49.9 5.4 79 131-209 57-152 (167)
112 3fsa_A Azurin; copper, cupredo 95.5 0.017 5.8E-07 46.8 5.0 78 131-208 17-113 (125)
113 2gim_A Plastocyanin; beta shee 95.2 0.0037 1.3E-07 49.4 0.4 73 131-208 19-91 (106)
114 3sbq_A Nitrous-oxide reductase 95.1 0.014 4.7E-07 59.4 4.3 42 26-68 595-638 (638)
115 1fwx_A Nitrous oxide reductase 94.9 0.19 6.5E-06 51.9 12.1 64 131-211 512-577 (595)
116 2plt_A Plastocyanin; electron 94.3 0.081 2.8E-06 40.7 6.1 68 131-208 17-84 (98)
117 3fsa_A Azurin; copper, cupredo 94.2 0.033 1.1E-06 45.2 3.6 37 27-66 87-125 (125)
118 1bxv_A Plastocyanin; copper pr 94.1 0.14 4.8E-06 38.6 7.0 60 131-208 18-77 (91)
119 1kdj_A Plastocyanin; electron 94.0 0.039 1.3E-06 42.9 3.7 65 131-208 16-88 (102)
120 1b3i_A PETE protein, protein ( 93.9 0.11 3.7E-06 39.9 6.0 64 131-208 18-83 (97)
121 1pcs_A Plastocyanin; electron 93.8 0.067 2.3E-06 41.2 4.5 67 131-208 18-84 (98)
122 1iuz_A Plastocyanin; electron 92.4 0.31 1.1E-05 37.4 6.6 69 131-209 17-85 (98)
123 2ov0_A Amicyanin; beta-sandwic 92.4 0.2 6.9E-06 39.1 5.5 63 131-209 32-94 (105)
124 3sbq_A Nitrous-oxide reductase 91.3 1.5 5.1E-05 44.8 11.5 65 131-212 557-623 (638)
125 3erx_A Pseudoazurin; copper pr 90.5 0.21 7.1E-06 40.5 3.7 75 131-230 20-94 (123)
126 1plc_A Plastocyanin; electron 89.9 0.23 8E-06 38.2 3.5 68 131-208 16-85 (99)
127 2cua_A Protein (CUA); CUA cent 89.7 1.5 5.2E-05 35.9 8.4 62 132-212 60-121 (135)
128 1byp_A Protein (plastocyanin); 89.6 0.24 8.3E-06 38.0 3.4 68 131-208 16-85 (99)
129 1id2_A Amicyanin; beta barrel, 87.6 0.88 3E-05 35.5 5.4 63 131-209 33-95 (106)
130 3s8f_B Cytochrome C oxidase su 86.9 2.5 8.6E-05 36.0 8.3 62 132-212 93-154 (168)
131 3tu6_A Pseudoazurin (blue copp 86.4 0.34 1.2E-05 39.4 2.4 76 131-231 22-97 (127)
132 3c75_A Amicyanin; copper prote 86.0 1.1 3.8E-05 36.5 5.4 63 131-209 59-121 (132)
133 2cua_A Protein (CUA); CUA cent 85.6 0.62 2.1E-05 38.3 3.7 40 27-67 94-135 (135)
134 3isy_A Bsupi, intracellular pr 85.3 8.3 0.00028 30.7 10.0 73 138-211 16-103 (120)
135 1paz_A Pseudoazurin precursor; 84.8 0.75 2.6E-05 37.1 3.7 60 131-208 20-79 (123)
136 2ux6_A Pseudoazurin; type-1 co 83.1 1.1 3.9E-05 35.9 4.2 73 131-230 20-92 (122)
137 1pmy_A Pseudoazurin; electron 82.6 0.85 2.9E-05 36.8 3.2 60 131-208 20-79 (123)
138 3s8f_B Cytochrome C oxidase su 82.2 1.3 4.4E-05 37.8 4.3 40 27-67 127-168 (168)
139 3ef4_A Pseudoazurin, blue copp 77.3 1.4 4.7E-05 35.6 2.8 61 131-209 21-81 (124)
140 1cyx_A CYOA; electron transpor 69.9 29 0.001 30.3 9.6 63 132-213 41-103 (205)
141 2r39_A FIXG-related protein; s 65.8 21 0.00072 28.0 7.4 47 140-196 33-81 (118)
142 3hb3_B Cytochrome C oxidase su 53.5 75 0.0026 29.4 9.8 63 132-213 189-251 (298)
143 2gsm_B Cytochrome C oxidase su 52.9 65 0.0022 29.3 9.1 63 132-213 171-233 (262)
144 2p9r_A Alpha-2-M, alpha-2-macr 39.3 88 0.003 23.3 6.8 70 135-209 12-84 (102)
145 1v54_B Cytochrome C oxidase po 36.4 1.5E+02 0.005 26.2 8.6 63 132-213 140-202 (227)
146 2wtp_A ORF131 protein, CZCE; m 35.4 14 0.00048 29.7 1.5 24 132-155 71-94 (131)
147 3kmh_A D-lyxose isomerase; cup 35.2 72 0.0025 28.4 6.1 51 132-192 129-184 (246)
148 1xwv_A DER F II; beta sheets, 29.0 34 0.0012 27.4 2.8 23 16-39 70-92 (129)
149 3e8v_A Possible transglutamina 27.6 1.7E+02 0.0057 21.4 6.0 45 163-207 4-48 (82)
150 1fft_B Ubiquinol oxidase; elec 27.3 1E+02 0.0035 28.7 6.2 63 132-213 151-213 (315)
151 2f1e_A Protein APAG; APAG prot 25.6 59 0.002 26.0 3.6 21 16-37 66-86 (127)
152 1xq4_A Protein APAG; all beta 25.2 54 0.0018 26.7 3.3 20 17-37 71-90 (139)
153 1nep_A EPV20, BNPC2, epididyma 25.0 44 0.0015 26.7 2.8 24 16-39 71-94 (130)
154 2r5o_A Putative ATP binding co 23.5 2E+02 0.0069 24.2 7.0 74 134-210 64-146 (188)
155 1xvs_A Protein APAG; MCSG APC2 23.4 60 0.0021 25.9 3.2 21 16-37 65-85 (126)
156 3isy_A Bsupi, intracellular pr 22.9 60 0.0021 25.6 3.1 37 15-51 59-100 (120)
157 2xg5_A PAPD, chaperone protein 22.8 1E+02 0.0035 27.0 5.1 20 131-150 54-73 (218)
158 1tza_A APAG protein, SOR45; st 22.3 53 0.0018 26.5 2.7 20 17-37 66-85 (134)
159 4ay0_A Chaperone protein CAF1M 20.3 1.6E+02 0.0053 25.8 5.7 21 131-151 65-85 (218)
No 1
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=2.2e-83 Score=666.46 Aligned_cols=383 Identities=27% Similarity=0.466 Sum_probs=303.2
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChhhhhc-ceeEEEEEecCCCCCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRA-TVYGALIVYPRMGSPYPFPMPK 79 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~~ 79 (450)
|+|||||++|.+++||||+|++|||||+||++|+|+|++ .|+||||||||...|++ ||+|+|||+++.+. .+|
T Consensus 121 tsIHwHGl~~~~t~~~DGvp~vTq~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD 194 (580)
T 3sqr_A 121 TSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYD 194 (580)
T ss_dssp BCEEETTCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCS
T ss_pred ceEEecccccCCCccccCCCccccCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccC-----CCC
Confidence 689999999999999999999999999999999999998 79999999999999996 99999999988653 357
Q ss_pred Cce-eEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCC---------CceeeEEeeCCCEEEEEEEec
Q 013075 80 REI-PILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSS---------KETVRFPVEAGETILLRIINS 149 (450)
Q Consensus 80 ~e~-~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~---------~~~~~~~v~~G~~~rlRliN~ 149 (450)
+|. +|+|+||+++...+++......+ +.+++++||||+.. ++|+. +..++++|++|++|||||||+
T Consensus 195 ~d~~~l~l~Dw~~~~~~~~~~~~~~~~--~~~~d~~liNG~~~--~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa 270 (580)
T 3sqr_A 195 EDVGVIFLQDWAHESVFEIWDTARLGA--PPALENTLMNGTNT--FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINV 270 (580)
T ss_dssp EEEEEEEEEEECSSCHHHHHHHHTTSC--CCCBSEEEETTBCC--CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEEC
T ss_pred ccceEEEEEEEecCCHHHHHHHHhccC--CCCCceEEECCccc--CCCccccccccccCCCceeEEEcCCCEEEEEEEec
Confidence 787 99999999999988877655432 45889999999963 55542 346899999999999999999
Q ss_pred CCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEec
Q 013075 150 AMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYK 229 (450)
Q Consensus 150 ~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~ 229 (450)
|....+.|+|+||+|+|||+||.+++|+.++.|.|++||||||+|++++.+|+|||++.....|..........|||+|.
T Consensus 271 ~~~~~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~ 350 (580)
T 3sqr_A 271 GIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYD 350 (580)
T ss_dssp CSSCCEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESS
T ss_pred cCCceeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEEC
Confidence 99999999999999999999999999999999999999999999999988899999999876553223344689999998
Q ss_pred cCCCCCCCCCCCCCCCcCCCCCCCCCcc-chhhhhhcccccccCCCCcccceeEEEEeccceeccCCCCCCCccCCCCCe
Q 013075 230 SAPFNGKKGKSRSSAPIFPILPGFNDTA-TATAFTARIKSLHQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTR 308 (450)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~p~~p~~~~~~-~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (450)
+++. .. |..+.+.... +.......|+++.+..++...+.++.+.++ .+..
T Consensus 351 ~~~~--------~~----P~~~~~~~~~~~~~~~~~~L~P~~~~~~~~~~~~~~~l~~~-----------------~~~~ 401 (580)
T 3sqr_A 351 SSSI--------AN----PTSVGTTPRGTCEDEPVASLVPHLALDVGGYSLVDEQVSSA-----------------FTNY 401 (580)
T ss_dssp TTCC--------CC----CCCCCCCCCCCSCCSCGGGCCBSSCCBCCSEEEEEEEEEEE-----------------ESSS
T ss_pred CCCC--------CC----CCCCCCCccchhhcccccccccCCCCCCCCccceEEEEEec-----------------cCCc
Confidence 6543 11 2222222211 111111345555555555555555555442 2236
Q ss_pred eeeeeccccccC-CCchhhHHHHHhCCCCCccCCCCCCCCcccccCCCCCCCCcCCCCCceeEEee----cCCEEEEEEE
Q 013075 309 FAASINNISFVF-PRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLK----FGSRVQIVFQ 383 (450)
Q Consensus 309 ~~~~iN~~~~~~-p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~----~g~~v~ivi~ 383 (450)
+.|+|||++|.. +..|.|++ .+.+. ++++ ...+++.++ .|++|||+|+
T Consensus 402 ~~w~iN~~s~~~~~~~P~L~~-~~~g~-----~~~~---------------------~~~~~~~~~~~~~~~~~VeiVi~ 454 (580)
T 3sqr_A 402 FTWTINSSSLLLDWSSPTTLK-IFNNE-----TIFP---------------------TEYNVVALEQTNANEEWVVYVIE 454 (580)
T ss_dssp EEEEETTBCCCCCTTSCHHHH-HHTTC-----CCCC---------------------GGGCEEEECC----CCEEEEEEE
T ss_pred eeEEECCEecccCCCCCchhh-hhcCC-----ccCC---------------------CCcceeecccccCCCcEEEEEEe
Confidence 799999999975 46645544 33221 1221 112345554 6999999999
Q ss_pred eCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEccCCC
Q 013075 384 DTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 384 N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG 450 (450)
|.+.. .+.||||||||+||||++|.|.|+++++...+|+.||++||||.|+++||++|||+|||||
T Consensus 455 n~~~~-~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG 520 (580)
T 3sqr_A 455 DLTGF-GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPG 520 (580)
T ss_dssp ECSSS-CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCE
T ss_pred CCCcc-ccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCe
Confidence 97532 5789999999999999999999998777778999999999999999999999999999998
No 2
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=4.7e-83 Score=668.70 Aligned_cols=417 Identities=29% Similarity=0.534 Sum_probs=325.1
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChhhhhc-ceeEEEEEecCCCCCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRA-TVYGALIVYPRMGSPYPFPMPK 79 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~~ 79 (450)
|+|||||++|.+++||||+|++|||+|+||++|+|+|++ +++||||||||...|++ ||+|+|||+++.....++ .+|
T Consensus 57 tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d 134 (552)
T 1aoz_A 57 VVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYD 134 (552)
T ss_dssp BCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCS
T ss_pred eeEEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCC
Confidence 689999999999999999999999999999999999998 89999999999999986 999999999987554455 357
Q ss_pred CceeEEEeeeecCChHHHHHHhhhcC-CCCCCCCceeeCCcccCCCCC-------------CCC-----ceeeEEeeCCC
Q 013075 80 REIPILIGEWWDRDPMDVLRQALFTG-GAPNISDALTINGQPGDLYRC-------------SSK-----ETVRFPVEAGE 140 (450)
Q Consensus 80 ~e~~l~l~d~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~~~-------------~~~-----~~~~~~v~~G~ 140 (450)
+|++|+|+||+++...+++....... .....++.+||||+.. ++| +.. ..+.++|++||
T Consensus 135 ~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~ 212 (552)
T 1aoz_A 135 GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKK 212 (552)
T ss_dssp EEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTC
T ss_pred ccceEEeecccCCCHHHHHhhhhcccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCC
Confidence 89999999999998877765433211 1113578999999974 444 321 23489999999
Q ss_pred EEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEe-CCCCceeEEEeeeeccccccCCC
Q 013075 141 TILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTA-DQPPARYYMAAHAYNTANAAFDN 219 (450)
Q Consensus 141 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~-~~~~g~y~l~~~~~~~~~~~~~~ 219 (450)
+|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.++.|.|++||||||+|++ ++.+|+|||++.... +. .+.
T Consensus 213 ~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~--~~~ 289 (552)
T 1aoz_A 213 TYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RH--PNT 289 (552)
T ss_dssp EEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SC--CCS
T ss_pred EEEEEEEcccccceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CC--CCC
Confidence 99999999999999999999999999999999999999999999999999999999 556799999998764 21 234
Q ss_pred ccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccc---cCCCCcccceeEEEEeccceeccCCC
Q 013075 220 TTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLH---QVQVPTVIDENLFFTVGLGLINCSNP 296 (450)
Q Consensus 220 ~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~---p~~~p~~~d~~~~~~~~~~~~~~~~~ 296 (450)
....|||+|.++.... ......|..|.+++..... ...++.+. +...+..+++++.+.++++..
T Consensus 290 ~~~~ail~y~~~~~~~------~p~~~~p~~p~~~~~~~~~--~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~----- 356 (552)
T 1aoz_A 290 PPGLTLLNYLPNSVSK------LPTSPPPQTPAWDDFDRSK--NFTYRITAAMGSPKPPVKFNRRIFLLNTQNVI----- 356 (552)
T ss_dssp CCEEEEEEETTSCTTS------CCSSCCCCCCCTTCHHHHH--HHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEE-----
T ss_pred ccEEEEEEECCCCCCC------CCCCCCCCCCccccccccc--cccccccccCCCCCCCCCCcEEEEEEEeeccC-----
Confidence 5789999998765311 0111234445455443221 12233332 233455678888887765431
Q ss_pred CCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCC-cccccCCCCCCCCcCCCCCceeEEeecC
Q 013075 297 NSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPP-IIFDYTGNVSRGLWQPRKRTKLYKLKFG 375 (450)
Q Consensus 297 ~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~p~~~~~~~~~~~~~~~~~g 375 (450)
+ ....|+|||++|..|.. |+|.+.+.+++|.+..+++..++ ..|+... +..+...+.+++++.++.|
T Consensus 357 --------~-~~~~w~iNg~s~~~p~~-P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~t~~~~~~~g 424 (552)
T 1aoz_A 357 --------N-GYVKWAINDVSLALPPT-PYLGAMKYNLLHAFDQNPPPEVFPEDYDIDT--PPTNEKTRIGNGVYQFKIG 424 (552)
T ss_dssp --------T-TEEEEEETTEEECCCSS-CHHHHHHTTCTTSSCCSCCCSCCCTTCCTTS--CCCCTTCEEECCCEEECTT
T ss_pred --------C-CeEEEEECCCccCCCCC-CHHHHHhhcCccccccCCCcccccccccccc--ccccccccccceEEEecCC
Confidence 2 26789999999998877 67777777777877766654332 1233321 2222334567788999999
Q ss_pred CEEEEEEEeCCCCC---CCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEccCCC
Q 013075 376 SRVQIVFQDTSIVS---VEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 376 ~~v~ivi~N~~~~~---~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG 450 (450)
++|||+|+|.+.+. .+.||||||||+||||++|.|.|++ .+...+|+.+|+|||||.||++||++|||+|||||
T Consensus 425 ~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG 501 (552)
T 1aoz_A 425 EVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPG 501 (552)
T ss_dssp CEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCE
T ss_pred CEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCe
Confidence 99999999976543 5679999999999999999999987 44567899999999999999999999999999998
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=6.9e-79 Score=625.69 Aligned_cols=377 Identities=29% Similarity=0.480 Sum_probs=287.9
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChhhhhc-ceeEEEEEecCCCC-CCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRA-TVYGALIVYPRMGS-PYPFPMP 78 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~-~~~~~~~ 78 (450)
|||||||++|..++||||++++|||||+||++|+|+|++++++||||||||...|++ ||+|+|||+++.+. ..+++..
T Consensus 61 tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d 140 (499)
T 3pxl_A 61 TSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140 (499)
T ss_dssp BCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBC
T ss_pred eEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCC
Confidence 689999999999999999999999999999999999998778999999999999995 99999999987642 1123233
Q ss_pred CCceeEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEE
Q 013075 79 KREIPILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFG 158 (450)
Q Consensus 79 ~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~ 158 (450)
++|++|+|+||+++.... .+..+.+++++||||+.. +..|.....+.++|++|++|||||||+|....+.|+
T Consensus 141 ~~~~~l~l~Dw~~~~~~~-------~~~~p~~~d~~liNG~~~-~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~ 212 (499)
T 3pxl_A 141 NDDTVITLADWYHTAAKL-------GPRFPGGADATLINGKGR-APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFS 212 (499)
T ss_dssp SGGGEEEEEEECSSCTTT-------SCSSCSSCSEEEETTBCC-CTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEE
T ss_pred CceEEEEEEcccCCcccc-------ccCCCCCCcEEEECCCCc-CCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEE
Confidence 567899999999987532 233455889999999953 333344567899999999999999999999999999
Q ss_pred EeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCC
Q 013075 159 VANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKG 238 (450)
Q Consensus 159 i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~ 238 (450)
|+||+|+|||+||.+++|+.++.|.|++||||||+|++++++|+|||++.....+. .+......|||+|.+++..
T Consensus 213 i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~---- 287 (499)
T 3pxl_A 213 IDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNV-GFDGGINSAILRYDGAPAV---- 287 (499)
T ss_dssp ETTBCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSS----
T ss_pred ECCCeEEEEEECCcccCceEeeeEEECCCcEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEeCCCCCC----
Confidence 99999999999999999999999999999999999999987899999998654332 2223345899999876431
Q ss_pred CCCCCCCcCCCCCCCCCccchhhhhhcccccccCC-----CCcccceeEEEEeccceeccCCCCCCCccCCCCCeeeeee
Q 013075 239 KSRSSAPIFPILPGFNDTATATAFTARIKSLHQVQ-----VPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASI 313 (450)
Q Consensus 239 ~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~-----~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 313 (450)
.+ ..+....... .....|+++.+.. .+..+|+++.+.+++ ++ ..|+|
T Consensus 288 ----~p----~~~~~~~~~~--~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~----------------~~--~~w~i 339 (499)
T 3pxl_A 288 ----EP----TTNQTTSVKP--LNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNF----------------NG--SNFFI 339 (499)
T ss_dssp ----CC----CCCCCCCSSB--CCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEE----------------CS--SCEEE
T ss_pred ----CC----CCCCCCCCcc--cccccccccccccCCCcccCCCCcEEEEEEEEe----------------cC--cEEEE
Confidence 10 0000011100 1123455554322 223567776655443 22 27899
Q ss_pred ccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCC
Q 013075 314 NNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDH 393 (450)
Q Consensus 314 N~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~H 393 (450)
||++|..|+.|.|++... +..... .......++.++.|++|||+|+|.+....+.|
T Consensus 340 Ng~s~~~~~~P~L~~~~~----g~~~~~--------------------~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~H 395 (499)
T 3pxl_A 340 NGASFVPPTVPVLLQILS----GAQTAQ--------------------DLLPSGSVYVLPSNASIEISFPATAAAPGAPH 395 (499)
T ss_dssp TTBCCCCCSSCHHHHHHT----TCCSTT--------------------TSSSTTSEEEECTTCEEEEEEECCTTSCSCSC
T ss_pred cCEecCCCCCchhhhhhc----CCcccc--------------------ccCCCceeEEecCCCEEEEEEecCcccCCCCc
Confidence 999999888866666532 211100 00122458899999999999995432456789
Q ss_pred CcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCccceEEeCC---CCEEEEEEEccCCC
Q 013075 394 PMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPP---GGWVAVRFVAENPG 450 (450)
Q Consensus 394 P~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~---~g~~viRf~adNPG 450 (450)
|||||||+|+||+.+ | ...+|+.+|+||||+.||+ ++|++|||+|||||
T Consensus 396 P~HLHGh~F~Vl~~~-g-------~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG 447 (499)
T 3pxl_A 396 PFHLHGHTFAVVRSA-G-------STVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPG 447 (499)
T ss_dssp EEEETTCCEEEEECT-T-------CCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCE
T ss_pred cceecCCcEEEEecc-C-------CcccccCCCCccceEEcCCcCCCcEEEEEEEcCCCc
Confidence 999999999999864 2 2357889999999999997 99999999999998
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=1.9e-78 Score=622.55 Aligned_cols=376 Identities=25% Similarity=0.432 Sum_probs=286.1
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChhhhhc-ceeEEEEEecCCCCC-CCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRA-TVYGALIVYPRMGSP-YPFPMP 78 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~-~~~~~~ 78 (450)
|||||||++|.+++||||+|++|||||+||++|+|+|++++++||||||||...|++ ||+|+|||+++.+.. .+++..
T Consensus 62 tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d 141 (495)
T 3t6v_A 62 TSIHWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVD 141 (495)
T ss_dssp BCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBC
T ss_pred eEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCC
Confidence 689999999999999999999999999999999999998779999999999999995 999999999876421 223333
Q ss_pred CCceeEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCC--CCceeeEEeeCCCEEEEEEEecCCCceEE
Q 013075 79 KREIPILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCS--SKETVRFPVEAGETILLRIINSAMNQEHF 156 (450)
Q Consensus 79 ~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~--~~~~~~~~v~~G~~~rlRliN~~~~~~~~ 156 (450)
++|++|+|+||+++...++ .+..+.++|++||||+.. +.|. ....+.++|++|++|||||||+|+...+.
T Consensus 142 ~~e~~l~l~Dw~~~~~~~~------~~~~p~~~d~~liNG~g~--~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~ 213 (495)
T 3t6v_A 142 DDTTIITLADWYHVLAKEM------GAGGAITADSTLIDGLGR--THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYD 213 (495)
T ss_dssp SGGGEEEEEEECSSCGGGS------CSSSCCCCSEEEETTBCC--BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEE
T ss_pred CceeEEEEecccCCchhhh------ccCCCCCCcEEEECCcCc--CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEE
Confidence 5678999999999876432 233445889999999953 3343 24568999999999999999999999999
Q ss_pred EEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccCCCCCC
Q 013075 157 FGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGK 236 (450)
Q Consensus 157 ~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~ 236 (450)
|+|+||+|+|||+||.+++|+.++.|.|++||||||+|++++++|+|||++.....+. .+.+....|||+|.++....
T Consensus 214 ~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~~- 291 (495)
T 3t6v_A 214 FSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGE-GFDGGINSAILRYDGATTAD- 291 (495)
T ss_dssp EEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSSC-
T ss_pred EEECCCeEEEEEeCCcccCCEEeeeEEEcCceEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEECCCCCCC-
Confidence 9999999999999999999999999999999999999999987899999998754332 22233458999998754311
Q ss_pred CCCCCCCCCcCCCCCCCCCccchhhhhhcccccccCC-----CCcccceeEEEEeccceeccCCCCCCCccCCCCCeeee
Q 013075 237 KGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQVQ-----VPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAA 311 (450)
Q Consensus 237 ~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~-----~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (450)
+... .+.. .... .....|+++.+.. .+..+|+++.+.+++ ++ ..|
T Consensus 292 -----p~~~-~~~~----~~~~--~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~----------------~~--~~w 341 (495)
T 3t6v_A 292 -----PVTV-ASTV----HTKC--LIETDLHPLSRNGVPGNPHQGGADCNLNLSLGF----------------AC--GNF 341 (495)
T ss_dssp -----CCCC-CCSS----CSSB--CCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEE----------------ET--TEE
T ss_pred -----CCCC-CCCC----Cccc--cccccccccccccCCCccCCCCCcEEEEEEEEe----------------cC--cEE
Confidence 0000 0000 0000 1123455554322 223467766655443 22 278
Q ss_pred eeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCC
Q 013075 312 SINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVE 391 (450)
Q Consensus 312 ~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~ 391 (450)
+|||++|..|+.|.|++... +.+... .......++.++.|++|||+|+|. ...+
T Consensus 342 ~iNg~s~~~~~~P~L~~~~~----g~~~~~--------------------~~~~~~~v~~~~~g~~V~ivl~~n--~~~~ 395 (495)
T 3t6v_A 342 VINGVSFTPPTVPVLLQICS----GANTAA--------------------DLLPSGSVISLPSNSTIEIALPAG--AAGG 395 (495)
T ss_dssp EETTBCCCCCSSCHHHHHHT----TCCSST--------------------TSSSTTSEEEECTTCEEEEEEECC--SSSC
T ss_pred EEcCEecCCCCCcchhhhhc----CCcCcc--------------------cccCCcceEEecCCCEEEEEEccC--CCCC
Confidence 99999999888866666532 211100 001224588999999999999842 2467
Q ss_pred CCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCccceEEeCC-CCEEEEEEEccCCC
Q 013075 392 DHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPP-GGWVAVRFVAENPG 450 (450)
Q Consensus 392 ~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~-~g~~viRf~adNPG 450 (450)
.||||||||+|+||+++ | ...+|+.+|+|||||.|++ ++|++|||+|||||
T Consensus 396 ~HP~HLHGh~F~vl~~~-g-------~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG 447 (495)
T 3t6v_A 396 PHPFHLHGHDFAVSESA-S-------NSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPG 447 (495)
T ss_dssp CCEEEETTCCEEEEECT-T-------CCCCCSSSCCEESEEECCSTTCEEEEEEECCSCE
T ss_pred CcceeecCCcEEEEecC-C-------CCCcccCCCCCccEEEcCCCCcEEEEEEEcCCCe
Confidence 89999999999999864 2 2357889999999999997 89999999999998
No 5
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-78 Score=625.34 Aligned_cols=382 Identities=25% Similarity=0.391 Sum_probs=295.1
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChhhhhc-ceeEEEEEecCCCCCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRA-TVYGALIVYPRMGSPYPFPMPK 79 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~~ 79 (450)
|+|||||++|.+++||||+|++|||||+||++|+|+|++.+++||||||||.+.|++ ||+|+|||+++.+ |+ .+|
T Consensus 57 tsiHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d 132 (534)
T 1zpu_A 57 TSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYD 132 (534)
T ss_dssp BCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCS
T ss_pred eeEEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCc
Confidence 689999999999999999999999999999999999998559999999999999996 9999999999864 33 568
Q ss_pred CceeEEEeeeecCChHHHHHHhhhc---CCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEE
Q 013075 80 REIPILIGEWWDRDPMDVLRQALFT---GGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHF 156 (450)
Q Consensus 80 ~e~~l~l~d~~~~~~~~~~~~~~~~---~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~ 156 (450)
+|++|+|+||+++...++....... ......++.+||||+.. +.++|++||+|||||||+|+.+.+.
T Consensus 133 ~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~d~~liNG~~~----------~~~~v~~g~~~RlRliNa~~~~~~~ 202 (534)
T 1zpu_A 133 EELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMN----------LTWEVQPDTTYLLRIVNVGGFVSQY 202 (534)
T ss_dssp EEEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCCSEEEETTBSS----------CEEECCSSCEEEEEEEECCSSCCEE
T ss_pred ceEEEEeeccccCCHHHHHHHHhccccCCCCCCCCceEEECCCCc----------eEEEEECCCEEEEEEEeccCCceEE
Confidence 9999999999999998877654321 12334789999999864 8999999999999999999999999
Q ss_pred EEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCC-CceeEEEeeeeccccc---cCCCccEEEEEEeccCC
Q 013075 157 FGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQP-PARYYMAAHAYNTANA---AFDNTTTTAILEYKSAP 232 (450)
Q Consensus 157 ~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~-~g~y~l~~~~~~~~~~---~~~~~~~~ail~y~~~~ 232 (450)
|+|+||+|+|||+||.+++|..++.|.|++||||||+|++++. .++|||++.....+.. ........++|+|.++.
T Consensus 203 ~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~ 282 (534)
T 1zpu_A 203 FWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTA 282 (534)
T ss_dssp EEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTS
T ss_pred EEEcCCeeEEEeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCC
Confidence 9999999999999999999999999999999999999999864 4799999986543211 12235678999998754
Q ss_pred CCCCCCCCCCCCCcCCCCCC-CCCccchhhhhhcccccccCCCCcccceeEEEEeccceeccCCCCCCCccCCCCCeeee
Q 013075 233 FNGKKGKSRSSAPIFPILPG-FNDTATATAFTARIKSLHQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAA 311 (450)
Q Consensus 233 ~~~~~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (450)
.. +.+...+..+. .. ...|+++.+..++..+++++.+.+.+... .++ ...|
T Consensus 283 ~~-------p~~~~~~~~~~~~~--------~~~l~p~~~~~~~~~~~~~~~l~~~~~~~------------~~~-~~~~ 334 (534)
T 1zpu_A 283 AL-------PTQNYVDSIDNFLD--------DFYLQPYEKEAIYGEPDHVITVDVVMDNL------------KNG-VNYA 334 (534)
T ss_dssp CB-------CCCCCCSCSSCSCC--------GGGCCBSSCCCCCCSCSEEEEEEEEEEEC------------TTS-CEEE
T ss_pred CC-------CCCCcccccccccc--------cccceeCCCCCCCCCCCeEEEEEEEeecc------------CCc-eeEE
Confidence 31 11111111111 11 12344544444556778888887765321 022 3568
Q ss_pred eeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCC
Q 013075 312 SINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVE 391 (450)
Q Consensus 312 ~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~ 391 (450)
+|||++|..|+.|.|++.... +.+..+ +.. .+.+++++.++.|++|+|+|+|.+ .+
T Consensus 335 ~iNg~s~~~~~~P~L~~~~~~---~~~~~~-----~~~-------------~~~~~~~~~~~~g~~v~ivi~N~~---~~ 390 (534)
T 1zpu_A 335 FFNNITYTAPKVPTLMTVLSS---GDQANN-----SEI-------------YGSNTHTFILEKDEIVEIVLNNQD---TG 390 (534)
T ss_dssp EETTBCCCCCSSCHHHHHTTS---GGGTTC-----GGG-------------GCSSSCEEEECTTCEEEEEEEECS---SS
T ss_pred EECCCcccCCCCCceeeeccc---CcccCC-----Ccc-------------cCCCceEEEeCCCCEEEEEEeCCC---CC
Confidence 899999999988777665321 111100 111 123466899999999999999964 56
Q ss_pred CCCcccCCCceEEEEecCC----------CCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEccCCC
Q 013075 392 DHPMHLHGHEFYVVGSGLG----------NFNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 392 ~HP~HLHGh~F~Vl~~g~G----------~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG 450 (450)
.||||||||+||||+++.+ .|++.. .. ....+|+|||||.|+++||++|||+|||||
T Consensus 391 ~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~-~~-~~~~~p~~RDTv~V~pgg~v~IrF~aDNPG 457 (534)
T 1zpu_A 391 THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDN-HP-AFPEYPMRRDTLYVRPQSNFVIRFKADNPG 457 (534)
T ss_dssp CEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTB-CC-CCCSSCEEESEEEECTTCEEEEEEECCSCE
T ss_pred CCCeEecCCceEEEeecCCccccccCcccccCccc-cc-cccCCCCeeeEEEeCCCCEEEEEEEeCCCe
Confidence 8999999999999999864 444321 11 235689999999999999999999999998
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=3.1e-76 Score=612.24 Aligned_cols=376 Identities=27% Similarity=0.459 Sum_probs=282.3
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChhhhhc-ceeEEEEEecCCCC-CCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRA-TVYGALIVYPRMGS-PYPFPMP 78 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~-~~~~~~~ 78 (450)
|||||||++|.+++||||+|++|||+|+||++|+|+|++++++||||||||.+.|++ ||+|+|||+++.+. +.+++..
T Consensus 82 tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d 161 (521)
T 1v10_A 82 TSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVD 161 (521)
T ss_dssp BCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBC
T ss_pred ceEecCCeeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCC
Confidence 689999999999999999999999999999999999997789999999999999996 99999999987642 1223323
Q ss_pred CCceeEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCC--CCceeeEEeeCCCEEEEEEEecCCCceEE
Q 013075 79 KREIPILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCS--SKETVRFPVEAGETILLRIINSAMNQEHF 156 (450)
Q Consensus 79 ~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~--~~~~~~~~v~~G~~~rlRliN~~~~~~~~ 156 (450)
++|++|+|+||+++...++... .+.....+|.++|||+.. +.|. ....+.++|++|++|||||||+|+.+.+.
T Consensus 162 ~~e~~l~l~D~~~~~~~~~~~~---~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~ 236 (521)
T 1v10_A 162 DASTVITIADWYHSLSTVLFPN---PNKAPPAPDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYA 236 (521)
T ss_dssp SGGGEEEEEEECSSCCC----------CCCSCCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEE
T ss_pred CceeEEEEcccccCCHHHHhhc---cCCCCCCCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEE
Confidence 4799999999999987766421 122345689999999974 5564 23458999999999999999999999999
Q ss_pred EEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccCCCCCC
Q 013075 157 FGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGK 236 (450)
Q Consensus 157 ~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~ 236 (450)
|+|+||+|+|||+||.+++|+.++.|.|+|||||||+|++++.+|+|||++.....+. .+......++|+|.+.....
T Consensus 237 ~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~-~~~~~~~~ail~y~~~~~~~- 314 (521)
T 1v10_A 237 FSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRN-GFTGGINSAIFRYQGAAVAE- 314 (521)
T ss_dssp EEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTCCSCC-
T ss_pred EEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccc-cCCCCceeEEEEECCCCCCC-
Confidence 9999999999999999999999999999999999999999987799999998654322 12222346999998765411
Q ss_pred CCCCCCCCCcCCCCCCCCCccchhhhhhcccccccCCCCc-----ccceeEEEEeccceeccCCCCCCCccCCCCCeeee
Q 013075 237 KGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQVQVPT-----VIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAA 311 (450)
Q Consensus 237 ~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~-----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (450)
+ ..+.. ...+. ....|+++.+...|. ..+.++.+.+++ ++....|
T Consensus 315 -------p----~~~~~-~~~~~--~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~----------------~~~~~~~ 364 (521)
T 1v10_A 315 -------P----TTSQN-SGTAL--NEANLIPLINPGAPGNPVPGGADINLNLRIGR----------------NATTADF 364 (521)
T ss_dssp -------C----CCCCC-CSCBC--CGGGCCBSSCCCCSSCSSTTCSSEEEECCEEC----------------CSSSSCC
T ss_pred -------C----CCCCC-ccccc--chhhcccCCcccCCCcccCCcceEEEEEEEec----------------CCceeEE
Confidence 0 00000 00000 012344443322222 334444332221 2223579
Q ss_pred eeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCC
Q 013075 312 SINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVE 391 (450)
Q Consensus 312 ~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~ 391 (450)
+|||++|..++.|.|++. ..+... ..+ .+.+.+++.++.|++|||+++| .+
T Consensus 365 ~iNg~~~~~~~~P~l~~~-~~g~~~--~~~---------------------~~~~~~~~~v~~g~~vei~l~N-----~~ 415 (521)
T 1v10_A 365 TINGAPFIPPTVPVLLQI-LSGVTN--PND---------------------LLPGGAVISLPANQVIEISIPG-----GG 415 (521)
T ss_dssp EESSCCCCCCSSCHHHHH-HHTCCC--GGG---------------------SSSTTTEEEECTTCEEEEEEEC-----CB
T ss_pred EECCCcccCCCCchhhhh-hcCCcc--ccc---------------------CCCCceEEEecCCCEEEEEEcC-----CC
Confidence 999999998888555443 322100 001 1234568999999999999999 35
Q ss_pred CCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCccceEEe-CCCCEEEEEEEccCCC
Q 013075 392 DHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGT-PPGGWVAVRFVAENPG 450 (450)
Q Consensus 392 ~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~v-p~~g~~viRf~adNPG 450 (450)
.||||||||+||||+++.+. .+|+.+|+|||||.| |++||++|||+|||||
T Consensus 416 ~HP~HLHGh~F~Vl~~~~~~--------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG 467 (521)
T 1v10_A 416 NHPFHLHGHNFDVVRTPGSS--------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPG 467 (521)
T ss_dssp SCEEEESSCCEEEEECTTCS--------CCCCSSCCEESEEECCBSSCEEEEEEECCSCE
T ss_pred CCCEEEccceEEEEecCCCC--------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCe
Confidence 89999999999999997542 367889999999999 8999999999999998
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=7.9e-76 Score=607.13 Aligned_cols=374 Identities=29% Similarity=0.523 Sum_probs=282.5
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChhhhhc-ceeEEEEEecCCCC-CCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRA-TVYGALIVYPRMGS-PYPFPMP 78 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~-~~~~~~~ 78 (450)
|||||||++|.+++||||+|++|||+|+||++|+|+|++++++||||||||.+.|++ ||+|+|||+++.+. +.++...
T Consensus 61 tsiHwHG~~~~~~~~~DGv~~vtq~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d 140 (503)
T 1hfu_A 61 TSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDED 140 (503)
T ss_dssp BCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBC
T ss_pred ccEeccceeccCCCccCCCcccccCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCC
Confidence 689999999999999999999999999999999999997689999999999999996 99999999987642 1223223
Q ss_pred CCceeEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCC-CceeeEEeeCCCEEEEEEEecCCCceEEE
Q 013075 79 KREIPILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSS-KETVRFPVEAGETILLRIINSAMNQEHFF 157 (450)
Q Consensus 79 ~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~-~~~~~~~v~~G~~~rlRliN~~~~~~~~~ 157 (450)
++|++|+|+||+++...++. + ...++.+||||+.. +.|.. ...+.++|++|++|||||||+|+.+.+.|
T Consensus 141 ~~e~~l~l~Dw~~~~~~~~~------~--~~~~d~~liNG~~~--~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~ 210 (503)
T 1hfu_A 141 DENTIITLADWYHIPAPSIQ------G--AAQPDATLINGKGR--YVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQF 210 (503)
T ss_dssp STTSEEEEEEECSSCGGGCC-----------CCSEEEETTBCC--BTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEE
T ss_pred CceEEEEEcccccCChHHhc------C--CCCCCEEEECcccc--cCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEE
Confidence 46999999999998876531 1 14689999999963 66753 34589999999999999999999999999
Q ss_pred EEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccc---cCCCccEEEEEEeccCCCC
Q 013075 158 GVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANA---AFDNTTTTAILEYKSAPFN 234 (450)
Q Consensus 158 ~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~---~~~~~~~~ail~y~~~~~~ 234 (450)
+|+||+|+|||+||.+++|+.++.|.|++||||||+|++++.+|+|||++.....+.. .+......+||+|.++...
T Consensus 211 ~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~ 290 (503)
T 1hfu_A 211 SIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANA 290 (503)
T ss_dssp EETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSS
T ss_pred EEcCceEEEEeccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCC
Confidence 9999999999999999999999999999999999999999877999999986533211 1222234799999876431
Q ss_pred CCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccccCCCCc-----ccceeEEEEeccceeccCCCCCCCccCCCCCee
Q 013075 235 GKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQVQVPT-----VIDENLFFTVGLGLINCSNPNSPRCQGPNGTRF 309 (450)
Q Consensus 235 ~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~-----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (450)
. +.....|.....+ ...|+++.+...|. ..+.++.+ ++.. ++.
T Consensus 291 ~------p~~~~~~~~~~l~--------~~~l~p~~~~~~p~~~~~~~~~~~~~l--~~~~--------------~~~-- 338 (503)
T 1hfu_A 291 D------PTTSANPNPAQLN--------EADLHALIDPAAPGIPTPGAADVNLRF--QLGF--------------SGG-- 338 (503)
T ss_dssp C------CCCCCCSSCCBCC--------GGGCBBSSSCSCSSCSSTTCSSEEEEC--CEEE--------------ETT--
T ss_pred C------CCCCCCCccCCCc--------cccccccCccCCCCcccCCcceEEEEE--Eeec--------------cCc--
Confidence 1 1111111111111 12344443322222 33444433 3211 222
Q ss_pred eeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCC
Q 013075 310 AASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVS 389 (450)
Q Consensus 310 ~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~ 389 (450)
.|+|||++|..++.|.|++. .. +.+... ..+.+.+++.++.|++|||+++|.. .
T Consensus 339 ~~~iNg~~~~~~~~P~l~~~-~~---g~~~~~--------------------~~~~~~~~~~v~~g~~vei~l~~n~--~ 392 (503)
T 1hfu_A 339 RFTINGTAYESPSVPTLLQI-MS---GAQSAN--------------------DLLPAGSVYELPRNQVVELVVPAGV--L 392 (503)
T ss_dssp EEEETTBCCCCCSSCHHHHH-HT---TCCSGG--------------------GSSSTTSEEEECSSCEEEEEEECCS--T
T ss_pred eEEECCCccCCCCCcchhhh-hc---CCcccc--------------------cCCCCceEEEccCCCEEEEEEECCC--C
Confidence 78999999998888555443 32 111100 0123466899999999999999643 3
Q ss_pred CCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCccceEEe-CCCCEEEEEEEccCCC
Q 013075 390 VEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGT-PPGGWVAVRFVAENPG 450 (450)
Q Consensus 390 ~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~v-p~~g~~viRf~adNPG 450 (450)
.+.||||||||+|+||+++.+. .+|+.+|+|||||.| |++||++|||+|||||
T Consensus 393 ~~~HP~HLHGh~F~Vl~~~~~~--------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG 446 (503)
T 1hfu_A 393 GGPHPFHLHGHAFSVVRSAGSS--------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPG 446 (503)
T ss_dssp TCCCEEEETTCCEEEEECTTCC--------CCCCSSBCEESEEECCSTTCEEEEEEECCSCE
T ss_pred CCCCCEEEecceEEEEecCCCC--------ccccCCCCeeeeEEecCCCceEEEEEEcCCCe
Confidence 5789999999999999997542 357789999999999 9999999999999998
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=2.8e-75 Score=609.39 Aligned_cols=386 Identities=25% Similarity=0.424 Sum_probs=288.2
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCC-CCeEEEEEEeCCceeeeeeccChhhhhc-ceeEEEEEecCCCCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQP-GRSYTYRFTIEDQEGTLWWHAHSRWLRA-TVYGALIVYPRMGSPYPFPMP 78 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~p-g~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~ 78 (450)
|||||||++|.+++||||+|++|||||+| |++|+|+|++ .++||||||||...|++ ||+|+|||+++... .+
T Consensus 90 tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~ 163 (559)
T 2q9o_A 90 TSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PY 163 (559)
T ss_dssp BCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CC
T ss_pred ceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CC
Confidence 68999999999999999999999999999 9999999997 78999999999999986 99999999998643 35
Q ss_pred CCce-eEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCC-CceeeEEeeCCCEEEEEEEecCCCceEE
Q 013075 79 KREI-PILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSS-KETVRFPVEAGETILLRIINSAMNQEHF 156 (450)
Q Consensus 79 ~~e~-~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~-~~~~~~~v~~G~~~rlRliN~~~~~~~~ 156 (450)
|+|. +|+|+||+++...+++.... +..+..+++++|||+.. ..|.. +..+.++|++|++|||||||+|+...+.
T Consensus 164 d~d~~~l~l~Dw~~~~~~~~~~~~~--~~~~~~~d~~liNG~~~--~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~ 239 (559)
T 2q9o_A 164 DIDLGVFPITDYYYRAADDLVHFTQ--NNAPPFSDNVLINGTAV--NPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQ 239 (559)
T ss_dssp SEEEEEEEEEEECSSCHHHHHHHHT--TSCCCCBSEEEETTBCB--CTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEE
T ss_pred cccceEEEEeccccCCHHHHhhhhh--cCCCCccceeEECCccc--cCcCCCCCceEEEEcCCCEEEEEEEecCCCceEE
Confidence 7777 99999999999888764332 22345789999999974 34642 3467999999999999999999999999
Q ss_pred EEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeee--eccccccCCCccEEEEEEeccCCCC
Q 013075 157 FGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHA--YNTANAAFDNTTTTAILEYKSAPFN 234 (450)
Q Consensus 157 ~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~--~~~~~~~~~~~~~~ail~y~~~~~~ 234 (450)
|+|+||+|+|||+||.+++|+.++.|.|+|||||||+|++++.+|+|||++.. ...|. ........|||+|.++...
