Query 013076
Match_columns 450
No_of_seqs 263 out of 1572
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 00:09:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013076.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013076hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02693 IAA-amino acid hydrol 100.0 7.3E-63 1.6E-67 495.6 50.0 407 39-450 31-437 (437)
2 PLN02280 IAA-amino acid hydrol 100.0 4.7E-62 1E-66 492.4 48.9 381 54-434 96-476 (478)
3 PRK06915 acetylornithine deace 100.0 2.3E-56 5E-61 450.8 39.4 374 39-434 3-420 (422)
4 COG1473 AbgB Metal-dependent a 100.0 2.9E-55 6.4E-60 426.6 44.4 382 44-433 4-390 (392)
5 PRK08588 succinyl-diaminopimel 100.0 6.3E-56 1.4E-60 441.5 38.6 356 55-432 2-376 (377)
6 PRK13013 succinyl-diaminopimel 100.0 3.9E-54 8.5E-59 435.6 39.4 368 43-433 4-423 (427)
7 PRK06133 glutamate carboxypept 100.0 1.6E-53 3.4E-58 427.6 43.2 367 41-434 25-409 (410)
8 TIGR01891 amidohydrolases amid 100.0 1.4E-53 3.1E-58 422.0 40.5 356 58-417 2-360 (363)
9 PRK07338 hypothetical protein; 100.0 1.7E-53 3.6E-58 427.5 40.6 364 40-433 4-399 (402)
10 PRK06837 acetylornithine deace 100.0 5.2E-53 1.1E-57 426.3 38.6 371 40-433 7-423 (427)
11 PRK13009 succinyl-diaminopimel 100.0 2.3E-52 5.1E-57 415.7 38.5 355 56-432 3-374 (375)
12 PRK08596 acetylornithine deace 100.0 3.1E-52 6.7E-57 419.9 38.8 371 43-435 3-419 (421)
13 PRK13004 peptidase; Reviewed 100.0 3E-52 6.4E-57 417.5 37.7 370 42-434 4-398 (399)
14 PRK13983 diaminopimelate amino 100.0 1.6E-52 3.5E-57 420.5 35.5 360 55-430 5-399 (400)
15 TIGR03526 selenium_YgeY putati 100.0 2.3E-52 5E-57 417.8 36.0 365 43-433 3-395 (395)
16 TIGR03320 ygeY M20/DapE family 100.0 2.2E-52 4.8E-57 418.1 35.6 366 43-433 3-395 (395)
17 TIGR01910 DapE-ArgE acetylorni 100.0 5.5E-53 1.2E-57 419.9 28.4 348 59-423 2-375 (375)
18 TIGR01880 Ac-peptdase-euk N-ac 100.0 1.1E-51 2.4E-56 413.9 36.8 363 55-432 9-398 (400)
19 TIGR01246 dapE_proteo succinyl 100.0 8.9E-52 1.9E-56 410.6 35.6 353 58-431 2-370 (370)
20 PRK06446 hypothetical protein; 100.0 1.5E-51 3.2E-56 416.5 35.8 361 55-432 2-434 (436)
21 PRK07522 acetylornithine deace 100.0 1.7E-51 3.8E-56 410.9 34.4 349 55-432 4-384 (385)
22 PRK08201 hypothetical protein; 100.0 4.3E-51 9.4E-56 415.9 37.7 372 42-432 3-454 (456)
23 PRK05111 acetylornithine deace 100.0 4.8E-51 1E-55 407.4 37.0 348 55-433 5-382 (383)
24 PRK08651 succinyl-diaminopimel 100.0 3.8E-51 8.2E-56 409.6 35.6 353 55-433 6-392 (394)
25 TIGR01892 AcOrn-deacetyl acety 100.0 4.1E-51 8.9E-56 405.3 34.3 338 59-427 1-363 (364)
26 PRK09133 hypothetical protein; 100.0 1.2E-50 2.5E-55 414.3 38.5 359 55-433 37-470 (472)
27 PRK07473 carboxypeptidase; Pro 100.0 8.8E-50 1.9E-54 395.5 39.2 346 55-431 11-375 (376)
28 PRK08652 acetylornithine deace 100.0 3.7E-50 8E-55 395.9 34.5 338 55-433 2-346 (347)
29 PRK07907 hypothetical protein; 100.0 1.1E-49 2.4E-54 404.5 38.8 370 41-432 6-447 (449)
30 PRK00466 acetyl-lysine deacety 100.0 6.1E-50 1.3E-54 393.5 35.3 332 55-434 10-345 (346)
31 PRK09104 hypothetical protein; 100.0 1.7E-49 3.6E-54 404.9 39.7 373 41-432 5-462 (464)
32 PRK08262 hypothetical protein; 100.0 1.8E-49 4E-54 406.9 34.6 366 55-433 44-485 (486)
33 PRK04443 acetyl-lysine deacety 100.0 4.8E-49 1E-53 387.3 34.7 334 55-431 6-348 (348)
34 PRK07906 hypothetical protein; 100.0 5.8E-49 1.3E-53 397.3 33.8 358 58-430 2-425 (426)
35 TIGR01886 dipeptidase dipeptid 100.0 2E-48 4.3E-53 395.6 35.4 357 44-432 4-465 (466)
36 TIGR01883 PepT-like peptidase 100.0 2.2E-48 4.7E-53 385.2 34.2 340 57-428 2-360 (361)
37 PRK08737 acetylornithine deace 100.0 2.8E-48 6.2E-53 382.6 34.8 333 55-429 6-362 (364)
38 TIGR01900 dapE-gram_pos succin 100.0 2.7E-48 5.8E-53 384.8 34.5 333 60-413 1-373 (373)
39 PRK13007 succinyl-diaminopimel 100.0 4.1E-48 8.9E-53 381.9 35.4 333 55-428 7-351 (352)
40 PRK07079 hypothetical protein; 100.0 1.3E-47 2.8E-52 391.4 37.0 370 42-435 8-458 (469)
41 PRK13381 peptidase T; Provisio 100.0 2.3E-47 5.1E-52 382.8 36.9 348 57-432 3-403 (404)
42 COG0624 ArgE Acetylornithine d 100.0 4E-47 8.7E-52 382.0 37.4 361 55-433 13-408 (409)
43 PRK07318 dipeptidase PepV; Rev 100.0 2.5E-47 5.5E-52 388.6 34.5 360 43-433 4-466 (466)
44 PRK06156 hypothetical protein; 100.0 2.4E-46 5.1E-51 385.1 39.3 359 48-433 41-516 (520)
45 PRK05469 peptidase T; Provisio 100.0 1.8E-46 3.9E-51 376.9 36.0 352 55-434 2-407 (408)
46 PRK12892 allantoate amidohydro 100.0 3.8E-46 8.2E-51 375.4 37.1 346 55-433 10-411 (412)
47 PRK07205 hypothetical protein; 100.0 2E-46 4.2E-51 380.3 33.7 352 55-433 11-443 (444)
48 PRK12893 allantoate amidohydro 100.0 1E-45 2.2E-50 372.1 38.5 346 55-433 10-410 (412)
49 TIGR01902 dapE-lys-deAc N-acet 100.0 3.6E-46 7.8E-51 365.4 31.8 327 59-433 1-335 (336)
50 PRK09290 allantoate amidohydro 100.0 2.8E-45 6E-50 368.7 37.0 347 55-434 7-412 (413)
51 TIGR01882 peptidase-T peptidas 100.0 1.7E-45 3.7E-50 369.2 32.9 351 55-432 3-407 (410)
52 PRK12891 allantoate amidohydro 100.0 2.3E-44 5E-49 361.7 38.1 333 70-435 35-412 (414)
53 PRK12890 allantoate amidohydro 100.0 1.7E-43 3.7E-48 355.9 39.8 343 56-433 10-412 (414)
54 TIGR01887 dipeptidaselike dipe 100.0 2.7E-43 5.9E-48 355.2 33.3 344 55-428 2-447 (447)
55 TIGR01879 hydantase amidase, h 100.0 7.8E-43 1.7E-47 349.4 36.2 330 69-431 25-401 (401)
56 TIGR01893 aa-his-dipept aminoa 100.0 5.6E-43 1.2E-47 357.5 35.7 348 55-431 4-476 (477)
57 PRK15026 aminoacyl-histidine d 100.0 2.9E-42 6.3E-47 349.5 36.8 343 55-431 10-482 (485)
58 KOG2275 Aminoacylase ACY1 and 100.0 2.7E-41 5.8E-46 318.1 33.6 362 55-432 25-418 (420)
59 KOG2276 Metalloexopeptidases [ 100.0 1.3E-41 2.9E-46 316.5 29.0 373 41-433 4-472 (473)
60 TIGR03176 AllC allantoate amid 100.0 1.4E-40 3E-45 332.4 37.6 345 55-433 3-404 (406)
61 PRK08554 peptidase; Reviewed 100.0 1.5E-41 3.4E-46 342.0 30.1 355 56-432 2-437 (438)
62 PRK13590 putative bifunctional 100.0 7.2E-40 1.6E-44 340.4 38.6 346 55-434 181-589 (591)
63 PRK13799 unknown domain/N-carb 100.0 1.4E-39 3.1E-44 337.8 39.6 345 54-433 180-590 (591)
64 COG2195 PepD Di- and tripeptid 99.9 5.9E-26 1.3E-30 221.3 21.4 350 55-432 5-412 (414)
65 PF01546 Peptidase_M20: Peptid 99.9 1.2E-22 2.6E-27 182.3 13.2 176 114-430 1-189 (189)
66 COG4187 RocB Arginine degradat 99.8 1.6E-18 3.4E-23 164.1 17.3 259 55-318 8-323 (553)
67 PF07687 M20_dimer: Peptidase 99.7 9.4E-18 2E-22 136.9 11.3 104 220-323 2-110 (111)
68 PRK09961 exoaminopeptidase; Pr 99.7 6.1E-16 1.3E-20 150.5 23.0 249 58-431 3-333 (344)
69 TIGR03106 trio_M42_hydro hydro 99.7 8E-16 1.7E-20 149.2 23.4 129 55-184 3-223 (343)
70 TIGR03107 glu_aminopep glutamy 99.7 6.3E-15 1.4E-19 142.8 23.0 244 59-431 2-341 (350)
71 COG1363 FrvX Cellulase M and r 99.7 8.9E-15 1.9E-19 140.0 22.7 250 55-433 2-348 (355)
72 PRK10199 alkaline phosphatase 99.7 3.9E-15 8.5E-20 142.1 18.5 129 57-190 37-188 (346)
73 PRK09864 putative peptidase; P 99.6 6.7E-14 1.5E-18 135.4 23.8 247 58-431 3-341 (356)
74 PF05343 Peptidase_M42: M42 gl 98.7 3.1E-07 6.8E-12 87.4 13.3 68 346-423 222-292 (292)
75 KOG2194 Aminopeptidases of the 98.1 2.4E-05 5.1E-10 82.2 10.9 133 55-202 57-223 (834)
76 PF04389 Peptidase_M28: Peptid 98.1 1.1E-05 2.5E-10 71.3 7.6 80 112-202 2-87 (179)
77 KOG2526 Predicted aminopeptida 96.4 0.049 1.1E-06 53.0 11.9 114 79-203 165-304 (555)
78 KOG3946 Glutaminyl cyclase [Po 96.1 0.21 4.5E-06 46.2 13.8 124 55-189 51-199 (338)
79 COG2234 Iap Predicted aminopep 95.9 0.027 5.8E-07 57.3 8.3 44 147-192 231-275 (435)
80 PRK00913 multifunctional amino 95.2 0.44 9.6E-06 48.6 13.6 131 45-179 161-309 (483)
81 KOG2195 Transferrin receptor a 95.1 0.066 1.4E-06 56.8 7.6 78 98-191 338-421 (702)
82 cd00433 Peptidase_M17 Cytosol 94.4 1.4 2.9E-05 45.1 14.9 125 53-179 152-295 (468)
83 PF00883 Peptidase_M17: Cytoso 94.1 0.7 1.5E-05 44.2 11.4 110 58-179 1-140 (311)
84 PF05450 Nicastrin: Nicastrin; 93.0 0.38 8.2E-06 44.3 7.4 67 111-190 1-74 (234)
85 PRK05015 aminopeptidase B; Pro 91.1 8.5 0.00018 38.4 14.5 120 55-179 100-246 (424)
86 KOG2597 Predicted aminopeptida 90.9 2.3 4.9E-05 43.2 10.6 123 55-179 189-330 (513)
87 PTZ00412 leucyl aminopeptidase 90.4 7.6 0.00017 40.1 13.9 128 47-179 204-354 (569)
88 PRK02256 putative aminopeptida 90.3 0.43 9.3E-06 48.5 5.1 76 345-429 380-460 (462)
89 PTZ00371 aspartyl aminopeptida 89.5 0.71 1.5E-05 47.1 6.0 79 345-432 373-456 (465)
90 PRK02813 putative aminopeptida 89.3 0.58 1.3E-05 47.2 5.1 75 345-428 346-425 (428)
91 TIGR01893 aa-his-dipept aminoa 88.1 0.95 2.1E-05 46.6 6.0 45 269-319 335-379 (477)
92 COG0260 PepB Leucyl aminopepti 85.2 21 0.00045 36.6 13.4 117 55-179 167-308 (485)
93 COG4882 Predicted aminopeptida 52.7 30 0.00064 33.7 5.3 70 100-190 180-259 (486)
94 PF08139 LPAM_1: Prokaryotic m 51.1 18 0.00038 20.5 2.2 17 7-23 7-23 (25)
95 PRK15026 aminoacyl-histidine d 49.3 58 0.0013 33.6 7.4 44 271-320 343-386 (485)
96 cd06406 PB1_P67 A PB1 domain i 49.3 1E+02 0.0022 23.1 6.6 57 292-353 9-65 (80)
97 PRK06156 hypothetical protein; 43.7 1.7E+02 0.0037 30.5 10.0 25 273-297 240-264 (520)
98 KOG3566 Glycosylphosphatidylin 41.6 3.1E+02 0.0066 28.8 10.7 112 55-190 70-193 (617)
99 COG4635 HemG Flavodoxin [Energ 38.2 20 0.00043 30.7 1.6 33 63-95 3-35 (175)
100 PRK02256 putative aminopeptida 37.8 50 0.0011 33.8 4.7 43 139-185 253-298 (462)
101 PF13956 Ibs_toxin: Toxin Ibs, 33.9 21 0.00045 18.3 0.7 10 7-16 1-10 (19)
102 COG0766 MurA UDP-N-acetylgluco 33.5 1.7E+02 0.0036 29.2 7.2 65 248-316 193-271 (421)
103 PF04114 Gaa1: Gaa1-like, GPI 29.3 2.2E+02 0.0048 29.5 7.9 73 98-191 3-78 (504)
104 PF09940 DUF2172: Domain of un 28.5 2E+02 0.0043 28.4 6.9 68 101-190 118-187 (386)
105 PF03668 ATP_bind_2: P-loop AT 28.4 80 0.0017 29.9 4.1 32 272-304 160-191 (284)
106 PRK02813 putative aminopeptida 28.0 71 0.0015 32.4 4.0 42 140-186 228-275 (428)
107 COG2195 PepD Di- and tripeptid 26.6 84 0.0018 31.7 4.1 69 111-185 62-139 (414)
108 PRK13883 conjugal transfer pro 25.4 2.3E+02 0.0049 24.2 5.9 19 76-94 64-82 (151)
109 TIGR01887 dipeptidaselike dipe 24.5 1.9E+02 0.0041 29.5 6.4 25 276-300 193-217 (447)
110 COG1362 LAP4 Aspartyl aminopep 23.6 1.3E+02 0.0029 30.1 4.7 77 345-430 354-435 (437)
111 PRK14864 putative biofilm stre 22.0 61 0.0013 25.7 1.7 24 70-93 58-81 (104)
112 TIGR01886 dipeptidase dipeptid 20.4 4.4E+02 0.0096 26.9 8.2 24 275-298 203-226 (466)
113 PRK05416 glmZ(sRNA)-inactivati 20.4 1E+02 0.0023 29.3 3.3 32 273-305 164-195 (288)
No 1
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=7.3e-63 Score=495.61 Aligned_cols=407 Identities=63% Similarity=1.045 Sum_probs=345.7
Q ss_pred ChhHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEee
Q 013076 39 DIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRAD 118 (450)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H 118 (450)
+.+.++.+..++.+..+++++++++|+++|++|++|.++++||.++|+++||+++...+++||+|.++++++|+|+|+||
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~g~~~g~~i~l~~h 110 (437)
T PLN02693 31 QIQINLLELAKSPEVFDWMVRIRRKIHENPELGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYIGTGEPPFVALRAD 110 (437)
T ss_pred hhHHHHHHHhhhhhhHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEECCCCCCEEEEEee
Confidence 34555666555522337799999999999999999999999999999999999875446789999996555699999999
Q ss_pred ccCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCccchHHHHHcccccccce
Q 013076 119 MDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNA 198 (450)
Q Consensus 119 ~DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~~Ga~~l~~~~~~~~~d~ 198 (450)
|||||+++..+|++++..+|++||||+|+++|++++|+++|++.+..++++|.|+|++|||++.|++.++++|.+++.|+
T Consensus 111 ~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~~~ 190 (437)
T PLN02693 111 MDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEA 190 (437)
T ss_pred cCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCCCCCCE
Confidence 99999988788999988899999999999999999999999988767889999999999997689999999988777789
Q ss_pred EEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEE
Q 013076 199 IFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAK 278 (450)
Q Consensus 199 ~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~ 278 (450)
++++|.++..+.|.+..+.|..++|..+++|+++|+++|++.|+.|+|||..+++++.+|+++..+..++....+++++.
T Consensus 191 iig~h~~p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~vg~ 270 (437)
T PLN02693 191 IFGIHLSPRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSK 270 (437)
T ss_pred EEEEecCCCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEE
Confidence 99999988778888877878888999999999999999999999999999999999999999866655566678999999
Q ss_pred EecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHH
Q 013076 279 FQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAG 358 (450)
Q Consensus 279 i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 358 (450)
|+||...|+||++|++.+|+|+.++. +.+.++|+++++..+..+++.+++++.....+++++..+|+++++.++++++
T Consensus 271 i~GG~~~NvVPd~a~~~~diR~~~~~--~~i~~~i~~i~~~~a~~~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~~~ 348 (437)
T PLN02693 271 VNGGNAFNVIPDSITIGGTLRAFTGF--TQLQQRIKEIITKQAAVHRCNASVNLTPNGREPMPPTVNNMDLYKQFKKVVR 348 (437)
T ss_pred EEcCCCCceECCeEEEEEEEecCCHH--HHHHHHHHHHHHHHHHHhCCcEEEEEeecCccCCCCccCCHHHHHHHHHHHH
Confidence 99999999999999999999999974 5899999999998877788877776631113456777888899999999999
Q ss_pred hhcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhhcCCC
Q 013076 359 DMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEFGPE 438 (450)
Q Consensus 359 ~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~~~~ 438 (450)
+.+|.+++......+|++|+++|.+.+|++++.+|+.+...| ....|+|+++++.+.|..++++|+.++.++++.....
T Consensus 349 ~~~G~~~~~~~~~~~gseDf~~~~~~vP~~~~~lG~~~~~~~-~~~~H~~~f~~de~~l~~~~~~~~~~~~~~l~~~~~~ 427 (437)
T PLN02693 349 DLLGQEAFVEAAPEMGSEDFSYFAETIPGHFSLLGMQDETNG-YASSHSPLYRINEDVLPYGAAIHATMAVQYLKEKASK 427 (437)
T ss_pred HhcCCcceeecCCCceechHHHHHHHhhhhEEEEecCCCCCC-CCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 988876542234567999999999999999889998742101 1469999999999999999999999999999753332
Q ss_pred CCCCCCCCCCCC
Q 013076 439 ISLPEGNYRDEL 450 (450)
Q Consensus 439 ~~~~~~~~~~~~ 450 (450)
-+. ...+||+
T Consensus 428 ~~~--~~~~~~~ 437 (437)
T PLN02693 428 GSV--SGFHDEL 437 (437)
T ss_pred CCC--CCCccCC
Confidence 222 6677775
No 2
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=4.7e-62 Score=492.42 Aligned_cols=381 Identities=59% Similarity=1.021 Sum_probs=335.1
Q ss_pred HHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCCCCcCcCCCccc
Q 013076 54 VGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYK 133 (450)
Q Consensus 54 ~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~~~ 133 (450)
.+.+.++.++++++|+++++|.++++||.++|+++||++++...++|++|+++++++|+|+|+|||||||+++..+|+++
T Consensus 96 ~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~~~~~~~~~~~vva~~g~~~~~~I~l~gh~DaVP~~e~~~w~~~ 175 (478)
T PLN02280 96 VAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGIMYRYPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEAVEWEHK 175 (478)
T ss_pred HHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCeEEecCCCCEEEEEECCCCCCEEEEEEecCCCcccCCCCCCCC
Confidence 37788899999999999999999999999999999999887666889999995444589999999999999887789999
Q ss_pred cCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCccchHHHHHcccccccceEEEeccCCCCCCceE
Q 013076 134 SKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEV 213 (450)
Q Consensus 134 ~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~ 213 (450)
++++|++||||+|+++|++|+|+++|++.+.+++++|.|+|++|||.+.|+++++++|.++++|+++++|..+..|++.+
T Consensus 176 p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g~Ga~~li~~g~~~~~d~~~~~h~~~~~p~g~i 255 (478)
T PLN02280 176 SKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDDVEAIFAVHVSHEHPTAVI 255 (478)
T ss_pred CCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecccccccchHHHHHHCCCCcCCCEEEEEecCCCCCCcee
Confidence 99999999999999999999999999887777899999999999996569999999998888899999998766788877
Q ss_pred EeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEE
Q 013076 214 ASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVL 293 (450)
Q Consensus 214 ~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~ 293 (450)
..+.+...+|..+++|+++|+++|++.|+.|+|||..+++++..++++..+..++....+++++.|+||...|+||++|+
T Consensus 256 g~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~~~~~~~~tvnvg~I~GG~~~NvIPd~~~ 335 (478)
T PLN02280 256 GSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSREANPLDSQVVSVTTMDGGNNLDMIPDTVV 335 (478)
T ss_pred EecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEEccCCCCEeCCEEE
Confidence 77777778899999999999999999999999999999999999999876655556678999999999999999999999
Q ss_pred EEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCc
Q 013076 294 IGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVM 373 (450)
Q Consensus 294 ~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~ 373 (450)
+.+|+|+.++++.+++.++|+++++..+..+++++++++.......+++..+++++++.+++++.+.+|.+.+......+
T Consensus 336 l~~diR~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~v~~~~~~~~~~pp~~n~~~l~~~~~~~a~~~~G~~~~~~~~~~~ 415 (478)
T PLN02280 336 LGGTFRAFSNTSFYQLLKRIQEVIVEQAGVFRCSATVDFFEKQNTIYPPTVNNDAMYEHVRKVAIDLLGPANFTVVPPMM 415 (478)
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHHhcCccccccCCCCe
Confidence 99999999999999999999999998877788887776521112457788889999999999988876765321223567
Q ss_pred ccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhh
Q 013076 374 GSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLE 434 (450)
Q Consensus 374 g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 434 (450)
|++|+++|.+.+|++++++|+.+..||....+|+++|++++++|..++++|+.++.+++..
T Consensus 416 g~tD~~~~~~~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~L~~~~~~~~~~~~~~l~~ 476 (478)
T PLN02280 416 GAEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAAVHAAIAERYLIE 476 (478)
T ss_pred eechHHHHHhhCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999998899999988987655666678999999999999999999999999999864
No 3
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=2.3e-56 Score=450.84 Aligned_cols=374 Identities=20% Similarity=0.270 Sum_probs=307.4
Q ss_pred ChhHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecc--------------------cCC
Q 013076 39 DIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP--------------------VAV 98 (450)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--------------------~~~ 98 (450)
+.++++++++++++ +++++++++|++|||+|++|.++++||+++|+++|+++++. .++
T Consensus 3 ~~~~~~~~~~~~~~--~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (422)
T PRK06915 3 QLKKQICDYIESHE--EEAVKLLKRLIQEKSVSGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDS 80 (422)
T ss_pred HHHHHHHHHHHhhH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCC
Confidence 46788999999988 99999999999999999999999999999999999997531 246
Q ss_pred ceEEEEEcCC-CCceEEEEeeccCCCCcCcCCC---cccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceE
Q 013076 99 TGVVGFIGTG-EPPFVALRADMDSLPLQEMVEW---EYKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTV 170 (450)
Q Consensus 99 ~nvva~~~~~-~~~~ill~~H~DvVp~~~~~~w---~~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i 170 (450)
+||++++++. ++|+|+|+|||||||+++...| ||.+ ++||+|||||+ ||+++++|.|+++|++.+.+++++|
T Consensus 81 ~nlia~~~g~~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v 160 (422)
T PRK06915 81 PNIVATLKGSGGGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDV 160 (422)
T ss_pred ceEEEEEcCCCCCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcE
Confidence 8999999653 4689999999999999888889 5554 46999999998 8999999999999998887888999
Q ss_pred EEEEecCCC-CccchHHHHHcccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHH
Q 013076 171 VLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPIL 249 (450)
Q Consensus 171 ~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~ 249 (450)
.|+|++||| ++.|+..++.++. +.|+++.. +|++.. ...+++|..+++|+++|+++|+|.|+.|+|||.
T Consensus 161 ~~~~~~dEE~g~~G~~~~~~~~~--~~d~~i~~-----ep~~~~---i~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~ 230 (422)
T PRK06915 161 IFQSVIEEESGGAGTLAAILRGY--KADGAIIP-----EPTNMK---FFPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIE 230 (422)
T ss_pred EEEEecccccCCcchHHHHhcCc--CCCEEEEC-----CCCCcc---ceeecccEEEEEEEEEeeccccCCCCcCcCHHH
Confidence 999999999 7789888888764 46877752 344421 224578999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhcc----cCCCC-----CCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 013076 250 AASNVIVSLQHLVSR----EADPL-----DSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQ 320 (450)
Q Consensus 250 ~~~~~l~~l~~~~~~----~~~~~-----~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~ 320 (450)
.+++++..|+++... ..++. .+.++|++.|+||...|+||++|++.+|+|+.|+++.+++.++|++.+++.
T Consensus 231 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~~ 310 (422)
T PRK06915 231 KSMFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEGGSWPSSVPDSVILEGRCGIAPNETIEAAKEEFENWIAEL 310 (422)
T ss_pred HHHHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEEeeCCCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 999999999887532 11111 245899999999999999999999999999999999999999999999876
Q ss_pred HHhh----CCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh--cCeEEEEecc
Q 013076 321 AAVQ----RCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV--MPGYFFFLGM 394 (450)
Q Consensus 321 ~~~~----~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--~p~~~~~~G~ 394 (450)
+... +..+++++......++ +...|+++++.+++++++++|.++. ....+|++|+++|.+. +|+++ |||
T Consensus 311 ~~~~~~~~~~~~~v~~~~~~~~~~-~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~~g~tD~~~~~~~~giP~v~--fGp 385 (422)
T PRK06915 311 NDVDEWFVEHPVEVEWFGARWVPG-ELEENHPLMTTLEHNFVEIEGNKPI--IEASPWGTDGGLLTQIAGVPTIV--FGP 385 (422)
T ss_pred hccChhhhcCCceEEeecccCCcc-cCCCCCHHHHHHHHHHHHHhCCCCe--eceeeeeccHHHHhccCCCCEEE--ECC
Confidence 5421 2234444321101122 3456789999999999998888764 3467889999999985 99866 554
Q ss_pred cCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhh
Q 013076 395 KNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLE 434 (450)
Q Consensus 395 ~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 434 (450)
+ ....+|++||+++++++.+++++|+.++.++|+.
T Consensus 386 g-----~~~~aH~~dE~v~~~~l~~~~~~~~~ll~~~~~~ 420 (422)
T PRK06915 386 G-----ETKVAHYPNEYIEVDKMIAAAKIIALTLLDWCEV 420 (422)
T ss_pred C-----CccccCCCCceeEHHHHHHHHHHHHHHHHHHhCC
Confidence 3 2357999999999999999999999999999864
No 4
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=2.9e-55 Score=426.58 Aligned_cols=382 Identities=46% Similarity=0.768 Sum_probs=345.0
Q ss_pred HHHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceeccc-CCceEEEEEcCC-CCceEEEEeeccC
Q 013076 44 LLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV-AVTGVVGFIGTG-EPPFVALRADMDS 121 (450)
Q Consensus 44 ~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~~nvva~~~~~-~~~~ill~~H~Dv 121 (450)
+.+.+ ... ++++++.|+|+++|+++++|.++++||+++|+++||++.... .+++|+|.++++ ++|+|+|++.||.
T Consensus 4 ~~~~~-~~~--~~l~~~rr~lH~~PEL~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~g~tIalRAD~DA 80 (392)
T COG1473 4 ILDEI-ELK--DELIEWRRDLHEHPELGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKPGPTIALRADMDA 80 (392)
T ss_pred HHHHH-hhh--HHHHHHHHHHhhCCccchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCCCCEEEEEeeccc
Confidence 34455 444 899999999999999999999999999999999999944333 368999999865 4679999999999
Q ss_pred CCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCccchHHHHHcccccc-cceEE
Q 013076 122 LPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK-VNAIF 200 (450)
Q Consensus 122 Vp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~~Ga~~l~~~~~~~~-~d~~i 200 (450)
+|..+..++||.++.+|++|+||||++.+++|+++++|++...+++++|+|+|+|.||++.|++.|+++|.+++ +|+++
T Consensus 81 LPi~E~t~~~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v~ 160 (392)
T COG1473 81 LPIQEETGLPFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAVF 160 (392)
T ss_pred CccccccCCCcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEEE
Confidence 99999999999999999999999999999999999999988668999999999999997769999999998888 99999
Q ss_pred EeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEe
Q 013076 201 GLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQ 280 (450)
Q Consensus 201 ~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~ 280 (450)
++|++|..|.|.+.++.|....+...++|+++|+++|++.|+.++||+..++.++..|+.+.+|..++.....++++.++
T Consensus 161 g~H~~p~~~~g~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~ 240 (392)
T COG1473 161 GLHPGPGLPVGTVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIE 240 (392)
T ss_pred EecCCCCCCCceEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEec
Confidence 99998877899999999988888999999999999999999999999999999999999999999888888999999999
Q ss_pred cCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhh
Q 013076 281 GGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDM 360 (450)
Q Consensus 281 gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 360 (450)
||.+.||||+++++..++|....+..+.+.++|+++++.++..+++++++.+ ...+|+..+|+.+.+.+++++++.
T Consensus 241 aG~a~NVIpd~A~l~gtvR~~~~~~~~~~~~~i~~ia~g~a~~~g~~~ei~~----~~~~p~~~Nd~~~~~~~~~~~~~~ 316 (392)
T COG1473 241 AGTAANVIPDSAELEGTIRTFSDEVREKLEARIERIAKGIAAAYGAEAEIDY----ERGYPPVVNDPALTDLLAEAAEEV 316 (392)
T ss_pred CCCcCCcCCCeeEEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe----cCCCCCccCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999 788899999999999999999999
Q ss_pred cCCccc-c-ccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 361 LDTQKV-K-VMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 361 ~g~~~~-~-~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
.|...+ . ....+.|++|+++|.+.+|.+++++|..... +.....|+|...++.+.+..+++++..++..++.
T Consensus 317 ~~~~~~~~~~~~~~~gsEDf~~~~~~~Pg~~~~lG~~~~~-~~~~~~H~p~~~~de~~l~~g~~~~~~~~~~~~~ 390 (392)
T COG1473 317 GGEEVVVVELPPSMAGSEDFGYYLEKVPGAFFFLGTGSAD-GGTYPLHHPKFDFDEAALATGVKLLAALALLYLA 390 (392)
T ss_pred ccccceecccCCCCCccchHHHHHHhCCeeEEEeecCcCC-CCcccccCCcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 764322 1 2223459999999999999999999977532 1134599999999999999999999999998875
No 5
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=6.3e-56 Score=441.47 Aligned_cols=356 Identities=20% Similarity=0.271 Sum_probs=297.2
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecc---cCCceEEEEEcCCCCceEEEEeeccCCCCcCcCCCc
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP---VAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWE 131 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~---~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~ 131 (450)
+++++++++|++|||+|++|.++++||.++|+++||+++.. ++++|+++++++++ |+|+|+|||||||+++...|.
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~g~~~-~~il~~~H~DtVp~~~~~~w~ 80 (377)
T PRK08588 2 EEKIQILADIVKINSVNDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEIGSGS-PVLALSGHMDVVAAGDVDKWT 80 (377)
T ss_pred hHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEeCCCC-ceEEEEeeecccCCCCcccCc
Confidence 56899999999999999999999999999999999998752 35689999996544 899999999999998777895
Q ss_pred ---cc-cCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEec
Q 013076 132 ---YK-SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLH 203 (450)
Q Consensus 132 ---~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~ 203 (450)
|. .++||+|||||+ ||+++++|.|+++|++.+..++++|.|+|++||| ++.|++++++++.+.++|++++..
T Consensus 81 ~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~~~~~~~~~d~~i~~e 160 (377)
T PRK08588 81 YDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLTEKGYADDLDALIIGE 160 (377)
T ss_pred CCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHHhcCccCCCCEEEEec
Confidence 54 357899999998 8999999999999999887888999999999999 678999999998776778776532
Q ss_pred cCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhccc---CCCCCCceEEEEEEe
Q 013076 204 VDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRE---ADPLDSQVVTVAKFQ 280 (450)
Q Consensus 204 ~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~---~~~~~~~t~~i~~i~ 280 (450)
|.. ..+. ..++|..+++|+++|+++|+|.|+.|.|||..+++++.+++++..+. .+..+.++++++.|+
T Consensus 161 --p~~--~~i~----~~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~ 232 (377)
T PRK08588 161 --PSG--HGIV----YAHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIIN 232 (377)
T ss_pred --CCC--ceeE----EEEEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEe
Confidence 221 1222 23579999999999999999999999999999999999998874321 223457899999999
Q ss_pred cCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCcc--CChHHHHHHHHHHH
Q 013076 281 GGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTI--NNNDLHKYFQTVAG 358 (450)
Q Consensus 281 gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~d~~~~~~~~~~~~ 358 (450)
||...|+||++|++.+|+|+.|+++.+++.++|+++++......++++++++. ..++++. .|+++++.++++++
T Consensus 233 gG~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~l~~~~~~~~~ 308 (377)
T PRK08588 233 GGEQVNSVPDEAELEFNIRTIPEYDNDQVISLLQEIINEVNQNGAAQLSLDIY----SNHRPVASDKDSKLVQLAKDVAK 308 (377)
T ss_pred CCCcCCcCCCeEEEEEEeccCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEe----cCCCCcCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998876555666777652 2333433 36789999999999
Q ss_pred hhcCCccccccCCCcccchHHHHhhh---cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 359 DMLDTQKVKVMAPVMGSEDFSFYQEV---MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 359 ~~~g~~~~~~~~~~~g~tD~~~~~~~---~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
+.+|.++ .....+|++|+++|... +|++ .+||+ +...+|++||+++++++.+++++|..++.+++
T Consensus 309 ~~~g~~~--~~~~~~g~tD~~~~~~~~~~ip~i--~~Gpg-----~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 376 (377)
T PRK08588 309 SYVGQDI--PLSAIPGATDASSFLKKKPDFPVI--IFGPG-----NNLTAHQVDEYVEKDMYLKFIDIYKEIIIQYL 376 (377)
T ss_pred HhhCCCC--ceecCCCcccHHHHhhhcCCCCEE--EECCC-----CCccCCCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 9888765 24567899999999853 5654 46754 23569999999999999999999999999886
No 6
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.9e-54 Score=435.56 Aligned_cols=368 Identities=14% Similarity=0.181 Sum_probs=294.6
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhHcCCCCC--c-chHHHHHHHHHHHHhcCCceeccc-----------CCceEEEEEcCC
Q 013076 43 KLLNFAKRQELVGWMIGIRRKIHQNPELG--Y-QEFETSQLIRSELDKMGIKYKHPV-----------AVTGVVGFIGTG 108 (450)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~l~~l~~ips~s--~-~e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nvva~~~~~ 108 (450)
++.+++++++ +++++++++|++|||++ + +|+++++||+++|+++||+++... .++|++|+++++
T Consensus 4 ~~~~~~~~~~--~~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g~ 81 (427)
T PRK13013 4 RLFAAIEARR--DDLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQGA 81 (427)
T ss_pred HHHHHHHHhH--HHHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecCC
Confidence 5778888887 99999999999999987 3 568999999999999999987531 146999999654
Q ss_pred -CCceEEEEeeccCCCCcCcCCC---cccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-
Q 013076 109 -EPPFVALRADMDSLPLQEMVEW---EYKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE- 179 (450)
Q Consensus 109 -~~~~ill~~H~DvVp~~~~~~w---~~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE- 179 (450)
++|+|+|+||+||||+++ .| ||.. ++||+|||||+ ||+++++|+|+++|++.+.+++++|.|+|++|||
T Consensus 82 ~~~~~i~l~gH~DvVp~~~--~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~ 159 (427)
T PRK13013 82 RDGDCVHFNSHHDVVEVGH--GWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEES 159 (427)
T ss_pred CCCCEEEEEeccccCCCCC--CCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEecccc
Confidence 458999999999999874 57 5653 56899999998 9999999999999999887888999999999999
Q ss_pred Cc-cchHHHHHccccc--ccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHH
Q 013076 180 GG-GGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIV 256 (450)
Q Consensus 180 g~-~Ga~~l~~~~~~~--~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~ 256 (450)
++ .|.+++++++.+. ++|+++.. + |++...+ ...++|..+++|+++|+++|++.|+.|+|||..++++|.
T Consensus 160 g~~~g~~~l~~~~~~~~~~~d~~i~~--e---p~~~~~i--~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l~ 232 (427)
T PRK13013 160 GGFGGVAYLAEQGRFSPDRVQHVIIP--E---PLNKDRI--CLGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLA 232 (427)
T ss_pred CChhHHHHHHhcCCccccCCCEEEEe--c---CCCCCce--EEeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHHH
Confidence 55 4778888877655 45777753 2 2331111 123679999999999999999999999999999999999
Q ss_pred HHhhhhcc-----cC------CCCCCceEEEEEEecCCCC----------CCCCCeEEEEEEEecCChhhHHHHHHHHHH
Q 013076 257 SLQHLVSR-----EA------DPLDSQVVTVAKFQGGGAF----------NVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (450)
Q Consensus 257 ~l~~~~~~-----~~------~~~~~~t~~i~~i~gG~~~----------nviP~~a~~~idiR~~~~~~~~~~~~~i~~ 315 (450)
+|+++..+ .. +....+++|++.|+||... |+||++|++++|+|++|+++.++++++|++
T Consensus 233 ~l~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~ 312 (427)
T PRK13013 233 EIEERLFPLLATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITA 312 (427)
T ss_pred HHHHHhhhhhhcccccCCCCCcccCCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHH
Confidence 99765311 00 0123579999999999766 999999999999999999999999999999
Q ss_pred HHHHHHHhh-CCeEEEEeeccCCCCCCCcc--CChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh--cCeEEE
Q 013076 316 VIIGQAAVQ-RCSATVDFLSKEKPFFPPTI--NNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV--MPGYFF 390 (450)
Q Consensus 316 ~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--~p~~~~ 390 (450)
++++.+... +++++++. ...++++. .|+++++.+.+++++.+|.++ ....++|++|++++.+. +|.+ +
T Consensus 313 ~i~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~lv~~l~~a~~~~~g~~~--~~~~~~g~~D~~~~~~~g~~~~~-v 385 (427)
T PRK13013 313 LLERLKRARPGFAYEIRD----LFEVLPTMTDRDAPVVRSVAAAIERVLGRQA--DYVVSPGTYDQKHIDRIGKLKNC-I 385 (427)
T ss_pred HHHHHHhhCCCceeEEEE----cccCCcccCCCCCHHHHHHHHHHHHhhCCCC--ceeecCccCCHHHHHhcCCCCCE-E
Confidence 998765432 44555543 22334443 356899999999999878765 34467889999999886 3322 2
Q ss_pred EecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 391 FLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 391 ~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
.|||+ ....+|++|||+++++|.+++++|+.++.++++
T Consensus 386 ~fGPg-----~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~~~~ 423 (427)
T PRK13013 386 AYGPG-----ILDLAHQPDEWVGIADMVDSAKVMALVLADLLA 423 (427)
T ss_pred EECCC-----CccccCCCCceeEHHHHHHHHHHHHHHHHHHhc
Confidence 57754 346799999999999999999999999999986
No 7
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=1.6e-53 Score=427.60 Aligned_cols=367 Identities=19% Similarity=0.218 Sum_probs=299.9
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcchH---HHHHHHHHHHHhcCCceeccc----CCceEEEEEcCCCCceE
Q 013076 41 PKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEF---ETSQLIRSELDKMGIKYKHPV----AVTGVVGFIGTGEPPFV 113 (450)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~---~~~~~l~~~l~~~G~~~~~~~----~~~nvva~~~~~~~~~i 113 (450)
.+++.++++.+. +++++++++|++|||++++|. ++++||+++|+++||++++.. .++||+++++++++|+|
T Consensus 25 ~~~~~~~~~~~~--~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~~~~~i 102 (410)
T PRK06133 25 DAELLAAAQQEQ--PAYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGTGKRRI 102 (410)
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCCCCceE
Confidence 467899999988 999999999999999998754 799999999999999987532 35799999966545899
Q ss_pred EEEeeccCCCCcCcCCCcccc--CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHH
Q 013076 114 ALRADMDSLPLQEMVEWEYKS--KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKV 187 (450)
Q Consensus 114 ll~~H~DvVp~~~~~~w~~~~--~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l 187 (450)
+|+|||||||++. .|.+.+ .++|++||||+ |++++++|+|+++|++.+.+++++|.|+|++||| ++.|++.+
T Consensus 103 ll~~H~D~Vp~~~--~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~ 180 (410)
T PRK06133 103 MLIAHMDTVYLPG--MLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSREL 180 (410)
T ss_pred EEEeecCccCCCC--ccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHHH
Confidence 9999999999853 474332 56899999997 8999999999999998877778999999999999 67899999
Q ss_pred HHcccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHhhhhcccC
Q 013076 188 LEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQHSIDPILAASNVIVSLQHLVSREA 266 (450)
Q Consensus 188 ~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~~g~nAi~~~~~~l~~l~~~~~~~~ 266 (450)
+++.. .+.|++|+.+ |+.+.+.+.. .++|..+++|+++|+++|++ .|+.|.|||..+++++..|+++..
T Consensus 181 ~~~~~-~~~d~~i~~e--p~~~~~~v~~----~~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~~--- 250 (410)
T PRK06133 181 IAELA-AQHDVVFSCE--PGRAKDALTL----ATSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLGD--- 250 (410)
T ss_pred HHHHh-ccCCEEEEeC--CCCCCCCEEE----eccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhccC---
Confidence 97643 3568888764 3333333432 35799999999999999986 799999999999999999988642
Q ss_pred CCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccC-
Q 013076 267 DPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTIN- 345 (450)
Q Consensus 267 ~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~- 345 (450)
.....+++++.|+||...|+||++|++.+|+|+.|.++.+++.++|++++++ ....+++++++. ...+|++..
T Consensus 251 -~~~~~t~~~~~i~gG~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~ 324 (410)
T PRK06133 251 -PAKGTTLNWTVAKAGTNRNVIPASASAQADVRYLDPAEFDRLEADLQEKVKN-KLVPDTEVTLRF----ERGRPPLEAN 324 (410)
T ss_pred -CCCCeEEEeeEEECCCCCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHhc-cCCCCeEEEEEe----ccccCCcccC
Confidence 2245689999999999999999999999999999999999999999999986 334466666655 234455433
Q ss_pred --ChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHH
Q 013076 346 --NNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAA 422 (450)
Q Consensus 346 --d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~ 422 (450)
+.++++.+++++++. |.++...+...+|++|++++... +|++++++|+.. ..+|++||+|+++++.++++
T Consensus 325 ~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~g~tDa~~~~~~gip~v~~g~G~~~------~~aH~~nE~i~i~~~~~~~~ 397 (410)
T PRK06133 325 AASRALAEHAQGIYGEL-GRRLEPIDMGTGGGTDAAFAAGSGKAAVLEGFGLVG------FGAHSNDEYIELNSIVPRLY 397 (410)
T ss_pred cchHHHHHHHHHHHHHc-CCCccccccCCCCCchHHHHHhcCCCceEecccCCC------CCCCCCCcEEEcccHHHHHH
Confidence 346888888887765 65532112467899999999887 888888888643 45999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 013076 423 LHASLALRYLLE 434 (450)
Q Consensus 423 ~~~~~~~~l~~~ 434 (450)
+|..++.+++++
T Consensus 398 ~~~~~~~~~~~~ 409 (410)
T PRK06133 398 LLTRMIMELSRD 409 (410)
T ss_pred HHHHHHHHhhcC
Confidence 999999999864
No 8
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=1.4e-53 Score=421.97 Aligned_cols=356 Identities=46% Similarity=0.776 Sum_probs=297.2
Q ss_pred HHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceec-ccCCceEEEEEcCC-CCceEEEEeeccCCCCcCcCCCccccC
Q 013076 58 IGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKH-PVAVTGVVGFIGTG-EPPFVALRADMDSLPLQEMVEWEYKSK 135 (450)
Q Consensus 58 ~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~-~~~~~nvva~~~~~-~~~~ill~~H~DvVp~~~~~~w~~~~~ 135 (450)
.+++++|++|||+|++|.++++||.++|+++|+++++ .....|++++++++ ++|+|+|+|||||||+++...+||...
T Consensus 2 ~~~~~~L~~ips~s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~~~~~i~l~gH~DtVp~~~~~~~pf~~~ 81 (363)
T TIGR01891 2 TDIRRHLHEHPELSFEEFKTSSLIAEALESLGIEVRRGVGGATGVVATIGGGKPGPVVALRADMDALPIQEQTDLPYKST 81 (363)
T ss_pred hHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCCCCCEEEEEeccCCCCcccccCCCcccC
Confidence 5789999999999999999999999999999999886 34568899999764 468999999999999876555688766
Q ss_pred CCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCccchHHHHHcccccccceEEEeccCCCCCCceEEe
Q 013076 136 IPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVAS 215 (450)
Q Consensus 136 ~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~ 215 (450)
+||++||||+|++++++++|+..|++.+..++++|.|+|++|||.+.|++++++++.+++.|+++++++++..+.+.+..
T Consensus 82 ~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~~~ 161 (363)
T TIGR01891 82 NPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDVDAILGLHPDPSIPAGTVGL 161 (363)
T ss_pred CCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCcCEEEEECCCCCCCCeEEEE
Confidence 78999999999999999999999988766788999999999999668999999888767778888887766566676656
Q ss_pred ecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEE
Q 013076 216 RPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIG 295 (450)
Q Consensus 216 ~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~ 295 (450)
..+..++|..+++|+++|+++|++.|+.|+||+..+++++.+++++.....+.....++|++.|+||...|+||++|++.