T Consensus 240 ~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~-~~~~~~~~ail~y~~~~~~ 318 (559)
T 2q9o_A 240 VSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACG-GSLNPHPAAIFHYAGAPGG 318 (559)
T ss_dssp EEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTC-CBSSSCCEEEEEETTSCCS
T ss_pred EEECCCceEEEecCCcccCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccC-CCCCCceeEEEEECCCCCC
Confidence 99999999999999999999999999999999999999999878999999987 33332 1233456999999865431
Q ss_pred CCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccccCCCCc-----ccceeEEEEeccceeccCCCCCCCccCCCCCee
Q 013075 235 GKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQVQVPT-----VIDENLFFTVGLGLINCSNPNSPRCQGPNGTRF 309 (450)
Q Consensus 235 ~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~-----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (450)
. +..... +. .+..+.. ...|.++.+..+|. ..+.++.+..... .+...
T Consensus 319 ~------P~~~~~---~~-~~~~~~~--~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~---------------~~~~~ 371 (559)
T 2q9o_A 319 L------PTDEGT---PP-VDHQCLD--TLDVRPVVPRSVPVNSFVKRPDNTLPVALDLT---------------GTPLF 371 (559)
T ss_dssp C------CCCCCC---CC-CCCTTCC--CSCCCBSSCCBCCCTTCCCCGGGEEEEEEECS---------------SSSSC
T ss_pred C------CCCCCC---cC-CCccccc--ccccccCCCCCCCCcccccceeEEEEEEeecC---------------CCceE
Confidence 0 111000 00 1111110 02233333222221 1233443332210 22357
Q ss_pred eeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCCCCCCCcCCCCCceeEEeec-CCEEEEEEEeCCC-
Q 013075 310 AASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLKF-GSRVQIVFQDTSI- 387 (450)
Q Consensus 310 ~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~-g~~v~ivi~N~~~- 387 (450)
.|+|||++|..+...|+|.+...+. +++ ..+.+++.++. +++++|+++|...
T Consensus 372 ~~~iNg~s~~~~~~~P~L~~~~~g~-----~~~---------------------~~~~~~~~~~~~~~v~~~vi~n~~~~ 425 (559)
T 2q9o_A 372 VWKVNGSDINVDWGKPIIDYILTGN-----TSY---------------------PVSDNIVQVDAVDQWTYWLIENDPEG 425 (559)
T ss_dssp EEEETTBCCCCCTTSCHHHHHHHTC-----CCC---------------------CGGGCEEEECCSSCEEEEEEEECTTS
T ss_pred EEEECCEecccCCCCCcHhHhhcCC-----ccC---------------------CCCceEEEcCCCCEEEEEEEeCCCcc
Confidence 8999999998653335555444321 111 11345677765 5788888888531
Q ss_pred CCCCCCCcccCCCceEEEEecC---------CCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEccCCC
Q 013075 388 VSVEDHPMHLHGHEFYVVGSGL---------GNFNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 388 ~~~~~HP~HLHGh~F~Vl~~g~---------G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG 450 (450)
...+.||||||||+||||+++. |.|++.++...+|+.+|+|||||.||++||++|||+|||||
T Consensus 426 ~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG 497 (559)
T 2q9o_A 426 PFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPG 497 (559)
T ss_dssp SCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCE
T ss_pred ccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCe
Confidence 0157899999999999999987 77765433456889999999999999999999999999998
No 9
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=2e-66 Score=529.53 Aligned_cols=326 Identities=16% Similarity=0.226 Sum_probs=244.0
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccCh----hhhhc-ceeEEEEEecCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHS----RWLRA-TVYGALIVYPRMGSPYPF 75 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~----~~~~~-Gl~G~liV~~~~~~~~~~ 75 (450)
|||||||+++.++ |||+| ||+|+||++|+|+|++.+++||||||||. ..|++ ||+|+|||+++.+...++
T Consensus 72 tsiHwHG~~~~~~--~DG~~---~~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~ 146 (451)
T 2uxt_A 72 VSMTVAGLQVPGP--LMGGP---ARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPI 146 (451)
T ss_dssp BCEEEETCCCCGG--GSCSG---GGCBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSS
T ss_pred ccEEECCccCCCC--CCCCC---cCcCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCC
Confidence 6899999999887 99998 99999999999999985569999999998 55764 999999999886533333
Q ss_pred CC--CCCceeEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCc
Q 013075 76 PM--PKREIPILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQ 153 (450)
Q Consensus 76 ~~--~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~ 153 (450)
+. .++|++|+|+||+++...++.. ...+.....++.++|||+.. +.++|++| +|||||||+|+.+
T Consensus 147 p~~y~~~e~~l~l~D~~~~~~~~~~~--~~~~~~~~~~d~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~ 213 (451)
T 2uxt_A 147 PNHYGVDDFPVIIQDKRLDNFGTPEY--NEPGSGGFVGDTLLVNGVQS----------PYVEVSRG-WVRLRLLNASNSR 213 (451)
T ss_dssp CCCBTTTEEEEEEEEEEECTTSCEEC--CCCSSSCCCCSEEEETTEES----------CEEEECSS-EEEEEEEECCSSC
T ss_pred CccCCCceEEEEEEeeecCCCCceec--ccccCCCCcCCEEEECCccc----------ceEEecCC-EEEEEEEccCCce
Confidence 32 4789999999999886554321 11222345789999999985 78999999 9999999999999
Q ss_pred eEEEEE-eCcceEEEEeCCCcc-CceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccc-------cCCCccEEE
Q 013075 154 EHFFGV-ANHKLTVVGVDTSYT-KPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANA-------AFDNTTTTA 224 (450)
Q Consensus 154 ~~~~~i-~gh~~~via~DG~~v-~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~-------~~~~~~~~a 224 (450)
.+.|+| +||+|+|||+||+++ +|..++.|.|+|||||||+|++++ ++.|+|++.....+.. ........+
T Consensus 214 ~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (451)
T 2uxt_A 214 RYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSN-GDEVSITCGEAASIVDRIRGFFEPSSILVSTL 292 (451)
T ss_dssp CEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTCEEEEEEECTT-CCCEEEEC----------------CCCCSCCE
T ss_pred eEEEEECCCCeEEEEEeCCCccCCceEeceEEECceeEEEEEEEeCC-CCEEEEEecCccccccccccccccCCCCCCcc
Confidence 999999 899999999999998 899999999999999999999995 5899999876443211 011234468
Q ss_pred EEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccccCCCCcccceeEEEEeccceeccCCCCCCCccCC
Q 013075 225 ILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGP 304 (450)
Q Consensus 225 il~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (450)
+++|....... .....+|. .|.++.+.+.+...++++.+
T Consensus 293 il~~~~~~~~~------~~~~~~p~---------------~L~~~~~~~~~~~~~~~~~l-------------------- 331 (451)
T 2uxt_A 293 VLTLRPTGLLP------LVTDSLPM---------------RLLPTEIMAGSPIRSRDISL-------------------- 331 (451)
T ss_dssp EEEEEECSCCC----------CCCS---------------CSSSSCCCCCCCSEEEEEEE--------------------
T ss_pred eEEEEecCCCc------CccccCcc---------------ccCCCCCCCCCCcceEEEEE--------------------
Confidence 88887654310 00001110 12222211111222233222
Q ss_pred CCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEe
Q 013075 305 NGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQD 384 (450)
Q Consensus 305 ~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N 384 (450)
.+ .|+|||++|..+.. .+.++.|++|+|+|+|
T Consensus 332 ~~---~~~iNg~~f~~~~~---------------------------------------------~~~~~~G~~~~~~l~N 363 (451)
T 2uxt_A 332 GD---DPGINGQLWDVNRI---------------------------------------------DVTAQQGTWERWTVRA 363 (451)
T ss_dssp CS---SSSBTTBCCCTTCC---------------------------------------------CEEEETTCEEEEEEEE
T ss_pred ee---EEEECCEeCCCCCC---------------------------------------------cEEcCCCCEEEEEEEC
Confidence 11 57899998863221 3678999999999999
Q ss_pred CCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEccCCC
Q 013075 385 TSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 385 ~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG 450 (450)
. +.||||||||+||||+++ |. .+++.+|.|||||.| +++++|||+|||||
T Consensus 364 ~-----~~HP~HLHGh~F~Vl~~~-G~--------~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg 413 (451)
T 2uxt_A 364 D-----EPQAFHIEGVMFQIRNVN-GA--------MPFPEDRGWKDTVWV--DGQVELLVYFGQPS 413 (451)
T ss_dssp E-----EEEEEEETTCEEEEEEET-TB--------CCCGGGSSCBSEEEE--EEEEEEEEECCSCC
T ss_pred C-----CCcCeEECCceEEEEeeC-Cc--------CCCcccCCCccEEEE--CCEEEEEEEeCCCC
Confidence 4 489999999999999985 21 245668999999999 89999999999997
No 10
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=2e-65 Score=521.48 Aligned_cols=323 Identities=22% Similarity=0.326 Sum_probs=246.6
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeC-CceeeeeeccChh----hhhc-ceeEEEEEecCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIE-DQEGTLWWHAHSR----WLRA-TVYGALIVYPRMGSPYP 74 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~-~~~Gt~wYH~H~~----~~~~-Gl~G~liV~~~~~~~~~ 74 (450)
|+|||||+++.+ ||||++ +.|+||++|+|+|+++ +++||||||||.+ .|++ ||+|+|||+++.+.. +
T Consensus 69 tsiHwHG~~~~~--~~DG~~----~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~ 141 (439)
T 2xu9_A 69 TNLHWHGLPISP--KVDDPF----LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-P 141 (439)
T ss_dssp BCCEEETCCCCT--TTSCTT----CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-H
T ss_pred cceEeCCCCCCc--cccCCc----ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-c
Confidence 689999999865 899986 3599999999999983 5899999999985 4664 999999999876421 1
Q ss_pred CCCCCCceeEEEeeeecCChH----HHHHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecC
Q 013075 75 FPMPKREIPILIGEWWDRDPM----DVLRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSA 150 (450)
Q Consensus 75 ~~~~~~e~~l~l~d~~~~~~~----~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~ 150 (450)
...+++|++|+|+||+++... .... . ..| ..++.++|||+.. +.++|++| +|||||||+|
T Consensus 142 ~~~~~~e~~l~l~D~~~~~~~~~~~~~~~-~-~~g---~~~~~~~iNG~~~----------p~l~v~~g-~~RlRliN~~ 205 (439)
T 2xu9_A 142 ELREAEEHLLVLKDLALQGGRPAPHTPMD-W-MNG---KEGDLVLVNGALR----------PTLVAQKA-TLRLRLLNAS 205 (439)
T ss_dssp HHHTSEEEEEEEEEECEETTEECCCCHHH-H-HHC---CCCSEEEETTEES----------CEEECSSS-EEEEEEEECC
T ss_pred cCCCCCcEEEEEEeeeeCCCCcCCCCccc-c-ccC---CCCCEEEECCccC----------CcEEecCC-eEEEEEEecC
Confidence 113578999999999987531 0000 0 011 3568999999975 89999999 9999999999
Q ss_pred CCceEEEEEeCcceEEEEeCCCcc-CceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeecccccc-------------
Q 013075 151 MNQEHFFGVANHKLTVVGVDTSYT-KPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANAA------------- 216 (450)
Q Consensus 151 ~~~~~~~~i~gh~~~via~DG~~v-~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~------------- 216 (450)
+.+.+.|+|+||+|+|||+||+++ +|+.++.|.|+|||||||+|++++ +|+|+|++.....+...
T Consensus 206 ~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 284 (439)
T 2xu9_A 206 NARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQ 284 (439)
T ss_dssp SSCCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEEC
T ss_pred CCceEEEEECCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccC
Confidence 999999999999999999999998 899999999999999999999997 79999999754332110
Q ss_pred -CCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccccCCCCcccceeEEEEeccceeccCC
Q 013075 217 -FDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQVQVPTVIDENLFFTVGLGLINCSN 295 (450)
Q Consensus 217 -~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~ 295 (450)
.......++|+|.+... . ..+|... .++.+...+ ..++++.+.+++
T Consensus 285 ~~~~~~~~~~l~~~~~~~--------~--~~~p~~l---------------~~~~~l~~~-~~~r~~~l~~~~------- 331 (439)
T 2xu9_A 285 GPSRPETLLYLIAPKNPK--------P--LPLPKAL---------------SPFPTLPAP-VVTRRLVLTEDM------- 331 (439)
T ss_dssp CSCCCEEEEEEEECSSCC--------C--CCCCSCC---------------CCCCCCCCC-SEEEEEEEEEEG-------
T ss_pred CCCCcceeEEEEecCCCc--------c--ccCcccC---------------CCcccCCCC-CcceEEEEEeec-------
Confidence 11235788999976543 1 0112110 011111111 223566555443
Q ss_pred CCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCCCCCCCcCCCCCceeEEeecC
Q 013075 296 PNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLKFG 375 (450)
Q Consensus 296 ~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g 375 (450)
. ...|+|||++|..+.. .+.++.|
T Consensus 332 ---------~--g~~~~iNg~~~~~~~~---------------------------------------------~~~~~~g 355 (439)
T 2xu9_A 332 ---------M--AARFFINGQVFDHRRV---------------------------------------------DLKGQAQ 355 (439)
T ss_dssp ---------G--GTEEEETTBCCCTTCC---------------------------------------------CEEECTT
T ss_pred ---------c--CceEeECCEECCCCCC---------------------------------------------ceecCCC
Confidence 1 1268899998863221 3678999
Q ss_pred CEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEccCCC
Q 013075 376 SRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 376 ~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG 450 (450)
++++|+|+|.+ .+.||||||||+||||+++.+.+ .+|+|||||.|++++|++|||+|||||
T Consensus 356 ~~~~~~~~N~~---~~~HP~HLHG~~F~Vl~~~g~~~-----------~~p~~rDTv~v~p~~~v~i~f~adnpG 416 (439)
T 2xu9_A 356 TVEVWEVENQG---DMDHPFHLHVHPFQVLSVGGRPF-----------PYRAWKDVVNLKAGEVARLLVPLREKG 416 (439)
T ss_dssp CEEEEEEEECS---SSCEEEEESSCCBEEEEETTEEC-----------SSCCCBSEEEECTTCEEEEEEECCSCE
T ss_pred CEEEEEEEcCC---CCCCCceeCCCcEEEEeeCCCCC-----------CCCCCeEEEEeCCCCEEEEEEEcCCCC
Confidence 99999999964 57899999999999999975432 379999999999999999999999998
No 11
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=3.4e-65 Score=519.72 Aligned_cols=334 Identities=17% Similarity=0.250 Sum_probs=247.4
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccC----hhhhhc-ceeEEEEEecCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAH----SRWLRA-TVYGALIVYPRMGSPYPF 75 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H----~~~~~~-Gl~G~liV~~~~~~~~~~ 75 (450)
|||||||+++.+ +|||+|+ |+|+||++|+|+|++.+++|||||||| ...|++ ||+|+|||+++.+. .++
T Consensus 60 tsiHwHG~~~~~--~~DG~~~---~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l 133 (448)
T 3aw5_A 60 TIVHWHGFDVNW--HNDAHPS---FAITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGF 133 (448)
T ss_dssp BCEEEETCCCCH--HHHTCGG---GCBCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTC
T ss_pred eeEEeCCccCCC--ccCCCCC---ccCCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCC
Confidence 689999999864 6999997 999999999999998558999999999 667875 99999999998764 333
Q ss_pred CCCC-CceeEEEeeeecCChHHHHHHh-hhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCc
Q 013075 76 PMPK-REIPILIGEWWDRDPMDVLRQA-LFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQ 153 (450)
Q Consensus 76 ~~~~-~e~~l~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~ 153 (450)
+ ++ +|++|+|+||+++. .++.... ...+....+++.++|||+.. +.++|++| +|||||||+|+.+
T Consensus 134 ~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~ 200 (448)
T 3aw5_A 134 K-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNGVKD----------AVFKLSGG-SYRLRLVNGSNAR 200 (448)
T ss_dssp C-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETTEET----------CEEEEEEE-EEEEEEEECSSSC
T ss_pred C-CCCceEEEEEEeeccCC-CcccccccccccccCccccEEEECCccc----------ceEEECCC-eEEEEEEcCCCcc
Confidence 3 34 89999999999876 4321100 00001124689999999985 89999999 9999999999999
Q ss_pred eEEEEE--eC---cceEEEEeCCCccC-ceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccc----------cC
Q 013075 154 EHFFGV--AN---HKLTVVGVDTSYTK-PFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANA----------AF 217 (450)
Q Consensus 154 ~~~~~i--~g---h~~~via~DG~~v~-P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~----------~~ 217 (450)
.+.|+| +| |+|+|||+||++++ |..++.|.|+|||||||+|++++ +.|||++.....+.. ..
T Consensus 201 ~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~y~l~~~~~~~~~g~~~~~~~~~~~~ 278 (448)
T 3aw5_A 201 LYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELGE--GVYLLKNTPFDPMHLEMGHGMQEALPE 278 (448)
T ss_dssp CEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECS--EEEEEEECCCCCCCCTTSSCCCCSSCT
T ss_pred eEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEECCC--CceEEEccccccccCccccccccccCC
Confidence 999999 99 99999999999997 99999999999999999999993 799999986543211 11
Q ss_pred CCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccccCCCCcccceeEEEEeccceeccCCCC
Q 013075 218 DNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQVQVPTVIDENLFFTVGLGLINCSNPN 297 (450)
Q Consensus 218 ~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~ 297 (450)
......++++|.+.... .. |. .|..+.+...+...++++.+..+
T Consensus 279 ~~~~~~~~~~~~~~~~~-------~~----p~---------------~L~~lp~~~~~~~~~~~~~l~~~---------- 322 (448)
T 3aw5_A 279 GSEYTIATFLVEGKGEA-------VP----VE---------------ALSDPPPEPPKPTRTRRFALSLS---------- 322 (448)
T ss_dssp TSCEEEEEEEEEEECCC-------CC----CC---------------CCSCCCCCCCCCSEEEEEEEEEE----------
T ss_pred CCCceEEEEEEcCCCCC-------CC----cc---------------ccCCCCCCCCCCCceEEEEEeCC----------
Confidence 22356788888754331 01 10 01111111123344555554321
Q ss_pred CCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCCCCCCCcCCCCCceeEE-eecCC
Q 013075 298 SPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYK-LKFGS 376 (450)
Q Consensus 298 ~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~-~~~g~ 376 (450)
...|+|||++|..++. .+. ++.|+
T Consensus 323 ----------~~~~~iNg~~~~~~~p---------------------------------------------~~~~~~~g~ 347 (448)
T 3aw5_A 323 ----------GMQWTINGMFWNASNP---------------------------------------------LFEHVSVEG 347 (448)
T ss_dssp ----------TTEEEETTBCCCTTCT---------------------------------------------TCCCEEECE
T ss_pred ----------CceeeECCCcCCCCCC---------------------------------------------ceeccCCCC
Confidence 1258999998863211 234 78899
Q ss_pred EEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCC----CCCCCCccceEEeCCCCEEEEE--EE---cc
Q 013075 377 RVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKF----NLIDPPRRNTIGTPPGGWVAVR--FV---AE 447 (450)
Q Consensus 377 ~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~----n~~~P~~RDTv~vp~~g~~viR--f~---ad 447 (450)
+|+|+|+|.+ ..+.||||||||+||||+++ |.+....+...+ +..+|.|||||.|+++++++|+ |+ ||
T Consensus 348 ~v~~~i~N~~--~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~ad 424 (448)
T 3aw5_A 348 VELWEIVNDK--ASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRG 424 (448)
T ss_dssp EEEEEEEECS--SSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTT
T ss_pred eEEEEEEcCC--CCCCcCEEECCceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCC
Confidence 9999999964 15689999999999999984 544311111122 2334579999999999999665 99 99
Q ss_pred CC
Q 013075 448 NP 449 (450)
Q Consensus 448 NP 449 (450)
||
T Consensus 425 np 426 (448)
T 3aw5_A 425 QL 426 (448)
T ss_dssp CE
T ss_pred Cc
Confidence 97
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=2e-64 Score=523.05 Aligned_cols=348 Identities=16% Similarity=0.202 Sum_probs=248.0
Q ss_pred CeeeccCCCCCCCCCCCCCCC--cccCCCCCCCeE---EEEEEeCCceeeeeeccChhh----hh-cceeEEEEEecCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEY--VTQCPIQPGRSY---TYRFTIEDQEGTLWWHAHSRW----LR-ATVYGALIVYPRMG 70 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~--~tq~~i~pg~~~---~Y~f~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~ 70 (450)
|+|||||+++.+ +|||+|+ ++||+|+||++| +|+|++.+++||||||||.++ |+ +||+|+|||+++.+
T Consensus 102 tsiHwHGl~~~~--~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~ 179 (513)
T 2wsd_A 102 TVVHLHGGVTPD--DSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKE 179 (513)
T ss_dssp BCEEEETCCCCG--GGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGG
T ss_pred cEEEcCCCcCCC--ccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccc
Confidence 689999999874 5999996 799999999555 999987567999999999974 55 49999999999876
Q ss_pred CCCCCCCCCCceeEEEeeeecCChHHHHHHhh----------hcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCC
Q 013075 71 SPYPFPMPKREIPILIGEWWDRDPMDVLRQAL----------FTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGE 140 (450)
Q Consensus 71 ~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~----------~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~ 140 (450)
...+++.+++|++|+|+||+++...++..... ........++++||||+.. +.+.|++|
T Consensus 180 ~~~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------p~~~v~~~- 248 (513)
T 2wsd_A 180 KRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEPR- 248 (513)
T ss_dssp GGGCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCSS-
T ss_pred ccccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc----------ceEEecCC-
Confidence 55555567899999999999877544321110 0011234679999999986 78999985
Q ss_pred EEEEEEEecCCCceEEEEEeCc-ceEEEEeCCCcc-CceeecEEEecCCCeEEEEEEeCCCCcee-EEEeeeeccccccC
Q 013075 141 TILLRIINSAMNQEHFFGVANH-KLTVVGVDTSYT-KPFPTSVIMIAPGQTTNVLLTADQPPARY-YMAAHAYNTANAAF 217 (450)
Q Consensus 141 ~~rlRliN~~~~~~~~~~i~gh-~~~via~DG~~v-~P~~~~~i~l~~G~R~dv~v~~~~~~g~y-~l~~~~~~~~~~~~ 217 (450)
+|||||||+|+.+.+.|+|++| +|+|||+||+++ +|+.++.|.|++||||||+|++++.+|++ .+... ..|...+
T Consensus 249 ~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~--~~~~~~~ 326 (513)
T 2wsd_A 249 KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANS--AGCGGDV 326 (513)
T ss_dssp EEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEEC--CCSSSSC
T ss_pred EEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEec--ccccccC
Confidence 8999999999999999999999 999999999998 89999999999999999999999867863 33332 2221112
Q ss_pred CCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccccCC-CCcccceeEEEEeccceeccCCC
Q 013075 218 DNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQVQ-VPTVIDENLFFTVGLGLINCSNP 296 (450)
Q Consensus 218 ~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~-~p~~~d~~~~~~~~~~~~~~~~~ 296 (450)
......+|++|..+..... .....+|.. |..+...+ .+...++++.+...+..
T Consensus 327 ~~~~~~~il~~~~~~~~~~-----~~~~~~p~~---------------l~~~~~~~~~~~~~~~~~~l~~~~~~------ 380 (513)
T 2wsd_A 327 NPETDANIMQFRVTKPLAQ-----KDESRKPKY---------------LASYPSVQHERIQNIRTLKLAGTQDE------ 380 (513)
T ss_dssp CTTTTTEEEEEECCSCCSS-----CCCCCCCSB---------------CSCCGGGCCCCEEEEEEEEEEEEECT------
T ss_pred CCCCCcceEEEEeccCccc-----CccCCCCcc---------------ccCCCCcccCCCcceEEEEEEeecCC------
Confidence 2223468899976532100 011111110 11000000 11233455544433211
Q ss_pred CCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCCCCCCCcCCCCCceeEEeecCC
Q 013075 297 NSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLKFGS 376 (450)
Q Consensus 297 ~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 376 (450)
. +...|+|||++|..|. .+.++.|+
T Consensus 381 --------~-g~~~~~iNg~~~~~~~----------------------------------------------~~~~~~g~ 405 (513)
T 2wsd_A 381 --------Y-GRPVLLLNNKRWHDPV----------------------------------------------TETPKVGT 405 (513)
T ss_dssp --------T-SCEEEEETTBCTTSCC----------------------------------------------CBCCBTTC
T ss_pred --------C-CCceEeECCccCCCcc----------------------------------------------cEecCCCC
Confidence 2 2457889999885221 24567899
Q ss_pred EEEEEEEeCCCCCCCCCCcccCCCceEEEEecCC---CCCCCCCCCCCCCC---------CCCccceEEeCCCCEEEEEE
Q 013075 377 RVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLG---NFNPSTDTAKFNLI---------DPPRRNTIGTPPGGWVAVRF 444 (450)
Q Consensus 377 ~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G---~~~~~~~~~~~n~~---------~P~~RDTv~vp~~g~~viRf 444 (450)
+|+|+|+|.+ .+.||||||||+||||+++.+ .|++.. .+|+. ++.|||||.|+++++++|+|
T Consensus 406 ~~~w~l~N~~---~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~ 479 (513)
T 2wsd_A 406 TEIWSIINPT---RGTHPIHLHLVSFRVLDRRPFDIARYQESG---ELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAA 479 (513)
T ss_dssp EEEEEEEECS---SSCEEEEESSCCEEEEEEEEBCHHHHHHHC---CCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEE
T ss_pred EEEEEEEcCC---CCCcCEeEeCceEEEEEecCcccccccccc---cccccCCCCCCCccccCcccEEEeCCCCEEEEEE
Confidence 9999999964 568999999999999998742 222111 12333 34599999999999999999
Q ss_pred Ec-cCCC
Q 013075 445 VA-ENPG 450 (450)
Q Consensus 445 ~a-dNPG 450 (450)
++ ||||
T Consensus 480 ~f~dnpG 486 (513)
T 2wsd_A 480 TFGPYSG 486 (513)
T ss_dssp ECCSCCE
T ss_pred EecCCCC
Confidence 88 8998
No 13
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=7.9e-64 Score=518.95 Aligned_cols=341 Identities=18% Similarity=0.234 Sum_probs=248.0
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChhhh----h-cceeEEEEEecCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWL----R-ATVYGALIVYPRMGSPYPF 75 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~----~-~Gl~G~liV~~~~~~~~~~ 75 (450)
|||||||+++.+ +|||+ +||+|+||++|+|+|++.+++||||||||.+++ + +||+|+|||+++.+...++
T Consensus 91 tsiHwHGl~~~~--~~DG~---~~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~l 165 (534)
T 3abg_A 91 NSVHLHGSFSRA--AFDGW---AEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNL 165 (534)
T ss_dssp BCEEEETCCCCT--TTTTC---SSSCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCT
T ss_pred ceEEECCCcCCC--CCCCC---CCCCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCC
Confidence 689999999876 59997 589999999999999885557999999999764 4 4999999999988755544
Q ss_pred CC--CCCceeEEEeeeecCChHHHHHHhhhcCC-CCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCC
Q 013075 76 PM--PKREIPILIGEWWDRDPMDVLRQALFTGG-APNISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMN 152 (450)
Q Consensus 76 ~~--~~~e~~l~l~d~~~~~~~~~~~~~~~~~~-~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~ 152 (450)
+. .++|++|+|+||++....++.. ..+. ....+|.++|||+.. +.+.|++ ++|||||||+|+.
T Consensus 166 p~~~~~~d~~l~l~d~~~~~~g~~~~---~~~~~~~~~gd~~lvNG~~~----------p~~~v~~-~~~RlRliNa~~~ 231 (534)
T 3abg_A 166 PSGYGEFDIPMILTSKQYTANGNLVT---TNGELNSFWGDVIHVNGQPW----------PFKNVEP-RKYRFRFLDAAVS 231 (534)
T ss_dssp TCCHHHHSCCEEEEEECBCSSSCBCC---CTTCSSCCCCSEEEETTEES----------CBCBCCS-SEEEEEEEECCSS
T ss_pred CccCCcceEEEEEeeeeecCCCceec---cCCCCccccCceeccCCccC----------ceEEecC-cEEEEEEEecCCc
Confidence 43 2678999999998876544321 1111 234689999999976 6788988 5999999999999
Q ss_pred ceEEEEEeC-------cceEEEEeCCCc-cCceeecEEEecCCCeEEEEEEeCCCCc-eeEEEeeeec-cccc-cCCCcc
Q 013075 153 QEHFFGVAN-------HKLTVVGVDTSY-TKPFPTSVIMIAPGQTTNVLLTADQPPA-RYYMAAHAYN-TANA-AFDNTT 221 (450)
Q Consensus 153 ~~~~~~i~g-------h~~~via~DG~~-v~P~~~~~i~l~~G~R~dv~v~~~~~~g-~y~l~~~~~~-~~~~-~~~~~~ 221 (450)
+.+.|+|++ |+|+|||+||++ .+|+.++.|.|++||||||+|++++.+| +|+|++.... .+.. ......
T Consensus 232 ~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~ 311 (534)
T 3abg_A 232 RSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDN 311 (534)
T ss_dssp CCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTT
T ss_pred ceEEEEEecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCC
Confidence 999999987 999999999985 5899999999999999999999998677 7999985421 1111 111123
Q ss_pred EEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccccCCCCcccceeEEEEeccceeccCCCCCCCc
Q 013075 222 TTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQVQVPTVIDENLFFTVGLGLINCSNPNSPRC 301 (450)
Q Consensus 222 ~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
..+|++|....... . .....+| ..|+++.....+...++++.+ ..
T Consensus 312 ~~~il~~~~~~~~~-~----~~~~~~P---------------~~L~~~~~p~~~~~~~~~~~~--~~------------- 356 (534)
T 3abg_A 312 TDKVMRFVVADDTT-Q----PDTSVVP---------------ANLRDVPFPSPTTNTPRQFRF--GR------------- 356 (534)
T ss_dssp TSEEEEEECCCCSS-C----SCCCCCC---------------CCCCCCSCCCCCCCCCEEEEC--SC-------------
T ss_pred cceeEEEecCCCCc-C----CCCCCCc---------------cccccCCCCCCccccceEEEE--ec-------------
Confidence 46889987543310 0 0000011 012222101112223443322 21
Q ss_pred cCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEE
Q 013075 302 QGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIV 381 (450)
Q Consensus 302 ~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~iv 381 (450)
. ...|+|||++|..+.. | ....++.|++++|+
T Consensus 357 ---~--~~~w~iNG~~f~~~~~-----------------------p--------------------~l~~v~~G~~~~w~ 388 (534)
T 3abg_A 357 ---T--GPTWTINGVAFADVQN-----------------------R--------------------LLANVPVGTVERWE 388 (534)
T ss_dssp ---C--CSTTCCCCBTTBCTTS-----------------------C--------------------CCCEECTTCEEEEE
T ss_pred ---c--CceeEECCcccCCCCC-----------------------c--------------------ceeeccCCCEEEEE
Confidence 1 1368899999864321 0 02457889999999
Q ss_pred EEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEE-ccCCC
Q 013075 382 FQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVRFV-AENPG 450 (450)
Q Consensus 382 i~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~-adNPG 450 (450)
|+|.+ ..+.||||||||+||||++|.|.+.. ...++++ .|||||.|++++|++|||+ |||||
T Consensus 389 i~N~~--~~~~HP~HLHG~~F~Vl~~~~g~~~~----~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG 451 (534)
T 3abg_A 389 LINAG--NGWTHPIHIHLVDFKVISRTSGNNAR----TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPG 451 (534)
T ss_dssp EEECS--SSCCCCEEESSCCEEEEEESSCCSSS----CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCE
T ss_pred EEcCC--CCCCcCEEECCeeEEEEEEcCCCCcC----cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCc
Confidence 99964 24589999999999999997664421 1345556 8999999999999999998 99998
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=2.4e-61 Score=513.13 Aligned_cols=379 Identities=16% Similarity=0.173 Sum_probs=237.4
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChh----hhhc-ceeEEEEEecCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSR----WLRA-TVYGALIVYPRMGSPYPF 75 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~----~~~~-Gl~G~liV~~~~~~~~~~ 75 (450)
|+|||||+++.+ +|||++ ||+|+||++|+|+|++.+++||||||||.+ .|+. ||+|+|||+++.+..+++
T Consensus 128 ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~~~~~~~ 202 (612)
T 3gyr_A 128 SVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGL 202 (612)
T ss_dssp BCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTC
T ss_pred ceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCccccccCC
Confidence 689999999854 699975 999999999999999855689999999974 5664 999999999987766666
Q ss_pred CCCCCceeEEEeeeecCChHHHHHHhh-------------h---cCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCC
Q 013075 76 PMPKREIPILIGEWWDRDPMDVLRQAL-------------F---TGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAG 139 (450)
Q Consensus 76 ~~~~~e~~l~l~d~~~~~~~~~~~~~~-------------~---~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G 139 (450)
..+++|++|+|+||+++...+...... . .......++.++|||+.. +.+.++.
T Consensus 203 p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~----------p~~~v~~- 271 (612)
T 3gyr_A 203 PSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW----------PYADVDD- 271 (612)
T ss_dssp CCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES----------CEEEEES-
T ss_pred CCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc----------ceEeccC-
Confidence 678999999999998765433211000 0 001123578899999975 7788875
Q ss_pred CEEEEEEEecCCCceEEEEEeCcc-------eEEEEeCCCcc-Ccee------ecEEEecCCCeEEEEEEeCCCCceeEE
Q 013075 140 ETILLRIINSAMNQEHFFGVANHK-------LTVVGVDTSYT-KPFP------TSVIMIAPGQTTNVLLTADQPPARYYM 205 (450)
Q Consensus 140 ~~~rlRliN~~~~~~~~~~i~gh~-------~~via~DG~~v-~P~~------~~~i~l~~G~R~dv~v~~~~~~g~y~l 205 (450)
++|||||||+|+.+.++|+|++|. |+|||+||+++ +|+. ++.|.|++||||||+|++++..|.++.
T Consensus 272 ~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~~~~~~~ 351 (612)
T 3gyr_A 272 GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLR 351 (612)
T ss_dssp SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEE
T ss_pred cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECCCCCceEEE
Confidence 589999999999999999999984 99999999998 4654 458999999999999999987775554
Q ss_pred Eeeeecccc----ccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhh--hhcccccccCCCCcccc
Q 013075 206 AAHAYNTAN----AAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAF--TARIKSLHQVQVPTVID 279 (450)
Q Consensus 206 ~~~~~~~~~----~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~--~~~l~~l~p~~~p~~~d 279 (450)
......... .........++++|........ ....+|.............. ...+..+.+........
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (612)
T 3gyr_A 352 LVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEE------DSFALPEVLSGSFRRMSHDIPHGHRLIVLTPPGTKGSGG 425 (612)
T ss_dssp EEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCC------CCCCCCSSCCSSCCCCCTTSCCEEEEEEEECTTCTTTTT
T ss_pred EEecCCcCCcCccCccccccccceeeecccCCCCC------Ccccccccccccccccccccccccccccccccccccccc
Confidence 433221111 1112234456676654433111 11111111100000000000 00000000000000000
Q ss_pred eeEEEEeccceec--cCCCCCC--CccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCC
Q 013075 280 ENLFFTVGLGLIN--CSNPNSP--RCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGN 355 (450)
Q Consensus 280 ~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 355 (450)
....+........ ...+... .....++....|.+|+..|.
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~------------------------------------ 469 (612)
T 3gyr_A 426 HPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFN------------------------------------ 469 (612)
T ss_dssp CCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTT------------------------------------
T ss_pred cccccccccccccccccccccceeeeccCCCccccccccCccCC------------------------------------
Confidence 0000000000000 0000000 00000112233333333221
Q ss_pred CCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCC---C------------CCCC
Q 013075 356 VSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPS---T------------DTAK 420 (450)
Q Consensus 356 ~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~---~------------~~~~ 420 (450)
+...+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+.+... . ....
T Consensus 470 ----------~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (612)
T 3gyr_A 470 ----------DGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVP 536 (612)
T ss_dssp ----------SCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECC
T ss_pred ----------CCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccC
Confidence 233578999999999999964 57899999999999999864333221 0 0123
Q ss_pred CCCCCCCccceEEeCCCCEEEEEEE-ccCCC
Q 013075 421 FNLIDPPRRNTIGTPPGGWVAVRFV-AENPG 450 (450)
Q Consensus 421 ~n~~~P~~RDTv~vp~~g~~viRf~-adNPG 450 (450)
.+..++.|||||.|++++|++|||+ +||||
T Consensus 537 ~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG 567 (612)
T 3gyr_A 537 LAPNELGHKDVFQVPGPQGLRVMGKFDGAYG 567 (612)
T ss_dssp CCTTCSSCBSEEEECSSEEEEEEEECCSCCE
T ss_pred cccccCCCCcEEEECCCCEEEEEEEeCCCCc
Confidence 4566788999999999999999998 89998
No 15
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3e-60 Score=484.30 Aligned_cols=338 Identities=20% Similarity=0.291 Sum_probs=234.2
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCc-eeeeeeccCh----hhhhc-ceeEEEEEecCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQ-EGTLWWHAHS----RWLRA-TVYGALIVYPRMGSPYP 74 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~-~Gt~wYH~H~----~~~~~-Gl~G~liV~~~~~~~~~ 74 (450)
|||||||+++. ++|||+| ||+|+||++|+|+|++.++ +||||||||. ..|+. ||+|+|||+++++..++
T Consensus 104 tsiHwHGl~~~--~~~DG~p---q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~ 178 (481)
T 3zx1_A 104 TTIHWHGVPVP--PDQDGSP---HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSH 178 (481)
T ss_dssp BCCEEETCCCC--GGGSCCT---TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTT
T ss_pred eeEEecCcccC--CccCCCc---cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccC
Confidence 68999999985 4699996 9999999999999998433 8999999996 45764 99999999998765432
Q ss_pred CCCCCCceeEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCce
Q 013075 75 FPMPKREIPILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQE 154 (450)
Q Consensus 75 ~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~ 154 (450)
+ ++++ |+|+||+++...++.............++.++|||+.. +.++|++|+ ||||||+|+.+.
T Consensus 179 ~---~~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~~----------p~l~v~~g~--RlRliNa~~~~~ 242 (481)
T 3zx1_A 179 L---KEKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFK----------PKIKLATNE--RIRIYNATAARY 242 (481)
T ss_dssp S---EEEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEES----------CEEEEETTE--EEEEEECCSSCC
T ss_pred C---Ccee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCccC----------ceEEecCCC--EEEEEecCCCeE
Confidence 2 3444 99999998765432100000000123678999999975 799999998 999999999999
Q ss_pred EEEEEeCcceEEEEeCCCcc-CceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccccC-CCccEEEEEEeccCC
Q 013075 155 HFFGVANHKLTVVGVDTSYT-KPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANAAF-DNTTTTAILEYKSAP 232 (450)
Q Consensus 155 ~~~~i~gh~~~via~DG~~v-~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~-~~~~~~ail~y~~~~ 232 (450)
+.|+|+||+|+|||+||.++ +|+.++.|.|+|||||||+|++++ .+.|.|.+.......... .......+++.....
T Consensus 243 ~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 321 (481)
T 3zx1_A 243 LNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPK-DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKK 321 (481)
T ss_dssp EEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECSS-CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEEC
T ss_pred EEEEECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcCC-CcEEEEEEecccccCccccCCCCceeEEEEecCC
Confidence 99999999999999998765 899999999999999999999995 578999876543311110 111223333333211
Q ss_pred CCCCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccccCCCCcccceeEEEEeccceeccCCCCCCCccCCCCCe----
Q 013075 233 FNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTR---- 308 (450)
Q Consensus 233 ~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 308 (450)
. .. .+|.. |.++.+.+.+ ..++++.|.... .... ... . .+..
T Consensus 322 ~--------~~--~lP~~---------------l~~~~~~~~~-~~~r~~~l~~~~--~~~~----~~~-~-~~~~~~~~ 367 (481)
T 3zx1_A 322 E--------NV--ELPKN---------------LKIFKPSEEP-KEFKEIIMSEDH--MQMH----GMM-G-KSEGELKI 367 (481)
T ss_dssp C--------CC--CCCSC---------------SCCCCCCCCC-CEEEEEEEEECC--STTT----TGG-G-CCHHHHHH
T ss_pred C--------Cc--cCCcc---------------ccCCCCCCCC-CcEEEEEEeccc--hhcc----ccc-c-cccccccc
Confidence 1 00 01110 1111111111 133344443221 1000 000 0 0000
Q ss_pred ---eeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeC
Q 013075 309 ---FAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDT 385 (450)
Q Consensus 309 ---~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~ 385 (450)
..|+|||+.|... ...+.++.|++|+|+|.|.
T Consensus 368 ~~~~~~~iNG~~~~~~---------------------------------------------~~~~~~~~G~~v~w~l~N~ 402 (481)
T 3zx1_A 368 ALASMFLINRKSYDLK---------------------------------------------RIDLSSKLGVVEDWIVINK 402 (481)
T ss_dssp HHHTTEEETTBCCCTT---------------------------------------------CCCEEEETTCCEEEEEEEC
T ss_pred cccceeEECCEeCCCC---------------------------------------------CceEEeCCCCEEEEEEEcC
Confidence 2489999877421 1247889999999999995
Q ss_pred CCCCCCCCCcccCCCceEEEEec-CCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEccCCC
Q 013075 386 SIVSVEDHPMHLHGHEFYVVGSG-LGNFNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 386 ~~~~~~~HP~HLHGh~F~Vl~~g-~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG 450 (450)
+ .+.||||||||+|+|++++ .|. ......+.|||||.|+|+++++|+|+|||||
T Consensus 403 ~---~~~Hp~HlHG~~F~vl~~~~~g~--------~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG 457 (481)
T 3zx1_A 403 S---HMDHPFHIHGTQFELISSKLNGK--------VQKAEFRALRDTINVRPNEELRLRMKQDFKG 457 (481)
T ss_dssp S---SSCEEEEETTCCEEEEEEEETTE--------EEECSSCCEESEEEECTTCEEEEEECCCSCE
T ss_pred C---CCceeEEEeccEEEEEEecccCC--------CCCcccCcccceEEECCCCEEEEEEEcCCCe
Confidence 4 6799999999999999983 121 0112357899999999999999999999998
No 16
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=5.5e-59 Score=486.32 Aligned_cols=375 Identities=18% Similarity=0.211 Sum_probs=244.8
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChhh----hh-cceeEEEEEecCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRW----LR-ATVYGALIVYPRMGSPYPF 75 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~ 75 (450)
|+|||||+++.+. +||++ ||+|+||++|+|+|++.+++||||||||.+. |+ +||+|+|||+++++..+++
T Consensus 128 tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~l 202 (612)
T 2g23_A 128 SVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGL 202 (612)
T ss_dssp BCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTC
T ss_pred eEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhccceeEEEEcCcccccccC
Confidence 5899999999765 99985 9999999999999987557999999999975 66 4999999999987655556
Q ss_pred CCCCCceeEEEeeeecCChHHH-HH-Hh------hh----cCCC----CCCCCceeeCCcccCCCCCCCCceeeEEeeCC
Q 013075 76 PMPKREIPILIGEWWDRDPMDV-LR-QA------LF----TGGA----PNISDALTINGQPGDLYRCSSKETVRFPVEAG 139 (450)
Q Consensus 76 ~~~~~e~~l~l~d~~~~~~~~~-~~-~~------~~----~~~~----~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G 139 (450)
+.+|+|++|+|+||+++...+. +. .. .. .+.. +..+|.+||||+.. +.++|++|
T Consensus 203 p~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~----------p~~~V~~g 272 (612)
T 2g23_A 203 PSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW----------PYADVDDG 272 (612)
T ss_dssp CCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES----------CEEEEESS
T ss_pred CCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC----------CeEEecCC
Confidence 6789999999999999754210 00 00 00 0111 24689999999976 89999999
Q ss_pred CEEEEEEEecCCCceEEEEEeCc-------ceEEEEeCCCcc-Cceeec------EEEecCCCeEEEEEEeCCCCc-eeE
Q 013075 140 ETILLRIINSAMNQEHFFGVANH-------KLTVVGVDTSYT-KPFPTS------VIMIAPGQTTNVLLTADQPPA-RYY 204 (450)
Q Consensus 140 ~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~v-~P~~~~------~i~l~~G~R~dv~v~~~~~~g-~y~ 204 (450)
+|||||||+|+.+.+.|+|++| +|+|||+||+++ +|+.++ .|.|++||||||+|++++.+| +|+
T Consensus 273 -~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~ 351 (612)
T 2g23_A 273 -WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLR 351 (612)
T ss_dssp -EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEE
T ss_pred -eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEECCCCCCCEEE
Confidence 9999999999999999999999 899999999999 599999 999999999999999998776 688
Q ss_pred EEeeeecccccc---CCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCC-----CCCC-CccchhhhhhcccccccC-CC
Q 013075 205 MAAHAYNTANAA---FDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPIL-----PGFN-DTATATAFTARIKSLHQV-QV 274 (450)
Q Consensus 205 l~~~~~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~-----p~~~-~~~~~~~~~~~l~~l~p~-~~ 274 (450)
|+.......... ........|+++........+ ...+|.. +... +.... ..+..+.+. ..