T Consensus 162 ~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~nvvP~~~~~~ 241 (363)
T TIGR01891 162 RPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTVGIIEAGGAPNVIPDKASMS 241 (363)
T ss_pred CCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEEEcCCCCcEECCeeEEE
Confidence 66777889999999999999999999999999999999999998875333233345789999999999999999999999
Q ss_pred EEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccc-cccCCCcc
Q 013076 296 GTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKV-KVMAPVMG 374 (450)
Q Consensus 296 idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~-~~~~~~~g 374 (450)
+|+|+.|+++.+++.++|++.++..+...+.+++++.. ..+|+...|+++++.+++++++++|..+. ..+..++|
T Consensus 242 ~diR~~~~~~~e~~~~~i~~~~~~~~~~~~~~ve~~~~----~~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~~~~~~g 317 (363)
T TIGR01891 242 GTVRSLDPEVRDQIIDRIERIVEGAAAMYGAKVELNYD----RGLPAVTNDPALTQILKEVARHVVGPENVAEDPEVTMG 317 (363)
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe----cCCCCccCCHHHHHHHHHHHHHhcCccceeccCCCCcc
Confidence 99999999999999999999999887777888888762 24444556788999999999997785432 12346789
Q ss_pred cchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCcc
Q 013076 375 SEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDAL 417 (450)
Q Consensus 375 ~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l 417 (450)
++|++++++.+|++++++|....+.++....|+++..++.+-+
T Consensus 318 g~Da~~~~~~~P~~~~f~~~~~~~~~~~~~~h~~~~~~~~~~~ 360 (363)
T TIGR01891 318 SEDFAYYSQKVPGAFFFLGIGNEGTGLSHPLHHPRFDIDEEAL 360 (363)
T ss_pred ccCHHHHHHhCCeeEEEEecCCCCCCCCCCCCCCCCcCChHHh
Confidence 9999999988999988887664211123578999877765543
No 9
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-53 Score=427.48 Aligned_cols=364 Identities=20% Similarity=0.218 Sum_probs=297.0
Q ss_pred hhHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcch---HHHHHHHHHHHHhcCCceeccc-----------------CCc
Q 013076 40 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQE---FETSQLIRSELDKMGIKYKHPV-----------------AVT 99 (450)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e---~~~~~~l~~~l~~~G~~~~~~~-----------------~~~ 99 (450)
...++.++++++. ++++++|++|++|||+++++ .++++||+++|+++||+++... ..+
T Consensus 4 ~~~~~~~~~~~~~--~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (402)
T PRK07338 4 EERAVLDLIDDRQ--APMLEQLIAWAAINSGSRNLDGLARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGP 81 (402)
T ss_pred HHHHHHHHHhhhH--HHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCC
Confidence 4567888999887 99999999999999999774 5799999999999999887421 126
Q ss_pred eEEEEEcCCCCceEEEEeeccCCCCcCcCCCcccc---CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEE
Q 013076 100 GVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKS---KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLV 173 (450)
Q Consensus 100 nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~~~~---~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~ 173 (450)
||+|+++++.+++|+|+|||||||++. .||.. ++||++||||+ ||+++++|+|+++|++.+.+++++|.|+
T Consensus 82 nl~a~~~~~~~~~lll~gH~DvVp~~~---~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~ 158 (402)
T PRK07338 82 ALHVSVRPEAPRQVLLTGHMDTVFPAD---HPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVL 158 (402)
T ss_pred eEEEEECCCCCccEEEEeecCccCCCC---CcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEE
Confidence 999999654336899999999999853 57764 57899999998 9999999999999998877788999999
Q ss_pred EecCCC-CccchHHHHHcccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCC-CCCCCcHHHHH
Q 013076 174 FQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAI-PQHSIDPILAA 251 (450)
Q Consensus 174 ~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~-p~~g~nAi~~~ 251 (450)
|++||| |+.|++.+++++. .+.++++.. +|..+.+.+.. .++|..+++|+++|+++|+|. |+.|.|||..+
T Consensus 159 ~~~dEE~g~~g~~~~~~~~~-~~~~~~i~~--ep~~~~~~v~~----~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~ 231 (402)
T PRK07338 159 INPDEEIGSPASAPLLAELA-RGKHAALTY--EPALPDGTLAG----ARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAA 231 (402)
T ss_pred EECCcccCChhhHHHHHHHh-ccCcEEEEe--cCCCCCCcEEe----ecceeEEEEEEEEeEcccCCCCcccCccHHHHH
Confidence 999999 7789999988754 345666654 34333444432 357999999999999999995 89999999999
Q ss_pred HHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEE
Q 013076 252 SNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVD 331 (450)
Q Consensus 252 ~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~ 331 (450)
++++.+|+++... ....++|++.|+||...|+||++|++.+|+|+.|+++.+++.++|++++++.+..++++++++
T Consensus 232 ~~~i~~l~~l~~~----~~~~t~~vg~i~gG~~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~ 307 (402)
T PRK07338 232 AELALALHALNGQ----RDGVTVNVAKIDGGGPLNVVPDNAVLRFNIRPPTPEDAAWAEAELKKLIAQVNQRHGVSLHLH 307 (402)
T ss_pred HHHHHHHHhhhcc----CCCcEEEEEEEecCCCCceeccccEEEEEeccCCHHHHHHHHHHHHHHHhccccCCCeEEEEE
Confidence 9999999887532 234689999999999999999999999999999999999999999999988755556666554
Q ss_pred eeccCCCCCCCc---cCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCC
Q 013076 332 FLSKEKPFFPPT---INNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHS 407 (450)
Q Consensus 332 ~~~~~~~~~~~~---~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~ 407 (450)
. ...+|++ ..++++++.++++.++. |.++ ....++|++|++++... +|++. ++||+. ..+|+
T Consensus 308 ~----~~~~~p~~~~~~~~~l~~~~~~~~~~~-g~~~--~~~~~~g~tDa~~~~~~giP~v~-~~Gpg~------~~~H~ 373 (402)
T PRK07338 308 G----GFGRPPKPIDAAQQRLFEAVQACGAAL-GLTI--DWKDSGGVCDGNNLAAAGLPVVD-TLGVRG------GNIHS 373 (402)
T ss_pred c----cccCCCCCCCcchHHHHHHHHHHHHHc-CCCc--ccccCCccchHHHHhhcCCCeEe-ccCCCC------CCCCC
Confidence 3 1223333 23457999999988775 8765 34568899999999877 89874 466542 45899
Q ss_pred CCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 408 PYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 408 ~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
+|||++++++.+++++|+.++.+|.+
T Consensus 374 ~~E~v~i~~l~~~~~~~~~~l~~~~~ 399 (402)
T PRK07338 374 EDEFVILDSLVERAQLSALILMRLAQ 399 (402)
T ss_pred ccceEehhhHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999864
No 10
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=5.2e-53 Score=426.27 Aligned_cols=371 Identities=15% Similarity=0.158 Sum_probs=300.5
Q ss_pred hhHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecc--------------------cCCc
Q 013076 40 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP--------------------VAVT 99 (450)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--------------------~~~~ 99 (450)
..+++.++++... +++++++++|++|||+|++|.++++||+++|+++|+++++. ++++
T Consensus 7 ~~~~~~~~i~~~~--~~~~~~l~~li~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (427)
T PRK06837 7 LTQRILAAVDAGF--DAQVAFTQDLVRFPSTRGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGAP 84 (427)
T ss_pred HHHHHHHHHHhhh--HHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCCc
Confidence 5678899999987 99999999999999999999999999999999999987641 2468
Q ss_pred eEEEEEcCC-C-CceEEEEeeccCCCCcCcCCCc---ccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceE
Q 013076 100 GVVGFIGTG-E-PPFVALRADMDSLPLQEMVEWE---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTV 170 (450)
Q Consensus 100 nvva~~~~~-~-~~~ill~~H~DvVp~~~~~~w~---~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i 170 (450)
||++++++. + +|+|+|+|||||||+++.+.|+ |.. ++||+|||||+ ||+++++|.|++++++.+.+++++|
T Consensus 85 nl~a~~~g~~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i 164 (427)
T PRK06837 85 NVVGTYRPAGKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARV 164 (427)
T ss_pred eEEEEecCCCCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcE
Confidence 999999653 2 5899999999999998777884 543 46899999998 8999999999999999887889999
Q ss_pred EEEEecCCC-CccchHHHHHcccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHH
Q 013076 171 VLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPIL 249 (450)
Q Consensus 171 ~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~ 249 (450)
.|+|++||| ++.|+..++..+. ..|++|.. + |++.. ...+++|..+++|+++|+++|+|.|+.|.||+.
T Consensus 165 ~~~~~~dEE~~g~g~~~~~~~~~--~~d~~iv~--e---p~~~~---i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~ 234 (427)
T PRK06837 165 HFQSVIEEESTGNGALSTLQRGY--RADACLIP--E---PTGEK---LVRAQVGVIWFRLRVRGAPVHVREAGTGANAID 234 (427)
T ss_pred EEEEEeccccCCHhHHHHHhcCc--CCCEEEEc--C---CCCCc---cccccceeEEEEEEEEeeccccCCcccCcCHHH
Confidence 999999999 7778888887764 46777653 2 33321 113467999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhccc-----C-----CCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 013076 250 AASNVIVSLQHLVSRE-----A-----DPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIG 319 (450)
Q Consensus 250 ~~~~~l~~l~~~~~~~-----~-----~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~ 319 (450)
.+++++.+|+++.... . +.....++|++.|+||...|+||++|++.+++|+.|+++.+++.++|++.+++
T Consensus 235 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~gG~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~~~~~ 314 (427)
T PRK06837 235 AAYHLIQALRELEAEWNARKASDPHFEDVPHPINFNVGIIKGGDWASSVPAWCDLDCRIAIYPGVTAADAQAEIEACLAA 314 (427)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeCCCCCCccCCEEEEEEEEeECCCCCHHHHHHHHHHHHHH
Confidence 9999999998774211 0 01234589999999999999999999999999999999999999999999987
Q ss_pred HHHhh----CCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhh-h-cCeEEEEec
Q 013076 320 QAAVQ----RCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQE-V-MPGYFFFLG 393 (450)
Q Consensus 320 ~~~~~----~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~-~p~~~~~~G 393 (450)
..... +...++++.....+++ ....|+++++.+++++++.+|.++ .+...+|++|++++.+ . +|++. ||
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~a~~~~~g~~~--~~~~~~g~tDa~~~~~~~gip~v~--~G 389 (427)
T PRK06837 315 AARDDRFLSNNPPEVVWSGFLAEGY-VLEPGSEAEAALARAHAAVFGGPL--RSFVTTAYTDTRFYGLYYGIPALC--YG 389 (427)
T ss_pred HHhcChhhhhCCCeEEEEecccCCc-CCCCCCHHHHHHHHHHHHHhCCCC--eeeEEeeccchHHHhccCCCCEEE--EC
Confidence 54321 2223444311001222 223467899999999999878765 3456789999999985 3 89765 67
Q ss_pred ccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 394 MKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 394 ~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
|+. ..+|++||+|+++++.+++++|+.++..++.
T Consensus 390 p~~------~~~H~~nE~i~i~~l~~~~~~~~~~l~~~~~ 423 (427)
T PRK06837 390 PSG------EGIHGFDERVDLESVRKVTKTIALFVAEWCG 423 (427)
T ss_pred CCC------CccCCCCceEEHHHHHHHHHHHHHHHHHHhC
Confidence 543 3599999999999999999999999999985
No 11
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2.3e-52 Score=415.71 Aligned_cols=355 Identities=19% Similarity=0.250 Sum_probs=286.5
Q ss_pred HHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecc--cCCceEEEEEcCCCCceEEEEeeccCCCCcCcCCCc--
Q 013076 56 WMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP--VAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWE-- 131 (450)
Q Consensus 56 ~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~-- 131 (450)
++++++++|++|||++++|.++++||.++|+++||+++.. .+.+|+++++++ ++|+|+|+||+||||+++...|+
T Consensus 3 ~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~g~-~~~~i~l~~H~D~Vp~g~~~~w~~~ 81 (375)
T PRK13009 3 DVLELAQDLIRRPSVTPDDAGCQDLLAERLEALGFTCERMDFGDVKNLWARRGT-EGPHLCFAGHTDVVPPGDLEAWTSP 81 (375)
T ss_pred hHHHHHHHHhCCCCCCCchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEEEecC-CCCEEEEEeecccCCCCCcccCCCC
Confidence 5789999999999999999999999999999999998742 346899999844 45999999999999998777894
Q ss_pred -ccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-c-cchHHHHHcccc--cccceEEEe
Q 013076 132 -YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG-G-GGAHKVLEAGVL--EKVNAIFGL 202 (450)
Q Consensus 132 -~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg-~-~Ga~~l~~~~~~--~~~d~~i~~ 202 (450)
|.. ++||++||||+ ||+++++|.|++++++.+..++++|.|+|++|||+ + .|++.+++.... ..+|+++..
T Consensus 82 Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ 161 (375)
T PRK13009 82 PFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVG 161 (375)
T ss_pred CCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCCCEEEEc
Confidence 543 46899999998 89999999999999988777889999999999994 4 599988764221 246777654
Q ss_pred ccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccC-CCCCCceEEEEEEec
Q 013076 203 HVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREA-DPLDSQVVTVAKFQG 281 (450)
Q Consensus 203 ~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~-~~~~~~t~~i~~i~g 281 (450)
++......+.. ....++|..+++|+++|+++|++.|+.|.||+..+++++.+|+.+..+.. ..+...+++++.|+|
T Consensus 162 ep~~~~~~~~~---i~~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~~ 238 (375)
T PRK13009 162 EPTSTERLGDV---IKNGRRGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNIDA 238 (375)
T ss_pred CCCcccCCCCe---EEEecceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEec
Confidence 32211111111 12235799999999999999999999999999999999999987643222 234456899999998
Q ss_pred CC-CCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccC-ChHHHHHHHHHHHh
Q 013076 282 GG-AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTIN-NNDLHKYFQTVAGD 359 (450)
Q Consensus 282 G~-~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~ 359 (450)
|. ..|+||++|++.+|+|++|.++.+++.++|++.++. .++++++++. ...+++.. ++++++.+++++++
T Consensus 239 G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~~~~~----~~~~~~~~~~----~~~~p~~~~~~~~~~~l~~a~~~ 310 (375)
T PRK13009 239 GTGATNVIPGELEAQFNFRFSTEHTAESLKARVEAILDK----HGLDYTLEWT----LSGEPFLTPPGKLVDAVVAAIEA 310 (375)
T ss_pred CCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHHHHHHh----cCCCeEEEEe----cCCCcccCCCcHHHHHHHHHHHH
Confidence 86 789999999999999999999999999999999873 3566776652 23333332 37899999999999
Q ss_pred hcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 360 MLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 360 ~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
.+|.++. +...+|++|++++.+. +|++. |||.. ..+|++||+|+++++.+++++|..++.+|+
T Consensus 311 ~~g~~~~--~~~~~g~tda~~~~~~g~p~v~--~Gp~~------~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 374 (375)
T PRK13009 311 VTGITPE--LSTSGGTSDARFIADYGAQVVE--FGPVN------ATIHKVNECVSVADLEKLTRIYERILERLL 374 (375)
T ss_pred HhCCCce--eeccCCCccHHHHHHcCCCeEE--eccCc------ccCCCCCCcEEHHHHHHHHHHHHHHHHHHh
Confidence 8888763 4567889999999886 78654 66543 359999999999999999999999999886
No 12
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=3.1e-52 Score=419.90 Aligned_cols=371 Identities=18% Similarity=0.179 Sum_probs=294.6
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhHcCCCCC---cchHHHHHHHHHHHHhcCCceecc---cCCceEEEEEcCC-C--CceE
Q 013076 43 KLLNFAKRQELVGWMIGIRRKIHQNPELG---YQEFETSQLIRSELDKMGIKYKHP---VAVTGVVGFIGTG-E--PPFV 113 (450)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~l~~l~~ips~s---~~e~~~~~~l~~~l~~~G~~~~~~---~~~~nvva~~~~~-~--~~~i 113 (450)
++.++++... +++++++++|++|||++ ++|+++++||+++|+++||++++. ++++|+++++++. + +|+|
T Consensus 3 ~~~~~i~~~~--~~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~l 80 (421)
T PRK08596 3 QLLEQIELRK--DELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSL 80 (421)
T ss_pred HHHHHHHhhH--HHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEE
Confidence 3667888776 88999999999999998 478889999999999999998752 3578999999543 2 3689
Q ss_pred EEEeeccCCCCcCcCCCc---ccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchH
Q 013076 114 ALRADMDSLPLQEMVEWE---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAH 185 (450)
Q Consensus 114 ll~~H~DvVp~~~~~~w~---~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~ 185 (450)
+|+|||||||+++..+|+ |.. ++||+|||||+ ||+++++|+|+++|++.+..++++|.|+|++||| ++.|++
T Consensus 81 ll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~ 160 (421)
T PRK08596 81 IINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTL 160 (421)
T ss_pred EEeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHH
Confidence 999999999998877795 443 56899999998 8999999999999999888889999999999999 778999
Q ss_pred HHHHcccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEec----------CCCCCCCCCCCcHHHHHHHHH
Q 013076 186 KVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGK----------GGHAAIPQHSIDPILAASNVI 255 (450)
Q Consensus 186 ~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~----------~~Hss~p~~g~nAi~~~~~~l 255 (450)
++++++. .+|++++.. | ++.. ..+++|..++.++++|. ++|++.|+.|.|||..+++++
T Consensus 161 ~~~~~~~--~~d~~i~~e--p---~~~~----~~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i 229 (421)
T PRK08596 161 QCCERGY--DADFAVVVD--T---SDLH----MQGQGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKII 229 (421)
T ss_pred HHHhcCC--CCCEEEECC--C---CCCc----cccccceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHH
Confidence 9998864 357777642 3 2211 12356877777777775 479999999999999999999
Q ss_pred HHHhhhhcc-----cCC--CCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhh----
Q 013076 256 VSLQHLVSR-----EAD--PLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQ---- 324 (450)
Q Consensus 256 ~~l~~~~~~-----~~~--~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~---- 324 (450)
.+|+++... ... .....++|++.|+||...|+||++|++.+|+|++|+++.+++.++|+++++......
T Consensus 230 ~~l~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~ 309 (421)
T PRK08596 230 QSLQELERHWAVMKSYPGFPPGTNTINPAVIEGGRHAAFIADECRLWITVHFYPNETYEQVIKEIEEYIGKVAAADPWLR 309 (421)
T ss_pred HHHHHHHHHHhhcccCccCCCCCcceeeeeeeCCCCCCccCceEEEEEEeeeCCCCCHHHHHHHHHHHHHHHHhcChhhh
Confidence 999886421 111 124579999999999999999999999999999999999999999999998753211
Q ss_pred CCeEEEEeec-----cCCCCCCCc--cCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccC
Q 013076 325 RCSATVDFLS-----KEKPFFPPT--INNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKN 396 (450)
Q Consensus 325 ~~~~~i~~~~-----~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~ 396 (450)
...+++++.. .....+|++ +.|+++++.+.+++++.+|.++ .+...+|+||++++... +|++. +||+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~~~--~~~~~~g~tD~~~~~~~gip~v~--~Gpg- 384 (421)
T PRK08596 310 ENPPQFKWGGESMIEDRGEIFPSLEIDSEHPAVKTLSSAHESVLSKNA--ILDMSTTVTDGGWFAEFGIPAVI--YGPG- 384 (421)
T ss_pred hCCceeEEecccccccccccCCCccCCCCchHHHHHHHHHHHHhCCCC--eeeEEeeecchhhhhhcCCCEEE--ECCC-
Confidence 0011221100 001123443 4567899999999999988866 34567889999999877 89876 4532
Q ss_pred CCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhhc
Q 013076 397 ETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEF 435 (450)
Q Consensus 397 ~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~ 435 (450)
....+|++||+++++++.+++++|..++.++|+.+
T Consensus 385 ----~~~~~H~~~E~v~i~~~~~~~~~~~~~l~~~~~~~ 419 (421)
T PRK08596 385 ----TLEEAHSVNEKVEIEQLIEYTKVITAFIYEWCHTK 419 (421)
T ss_pred ----cccccCCCCceEEHHHHHHHHHHHHHHHHHHhCCC
Confidence 33579999999999999999999999999999754
No 13
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=3e-52 Score=417.55 Aligned_cols=370 Identities=18% Similarity=0.208 Sum_probs=295.6
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccC
Q 013076 42 KKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDS 121 (450)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~Dv 121 (450)
+++.++++.++ +++++++++|++|||+|++|.++++||.++|+++||++...+..+|+++++++++ |+|+|++|+||
T Consensus 4 ~~~~~~~~~~~--~~~~~~l~~lv~ips~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~~-~~i~~~~H~Dt 80 (399)
T PRK13004 4 KLILMLAEKYK--ADMTRFLRDLIRIPSESGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHGK-KLIAFDAHIDT 80 (399)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEEEECCCC-cEEEEEeccCc
Confidence 56888999988 9999999999999999999999999999999999998654445679999997654 89999999999
Q ss_pred CCCcCcCCCcccc----CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-C-ccchHHHHHccc
Q 013076 122 LPLQEMVEWEYKS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-G-GGGAHKVLEAGV 192 (450)
Q Consensus 122 Vp~~~~~~w~~~~----~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g-~~Ga~~l~~~~~ 192 (450)
||+++..+|.+++ ++||++||||+ |++++++|+|+++|++.+..++++|.|+|++||| + +.|++++++++.
T Consensus 81 Vp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~~ 160 (399)
T PRK13004 81 VGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEEDK 160 (399)
T ss_pred cCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhcC
Confidence 9998777786543 46899999998 8999999999999999887789999999999999 3 467888888644
Q ss_pred ccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcc--cCCCCC
Q 013076 193 LEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSR--EADPLD 270 (450)
Q Consensus 193 ~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~--~~~~~~ 270 (450)
+ ++|++++.+ +. ...+. ..++|..+++|+++|+++|++.|+.|+|||..+++++.+|+++... .....+
T Consensus 161 ~-~~d~~i~~e--~~--~~~i~----~~~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~ 231 (399)
T PRK13004 161 I-KPDFVVITE--PT--DLNIY----RGQRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKEDPFLG 231 (399)
T ss_pred C-CCCEEEEcc--CC--CCceE----EecceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccccCCcCC
Confidence 3 468777643 22 12222 2357999999999999999999999999999999999999987543 222334
Q ss_pred CceEEEEEEecC-CCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeec---------cCCCCC
Q 013076 271 SQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLS---------KEKPFF 340 (450)
Q Consensus 271 ~~t~~i~~i~gG-~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~---------~~~~~~ 340 (450)
..+++++.|.+| .+.|+||++|++.+|+|++|+++.+++.++|+++++. ...+.++++.... .....+
T Consensus 232 ~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 309 (399)
T PRK13004 232 KGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRALPAV--KKANAKVSMYNYDRPSYTGLVYPTECYF 309 (399)
T ss_pred CceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHHHhh--ccccceEEEecccCCCcccccccccccc
Confidence 568999999876 5899999999999999999999999999999988432 1223333322100 001123
Q ss_pred CCc--cCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhh-h-cCeEEEEecccCCCCCCCCCCCCCCcccCCCc
Q 013076 341 PPT--INNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQE-V-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDA 416 (450)
Q Consensus 341 ~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~ 416 (450)
|++ +.|+++++.+++++++.+|.++. ....++++|++.+.+ . +|++. |||+ ....+|++||++++++
T Consensus 310 p~~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~~~td~~~~~~~~Gip~v~--~Gpg-----~~~~aH~~nE~i~i~~ 380 (399)
T PRK13004 310 PTWLYPEDHEFVKAAVEAYKGLFGKAPE--VDKWTFSTNGVSIAGRAGIPTIG--FGPG-----KEPLAHAPNEYTWKEQ 380 (399)
T ss_pred cccccCCCCHHHHHHHHHHHHHhCCCCe--ecccccccCCeEEehhcCCCEEE--ECCC-----cccccCCCCceeEHHH
Confidence 443 34788999999999998887663 345677888877754 4 89765 6643 3457999999999999
Q ss_pred cHHHHHHHHHHHHHHHhh
Q 013076 417 LPYGAALHASLALRYLLE 434 (450)
Q Consensus 417 l~~~~~~~~~~~~~l~~~ 434 (450)
+.+++++|..++.+||+.
T Consensus 381 l~~~~~~~~~~~~~~~~~ 398 (399)
T PRK13004 381 LVKAAAMYAAIPKSLLKK 398 (399)
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 999999999999999954
No 14
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-52 Score=420.52 Aligned_cols=360 Identities=20% Similarity=0.237 Sum_probs=290.1
Q ss_pred HHHHHHHHHhHcCCCCCc-----chHHHHHHHHHHHHhcCCc-eeccc-------C--CceEEEEEcCC-CCceEEEEee
Q 013076 55 GWMIGIRRKIHQNPELGY-----QEFETSQLIRSELDKMGIK-YKHPV-------A--VTGVVGFIGTG-EPPFVALRAD 118 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~-----~e~~~~~~l~~~l~~~G~~-~~~~~-------~--~~nvva~~~~~-~~~~ill~~H 118 (450)
+++++++++|++|||+++ +|.++++||.++|+++||+ +++.. + ++|++++++++ ++++|+|+||
T Consensus 5 ~~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~~~~lll~~H 84 (400)
T PRK13983 5 DEMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDGKRTLWIISH 84 (400)
T ss_pred HHHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCCCCeEEEEee
Confidence 789999999999999984 4889999999999999998 76421 1 58999999664 3479999999
Q ss_pred ccCCCCcCcCCCcc---cc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-cchHHHHH
Q 013076 119 MDSLPLQEMVEWEY---KS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG-GGAHKVLE 189 (450)
Q Consensus 119 ~DvVp~~~~~~w~~---~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~-~Ga~~l~~ 189 (450)
|||||+++.+.|++ .. +++|+|||||+ |++++++|.|+++|++.+.+++++|.|+|++||| |+ .|++++++
T Consensus 85 ~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~~~~ 164 (400)
T PRK13983 85 MDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQYLLK 164 (400)
T ss_pred ccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHHHHHh
Confidence 99999987778954 42 45899999997 8999999999999999888899999999999999 66 58999998
Q ss_pred c--ccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhh-hhccc-
Q 013076 190 A--GVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQH-LVSRE- 265 (450)
Q Consensus 190 ~--~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~-~~~~~- 265 (450)
. +.+.+.|++++. +.+.|++... ..+++|..+++|+++|+++|+|.|+.|+||+..+++++.++++ +....
T Consensus 165 ~~~~~~~~~d~~i~~--~~~~~~~~~i---~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~ 239 (400)
T PRK13983 165 KHPELFKKDDLILVP--DAGNPDGSFI---EIAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHEKFN 239 (400)
T ss_pred hcccccCCCCEEEEe--cCCCCCCcee---EEeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 6 545556777653 3345665421 1346799999999999999999999999999999999999987 42111
Q ss_pred -CCC---CCCceEEEEEEecC-CCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCC
Q 013076 266 -ADP---LDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFF 340 (450)
Q Consensus 266 -~~~---~~~~t~~i~~i~gG-~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~ 340 (450)
.++ ....+++++.+.+| ...|+||++|++++|+|++|+++.++++++|+++++..+...+.+++++.... ..+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~~~~~~~~~~~~~v~~~~~~~-~~~~ 318 (400)
T PRK13983 240 AKDPLFDPPYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKEIADEFEEEYGVKIEVEIVQR-EQAP 318 (400)
T ss_pred ccccccCCCCcccccceeecCCcCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhccccCcceeEEEeec-cCCc
Confidence 111 12346788888877 58999999999999999999999999999999999987666666676665210 1122
Q ss_pred CCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHH
Q 013076 341 PPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPY 419 (450)
Q Consensus 341 ~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~ 419 (450)
++...|+++++.+.+++++.+|.++. +..++|++|++++... +|++++ ||.. ..+|++||+++++++.+
T Consensus 319 ~~~~~~~~~v~~l~~a~~~~~g~~~~--~~~~~g~td~~~~~~~gip~v~~--Gp~~------~~~H~~nE~v~i~~l~~ 388 (400)
T PRK13983 319 PPTPPDSEIVKKLKRAIKEVRGIEPK--VGGIGGGTVAAFLRKKGYPAVVW--STLD------ETAHQPNEYAKISNLIE 388 (400)
T ss_pred cCCCCCcHHHHHHHHHHHHhcCCCce--eeeecCcHHHHHHHHcCCCEEEe--CCcc------ccCCCCCceeeHHHHHH
Confidence 33456788999999999998888764 4567899999999876 998764 6432 46999999999999999
Q ss_pred HHHHHHHHHHH
Q 013076 420 GAALHASLALR 430 (450)
Q Consensus 420 ~~~~~~~~~~~ 430 (450)
++++|.+++.+
T Consensus 389 ~~~~~~~~~~~ 399 (400)
T PRK13983 389 DAKVFALLLLE 399 (400)
T ss_pred HHHHHHHHHhc
Confidence 99999998753
No 15
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=2.3e-52 Score=417.79 Aligned_cols=365 Identities=19% Similarity=0.257 Sum_probs=289.7
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCC
Q 013076 43 KLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSL 122 (450)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvV 122 (450)
++.+++++++ +++++++++|++|||++++|.++++||.++|+++||++...+...|+++.++.+ .|+|+|+||+|||
T Consensus 3 ~~~~~~~~~~--~~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~~~g~~-~~~l~l~~H~DtV 79 (395)
T TIGR03526 3 QIKSEAEKYR--GDMIRFLRDLVAIPSESGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTV 79 (395)
T ss_pred hHHHHHHHHH--HHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEEEcCCCcEEEEeCCC-CCEEEEEeecccc
Confidence 5778889887 999999999999999999999999999999999999853333457899998543 3889999999999
Q ss_pred CCcCcCCCcccc----CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC--ccchHHHHHcccc
Q 013076 123 PLQEMVEWEYKS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG--GGGAHKVLEAGVL 193 (450)
Q Consensus 123 p~~~~~~w~~~~----~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg--~~Ga~~l~~~~~~ 193 (450)
|+++...|.+++ ++||++||||+ ||+++++|+|++.|++.+..+++++.|++++|||+ +.|++++++++.+
T Consensus 80 p~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~~ 159 (395)
T TIGR03526 80 GIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDKI 159 (395)
T ss_pred CCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccCC
Confidence 998878896543 46899999996 99999999999999988777788999999999993 4567777776543
Q ss_pred cccceEEEeccCCCCCCc-eEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhccc-CCC-CC
Q 013076 194 EKVNAIFGLHVDPNLPIG-EVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRE-ADP-LD 270 (450)
Q Consensus 194 ~~~d~~i~~~~~~~~~~g-~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~-~~~-~~ 270 (450)
++|++++. + |++ .+. ..++|..+++|+++|+++|++.|+.|+|||..+++++.+|+++.... .++ .+
T Consensus 160 -~~d~~i~~--e---p~~~~i~----~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~ 229 (395)
T TIGR03526 160 -KPEFVVIT--E---PTDMNIY----RGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLG 229 (395)
T ss_pred -CCCEEEec--C---CCCceEE----EEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCcccC
Confidence 46777763 2 332 222 23579999999999999999999999999999999999998875321 122 34
Q ss_pred CceEEEEEEecCC-CCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCC-----------
Q 013076 271 SQVVTVAKFQGGG-AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKP----------- 338 (450)
Q Consensus 271 ~~t~~i~~i~gG~-~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~----------- 338 (450)
..+++++.|+||. ..|+||++|++.+|+|++|+++.+++.+.|+++++.. +..+++++.....+
T Consensus 230 ~~~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (395)
T TIGR03526 230 KGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ----GAEAEVEMYEYDRPSYTGLVYPTEC 305 (395)
T ss_pred ccceeeeeeecCCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHhc----CCcceEEEecccccccccccccccc
Confidence 5799999999875 8999999999999999999999999999999987642 22233332110001
Q ss_pred CCCCc--cCChHHHHHHHHHHHhhcCCccccccCCCcccchHH-HHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCC
Q 013076 339 FFPPT--INNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFS-FYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNE 414 (450)
Q Consensus 339 ~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~-~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~ 414 (450)
.+|++ +.|+++++.+.+++++.+|..+. ....++++|++ ++.+. +|++. ||| |+...+|++||||++
T Consensus 306 ~~p~~~~~~~~~~~~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v~--~Gp-----g~~~~aH~~dE~i~i 376 (395)
T TIGR03526 306 YFPTWVLPEDHLITKAALETYKRLFGKEPG--VDKWTFSTNGVSIMGRHGIPVIG--FGP-----GDEDQAHAPNEKTWK 376 (395)
T ss_pred ccCccccCCCCHHHHHHHHHHHHHhCCCCc--eeeeeeecccceehhhcCCCEEE--ECC-----cchhhccCCCceEEH
Confidence 23443 45788999999999999887653 33567778874 44555 89765 664 334679999999999
Q ss_pred CccHHHHHHHHHHHHHHHh
Q 013076 415 DALPYGAALHASLALRYLL 433 (450)
Q Consensus 415 ~~l~~~~~~~~~~~~~l~~ 433 (450)
+++.+++++|++++..+++
T Consensus 377 ~~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03526 377 EDLVKAAAMYAAIPTVYLQ 395 (395)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999874
No 16
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=2.2e-52 Score=418.11 Aligned_cols=366 Identities=19% Similarity=0.234 Sum_probs=288.7
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCC
Q 013076 43 KLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSL 122 (450)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvV 122 (450)
++.++++++. +++++++++|++|||++++|.++++||.++|+++||++.......|+++.++.+ +|+|+|+||||||
T Consensus 3 ~~~~~i~~~~--~~~~~~~~~lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~~~g~~-~~~l~l~~H~DtV 79 (395)
T TIGR03320 3 QIKSEAKKYR--GDMIRFLRDLVAIPSESGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTV 79 (395)
T ss_pred hHHHHHHHHH--HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCcEEEECCCCCEEEEeCCC-CcEEEEEeccccc
Confidence 5778888877 999999999999999999999999999999999999843233457899998543 4899999999999
Q ss_pred CCcCcCCCcccc----CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCc--cchHHHHHcccc
Q 013076 123 PLQEMVEWEYKS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGG--GGAHKVLEAGVL 193 (450)
Q Consensus 123 p~~~~~~w~~~~----~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~--~Ga~~l~~~~~~ 193 (450)
|+++..+|.+++ ++||++||||+ ||+++++|.|+++|++.+..++++|.|++++|||.+ .+.++++++..+
T Consensus 80 p~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~~ 159 (395)
T TIGR03320 80 GIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDGI 159 (395)
T ss_pred CCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcCC
Confidence 998878895543 46899999997 999999999999999888777889999999999943 344667765333
Q ss_pred cccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhccc-CCC-CCC
Q 013076 194 EKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRE-ADP-LDS 271 (450)
Q Consensus 194 ~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~-~~~-~~~ 271 (450)
.+|++++. +|. ...+. .+++|..+++|+++|+++|+|.|+.|.|||..+++++..|+++.... .++ .+.
T Consensus 160 -~~d~~iv~--ep~--~~~i~----~g~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~ 230 (395)
T TIGR03320 160 -KPEFVVIT--EPT--DMNIY----RGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGK 230 (395)
T ss_pred -CCCEEEEc--CCC--ccceE----EecceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCc
Confidence 46777763 222 12222 23679999999999999999999999999999999999998875321 122 345
Q ss_pred ceEEEEEEecCC-CCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCC-----------CC
Q 013076 272 QVVTVAKFQGGG-AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEK-----------PF 339 (450)
Q Consensus 272 ~t~~i~~i~gG~-~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~-----------~~ 339 (450)
.+++++.|++|. ..|+||++|++.+|+|+.|+++.+++.++|++++... +..+++++..... ..
T Consensus 231 ~t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (395)
T TIGR03320 231 GTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ----GAEAKVEMYNYDRPSYTGLVYPTECY 306 (395)
T ss_pred CceeeeeeecCCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHHHHhhc----CCCceEeeeccCcccccccccccccc
Confidence 699999999876 8999999999999999999999999999999986532 2233333211001 12
Q ss_pred CCCc--cCChHHHHHHHHHHHhhcCCccccccCCCcccchHH-HHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCC
Q 013076 340 FPPT--INNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFS-FYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNED 415 (450)
Q Consensus 340 ~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~-~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~ 415 (450)
+|++ +.|+++++.+.+++++++|.++. ....++++|+. ++.+. +|++. ||| |+...+|++||||+++
T Consensus 307 ~~~~~~~~~~~~v~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v~--~Gp-----g~~~~aH~~nE~v~i~ 377 (395)
T TIGR03320 307 FPTWVLPEDHLITKAALETYKRLFGKEPG--VDKWTFSTNGVSIMGRHGIPVIG--FGP-----GDEDQAHAPNEKTWKE 377 (395)
T ss_pred cCccccCCCCHHHHHHHHHHHHHhCCCCc--eeecceecccceehhhcCCCEEE--ECC-----CchhhccCCCcEEEHH
Confidence 3443 45678999999999999888663 33567778874 55555 89765 664 3456799999999999
Q ss_pred ccHHHHHHHHHHHHHHHh
Q 013076 416 ALPYGAALHASLALRYLL 433 (450)
Q Consensus 416 ~l~~~~~~~~~~~~~l~~ 433 (450)
++.+++++|++++.+||+
T Consensus 378 ~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03320 378 DLVRAAAMYAAIPTVYLE 395 (395)
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 999999999999999974
No 17
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=5.5e-53 Score=419.91 Aligned_cols=348 Identities=19% Similarity=0.246 Sum_probs=280.8
Q ss_pred HHHHHhHcCCC---CCcchHHHHHHHHHHHHhcCCceecc---cCCce----EEEEEcCC-CCceEEEEeeccCCCCcCc
Q 013076 59 GIRRKIHQNPE---LGYQEFETSQLIRSELDKMGIKYKHP---VAVTG----VVGFIGTG-EPPFVALRADMDSLPLQEM 127 (450)
Q Consensus 59 ~~l~~l~~ips---~s~~e~~~~~~l~~~l~~~G~~~~~~---~~~~n----vva~~~~~-~~~~ill~~H~DvVp~~~~ 127 (450)
+++++|++||| ++++|.++++||+++|+++|++++.. .+..| +++.+.+. ++|+|+|+|||||||+++.
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ill~~H~DtVp~~~~ 81 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNGNEKSLIFNGHYDVVPAGDL 81 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCCCCCEEEEecccccccCCCh
Confidence 68899999999 78899999999999999999998652 12233 55555443 4589999999999999877
Q ss_pred CCCc---ccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceE
Q 013076 128 VEWE---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAI 199 (450)
Q Consensus 128 ~~w~---~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~ 199 (450)
.+|+ |+. +++|++||||+ |++++++|.|+++|++.+..++++|.|+|+++|| ++.|++++++++.+.++|++
T Consensus 82 ~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~d~~ 161 (375)
T TIGR01910 82 ELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGYFKDADGV 161 (375)
T ss_pred hhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCCCCCCCEE
Confidence 7884 543 56899999998 8999999999999998887789999999999999 77899999998776557877
Q ss_pred EEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccC------CCCCCce
Q 013076 200 FGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREA------DPLDSQV 273 (450)
Q Consensus 200 i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~------~~~~~~t 273 (450)
+.. ++.. .+.+. ..++|..+++|+++|+++|+|.|+.|.|||..+++++.+|+++..... .....++
T Consensus 162 i~~--~~~~-~~~v~----~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t 234 (375)
T TIGR01910 162 LIP--EPSG-GDNIV----IGHKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSYGFIPGPIT 234 (375)
T ss_pred EEC--CCCC-CCceE----EEecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccCCCcc
Confidence 763 2221 12232 235799999999999999999999999999999999999988753211 1234689
Q ss_pred EEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHH
Q 013076 274 VTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYF 353 (450)
Q Consensus 274 ~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~ 353 (450)
++++.|+||...|+||++|++.+|+|+.|+++.+++.++|++++++.+...+++++++.... .+.......|+++++.+
T Consensus 235 ~~i~~i~gG~~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 313 (375)
T TIGR01910 235 FNPGVIKGGDWVNSVPDYCEFSIDVRIIPEENLDEVKQIIEDVVKALSKSDGWLYENEPVVK-WSGPNETPPDSRLVKAL 313 (375)
T ss_pred ccceeEECCCCcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhcCcHHhhCCCeee-ecCCcCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999887655566555543110 12112345678899999
Q ss_pred HHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHH
Q 013076 354 QTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAAL 423 (450)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~ 423 (450)
++++++.+|.++. +...+|++|++++.+. +|++. |||+ ....+|++|||++++++.+++++
T Consensus 314 ~~~~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg-----~~~~~H~~~E~v~~~~~~~~~~~ 375 (375)
T TIGR01910 314 EAIIKKVRGIEPE--VLVSTGGTDARFLRKAGIPSIV--YGPG-----DLETAHQVNEYISIKNLVESTKV 375 (375)
T ss_pred HHHHHHHhCCCCe--EeeeccchhHHHHHHcCCcEEE--ECCC-----CccccCCCCceeEHHHHHHHhhC
Confidence 9999988787763 4567899999999987 99865 6643 23579999999999999998864
No 18
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=1.1e-51 Score=413.87 Aligned_cols=363 Identities=19% Similarity=0.202 Sum_probs=282.9
Q ss_pred HHHHHHHHHhHcCCCCCcc--hHHHHHHHHHHHHhcCCceec---ccCCceEEEEEcCC-C-CceEEEEeeccCCCCcCc
Q 013076 55 GWMIGIRRKIHQNPELGYQ--EFETSQLIRSELDKMGIKYKH---PVAVTGVVGFIGTG-E-PPFVALRADMDSLPLQEM 127 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~~~~---~~~~~nvva~~~~~-~-~~~ill~~H~DvVp~~~~ 127 (450)
++++++|++|++|||++++ |.++++||+++|+++|++++. ..+++|++++++++ + +|+|+|+|||||||+++
T Consensus 9 ~~~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~- 87 (400)
T TIGR01880 9 DIAVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFR- 87 (400)
T ss_pred HHHHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCc-
Confidence 6789999999999999764 678999999999999998764 23578999999553 3 38999999999999875
Q ss_pred CCC---cccc--CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-cchHHHHHcccccccc
Q 013076 128 VEW---EYKS--KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG-GGAHKVLEAGVLEKVN 197 (450)
Q Consensus 128 ~~w---~~~~--~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~-~Ga~~l~~~~~~~~~d 197 (450)
..| ||.. ++||++||||+ |++++++|.|+++|++.+.+++++|.|+|++||| ++ .|++++++++.+.+.|
T Consensus 88 ~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~~~ 167 (400)
T TIGR01880 88 EHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKALN 167 (400)
T ss_pred ccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccCCc
Confidence 467 4553 25899999998 8999999999999999887889999999999999 55 5999999876555556
Q ss_pred eEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcc---------cCCC
Q 013076 198 AIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSR---------EADP 268 (450)
Q Consensus 198 ~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~---------~~~~ 268 (450)
+.++.+.....|++.. ..+.+++|..+++|+++|+++|++.|. +.||+..|++++..|+++... ....
T Consensus 168 ~~~~~d~g~~~~~~~~--~i~~~~kG~~~~~l~v~G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 244 (400)
T TIGR01880 168 LGFALDEGLASPDDVY--RVFYAERVPWWVVVTAPGNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAI 244 (400)
T ss_pred eEEEEcCCCccccccc--ceeEEeeEEEEEEEEEecCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHHHHHhcCccccc
Confidence 6666532111334322 233457899999999999999999864 479999999999988765311 1111
Q ss_pred CCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChH
Q 013076 269 LDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNND 348 (450)
Q Consensus 269 ~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~ 348 (450)
...+|++++.|+||...|+||++|++.+|+|++|+++.+++.++|+++++.. ..++++++..... .+...+...|++
T Consensus 245 ~~~~t~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~ 321 (400)
T TIGR01880 245 GDVTSVNLTKLKGGVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCADA--GEGVTYEFSQHSG-KPLVTPHDDSNP 321 (400)
T ss_pred cccceeecceeccCCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHhcc--CCceEEEEeecCC-CCCCCCCCCCCH
Confidence 1247999999999999999999999999999999999999999999998853 2344444432110 111112234678
Q ss_pred HHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHH
Q 013076 349 LHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASL 427 (450)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~ 427 (450)
+++.+++++++. +.++ .+...+|+||++++.+. +|++. |||... ....+|++||+|++++|.+++++|.++
T Consensus 322 lv~~l~~a~~~~-~~~~--~~~~~~g~tDa~~~~~~gip~v~--fgp~~~---~~~~aH~~dE~i~i~~l~~~~~~~~~~ 393 (400)
T TIGR01880 322 WWVAFKDAVKEM-GCTF--KPEILPGSTDSRYIRAAGVPALG--FSPMNN---TPVLLHDHNEFLNEAVFLRGIEIYQTL 393 (400)
T ss_pred HHHHHHHHHHHc-CCee--cceeecCcchHHHHHhCCCCeEE--ECCccC---CcccccCCCCceEHHHHHHHHHHHHHH
Confidence 999999999986 6543 23567899999999887 89854 565421 124699999999999999999999999
Q ss_pred HHHHH
Q 013076 428 ALRYL 432 (450)
Q Consensus 428 ~~~l~ 432 (450)
+.++.
T Consensus 394 l~~~~ 398 (400)
T TIGR01880 394 ISALA 398 (400)
T ss_pred HHHhh
Confidence 99885
No 19
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=8.9e-52 Score=410.62 Aligned_cols=353 Identities=19% Similarity=0.241 Sum_probs=281.8
Q ss_pred HHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecc--cCCceEEEEEcCCCCceEEEEeeccCCCCcCcCCCc---c
Q 013076 58 IGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP--VAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWE---Y 132 (450)
Q Consensus 58 ~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~---~ 132 (450)
++++++|++|||+|++|.++++||+++|+++||+++.. .+.+|+++++++ .+|+|+|+||+||||+++.+.|. |
T Consensus 2 ~~~l~~lv~ips~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~g~-~~~~i~~~~H~DtVp~~~~~~W~~~p~ 80 (370)
T TIGR01246 2 TELAKELISRPSVTPNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWATRGT-GEPVLAFAGHTDVVPAGPEEQWSSPPF 80 (370)
T ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHCCCEEEEEecCCCceEEEEecC-CCcEEEEEccccccCCCCccccccCCC
Confidence 67899999999999999999999999999999998752 346799998754 45999999999999998777884 5
Q ss_pred cc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-cchHHHHHcccc--cccceEEEecc
Q 013076 133 KS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG-GGAHKVLEAGVL--EKVNAIFGLHV 204 (450)
Q Consensus 133 ~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~-~Ga~~l~~~~~~--~~~d~~i~~~~ 204 (450)
.. .+||++||||+ ||++++++.|++.+++.+..++++|+|+|++||| ++ .|++.+++.... ..+|+++..++
T Consensus 81 ~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep 160 (370)
T TIGR01246 81 EPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDYCIVGEP 160 (370)
T ss_pred CcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCC
Confidence 43 46899999997 8999999999999988877788999999999999 44 699988763211 24688776433
Q ss_pred CCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhccc-CCCCCCceEEEEEEecCC
Q 013076 205 DPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRE-ADPLDSQVVTVAKFQGGG 283 (450)
Q Consensus 205 ~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~-~~~~~~~t~~i~~i~gG~ 283 (450)
....+.+.. ...+++|..+++++++|+++|++.|+.|.||+..+++++..|++..... .+.+..++++++.|+||.
T Consensus 161 ~~~~~~~~~---i~~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i~~g~ 237 (370)
T TIGR01246 161 SSVKKLGDV---IKNGRRGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNIHAGT 237 (370)
T ss_pred CCcccCCce---EEEeeeEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeeeecCC
Confidence 221111211 1223579999999999999999999999999999999999998764221 122456799999999996
Q ss_pred -CCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcC
Q 013076 284 -AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLD 362 (450)
Q Consensus 284 -~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g 362 (450)
..|+||++|++.+|+|++|+++.+++.++|+++++. .++.+++++. ....|...+|+++++.+++++++.+|
T Consensus 238 ~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~~~~~v~~~---~~~~p~~~~~~~~~~~~~~a~~~~~g 310 (370)
T TIGR01246 238 GANNVIPGELYVQFNLRFSTEVSDEILKQRVEAILDQ----HGLDYDLEWS---LSGEPFLTNDGKLIDKAREAIEETNG 310 (370)
T ss_pred CCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCEEEEEe---cCCcceeCCCCHHHHHHHHHHHHHhC
Confidence 689999999999999999999999999999998764 3566666652 11222223378899999999998888
Q ss_pred CccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHH
Q 013076 363 TQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRY 431 (450)
Q Consensus 363 ~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l 431 (450)
.++. +...+|++|++++... +|++. |||.. ..+|++||+++++++.+++++|..++.+|
T Consensus 311 ~~~~--~~~~~g~~d~~~~~~~g~p~~~--~Gp~~------~~~H~~~E~i~i~~l~~~~~~~~~~l~~~ 370 (370)
T TIGR01246 311 IKPE--LSTGGGTSDGRFIALMGAEVVE--FGPVN------ATIHKVNECVSIEDLEKLSDVYQDLLENL 370 (370)
T ss_pred CCCc--eecCCCCchHHHHHHcCCCEEE--ecCCc------ccCCCCCceeEHHHHHHHHHHHHHHHHhC
Confidence 7663 4567889999999876 88654 67543 35999999999999999999999998764
No 20
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-51 Score=416.52 Aligned_cols=361 Identities=17% Similarity=0.208 Sum_probs=280.8
Q ss_pred HHHHHHHHHhHcCCCCCcc-h--HHHHHHHHHHHHhcCCceecc--cCCceEEEEEcCCCCceEEEEeeccCCCCcCcCC
Q 013076 55 GWMIGIRRKIHQNPELGYQ-E--FETSQLIRSELDKMGIKYKHP--VAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVE 129 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~-e--~~~~~~l~~~l~~~G~~~~~~--~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~ 129 (450)
+.+++++++|++|||++++ | .++++||.++|+++||+++.. .+++|++++++++.+|+|+|+|||||||+++.+.
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~~~~~~vll~gH~DvVp~~~~~~ 81 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERTKGHPVVYGEINVGAKKTLLIYNHYDVQPVDPLSE 81 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCEEEEEecccCCCCCcccc
Confidence 5689999999999999964 3 689999999999999998753 2578999999755468999999999999987678
Q ss_pred Cc---ccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHccc-ccccceEE
Q 013076 130 WE---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGV-LEKVNAIF 200 (450)
Q Consensus 130 w~---~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~-~~~~d~~i 200 (450)
|. |.. ++||+|||||+ ||+++++|.|++.+++.+ .++++|.|+|++||| |+.|+++++++.. ..++|+++
T Consensus 82 W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~vi 160 (436)
T PRK06446 82 WKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGSPNLEDFIEKNKNKLKADSVI 160 (436)
T ss_pred ccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCCHhHHHHHHHHHHHhCCCEEE
Confidence 95 443 56999999998 999999999999887654 678899999999999 7789988887621 12467777
Q ss_pred EeccCCCCCCceEEeecCcccccceEEEEEEEe--cCCCCCCCCCCCcHHHHHHHHHHHHhhhhccc-------------
Q 013076 201 GLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGG--KGGHAAIPQHSIDPILAASNVIVSLQHLVSRE------------- 265 (450)
Q Consensus 201 ~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G--~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~------------- 265 (450)
+... ...+.+...+ ..+++|..|++++++| +++|+|.|+.|.|||..+++++.+|.+.....
T Consensus 161 ~E~~-~~~~~~~~~i--~~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 237 (436)
T PRK06446 161 MEGA-GLDPKGRPQI--VLGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELT 237 (436)
T ss_pred ECCC-CccCCCCeEE--EEecCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCC
Confidence 5321 1112232111 2346899999999999 99999999999999999999999997642000
Q ss_pred --------------------C---------------CCCCCceEEEEEEecC----CCCCCCCCeEEEEEEEecCChhhH
Q 013076 266 --------------------A---------------DPLDSQVVTVAKFQGG----GAFNVIPDSVLIGGTFRAFSKESF 306 (450)
Q Consensus 266 --------------------~---------------~~~~~~t~~i~~i~gG----~~~nviP~~a~~~idiR~~~~~~~ 306 (450)
. .....+++|++.|+|| ...|+||++|++++|+|++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~~ 317 (436)
T PRK06446 238 EEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQDP 317 (436)
T ss_pred HHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCCH
Confidence 0 0123579999999987 367999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCc--cCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhh-
Q 013076 307 TQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPT--INNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQE- 383 (450)
Q Consensus 307 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~- 383 (450)
+++.++|++++++. +..+++.+. ...+++ +.++++++.+++++++++|.++.. ....+|++|+++|.+
T Consensus 318 ~~v~~~l~~~~~~~----~~~~~~~~~----~~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~~-~~~~~g~~d~~~~~~~ 388 (436)
T PRK06446 318 YKIFELLKKHLQKV----GFNGEIIVH----GFEYPVRTSVNSKVVKAMIESAKRVYGTEPVV-IPNSAGTQPMGLFVYK 388 (436)
T ss_pred HHHHHHHHHHHHHc----CCCeEEEEc----CCcceeecCCCCHHHHHHHHHHHHHhCCCCce-ecCCCCcchHHHHHHH
Confidence 99999999998753 234455442 122232 356889999999999998886632 223456778888865
Q ss_pred h-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 384 V-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 384 ~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
. +|++++++|++. + ...+|++||+|+++++.+++++|.+++.++.
T Consensus 389 ~gip~v~~~~g~g~---~-~~~~H~~dE~i~i~~l~~~~~~~~~~~~~~~ 434 (436)
T PRK06446 389 LGIRDIVSAIGVGG---Y-YSNAHAPNENIRIDDYYKAIKHTEEFLKLYS 434 (436)
T ss_pred hCCCcceeecccCC---C-CcCCcCCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 3 898765566542 1 2579999999999999999999999998764
No 21
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.7e-51 Score=410.88 Aligned_cols=349 Identities=17% Similarity=0.258 Sum_probs=277.4
Q ss_pred HHHHHHHHHhHcCCCCCcch-HHHHHHHHHHHHhcCCceecc----cCCceEEEEEcCCCCceEEEEeeccCCCCcCcCC
Q 013076 55 GWMIGIRRKIHQNPELGYQE-FETSQLIRSELDKMGIKYKHP----VAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVE 129 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~----~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~ 129 (450)
.++++++++|++|||+|++| .++++||.++|+++|+++++. .+++||+++++++.+|+|+|+|||||||+++ ..
T Consensus 4 ~~~~~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~~~~~ill~~H~Dtv~~~~-~~ 82 (385)
T PRK07522 4 MSSLDILERLVAFDTVSRDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPADRGGIVLSGHTDVVPVDG-QA 82 (385)
T ss_pred hhHHHHHHHHhCCCCcCCCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCCCCCeEEEEeecccccCCC-CC
Confidence 46899999999999999887 599999999999999998652 2458999999765468999999999999865 46
Q ss_pred Cc---ccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccc--cccceE
Q 013076 130 WE---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVL--EKVNAI 199 (450)
Q Consensus 130 w~---~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~--~~~d~~ 199 (450)
|. |.. ++||++||||+ ||+++++|+|+++|++. .++++|.|+|++||| ++.|+++++++... .++|++
T Consensus 83 W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~ 160 (385)
T PRK07522 83 WTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAA--PLRRPLHLAFSYDEEVGCLGVPSMIARLPERGVKPAGC 160 (385)
T ss_pred CCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhC--CCCCCEEEEEEeccccCCccHHHHHHHhhhcCCCCCEE
Confidence 84 543 45899999997 99999999999999876 467899999999999 77899999875321 235766
Q ss_pred EEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCC-----C---CCC
Q 013076 200 FGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREAD-----P---LDS 271 (450)
Q Consensus 200 i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~-----~---~~~ 271 (450)
+.. +|++. .....++|..+++|+++|+++|+|.|+.|+||+..+++++.+|+++..+... . ...
T Consensus 161 i~~-----ep~~~---~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 232 (385)
T PRK07522 161 IVG-----EPTSM---RPVVGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFDPPY 232 (385)
T ss_pred EEc-----cCCCC---eeeeeecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCc
Confidence 642 34332 1123457999999999999999999999999999999999999887432111 1 113
Q ss_pred ceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHH------HHHhhCCeEEEEeeccCCCCCCCccC
Q 013076 272 QVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIG------QAAVQRCSATVDFLSKEKPFFPPTIN 345 (450)
Q Consensus 272 ~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~~~~ 345 (450)
++++++.|+||...|+||++|++.+|+|++|+++.+++.++|++.+++ .+...+++++++. ...+|++..
T Consensus 233 ~t~~i~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~v~~~~----~~~~~~~~~ 308 (385)
T PRK07522 233 STLQTGTIQGGTALNIVPAECEFDFEFRNLPGDDPEAILARIRAYAEAELLPEMRAVHPEAAIEFEP----LSAYPGLDT 308 (385)
T ss_pred ceeEEeeeecCccccccCCceEEEEEEccCCCCCHHHHHHHHHHHHHhhcchhhhhhcCCCcEEEEe----ccCCCCCCC
Confidence 689999999999999999999999999999999999999999999987 2334566666655 334555543
Q ss_pred --ChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHH
Q 013076 346 --NNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAA 422 (450)
Q Consensus 346 --d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~ 422 (450)
++++++.++++.. ..+ .....+++|+++|... +|++. +|| |....+|++||+|+++++.++++
T Consensus 309 ~~~~~~v~~~~~~~~----~~~---~~~~~~~td~~~~~~~gip~v~--~Gp-----g~~~~~H~~~E~i~i~~l~~~~~ 374 (385)
T PRK07522 309 AEDAAAARLVRALTG----DND---LRKVAYGTEAGLFQRAGIPTVV--CGP-----GSIEQAHKPDEFVELAQLAACEA 374 (385)
T ss_pred CCCcHHHHHHHHHhC----CCC---cceEeeecchHHhccCCCCEEE--ECC-----CChhhCCCCCccccHHHHHHHHH
Confidence 4678888876543 322 1235678999999876 89765 553 33457999999999999999999
Q ss_pred HHHHHHHHHH
Q 013076 423 LHASLALRYL 432 (450)
Q Consensus 423 ~~~~~~~~l~ 432 (450)
+|..++.++.
T Consensus 375 ~~~~~~~~~~ 384 (385)
T PRK07522 375 FLRRLLASLA 384 (385)
T ss_pred HHHHHHHHHh
Confidence 9999988764
No 22
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=4.3e-51 Score=415.93 Aligned_cols=372 Identities=16% Similarity=0.163 Sum_probs=283.9
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhHcCCCCCc------chHHHHHHHHHHHHhcCCc-eec--ccCCceEEEEEcCC-CCc
Q 013076 42 KKLLNFAKRQELVGWMIGIRRKIHQNPELGY------QEFETSQLIRSELDKMGIK-YKH--PVAVTGVVGFIGTG-EPP 111 (450)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~------~e~~~~~~l~~~l~~~G~~-~~~--~~~~~nvva~~~~~-~~~ 111 (450)
+++.++++++. ++++++|++|++|||+++ +|.++++||+++|+++||+ ++. ..+++||++.+.++ ++|
T Consensus 3 ~~~~~~~~~~~--~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~~~~~ 80 (456)
T PRK08201 3 QQVEAYLRERR--EAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHAPGKP 80 (456)
T ss_pred hHHHHHHHHHH--HHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCCCCCC
Confidence 46788899988 999999999999999985 4678999999999999997 443 23567899988543 358
Q ss_pred eEEEEeeccCCCCcCcCCCc---cc-cCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cccc
Q 013076 112 FVALRADMDSLPLQEMVEWE---YK-SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGG 183 (450)
Q Consensus 112 ~ill~~H~DvVp~~~~~~w~---~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~G 183 (450)
+|+|+||+||||+++...|+ |. .++||+|||||+ ||+++++|.|++++++.+..++++|.|++++||| |+.|
T Consensus 81 ~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g 160 (456)
T PRK08201 81 TVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPN 160 (456)
T ss_pred EEEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCcc
Confidence 99999999999998766795 44 356899999998 9999999999999987766788899999999999 7789
Q ss_pred hHHHHHccc-ccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCC--CCCCCCC-CCcHHHHHHHHHHHHh
Q 013076 184 AHKVLEAGV-LEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGG--HAAIPQH-SIDPILAASNVIVSLQ 259 (450)
Q Consensus 184 a~~l~~~~~-~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~--Hss~p~~-g~nAi~~~~~~l~~l~ 259 (450)
+..++++.. .-+.|++++..+....+.. -. .+.++||.++++|+++|+++ |||.|.. +.|||..+++++.+|+
T Consensus 161 ~~~~l~~~~~~~~~d~~ii~e~~~~~~~~-~~--i~~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~ 237 (456)
T PRK08201 161 LDSFVEEEKDKLAADVVLISDTTLLGPGK-PA--ICYGLRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASLH 237 (456)
T ss_pred HHHHHHhhHHhccCCEEEEeCCCcCCCCC-EE--EEEecCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhcC
Confidence 998887532 1135777764322111111 11 23457899999999999998 9987554 5799999999999997
Q ss_pred hhhccc-----------------------------------CCC-------------CCCceEEEEEEecCCC----CCC
Q 013076 260 HLVSRE-----------------------------------ADP-------------LDSQVVTVAKFQGGGA----FNV 287 (450)
Q Consensus 260 ~~~~~~-----------------------------------~~~-------------~~~~t~~i~~i~gG~~----~nv 287 (450)
++..+. .+. ...+|+|++.|+||.. .|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~Nv 317 (456)
T PRK08201 238 DEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKTV 317 (456)
T ss_pred CCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCceE
Confidence 642110 000 1246899999998853 799
Q ss_pred CCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCc--cCChHHHHHHHHHHHhhcCCcc
Q 013076 288 IPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPT--INNNDLHKYFQTVAGDMLDTQK 365 (450)
Q Consensus 288 iP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~ 365 (450)
||++|++.+|+|++|+++.+++.++|+++++... ..+.++++.. ...++++ ..|+++++.+++++++.+|.++
T Consensus 318 VP~~a~~~~diR~~p~~~~e~v~~~i~~~l~~~~-~~~~~v~~~~----~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~~ 392 (456)
T PRK08201 318 IPAEAHAKITCRLVPDQDPQEILDLIEAHLQAHT-PAGVRVTIRR----FDKGPAFVAPIDHPAIQAAARAYEAVYGTEA 392 (456)
T ss_pred ECcceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEE----CCCcCceecCCCCHHHHHHHHHHHHHhCCCc
Confidence 9999999999999999999999999999987632 2334455443 1223333 4567899999999999888765
Q ss_pred ccccCCCcccc---hHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 366 VKVMAPVMGSE---DFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 366 ~~~~~~~~g~t---D~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
. ... .|++ |+.++... +|++++|+|.. ..++|++||||++++|.+++++|..++.++.
T Consensus 393 ~--~~~-~gg~~~~~~~~~~~~gip~v~~GpG~~------~~~~H~~nE~v~i~~l~~~~~~l~~~~~~~~ 454 (456)
T PRK08201 393 A--FTR-MGGSIPVVETFSSQLHIPIVLMGFGLP------SENFHAPNEHFHLENFDKGLRTLVEYWHQLA 454 (456)
T ss_pred e--ecC-CCCcHHHHHHHHHHhCCCEEEecCCCC------CCCCCCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 3 223 3444 56655544 89877554421 2569999999999999999999999998874
No 23
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4.8e-51 Score=407.36 Aligned_cols=348 Identities=20% Similarity=0.274 Sum_probs=278.5
Q ss_pred HHHHHHHHHhHcCCCCCcch-------HHHHHHHHHHHHhcCCceecc-----cCCceEEEEEcCCCCceEEEEeeccCC
Q 013076 55 GWMIGIRRKIHQNPELGYQE-------FETSQLIRSELDKMGIKYKHP-----VAVTGVVGFIGTGEPPFVALRADMDSL 122 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e-------~~~~~~l~~~l~~~G~~~~~~-----~~~~nvva~~~~~~~~~ill~~H~DvV 122 (450)
+.+++++++|++|||+|++| +++++||.++|+++|++++.. .+++|++|++++++ ++|+|+||||||
T Consensus 5 ~~~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~g~~~-~~il~~~H~Dvv 83 (383)
T PRK05111 5 PSFIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASLGSGE-GGLLLAGHTDTV 83 (383)
T ss_pred hHHHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEeCCCC-CeEEEEeeecee
Confidence 56899999999999999876 569999999999999998642 14679999995433 689999999999
Q ss_pred CCcCcCCC---ccc-cCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHccccc
Q 013076 123 PLQEMVEW---EYK-SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLE 194 (450)
Q Consensus 123 p~~~~~~w---~~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~ 194 (450)
|+++ ..| ||+ .++||++||||+ ||+++++|.|++.|++. .++++|.|+|++||| ++.|++++++++.+.
T Consensus 84 p~~~-~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~ 160 (383)
T PRK05111 84 PFDE-GRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--KLKKPLYILATADEETSMAGARAFAEATAIR 160 (383)
T ss_pred cCCC-CcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--CCCCCeEEEEEeccccCcccHHHHHhcCCCC
Confidence 9864 467 455 356899999997 99999999999999864 467899999999999 778999999876543
Q ss_pred ccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhc----ccCCC--
Q 013076 195 KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVS----READP-- 268 (450)
Q Consensus 195 ~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~----~~~~~-- 268 (450)
.|+++. ++|++.. +..+++|.++++|+++|+++|+|.|+.|.|||..+++++.+++++.. +...+
T Consensus 161 -~d~~i~-----~ep~~~~---~~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 231 (383)
T PRK05111 161 -PDCAII-----GEPTSLK---PVRAHKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHNPAF 231 (383)
T ss_pred -CCEEEE-----cCCCCCc---eeecccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCCccC
Confidence 466654 2344321 12246799999999999999999999999999999999999987642 11111
Q ss_pred -CCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCc--cC
Q 013076 269 -LDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPT--IN 345 (450)
Q Consensus 269 -~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~ 345 (450)
...+++|++.|+||...|+||++|++.+|+|++|+++.+++.++|++.+++....++++++++.. ....|++ ..
T Consensus 232 ~~~~~t~~i~~i~gg~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 308 (383)
T PRK05111 232 TVPYPTLNLGHIHGGDAPNRICGCCELHFDIRPLPGMTLEDLRGLLREALAPVSERWPGRITVAPL---HPPIPGYECPA 308 (383)
T ss_pred CCCCCceeEeeeecCCcCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEecc---ccCCCCcCCCC
Confidence 24689999999999999999999999999999999999999999999999887777777766531 1233433 34
Q ss_pred ChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHH
Q 013076 346 NNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALH 424 (450)
Q Consensus 346 d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~ 424 (450)
++++++.+++++ |.++ ...++++|+.++... +|+++ +||+ ....+|++||+++++++.+++++|
T Consensus 309 ~~~l~~~~~~~~----g~~~----~~~~~~~Da~~~~~~g~p~v~--~G~g-----~~~~~H~~~E~v~~~~l~~~~~i~ 373 (383)
T PRK05111 309 DHQLVRVVEKLL----GHKA----EVVNYCTEAPFIQQLGCPTLV--LGPG-----SIEQAHQPDEYLELSFIKPTRELL 373 (383)
T ss_pred CCHHHHHHHHHh----CCCC----ceeeeeccHHHHHhcCCCEEE--ECCC-----chHhCcCCCCcccHHHHHHHHHHH
Confidence 567888776553 5443 234678999998776 88766 5543 235699999999999999999999
Q ss_pred HHHHHHHHh
Q 013076 425 ASLALRYLL 433 (450)
Q Consensus 425 ~~~~~~l~~ 433 (450)
+.++.+++.
T Consensus 374 ~~~~~~~~~ 382 (383)
T PRK05111 374 RQLIHHFCL 382 (383)
T ss_pred HHHHHHHhc
Confidence 999999864
No 24
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.8e-51 Score=409.59 Aligned_cols=353 Identities=19% Similarity=0.269 Sum_probs=285.9
Q ss_pred HHHHHHHHHhHcCCCCC---cchHHHHHHHHHHHHhcCCceeccc---C--------CceEEEEEcCCCCceEEEEeecc
Q 013076 55 GWMIGIRRKIHQNPELG---YQEFETSQLIRSELDKMGIKYKHPV---A--------VTGVVGFIGTGEPPFVALRADMD 120 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s---~~e~~~~~~l~~~l~~~G~~~~~~~---~--------~~nvva~~~~~~~~~ill~~H~D 120 (450)
++++++|++|++|||+| ++|.++++||+++|+++||++++.. + ++|+++..+.++ |+|+|+||||
T Consensus 6 ~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ill~~HlD 84 (394)
T PRK08651 6 FDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARRGSGN-PHLHFNGHYD 84 (394)
T ss_pred HHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEeCCCC-ceEEEEeeee
Confidence 88999999999999998 6678999999999999999887522 1 245777765444 8999999999
Q ss_pred CCCCcCcCCC---cccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHccc
Q 013076 121 SLPLQEMVEW---EYKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGV 192 (450)
Q Consensus 121 vVp~~~~~~w---~~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~ 192 (450)
|||+++. .| ||+. .++|++||||+ |++++++|+|++.+++.+ +++|.|+|++||| ++.|++++++++.
T Consensus 85 tvp~~~~-~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~~G~~~~~~~~~ 160 (394)
T PRK08651 85 VVPPGEG-WSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGGTGTGYLVEEGK 160 (394)
T ss_pred eecCCCC-ccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccchhHHHHHhccC
Confidence 9998753 24 4554 46899999998 999999999999998764 7999999999999 6689999999765
Q ss_pred ccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccC------
Q 013076 193 LEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREA------ 266 (450)
Q Consensus 193 ~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~------ 266 (450)
. ++|+++..+ +... +.+.. +++|..+++|+++|+++|++.|+.|.|||..+++++.+|++...+..
T Consensus 161 ~-~~d~~i~~~--~~~~-~~i~~----~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~ 232 (394)
T PRK08651 161 V-TPDYVIVGE--PSGL-DNICI----GHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSKYEYD 232 (394)
T ss_pred C-CCCEEEEec--CCCC-CceEE----ecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 4 356666532 2211 12322 35799999999999999999999999999999999999986532111
Q ss_pred -CCCCCceEEEEE--EecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCc
Q 013076 267 -DPLDSQVVTVAK--FQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPT 343 (450)
Q Consensus 267 -~~~~~~t~~i~~--i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 343 (450)
.....++++++. |+||...|+||++|++.+|+|++|+++.++++++|++.++..+.+++++++++. ...+++.
T Consensus 233 ~~~~~~~~~~ig~~~i~gG~~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~i~~----~~~~~~~ 308 (394)
T PRK08651 233 DERGAKPTVTLGGPTVEGGTKTNIVPGYCAFSIDRRLIPEETAEEVRDELEALLDEVAPELGIEVEFEI----TPFSEAF 308 (394)
T ss_pred ccccCCCceeecceeeeCCCCCCccCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhccCCCeeEEE----ecccCCc
Confidence 112456788888 999999999999999999999999999999999999999988777787777765 2233443
Q ss_pred c--CChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHH
Q 013076 344 I--NNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYG 420 (450)
Q Consensus 344 ~--~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~ 420 (450)
. .++++++.+++++++++|.++. +...+|++|+++|.+. +|+++ |||+ ....+|++||+++++++.++
T Consensus 309 ~~~~~~~l~~~~~~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg-----~~~~~H~~~E~i~~~~l~~~ 379 (394)
T PRK08651 309 VTDPDSELVKALREAIREVLGVEPK--KTISLGGTDARFFGAKGIPTVV--YGPG-----ELELAHAPDEYVEVKDVEKA 379 (394)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCCc--eeeecCcccHHHHhhCCCcEEE--ECCC-----ChHhcCCCCceeEHHHHHHH
Confidence 3 3567999999999997787663 4567899999999987 99865 4543 23479999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 013076 421 AALHASLALRYLL 433 (450)
Q Consensus 421 ~~~~~~~~~~l~~ 433 (450)
+++|.+++.++.+
T Consensus 380 ~~i~~~~i~~l~~ 392 (394)
T PRK08651 380 AKVYEEVLKRLAK 392 (394)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999999854
No 25
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=4.1e-51 Score=405.25 Aligned_cols=338 Identities=20% Similarity=0.297 Sum_probs=270.9
Q ss_pred HHHHHhHcCCCCCcch-HHHHHHHHHHHHhcCCceeccc-----CCceEEEEEcCCCCceEEEEeeccCCCCcCcCCCc-
Q 013076 59 GIRRKIHQNPELGYQE-FETSQLIRSELDKMGIKYKHPV-----AVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWE- 131 (450)
Q Consensus 59 ~~l~~l~~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~~-----~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~- 131 (450)
++|++|++|||+++++ .++++||.++|+++|++++... +++|+++.+++.++|+|+|+|||||||+++ ..|.
T Consensus 1 ~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~~~~~i~l~~H~Dtvp~~~-~~w~~ 79 (364)
T TIGR01892 1 EILTKLVAFDSTSFRPNVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPSGAGGLALSGHTDVVPYDD-AAWTR 79 (364)
T ss_pred ChHHHhhCcCCcCCccHHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCCCCCeEEEEcccccccCCC-CcCCC
Confidence 4789999999999865 7999999999999999987532 368999999654458999999999999876 5785
Q ss_pred --cc-cCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEecc
Q 013076 132 --YK-SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHV 204 (450)
Q Consensus 132 --~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~ 204 (450)
|. .+++|++||||+ ||+++++|+|+++|++. .++++|.|+|++||| ++.|++++++++.+ +.|+++.
T Consensus 80 ~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~--- 153 (364)
T TIGR01892 80 DPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAE--QLKKPLHLALTADEEVGCTGAPKMIEAGAG-RPRHAII--- 153 (364)
T ss_pred CCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhc--CcCCCEEEEEEeccccCCcCHHHHHHhcCC-CCCEEEE---
Confidence 54 356899999995 99999999999999875 467899999999999 77899999998653 4676665
Q ss_pred CCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccC-----CC--CCCceEEEE
Q 013076 205 DPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREA-----DP--LDSQVVTVA 277 (450)
Q Consensus 205 ~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~-----~~--~~~~t~~i~ 277 (450)
.+|++.... .+++|..+++|+++|+++|++.|+.|.|||..+++++.+|+++..... .. ...++++++
T Consensus 154 --~ep~~~~~~---~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 228 (364)
T TIGR01892 154 --GEPTRLIPV---RAHKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNIG 228 (364)
T ss_pred --CCCCCceeE---EeeceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEEe
Confidence 234444322 235799999999999999999999999999999999999987642211 11 124799999
Q ss_pred EEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHH-hhCCeEEEEeeccCCCCCCCc--cCChHHHHHHH
Q 013076 278 KFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAA-VQRCSATVDFLSKEKPFFPPT--INNNDLHKYFQ 354 (450)
Q Consensus 278 ~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~--~~d~~~~~~~~ 354 (450)
.|+||...|+||++|++.+|+|++|+++.+++.++|+++++..+. .++++++++. ...+|++ ..|+++++.++
T Consensus 229 ~i~gg~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~v~~~~----~~~~~~~~~~~~~~~v~~~~ 304 (364)
T TIGR01892 229 VIQGGKAVNIIPGACEFVFEWRPIPGMDPEELLQLLETIAQALVRDEPGFEVQIEV----VSTDPGVNTEPDAELVAFLE 304 (364)
T ss_pred eeecCCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhhCCCceEEEEE----ccCCCCcCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999987643 4466666655 2233333 34678888886
Q ss_pred HHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHH
Q 013076 355 TVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASL 427 (450)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~ 427 (450)
+++ |.++ ...+++||+++|... +|++. ||| |+...+|++||+++++++.+++++|..+
T Consensus 305 ~~~----~~~~----~~~~~~tD~~~~~~~gip~v~--~Gp-----g~~~~~H~~~E~i~i~~l~~~~~~~~~~ 363 (364)
T TIGR01892 305 ELS----GNAP----EVVSYGTEAPQFQELGAEAVV--CGP-----GDIRQAHQPDEYVEIEDLVRCRAVLARL 363 (364)
T ss_pred HHh----CCCC----ceecccccHHHHHhCCCcEEE--ECC-----CChHhCCCCCceeeHHHHHHHHHHHHHh
Confidence 653 4433 235678999999877 99765 553 3345799999999999999999999876
No 26
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-50 Score=414.29 Aligned_cols=359 Identities=13% Similarity=0.119 Sum_probs=280.5
Q ss_pred HHHHHHHHHhHcCCCCC--cchHHHHHHHHHHHHhcCCcee---c---ccCCceEEEEEcCC-CCceEEEEeeccCCCCc
Q 013076 55 GWMIGIRRKIHQNPELG--YQEFETSQLIRSELDKMGIKYK---H---PVAVTGVVGFIGTG-EPPFVALRADMDSLPLQ 125 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s--~~e~~~~~~l~~~l~~~G~~~~---~---~~~~~nvva~~~~~-~~~~ill~~H~DvVp~~ 125 (450)
+++++++++|++|||++ ++|.++++||.++|+++||+++ . ..+++||++++++. ++|+|+|+|||||||++
T Consensus 37 ~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~~~~lll~~H~DtVp~~ 116 (472)
T PRK09133 37 QAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDPKKPILLLAHMDVVEAK 116 (472)
T ss_pred HHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCCCCcEEEEeecccCCCC
Confidence 77999999999999998 6788999999999999999753 2 23468999999653 45889999999999986
Q ss_pred CcCCCccc---c-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-C-ccchHHHHHcccc-cc
Q 013076 126 EMVEWEYK---S-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-G-GGGAHKVLEAGVL-EK 195 (450)
Q Consensus 126 ~~~~w~~~---~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g-~~Ga~~l~~~~~~-~~ 195 (450)
+ .+|.++ . ++||+|||||+ ||+++++|.|+++|++.+..++++|.|+|++||| + +.|+++++++... .+
T Consensus 117 ~-~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~~~ 195 (472)
T PRK09133 117 R-EDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWLAENHRDLID 195 (472)
T ss_pred h-hcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHHHHHHhhccC
Confidence 5 468544 2 46899999998 8999999999999998887889999999999999 4 4799999876421 13
Q ss_pred cceEEEeccCC------CCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhccc----
Q 013076 196 VNAIFGLHVDP------NLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRE---- 265 (450)
Q Consensus 196 ~d~~i~~~~~~------~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~---- 265 (450)
.|++|. .... ++|+.. ....++||..+++|+++|+++|+|.|+ +.|||..++++|.+|+++..+.
T Consensus 196 ~~~~i~-e~~~~~~~~~gept~~---~i~~g~kG~~~~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~~~~~~~~~~ 270 (472)
T PRK09133 196 AEFALN-EGGGGTLDEDGKPVLL---TVQAGEKTYADFRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAAYRFPVMLND 270 (472)
T ss_pred eEEEEE-CCCccccCCCCCceEE---EeeeecceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhhCCCCCccCC
Confidence 566665 3211 223221 223467899999999999999999997 5899999999999997642100
Q ss_pred ------------------------------------------CCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCCh
Q 013076 266 ------------------------------------------ADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 303 (450)
Q Consensus 266 ------------------------------------------~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~ 303 (450)
......+|+|++.|+||...|+||++|++.+|+|++|+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~~lDiR~~p~ 350 (472)
T PRK09133 271 VTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATANVNCRIFPG 350 (472)
T ss_pred ccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEEEEEEEeCCc
Confidence 00123579999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhc-CCccccccCCCcccchHHHHh
Q 013076 304 ESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDML-DTQKVKVMAPVMGSEDFSFYQ 382 (450)
Q Consensus 304 ~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-g~~~~~~~~~~~g~tD~~~~~ 382 (450)
++.+++.++|+++++. .+ ++++.... ....++.+.+.++++.+++++++.+ |.++ .+..++|+||++++.
T Consensus 351 ~~~e~v~~~I~~~i~~----~~--v~v~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~g~~~--~~~~~~ggtDa~~~~ 421 (472)
T PRK09133 351 DTIEAVRATLKQVVAD----PA--IKITRIGD-PSPSPASPLRPDIMKAVEKLTAAMWPGVPV--IPSMSTGATDGRYLR 421 (472)
T ss_pred hhHHHHHHHHHHHhcC----CC--EEEEEccC-CCCCCCCCCCcHHHHHHHHHHHHHCCCCce--eccccccccchHHHH
Confidence 9999999999998853 23 34433111 1222344557789999999999887 5443 345678999999998
Q ss_pred hh-cCeEEEE--ecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 383 EV-MPGYFFF--LGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 383 ~~-~p~~~~~--~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
.. +|++.++ ||| +....+|++||||+++++.+++++|..++.++++
T Consensus 422 ~~gip~~~~~~i~gp-----~~~~~aH~~dE~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 422 AAGIPTYGVSGLFGD-----PDDTFAHGLNERIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred hcCCCceeecCcccC-----cccccCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 76 8874321 343 3346799999999999999999999999998864
No 27
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=8.8e-50 Score=395.52 Aligned_cols=346 Identities=16% Similarity=0.142 Sum_probs=271.7
Q ss_pred HHHHHHHHHhHcCCCCCcchH---HHHHHHHHHHHhcCCceeccc---C-CceEEEEEcCC--CCceEEEEeeccCCCCc
Q 013076 55 GWMIGIRRKIHQNPELGYQEF---ETSQLIRSELDKMGIKYKHPV---A-VTGVVGFIGTG--EPPFVALRADMDSLPLQ 125 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~---~~~~~l~~~l~~~G~~~~~~~---~-~~nvva~~~~~--~~~~ill~~H~DvVp~~ 125 (450)
++++++|++|++|||++++|. ++++|+.++|+++|++++... + ..|+++++++. .+|+|+|+|||||||+.
T Consensus 11 ~~~~~~l~~Lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~DtV~~~ 90 (376)
T PRK07473 11 EAMLAGLRPWVECESPTWDAAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDTVHPV 90 (376)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCCCCCC
Confidence 779999999999999999886 677899999999999987632 2 24799998642 35899999999999753
Q ss_pred C-cCCCccccCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEE
Q 013076 126 E-MVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIF 200 (450)
Q Consensus 126 ~-~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i 200 (450)
. ...+||. ++||++||||+ ||+++++|.|+++|++.+..++.+|.|+|++||| |+.|++.+++++.. ..|++|
T Consensus 91 ~~~~~~p~~-~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~~~-~~d~~i 168 (376)
T PRK07473 91 GTLEKLPWR-REGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAEAA-RNKYVL 168 (376)
T ss_pred CCccCCCeE-EECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHhhc-cCCEEE
Confidence 3 2233564 56899999996 9999999999999998877778899999999999 77899999987543 467777
Q ss_pred EeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEE
Q 013076 201 GLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKF 279 (450)
Q Consensus 201 ~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i 279 (450)
+.+ |+...+.+. .+++|..+++|+++|+++|++ .|+.|+|||..+++++.+|+++.. ...++|++.|
T Consensus 169 v~e--p~~~~~~v~----~~~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------~~~~~~vg~i 236 (376)
T PRK07473 169 VPE--PGRPDNGVV----TGRYAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------EDCTFSVGIV 236 (376)
T ss_pred EeC--CCCCCCCEE----EECeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------CCceEeEeeE
Confidence 643 332222332 235799999999999999987 799999999999999999998742 2368999999
Q ss_pred ecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCcc---CChHHHHHHHHH
Q 013076 280 QGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTI---NNNDLHKYFQTV 356 (450)
Q Consensus 280 ~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~d~~~~~~~~~~ 356 (450)
+||...|+||++|++.+++|....+..+++.+++.+.++ ...++++++.. ....|+.. .++++++.++++
T Consensus 237 ~gg~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~ 309 (376)
T PRK07473 237 HGGQWVNCVATTCTGEALSMAKRQADLDRGVARMLALSG---TEDDVTFTVTR----GVTRPVWEPDAGTMALYEKARAI 309 (376)
T ss_pred EcCCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhhC---cCCCeEEEEEc----cccCCCCCCChhHHHHHHHHHHH
Confidence 999999999999999999998887777777777766554 22344555542 11233332 234688888887
Q ss_pred HHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHH
Q 013076 357 AGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRY 431 (450)
Q Consensus 357 ~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l 431 (450)
.+.. |.++ ....++|+||+++|... +|++. ++||+. ..+|++|||++++++.+++++|+.++.++
T Consensus 310 ~~~~-g~~~--~~~~~~g~tDa~~~~~~giP~v~-g~Gpg~------~~~H~~dE~v~i~~l~~~~~vl~~~l~~~ 375 (376)
T PRK07473 310 AGQL-GLSL--PHGSAGGGSDGNFTGAMGIPTLD-GLGVRG------ADYHTLNEHIEVDSLAERGRLMAGLLATL 375 (376)
T ss_pred HHHc-CCCC--ccccCccccHhhhHHhcCCCEEE-eccCCC------CCCCCCCceEecccHHHHHHHHHHHHHhc
Confidence 7665 7665 34567899999999876 99765 677643 35899999999999999999999998654
No 28
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3.7e-50 Score=395.86 Aligned_cols=338 Identities=15% Similarity=0.134 Sum_probs=272.7
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccC--CceEEEEEcCCCCceEEEEeeccCCCCcCcCCCcc
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVA--VTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEY 132 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~--~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~~ 132 (450)
+++++++++|++|||+|++|.++++||.++|+++||+++.... ..|+++ +++|+|+|+|||||||++.. ++
T Consensus 2 ~~~~~~~~~lv~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~----~~~~~i~l~~H~D~vp~~~~---~~ 74 (347)
T PRK08652 2 ERAKELLKQLVKIPSPSGQEDEIALHIMEFLESLGYDVHIESDGEVINIVV----NSKAELFVEVHYDTVPVRAE---FF 74 (347)
T ss_pred hhHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCEEEEEecCceeEEEc----CCCCEEEEEccccccCCCCC---CE
Confidence 5689999999999999999999999999999999999876332 356665 23589999999999997531 21
Q ss_pred ccCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEeccCCCC
Q 013076 133 KSKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNL 208 (450)
Q Consensus 133 ~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~ 208 (450)
.+||++||||+ ||+++++|.|++.|++. ..+++|.|+|++||| ++.|++.++++. +.|+++..+ |.
T Consensus 75 --~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~dEE~g~~G~~~~~~~~---~~d~~i~~e--p~- 144 (347)
T PRK08652 75 --VDGVYVYGTGACDAKGGVAAILLALEELGKE--FEDLNVGIAFVSDEEEGGRGSALFAERY---RPKMAIVLE--PT- 144 (347)
T ss_pred --EECCEEEeccchhhhHHHHHHHHHHHHHhhc--ccCCCEEEEEecCcccCChhHHHHHHhc---CCCEEEEec--CC-
Confidence 45899999998 99999999999999854 346799999999999 778999998752 346666543 32
Q ss_pred CCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCC
Q 013076 209 PIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVI 288 (450)
Q Consensus 209 ~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nvi 288 (450)
.+.+ ..+++|..+++|+++|+++|++.|+.|.|||..+++++.+|+++....... ..++++++.|+||...|+|
T Consensus 145 -~~~i----~~~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~-~~~~~~~~~i~gg~~~nvi 218 (347)
T PRK08652 145 -DLKV----AIAHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKY-FDPHIGIQEIIGGSPEYSI 218 (347)
T ss_pred -CCce----eeecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhcc-cCCCCcceeeecCCCCCcc
Confidence 1222 234689999999999999999999999999999999999998875332111 1246788889999999999
Q ss_pred CCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccc
Q 013076 289 PDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKV 368 (450)
Q Consensus 289 P~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~ 368 (450)
|++|++.+|+|++|.++.+++.++|++++++ +++++++... .+++ ....|+++++.+++++++. |.++ .
T Consensus 219 P~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~v~~~~~~~---~~~~-~~~~~~~lv~~l~~a~~~~-g~~~--~ 287 (347)
T PRK08652 219 PALCRLRLDARIPPEVEVEDVLDEIDPILDE----YTVKYEYTEI---WDGF-ELDEDEEIVQLLEKAMKEV-GLEP--E 287 (347)
T ss_pred CCcEEEEEEEEcCCCCCHHHHHHHHHHHHHh----cCceEEEecc---CCcc-cCCCCCHHHHHHHHHHHHh-CCCC--C
Confidence 9999999999999999999999999999863 3445544321 2222 2356788999999999998 8765 3
Q ss_pred cCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 369 MAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 369 ~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
+..++|+||+++|.+. +|++. ||| |+...+|++|||++++++.+++++|.+++..+++
T Consensus 288 ~~~~~g~tDa~~~~~~gip~v~--~Gp-----g~~~~~H~~nE~i~i~~l~~~~~~l~~~~~~~~~ 346 (347)
T PRK08652 288 FTVMRSWTDAINFRYNGTKTVV--WGP-----GELDLCHTKFERIDVREVEKAKEFLKALNEILLE 346 (347)
T ss_pred cCcCCccchhHHHHHCCCCEEE--ECC-----CchhhcCCCCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 4567889999999887 99865 664 3345799999999999999999999999999875
No 29
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-49 Score=404.52 Aligned_cols=370 Identities=17% Similarity=0.161 Sum_probs=284.8
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcc------hHHHHHHHHHHHHhcCC-ceecc--cCCceEEEEEcCC-CC
Q 013076 41 PKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQ------EFETSQLIRSELDKMGI-KYKHP--VAVTGVVGFIGTG-EP 110 (450)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~------e~~~~~~l~~~l~~~G~-~~~~~--~~~~nvva~~~~~-~~ 110 (450)
.+++.++++++. +++++++++|++|||++++ |.++++||.++|+++|| ++++. ++++|++++++++ ++
T Consensus 6 ~~~~~~~i~~~~--~~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~~~~ 83 (449)
T PRK07907 6 ADDLRARVAELL--PRVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAPPGA 83 (449)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCCCCC
Confidence 457889999988 9999999999999999963 67899999999999998 67653 4678999999754 35
Q ss_pred ceEEEEeeccCCCCcCcCCCcc---cc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc
Q 013076 111 PFVALRADMDSLPLQEMVEWEY---KS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGG 182 (450)
Q Consensus 111 ~~ill~~H~DvVp~~~~~~w~~---~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~ 182 (450)
|+|+|+||+||||+++..+|.+ .. ++||+|||||+ ||+++++|.|+++| +.+++++|.|++++||| |+.
T Consensus 84 ~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~~ 160 (449)
T PRK07907 84 PTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGSP 160 (449)
T ss_pred CEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCCc
Confidence 8999999999999987778854 43 46899999998 99999999999998 33577899999999999 778
Q ss_pred chHHHHHccc-ccccceEEEeccCCCCC-CceEEeecCcccccceEEEEEEE--ecCCCCCC-CCCCCcHHHHHHHHHHH
Q 013076 183 GAHKVLEAGV-LEKVNAIFGLHVDPNLP-IGEVASRPGPLLAGSGFFEAVIG--GKGGHAAI-PQHSIDPILAASNVIVS 257 (450)
Q Consensus 183 Ga~~l~~~~~-~~~~d~~i~~~~~~~~~-~g~~~~~~g~~~~G~~~~~i~v~--G~~~Hss~-p~~g~nAi~~~~~~l~~ 257 (450)
|+++++++.. ..+.|++++.. ++.. .+.-.. ..++||..+++++++ |+++|+|. +..+.||+..+++++.+
T Consensus 161 g~~~~l~~~~~~~~~d~~iv~E--~~~~~~~~p~i--~~~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~ 236 (449)
T PRK07907 161 SLERLLAEHPDLLAADVIVIAD--SGNWSVGVPAL--TTSLRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLAT 236 (449)
T ss_pred cHHHHHHhchHhhcCCEEEEec--CCcCCCCCeEE--EEecCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHh
Confidence 9999988632 12457777643 2221 111111 234789999999998 89999997 46789999999999999
Q ss_pred Hhhhhccc-------CCC---------------------------------CCCceEEEEEEec---CCCCCCCCCeEEE
Q 013076 258 LQHLVSRE-------ADP---------------------------------LDSQVVTVAKFQG---GGAFNVIPDSVLI 294 (450)
Q Consensus 258 l~~~~~~~-------~~~---------------------------------~~~~t~~i~~i~g---G~~~nviP~~a~~ 294 (450)
|++...+. ..+ ...++++++.|+| |.+.|+||++|++
T Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~ 316 (449)
T PRK07907 237 LHDEDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARA 316 (449)
T ss_pred hCCCCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEE
Confidence 97653210 000 2357899999986 4688999999999
Q ss_pred EEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCc--cCChHHHHHHHHHHHhhcCCccccccCCC
Q 013076 295 GGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPT--INNNDLHKYFQTVAGDMLDTQKVKVMAPV 372 (450)
Q Consensus 295 ~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~ 372 (450)
++|+|++|+++.+++.+.|+++++... .++.+++++.. ..++++ +.|+++++.+++++++.+|.++. ....
T Consensus 317 ~~diR~~p~~~~e~v~~~l~~~l~~~~-~~~~~~~~~~~----~~~~p~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~ 389 (449)
T PRK07907 317 RLSLRVAPGQDAAEAQDALVAHLEAHA-PWGAHVTVERG----DAGQPFAADASGPAYDAARAAMREAWGKDPV--DMGM 389 (449)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHhcC-CCCcEEEEEEC----CCcCceeCCCCCHHHHHHHHHHHHHhCCCce--ecCC
Confidence 999999999999999999999987642 22455666542 223333 45788999999999999888763 3345
Q ss_pred cccchH-HHHhhh---cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 373 MGSEDF-SFYQEV---MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 373 ~g~tD~-~~~~~~---~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
+|+++. +.|.+. +|++. +||+.. ...+|++||+|+++++.+++++|++++.+|.
T Consensus 390 ~g~~~~~~~~~~~~~~~~~v~--~Gpg~~----~~~aH~~nE~i~i~~l~~~~~~~~~~l~~~~ 447 (449)
T PRK07907 390 GGSIPFIAELQEAFPQAEILV--TGVEDP----KTRAHSPNESVHLGELERAAVAEALLLARLA 447 (449)
T ss_pred CCcHHHHHHHHHhcCCCcEEE--eccCCC----CCCCcCCCCCcCHHHHHHHHHHHHHHHHHHh
Confidence 555543 344433 45444 564321 1469999999999999999999999998873
No 30
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=6.1e-50 Score=393.49 Aligned_cols=332 Identities=14% Similarity=0.104 Sum_probs=265.6
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCCCCcCcCCCcccc
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKS 134 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~~~~ 134 (450)
+++++++++|++|||++++|.++++||+++|+++|+++++.. ..|++. .+ +|+|+|+||+||||.. ++ ..
T Consensus 10 ~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~-~~~~~~--~g--~~~lll~gH~DtVp~~----~~-~~ 79 (346)
T PRK00466 10 QKAKELLLDLLSIYTPSGNETNATKFFEKISNELNLKLEILP-DSNSFI--LG--EGDILLASHVDTVPGY----IE-PK 79 (346)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEec-CCCcEe--cC--CCeEEEEeccccCCCC----CC-ce
Confidence 678999999999999999999999999999999999988643 356553 22 3789999999999941 22 23
Q ss_pred CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEeccCCCCCC
Q 013076 135 KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPI 210 (450)
Q Consensus 135 ~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~ 210 (450)
++||+|||||+ ||+++++|+|+++|++.+ .+|.|+|++||| ++.|++++++++. ++|+++.. +|+
T Consensus 80 ~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~l~~~~~--~~d~~i~~-----ep~ 148 (346)
T PRK00466 80 IEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTSIGAKELVSKGF--NFKHIIVG-----EPS 148 (346)
T ss_pred eeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCCccHHHHHhcCC--CCCEEEEc-----CCC
Confidence 56899999998 899999999999998765 368999999999 6689999998763 46777653 344
Q ss_pred ceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCC
Q 013076 211 GEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPD 290 (450)
Q Consensus 211 g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~ 290 (450)
+...+ ..+++|..+++|+++|+++|+|.|+ .|||..+++++.+|.++.. .....+++++.|+||...|+||+
T Consensus 149 ~~~~i--~~~~kG~~~~~i~v~G~~~Has~p~--~nAi~~~~~~l~~l~~~~~----~~~~~t~~~~~i~gG~~~NvvP~ 220 (346)
T PRK00466 149 NGTDI--VVEYRGSIQLDIMCEGTPEHSSSAK--SNLIVDISKKIIEVYKQPE----NYDKPSIVPTIIRAGESYNVTPA 220 (346)
T ss_pred CCCce--EEEeeEEEEEEEEEEeeccccCCCC--cCHHHHHHHHHHHHHhccc----cCCCCcceeeEEecCCcCcccCC
Confidence 32111 1236899999999999999999886 5999999999999977532 22356899999999999999999
Q ss_pred eEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccC
Q 013076 291 SVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMA 370 (450)
Q Consensus 291 ~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~ 370 (450)
+|++.+|+|++|+++.++++++|++.++. +++++.. . .+++ ..+.++++++.+.+++++. |.++ .+.
T Consensus 221 ~a~~~~diR~~p~~~~~~v~~~i~~~~~~------~~~~~~~--~-~~~~-~~~~~~~lv~~l~~a~~~~-g~~~--~~~ 287 (346)
T PRK00466 221 KLYLHFDVRYAINNKRDDLISEIKDKFQE------CGLKIVD--E-TPPV-KVSINNPVVKALMRALLKQ-NIKP--RLV 287 (346)
T ss_pred ceEEEEEEEeCCCCCHHHHHHHHHHHHhh------CcEeecc--C-CCCc-ccCCCCHHHHHHHHHHHHh-CCCc--eEE
Confidence 99999999999999999999999988864 2333221 0 2222 2344688999999999986 7765 345
Q ss_pred CCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhh
Q 013076 371 PVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLE 434 (450)
Q Consensus 371 ~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 434 (450)
..+|+||+++|.+..|.+ +.||| |....+|++|||++++++.+++++|..++.++++.