T Consensus 352 L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~------~~~~P~~L~~~~~~l~~~~~~~----~r~~~~~~~~~~ 421 (612)
T 2g23_A 352 LVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEED------SFALPEVLSGSFRRMSHDIPHG----HRLIVLTPPGTK 421 (612)
T ss_dssp EEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCC------CCCCCSSCCSSCCCCCTTSCCE----EEEEEECCTTCT
T ss_pred EEeCCccCCCCccccccCccccceEEEEEccCCCCC------CCCCChhhccccccCCcccccc----eeEEeecccccc
Confidence 887642111100 001111234544432221000 1111110 0000 00000 000000000 00
Q ss_pred C-cccceeEEEEeccceeccCCCCCCC--ccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccc
Q 013075 275 P-TVIDENLFFTVGLGLINCSNPNSPR--CQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFD 351 (450)
Q Consensus 275 p-~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~ 351 (450)
. ....+.+.+.-.........+.... ....+|....|+|||+.|..
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~------------------------------- 470 (612)
T 2g23_A 422 GSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFND------------------------------- 470 (612)
T ss_dssp TSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTS-------------------------------
T ss_pred ccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCC-------------------------------
Confidence 0 0000111111000000000000000 00113334568899987741
Q ss_pred cCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCC---CCCC-----------
Q 013075 352 YTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFN---PSTD----------- 417 (450)
Q Consensus 352 ~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~---~~~~----------- 417 (450)
...+.++.|++|+|.|.|.+ .+.||||||||.|+||+++.+.++ ....
T Consensus 471 ---------------~~~~~v~~G~~v~w~l~N~~---~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g 532 (612)
T 2g23_A 471 ---------------GLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPD 532 (612)
T ss_dssp ---------------CCCEEEETTCEEEEEEEECS---SSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEE
T ss_pred ---------------CCceEecCCCEEEEEEEeCC---CCCCCeEEcCceEEEecccCcccccccccccCcccccccccc
Confidence 12578899999999999964 568999999999999998633221 1100
Q ss_pred -CCCCCCCCCCccceEEeCCCCEEEEEEEcc-CCC
Q 013075 418 -TAKFNLIDPPRRNTIGTPPGGWVAVRFVAE-NPG 450 (450)
Q Consensus 418 -~~~~n~~~P~~RDTv~vp~~g~~viRf~ad-NPG 450 (450)
....+..++.|||||.|+|+++++|+|++| |||
T Consensus 533 ~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG 567 (612)
T 2g23_A 533 TPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYG 567 (612)
T ss_dssp EECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCE
T ss_pred cccCCCcccccccCeEEECCCcEEEEEEEeCCCCc
Confidence 022344556799999999999999999999 997
No 17
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=1.5e-58 Score=471.48 Aligned_cols=350 Identities=17% Similarity=0.250 Sum_probs=233.5
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChh----hhhc-ceeEEEEEecCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSR----WLRA-TVYGALIVYPRMGSPYPF 75 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~----~~~~-Gl~G~liV~~~~~~~~~~ 75 (450)
|+|||||+++.+ ++||+| ||+|+||++|+|+|++.+++||||||||.+ .|+. ||+|+|||+++.+...++
T Consensus 70 tsiHwHG~~~~~--~~DG~p---~~~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~l 144 (488)
T 3od3_A 70 TTLHWHGLEVPG--EVDGGP---QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLML 144 (488)
T ss_dssp BCCEEETCCCCH--HHHCCT---TCCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCC
T ss_pred eeEeecccccCc--ccCCCC---cCcCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCC
Confidence 689999999975 599986 999999999999999855589999999974 4664 999999999886544333
Q ss_pred CC--CCCceeEEEeeeecCChHHHHHHhh-hcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCC
Q 013075 76 PM--PKREIPILIGEWWDRDPMDVLRQAL-FTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMN 152 (450)
Q Consensus 76 ~~--~~~e~~l~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~ 152 (450)
+. ..+|++|+|+||+++...++..... ........++.++|||+.. +.+.+ +|++|||||||+|+.
T Consensus 145 p~~y~~~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~----------p~~~v-~g~~~RlRliNas~~ 213 (488)
T 3od3_A 145 PKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIY----------PQHAA-PRGWLRLRLLNGCNA 213 (488)
T ss_dssp CCCBTTTEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBSS----------CEEEE-EEEEEEEEEEECCSS
T ss_pred cccCCccceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCcC----------ccEec-CCCEEEEEEEccCCC
Confidence 32 3468999999999876543211000 0000124678999999975 55655 578999999999999
Q ss_pred ceEEEEE-eCcceEEEEeCCCcc-CceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccc---cCCCccEEEEEE
Q 013075 153 QEHFFGV-ANHKLTVVGVDTSYT-KPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANA---AFDNTTTTAILE 227 (450)
Q Consensus 153 ~~~~~~i-~gh~~~via~DG~~v-~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~---~~~~~~~~ail~ 227 (450)
+.+.|+| +||+|+|||+||+++ +|+.++.|.|+|||||||+|++++ .+.|.|++........ .+.. ...+++
T Consensus 214 ~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~--~~~~~~ 290 (488)
T 3od3_A 214 RSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND-NKPFDLVTLPVSQMGMAIAPFDK--PHPVMR 290 (488)
T ss_dssp CCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT-TCCEEEEECCCSSTTTTSTTTTS--CEEEEE
T ss_pred ceeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeCC-CceEEEEEeccCCCCcccccccC--ccceeE
Confidence 9999999 699999999999987 899999999999999999999995 5789998765432211 1221 222333
Q ss_pred eccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhccccccc-CCCCcccceeEEEEeccce--------------ec
Q 013075 228 YKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQ-VQVPTVIDENLFFTVGLGL--------------IN 292 (450)
Q Consensus 228 y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p-~~~p~~~d~~~~~~~~~~~--------------~~ 292 (450)
...... .....+|.. |..+.+ .......++++.+.+.... ..
T Consensus 291 ~~~~~~--------~~~~~~P~~---------------L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~ 347 (488)
T 3od3_A 291 IQPIAI--------SASGALPDT---------------LSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQA 347 (488)
T ss_dssp EEEEEE--------ECCCCCCSC---------------CCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGG
T ss_pred eccccc--------CCCCCCCcc---------------cccCCCCcccccccceEEEEEecccccccccccccccccccc
Confidence 221111 000011110 111100 0011223455555432100 00
Q ss_pred cCC--------C--CCCCccCCCCCee----eeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCCCCC
Q 013075 293 CSN--------P--NSPRCQGPNGTRF----AASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNVSR 358 (450)
Q Consensus 293 ~~~--------~--~~~~~~~~~~~~~----~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~ 358 (450)
... . .........+..+ .|+|||++|...+
T Consensus 348 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~~~------------------------------------ 391 (488)
T 3od3_A 348 MAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMNK------------------------------------ 391 (488)
T ss_dssp GTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCTTC------------------------------------
T ss_pred cccccccccccccccCccccccccccccccceeeECCeeCCCCC------------------------------------
Confidence 000 0 0000000011112 3799999885221
Q ss_pred CCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCccceEEeCCCC
Q 013075 359 GLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPPGG 438 (450)
Q Consensus 359 ~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g 438 (450)
..+.++.|++++|.|.|.+ +.+.||||||||+|+|++++..... ...+.|||||.|+ ++
T Consensus 392 ---------~~~~~~~G~~e~w~l~N~~--~~~~Hp~HlHg~~F~Vl~~~g~~~~---------~~~~~~kDTV~v~-g~ 450 (488)
T 3od3_A 392 ---------PMFAAAKGQYERWVISGVG--DMMLHPFHIHGTQFRILSENGKPPA---------AHRAGWKDTVKVE-GN 450 (488)
T ss_dssp ---------CSEECCBSSCEEEEEECTT--CCCCEEEEETTCCBEEEEBTTBCCC---------GGGSSSBSEEEES-SS
T ss_pred ---------CceEcCCCCEEEEEEEeCC--CCCCccEEEcCceEEEeccCCCccc---------cccCCceeEEEeC-CC
Confidence 1367899999999999965 2468999999999999998522111 1245699999999 99
Q ss_pred EEEEEEEccCC
Q 013075 439 WVAVRFVAENP 449 (450)
Q Consensus 439 ~~viRf~adNP 449 (450)
++.|+|++|+|
T Consensus 451 ~~~i~~~f~~~ 461 (488)
T 3od3_A 451 VSEVLVKFNHD 461 (488)
T ss_dssp EEEEEECBCSC
T ss_pred EEEEEEEeccC
Confidence 99999998765
No 18
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=5.4e-44 Score=397.27 Aligned_cols=210 Identities=14% Similarity=0.192 Sum_probs=162.6
Q ss_pred CeeeccCCCCC----CCCCCCCCCC--cccCCCCCCCeEEEEEEeCCc---------eeeeeeccChhhhh---cceeEE
Q 013075 1 MSLFRHGVHQT----RNPWADGPEY--VTQCPIQPGRSYTYRFTIEDQ---------EGTLWWHAHSRWLR---ATVYGA 62 (450)
Q Consensus 1 t~iH~HG~~~~----~~~~~DGv~~--~tq~~i~pg~~~~Y~f~~~~~---------~Gt~wYH~H~~~~~---~Gl~G~ 62 (450)
|||||||+++. +.+|+||+++ +|||+|+||++|+|+|++.++ +||||||||.+.|+ +||+|+
T Consensus 117 tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~aGT~wYHsH~~~~~qv~~GL~G~ 196 (1065)
T 2j5w_A 117 YTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGP 196 (1065)
T ss_dssp BCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSEEEEEEECCSSHHHHHHHTCEEE
T ss_pred eeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCceEEEEEeccCchhHhhCccEEE
Confidence 68999999997 5688999999 899999999999999998543 59999999999875 499999
Q ss_pred EEEecCCCCCCCCC-CCCCceeEEEeee------ecCChHHHHHHhhhcCCC-------CCCCCceeeCCcccCCCCCCC
Q 013075 63 LIVYPRMGSPYPFP-MPKREIPILIGEW------WDRDPMDVLRQALFTGGA-------PNISDALTINGQPGDLYRCSS 128 (450)
Q Consensus 63 liV~~~~~~~~~~~-~~~~e~~l~l~d~------~~~~~~~~~~~~~~~~~~-------~~~~~~~liNG~~~~~~~~~~ 128 (450)
|||+++.....|.+ .+|+|++|+|+|| ++......+. ...+.. ...++.++|||+.. |
T Consensus 197 lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~iNG~~~----~-- 268 (1065)
T 2j5w_A 197 LIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYC--SEPEKVDKDNEDFQQSNRMYSVNGYTF----G-- 268 (1065)
T ss_dssp EEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHC--SCGGGCCTTCHHHHHHTEEEEETTEET----T--
T ss_pred EEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhh--cCccccccccccccccCcEEEECCccC----C--
Confidence 99999876443332 3688999999954 4332111110 000000 01245789999863 1
Q ss_pred CceeeEEeeCCCEEEEEEEecCCC-ceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEe
Q 013075 129 KETVRFPVEAGETILLRIINSAMN-QEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAA 207 (450)
Q Consensus 129 ~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~ 207 (450)
..+.+.|++|++|||||||+|.. ..+.|+|+||.|++ +|+.+++|.|+|||||||+|++++ +|.|+|++
T Consensus 269 -~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv~I~pGer~dVlv~~~~-pG~y~i~~ 338 (1065)
T 2j5w_A 269 -SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTINLFPATLFDAYMVAQN-PGEWMLSC 338 (1065)
T ss_dssp -CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEEEECBTCEEEEEEECCS-CEEEEEEE
T ss_pred -CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEEEECCCcEEEEEEEeCC-CeeEEEEe
Confidence 24689999999999999999976 68999999999993 688999999999999999999996 79999999
Q ss_pred eeeccccccCCCccEEEEEEeccCCC
Q 013075 208 HAYNTANAAFDNTTTTAILEYKSAPF 233 (450)
Q Consensus 208 ~~~~~~~~~~~~~~~~ail~y~~~~~ 233 (450)
+...... ....+++++.+...
T Consensus 339 h~~~h~~-----~Gm~~~~~V~~~~~ 359 (1065)
T 2j5w_A 339 QNLNHLK-----AGLQAFFQVQECNK 359 (1065)
T ss_dssp CSHHHHH-----TTCEEEEEEECSCC
T ss_pred cCcchhh-----CCCEEEEEEecCCC
Confidence 8753211 24578888875433
No 19
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1.9e-43 Score=343.99 Aligned_cols=217 Identities=24% Similarity=0.398 Sum_probs=175.4
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChhhhh----cceeEEEEEecCCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLR----ATVYGALIVYPRMGSPYPFP 76 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~----~Gl~G~liV~~~~~~~~~~~ 76 (450)
++|||||+++.++.++||+|++|||+|+||++++|+|++ +++||||||||...++ +||+|+|||+++...+.+.
T Consensus 56 ~siH~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~- 133 (318)
T 3g5w_A 56 HTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK- 133 (318)
T ss_dssp BCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-
T ss_pred eeEEecCcCCCCCcccCCCcccccccCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-
Confidence 589999999998889999999999999999999999997 7999999999998764 4999999999876432111
Q ss_pred CCCCceeEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEE
Q 013075 77 MPKREIPILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHF 156 (450)
Q Consensus 77 ~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~ 156 (450)
.+++|++|+|+||++..... ....+.....++.++|||+..+ ....+++++|++|||||+|++.. .+.
T Consensus 134 ~~d~e~~l~l~dw~~~~~~~----~~~~~~~~~~~d~~~ING~~~~-------~~~~l~v~~G~~vrlrliN~~~~-~h~ 201 (318)
T 3g5w_A 134 TVTKDYILMLSDWVSSWANK----PGEGGIPGDVFDYYTINAKSFP-------ETQPIRVKKGDVIRLRLIGAGDH-VHA 201 (318)
T ss_dssp TCCEEEEEEEEEECGGGTTC----TTCCCCTTCCCCEEEETTBCBT-------SSCCEEECTTCEEEEEEEECSSS-CEE
T ss_pred cccceeEEEEEeeccccccc----cccCCCCCCcCcEEEEcCcCCC-------CCccEEeCCCCEEEEEEEeCCCc-eEE
Confidence 46899999999998764321 1111222235789999999741 12458999999999999999965 689
Q ss_pred EEEeCcceEEEEeCCCcc-CceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeecccccc-CCCccEEEEEEeccCC
Q 013075 157 FGVANHKLTVVGVDTSYT-KPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANAA-FDNTTTTAILEYKSAP 232 (450)
Q Consensus 157 ~~i~gh~~~via~DG~~v-~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~-~~~~~~~ail~y~~~~ 232 (450)
|+|+||.|+||+.||.++ +|..+|+|.|+||||+||+++++ .||.|.++|+...-.... .......++|+|++.+
T Consensus 202 ~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~-~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 202 IHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMD-NPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECC-SCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEECCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECC-CCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999999999998 79999999999999999999999 579999999975322110 0113458999998765
No 20
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=1.9e-42 Score=340.39 Aligned_cols=217 Identities=26% Similarity=0.458 Sum_probs=173.5
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChhh--hh--cceeEEEEEecCCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRW--LR--ATVYGALIVYPRMGSPYPFP 76 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~--~~--~Gl~G~liV~~~~~~~~~~~ 76 (450)
++|||||+++.+++||||+|++|||+|+||++|+|+|++ .++||||||||... |. +||+|+|||+++.....+.
T Consensus 57 ~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~- 134 (339)
T 2zwn_A 57 HTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEK- 134 (339)
T ss_dssp BCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGG-
T ss_pred ccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccc-
Confidence 589999999999999999999999999999999999997 79999999999876 44 5999999999876432111
Q ss_pred CCCCceeEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEE
Q 013075 77 MPKREIPILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHF 156 (450)
Q Consensus 77 ~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~ 156 (450)
..++|++|+|+||++..... ....+.....++.++|||+... ....+.+++|++|||||+|++. ..+.
T Consensus 135 ~~d~e~~l~l~d~~~~~~~~----~~~~g~~~~~~~~~~ING~~~~-------~~~~~~v~~G~~vrlrliN~~~-~~h~ 202 (339)
T 2zwn_A 135 RVTKDVIMMMSTWESAVADK----YGEGGTPMNVADYFSVNAKSFP-------LTQPLRVKKGDVVKIRFFGAGG-GIHA 202 (339)
T ss_dssp GCSEEEEEEEEEECGGGTTC----TTCCCSTTSCCCEEEETTBCTT-------SSCCEEECTTCEEEEEEEECSS-SCEE
T ss_pred cCCceEEEEeeheecccccc----cCCCCCCccccceEEEccccCC-------CcccEEECCCCEEEEEEEeCCC-ceEE
Confidence 35789999999998732110 0011122235788999998641 1246899999999999999994 5899
Q ss_pred EEEeCcceEEEEeCCCccC-ceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeecccccc-CCCccEEEEEEeccCC
Q 013075 157 FGVANHKLTVVGVDTSYTK-PFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANAA-FDNTTTTAILEYKSAP 232 (450)
Q Consensus 157 ~~i~gh~~~via~DG~~v~-P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~-~~~~~~~ail~y~~~~ 232 (450)
|+|+||+|+||+.||.+++ |..+|++.|+||||+||+|++++ ||.|+++|+...-+... .......++|+|++..
T Consensus 203 ~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~~-pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 203 MHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEADN-PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEETTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCS-CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeCC-CeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 9999999999999999985 88999999999999999999985 79999999865422111 1223458999998754
No 21
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.2e-41 Score=364.45 Aligned_cols=193 Identities=15% Similarity=0.137 Sum_probs=143.7
Q ss_pred CeeeccCCCCCC----CCCCCCCCC--cccCCCCCCCeEEEEEEeCC---------ceeeeeeccChhh--hhc-ceeEE
Q 013075 1 MSLFRHGVHQTR----NPWADGPEY--VTQCPIQPGRSYTYRFTIED---------QEGTLWWHAHSRW--LRA-TVYGA 62 (450)
Q Consensus 1 t~iH~HG~~~~~----~~~~DGv~~--~tq~~i~pg~~~~Y~f~~~~---------~~Gt~wYH~H~~~--~~~-Gl~G~ 62 (450)
|||||||+++.. ++++||+++ +|||+|+||++|+|+|++.+ ++||||||||.+. |++ ||+|+
T Consensus 97 tsIHwHGl~~~~~~DG~p~~Dg~~~~~vtq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~ 176 (742)
T 2r7e_A 97 VSLHAVGVSYWKASEGAEYDDQTSQREKEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGA 176 (742)
T ss_dssp CCCCCSSSCCCSSSSCCCSSCSCCSSSSSSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEE
T ss_pred EeEEecCcccCccccCCccCCCCcccccccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEE
Confidence 799999999864 344444442 99999999999999999843 4699999999987 454 99999
Q ss_pred EEEecCCCCCCCCCCCCCceeEEEee------eecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEe
Q 013075 63 LIVYPRMGSPYPFPMPKREIPILIGE------WWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPV 136 (450)
Q Consensus 63 liV~~~~~~~~~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v 136 (450)
|||+++.....+.....+|++|++++ |++......+.... ........+.++|||+.. | ..+.+++
T Consensus 177 lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~ING~~~----~---~~~~l~v 248 (742)
T 2r7e_A 177 LLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNSLMQDRD-AASARAWPKMHTVNGYVN----R---SLPGLIG 248 (742)
T ss_dssp EEECSSSCTTTTTTTCCCEECCCEECCCCSSSSCCCCCC--------CCSCCCCCCCCEETTBCT----B---CCCCCEE
T ss_pred EEEecCcccCcccCceeeEEEEEeecccCCccccccccccccccCC-CccccccCceEEECCccC----C---CCcceEE
Confidence 99999865432211223888888764 55543321111111 111122467789999863 2 2467899
Q ss_pred eCCCEEEEEEEecCCCc-eEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeee
Q 013075 137 EAGETILLRIINSAMNQ-EHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 137 ~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~ 210 (450)
++|++|||||||+++.. .+.|+|+||.|+|++. .+|.+.|.||++++|++++++ ||.|+++|+..
T Consensus 249 ~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~--------~~Dtv~v~Pg~~~~v~~~~~~-pG~w~~hCH~~ 314 (742)
T 2r7e_A 249 CHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNH--------RQASLEISPITFLTAQTLLMD-LGQFLLFCHIS 314 (742)
T ss_dssp CSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTE--------ECCSCCCCTTCCCEEEECCCS-CSEECCCCCSS
T ss_pred cCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeE--------ecceEEeCCCcEEEEEEEeCC-CeeEEEEeCCh
Confidence 99999999999999765 7889999999999742 478889999999999999995 79999999863
No 22
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=6.8e-39 Score=313.58 Aligned_cols=206 Identities=22% Similarity=0.306 Sum_probs=166.6
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChh---hhh-cceeEEEEEecCCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSR---WLR-ATVYGALIVYPRMGSPYPFP 76 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~---~~~-~Gl~G~liV~~~~~~~~~~~ 76 (450)
++|||||+.+ +||++..+ .|+||++++|+|++ +++||||||||.+ .|. +||+|+|||++++. ++
T Consensus 94 ~~ih~HG~~~-----~dG~~~~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p 161 (327)
T 1kbv_A 94 HNVDFHAATG-----QGGGAAAT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LP 161 (327)
T ss_dssp BCCEETTCCS-----GGGGTTTT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CC
T ss_pred eeeEeCcccc-----CCCCCcce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CC
Confidence 4799999862 79988654 49999999999997 7899999999973 455 49999999998753 23
Q ss_pred CCCCceeEEEeeeecCChHHH-------HHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEec
Q 013075 77 MPKREIPILIGEWWDRDPMDV-------LRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINS 149 (450)
Q Consensus 77 ~~~~e~~l~l~d~~~~~~~~~-------~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~ 149 (450)
.+|+|++|+++||++...... +.... ...++.++|||+...... .+.+++++|++|||||||+
T Consensus 162 ~~d~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~~-----~~~l~v~~G~~vRlRliN~ 231 (327)
T 1kbv_A 162 KVDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAV-----AEQPEYVVFNGHVGALTG-----DNALKAKAGETVRMYVGNG 231 (327)
T ss_dssp CCSEEEEEEEEEECBSSCTTCCEEECBCHHHHH-----HTCCSEEEETTSTTTTSG-----GGCEEEETTEEEEEEEEEE
T ss_pred CCceEEEEEeeeeeccCccccccccccChhHhc-----cCCCceEEEcCcccCCCC-----ceeEEeCCCCEEEEEEECC
Confidence 578999999999998752100 00011 125689999999753322 2679999999999999999
Q ss_pred CCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEec
Q 013075 150 AMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYK 229 (450)
Q Consensus 150 ~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~ 229 (450)
|+...+.|+++||.|+||+.||.+++|..++.+.|+||||+||+|++++ +|.|+|+++....+. .....|+|+|+
T Consensus 232 ~~~~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~-pG~y~l~~h~~~~~~----~~g~~a~l~~~ 306 (327)
T 1kbv_A 232 GPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PGNYTLVDHSIFRAF----NKGALGQLKVE 306 (327)
T ss_dssp ESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CEEEEEEESSTHHHH----HSSCEEEEEEE
T ss_pred CCCCceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeCC-CeEEEEEeccccccc----cCCcEEEEEEC
Confidence 9988999999999999999999999999999999999999999999995 799999998654320 13468999998
Q ss_pred cCCC
Q 013075 230 SAPF 233 (450)
Q Consensus 230 ~~~~ 233 (450)
+...
T Consensus 307 g~~~ 310 (327)
T 1kbv_A 307 GAEN 310 (327)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 7654
No 23
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=4.4e-37 Score=295.47 Aligned_cols=181 Identities=24% Similarity=0.359 Sum_probs=153.0
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChh---hhh-cceeEEEEEecCCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSR---WLR-ATVYGALIVYPRMGSPYPFP 76 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~---~~~-~Gl~G~liV~~~~~~~~~~~ 76 (450)
++|||||+++ .++||+|+++||+|+||++++|+|++ +++||||||||.. .|. +||+|+|||+++...+
T Consensus 88 ~~iH~HG~~~---~~~DG~p~~~~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~---- 159 (288)
T 3gdc_A 88 HTIHFHGVHR---ATMDGTPGIGAGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP---- 159 (288)
T ss_dssp BCCEESSCCC---GGGSCCTTSTTCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----
T ss_pred ccEEeccccc---cccCCCCCccceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----
Confidence 5899999983 46999999999999999999999997 8999999999997 344 4999999999987542
Q ss_pred CCCCceeEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCc-eE
Q 013075 77 MPKREIPILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQ-EH 155 (450)
Q Consensus 77 ~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~ 155 (450)
..++|++|+++||+... + ..++.++|||+.... ....+++++|+++||||+|++... .+
T Consensus 160 ~~d~e~~l~~~d~~~~~-----------g---~~~~~~~iNG~~~~~------~~~~l~v~~Ge~vr~~l~N~g~~~~~H 219 (288)
T 3gdc_A 160 PADDEMVMVMNGYNTDG-----------G---DDNEFYSVNGLPFHF------MDFPVKVKQHELVRIHLINVLEYDPIN 219 (288)
T ss_dssp CCSEEEEEEEEEECCSS-----------T---TCCSEEEETTSTTHH------HHSCEEEETTCCEEEEEEECCCSSSEE
T ss_pred CCcceEEEEEeeEecCC-----------C---CCcceEEECcccccc------cCcccccCCCCEEEEEEEeCCCCCcce
Confidence 45799999999998762 1 246789999996410 124689999999999999999654 78
Q ss_pred EEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeee
Q 013075 156 FFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 156 ~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~ 210 (450)
.|+|+||.|.|++.++....|...|++.|+||||++|+++++ .||.|.++|+..
T Consensus 220 ~fHlhG~~f~v~~~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~-~pG~~~~hCH~~ 273 (288)
T 3gdc_A 220 SFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFP-YPGKFMFHAHKT 273 (288)
T ss_dssp EEEETTCCEEEEETTCCSSCSEEESEEEEETTCEEEEEECCC-SCEEEEEECSSH
T ss_pred eEEEcCCEEEEEcCCCccCCCceeeEEEeCCCceEEEEEECC-CCEEEEEEecCh
Confidence 999999999999844433457899999999999999999999 579999999864
No 24
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=6.9e-36 Score=304.77 Aligned_cols=208 Identities=21% Similarity=0.281 Sum_probs=166.9
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccCh---hhhh-cceeEEEEEecCCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHS---RWLR-ATVYGALIVYPRMGSPYPFP 76 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~---~~~~-~Gl~G~liV~~~~~~~~~~~ 76 (450)
++|||||+++ +||++..+ +|+||++++|+|++ +++||||||||. ..|. +||+|+|||++++.. +
T Consensus 84 ~~iH~HG~~~-----~dG~~~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~ 151 (442)
T 2zoo_A 84 HNIDLHAVTG-----PGGGAESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----A 151 (442)
T ss_dssp BCCEETTCCS-----GGGGGGGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----C
T ss_pred CCEEecCCcC-----CCCCCccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----C
Confidence 4799999874 78987754 59999999999997 889999999974 4565 499999999987542 2
Q ss_pred CCCCceeEEEeeeecCChHHH-----HHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCC
Q 013075 77 MPKREIPILIGEWWDRDPMDV-----LRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAM 151 (450)
Q Consensus 77 ~~~~e~~l~l~d~~~~~~~~~-----~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~ 151 (450)
.+|+|++|+++||++...... +...... ..++++++|||+..... ..+.+++++|++|||||+|+|.
T Consensus 152 ~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~liNG~~~~~~-----~~~~l~v~~G~~vrlrliN~~~ 223 (442)
T 2zoo_A 152 PVDREYYLVQGDFYTKGEFGEAGLQPFDMAKAI---DEDADYVVFNGSVGSTT-----DENSLTAKVGETVRLYIGNGGP 223 (442)
T ss_dssp CCSEEEEEEEEEECBSSCTTCCEEECBCHHHHH---TTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEEEES
T ss_pred CCCceEEEEeeeeeccCcccccccccCChhHhc---cCCCCEEEECCCcCCCC-----CCCceEeCCCCEEEEEEEeCCC
Confidence 568999999999998754100 0000001 13678999999964211 1258999999999999999998
Q ss_pred CceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccC
Q 013075 152 NQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSA 231 (450)
Q Consensus 152 ~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~ 231 (450)
...+.|+|+||.|+||+.||.+++|..++.+.|.||||+||+|++++ +|.|+++++.+... ......++|+|.+.
T Consensus 224 ~~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~-~G~y~~~~~~~~~~----~~~g~~a~l~v~~~ 298 (442)
T 2zoo_A 224 NLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEV-PGTFILVDHSIFRA----FNKGALAMLKVEGP 298 (442)
T ss_dssp SCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECCS-CEEEEEEESSTHHH----HTTSCEEEEEEESC
T ss_pred CCceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcCC-CCeEEEEecccccc----cccCceEEEEecCC
Confidence 88999999999999999999999999999999999999999999995 79999999865431 12356899999876
Q ss_pred CC
Q 013075 232 PF 233 (450)
Q Consensus 232 ~~ 233 (450)
..
T Consensus 299 ~~ 300 (442)
T 2zoo_A 299 DD 300 (442)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 25
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=6.2e-36 Score=290.69 Aligned_cols=184 Identities=18% Similarity=0.304 Sum_probs=150.2
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeC------------CceeeeeeccChhhh------h-cceeE
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIE------------DQEGTLWWHAHSRWL------R-ATVYG 61 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~------------~~~Gt~wYH~H~~~~------~-~Gl~G 61 (450)
|||||||+++.. .|||++ .+||+|+||++|+|+|++. .++||||||||...+ . +||+|
T Consensus 64 ~siH~HG~~~~~--~~dG~~-~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G 140 (313)
T 3tas_A 64 VSLHVHGLDYEI--SSDGTK-QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYG 140 (313)
T ss_dssp BCCEESSSBCCG--GGSCST-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEE
T ss_pred ccEeecCCcCCc--cCCCCc-cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccC
Confidence 689999999865 499998 6899999999999999762 367999999998654 3 49999
Q ss_pred EEEEecCCCCCCCCCCCCCceeEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCE
Q 013075 62 ALIVYPRMGSPYPFPMPKREIPILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGET 141 (450)
Q Consensus 62 ~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~ 141 (450)
+|||+++.+. .+|+|++|+++||+ +||+.. ...+.+.++.|++
T Consensus 141 ~liV~~~~~~-----~~d~e~~l~~~d~t-------------------------~Ng~~~-------~~~~~l~v~~Ge~ 183 (313)
T 3tas_A 141 PVIVRRKGDV-----LPDRTHTIVFNDMT-------------------------INNRPA-------HTGPDFEATVGDR 183 (313)
T ss_dssp EEEEECTTCB-----CCSEEEEEEEETTE-------------------------ETTCCT-------TCCCCEEEETTCE
T ss_pred ceEeeccccc-----cccccceeeccchh-------------------------cccCCc-------ccccccccccCCE
Confidence 9999998753 35899999999974 556543 2236799999999
Q ss_pred EEEEEEecCCCceEEEEEeCcceEEEEeCCCcc---CceeecEEEecCCCeEEEEEEeCC--CCceeEEEeeeecccccc
Q 013075 142 ILLRIINSAMNQEHFFGVANHKLTVVGVDTSYT---KPFPTSVIMIAPGQTTNVLLTADQ--PPARYYMAAHAYNTANAA 216 (450)
Q Consensus 142 ~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v---~P~~~~~i~l~~G~R~dv~v~~~~--~~g~y~l~~~~~~~~~~~ 216 (450)
+||||+|++ ...+.|+|+||.|+|++.||... .|..+|++.|.||||++++|.+.+ .||.|.++|+...-..
T Consensus 184 vr~~liN~g-~~~hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~~-- 260 (313)
T 3tas_A 184 VEFVMITHG-EYYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSD-- 260 (313)
T ss_dssp EEEEEEEES-SCCEEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHH--
T ss_pred EEEEEeccc-ccceeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHHH--
Confidence 999999999 46788999999999999999876 367899999999999999998865 4799999999643211
Q ss_pred CCCccEEEEEEecc
Q 013075 217 FDNTTTTAILEYKS 230 (450)
Q Consensus 217 ~~~~~~~ail~y~~ 230 (450)
....+++..+.
T Consensus 261 ---~GM~~~f~V~~ 271 (313)
T 3tas_A 261 ---MGMVGLFLVKK 271 (313)
T ss_dssp ---TTCEEEEEEEC
T ss_pred ---CCCeEEEEEEC
Confidence 23456666554
No 26
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.1e-35 Score=330.80 Aligned_cols=328 Identities=14% Similarity=0.112 Sum_probs=209.1
Q ss_pred eeeccCCCCCC-CCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChhhhh-cceeEEEEEecCCCCCCCCCCCC
Q 013075 2 SLFRHGVHQTR-NPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLR-ATVYGALIVYPRMGSPYPFPMPK 79 (450)
Q Consensus 2 ~iH~HG~~~~~-~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~ 79 (450)
.+||||++|.+ +.|+||++.+| |+|.||.+|+|+|.+ .++||||||||...|+ +||+|+|+|++......++..++
T Consensus 652 ~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd 729 (1065)
T 2j5w_A 652 EADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-DTEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYL 729 (1065)
T ss_dssp TTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-CSCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCS
T ss_pred cceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-CCCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCC
Confidence 48999999998 99999999999 999999999999987 7999999999999988 49999999998755444444678
Q ss_pred CceeEEE----eeeecCChHHHHHHhhh-cCCCCCCCCceeeCCcccC----------------CCCC----------CC
Q 013075 80 REIPILI----GEWWDRDPMDVLRQALF-TGGAPNISDALTINGQPGD----------------LYRC----------SS 128 (450)
Q Consensus 80 ~e~~l~l----~d~~~~~~~~~~~~~~~-~~~~~~~~~~~liNG~~~~----------------~~~~----------~~ 128 (450)
.|++++| +||++.....+...... .+.. +..+++|+.... .+.. ..
T Consensus 730 ~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~~~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~ 806 (1065)
T 2j5w_A 730 GERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNAFLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLG 806 (1065)
T ss_dssp EEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCTTTCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGT
T ss_pred cceEEEEeeeeccccCCcchhhhhhccCCCccC---ccceeecCCCccccceEeeeEEEEEcCCcceecccCCccccccC
Confidence 8999999 99999887765443322 2222 455556653210 0111 01
Q ss_pred CceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCC---------
Q 013075 129 KETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQP--------- 199 (450)
Q Consensus 129 ~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~--------- 199 (450)
-..|+|++++|+++|+||.|.. ...+.++.+| +++.+.+ ...+.||++++..+.+.+.
T Consensus 807 ~pGP~I~v~~Gd~v~v~l~N~~-~~~~sih~HG--l~~~~~~----------~~~i~PG~~~ty~~~~~~~~gp~~~~~~ 873 (1065)
T 2j5w_A 807 ILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHG--VQTESST----------VTPTLPGETLTYVWKIPERSGAGTEDSA 873 (1065)
T ss_dssp TSCCCEEEETTEEEEEEEEECS-SSCBCCEESS--CBCSCSC----------CCCBCTTCEEEEEEECCGGGSCCTTSCS
T ss_pred CCCCEEEEecCCEEEEEEEeCC-CCCceEeecc--ccccCCC----------CceeCCCCeEEEEEEecCccCCccccCC
Confidence 2348999999999999999996 4555555555 5543321 1256799998888887642
Q ss_pred CceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccccCCCCcccc
Q 013075 200 PARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQVQVPTVID 279 (450)
Q Consensus 200 ~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d 279 (450)
+|.||.+.+.... ......+. +.|....... ... ... +...|
T Consensus 874 ~gt~wYhsh~~~~-~q~~~GL~--G~liV~~~~~--------l~~---~~~------------------------~~d~D 915 (1065)
T 2j5w_A 874 CIPWAYYSTVDQV-KDLYSGLI--GPLIVCRRPY--------LKV---FNP------------------------RRKLE 915 (1065)
T ss_dssp EEEEEEECCTTHH-HHHHTTCE--EEEEEECCC----------------CC------------------------CCEEE
T ss_pred ceEEEEecCCChH-Hhhhcccc--ceeEecCccc--------ccc---cCC------------------------CcceE
Confidence 2589998774210 00111222 3233322111 000 000 00011
Q ss_pred eeEEEEeccceec-----------cCCC--CCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCC
Q 013075 280 ENLFFTVGLGLIN-----------CSNP--NSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVP 346 (450)
Q Consensus 280 ~~~~~~~~~~~~~-----------~~~~--~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~ 346 (450)
..+.+.. +.... ...+ ..............|+|||..|.
T Consensus 916 ~~l~~~~-~d~~~~~y~~~n~~~~~~~P~~v~~~~~~~~~~~~~~~iNG~~~~--------------------------- 967 (1065)
T 2j5w_A 916 FALLFLV-FDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHAINGRMFG--------------------------- 967 (1065)
T ss_dssp EEEEEEE-EEGGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHTEEEEETTBCTT---------------------------
T ss_pred EEEEEEe-ecCCcceeeccCcccccCCccccCcchhhhhccCceEEECCccCC---------------------------
Confidence 1111110 00000 0000 00000000000113455554332
Q ss_pred CcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCC
Q 013075 347 PIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDP 426 (450)
Q Consensus 347 p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P 426 (450)
....+.++.|++|+|+|.|.+. ..+.||||||||+|+|++++ |
T Consensus 968 -------------------~~~~~~v~~G~~vr~~l~N~g~-~~~~HpfHlHG~~F~vv~~~-----------------p 1010 (1065)
T 2j5w_A 968 -------------------NLQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFHGHSFQYKHRG-----------------V 1010 (1065)
T ss_dssp -------------------CCCCCEEETTCEEEEEEEECCS-TTCCEEEEESSCCEEETTTT-----------------C
T ss_pred -------------------CCccEEeCCCCEEEEEEEeCCC-CCcceeEEEcccEEEEEecC-----------------C
Confidence 1235789999999999999752 34689999999999999863 6
Q ss_pred CccceEEeCCCCEEEEEEEccCCC
Q 013075 427 PRRNTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 427 ~~RDTv~vp~~g~~viRf~adNPG 450 (450)
.+||||.|+++++++|||+|||||
T Consensus 1011 ~~~DTv~v~pg~~~~v~~~ad~pG 1034 (1065)
T 2j5w_A 1011 YSSDVFDIFPGTYQTLEMFPRTPG 1034 (1065)
T ss_dssp EEESEEEECTTCEEEEEECCCSCE
T ss_pred ceeeEEEECCCCeEEEEEECCCCe
Confidence 699999999999999999999998
No 27
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=6.5e-35 Score=298.16 Aligned_cols=312 Identities=17% Similarity=0.130 Sum_probs=187.1
Q ss_pred CcccCCCCCCCeEEEEEEeCCceeeeeeccChhhhhc-ceeEEEEEecCCCCCCCC--C---CCCCceeEEEeeeecCCh
Q 013075 21 YVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRA-TVYGALIVYPRMGSPYPF--P---MPKREIPILIGEWWDRDP 94 (450)
Q Consensus 21 ~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~--~---~~~~e~~l~l~d~~~~~~ 94 (450)
..+||+|+||++++|+|++ .++||||||||...+++ ||+|+|+|+++....+.. . ....++...+ |+.....
T Consensus 86 ~~~~~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~ 163 (447)
T 2dv6_A 86 ARSAIVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKT 163 (447)
T ss_dssp EECCCBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCE
T ss_pred cccceecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcE
Confidence 4579999999999999997 67999999999988885 999999999876532200 0 0000111000 1100000
Q ss_pred HHH-HH-HhhhcCC-CCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCC-CceEEEEEeCcceEEEEeC
Q 013075 95 MDV-LR-QALFTGG-APNISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAM-NQEHFFGVANHKLTVVGVD 170 (450)
Q Consensus 95 ~~~-~~-~~~~~~~-~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~via~D 170 (450)
..+ +. ....... .....+.+++||+.. .+++++++|+++||||+|.+. ...+.++++| + ++.|
T Consensus 164 ~~~~l~~~~~~~~~~~g~~~~~~~~NG~~p---------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg--~--~~~D 230 (447)
T 2dv6_A 164 VRIDLETVEVKGQLDDNTTYTYWTFNGKVP---------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHG--A--TGPG 230 (447)
T ss_dssp EEEEEEEEEEEEEEETTEEEEEEEETTBBS---------CCCEEEETTCEEEEEEEECTTCSSCBCCEETT--C--CSGG
T ss_pred EEEEEEEEEEEEeccCCceeEEEEECCccC---------CCeEEecCCCEEEEEEEeCCCCceeEEEeecc--c--cCCC
Confidence 000 00 0000000 012345789999852 389999999999999999985 2345555555 3 3689
Q ss_pred CCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCC
Q 013075 171 TSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPIL 250 (450)
Q Consensus 171 G~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~ 250 (450)
|.+ +.+.|.||||+++++++++ +|.||++++......... ....+.|.+..... +|
T Consensus 231 G~~------~~~~i~pG~~~~~~~~~~~-~G~~~yh~h~~~~~~~~~--~Gl~g~l~v~~~~~-------------~P-- 286 (447)
T 2dv6_A 231 GAA------AFTQTDPGEETVVTFKALI-PGIYVYHCATPSVPTHIT--NGMYGLLLVEPEGG-------------LP-- 286 (447)
T ss_dssp GGG------GGCCBCTTCEEEEEEECCS-CEEEEEECCSSSHHHHHH--TTCEEEEEEECTTC-------------SC--
T ss_pred CCC------ccEEeCCCCEEEEEEECCC-CeEEEEEeCCCChHHHHh--CCCEEEEEEeCCCC-------------CC--
Confidence 873 2346999999999999996 699999998521100001 12356666653211 11
Q ss_pred CCCCCccchhhhhhcccccc-cCCCCcccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHH
Q 013075 251 PGFNDTATATAFTARIKSLH-QVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQA 329 (450)
Q Consensus 251 p~~~~~~~~~~~~~~l~~l~-p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~ 329 (450)
...+.. ...+.... ..... .... +.+...... ......|.|||+.+...
T Consensus 287 -~~d~~~-----~~~~~~~~~~~~~~--~~g~--~~~~~~~~~------------~~~~~~~~iNG~~~~~~-------- 336 (447)
T 2dv6_A 287 -QVDREF-----YVMQGEIYTVKSFG--TSGE--QEMDYEKLI------------NEKPEYFLFNGSVGSLT-------- 336 (447)
T ss_dssp -CCSEEE-----EEEEEEECBSSCTT--CCEE--CCBBHHHHH------------TTCCSEEEETTSTTCCC--------
T ss_pred -CCCeeE-----EEEecccccCCccc--cccc--ccCChHHhh------------ccCCCEEEECCcccCCC--------
Confidence 111100 00011100 00000 0000 000000000 11123577888765311
Q ss_pred HHhCCCCCccCCCCCCCCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecC
Q 013075 330 YIQGQPGIFTTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGL 409 (450)
Q Consensus 330 ~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~ 409 (450)
....+.++.|++|+|+|.|.+ ....||||||||+|+||+..