T Consensus 288 ~~~g~tD~~~~~~~~~~~-v~fGp-----g~~~~aH~~nE~i~i~~l~~~~~~~~~~i~~l~~~ 345 (346)
T PRK00466 288 RKAGTSDMNILQKITTSI-ATYGP-----GNSMLEHTNQEKITLDEIYIAVKTYMLAIEELWQK 345 (346)
T ss_pred ecCCcCcHHHHHHhCCCE-EEECC-----CCcccccCCCceeeHHHHHHHHHHHHHHHHHHHhc
Confidence 678999999998874433 24774 34467999999999999999999999999999864
No 31
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=1.7e-49 Score=404.90 Aligned_cols=373 Identities=16% Similarity=0.174 Sum_probs=287.8
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcch------HHHHHHHHHHHHhcCCceec--ccCCceEEEEEcCC--CC
Q 013076 41 PKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQE------FETSQLIRSELDKMGIKYKH--PVAVTGVVGFIGTG--EP 110 (450)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e------~~~~~~l~~~l~~~G~~~~~--~~~~~nvva~~~~~--~~ 110 (450)
..++.++++.++ ++++++|++|++|||+++++ .++++||+++|+++||+++. ..+++||++++++. .+
T Consensus 5 ~~~~~~~~~~~~--~~~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~~ 82 (464)
T PRK09104 5 LDPVLDHIDANL--DASLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGDA 82 (464)
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCC
Confidence 456889999988 99999999999999999754 67899999999999999875 33567999999642 35
Q ss_pred ceEEEEeeccCCCCcCcCCCccc---c-CCCC-----ceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCC
Q 013076 111 PFVALRADMDSLPLQEMVEWEYK---S-KIPG-----KMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAE 178 (450)
Q Consensus 111 ~~ill~~H~DvVp~~~~~~w~~~---~-~~~g-----~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dE 178 (450)
|+|+|+||+||||+++.+.|+++ . .+++ +|||||+ ||+++++|.|+++|++.+..++++|.|+|++||
T Consensus 83 ~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dE 162 (464)
T PRK09104 83 PHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEE 162 (464)
T ss_pred CEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECcc
Confidence 99999999999999877789544 2 2343 5999998 999999999999999877678899999999999
Q ss_pred C-CccchHHHHHccc-ccccceEEEeccCCCCC-CceEEeecCcccccceEEEEEEEe--cCCCCCC-CCCCCcHHHHHH
Q 013076 179 E-GGGGAHKVLEAGV-LEKVNAIFGLHVDPNLP-IGEVASRPGPLLAGSGFFEAVIGG--KGGHAAI-PQHSIDPILAAS 252 (450)
Q Consensus 179 E-g~~Ga~~l~~~~~-~~~~d~~i~~~~~~~~~-~g~~~~~~g~~~~G~~~~~i~v~G--~~~Hss~-p~~g~nAi~~~~ 252 (450)
| |+.|++.++.+.. ...+|++|+..+....+ ...+ ..++||.++++|+++| +++|||. |+.|.||+..++
T Consensus 163 E~g~~g~~~~l~~~~~~~~~d~~iv~E~~~~~~~~~~i----~~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~ 238 (464)
T PRK09104 163 ESGSPSLVPFLEANAEELKADVALVCDTGMWDRETPAI----TTSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLT 238 (464)
T ss_pred ccCCccHHHHHHhhHHhcCCCEEEEeCCCCCCCCCeEE----EeecCCeEEEEEEEEeCCCCccccccCCccCCHHHHHH
Confidence 9 7788888877532 12467777643211001 1122 2357899999999999 7899995 689999999999
Q ss_pred HHHHHHhhhhccc----------------------C--------------CC------------CCCceEEEEEEecCC-
Q 013076 253 NVIVSLQHLVSRE----------------------A--------------DP------------LDSQVVTVAKFQGGG- 283 (450)
Q Consensus 253 ~~l~~l~~~~~~~----------------------~--------------~~------------~~~~t~~i~~i~gG~- 283 (450)
+++.+|++...+. . .+ ...+++|++.|+||.
T Consensus 239 ~~l~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~ 318 (464)
T PRK09104 239 RILAGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYT 318 (464)
T ss_pred HHHHhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCC
Confidence 9999997632110 0 00 124689999999985
Q ss_pred ---CCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCC--ccCChHHHHHHHHHHH
Q 013076 284 ---AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPP--TINNNDLHKYFQTVAG 358 (450)
Q Consensus 284 ---~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~d~~~~~~~~~~~~ 358 (450)
..|+||++|++++|+|++|+++.+++.++|++++++.. ..+.++++.. ....|+ ++.|+++++.+.++++
T Consensus 319 ~~~~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~~l~~~~-~~~~~v~~~~----~~~~~~~~~~~~~~~v~~l~~~~~ 393 (464)
T PRK09104 319 GEGFKTVIPAEASAKVSFRLVGGQDPAKIREAFRAYVRARL-PADCSVEFHD----HGGSPAIALPYDSPALAAAKAALS 393 (464)
T ss_pred CCCCccEecCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEe----cCCCCceECCCCCHHHHHHHHHHH
Confidence 46999999999999999999999999999999987531 1233344332 112233 3557889999999999
Q ss_pred hhcCCccccccCCCcccc-hHHHHhhh--cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 359 DMLDTQKVKVMAPVMGSE-DFSFYQEV--MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 359 ~~~g~~~~~~~~~~~g~t-D~~~~~~~--~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
+.+|.++. ....+|++ |++.|.+. +|++++++|+.. ..+|++||+|++++|.+++++|..++..++
T Consensus 394 ~~~~~~~~--~~~~~g~~~~~~~~~~~~gip~v~~g~G~~~------~~aH~~nE~i~i~~l~~~~~~~~~ll~~~~ 462 (464)
T PRK09104 394 DEWGKPAV--LIGSGGSIPIVGDFKRILGMDSLLVGFGLDD------DRIHSPNEKYDLESFHKGIRSWARILAALA 462 (464)
T ss_pred HHhCCCce--ecCCCCcHHHHHHHHHHhCCCEEEecCCCCC------CCCcCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 98887663 33444544 45666653 898776666432 469999999999999999999999998875
No 32
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-49 Score=406.93 Aligned_cols=366 Identities=14% Similarity=0.151 Sum_probs=279.6
Q ss_pred HHHHHHHHHhHcCCCCCcchH---------HHHHHHHHHHHhcCCceecc-cCCceEEEEEcCC-CC-ceEEEEeeccCC
Q 013076 55 GWMIGIRRKIHQNPELGYQEF---------ETSQLIRSELDKMGIKYKHP-VAVTGVVGFIGTG-EP-PFVALRADMDSL 122 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~---------~~~~~l~~~l~~~G~~~~~~-~~~~nvva~~~~~-~~-~~ill~~H~DvV 122 (450)
++++++|++|++|||+|++|. ++++||.++|+.+|++++.. .+..|+++.+.++ ++ |+|+|+||+|||
T Consensus 44 ~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~~~~~~~ill~gH~DvV 123 (486)
T PRK08262 44 DAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREVVGGHSLLYTWKGSDPSLKPIVLMAHQDVV 123 (486)
T ss_pred HHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEEECCccEEEEEECCCCCCCeEEEECccccc
Confidence 789999999999999998763 48999999999999977642 2346788887443 33 899999999999
Q ss_pred CCcCc--CCC---cccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHccc
Q 013076 123 PLQEM--VEW---EYKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGV 192 (450)
Q Consensus 123 p~~~~--~~w---~~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~ 192 (450)
|+++. ..| ||.. ++||+|||||+ ||+++++|.|++.|++.+.+++++|.|+|++||| ++.|++++++...
T Consensus 124 p~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~~l~ 203 (486)
T PRK08262 124 PVAPGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAELLK 203 (486)
T ss_pred CCCCCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHHHHHH
Confidence 98753 469 5653 46899999996 9999999999999998887889999999999999 7789998876311
Q ss_pred c--cccceEE------Eecc--CCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhh
Q 013076 193 L--EKVNAIF------GLHV--DPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLV 262 (450)
Q Consensus 193 ~--~~~d~~i------~~~~--~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~ 262 (450)
. ...|+++ ..+. ....|++.+ +.+++|..+++|+++|+++|||.|+. .||+..++++|.+|+++.
T Consensus 204 ~~~~~~~~~~~~~~~i~~~~~~~~~~p~~~i----~~~~kG~~~~~i~v~G~~~Hss~p~~-~nai~~l~~~l~~l~~~~ 278 (486)
T PRK08262 204 ERGVRLAFVLDEGGAITEGVLPGVKKPVALI----GVAEKGYATLELTARATGGHSSMPPR-QTAIGRLARALTRLEDNP 278 (486)
T ss_pred HhcCCEEEEEeCCceecccccCCCCceEEee----EEeeeeeEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHHHHhhCC
Confidence 1 1233332 2111 112344433 34468999999999999999999999 999999999999998742
Q ss_pred ccc--------------------------------------------CCCCCCceEEEEEEecCCCCCCCCCeEEEEEEE
Q 013076 263 SRE--------------------------------------------ADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTF 298 (450)
Q Consensus 263 ~~~--------------------------------------------~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idi 298 (450)
.+. ......+|+|++.|+||...|+||++|++.+|+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~~~NvIP~~a~~~~di 358 (486)
T PRK08262 279 LPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSPKDNVLPQRATATVNF 358 (486)
T ss_pred CCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCCccccCCCccEEEEEE
Confidence 100 001235799999999999999999999999999
Q ss_pred ecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchH
Q 013076 299 RAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDF 378 (450)
Q Consensus 299 R~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~ 378 (450)
|++|+++.+++.++|++++++. ++++++.. ....+.+....|+++++.+++++++.+|.... .+...+|+||+
T Consensus 359 R~~p~~~~~~i~~~i~~~~~~~----~~~v~~~~--~~~~~~~~~~~~~~lv~~l~~a~~~~~g~~~~-~~~~~~g~tDa 431 (486)
T PRK08262 359 RILPGDSVESVLAHVRRAVADD----RVEIEVLG--GNSEPSPVSSTDSAAYKLLAATIREVFPDVVV-APYLVVGATDS 431 (486)
T ss_pred EeCCCCCHHHHHHHHHHHhccC----ceEEEEec--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCcc-ccceecccccH
Confidence 9999999999999999998742 33444332 10112233456788999999999998774322 23457799999
Q ss_pred HHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 379 SFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 379 ~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
++|....|.++. +++....||+...+|++||+++++++.+++++|..++.+++.
T Consensus 432 ~~~~~~~p~~~~-~~~~~~gpg~~~~~Ht~dE~i~i~~l~~~~~i~~~~l~~~~~ 485 (486)
T PRK08262 432 RHYSGISDNVYR-FSPLRLSPEDLARFHGTNERISVANYARMIRFYYRLIENAAG 485 (486)
T ss_pred HHHHHhcCCeEE-ECCccCCcccccCCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 999877765442 333322255556899999999999999999999999988763
No 33
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=4.8e-49 Score=387.29 Aligned_cols=334 Identities=15% Similarity=0.135 Sum_probs=264.1
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCCCCcCcCCCcccc
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKS 134 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~~~~ 134 (450)
+++++++++|++|||++++|.++++|+.++|+++||+++... ..|++++++++ +|+|+|+||+||||... |+.
T Consensus 6 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~i~~~~~~-~~~l~~~~H~DtVp~~~----p~~- 78 (348)
T PRK04443 6 LEARELLKGLVEIPSPSGEEAAAAEFLVEFMESHGREAWVDE-AGNARGPAGDG-PPLVLLLGHIDTVPGDI----PVR- 78 (348)
T ss_pred HHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEcCCC-CCEEEEEeeccccCCCC----CcE-
Confidence 679999999999999999999999999999999999987643 46899998543 48999999999999532 443
Q ss_pred CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEeccCCCCCC
Q 013076 135 KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPI 210 (450)
Q Consensus 135 ~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~ 210 (450)
++||++||||+ ||+++++|.|+++| +.+++++|.|++++||| ++.|...++.++. .+|++++.+ |+
T Consensus 79 ~~~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~--~~d~~iv~E-----pt 148 (348)
T PRK04443 79 VEDGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPSSGGARLVADRE--RPDAVIIGE-----PS 148 (348)
T ss_pred eeCCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCChhHHHHHHhcc--CCCEEEEeC-----CC
Confidence 46899999997 99999999999998 34688999999999999 6666666666553 568777642 33
Q ss_pred ceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhc---ccCCCCCCceEEEEEEecCCCCCC
Q 013076 211 GEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVS---READPLDSQVVTVAKFQGGGAFNV 287 (450)
Q Consensus 211 g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~---~~~~~~~~~t~~i~~i~gG~~~nv 287 (450)
+... ...+++|..+++|+++|+++|||.| |+|||..+++++.+|+++.. .....+..+++|++.|+ ...|+
T Consensus 149 ~~~~--i~~~~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~--~~~n~ 222 (348)
T PRK04443 149 GWDG--ITLGYKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVFDQVTPKLVDFD--SSSDG 222 (348)
T ss_pred Cccc--eeeecccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccccccceeeeEEe--cCCCC
Confidence 3111 1234689999999999999999987 79999999999999988643 11123456788999988 45799
Q ss_pred CCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCcccc
Q 013076 288 IPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVK 367 (450)
Q Consensus 288 iP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~ 367 (450)
||++|++.+|+|++|+++.+++.++|++++. +.++++.. . .+++ ....|+++++.+++++++.++. +
T Consensus 223 iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~~------~~~~~~~~--~-~~~~-~~~~~~~~~~~l~~~~~~~~~~-~-- 289 (348)
T PRK04443 223 LTVEAEMTVGLRLPPGLSPEEAREILDALLP------TGTVTFTG--A-VPAY-MVSKRTPLARAFRVAIREAGGT-P-- 289 (348)
T ss_pred CCceEEEEEEEccCCCCCHHHHHHHHHHhCC------CcEEEEec--C-CCce-ecCCCCHHHHHHHHHHHHhcCC-c--
Confidence 9999999999999999999999999999873 22333321 0 2222 2245678999999999998553 3
Q ss_pred ccCCCcccchHHHHhhh--cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHH
Q 013076 368 VMAPVMGSEDFSFYQEV--MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRY 431 (450)
Q Consensus 368 ~~~~~~g~tD~~~~~~~--~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l 431 (450)
.....+|++|+++|.+. +|++. +||+ +...+|++|||+++++|.+++++|..++.++
T Consensus 290 ~~~~~~g~tD~~~~~~~~gip~v~--~Gpg-----~~~~~H~~dE~i~i~~l~~~~~~~~~~~~~l 348 (348)
T PRK04443 290 RLKRKTGTSDMNVVAPAWGCPMVA--YGPG-----DSDLDHTPDEHLPLAEYLRAIAVLTDVLERL 348 (348)
T ss_pred ceeccccCCcHHHHhhhcCCCEEE--ECCC-----CccccCCCcccccHHHHHHHHHHHHHHHhhC
Confidence 23456799999999763 88765 5643 3456899999999999999999999998653
No 34
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=5.8e-49 Score=397.28 Aligned_cols=358 Identities=15% Similarity=0.182 Sum_probs=266.3
Q ss_pred HHHHHHhHcCCCCC------cchHHHHHHHHHHHHhcCCceecc---cCCceEEEEEcCC-C-CceEEEEeeccCCCCcC
Q 013076 58 IGIRRKIHQNPELG------YQEFETSQLIRSELDKMGIKYKHP---VAVTGVVGFIGTG-E-PPFVALRADMDSLPLQE 126 (450)
Q Consensus 58 ~~~l~~l~~ips~s------~~e~~~~~~l~~~l~~~G~~~~~~---~~~~nvva~~~~~-~-~~~ill~~H~DvVp~~~ 126 (450)
++++++|++|||++ ++|.++++||.++|+++||+++.. ++.+|+++++++. + .|+|+|+||+||||+++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~ 81 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEA 81 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCc
Confidence 68999999999998 678999999999999999998763 2568999999653 3 48999999999999865
Q ss_pred cCCCcc---cc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-cchHHHHHccc--ccc
Q 013076 127 MVEWEY---KS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG-GGAHKVLEAGV--LEK 195 (450)
Q Consensus 127 ~~~w~~---~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~-~Ga~~l~~~~~--~~~ 195 (450)
..|.+ .. ++||++||||+ ||+++++|+|+++|++.+..++++|.|+|++||| ++ .|+++++++.. +..
T Consensus 82 -~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~ 160 (426)
T PRK07906 82 -ADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEG 160 (426)
T ss_pred -ccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccc
Confidence 46854 42 56899999998 8999999999999999888889999999999999 44 59999987531 222
Q ss_pred cceEEEeccCC--CCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhccc--------
Q 013076 196 VNAIFGLHVDP--NLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRE-------- 265 (450)
Q Consensus 196 ~d~~i~~~~~~--~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~-------- 265 (450)
.++++...... ..+..........+++|..+++|+++|+++|+|.|+. +|||..+++++.+|+++..+.
T Consensus 161 ~~~ii~e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~p~~-~nAi~~~~~~l~~l~~~~~~~~~~~~~~~ 239 (426)
T PRK07906 161 VTEAISEVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSMVND-DNAVTRLAEAVARIGRHRWPLVLTPTVRA 239 (426)
T ss_pred hheEEECCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhCCCCcccCHHHHH
Confidence 34444321100 0011100111234578999999999999999999864 999999999999997642110
Q ss_pred ------------CCC-------------------CCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHH
Q 013076 266 ------------ADP-------------------LDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIE 314 (450)
Q Consensus 266 ------------~~~-------------------~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~ 314 (450)
.++ ...+|+|++.|+||.+.|+||++|++.+|+|++|+++ +++.+.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~~~-~~i~~~i~ 318 (426)
T PRK07906 240 FLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPGRE-EEFLATVD 318 (426)
T ss_pred HHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCCCc-HHHHHHHH
Confidence 000 0146999999999999999999999999999999886 66666666
Q ss_pred HHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEec
Q 013076 315 EVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLG 393 (450)
Q Consensus 315 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G 393 (450)
+++. ..+++++... .+++ ..+.|+++++.+++++++.++.... .+...+|+||+++|... +|++. ||
T Consensus 319 ~~~~-------~~v~~~~~~~-~~~~-~~~~~~~~v~~l~~a~~~~~~~~~~-~~~~~~ggtDa~~~~~~g~p~~~--~g 386 (426)
T PRK07906 319 ELLG-------PDVEREWVHR-DPAL-ETPFDGPLVDAMNAALLAEDPGARV-VPYMLSGGTDAKAFSRLGIRCYG--FA 386 (426)
T ss_pred HHhC-------CCeEEEEecC-CCCC-CCCCCcHHHHHHHHHHHHHCCCCeE-eeeeecccCcHHHHHhcCCceEE--Ee
Confidence 6542 2344544211 2222 2345788999999999987532211 23456788999999876 77654 56
Q ss_pred ccCCCCC--CCCCCCCCCcccCCCccHHHHHHHHHHHHH
Q 013076 394 MKNETLG--KVESIHSPYFTLNEDALPYGAALHASLALR 430 (450)
Q Consensus 394 ~~~~~pg--~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~ 430 (450)
|.....| ....+|++||++++++|.+++++|+.++.+
T Consensus 387 p~~~~~~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~ 425 (426)
T PRK07906 387 PLRLPPDLDFAALFHGVDERVPVDALRFGVRVLDRFLRT 425 (426)
T ss_pred ccccCccccccccCcCCCCceeHHHHHHHHHHHHHHHHh
Confidence 5321001 125799999999999999999999998865
No 35
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=2e-48 Score=395.59 Aligned_cols=357 Identities=15% Similarity=0.094 Sum_probs=270.7
Q ss_pred HHHHHHhhhhHHHHHHHHHHhHcCCCCCc------------chHHHHHHHHHHHHhcCCceecccCCceEEEEEcC-CCC
Q 013076 44 LLNFAKRQELVGWMIGIRRKIHQNPELGY------------QEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGT-GEP 110 (450)
Q Consensus 44 ~~~~~~~~~~~~~~~~~l~~l~~ips~s~------------~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~-~~~ 110 (450)
+.+++++++ ++++++|++|++|||++. ++.++++|+.++|+++||+++..+ |+++.+.. +++
T Consensus 4 ~~~~i~~~~--~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~~~---~~~~~~~~~~~~ 78 (466)
T TIGR01886 4 FKEEVEARK--DALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGFTTKNFD---NYAGHVEYGAGD 78 (466)
T ss_pred HHHHHHHhH--HHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCCeEEEec---CCceeEEecCCC
Confidence 567788887 999999999999999974 346689999999999999987532 34343322 235
Q ss_pred ceEEEEeeccCCCCcCcCCCc---ccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc
Q 013076 111 PFVALRADMDSLPLQEMVEWE---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGG 182 (450)
Q Consensus 111 ~~ill~~H~DvVp~~~~~~w~---~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~ 182 (450)
|+|+|+||+||||+++ .|. |.. ++||+|||||+ ||+++++|.|+++|++.+.+++++|+|++++||| ++.
T Consensus 79 ~~l~~~gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~ 156 (466)
T TIGR01886 79 ERLGIIGHMDVVPAGE--GWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWV 156 (466)
T ss_pred CEEEEEeecccCCCCC--CCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcc
Confidence 8999999999999974 585 443 56899999998 8999999999999999998899999999999999 778
Q ss_pred chHHHHHcccccccceEEEeccCCCCCC-----ceEE----ee-----------------------------c-------
Q 013076 183 GAHKVLEAGVLEKVNAIFGLHVDPNLPI-----GEVA----SR-----------------------------P------- 217 (450)
Q Consensus 183 Ga~~l~~~~~~~~~d~~i~~~~~~~~~~-----g~~~----~~-----------------------------~------- 217 (450)
|++++++++. .+|+++... +..|. |... .+ .
T Consensus 157 g~~~~~~~~~--~~d~~~~~d--~~~~~~~ge~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~ 232 (466)
T TIGR01886 157 DMDYYFKHEE--TPDFGFSPD--AEFPIINGEKGNFTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEAL 232 (466)
T ss_pred cHHHHHhcCc--CCCEEEECC--CCceeEEEecceEEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHH
Confidence 9999998754 245543321 11110 0000 00 0
Q ss_pred ------Ccccccce---------EEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHH----------hhhhc---------
Q 013076 218 ------GPLLAGSG---------FFEAVIGGKGGHAAIPQHSIDPILAASNVIVSL----------QHLVS--------- 263 (450)
Q Consensus 218 ------g~~~~G~~---------~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l----------~~~~~--------- 263 (450)
-..++|.+ |++|+++|+++|+|.|+.|+|||..|++++.++ +.+..
T Consensus 233 ~~~~~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~ 312 (466)
T TIGR01886 233 KAAYESFLADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGE 312 (466)
T ss_pred HHHHHHHHhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcc
Confidence 01244543 799999999999999999999999999988873 22210
Q ss_pred -----ccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCC
Q 013076 264 -----READPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKP 338 (450)
Q Consensus 264 -----~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~ 338 (450)
.....++.+|+|++.|+||.. | ++|++.+|+|++|+++.+++.++|++.++. ..++++.. ....
T Consensus 313 ~~~~~~~~~~~g~~S~nvgvI~gG~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~~-----~~~v~~~~--~~~~ 381 (466)
T TIGR01886 313 KLGIAFHDELMGDLAMNAGMFDFDHA-N---KESKLLLNFRYPQGTSPETMQKQVLDKFGG-----IVDVTYNG--HFEE 381 (466)
T ss_pred cCCCcccccCcCceEEEeEEEEEecC-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHhc-----ccEEEEec--ccCC
Confidence 011235678999999999965 4 899999999999999999999999998863 12333211 0012
Q ss_pred CCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccH
Q 013076 339 FFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALP 418 (450)
Q Consensus 339 ~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~ 418 (450)
++. .+.++++++.+.+++++++|.++ .+..++|+||+++|...+|..+ +| ||+...+|++||||++++|.
T Consensus 382 P~~-~~~ds~lv~~l~~a~~~v~G~~~--~~~~~~ggTDa~~~~~~i~~gv--~g-----PG~~~~aH~~dE~V~i~el~ 451 (466)
T TIGR01886 382 PHY-VPGSDPLVQTLLKVYEKHTGKKG--HEVIIGGGTYGRLLERGVAYGA--MF-----EGGPDVMHQANEFMMLDDLI 451 (466)
T ss_pred Ccc-cCCCCHHHHHHHHHHHHHhCCCC--ceeeecCccHHHhccccccccc--cc-----CCCCCCccCCCcceEHHHHH
Confidence 221 23467899999999999988765 3456899999999986565433 44 55567899999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 013076 419 YGAALHASLALRYL 432 (450)
Q Consensus 419 ~~~~~~~~~~~~l~ 432 (450)
+++++|..++.+|+
T Consensus 452 ~a~~iy~~~i~~l~ 465 (466)
T TIGR01886 452 LAAAIYAEAIYELA 465 (466)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999986
No 36
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=2.2e-48 Score=385.15 Aligned_cols=340 Identities=19% Similarity=0.183 Sum_probs=276.0
Q ss_pred HHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceeccc------CCceEEEEEcCC-CCceEEEEeeccCCCCcCcCC
Q 013076 57 MIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV------AVTGVVGFIGTG-EPPFVALRADMDSLPLQEMVE 129 (450)
Q Consensus 57 ~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~nvva~~~~~-~~~~ill~~H~DvVp~~~~~~ 129 (450)
+++++++|++|||++++|.++++||+++|+++||+++... +++|+++.++++ ++|+|+|.||+||||+++ .
T Consensus 2 ~~~~~~~l~~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~l~~H~D~V~~~~--~ 79 (361)
T TIGR01883 2 LKKYFLELIQIDSESGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVKFDTIFFCGHMDTVPPGA--G 79 (361)
T ss_pred hHHHHHHHeecCCCCCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCCCCcEEEEeeccccCCCC--C
Confidence 6789999999999999999999999999999999987532 378999999654 358999999999999864 3
Q ss_pred CccccCCCCceecccc-------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEE
Q 013076 130 WEYKSKIPGKMHACGH-------DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFG 201 (450)
Q Consensus 130 w~~~~~~~g~l~GrG~-------kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~ 201 (450)
|. ..+++|++||||+ |++++++|.+++.|++.+ .++++|.|+|++||| ++.|++.+.+.+. ..++.+.
T Consensus 80 ~~-~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~~~~~ 155 (361)
T TIGR01883 80 PE-PVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGLIGMRLFDESKI--TAAYGYC 155 (361)
T ss_pred CC-ceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCchhHhHhChhhc--CcceeEE
Confidence 32 1356799999994 699999999999998865 577899999999999 6689998876432 2455554
Q ss_pred eccCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEe
Q 013076 202 LHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQ 280 (450)
Q Consensus 202 ~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~ 280 (450)
. ++..+.+.+.. +++|..+++|+++|+++|++ .|+.|+||+..+++++.+|+... .....+++++.|+
T Consensus 156 ~--~~~~~~~~i~~----~~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~-----~~~~~~~~i~~i~ 224 (361)
T TIGR01883 156 L--DAPGEVGNIQL----AAPTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGR-----IDEETTANIGSFS 224 (361)
T ss_pred E--eCCCCcceEEe----cCCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccC-----CCCccccccceee
Confidence 3 33223344432 34799999999999999986 79999999999999999986532 1124678999999
Q ss_pred cCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCc--cCChHHHHHHHHHHH
Q 013076 281 GGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPT--INNNDLHKYFQTVAG 358 (450)
Q Consensus 281 gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~d~~~~~~~~~~~~ 358 (450)
||...|+||++|++.+|+|..|..+.+.+.++|++.++..+..+++++++.+. ..++++ ..|+++++.++++++
T Consensus 225 gG~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~lv~~l~~a~~ 300 (361)
T TIGR01883 225 GGVNTNIVQDEQLIVAEARSLSFRKAEAQVQTMRERFEQAAEKYGATLEEETR----LIYEGFKIHPQHPLMNIFKKAAK 300 (361)
T ss_pred cCCccCccCCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEE----eccccccCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999887777877777652 233343 446789999999998
Q ss_pred hhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHH
Q 013076 359 DMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLA 428 (450)
Q Consensus 359 ~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~ 428 (450)
+. |.++. ...++|+||+++|... +|++++|+| . ..+|++||+++++++..++++|..++
T Consensus 301 ~~-g~~~~--~~~~~g~tD~~~~~~~giP~v~~G~g-------~-~~~Hs~~E~v~i~~~~~~~~~~~~~~ 360 (361)
T TIGR01883 301 KI-GLKTS--EIFSGGGSDANVLNEKGVPTVNLSAG-------Y-VHAHTEKETISIEQLVKLAELVIALA 360 (361)
T ss_pred Hc-CCCcE--EEecCcccHHHHHhhCCCceEEECCC-------c-ccCcCcceeEEHHHHHHHHHHHHHHh
Confidence 85 87653 3567899999999976 998775433 2 36999999999999999999999875
No 37
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.8e-48 Score=382.56 Aligned_cols=333 Identities=16% Similarity=0.150 Sum_probs=253.8
Q ss_pred HHHHHHHHHhHcCCCCC----cchHHHHHHHHHHHHhcCCceecc---cCCceEEEEEcCCCCceEEEEeeccCCCCcCc
Q 013076 55 GWMIGIRRKIHQNPELG----YQEFETSQLIRSELDKMGIKYKHP---VAVTGVVGFIGTGEPPFVALRADMDSLPLQEM 127 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s----~~e~~~~~~l~~~l~~~G~~~~~~---~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~ 127 (450)
++++++|++|++|||.+ ++|.++++|+.++|+ |+++++. .+++|+++..+ +|+|+|+||+||||+++
T Consensus 6 ~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~g---~~~lll~gH~DtVp~~~- 79 (364)
T PRK08737 6 ESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVRG---TPKYLFNVHLDTVPDSP- 79 (364)
T ss_pred HHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEcC---CCeEEEEeeeCCCCCCC-
Confidence 66899999999999985 357899999999997 9987753 24568998642 37899999999999864
Q ss_pred CCCc---cc-cCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-cchHHHHHcccccccce
Q 013076 128 VEWE---YK-SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG-GGAHKVLEAGVLEKVNA 198 (450)
Q Consensus 128 ~~w~---~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~-~Ga~~l~~~~~~~~~d~ 198 (450)
.|. |. .++||+|||||+ ||+++++|.|++. +.++|.|+|++||| ++ .|++.+++.+. +.|+
T Consensus 80 -~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~~~~ 149 (364)
T PRK08737 80 -HWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--PYEA 149 (364)
T ss_pred -CCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--CCCE
Confidence 685 43 256899999998 8999999988863 35789999999999 65 68899988764 4577
Q ss_pred EEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCC-CCCCcHHHHHHHHHHHHhhhhccc----CCCCCCce
Q 013076 199 IFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIP-QHSIDPILAASNVIVSLQHLVSRE----ADPLDSQV 273 (450)
Q Consensus 199 ~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p-~~g~nAi~~~~~~l~~l~~~~~~~----~~~~~~~t 273 (450)
+++. +|++.. ...+++|..+++|+++|+++|+|.| +.|+|||..+++++.++.+..... .+.....+
T Consensus 150 ~iv~-----Ept~~~---~~~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~~t 221 (364)
T PRK08737 150 VLVA-----EPTMSE---AVLAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLAHARFGGLTGLR 221 (364)
T ss_pred EEEc-----CCCCce---eEEecceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhhhhccCCCCCCc
Confidence 7653 344321 1245789999999999999999998 589999999999998876543211 12234569
Q ss_pred EEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCC-hHHHHH
Q 013076 274 VTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINN-NDLHKY 352 (450)
Q Consensus 274 ~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d-~~~~~~ 352 (450)
+|++.|+||.+.|+||++|++++|+|+.|+++.+++.++|++.++.. ...++..+. .+.+++...+ .+++..
T Consensus 222 ~~vg~i~GG~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~ 294 (364)
T PRK08737 222 FNIGRVEGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAEPA----AATFEETFR---GPSLPSGDIARAEERRL 294 (364)
T ss_pred eEEeeEecCCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHHHc----CCceEEEec---cCCCCCcccCcchHHHH
Confidence 99999999999999999999999999999999999999998776531 233333331 2344444322 245544
Q ss_pred H-HHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHH
Q 013076 353 F-QTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLAL 429 (450)
Q Consensus 353 ~-~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~ 429 (450)
+ +++.++ .|.+. ....+++||+++|... +|+++ +|| |+...+|++||||++++|.+++++|..++.
T Consensus 295 ~~~~~~~~-~~~~~---~~~~~~~tDa~~~~~~Gip~v~--~Gp-----G~~~~aHt~dE~i~i~~l~~~~~~~~~~~~ 362 (364)
T PRK08737 295 AARDVADA-LDLPI---GNAVDFWTEASLFSAAGYTALV--YGP-----GDIAQAHTADEFVTLDQLQRYAESVHRIIN 362 (364)
T ss_pred HHHHHHhh-hcCCC---CceeccccCHHHHHHcCCCEEE--ECC-----CChhhccCCCcceeHHHHHHHHHHHHHHhc
Confidence 4 444443 36543 2345679999999876 99876 453 334679999999999999999999998865
No 38
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=2.7e-48 Score=384.77 Aligned_cols=333 Identities=18% Similarity=0.174 Sum_probs=250.7
Q ss_pred HHHHhHcCCCCCcchHHHHHHHHHHHHhcCCc-eecccCCceEEEEEcCCCCceEEEEeeccCCCCcC--cCCCccc---
Q 013076 60 IRRKIHQNPELGYQEFETSQLIRSELDKMGIK-YKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQE--MVEWEYK--- 133 (450)
Q Consensus 60 ~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~~~--~~~w~~~--- 133 (450)
+|++|++|||++++|.++++||.++|+++|++ ++....+.||+++++++++|+|+|+|||||||+++ ...|.++
T Consensus 1 ll~~Lv~ipS~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~~nvva~~~~~~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~ 80 (373)
T TIGR01900 1 LLQQIMDIFSPSDHEGPIADEIEAALNNLELEGLEVFRFGDNVLARTDFGKASRVILAGHIDTVPIADNFPPKWLEPGDS 80 (373)
T ss_pred ChHHHhCCCCCCchHHHHHHHHHHHHhhccccCceEEEECCEEEEecCCCCCCeEEEeCccccccCCCCChhhhccCccc
Confidence 47899999999999999999999999999653 22111245999998654468999999999999874 2457431
Q ss_pred ---------cCCCCceecccc---hHHHHHHHHHHHHHHh--ccccCCceEEEEEecCCC-Cc--cchHHHHHccc-ccc
Q 013076 134 ---------SKIPGKMHACGH---DGHVTMLLGAAKILQE--HREELKGTVVLVFQPAEE-GG--GGAHKVLEAGV-LEK 195 (450)
Q Consensus 134 ---------~~~~g~l~GrG~---kg~~a~~l~a~~~l~~--~~~~~~~~i~~~~~~dEE-g~--~Ga~~l~~~~~-~~~ 195 (450)
.++||+|||||+ ||+++++|+|+++|++ .+..++++|.|+|++||| ++ .|+++++++.. +.+
T Consensus 81 ~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~ 160 (373)
T TIGR01900 81 LIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLA 160 (373)
T ss_pred ccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhCccccc
Confidence 356899999998 8999999999999954 345678999999999999 43 59999988642 124
Q ss_pred cceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccC--C-CCCCc
Q 013076 196 VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREA--D-PLDSQ 272 (450)
Q Consensus 196 ~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~--~-~~~~~ 272 (450)
+|++|+.+ |++. ....+++|..+++|+++|+++|+|.|+.|.|||..+++++.+|+++..... + ....+
T Consensus 161 ~d~~iv~E-----pt~~---~i~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~ 232 (373)
T TIGR01900 161 ADFAIIGE-----PTGG---GIEAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVNIDGLDYRE 232 (373)
T ss_pred CCEEEEEC-----CCCC---cccccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhcccccccCCcccc
Confidence 67666532 2221 112346899999999999999999999999999999999999988753221 1 12247
Q ss_pred eEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHH--------HHHh---hC-CeEEEEeeccCCCCC
Q 013076 273 VVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIG--------QAAV---QR-CSATVDFLSKEKPFF 340 (450)
Q Consensus 273 t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~--------~~~~---~~-~~~~i~~~~~~~~~~ 340 (450)
++|++.|+||.+.|+||++|++++|+|+.|+++.+++.++|+++++. .... .+ ..++++.... .+..
T Consensus 233 t~~v~~I~GG~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 311 (373)
T TIGR01900 233 GLNATFCEGGKANNVIPDEARMHLNFRFAPDKDLAEAKALMMGADAGAELGNGEHVAEGGEFDGQDGIEIAMEDE-AGGA 311 (373)
T ss_pred eEEEEEEeCCCCCcccCCeEEEEEEEecCCCcCHHHHHHHHHhhhhhhhhhHHHHHHhhccccccccceEEEccc-CCCC
Confidence 89999999999999999999999999999999999999999765432 2111 01 1233332100 1111
Q ss_pred CCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccC
Q 013076 341 PPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLN 413 (450)
Q Consensus 341 ~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~ 413 (450)
....+.++++.+.+++++++|.++. ...|+||+++|... +|+++ ||| |+..++|++||||.
T Consensus 312 -~~~~~~~~~~~~~~a~~~~~~~~~~----~~~g~tD~~~~~~~gip~v~--~Gp-----g~~~~aH~~dE~v~ 373 (373)
T TIGR01900 312 -LPGLGAPLAQDLIDAVGEEKGRDPL----AKFGWTDVARFSALGIPALN--FGA-----GDPLFAHKHDEQCP 373 (373)
T ss_pred -CCCCCCHHHHHHHHHHHhccCCCcc----cccCCccHHHHHhcCCCEEE--eCC-----CChhhccCCCCCCC
Confidence 1234678899999999998777652 26788999999866 89876 564 34567999999984
No 39
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=4.1e-48 Score=381.93 Aligned_cols=333 Identities=18% Similarity=0.215 Sum_probs=263.8
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhc-CCceecccCCceEEEEEcCCCCceEEEEeeccCCCCcCcCCCccc
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKM-GIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYK 133 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~~~ 133 (450)
+++++++++|++|||+|++|.++++||+++|+++ |+++... +.|++++++++++++|+|+|||||||+++ .+++.
T Consensus 7 ~~~~~~l~~li~ips~s~~e~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~i~l~~H~Dtvp~~~--~~~~~ 82 (352)
T PRK13007 7 ADLAELTAALVDIPSVSGDEKALADAVEAALRALPHLEVIRH--GNSVVARTDLGRPSRVVLAGHLDTVPVAD--NLPSR 82 (352)
T ss_pred HHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHhCcCceEEec--CCeEEEEccCCCCCeEEEEccccccCCCC--CCCcc
Confidence 6799999999999999999999999999999996 9887643 46899999655457899999999999865 34443
Q ss_pred cCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc--cchHHHHHcc-cccccceEEEeccCC
Q 013076 134 SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG--GGAHKVLEAG-VLEKVNAIFGLHVDP 206 (450)
Q Consensus 134 ~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~--~Ga~~l~~~~-~~~~~d~~i~~~~~~ 206 (450)
.+||++||||+ |+++|++|.|+++|. +++++|.|+|++||| ++ .|++.++++. .+.++|++++.+ |
T Consensus 83 -~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~e--p 155 (352)
T PRK13007 83 -REGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWLAGDFAILLE--P 155 (352)
T ss_pred -eeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhcccccCCCEEEEec--C
Confidence 56899999998 899999999999983 467899999999999 44 5888888753 223568877653 2
Q ss_pred CCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccC---CCCCCceEEEEEEecCC
Q 013076 207 NLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREA---DPLDSQVVTVAKFQGGG 283 (450)
Q Consensus 207 ~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~---~~~~~~t~~i~~i~gG~ 283 (450)
. .+.+. .+++|..+++|+++|+++|+|.|+.|+||+..+++++.+++++..+.. ......+++++.|+||.
T Consensus 156 ~--~~~i~----~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~gG~ 229 (352)
T PRK13007 156 T--DGVIE----AGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVVDGLTYREGLNAVRISGGV 229 (352)
T ss_pred C--CCceE----eeccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccccCCCCccceeEeEeEecCC
Confidence 2 12222 235799999999999999999999999999999999999988753321 11224689999999999
Q ss_pred CCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCC
Q 013076 284 AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDT 363 (450)
Q Consensus 284 ~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~ 363 (450)
..|+||++|++.+|+|++|+++.+++.++|++.++.. . ++++.. . .++++. ..++++++.+.+++ |.
T Consensus 230 ~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~----~-~~~~~~--~-~~~~~~-~~~~~~~~~~~~~~----g~ 296 (352)
T PRK13007 230 AGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFDGF----A-EVEVTD--L-APGARP-GLDHPAAAALVAAV----GG 296 (352)
T ss_pred cCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhccc----c-EEEeec--c-cCCCCC-CCCCHHHHHHHHHh----CC
Confidence 9999999999999999999999999999999887643 1 343322 1 233322 34677788777753 54
Q ss_pred ccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHH
Q 013076 364 QKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLA 428 (450)
Q Consensus 364 ~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~ 428 (450)
.+ ....|++|++++... +|++. +|| |+...+|++||+++++++.+++++|..++
T Consensus 297 ~~----~~~~g~td~~~~~~~Gip~v~--~Gp-----g~~~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 297 EV----RAKYGWTDVARFSALGIPAVN--FGP-----GDPALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred CC----ccccccchHHHHHhCCCCEEE--eCC-----CchhhccCCCCceEHHHHHHHHHHHHHHh
Confidence 33 235788999999877 89765 564 33467999999999999999999999875
No 40
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-47 Score=391.38 Aligned_cols=370 Identities=13% Similarity=0.082 Sum_probs=275.3
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcc---hHHHHHHHH----HHHHhcCCceecc-----cCCceEEEEEcCC-
Q 013076 42 KKLLNFAKRQELVGWMIGIRRKIHQNPELGYQ---EFETSQLIR----SELDKMGIKYKHP-----VAVTGVVGFIGTG- 108 (450)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~---e~~~~~~l~----~~l~~~G~~~~~~-----~~~~nvva~~~~~- 108 (450)
+++.++++. ++++++|++|++|||+|++ +.++++|++ ++|+++||+++.. .+++||++.++++
T Consensus 8 ~~~~~~~~~----~~~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~~ 83 (469)
T PRK07079 8 ARAAAYFDS----GAFFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAERIEDD 83 (469)
T ss_pred HHHHHhhcc----HHHHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCCC
Confidence 345555554 4689999999999999974 346776664 5899999998752 2467999998654
Q ss_pred CCceEEEEeeccCCCCcCcCCCc-----cc-cCCCCceecccc---hHHHHHHHHHHHHHHhc-cccCCceEEEEEecCC
Q 013076 109 EPPFVALRADMDSLPLQEMVEWE-----YK-SKIPGKMHACGH---DGHVTMLLGAAKILQEH-REELKGTVVLVFQPAE 178 (450)
Q Consensus 109 ~~~~ill~~H~DvVp~~~~~~w~-----~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~-~~~~~~~i~~~~~~dE 178 (450)
++|+|+|+||+||||+++ ..|+ |. .++||++||||+ ||+++++|+|++++++. +.+++++|.|++++||
T Consensus 84 ~~~~lll~gH~DvVp~~~-~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~dE 162 (469)
T PRK07079 84 ALPTVLIYGHGDVVRGYD-EQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKLLIEMGE 162 (469)
T ss_pred CCCEEEEEcccCCCCCCh-HHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECcc
Confidence 458999999999999753 4575 34 357899999998 99999999999998654 4678899999999999
Q ss_pred C-CccchHHHHHccc-ccccceEEEeccCCCCC-CceEEeecCcccccceEEEEEEEec--CCCCCCCCC--CCcHHHHH
Q 013076 179 E-GGGGAHKVLEAGV-LEKVNAIFGLHVDPNLP-IGEVASRPGPLLAGSGFFEAVIGGK--GGHAAIPQH--SIDPILAA 251 (450)
Q Consensus 179 E-g~~Ga~~l~~~~~-~~~~d~~i~~~~~~~~~-~g~~~~~~g~~~~G~~~~~i~v~G~--~~Hss~p~~--g~nAi~~~ 251 (450)
| |+.|+++++++.. ..+.|++|+.. +... .+... ...++||.++++|+++|+ +.||+ ++. +.||+..+
T Consensus 163 E~g~~G~~~l~~~~~~~~~~d~~iv~e--~~~~~~~~~~--i~~g~kG~~~~~v~v~G~~~~~hs~-~~~g~~~nai~~l 237 (469)
T PRK07079 163 EIGSPGLAEVCRQHREALAADVLIASD--GPRLSAERPT--LFLGSRGAVNFRLRVNLRDGAHHSG-NWGGLLRNPGTVL 237 (469)
T ss_pred ccCCccHHHHHHHhHHhcCCCEEEEeC--CCccCCCCeE--EEEecceEEEEEEEEeeCCCCCCCC-ccccccCCHHHHH
Confidence 9 7899999998642 12367777643 2211 01111 123578999999999997 44665 344 47999999
Q ss_pred HHHHHHHhhhhccc----------------------C----------------------CCCCCceEEEEEEecCC---C
Q 013076 252 SNVIVSLQHLVSRE----------------------A----------------------DPLDSQVVTVAKFQGGG---A 284 (450)
Q Consensus 252 ~~~l~~l~~~~~~~----------------------~----------------------~~~~~~t~~i~~i~gG~---~ 284 (450)
+++|.++.+...+. . ..+..+|+|++.|+||. .
T Consensus 238 ~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~~~~ 317 (469)
T PRK07079 238 AHAIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNPDAP 317 (469)
T ss_pred HHHHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecCCCCCc
Confidence 99999985421000 0 01234689999999994 5
Q ss_pred CCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCC--ccCChHHHHHHHHHHHhhcC
Q 013076 285 FNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPP--TINNNDLHKYFQTVAGDMLD 362 (450)
Q Consensus 285 ~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~g 362 (450)
.|+||++|++.+|+|++|+++.++++++|+++++... ...+++++. ...++ .+.|+++++.+.+++++.+|
T Consensus 318 ~NvVP~~a~~~vdiR~~P~~~~e~v~~~l~~~i~~~~---~~~v~~~~~----~~~~p~~~~~~~~~v~~l~~a~~~~~g 390 (469)
T PRK07079 318 VNAIPGSARAVCQLRFVVGTDWENLAPHLRAHLDAHG---FPMVEVTVE----RGSPATRLDPDDPWVRWALASIARTTG 390 (469)
T ss_pred ceEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcC---CCCeEEEEe----CCCCceecCCCCHHHHHHHHHHHHHhC
Confidence 8999999999999999999999999999999987631 112455442 22333 34578899999999999888
Q ss_pred CccccccCCCcccchHHHHhh-h-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhhc
Q 013076 363 TQKVKVMAPVMGSEDFSFYQE-V-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEF 435 (450)
Q Consensus 363 ~~~~~~~~~~~g~tD~~~~~~-~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~ 435 (450)
.++.. ....+|++|+++|.. . +|++++ |+.. || ..+|++||||+++++.+++++|..++.++++..
T Consensus 391 ~~~~~-~~~~~g~~d~~~~~~~~giP~v~~--g~~~--~~--~~~H~~dE~v~l~~l~~~~~~~~~~~~~~~~~~ 458 (469)
T PRK07079 391 KKPAL-LPNLGGSLPNDVFADILGLPTLWV--PHSY--PA--CSQHAPNEHLLASVAREGLQIMAGLFWDLGEQG 458 (469)
T ss_pred CCCce-ecCCCcchhHHHHHHHhCCCEEEe--cCCC--CC--ccCcCCCCCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 76531 223566779888875 3 898753 4332 33 247999999999999999999999999998653
No 41
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=2.3e-47 Score=382.78 Aligned_cols=348 Identities=17% Similarity=0.172 Sum_probs=273.2
Q ss_pred HHHHHHHhHcCCCCCc----------chHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC-CC-ceEEEEeeccCCCC
Q 013076 57 MIGIRRKIHQNPELGY----------QEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG-EP-PFVALRADMDSLPL 124 (450)
Q Consensus 57 ~~~~l~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~-~~-~~ill~~H~DvVp~ 124 (450)
+++.|.+|++|||+|+ ++.++++||.++|+++|++....++.+||+|+++++ ++ |+|+|+||+||||+
T Consensus 3 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp~ 82 (404)
T PRK13381 3 LTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVDV 82 (404)
T ss_pred HHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCCc
Confidence 6788999999999997 467899999999999999654455688999999654 44 89999999999998
Q ss_pred cCcC--CC---ccc------------------------cCCCCceecccc-------hHHHHHHHHHHHHHHhccccCCc
Q 013076 125 QEMV--EW---EYK------------------------SKIPGKMHACGH-------DGHVTMLLGAAKILQEHREELKG 168 (450)
Q Consensus 125 ~~~~--~w---~~~------------------------~~~~g~l~GrG~-------kg~~a~~l~a~~~l~~~~~~~~~ 168 (450)
+... .| +|+ ...+|++||||+ ||++|++|.|+++|++.+ .+++
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g 161 (404)
T PRK13381 83 GLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE-VEHG 161 (404)
T ss_pred cCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC-CCCC
Confidence 6521 11 121 024678999995 899999999999998774 5688
Q ss_pred eEEEEEecCCC-CccchHHHHHcccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCCCCc
Q 013076 169 TVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQHSID 246 (450)
Q Consensus 169 ~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~~g~n 246 (450)
+|.|+|++||| ++.|+++++.+++ ..|++++.+. +++. .+.. .++|..|++|+++|+++|++ .|+.|.|
T Consensus 162 ~i~~~~~~dEE~g~~G~~~~~~~~~--~~d~~~~~~~--~~~~-~i~~----~~~G~~~~~v~v~Gk~aHa~~~p~~g~N 232 (404)
T PRK13381 162 DIVVAFVPDEEIGLRGAKALDLARF--PVDFAYTIDC--CELG-EVVY----ENFNAASAEITITGVTAHPMSAKGVLVN 232 (404)
T ss_pred CEEEEEEcccccccccHHHHHHhcC--CCCEEEEecC--CCcc-eEEE----ecCcceEEEEEEEeEecCCCCCcccCcC
Confidence 99999999999 6689999987643 3677776543 3343 3322 35799999999999999988 5899999
Q ss_pred HHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhC-
Q 013076 247 PILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQR- 325 (450)
Q Consensus 247 Ai~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~- 325 (450)
||..+++++.+|+++..+........+++++.|+|+ |++|++.+|+|+.|+++.+++.++|++.+++.+..++
T Consensus 233 AI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g~------p~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~ 306 (404)
T PRK13381 233 PILMANDFISHFPRQETPEHTEGREGYIWVNDLQGN------VNKAKLKLIIRDFDLDGFEARKQFIEEVVAKINAKYPT 306 (404)
T ss_pred HHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEeC------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999887433322223346888888764 8999999999999999999999999999999877666
Q ss_pred CeEEEEeeccCCC-CCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCC
Q 013076 326 CSATVDFLSKEKP-FFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVE 403 (450)
Q Consensus 326 ~~~~i~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~ 403 (450)
+++++++... .. .......|+++++.+++++++. |.++. ...++|++|+++|... +|++++|+|. .
T Consensus 307 ~~~~~~~~~~-~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~~GpG~--------~ 374 (404)
T PRK13381 307 ARVSLTLTDQ-YSNISNSIKDDRRAVDLAFDAMKEL-GIEPK--VIPMRGGTDGAALSAKGLPTPNLFTGA--------H 374 (404)
T ss_pred cEEEEEEEeC-CchhhcccccCHHHHHHHHHHHHHc-CCCee--eccCCccchHHHHhcCCCCeEEECccc--------c
Confidence 5666654211 11 1112456789999999999875 77653 3467899999999876 9998865442 3
Q ss_pred CCCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 404 SIHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 404 ~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
.+|++||||++++|.+++++|..++.++.
T Consensus 375 ~aH~~dE~v~i~~l~~~~~v~~~~~~~~~ 403 (404)
T PRK13381 375 NFHSRFEFLPVSSFVKSYEVTITICLLAA 403 (404)
T ss_pred CCcCcceeEEHHHHHHHHHHHHHHHHHhc
Confidence 49999999999999999999999988764
No 42
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-47 Score=381.99 Aligned_cols=361 Identities=22% Similarity=0.305 Sum_probs=281.4
Q ss_pred HHHHHHHHHhHcCCCCC-cchHHHHHHHHHHHHhcCCceeccc-C----CceEEEEEcCCCC-ceEEEEeeccCCCCcCc
Q 013076 55 GWMIGIRRKIHQNPELG-YQEFETSQLIRSELDKMGIKYKHPV-A----VTGVVGFIGTGEP-PFVALRADMDSLPLQEM 127 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s-~~e~~~~~~l~~~l~~~G~~~~~~~-~----~~nvva~~~~~~~-~~ill~~H~DvVp~~~~ 127 (450)
+++++++++|++|||++ .++.++++|++++|+++|+.++... + .+|++++++++.+ |+|+|+||+||||+++.
T Consensus 13 ~~~~~~l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~~~l~l~~H~DvVP~g~~ 92 (409)
T COG0624 13 DDILELLKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGGPTLLLGGHLDVVPAGGG 92 (409)
T ss_pred HHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCCCeEEEeccccccCCCCc
Confidence 77889999999999999 8899999999999999999877532 2 4599999987654 99999999999999987
Q ss_pred CCCc---cc-cCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccc---ccc
Q 013076 128 VEWE---YK-SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVL---EKV 196 (450)
Q Consensus 128 ~~w~---~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~---~~~ 196 (450)
.+|. |. ..+||+|||||+ ||++++++.|++.+.+.+..++++|.+++++||| ++.|+..++.++.. ..+
T Consensus 93 ~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~~~~~~~~~~~~ 172 (409)
T COG0624 93 EDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYLEEGEEALGIRP 172 (409)
T ss_pred ccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHHHhcchhhccCC
Confidence 8895 44 345789999998 9999999999999999888899999999999999 67888888876532 356
Q ss_pred ceEEEeccCCC--CCCceEEeecCcccccceEEEEEEEecCCCCCC--CCCCCc----HHHHHHHHHHHHhhhhcccCCC
Q 013076 197 NAIFGLHVDPN--LPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAI--PQHSID----PILAASNVIVSLQHLVSREADP 268 (450)
Q Consensus 197 d~~i~~~~~~~--~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~--p~~g~n----Ai~~~~~~l~~l~~~~~~~~~~ 268 (450)
|+++.. ++. ...+..... +++|..+++|+++|+++|+|. |+.+.| |+..+++++..+.++.....+.
T Consensus 173 d~~i~~--E~~~~~~~~~~~~~---~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~~~~ 247 (409)
T COG0624 173 DYEIVG--EPTLESEGGDIIVV---GHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEGFDG 247 (409)
T ss_pred CEEEeC--CCCCcccCCCeEEE---cceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhcccccccccC
Confidence 766654 331 122322222 468999999999999999998 999999 5555555555555443222111
Q ss_pred CCCceEEEEEEecCCC--------CCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCC
Q 013076 269 LDSQVVTVAKFQGGGA--------FNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFF 340 (450)
Q Consensus 269 ~~~~t~~i~~i~gG~~--------~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~ 340 (450)
..+++++.+.++.. .|+||++|++.+|+|+.|..+.+++.++|++.++......++.+++... .....
T Consensus 248 --~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~--~~~~~ 323 (409)
T COG0624 248 --PLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAPKEGVEYEIEPG--LGEPP 323 (409)
T ss_pred --CccccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccccCceEEeccc--cCCcc
Confidence 46677776666654 5999999999999999999999999999999998765434555555420 02223
Q ss_pred CCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHH
Q 013076 341 PPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPY 419 (450)
Q Consensus 341 ~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~ 419 (450)
.+.+.++++++.+.+++++.+|.++ .....++++|+.++... +| +..|||+ ....+|++|||++++++.+
T Consensus 324 ~~~~~~~~~v~~l~~~~~~~~g~~~--~~~~~G~~~da~~~~~~~~~--~~~fgp~-----~~~~~H~~~E~v~i~~l~~ 394 (409)
T COG0624 324 LPVPGDSPLVAALAEAAEELLGLPP--EVSTGGGTHDARFFARLGIP--AVIFGPG-----DIGLAHQPNEYVELEDLVK 394 (409)
T ss_pred ccCCCchHHHHHHHHHHHHhhCCCc--eecCCCCcchHHHHHhcCCe--eEEECCC-----CcccccCCCceeeHHHHHH
Confidence 3445678899999999999778763 33455577999999888 57 3457754 3468999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 013076 420 GAALHASLALRYLL 433 (450)
Q Consensus 420 ~~~~~~~~~~~l~~ 433 (450)
++++|+.++.+++.
T Consensus 395 ~~~~~~~~l~~l~~ 408 (409)
T COG0624 395 GAKVLARLLYELAE 408 (409)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999874
No 43
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=2.5e-47 Score=388.61 Aligned_cols=360 Identities=17% Similarity=0.177 Sum_probs=271.6
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhHcCCCCCcc------------hHHHHHHHHHHHHhcCCceecccCCceEEEEEc-CCC
Q 013076 43 KLLNFAKRQELVGWMIGIRRKIHQNPELGYQ------------EFETSQLIRSELDKMGIKYKHPVAVTGVVGFIG-TGE 109 (450)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~------------e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~-~~~ 109 (450)
++.+++++++ ++++++|++|++|||++++ +.++++|+.++|+++||+++.. .|+++++. ++.
T Consensus 4 ~~~~~~~~~~--~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~---~n~~~~~~~~~~ 78 (466)
T PRK07318 4 DWKKEVEKRK--DDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNV---DNYAGHIEYGEG 78 (466)
T ss_pred hHHHHHHHhH--HHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEe---cCccceEEECCC
Confidence 3677888888 9999999999999999865 4679999999999999998753 36666653 223
Q ss_pred CceEEEEeeccCCCCcCcCCCc---ccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc
Q 013076 110 PPFVALRADMDSLPLQEMVEWE---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG 181 (450)
Q Consensus 110 ~~~ill~~H~DvVp~~~~~~w~---~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~ 181 (450)
+|+|+|+||+||||+++ .|. |.. ++||+|||||+ ||+++++++|++.|++.+.+++++|.|+|++||| |+
T Consensus 79 ~~~l~l~gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~ 156 (466)
T PRK07318 79 EEVLGILGHLDVVPAGD--GWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGW 156 (466)
T ss_pred CCEEEEEEecCCCCCCC--CCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCc
Confidence 48999999999999874 584 442 46899999998 9999999999999999888888999999999999 77
Q ss_pred cchHHHHHcccccc----cc----eEEEec----------------------cCCCCCCceE------Eee---------
Q 013076 182 GGAHKVLEAGVLEK----VN----AIFGLH----------------------VDPNLPIGEV------ASR--------- 216 (450)
Q Consensus 182 ~Ga~~l~~~~~~~~----~d----~~i~~~----------------------~~~~~~~g~~------~~~--------- 216 (450)
.|+++++++..... .| ++++.. .+++.+++.+ ...
T Consensus 157 ~G~~~l~~~~~~~~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~ 236 (466)
T PRK07318 157 KCMDYYFEHEEAPDFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIA 236 (466)
T ss_pred hhHHHHHHhCCCCCEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHH
Confidence 89999998642110 11 111110 0011111110 000
Q ss_pred ------cCcccccc-----eEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhh----------hc------------
Q 013076 217 ------PGPLLAGS-----GFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHL----------VS------------ 263 (450)
Q Consensus 217 ------~g~~~~G~-----~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~----------~~------------ 263 (450)
...++||. .|++|+++|+++|+|.|+.|+|||..|++++.+|+.. ..
T Consensus 237 ~~~~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (466)
T PRK07318 237 AFEAFLAENGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLG 316 (466)
T ss_pred HHHHHHhhcCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCC
Confidence 00134554 4799999999999999999999999999999998641 00
Q ss_pred --ccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCC
Q 013076 264 --READPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFP 341 (450)
Q Consensus 264 --~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 341 (450)
......+..|+|++.|+||... +|++.+|+|++|+++.+++.++|++.++. .+ ++++. ...++
T Consensus 317 ~~~~~~~~g~~t~nvg~i~gg~~~-----~~~~~iDiR~~p~~~~~~v~~~i~~~~~~----~~--~~~~~----~~~~~ 381 (466)
T PRK07318 317 IAYEDDVMGDLTMNVGVFSFDEEK-----GGTLGLNFRYPVGTDFEKIKAKLEKLIGV----TG--VELSE----HEHQK 381 (466)
T ss_pred CcccCCCccCeEEEeeEEEEecCc-----EEEEEEEEeCCCCCCHHHHHHHHHHHHHh----cC--eEEEE----ccCCC
Confidence 1111234679999999998532 79999999999999999999999998764 23 44443 22233
Q ss_pred C--ccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHH
Q 013076 342 P--TINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPY 419 (450)
Q Consensus 342 ~--~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~ 419 (450)
+ ...|+++++.+++++++.+|.++ .+..++|++|+++|...+ .+||.. ||+..++|++||+++++++.+
T Consensus 382 p~~~~~d~~lv~~l~~a~~~~~g~~~--~~~~~~ggtDa~~~~~~i-----~~Gp~~--pg~~~~aH~~dE~v~i~~l~~ 452 (466)
T PRK07318 382 PHYVPKDDPLVKTLLKVYEKQTGLKG--EEQVIGGGTYARLLKRGV-----AFGAMF--PGSEDTMHQANEYIEIDDLIK 452 (466)
T ss_pred ceeeCCCCHHHHHHHHHHHHHhCCCC--CeeEEcchHhHhhCCCeE-----EeCCCC--CCCCCCCcCCCcceeHHHHHH
Confidence 3 34578899999999998778765 345678999999986432 466654 556667999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 013076 420 GAALHASLALRYLL 433 (450)
Q Consensus 420 ~~~~~~~~~~~l~~ 433 (450)
++++|..++.++++
T Consensus 453 ~~~v~~~~l~~~~~ 466 (466)
T PRK07318 453 AAAIYAEAIYELAK 466 (466)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998863
No 44
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-46 Score=385.10 Aligned_cols=359 Identities=14% Similarity=0.149 Sum_probs=269.5
Q ss_pred HHhhhhHHHHHHHHHHhHcCCCCCc-----ch----HHHHHHHHHHHHhcCCceecccCCceE-E-EEEcCCCCceEEEE
Q 013076 48 AKRQELVGWMIGIRRKIHQNPELGY-----QE----FETSQLIRSELDKMGIKYKHPVAVTGV-V-GFIGTGEPPFVALR 116 (450)
Q Consensus 48 ~~~~~~~~~~~~~l~~l~~ips~s~-----~e----~~~~~~l~~~l~~~G~~~~~~~~~~nv-v-a~~~~~~~~~ill~ 116 (450)
.+++. +++++++++|++|||++. +| .++++||.++|+++|++++.. .|+ + +.+++...|+|+|+
T Consensus 41 ~~~~~--~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G~~~~~~---~~~v~~~~~~g~~~~~l~l~ 115 (520)
T PRK06156 41 RLKYG--AAAIESLRELVAFPTVRVEGVPQHENPEFIGFKKLLKSLARDFGLDYRNV---DNRVLEIGLGGSGSDKVGIL 115 (520)
T ss_pred hhhhH--HHHHHHHHHhcCcCcccCCCCCccCCccHHHHHHHHHHHHHHCCCeEEec---CCeEEEEEecCCCCCeEEEE
Confidence 33444 889999999999999974 23 356899999999999998642 354 4 66765444899999
Q ss_pred eeccCCCCcCcCCCcc-----cc----CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cccc
Q 013076 117 ADMDSLPLQEMVEWEY-----KS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGG 183 (450)
Q Consensus 117 ~H~DvVp~~~~~~w~~-----~~----~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~G 183 (450)
|||||||++. .+|.+ ++ ++||++||||+ ||+++++++|+++|++.+.+++++|.|+|++||| |+.|
T Consensus 116 gH~DvVp~~~-~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G 194 (520)
T PRK06156 116 THADVVPANP-ELWVLDGTRLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDP 194 (520)
T ss_pred EecCccCCCC-ccCccCCccCCCCceEEECCEEEEcCcccchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchh
Confidence 9999999865 46866 43 35899999998 9999999999999998888888999999999999 7789
Q ss_pred hHHHHHcccccccceEEEec-------cCCCC-------------------------------CCc-eEEeec-------
Q 013076 184 AHKVLEAGVLEKVNAIFGLH-------VDPNL-------------------------------PIG-EVASRP------- 217 (450)
Q Consensus 184 a~~l~~~~~~~~~d~~i~~~-------~~~~~-------------------------------~~g-~~~~~~------- 217 (450)
+++++.++.. .++.+.++ .+++. |.. ...+..
T Consensus 195 ~~~~~~~~~~--~~~~~~~D~~~~~~~~E~~~~~~~i~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~ 272 (520)
T PRK06156 195 LKYYLERYTP--PDYNITLDAEYPVVTAEKGWGTIMATFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALA 272 (520)
T ss_pred HHHHHHhcCC--CCeEEeeCCCCceEEEecceEEEEEEecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHH
Confidence 9999886532 23322211 01110 000 000000
Q ss_pred ----------Ccccccce---------EEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcc--------------
Q 013076 218 ----------GPLLAGSG---------FFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSR-------------- 264 (450)
Q Consensus 218 ----------g~~~~G~~---------~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~-------------- 264 (450)
-..++|.+ |++|+++|+++|+|.|+.|.|||..+++++.+|+++...
T Consensus 273 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~ 352 (520)
T PRK06156 273 AALQAAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHSSTPESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLV 352 (520)
T ss_pred HHHHHHHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCCCCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhh
Confidence 00122444 899999999999999999999999999999999752100
Q ss_pred -------------cCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEE
Q 013076 265 -------------EADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVD 331 (450)
Q Consensus 265 -------------~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~ 331 (450)
.....+..+++++.|.+|. ++|++++|+|++|+++.++++++|++.++.....+++++++.
T Consensus 353 ~~~~~g~~~g~~~~~~~~g~~t~~~~~I~gg~------~~~~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~~gv~ve~~ 426 (520)
T PRK06156 353 GLDYLGEKFGVAYKDDFMGPLTLSPTVVGQDD------KGTEVTVNLRRPVGKTPELLKGEIADALAAWQAKHQVALDID 426 (520)
T ss_pred CCCCccCcCCccccCCCccCcEEeeeEEEEeC------CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHhhcCceEEEe
Confidence 0112345678899998875 689999999999999999999999999987665566666554
Q ss_pred eeccCCCCCC-CccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCc
Q 013076 332 FLSKEKPFFP-PTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYF 410 (450)
Q Consensus 332 ~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E 410 (450)
. ....| ....|+++++.+++++++.+|.++ .+..++|+||++++. + ++.|||.. ||....+|++||
T Consensus 427 ~----~~~~p~~~~~d~~lv~~l~~a~~~~~G~~~--~~~~~~ggTDa~~~~---~--~v~fGP~~--~g~~~~aHt~dE 493 (520)
T PRK06156 427 Y----YWGEPMVRDPKGPWLKTLLDVFGHFTGLDA--KPVAIAGSTNAKLFP---N--AVSFGPAM--PGVKYTGHTENE 493 (520)
T ss_pred e----cCCCceeeCCCCHHHHHHHHHHHHHhCCCC--ceeeecChhhhhhCC---c--cEEEcCCC--CCCCCCCcCccc
Confidence 3 11112 223467899999999999888866 345688999998874 3 34577654 344457999999
Q ss_pred ccCCCccHHHHHHHHHHHHHHHh
Q 013076 411 TLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 411 ~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
+++++++.+++++|..++.++++
T Consensus 494 ~V~ie~l~~~~~i~~~~l~~l~~ 516 (520)
T PRK06156 494 FKTVEQFMLDLQMYTEMLIRIGN 516 (520)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999985
No 45
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=1.8e-46 Score=376.85 Aligned_cols=352 Identities=15% Similarity=0.171 Sum_probs=274.1
Q ss_pred HHHHHHHHHhHcCCCCCcc----------hHHHHHHHHHHHHhcCCc-eecccCCceEEEEEcCC---CCceEEEEeecc
Q 013076 55 GWMIGIRRKIHQNPELGYQ----------EFETSQLIRSELDKMGIK-YKHPVAVTGVVGFIGTG---EPPFVALRADMD 120 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~----------e~~~~~~l~~~l~~~G~~-~~~~~~~~nvva~~~~~---~~~~ill~~H~D 120 (450)
+.+++.|++|++|||+|.+ |.++++||+++|+++|++ ++.+ ..+||++.++++ ++|+|+|+||||
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~-~~~~v~~~~~g~~~~~~~~i~l~~H~D 80 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQDVTLD-ENGYVMATLPANVDKDVPTIGFIAHMD 80 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEEC-CCeEEEEEecCCCCCCCCeEEEEEecc
Confidence 5689999999999999976 788999999999999997 5543 467899999664 249999999999
Q ss_pred CCCCcCc---------------------CCCcccc--------CCCCceeccc-----c--hHHHHHHHHHHHHHHhccc
Q 013076 121 SLPLQEM---------------------VEWEYKS--------KIPGKMHACG-----H--DGHVTMLLGAAKILQEHRE 164 (450)
Q Consensus 121 vVp~~~~---------------------~~w~~~~--------~~~g~l~GrG-----~--kg~~a~~l~a~~~l~~~~~ 164 (450)
|||+.+. ..|++.+ ..++.+|||| + ||++|++|+|+++|++.+.
T Consensus 81 ~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~ 160 (408)
T PRK05469 81 TAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPE 160 (408)
T ss_pred CCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCC
Confidence 9987541 2344332 1235688877 3 9999999999999988766
Q ss_pred cCCceEEEEEecCCCCccchHHHHHcccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCC
Q 013076 165 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQH 243 (450)
Q Consensus 165 ~~~~~i~~~~~~dEEg~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~~ 243 (450)
.++++|.|+|++|||.+.|++.++.++. ..++.+..+ + .+.|.+... ++|..+++|+++|+++|++ .|+.
T Consensus 161 ~~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~~~~~~~~--~-~~~g~~~~~----~~g~~~~~i~v~Gk~~Ha~~~p~~ 231 (408)
T PRK05469 161 IKHGDIRVAFTPDEEIGRGADKFDVEKF--GADFAYTVD--G-GPLGELEYE----NFNAASAKITIHGVNVHPGTAKGK 231 (408)
T ss_pred CCCCCEEEEEecccccCCCHHHhhhhhc--CCcEEEEec--C-CCcceEEec----cCceeEEEEEEeeecCCCCCCccc
Confidence 6789999999999994489988865432 245555443 2 345554332 4688999999999999987 5899
Q ss_pred CCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHh
Q 013076 244 SIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAV 323 (450)
Q Consensus 244 g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~ 323 (450)
|.|||..+++++..|+++..+........+++++.|+|| |++|++.+|+|+.+.++.+.+.++|++++++.+..
T Consensus 232 g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~gg------p~~~~i~~diR~~~~e~~e~i~~~i~~~~~~~~~~ 305 (408)
T PRK05469 232 MVNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKGT------VEEAELSYIIRDFDREGFEARKALMQEIAKKVNAK 305 (408)
T ss_pred ccCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEEc------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998876432222222345788888876 79999999999999999999999999999998776
Q ss_pred h-CCeEEEEeeccCCCC-CCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCC
Q 013076 324 Q-RCSATVDFLSKEKPF-FPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLG 400 (450)
Q Consensus 324 ~-~~~~~i~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg 400 (450)
+ ++++++++... .+. .+...+|+++++.+++++++. |.++. ...++|++|+++|... +|++++++| .
T Consensus 306 ~~~~~~~~~~~~~-~~~~~~~~~~~~~lv~~~~~a~~~~-g~~~~--~~~~~ggtD~~~~~~~giP~v~~gpG--~---- 375 (408)
T PRK05469 306 YGEGRVELEIKDQ-YYNMREKIEPHPHIVDLAKQAMEDL-GIEPI--IKPIRGGTDGSQLSFMGLPCPNIFTG--G---- 375 (408)
T ss_pred cCCCeEEEEEeeh-hhhhhhhhcCCHHHHHHHHHHHHHc-CCCcE--EecCCCcccHHHHhhCCCceEEECcC--c----
Confidence 6 56777765211 111 124567889999999999986 87653 3467899999999866 998775433 2
Q ss_pred CCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhh
Q 013076 401 KVESIHSPYFTLNEDALPYGAALHASLALRYLLE 434 (450)
Q Consensus 401 ~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 434 (450)
..+|++||++++++|..++++|.+++..++++
T Consensus 376 --~~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~~ 407 (408)
T PRK05469 376 --HNFHGKFEFVSLESMEKAVEVIVEIAELTAER 407 (408)
T ss_pred --ccCcCcceeeEHHHHHHHHHHHHHHHHHHhcC
Confidence 24999999999999999999999999988764
No 46
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=3.8e-46 Score=375.42 Aligned_cols=346 Identities=19% Similarity=0.172 Sum_probs=273.2
Q ss_pred HHHHHHHHHhHcCCC---------CCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC-CCceEEEEeeccCCCC
Q 013076 55 GWMIGIRRKIHQNPE---------LGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG-EPPFVALRADMDSLPL 124 (450)
Q Consensus 55 ~~~~~~l~~l~~ips---------~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~-~~~~ill~~H~DvVp~ 124 (450)
+++++++.+|++|+| .+++|.++++||.++|+++||++++. ..+|+++++++. ++|+|+|+||+||||+
T Consensus 10 ~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nl~a~~~g~~~~~~l~l~gH~DtVp~ 88 (412)
T PRK12892 10 QRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAGLAVRID-GIGNVFGRLPGPGPGPALLVGSHLDSQNL 88 (412)
T ss_pred HHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCeEEEEccccCCCC
Confidence 568899999999876 56678899999999999999999864 467999999753 4588999999999997
Q ss_pred cCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-----c-cchHHHHHcccc-----
Q 013076 125 QEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG-----G-GGAHKVLEAGVL----- 193 (450)
Q Consensus 125 ~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg-----~-~Ga~~l~~~~~~----- 193 (450)
+ |++||+ ++++++|.|+++|++.+..++++|.|++++|||+ + .|++.++.+...
T Consensus 89 ~------------g~~dg~---~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~ 153 (412)
T PRK12892 89 G------------GRYDGA---LGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADALA 153 (412)
T ss_pred C------------Ccccch---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHHh
Confidence 4 345665 6899999999999999888999999999999995 3 589888742100
Q ss_pred ------------------cccceEEE-----------eccCCC---CCCceEEeecCcccccceEEEEEEEecCCCCCC-
Q 013076 194 ------------------EKVNAIFG-----------LHVDPN---LPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAI- 240 (450)
Q Consensus 194 ------------------~~~d~~i~-----------~~~~~~---~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~- 240 (450)
...|+++. +|.+.+ ++.+. ......+++|..|++|+++|+++|++.
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~-~~~i~~~~kG~~~~~i~v~G~~aHa~~~ 232 (412)
T PRK12892 154 ARCRSDGVPLRDALAAAGLAGRPRPAADRARPKGYLEAHIEQGPVLEQAGL-PVGVVTGIVGIWQYRITVTGEAGHAGTT 232 (412)
T ss_pred CccCCCCcCHHHHHHHcCCChhhcccccccCccEEEEEEeccCHhHhhCCC-cEEEEEEeccceEEEEEEEEECCCCCCC
Confidence 00111111 121110 11121 011224578999999999999999874
Q ss_pred CC-CCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecC-CCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHH
Q 013076 241 PQ-HSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVII 318 (450)
Q Consensus 241 p~-~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~ 318 (450)
|+ .|.|||..+++++.+|+++..+.. .+.+++++.|+|| .+.|+||++|++++|+|+.|+++.+++.++|+++++
T Consensus 233 p~~~g~nAi~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~ 309 (412)
T PRK12892 233 PMALRRDAGLAAAEMIAAIDEHFPRVC---GPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEALCR 309 (412)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 65 688999999999999998653321 2379999999987 799999999999999999999999999999999999
Q ss_pred HHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCC
Q 013076 319 GQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNET 398 (450)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~ 398 (450)
..+..+++++++.. ...++++..|+++++.+++++++ +|.++. ....+|++|+++|.+.+|++++ +||.
T Consensus 310 ~~~~~~~~~~e~~~----~~~~~~~~~d~~lv~~~~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~ip~~~~-~gp~--- 378 (412)
T PRK12892 310 EIARRRGCRVSVDR----IAEYAPAPCDAALVDALRAAAEA-AGGPYL--EMPSGAGHDAQNMARIAPSAML-FVPS--- 378 (412)
T ss_pred HHHHHhCCeEEEEE----EecCCCcCCCHHHHHHHHHHHHH-cCCCcc--ccCcchHHHHHHHHhHCCEEEE-Eecc---
Confidence 88777788877765 33466667788999999999998 587653 3567899999999887886543 5543
Q ss_pred CCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 399 LGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 399 pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
....+|++||+++++++.+++++|+.++.++++
T Consensus 379 --~~~~~H~~~E~v~i~~l~~~~~il~~~l~~~~~ 411 (412)
T PRK12892 379 --KGGISHNPAEDTSPADLAQGARVLADTLRRLAR 411 (412)
T ss_pred --CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 234699999999999999999999999988864
No 47
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=2e-46 Score=380.28 Aligned_cols=352 Identities=13% Similarity=0.110 Sum_probs=258.8
Q ss_pred HHHHHHHHHhHcCCCCCcch----------HHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCCCC
Q 013076 55 GWMIGIRRKIHQNPELGYQE----------FETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPL 124 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e----------~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~ 124 (450)
++++++|++|++|||+++++ .++++|+.++|+++||++++.....+++++++.+ +|+|+|+||+||||+
T Consensus 11 ~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~g~~-~~~lll~gH~DvVp~ 89 (444)
T PRK07205 11 DACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDPKGYYGYAEIGQG-EELLAILCHLDVVPE 89 (444)
T ss_pred HHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcCCCeEEEEEecCC-CcEEEEEEeeccCCC
Confidence 78999999999999999764 5688999999999999987654345677777543 489999999999999
Q ss_pred cCcCCCc---ccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHccccc--
Q 013076 125 QEMVEWE---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLE-- 194 (450)
Q Consensus 125 ~~~~~w~---~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~-- 194 (450)
++.+.|. |.. ++||+|||||+ ||+++++|.|+++|++.+.+++++|.|+|++||| ++.|++.+++.....
T Consensus 90 ~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~~~~~ 169 (444)
T PRK07205 90 GDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVEEQATM 169 (444)
T ss_pred CCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCCCCCCe
Confidence 8777895 543 56899999998 9999999999999999888889999999999999 678888887742110
Q ss_pred --ccc----eEEEec------cCCCCCCceEEeecC-----------------------cccccc----eEEEEEEEecC
Q 013076 195 --KVN----AIFGLH------VDPNLPIGEVASRPG-----------------------PLLAGS----GFFEAVIGGKG 235 (450)
Q Consensus 195 --~~d----~~i~~~------~~~~~~~g~~~~~~g-----------------------~~~~G~----~~~~i~v~G~~ 235 (450)
..| ++++.- .. ++|+.......| ..++|. .+.+|+++|++
T Consensus 170 ~~~~~~~~~v~~~ekG~~~~~i~-~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~G~~ 248 (444)
T PRK07205 170 GFAPDSSFPLTYAEKGLLQAKLV-GPGSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTVLGKS 248 (444)
T ss_pred eECCCCCCceEEEEeceEEEEEE-eCCccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEEEeEE
Confidence 011 111100 00 111111100000 011231 23499999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhhhhc-----c--------------c-CCCCCCceEEEEEEecCCCCCCCCCeEEEE
Q 013076 236 GHAAIPQHSIDPILAASNVIVSLQHLVS-----R--------------E-ADPLDSQVVTVAKFQGGGAFNVIPDSVLIG 295 (450)
Q Consensus 236 ~Hss~p~~g~nAi~~~~~~l~~l~~~~~-----~--------------~-~~~~~~~t~~i~~i~gG~~~nviP~~a~~~ 295 (450)
+|+|.|+.|.|||..+++++.++++... + . ....+.+++|++.+ |+||++|++.
T Consensus 249 ~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~~------nvvP~~a~~~ 322 (444)
T PRK07205 249 VHAKDAPQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAGL------TITKEKSEIR 322 (444)
T ss_pred cccCCCccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEEE------EEECCEEEEE
Confidence 9999999999999999999988865310 0 0 01134578888764 8999999999
Q ss_pred EEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCC--ccCChHHHHHHHHHHHhhcCCccccccCCCc
Q 013076 296 GTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPP--TINNNDLHKYFQTVAGDMLDTQKVKVMAPVM 373 (450)
Q Consensus 296 idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~ 373 (450)
+|+|++|+++.+++.++|+++++. .+..+ .. ...+++ .+.|+++++.+.+++++.+|.+. ....++
T Consensus 323 ld~R~~p~~~~e~v~~~i~~~~~~----~~v~~--~~----~~~~~p~~~~~~~~lv~~l~~~~~~~~g~~~--~~~~~g 390 (444)
T PRK07205 323 IDIRIPVLADKEKLVQQLSQKAQE----YGLTY--EE----FDYLAPLYVPLDSELVSTLMSVYQEKTGDDS--PAQSSG 390 (444)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHH----cCcEE--EE----ecCCCceeeCCCcHHHHHHHHHHHHHhCCCC--ceEEec
Confidence 999999999999999999998764 23333 22 112233 34578899999999999878754 234456
Q ss_pred ccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 374 GSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 374 g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
|++|+..+ .|+ +.+|+.. ||+...+|++||+++++++.+++++|..++.++++
T Consensus 391 g~~~~~~~---~~~--i~~G~~~--Pg~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~l~~ 443 (444)
T PRK07205 391 GATFARTM---PNC--VAFGALF--PGAPQTEHQANEHIVLEDLYRAMDIYAEAIYRLTT 443 (444)
T ss_pred cHHHHHhC---CCc--EEECCcc--CCCCCCCcCcccCccHHHHHHHHHHHHHHHHHHhc
Confidence 66665432 343 3578655 56667899999999999999999999999999875
No 48
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1e-45 Score=372.11 Aligned_cols=346 Identities=18% Similarity=0.203 Sum_probs=272.7
Q ss_pred HHHHHHHHHhHcCCCC----------CcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC-C-CceEEEEeeccCC
Q 013076 55 GWMIGIRRKIHQNPEL----------GYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG-E-PPFVALRADMDSL 122 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~-~-~~~ill~~H~DvV 122 (450)
+++++++++|++|||. |++|.++++||.++|+++||++++. ...|++++++++ + +|+|+|.||+|||
T Consensus 10 ~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~a~~~g~~~~~~~l~l~~H~DtV 88 (412)
T PRK12893 10 ERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVD-AIGNLFGRRAGTDPDAPPVLIGSHLDTQ 88 (412)
T ss_pred HHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCEEEEEecccCC
Confidence 6789999999999964 4558999999999999999999864 356999999553 2 5899999999999
Q ss_pred CCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC------ccchHHHHHcccc---
Q 013076 123 PLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG------GGGAHKVLEAGVL--- 193 (450)
Q Consensus 123 p~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg------~~Ga~~l~~~~~~--- 193 (450)
|.+ |.+|| |++++++|.|+++|++.+..++++|.|+|++|||+ +.|+.++.+....
T Consensus 89 p~~------------g~~dg---k~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~~ 153 (412)
T PRK12893 89 PTG------------GRFDG---ALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDDA 153 (412)
T ss_pred CCC------------Ccccc---hhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCChHHH
Confidence 974 33455 58999999999999998878899999999999994 3588777643210
Q ss_pred ----------------------------cccceEEEeccCCCC---CCceEEeecCcccccceEEEEEEEecCCCCCC-C
Q 013076 194 ----------------------------EKVNAIFGLHVDPNL---PIGEVASRPGPLLAGSGFFEAVIGGKGGHAAI-P 241 (450)
Q Consensus 194 ----------------------------~~~d~~i~~~~~~~~---~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~-p 241 (450)
.+.+..+.+|.+++. +.+. ......+++|..|++|+++|+++|+|. |
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~G~~aHas~~p 232 (412)
T PRK12893 154 LARRDADGITLGEALARIGYRGTARVGRRAVDAYLELHIEQGPVLEAEGL-PIGVVTGIQGIRWLEVTVEGQAAHAGTTP 232 (412)
T ss_pred HhccCCCCCCHHHHHHHcCCCcccccccCCccEEEEEEeccCHHHHHCCC-cEEEEeeecccEEEEEEEEEECCCcCCCc
Confidence 011223333332210 0010 011224578999999999999999985 8
Q ss_pred C-CCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecC-CCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 013076 242 Q-HSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIG 319 (450)
Q Consensus 242 ~-~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~ 319 (450)
+ .|+|||..+++++.+|+++..+.. ..++++++.|+|| ...|+||++|++.+|+|++|+++.+++.++|+++++.
T Consensus 233 ~~~G~NAI~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~ 309 (412)
T PRK12893 233 MAMRRDALVAAARIILAVERIAAALA---PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRAACAK 309 (412)
T ss_pred chhccCHHHHHHHHHHHHHHHHHhcC---CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 5 799999999999999998753321 2468999999985 7999999999999999999999999999999999998
Q ss_pred HHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCCC
Q 013076 320 QAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETL 399 (450)
Q Consensus 320 ~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~p 399 (450)
.+..++++++++. ...++++..|+++++.+++++++. |.++. ....+|+||+++|.+.+|++++ +||..
T Consensus 310 ~~~~~~~~v~~~~----~~~~~~~~~d~~l~~~l~~~~~~~-g~~~~--~~~~~g~tD~~~~~~~~p~~v~-~gp~~--- 378 (412)
T PRK12893 310 IAAARGVQVTVET----VWDFPPVPFDPALVALVEAAAEAL-GLSHM--RMVSGAGHDAMFLARVAPAAMI-FVPCR--- 378 (412)
T ss_pred HHHHcCCeEEEEE----EecCCCcCCCHHHHHHHHHHHHHc-CCCcc--ccCCccHHHHHHHHhhCCEEEE-EeecC---
Confidence 8766777777654 234666777889999999999875 76653 4567899999999888886443 55432
Q ss_pred CCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 400 GKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 400 g~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
...+|++||++++++|.+++++|..++.+++.
T Consensus 379 --~~~~Hs~dE~v~i~~l~~~~~i~~~ll~~~~~ 410 (412)
T PRK12893 379 --GGISHNEAEDTEPADLAAGANVLLHAVLELAG 410 (412)
T ss_pred --CCCCCCccccCCHHHHHHHHHHHHHHHHHhhc
Confidence 34689999999999999999999999999865
No 49
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=3.6e-46 Score=365.38 Aligned_cols=327 Identities=14% Similarity=0.112 Sum_probs=254.9
Q ss_pred HHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCCCCcCcCCCccccCCCC
Q 013076 59 GIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 138 (450)
Q Consensus 59 ~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~~~~~~~g 138 (450)
+++++|++|||++++|.++++||+++|+++|+++..+ ...|+++..+++ +|+|+|+|||||||. .|+.. .+||
T Consensus 1 ~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~-~~~~~~~~~~~~-~~~i~~~~H~D~vp~----~~~~~-~~~g 73 (336)
T TIGR01902 1 ELLKDLLEIYSPSGKEANAAKFLEEISKDLGLKLIID-DAGNFILGKGDG-HKKILLAGHVDTVPG----YIPVK-IEGG 73 (336)
T ss_pred ChHHHHhcCCCCCcchHHHHHHHHHHHHHcCCEEEEC-CCCcEEEEeCCC-CceEEEEccccccCC----CcccE-EeCC
Confidence 3689999999999999999999999999999998543 356888876433 599999999999994 35443 4689
Q ss_pred ceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEeccCCCCCCceEE
Q 013076 139 KMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVA 214 (450)
Q Consensus 139 ~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~ 214 (450)
++||||+ ||+++++|.|++.|++. ..+|.|++++||| ++.|+++++++.. .+++++. + |++.-
T Consensus 74 ~i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~ii~--e---pt~~~- 140 (336)
T TIGR01902 74 LLYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKGAREVIDKNY---PFYVIVG--E---PSGAE- 140 (336)
T ss_pred EEEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCccHHHHHhhcC---CCEEEEe--c---CCCCc-
Confidence 9999998 99999999999999764 3689999999999 6789999998743 2455543 2 23210
Q ss_pred eecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEE
Q 013076 215 SRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLI 294 (450)
Q Consensus 215 ~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~ 294 (450)
....+++|..+++++++|+++|+|.|. ||+..+.+++..|.+..... .....++++++.++||...|+||++|++
T Consensus 141 -~i~~~~kG~~~~~v~~~G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~i~gg~~~nvIP~~a~~ 215 (336)
T TIGR01902 141 -GITLGYKGSLQLKIMCEGTPFHSSSAG---NAAELLIDYSKKIIEVYKQP-ENYDKPSIVPTIIRFGESYNDTPAKLEL 215 (336)
T ss_pred -ceeeeeeeEEEEEEEEEecCcccCCCh---hHHHHHHHHHHHHHHHhccc-cCCCCCcceeEEEEccCCCcCCCceEEE
Confidence 112346899999999999999999875 59999999999987322111 1122457899999999999999999999
Q ss_pred EEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCc--cCChHHHHHHHHHHHhhcCCccccccCCC
Q 013076 295 GGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPT--INNNDLHKYFQTVAGDMLDTQKVKVMAPV 372 (450)
Q Consensus 295 ~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~ 372 (450)
.+|+|+.|+++.+++.++|++. ...++++.. ..+++ +.|+++++.++++++++ +.++ .....
T Consensus 216 ~idiR~~p~~~~~~~~~~i~~~-------~~~~~~~~~------~~~p~~~~~~~~lv~~~~~a~~~~-~~~~--~~~~~ 279 (336)
T TIGR01902 216 HFDLRYPPNNKPEEAIKEITDK-------FPICLEIVD------ETPPYKVSRNNPLVRAFVRAIRKQ-GMKP--RLKKK 279 (336)
T ss_pred EEEEeeCCCCCHHHHHHHHHhc-------cCceEEEEe------ccCceecCCCCHHHHHHHHHHHHc-CCCe--EEeec
Confidence 9999999999999988887761 223333221 22333 45778999999999987 5554 23456
Q ss_pred cccchHHHHhhh--cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 373 MGSEDFSFYQEV--MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 373 ~g~tD~~~~~~~--~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
+|++|+++|.+. +|++. |||+ ....+|++||+++++++.+++++|..++..+++
T Consensus 280 ~g~tD~~~~~~~~g~p~v~--~Gpg-----~~~~aH~~nE~v~i~~l~~~~~~~~~~l~~l~~ 335 (336)
T TIGR01902 280 TGTSDMNILAPIWTVPMVA--YGPG-----DSTLDHTPQEKISLAEYLIGIKTLMLAIEELWQ 335 (336)
T ss_pred cccCccceeccccCCCeEE--ECCC-----CcccCCCCcceeEHHHHHHHHHHHHHHHHHHhc
Confidence 788999999875 67654 6643 345689999999999999999999999998865
No 50
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.8e-45 Score=368.66 Aligned_cols=347 Identities=17% Similarity=0.181 Sum_probs=271.8
Q ss_pred HHHHHHHHHhHcC-C---------CCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC--CCceEEEEeeccCC
Q 013076 55 GWMIGIRRKIHQN-P---------ELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG--EPPFVALRADMDSL 122 (450)
Q Consensus 55 ~~~~~~l~~l~~i-p---------s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~--~~~~ill~~H~DvV 122 (450)
+.+++++++|++| + |.|++|.++++||+++|+++||++++. ...||+++++++ ++|+|+|+||+|||
T Consensus 7 ~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~~~~~~-~~~nl~a~~~g~~~~~~~l~l~gH~DtV 85 (413)
T PRK09290 7 ERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGLTVRVD-AVGNLFGRLEGRDPDAPAVLTGSHLDTV 85 (413)
T ss_pred HHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCEEEEecCccCC
Confidence 6678888888888 3 778899999999999999999999864 467999999753 25899999999999
Q ss_pred CCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCc------cchHHHHHccc----
Q 013076 123 PLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGG------GGAHKVLEAGV---- 192 (450)
Q Consensus 123 p~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~------~Ga~~l~~~~~---- 192 (450)
|++. .++| |+++|+++.|+++|++.+..++++|.|++++|||++ .|++.+++...
T Consensus 86 p~~g------------~~d~---k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~~ 150 (413)
T PRK09290 86 PNGG------------RFDG---PLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPEDA 150 (413)
T ss_pred CCCC------------CcCC---HHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcccCHHHH
Confidence 9742 2222 689999999999999988788999999999999942 57877653210
Q ss_pred ------------------ccccceEEEeccCCC----------------CCCceEEeecCcccccceEEEEEEEecCCCC
Q 013076 193 ------------------LEKVNAIFGLHVDPN----------------LPIGEVASRPGPLLAGSGFFEAVIGGKGGHA 238 (450)
Q Consensus 193 ------------------~~~~d~~i~~~~~~~----------------~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hs 238 (450)
-.+.|++++...+|. +|++.. .....+++|..|++|+++|+++|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~~-~~i~~~~kG~~~~~i~v~Gk~aHa 229 (413)
T PRK09290 151 LALRDADGVSFAEALAAIGYDGDEAVGAARARRDIKAFVELHIEQGPVLEAEGLP-IGVVTGIVGQRRYRVTFTGEANHA 229 (413)
T ss_pred HhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeccCHHHHHCCCc-EEEEeeeeccEEEEEEEEEECCCC
Confidence 012344442100111 112110 112245789999999999999998
Q ss_pred C-CC-CCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecC-CCCCCCCCeEEEEEEEecCChhhHHHHHHHHHH
Q 013076 239 A-IP-QHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (450)
Q Consensus 239 s-~p-~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~ 315 (450)
+ .| +.|.|||..+++++.+|+++..+.. ...+++++.|++| ...|+||++|++.+|+|+.|+++.+++.++|++
T Consensus 230 s~~P~~~g~NAI~~~~~~i~~l~~l~~~~~---~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i~~ 306 (413)
T PRK09290 230 GTTPMALRRDALLAAAEIILAVERIAAAHG---PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAELRA 306 (413)
T ss_pred CCCCchhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHHHH
Confidence 8 68 5899999999999999988753221 2468999999975 799999999999999999999999999999999
Q ss_pred HHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEeccc
Q 013076 316 VIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMK 395 (450)
Q Consensus 316 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~ 395 (450)
+++..+..+++++++.. ...+|++..|+++++.+++++++. |.++. ....+|++|+++|...+|++++ +||.
T Consensus 307 ~~~~~~~~~~~~~e~~~----~~~~~~~~~d~~lv~~l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~iP~~~~-~gp~ 378 (413)
T PRK09290 307 AAEAIAARRGVEVEIEL----ISRRPPVPFDPGLVAALEEAAERL-GLSYR--RLPSGAGHDAQILAAVVPTAMI-FVPS 378 (413)
T ss_pred HHHHHHHHcCCeEEEEE----EecCCCccCCHHHHHHHHHHHHHc-CCCcc--ccCCccchHHHHHhccCCEEEE-Eecc
Confidence 99987766777777765 334566677889999999999876 76542 3567899999999777997553 4433
Q ss_pred CCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhh
Q 013076 396 NETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLE 434 (450)
Q Consensus 396 ~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 434 (450)
. ...+|++||++++++|.+++++|+.++.++++.
T Consensus 379 ~-----~~~~H~~dE~v~i~~l~~~~~v~~~~l~~l~~~ 412 (413)
T PRK09290 379 V-----GGISHNPAEFTSPEDCAAGANVLLHALLELAEE 412 (413)
T ss_pred C-----CCCCCCccccCCHHHHHHHHHHHHHHHHHHhcc
Confidence 2 345899999999999999999999999998753
No 51
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=1.7e-45 Score=369.18 Aligned_cols=351 Identities=15% Similarity=0.156 Sum_probs=267.7
Q ss_pred HHHHHHHHHhHcCCCCCc----------chHHHHHHHHHHHHhcCCc-eecccCCceEEEEEcCCCC---ceEEEEeecc
Q 013076 55 GWMIGIRRKIHQNPELGY----------QEFETSQLIRSELDKMGIK-YKHPVAVTGVVGFIGTGEP---PFVALRADMD 120 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvva~~~~~~~---~~ill~~H~D 120 (450)
+.+++.+.++++|+|.|+ .|.++++||+++|+++|++ ++.+.+.+||+|++++..+ |+|+|.+|||
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmD 82 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVD 82 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecc
Confidence 568899999999999998 5668999999999999997 7766447899999976543 9999999999
Q ss_pred CCCCcCcC-------------------------CCcc---c-------c-CCCCceecccchHHHHHHHHHHHHHHhccc
Q 013076 121 SLPLQEMV-------------------------EWEY---K-------S-KIPGKMHACGHDGHVTMLLGAAKILQEHRE 164 (450)
Q Consensus 121 vVp~~~~~-------------------------~w~~---~-------~-~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~ 164 (450)
|||..... .|.| . . ..++.+||+++||++|++|.|+++|++.+.
T Consensus 83 Tv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~ 162 (410)
T TIGR01882 83 TADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPE 162 (410)
T ss_pred cCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCC
Confidence 99842211 3422 2 1 346699999999999999999999988643
Q ss_pred cCCceEEEEEecCCCCccchHHHHHcccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCC-CC
Q 013076 165 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIP-QH 243 (450)
Q Consensus 165 ~~~~~i~~~~~~dEEg~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p-~~ 243 (450)
.++++|.|+|++|||.+.|++.+..++. +.++.+.+ + ++|+|.+..+ ..|..+++|+++|+++|++.+ +.
T Consensus 163 ~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~~~~~i--~-gep~g~i~~~----~~g~~~~~I~v~Gk~aHa~~~~~~ 233 (410)
T TIGR01882 163 IKHGTIRVAFTPDEEIGRGAHKFDVKDF--NADFAYTV--D-GGPLGELEYE----TFSAAAAKITIQGNNVHPGTAKGK 233 (410)
T ss_pred CCCCCEEEEEECcccCCcCcchhhhhhc--CccEEEEe--C-CCCCCeEEEc----cccceEEEEEEEEEecCcccChHH
Confidence 4689999999999995568888765433 34544443 3 3577765443 247899999999999999965 68
Q ss_pred CCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHh
Q 013076 244 SIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAV 323 (450)
Q Consensus 244 g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~ 323 (450)
+.||+..+.+++..+...... ..++-+.+.+++|. .|.||++|++.+|+|+.+.++.+++.++|++++++.+..