T Consensus 337 ------------------------------------~~~~~~v~~g~~vrlrliN~~--~~~~h~~hlhGh~f~vv~~d- 377 (447)
T 2dv6_A 337 ------------------------------------RSHPLYASVGETVRIFFGVGG--PNFTSSFHVIGEIFDHVYSL- 377 (447)
T ss_dssp ------------------------------------CCCCEEECTTCEEEEEEEEEE--SSCCEEEEEETCCEEEECGG-
T ss_pred ------------------------------------CCcceEECCCCEEEEEEEeCC--CCceEeEEEcCcEEEEEEcC-
Confidence 013578999999999999975 24689999999999999985
Q ss_pred CCCCCCCCCCCCCCCCCC-ccceEEeCCCCEEEEEEEccCCC
Q 013075 410 GNFNPSTDTAKFNLIDPP-RRNTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 410 G~~~~~~~~~~~n~~~P~-~RDTv~vp~~g~~viRf~adNPG 450 (450)
|.+ +.+|. +|||+.|+++++++|+|++||||
T Consensus 378 G~~----------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG 409 (447)
T 2dv6_A 378 GSV----------VSPPLIGVQTVSVPPGGATIVDFKIDRAG 409 (447)
T ss_dssp GCS----------SSCCEEEESEEEECTTEEEEEEEECCSCE
T ss_pred Ccc----------cCCCcccccEEEECCCcEEEEEEECCCCE
Confidence 221 12344 69999999999999999999997
No 28
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=1.6e-34 Score=283.81 Aligned_cols=216 Identities=18% Similarity=0.189 Sum_probs=160.2
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChh-----hhhc-ceeEEEEEecCCCCC--
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSR-----WLRA-TVYGALIVYPRMGSP-- 72 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~-----~~~~-Gl~G~liV~~~~~~~-- 72 (450)
|++||||+++.....+||.++++| |+||++|+|+|++ +++||||||||.+ .|++ ||+|+|||+++...+
T Consensus 83 ~~~h~Hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~ 159 (333)
T 1mzy_A 83 ENTMPHNIDFHAATGALGGGGLTL--INPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDH 159 (333)
T ss_dssp TCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCT
T ss_pred CCcccccceecCCCCCCCCCceeE--eCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCcccc
Confidence 579999999877655677777776 9999999999997 7899999999997 3664 999999999765321
Q ss_pred --CCCCCCCCceeEEEeeeecC--ChHHH---------HHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCC
Q 013075 73 --YPFPMPKREIPILIGEWWDR--DPMDV---------LRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAG 139 (450)
Q Consensus 73 --~~~~~~~~e~~l~l~d~~~~--~~~~~---------~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G 139 (450)
.+. .+|+|++|+++||++. ....+ +....... ....++.++|||+...+. ..+.++|++|
T Consensus 160 ~~~p~-~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ING~~~~~~-----~~~~l~v~~G 232 (333)
T 1mzy_A 160 EGKPV-RYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVM-DTLIPSHIVFNGAVGALT-----GEGALKAKVG 232 (333)
T ss_dssp TSCBC-CCSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHHH-TTTCCSEEEETTSTTTTS-----GGGCEEEETT
T ss_pred ccCCC-ccchheeeeeeeeccCccccccccccccccccccchhHHh-hccCCcEEEECCcccccC-----CCcceEecCC
Confidence 122 4689999999999883 11100 00000000 114678999999974221 1367999999
Q ss_pred CEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCc-e-eecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccccC
Q 013075 140 ETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKP-F-PTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANAAF 217 (450)
Q Consensus 140 ~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P-~-~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~ 217 (450)
|+||||++|++....+. .+++|.|+|++ ||.++++ . .++++.|+||||+||+|++++ +|+|+++|+......
T Consensus 233 er~Rl~n~~~~~~~~~h-~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG~y~~~ch~~~h~~--- 306 (333)
T 1mzy_A 233 DNVLFVHSQPNRDSRPH-LIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PGVYAYVNHNLIEAV--- 306 (333)
T ss_dssp CEEEEEEEESSSCBCEE-EETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHH---
T ss_pred CEEEEEECCCCCccccE-EECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CEEEEEecChhhhHh---
Confidence 99888777665443343 38899999999 9999964 4 589999999999999999996 799999999754320
Q ss_pred CCccEEEEEEeccCCC
Q 013075 218 DNTTTTAILEYKSAPF 233 (450)
Q Consensus 218 ~~~~~~ail~y~~~~~ 233 (450)
.....++++|.+...
T Consensus 307 -~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 307 -HKGATAHVLVEGEWD 321 (333)
T ss_dssp -TTCCEEEEEEESCCC
T ss_pred -hCCCEEEEEEcCCCC
Confidence 134678999987543
No 29
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=7.9e-35 Score=280.79 Aligned_cols=184 Identities=20% Similarity=0.334 Sum_probs=148.7
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeC------------CceeeeeeccChhhh------h-cceeE
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIE------------DQEGTLWWHAHSRWL------R-ATVYG 61 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~------------~~~Gt~wYH~H~~~~------~-~Gl~G 61 (450)
|||||||+++.+ +|||++ ++||+|+||++|+|+|++. .++||||||||..++ . .||+|
T Consensus 80 ~siH~HG~~~~~--~~DG~~-~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G 156 (299)
T 3t9w_A 80 LSLHPHGVDYDV--NSDGTL-MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYG 156 (299)
T ss_dssp BCCEESSSBCCG--GGSCCT-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEE
T ss_pred ccEEeCCcccCC--ccCCCc-cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccc
Confidence 689999999865 599997 8999999999999999873 268999999998653 3 39999
Q ss_pred EEEEecCCCCCCCCCCCCCceeEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCE
Q 013075 62 ALIVYPRMGSPYPFPMPKREIPILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGET 141 (450)
Q Consensus 62 ~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~ 141 (450)
+|||+++.+. ..|+|++|++++|+ +||+.. ...+.+.++.|++
T Consensus 157 ~liV~~~~~~-----~~d~e~~l~~~~~~-------------------------~Ng~~~-------~~~p~l~v~~Ge~ 199 (299)
T 3t9w_A 157 ALVVRRQGDL-----LPKRQFTVVFNDMM-------------------------INNRAH-------HDAPTFEANLGER 199 (299)
T ss_dssp EEEEECTTCC-----CCSEEEEEEEETTE-------------------------ETTCCT-------TCCCEEEEETTCE
T ss_pred eEEEeccccc-----Cccccceeeeeeee-------------------------ecCccc-------cccccceecCCCE
Confidence 9999998753 35899999998764 677653 2347899999999
Q ss_pred EEEEEEecCCCceEEEEEeCcceEEEEeCCCccC---ceeecEEEecCCCeEEEEEEeCC--CCceeEEEeeeecccccc
Q 013075 142 ILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTK---PFPTSVIMIAPGQTTNVLLTADQ--PPARYYMAAHAYNTANAA 216 (450)
Q Consensus 142 ~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~---P~~~~~i~l~~G~R~dv~v~~~~--~~g~y~l~~~~~~~~~~~ 216 (450)
+||||+|++. ....|+|+||.|.|+..|+.... +..+|.+.|.||||++++|.+.+ .||.|.++|+...-..
T Consensus 200 Vr~~liN~~~-~~HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~~-- 276 (299)
T 3t9w_A 200 VEWIAIGHGS-NFHTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHSD-- 276 (299)
T ss_dssp EEEEEEEESS-CCCEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHHH--
T ss_pred EEEEEEeccc-cceeeeEecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHHh--
Confidence 9999999995 56789999999999999988764 34689999999999999998664 4799999999643211
Q ss_pred CCCccEEEEEEecc
Q 013075 217 FDNTTTTAILEYKS 230 (450)
Q Consensus 217 ~~~~~~~ail~y~~ 230 (450)
....+++...+
T Consensus 277 ---~GM~~~f~V~~ 287 (299)
T 3t9w_A 277 ---MGMAGMFLVRN 287 (299)
T ss_dssp ---TTCEEEEEEEC
T ss_pred ---cCCeEEEEEEC
Confidence 23455555544
No 30
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.5e-34 Score=276.23 Aligned_cols=168 Identities=19% Similarity=0.299 Sum_probs=143.5
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCC------------ceeeeeeccChh------hhh-cceeE
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIED------------QEGTLWWHAHSR------WLR-ATVYG 61 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~------------~~Gt~wYH~H~~------~~~-~Gl~G 61 (450)
|||||||+++.. ++||++ +|||+|+||++|+|+|++.+ ++||||||||.+ .|. +||+|
T Consensus 58 ~siH~HG~~~~~--~~DG~~-~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G 134 (276)
T 3kw8_A 58 ASLHVHGLDYEI--SSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYG 134 (276)
T ss_dssp BCCEESSSBCCG--GGSCCT-TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEE
T ss_pred ccEeecCcccCC--ccCCCc-CCcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEE
Confidence 689999999976 599999 99999999999999999843 379999999985 355 49999
Q ss_pred EEEEecCCCCCCCCCCCCCceeEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCE
Q 013075 62 ALIVYPRMGSPYPFPMPKREIPILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGET 141 (450)
Q Consensus 62 ~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~ 141 (450)
+|||+++.+. ..|+|++|+++|| +|||+.. ...+.++++.|++
T Consensus 135 ~liV~~~~~~-----~~drE~~l~l~~~-------------------------~iNG~~~-------~~~p~i~v~~G~~ 177 (276)
T 3kw8_A 135 PVIVRRKGDV-----LPDATHTIVFNDM-------------------------TINNRKP-------HTGPDFEATVGDR 177 (276)
T ss_dssp EEEEECTTCC-----CCSEEEEEEEETT-------------------------EETTCCT-------TCCCCEEEETTCE
T ss_pred EEEEecCCCc-----ccccceEEEeccc-------------------------ccceecc-------cCCCCEEEecCCE
Confidence 9999998753 2389999998764 7999864 1358899999999
Q ss_pred EEEEEEecCCCceEEEEEeCcceEEEEeCCCccC----ceeecEEEecCCCeEEEEEEeCC--CCceeEEEeeee
Q 013075 142 ILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTK----PFPTSVIMIAPGQTTNVLLTADQ--PPARYYMAAHAY 210 (450)
Q Consensus 142 ~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~~~i~l~~G~R~dv~v~~~~--~~g~y~l~~~~~ 210 (450)
+||||+|.+. ..+.|+++||.|.+++ ||.... +..+|++.|.|||++++++++++ .||.|+++|+..
T Consensus 178 vri~l~N~~~-~~Hp~HlHG~~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~ 250 (276)
T 3kw8_A 178 VEIVMITHGE-YYHTFHMHGHRWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQ 250 (276)
T ss_dssp EEEEEEEESS-CCEEEEETTCCEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred EEEEEecCCC-cceeEEEccceeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCc
Confidence 9999999996 5889999999999875 775432 46789999999999999999986 589999999964
No 31
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=2.7e-34 Score=282.55 Aligned_cols=214 Identities=22% Similarity=0.238 Sum_probs=160.4
Q ss_pred eeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChhh----hh-cceeEEEEEecCCCCC----
Q 013075 2 SLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRW----LR-ATVYGALIVYPRMGSP---- 72 (450)
Q Consensus 2 ~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~---- 72 (450)
++||||+++.+.+++||.+.++| |+||++|+|+|++ +++||||||||.++ |. +||+|+|||+++....
T Consensus 85 ~~~~h~~~~h~~~~~~~~~~~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~ 161 (336)
T 1oe1_A 85 NAMPHNVDFHGATGALGGAKLTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQG 161 (336)
T ss_dssp CCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTS
T ss_pred CCccccceECCCCCCCCCcceEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCccccc
Confidence 57999999988888888888876 9999999999997 78999999999863 55 4999999999875422
Q ss_pred CCCCCCCCceeEEEeeeecCCh--HHH---------HHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCE
Q 013075 73 YPFPMPKREIPILIGEWWDRDP--MDV---------LRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGET 141 (450)
Q Consensus 73 ~~~~~~~~e~~l~l~d~~~~~~--~~~---------~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~ 141 (450)
.+. .+|+|++|+++||++... ..+ +...... .....++.++|||+.....+ .+.+.|++|++
T Consensus 162 ~~~-~~D~e~~l~~~D~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~~-----~~~l~v~~Ger 234 (336)
T 1oe1_A 162 KPL-HYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALTG-----ANALTAKVGET 234 (336)
T ss_dssp CBC-CCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTSG-----GGCEEEETTCE
T ss_pred Ccc-cCCceeEeeeeeeeeccccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCCC-----CcceEcCCCCE
Confidence 122 468999999999998411 100 0000000 00136789999999752211 27899999997
Q ss_pred EEEEEEecCCCceEEE-EEeCcceEEEEeCCCccCce--eecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccccCC
Q 013075 142 ILLRIINSAMNQEHFF-GVANHKLTVVGVDTSYTKPF--PTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANAAFD 218 (450)
Q Consensus 142 ~rlRliN~~~~~~~~~-~i~gh~~~via~DG~~v~P~--~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~~ 218 (450)
||| +|++....+.+ .|++|.|+|++ ||.+++|. .++.+.|++|||+||+|++++ +|.|+++++..... .
T Consensus 235 vRl--in~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~----~ 306 (336)
T 1oe1_A 235 VLL--IHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEA----F 306 (336)
T ss_dssp EEE--EEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----H
T ss_pred EEE--EecCCCCccceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhcc----c
Confidence 765 66666666554 46999999997 99999764 478999999999999999996 79999999864321 0
Q ss_pred CccEEEEEEeccCCC
Q 013075 219 NTTTTAILEYKSAPF 233 (450)
Q Consensus 219 ~~~~~ail~y~~~~~ 233 (450)
.....|+++|++...
T Consensus 307 ~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 307 ELGAAGHIKVEGKWN 321 (336)
T ss_dssp TTSCEEEEEEESCCC
T ss_pred cCCCeEEEEECCCCC
Confidence 134689999987554
No 32
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=1.4e-34 Score=308.02 Aligned_cols=193 Identities=18% Similarity=0.259 Sum_probs=139.7
Q ss_pred CeeeccCCCCCCCCCCCCCCCcc--------cCCCCCCCeEEEEEEeCCc-----ee----eeeeccChhh--hhc-cee
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVT--------QCPIQPGRSYTYRFTIEDQ-----EG----TLWWHAHSRW--LRA-TVY 60 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~t--------q~~i~pg~~~~Y~f~~~~~-----~G----t~wYH~H~~~--~~~-Gl~ 60 (450)
|+|||||+++.. +|||+|+++ ||+|+||++|+|+|+++++ +| |||||||.+. |++ ||+
T Consensus 91 ~siH~HGl~~~~--~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~~q~~~GL~ 168 (647)
T 1sdd_B 91 YSLHAHGLSYEK--SSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLI 168 (647)
T ss_dssp BCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCE
T ss_pred eEEecCcceeCC--CCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCcccccccCc
Confidence 689999999864 599999987 9999999999999998543 57 9999999964 554 999
Q ss_pred EEEEEecCCCCCC--CCCCCCCceeEEEe------eeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCCCcee
Q 013075 61 GALIVYPRMGSPY--PFPMPKREIPILIG------EWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSSKETV 132 (450)
Q Consensus 61 G~liV~~~~~~~~--~~~~~~~e~~l~l~------d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~ 132 (450)
|+|||+++..... ..+..++|++|+|+ ||+++............ .....++.++|||+.. ..+
T Consensus 169 G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~--------~~p 239 (647)
T 1sdd_B 169 GPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASS-EVKNSHEFHAINGMIY--------NLP 239 (647)
T ss_dssp EEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSS--------CCC
T ss_pred cCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCc-chhhcCceeccCCEec--------CCC
Confidence 9999999864321 11234689999999 67776543211000111 1123578899999963 137
Q ss_pred eEEeeCCCEEEEEEEecCCCc-eEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeee
Q 013075 133 RFPVEAGETILLRIINSAMNQ-EHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 133 ~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~ 210 (450)
.+.+++|++|||||+|++... .+.|+++||.|+||+.|| ..++.+.|+||||+||+|++++ +|.|.++++..
T Consensus 240 ~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~~-pG~w~~hch~~ 312 (647)
T 1sdd_B 240 GLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKASK-PGWWLLDTEVG 312 (647)
T ss_dssp CCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECCS-SEEEEEECCCH
T ss_pred CeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEecc-ceEeecccCcc
Confidence 899999999999999999765 889999999999999886 4789999999999999999995 69999999964
No 33
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.3e-35 Score=287.76 Aligned_cols=182 Identities=15% Similarity=0.195 Sum_probs=131.0
Q ss_pred CeeeccCCC----CCCCCCCCCCCCcc--cCCCCCCCeEEEEEEeCCc---------eeeeeeccChhh--hhc-ceeEE
Q 013075 1 MSLFRHGVH----QTRNPWADGPEYVT--QCPIQPGRSYTYRFTIEDQ---------EGTLWWHAHSRW--LRA-TVYGA 62 (450)
Q Consensus 1 t~iH~HG~~----~~~~~~~DGv~~~t--q~~i~pg~~~~Y~f~~~~~---------~Gt~wYH~H~~~--~~~-Gl~G~ 62 (450)
|+|||||++ +.+.+++||+++++ ||+|+||++|+|+|++.++ +||||||||... |.+ ||+|+
T Consensus 82 ~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~ 161 (306)
T 1sdd_A 82 LSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGP 161 (306)
T ss_dssp BCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEE
T ss_pred ccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCCCceEEEEeccCCchhhhccCceEE
Confidence 689999999 44555666666666 7999999999999998433 489999999876 544 99999
Q ss_pred EEEecCCCCC---CCCCCCCCceeEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCC
Q 013075 63 LIVYPRMGSP---YPFPMPKREIPILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAG 139 (450)
Q Consensus 63 liV~~~~~~~---~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G 139 (450)
|||+++.... .+. ..|+|++|+++||....+. ....++.++|||+.. ...+.+++++|
T Consensus 162 liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~~~-----------~~~~~~~~~ING~~~-------~~~p~l~v~~G 222 (306)
T 1sdd_A 162 LLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESKSW-----------NQTSSLMYTVNGYVN-------GTMPDITVCAH 222 (306)
T ss_dssp EEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTSSS-----------SCCCCEEECSSSCCS-------SCCCCCCCCCC
T ss_pred EEEccCCCCCccCCcC-cccceEEEEEEeccccccc-----------ccCCCcceeeCCEec-------CCCcceEEcCC
Confidence 9999875321 111 3678999999998532211 112467899999863 12468999999
Q ss_pred CEEEEEEEecCCC-ceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeee
Q 013075 140 ETILLRIINSAMN-QEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 140 ~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~ 210 (450)
+++||||+|++.. ..+.|+++||.|.+ || ..++++.|.||||+||+|++++ +|.|+++|+..
T Consensus 223 ~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~pger~~v~~~~~~-pG~~~~hch~~ 285 (306)
T 1sdd_A 223 DHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLVSATSTTANMTVSP-EGRWTIASLIP 285 (306)
T ss_dssp ------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEETTCCBC---------CCCCCBCCST
T ss_pred CEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEECCCcEEEEEEEcCC-CeEEEEEeCCh
Confidence 9999999999987 46679999999875 77 3689999999999999999984 79999999864
No 34
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=1.2e-33 Score=278.48 Aligned_cols=215 Identities=18% Similarity=0.242 Sum_probs=155.5
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChh----hhh-cceeEEEEEecCCCCC---
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSR----WLR-ATVYGALIVYPRMGSP--- 72 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~----~~~-~Gl~G~liV~~~~~~~--- 72 (450)
|++||||+++.+...+||.+.++| |+||++|+|+|++ .++||||||||.+ .|+ +||+|+|||++++...
T Consensus 90 ~~~~~hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~ 166 (340)
T 2bw4_A 90 TNTLLHNIDFHAATGALGGGALTQ--VNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEK 166 (340)
T ss_dssp TCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTT
T ss_pred CCCccCcceeCCcCCCCCCccceE--eCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCccccc
Confidence 468999999876655555566665 9999999999998 6899999999986 466 4999999999875311
Q ss_pred -CCCCCCCCceeEEEeeeecC--ChHH---------HHHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCC
Q 013075 73 -YPFPMPKREIPILIGEWWDR--DPMD---------VLRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGE 140 (450)
Q Consensus 73 -~~~~~~~~e~~l~l~d~~~~--~~~~---------~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~ 140 (450)
.+. .+|+|++|+++||++. .... .+...... .....++.++|||+..... ..+.+++++|+
T Consensus 167 ~~p~-~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~~-----~~~~l~v~~G~ 239 (340)
T 2bw4_A 167 GQPL-TYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGALT-----GDHALTAAVGE 239 (340)
T ss_dssp SCEE-CCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTTS-----GGGCEEEETTC
T ss_pred CCCc-CcceeEEEeeeeeeeccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCcc-----CCCceEcCCCC
Confidence 122 4688999999999973 2111 01000000 0013568899999974111 13789999999
Q ss_pred EEEEEEEecCCCceEEE-EEeCcceEEEEeCCCccC-ce-eecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccccC
Q 013075 141 TILLRIINSAMNQEHFF-GVANHKLTVVGVDTSYTK-PF-PTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANAAF 217 (450)
Q Consensus 141 ~~rlRliN~~~~~~~~~-~i~gh~~~via~DG~~v~-P~-~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~ 217 (450)
++||+++|.+ ..+.+ .+++|.|+|++ ||.++. |. .+++|.|++|||+||+|++++ +|+|+++++...+..
T Consensus 240 r~Rl~n~~~~--~~~~~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h~--- 312 (340)
T 2bw4_A 240 RVLVVHSQAN--RDTRPHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEAF--- 312 (340)
T ss_dssp EEEEEEEESS--SCBCEEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHH---
T ss_pred EEEEEECCCC--CccceEEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHHH---
Confidence 8876666554 33333 48899999997 999885 43 589999999999999999996 799999998752110
Q ss_pred CCccEEEEEEeccCCC
Q 013075 218 DNTTTTAILEYKSAPF 233 (450)
Q Consensus 218 ~~~~~~ail~y~~~~~ 233 (450)
.....++++|++...
T Consensus 313 -~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 313 -ELGAAGHFKVTGEWN 327 (340)
T ss_dssp -TTSCEEEEEEESCCC
T ss_pred -hCCCEEEEEECCCCc
Confidence 123578899986544
No 35
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=8.4e-34 Score=304.17 Aligned_cols=192 Identities=13% Similarity=0.136 Sum_probs=150.0
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCC---------ceeeeeeccChhh--hhc-ceeEEEEEecC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIED---------QEGTLWWHAHSRW--LRA-TVYGALIVYPR 68 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~---------~~Gt~wYH~H~~~--~~~-Gl~G~liV~~~ 68 (450)
|+|||||+++..... ||+++ +||+|+||++|+|+|++.+ ++||||||||.+. |.+ ||+|+|||+++
T Consensus 221 ~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~ 298 (770)
T 2r7e_B 221 YSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSGLIGPLLVCHT 298 (770)
T ss_dssp CCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTSCCEEEEEECS
T ss_pred cceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCCceeeEEECCC
Confidence 689999999988753 69998 9999999999999999853 8999999999987 444 99999999998
Q ss_pred CCCCC--CCCCCCCceeEEEee------eecCChHHHHHHhhh-cC----CC---CCCCCceeeCCcccCCCCCCCCcee
Q 013075 69 MGSPY--PFPMPKREIPILIGE------WWDRDPMDVLRQALF-TG----GA---PNISDALTINGQPGDLYRCSSKETV 132 (450)
Q Consensus 69 ~~~~~--~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~~-~~----~~---~~~~~~~liNG~~~~~~~~~~~~~~ 132 (450)
..... .....++|++|++++ ||++..... ... .. .+ ....+.++|||+.. ...+
T Consensus 299 ~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~---~~~~p~~~~~~d~~~~~~~~~~~ING~~~-------~~~~ 368 (770)
T 2r7e_B 299 NTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMER---NCRAPCNIQMEDPTFKENYRFHAINGYIM-------DTLP 368 (770)
T ss_dssp TTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSS---CSCCSSCCCSSSSSSTTTSCEECTTSCTT-------TTCC
T ss_pred cccccccCCCccceEEEEEEeecCccccchhccchhh---cccCccccccCCccccccCCccccCCccC-------CCCC
Confidence 64321 112457899988765 444322100 000 00 00 01245689999863 1246
Q ss_pred eEEeeCCCEEEEEEEecCCCc-eEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeee
Q 013075 133 RFPVEAGETILLRIINSAMNQ-EHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 133 ~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~ 210 (450)
.+.+++|++|||||+|++... .+.|+|+||.|+|++.||. .+|+|.|.||||++|+|++++ ||.|.++++..
T Consensus 369 ~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~-pG~w~~hcH~~ 441 (770)
T 2r7e_B 369 GLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSK-AGIWRVECLIG 441 (770)
T ss_dssp CCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSS-CBCCCBCCCSH
T ss_pred CeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCC-CCceEEEeccc
Confidence 789999999999999998654 7899999999999999974 899999999999999999994 79999999964
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.97 E-value=5.1e-31 Score=269.35 Aligned_cols=205 Identities=22% Similarity=0.289 Sum_probs=162.1
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChh---hhh-cceeEEEEEecCCCCCCCCC
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSR---WLR-ATVYGALIVYPRMGSPYPFP 76 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~---~~~-~Gl~G~liV~~~~~~~~~~~ 76 (450)
++|||||+.+ +||+|..+| |.||++++|.|++ +++||||||||.. .|. .||+|+|+|+++... +
T Consensus 219 ~~ih~Hg~~~-----~DG~~~~~~--i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~~----P 286 (447)
T 2dv6_A 219 HSVDFHGATG-----PGGAAAFTQ--TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGL----P 286 (447)
T ss_dssp BCCEETTCCS-----GGGGGGGCC--BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTCS----C
T ss_pred EEEeeccccC-----CCCCCccEE--eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCCC----C
Confidence 3799999852 799987766 9999999999997 7899999999974 454 499999999987532 2
Q ss_pred CCCCceeEEEeeeecCChHHH-------HHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEec
Q 013075 77 MPKREIPILIGEWWDRDPMDV-------LRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINS 149 (450)
Q Consensus 77 ~~~~e~~l~l~d~~~~~~~~~-------~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~ 149 (450)
.+|+|++++++||++...... ..... + ..++.++|||+...... ...+.+++|++|||||+|+
T Consensus 287 ~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~-----~~~~~v~~g~~vrlrliN~ 356 (447)
T 2dv6_A 287 QVDREFYVMQGEIYTVKSFGTSGEQEMDYEKLI--N---EKPEYFLFNGSVGSLTR-----SHPLYASVGETVRIFFGVG 356 (447)
T ss_dssp CCSEEEEEEEEEECBSSCTTCCEECCBBHHHHH--T---TCCSEEEETTSTTCCCC-----CCCEEECTTCEEEEEEEEE
T ss_pred CCCeeEEEEecccccCCcccccccccCChHHhh--c---cCCCEEEECCcccCCCC-----CcceEECCCCEEEEEEEeC
Confidence 468899999999987532100 00011 1 24678999999752211 2479999999999999999
Q ss_pred CCCceEEEEEeCcceEEEEeCCCccCce--eecEEEecCCCeEEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEE
Q 013075 150 AMNQEHFFGVANHKLTVVGVDTSYTKPF--PTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILE 227 (450)
Q Consensus 150 ~~~~~~~~~i~gh~~~via~DG~~v~P~--~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~ 227 (450)
+....+.|+++||.|+||+.||.++.|. ..|+|.|.+|||++|+|++++ ||.|+|+|+..... .....++++
T Consensus 357 ~~~~~h~~hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~~-pG~~~~hch~~~h~-----~~Gm~~~~~ 430 (447)
T 2dv6_A 357 GPNFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDFKIDR-AGRYILVDHALSRL-----EHGLVGFLN 430 (447)
T ss_dssp ESSCCEEEEEETCCEEEECGGGCSSSCCEEEESEEEECTTEEEEEEEECCS-CEEEEEEESSGGGG-----GGTCCEEEE
T ss_pred CCCceEeEEEcCcEEEEEEcCCcccCCCcccccEEEECCCcEEEEEEECCC-CEEEEEEecCcCcc-----ccCCEEEEE
Confidence 9888999999999999999999999654 589999999999999999995 79999999865432 134589999
Q ss_pred eccCCC
Q 013075 228 YKSAPF 233 (450)
Q Consensus 228 y~~~~~ 233 (450)
|++.+.
T Consensus 431 v~~~~~ 436 (447)
T 2dv6_A 431 VDGPKN 436 (447)
T ss_dssp ECSCSC
T ss_pred EeCCCC
Confidence 986544
No 37
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.97 E-value=2.2e-31 Score=261.36 Aligned_cols=184 Identities=18% Similarity=0.277 Sum_probs=147.8
Q ss_pred CeeeccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCC------------ceeeeeeccChh------hhhc-ceeE
Q 013075 1 MSLFRHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIED------------QEGTLWWHAHSR------WLRA-TVYG 61 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~------------~~Gt~wYH~H~~------~~~~-Gl~G 61 (450)
++|||||+++. .++||++ ++||+|+||++|+|+|++.. ++||||||||.. .|.. ||+|
T Consensus 99 ~sih~HG~~~~--~~~DG~~-~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G 175 (343)
T 3cg8_A 99 ASLHVHGLDYE--ISSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYG 175 (343)
T ss_dssp BCCEESSSBCC--GGGSCCT-TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEE
T ss_pred eeEEecCcccC--CcCCCcc-cccccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeE
Confidence 57999999987 4699999 89999999999999998732 359999999973 4554 9999
Q ss_pred EEEEecCCCCCCCCCCCCCceeEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCCCceeeEEeeCCCE
Q 013075 62 ALIVYPRMGSPYPFPMPKREIPILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSSKETVRFPVEAGET 141 (450)
Q Consensus 62 ~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~ 141 (450)
+|||+++.+. ..|+|++|+++|| +|||+.. ...+.+.++.|++
T Consensus 176 ~~iV~~~~~~-----~pd~e~~l~~~d~-------------------------~iNG~~~-------~~~~~l~v~~Ge~ 218 (343)
T 3cg8_A 176 PVIVRRKGDV-----LPDATHTIVFNDM-------------------------TINNRKP-------HTGPDFEATVGDR 218 (343)
T ss_dssp EEEEECTTCC-----CCSEEEEEEEETT-------------------------EETTCCT-------TCCCCEEEETTCE
T ss_pred EEEEecCCCC-----CCCceEEEEcccc-------------------------eecccCC-------CCCccEEeCCCCE
Confidence 9999988653 2578999999875 6899863 1247899999999
Q ss_pred EEEEEEecCCCceEEEEEeCcceEEEEeCCCccC----ceeecEEEecCCCeEEEEEEeC--CCCceeEEEeeeeccccc
Q 013075 142 ILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTK----PFPTSVIMIAPGQTTNVLLTAD--QPPARYYMAAHAYNTANA 215 (450)
Q Consensus 142 ~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~~~i~l~~G~R~dv~v~~~--~~~g~y~l~~~~~~~~~~ 215 (450)
|||||+|.+. ..+.|+|+||.|+|+ .||.+.. +...|++.|.||||++|+++++ +.||.|+++|+...-.
T Consensus 219 vri~l~N~g~-~~HpfHlHGh~f~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H~-- 294 (343)
T 3cg8_A 219 VEIVMITHGE-YYHTFHMHGHRWADN-RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHS-- 294 (343)
T ss_dssp EEEEEEEESS-CCEEEEETTCCEESS-SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH--
T ss_pred EEEEEEcCCc-cccccEecCcEEEEe-ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCHHHH--
Confidence 9999999995 688999999999997 4676543 3567999999999999999984 3689999999964221
Q ss_pred cCCCccEEEEEEeccC
Q 013075 216 AFDNTTTTAILEYKSA 231 (450)
Q Consensus 216 ~~~~~~~~ail~y~~~ 231 (450)
.....+++.+...
T Consensus 295 ---~~GM~g~~~V~~~ 307 (343)
T 3cg8_A 295 ---DMGMVGLFLVKKP 307 (343)
T ss_dssp ---HTTCEEEEEEECT
T ss_pred ---hccCcEEEEEecC
Confidence 1234666766643
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.97 E-value=2.6e-32 Score=292.22 Aligned_cols=190 Identities=15% Similarity=0.232 Sum_probs=142.5
Q ss_pred CeeeccCCCCCCCCCCC-----CCCCcccCCCCCCCeEEEEEEeCCce---------eeeeeccChhhhh---cceeEEE
Q 013075 1 MSLFRHGVHQTRNPWAD-----GPEYVTQCPIQPGRSYTYRFTIEDQE---------GTLWWHAHSRWLR---ATVYGAL 63 (450)
Q Consensus 1 t~iH~HG~~~~~~~~~D-----Gv~~~tq~~i~pg~~~~Y~f~~~~~~---------Gt~wYH~H~~~~~---~Gl~G~l 63 (450)
|||||||+++. ++|+| |+++++||+|+||++|+|+|++++++ ||||||||.+.+. .||+|+|
T Consensus 474 ~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d~~~gT~wYHsH~~~~~q~~~GL~G~l 552 (742)
T 2r7e_A 474 YNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVNMERDLASGLIGPL 552 (742)
T ss_dssp BCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSSCSCCCCEEECCSSSSSTGGGSCCEEC
T ss_pred cCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccCCCceEEEEecCcchhhhhhccceeeE
Confidence 68999999984 56776 56778899999999999999985544 4999999998754 3999999
Q ss_pred EEecCCCCC-CC-CCCCCCceeEEEeee------ecCChHHHHHHhhh-cC-CC------CCCCCceeeCCcccCCCCCC
Q 013075 64 IVYPRMGSP-YP-FPMPKREIPILIGEW------WDRDPMDVLRQALF-TG-GA------PNISDALTINGQPGDLYRCS 127 (450)
Q Consensus 64 iV~~~~~~~-~~-~~~~~~e~~l~l~d~------~~~~~~~~~~~~~~-~~-~~------~~~~~~~liNG~~~~~~~~~ 127 (450)
||+++.... .. ....|+|++|++++| |+..... .... .. .. .....+++|||+.. |.
T Consensus 553 IV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~~---~~~~~p~~v~~~~~~~~~~~~~~~ING~~~----~~ 625 (742)
T 2r7e_A 553 LICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQ---RFLPNPAGVQLEDPEFQASNIMHSINGYVF----DS 625 (742)
T ss_dssp CCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHHH---HHSSSSSCSCCCCHHHHGGGCCBCTTTTCS----SC
T ss_pred EEcCccccccccCcCCCCceEEEEeeccccccccccccchh---hcccCchhcccccccccccCceeeecCcCC----CC
Confidence 999875321 11 114689999999754 4322111 1110 00 00 00123578999863 21
Q ss_pred CCceeeEEeeCCCEEEEEEEecCCC-ceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEE
Q 013075 128 SKETVRFPVEAGETILLRIINSAMN-QEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMA 206 (450)
Q Consensus 128 ~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~ 206 (450)
. .+.+++|++|||||+|+|+. ..+.|+|+||.|+|+ |..+|+|.|.||||++|+|+++ .||.|+++
T Consensus 626 ---~-~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dtv~l~Pg~~~~v~~~ad-~pG~w~~h 692 (742)
T 2r7e_A 626 ---L-QLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDTLTLFPFSGETVFMSME-NPGLWILG 692 (742)
T ss_dssp ---C-CCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCSSCCCCCSSEECCEECC-CCCCSCCE
T ss_pred ---C-cEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeEEEECCCcEEEEEEEcC-CCeEEEEE
Confidence 2 38999999999999998764 467899999999986 5688999999999999999999 47999999
Q ss_pred eeeec
Q 013075 207 AHAYN 211 (450)
Q Consensus 207 ~~~~~ 211 (450)
|+...
T Consensus 693 cH~~~ 697 (742)
T 2r7e_A 693 CHNSD 697 (742)
T ss_dssp ECCCS
T ss_pred eCCch
Confidence 99753
No 39
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.87 E-value=1.1e-21 Score=192.45 Aligned_cols=220 Identities=20% Similarity=0.222 Sum_probs=140.0
Q ss_pred CCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEe---CCCccCceeecEEEecCC
Q 013075 111 SDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGV---DTSYTKPFPTSVIMIAPG 187 (450)
Q Consensus 111 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~---DG~~v~P~~~~~i~l~~G 187 (450)
...+++||+.. .|+|++++|+++|+||+|.... . .+|+.|.+++.+. ||.+. +....|.||
T Consensus 23 ~~~~~~NG~~p---------GP~I~v~~Gd~v~v~v~N~l~~-~--~siH~HG~~~~~~~~~DGvp~----vtq~~I~PG 86 (339)
T 2zwn_A 23 YKVFGFNGQVP---------GPLIHVQEGDDVIVNVTNNTSL-P--HTIHWHGVHQKGTWRSDGVPG----VTQQPIEAG 86 (339)
T ss_dssp EEEEEETTBSS---------CCEEEEETTCEEEEEEEEESSS-C--BCCEEETCCCTTCGGGSCCBT----TTBCCBCTT
T ss_pred EEEEEECCccC---------CCeEEEECCCEEEEEEEECCCC-C--ccEEeCCCCcCCCcccCCCCc----cccCccCCC
Confidence 45789999842 3899999999999999999853 3 4666677777775 99853 344679999
Q ss_pred CeEEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhccc
Q 013075 188 QTTNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIK 267 (450)
Q Consensus 188 ~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~ 267 (450)
||+++.++++ .+|.||.+++.............+..|+ ..... .. ++.
T Consensus 87 ~~~~y~f~~~-~~Gt~wyH~H~~~~~q~~~~Gl~G~liV--~p~~~---------~~--~~~------------------ 134 (339)
T 2zwn_A 87 DSYTYKFKAD-RIGTLWYHCHVNVNEHVGVRGMWGPLIV--DPKQP---------LP--IEK------------------ 134 (339)
T ss_dssp CEEEEEEECC-SCEEEEEECCSSHHHHTTTSCCEEEEEE--ECSSC---------CT--TGG------------------
T ss_pred CeEEEEEECC-CCEEEEEEecCCchhhhhcCCceEeEEe--cCCCc---------cc--ccc------------------
Confidence 9999999998 4799999988532100000222233333 21111 00 000
Q ss_pred ccccCCCCcccceeEEEEec-cceeccCCCCCCCccCCCC-CeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCC
Q 013075 268 SLHQVQVPTVIDENLFFTVG-LGLINCSNPNSPRCQGPNG-TRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPV 345 (450)
Q Consensus 268 ~l~p~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~ 345 (450)
..|+.+.+.++ ........ ... .+..+ ..-.|+|||+.+..
T Consensus 135 ---------~~d~e~~l~l~d~~~~~~~~-~~~--~g~~~~~~~~~~ING~~~~~------------------------- 177 (339)
T 2zwn_A 135 ---------RVTKDVIMMMSTWESAVADK-YGE--GGTPMNVADYFSVNAKSFPL------------------------- 177 (339)
T ss_dssp ---------GCSEEEEEEEEEECGGGTTC-TTC--CCSTTSCCCEEEETTBCTTS-------------------------
T ss_pred ---------cCCceEEEEeeheecccccc-cCC--CCCCccccceEEEccccCCC-------------------------
Confidence 01111111110 00000000 000 00000 12357788875520
Q ss_pred CCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCC
Q 013075 346 PPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLID 425 (450)
Q Consensus 346 ~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~ 425 (450)
...+.++.|++|+|.|.|.+ ...||||||||+|+||+...+ ++.+
T Consensus 178 ---------------------~~~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~DG~-----------~~~~ 222 (339)
T 2zwn_A 178 ---------------------TQPLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKDGL-----------PLDS 222 (339)
T ss_dssp ---------------------SCCEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEETTE-----------EEEE
T ss_pred ---------------------cccEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeCCe-----------ecCC
Confidence 12578899999999999976 458999999999999998311 2234
Q ss_pred CCccceEEeCCCCEEEEEEEccCCC
Q 013075 426 PPRRNTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 426 P~~RDTv~vp~~g~~viRf~adNPG 450 (450)
|.++||+.|++++++.|+|++||||
T Consensus 223 p~~~dtv~l~pg~r~~v~~~~~~pG 247 (339)
T 2zwn_A 223 PYYADTVLVSPGERYDVIIEADNPG 247 (339)
T ss_dssp EEEESEEEECTTCEEEEEEECCSCS
T ss_pred CcEEEEEEECCCCEEEEEEEeCCCe
Confidence 7899999999999999999999998
No 40
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.81 E-value=9.2e-20 Score=174.78 Aligned_cols=209 Identities=19% Similarity=0.188 Sum_probs=142.1
Q ss_pred CCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeE
Q 013075 111 SDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTT 190 (450)
Q Consensus 111 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~ 190 (450)
...+++||+.. .|.|++++|+++++||.|.. .....++++|.. ..+.||.+- ++...|.||+++
T Consensus 54 ~~~~~~ng~~p---------gP~i~~~~Gd~v~v~~~N~~-~~~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~ 117 (288)
T 3gdc_A 54 FKGWSYNGRIP---------GPTLWAREGDALRIHFTNAG-AHPHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSF 117 (288)
T ss_dssp EEEEEETTBSS---------CCEEEEETTCEEEEEEEECS-SSCBCCEESSCC--CGGGSCCTT----STTCSBCTTCEE
T ss_pred EEEEEECCccC---------CCcEEEeCCCEEEEEEEeCC-CCcccEEecccc--ccccCCCCC----ccceeECCCCEE
Confidence 45789999852 48999999999999999997 456778888865 467899754 234568999999
Q ss_pred EEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccc
Q 013075 191 NVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLH 270 (450)
Q Consensus 191 dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~ 270 (450)
+..++++ .+|.||.+++...........+.+.-|+ +.... .+
T Consensus 118 ~y~f~~~-~~Gt~~yH~H~~~~~~~~~~Gl~G~liV--~~~~~----------------~~------------------- 159 (288)
T 3gdc_A 118 TYEFDAT-PFGTHLYHCHQSPLAPHIAKGLYGGFIV--EPKEG----------------RP------------------- 159 (288)
T ss_dssp EEEEECC-SCEEEEEECCCSSHHHHHHTTCEEEEEE--ECSSC----------------CC-------------------
T ss_pred EEEEEcC-CCccEEEEecCcchHHHHhCcCeEEEEE--eCCcc----------------CC-------------------
Confidence 9999997 5799999998642100011223333333 22111 00
Q ss_pred cCCCCcccceeEEEEec-cceeccCCCCCCCccCCCC-CeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCc
Q 013075 271 QVQVPTVIDENLFFTVG-LGLINCSNPNSPRCQGPNG-TRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPI 348 (450)
Q Consensus 271 p~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~ 348 (450)
..|+.+.+.+. +.. + ++ ..-.|+|||+.|.. .
T Consensus 160 ------~~d~e~~l~~~d~~~-------~------~g~~~~~~~iNG~~~~~------~--------------------- 193 (288)
T 3gdc_A 160 ------PADDEMVMVMNGYNT-------D------GGDDNEFYSVNGLPFHF------M--------------------- 193 (288)
T ss_dssp ------CCSEEEEEEEEEECC-------S------STTCCSEEEETTSTTHH------H---------------------
T ss_pred ------CCcceEEEEEeeEec-------C------CCCCcceEEECcccccc------c---------------------
Confidence 01222222221 100 0 11 12367899986631 0
Q ss_pred ccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCc
Q 013075 349 IFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPR 428 (450)
Q Consensus 349 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~ 428 (450)
...+.++.|++|+|.|.|.+. ..+.||||||||.|+|++.|.. +..|.+
T Consensus 194 ------------------~~~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~~------------~~~~~~ 242 (288)
T 3gdc_A 194 ------------------DFPVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGTM------------LTPSEY 242 (288)
T ss_dssp ------------------HSCEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTCC------------SSCSEE
T ss_pred ------------------CcccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCCc------------cCCCce
Confidence 124788999999999999652 2246999999999999985421 234579
Q ss_pred cceEEeCCCCEEEEEEEccCCC
Q 013075 429 RNTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 429 RDTv~vp~~g~~viRf~adNPG 450 (450)
+||+.|++++.+.|+|+++|||
T Consensus 243 ~Dtv~v~pg~~~~v~~~~~~pG 264 (288)
T 3gdc_A 243 TDTISQVQGQRGILELRFPYPG 264 (288)
T ss_dssp ESEEEEETTCEEEEEECCCSCE
T ss_pred eeEEEeCCCceEEEEEECCCCE
Confidence 9999999999999999999998
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.81 E-value=1.1e-19 Score=176.32 Aligned_cols=222 Identities=17% Similarity=0.178 Sum_probs=141.7
Q ss_pred CceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceE-EEEeCCCccCceeecEEEecCCCeE
Q 013075 112 DALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLT-VVGVDTSYTKPFPTSVIMIAPGQTT 190 (450)
Q Consensus 112 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~-via~DG~~v~P~~~~~i~l~~G~R~ 190 (450)
..+++||+.. .|+|++++|+++++||.|.. .....++++|.... ..+.||.+- +....|.||+++
T Consensus 23 ~~~~~ng~~p---------GP~i~~~~Gd~v~v~~~N~l-~~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~ 88 (318)
T 3g5w_A 23 HTFAFNGQVP---------APLIHVMEGDDVTVNVTNMT-TLPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTF 88 (318)
T ss_dssp EEEEETTBSS---------CCEEEEETTCEEEEEEEECS-SSCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEE
T ss_pred EEEEECCccC---------CceEEEeCCCEEEEEEEeCC-CCceeEEecCcCCCCCcccCCCcc----cccccCCCCCEE
Confidence 5789999852 48999999999999999987 45677888887654 236899753 234578999999
Q ss_pred EEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccc
Q 013075 191 NVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLH 270 (450)
Q Consensus 191 dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~ 270 (450)
+..++++ .+|.||.+++...........+.+.-|| +.... ..++.
T Consensus 89 ~y~f~~~-~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV--~~~~~-----------~~~~~--------------------- 133 (318)
T 3g5w_A 89 TYKFKAE-PAGTMWYHCHVNVNEHVTMRGMWGPLIV--EPKNP-----------LPIEK--------------------- 133 (318)
T ss_dssp EEEEECC-SCEEEEEECCSSHHHHHHHSCCEEEEEE--ECSSC-----------CHHHH---------------------
T ss_pred EEEEEcC-CCEEEEEEccCChhhhhccCCCEEEEEE--cCCCc-----------ccccc---------------------
Confidence 9999998 5799999998632110001223333333 22111 00000
Q ss_pred cCCCCcccceeEEEEec-cceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcc
Q 013075 271 QVQVPTVIDENLFFTVG-LGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPII 349 (450)
Q Consensus 271 p~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~ 349 (450)
..|+.+.+.++ ........ .. ....+....-.|+|||+.|. .