T Consensus 234 g~nAi~~a~~~~~~l~~~~~~-----~~t~~~~g~i~~g~-i~giPd~a~l~~diR~~~~e~~e~i~~~i~~i~~~~~~~ 307 (410)
T TIGR01882 234 MINAAQIAIDLHNLLPEDDRP-----EYTEGREGFFHLLS-IDGTVEEAKLHYIIRDFEKENFQERKELMKRIVEKMNNE 307 (410)
T ss_pred HHHHHHHHHHHHHhcCCcCCC-----ccccceeEEEEEEe-EEEecCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988776543211 11111223455553 566999999999999999999999999999999998776
Q ss_pred hCC-eEEEEeeccCCCC-CCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCC
Q 013076 324 QRC-SATVDFLSKEKPF-FPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLG 400 (450)
Q Consensus 324 ~~~-~~~i~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg 400 (450)
+++ .+++++... .+. .+...+|+++++.+++++++. |.++. ....+|+||+++|... +|++.+++|
T Consensus 308 ~g~~~v~~~~~~~-~~~~~~~~~~~~~lv~~~~~a~~~~-G~~~~--~~~~~ggtDa~~~~~~Gip~~~~G~G------- 376 (410)
T TIGR01882 308 YGQDRIKLDMNDQ-YYNMAEKIEKVMEIVDIAKQAMENL-GIEPK--ISPIRGGTDGSQLSYMGLPTPNIFAG------- 376 (410)
T ss_pred cCCceEEEEEEee-ecChhhccCCCHHHHHHHHHHHHHh-CCCCc--ccccceechHHHHHhCCCCCCeEcCC-------
Confidence 663 445554211 111 123456889999999999986 76653 3567899999999877 898764433
Q ss_pred CCCCCCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 401 KVESIHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 401 ~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
. ..+|++||||++++|.+++++|.+++..+.
T Consensus 377 ~-~~aHt~dE~v~i~~l~~~~~~~~~li~~~~ 407 (410)
T TIGR01882 377 G-ENMHGRFEYISVDNMVKAVDVIVEIAKLNE 407 (410)
T ss_pred c-ccCcCCceEEEHHHHHHHHHHHHHHHHHHh
Confidence 2 459999999999999999999999998775
No 52
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.3e-44 Score=361.70 Aligned_cols=333 Identities=17% Similarity=0.139 Sum_probs=262.9
Q ss_pred CCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC-C-CceEEEEeeccCCCCcCcCCCccccCCCCceecccchH
Q 013076 70 LGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG-E-PPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDG 147 (450)
Q Consensus 70 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~-~-~~~ill~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~kg 147 (450)
.+++|.++++||.++|+++|++++++ ...|+++++++. + +|+|+|+|||||||.+. . .++|+
T Consensus 35 ~~~~e~~~~~~l~~~l~~~G~~v~~~-~~gNl~a~~~g~~~~~~~l~~~~H~DtVp~gg------------~---~D~k~ 98 (414)
T PRK12891 35 LTDGDREARDLFVAWARDAGCTVRVD-AMGNLFARRAGRDPDAAPVMTGSHADSQPTGG------------R---YDGIY 98 (414)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEC-CCCCEEEEecCCCCCCCeEEEEecccCCCCCc------------c---ccchh
Confidence 45678999999999999999999865 467999999664 2 48999999999999752 1 24689
Q ss_pred HHHHHHHHHHHHHhccccCCceEEEEEecCCCCc------cchHHH------------------------HHccccc---
Q 013076 148 HVTMLLGAAKILQEHREELKGTVVLVFQPAEEGG------GGAHKV------------------------LEAGVLE--- 194 (450)
Q Consensus 148 ~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~------~Ga~~l------------------------~~~~~~~--- 194 (450)
+++++|.|+++|++.+.+++++|.|++++|||++ .|++.+ .+.|+..
T Consensus 99 Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 178 (414)
T PRK12891 99 GVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLLSRRDDTGRTLGEHLARIGYAGAEP 178 (414)
T ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHHhccCCCCCCHHHHHHHCCCCcccc
Confidence 9999999999999999999999999999999953 366533 3333311
Q ss_pred ----ccceEEEeccCCC---CCCceEEeecCcccccceEEEEEEEecCCCCC-CCC-CCCcHHHHHHHHHHHHhhhhccc
Q 013076 195 ----KVNAIFGLHVDPN---LPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQ-HSIDPILAASNVIVSLQHLVSRE 265 (450)
Q Consensus 195 ----~~d~~i~~~~~~~---~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~-~g~nAi~~~~~~l~~l~~~~~~~ 265 (450)
+.++.+.+|.+++ ++.+. ......+++|..|++|+++|+++|+| .|+ .|.|||..+++++.+|+++..+.
T Consensus 179 ~~~~~~~~~~e~h~e~g~vle~~~~-~~~iv~~~kG~~~~~v~v~Gk~aHa~~~P~~~g~nAI~~aa~~i~~l~~~~~~~ 257 (414)
T PRK12891 179 VGGYPVHAAYELHIEQGAILERAGK-TIGVVTAGQGQRWYEVTLTGVDAHAGTTPMAFRRDALVGAARMIAFLDALGRRD 257 (414)
T ss_pred cccCCCCEEEEEEeCCCHHHHHCCC-cEEEEeeccCcEEEEEEEEeECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc
Confidence 1234445555443 11221 01112457899999999999999998 686 58999999999999999875421
Q ss_pred CCCCCCceEEEEEEecC-CCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCcc
Q 013076 266 ADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTI 344 (450)
Q Consensus 266 ~~~~~~~t~~i~~i~gG-~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 344 (450)
....++|++.|+|| .+.|+||++|++.+|+|+.|+++.++++++|+++++..+..+++++++.. ...+++..
T Consensus 258 ---~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 330 (414)
T PRK12891 258 ---APDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAELARIADETGLRADIEQ----IFGYAPAP 330 (414)
T ss_pred ---CCCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEE----EecCCCcC
Confidence 13469999999997 69999999999999999999999999999999999988777788777765 34556667
Q ss_pred CChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHH
Q 013076 345 NNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALH 424 (450)
Q Consensus 345 ~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~ 424 (450)
+|+++++.+++++++. |.++. ...++|++|++++...+|++++ +||. ....+|++||++++++|..++++|
T Consensus 331 ~d~~lv~~l~~a~~~~-G~~~~--~~~~~ggtDa~~~~~giPt~~~-~gp~-----~~~~aH~~dE~v~i~~l~~~~~il 401 (414)
T PRK12891 331 FAPGCIDAVRDAARAL-GLSHM--DIVSGAGHDACFAARGAPTGMI-FVPC-----VDGLSHNEAEAITPEWFAAGADVL 401 (414)
T ss_pred CCHHHHHHHHHHHHHc-CCCce--ecCCcchHHHHHHHhhCCEEEE-EEcC-----CCCCCCCccccCCHHHHHHHHHHH
Confidence 7889999999998765 77653 3467899998888666998543 4433 234689999999999999999999
Q ss_pred HHHHHHHHhhc
Q 013076 425 ASLALRYLLEF 435 (450)
Q Consensus 425 ~~~~~~l~~~~ 435 (450)
+.++.++.+..
T Consensus 402 ~~~l~~~~~~~ 412 (414)
T PRK12891 402 LRAVLQSAQEA 412 (414)
T ss_pred HHHHHHHhhhc
Confidence 99999997653
No 53
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.7e-43 Score=355.91 Aligned_cols=343 Identities=16% Similarity=0.182 Sum_probs=265.1
Q ss_pred HHHHHHHHhHcCC---------CCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC--CCceEEEEeeccCCCC
Q 013076 56 WMIGIRRKIHQNP---------ELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG--EPPFVALRADMDSLPL 124 (450)
Q Consensus 56 ~~~~~l~~l~~ip---------s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~--~~~~ill~~H~DvVp~ 124 (450)
.+++.+.+|.+|| |++++|.++++||.++|+++||++++. ...|++|++++. ++|+|+|+|||||||+
T Consensus 10 ~~~~~~~~~~~i~~~~~~~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nlia~~~g~~~~~~~l~~~~H~DtVp~ 88 (414)
T PRK12890 10 RLLARLEELAAIGRDGPGWTRLALSDEERAARALLAAWMRAAGLEVRRD-AAGNLFGRLPGRDPDLPPLMTGSHLDTVPN 88 (414)
T ss_pred HHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEc-CCCcEEEEeCCCCCCCCEEEEeCcccCCCC
Confidence 3555666666555 778999999999999999999999865 367999999764 3589999999999997
Q ss_pred cCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-c-----cchHHHHHc--------
Q 013076 125 QEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG-G-----GGAHKVLEA-------- 190 (450)
Q Consensus 125 ~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg-~-----~Ga~~l~~~-------- 190 (450)
+ |.. +.|++++++|.|+++|++.+..++++|.|++++|||+ + .|++.+.+.
T Consensus 89 ~------------g~~---D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~~ 153 (414)
T PRK12890 89 G------------GRY---DGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVLA 153 (414)
T ss_pred C------------CCc---CCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHHh
Confidence 4 222 3378999999999999988878899999999999993 2 466655432
Q ss_pred ----------------ccccccce-------------EEEeccCCCC---CCceEEeecCcccccceEEEEEEEecCCCC
Q 013076 191 ----------------GVLEKVNA-------------IFGLHVDPNL---PIGEVASRPGPLLAGSGFFEAVIGGKGGHA 238 (450)
Q Consensus 191 ----------------~~~~~~d~-------------~i~~~~~~~~---~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hs 238 (450)
|. ..|. .+.+|.+.+. +.+. ......+++|..|++|+++|+++|+
T Consensus 154 ~~~~~~~~~~~~~~~~g~--~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~Gk~aHa 230 (414)
T PRK12890 154 TRDDDGTTLAEALRRIGG--DPDALPGALRPPGAVAAFLELHIEQGPVLEAEGL-PIGVVTAIQGIRRQAVTVEGEANHA 230 (414)
T ss_pred ccCCCCCCHHHHHHHcCC--ChhhccccccCCCCccEEEEEeeCcCHHHHhCCC-ceEEEEeecCcEEEEEEEEEECCCC
Confidence 11 1122 1111211100 0010 0112245789999999999999999
Q ss_pred CC-CCC-CCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecC-CCCCCCCCeEEEEEEEecCChhhHHHHHHHHHH
Q 013076 239 AI-PQH-SIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (450)
Q Consensus 239 s~-p~~-g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~ 315 (450)
|. |+. +.|||..+++++.+|+++..+.. ...+++++.|++| .+.|+||++|++.+|+|+.|+++.++++++|++
T Consensus 231 s~~P~~~g~nAI~~~~~~i~~l~~~~~~~~---~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~ 307 (414)
T PRK12890 231 GTTPMDLRRDALVAAAELVTAMERRARALL---HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALLA 307 (414)
T ss_pred CcCChhhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHHH
Confidence 85 864 58999999999999998753321 4568899999975 799999999999999999999999999999999
Q ss_pred HHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEeccc
Q 013076 316 VIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMK 395 (450)
Q Consensus 316 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~ 395 (450)
++++.+..++++++++. ...++++..|+++++.+.+++++. |.++. ...++|+||+++|.+..|.+++ +||.
T Consensus 308 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~gp~~~~-~gp~ 379 (414)
T PRK12890 308 ELEAIAAARGVRIELER----LSRSEPVPCDPALVDAVEAAAARL-GYPSR--RMPSGAGHDAAAIARIGPSAMI-FVPC 379 (414)
T ss_pred HHHHHHHHhCCeEEEEE----eecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCCcccHHHHHHHhhCCEEEE-EecC
Confidence 99988777777777765 334566677899999999999885 87653 3467899999999987765543 4543
Q ss_pred CCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 396 NETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 396 ~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
....+|++||++++++|.+++++|+.++.++..
T Consensus 380 -----~~~~aHs~dE~v~i~~l~~~~~i~~~ll~~l~~ 412 (414)
T PRK12890 380 -----RGGISHNPEEAMDPEDLAAGARVLLDAVLRLDR 412 (414)
T ss_pred -----CCCCCCCcCccCCHHHHHHHHHHHHHHHHHHhh
Confidence 234699999999999999999999999988853
No 54
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=2.7e-43 Score=355.24 Aligned_cols=344 Identities=15% Similarity=0.133 Sum_probs=251.0
Q ss_pred HHHHHHHHHhHcCCCCCcc------------hHHHHHHHHHHHHhcCCceecccCCceEEE--EEcCCCCceEEEEeecc
Q 013076 55 GWMIGIRRKIHQNPELGYQ------------EFETSQLIRSELDKMGIKYKHPVAVTGVVG--FIGTGEPPFVALRADMD 120 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~------------e~~~~~~l~~~l~~~G~~~~~~~~~~nvva--~~~~~~~~~ill~~H~D 120 (450)
+++++++++|++|||++++ +.++++|+.++|+++|++++.. .|+++ .++++ .|+|+|+||+|
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~---~~~~~~~~~~~~-~~~l~l~gH~D 77 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGFTTENV---DNYAGYAEYGQG-EEYLGILGHLD 77 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCceEEEe---cCceEEEEeCCC-CCeEEEEeecC
Confidence 5689999999999999832 3689999999999999998743 24333 33322 48999999999
Q ss_pred CCCCcCcCCCc---ccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHccc
Q 013076 121 SLPLQEMVEWE---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGV 192 (450)
Q Consensus 121 vVp~~~~~~w~---~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~ 192 (450)
|||+++ .|. |.. ++||+|||||+ ||++++++.|++.|++.+.+++++|.|+|++||| |+.|+++++++..
T Consensus 78 ~Vp~~~--~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~ 155 (447)
T TIGR01887 78 VVPAGD--GWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEE 155 (447)
T ss_pred CCCCCC--CCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcC
Confidence 999875 584 443 45899999998 9999999999999999888889999999999999 7789999887532
Q ss_pred cc----ccc----eEEEec---------------------cCCCCCCceEE--eecCcccc-------------------
Q 013076 193 LE----KVN----AIFGLH---------------------VDPNLPIGEVA--SRPGPLLA------------------- 222 (450)
Q Consensus 193 ~~----~~d----~~i~~~---------------------~~~~~~~g~~~--~~~g~~~~------------------- 222 (450)
.. ..| ++++.. ...++|++.+. ......++
T Consensus 156 ~~~~~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~ 235 (447)
T TIGR01887 156 APDIGFTPDAEFPIIYGEKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELE 235 (447)
T ss_pred CCCEEEeCCCCcceEEEecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcc
Confidence 11 112 222210 00122333210 00001122
Q ss_pred cce-----EEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHh--hhhcc---------------------c-CCCCCCce
Q 013076 223 GSG-----FFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQ--HLVSR---------------------E-ADPLDSQV 273 (450)
Q Consensus 223 G~~-----~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~--~~~~~---------------------~-~~~~~~~t 273 (450)
|.+ +++|+++|+++|+|.|+.|.|||..|++++..+. +...+ . ...++.++
T Consensus 236 g~~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t 315 (447)
T TIGR01887 236 GSFEVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLT 315 (447)
T ss_pred eEEEecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcE
Confidence 555 7999999999999999999999999999999986 21100 0 01135678
Q ss_pred EEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCc-cCChHHHHH
Q 013076 274 VTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPT-INNNDLHKY 352 (450)
Q Consensus 274 ~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~d~~~~~~ 352 (450)
+|++.|+|| +|++|++.+|+|++|+++.+++.+++.+.+. +. .++... ....|.+ +.|+++++.
T Consensus 316 ~nvg~I~~g-----~p~~~~~~~d~R~~p~~~~e~~~~~i~~~~~------~~-~~~~~~---~~~~p~~~~~~~~lv~~ 380 (447)
T TIGR01887 316 MNVGVIDYE-----NAEAGLIGLNVRYPVGNDPDTMLKNELAKES------GI-VEVTEN---GYLKPLYVPKDDPLVQT 380 (447)
T ss_pred EEEEEEEEe-----CCcEEEEEEEEecCCCCCHHHHHHHHHHHhh------Cc-EEEEEc---cCCCCeEECCCCHHHHH
Confidence 999999988 4999999999999999999987777764432 11 222221 1111222 346789999
Q ss_pred HHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHH
Q 013076 353 FQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLA 428 (450)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~ 428 (450)
+.+++++.+|.++ .+...+|+||++++. . .+.|||.. ||+..++|++||++++++|..++++|..++
T Consensus 381 l~~~~~~~~g~~~--~~~~~~ggtda~~~~----~-~i~~Gp~~--pG~~~~aH~~dE~v~i~~l~~~~~i~~~~~ 447 (447)
T TIGR01887 381 LMKVYEKQTGDEG--TPVAIGGGTYARLME----N-GVAFGALF--PGEEDTMHQANEYIMIDDLLLATAIYAEAI 447 (447)
T ss_pred HHHHHHHHhCCCC--CeeEecchhhhhhCC----C-cEEeCCCC--CCCCCCccCCCcceeHHHHHHHHHHHHHhC
Confidence 9999999988765 345678888887653 2 35678766 677788999999999999999999998763
No 55
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=7.8e-43 Score=349.37 Aligned_cols=330 Identities=17% Similarity=0.189 Sum_probs=258.4
Q ss_pred CCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC-C-CceEEEEeeccCCCCcCcCCCccccCCCCceecccch
Q 013076 69 ELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG-E-PPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHD 146 (450)
Q Consensus 69 s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~-~-~~~ill~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~k 146 (450)
|.+++|.++++||+++|+++|++++++ ...||+|+++++ + +|+|+|.||+||||.+ |+++|+
T Consensus 25 ~~~~~e~~~~~~l~~~~~~~G~~~~~~-~~~nl~a~~~g~~~~~~~l~~~~H~DtV~~g------------g~~dg~--- 88 (401)
T TIGR01879 25 ALSPEDREAQDLFKKRMRAAGLEVRFD-EVGNLIGRKEGTEPPLEVVLSGSHIDTVVNG------------GNFDGQ--- 88 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEe-cCCcEEEEecCCCCCCCEEEEecccccCCCC------------CccCCH---
Confidence 346789999999999999999999865 457999999764 3 4899999999999974 455665
Q ss_pred HHHHHHHHHHHHHHhccccCCceEEEEEecCCCC------ccchHHHHHcccc---------------------------
Q 013076 147 GHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG------GGGAHKVLEAGVL--------------------------- 193 (450)
Q Consensus 147 g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg------~~Ga~~l~~~~~~--------------------------- 193 (450)
.+++++|.++++|++.+.+++++|.|++++|||+ ..|++.++.....
T Consensus 89 ~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 168 (401)
T TIGR01879 89 LGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDLPN 168 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCccc
Confidence 4889999999999999989999999999999995 2688777642100
Q ss_pred ------cccceEEEeccCCCC---CCceEEeecCcccccceEEEEEEEecCCCCCC-CC-CCCcHHHHHHHHHHHHhhhh
Q 013076 194 ------EKVNAIFGLHVDPNL---PIGEVASRPGPLLAGSGFFEAVIGGKGGHAAI-PQ-HSIDPILAASNVIVSLQHLV 262 (450)
Q Consensus 194 ------~~~d~~i~~~~~~~~---~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~-p~-~g~nAi~~~~~~l~~l~~~~ 262 (450)
.++++.+.+|.+.+. +.|.. .....+++|..|++|+++|+++|++. |+ .|.|||..+++++.+|+++.
T Consensus 169 ~~~~~~~~~~~~~e~Hieqg~~l~~~g~~-~~v~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~ 247 (401)
T TIGR01879 169 QPLRPRGDIKAYVELHIEQGPVLESNGQP-IGVVNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEKA 247 (401)
T ss_pred ccccccccccEEEEEEEcCCcChhhCCCe-EEEEEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence 011223444443321 11110 11224578999999999999999985 54 57999999999999999875
Q ss_pred cccCCCCCCceEEEEEEecC-CCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCC
Q 013076 263 SREADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFP 341 (450)
Q Consensus 263 ~~~~~~~~~~t~~i~~i~gG-~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 341 (450)
.+.. ...+.+++.|++| ...|+||++|++.+|+|+.|+++.+++.++|++.++..+...+++++++. ...++
T Consensus 248 ~~~~---~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~~~~~~~~~~~~~~~~----~~~~~ 320 (401)
T TIGR01879 248 KRMG---DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDIKAISDERDIGIDIER----WMDEE 320 (401)
T ss_pred HhcC---CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCceEEEEE----eecCC
Confidence 4321 2357899999985 67999999999999999999999999999999999988777777777765 23456
Q ss_pred CccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHH
Q 013076 342 PTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGA 421 (450)
Q Consensus 342 ~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~ 421 (450)
+...|+++++.+++++++. |.++. ...++|+||+++|.+..|..+ .|||+ ....+|++||+++++++.+++
T Consensus 321 ~~~~d~~lv~~l~~a~~~~-g~~~~--~~~~~ggtDa~~~~~~~~~~v-~fgPg-----~~~~aH~~dE~v~~e~l~~~~ 391 (401)
T TIGR01879 321 PVPCSEELVAALTELCERL-GYNAR--VMVSGAGHDAQILAPIVPIGM-IFIPS-----INGISHNPAEWSNITDCAEGA 391 (401)
T ss_pred CcCCCHHHHHHHHHHHHHc-CCCcc--ccccchHHHHHHHHhhCCEEE-EEecC-----CCCCcCCCCccCCHHHHHHHH
Confidence 6777999999999999976 76653 346789999999998755333 36643 345689999999999999999
Q ss_pred HHHHHHHHHH
Q 013076 422 ALHASLALRY 431 (450)
Q Consensus 422 ~~~~~~~~~l 431 (450)
++|+.++.++
T Consensus 392 ~vl~~~i~~l 401 (401)
T TIGR01879 392 KVLYLMVYQL 401 (401)
T ss_pred HHHHHHHHhC
Confidence 9999998753
No 56
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=5.6e-43 Score=357.51 Aligned_cols=348 Identities=16% Similarity=0.157 Sum_probs=259.4
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC----CCceEEEEeeccCCCCcCc---
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG----EPPFVALRADMDSLPLQEM--- 127 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~----~~~~ill~~H~DvVp~~~~--- 127 (450)
+++++++++|++|||+|++|.++++||+++|+++|++++++. ..|+++++++. ..|+|+|.|||||||++..
T Consensus 4 ~~~~~~l~~l~~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~~ 82 (477)
T TIGR01893 4 SRVFKYFEEISKIPRPSKNEKEVSNFIVNWAKKLGLEVKQDE-VGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDSL 82 (477)
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHcCCeEEEeC-CCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCCC
Confidence 678999999999999999999999999999999999988654 57999998542 2489999999999998653
Q ss_pred CCCc---ccc-CCCCceecccc------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHccccccc
Q 013076 128 VEWE---YKS-KIPGKMHACGH------DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKV 196 (450)
Q Consensus 128 ~~w~---~~~-~~~g~l~GrG~------kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~ 196 (450)
..|. |.. .+||++||||+ |++++++|.+++. .+ ..+++|.++|++||| ++.|++.+..+.. ..
T Consensus 83 ~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~-~~~~~i~~~~~~dEE~g~~Gs~~l~~~~~--~~ 156 (477)
T TIGR01893 83 HDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NN-LKHPPLELLFTVDEETGMDGALGLDENWL--SG 156 (477)
T ss_pred CCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CC-CCCCCEEEEEEeccccCchhhhhcChhhc--CC
Confidence 3574 443 46899999995 6888888877653 33 356799999999999 6689999876432 22
Q ss_pred ceEEEeccCC------CCCCce-----EEeecCcccccceEEEEEEEe-cCCCCC-CCCCCC-cHHHHHHHHHHHHhhhh
Q 013076 197 NAIFGLHVDP------NLPIGE-----VASRPGPLLAGSGFFEAVIGG-KGGHAA-IPQHSI-DPILAASNVIVSLQHLV 262 (450)
Q Consensus 197 d~~i~~~~~~------~~~~g~-----~~~~~g~~~~G~~~~~i~v~G-~~~Hss-~p~~g~-nAi~~~~~~l~~l~~~~ 262 (450)
++++..+... +.+.+. +.......++|..+++|+++| +++||| .|+.++ ||+..+++++.++++..
T Consensus 157 ~~~~~~d~~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~~~ 236 (477)
T TIGR01893 157 KILINIDSEEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARVLNELKENL 236 (477)
T ss_pred cEEEEecCCCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhhhcC
Confidence 4444322100 011110 000011125799999999999 999998 598985 99999999999998752
Q ss_pred cccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHh--hC---------------
Q 013076 263 SREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAV--QR--------------- 325 (450)
Q Consensus 263 ~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~--~~--------------- 325 (450)
..+++.+.||.+.|+||++|++.+|+|.......+.+.+.+.+.++..... .+
T Consensus 237 ----------~~~v~~~~gg~~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (477)
T TIGR01893 237 ----------NFRLSDIKGGSKRNAIPREAKALIAIDENDVKLLENLVKNFQSKFKSEYSELEPNITIEVSKRENSVKVF 306 (477)
T ss_pred ----------CeEEEEEeCCCcccccCCceEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEECCCccccc
Confidence 267899999999999999999999999777777776666666655543311 00
Q ss_pred -------------------------------------------------------------------------CeEEEEe
Q 013076 326 -------------------------------------------------------------------------CSATVDF 332 (450)
Q Consensus 326 -------------------------------------------------------------------------~~~~i~~ 332 (450)
..++++.
T Consensus 307 d~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~t~n~g~i~~~~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~~~~v~~ 386 (477)
T TIGR01893 307 SENTTDKLINALNGLPNGVQSVSDEEPGLVESSLNLGVVKTKENKVIFTFLIRSSVESDKDYVTEKIESIAKLAGARVEV 386 (477)
T ss_pred CHHHHHHHHHHHHHCCccceeeccCCCCeEEeeeeEEEEEEcCCEEEEEEEeCCCCchhHHHHHHHHHHHhhhcCeEEEE
Confidence 1122322
Q ss_pred eccCCCCCCCc--cCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeE-EEEecccCCCCCCCCCCCCCC
Q 013076 333 LSKEKPFFPPT--INNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGY-FFFLGMKNETLGKVESIHSPY 409 (450)
Q Consensus 333 ~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~-~~~~G~~~~~pg~~~~~H~~~ 409 (450)
...++++ +.|+++++.+.+++++.+|.++. ....+|++|+++|.+.+|.+ ++++||.. ..+|++|
T Consensus 387 ----~~~~~p~~~~~d~plv~~l~~a~~~~~g~~~~--~~~~~Ggtd~~~~~~~~~~i~~v~~Gp~~------~~~H~~n 454 (477)
T TIGR01893 387 ----SAGYPSWQPDPQSNLLDTARKVYSEMFGEDPE--VKVIHAGLECGIISSKIPDIDMISIGPNI------YDPHSPN 454 (477)
T ss_pred ----ecCCCcccCCCCCHHHHHHHHHHHHHHCCCCe--EEEeecCccHHHHHhhCCCceEEEeCCCC------CCCCCCC
Confidence 1233444 35788999999999999898763 45788999999998765543 45688653 4599999
Q ss_pred cccCCCccHHHHHHHHHHHHHH
Q 013076 410 FTLNEDALPYGAALHASLALRY 431 (450)
Q Consensus 410 E~i~~~~l~~~~~~~~~~~~~l 431 (450)
|+|++++|.+++++|.+++..+
T Consensus 455 E~i~i~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 455 ERVSISSVEKVWDFLVKVLERL 476 (477)
T ss_pred ceeeHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999998654
No 57
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=2.9e-42 Score=349.47 Aligned_cols=343 Identities=16% Similarity=0.202 Sum_probs=259.2
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcC--C--CCceEEEEeeccCCCCcCc---
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGT--G--EPPFVALRADMDSLPLQEM--- 127 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~--~--~~~~ill~~H~DvVp~~~~--- 127 (450)
+.+++++++|++|||+|++|.++++||.++|+++|++++++. ..|+++.+++ + ..|+|+|.|||||||+++.
T Consensus 10 ~~~~~~l~~Lv~ips~S~~e~~~~~~l~~~~~~~G~~~~~d~-~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~~ 88 (485)
T PRK15026 10 QPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQ-VGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTV 88 (485)
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhCCCEEEEEe-cCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCcc
Confidence 668999999999999999999999999999999999988653 5699988753 2 2489999999999998653
Q ss_pred CCCc---ccc-CCCCceecccc------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHccccccc
Q 013076 128 VEWE---YKS-KIPGKMHACGH------DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKV 196 (450)
Q Consensus 128 ~~w~---~~~-~~~g~l~GrG~------kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~ 196 (450)
.+|. |.. ++||++||||+ |++++++|.++ ++.+. .+++|.++|++||| |+.|++.+.. .. .++
T Consensus 89 ~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~~ga~~l~~-~~-~~~ 162 (485)
T PRK15026 89 HDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGMDGAFGLQS-NW-LQA 162 (485)
T ss_pred ccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCcHhHHHhhh-cc-CCc
Confidence 2574 542 46899999986 68888877655 44443 37899999999999 7789999865 33 356
Q ss_pred ceEEEeccCCCCCCceE--EeecC------------cccccceEEEEEEEe-cCCCCC-CCCCCC-cHHHHHHHHHHHHh
Q 013076 197 NAIFGLHVDPNLPIGEV--ASRPG------------PLLAGSGFFEAVIGG-KGGHAA-IPQHSI-DPILAASNVIVSLQ 259 (450)
Q Consensus 197 d~~i~~~~~~~~~~g~~--~~~~g------------~~~~G~~~~~i~v~G-~~~Hss-~p~~g~-nAi~~~~~~l~~l~ 259 (450)
+++|.+++ . ..|.+ +++.| ...+|..+++|+++| +++||+ .|+.|+ |||..|+++|.++.
T Consensus 163 ~~~i~~e~--~-~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~~ 239 (485)
T PRK15026 163 DILINTDS--E-EEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHA 239 (485)
T ss_pred CEEEEeCC--C-CCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHhH
Confidence 88887643 2 23333 11111 112577899999999 999999 799999 99999999999854
Q ss_pred hhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHH--------------------
Q 013076 260 HLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIG-------------------- 319 (450)
Q Consensus 260 ~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~-------------------- 319 (450)
+ ..+++++.|+||++.|+||++|++.+++|....+..+.+.+.+++.+..
T Consensus 240 ~----------~~~~~v~~i~GG~~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (485)
T PRK15026 240 E----------ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQEILKNELAEKEKNLALLLDSVANDK 309 (485)
T ss_pred h----------hCCeEEEEEeCCCccCCCCCCcEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEEccccc
Confidence 2 2578999999999999999999999999987666666655555444321
Q ss_pred ------------------------------------------------------------------------HHHhhCCe
Q 013076 320 ------------------------------------------------------------------------QAAVQRCS 327 (450)
Q Consensus 320 ------------------------------------------------------------------------~~~~~~~~ 327 (450)
.+...+..
T Consensus 310 ~~~~~~~~~~~~~~l~~~~~Gv~~~s~~~~g~v~~S~Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g~~ 389 (485)
T PRK15026 310 AALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAK 389 (485)
T ss_pred cccCHHHHHHHHHHHHHCCcccEEeccCCCCeEEeeeEEEEEEEeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHcCcE
Confidence 01111111
Q ss_pred EEEEeeccCCCCCCCccC--ChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeE-EEEecccCCCCCCCCC
Q 013076 328 ATVDFLSKEKPFFPPTIN--NNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGY-FFFLGMKNETLGKVES 404 (450)
Q Consensus 328 ~~i~~~~~~~~~~~~~~~--d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~-~~~~G~~~~~pg~~~~ 404 (450)
+ +. ...+|+|.. |+++++.+.+++++++|.++ .+...+|++|++.|.+..|.+ ++.|||.. ..
T Consensus 390 ~--~~----~~~~p~w~~~~ds~lv~~l~~~y~e~~G~~~--~~~~ihaglEcG~~~~~~p~i~~VsfGP~~------~~ 455 (485)
T PRK15026 390 T--EA----KGAYPGWQPDANSPVMHLVRETYQRLFNKTP--NIQIIHAGLECGLFKKPYPEMDMVSIGPTI------TG 455 (485)
T ss_pred E--EE----eCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--eEEEEEEEehHHHHHhhCCCCCEEEECCCC------CC
Confidence 1 11 234666644 57899999999999999877 356788999999999764442 45688764 34
Q ss_pred CCCCCcccCCCccHHHHHHHHHHHHHH
Q 013076 405 IHSPYFTLNEDALPYGAALHASLALRY 431 (450)
Q Consensus 405 ~H~~~E~i~~~~l~~~~~~~~~~~~~l 431 (450)
+|+|||+++++++....+++..++.++
T Consensus 456 ~HspdE~v~I~s~~~~~~~l~~~l~~~ 482 (485)
T PRK15026 456 PHSPDEQVHIESVGHYWTLLTELLKEI 482 (485)
T ss_pred CCCCCcEEEhHHHHHHHHHHHHHHHhh
Confidence 999999999999977777777666665
No 58
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-41 Score=318.08 Aligned_cols=362 Identities=17% Similarity=0.181 Sum_probs=277.3
Q ss_pred HHHHHHHHHhHcCCCCCcc--hH-HHHHHHHHHHHhcCCceec---ccCCceEEEEEcCC-C-CceEEEEeeccCCCCcC
Q 013076 55 GWMIGIRRKIHQNPELGYQ--EF-ETSQLIRSELDKMGIKYKH---PVAVTGVVGFIGTG-E-PPFVALRADMDSLPLQE 126 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~--e~-~~~~~l~~~l~~~G~~~~~---~~~~~nvva~~~~~-~-~~~ill~~H~DvVp~~~ 126 (450)
...+..++++++||++-.+ -. .+++|+.++.+.+|+.++. ..+.++++.+|.|+ + -++|+|++|+||||+-.
T Consensus 25 ~~~v~~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f~ 104 (420)
T KOG2275|consen 25 NISVTRFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVFR 104 (420)
T ss_pred chHHHHHHHHhhccccccCCCccHHHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCCc
Confidence 5688899999999998543 23 7899999999999998764 34577888888665 3 48999999999999854
Q ss_pred cCCCcccc-----CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-C-ccchHHHHHccccccc
Q 013076 127 MVEWEYKS-----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-G-GGGAHKVLEAGVLEKV 196 (450)
Q Consensus 127 ~~~w~~~~-----~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g-~~Ga~~l~~~~~~~~~ 196 (450)
..|++++ .++|.|||||+ |+..++.|.|++.|+..+.+++++|.+.|++||| + ..|++.+.+...+++.
T Consensus 105 -e~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~l 183 (420)
T KOG2275|consen 105 -EKWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKKL 183 (420)
T ss_pred -ccCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhccc
Confidence 5897663 36899999998 8999999999999999999999999999999999 4 4899988874344444
Q ss_pred ceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcc---------cCC
Q 013076 197 NAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSR---------EAD 267 (450)
Q Consensus 197 d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~---------~~~ 267 (450)
...++++. ++ ++-.-..+.+.++||.+|++|+++|.+||+|.|.. ..|+..+.+++.++.++... ...
T Consensus 184 ~~~filDE-G~-~se~d~~~vfyaEkg~w~~~v~~~G~~GHss~~~~-nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~ 260 (420)
T KOG2275|consen 184 NLGFILDE-GG-ATENDFATVFYAEKGPWWLKVTANGTPGHSSYPPP-NTAIEKLEKLVESLEEFREKQVDLLASGPKLA 260 (420)
T ss_pred ceeEEecC-CC-CCcccceeEEEEeeceeEEEEEecCCCCCCCCCCC-ccHHHHHHHHHHHHHHhHHHHHHHhhcCCcee
Confidence 44454432 21 12111245567889999999999999999998422 36777777777777766421 112
Q ss_pred CCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHH-HHHHHHHHHhhCCeEEEEeecc---CCCCCCCc
Q 013076 268 PLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRI-EEVIIGQAAVQRCSATVDFLSK---EKPFFPPT 343 (450)
Q Consensus 268 ~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~ 343 (450)
....+|+|++.|+||.+.|++|+.+++.+|+|..+..+.+++.+++ +++.+ +++-.+++++... ..++..+.
T Consensus 261 ~~~vtT~Nv~~i~GGv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~----~~~eg~t~~f~~~~~~~~~~~t~~ 336 (420)
T KOG2275|consen 261 LGDVTTINVGIINGGVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAE----EAGEGVTLEFSQKVILDYPPVTPT 336 (420)
T ss_pred ccceeEEeeeeeecccccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhh----hcCCceEEeccCcccCCCCCCCCC
Confidence 3467899999999999999999999999999999999999999998 55544 4455566665322 11222223
Q ss_pred cCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHH
Q 013076 344 INNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAA 422 (450)
Q Consensus 344 ~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~ 422 (450)
..+.+++..+..+.++. +.+. .+...+|+||.+++++. +|.. +|-|.... ....|..||++..+.+.++++
T Consensus 337 ~~s~p~w~~~~~a~~~~-~~k~--~~~i~~gstdsr~~rn~gvp~~--~fsp~~nt---~~~~H~hnE~l~~~~~l~gi~ 408 (420)
T KOG2275|consen 337 DDSNPFWTAFAGALKDE-GGKG--YPEIGPGSTDSRHIRNEGVPAI--GFSPIINT---PMLLHDHNEFLNEKVFLRGIE 408 (420)
T ss_pred CCCChHHHHHHHHHHHh-cCcc--ceeecccccccchhhhcCcchh--cccccccc---cceecchhhhhCchhhhhhhh
Confidence 34567999999999988 4443 25678999999999988 8853 34443322 467999999999999999999
Q ss_pred HHHHHHHHHH
Q 013076 423 LHASLALRYL 432 (450)
Q Consensus 423 ~~~~~~~~l~ 432 (450)
+|..++.++.
T Consensus 409 ~~~~~i~~~~ 418 (420)
T KOG2275|consen 409 IYYTIIVNLA 418 (420)
T ss_pred HHHHHHHhhc
Confidence 9999877664
No 59
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-41 Score=316.47 Aligned_cols=373 Identities=17% Similarity=0.181 Sum_probs=294.2
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcch------HHHHHHHHHHHHhcCCceecc-------------cCCceE
Q 013076 41 PKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQE------FETSQLIRSELDKMGIKYKHP-------------VAVTGV 101 (450)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e------~~~~~~l~~~l~~~G~~~~~~-------------~~~~nv 101 (450)
-.++.++++.++ +++++.|++.++|+|+|... +++++|++++|.++|-+++.. ...+.|
T Consensus 4 l~~~fq~id~~~--de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvv 81 (473)
T KOG2276|consen 4 LTKVFQSIDLNK--DEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVV 81 (473)
T ss_pred HHHHHHHhhccH--HHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhh
Confidence 356889999999 99999999999999998754 578999999999999776641 123457
Q ss_pred EEEEcCCC-CceEEEEeeccCCCCcCcCCCccc----cCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEE
Q 013076 102 VGFIGTGE-PPFVALRADMDSLPLQEMVEWEYK----SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLV 173 (450)
Q Consensus 102 va~~~~~~-~~~ill~~H~DvVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~ 173 (450)
.+++|+.+ +++++++|||||+|++..++|.++ ++.||+|||||+ ||++++++.|++++++.++.++.||+|+
T Consensus 82 l~~~Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~ 161 (473)
T KOG2276|consen 82 LGVLGSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFV 161 (473)
T ss_pred hhcccCCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEE
Confidence 78887764 589999999999999988999654 467899999998 8999999999999999999999999999
Q ss_pred EecCCC-CccchHHHHHc---ccccccceEEEecc---CCCCCCceEEeecCcccccceEEEEEEEe--cCCCCCC-CCC
Q 013076 174 FQPAEE-GGGGAHKVLEA---GVLEKVNAIFGLHV---DPNLPIGEVASRPGPLLAGSGFFEAVIGG--KGGHAAI-PQH 243 (450)
Q Consensus 174 ~~~dEE-g~~Ga~~l~~~---~~~~~~d~~i~~~~---~~~~~~g~~~~~~g~~~~G~~~~~i~v~G--~~~Hss~-p~~ 243 (450)
|.+.|| |+.|...++++ .+++++|++...+. +...|.-+++. +|.+.+.|+|.| +..||+. ...
T Consensus 162 ~EgmEEsgS~~L~~l~~~~kD~~~~~vD~vciSdnyWlg~kkPcltyGl------RG~~yf~i~v~g~~~DlHSGvfGG~ 235 (473)
T KOG2276|consen 162 FEGMEESGSEGLDELIEKEKDKFFKDVDFVCISDNYWLGTKKPCLTYGL------RGVIYFQIEVEGPSKDLHSGVFGGV 235 (473)
T ss_pred EEechhccCccHHHHHHHHhhhhhccCCEEEeeCceeccCCCccccccc------ccceeEEEEEeecccccccccccch
Confidence 999999 88888888764 44567887765432 22233333333 499999999999 7899994 444
Q ss_pred CCcHHHHHHHHHHHHhhhhcccC------------------------------------------------CCCCCceEE
Q 013076 244 SIDPILAASNVIVSLQHLVSREA------------------------------------------------DPLDSQVVT 275 (450)
Q Consensus 244 g~nAi~~~~~~l~~l~~~~~~~~------------------------------------------------~~~~~~t~~ 275 (450)
-.-|+..|..++..|.+...+.. +...+++++
T Consensus 236 ~hE~m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryPSLs 315 (473)
T KOG2276|consen 236 VHEAMNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYPSLS 315 (473)
T ss_pred hHHHHHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccCccc
Confidence 45777777777777754332100 125688999
Q ss_pred EEEEecC----CCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeE--EEEeeccCCCCCCCc--cCCh
Q 013076 276 VAKFQGG----GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSA--TVDFLSKEKPFFPPT--INNN 347 (450)
Q Consensus 276 i~~i~gG----~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~--~~d~ 347 (450)
++.|.|. .+..|||.++.-.|.+|++|.++++.+.+.+.++++....+.+... +++. .....+| ..|+
T Consensus 316 ihgIeGaFs~pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl~~~f~~~nS~N~l~~~~----~~~~~~Wv~d~~~ 391 (473)
T KOG2276|consen 316 IHGIEGAFSGPGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYLEKVFAELNSPNKLKVSM----GHAGAPWVSDPDD 391 (473)
T ss_pred eecccceeeCCCceEEeehhheeeeEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEee----cCCCCceecCCCc
Confidence 9999864 4778999999999999999999999999999999998776665543 4444 2333334 3456
Q ss_pred HHHHHHHHHHHhhcCCccccccCCCcccchHHHHh-hh--cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHH
Q 013076 348 DLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQ-EV--MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALH 424 (450)
Q Consensus 348 ~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~-~~--~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~ 424 (450)
+.+.++++|++.++|.+| ...+.+|+-+..... +. .+.+...+|... +++|+.||++++.++.++++++
T Consensus 392 ~~y~a~krA~~~v~gveP--d~~ReGgSIPvt~tfQ~~~~~~V~llP~G~~d------D~aHsqNEkl~i~N~~~G~k~l 463 (473)
T KOG2276|consen 392 PHYLALKRAIETVYGVEP--DFTREGGSIPVTLTFQDITGKSVLLLPYGASD------DGAHSQNEKLNITNYVEGTKVL 463 (473)
T ss_pred hhHHHHHHHHHHhhCCCC--CccccCCccceehHHHHHhCCCeEEecccccc------cchhhhcccccHHHHhhhHHHH
Confidence 789999999999999987 567788888876644 43 466666677654 5699999999999999999999
Q ss_pred HHHHHHHHh
Q 013076 425 ASLALRYLL 433 (450)
Q Consensus 425 ~~~~~~l~~ 433 (450)
++++.++.+
T Consensus 464 ~ay~~el~~ 472 (473)
T KOG2276|consen 464 AAYISELAQ 472 (473)
T ss_pred HHHHHHHhc
Confidence 999988753
No 60
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=1.4e-40 Score=332.41 Aligned_cols=345 Identities=14% Similarity=0.146 Sum_probs=267.3
Q ss_pred HHHHHHHHHhHcC-CC---------CCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCC--CceEEEEeeccCC
Q 013076 55 GWMIGIRRKIHQN-PE---------LGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGE--PPFVALRADMDSL 122 (450)
Q Consensus 55 ~~~~~~l~~l~~i-ps---------~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~--~~~ill~~H~DvV 122 (450)
..+.+.+.+|-+| .. .|.++.++.+|+.+||+++|++++.+. -+|+++++++.. .|+|++.+|||||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~Gl~v~~D~-~gN~~~~~~g~~~~~~~i~~gsHlDtv 81 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESGLETRFDD-VGNLYGRLVGTEFPEETILTGSHIDTV 81 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEecCCCCCCCeEEEeccccCC
Confidence 4456666666665 22 133568899999999999999988654 579999997652 4899999999999
Q ss_pred CCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC------ccchHHHHHc------
Q 013076 123 PLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG------GGGAHKVLEA------ 190 (450)
Q Consensus 123 p~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg------~~Ga~~l~~~------ 190 (450)
|.+. +.-|. .|+++.|.+++.|++++.+++++|.+++.++||| ..|++.+...
T Consensus 82 ~~gG------------~~dg~---~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~ 146 (406)
T TIGR03176 82 VNGG------------NLDGQ---FGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDV 146 (406)
T ss_pred CCCC------------ccCch---hhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHH
Confidence 9752 22222 5889999999999999999999999999999996 3566665520
Q ss_pred ------------------cc--------ccccceEEEeccCCCC--C-Cce-EEeecCcccccceEEEEEEEecCCCCCC
Q 013076 191 ------------------GV--------LEKVNAIFGLHVDPNL--P-IGE-VASRPGPLLAGSGFFEAVIGGKGGHAAI 240 (450)
Q Consensus 191 ------------------~~--------~~~~d~~i~~~~~~~~--~-~g~-~~~~~g~~~~G~~~~~i~v~G~~~Hss~ 240 (450)
|+ ..++++.+.+|.+.+. . .|. +++. .+++|..+++|+++|+++|+|.
T Consensus 147 ~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~elHieqG~~Le~~g~~igiv--~~~~G~~~~~v~v~GkaaHag~ 224 (406)
T TIGR03176 147 RTIEDAKGIKFVDAMHACGFDLRKAPTVRDDIKAFVELHIEQGCVLESEGQSIGVV--NAIVGQRRYTVNLKGEANHAGT 224 (406)
T ss_pred HhCcCCCCCCHHHHHHHcCCCcccccccccccceEEEEEECCCcchHHCCCeEEEE--eecccceEEEEEEEEECCCCCC
Confidence 10 0134567778875531 1 121 2222 3467999999999999999997
Q ss_pred CCC--CCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEe-cCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHH
Q 013076 241 PQH--SIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQ-GGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVI 317 (450)
Q Consensus 241 p~~--g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~-gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~ 317 (450)
|.. +.||+..+++++..+.++..+. ....++|++.|+ +|.+.|+||++|++.+|+|+.+.++.+.+.++|++.+
T Consensus 225 ~p~~~r~dAi~aaa~~i~~l~~~~~~~---~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i 301 (406)
T TIGR03176 225 TPMSYRRDTVYAFSRICTQSIERAKEI---GDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDM 301 (406)
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHhc---CCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 544 4899999999999998875321 234689999999 5789999999999999999999999999999999999
Q ss_pred HHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEecccCC
Q 013076 318 IGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNE 397 (450)
Q Consensus 318 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~ 397 (450)
++.+..++++++++.. ... ++...|+++++.+++++++. +..+ ....++|++|+++|.+.+|++++ |||..
T Consensus 302 ~~ia~~~g~~~ei~~~---~~~-~p~~~d~~lv~~l~~a~~~~-~~~~--~~~~sggg~Da~~~~~~vP~~~i-fgp~~- 372 (406)
T TIGR03176 302 KAIADEMDITIDIDLW---MDE-APVPMNKEIVAIIEQLAKAE-KLNY--RLMHSGAGHDAQIFAPRVPTAMI-FVPSI- 372 (406)
T ss_pred HHHHHHcCCeEEEEEE---ecC-CCCCCCHHHHHHHHHHHHHc-CCCc--eecCcccHHHHHHHHHHCCEEEE-EEeCC-
Confidence 9988888888877642 122 33455789999999999987 4333 24567899999999988998654 45432
Q ss_pred CCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 398 TLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 398 ~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
....|+|||+++++++..++++|..++.+++.
T Consensus 373 ----~g~~H~p~E~v~~e~l~~g~~vl~~~l~~l~~ 404 (406)
T TIGR03176 373 ----GGISHNPAERTNIEDLVEGVKTLADMLYELAY 404 (406)
T ss_pred ----CCCCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 24589999999999999999999999998875
No 61
>PRK08554 peptidase; Reviewed
Probab=100.00 E-value=1.5e-41 Score=341.96 Aligned_cols=355 Identities=21% Similarity=0.232 Sum_probs=251.4
Q ss_pred HHHHHHHHhHcCCCCCcc------hHHHHHHHHHHHHhcCCceecc--cCCceEEEEEcCCCCceEEEEeeccCCCCcCc
Q 013076 56 WMIGIRRKIHQNPELGYQ------EFETSQLIRSELDKMGIKYKHP--VAVTGVVGFIGTGEPPFVALRADMDSLPLQEM 127 (450)
Q Consensus 56 ~~~~~l~~l~~ips~s~~------e~~~~~~l~~~l~~~G~~~~~~--~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~ 127 (450)
++++++++|++|||+++. +.++++|++++|+++||+++.. .+.+|+++.++++ .++|+|+||+||||+++
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~~~~-~~~l~l~gH~DtVp~~~- 79 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGIESELIEKDGYYAVYGEIGEG-KPKLLFMAHFDVVPVNP- 79 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCCeEEEEecCCceEEEEEeCCC-CCEEEEEeccccCCCCc-
Confidence 478899999999998753 4789999999999999998642 2457999998644 37899999999999865
Q ss_pred CCCc---ccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHccc--ccccc
Q 013076 128 VEWE---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGV--LEKVN 197 (450)
Q Consensus 128 ~~w~---~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~--~~~~d 197 (450)
..|. |.+ ++||++||||+ ||+++++|+|+++|++. .++++|.|+|++||| ++.++.++++... ...+|
T Consensus 80 ~~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~--~~~~~i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~ 157 (438)
T PRK08554 80 EEWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKE--PLNGKVIFAFTGDEEIGGAMAMHIAEKLREEGKLPK 157 (438)
T ss_pred cccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhc--CCCCCEEEEEEcccccCccccHHHHHHHHhcCCCCC
Confidence 3574 553 56899999996 99999999999999874 367899999999999 6655556655321 12467
Q ss_pred eEEEeccCCCCCCceEEeecCcc-----------cccc---eEEEEEEEecC-CCCCCCCCCCc--HHHHHHHHHHHHhh
Q 013076 198 AIFGLHVDPNLPIGEVASRPGPL-----------LAGS---GFFEAVIGGKG-GHAAIPQHSID--PILAASNVIVSLQH 260 (450)
Q Consensus 198 ~~i~~~~~~~~~~g~~~~~~g~~-----------~~G~---~~~~i~v~G~~-~Hss~p~~g~n--Ai~~~~~~l~~l~~ 260 (450)
++|+.. |......+..+.|.. -.|. .++.+++.|.+ +|++.+..|.| |+..+++++.++..
T Consensus 158 ~~iv~E--pt~~~~~~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~~~~~~~ 235 (438)
T PRK08554 158 YMINAD--GIGMKPIIRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHFLRESNV 235 (438)
T ss_pred EEEEeC--CCCCcchhhcCCceEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHHHHHhhcCc
Confidence 777643 321111111111100 0122 35555566665 99998766655 58888888877764
Q ss_pred hhc----c-cCCCCCCceEEEEEE--ecCC-----------------------------------CCCCC---CCeEEEE
Q 013076 261 LVS----R-EADPLDSQVVTVAKF--QGGG-----------------------------------AFNVI---PDSVLIG 295 (450)
Q Consensus 261 ~~~----~-~~~~~~~~t~~i~~i--~gG~-----------------------------------~~nvi---P~~a~~~ 295 (450)
+.. . ......+..++++.. .+|. ..|++ |++|+++
T Consensus 236 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~ 315 (438)
T PRK08554 236 LAVSLEGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLK 315 (438)
T ss_pred eEEEEeeeeeecCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecCCeEEEE
Confidence 321 0 000111222333333 2333 45666 9999999
Q ss_pred EEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCccc
Q 013076 296 GTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGS 375 (450)
Q Consensus 296 idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~ 375 (450)
+|+|+.| .+.+++.++|++.++.. ..+++++++... ..+.+....|+++++.+++++++. |.++ .+...+|+
T Consensus 316 ~DiR~~~-~~~e~v~~~i~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~lv~~~~~~~~~~-g~~~--~~~~~~Gg 387 (438)
T PRK08554 316 LDIRAMS-YSKEDIERTLKEVLEFN--LPEAEVEIRTNE--KAGYLFTPPDEEIVKVALRVLKEL-GEDA--EPVEGPGA 387 (438)
T ss_pred EEEEecC-CCHHHHHHHHHHHhhcc--CCCceEEEEecc--CCCCcCCCCChHHHHHHHHHHHHh-CCCc--EEEecCCc
Confidence 9999988 68899999999988643 234556655421 223334456788999999999985 8765 45678999
Q ss_pred chHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 376 EDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 376 tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
||+++|... +|++. |||.. ..+|++|||+++++|.+++++|..++.+|+
T Consensus 388 tDa~~~~~~Gip~v~--~Gp~~------~~~H~~~E~v~i~~l~~~~~i~~~~i~~l~ 437 (438)
T PRK08554 388 SDSRYFTPYGVKAID--FGPKG------GNIHGPNEYVEIDSLKKMPEVYKRIALRLL 437 (438)
T ss_pred hHHHHHHhcCCCceE--ECCCC------CCCCCCcceEEHHHHHHHHHHHHHHHHHHh
Confidence 999999877 99876 56542 359999999999999999999999998876
No 62
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=7.2e-40 Score=340.36 Aligned_cols=346 Identities=15% Similarity=0.140 Sum_probs=271.1
Q ss_pred HHHHHHHHHhHcCCCC-------------CcchHHHHHHHHHHHHhcCC-ceecccCCceEEEEEcCC-C-CceEEEEee
Q 013076 55 GWMIGIRRKIHQNPEL-------------GYQEFETSQLIRSELDKMGI-KYKHPVAVTGVVGFIGTG-E-PPFVALRAD 118 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~-------------s~~e~~~~~~l~~~l~~~G~-~~~~~~~~~nvva~~~~~-~-~~~ill~~H 118 (450)
+.+.+.+.+|-+|+.. |..+.++++||.+||+++|+ +++++ ..+|+++++++. + .|+|++.+|
T Consensus 181 ~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~~v~~D-~~GNl~~~~~g~~~~~~~v~~gsH 259 (591)
T PRK13590 181 NDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFDEVHID-AVGNVVGRYKGSTPQAKRLLTGSH 259 (591)
T ss_pred HHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCCeeeEC-CCCCEEEEecCCCCCCCeEEEecc
Confidence 5567777888888652 22456899999999999999 88755 468999999764 3 489999999
Q ss_pred ccCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC------ccchHH------
Q 013076 119 MDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG------GGGAHK------ 186 (450)
Q Consensus 119 ~DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg------~~Ga~~------ 186 (450)
|||||.+ |+++|+ +|++++|.+++.|++.+..++++|.|+++++||+ ..|++.
T Consensus 260 lDTV~~g------------G~~DG~---~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G~~~ 324 (591)
T PRK13590 260 YDTVRNG------------GKYDGR---LGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALIGDFD 324 (591)
T ss_pred cccCCCC------------CCcccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHhCCCh
Confidence 9999864 666666 8999999999999999988889999999999996 346664
Q ss_pred --HHH---------------ccc-----------ccccceEEEeccCCCCC---Cc-eEEeecCcccccceEEEEEEEec
Q 013076 187 --VLE---------------AGV-----------LEKVNAIFGLHVDPNLP---IG-EVASRPGPLLAGSGFFEAVIGGK 234 (450)
Q Consensus 187 --l~~---------------~~~-----------~~~~d~~i~~~~~~~~~---~g-~~~~~~g~~~~G~~~~~i~v~G~ 234 (450)
+++ .|+ ...+.+.+.+|.+++.- .| .+++ ..+++|..+++|+++|+
T Consensus 325 ~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~gv--V~~~~G~~~~~v~v~Gk 402 (591)
T PRK13590 325 PAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDPARYLGFVEVHIEQGPVLNELDLPLGI--VTSINGSVRYVGEMIGM 402 (591)
T ss_pred HHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCceEE--EeeeeccEEEEEEEEeE
Confidence 222 011 01234667778776511 11 1111 13357999999999999
Q ss_pred CCCCCC-CCC-CCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEec-CCCCCCCCCeEEEEEEEecCChhhHHHHHH
Q 013076 235 GGHAAI-PQH-SIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQG-GGAFNVIPDSVLIGGTFRAFSKESFTQLKQ 311 (450)
Q Consensus 235 ~~Hss~-p~~-g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~g-G~~~nviP~~a~~~idiR~~~~~~~~~~~~ 311 (450)
++|+|. |+. +.||+..+++++..++++... ....+.+++.|++ |.+.|+||++|++.+|+|+.+.++.+.+.+
T Consensus 403 aaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~----~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~v~~ 478 (591)
T PRK13590 403 ASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ----DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDAMVA 478 (591)
T ss_pred CCCCCCCCchhcccHHHHHHHHHHHHHHHHhc----CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHHHHH
Confidence 999995 654 689999999999999886432 1234779999874 668999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEE
Q 013076 312 RIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFF 391 (450)
Q Consensus 312 ~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~ 391 (450)
+|++.+++.+..++++++++. ....++...|+++++.+.+++++. |.++. ...++|++|+++|.+.+|++++
T Consensus 479 ~i~~~i~~ia~~~g~~vei~~----~~~~~~~~~d~~lv~~~~~aa~~~-G~~~~--~~~sggg~Da~~~a~~~p~~mi- 550 (591)
T PRK13590 479 DVLAELEAICERRGLRYTLEE----TMRAAAAPSAPAWQQRWEAAVAAL-GLPLF--RMPSGAGHDAMKLHEIMPQAML- 550 (591)
T ss_pred HHHHHHHHHHHHcCCeEEEEE----eecCCCcCCCHHHHHHHHHHHHHc-CCCcc--cCCcchhHHHHHHHHHCCEEEE-
Confidence 999999999888888888876 334566677899999999999885 87653 3567899999999988885543
Q ss_pred ecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhh
Q 013076 392 LGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLE 434 (450)
Q Consensus 392 ~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 434 (450)
|||+.. ...+|+++|+++++++..++++|..++..++..
T Consensus 551 fgpg~~----~g~sH~p~E~v~~edL~~g~~vl~~ll~~l~~~ 589 (591)
T PRK13590 551 FVRGEN----AGISHNPLESSTADDMQLAVQAFQHLLDQLAAE 589 (591)
T ss_pred EEeeCC----CCCCCCCccCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 443321 145899999999999999999999999888753
No 63
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=337.79 Aligned_cols=345 Identities=18% Similarity=0.205 Sum_probs=274.5
Q ss_pred HHHHHHHHHHhHcCCCC-------------CcchHHHHHHHHHHHHhcCCc-eecccCCceEEEEEcCC--CCceEEEEe
Q 013076 54 VGWMIGIRRKIHQNPEL-------------GYQEFETSQLIRSELDKMGIK-YKHPVAVTGVVGFIGTG--EPPFVALRA 117 (450)
Q Consensus 54 ~~~~~~~l~~l~~ips~-------------s~~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvva~~~~~--~~~~ill~~ 117 (450)
.+.+.+.+.+|.+|+.+ |..+.++++|+.+||+++|++ ++++. .+||+|++++. +.|+|++.+
T Consensus 180 ~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl~~v~~D~-~gNv~~~~~g~~~~~p~v~~gS 258 (591)
T PRK13799 180 GADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGFDEVEIDA-VGNVVGRYKAADDDAKTLITGS 258 (591)
T ss_pred HHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCCeEeECC-CCCEEEEcCCCCCCCCeEEEec
Confidence 36677888888898621 224568999999999999998 88654 58999999764 368999999
Q ss_pred eccCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCc------cchHHHH---
Q 013076 118 DMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGG------GGAHKVL--- 188 (450)
Q Consensus 118 H~DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~------~Ga~~l~--- 188 (450)
|+||||.+ |+++|+ .|++++|.+++.|++.+.+++++|.|+..++|||. .|++.+.
T Consensus 259 HlDTV~~g------------G~~DG~---~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~~ 323 (591)
T PRK13799 259 HYDTVRNG------------GKYDGR---EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALIGDF 323 (591)
T ss_pred cccccCCC------------CccccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHhCCC
Confidence 99999863 888888 89999999999999999999999999999999962 4666654
Q ss_pred -----H----ccc---------------c-------cccceEEEeccCCC-------CCCceEEeecCcccccceEEEEE
Q 013076 189 -----E----AGV---------------L-------EKVNAIFGLHVDPN-------LPIGEVASRPGPLLAGSGFFEAV 230 (450)
Q Consensus 189 -----~----~~~---------------~-------~~~d~~i~~~~~~~-------~~~g~~~~~~g~~~~G~~~~~i~ 230 (450)
+ +|. . .++++.+.+|++.+ .+.|.+ .+++|..+++|+
T Consensus 324 ~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~igvV-----~g~~G~~~~~It 398 (591)
T PRK13799 324 NMELLDIKDADGISLREAIQHAGHCIDAIPKIARDPADVLGFIEVHIEQGPVLLELDIPLGIV-----TSIAGSARYICE 398 (591)
T ss_pred hHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCcEEEE-----eeeccceEEEEE
Confidence 1 121 0 13446677777765 222222 346799999999
Q ss_pred EEecCCCCCC-CC-CCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecC-CCCCCCCCeEEEEEEEecCChhhHH
Q 013076 231 IGGKGGHAAI-PQ-HSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFT 307 (450)
Q Consensus 231 v~G~~~Hss~-p~-~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~nviP~~a~~~idiR~~~~~~~~ 307 (450)
++|+++|+|. |+ .+.||+..+++++..++++..+. +....+++++.|+++ .+.|+||++|++.+|+|+.++++.+
T Consensus 399 v~GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~--~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e~~e 476 (591)
T PRK13799 399 FIGMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQD--QHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDEIRD 476 (591)
T ss_pred EEEECCCCCCCChhhchhHHHHHHHHHHHHHHHHHhc--CCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHHHHH
Confidence 9999999995 64 58899999999999999875432 223357889999853 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCe
Q 013076 308 QLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPG 387 (450)
Q Consensus 308 ~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~ 387 (450)
.+.++|++.++..+..+++.++++. ....++..+|+++++.+.++.++. |.++. ...+++++|+++|.+..|.
T Consensus 477 ~l~~~i~~~i~~ia~~~g~~~ei~~----~~~~~~~~~d~~lv~~~~~a~~~~-G~~~~--~~~sgag~Da~~~a~~~p~ 549 (591)
T PRK13799 477 AAVADILAEIAAIAARRGIEYKAEL----AMKAAAAPCAPELMKQLEAATDAA-GVPLF--ELASGAGHDAMKIAEIMDQ 549 (591)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEE----EecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCcchHHHHHHHHhhCCE
Confidence 9999999999998888888887766 334556777889999999988875 87652 3567899999999998776
Q ss_pred EEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 388 YFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 388 ~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
.+++.++++ ...+|+|+|+++++++..++++|..++..+.+
T Consensus 550 amif~~~g~-----~g~sHsp~E~v~~edL~~g~~vl~~~l~~l~~ 590 (591)
T PRK13799 550 AMLFTRCGN-----AGISHNPLESMTADDMELSADAFLDFLNNFAE 590 (591)
T ss_pred EEEEEecCC-----CCCCCCccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 655433321 23589999999999999999999999988754
No 64
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.94 E-value=5.9e-26 Score=221.34 Aligned_cols=350 Identities=17% Similarity=0.188 Sum_probs=266.4
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCce-ecc----------cCCceEEEEEcCCC--CceEEEEeeccC
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKY-KHP----------VAVTGVVGFIGTGE--PPFVALRADMDS 121 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~-~~~----------~~~~nvva~~~~~~--~~~ill~~H~Dv 121 (450)
+.+++.+.++++||+.|++|.+++.|+.+|++.+|+.+ ... .+..-+.+.+++.- -|++.|.+|+||
T Consensus 5 ~~l~~~F~~~~kI~~~S~~e~~~~p~~~~~~k~~~~~v~dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~Dt 84 (414)
T COG2195 5 ERLLDRFLELVKIPTQSKHEKAVAPSTVGQAKLLGLLVEDELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHDT 84 (414)
T ss_pred HHHHHHHHHHeeCCCCCCCccccccccHHHHHHcCchhhhhhccccccccccCCCCeeeEEeeccccccccccccccccc
Confidence 77999999999999999999999999999999999998 321 11112566677652 488999999999
Q ss_pred CCCcC----cCCC--------------------c-cccC-----------CCC-ceecccchHHHHHHHHHHHHHHhcc-
Q 013076 122 LPLQE----MVEW--------------------E-YKSK-----------IPG-KMHACGHDGHVTMLLGAAKILQEHR- 163 (450)
Q Consensus 122 Vp~~~----~~~w--------------------~-~~~~-----------~~g-~l~GrG~kg~~a~~l~a~~~l~~~~- 163 (450)
+|... ...| + +.+. -+| .+-|-+.|+|++.++.++..+++..
T Consensus 85 ~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~~~ 164 (414)
T COG2195 85 VPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREKHP 164 (414)
T ss_pred cccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhcCc
Confidence 96311 0112 0 1000 112 2234444899999999999998652
Q ss_pred ccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CC
Q 013076 164 EELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IP 241 (450)
Q Consensus 164 ~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss-~p 241 (450)
.-++++|++.|+++|| ++.|+..+.-... .+++.+.+ + +.+.|.+.... .+...+++++.|+.+|++ .+
T Consensus 165 ~i~h~~i~~g~s~~Ee~g~rg~~~~~~a~f--~a~~ay~i--D-Gg~~g~i~~ea----~~~~~~~~~~~g~~~h~~~a~ 235 (414)
T COG2195 165 EIPHGGIRGGFSPDEEIGGRGAANKDVARF--LADFAYTL--D-GGPVGEIPREA----FNAAAVRATIVGPNVHPGSAK 235 (414)
T ss_pred cccccCeEEEecchHHhhhhhhhhccHHhh--hcceeEec--C-CCccCeeeeec----cchheeeeeeeccCcCccchH
Confidence 3567999999999999 6689887654322 23444443 3 34566654432 367789999999999998 47
Q ss_pred CCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHH
Q 013076 242 QHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQA 321 (450)
Q Consensus 242 ~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~ 321 (450)
....||+..+.++...+..... ...++.+.+..+++...|.|.+++.....+|.......+.....+++.+++..
T Consensus 236 ~~~i~a~~~a~e~~~~~~~~~~-----~e~t~~~~Gv~~~~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~~~~~~~~ 310 (414)
T COG2195 236 GKMINALLLAAEFILELPLEEV-----PELTEGPEGVYHLGDSTNSVEETSLNLAIIRDFDNLLFRARKDSMKDVVEEMA 310 (414)
T ss_pred HHHhhHHHhhhhhhhcCCcccc-----cccccccceEEeccccccchhhhhhhhhhhhhcchhHHHHhHHHHHHHHHHHH
Confidence 7888999999888887654321 13456778888899999999999999999999999989999999999998888
Q ss_pred HhhC--CeEEEEeeccCCCCCCCcc--CChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccC
Q 013076 322 AVQR--CSATVDFLSKEKPFFPPTI--NNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKN 396 (450)
Q Consensus 322 ~~~~--~~~~i~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~ 396 (450)
+.++ ..++++. ...||.|. .++.++..++++++++ +.+| ....+.|++|++.++.. +|+.+++.|| .
T Consensus 311 ~~~g~~~~~~~~~----~~~Yp~~~~~~~~~iv~~a~~a~~~l-~~~p--~v~~i~gGtd~~~is~~g~p~~~i~~Gp-~ 382 (414)
T COG2195 311 ASLGKLAGAELEV----KDSYPGWKIKPDSPLVDLAKKAYKEL-GIKP--KVKPIHGGTDGGVLSFKGLPTPNISTGP-G 382 (414)
T ss_pred HHhhhccceEEEE----eccccCcCCCCCchHHHHHHHHHHHh-CCCc--eEEEeecccchhhhhccCCCCceEeccc-c
Confidence 8777 6666666 45566654 4567999999999999 5556 35679999999999988 8888999996 3
Q ss_pred CCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 397 ETLGKVESIHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 397 ~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
.++|+++|+|+++++.++++++..++..+.
T Consensus 383 ------~n~Hs~~E~v~I~s~ek~~~~l~~l~~~~~ 412 (414)
T COG2195 383 ------ENPHSPDEFVSIESMEKAVQVLVELLKLAA 412 (414)
T ss_pred ------cCCCCccceeehHHHHHHHHHHHHHHHHhh
Confidence 569999999999999999999998877653
No 65
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.89 E-value=1.2e-22 Score=182.26 Aligned_cols=176 Identities=26% Similarity=0.344 Sum_probs=132.8
Q ss_pred EEEeeccCCCCcCcCCCccc----cCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc-ch
Q 013076 114 ALRADMDSLPLQEMVEWEYK----SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGG-GA 184 (450)
Q Consensus 114 ll~~H~DvVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~-Ga 184 (450)
+|++|||||| + ...|.++ .+++|++||||+ |+++++++.|++.|++.+.+++++|.|+|+++|| ++. |+
T Consensus 1 ll~~H~Dtv~-~-~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~ 78 (189)
T PF01546_consen 1 LLYAHMDTVP-G-PEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGA 78 (189)
T ss_dssp EEEEES-BCS-T-GGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHH
T ss_pred CccccccccC-C-cCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchh
Confidence 6899999999 4 6789654 356899999998 8999999999999998888999999999999999 555 99
Q ss_pred HHHHHccc--ccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhh
Q 013076 185 HKVLEAGV--LEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLV 262 (450)
Q Consensus 185 ~~l~~~~~--~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~ 262 (450)
+++++++. ..++|+++..+ ++.. +...
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~e-----~~~~----------~~~~------------------------------------ 107 (189)
T PF01546_consen 79 KHLLEEGAFFGLHPDYVIIGE-----PTGK----------GGVG------------------------------------ 107 (189)
T ss_dssp HHHHHHCEEEEEEESEEEECE-----CETT----------SEEE------------------------------------
T ss_pred hhhhhhccccccccccccccc-----cccc----------cccc------------------------------------
Confidence 99999742 12345444321 1110 1100
Q ss_pred cccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCC
Q 013076 263 SREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPP 342 (450)
Q Consensus 263 ~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 342 (450)
T Consensus 108 -------------------------------------------------------------------------------- 107 (189)
T PF01546_consen 108 -------------------------------------------------------------------------------- 107 (189)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhh--hcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHH
Q 013076 343 TINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQE--VMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYG 420 (450)
Q Consensus 343 ~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~--~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~ 420 (450)
...++++++.+++++++.++... .+...+|++|++++.+ .....++++|+.. ..+|++||+++++++.++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~tD~~~~~~~~~~~~~~i~~G~~~------~~~H~~~E~i~~~~l~~~ 179 (189)
T PF01546_consen 108 SDNDPPLVQALQAAAQEVGGEPP--EPVASGGGTDAGFLAEVKGLGIPAIGFGPGG------SNAHTPDEYIDIEDLVKG 179 (189)
T ss_dssp HCTCHHHHHHHHHHHHHTTSSEE--EEEEESSSSTHHHHHCHHHTTEEEEEEESCE------ESTTSTT-EEEHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhhccc--cccceeccccchhhhhhhccccceeeeCCCC------CCCCCCCcEecHHHHHHH
Confidence 23467799999999999965233 3567899999999995 3333345567543 579999999999999999
Q ss_pred HHHHHHHHHH
Q 013076 421 AALHASLALR 430 (450)
Q Consensus 421 ~~~~~~~~~~ 430 (450)
+++|++++.+
T Consensus 180 ~~~~~~~l~n 189 (189)
T PF01546_consen 180 AKIYAALLEN 189 (189)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhC
Confidence 9999998763
No 66
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.80 E-value=1.6e-18 Score=164.10 Aligned_cols=259 Identities=14% Similarity=0.192 Sum_probs=176.6
Q ss_pred HHHHHHHHHhHcCCCCCcc--hHHHHHHHHHHHHhcCCceec----------cc--CCceEEEEEcCC-CCceEEEEeec
Q 013076 55 GWMIGIRRKIHQNPELGYQ--EFETSQLIRSELDKMGIKYKH----------PV--AVTGVVGFIGTG-EPPFVALRADM 119 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~~~~----------~~--~~~nvva~~~~~-~~~~ill~~H~ 119 (450)
+++.++..+|++.||++|. |...+++|...|.++-+--+. .+ ++.||+|.++++ ++.+|++.||+
T Consensus 8 e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~~k~tvvl~gH~ 87 (553)
T COG4187 8 ERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGTSKRTVVLHGHF 87 (553)
T ss_pred HHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCCCCceEEEeecc
Confidence 7789999999999999875 677899999999987542111 12 678999999774 46899999999
Q ss_pred cCCCCcCcCCC---cccc----------------------CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEE
Q 013076 120 DSLPLQEMVEW---EYKS----------------------KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVV 171 (450)
Q Consensus 120 DvVp~~~~~~w---~~~~----------------------~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~ 171 (450)
|||.+.+-... .|++ ..+++|+|||+ |+|+|+.|++++.+.+. ....|||.
T Consensus 88 DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~-~~~~GNlL 166 (553)
T COG4187 88 DTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAAR-TDRQGNLL 166 (553)
T ss_pred ceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhC-CCCCCcEE
Confidence 99987653221 2221 23689999998 99999999999988876 47899999
Q ss_pred EEEecCCC-CccchHHHHHc--cccc--ccceEEEeccCCCCCC--c---eEEeecCcccccceEEEEEEEecCCCCCCC
Q 013076 172 LVFQPAEE-GGGGAHKVLEA--GVLE--KVNAIFGLHVDPNLPI--G---EVASRPGPLLAGSGFFEAVIGGKGGHAAIP 241 (450)
Q Consensus 172 ~~~~~dEE-g~~Ga~~l~~~--~~~~--~~d~~i~~~~~~~~~~--g---~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p 241 (450)
|+.++||| .+.|++..+.. +..+ +.++..+++.+...+. | ... ..| ..|.+-.-.-|.|+..|.|.|
T Consensus 167 f~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryv-YtG--tiGKLLp~f~vvG~etHvG~~ 243 (553)
T COG4187 167 FMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYV-YTG--TIGKLLPFFFVVGCETHVGYP 243 (553)
T ss_pred EEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEE-Eec--cchhhcceeEEEeeccccCCc
Confidence 99999999 77888876652 1111 3344444433332221 2 222 223 246677788899999999999
Q ss_pred CCCCcHHHHHHHHHHHHhh---hhcccCCCCCCceEEEEEEecCCCCCC-CCCeEEEEEEEecCChhhHHHHHHHHHHHH
Q 013076 242 QHSIDPILAASNVIVSLQH---LVSREADPLDSQVVTVAKFQGGGAFNV-IPDSVLIGGTFRAFSKESFTQLKQRIEEVI 317 (450)
Q Consensus 242 ~~g~nAi~~~~~~l~~l~~---~~~~~~~~~~~~t~~i~~i~gG~~~nv-iP~~a~~~idiR~~~~~~~~~~~~~i~~~~ 317 (450)
..|+||-..++++..+|+- +..+.......+..+.-.-.=-++.|| .|.++.+.|++=+. ..+.+++.+++++..
T Consensus 244 f~Gvnan~maSei~~~le~N~~l~dr~~Ge~t~PPs~L~qkDlKe~Y~VqTp~~a~~~fN~l~h-~~ta~~~~d~l~~~a 322 (553)
T COG4187 244 FEGVNANFMASEITRRLELNADLADRVDGEITPPPSCLEQKDLKESYNVQTPERAWLYFNWLYH-SRTAKELFDRLKEEA 322 (553)
T ss_pred ccCCCHHHHHHHHHHHhhcChhhhhhhCCeeCCCcHhhhhhhhhhhccccCcchhhhhheehhh-cCCHHHHHHHHHHHH
Confidence 9999999999999999863 222222111111111111111235566 68999999988543 445555555555444
Q ss_pred H
Q 013076 318 I 318 (450)
Q Consensus 318 ~ 318 (450)
+
T Consensus 323 ~ 323 (553)
T COG4187 323 E 323 (553)
T ss_pred H
Confidence 3
No 67
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.75 E-value=9.4e-18 Score=136.94 Aligned_cols=104 Identities=27% Similarity=0.345 Sum_probs=94.7
Q ss_pred ccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccC-----CCCCCceEEEEEEecCCCCCCCCCeEEE
Q 013076 220 LLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREA-----DPLDSQVVTVAKFQGGGAFNVIPDSVLI 294 (450)
Q Consensus 220 ~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~-----~~~~~~t~~i~~i~gG~~~nviP~~a~~ 294 (450)
+++|..+++|+++|+++|+|.|+.|+||+..+++++.+|+++..+.. .....++++++.|+||...|+||++|++
T Consensus 2 g~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~n~ip~~a~~ 81 (111)
T PF07687_consen 2 GHRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEGGTAPNVIPDEATL 81 (111)
T ss_dssp EEEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEEESSTTEESSEEEE
T ss_pred cCCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeecccCCcCCEECCEEEE
Confidence 35799999999999999999999999999999999999998864432 4567899999999999999999999999
Q ss_pred EEEEecCChhhHHHHHHHHHHHHHHHHHh
Q 013076 295 GGTFRAFSKESFTQLKQRIEEVIIGQAAV 323 (450)
Q Consensus 295 ~idiR~~~~~~~~~~~~~i~~~~~~~~~~ 323 (450)
++++|+.|.++.+++++.|++.+++.+.+
T Consensus 82 ~~~~R~~p~~~~~~i~~~i~~~~~~~~~~ 110 (111)
T PF07687_consen 82 TVDIRYPPGEDLEEIKAEIEAAVEKIAKK 110 (111)
T ss_dssp EEEEEESTCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcchHHHHHHHHHHHHHHhhhC
Confidence 99999999999999999999999987643
No 68
>PRK09961 exoaminopeptidase; Provisional
Probab=99.73 E-value=6.1e-16 Score=150.48 Aligned_cols=249 Identities=15% Similarity=0.108 Sum_probs=169.7
Q ss_pred HHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCCCC-----cC------
Q 013076 58 IGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPL-----QE------ 126 (450)
Q Consensus 58 ~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~-----~~------ 126 (450)
+++|++|+++||+|+.|.++++++.++|+++|++++.+ ..+|+++.+++..+|+|+|.+|||+|+. .+
T Consensus 3 ~~~L~~L~~~~s~sG~E~~v~~~i~~~l~~~~~~v~~D-~~Gnvi~~~~g~~~~~v~l~aHmDevg~~V~~I~~~G~l~~ 81 (344)
T PRK09961 3 LSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFD-GLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDV 81 (344)
T ss_pred HHHHHHHHhCCCCCCChHHHHHHHHHHHHhhCCEEEEC-CCCCEEEEEcCCCCCEEEEEeccceeceEEEEECCCceEEE
Confidence 36799999999999999999999999999999998754 6889999886544589999999999942 00
Q ss_pred --cCCCc-c------------------------------c---------c-----------------------CCCCcee
Q 013076 127 --MVEWE-Y------------------------------K---------S-----------------------KIPGKMH 141 (450)
Q Consensus 127 --~~~w~-~------------------------------~---------~-----------------------~~~g~l~ 141 (450)
-.+|. . . + ..++++.
T Consensus 82 ~~vGG~~~~~~~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~ 161 (344)
T PRK09961 82 LPVGNVRMAARQLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVM 161 (344)
T ss_pred EeCCCccccccCCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEE
Confidence 01121 0 0 0 0113444
Q ss_pred cccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEeccCCCCCCceEEeecC
Q 013076 142 ACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPG 218 (450)
Q Consensus 142 GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g 218 (450)
|+.- +.++++++.+++.+++. +++.+|.++|++.|| |..|++..... -++|.+|+++..+
T Consensus 162 gkalDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~rGa~~aa~~---i~pd~~I~vDv~~------------ 224 (344)
T PRK09961 162 GKAFDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLRGGQTATRA---VSPDVAIVLDTAC------------ 224 (344)
T ss_pred EeechhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccchHHHHHHHhc---cCCCEEEEEeccC------------
Confidence 5544 59999999999998754 478999999999999 78898876542 2467777653211
Q ss_pred cccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEE
Q 013076 219 PLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTF 298 (450)
Q Consensus 219 ~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idi 298 (450)
|.-.|... ..+...+.+
T Consensus 225 ------------------~~d~~~~~----------------------------~~~~~~lg~----------------- 241 (344)
T PRK09961 225 ------------------WAKNFDYG----------------------------AANHRQIGN----------------- 241 (344)
T ss_pred ------------------CCCCCCCC----------------------------CCcccccCC-----------------
Confidence 00011000 000001111
Q ss_pred ecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchH
Q 013076 299 RAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDF 378 (450)
Q Consensus 299 R~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~ 378 (450)
|.- +.. ... ....|+.+.+.+++++++. +.+.+. ....+|+||+
T Consensus 242 --------------------------Gp~--i~~----~D~--~~i~~~~l~~~l~~~A~~~-~Ip~Q~-~~~~ggGTDa 285 (344)
T PRK09961 242 --------------------------GPM--LVL----SDK--SLIAPPKLTAWIETVAAEI-GIPLQA-DMFSNGGTDG 285 (344)
T ss_pred --------------------------Cce--EEE----ccC--CcCCCHHHHHHHHHHHHHc-CCCcEE-EecCCCcchH
Confidence 111 211 111 1234788999999999988 766532 1234578999
Q ss_pred HHHhh--h-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHH
Q 013076 379 SFYQE--V-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRY 431 (450)
Q Consensus 379 ~~~~~--~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l 431 (450)
+.+.. . +|++.+++|. ..+|+++|+++++++..+++++..++..+
T Consensus 286 ~~~~~~~~Giptv~ig~p~--------ry~Hs~~E~v~~~D~~~~~~Ll~~~i~~l 333 (344)
T PRK09961 286 GAVHLTGTGVPTVVMGPAT--------RHGHCAASIADCRDILQMIQLLSALIQRL 333 (344)
T ss_pred HHHHHhCCCCCEEEechhh--------hcccChhheEEHHHHHHHHHHHHHHHHHc
Confidence 97765 3 8988866653 25999999999999999999999998554
No 69
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.73 E-value=8e-16 Score=149.18 Aligned_cols=129 Identities=20% Similarity=0.242 Sum_probs=103.8
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC-CCceEEEEeeccCCCC---------
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG-EPPFVALRADMDSLPL--------- 124 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~-~~~~ill~~H~DvVp~--------- 124 (450)
+.+++++++|+++||+|+.|.++++++.++|+++|++++.+ ..+|++|.+.+. .+|+|+|.+|||+|..
T Consensus 3 ~~~~~lLk~Lv~~~s~SG~E~~V~~~l~~~l~~~g~ev~~D-~~Gnlia~~~g~~~~~~v~l~aHmDevG~~V~~I~~~G 81 (343)
T TIGR03106 3 DYLTETLLALLAIPSPTGFTDAVVRYVAERLEDLGIEYELT-RRGAIRATLPGREATPARAVVTHLDTLGAMVRELKDNG 81 (343)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEC-CCeEEEEEECCCCCCCeEEEEEeeccccceeeEECCCC
Confidence 56899999999999999999999999999999999998864 588999988653 3589999999999933
Q ss_pred -------cCc----------------C-------------------------CCc---------ccc-------------
Q 013076 125 -------QEM----------------V-------------------------EWE---------YKS------------- 134 (450)
Q Consensus 125 -------~~~----------------~-------------------------~w~---------~~~------------- 134 (450)
|.. . .|. .++
T Consensus 82 ~l~~~~iGG~~~~~l~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~lGV~~Gd 161 (343)
T TIGR03106 82 RLELVPIGHWSARFAEGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVRLGISVGD 161 (343)
T ss_pred eEEEEecCCCcccceeCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHHcCCCCCC
Confidence 110 0 010 000
Q ss_pred ----------CCCCceecccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCccch
Q 013076 135 ----------KIPGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGA 184 (450)
Q Consensus 135 ----------~~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~~Ga 184 (450)
..+|++|||+. |+++++++.+++.|++.+.+++.+|.++|+++||.+.|+
T Consensus 162 ~v~~~~~~~~~~~~~i~gr~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG~ga 223 (343)
T TIGR03106 162 FVAFDPQPEFLANGFIVSRHLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVGSGA 223 (343)
T ss_pred EEEECCccEEecCCEEEEEecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCccc
Confidence 02478999986 899999999999999877678899999999999943563
No 70
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.69 E-value=6.3e-15 Score=142.84 Aligned_cols=244 Identities=16% Similarity=0.199 Sum_probs=169.4
Q ss_pred HHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC--CCceEEEEeeccCCCC-----cC-----
Q 013076 59 GIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG--EPPFVALRADMDSLPL-----QE----- 126 (450)
Q Consensus 59 ~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~--~~~~ill~~H~DvVp~-----~~----- 126 (450)
++|++|+++|++||.|.+++++++++|++++.+++++ ..+|++|.++++ .+|+|+|.+|||+|+. .+
T Consensus 2 ~~L~~L~~~~gpSG~E~~v~~~i~~~l~~~~~~v~~D-~~GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I~~~G~l~ 80 (350)
T TIGR03107 2 NKIKEVTELQGTSGFEHPIRDYLRQDITPLVDQVETD-GLGGIFGIKESQVENAPRVMVAAHMDEVGFMVSQIKPDGTFR 80 (350)
T ss_pred hHHHHHHhCCCCCCCcHHHHHHHHHHHHhhCCEEEEC-CCCCEEEEecCCCCCCCEEEEEecccEeCEEEEEECCCceEE
Confidence 4689999999999999999999999999999988755 578999988653 3589999999999921 00
Q ss_pred ---cCCCc----------c--------------------cc---C-----------------------------------
Q 013076 127 ---MVEWE----------Y--------------------KS---K----------------------------------- 135 (450)
Q Consensus 127 ---~~~w~----------~--------------------~~---~----------------------------------- 135 (450)
-.+|. + +. +
T Consensus 81 ~~~vGG~~~~~l~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDiGa~skee~~~~GI~vGd~v~~~ 160 (350)
T TIGR03107 81 VVELGGWNPLVVSSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDGGFTNKDEAWSFGVRPGDVIVPQ 160 (350)
T ss_pred EEeCCCccccccCCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 01121 0 00 0
Q ss_pred -------CCCceecccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEeccC
Q 013076 136 -------IPGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVD 205 (450)
Q Consensus 136 -------~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~ 205 (450)
.++++.||.- +.++++++.+++.+++. +++.++.++|++.|| |..||+..... -++|.+|+++..
T Consensus 161 ~~~~~~~~~~~i~~kalDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~---i~pD~aI~vDv~ 235 (350)
T TIGR03107 161 TETILTANGKNVISKAWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTK---FNPDIFFAVDCS 235 (350)
T ss_pred CCeEEEcCCCEEEEeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhh---CCCCEEEEEecC
Confidence 0023444443 59999999999999864 577899999999999 77999876442 256777775432
Q ss_pred CCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCC
Q 013076 206 PNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAF 285 (450)
Q Consensus 206 ~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~ 285 (450)
+. +. .|... . ..+..
T Consensus 236 ~~---~d---------------------------~~~~~---------------------------~----~~lg~---- 250 (350)
T TIGR03107 236 PA---GD---------------------------IYGDQ---------------------------G----GKLGE---- 250 (350)
T ss_pred Cc---CC---------------------------CCCCC---------------------------c----cccCC----
Confidence 11 00 01000 0 00000
Q ss_pred CCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCcc
Q 013076 286 NVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQK 365 (450)
Q Consensus 286 nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~ 365 (450)
|.- +.. ... ....++.+.+.+.+++++. +.+.
T Consensus 251 ---------------------------------------Gp~--i~~----~D~--~~i~~~~l~~~l~~~A~~~-~I~~ 282 (350)
T TIGR03107 251 ---------------------------------------GTL--LRF----FDP--GHIMLPRMKDFLLTTAEEA-GIKY 282 (350)
T ss_pred ---------------------------------------Cce--EEE----ecC--CCCCCHHHHHHHHHHHHHc-CCCc
Confidence 111 111 111 1123677889999998887 8876
Q ss_pred ccccCCCcccchHHH--Hhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHH
Q 013076 366 VKVMAPVMGSEDFSF--YQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRY 431 (450)
Q Consensus 366 ~~~~~~~~g~tD~~~--~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l 431 (450)
+ ....+|+||++. +... +|++.+++|.. .+|++.|.++++++..+++++..++.++
T Consensus 283 Q--~~~~~gGtDa~~~~~~~~Gvpt~~i~ip~R--------y~Hs~~e~i~~~D~~~~~~Ll~~~i~~l 341 (350)
T TIGR03107 283 Q--YYVAKGGTDAGAAHLKNSGVPSTTIGVCAR--------YIHSHQTLYSIDDFLAAQAFLQAIVKKL 341 (350)
T ss_pred E--EecCCCCchHHHHHHhCCCCcEEEEccCcc--------cccChhheeeHHHHHHHHHHHHHHHHhc
Confidence 4 345568999994 4444 99998887764 4999999999999999999999998775
No 71
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.68 E-value=8.9e-15 Score=140.01 Aligned_cols=250 Identities=21% Similarity=0.230 Sum_probs=173.9
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCC-ceEEEEeeccCC-----------
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEP-PFVALRADMDSL----------- 122 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~-~~ill~~H~DvV----------- 122 (450)
+.+.++|++|+.+|++||.|.++.+|++++|++++.+++++ ..+|+++++++.++ |.|++.+|||.|
T Consensus 2 ~~~~~~LkeL~~~~gpsG~E~eVr~~~~~el~~~~~ev~~D-~lGnlia~~~g~~g~~~imi~AHmDEiG~mV~~I~~~G 80 (355)
T COG1363 2 EELLELLKELLEAPGPSGYEEEVRDVLKEELEPLGDEVEVD-RLGNLIAKKGGKNGPPKVMIAAHMDEIGFMVKEIEDDG 80 (355)
T ss_pred hHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHhCCceEEc-CCCcEEEEecCCCCCccEEEEeecceeeeeEEEECCCc
Confidence 56789999999999999999999999999999999998755 57899999987434 569999999999
Q ss_pred -----CCcCcCCCccc----------cC-------------------C--------------------------------
Q 013076 123 -----PLQEMVEWEYK----------SK-------------------I-------------------------------- 136 (450)
Q Consensus 123 -----p~~~~~~w~~~----------~~-------------------~-------------------------------- 136 (450)
|+| +|... .. .
T Consensus 81 ~Lr~~~IG---G~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI~vG 157 (355)
T COG1363 81 FLRFVPIG---GWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGIRVG 157 (355)
T ss_pred eEEEEEcC---CcChhhccCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCCCCC
Confidence 222 23100 00 0
Q ss_pred -------------CCceecccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEE
Q 013076 137 -------------PGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIF 200 (450)
Q Consensus 137 -------------~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i 200 (450)
++++-+|-- +.+++++|.+++.| + +.+++.++.|+|++.|| |..|++....+ -++|++|
T Consensus 158 d~v~~~~~~~~l~~~~i~skalDdR~gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVGlrGA~~~a~~---i~pd~ai 232 (355)
T COG1363 158 DFVVFDPRFRELANGRVVSKALDDRAGVAALLELLKEL-K-GIELPADVYFVASVQEEVGLRGAKTSAFR---IKPDIAI 232 (355)
T ss_pred CEEEEcCceEEecCCcEEeeeccchHhHHHHHHHHHHh-c-cCCCCceEEEEEecchhhccchhhccccc---cCCCEEE
Confidence 022223322 69999999999999 4 66899999999999999 77888866442 2567777
Q ss_pred EeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEe
Q 013076 201 GLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQ 280 (450)
Q Consensus 201 ~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~ 280 (450)
.++..+ .+.. + |.- .+ .+.+.
T Consensus 233 avd~~~---~~d~---~-----~~~---------~~---------------------------------------~~~lg 253 (355)
T COG1363 233 AVDVTP---AGDT---P-----GVP---------KG---------------------------------------DVKLG 253 (355)
T ss_pred EEeccc---ccCC---C-----CCc---------cc---------------------------------------ccccC
Confidence 654321 1110 0 100 00 00000
Q ss_pred cCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhh
Q 013076 281 GGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDM 360 (450)
Q Consensus 281 gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 360 (450)
.|..+.+.. ... ..++.+.+.+.+++++.
T Consensus 254 -------------------------------------------~Gp~i~~~D-----~~~---~~~~~l~~~L~~~A~~~ 282 (355)
T COG1363 254 -------------------------------------------KGPVIRVKD-----ASG---IYHPKLRKFLLELAEKN 282 (355)
T ss_pred -------------------------------------------CCCEEEEEc-----CCC---CCCHHHHHHHHHHHHHc
Confidence 011111111 111 12667888888888887
Q ss_pred cCCccccccCCCcccchHHHHhhh---cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 361 LDTQKVKVMAPVMGSEDFSFYQEV---MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 361 ~g~~~~~~~~~~~g~tD~~~~~~~---~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
+.+.+.. ...+|+||++.+... +|+..++++.. ..|+|.|.++++++..+.+++..++..+..
T Consensus 283 -~Ip~Q~~-v~~~ggTDA~a~~~~g~gvpta~Igip~r--------y~Hs~~e~~~~~D~~~~~~Ll~~~i~~~~~ 348 (355)
T COG1363 283 -NIPYQVD-VSPGGGTDAGAAHLTGGGVPTALIGIPTR--------YIHSPVEVAHLDDLEATVKLLVAYLESLDR 348 (355)
T ss_pred -CCCeEEE-ecCCCCccHHHHHHcCCCCceEEEecccc--------cccCcceeecHHHHHHHHHHHHHHHHhcch
Confidence 7776532 344489999988765 89988777754 499999999999999999999998887653
No 72
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.67 E-value=3.9e-15 Score=142.14 Aligned_cols=129 Identities=17% Similarity=0.180 Sum_probs=100.1
Q ss_pred HHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecc-----------c--------CCceEEEEEcCCCCceEEEEe
Q 013076 57 MIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP-----------V--------AVTGVVGFIGTGEPPFVALRA 117 (450)
Q Consensus 57 ~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~-----------~--------~~~nvva~~~~~~~~~ill~~ 117 (450)
+..+...+-..++-|..|.++++||+++|+++|++++.. . ...||+|.+++...+.|++.+
T Consensus 37 ~~~ia~~~~gR~~gS~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~~~~Ill~A 116 (346)
T PRK10199 37 ARHIATFFPGRMTGSPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMA 116 (346)
T ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCCCCeEEEEE
Confidence 333444455566677889999999999999999987531 1 135799999775458899999
Q ss_pred eccCCCCcCcCCCccccCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHc
Q 013076 118 DMDSLPLQEMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEA 190 (450)
Q Consensus 118 H~DvVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~ 190 (450)
|+|||+.....+|++.. +.++++|+ |+|++++|.++++|++. +++.+|.|+++++|| |..|+++++++
T Consensus 117 H~DTV~p~~~~~~~~~~---~g~~~~GA~DnasGvA~lLe~ar~l~~~--~~~~~I~fv~~~~EE~Gl~GS~~~~~~ 188 (346)
T PRK10199 117 HLDTYAPQSDADVDANL---GGLTLQGMDDNAAGLGVMLELAERLKNV--PTEYGIRFVATSGEEEGKLGAENLLKR 188 (346)
T ss_pred EcCcCCCCCCCccccCC---CCcccCCccccHHHHHHHHHHHHHHhhC--CCCCcEEEEEECCcccCcHHHHHHHHh
Confidence 99999644334454432 22788998 79999999999999865 467899999999999 88999999986
No 73
>PRK09864 putative peptidase; Provisional
Probab=99.64 E-value=6.7e-14 Score=135.38 Aligned_cols=247 Identities=16% Similarity=0.137 Sum_probs=168.9
Q ss_pred HHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCCCC-----cC------
Q 013076 58 IGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPL-----QE------ 126 (450)
Q Consensus 58 ~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~-----~~------ 126 (450)
+++|++|+++|++||.|.++++++.++|+.++.+++.+ ..+|+++..+ ..+++|+|.+|||.|+. .+
T Consensus 3 ~~~L~~L~~~~g~SG~E~~v~~~l~~~l~~~~dev~~D-~~GNli~~~g-~~~~kvml~AHmDevG~mV~~I~~~G~l~~ 80 (356)
T PRK09864 3 IELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFD-GLGSFVARKG-NKGPKVAVVGHMDEVGFMVTHIDESGFLRF 80 (356)
T ss_pred HHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCEEEEC-CCCCEEEEeC-CCCcEEEEEecccccCEEEEEECCCCeEEE
Confidence 45799999999999999999999999999999998754 5789999873 33479999999999931 00
Q ss_pred --cCCCccc----------cC-----------------------------------------------------------
Q 013076 127 --MVEWEYK----------SK----------------------------------------------------------- 135 (450)
Q Consensus 127 --~~~w~~~----------~~----------------------------------------------------------- 135 (450)
-.+|... ..