T Consensus 134 ------~~d~e~~l~l~dw~~~~~~~-~~-~~~~~~~~~d~~~ING~~~~--~--------------------------- 176 (318)
T 3g5w_A 134 ------TVTKDYILMLSDWVSSWANK-PG-EGGIPGDVFDYYTINAKSFP--E--------------------------- 176 (318)
T ss_dssp ------TCCEEEEEEEEEECGGGTTC-TT-CCCCTTCCCCEEEETTBCBT--S---------------------------
T ss_pred ------cccceeEEEEEeeccccccc-cc-cCCCCCCcCcEEEEcCcCCC--C---------------------------
Confidence 01111111110 00000000 00 00000001225789998652 1
Q ss_pred cccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCcc
Q 013075 350 FDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRR 429 (450)
Q Consensus 350 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~R 429 (450)
...+.++.|++|+|+|.|.+ ...||||||||+|+||++..+ .+.+|.+|
T Consensus 177 -----------------~~~l~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~dG~-----------~~~~p~~~ 225 (318)
T 3g5w_A 177 -----------------TQPIRVKKGDVIRLRLIGAG---DHVHAIHTHGHISQIAFKDGF-----------PLDKPIKG 225 (318)
T ss_dssp -----------------SCCEEECTTCEEEEEEEECS---SSCEEEEETTSCEEEEEETTE-----------EEEEEEEE
T ss_pred -----------------CccEEeCCCCEEEEEEEeCC---CceEEEEECCcEEEEEecCCc-----------ccCCCccc
Confidence 12478899999999999975 347999999999999997421 12357899
Q ss_pred ceEEeCCCCEEEEEEEccCCC
Q 013075 430 NTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 430 DTv~vp~~g~~viRf~adNPG 450 (450)
||+.|++++.+.|+|+|||||
T Consensus 226 dtv~l~pger~~v~~~a~~pG 246 (318)
T 3g5w_A 226 DTVLIGPGERYDVILNMDNPG 246 (318)
T ss_dssp SEEEECTTCEEEEEEECCSCS
T ss_pred cEEEECCCCEEEEEEECCCCe
Confidence 999999999999999999998
No 42
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.79 E-value=4.7e-19 Score=173.74 Aligned_cols=189 Identities=17% Similarity=0.193 Sum_probs=129.7
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCC-----------
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQP----------- 199 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~----------- 199 (450)
.|+|++++|+++|+||+|... ....|+.+|..+. .+.||.++ +...|.|||+++..++++++
T Consensus 76 GP~I~v~~Gd~v~v~~~N~l~-~~~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~ 148 (343)
T 3cg8_A 76 GPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 148 (343)
T ss_dssp CCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCEEEEECCCEEEEEEEECCC-CCeeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCCC
Confidence 489999999999999999994 5556888887776 68999874 34468999999999999753
Q ss_pred -CceeEEEeeeeccc---cccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccccCCCC
Q 013075 200 -PARYYMAAHAYNTA---NAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQVQVP 275 (450)
Q Consensus 200 -~g~y~l~~~~~~~~---~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p 275 (450)
.|.||.+++..... ......+.+..||...+ . .
T Consensus 149 ~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~--~----------~------------------------------- 185 (343)
T 3cg8_A 149 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG--D----------V------------------------------- 185 (343)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT--C----------C-------------------------------
T ss_pred CceEEEEecCccccccchhhhhcCCeEEEEEecCC--C----------C-------------------------------
Confidence 36677777642110 00112233444443221 0 0
Q ss_pred cccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCC
Q 013075 276 TVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGN 355 (450)
Q Consensus 276 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 355 (450)
.+|+.+.+.++ .|+|||+.+.
T Consensus 186 -~pd~e~~l~~~----------------------d~~iNG~~~~------------------------------------ 206 (343)
T 3cg8_A 186 -LPDATHTIVFN----------------------DMTINNRKPH------------------------------------ 206 (343)
T ss_dssp -CCSEEEEEEEE----------------------TTEETTCCTT------------------------------------
T ss_pred -CCCceEEEEcc----------------------cceecccCCC------------------------------------
Confidence 01223333221 2568887542
Q ss_pred CCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCccceEEeC
Q 013075 356 VSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTP 435 (450)
Q Consensus 356 ~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp 435 (450)
....+.++.|++|+|+|.|.+ .+.||||||||.|+|++. |.+... ...+.+|||+.|+
T Consensus 207 ----------~~~~l~v~~Ge~vri~l~N~g---~~~HpfHlHGh~f~v~~~--G~~~~p-------~~~~~~~Dtv~v~ 264 (343)
T 3cg8_A 207 ----------TGPDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTGP-------DDPSRVIDNKITG 264 (343)
T ss_dssp ----------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCST-------TCCCCEESEEEEC
T ss_pred ----------CCccEEeCCCCEEEEEEEcCC---ccccccEecCcEEEEecc--CcccCC-------CCcccceeeEEeC
Confidence 022588999999999999975 468999999999999753 333211 1235689999999
Q ss_pred CCCEEEEEEEc---cCCC
Q 013075 436 PGGWVAVRFVA---ENPG 450 (450)
Q Consensus 436 ~~g~~viRf~a---dNPG 450 (450)
+++++.|+|++ ||||
T Consensus 265 PG~~~~v~~~~~~~~~pG 282 (343)
T 3cg8_A 265 PADSFGFQIIAGEGVGAG 282 (343)
T ss_dssp TTCEEEEEEETTTTTCSE
T ss_pred CCCEEEEEEEECCCCCCe
Confidence 99999999995 8997
No 43
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.71 E-value=8.2e-17 Score=153.25 Aligned_cols=197 Identities=16% Similarity=0.179 Sum_probs=135.8
Q ss_pred eeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEE
Q 013075 114 LTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVL 193 (450)
Q Consensus 114 ~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~ 193 (450)
...||+.- .|+|+++.|++++++|.|.. .....++.+|..+.. +.||.+ +..-.|.||+++...
T Consensus 27 ~~~ng~~p---------GP~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~ 90 (276)
T 3kw8_A 27 EKGKASVP---------GPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYT 90 (276)
T ss_dssp STTCCBSS---------CCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEE
T ss_pred eccCCccc---------CCeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEE
Confidence 44677642 49999999999999999996 567778888877654 689986 233468999999999
Q ss_pred EEeCCC------------CceeEEEeeeeccc---cccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccc
Q 013075 194 LTADQP------------PARYYMAAHAYNTA---NAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTAT 258 (450)
Q Consensus 194 v~~~~~------------~g~y~l~~~~~~~~---~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~ 258 (450)
++++++ .|.||.+++..... ......+.+.-||. . ... .
T Consensus 91 f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~-~-~~~----------~-------------- 144 (276)
T 3kw8_A 91 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVR-R-KGD----------V-------------- 144 (276)
T ss_dssp EECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEE-C-TTC----------C--------------
T ss_pred EEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEe-c-CCC----------c--------------
Confidence 999752 47899998753210 00111233333332 1 111 0
Q ss_pred hhhhhhcccccccCCCCcccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCc
Q 013075 259 ATAFTARIKSLHQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIF 338 (450)
Q Consensus 259 ~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~ 338 (450)
.+|+.+.+.++ .|+|||+.|. +
T Consensus 145 ------------------~~drE~~l~l~----------------------~~~iNG~~~~-~----------------- 166 (276)
T 3kw8_A 145 ------------------LPDATHTIVFN----------------------DMTINNRKPH-T----------------- 166 (276)
T ss_dssp ------------------CCSEEEEEEEE----------------------TTEETTCCTT-C-----------------
T ss_pred ------------------ccccceEEEec----------------------ccccceeccc-C-----------------
Confidence 01333333221 2579987653 0
Q ss_pred cCCCCCCCCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCC
Q 013075 339 TTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDT 418 (450)
Q Consensus 339 ~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~ 418 (450)
...+.++.|++|+|+|.|.+ .+.||||||||.|+|++.| .++..
T Consensus 167 ----------------------------~p~i~v~~G~~vri~l~N~~---~~~Hp~HlHG~~f~v~~~G--~~~~p--- 210 (276)
T 3kw8_A 167 ----------------------------GPDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRTG--ILTGP--- 210 (276)
T ss_dssp ----------------------------CCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSSS--SCCST---
T ss_pred ----------------------------CCCEEEecCCEEEEEEecCC---CcceeEEEccceeEEeccC--ccCCC---
Confidence 12588999999999999965 3689999999999997643 33221
Q ss_pred CCCCCCCCCccceEEeCCCCEEEEEEEcc---CCC
Q 013075 419 AKFNLIDPPRRNTIGTPPGGWVAVRFVAE---NPG 450 (450)
Q Consensus 419 ~~~n~~~P~~RDTv~vp~~g~~viRf~ad---NPG 450 (450)
...+.+|||+.|++++.+.++|+++ |||
T Consensus 211 ----~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG 241 (276)
T 3kw8_A 211 ----DDPSRVIDNKITGPADSFGFQIIAGEGVGAG 241 (276)
T ss_dssp ----TCCCCEESEEEECTTCEEEEEEETTTTTCSE
T ss_pred ----cccccCCccEEeCCCceEEEEEEeccCCCCC
Confidence 1235699999999999999999997 887
No 44
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.67 E-value=2.7e-16 Score=151.22 Aligned_cols=189 Identities=16% Similarity=0.225 Sum_probs=126.0
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCC------------
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQ------------ 198 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~------------ 198 (450)
.|+|++++|++++++|.|.. ....+++.+|..+. -+.||.++. .-.|.|||.+...+++++
T Consensus 57 GP~i~~~~GD~v~v~~~N~l-~~~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~ 129 (299)
T 3t9w_A 57 GPVLEMWEGDTLEIDLVNTT-DRVLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAEG 129 (299)
T ss_dssp CCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CceEEEECCeEEEEEEEECC-CCCccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCCC
Confidence 48999999999999999987 45677888887655 367997642 124789999999988763
Q ss_pred CCceeEEEeeeeccccc---cCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccccCCCC
Q 013075 199 PPARYYMAAHAYNTANA---AFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQVQVP 275 (450)
Q Consensus 199 ~~g~y~l~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p 275 (450)
..|.||.+++....... ....+.+.-||. ....
T Consensus 130 ~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~--~~~~------------------------------------------ 165 (299)
T 3t9w_A 130 TAGYWHYHDHAMGTEHGTEGVLKGLYGALVVR--RQGD------------------------------------------ 165 (299)
T ss_dssp CCEEEEEECSSSSSTTCHHHHHHTCEEEEEEE--CTTC------------------------------------------
T ss_pred CceeEEEecCCcccccchhhhcccccceEEEe--cccc------------------------------------------
Confidence 34889988874321100 011222233332 1100
Q ss_pred cccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCC
Q 013075 276 TVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGN 355 (450)
Q Consensus 276 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 355 (450)
..+|+.+.+.++ .|.+|+..+.
T Consensus 166 ~~~d~e~~l~~~----------------------~~~~Ng~~~~------------------------------------ 187 (299)
T 3t9w_A 166 LLPKRQFTVVFN----------------------DMMINNRAHH------------------------------------ 187 (299)
T ss_dssp CCCSEEEEEEEE----------------------TTEETTCCTT------------------------------------
T ss_pred cCccccceeeee----------------------eeeecCcccc------------------------------------
Confidence 012344433322 2457775441
Q ss_pred CCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCccceEEeC
Q 013075 356 VSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTP 435 (450)
Q Consensus 356 ~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp 435 (450)
....+.++.|++|+|+|.|.+ ...||||||||.|+|+..+.... ....+.++||+.|.
T Consensus 188 ----------~~p~l~v~~Ge~Vr~~liN~~---~~~HpfHlHGh~F~v~~~g~~~~---------~~~~~~~~Dtv~v~ 245 (299)
T 3t9w_A 188 ----------DAPTFEANLGERVEWIAIGHG---SNFHTFHLHGHRWLDNRTGMRTS---------EYDPSPLIDIKDLN 245 (299)
T ss_dssp ----------CCCEEEEETTCEEEEEEEEES---SCCCEEEETTCCEESSSSSSCCS---------TTCCCCEESEEECC
T ss_pred ----------ccccceecCCCEEEEEEEecc---ccceeeeEecceEEEEecccccC---------CcCCCCceeeEEeC
Confidence 123688999999999999965 46799999999999988763321 22345689999999
Q ss_pred CCC---EEEEEEEccCCC
Q 013075 436 PGG---WVAVRFVAENPG 450 (450)
Q Consensus 436 ~~g---~~viRf~adNPG 450 (450)
++. +++++|++||||
T Consensus 246 PGe~~~~~via~~~dnPG 263 (299)
T 3t9w_A 246 PGVSFGFQVIAGEGVGPG 263 (299)
T ss_dssp TTCEEEEEEETTTTTCSE
T ss_pred CceeEEEEEEEeeCCCCe
Confidence 985 556777889998
No 45
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.65 E-value=1.9e-15 Score=147.42 Aligned_cols=224 Identities=16% Similarity=0.117 Sum_probs=137.1
Q ss_pred CCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCC-ceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCe
Q 013075 111 SDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMN-QEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQT 189 (450)
Q Consensus 111 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R 189 (450)
...+++||+.. .|+|++++|+++|||++|.... ....++++|.. +.||.+. ...|.|||+
T Consensus 58 ~~~~~~ng~~p---------gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~ 118 (327)
T 1kbv_A 58 YRYWTFDGDVP---------GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRT 118 (327)
T ss_dssp EEEEEETTBSS---------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEE
T ss_pred EEEEEECCccC---------CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCE
Confidence 35689999742 4899999999999999999753 46777777753 5788642 124899999
Q ss_pred EEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhccccc
Q 013075 190 TNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSL 269 (450)
Q Consensus 190 ~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l 269 (450)
+++.+++++ +|.||.+++...........+. .++|.+.. .. +| ...+... ..+...
T Consensus 119 ~~y~f~~~~-~Gt~wyH~h~~~~~~~~~~Gl~-G~~iV~~~-~~-------------~p---~~d~e~~-----l~~~d~ 174 (327)
T 1kbv_A 119 STFSFKALQ-PGLYIYHCAVAPVGMHIANGMY-GLILVEPK-EG-------------LP---KVDKEFY-----IVQGDF 174 (327)
T ss_dssp EEEEEECCS-CEEEEEECCCSSHHHHHHTTCE-EEEEEECT-TC-------------CC---CCSEEEE-----EEEEEE
T ss_pred EEEEEECCC-CeEEEEEeCCCChhhhhhcceE-EEEEEecC-CC-------------CC---CCceEEE-----EEeeee
Confidence 999999986 7999999985321111112233 33333321 11 11 1111000 000000
Q ss_pred ccCCCCcccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcc
Q 013075 270 HQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPII 349 (450)
Q Consensus 270 ~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~ 349 (450)
.-....... ... ...+.... +.. .-.+.|||+.+..
T Consensus 175 ~~~~~~~~~-g~~--~~~~~~~~----------~~~--~~~~~iNG~~~~~----------------------------- 210 (327)
T 1kbv_A 175 YTKGKKGAQ-GLQ--PFDMDKAV----------AEQ--PEYVVFNGHVGAL----------------------------- 210 (327)
T ss_dssp CBSSCTTCC-EEE--CBCHHHHH----------HTC--CSEEEETTSTTTT-----------------------------
T ss_pred eccCccccc-ccc--ccChhHhc----------cCC--CceEEEcCcccCC-----------------------------
Confidence 000000000 000 00000000 001 1245688865421
Q ss_pred cccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCcc
Q 013075 350 FDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRR 429 (450)
Q Consensus 350 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~R 429 (450)
+ ....+.++.|++++|.|.|.+. ...|+||||||.|+||+...+. ..|.++
T Consensus 211 --------------~-~~~~l~v~~G~~vRlRliN~~~--~~~~~~~l~Gh~f~vi~~DG~~------------~~p~~~ 261 (327)
T 1kbv_A 211 --------------T-GDNALKAKAGETVRMYVGNGGP--NLVSSFHVIGEIFDKVYVEGGK------------LINENV 261 (327)
T ss_dssp --------------S-GGGCEEEETTEEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGSS------------CEECSB
T ss_pred --------------C-CceeEEeCCCCEEEEEEECCCC--CCceeEEEeCCEEEEEEcCCCc------------CCCCce
Confidence 0 0135789999999999999752 4579999999999999984321 237799
Q ss_pred ceEEeCCCCEEEEEEEccCCC
Q 013075 430 NTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 430 DTv~vp~~g~~viRf~adNPG 450 (450)
||+.|.+|+.+.|.|++++||
T Consensus 262 d~l~l~pGer~dv~v~~~~pG 282 (327)
T 1kbv_A 262 QSTIVPAGGSAIVEFKVDIPG 282 (327)
T ss_dssp SEEEECTTEEEEEEEEECSCE
T ss_pred eEEEECCCCEEEEEEEeCCCe
Confidence 999999999999999999997
No 46
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.60 E-value=5.4e-16 Score=149.83 Aligned_cols=212 Identities=11% Similarity=0.041 Sum_probs=118.8
Q ss_pred eeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccC----ceeecEEEecCCCe
Q 013075 114 LTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTK----PFPTSVIMIAPGQT 189 (450)
Q Consensus 114 ~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~~~i~l~~G~R 189 (450)
.++||..+ |+|++++|+++|+||+|.. .....|+.+|..+. .+.||.+.. +..+....|.||||
T Consensus 52 ~~~n~~pG----------P~I~v~~Gd~v~v~~~N~l-~~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~ 119 (306)
T 1sdd_A 52 SRTSGLLG----------PTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQE 119 (306)
T ss_dssp CSSCCSCC----------CCEEEETTCEEEEEEEECS-SSCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCE
T ss_pred cccCCccC----------CEEEEeCCCEEEEEEEECC-CCcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCe
Confidence 56888765 8999999999999999976 46667777776643 268998762 23344678999999
Q ss_pred EEEEEEeCCCC---------ceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchh
Q 013075 190 TNVLLTADQPP---------ARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATAT 260 (450)
Q Consensus 190 ~dv~v~~~~~~---------g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~ 260 (450)
++..+++++.. |.||.+++..... .....+.+ ++|.+..... ... +..+....
T Consensus 120 ~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~-q~~~GL~G-~liV~~~~~~--------~~~---~~~~~~d~----- 181 (306)
T 1sdd_A 120 YTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVE-DFNSGLIG-PLLICKKGTL--------TED---GTQKMFEK----- 181 (306)
T ss_dssp EEEEEECCGGGSCCSSSCSEEEEEEECCSSSHH-HHHTTCCE-EEEEECTTCB--------CTT---SSBSSSCC-----
T ss_pred EEEEEEeCCccCCCCCCCCceEEEEeccCCchh-hhccCceE-EEEEccCCCC--------Ccc---CCcCcccc-----
Confidence 99999998643 6999999842210 01122333 4444432211 000 00000000
Q ss_pred hhhhcccccccCCCCcccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccC
Q 013075 261 AFTARIKSLHQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTT 340 (450)
Q Consensus 261 ~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~ 340 (450)
++...+.. +.-.... . ......++|||+.+..
T Consensus 182 e~~l~~~d---------------~d~~~~~----------~---~~~~~~~~ING~~~~~-------------------- 213 (306)
T 1sdd_A 182 QHVLMFAV---------------FDESKSW----------N---QTSSLMYTVNGYVNGT-------------------- 213 (306)
T ss_dssp CCCCBCCE---------------EETTSSS----------S---CCCCEEECSSSCCSSC--------------------
T ss_pred eEEEEEEe---------------ccccccc----------c---cCCCcceeeCCEecCC--------------------
Confidence 00000000 0000000 0 0012356788875520
Q ss_pred CCCCCCCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCC
Q 013075 341 DFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAK 420 (450)
Q Consensus 341 ~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~ 420 (450)
...+.++.|++|+|.|.|.+. ....||||||||.|++ .|
T Consensus 214 --------------------------~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~----dG---------- 252 (306)
T 1sdd_A 214 --------------------------MPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQ----NH---------- 252 (306)
T ss_dssp --------------------------CCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEE----TT----------
T ss_pred --------------------------CcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeee----CC----------
Confidence 013557789999999999763 2256999999999986 11
Q ss_pred CCCCCCCccceEEeCCCCEEEEEEEccCCC
Q 013075 421 FNLIDPPRRNTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 421 ~n~~~P~~RDTv~vp~~g~~viRf~adNPG 450 (450)
.++||+.|.|++.+.|+|++++||
T Consensus 253 ------~~~dtv~l~pger~~v~~~~~~pG 276 (306)
T 1sdd_A 253 ------HKISAITLVSATSTTANMTVSPEG 276 (306)
T ss_dssp ------EECSCCCEETTCCBC--------C
T ss_pred ------EEcceEEECCCcEEEEEEEcCCCe
Confidence 258999999999999999999998
No 47
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.60 E-value=1.2e-14 Score=140.74 Aligned_cols=189 Identities=15% Similarity=0.149 Sum_probs=124.4
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCC------------
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQ------------ 198 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~------------ 198 (450)
.|+|++++|++++++|.|.. .....|+.+|..+.. +.||.+.. .-.|.||+.++..+++..
T Consensus 41 GP~i~~~~Gd~v~v~~~N~l-~~~~siH~HG~~~~~-~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~ 113 (313)
T 3tas_A 41 GPLIELNEGDTLHIEFENTM-DVPVSLHVHGLDYEI-SSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTWRAG 113 (313)
T ss_dssp CCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECC-CCCccEeecCCcCCc-cCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccccCC
Confidence 48999999999999999987 456778888876542 57887542 123789999999887652
Q ss_pred CCceeEEEeeeeccccc---cCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccccCCCC
Q 013075 199 PPARYYMAAHAYNTANA---AFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQVQVP 275 (450)
Q Consensus 199 ~~g~y~l~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~~~p 275 (450)
..|.||.+++....... ....+.+.-||. ....
T Consensus 114 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~--~~~~------------------------------------------ 149 (313)
T 3tas_A 114 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVR--RKGD------------------------------------------ 149 (313)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEE--CTTC------------------------------------------
T ss_pred CceEEEEeecCcccccchhhhhccccCceEee--cccc------------------------------------------
Confidence 24788888874221100 011222333332 1100
Q ss_pred cccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCC
Q 013075 276 TVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGN 355 (450)
Q Consensus 276 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 355 (450)
..+|+.+.+.++ .|++|+..+.
T Consensus 150 ~~~d~e~~l~~~----------------------d~t~Ng~~~~------------------------------------ 171 (313)
T 3tas_A 150 VLPDRTHTIVFN----------------------DMTINNRPAH------------------------------------ 171 (313)
T ss_dssp BCCSEEEEEEEE----------------------TTEETTCCTT------------------------------------
T ss_pred ccccccceeecc----------------------chhcccCCcc------------------------------------
Confidence 012444444322 2567775432
Q ss_pred CCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCccceEEeC
Q 013075 356 VSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTP 435 (450)
Q Consensus 356 ~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp 435 (450)
....+.++.|++|+|+|.|.+ .+.||||||||.|+|++.+... .....|.++||+.|.
T Consensus 172 ----------~~~~l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~~---------~~~~~~~~~Dtv~l~ 229 (313)
T 3tas_A 172 ----------TGPDFEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGMLT---------GPDDPSQVIDNKICG 229 (313)
T ss_dssp ----------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSCC---------STTCCCCEESEEEEC
T ss_pred ----------cccccccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCcc---------CCCCCCeeeeEEEeC
Confidence 122578899999999999965 4689999999999999875321 122357799999999
Q ss_pred CCCEEEEEEE---ccCCC
Q 013075 436 PGGWVAVRFV---AENPG 450 (450)
Q Consensus 436 ~~g~~viRf~---adNPG 450 (450)
|++.+.++|. ++|||
T Consensus 230 Pger~~v~v~a~~~~nPG 247 (313)
T 3tas_A 230 PADSFGFQVIAGEGVGAG 247 (313)
T ss_dssp TTCEEEEEEETTTTTCSE
T ss_pred CCcceEEEEEeccCCCCE
Confidence 9987766664 56887
No 48
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.57 E-value=1.6e-14 Score=153.65 Aligned_cols=222 Identities=13% Similarity=0.108 Sum_probs=122.5
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccC---c-eeecEEEecCCCeEEEEEEeCCC-----Cc
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTK---P-FPTSVIMIAPGQTTNVLLTADQP-----PA 201 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~---P-~~~~~i~l~~G~R~dv~v~~~~~-----~g 201 (450)
.|+|++++|+++++||.|... ....|+.+|..+. .+.||.+.. | ..+....|.||++++..+++++. +|
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCSS-SCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECCC-CceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 489999999999999999984 5666777776654 578998642 2 23446789999999999999874 47
Q ss_pred ----eeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhcccccccC-CCCc
Q 013075 202 ----RYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSLHQV-QVPT 276 (450)
Q Consensus 202 ----~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~p~-~~p~ 276 (450)
.||.+++..... .....+.+.-||.-.+... .. +..|. .+.. +...+..+... ...-
T Consensus 146 ~~c~T~wYHsH~~~~~-q~~~GL~G~lIV~~~~~~~---------~~---~~~~~-~~~e----~~l~l~~~d~~~~w~~ 207 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEK-DIHSGLIGPLLICRKGTLD---------KE---TNMPV-DMRE----FVLLFMVFDEKKSWYY 207 (647)
T ss_dssp CSEEEEEEECCSSHHH-HHTTTCEEEEEEECTTSSC---------TT---SCCCS-SCCE----EEEEEEEEEGGGSSCC
T ss_pred CCceEEEEccCCCCcc-cccccCccCEEEeeCCCcc---------cc---cCCCC-ccee----EEEEEEeecCcccccc
Confidence 999999863211 1112233333443222111 00 00111 0000 00001000000 0000
Q ss_pred ccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcccccCCCC
Q 013075 277 VIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNV 356 (450)
Q Consensus 277 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 356 (450)
....+..+.. ... ........++|||+.|.
T Consensus 208 ~~~~~~~~~~-~~~------------~~~~~~~~~~iNG~~~~------------------------------------- 237 (647)
T 1sdd_B 208 DKKPTRSWRR-ASS------------EVKNSHEFHAINGMIYN------------------------------------- 237 (647)
T ss_dssp C----------------------------CCCEEEEETTBSSC-------------------------------------
T ss_pred ccCccccccc-CCc------------chhhcCceeccCCEecC-------------------------------------
Confidence 0000000000 000 00011235678886541
Q ss_pred CCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCccceEEeCC
Q 013075 357 SRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPP 436 (450)
Q Consensus 357 p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~ 436 (450)
...+.++.|++|+|.|.|.+. ..+.||||||||.|+|++. +|.++||+.|.|
T Consensus 238 ----------~p~l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~-----------------d~~~~d~v~l~p 289 (647)
T 1sdd_B 238 ----------LPGLRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGT-----------------QQHQLGVWPLLP 289 (647)
T ss_dssp ----------CCCCEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSS-----------------SCEEESSEEECT
T ss_pred ----------CCCeEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecC-----------------CCcccceEEECC
Confidence 114678999999999999752 2348999999999999865 244899999999
Q ss_pred CCEEEEEEEccCCC
Q 013075 437 GGWVAVRFVAENPG 450 (450)
Q Consensus 437 ~g~~viRf~adNPG 450 (450)
++.+.|+|++++||
T Consensus 290 g~r~~v~~~~~~pG 303 (647)
T 1sdd_B 290 GSFKTLEMKASKPG 303 (647)
T ss_dssp TEEEEEEEECCSSE
T ss_pred CeEEEEEEEeccce
Confidence 99999999999997
No 49
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.48 E-value=5.5e-13 Score=130.76 Aligned_cols=80 Identities=20% Similarity=0.258 Sum_probs=59.9
Q ss_pred CCCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCC-ceEEEEEeCcceEEEEeCCCccCceeecEEEecCCC
Q 013075 110 ISDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMN-QEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQ 188 (450)
Q Consensus 110 ~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~ 188 (450)
....+++||+.. .|+|++++|+++|+|++|.... ..+.++++++.. +.||..+ . .|.|||
T Consensus 58 ~~~~~~~ng~~p---------gP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~---~----~i~PG~ 118 (340)
T 2bw4_A 58 EIHAMTFNGSVP---------GPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL---T----QVNPGE 118 (340)
T ss_dssp EEEEEEETTBSS---------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG---C----CBCTTE
T ss_pred EEEEEEECCCCC---------CCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc---e----EeCCCC
Confidence 345789999842 3899999999999999999732 345566666432 2233322 1 399999
Q ss_pred eEEEEEEeCCCCceeEEEeee
Q 013075 189 TTNVLLTADQPPARYYMAAHA 209 (450)
Q Consensus 189 R~dv~v~~~~~~g~y~l~~~~ 209 (450)
++++.+++++ +|.||.+++.
T Consensus 119 ~~~y~~~~~~-~Gt~wyH~h~ 138 (340)
T 2bw4_A 119 ETTLRFKATK-PGVFVYHCAP 138 (340)
T ss_dssp EEEEEEECCS-CEEEEEECCC
T ss_pred EEEEEEECCC-CeEEEEEcCC
Confidence 9999999996 7999999985
No 50
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.45 E-value=5.1e-13 Score=135.75 Aligned_cols=224 Identities=14% Similarity=0.103 Sum_probs=135.7
Q ss_pred CCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCC-CceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCe
Q 013075 111 SDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAM-NQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQT 189 (450)
Q Consensus 111 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R 189 (450)
...+++||+.. .|.|+++.|++++|||.|... .....++++|+. ..||... ...|.||++
T Consensus 48 ~~~~~~ng~~p---------gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~ 108 (442)
T 2zoo_A 48 YVFWSFGETVP---------GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHT 108 (442)
T ss_dssp EEEEEETTBSS---------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCE
T ss_pred EEEEEECCcCC---------CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCE
Confidence 45689999852 489999999999999999964 357778998865 3677532 235899999
Q ss_pred EEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhccccc
Q 013075 190 TNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSL 269 (450)
Q Consensus 190 ~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l 269 (450)
+++.+++++ +|.||.+++...........+ .+.|.+..... +| .+... +...+...
T Consensus 109 ~~y~f~~~~-~Gt~~yH~H~~~~~~~~~~Gl--~G~~iv~~~~~-------------~~---~~d~e-----~~l~l~d~ 164 (442)
T 2zoo_A 109 STFNFKALN-PGLYIYHCATAPVGMHIANGM--YGLILVEPKEG-------------LA---PVDRE-----YYLVQGDF 164 (442)
T ss_dssp EEEEEECCS-CEEEEEECCCSSHHHHHHTTC--EEEEEEECTTC-------------CC---CCSEE-----EEEEEEEE
T ss_pred EEEEEEcCC-CeEEEEecCCCChHHHHhCcc--EEEEEEeCCCC-------------CC---CCCce-----EEEEeeee
Confidence 999999984 799999996421111011122 33333332111 01 11000 00001110
Q ss_pred ccCCCCcccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcc
Q 013075 270 HQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPII 349 (450)
Q Consensus 270 ~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~ 349 (450)
.- .......-.....+.... ....-.+.|||+.+...
T Consensus 165 ~~---~~~~~~~~~~~~~~~~~~------------~~~~~~~liNG~~~~~~---------------------------- 201 (442)
T 2zoo_A 165 YT---KGEFGEAGLQPFDMAKAI------------DEDADYVVFNGSVGSTT---------------------------- 201 (442)
T ss_dssp CB---SSCTTCCEEECBCHHHHH------------TTCCSEEEETTSTTTTS----------------------------
T ss_pred ec---cCcccccccccCChhHhc------------cCCCCEEEECCCcCCCC----------------------------
Confidence 00 000000000000000000 01112456888644210
Q ss_pred cccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCcc
Q 013075 350 FDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRR 429 (450)
Q Consensus 350 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~R 429 (450)
....+.++.|++|+|.|.|.+. ...|+||+|||.|.|++...+ ...|.+.
T Consensus 202 ----------------~~~~l~v~~G~~vrlrliN~~~--~~~~~~~i~g~~~~vi~~DG~------------~~~p~~~ 251 (442)
T 2zoo_A 202 ----------------DENSLTAKVGETVRLYIGNGGP--NLVSSFHVIGEIFDTVYVEGG------------SLKNHNV 251 (442)
T ss_dssp ----------------GGGCEEEETTCEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGS------------SCEECSB
T ss_pred ----------------CCCceEeCCCCEEEEEEEeCCC--CCceeeEEcCCEEEEEecCCc------------cCCCccc
Confidence 0125788999999999999652 467999999999999997422 1236789
Q ss_pred ceEEeCCCCEEEEEEEccCCC
Q 013075 430 NTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 430 DTv~vp~~g~~viRf~adNPG 450 (450)
|++.|.+++.+.|.|++++||
T Consensus 252 ~~~~l~pg~r~~v~v~~~~~G 272 (442)
T 2zoo_A 252 QTTLIPAGGAAIVEFKVEVPG 272 (442)
T ss_dssp SEEEECTTEEEEEEEECCSCE
T ss_pred eEEEECCCeeEEEEEEcCCCC
Confidence 999999999999999999886
No 51
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.44 E-value=3.3e-14 Score=152.54 Aligned_cols=216 Identities=12% Similarity=0.108 Sum_probs=127.3
Q ss_pred ceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCC---------CC
Q 013075 130 ETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQ---------PP 200 (450)
Q Consensus 130 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~---------~~ 200 (450)
..|.|+++.|++++++|.|.. .....|+.+|..+..-.-||.+- ..-.|.||++++..+++.+ .+
T Consensus 197 pGP~Ir~~~GD~v~v~~~N~l-~~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~ 270 (770)
T 2r7e_B 197 LGPYIRAEVEDNIMVTFRNQA-SRPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDC 270 (770)
T ss_dssp CCCCCCCCSSSCEEEEEECCS-SSCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSE
T ss_pred CCCeEEEEcCCEEEEEEEECC-CCCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCC
Confidence 458999999999999999997 46777788877655444458642 1246899999999999885 45
Q ss_pred ceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhh---h--------hhccccc
Q 013075 201 ARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATA---F--------TARIKSL 269 (450)
Q Consensus 201 g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~---~--------~~~l~~l 269 (450)
|.||.+++..... .....+.+.-||. ..... .. .. .+...+...... + ...++..
T Consensus 271 Gt~wYHsh~~~~~-q~~~GL~G~liV~-~~~~~---------~~-~~--~~~~~d~E~vl~~~~~de~~swy~~~~~~~~ 336 (770)
T 2r7e_B 271 KAWAYSSDVDLEK-DVHSGLIGPLLVC-HTNTL---------NP-AH--GRQVTVQEFALFFTIFDETKSWYFTENMERN 336 (770)
T ss_dssp EEEEECCCSSSSH-HHHTSCCEEEEEE-CSTTS---------CS-SS--CCCCSSEEEECCCCEECCSSSSCTTGGGSSC
T ss_pred eeEEeeccCCcHH-HHhCCceeeEEEC-CCccc---------cc-cc--CCCccceEEEEEEeecCccccchhccchhhc
Confidence 8999998863210 0112233333333 21111 00 00 000000000000 0 0000000
Q ss_pred ccCCCCcccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcc
Q 013075 270 HQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPII 349 (450)
Q Consensus 270 ~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~ 349 (450)
.+ .|...+ .. .... .....+|+|||..|.
T Consensus 337 ~~--~p~~~~--------~~--------d~~~---~~~~~~~~ING~~~~------------------------------ 365 (770)
T 2r7e_B 337 CR--APCNIQ--------ME--------DPTF---KENYRFHAINGYIMD------------------------------ 365 (770)
T ss_dssp SC--CSSCCC--------SS--------SSSS---TTTSCEECTTSCTTT------------------------------
T ss_pred cc--Cccccc--------cC--------Cccc---cccCCccccCCccCC------------------------------
Confidence 00 000000 00 0000 000124567775441
Q ss_pred cccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCcc
Q 013075 350 FDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRR 429 (450)
Q Consensus 350 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~R 429 (450)
....+.++.|++|+|.|.|.+. ....||||||||.|+|++.+ +.++
T Consensus 366 ----------------~~~~l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-----------------g~~~ 411 (770)
T 2r7e_B 366 ----------------TLPGLVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-----------------EYKM 411 (770)
T ss_dssp ----------------TCCCCCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-----------------CCEE
T ss_pred ----------------CCCCeEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-----------------Ccee
Confidence 0124567899999999999752 23579999999999999863 1289
Q ss_pred ceEEeCCCCEEEEEEEccCCC
Q 013075 430 NTIGTPPGGWVAVRFVAENPG 450 (450)
Q Consensus 430 DTv~vp~~g~~viRf~adNPG 450 (450)
|||.|+|++++.|+|+|||||
T Consensus 412 Dtv~l~Pg~~~~v~~~ad~pG 432 (770)
T 2r7e_B 412 ALYNLYPGVFETVEMLPSKAG 432 (770)
T ss_dssp SEEECCTTCCCEEEECCSSCB
T ss_pred eEEEECCCeEEEEEEEeCCCC
Confidence 999999999999999999998
No 52
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.31 E-value=3.6e-11 Score=117.41 Aligned_cols=80 Identities=19% Similarity=0.256 Sum_probs=56.3
Q ss_pred CCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCc-eEEEEEeCcceEEEEeCCCccCceeecEEEecCCCe
Q 013075 111 SDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQ-EHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQT 189 (450)
Q Consensus 111 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R 189 (450)
...+++||+.. .|.|++++|+++|+|++|.+... .+-++++++. ..||. .+ +. .|.||++
T Consensus 52 ~~~~~~ng~~p---------gP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~--~~--~~--~i~PG~~ 112 (333)
T 1mzy_A 52 LQAMTFDGSIP---------GPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGG--GG--LT--LINPGEK 112 (333)
T ss_dssp EEEEEETTBSS---------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGG--GG--GC--CBCTTEE
T ss_pred EEEEEECCccC---------CCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCC--Cc--ee--EeCCCCE
Confidence 45689999852 48999999999999999996321 2223333321 12222 11 11 3999999
Q ss_pred EEEEEEeCCCCceeEEEeeee
Q 013075 190 TNVLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 190 ~dv~v~~~~~~g~y~l~~~~~ 210 (450)
+++.+++++ +|.||.+++..
T Consensus 113 ~~y~f~~~~-~Gt~~yH~h~~ 132 (333)
T 1mzy_A 113 VVLRFKATR-AGAFVYHCAPG 132 (333)
T ss_dssp EEEEEECCS-CEEEEEECCCS
T ss_pred EEEEEECCC-CEEEEEeecCC
Confidence 999999985 79999999863
No 53
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.28 E-value=9.6e-11 Score=114.55 Aligned_cols=79 Identities=19% Similarity=0.298 Sum_probs=60.6
Q ss_pred CCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCC-ceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCe
Q 013075 111 SDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMN-QEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQT 189 (450)
Q Consensus 111 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R 189 (450)
...+++||+.. .|+|++++|+++++|+.|.... ..+.++++++.. +.||..+. .|.||++
T Consensus 53 ~~~~~~ng~~p---------gP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~~-------~i~pG~~ 113 (336)
T 1oe1_A 53 LQAMTFNGSMP---------GPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKLT-------NVNPGEQ 113 (336)
T ss_dssp EEEEEETTBSS---------CCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGGC-------CBCTTEE
T ss_pred EEEEEECCccC---------CCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcceE-------EeCCCCE
Confidence 35789999842 4899999999999999999743 456677777652 22332221 3999999
Q ss_pred EEEEEEeCCCCceeEEEeee
Q 013075 190 TNVLLTADQPPARYYMAAHA 209 (450)
Q Consensus 190 ~dv~v~~~~~~g~y~l~~~~ 209 (450)
++..+++++ +|.||.+++.
T Consensus 114 ~~y~f~~~~-~Gt~~yH~h~ 132 (336)
T 1oe1_A 114 ATLRFKADR-SGTFVYHCAP 132 (336)
T ss_dssp EEEEEECCS-CEEEEEECCC
T ss_pred EEEEEECCC-CeEEEEecCC
Confidence 999999985 7999999985
No 54
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.15 E-value=4.7e-12 Score=102.04 Aligned_cols=64 Identities=20% Similarity=0.237 Sum_probs=48.1
Q ss_pred eeeccCCCCCCC--CCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEec
Q 013075 2 SLFRHGVHQTRN--PWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVYP 67 (450)
Q Consensus 2 ~iH~HG~~~~~~--~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 67 (450)
++||||..+... ..+||++ .+++.|.||++++|+|.+++++|+||||||.|. .+||.|.|+|++
T Consensus 40 ~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~~H~-~~GM~G~i~V~~ 105 (105)
T 3cvb_A 40 NILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCAPHR-GAGMVGKITVEG 105 (105)
T ss_dssp EEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECTTTG-GGTCEEEEEECC
T ss_pred eEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeCCch-hcCCEEEEEEcC
Confidence 689999875431 0133333 457789999999999975468999999999442 459999999974
No 55
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.02 E-value=3.1e-09 Score=107.83 Aligned_cols=171 Identities=15% Similarity=0.167 Sum_probs=108.5
Q ss_pred eeec-cCCCCCCCCCCCCCCC-----cccCCCCCCCeEEEEEEeCCceeeeeeccChhhhhcce-e-----------EEE
Q 013075 2 SLFR-HGVHQTRNPWADGPEY-----VTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATV-Y-----------GAL 63 (450)
Q Consensus 2 ~iH~-HG~~~~~~~~~DGv~~-----~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl-~-----------G~l 63 (450)
.+|+ ||....- -..||.+- +++..|.||++++..++. .+.|+||++++......|+ . .+|
T Consensus 216 ~~~i~dg~~~~v-i~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 293 (451)
T 2uxt_A 216 QLQMNDGRPLHV-ISGDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLV 293 (451)
T ss_dssp EEEETTSCCEEE-EECSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEE
T ss_pred EEEECCCCeEEE-EEeCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcce
Confidence 3666 6644221 12798642 456779999999999987 5789999999875432221 1 111
Q ss_pred -EEecCCCC-----CCCC-----CC----CCCceeEEEeeeecCChHHHHHHhhhcCCCCCCCCceeeCCcccCCCCCCC
Q 013075 64 -IVYPRMGS-----PYPF-----PM----PKREIPILIGEWWDRDPMDVLRQALFTGGAPNISDALTINGQPGDLYRCSS 128 (450)
Q Consensus 64 -iV~~~~~~-----~~~~-----~~----~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~ 128 (450)
-....... ..|. .. .+.++.+.|+ ..++|||+....
T Consensus 294 l~~~~~~~~~~~~~~~p~~L~~~~~~~~~~~~~~~~~l~------------------------~~~~iNg~~f~~----- 344 (451)
T 2uxt_A 294 LTLRPTGLLPLVTDSLPMRLLPTEIMAGSPIRSRDISLG------------------------DDPGINGQLWDV----- 344 (451)
T ss_dssp EEEEECSCCC----CCCSCSSSSCCCCCCCSEEEEEEEC------------------------SSSSBTTBCCCT-----
T ss_pred EEEEecCCCcCccccCccccCCCCCCCCCCcceEEEEEe------------------------eEEEECCEeCCC-----
Confidence 11111100 0000 00 0000111110 046799986411
Q ss_pred CceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCcc---CceeecEEEecCCCeEEEEEEeCCCCce---
Q 013075 129 KETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYT---KPFPTSVIMIAPGQTTNVLLTADQPPAR--- 202 (450)
Q Consensus 129 ~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v---~P~~~~~i~l~~G~R~dv~v~~~~~~g~--- 202 (450)
..+.+.++.|++++|+|+|. ..+-|+++||.|+|++.||.++ +|...|+|.| |+++.|.+++++ +|.
T Consensus 345 -~~~~~~~~~G~~~~~~l~N~---~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dn-pg~~~g 417 (451)
T 2uxt_A 345 -NRIDVTAQQGTWERWTVRAD---EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQ-PSWAHF 417 (451)
T ss_dssp -TCCCEEEETTCEEEEEEEEE---EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCS-CCBTTB
T ss_pred -CCCcEEcCCCCEEEEEEECC---CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCC-CCCCCC
Confidence 12468999999999999998 4788999999999999999876 3678899999 999999999984 455
Q ss_pred -eEEEeeee
Q 013075 203 -YYMAAHAY 210 (450)
Q Consensus 203 -y~l~~~~~ 210 (450)
|.++|+..
T Consensus 418 ~w~~HCHil 426 (451)
T 2uxt_A 418 PFYFNSQTL 426 (451)
T ss_dssp CEEEEESSH
T ss_pred ceEEeCCch
Confidence 99999964
No 56
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=98.91 E-value=3.1e-08 Score=103.12 Aligned_cols=85 Identities=20% Similarity=0.243 Sum_probs=66.2
Q ss_pred CCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEE-EeCCCccCceeecEEEecCCCe
Q 013075 111 SDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVV-GVDTSYTKPFPTSVIMIAPGQT 189 (450)
Q Consensus 111 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi-a~DG~~v~P~~~~~i~l~~G~R 189 (450)
-..+++||+.. .|+|++++|+++++++.|........+|.+|..+.-- ..||.+- +..-.|.||++
T Consensus 22 ~~~~~~Ng~~P---------GP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~~I~PG~s 88 (552)
T 1aoz_A 22 NIVMGINGQFP---------GPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTAS----ISQCAINPGET 88 (552)
T ss_dssp EEEEEETTBSS---------CCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCE
T ss_pred EEEEEECCccC---------CCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcc----cccCCcCCCCe
Confidence 35789999852 4899999999999999999965677788888554211 1588753 22345789999
Q ss_pred EEEEEEeCCCCceeEEEeee
Q 013075 190 TNVLLTADQPPARYYMAAHA 209 (450)
Q Consensus 190 ~dv~v~~~~~~g~y~l~~~~ 209 (450)
++..++++ .+|.||.+++.
T Consensus 89 ~tY~f~~~-~~GT~wYHsH~ 107 (552)
T 1aoz_A 89 FFYNFTVD-NPGTFFYHGHL 107 (552)
T ss_dssp EEEEEECC-SCEEEEEEECS
T ss_pred EEEEEECC-CCEEEEEEECc
Confidence 99999996 57999999996
No 57
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=98.89 E-value=2.1e-08 Score=101.48 Aligned_cols=90 Identities=19% Similarity=0.207 Sum_probs=76.8
Q ss_pred ceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCcc-CceeecEEEecCCCeEE
Q 013075 113 ALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYT-KPFPTSVIMIAPGQTTN 191 (450)
Q Consensus 113 ~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v-~P~~~~~i~l~~G~R~d 191 (450)
.+.|||+.. .+ ....+.++.|++++|+|+|.+ ...+-||++||.|.|++.+|... .|...|++.|.+|++..
T Consensus 335 ~~~iNg~~~---~~---~~~~~~~~~g~~~~~~~~N~~-~~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~ 407 (439)
T 2xu9_A 335 RFFINGQVF---DH---RRVDLKGQAQTVEVWEVENQG-DMDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVAR 407 (439)
T ss_dssp EEEETTBCC---CT---TCCCEEECTTCEEEEEEEECS-SSCEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEE
T ss_pred eEeECCEEC---CC---CCCceecCCCCEEEEEEEcCC-CCCCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEE
Confidence 578999864 21 123588999999999999987 46788999999999999999876 57889999999999999
Q ss_pred EEEEeCCCCceeEEEeeee
Q 013075 192 VLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 192 v~v~~~~~~g~y~l~~~~~ 210 (450)
+.++++ .||.|.++|+..
T Consensus 408 i~f~ad-npG~w~~HCHil 425 (439)
T 2xu9_A 408 LLVPLR-EKGRTVFHCHIV 425 (439)
T ss_dssp EEEECC-SCEEEEEEESSH
T ss_pred EEEEcC-CCCCEEEECCcc
Confidence 999977 689999999964
No 58
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=98.88 E-value=7.1e-08 Score=98.76 Aligned_cols=227 Identities=13% Similarity=0.101 Sum_probs=135.8
Q ss_pred CCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCC----ceEEEEEeCcceEE-EEeCCCccCceeecEEEec
Q 013075 111 SDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMN----QEHFFGVANHKLTV-VGVDTSYTKPFPTSVIMIA 185 (450)
Q Consensus 111 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~----~~~~~~i~gh~~~v-ia~DG~~v~P~~~~~i~l~ 185 (450)
-..+++||+.- .|+|+++.|+++++++.|.... ....+|.+|-.+.. -..||.+- +..-.|.
T Consensus 22 ~~~~~~NG~~P---------GP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~ 88 (499)
T 3pxl_A 22 RQAVVVNGVTP---------GPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAF----INQCPIS 88 (499)
T ss_dssp EEEEEETTBSS---------CCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBC
T ss_pred EEEEEECCccc---------CCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCC
Confidence 35789999853 4999999999999999999865 35677887765432 35788642 1223588
Q ss_pred CCCeEEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhc
Q 013075 186 PGQTTNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTAR 265 (450)
Q Consensus 186 ~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 265 (450)
||+.++..+++++.+|.||.+++.... ....+.+ ++|....... . +......+... ...
T Consensus 89 PG~s~tY~f~~~~~~GT~wYHsH~~~q---~~~GL~G-~lIV~~~~~~---------~----~~~~~~d~~~~----~l~ 147 (499)
T 3pxl_A 89 PGHSFLYDFQVPDQAGTFWYHSHLSTQ---YCDGLRG-PFVVYDPNDP---------H----ASRYDVDNDDT----VIT 147 (499)
T ss_dssp TTCEEEEEEECSSCCEEEEEEECSTTG---GGGTCEE-EEEEECTTCT---------T----GGGCSBCSGGG----EEE
T ss_pred CCCeEEEEEEcCCCCceeeeeccchhH---Hhcccee-EEEEcCCccc---------c----cccCCCCCceE----EEE
Confidence 999999999996567999999996221 1122333 3333321111 0 00000000000 000
Q ss_pred ccccccCCCCcccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCC
Q 013075 266 IKSLHQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPV 345 (450)
Q Consensus 266 l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~ 345 (450)
|....-.... . ... . ....-.+.|||+...... .
T Consensus 148 l~Dw~~~~~~-~----------~~~------------~-p~~~d~~liNG~~~~~~~------------------~---- 181 (499)
T 3pxl_A 148 LADWYHTAAK-L----------GPR------------F-PGGADATLINGKGRAPSD------------------S---- 181 (499)
T ss_dssp EEEECSSCTT-T----------SCS------------S-CSSCSEEEETTBCCCTTC------------------T----
T ss_pred EEcccCCccc-c----------ccC------------C-CCCCcEEEECCCCcCCCC------------------C----
Confidence 0000000000 0 000 0 000124567875221000 0
Q ss_pred CCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCC
Q 013075 346 PPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLID 425 (450)
Q Consensus 346 ~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~ 425 (450)
......+.++.|++++|.|.|.+. ...+-||++||.|+||+.. |. +..
T Consensus 182 ------------------~~~~~~~~v~~G~~~RlRliNa~~--~~~~~~~i~gh~~~via~D-G~-----------~~~ 229 (499)
T 3pxl_A 182 ------------------VAELSVIKVTKGKRYRFRLVSLSC--NPNHTFSIDGHNLTIIEVD-SV-----------NSQ 229 (499)
T ss_dssp ------------------TCCCCEEEECTTCEEEEEEEECCS--SCCEEEEETTBCEEEEEET-TE-----------EEE
T ss_pred ------------------CCCcceEEEcCCCEEEEEEEecCC--CeeEEEEECCCeEEEEEEC-Cc-----------ccC
Confidence 011246899999999999999763 4568999999999999973 21 234
Q ss_pred CCccceEEeCCCCEEEEEEEccCC
Q 013075 426 PPRRNTIGTPPGGWVAVRFVAENP 449 (450)
Q Consensus 426 P~~RDTv~vp~~g~~viRf~adNP 449 (450)
|...|++.|.+|+.+.|-++++.+
T Consensus 230 P~~~~~l~i~pGqR~dvlv~~~~~ 253 (499)
T 3pxl_A 230 PLEVDSIQIFAAQRYSFVLDANQA 253 (499)
T ss_dssp EEEESBEEECTTCEEEEEEECCSC
T ss_pred ceEeeeEEECCCcEEEEEEECCCC
Confidence 667899999999999988888765
No 59
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=98.84 E-value=7e-08 Score=98.75 Aligned_cols=229 Identities=12% Similarity=0.110 Sum_probs=135.5
Q ss_pred CCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCC----ceEEEEEeCcceEE-EEeCCCccCceeecEEEec
Q 013075 111 SDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMN----QEHFFGVANHKLTV-VGVDTSYTKPFPTSVIMIA 185 (450)
Q Consensus 111 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~----~~~~~~i~gh~~~v-ia~DG~~v~P~~~~~i~l~ 185 (450)
-..+++||+.- .|+|+++.|+++++++.|.... ....++.+|-.+.- -..||.+- +..-.|.
T Consensus 23 ~~~~~~NG~~P---------GP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~ 89 (495)
T 3t6v_A 23 RPAVNAGGTFP---------GPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAF----ITQCPII 89 (495)
T ss_dssp EEEEEETTSSS---------CCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBC
T ss_pred EEEEEECCccc---------CCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCC
Confidence 35789999852 4999999999999999999865 35667887765431 35788642 1223589
Q ss_pred CCCeEEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhc
Q 013075 186 PGQTTNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTAR 265 (450)
Q Consensus 186 ~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 265 (450)
||+.++..+++++.+|.||.+++.... ....+.+ ++|....... . +......+... ...
T Consensus 90 PG~sftY~f~~~~~~GT~wYHsH~~~q---~~~GL~G-~lIV~~~~~~---------~----~~~~~~d~~e~----~l~ 148 (495)
T 3t6v_A 90 VGNSFSYNFNVPGMAGTYWYHSHLTTQ---YCDGLRG-PFVVYDPNDP---------D----ANLYDVDDDTT----IIT 148 (495)
T ss_dssp TTCEEEEEEECTTCCEEEEEEECSTTG---GGGTCEE-EEEEECTTCT---------T----GGGCSBCSGGG----EEE
T ss_pred CCCeEEEEEEeCCCCceeeeeccchhH---HhcCceE-EEEEcCcccc---------c----cccCCCCCcee----EEE
Confidence 999999999996567999999996321 1122333 3333321111 0 00000001000 000
Q ss_pred ccccccCCCCcccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCC
Q 013075 266 IKSLHQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPV 345 (450)
Q Consensus 266 l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~ 345 (450)
|....-. . +..+ . .. . ....-...|||+......
T Consensus 149 l~Dw~~~--~---~~~~----~-~~------------~-p~~~d~~liNG~g~~~~~----------------------- 182 (495)
T 3t6v_A 149 LADWYHV--L---AKEM----G-AG------------G-AITADSTLIDGLGRTHVN----------------------- 182 (495)
T ss_dssp EEEECSS--C---GGGS----C-SS------------S-CCCCSEEEETTBCCBSSS-----------------------
T ss_pred EecccCC--c---hhhh----c-cC------------C-CCCCcEEEECCcCcCCCC-----------------------
Confidence 0000000 0 0000 0 00 0 000114467875221000
Q ss_pred CCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCC
Q 013075 346 PPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLID 425 (450)
Q Consensus 346 ~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~ 425 (450)
|. ......+.++.|+.++|.|.|.+. ...+.|||+||.|+||+.. |. +..
T Consensus 183 -----------~~-----~~~~~~~~v~~G~~~RlRliN~~~--~~~~~~~i~gh~~~via~D-G~-----------~~~ 232 (495)
T 3t6v_A 183 -----------VA-----AVPLSVITVEVGKRYRMRLVSISC--DPNYDFSIDGHDMTIIETD-GV-----------DSQ 232 (495)
T ss_dssp -----------CC-----CCCCCEEEECTTCEEEEEEEECCS--SCCEEEEETTCCEEEEEET-TE-----------EEE
T ss_pred -----------cc-----cCCceEEEEcCCCEEEEEEEecCC--CeeEEEEECCCeEEEEEeC-Cc-----------ccC
Confidence 00 001236899999999999999763 3568999999999999973 21 234
Q ss_pred CCccceEEeCCCCEEEEEEEccCC
Q 013075 426 PPRRNTIGTPPGGWVAVRFVAENP 449 (450)
Q Consensus 426 P~~RDTv~vp~~g~~viRf~adNP 449 (450)
|...|++.|.+|+.+-|-++++.+
T Consensus 233 P~~~~~l~i~pGqR~dvlv~~~~~ 256 (495)
T 3t6v_A 233 ELTVDEIQIFAAQRYSFVLNANQP 256 (495)
T ss_dssp EEEESBEEECTTCEEEEEEECCSC
T ss_pred CEEeeeEEEcCceEEEEEEECCCC
Confidence 667899999999988888888765
No 60
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=98.81 E-value=1.2e-07 Score=98.81 Aligned_cols=225 Identities=14% Similarity=0.073 Sum_probs=133.5
Q ss_pred CCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceE-EEEeCCCccCceeecEEEecC-CC
Q 013075 111 SDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLT-VVGVDTSYTKPFPTSVIMIAP-GQ 188 (450)
Q Consensus 111 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~-via~DG~~v~P~~~~~i~l~~-G~ 188 (450)
...+++||+.. .|+|++++|+++++++.|........++.+|-.+. --..||.+- +..-.|.| |+
T Consensus 55 ~~~~~~Ng~~P---------GP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~----~tq~~I~P~G~ 121 (559)
T 2q9o_A 55 EKVMLINGNIM---------GPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANG----VTECPIPPKGG 121 (559)
T ss_dssp EEEEEETTBSS---------CCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTTE
T ss_pred eEEEEECCccc---------CCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCc----cccCccCCCCC
Confidence 34789999853 49999999999999999999666677888876542 134688752 12234789 99
Q ss_pred eEEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhcccc
Q 013075 189 TTNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKS 268 (450)
Q Consensus 189 R~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~ 268 (450)
+++..+++++ +|.||.+++... .....+.+.-||. . ... ..+ +.... ...|..
T Consensus 122 ~~~Y~f~~~q-~GT~wYH~H~~~---q~~~Gl~G~liV~-~-~~~-----------------~~~-d~d~~---~l~l~D 174 (559)
T 2q9o_A 122 QRTYRWRARQ-YGTSWYHSHFSA---QYGNGVVGTIQIN-G-PAS-----------------LPY-DIDLG---VFPITD 174 (559)
T ss_dssp EEEEEEECCS-CEEEEEEECSTT---GGGGTCEEEEEEE-C-CCS-----------------SCC-SEEEE---EEEEEE
T ss_pred eEEEEEECCC-CEEEEEEEcccc---hhcCCceEEEEec-C-CCc-----------------CCC-cccce---EEEEec
Confidence 9999999986 799999999621 1122233333332 2 111 000 00000 000000
Q ss_pred cccCCCCcccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCc
Q 013075 269 LHQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPI 348 (450)
Q Consensus 269 l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~ 348 (450)
..-. .+..+. ..... +.....-...|||+... +.. .
T Consensus 175 w~~~-----~~~~~~--~~~~~------------~~~~~~d~~liNG~~~~-~~~-----------------~------- 210 (559)
T 2q9o_A 175 YYYR-----AADDLV--HFTQN------------NAPPFSDNVLINGTAVN-PNT-----------------G------- 210 (559)
T ss_dssp ECSS-----CHHHHH--HHHTT------------SCCCCBSEEEETTBCBC-TTT-----------------C-------
T ss_pred cccC-----CHHHHh--hhhhc------------CCCCccceeEECCcccc-CcC-----------------C-------
Confidence 0000 000000 00000 00000113457876432 000 0
Q ss_pred ccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCc
Q 013075 349 IFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPR 428 (450)
Q Consensus 349 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~ 428 (450)
......+.++.|++++|.|.|.+. ...|-|||+||.|+||+.. |. ...|..
T Consensus 211 ---------------~g~~~~~~v~~g~~~RlRliNa~~--~~~~~~~i~gh~~~vi~~D-G~-----------~~~p~~ 261 (559)
T 2q9o_A 211 ---------------EGQYANVTLTPGKRHRLRILNTST--ENHFQVSLVNHTMTVIAAD-MV-----------PVNAMT 261 (559)
T ss_dssp ---------------CBCCCEEEECTTCEEEEEEEECCS--SCCEEEEETTBCEEEEEET-TE-----------EEEEEE
T ss_pred ---------------CCCceEEEEcCCCEEEEEEEecCC--CceEEEEECCCceEEEecC-Cc-----------ccCceE
Confidence 001236889999999999999863 3468999999999999973 21 124667
Q ss_pred cceEEeCCCCEEEEEEEccC
Q 013075 429 RNTIGTPPGGWVAVRFVAEN 448 (450)
Q Consensus 429 RDTv~vp~~g~~viRf~adN 448 (450)
.|++.|.+|+.+-|-++++.
T Consensus 262 ~~~l~l~pgeR~dvlv~~~~ 281 (559)
T 2q9o_A 262 VDSLFLAVGQRYDVVIDASR 281 (559)
T ss_dssp ESCEEECTTCEEEEEEECCS
T ss_pred eCeEEEccEEEEEEEEECCC
Confidence 78999999988888888765
No 61
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=98.81 E-value=8.3e-08 Score=98.71 Aligned_cols=225 Identities=14% Similarity=0.148 Sum_probs=133.6
Q ss_pred CCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCC----ceEEEEEeCcceE-EEEeCCCccCceeecEEEec
Q 013075 111 SDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMN----QEHFFGVANHKLT-VVGVDTSYTKPFPTSVIMIA 185 (450)
Q Consensus 111 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~----~~~~~~i~gh~~~-via~DG~~v~P~~~~~i~l~ 185 (450)
-..+++||+.+ |+|++++|+++++++.|.... ....++.+|-.+. --..||.+-. ..-.|.
T Consensus 23 ~~~~~~NG~~G----------P~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~v----tq~~I~ 88 (503)
T 1hfu_A 23 RAGILVNGVHG----------PLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGV----NQCPIS 88 (503)
T ss_dssp EEEEEETTBSS----------CEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTT----TBCCBC
T ss_pred EEEEEECCccC----------CcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccc----ccCCcC
Confidence 35789999753 999999999999999999863 6677788776542 1346887421 223478
Q ss_pred CCCeEEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhc
Q 013075 186 PGQTTNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTAR 265 (450)
Q Consensus 186 ~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 265 (450)
||+.++..++..+.+|.||.+++.... ....+.+.-||+ .. .+ +. +..-...+. +....
T Consensus 89 PG~~~~Y~f~~~~~~GT~wYH~H~~~q---~~~Gl~G~liV~-~~-~~--------~~----~~~~~~d~~----e~~l~ 147 (503)
T 1hfu_A 89 PGHAFLYKFTPAGHAGTFWYHSHFGTQ---YCDGLRGPMVIY-DD-ND--------PH----AALYDEDDE----NTIIT 147 (503)
T ss_dssp TTCEEEEEECCTTCCEEEEEEECSTTG---GGGTCEEEEEEE-CT-TC--------TT----GGGCSBCST----TSEEE
T ss_pred CCCeEEEEEEeCCCCccEEEEecchhh---hhCcceeeEEEc-CC-CC--------Cc----ccCCCCCCc----eEEEE
Confidence 999999999965567999999996321 112233333332 21 11 00 000000000 00000
Q ss_pred ccccccCCCCcccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCC
Q 013075 266 IKSLHQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPV 345 (450)
Q Consensus 266 l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~ 345 (450)
|....-. ...... .+ + .+ -.+.|||+.+.....
T Consensus 148 l~Dw~~~-~~~~~~-------~~-----~----------~~--d~~liNG~~~~~~~~---------------------- 180 (503)
T 1hfu_A 148 LADWYHI-PAPSIQ-------GA-----A----------QP--DATLINGKGRYVGGP---------------------- 180 (503)
T ss_dssp EEEECSS-CGGGCC-------------------------CC--SEEEETTBCCBTTCC----------------------
T ss_pred EcccccC-ChHHhc-------CC-----C----------CC--CEEEECcccccCCCC----------------------
Confidence 0000000 000000 00 0 11 134578864310000
Q ss_pred CCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCC
Q 013075 346 PPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLID 425 (450)
Q Consensus 346 ~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~ 425 (450)
......+.++.|+.++|.|.|.+. ...|-|||+||.|.||+.. |. +..
T Consensus 181 ------------------~~~~~~~~v~~g~~~RlRliN~~~--~~~~~~~i~gh~~~vi~~D-G~-----------~~~ 228 (503)
T 1hfu_A 181 ------------------AAELSIVNVEQGKKYRMRLISLSC--DPNWQFSIDGHELTIIEVD-GE-----------LTE 228 (503)
T ss_dssp ------------------CCCCCEEEECTTCEEEEEEEECCS--SCCEEEEETTCCEEEEEET-TE-----------EEE
T ss_pred ------------------CCcceEEEEcCCCEEEEEEEecCC--cccEEEEEcCceEEEEecc-Cc-----------ccc
Confidence 011246889999999999999763 3479999999999999973 21 124
Q ss_pred CCccceEEeCCCCEEEEEEEccCC
Q 013075 426 PPRRNTIGTPPGGWVAVRFVAENP 449 (450)
Q Consensus 426 P~~RDTv~vp~~g~~viRf~adNP 449 (450)
|...|++.|.+|+.+.|-++++.+
T Consensus 229 p~~~~~l~l~pgeR~dvlv~~~~~ 252 (503)
T 1hfu_A 229 PHTVDRLQIFTGQRYSFVLDANQP 252 (503)
T ss_dssp EEEESBEEECTTCEEEEEEECCSC
T ss_pred ccccCeEEEcccceEEEEEEcCCC
Confidence 667899999999988888888763
No 62
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=98.81 E-value=8.7e-08 Score=98.95 Aligned_cols=232 Identities=13% Similarity=0.137 Sum_probs=134.9
Q ss_pred CCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCC----ceEEEEEeCcceE-EEEeCCCccCceeecEEEec
Q 013075 111 SDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMN----QEHFFGVANHKLT-VVGVDTSYTKPFPTSVIMIA 185 (450)
Q Consensus 111 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~----~~~~~~i~gh~~~-via~DG~~v~P~~~~~i~l~ 185 (450)
-..+++||+.. .|+|++++|+++++++.|.... ....++.+|-.+. --..||.+- +..-.|.
T Consensus 43 ~~~~~~NG~~P---------GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~~I~ 109 (521)
T 1v10_A 43 RSAVTAEGTTI---------APLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAF----VNQCPII 109 (521)
T ss_dssp EEEEEESSSSS---------CCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBT----TTBCCBC
T ss_pred EEEEEECCccC---------CCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcc----eeeCCcC
Confidence 35789999852 4899999999999999999863 6677788776542 124688742 1223478
Q ss_pred CCCeEEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhc
Q 013075 186 PGQTTNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTAR 265 (450)
Q Consensus 186 ~G~R~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 265 (450)
||+.++..++..+.+|.||.+++.... ....+.+.-|| .... + +. +..-...+. +....
T Consensus 110 PG~s~~Y~f~~~~~~GT~wYH~H~~~q---~~~Gl~G~liV-~~~~-~--------~~----~~~~~~d~~----e~~l~ 168 (521)
T 1v10_A 110 PNESFVYDFVVPGQAGTYWYHSHLSTQ---YCDGLRGAFVV-YDPN-D--------PH----LSLYDVDDA----STVIT 168 (521)
T ss_dssp TTEEEEEEEECTTCCEEEEEEECSTTG---GGGTCEEEEEE-ECTT-C--------TT----GGGCSBCSG----GGEEE
T ss_pred CCCeEEEEEecCCCCccEEEEeccCCc---hhcCceEEEEE-cCCc-c--------cc----cccCCCCCc----eeEEE
Confidence 999999999965567999999996321 11223333333 2211 1 00 000000000 00001
Q ss_pred ccccccCCCCcccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCC
Q 013075 266 IKSLHQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPV 345 (450)
Q Consensus 266 l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~ 345 (450)
|....-. .+..+....+.. .+.+ -...|||+.+.....
T Consensus 169 l~D~~~~-----~~~~~~~~~~~~-------------~~~~--d~~liNG~~~~~~~~---------------------- 206 (521)
T 1v10_A 169 IADWYHS-----LSTVLFPNPNKA-------------PPAP--DTTLINGLGRNSANP---------------------- 206 (521)
T ss_dssp EEEECSS-----CCC-------CC-------------CSCC--SEEEETTBCCCSSCG----------------------
T ss_pred EcccccC-----CHHHHhhccCCC-------------CCCC--CEEEECCcccCCCCC----------------------
Confidence 1110000 000000000000 0011 144688864310000
Q ss_pred CCcccccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCC
Q 013075 346 PPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLID 425 (450)
Q Consensus 346 ~p~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~ 425 (450)
.......+.++.|+.++|.|.|.+. ...|-|||+||.|.||+.. |. +..
T Consensus 207 -----------------~~~~~~~~~v~~G~~~RlRliNa~~--~~~~~~~i~gh~~~vi~~D-G~-----------~~~ 255 (521)
T 1v10_A 207 -----------------SAGQLAVVSVQSGKRYRFRIVSTSC--FPNYAFSIDGHRMTVIEVD-GV-----------SHQ 255 (521)
T ss_dssp -----------------GGSCCCEEEECTTCEEEEEEEECCS--SCCEEEEETTCCEEEEEET-TE-----------EEE
T ss_pred -----------------CCCCceEEEECCCCEEEEEEEecCC--cccEEEEECCCeEEEEecC-Cc-----------ccc
Confidence 0011246899999999999999763 3479999999999999973 21 124
Q ss_pred CCccceEEeCCCCEEEEEEEccCC
Q 013075 426 PPRRNTIGTPPGGWVAVRFVAENP 449 (450)
Q Consensus 426 P~~RDTv~vp~~g~~viRf~adNP 449 (450)
|...|++.|.+|+.+.|-++++.+
T Consensus 256 p~~~~~l~l~pgqR~dvlv~~~~~ 279 (521)
T 1v10_A 256 PLTVDSLTIFAGQRYSVVVEANQA 279 (521)
T ss_dssp EEEESBEEECTTCEEEEEEECCSC
T ss_pred ceeeeeEEEcccceEEEEEEcCCC
Confidence 667899999999988888888763
No 63
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.79 E-value=1.3e-07 Score=98.22 Aligned_cols=234 Identities=14% Similarity=0.067 Sum_probs=136.4
Q ss_pred CCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceE-EEEeCCCccCceeecEEEecCCCe
Q 013075 111 SDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLT-VVGVDTSYTKPFPTSVIMIAPGQT 189 (450)
Q Consensus 111 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~-via~DG~~v~P~~~~~i~l~~G~R 189 (450)
-..+++||+.- .|+|++++|+++++++.|........+|.+|-... --..||.+- +..-.|.||+.
T Consensus 86 ~~~~~~NG~~P---------GP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~----vTq~pI~PG~s 152 (580)
T 3sqr_A 86 RSAMTFNGTVP---------GPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPG----VTQCPIAPGDT 152 (580)
T ss_dssp EEEEEETTBSS---------CCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBT----TTBCCBCTTCE
T ss_pred EEEEEECCccC---------CceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCc----cccCCCCCCCe
Confidence 45789999852 48999999999999999998656677777776543 135788742 12235899999
Q ss_pred EEEEEEeCCCCceeEEEeeeeccccccCCCccEEEEEEeccCCCCCCCCCCCCCCCcCCCCCCCCCccchhhhhhccccc
Q 013075 190 TNVLLTADQPPARYYMAAHAYNTANAAFDNTTTTAILEYKSAPFNGKKGKSRSSAPIFPILPGFNDTATATAFTARIKSL 269 (450)
Q Consensus 190 ~dv~v~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l 269 (450)
+...++++| +|.||.+++.... ..+.+.+.-|| +..... .+ |.... ...|...
T Consensus 153 ftY~f~~~q-~GT~WYHsH~~~q---~~~GL~G~lIV-~~p~~~------------------~y-D~d~~---~l~l~Dw 205 (580)
T 3sqr_A 153 LTYKFQVTQ-YGTTWYHSHFSLQ---YGDGLFGPLII-NGPATA------------------DY-DEDVG---VIFLQDW 205 (580)
T ss_dssp EEEEEECCC-CEEEEEEECSTTG---GGGTCEEEEEE-ECCCSS------------------CC-SEEEE---EEEEEEE
T ss_pred EEEEEECCC-CcceEEeeccccc---ccCcCEEEEEe-eCcccC------------------CC-Cccce---EEEEEEE
Confidence 999999985 6999999996211 11223333333 321100 00 00000 0000000
Q ss_pred ccCCCCcccceeEEEEeccceeccCCCCCCCccCCCCCeeeeeeccccccCCCchhhHHHHHhCCCCCccCCCCCCCCcc
Q 013075 270 HQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINNISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPII 349 (450)
Q Consensus 270 ~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~~ll~~~~~~~~~~~~~~~~~~~p~~ 349 (450)
.-. ....... . .... + ....-...|||+....-+. .+ +
T Consensus 206 ~~~-~~~~~~~----~-~~~~------------~-~~~~d~~liNG~~~~~c~~-----------~~----~-------- 243 (580)
T 3sqr_A 206 AHE-SVFEIWD----T-ARLG------------A-PPALENTLMNGTNTFDCSA-----------ST----D-------- 243 (580)
T ss_dssp CSS-CHHHHHH----H-HTTS------------C-CCCBSEEEETTBCCCCCTT-----------CC----C--------
T ss_pred ecC-CHHHHHH----H-Hhcc------------C-CCCCceEEECCcccCCCcc-----------cc----c--------
Confidence 000 0000000 0 0000 0 0001134578763310000 00 0
Q ss_pred cccCCCCCCCCcCCCCCceeEEeecCCEEEEEEEeCCCCCCCCCCcccCCCceEEEEecCCCCCCCCCCCCCCCCCCCcc
Q 013075 350 FDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRR 429 (450)
Q Consensus 350 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~R 429 (450)
..| ........+.++.|++++|.|+|.+. ...+-||++||.|.||+.. |. ...|...
T Consensus 244 --------~~~-~~~~~~~~~~v~~G~~yRlRlINa~~--~~~~~~~i~gh~~~VIa~D-G~-----------~v~P~~~ 300 (580)
T 3sqr_A 244 --------PNC-VGGGKKFELTFVEGTKYRLRLINVGI--DSHFEFAIDNHTLTVIAND-LV-----------PIVPYTT 300 (580)
T ss_dssp --------TTB-CCCCCCCEEECCTTCEEEEEEEECCS--SCCEEEEETTCCEEEEEET-TE-----------EEEEEEE
T ss_pred --------ccc-ccCCCceeEEEcCCCEEEEEEEeccC--CceeeEEeCCceEEEEEeC-Cc-----------cCCceEe
Confidence 000 00112347889999999999999763 3468999999999999973 21 2246778
Q ss_pred ceEEeCCCCEEEEEEEccCC
Q 013075 430 NTIGTPPGGWVAVRFVAENP 449 (450)
Q Consensus 430 DTv~vp~~g~~viRf~adNP 449 (450)
|++.|.+|+.+-|-++++.+
T Consensus 301 ~~l~i~pGqRydVlv~a~~~ 320 (580)
T 3sqr_A 301 DTLLIGIGQRYDVIVEANAA 320 (580)
T ss_dssp SSEEECTTCEEEEEEECCSC
T ss_pred eEEEEccceEEEEEEEeCCC
Confidence 99999999999999998764
No 64
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=98.72 E-value=2.3e-07 Score=95.93 Aligned_cols=86 Identities=21% Similarity=0.201 Sum_probs=67.8
Q ss_pred CCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEE-EEeCCCccCceeecEEEecCCCe
Q 013075 111 SDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTV-VGVDTSYTKPFPTSVIMIAPGQT 189 (450)
Q Consensus 111 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~v~P~~~~~i~l~~G~R 189 (450)
-..+++||+.- .|+|++++|+++++++.|.-......+|.+|-.+.. -..||.+- +..-.|.||+.
T Consensus 22 ~~~~~~Ng~~P---------GP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~----vtq~pI~PG~~ 88 (534)
T 1zpu_A 22 RPVITCNGQFP---------WPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPF----LTQCPIAPGST 88 (534)
T ss_dssp EEEEEETTBSS---------CCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCE
T ss_pred EEEEEECCccC---------CccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCc----cccCCcCCCCe
Confidence 35789999852 489999999999999999986567778888765432 35788752 12234889999
Q ss_pred EEEEEEeCCCCceeEEEeee
Q 013075 190 TNVLLTADQPPARYYMAAHA 209 (450)
Q Consensus 190 ~dv~v~~~~~~g~y~l~~~~ 209 (450)
++..+++++.+|.||.+++.
T Consensus 89 ~~Y~f~~~~~~GT~wYH~H~ 108 (534)
T 1zpu_A 89 MLYNFTVDYNVGTYWYHSHT 108 (534)
T ss_dssp EEEEEECSSCCEEEEEECCS
T ss_pred EEEEEEeCccceeEEEEEcC
Confidence 99999998667999999996
No 65
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.66 E-value=1.3e-08 Score=87.44 Aligned_cols=62 Identities=13% Similarity=0.201 Sum_probs=44.7
Q ss_pred eeccCCCCCCCCCCCC------CCCcc-cCCCCCCC--eEEEEEEeCCceeeeeeccChhhhhc-ceeEEEEEe
Q 013075 3 LFRHGVHQTRNPWADG------PEYVT-QCPIQPGR--SYTYRFTIEDQEGTLWWHAHSRWLRA-TVYGALIVY 66 (450)
Q Consensus 3 iH~HG~~~~~~~~~DG------v~~~t-q~~i~pg~--~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~ 66 (450)
.|++.+.+.+.++++. +++.. ...|.||+ +++|+|++ ++||||||||..+++. ||+|.|+|+
T Consensus 83 ~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 83 GHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp CCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred eeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 5777777666554331 11100 11689999 99999974 8999999999877774 999999985
No 66
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=98.56 E-value=5.1e-07 Score=91.38 Aligned_cols=78 Identities=12% Similarity=0.141 Sum_probs=63.8
Q ss_pred eeeCCc-ccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEE
Q 013075 114 LTINGQ-PGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNV 192 (450)
Q Consensus 114 ~liNG~-~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv 192 (450)
+++||+ .. .|+|++++|+++++++.|.-. ....++++|-.+. -+.||.+- -.|.||+.++.
T Consensus 28 ~~~Ng~~~p---------GP~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~-~~~DG~~~-------~~i~PG~~~~Y 89 (448)
T 3aw5_A 28 SGYMAEGVL---------NPTIILRRGQRVDMTLKNKLT-EPTIVHWHGFDVN-WHNDAHPS-------FAITPGESYNY 89 (448)
T ss_dssp TEEEETTEE---------SCEEEEETTCEEEEEEEECSS-SCBCEEEETCCCC-HHHHTCGG-------GCBCTTCEEEE
T ss_pred EEECCcccc---------CceEEEeCCCEEEEEEEECCC-CceeEEeCCccCC-CccCCCCC-------ccCCCCCEEEE
Confidence 689998 42 389999999999999999984 5677888886643 24688754 45789999999
Q ss_pred EEEeCCCCceeEEEeee
Q 013075 193 LLTADQPPARYYMAAHA 209 (450)
Q Consensus 193 ~v~~~~~~g~y~l~~~~ 209 (450)
.+++++.+|.||.+++.
T Consensus 90 ~f~~~~~~GT~wYH~H~ 106 (448)
T 3aw5_A 90 SFDVVNRAGTYLYHPHP 106 (448)
T ss_dssp EEECCSCSEEEEEEECC
T ss_pred EEEcCCCCCceEeccCC
Confidence 99999778999999994
No 67
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.55 E-value=5.3e-08 Score=78.10 Aligned_cols=45 Identities=18% Similarity=0.283 Sum_probs=38.4
Q ss_pred CCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEe
Q 013075 16 ADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVY 66 (450)
Q Consensus 16 ~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 66 (450)
+||.....+..|.||++++|+| +++|+|||||+.|. ||.|.|+|+
T Consensus 61 ~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H~---gM~G~i~V~ 105 (105)
T 2ov0_A 61 VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTPHP---FMRGKVVVE 105 (105)
T ss_dssp TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT---TCEEEEEEC
T ss_pred CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC---CCEEEEEEC
Confidence 4676666677799999999998 58999999999875 999999985
No 68
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=98.50 E-value=1e-06 Score=91.04 Aligned_cols=82 Identities=18% Similarity=0.242 Sum_probs=65.0
Q ss_pred CCceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeE
Q 013075 111 SDALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTT 190 (450)
Q Consensus 111 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~ 190 (450)
...+++||+.. .|+|+++.|+++++++.|... ....+|++|-...- ..||.+-. .|.||+.+
T Consensus 57 ~~~~~~NG~~P---------GPtI~~~~Gd~v~v~v~N~l~-~~tsiHwHGl~~~~-~~DG~~~~-------~i~PG~~~ 118 (534)
T 3abg_A 57 ADLVGYDGMSP---------GPTFQVPRGVETVVRFINNAE-APNSVHLHGSFSRA-AFDGWAED-------ITEPGSFK 118 (534)
T ss_dssp EECBEETSCSS---------EEEEEEETTCCEEEEEEECSS-SCBCEEEETCCCCT-TTTTCSSS-------CBSSCSCC
T ss_pred eeEEEECCcCc---------CceEEEeCCcEEEEEEEECCC-CCceEEECCCcCCC-CCCCCCCC-------CCCCCCeE
Confidence 34678999752 599999999999999999985 45678888765332 57886422 27899999
Q ss_pred EEEEEeCCCCceeEEEeeee
Q 013075 191 NVLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 191 dv~v~~~~~~g~y~l~~~~~ 210 (450)
+..+.+++..|.||.+++..
T Consensus 119 ~Y~f~~~~~~GT~WYH~H~~ 138 (534)
T 3abg_A 119 DYYYPNRQSARTLWYHDHAM 138 (534)
T ss_dssp CEEECCCSSSCEEEEEECCT
T ss_pred EEEEecCCcceeEEEecCcc
Confidence 99999987779999999963
No 69
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=98.46 E-value=4.8e-07 Score=92.11 Aligned_cols=90 Identities=17% Similarity=0.180 Sum_probs=76.5
Q ss_pred eeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCc---eeecEEEecCCCeE
Q 013075 114 LTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKP---FPTSVIMIAPGQTT 190 (450)
Q Consensus 114 ~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P---~~~~~i~l~~G~R~ 190 (450)
++|||+... ...+.++++.|+++||+|+|.+....+.|||+||.|.|++.||....| ...|+|.|. |++.
T Consensus 380 ~~ING~~~~------~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~ 452 (488)
T 3od3_A 380 NKINGQAFD------MNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVS 452 (488)
T ss_dssp EEETTBCCC------TTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEE
T ss_pred eeECCeeCC------CCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEE
Confidence 699999742 123568999999999999999866678999999999999999987754 468999999 9999
Q ss_pred EEEEEeCCC---CceeEEEeeee
Q 013075 191 NVLLTADQP---PARYYMAAHAY 210 (450)
Q Consensus 191 dv~v~~~~~---~g~y~l~~~~~ 210 (450)
.|++.+++. +|.|.++|+..
T Consensus 453 ~i~~~f~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 453 EVLVKFNHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp EEEECBCSCCCGGGCEEEEESSH
T ss_pred EEEEEeccCCCCCCCEEEeCCch
Confidence 999999752 47999999964
No 70
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=98.44 E-value=7.2e-07 Score=90.75 Aligned_cols=90 Identities=13% Similarity=0.181 Sum_probs=77.1
Q ss_pred ceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEe--CCCcc---CceeecEEEecCC
Q 013075 113 ALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGV--DTSYT---KPFPTSVIMIAPG 187 (450)
Q Consensus 113 ~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~--DG~~v---~P~~~~~i~l~~G 187 (450)
.++|||+... ...+.+.++.|++++|+|+|.+ ...+.|+|+||.|.|++. ||... ++...|+|.|.||
T Consensus 372 ~~~iNG~~~~------~~~~~~~~~~G~~v~w~l~N~~-~~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg 444 (481)
T 3zx1_A 372 MFLINRKSYD------LKRIDLSSKLGVVEDWIVINKS-HMDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPN 444 (481)
T ss_dssp TEEETTBCCC------TTCCCEEEETTCCEEEEEEECS-SSCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTT
T ss_pred eeEECCEeCC------CCCceEEeCCCCEEEEEEEcCC-CCceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCC
Confidence 4789998641 1236789999999999999965 568889999999999999 99865 3568899999999
Q ss_pred CeEEEEEEeCCCCceeEEEeeee
Q 013075 188 QTTNVLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 188 ~R~dv~v~~~~~~g~y~l~~~~~ 210 (450)
++..|.++++ .+|.|.++|+..
T Consensus 445 ~~~~i~~~~d-~pG~w~~HCHil 466 (481)
T 3zx1_A 445 EELRLRMKQD-FKGLRMYHCHIL 466 (481)
T ss_dssp CEEEEEECCC-SCEEEEEEESSH
T ss_pred CEEEEEEEcC-CCeeEEEEcCCh
Confidence 9999999997 689999999864
No 71
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.41 E-value=6.4e-08 Score=78.56 Aligned_cols=43 Identities=26% Similarity=0.241 Sum_probs=37.3
Q ss_pred cCCCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEec
Q 013075 24 QCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVYP 67 (450)
Q Consensus 24 q~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 67 (450)
++.+.||++++|+|.+ +++|+||||||.+...++|.|.|+|.+
T Consensus 70 ~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 4569999999999986 899999999998765556999999974
No 72
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=98.40 E-value=9e-07 Score=92.51 Aligned_cols=90 Identities=14% Similarity=0.124 Sum_probs=75.0
Q ss_pred ceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCC--------------------
Q 013075 113 ALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTS-------------------- 172 (450)
Q Consensus 113 ~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~-------------------- 172 (450)
.+.|||+.. ...+.+.++.|++++|+|+|.+ ...+.|+|++|.|.|++.+|.
T Consensus 460 ~~~iNG~~~-------~~~~~~~v~~G~~v~w~l~N~~-~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~ 531 (612)
T 2g23_A 460 TYRRTAATF-------NDGLGFTIGEGTHEQWTFLNLS-PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDP 531 (612)
T ss_dssp EEEEEECST-------TSCCCEEEETTCEEEEEEEECS-SSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEE
T ss_pred EEEECCccC-------CCCCceEecCCCEEEEEEEeCC-CCCCCeEEcCceEEEecccCcccccccccccCccccccccc
Confidence 578999864 2347899999999999999997 557889999999999987531
Q ss_pred ----cc---CceeecEEEecCCCeEEEEEEeCCCCceeEEEeeee
Q 013075 173 ----YT---KPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 173 ----~v---~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~ 210 (450)
.+ ++...|+|.|.||++..|.++++..+|.|.++|+..
T Consensus 532 g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil 576 (612)
T 2g23_A 532 DTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp EEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSH
T ss_pred ccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCch
Confidence 12 234689999999999999999997789999999964
No 73
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.21 E-value=7.4e-07 Score=71.36 Aligned_cols=42 Identities=19% Similarity=0.285 Sum_probs=34.0
Q ss_pred CCCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEec
Q 013075 25 CPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVYP 67 (450)
Q Consensus 25 ~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 67 (450)
-.+.||++++|+|.++.++|+||||||.| ..+||.|.|+|.+
T Consensus 65 ~~~~pG~~~~~~f~~~~~~G~y~y~C~~H-~~~GM~G~i~V~~ 106 (106)
T 2gim_A 65 LLMSPGQSTSTTFPADAPAGEYTFYCEPH-RGAGMVGKITVAG 106 (106)
T ss_dssp CCCSTTCEEEEECCTTCCSEEEEEECTTT-GGGTCEEEEEECC
T ss_pred eeeCCCCEEEEEEecCCCCceEEEEeCCh-hhcCcEEEEEEcC
Confidence 35899999999996436899999999932 2359999999964
No 74
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=97.97 E-value=1.8e-05 Score=81.47 Aligned_cols=90 Identities=19% Similarity=0.161 Sum_probs=73.1
Q ss_pred ceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCC---------------c-c--
Q 013075 113 ALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTS---------------Y-T-- 174 (450)
Q Consensus 113 ~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~---------------~-v-- 174 (450)
..+|||+.. .....+.++.|++++|+|+|.+ ...+-||++||.|+|++.+|. + .
T Consensus 385 ~~~iNg~~~-------~~~~~~~~~~g~~~~w~l~N~~-~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (513)
T 2wsd_A 385 VLLLNNKRW-------HDPVTETPKVGTTEIWSIINPT-RGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPP 456 (513)
T ss_dssp EEEETTBCT-------TSCCCBCCBTTCEEEEEEEECS-SSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCC
T ss_pred eEeECCccC-------CCcccEecCCCCEEEEEEEcCC-CCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCC
Confidence 357999864 1234568999999999999987 457889999999999998761 1 1
Q ss_pred ---CceeecEEEecCCCeEEEEEEeCCCCceeEEEeeee
Q 013075 175 ---KPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 175 ---~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~ 210 (450)
+|...|++.|.+|+...|++.+++.||.|.++|+..
T Consensus 457 ~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil 495 (513)
T 2wsd_A 457 PPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHAL 495 (513)
T ss_dssp CGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCH
T ss_pred CccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCCh
Confidence 234789999999999999999966789999999964
No 75
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.97 E-value=2.4e-06 Score=88.17 Aligned_cols=56 Identities=21% Similarity=0.377 Sum_probs=42.3
Q ss_pred ccCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEEeCCceeeeeeccChh--hhhcceeEEEEEecCC
Q 013075 5 RHGVHQTRNPWADGPEYVTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSR--WLRATVYGALIVYPRM 69 (450)
Q Consensus 5 ~HG~~~~~~~~~DGv~~~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~--~~~~Gl~G~liV~~~~ 69 (450)
+||+.... .|+ ++.|.||++++|+|.+ +++|+||||||.. ..-.||+|.|+|++++
T Consensus 537 ~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta-~~pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 537 THGFTMGN----YGV----AMEIGPQMTSSVTFVA-ANPGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEETT----TTE----EEEECTTCEEEEEEEC-CSCEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred eeeEEecC----CCc----ceeeCCCCeEEEEEEC-CCCEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 67776543 232 3569999999999986 8999999999942 1114999999999764
No 76
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.77 E-value=2.7e-05 Score=64.18 Aligned_cols=40 Identities=13% Similarity=0.189 Sum_probs=33.5
Q ss_pred CCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEecCC
Q 013075 26 PIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVYPRM 69 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~~~ 69 (450)
-+.||++|+|+| +.+|+|||||-.| ..+||.|.|+|.++.
T Consensus 59 ~s~pGet~s~TF---~~pG~y~y~C~~H-~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 59 KGKINEEITVTL---SKPGVYMYQCAPH-VGMGMIGAIVVGEPA 98 (127)
T ss_dssp BCCTTCCCEEEC---CSCEEEEEECTTT-GGGTCEEEEEESSCT
T ss_pred ecCCCCEEEEEe---CCCeEEEEEeCCC-CcCCcEEEEEECcCC
Confidence 367999999999 5799999999854 336999999999865
No 77
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.76 E-value=3.7e-05 Score=62.99 Aligned_cols=39 Identities=15% Similarity=0.124 Sum_probs=32.3
Q ss_pred CCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEecCC
Q 013075 27 IQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVYPRM 69 (450)
Q Consensus 27 i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~~~ 69 (450)
+.||++++|+| +.+|+|||+|-.|. .+||.|.|+|.+++
T Consensus 58 ~~pg~t~s~TF---~~pG~y~y~C~~H~-~~GM~G~I~V~~~~ 96 (123)
T 3erx_A 58 SKINESYTLTV---TEPGLYGVKCTPHF-GMGMVGLVQVGDAP 96 (123)
T ss_dssp CCTTCCEEEEE---CSCEEEEEECGGGT-TTTCEEEEEESSSC
T ss_pred cCCCCEEEEEe---CCCeEEEEEeCCCC-cCCcEEEEEECCCC
Confidence 67999999999 57999999997442 35999999999743
No 78
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=97.76 E-value=1.9e-05 Score=66.35 Aligned_cols=39 Identities=18% Similarity=0.181 Sum_probs=33.7
Q ss_pred CCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEe
Q 013075 27 IQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVY 66 (450)
Q Consensus 27 i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 66 (450)
|.||+++++.|.+ +++|+||||||...-++||.|.|+|+
T Consensus 101 l~pGet~~v~f~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 101 ANGNETVEVTFTA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp BCTTCEEEEEEEC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred cCCCCEEEEEEEC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 8999999999986 78999999999764334999999984
No 79
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=97.71 E-value=2.8e-05 Score=61.02 Aligned_cols=37 Identities=22% Similarity=0.395 Sum_probs=30.9
Q ss_pred CCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEe
Q 013075 26 PIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVY 66 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 66 (450)
.+.||++++++| +++|+||||||.| ..+||.|.|+|+
T Consensus 62 ~~~pG~~~~~tf---~~~G~y~y~C~~H-~~~gM~G~i~V~ 98 (98)
T 2plt_A 62 LNAPGETYSVKL---TAAGEYGYYCEPH-QGAGMVGKIIVQ 98 (98)
T ss_dssp ECSTTCEEEEEC---CSCEEEEEECGGG-GGGTCEEEEEEC
T ss_pred ecCCCCEEEEEe---CCCeEEEEEcCCc-cccCCeEEEEEC
Confidence 489999999988 3799999999943 335999999984
No 80
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=97.68 E-value=2.8e-05 Score=61.03 Aligned_cols=37 Identities=24% Similarity=0.375 Sum_probs=31.0
Q ss_pred CCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEe
Q 013075 26 PIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVY 66 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 66 (450)
.+.||++++++| +++|+||||||.| ..+||.|.|+|+
T Consensus 62 ~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~gM~G~i~V~ 98 (98)
T 1pcs_A 62 LFAAGESFTSTF---TEPGTYTYYCEPH-RGAGMVGKVVVE 98 (98)
T ss_dssp ECSTTCEEEEEC---CSCEEEEEECGGG-TTTTCEEEEEEC
T ss_pred ccCCCCEEEEEc---CCCeEEEEEcCCc-cccCCeEEEEEC
Confidence 489999999988 5799999999943 235999999985
No 81
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=97.64 E-value=6.7e-05 Score=58.93 Aligned_cols=37 Identities=22% Similarity=0.354 Sum_probs=30.7
Q ss_pred CCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEe
Q 013075 26 PIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVY 66 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 66 (450)
.+.||++++++| +++|+|+|||+.| ..+||.|.|+|+
T Consensus 63 ~~~~G~~~~~~f---~~~G~y~~~C~~H-~~~gM~G~i~V~ 99 (99)
T 1byp_A 63 LNAPGEEYSVTL---TEKGTYKFYCAPH-AGAGMVGKVTVN 99 (99)
T ss_dssp BCSTTCEEEEEE---CSCEEEEEECGGG-TTTTCEEEEEEC
T ss_pred eeCCCCEEEEEe---CCCcEEEEEcCCc-cccCCEEEEEEC
Confidence 478999999988 4799999999943 235999999984
No 82
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.62 E-value=7.7e-05 Score=61.08 Aligned_cols=40 Identities=8% Similarity=-0.005 Sum_probs=32.6
Q ss_pred CCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEecCC
Q 013075 26 PIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVYPRM 69 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~~~ 69 (450)
-+.||++|+|+| +.+|+|||||-.| ..+||.|.|+|.++.
T Consensus 58 ~~~pg~t~s~TF---~~~G~y~Y~C~~H-~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 58 KGGFSKEVVFNA---EKEGLYVLKCAPH-YGMGMVVLVQVGKPV 97 (124)
T ss_dssp BCCTTCCEEEEC---CSSEEEEEECTTT-GGGTCEEEEEESSCT
T ss_pred ccCCCCEEEEEe---CCCeEEEEEcCCC-CcCCCEEEEEECCCC
Confidence 368999999999 5789999999643 235999999998853
No 83
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=97.60 E-value=4.9e-05 Score=58.63 Aligned_cols=37 Identities=22% Similarity=0.463 Sum_probs=30.8
Q ss_pred CCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEe
Q 013075 26 PIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVY 66 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 66 (450)
.+.||++++++| +++|+||||||.|. .+||.|.|+|+
T Consensus 55 ~~~~g~~~~~~f---~~~G~y~~~C~~H~-~~gM~g~i~V~ 91 (91)
T 1bxv_A 55 AFSPGETFEATF---SEPGTYTYYCEPHR-GAGMVGKIVVQ 91 (91)
T ss_dssp ECSTTCEEEEEC---CSCEEEEEECTTTG-GGTCEEEEEEC
T ss_pred eeCCCCEEEEEe---CCCEEEEEEeCCCc-cCCCEEEEEEC
Confidence 589999999988 57999999999442 24999999984
No 84
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=97.59 E-value=0.00022 Score=75.02 Aligned_cols=79 Identities=16% Similarity=0.155 Sum_probs=66.1
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCcc---------------------------CceeecEEE
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYT---------------------------KPFPTSVIM 183 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v---------------------------~P~~~~~i~ 183 (450)
...+.++.|++++|.|+|.+. ..+-|||+||.|+||+.+|... ++...|+|.
T Consensus 471 ~~~~~~~~g~~~~w~i~N~~~-~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~ 549 (612)
T 3gyr_A 471 GLGFTIGEGTHEQWTFLNLSP-ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQ 549 (612)
T ss_dssp CCCEEEETTCEEEEEEEECSS-SCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEE
T ss_pred CcceEeCCCCEEEEEEEcCCC-CCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEE
Confidence 357889999999999999984 5688999999999998766421 223469999
Q ss_pred ecCCCeEEEEEEeCCCCceeEEEeeee
Q 013075 184 IAPGQTTNVLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 184 l~~G~R~dv~v~~~~~~g~y~l~~~~~ 210 (450)
|.+|+...|.+++.+.||.|.++|+..
T Consensus 550 v~~~~~v~i~~rfadnpG~w~~HCHil 576 (612)
T 3gyr_A 550 VPGPQGLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp ECSSEEEEEEEECCSCCEEEEEEESSH
T ss_pred ECCCCEEEEEEEeCCCCcceEEcCCCh
Confidence 999999999999766789999999974
No 85
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=97.59 E-value=3.6e-05 Score=60.86 Aligned_cols=37 Identities=19% Similarity=0.213 Sum_probs=30.9
Q ss_pred CCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEe
Q 013075 26 PIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVY 66 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 66 (450)
.+.||++++++| +++|+|||||+.| ..+||.|.|+|+
T Consensus 66 ~~~pG~~~~~tf---~~~G~y~y~C~~H-~~~gM~G~i~V~ 102 (102)
T 1kdj_A 66 LSEDEPSFKAKV---STPGTYTFYCTPH-KSANMKGTLTVK 102 (102)
T ss_dssp BBTTBCEEEECC---CSCEEEEEECSTT-GGGTCEEEEEEC
T ss_pred ecCCCCEEEEEe---CCCeEEEEEeCCC-cccCCeEEEEEC
Confidence 489999999988 5799999999933 335999999985
No 86
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=97.55 E-value=8.5e-05 Score=58.34 Aligned_cols=37 Identities=14% Similarity=0.225 Sum_probs=30.6
Q ss_pred CCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEe
Q 013075 26 PIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVY 66 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 66 (450)
.+.||++++++| +++|+|||||+.| ..+||.|.|+|+
T Consensus 63 ~~~~G~~~~~tf---~~~G~y~~~C~~H-~~~gM~G~i~V~ 99 (99)
T 1plc_A 63 LNAKGETFEVAL---SNKGEYSFYCSPH-QGAGMVGKVTVN 99 (99)
T ss_dssp BCSTTCEEEEEC---CSCEEEEEECGGG-TTTTCEEEEEEC
T ss_pred ccCCCCEEEEEE---CCCceEEEEcCCC-cccCCEEEEEEC
Confidence 478999999988 4799999999943 235999999984
No 87
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=97.50 E-value=0.0002 Score=60.09 Aligned_cols=71 Identities=21% Similarity=0.300 Sum_probs=52.4
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCC-----------------CccC----ceeecEEEecCCCe
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDT-----------------SYTK----PFPTSVIMIAPGQT 189 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG-----------------~~v~----P~~~~~i~l~~G~R 189 (450)
+..++|++|++++|+|.|.+... .|.|.+...+. .++. ....+...|.|||+
T Consensus 34 p~~i~v~~G~~V~~~~~N~~~~~-------~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet 106 (139)
T 2aan_A 34 KTELTVSAGQTVTIRFKNNSAVQ-------QHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNET 106 (139)
T ss_dssp CSEEEECTTCEEEEEEECCCSSC-------CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCE
T ss_pred CCeEEECCCCEEEEEEEeCCCCC-------CeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCE
Confidence 46899999999999999988532 56666554321 2221 12345677999999
Q ss_pred EEEEEEeCCCCceeEEEeee
Q 013075 190 TNVLLTADQPPARYYMAAHA 209 (450)
Q Consensus 190 ~dv~v~~~~~~g~y~l~~~~ 209 (450)
+++.++++ .+|.|++.|..
T Consensus 107 ~~v~f~~~-~pG~y~f~C~~ 125 (139)
T 2aan_A 107 VEVTFTAP-AAGTYLYICTV 125 (139)
T ss_dssp EEEEEECC-SSEEEEEECCS
T ss_pred EEEEEECC-CCeEEEEEcCC
Confidence 99999998 57999999973
No 88
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=97.47 E-value=6.8e-05 Score=58.62 Aligned_cols=37 Identities=24% Similarity=0.380 Sum_probs=30.9
Q ss_pred CCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEe
Q 013075 26 PIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVY 66 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 66 (450)
.+.||++++++| +.+|+|+|||+.| ..+||.|.|+|+
T Consensus 61 ~~~~g~~~~~tf---~~~G~y~y~C~~H-~~~gM~G~i~V~ 97 (97)
T 1b3i_A 61 AIAPGSFYSVTL---GTPGTYSFYCTPH-RGAGMVGTITVE 97 (97)
T ss_dssp CCSCSCCEEEEC---CSCSEEEEECSST-TTTTCEEEEEEC
T ss_pred ecCCCCEEEEEe---CCCeEEEEEccCh-hhcCCEEEEEEC
Confidence 489999999988 5799999999943 235999999984
No 89
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=97.43 E-value=0.00017 Score=59.12 Aligned_cols=39 Identities=15% Similarity=0.297 Sum_probs=31.9
Q ss_pred CCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEecCC
Q 013075 27 IQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVYPRM 69 (450)
Q Consensus 27 i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~~~ 69 (450)
+.||++++|+| +.+|+|||+|..|. .+||.|.|+|.++.
T Consensus 58 ~~pG~t~~~tF---~~~G~y~y~C~~H~-~~gM~G~I~V~~~~ 96 (123)
T 1pmy_A 58 TTVGQEAVVKF---DKEGVYGFKCAPHY-MMGMVALVVVGDKR 96 (123)
T ss_dssp CCTTSCEEEEC---CSCEEEEEECSTTT-TTTCEEEEEESSCC
T ss_pred cCCCCEEEEEe---CCCeEEEEEeCCcc-ccCCEEEEEEcCCC
Confidence 67999999988 57999999997532 25999999998754
No 90
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=97.41 E-value=0.00011 Score=57.80 Aligned_cols=39 Identities=15% Similarity=0.158 Sum_probs=32.9
Q ss_pred CCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEe
Q 013075 26 PIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVY 66 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 66 (450)
.+.||++.+|.|.. +++|+|.|+|..|. ..||.|.|||+
T Consensus 62 ~~~pg~~~~~~~t~-~~~G~Y~y~C~~H~-~~gM~G~i~Ve 100 (100)
T 4hci_A 62 VVESGKEKNITVKP-KSAGTYELICRYHL-LKGMEGKVIVK 100 (100)
T ss_dssp EECTTCEEEEEECC-CSCEEEEEECTTTG-GGTCEEEEEEC
T ss_pred eecCCcceeEEEec-ccCceEEEECcccc-CCCCEEEEEEC
Confidence 37899999999975 89999999997542 24999999996
No 91
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=97.41 E-value=0.00021 Score=58.54 Aligned_cols=39 Identities=10% Similarity=0.125 Sum_probs=31.6
Q ss_pred CCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEecCC
Q 013075 27 IQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVYPRM 69 (450)
Q Consensus 27 i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~~~ 69 (450)
..||++++|+| +.+|+|||+|..|. .+||.|.|+|.++.
T Consensus 58 ~~pG~t~~~tF---~~~G~y~y~C~~H~-~~gM~G~I~V~~~~ 96 (123)
T 1paz_A 58 SKINENYVLTV---TQPGAYLVKCTPHY-AMGMIALIAVGDSP 96 (123)
T ss_dssp CCTTCCEEEEC---CSCEEEEEECTTTG-GGTCEEEEEESSSC
T ss_pred cCCCCEEEEEe---CCCEEEEEEeCCcc-cCCCEEEEEEcCCC
Confidence 56999999888 57999999997432 25999999998743
No 92
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.35 E-value=0.00017 Score=59.86 Aligned_cols=39 Identities=15% Similarity=0.257 Sum_probs=32.3
Q ss_pred cccCCCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEe
Q 013075 22 VTQCPIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVY 66 (450)
Q Consensus 22 ~tq~~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 66 (450)
.....+.||++++|+| +++|+|||||-.|. ||.|.|+|+
T Consensus 94 ~~s~~l~pG~t~~~tF---~~~G~y~y~C~~H~---gM~G~I~V~ 132 (132)
T 3c75_A 94 FRGEMMTKDQAYAITF---NEAGSYDYFCTPHP---FMRGKVIVE 132 (132)
T ss_dssp EECCCBCTTEEEEEEE---CSCEEEEEECSSCT---TCEEEEEEC
T ss_pred ccccccCCCCEEEEEc---CCCEEEEEEeCCCc---CCEEEEEEC
Confidence 3344589999999999 57899999997754 999999985
No 93
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=97.30 E-value=0.00017 Score=60.53 Aligned_cols=41 Identities=24% Similarity=0.255 Sum_probs=35.1
Q ss_pred CCCCCCeEEEEEEeCCceeeeeeccChhhhh-cceeEEEEEec
Q 013075 26 PIQPGRSYTYRFTIEDQEGTLWWHAHSRWLR-ATVYGALIVYP 67 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~ 67 (450)
.|.||++.++.|.+ +.+|+|||||+...-. .||.|.|+|.+
T Consensus 99 ~l~pG~~~~~~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 99 MLNAGESGSVTFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp CBCTTEEEEEEEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred eeCCCceeEEEEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 47999999999987 7899999999975444 49999999974
No 94
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=97.19 E-value=0.00022 Score=58.86 Aligned_cols=42 Identities=12% Similarity=0.152 Sum_probs=35.2
Q ss_pred CCCCCCeEEEEEEeC--CceeeeeeccChhhhhcceeEEEEEec
Q 013075 26 PIQPGRSYTYRFTIE--DQEGTLWWHAHSRWLRATVYGALIVYP 67 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 67 (450)
-|.||++.+..|.++ .++|+|||.|-..+.++||.|-|+|.+
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 379999999999863 289999999977665569999999964
No 95
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=97.16 E-value=0.00023 Score=61.25 Aligned_cols=42 Identities=12% Similarity=0.064 Sum_probs=35.0
Q ss_pred CCCCCCeEEEEEEeC-CceeeeeeccChhhhhcceeEEEEEec
Q 013075 26 PIQPGRSYTYRFTIE-DQEGTLWWHAHSRWLRATVYGALIVYP 67 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~-~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 67 (450)
-|.||++++..|.++ -++|+|||+|-..+.+.||.|-|+|.+
T Consensus 125 ~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 125 LIGGGEESSLTLDPAKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp CBCTTCEEEEEECGGGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred eeCCCCEEEEEEecCCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 379999999999762 179999999977666669999999964
No 96
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.14 E-value=0.00036 Score=54.61 Aligned_cols=37 Identities=11% Similarity=0.018 Sum_probs=31.0
Q ss_pred CCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEe
Q 013075 26 PIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVY 66 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 66 (450)
.+.||++++++| +++|+|||+|-.|. .+||.|.|+|+
T Consensus 62 ~~~~g~~~~~tf---~~~G~y~y~C~~H~-~~gM~G~I~V~ 98 (98)
T 1iuz_A 62 LNSKGETVVRKL---STPGVYGVYCEPHA-GAGMKMTITVQ 98 (98)
T ss_dssp ECSTTCEEEEEC---CSCEEEEEECTTTG-GGTCEEEEEEC
T ss_pred ccCCCCEEEEEc---CCCEEEEEEchhhc-cCCCEEEEEEC
Confidence 488999999988 57999999997643 24999999985
No 97
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=97.12 E-value=0.0019 Score=51.67 Aligned_cols=62 Identities=16% Similarity=0.226 Sum_probs=48.7
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~ 210 (450)
++.+++++|++++|++.|.... .+.|.+.+. | -...+.||+.+++.+.++ .+|.|+.+|...
T Consensus 37 p~~i~v~~G~~V~~~~~n~d~~-~H~~~i~~~--------~--------~~~~i~pG~~~~~~f~~~-~~G~y~~~C~~~ 98 (112)
T 1iby_A 37 PETLVVKKGDAVKVVVENKSPI-SEGFSIDAF--------G--------VQEVIKAGETKTISFTAD-KAGAFTIWCQLH 98 (112)
T ss_dssp SCEEEEETTCEEEEEEEECSSS-CEEEEEGGG--------T--------EEEEECTTCEEEEEEECC-SCEEEEEBCSSS
T ss_pred CCEEEEeCCCEEEEEEEECCCC-eEEEEEcCC--------C--------ceeEeCCCCEEEEEEECC-CCEEEEEECCCC
Confidence 4789999999999999999843 444444432 1 156799999999999988 579999999754
No 98
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=96.97 E-value=0.00091 Score=54.61 Aligned_cols=38 Identities=13% Similarity=0.077 Sum_probs=31.6
Q ss_pred CCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEecCC
Q 013075 26 PIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVYPRM 69 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~~~ 69 (450)
-+.||++++|+| +++|+|||+|-.|. .|.|.|+|.+.+
T Consensus 57 ~~~~g~t~~~tF---~~~G~y~y~C~~H~---~M~G~I~V~~~p 94 (122)
T 2ux6_A 57 KSKINENYKVTF---TAPGVYGVKCTPHP---FMVGVVQVGDAP 94 (122)
T ss_dssp BCCTTCCEEEEE---CSCEEEEEEETTEE---EEEEEEEESSSC
T ss_pred ecCCCCEEEEEe---CCCEEEEEEeCCCc---cCEEEEEEeCCC
Confidence 357899999999 57899999997754 399999998744
No 99
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.84 E-value=0.0011 Score=52.60 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=30.4
Q ss_pred CCCCCCeEEEEEEeCCceeeeeeccChhhhhcceeEEEEEe
Q 013075 26 PIQPGRSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIVY 66 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 66 (450)
.+.||++++++| +.+|+|+|+|-.|. ||.|.|+|+
T Consensus 72 ~l~~g~~~~~tf---~~~G~y~~~C~~H~---~M~G~I~V~ 106 (106)
T 1id2_A 72 MMTKDQAYAITF---NEAGSYDYFCTPHP---FMRGKVIVE 106 (106)
T ss_dssp CBCTTEEEEEEE---CSCEEEEEECSSCT---TCEEEEEEC
T ss_pred ccCCCCEEEEEe---CCCEEEEEEeCCCC---CCEEEEEEC
Confidence 488999999998 57899999997754 999999984
No 100
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=96.76 E-value=0.00099 Score=54.92 Aligned_cols=42 Identities=19% Similarity=0.138 Sum_probs=34.0
Q ss_pred CCCCCCeEEEEEEeC-Cceee-eeeccChhhhhcceeEEEEEec
Q 013075 26 PIQPGRSYTYRFTIE-DQEGT-LWWHAHSRWLRATVYGALIVYP 67 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~-~~~Gt-~wYH~H~~~~~~Gl~G~liV~~ 67 (450)
-|.||++++..|.++ -.+|+ |||.|-..+.++||.|-|+|.+
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~~ 129 (129)
T 2ccw_A 86 VIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWAMMKGTLKLGS 129 (129)
T ss_dssp CBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGGTSEEEEEECC
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCChhHcCEEEEEEeC
Confidence 379999999999863 15655 9999987666679999999963
No 101
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=96.74 E-value=0.001 Score=54.80 Aligned_cols=41 Identities=15% Similarity=0.182 Sum_probs=34.8
Q ss_pred CCCCCCeEEEEEEeCC--ceee-eeeccChhhhhcceeEEEEEec
Q 013075 26 PIQPGRSYTYRFTIED--QEGT-LWWHAHSRWLRATVYGALIVYP 67 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~~ 67 (450)
-|.||++++..|.+ . .+|+ |+|.|-..+.++||.|-|+|.+
T Consensus 85 ~l~pGes~~vtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~~ 128 (128)
T 2iaa_C 85 VIGGGETDSVTFDV-SKLKEGEDYAFFCSFPGHWSIMKGTIELGS 128 (128)
T ss_dssp CBCTTCEEEEEEES-SCCCTTCCEEEECCSTTCTTTSEEEEEECC
T ss_pred eeCCCCEEEEEEec-cccCCCceEEEEECCCChhHCCEEEEEEeC
Confidence 37999999999986 4 6885 9999987776779999999963
No 102
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=96.74 E-value=0.00089 Score=52.86 Aligned_cols=73 Identities=16% Similarity=0.332 Sum_probs=49.1
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAH 208 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~ 208 (450)
++.+++++|++++| +|.+ .....+++++..+.. .+|..-.....+.+.|.||+++++.+.+++.+|.|+++|+
T Consensus 18 p~~i~v~~Gd~V~~--~N~~-~~~H~v~~~~~~~~~--~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 18 PANVTVHPGDTVKW--VNNK-LPPHNILFDDKQVPG--ASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp SSEEEECTTEEEEE--EECS-SCCEEEEECTTSSGG--GCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred CCEEEEcCCCEEEE--EECC-CCCCeEEEeCCCCCc--ccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 47899999998865 6876 345677777654321 0110000112467889999999998877446899999997
No 103
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=96.53 E-value=0.0084 Score=46.81 Aligned_cols=61 Identities=15% Similarity=0.293 Sum_probs=47.3
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHA 209 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~ 209 (450)
+..++|++|++++|++.|.+. ..+.|.+++... ...+.||+..++.++++ .+|.|.+.|..
T Consensus 27 P~~i~v~~G~tV~~~~~n~d~-~~H~~~~~~~~~----------------~~~~~pg~~~~~~~t~~-~~G~Y~y~C~~ 87 (100)
T 4hci_A 27 PNVITIPINESTTLLLKNKGK-SEHTFTIKKLGI----------------DVVVESGKEKNITVKPK-SAGTYELICRY 87 (100)
T ss_dssp SSEEEECTTSCEEEEEEECSS-SCEEEEEGGGTE----------------EEEECTTCEEEEEECCC-SCEEEEEECTT
T ss_pred CCEEEECCCCEEEEEEEcCCC-ceEEEEEecCCc----------------ceeecCCcceeEEEecc-cCceEEEECcc
Confidence 458999999999999999874 345555554332 24578999999999988 57999999863
No 104
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=96.49 E-value=0.0017 Score=53.41 Aligned_cols=40 Identities=13% Similarity=0.159 Sum_probs=33.5
Q ss_pred CCCCCCeEEEEEEeCC--ceee-eeeccChhhhhcceeEEEEEe
Q 013075 26 PIQPGRSYTYRFTIED--QEGT-LWWHAHSRWLRATVYGALIVY 66 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~ 66 (450)
-|.||++++..|.+ . .+|+ |||.|-..+.++||.|-|+|.
T Consensus 86 ~l~pGet~svtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 86 VIGAGEKDSVTFDV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp CBCTTCEEEEEEEG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred eeCCCCEEEEEEec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 38999999999986 3 5776 999998766666999999984
No 105
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=96.26 E-value=0.014 Score=49.48 Aligned_cols=84 Identities=15% Similarity=0.215 Sum_probs=51.2
Q ss_pred ceeeCCcccCCCCCCCCceeeEEeeCCCEEEEEEEecCCCceEEEEEeCc--ceEEEEeCCCccCceeecEEEecCCC--
Q 013075 113 ALTINGQPGDLYRCSSKETVRFPVEAGETILLRIINSAMNQEHFFGVANH--KLTVVGVDTSYTKPFPTSVIMIAPGQ-- 188 (450)
Q Consensus 113 ~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh--~~~via~DG~~v~P~~~~~i~l~~G~-- 188 (450)
.+.++|... +.|+|++|++++|++.|.+....+.|.+... .+.....+ ..+.+.......|.|||
T Consensus 52 ~~~~~g~~~----------p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~i~PG~sg 120 (154)
T 2cal_A 52 SFEVHDKKN----------PTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVI-DPIVAGTGFSPVPKDGKFG 120 (154)
T ss_dssp CEEETTEES----------CEEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCC-CSEEEEBCCCCCCBTTBEE
T ss_pred cccccCCCC----------CEEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccc-cccccccccccccCCCCce
Confidence 567788764 8999999999999999975333444444321 11000000 00000000012679999
Q ss_pred eEEEEEEeCCCCceeEEEeee
Q 013075 189 TTNVLLTADQPPARYYMAAHA 209 (450)
Q Consensus 189 R~dv~v~~~~~~g~y~l~~~~ 209 (450)
..++.+++ .+|.||..|..
T Consensus 121 t~t~tft~--~pGtY~y~C~~ 139 (154)
T 2cal_A 121 YTDFTWHP--TAGTYYYVCQI 139 (154)
T ss_dssp EEEEEECC--CSEEEEEECCS
T ss_pred EEEEEEEE--CCceEEEECCC
Confidence 88888887 47999999973
No 106
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=96.17 E-value=0.013 Score=48.81 Aligned_cols=78 Identities=14% Similarity=0.259 Sum_probs=49.3
Q ss_pred eeeEEeeCCCEEEEEEEecCC-CceEEEEEeCc--ceEEE-------EeCCCccC-----ceeecEEEecCCCeEEEEEE
Q 013075 131 TVRFPVEAGETILLRIINSAM-NQEHFFGVANH--KLTVV-------GVDTSYTK-----PFPTSVIMIAPGQTTNVLLT 195 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh--~~~vi-------a~DG~~v~-----P~~~~~i~l~~G~R~dv~v~ 195 (450)
+..++|++|++++|+|.|.+. ...+.|.+... .+.-. ..|..++. ....++..|.+|+..++.++
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~ 111 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFR 111 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred CCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEEE
Confidence 468999999999999999421 22333333311 00000 01112221 12345678999999999999
Q ss_pred eCCCCceeEEEeee
Q 013075 196 ADQPPARYYMAAHA 209 (450)
Q Consensus 196 ~~~~~g~y~l~~~~ 209 (450)
++ .+|.|++.|..
T Consensus 112 ~~-~~G~y~f~C~~ 124 (140)
T 1qhq_A 112 TP-APGTYLYICTF 124 (140)
T ss_dssp CC-SSEEEEEECCS
T ss_pred eC-CCeeEEEEeCC
Confidence 98 47999999974
No 107
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.86 E-value=0.0092 Score=49.04 Aligned_cols=78 Identities=13% Similarity=0.187 Sum_probs=49.1
Q ss_pred eeeEEe-eCCCEEEEEEEecCCCc----eEEEEEeCcc-eEEE-------EeCCCccCcee----ecEEEecCCCeEEEE
Q 013075 131 TVRFPV-EAGETILLRIINSAMNQ----EHFFGVANHK-LTVV-------GVDTSYTKPFP----TSVIMIAPGQTTNVL 193 (450)
Q Consensus 131 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh~-~~vi-------a~DG~~v~P~~----~~~i~l~~G~R~dv~ 193 (450)
+..|+| ++|++++|.|.|.+... .+.|.|.... +.-+ +.+-.++.+-. ...-.|.|||+++|.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 2ccw_A 17 VKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVT 96 (129)
T ss_dssp CSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEE
Confidence 468999 99999999999999542 3445544321 0000 01112222111 123358999999999
Q ss_pred EEeC--CCCceeEEEee
Q 013075 194 LTAD--QPPARYYMAAH 208 (450)
Q Consensus 194 v~~~--~~~g~y~l~~~ 208 (450)
++++ ++.++|+..|.
T Consensus 97 f~~~~l~~G~~Y~f~C~ 113 (129)
T 2ccw_A 97 FDVSKIAAGENYAYFCS 113 (129)
T ss_dssp EEGGGSCTTCCEEEECC
T ss_pred EeccccCCCceEEEEeC
Confidence 9987 54456999886
No 108
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.72 E-value=0.016 Score=47.63 Aligned_cols=78 Identities=14% Similarity=0.146 Sum_probs=49.4
Q ss_pred eeeEEeeCC-CEEEEEEEecCCCc----eEEEEEeCcc-eEEEEeC-------CCccC---ce-eecEEEecCCCeEEEE
Q 013075 131 TVRFPVEAG-ETILLRIINSAMNQ----EHFFGVANHK-LTVVGVD-------TSYTK---PF-PTSVIMIAPGQTTNVL 193 (450)
Q Consensus 131 ~~~~~v~~G-~~~rlRliN~~~~~----~~~~~i~gh~-~~via~D-------G~~v~---P~-~~~~i~l~~G~R~dv~ 193 (450)
+..|+|++| ++++|.|.|.+... .+.|.|.... +.-++.| -.++. +. ....-.|.|||++++.
T Consensus 17 p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 1cuo_A 17 TRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVK 96 (129)
T ss_dssp CSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEE
T ss_pred cCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEE
Confidence 468999999 99999999998542 3444444321 0000000 12221 11 1123458999999999
Q ss_pred EEeC--CCCceeEEEee
Q 013075 194 LTAD--QPPARYYMAAH 208 (450)
Q Consensus 194 v~~~--~~~g~y~l~~~ 208 (450)
++++ ..+|.|+..+.
T Consensus 97 f~~~~~~~~G~Y~f~C~ 113 (129)
T 1cuo_A 97 FKVSALSKDEAYTYFCS 113 (129)
T ss_dssp EEGGGCCTTSCEEEECC
T ss_pred EeccccCCCceEEEEeC
Confidence 9987 34799999986
No 109
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=95.71 E-value=0.013 Score=48.14 Aligned_cols=78 Identities=14% Similarity=0.246 Sum_probs=49.0
Q ss_pred eeeEEe-eCCCEEEEEEEecCCCc----eEEEEEeCcc-eEEEE-------eCCCccCcee----ecEEEecCCCeEEEE
Q 013075 131 TVRFPV-EAGETILLRIINSAMNQ----EHFFGVANHK-LTVVG-------VDTSYTKPFP----TSVIMIAPGQTTNVL 193 (450)
Q Consensus 131 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh~-~~via-------~DG~~v~P~~----~~~i~l~~G~R~dv~ 193 (450)
+..|+| ++|++++|.|.|.+... .+.|.|.... +.-++ .|-.++.+-. ...-.|.|||++++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (128)
T 1nwp_A 17 TKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVT 96 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEE
Confidence 468999 99999999999999542 3555554321 11011 1222332211 122359999999999
Q ss_pred EEeC--CCCceeEEEee
Q 013075 194 LTAD--QPPARYYMAAH 208 (450)
Q Consensus 194 v~~~--~~~g~y~l~~~ 208 (450)
++++ ++.++|+..|.
T Consensus 97 f~~~~l~~G~~Y~f~C~ 113 (128)
T 1nwp_A 97 FDVSKLAAGEKYGFFCS 113 (128)
T ss_dssp EEGGGSCTTSCEEEECC
T ss_pred EeccccCCCceEEEEEC
Confidence 9986 43345999986
No 110
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=95.60 E-value=0.032 Score=45.66 Aligned_cols=78 Identities=17% Similarity=0.231 Sum_probs=48.8
Q ss_pred eeeEEe-eCCCEEEEEEEecCCCc----eEEEEEeCcc-eEEE-------EeCCCccCce----eecEEEecCCCeEEEE
Q 013075 131 TVRFPV-EAGETILLRIINSAMNQ----EHFFGVANHK-LTVV-------GVDTSYTKPF----PTSVIMIAPGQTTNVL 193 (450)
Q Consensus 131 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh~-~~vi-------a~DG~~v~P~----~~~~i~l~~G~R~dv~ 193 (450)
+..|+| ++|++++|.|.|.+... .+.|.|.... +.-+ +.|-.++.+- ....-.|.|||++++.
T Consensus 16 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vt 95 (128)
T 2iaa_C 16 TKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVT 95 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEE
Confidence 468999 99999999999999542 3444444211 1000 0112233211 1223358999999999
Q ss_pred EEeCC-CCc-eeEEEee
Q 013075 194 LTADQ-PPA-RYYMAAH 208 (450)
Q Consensus 194 v~~~~-~~g-~y~l~~~ 208 (450)
++++. .+| +|+..|.
T Consensus 96 f~~~~l~~G~~Y~f~C~ 112 (128)
T 2iaa_C 96 FDVSKLKEGEDYAFFCS 112 (128)
T ss_dssp EESSCCCTTCCEEEECC
T ss_pred EeccccCCCceEEEEEC
Confidence 99872 257 6999885
No 111
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.58 E-value=0.015 Score=49.89 Aligned_cols=79 Identities=20% Similarity=0.295 Sum_probs=49.6
Q ss_pred eeeEEe-eCCCEEEEEEEecCCCc----eEEEEEeCcc-eEEEEe------CCCccCc----eeecEEEecCCCeEEEEE
Q 013075 131 TVRFPV-EAGETILLRIINSAMNQ----EHFFGVANHK-LTVVGV------DTSYTKP----FPTSVIMIAPGQTTNVLL 194 (450)
Q Consensus 131 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh~-~~via~------DG~~v~P----~~~~~i~l~~G~R~dv~v 194 (450)
+..|+| ++|++++|.|.|.+... .+.|.|.... +.-++. +-.++.+ .......|.+|++++|.+
T Consensus 57 P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf 136 (167)
T 3ay2_A 57 TKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTL 136 (167)
T ss_dssp CSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEE
Confidence 468999 99999999999998542 2444443221 000000 1122321 112334689999999999
Q ss_pred EeCC-CCceeEEEeee
Q 013075 195 TADQ-PPARYYMAAHA 209 (450)
Q Consensus 195 ~~~~-~~g~y~l~~~~ 209 (450)
+++. .+|.|++.|..
T Consensus 137 ~~~~lkpG~Y~f~Ct~ 152 (167)
T 3ay2_A 137 DPAKLADGDYKFACTF 152 (167)
T ss_dssp CGGGGTTSCEEEECCS
T ss_pred ecCCCCCcEEEEEcCC
Confidence 9872 36999999863
No 112
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=95.48 E-value=0.017 Score=46.85 Aligned_cols=78 Identities=15% Similarity=0.257 Sum_probs=51.0
Q ss_pred eeeEEeeC-CCEEEEEEEecCCCc----eEEEEEeCc-ceEEEE-------eCCCccCc----eeecEEEecCCCeEEEE
Q 013075 131 TVRFPVEA-GETILLRIINSAMNQ----EHFFGVANH-KLTVVG-------VDTSYTKP----FPTSVIMIAPGQTTNVL 193 (450)
Q Consensus 131 ~~~~~v~~-G~~~rlRliN~~~~~----~~~~~i~gh-~~~via-------~DG~~v~P----~~~~~i~l~~G~R~dv~ 193 (450)
+..|.|++ |+++||.|.|.|... .+++.|... .+.-++ .|-.++.+ ....+..|+|||++++.
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vt 96 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVT 96 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEE
Confidence 46899986 999999999999652 344444311 111111 13345532 23345569999999999
Q ss_pred EEeCC--CCceeEEEee
Q 013075 194 LTADQ--PPARYYMAAH 208 (450)
Q Consensus 194 v~~~~--~~g~y~l~~~ 208 (450)
++++. .+|.|...|.
T Consensus 97 f~~~~l~~~G~y~f~C~ 113 (125)
T 3fsa_A 97 FDVSKLKEGEQYMFFCA 113 (125)
T ss_dssp EEGGGC---CCEEEECS
T ss_pred EeCcCcCCCccEEEEcC
Confidence 99983 5799999886
No 113
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=95.25 E-value=0.0037 Score=49.36 Aligned_cols=73 Identities=18% Similarity=0.361 Sum_probs=43.5
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAH 208 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~ 208 (450)
+..+++++|++++|+ |.+. ..+.|.+++..+.. .+|..-.....+.+.|.||+++++.+.++..+|.|++.|.
T Consensus 19 P~~i~v~~Gd~V~~~--n~~~-~~H~~~~~~~~~~~--~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~ 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEFL--NNKV-PPHNVVFDAALNPA--KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE 91 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSS-SCCCBEECSSSSTT--CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT
T ss_pred CCEEEECCCCEEEEE--ECCC-CCceEEEeCCCCcc--cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC
Confidence 468999999998775 7763 23333333321100 0010000011245779999999997766346899999987
No 114
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.14 E-value=0.014 Score=59.42 Aligned_cols=42 Identities=24% Similarity=0.473 Sum_probs=34.8
Q ss_pred CCCCCCeEEEEEEeCCceeeeeeccChhh--hhcceeEEEEEecC
Q 013075 26 PIQPGRSYTYRFTIEDQEGTLWWHAHSRW--LRATVYGALIVYPR 68 (450)
Q Consensus 26 ~i~pg~~~~Y~f~~~~~~Gt~wYH~H~~~--~~~Gl~G~liV~~~ 68 (450)
-+.||++.++.|.+ +++|+|||+|.... .-.+|.|-|+|+++
T Consensus 595 DaiPGrtnsvtFta-dkPGvY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 595 EISPQQTSSITFVA-DKPGLHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EECTTCEEEEEEEC-CSCEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred eeCCCCeEEEEEEc-CCCEEEEEECCCcCCCCcccceEEEEEecC
Confidence 48899999999986 89999999998532 22489999999864
No 115
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=94.94 E-value=0.19 Score=51.87 Aligned_cols=64 Identities=22% Similarity=0.373 Sum_probs=50.9
Q ss_pred eeeEEeeCCCEEEEEEEecCC--CceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEee
Q 013075 131 TVRFPVEAGETILLRIINSAM--NQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAH 208 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~--~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~ 208 (450)
++.++|++|++++|++.|... .-.+.|.+.++.+. ..+.||+..++.++++ .+|.||.+|+
T Consensus 512 pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------~~i~PG~t~t~~Fta~-~pGtY~yhC~ 574 (595)
T 1fwx_A 512 IESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------MEIGPQMTSSVTFVAA-NPGVYWYYCQ 574 (595)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECC-SCEEEEEECC
T ss_pred CCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------eeeCCCCeEEEEEECC-CCEEEEEECC
Confidence 579999999999999999753 22566666665321 5789999999999998 5799999998
Q ss_pred eec
Q 013075 209 AYN 211 (450)
Q Consensus 209 ~~~ 211 (450)
-++
T Consensus 575 e~C 577 (595)
T 1fwx_A 575 WFC 577 (595)
T ss_dssp SCC
T ss_pred CCC
Confidence 544
No 116
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=94.35 E-value=0.081 Score=40.72 Aligned_cols=68 Identities=18% Similarity=0.230 Sum_probs=43.7
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAH 208 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~ 208 (450)
+..+++++|++++| .|.+. ..+.+.+.+..+ .+|..-.....+.+.+.+|+++.+- ++ .+|.|++.|.
T Consensus 17 P~~i~v~~G~~V~~--~n~~~-~~H~~~~~~~~~----p~~~~~~~~~~~~~~~~pG~~~~~t--f~-~~G~y~y~C~ 84 (98)
T 2plt_A 17 PKTLTIKSGETVNF--VNNAG-FPHNIVFDEDAI----PSGVNADAISRDDYLNAPGETYSVK--LT-AAGEYGYYCE 84 (98)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCEEEEECGGGS----CTTCCHHHHCEEEEECSTTCEEEEE--CC-SCEEEEEECG
T ss_pred CCEEEECCCCEEEE--EECCC-CceEEEEeCCCC----CCccccccccccceecCCCCEEEEE--eC-CCeEEEEEcC
Confidence 46899999998877 68763 345555554321 0111000012356889999998884 45 5799999997
No 117
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.23 E-value=0.033 Score=45.16 Aligned_cols=37 Identities=14% Similarity=0.230 Sum_probs=29.3
Q ss_pred CCCCCeEEEEEEeC--CceeeeeeccChhhhhcceeEEEEEe
Q 013075 27 IQPGRSYTYRFTIE--DQEGTLWWHAHSRWLRATVYGALIVY 66 (450)
Q Consensus 27 i~pg~~~~Y~f~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~ 66 (450)
|.||++++..|+.+ .++|+|.|-|- +-+ ||.|-|+|.
T Consensus 87 l~pGes~~vtf~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 87 IGSGEKDSVTFDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp BCTTCEEEEEEEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred eCCCcEEEEEEeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 79999999999873 27899999998 333 999999984
No 118
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=94.13 E-value=0.14 Score=38.61 Aligned_cols=60 Identities=18% Similarity=0.340 Sum_probs=41.5
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAH 208 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~ 208 (450)
+..+.+++|++++|+ |.+. ..+.+.+.+. .+...+.+.+.+|+.+.+.+ + .+|.|++.|.
T Consensus 18 P~~i~v~~Gd~V~~~--n~~~-~~H~v~~~~~------------~~~~~~~~~~~~g~~~~~~f--~-~~G~y~~~C~ 77 (91)
T 1bxv_A 18 PSTIEIQAGDTVQWV--NNKL-APHNVVVEGQ------------PELSHKDLAFSPGETFEATF--S-EPGTYTYYCE 77 (91)
T ss_dssp SSEEEECTTCEEEEE--ECSS-CCEEEEETTC------------GGGCEEEEECSTTCEEEEEC--C-SCEEEEEECT
T ss_pred CCEEEECCCCEEEEE--ECCC-CCcEEEEeCC------------CccCcccceeCCCCEEEEEe--C-CCEEEEEEeC
Confidence 468899999998875 6542 3444554441 12224567899999887754 5 5799999997
No 119
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=94.03 E-value=0.039 Score=42.93 Aligned_cols=65 Identities=11% Similarity=0.118 Sum_probs=42.2
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCc-------cCc-eeecEEEecCCCeEEEEEEeCCCCce
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSY-------TKP-FPTSVIMIAPGQTTNVLLTADQPPAR 202 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~-------v~P-~~~~~i~l~~G~R~dv~v~~~~~~g~ 202 (450)
+..++|++|++++|+ |.+.. .|.+.+...++.. ..| ...+.+.+.+|+.+++- ++ .+|.
T Consensus 16 P~~i~v~~G~tV~~~--n~~~~--------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~t--f~-~~G~ 82 (102)
T 1kdj_A 16 PDSITVSAGEAVEFT--LVGET--------GHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAK--VS-TPGT 82 (102)
T ss_dssp SSEEEECTTCCEEEE--ECSSS--------CBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEEC--CC-SCEE
T ss_pred CCEEEECCCCEEEEE--ECCCC--------CeEEEEeCcccccccccchhhcccccccceecCCCCEEEEE--eC-CCeE
Confidence 468999999998875 77632 3555543333321 001 11245778999998874 45 5799
Q ss_pred eEEEee
Q 013075 203 YYMAAH 208 (450)
Q Consensus 203 y~l~~~ 208 (450)
|++.|.
T Consensus 83 y~y~C~ 88 (102)
T 1kdj_A 83 YTFYCT 88 (102)
T ss_dssp EEEECS
T ss_pred EEEEeC
Confidence 999987
No 120
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=93.94 E-value=0.11 Score=39.94 Aligned_cols=64 Identities=20% Similarity=0.323 Sum_probs=41.8
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccC--ceeecEEEecCCCeEEEEEEeCCCCceeEEEee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTK--PFPTSVIMIAPGQTTNVLLTADQPPARYYMAAH 208 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~--P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~ 208 (450)
+..+++++|++++|+ |.+. . .|.+.+.+.+. +.. ....+.+.+.+|+.+++-+ + .+|.|++.|.
T Consensus 18 P~~i~v~~G~~V~~~--n~~~-~-------~H~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~tf--~-~~G~y~y~C~ 83 (97)
T 1b3i_A 18 PKALSISAGDTVEFV--MNKV-G-------PHNVIFDKVPA-GESAPALSNTKLAIAPGSFYSVTL--G-TPGTYSFYCT 83 (97)
T ss_dssp SSEEEECTTCEEEEE--ECSS-C-------CCCBEEEECCT-TSCHHHHCBCCCCCSCSCCEEEEC--C-SCSEEEEECS
T ss_pred CCEEEECCCCEEEEE--ECCC-C-------CeEEEEeCCCC-ccccccccccceecCCCCEEEEEe--C-CCeEEEEEcc
Confidence 468999999988765 7652 1 35555543321 111 0113567789999998854 5 5799999987
No 121
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=93.76 E-value=0.067 Score=41.22 Aligned_cols=67 Identities=13% Similarity=0.216 Sum_probs=42.4
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAH 208 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~ 208 (450)
+..+++++|++++|+ |.+. ..+.+.+.+...- +++ -.....+.+.+.+|+.+.+- ++ .+|.|++.|.
T Consensus 18 P~~i~v~~G~~V~~~--n~~~-~~H~~~~~~~~~p--g~~---~~~~~~~~~~~~pG~~~~~t--f~-~~G~y~~~C~ 84 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWV--NNKL-SPHNIVFDADGVP--ADT---AAKLSHKGLLFAAGESFTST--FT-EPGTYTYYCE 84 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSS-CCEEEEECCSSSC--HHH---HHHHCEEEEECSTTCEEEEE--CC-SCEEEEEECG
T ss_pred CCEEEECCCCEEEEE--ECCC-CCcEEEEeCCCCC--ccc---cccccccccccCCCCEEEEE--cC-CCeEEEEEcC
Confidence 468999999998876 6652 3455555432110 000 00011357889999998874 45 5799999997
No 122
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=92.45 E-value=0.31 Score=37.44 Aligned_cols=69 Identities=19% Similarity=0.173 Sum_probs=41.3
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHA 209 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~ 209 (450)
+..++|++|++++|+ |.+. ..+.+.+..... -+|........+.+.+.+|+.+++-+ + .+|.|++.|..
T Consensus 17 P~~i~v~~GdtV~~~--n~~~-~~H~v~~~~~~~----p~g~~~~~~~~~~~~~~~g~~~~~tf--~-~~G~y~y~C~~ 85 (98)
T 1iuz_A 17 PSKISVAAGEAIEFV--NNAG-FPHNIVFDEDAV----PAGVDADAISYDDYLNSKGETVVRKL--S-TPGVYGVYCEP 85 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSS-CCEEEEECTTSS----CTTCCHHHHCEEEEECSTTCEEEEEC--C-SCEEEEEECTT
T ss_pred CCEEEECCCCEEEEE--ECCC-CCEEEEEeCCCC----ccccccccccccccccCCCCEEEEEc--C-CCEEEEEEchh
Confidence 468999999998775 6653 344444332100 01110001112357899999888754 5 57999999863
No 123
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=92.40 E-value=0.2 Score=39.13 Aligned_cols=63 Identities=17% Similarity=0.182 Sum_probs=40.1
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHA 209 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~ 209 (450)
++.++|++|++++| .|... ..+.+.+++- .||. ... +.-.|.+|+++++-+ + .+|.|+++|..
T Consensus 32 P~~i~v~~Gd~V~~--~N~d~-~~H~v~~~~~------~~g~--~~~--~~~~~~pG~~~~~tf--~-~~G~y~y~C~~ 94 (105)
T 2ov0_A 32 TPELHVKVGDTVTW--INREA-MPHNVHFVAG------VLGE--AAL--KGPMMKKEQAYSLTF--T-EAGTYDYHCTP 94 (105)
T ss_dssp SSEEEECTTCEEEE--EECSS-SCBCCEECTT------TSSS--SCE--ECCCBCTTEEEEEEE--C-SCEEEEEECSS
T ss_pred CCEEEECCCCEEEE--EECCC-CCEEEEEcCC------CCCc--ccc--cccccCCCCEEEEEe--C-CCEEEEEEeCC
Confidence 47899999999877 48764 3344444321 1332 111 122478999887655 5 57999999864
No 124
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.25 E-value=1.5 Score=44.79 Aligned_cols=65 Identities=26% Similarity=0.428 Sum_probs=51.9
Q ss_pred eeeEEeeCCCEEEEEEEecCC--CceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEee
Q 013075 131 TVRFPVEAGETILLRIINSAM--NQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAH 208 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~--~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~ 208 (450)
+..|+|+.|+++||.+-|... .-.+.|.|.+..+. +.+.||+...+.++++ .||.|+..|.
T Consensus 557 P~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------~DaiPGrtnsvtFtad-kPGvY~y~CS 619 (638)
T 3sbq_A 557 VQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------MEISPQQTSSITFVAD-KPGLHWYYCS 619 (638)
T ss_dssp CCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECC-SCEEEEEECC
T ss_pred CCEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------eeeCCCCeEEEEEEcC-CCEEEEEECC
Confidence 468999999999999999753 45677777776533 2688999999999999 5799999998
Q ss_pred eecc
Q 013075 209 AYNT 212 (450)
Q Consensus 209 ~~~~ 212 (450)
-++.
T Consensus 620 E~CG 623 (638)
T 3sbq_A 620 WFCH 623 (638)
T ss_dssp SCCS
T ss_pred CcCC
Confidence 6543
No 125
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=90.48 E-value=0.21 Score=40.46 Aligned_cols=75 Identities=9% Similarity=0.119 Sum_probs=46.9
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~ 210 (450)
+..++|++|++++|.+-|. +|.++..+ + ..|.....+.+.||+.+++-+ + .+|.|+..|..-
T Consensus 20 P~~i~V~~GdtV~f~~~~~-----------~H~v~~~~--~--~~P~g~~~f~~~pg~t~s~TF--~-~pG~y~y~C~~H 81 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK-----------SHNVEAIK--E--ILPEGVESFKSKINESYTLTV--T-EPGLYGVKCTPH 81 (123)
T ss_dssp SSEEEECTTEEEEEEESST-----------TCCCEECT--T--SSCTTCCCCBCCTTCCEEEEE--C-SCEEEEEECGGG
T ss_pred CCEEEECCCCEEEEEECCC-----------CceEEEcC--C--cCCCCccceecCCCCEEEEEe--C-CCeEEEEEeCCC
Confidence 4689999999999887763 35554421 1 112222334467899877766 4 579999999732
Q ss_pred ccccccCCCccEEEEEEecc
Q 013075 211 NTANAAFDNTTTTAILEYKS 230 (450)
Q Consensus 211 ~~~~~~~~~~~~~ail~y~~ 230 (450)
.. ....+.|....
T Consensus 82 ~~-------~GM~G~I~V~~ 94 (123)
T 3erx_A 82 FG-------MGMVGLVQVGD 94 (123)
T ss_dssp TT-------TTCEEEEEESS
T ss_pred Cc-------CCcEEEEEECC
Confidence 21 12466666654
No 126
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=89.94 E-value=0.23 Score=38.15 Aligned_cols=68 Identities=19% Similarity=0.254 Sum_probs=40.9
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccC--ceeecEEEecCCCeEEEEEEeCCCCceeEEEee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTK--PFPTSVIMIAPGQTTNVLLTADQPPARYYMAAH 208 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~--P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~ 208 (450)
+..++|++|++++| .|.+. ..+.+.+....+ .+|.... ....+.+.+.+|+.+++-+ + .+|.|++.|.
T Consensus 16 P~~i~v~~G~tV~~--~n~~~-~~H~v~~~~~~~----p~~~~~~~~~~~~~~~~~~~G~~~~~tf--~-~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAG-FPHNIVFDEDSI----PSGVDASKISMSEEDLLNAKGETFEVAL--S-NKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCBCCEECTTSS----CTTCCHHHHCCCTTCCBCSTTCEEEEEC--C-SCEEEEEECG
T ss_pred CCEEEECCCCEEEE--EECCC-CceEEEEeCCCC----cccccccccccccCccccCCCCEEEEEE--C-CCceEEEEcC
Confidence 46899999998877 67763 233344333211 0121000 0112346789999988754 5 5799999987
No 127
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=89.67 E-value=1.5 Score=35.89 Aligned_cols=62 Identities=23% Similarity=0.394 Sum_probs=46.7
Q ss_pred eeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeec
Q 013075 132 VRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYN 211 (450)
Q Consensus 132 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~ 211 (450)
..+.++.|+++||++-|.. -.+.|.+.+..+ .+.+.||+.-.+.++++ .+|.|...|.-++
T Consensus 60 ~~l~Vp~G~~V~~~vts~D--V~Hsf~ip~~~~----------------k~d~~PG~~~~~~~~~~-~~G~y~~~C~e~C 120 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD--VIHGFHVEGTNI----------------NVEVLPGEVSTVRYTFK-RPGEYRIICNQYC 120 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS--SCEEEEETTSSC----------------EEEECBTBCEEEEEECC-SCEEEEEECCSCC
T ss_pred CEEEEcCCCEEEEEEEeCC--ccceEEecCCCc----------------eeEeCCCCcEEEEEEcC-CCEEEEEECcccC
Confidence 4789999999999988764 455666654432 24567898888999998 5799999997554
Q ss_pred c
Q 013075 212 T 212 (450)
Q Consensus 212 ~ 212 (450)
.
T Consensus 121 G 121 (135)
T 2cua_A 121 G 121 (135)
T ss_dssp S
T ss_pred C
Confidence 3
No 128
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=89.59 E-value=0.24 Score=38.01 Aligned_cols=68 Identities=19% Similarity=0.232 Sum_probs=40.7
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccC--ceeecEEEecCCCeEEEEEEeCCCCceeEEEee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTK--PFPTSVIMIAPGQTTNVLLTADQPPARYYMAAH 208 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~--P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~ 208 (450)
+..++|++|++++| .|.+. ..+.+.+.+..+ .+|.... ....+.+.|.+|+.+++-+ + .+|.|++.|.
T Consensus 16 P~~i~v~~G~tV~~--~n~~~-~~H~~~~~~~~~----p~g~~~~~~~~~~~~~~~~~G~~~~~~f--~-~~G~y~~~C~ 85 (99)
T 1byp_A 16 PSDLSIASGEKITF--KNNAG-FPHNDLFDKKEV----PAGVDVTKISMPEEDLLNAPGEEYSVTL--T-EKGTYKFYCA 85 (99)
T ss_dssp SSEEEECTTEEEEE--EECSS-CCBCCEECTTSS----CTTCCHHHHSCCTTCCBCSTTCEEEEEE--C-SCEEEEEECG
T ss_pred CCEEEECCCCEEEE--EECCC-CcceEEEeCCCC----ccccccccccccccceeeCCCCEEEEEe--C-CCcEEEEEcC
Confidence 46899999998776 67763 233333333211 0221100 0112446789999988854 4 5799999997
No 129
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=87.57 E-value=0.88 Score=35.48 Aligned_cols=63 Identities=16% Similarity=0.194 Sum_probs=38.7
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHA 209 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~ 209 (450)
+..+.|++|++++|+ |.+. ..+.+.+..... |. . ..+.-.|.+|+.+++-+ + .+|.|.+.|..
T Consensus 33 P~~i~V~~G~tV~~~--N~d~-~~H~v~~~~~~~------~~--~--~~~s~~l~~g~~~~~tf--~-~~G~y~~~C~~ 95 (106)
T 1id2_A 33 TPEVTIKAGETVYWV--NGEV-MPHNVAFKKGIV------GE--D--AFRGEMMTKDQAYAITF--N-EAGSYDYFCTP 95 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSS-SCBCCEECTTTS------SS--S--CEECCCBCTTEEEEEEE--C-SCEEEEEECSS
T ss_pred CCEEEECCCCEEEEE--ECCC-CcEEEEEeCCCC------Cc--c--cccccccCCCCEEEEEe--C-CCEEEEEEeCC
Confidence 468999999998776 7763 223333322110 10 1 12223578999888755 5 57999999864
No 130
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=86.94 E-value=2.5 Score=35.96 Aligned_cols=62 Identities=23% Similarity=0.422 Sum_probs=48.1
Q ss_pred eeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeec
Q 013075 132 VRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYN 211 (450)
Q Consensus 132 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~ 211 (450)
.++.++.|+.+||++-|. .-.+.|.+.+..++ +.+.||+.-.+.++++ .+|.|+..|.-++
T Consensus 93 n~l~VP~G~~Vr~~vTS~--DViHsf~IP~lgik----------------~da~PG~~n~~~~~~~-kpG~y~g~Cse~C 153 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP--DVIHGFHVEGTNIN----------------VEVLPGEVSTVRYTFK-RPGEYRIICNQYC 153 (168)
T ss_dssp SSEEEETTSEEEEEEECS--SSCEEEEETTSSCE----------------EEECTTBCEEEEEECC-SCEEEEEECCSCC
T ss_pred CEEEEeCCCeEEEEEecC--CceEEEEECCCCeE----------------EEecCCceeEEEEEeC-CCEEEEEECCcCC
Confidence 468899999999999885 46777777765433 3466898888999998 4799999998554
Q ss_pred c
Q 013075 212 T 212 (450)
Q Consensus 212 ~ 212 (450)
.
T Consensus 154 G 154 (168)
T 3s8f_B 154 G 154 (168)
T ss_dssp S
T ss_pred C
Confidence 4
No 131
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=86.38 E-value=0.34 Score=39.42 Aligned_cols=76 Identities=11% Similarity=0.122 Sum_probs=45.9
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~ 210 (450)
+..++|++|++++|.+-|. +|.+... ++. -|.....+.+.||+.+++-+ + .+|.|+..|..-
T Consensus 22 P~~i~V~~GDtVtf~n~~~-----------~H~v~~~--~~~--~P~g~~~f~s~pGet~s~TF--~-~pG~y~y~C~~H 83 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK-----------GHNSALM--KGG--APEGAETWKGKINEEITVTL--S-KPGVYMYQCAPH 83 (127)
T ss_dssp SSEEEECTTCEEEEECSSS-----------SCCCEEC--TTC--SCTTCCCCBCCTTCCCEEEC--C-SCEEEEEECTTT
T ss_pred CCEEEECCCCEEEEEECCC-----------CceEEEc--cCc--CCCCccceecCCCCEEEEEe--C-CCeEEEEEeCCC
Confidence 4689999999988876552 3555442 221 12112234457899877665 4 579999999731
Q ss_pred ccccccCCCccEEEEEEeccC
Q 013075 211 NTANAAFDNTTTTAILEYKSA 231 (450)
Q Consensus 211 ~~~~~~~~~~~~~ail~y~~~ 231 (450)
. .....+.|.....
T Consensus 84 ~-------~~GM~G~I~V~~~ 97 (127)
T 3tu6_A 84 V-------GMGMIGAIVVGEP 97 (127)
T ss_dssp G-------GGTCEEEEEESSC
T ss_pred C-------cCCcEEEEEECcC
Confidence 1 1224666666543
No 132
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=85.99 E-value=1.1 Score=36.49 Aligned_cols=63 Identities=16% Similarity=0.169 Sum_probs=39.0
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHA 209 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~ 209 (450)
+..++|++|++++|+ |... ..+.+.+.... +|. . ..+.-.|.+|+.+++-+ + .+|.|++.|..
T Consensus 59 P~~i~V~~GdtV~~~--N~d~-~~H~v~~~~~~------~g~--~--~~~s~~l~pG~t~~~tF--~-~~G~y~y~C~~ 121 (132)
T 3c75_A 59 TPEVTIKAGETVYWV--NGEV-MPHNVAFKKGI------VGE--D--AFRGEMMTKDQAYAITF--N-EAGSYDYFCTP 121 (132)
T ss_dssp SSEEEECTTCEEEEE--ECSS-SCBCCEECTTT------SSS--S--CEECCCBCTTEEEEEEE--C-SCEEEEEECSS
T ss_pred CCEEEECCCCEEEEE--ECCC-CceEEEEeCCC------CCc--c--cccccccCCCCEEEEEc--C-CCEEEEEEeCC
Confidence 468999999998875 7763 22333332211 111 1 12233578999988765 4 57999999863
No 133
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=85.64 E-value=0.62 Score=38.26 Aligned_cols=40 Identities=20% Similarity=0.391 Sum_probs=30.6
Q ss_pred CCCCCeEEEEEEeCCceeeeeeccChh--hhhcceeEEEEEec
Q 013075 27 IQPGRSYTYRFTIEDQEGTLWWHAHSR--WLRATVYGALIVYP 67 (450)
Q Consensus 27 i~pg~~~~Y~f~~~~~~Gt~wYH~H~~--~~~~Gl~G~liV~~ 67 (450)
+.||+.-++.|.. +++|+|+|+|... ..-++|.|-++|.+
T Consensus 94 ~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H~~M~g~v~V~~ 135 (135)
T 2cua_A 94 VLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQNMFGTIVVKE 135 (135)
T ss_dssp ECBTBCEEEEEEC-CSCEEEEEECCSCCSTTSTTCEEEEEEEC
T ss_pred eCCCCcEEEEEEc-CCCEEEEEECcccCCCCcCCCEEEEEEEC
Confidence 6789888888876 8999999999531 11258999998863
No 134
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=85.29 E-value=8.3 Score=30.72 Aligned_cols=73 Identities=15% Similarity=0.161 Sum_probs=51.9
Q ss_pred CCCEE--EEEEEecCCCceEEEEEe-Ccc--eEEEEeCCCccC--------ceeecEEEecCCCeEEEEEEeCC--CCce
Q 013075 138 AGETI--LLRIINSAMNQEHFFGVA-NHK--LTVVGVDTSYTK--------PFPTSVIMIAPGQTTNVLLTADQ--PPAR 202 (450)
Q Consensus 138 ~G~~~--rlRliN~~~~~~~~~~i~-gh~--~~via~DG~~v~--------P~~~~~i~l~~G~R~dv~v~~~~--~~g~ 202 (450)
+|+.+ .|.+.|-+ .....|.+. |+. +.|...+|..|- ++......|.|||...+-+..++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s-~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQS-ERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECS-SSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCC-CCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 45555 47778888 455566665 565 444455577661 34668999999999999999985 4799
Q ss_pred eEEEeeeec
Q 013075 203 YYMAAHAYN 211 (450)
Q Consensus 203 y~l~~~~~~ 211 (450)
|.+.+....
T Consensus 95 Ytl~a~l~~ 103 (120)
T 3isy_A 95 YEVKVTFKG 103 (120)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEEEe
Confidence 999987643
No 135
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=84.78 E-value=0.75 Score=37.07 Aligned_cols=60 Identities=10% Similarity=0.196 Sum_probs=36.7
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAH 208 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~ 208 (450)
+..++|++|++++|..-+. +|.+.+.+ + ..|.....+.+.+|+.+++- ++ .+|.|++.|.
T Consensus 20 P~~i~V~~GdtV~f~~~~~-----------~H~v~~~~--~--~~p~~~~~~~~~pG~t~~~t--F~-~~G~y~y~C~ 79 (123)
T 1paz_A 20 PAYIKANPGDTVTFIPVDK-----------GHNVESIK--D--MIPEGAEKFKSKINENYVLT--VT-QPGAYLVKCT 79 (123)
T ss_dssp SSEEEECTTCEEEEEESSS-----------SCCCEECT--T--CSCTTCCCCBCCTTCCEEEE--CC-SCEEEEEECT
T ss_pred CCEEEECCCCEEEEEECCC-----------CeEEEEec--c--cCCCCccceecCCCCEEEEE--eC-CCEEEEEEeC
Confidence 4689999999987754432 36655421 0 01111112345689987655 45 5799999986
No 136
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=83.09 E-value=1.1 Score=35.90 Aligned_cols=73 Identities=11% Similarity=0.191 Sum_probs=43.7
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAY 210 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~ 210 (450)
+..++|++|++++|+ |... +|.+.+.+ | .+ |-....+.+.+|+.+++-+ + .+|.|++.|..-
T Consensus 20 P~~i~V~~GdtV~f~--n~d~---------~H~v~~~~--~-~~-p~~~~~~~~~~g~t~~~tF--~-~~G~y~y~C~~H 81 (122)
T 2ux6_A 20 PASLKVAPGDTVTFI--PTDK---------GHNVETIK--G-MI-PDGAEAFKSKINENYKVTF--T-APGVYGVKCTPH 81 (122)
T ss_dssp SSEEEECTTEEEEEE--ESSS---------SCCCEECT--T-CS-CTTCCCCBCCTTCCEEEEE--C-SCEEEEEEETTE
T ss_pred CCEEEECCCCEEEEE--ECCC---------CcEEEEcc--c-cc-CCCcceeecCCCCEEEEEe--C-CCEEEEEEeCCC
Confidence 468999999998876 4432 35554432 1 11 1111233457899877655 5 579999998631
Q ss_pred ccccccCCCccEEEEEEecc
Q 013075 211 NTANAAFDNTTTTAILEYKS 230 (450)
Q Consensus 211 ~~~~~~~~~~~~~ail~y~~ 230 (450)
....+.|....
T Consensus 82 ---------~~M~G~I~V~~ 92 (122)
T 2ux6_A 82 ---------PFMVGVVQVGD 92 (122)
T ss_dssp ---------EEEEEEEEESS
T ss_pred ---------ccCEEEEEEeC
Confidence 12566666654
No 137
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=82.61 E-value=0.85 Score=36.76 Aligned_cols=60 Identities=15% Similarity=0.232 Sum_probs=37.1
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAH 208 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~ 208 (450)
+..++|++|++++|. |.+. +|.+.+. ++ ..|-....+.+.+|+.+++-+ + .+|.|++.|.
T Consensus 20 P~~i~V~~GdtV~f~--n~~~---------~H~v~~~--~~--~~p~~~~~~~~~pG~t~~~tF--~-~~G~y~y~C~ 79 (123)
T 1pmy_A 20 PALVRLKPGDSIKFL--PTDK---------GHNVETI--KG--MAPDGADYVKTTVGQEAVVKF--D-KEGVYGFKCA 79 (123)
T ss_dssp SSEEEECTTCEEEEE--CSSS---------SCCCEEC--TT--SSCTTCCCCBCCTTSCEEEEC--C-SCEEEEEECS
T ss_pred CCEEEECCCCEEEEE--ECCC---------CcEEEEe--cc--cCCCCccceecCCCCEEEEEe--C-CCeEEEEEeC
Confidence 468999999998765 4442 4555543 11 011111233457999876554 5 5799999986
No 138
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=82.24 E-value=1.3 Score=37.80 Aligned_cols=40 Identities=20% Similarity=0.398 Sum_probs=32.2
Q ss_pred CCCCCeEEEEEEeCCceeeeeeccCh--hhhhcceeEEEEEec
Q 013075 27 IQPGRSYTYRFTIEDQEGTLWWHAHS--RWLRATVYGALIVYP 67 (450)
Q Consensus 27 i~pg~~~~Y~f~~~~~~Gt~wYH~H~--~~~~~Gl~G~liV~~ 67 (450)
+.||...+..|.. +++|+|++.|.. +..-++|.|-++|++
T Consensus 127 a~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 127 VLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp ECTTBCEEEEEEC-CSCEEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred ecCCceeEEEEEe-CCCEEEEEECCcCCCCCcCCCEEEEEEeC
Confidence 5689988899976 899999999974 323368999999873
No 139
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=77.27 E-value=1.4 Score=35.57 Aligned_cols=61 Identities=15% Similarity=0.116 Sum_probs=39.1
Q ss_pred eeeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeee
Q 013075 131 TVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHA 209 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~ 209 (450)
+..++|++|++++|. |.. . .|++... |+. -|.....+.+.+|+.+++-+ + .+|.|+..|..
T Consensus 21 P~~i~V~~GDTV~f~--n~~--~-------~Hnv~~~--~~~--~p~g~~~~~~~pg~t~s~TF--~-~~G~y~Y~C~~ 81 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFV--PTD--K-------SHNAESV--REV--WPEGVAPVKGGFSKEVVFNA--E-KEGLYVLKCAP 81 (124)
T ss_dssp SSEEEECTTCEEEEE--CSS--S-------SCCCEEC--TTT--SCTTSCCCBCCTTCCEEEEC--C-SSEEEEEECTT
T ss_pred CCEEEECCCCEEEEE--ECC--C-------CccEEEe--CCc--CCCCccccccCCCCEEEEEe--C-CCeEEEEEcCC
Confidence 468999999998766 443 1 4544432 221 12223345567999888766 4 57999999963
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=69.92 E-value=29 Score=30.27 Aligned_cols=63 Identities=14% Similarity=0.195 Sum_probs=46.3
Q ss_pred eeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeec
Q 013075 132 VRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYN 211 (450)
Q Consensus 132 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~ 211 (450)
-++.+..|+.+||+|-+. .-.+.|.|....+++- .-||..-.+-+.++ .+|.|+.+|.-++
T Consensus 41 n~l~lP~g~~V~~~lTS~--DViHSF~IP~lgvK~d----------------aiPGr~n~l~~~~~-~pG~y~g~CsE~C 101 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN--SVMHSFFIPRLGSQIY----------------AMAGMQTRLHLIAN-EPGTYDGICAEIC 101 (205)
T ss_dssp SEEEEETTSCEEEEEEES--SSCEEEEEGGGTEEEE----------------ECTTCCEEEEECCS-SSEEEEEEECSCC
T ss_pred ceEEEeCCCEEEEEEecC--CceeeEEecccCcEEE----------------ecCCceEEEEEEeC-CCeEEEEEccccc
Confidence 478899999999999865 4566777776655443 34677777777777 5799999998765
Q ss_pred cc
Q 013075 212 TA 213 (450)
Q Consensus 212 ~~ 213 (450)
..
T Consensus 102 G~ 103 (205)
T 1cyx_A 102 GP 103 (205)
T ss_dssp ST
T ss_pred cc
Confidence 44
No 141
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=65.78 E-value=21 Score=28.00 Aligned_cols=47 Identities=23% Similarity=0.381 Sum_probs=33.2
Q ss_pred CEEEEEEEecCCCc-eEEEEEeCcc-eEEEEeCCCccCceeecEEEecCCCeEEEEEEe
Q 013075 140 ETILLRIINSAMNQ-EHFFGVANHK-LTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTA 196 (450)
Q Consensus 140 ~~~rlRliN~~~~~-~~~~~i~gh~-~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~ 196 (450)
..|+|+|+|.+... .+.|+++|.. +.+++ + ..+.|.+|+..++-|..
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEES-------C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEeC-------C---CcEEECCCCEEEEEEEE
Confidence 57999999999654 7778888743 44432 1 14999999977665554
No 142
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=53.54 E-value=75 Score=29.44 Aligned_cols=63 Identities=13% Similarity=0.283 Sum_probs=46.9
Q ss_pred eeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeec
Q 013075 132 VRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYN 211 (450)
Q Consensus 132 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~ 211 (450)
-++.+..|+.+||++-+. +-.+.|.|....+++- .-||..-.+-+.++ .+|.|+.+|.-++
T Consensus 189 N~lvlP~g~~V~~~ltS~--DViHsf~iP~lg~k~d----------------aiPG~~n~~~~~~~-~~G~y~g~CsE~C 249 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT--DVIHAWTIPAFAVKQD----------------AVPGRIAQLWFSVD-QEGVYFGQCSELC 249 (298)
T ss_dssp SCEEEESSSEEEEEEEES--SSCEEEEEGGGTEEEE----------------ECTTCCEEEEEECS-SSEEEEECCCSCC
T ss_pred ceEEEEcCCEEEEEEEeC--CccceeeEcccCceEE----------------ecCCceEEEEEEeC-CCEEEEEEccccc
Confidence 478999999999998874 4566777776655543 34677777788888 5799999998665
Q ss_pred cc
Q 013075 212 TA 213 (450)
Q Consensus 212 ~~ 213 (450)
+.
T Consensus 250 G~ 251 (298)
T 3hb3_B 250 GI 251 (298)
T ss_dssp ST
T ss_pred Cc
Confidence 44
No 143
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=52.88 E-value=65 Score=29.27 Aligned_cols=63 Identities=11% Similarity=0.238 Sum_probs=46.4
Q ss_pred eeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeec
Q 013075 132 VRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYN 211 (450)
Q Consensus 132 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~ 211 (450)
-++.++.|+.+||++-+. .-.+.|.+.+..+++- .-||..-.+-+.++ .+|.|+..|.-++
T Consensus 171 n~l~lP~g~~v~~~~tS~--DViHsf~ip~l~~k~d----------------a~PG~~n~~~~~~~-~~G~y~g~Cse~C 231 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA--DVIHSWTVPAFGVKQD----------------AVPGRLAQLWFRAE-REGIFFGQCSELC 231 (262)
T ss_dssp SCEEEETTSEEEEEEEES--SSCEEEEEGGGTEEEE----------------ECBTCCEEEEEECC-SCEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEEC--cccceeeecccCceEE----------------ecCCceeEEEEecC-CcEEEEEEChHhc
Confidence 368999999999998754 4566777776655543 33677777777777 5799999998665
Q ss_pred cc
Q 013075 212 TA 213 (450)
Q Consensus 212 ~~ 213 (450)
+.
T Consensus 232 G~ 233 (262)
T 2gsm_B 232 GI 233 (262)
T ss_dssp ST
T ss_pred cc
Confidence 44
No 144
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=39.33 E-value=88 Score=23.33 Aligned_cols=70 Identities=9% Similarity=0.013 Sum_probs=38.8
Q ss_pred EeeCCCEEEEEEEecCCCc-eEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCC--CceeEEEeee
Q 013075 135 PVEAGETILLRIINSAMNQ-EHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQP--PARYYMAAHA 209 (450)
Q Consensus 135 ~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~--~g~y~l~~~~ 209 (450)
--+||+++++|++--.... +..-. --.+++...+|..+.- ..........++.-+.+++. .|.|.|++..
T Consensus 12 iYrPGetV~~~~~~~~~~~~p~~~~--~~~v~l~dp~g~~v~~---~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 12 IYKPGQTVKFRVVSMDENFHPLNEL--IPLVYIQDPKGNRIAQ---WQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp EECTTCEEEEEEEEECGGGCBCCCE--EEEEEEECTTSCEEEE---EEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred ccCCCCEEEEEEEEECCCCcCCCCC--ceEEEEECCCCCEEEE---EEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 3689999999987553221 11000 0134555566653211 11222334567777777653 4999999864
No 145
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=36.43 E-value=1.5e+02 Score=26.20 Aligned_cols=63 Identities=19% Similarity=0.242 Sum_probs=44.8
Q ss_pred eeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeec
Q 013075 132 VRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYN 211 (450)
Q Consensus 132 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~ 211 (450)
.++.+..|+.+|+++-+ .+-.+.+.+....+++=+ -||..-.+-+.++ .+|.|+.+|.-++
T Consensus 140 n~lvlP~~~~Vr~~vtS--~DViHsf~vP~lg~K~Da----------------iPGr~n~~~~~~~-~~G~y~g~Cse~C 200 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSS--EDVLHSWAVPSLGLKTDA----------------IPGRLNQTTLMSS-RPGLYYGQCSEIC 200 (227)
T ss_dssp SCEEEETTSCEEEEEEE--SSSCEEEEEGGGTEEEEE----------------CTTCCEEEEECCS-SCEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEe--CcccceeeecccCcEEEe----------------cCCceEEEEEecC-CcEEEEEEehhhc
Confidence 47899999999888865 345677788766555433 3566666666677 5799999998655
Q ss_pred cc
Q 013075 212 TA 213 (450)
Q Consensus 212 ~~ 213 (450)
+.
T Consensus 201 G~ 202 (227)
T 1v54_B 201 GS 202 (227)
T ss_dssp ST
T ss_pred cc
Confidence 44
No 146
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=35.41 E-value=14 Score=29.67 Aligned_cols=24 Identities=21% Similarity=0.241 Sum_probs=19.2
Q ss_pred eeEEeeCCCEEEEEEEecCCCceE
Q 013075 132 VRFPVEAGETILLRIINSAMNQEH 155 (450)
Q Consensus 132 ~~~~v~~G~~~rlRliN~~~~~~~ 155 (450)
-.|+|+.||++||.+.|-+..+.+
T Consensus 71 k~InV~~GETVrF~v~nkt~~W~F 94 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIVAWTF 94 (131)
T ss_dssp CEEEEETTCEEEEEETTEEEEEEE
T ss_pred eEEEecCCCEEEEEeCCcEEEEEE
Confidence 359999999999999988754444
No 147
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=35.24 E-value=72 Score=28.41 Aligned_cols=51 Identities=12% Similarity=0.217 Sum_probs=30.3
Q ss_pred eeEEeeCCCEEEEEEEecCCC-----ceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEE
Q 013075 132 VRFPVEAGETILLRIINSAMN-----QEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNV 192 (450)
Q Consensus 132 ~~~~v~~G~~~rlRliN~~~~-----~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv 192 (450)
..|..+-|-+..++|.|.... ....+.+||...++ .....|.|.|||.+.+
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~----------~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKH----------TAGSQLRLSPGESICL 184 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEE----------CTTCEEEECTTCEEEE
T ss_pred ccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEe----------CCCCEEEECCCCeEec
Confidence 355555565666677777643 23444444444332 1246889999999876
No 148
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=29.04 E-value=34 Score=27.36 Aligned_cols=23 Identities=22% Similarity=0.707 Sum_probs=17.7
Q ss_pred CCCCCCcccCCCCCCCeEEEEEEe
Q 013075 16 ADGPEYVTQCPIQPGRSYTYRFTI 39 (450)
Q Consensus 16 ~DGv~~~tq~~i~pg~~~~Y~f~~ 39 (450)
.|+=-+ +.|||.+|+.++|++..
T Consensus 70 ~daC~~-~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 70 TNACHF-MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp CBGGGT-SCSSBCTTCEEEEEEEE
T ss_pred CCccCC-ccCcccCCEEEEEEEEe
Confidence 344433 69999999999999766
No 149
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=27.55 E-value=1.7e+02 Score=21.39 Aligned_cols=45 Identities=7% Similarity=-0.017 Sum_probs=34.0
Q ss_pred ceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEe
Q 013075 163 KLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAA 207 (450)
Q Consensus 163 ~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~ 207 (450)
+++|+..||.|+.-..|..=.+.-+|-|.+.....+..|.+.+.+
T Consensus 4 ~v~V~d~~GkPV~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~~ 48 (82)
T 3e8v_A 4 SVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLTA 48 (82)
T ss_dssp EEEEECTTSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEEEC
T ss_pred EEEEEcCCCCCCCCCEEEEEEEEchheeEEEEEEECCCceEEEEE
Confidence 478888999988777777666666888888887766667766655
No 150
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=27.32 E-value=1e+02 Score=28.75 Aligned_cols=63 Identities=14% Similarity=0.238 Sum_probs=45.0
Q ss_pred eeEEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCceeecEEEecCCCeEEEEEEeCCCCceeEEEeeeec
Q 013075 132 VRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQPPARYYMAAHAYN 211 (450)
Q Consensus 132 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~i~l~~G~R~dv~v~~~~~~g~y~l~~~~~~ 211 (450)
.++.+..|+.+||++-.. +-.+.|.+....+++- .-||..-.+-+.++ .+|.|+.+|.-++
T Consensus 151 n~l~lP~g~~V~~~lTS~--DViHsf~IP~lg~k~D----------------aiPGr~n~~~~~~~-~~G~y~g~CsE~C 211 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN--SVMNSFFIPRLGSQIY----------------AMAGMQTRLHLIAN-EPGTYDGISASYS 211 (315)
T ss_dssp SBCCCCSSSEEEEEECBS--SSCEEEEEGGGTEEEE----------------ECBTSCEEEEEECC-SCBCCEEBCCSCC
T ss_pred ceEEEeCCCEEEEEEEeC--CccceeeecccCcEEe----------------ecCCcceeeEEecC-CCeEEEEeccccc
Confidence 367889999998888643 4566777776655543 34677777777787 5799999998655
Q ss_pred cc
Q 013075 212 TA 213 (450)
Q Consensus 212 ~~ 213 (450)
..
T Consensus 212 G~ 213 (315)
T 1fft_B 212 GP 213 (315)
T ss_dssp ST
T ss_pred hh
Confidence 43
No 151
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=25.61 E-value=59 Score=25.97 Aligned_cols=21 Identities=24% Similarity=0.388 Sum_probs=14.8
Q ss_pred CCCCCCcccCCCCCCCeEEEEE
Q 013075 16 ADGPEYVTQCPIQPGRSYTYRF 37 (450)
Q Consensus 16 ~DGv~~~tq~~i~pg~~~~Y~f 37 (450)
.+||-|- |+-|.||++|+|.=
T Consensus 66 G~GVVG~-qP~L~PGe~f~YtS 86 (127)
T 2f1e_A 66 GEGVVGE-QPWLRPGEAFHYTS 86 (127)
T ss_dssp ESSBTTB-CCEECTTCEEEEEE
T ss_pred CCCeecC-CCcCCCCCceEEeC
Confidence 3677553 66689999887754
No 152
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=25.21 E-value=54 Score=26.67 Aligned_cols=20 Identities=25% Similarity=0.321 Sum_probs=14.4
Q ss_pred CCCCCcccCCCCCCCeEEEEE
Q 013075 17 DGPEYVTQCPIQPGRSYTYRF 37 (450)
Q Consensus 17 DGv~~~tq~~i~pg~~~~Y~f 37 (450)
+||-|- |+-|.||++|+|.=
T Consensus 71 ~GVVGe-qPvL~PGe~F~YtS 90 (139)
T 1xq4_A 71 LGVVGQ-QPLLAPGETFEYTS 90 (139)
T ss_dssp ESSSSC-CCEECTTCEEEEEE
T ss_pred CCeecC-CCcCCCCCceEEcC
Confidence 666543 66689999887764
No 153
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=25.03 E-value=44 Score=26.68 Aligned_cols=24 Identities=29% Similarity=0.675 Sum_probs=18.2
Q ss_pred CCCCCCcccCCCCCCCeEEEEEEe
Q 013075 16 ADGPEYVTQCPIQPGRSYTYRFTI 39 (450)
Q Consensus 16 ~DGv~~~tq~~i~pg~~~~Y~f~~ 39 (450)
.|+=..-+.|||.+|+.++|.+.+
T Consensus 71 ~daC~~g~~CPl~~G~~~~y~~~l 94 (130)
T 1nep_A 71 SDGCKSGIRCPIEKDKTYNYVNKL 94 (130)
T ss_dssp CBGGGTTCCSSBCTTCEEEEEEEE
T ss_pred CCcccCCCcCcccCCcEEEEEEEe
Confidence 354422259999999999999877
No 154
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=23.53 E-value=2e+02 Score=24.15 Aligned_cols=74 Identities=5% Similarity=0.003 Sum_probs=42.2
Q ss_pred EEeeCCCEEEEEEEecCCCceEEEEEeCcceEEEEeCCCccCc---e--eecE-EE-ecCCCeEEEEEEeCC--CCceeE
Q 013075 134 FPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKP---F--PTSV-IM-IAPGQTTNVLLTADQ--PPARYY 204 (450)
Q Consensus 134 ~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P---~--~~~~-i~-l~~G~R~dv~v~~~~--~~g~y~ 204 (450)
-.+..|+.++||+---.....-.+.+ .|.|...+|..+-- . .... -. +.+|+.+.+.+.++- .+|.|.
T Consensus 64 ~~~~~Ge~v~l~i~~~~~~~i~~~v~---G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~G~~~~v~f~f~l~L~~G~Y~ 140 (188)
T 2r5o_A 64 PSLTGNQQTDFLMKVVFEYDFDCVVP---GILIKTLDGLFLYGTNSFLASEGRENISVSRGDVRVFKFSLPVDLNSGDYL 140 (188)
T ss_dssp SSEETTCEEEEEEEEEESSCEEEEEE---EEEEEETTCCEEEEEEHHHHTTTCCCEEECTTCEEEEEEEEECCBCSEEEE
T ss_pred eEEeCCCEEEEEEEEEECCcCCccEE---EEEEECCCCCEEEecCcccccccccccccCCCCEEEEEEEEecccCCCeEE
Confidence 34778888887776554332222222 24555666666521 0 1111 23 578997666555543 469999
Q ss_pred EEeeee
Q 013075 205 MAAHAY 210 (450)
Q Consensus 205 l~~~~~ 210 (450)
|.+...
T Consensus 141 lsv~i~ 146 (188)
T 2r5o_A 141 LSFGIS 146 (188)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 988653
No 155
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=23.43 E-value=60 Score=25.90 Aligned_cols=21 Identities=33% Similarity=0.352 Sum_probs=14.8
Q ss_pred CCCCCCcccCCCCCCCeEEEEE
Q 013075 16 ADGPEYVTQCPIQPGRSYTYRF 37 (450)
Q Consensus 16 ~DGv~~~tq~~i~pg~~~~Y~f 37 (450)
.+||-|- |+-|.||++|+|.=
T Consensus 65 G~GVVG~-qP~L~PGe~f~YtS 85 (126)
T 1xvs_A 65 GDGVVGE-QPRIKANDEYTYSS 85 (126)
T ss_dssp EESBTTB-CCEECTTCEEEEEE
T ss_pred CCceEcC-CCcCCCCCceEEeC
Confidence 3667553 66689999887764
No 156
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=22.95 E-value=60 Score=25.64 Aligned_cols=37 Identities=11% Similarity=0.310 Sum_probs=25.6
Q ss_pred CCCCCCCc---ccCCCCCCCeEEEEEEeCC--ceeeeeeccC
Q 013075 15 WADGPEYV---TQCPIQPGRSYTYRFTIED--QEGTLWWHAH 51 (450)
Q Consensus 15 ~~DGv~~~---tq~~i~pg~~~~Y~f~~~~--~~Gt~wYH~H 51 (450)
|+||-... .+--|+||++.+|+...++ .+|+|..+.-
T Consensus 59 wS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a~ 100 (120)
T 3isy_A 59 YSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKVT 100 (120)
T ss_dssp TTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEEE
T ss_pred ccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEEE
Confidence 45664332 2234899999999999853 4899988753
No 157
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=22.82 E-value=1e+02 Score=26.97 Aligned_cols=20 Identities=15% Similarity=0.268 Sum_probs=18.5
Q ss_pred eeeEEeeCCCEEEEEEEecC
Q 013075 131 TVRFPVEAGETILLRIINSA 150 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~ 150 (450)
+|.+++++|+...|||+..+
T Consensus 54 PPl~rl~p~~~q~lRI~~~~ 73 (218)
T 2xg5_A 54 PPVQRLEPGAKSMVRLSTTP 73 (218)
T ss_dssp CSEEEECTTCEEEEEEEECG
T ss_pred CCeEEECCCCceEEEEEecC
Confidence 58999999999999999887
No 158
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=22.28 E-value=53 Score=26.53 Aligned_cols=20 Identities=25% Similarity=0.318 Sum_probs=14.4
Q ss_pred CCCCCcccCCCCCCCeEEEEE
Q 013075 17 DGPEYVTQCPIQPGRSYTYRF 37 (450)
Q Consensus 17 DGv~~~tq~~i~pg~~~~Y~f 37 (450)
+||-|- |+-|.||++|+|.=
T Consensus 66 ~GVVGe-qP~L~PGe~F~YtS 85 (134)
T 1tza_A 66 AGVVGE-TPTIPPNTAYQYTS 85 (134)
T ss_dssp ESBTTB-CCEECTTEEEEEEE
T ss_pred CceEcC-CCcCCCCCceEEcC
Confidence 667553 66689999887764
No 159
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=20.27 E-value=1.6e+02 Score=25.84 Aligned_cols=21 Identities=24% Similarity=0.248 Sum_probs=19.0
Q ss_pred eeeEEeeCCCEEEEEEEecCC
Q 013075 131 TVRFPVEAGETILLRIINSAM 151 (450)
Q Consensus 131 ~~~~~v~~G~~~rlRliN~~~ 151 (450)
+|.+++++|+...|||+..+.
T Consensus 65 PPl~Rl~p~~~q~lRI~~~~~ 85 (218)
T 4ay0_A 65 PPLFRLDAKQQNSLRIAQAGG 85 (218)
T ss_dssp SSEEEECTTCEEEEEEEECSC
T ss_pred CCeEEeCCCCceEEEEEecCC
Confidence 589999999999999998874
Done!