T Consensus 81 ~~lGG~~~~~l~~q~V~i~t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD~v~~~~~ 160 (356)
T PRK09864 81 TTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGDFISPEAN 160 (356)
T ss_pred EeCCCcCccccCCCEEEEEeCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCCEEEECCC
Confidence 0122100 00
Q ss_pred ----CCCceecccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEeccCCCC
Q 013076 136 ----IPGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNL 208 (450)
Q Consensus 136 ----~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~ 208 (450)
.++++.|+.- +.++++++.+++.+++ ++.++.++|++.|| |.+||+..... -++|.+|+++..+.
T Consensus 161 ~~~l~~~~i~~kalDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~---i~PDiaIavDvt~~- 232 (356)
T PRK09864 161 FACWGEDKVVGKALDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEH---IKPDVVIVLDTAVA- 232 (356)
T ss_pred cEEEcCCEEEEEeCccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhc---CCCCEEEEEecccC-
Confidence 0033444443 5999999999998864 77999999999999 77999876543 24677777643221
Q ss_pred CCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCC
Q 013076 209 PIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVI 288 (450)
Q Consensus 209 ~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nvi 288 (450)
+. .|... .....+.+.+|.
T Consensus 233 --~d---------------------------~p~~~---------------------------~~~~~~~lG~Gp----- 251 (356)
T PRK09864 233 --GD---------------------------VPGID---------------------------NIKYPLKLGQGP----- 251 (356)
T ss_pred --CC---------------------------CCCCc---------------------------ccccccccCCCC-----
Confidence 00 01000 000011111111
Q ss_pred CCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccc
Q 013076 289 PDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKV 368 (450)
Q Consensus 289 P~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~ 368 (450)
- +.. ... ....++.+.+.+.+++++. +.+.+..
T Consensus 252 --------------------------------------~--i~~----~D~--~~i~~~~l~~~l~~~A~~~-~Ip~Q~~ 284 (356)
T PRK09864 252 --------------------------------------G--LML----FDK--RYFPNQKLVAALKSCAAHN-DLPLQFS 284 (356)
T ss_pred --------------------------------------e--EEE----ccC--CccCCHHHHHHHHHHHHHc-CCCceEE
Confidence 1 111 001 1124677888998888887 8876422
Q ss_pred cCCCcccchHHHHhhh---cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHH
Q 013076 369 MAPVMGSEDFSFYQEV---MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRY 431 (450)
Q Consensus 369 ~~~~~g~tD~~~~~~~---~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l 431 (450)
....|+||++.+... +|++.++++.+ .+|+|.|-++++++..+++++..++.++
T Consensus 285 -~~~~ggTDa~~i~~~~~Gvpt~~isiP~R--------Y~Hs~~e~~~~~D~e~~~~Ll~~~~~~l 341 (356)
T PRK09864 285 -TMKTGATDGGRYNVMGGGRPVVALCLPTR--------YLHANSGMISKADYDALLTLIRDFLTTL 341 (356)
T ss_pred -EcCCCCchHHHHHHhCCCCcEEEEeeccC--------cCCCcceEeEHHHHHHHHHHHHHHHHhc
Confidence 344579999988653 89988888765 4999999999999999999999998775
No 74
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=98.68 E-value=3.1e-07 Score=87.37 Aligned_cols=68 Identities=18% Similarity=0.170 Sum_probs=51.5
Q ss_pred ChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh---cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHH
Q 013076 346 NNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV---MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAA 422 (450)
Q Consensus 346 d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~---~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~ 422 (450)
++.+.+.+.+++++. +.+.+.. ....++||++.+... +|++.++++.. ..|+|.|.++++++...++
T Consensus 222 ~~~l~~~l~~~A~~~-~Ip~Q~~-~~~~ggTDa~~~~~~~~Gi~t~~i~iP~r--------y~Hs~~e~~~~~Di~~~~~ 291 (292)
T PF05343_consen 222 NPKLVDKLREIAEEN-GIPYQRE-VFSGGGTDAGAIQLSGGGIPTAVISIPCR--------YMHSPVEVIDLDDIEATID 291 (292)
T ss_dssp HHHHHHHHHHHHHHT-T--EEEE-EESSSSSTHHHHHTSTTSSEEEEEEEEEB--------STTSTTEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCCeEEE-ecCCcccHHHHHHHcCCCCCEEEEecccc--------cCCCcceEEEHHHHHHHhh
Confidence 566778888887777 7765432 456789999998754 78888888765 4999999999999988776
Q ss_pred H
Q 013076 423 L 423 (450)
Q Consensus 423 ~ 423 (450)
+
T Consensus 292 L 292 (292)
T PF05343_consen 292 L 292 (292)
T ss_dssp H
T ss_pred C
Confidence 4
No 75
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.07 E-value=2.4e-05 Score=82.20 Aligned_cols=133 Identities=22% Similarity=0.284 Sum_probs=93.2
Q ss_pred HHHHHHHHHhHcC-CCCCc---chHHHHHHHHHHHHhcCCc-------eecc-----------------cCCceEEEEEc
Q 013076 55 GWMIGIRRKIHQN-PELGY---QEFETSQLIRSELDKMGIK-------YKHP-----------------VAVTGVVGFIG 106 (450)
Q Consensus 55 ~~~~~~l~~l~~i-ps~s~---~e~~~~~~l~~~l~~~G~~-------~~~~-----------------~~~~nvva~~~ 106 (450)
+++.+.+.++.++ |.+.+ +|..+.+|+.+++.+..=. .+.+ -+-.||+.++.
T Consensus 57 ~rA~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVki~ 136 (834)
T KOG2194|consen 57 ARALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVKIS 136 (834)
T ss_pred HHHHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEecC
Confidence 4467777777777 65544 3456788888877765211 1111 12458999986
Q ss_pred CCC---CceEEEEeeccCCCCcCcCCCccccCCCCceecccc-hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc
Q 013076 107 TGE---PPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGH-DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG 181 (450)
Q Consensus 107 ~~~---~~~ill~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~-kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~ 181 (450)
++. +-.|++++|+|+||.+. |-|. -.++|++|.+++.+.+....+..+|+|+|...|| +.
T Consensus 137 ~k~~~~~~~lLlnaHfDSvpt~~---------------gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L 201 (834)
T KOG2194|consen 137 PKNGNDKNALLLNAHFDSVPTGP---------------GATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGL 201 (834)
T ss_pred CCCCCccceeeeeccccccCCCC---------------CCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccchh
Confidence 542 24799999999999653 3333 2578999999999988877789999999999999 66
Q ss_pred cchHHHHHcc-cccccceEEEe
Q 013076 182 GGAHKVLEAG-VLEKVNAIFGL 202 (450)
Q Consensus 182 ~Ga~~l~~~~-~~~~~d~~i~~ 202 (450)
.|+..++.++ +.+.+.+.+.+
T Consensus 202 ~gsH~FItQH~w~~~~ka~INL 223 (834)
T KOG2194|consen 202 LGSHAFITQHPWSKNIKAVINL 223 (834)
T ss_pred hhcccceecChhhhhhheEEec
Confidence 7888887743 33455666654
No 76
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.07 E-value=1.1e-05 Score=71.33 Aligned_cols=80 Identities=29% Similarity=0.432 Sum_probs=58.7
Q ss_pred eEEEEeeccCCCCcCcCCCccccCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHH
Q 013076 112 FVALRADMDSLPLQEMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKV 187 (450)
Q Consensus 112 ~ill~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l 187 (450)
.|++.+|+|+++ +... + -++.|+ -.|++++|..++.|++.+.+++++|+|+|...|| |..|++++
T Consensus 2 ~ivi~aH~Ds~~-~~~~---------~-~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~ 70 (179)
T PF04389_consen 2 YIVIGAHYDSVG-GDAD---------G-SWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAF 70 (179)
T ss_dssp EEEEEEE--BES-CCC----------T-CSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHH
T ss_pred EEEEEeecCCCC-CcCC---------C-cccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHH
Confidence 589999999998 2211 2 356776 3899999999999999777888999999999999 88999999
Q ss_pred HHcc--cccccceEEEe
Q 013076 188 LEAG--VLEKVNAIFGL 202 (450)
Q Consensus 188 ~~~~--~~~~~d~~i~~ 202 (450)
+++. ...++.++|.+
T Consensus 71 ~~~~~~~~~~~~~~inl 87 (179)
T PF04389_consen 71 VEHDHEELDNIAAVINL 87 (179)
T ss_dssp HHHHHCHHHHEEEEEEE
T ss_pred HHhhhcccccceeEEec
Confidence 9731 22244455554
No 77
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=96.41 E-value=0.049 Score=53.05 Aligned_cols=114 Identities=19% Similarity=0.259 Sum_probs=74.8
Q ss_pred HHHHHHHHhcCCceecc---------cCCceEEEEEcCC--------CCceEEEEeeccCCCCcCcCCCccccCCCCcee
Q 013076 79 QLIRSELDKMGIKYKHP---------VAVTGVVGFIGTG--------EPPFVALRADMDSLPLQEMVEWEYKSKIPGKMH 141 (450)
Q Consensus 79 ~~l~~~l~~~G~~~~~~---------~~~~nvva~~~~~--------~~~~ill~~H~DvVp~~~~~~w~~~~~~~g~l~ 141 (450)
+.+..-+...|++.... ..-+|+.+++.++ .-|+|++.+||||..+.+ +.--
T Consensus 165 ~~ll~Tasangy~iv~sg~sp~a~~s~ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap-----------~lsv 233 (555)
T KOG2526|consen 165 QHLLQTASANGYSIVSSGQSPEAPPSYKILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAP-----------GLSV 233 (555)
T ss_pred HHHHhhhccCcEEEEecCCCcccCCCCccceEEeecccccccccccccCCeEEEEEeccccccCC-----------CCCC
Confidence 34555555667776531 1246899998622 139999999999997643 1112
Q ss_pred cccc-hHHHHHHHHHHHHHHhcc----ccCCceEEEEEecCCC-CccchHHHHHc---ccccccceEEEec
Q 013076 142 ACGH-DGHVTMLLGAAKILQEHR----EELKGTVVLVFQPAEE-GGGGAHKVLEA---GVLEKVNAIFGLH 203 (450)
Q Consensus 142 GrG~-kg~~a~~l~a~~~l~~~~----~~~~~~i~~~~~~dEE-g~~Ga~~l~~~---~~~~~~d~~i~~~ 203 (450)
|-++ .+|+.++|..++.+.+.- -..+.|+.|+.+.+-- .-.|.+.+++- .+.+.+|++++++
T Consensus 234 gADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLd 304 (555)
T KOG2526|consen 234 GADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICLD 304 (555)
T ss_pred CCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEEEccCccccccchhhhhhcchHHHHhcccEEEEhh
Confidence 3333 367778888888876532 2357899999998766 55788888872 2223678888764
No 78
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=96.14 E-value=0.21 Score=46.24 Aligned_cols=124 Identities=16% Similarity=0.167 Sum_probs=81.7
Q ss_pred HHHHHHHHHhHcCCCCCc--chHHHHHHHHHHHHhcCCceeccc----------CCceEEEEEcCCCCceEEEEeeccCC
Q 013076 55 GWMIGIRRKIHQNPELGY--QEFETSQLIRSELDKMGIKYKHPV----------AVTGVVGFIGTGEPPFVALRADMDSL 122 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~~~----------~~~nvva~~~~~~~~~ill~~H~DvV 122 (450)
..+.+.++-+ -+|.+-| .-+++.+||.+.|+.+|+.++.+. .-.|+++++.......+++.+|+|+-
T Consensus 51 ~~~~~~L~p~-lv~Rvpgs~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~A~r~lVlachydsk 129 (338)
T KOG3946|consen 51 NRLWENLLPI-LVPRVPGSPGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPNASRYLVLACHYDSK 129 (338)
T ss_pred HHHHHhhhhh-hccccCCCCccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCCcchheeeecccccc
Confidence 3455554433 2344333 457899999999999999988521 13478898876645789999999997
Q ss_pred CCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhcc----ccCCceEEEEEecCCCC---------ccchHHHHH
Q 013076 123 PLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHR----EELKGTVVLVFQPAEEG---------GGGAHKVLE 189 (450)
Q Consensus 123 p~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~----~~~~~~i~~~~~~dEEg---------~~Ga~~l~~ 189 (450)
-.. .|.| +-+-|+-.++|+++..+.++.+.- ....-.+.++|.-+||. -.|++++.+
T Consensus 130 ~~p---~~~~-------vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~eW~p~DSlYGsRhLA~ 199 (338)
T KOG3946|consen 130 IFP---GGMF-------VGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEEWGPEDSLYGSRHLAA 199 (338)
T ss_pred cCC---Ccce-------EeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhhcCCccccchHHHHHH
Confidence 321 1111 112344578899999888776431 13446799999999982 147777755
No 79
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=95.94 E-value=0.027 Score=57.31 Aligned_cols=44 Identities=32% Similarity=0.268 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHccc
Q 013076 147 GHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGV 192 (450)
Q Consensus 147 g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~ 192 (450)
.|++++|.+++.|+... ++.+|.|++...|| |..|+.+++.+..
T Consensus 231 sGva~llEiAr~l~~~~--p~~~v~f~~~~aEE~Gl~GS~~~~~~~~ 275 (435)
T COG2234 231 SGVAALLELARVLKGNP--PKRTVRFVAFGAEESGLLGSEAYVKRLS 275 (435)
T ss_pred HHHHHHHHHHHHHhcCC--CCceEEEEEecchhhcccccHHHHhcCC
Confidence 78999999999998764 88999999999999 8899999998644
No 80
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=95.17 E-value=0.44 Score=48.57 Aligned_cols=131 Identities=15% Similarity=0.127 Sum_probs=83.6
Q ss_pred HHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecc-------cCCceEEEEEcCC-CCceEEEE
Q 013076 45 LNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP-------VAVTGVVGFIGTG-EPPFVALR 116 (450)
Q Consensus 45 ~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~-------~~~~nvva~~~~~-~~~~ill~ 116 (450)
.+.++.-....+.+.+.|+|+..|.--......++++++.+++.|+++++. .+.+.+++.=.++ ..|.++..
T Consensus 161 ~~~~~~~~~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~prli~l 240 (483)
T PRK00913 161 EKAIAHGEAIAEGVNLARDLVNEPPNILTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSANPPRLIVL 240 (483)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCCCCCeEEEE
Confidence 334444444467788999999999876777889999999999999998862 2334455543333 34666655
Q ss_pred eecc----CCCCcCcCCCcccc-----CCCCceec-ccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 117 ADMD----SLPLQEMVEWEYKS-----KIPGKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 117 ~H~D----vVp~~~~~~w~~~~-----~~~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
-+-- .+-+| .+.+|++ +..+.|++ ++..+|.|+.+++++++.+. +++.+|..++...|=
T Consensus 241 ~Y~g~~~~i~LVG--KGITFDsGG~slKp~~~M~~MK~DM~GAAaVlga~~aia~l--kl~vnV~~v~~l~EN 309 (483)
T PRK00913 241 EYKGGKKPIALVG--KGLTFDSGGISLKPAAGMDEMKYDMGGAAAVLGTMRALAEL--KLPVNVVGVVAACEN 309 (483)
T ss_pred EECCCCCeEEEEc--CceEecCCCccCCCCcChhhcccccHhHHHHHHHHHHHHHc--CCCceEEEEEEeecc
Confidence 4431 11111 1334542 11122322 12249999999999999886 467888888877665
No 81
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=95.06 E-value=0.066 Score=56.78 Aligned_cols=78 Identities=22% Similarity=0.279 Sum_probs=57.3
Q ss_pred CceEEEEEcCC--CCceEEEEeeccCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHH---HHhccccCCceEEE
Q 013076 98 VTGVVGFIGTG--EPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKI---LQEHREELKGTVVL 172 (450)
Q Consensus 98 ~~nvva~~~~~--~~~~ill~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~---l~~~~~~~~~~i~~ 172 (450)
-.||+|.+.|. +...|++.+|-|..-.|.. ....|++.++...++ +++.+.+|.++|+|
T Consensus 338 i~NIig~I~Gs~epD~~ViigahrDSw~~Ga~----------------dp~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F 401 (702)
T KOG2195|consen 338 IQNIIGKIEGSEEPDRYVIIGAHRDSWTFGAI----------------DPNSGTALLLEIARALSKLKKRGWRPRRTILF 401 (702)
T ss_pred eeeEEEEEecCcCCCeEEEEeccccccccCCc----------------CCCccHHHHHHHHHHHHHHHHcCCCccceEEE
Confidence 35899999773 4688999999998754310 012345555555544 45678899999999
Q ss_pred EEecCCC-CccchHHHHHcc
Q 013076 173 VFQPAEE-GGGGAHKVLEAG 191 (450)
Q Consensus 173 ~~~~dEE-g~~Ga~~l~~~~ 191 (450)
+...+|| |..|+-.++++.
T Consensus 402 ~sWdAeEfGliGStE~~E~~ 421 (702)
T KOG2195|consen 402 ASWDAEEFGLLGSTEWAEEY 421 (702)
T ss_pred EEccchhccccccHHHHHHH
Confidence 9999999 889999988853
No 82
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=94.42 E-value=1.4 Score=45.07 Aligned_cols=125 Identities=16% Similarity=0.159 Sum_probs=79.5
Q ss_pred hHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecc-------cCCceEEEEEcCC-CCceEEEEeeccCCCC
Q 013076 53 LVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP-------VAVTGVVGFIGTG-EPPFVALRADMDSLPL 124 (450)
Q Consensus 53 ~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~-------~~~~nvva~~~~~-~~~~ill~~H~DvVp~ 124 (450)
...+-+.+.|+|+.-|.--......++++++.+++.|+++++. .+.+.+++.=.++ ..|.++..-+-..-+.
T Consensus 152 ~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~p~lv~l~Y~g~~~~ 231 (468)
T cd00433 152 AIAEGVNLARDLVNTPANDLTPTYLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEEPPRLIVLEYKGKGAS 231 (468)
T ss_pred HHHHHHHHHHHhhcCCcccCCHHHHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCCCCEEEEEEECCCCCC
Confidence 3466788999999999877777889999999999999999862 2344455553333 3466665544422110
Q ss_pred cC-----cCCCcccc----CC-CCceec-ccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 125 QE-----MVEWEYKS----KI-PGKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 125 ~~-----~~~w~~~~----~~-~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
.. ..+.+|++ .+ ...|.+ +..++|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 232 ~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlga~~aia~l~--~~vnV~~i~~~~EN 295 (468)
T cd00433 232 KKPIALVGKGITFDTGGLSLKPAAGMDGMKYDMGGAAAVLGAMKAIAELK--LPVNVVGVLPLAEN 295 (468)
T ss_pred CCcEEEEcCceEecCCCccccCccChhhccccchhHHHHHHHHHHHHHcC--CCceEEEEEEeeec
Confidence 00 01223442 11 111211 111499999999999998864 67888888776655
No 83
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=94.13 E-value=0.7 Score=44.18 Aligned_cols=110 Identities=20% Similarity=0.181 Sum_probs=70.9
Q ss_pred HHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceeccc--------------------CCce-EEEEEcCC---CCceE
Q 013076 58 IGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV--------------------AVTG-VVGFIGTG---EPPFV 113 (450)
Q Consensus 58 ~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~--------------------~~~n-vva~~~~~---~~~~i 113 (450)
+.+.|+|+..|.---.....++++++.+++.|+++++.+ ..+. ++.++.+. ..++|
T Consensus 1 vn~aRdL~n~P~n~~~P~~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~~~~~~~i 80 (311)
T PF00883_consen 1 VNLARDLVNTPPNILTPETFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNGGKSKKPI 80 (311)
T ss_dssp HHHHHHHHHS-TTTSSHHHHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETSTSTTSEEE
T ss_pred ChHHHhhhCCChhhcCHHHHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCCCCCCccE
Confidence 357899999998777888999999999999999887521 1112 33344322 13556
Q ss_pred EEEeeccCCCCcCcCCCcccc-----CCCCceec-ccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 114 ALRADMDSLPLQEMVEWEYKS-----KIPGKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 114 ll~~H~DvVp~~~~~~w~~~~-----~~~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
+|.|- +.+|++ +..+.|.+ ++.++|.|+.+++++++.+. +++.+|..++...|=
T Consensus 81 ~LVGK----------GiTFDtGG~~lKp~~~M~~Mk~DM~GAAaV~ga~~aia~l--k~~vnV~~~l~~~EN 140 (311)
T PF00883_consen 81 ALVGK----------GITFDTGGLSLKPSGGMEGMKYDMGGAAAVLGAMRAIAKL--KLPVNVVAVLPLAEN 140 (311)
T ss_dssp EEEEE----------EEEEEE-TTSSSCSTTGGGGGGGGHHHHHHHHHHHHHHHC--T-SSEEEEEEEEEEE
T ss_pred EEEcc----------eEEEecCCccCCCCcchhhcccCcchHHHHHHHHHHHHHc--CCCceEEEEEEcccc
Confidence 65543 223432 12233433 33369999999999999886 466888888776654
No 84
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=93.01 E-value=0.38 Score=44.31 Aligned_cols=67 Identities=24% Similarity=0.314 Sum_probs=52.1
Q ss_pred ceEEEEeeccCCCCcCcCCCccccCCCCceecccc---hHHHHHHHHHHHHHHhc---cccCCceEEEEEecCCC-Cccc
Q 013076 111 PFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEH---REELKGTVVLVFQPAEE-GGGG 183 (450)
Q Consensus 111 ~~ill~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~dEE-g~~G 183 (450)
|.|++.+.||+.-.=. +. +.|+ =.|++++|+++++|.+. ...++++|.|.|..+|- +-.|
T Consensus 1 ~iIlv~armDs~s~F~-----------~~--s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiG 67 (234)
T PF05450_consen 1 PIILVVARMDSFSFFH-----------DL--SPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIG 67 (234)
T ss_pred CEEEEEecccchhccc-----------CC--CCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccc
Confidence 6789999999884311 21 4455 38899999999999865 23578999999999999 7789
Q ss_pred hHHHHHc
Q 013076 184 AHKVLEA 190 (450)
Q Consensus 184 a~~l~~~ 190 (450)
++.++.+
T Consensus 68 S~R~vyD 74 (234)
T PF05450_consen 68 SSRFVYD 74 (234)
T ss_pred hHHHHHH
Confidence 9998864
No 85
>PRK05015 aminopeptidase B; Provisional
Probab=91.05 E-value=8.5 Score=38.41 Aligned_cols=120 Identities=18% Similarity=0.142 Sum_probs=71.7
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhc---CCceecc-------cCCceEEEEEcCCC-CceEEEEeeccCCC
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKM---GIKYKHP-------VAVTGVVGFIGTGE-PPFVALRADMDSLP 123 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~---G~~~~~~-------~~~~nvva~~~~~~-~~~ill~~H~DvVp 123 (450)
-+.+.+.|+|+.-|.--......++..+++++++ ++++++. .+...+++.=.++. .|.++.. +| -|
T Consensus 100 ~~~~~~aRdLvn~P~n~ltP~~lA~~a~~~~~~~~~~~v~v~Vl~~~~L~~~gmggilaVgrGS~~pP~lv~L-~Y--~~ 176 (424)
T PRK05015 100 LKIIDWVRDTINAPAEELGPEQLAQRAADLICSVAGDAVSYRIIKGEDLREQGYMGIHTVGRGSERPPVLLAL-DY--NP 176 (424)
T ss_pred HHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHhhccCceEEEEeeHHHHHHCCCCceeeeeccCCCCCEEEEE-Ee--cC
Confidence 3467899999999987666677888888888776 5777652 23344555433332 3555532 32 24
Q ss_pred CcCcC----------CCcccc----CC-CCceec-ccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 124 LQEMV----------EWEYKS----KI-PGKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 124 ~~~~~----------~w~~~~----~~-~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
.++.+ +.+|++ .+ .+.|.+ +...+|.|+.++++.++.+. .++.+|..++...|=
T Consensus 177 ~g~~~~~v~~aLVGKGITFDSGG~sLKps~~M~~MK~DMgGAAaV~ga~~~a~~~--~l~~nV~~il~~aEN 246 (424)
T PRK05015 177 TGDPDAPVYACLVGKGITFDSGGYSIKPSAGMDSMKSDMGGAATVTGALALAITR--GLNKRVKLFLCCAEN 246 (424)
T ss_pred CCCCCCCeeEEEecCceEecCCCccCCCCcCHHHhhcchhHHHHHHHHHHHHHhc--CCCceEEEEEEeccc
Confidence 33211 122331 00 111111 11149999999999887765 577899998887766
No 86
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=90.95 E-value=2.3 Score=43.20 Aligned_cols=123 Identities=15% Similarity=0.115 Sum_probs=80.4
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceeccc------CCce-EEEEEcCC-CCceEEEEeeccCCCCcC
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV------AVTG-VVGFIGTG-EPPFVALRADMDSLPLQE 126 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~n-vva~~~~~-~~~~ill~~H~DvVp~~~ 126 (450)
.+...+.|+|..-|.--......++++++++...|+.+++.+ ..-| +++.=.++ ..|.++...|.++=|...
T Consensus 189 ~~~~~lar~l~d~PaN~Mtp~~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~~pP~ll~lsY~g~~~~~~ 268 (513)
T KOG2597|consen 189 AAAQNLARRLGDTPANRMTPTQFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASCEPPRLLELSYKGTSGADK 268 (513)
T ss_pred HHHHHHHHHhccCChhhcCHHHHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccCCCCEEEEEEEcCCCCCcc
Confidence 667788889988887666677899999999999998876521 2233 33332333 347777777776655332
Q ss_pred c-----CCCcccc-----CCCCceec-ccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 127 M-----VEWEYKS-----KIPGKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 127 ~-----~~w~~~~-----~~~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
. .+.+|++ +..+.|.+ |+.++|.|+.+++++++.+.+ ++-++.+++.-.|=
T Consensus 269 ~i~lvGKGvtfDsGGl~iK~~~~M~~mr~dm~GAA~v~~~~~a~~~l~--~~in~~~v~plcEN 330 (513)
T KOG2597|consen 269 TILLVGKGVTFDSGGLSIKPKTGMDGMRRDMGGAAVVLGAFRAAAQLS--LPINVHAVLPLCEN 330 (513)
T ss_pred eEEEEecceEEecCccccccCCChhhhhhhccccHHHHHHHHHHHhcC--CCCceEEEEeeecc
Confidence 1 1223442 11223333 444699999999999988765 55778887776665
No 87
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=90.44 E-value=7.6 Score=40.06 Aligned_cols=128 Identities=14% Similarity=0.105 Sum_probs=78.6
Q ss_pred HHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCcee-cc-------cCCceEEEEEcCCC-CceEEEEe
Q 013076 47 FAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYK-HP-------VAVTGVVGFIGTGE-PPFVALRA 117 (450)
Q Consensus 47 ~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~-~~-------~~~~nvva~~~~~~-~~~ill~~ 117 (450)
.++.-.+.-+.+.+.|+|+.-|.--......++++++.+.+.|++++ +. .+...+++.=.++. .|.++...
T Consensus 204 ~~~~g~~ia~~vn~ARdLvn~P~N~ltP~~~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~pPrli~L~ 283 (569)
T PTZ00412 204 AIAAGNIIGHCVNEARNLGNLREDEGVPQFYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRHEPYLVVFE 283 (569)
T ss_pred HHHHHHHHHHHHHHHHHhccCChhhcCHHHHHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCCCCEEEEEE
Confidence 34443344667889999999998666667889999998888999986 41 13344555544432 35555444
Q ss_pred eccCCCCcCc--------CCCcccc----CC-CCceec-ccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 118 DMDSLPLQEM--------VEWEYKS----KI-PGKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 118 H~DvVp~~~~--------~~w~~~~----~~-~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
|. |.... .+.+|++ .+ .+.|.. ++..+|.|+.+++++++.+. +++.+|..++...|=
T Consensus 284 Y~---g~~~~~~~iaLVGKGITFDSGGisLKP~~~M~~MK~DMgGAAaVlga~~AiA~L--klpvnVv~iiplaEN 354 (569)
T PTZ00412 284 YI---GNPRSSAATALVGKGVTFDCGGLNIKPYGSMETMHSDMMGAATVMCTLKAIAKL--QLPVNVVAAVGLAEN 354 (569)
T ss_pred eC---CCCCCCCcEEEEcCceEEcCCCCCCCCccChhhhhccchhHHHHHHHHHHHHHc--CCCeEEEEEEEhhhc
Confidence 42 21110 1223442 11 111221 11149999999999999876 467888888776655
No 88
>PRK02256 putative aminopeptidase 1; Provisional
Probab=90.32 E-value=0.43 Score=48.50 Aligned_cols=76 Identities=11% Similarity=-0.004 Sum_probs=57.7
Q ss_pred CChHHHHHHHHHHHhhcCCccccccC----CCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHH
Q 013076 345 NNNDLHKYFQTVAGDMLDTQKVKVMA----PVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPY 419 (450)
Q Consensus 345 ~d~~~~~~~~~~~~~~~g~~~~~~~~----~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~ 419 (450)
.|..+...+++.+++. +.+.+.... ..+|+||...+++. +|++-+|++.. .+|++.|-+..+++..
T Consensus 380 ~~~~~~~~i~~iA~~~-~Ip~Q~~~~~r~d~~~GgTig~~~s~~Gi~tvdiGiP~l--------~MHS~rE~~~~~D~~~ 450 (462)
T PRK02256 380 ANAEFVAEVRNLFNKN-NVVWQTAELGKVDQGGGGTIAKFLANYGMEVIDCGVALL--------SMHSPFEIASKADIYE 450 (462)
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeecCCCCCcChHHHHHcCCCCcEEEechhhh--------ccccHHHHhhHHHHHH
Confidence 3777888899988887 877542112 23679997777754 89887666643 4999999999999999
Q ss_pred HHHHHHHHHH
Q 013076 420 GAALHASLAL 429 (450)
Q Consensus 420 ~~~~~~~~~~ 429 (450)
.++++..++.
T Consensus 451 ~~~ll~~f~~ 460 (462)
T PRK02256 451 TYKAYKAFLE 460 (462)
T ss_pred HHHHHHHHHh
Confidence 9999988753
No 89
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=89.50 E-value=0.71 Score=47.10 Aligned_cols=79 Identities=9% Similarity=-0.028 Sum_probs=60.3
Q ss_pred CChHHHHHHHHHHHhhcCCcccccc--CCCcccchHHHHhhh---cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHH
Q 013076 345 NNNDLHKYFQTVAGDMLDTQKVKVM--APVMGSEDFSFYQEV---MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPY 419 (450)
Q Consensus 345 ~d~~~~~~~~~~~~~~~g~~~~~~~--~~~~g~tD~~~~~~~---~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~ 419 (450)
+|......+++.+++. |.+.+... ...+|++|.+.+... +|++-+|++.. .+|++.|-+..+++..
T Consensus 373 td~~~~a~i~~la~~~-~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP~l--------~MHS~rE~~~~~D~~~ 443 (465)
T PTZ00371 373 TNGVTASLLKAIAKKA-NIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIPQL--------AMHSIREMCGVVDIYY 443 (465)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHHhCCCCcEEEechhhc--------ccccHHHHccHHHHHH
Confidence 4788999999999887 77644211 234568888887652 88877666543 4999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 013076 420 GAALHASLALRYL 432 (450)
Q Consensus 420 ~~~~~~~~~~~l~ 432 (450)
.++++..++..+.
T Consensus 444 ~~~l~~af~~~~~ 456 (465)
T PTZ00371 444 LVKLIKAFFTNYS 456 (465)
T ss_pred HHHHHHHHHHhhh
Confidence 9999999887543
No 90
>PRK02813 putative aminopeptidase 2; Provisional
Probab=89.33 E-value=0.58 Score=47.22 Aligned_cols=75 Identities=7% Similarity=-0.023 Sum_probs=56.5
Q ss_pred CChHHHHHHHHHHHhhcCCcccccc--CCCcccchHHHHhhh---cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHH
Q 013076 345 NNNDLHKYFQTVAGDMLDTQKVKVM--APVMGSEDFSFYQEV---MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPY 419 (450)
Q Consensus 345 ~d~~~~~~~~~~~~~~~g~~~~~~~--~~~~g~tD~~~~~~~---~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~ 419 (450)
+|......+++++++. +.+.+... ...+|++|++.+... +|++-+|++.. .+|++.|-++.+++..
T Consensus 346 t~~~~~a~~~~ia~~~-~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP~l--------~MHS~~E~~~~~D~~~ 416 (428)
T PRK02813 346 TDAESAAVFKLLCEKA-GVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDVGAPML--------AMHSARELAGVKDHAY 416 (428)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEeChhhc--------ccccHHHHccHHHHHH
Confidence 4777888888888887 77654221 223478888887652 88877666543 4999999999999999
Q ss_pred HHHHHHHHH
Q 013076 420 GAALHASLA 428 (450)
Q Consensus 420 ~~~~~~~~~ 428 (450)
.++++..++
T Consensus 417 ~~~l~~~f~ 425 (428)
T PRK02813 417 LIKALTAFF 425 (428)
T ss_pred HHHHHHHHh
Confidence 999988765
No 91
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=88.15 E-value=0.95 Score=46.62 Aligned_cols=45 Identities=11% Similarity=0.106 Sum_probs=40.8
Q ss_pred CCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 013076 269 LDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIG 319 (450)
Q Consensus 269 ~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~ 319 (450)
+...|+|++.|.++ |++|.+.+|+|++++++++++.+.|+++++.
T Consensus 335 ~~~~t~n~g~i~~~------~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~ 379 (477)
T TIGR01893 335 LVESSLNLGVVKTK------ENKVIFTFLIRSSVESDKDYVTEKIESIAKL 379 (477)
T ss_pred eEEeeeeEEEEEEc------CCEEEEEEEeCCCCchhHHHHHHHHHHHhhh
Confidence 45678999999976 7899999999999999999999999999984
No 92
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=85.16 E-value=21 Score=36.59 Aligned_cols=117 Identities=21% Similarity=0.214 Sum_probs=71.8
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcC-Cceecc-------cCCceEEEEEcCC-CCceEEEEeeccCCCCc
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMG-IKYKHP-------VAVTGVVGFIGTG-EPPFVALRADMDSLPLQ 125 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G-~~~~~~-------~~~~nvva~~~~~-~~~~ill~~H~DvVp~~ 125 (450)
-+.+.+.|+|+..|.---.....++. ++.|.+.+ +++++. .+.+.+++.=.++ ..|+++.. +=-+.+
T Consensus 167 ~~~v~~aRdLvN~P~n~l~P~~la~~-a~~la~~~~v~veVl~~~~l~~~gmg~llaVg~GS~~~Prlivl---~y~g~~ 242 (485)
T COG0260 167 AEGVNLARDLVNTPANILTPEELAER-AELLAKLGGVKVEVLDEKDLEKLGMGALLAVGKGSARPPRLIVL---EYNGKG 242 (485)
T ss_pred HHHHHHHHHHhhCCcccCCHHHHHHH-HHHHhhcCCceEEEecHHHHHHcCCceeeeeccCCCCCCeEEEE---EcCCCC
Confidence 56788999999999876677778888 77777775 777752 2334455543333 23555522 222211
Q ss_pred C--------cCCCccccCCCCc--eeccc---c---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 126 E--------MVEWEYKSKIPGK--MHACG---H---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 126 ~--------~~~w~~~~~~~g~--l~GrG---~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
+ ..+.+|++ +|. =-+-| + .||.|+.++++.++.+. +++.++..+....|=
T Consensus 243 ~~~~~iaLVGKGitFDs--GGisiKp~~~M~~MK~DMgGAAaV~g~~~a~a~l--~l~vnv~~vl~~~EN 308 (485)
T COG0260 243 KAKKPIALVGKGITFDS--GGISIKPAAGMDTMKYDMGGAAAVLGAMRALAEL--KLPVNVVGVLPAVEN 308 (485)
T ss_pred CCCceEEEEcCceeecC--CCcccCCccchhhhhcccchHHHHHHHHHHHHHc--CCCceEEEEEeeecc
Confidence 1 01234442 111 01222 2 39999999999999886 477888888776665
No 93
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=52.67 E-value=30 Score=33.69 Aligned_cols=70 Identities=26% Similarity=0.218 Sum_probs=42.4
Q ss_pred eEEEEEcCCCCceEEEEeeccCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 100 GVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 100 nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
|+|+.-+ +.+.++++.+|.|+=-.|.. |+. .|++..+.++..|+..+ ..+-++..+.||
T Consensus 180 ~~Ia~~~-~en~vv~i~AH~DHW~~G~t---------DN~-------lg~~~AV~~~~~lr~~~----~~~~lv~FtAEE 238 (486)
T COG4882 180 NVIAVDG-GENGVVLIGAHLDHWYTGFT---------DNI-------LGVAQAVETAGRLRGRG----LAAGLVVFTAEE 238 (486)
T ss_pred EEEEecC-CCCCceEEeechhhhhhccc---------chh-------hhHHHHHHHHHHHhhcC----cceeEEEEeccc
Confidence 4444322 33478888899888765531 233 36777777777776554 234555556677
Q ss_pred -Cc---------cchHHHHHc
Q 013076 180 -GG---------GGAHKVLEA 190 (450)
Q Consensus 180 -g~---------~Ga~~l~~~ 190 (450)
|+ .|++.++++
T Consensus 239 ~g~p~~~sfyWa~GSr~~lk~ 259 (486)
T COG4882 239 HGMPGMASFYWAAGSRGLLKE 259 (486)
T ss_pred cCCCCCcceeecccchHHHhh
Confidence 54 377777764
No 94
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=51.13 E-value=18 Score=20.54 Aligned_cols=17 Identities=29% Similarity=0.673 Sum_probs=8.4
Q ss_pred hhhHHHHHHHHHHhCCC
Q 013076 7 FSKWVFVVFVLHLLNPC 23 (450)
Q Consensus 7 ~~~~~~~~~~~~~~~~~ 23 (450)
|+|+.|++++++.+..+
T Consensus 7 mKkil~~l~a~~~LagC 23 (25)
T PF08139_consen 7 MKKILFPLLALFMLAGC 23 (25)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 34455555555544443
No 95
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=49.32 E-value=58 Score=33.61 Aligned_cols=44 Identities=9% Similarity=0.003 Sum_probs=36.8
Q ss_pred CceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 013076 271 SQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQ 320 (450)
Q Consensus 271 ~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~ 320 (450)
.+|+|++.+.- --+.+++.+++|++++.+.+++.++|+...+..
T Consensus 343 ~~S~Nlg~v~~------~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~ 386 (485)
T PRK15026 343 ETSLNVGVVTM------TDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLA 386 (485)
T ss_pred EeeeEEEEEEE------eCCEEEEEEEecCCCchHHHHHHHHHHHHHHHc
Confidence 46788888753 347899999999999999999999999887654
No 96
>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis. PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain
Probab=49.26 E-value=1e+02 Score=23.10 Aligned_cols=57 Identities=11% Similarity=0.038 Sum_probs=35.7
Q ss_pred EEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHH
Q 013076 292 VLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYF 353 (450)
Q Consensus 292 a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~ 353 (450)
.+..|-+|.+++.+..++.++|.+.++-. +-.+.+.+.........+. +|.++-.++
T Consensus 9 f~~tIaIrvp~~~~y~~L~~ki~~kLkl~----~e~i~LsYkde~s~~~v~l-~d~dle~aw 65 (80)
T cd06406 9 FKYTVAIQVARGLSYATLLQKISSKLELP----AEHITLSYKSEASGEDVIL-SDTNMEDVW 65 (80)
T ss_pred EEEEEEEEcCCCCCHHHHHHHHHHHhCCC----chhcEEEeccCCCCCccCc-ChHHHHHHH
Confidence 45588899999999999999999988632 2234455432223334444 455544443
No 97
>PRK06156 hypothetical protein; Provisional
Probab=43.68 E-value=1.7e+02 Score=30.48 Aligned_cols=25 Identities=20% Similarity=0.316 Sum_probs=21.8
Q ss_pred eEEEEEEecCCCCCCCCCeEEEEEE
Q 013076 273 VVTVAKFQGGGAFNVIPDSVLIGGT 297 (450)
Q Consensus 273 t~~i~~i~gG~~~nviP~~a~~~id 297 (450)
+.++..++||...|+||+.|.+.+.
T Consensus 240 ~~~l~~~~gG~~~n~ip~~a~~~~~ 264 (520)
T PRK06156 240 GAEIVAMTGGAFANQIPQTAVATLS 264 (520)
T ss_pred ceeEEEEEcCCcCCCCCCccEEEEe
Confidence 5678889999999999999998844
No 98
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=41.60 E-value=3.1e+02 Score=28.80 Aligned_cols=112 Identities=16% Similarity=0.226 Sum_probs=65.2
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceeccc---------CCceEEEEEcC--CC-CceEEEEeeccCC
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV---------AVTGVVGFIGT--GE-PPFVALRADMDSL 122 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~---------~~~nvva~~~~--~~-~~~ill~~H~DvV 122 (450)
....++++++.++.--.+.+ .-.|+...+++.|.++.... .+.||++.+++ ++ ...++| +|
T Consensus 70 ~~~~~~~~~~~~~r~~~s~~--~~~~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl-----~v 142 (617)
T KOG3566|consen 70 SDASKLLKDIKNFRKHESQV--PNAWAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVL-----VV 142 (617)
T ss_pred hhhHHHHHHHHHHHHhhccc--chhHHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEE-----EE
Confidence 33444444444433222222 23446677777798876422 26799999954 22 355665 46
Q ss_pred CCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCccchHHHHHc
Q 013076 123 PLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEA 190 (450)
Q Consensus 123 p~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~~Ga~~l~~~ 190 (450)
|-+...+ + ..++++.+++.++.+++. .-..++|+++++-++ -.|.+.++++
T Consensus 143 P~~~~~~--------~------~~~~v~l~lsla~~f~r~-~yWsKDII~v~~d~~--~~g~~AwLea 193 (617)
T KOG3566|consen 143 PYGRSSG--------S------NSASVALLLSLADYFSRW-VYWSKDIIFVFTDGP--ALGLDAWLEA 193 (617)
T ss_pred ecccCCC--------c------chhHHHHHHHHHHHhcCC-eeecccEEEEEeCCc--cccHHHHHHH
Confidence 6432111 1 136777788788887765 367899999998653 2466666664
No 99
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=38.19 E-value=20 Score=30.68 Aligned_cols=33 Identities=18% Similarity=0.137 Sum_probs=27.8
Q ss_pred HhHcCCCCCcchHHHHHHHHHHHHhcCCceecc
Q 013076 63 KIHQNPELGYQEFETSQLIRSELDKMGIKYKHP 95 (450)
Q Consensus 63 ~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~ 95 (450)
.|+..-+..|+.++++++|+..|++.|++++..
T Consensus 3 ~LIlYstr~GqT~kIA~~iA~~L~e~g~qvdi~ 35 (175)
T COG4635 3 TLILYSTRDGQTRKIAEYIASHLRESGIQVDIQ 35 (175)
T ss_pred eEEEEecCCCcHHHHHHHHHHHhhhcCCeeeee
Confidence 355666777899999999999999999999754
No 100
>PRK02256 putative aminopeptidase 1; Provisional
Probab=37.84 E-value=50 Score=33.82 Aligned_cols=43 Identities=26% Similarity=0.247 Sum_probs=27.8
Q ss_pred ceecccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchH
Q 013076 139 KMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAH 185 (450)
Q Consensus 139 ~l~GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~ 185 (450)
.|.|.+- ..++.+++.++..++ .++..++++++..|| |+.|+.
T Consensus 253 fI~s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs~ga~ 298 (462)
T PRK02256 253 LIGAYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGSEGNT 298 (462)
T ss_pred eeeccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCCcchh
Confidence 4444444 366666666665442 456789999999999 765443
No 101
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=33.85 E-value=21 Score=18.34 Aligned_cols=10 Identities=30% Similarity=0.518 Sum_probs=4.7
Q ss_pred hhhHHHHHHH
Q 013076 7 FSKWVFVVFV 16 (450)
Q Consensus 7 ~~~~~~~~~~ 16 (450)
|||+.+++.+
T Consensus 1 MMk~vIIlvv 10 (19)
T PF13956_consen 1 MMKLVIILVV 10 (19)
T ss_pred CceehHHHHH
Confidence 4575544333
No 102
>COG0766 MurA UDP-N-acetylglucosamine enolpyruvyl transferase [Cell envelope biogenesis, outer membrane]
Probab=33.47 E-value=1.7e+02 Score=29.23 Aligned_cols=65 Identities=17% Similarity=0.302 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCCceEEEEEEe--cCCCCCCCCCeEEE------------EEEEecCChhhHHHHHHHH
Q 013076 248 ILAASNVIVSLQHLVSREADPLDSQVVTVAKFQ--GGGAFNVIPDSVLI------------GGTFRAFSKESFTQLKQRI 313 (450)
Q Consensus 248 i~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~--gG~~~nviP~~a~~------------~idiR~~~~~~~~~~~~~i 313 (450)
|..++.+|+++-.- ....+..++.+..+. .|....+|||+-++ .+.++-...+..+.+.+++
T Consensus 193 IvDLa~~Ln~MGA~----I~GaGT~~I~I~GV~~L~g~~h~VipDRIEAGT~~~aaA~tgg~v~i~~v~~~hl~~~~~kL 268 (421)
T COG0766 193 IVDLANFLNKMGAK----IEGAGTSTITIEGVEKLHGAEHSVIPDRIEAGTFLVAAAITGGDVTIENVRPEHLEAVLAKL 268 (421)
T ss_pred HHHHHHHHHHcCCe----eEEcCCCeEEEeccccccceeeEecCchhhHHHHHHHHHHhCCcEEEeCCCHHHHHHHHHHH
Confidence 56667777666432 122355677777766 46678899999664 6777777777777777777
Q ss_pred HHH
Q 013076 314 EEV 316 (450)
Q Consensus 314 ~~~ 316 (450)
+++
T Consensus 269 ~e~ 271 (421)
T COG0766 269 REA 271 (421)
T ss_pred HHh
Confidence 665
No 103
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=29.26 E-value=2.2e+02 Score=29.54 Aligned_cols=73 Identities=22% Similarity=0.305 Sum_probs=50.1
Q ss_pred CceEEEEEcC--CC-CceEEEEeeccCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEE
Q 013076 98 VTGVVGFIGT--GE-PPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVF 174 (450)
Q Consensus 98 ~~nvva~~~~--~~-~~~ill~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~ 174 (450)
+.|++|.++. ++ ...+++..-++... + ....++++.+|+.++++++.. -..+||+|++
T Consensus 3 G~nvy~i~rapR~d~tEaivl~~~~~~~~--------------~----~~n~~~v~l~lal~~~~~~~~-~wsKDii~l~ 63 (504)
T PF04114_consen 3 GTNVYGILRAPRGDGTEAIVLVVPWRDSD--------------G----EYNAGGVALALALARYFRRQS-YWSKDIIFLF 63 (504)
T ss_pred ceEEEEEEecCCCCCceeEEEEEecCCCC--------------c----ccchhhHHHHHHHHHHhhhch-hhhccEEEEe
Confidence 5799999854 22 36777765544321 1 011368899999999999875 5689999999
Q ss_pred ecCCCCccchHHHHHcc
Q 013076 175 QPAEEGGGGAHKVLEAG 191 (450)
Q Consensus 175 ~~dEEg~~Ga~~l~~~~ 191 (450)
+.+|. .|.+..+++.
T Consensus 64 ~~~~~--~g~~awl~~Y 78 (504)
T PF04114_consen 64 TDDEL--AGMQAWLEAY 78 (504)
T ss_pred cCCcc--hHHHHHHHHH
Confidence 86543 5777777753
No 104
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=28.51 E-value=2e+02 Score=28.44 Aligned_cols=68 Identities=16% Similarity=0.110 Sum_probs=40.8
Q ss_pred EEEEE--cCCCCceEEEEeeccCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCC
Q 013076 101 VVGFI--GTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAE 178 (450)
Q Consensus 101 vva~~--~~~~~~~ill~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dE 178 (450)
-+|++ +|.....|+|.+|+.+=-.. ++.+ +|++.++..++.|++.. .+.+.+|+|.|+
T Consensus 118 ~ygE~~ipG~s~~EillsthiCHPsmA-----------NdnL------SG~~v~~~La~~L~~~~--~rytYRflf~Pe- 177 (386)
T PF09940_consen 118 TYGEFVIPGESDEEILLSTHICHPSMA-----------NDNL------SGPAVLTFLAKWLKQLP--NRYTYRFLFVPE- 177 (386)
T ss_dssp EEEEEEE--SSS-EEEEEEE----S-T-----------TTTH------HHHHHHHHHHHHHTTS----SSEEEEEEE-T-
T ss_pred eEEEEEecCCCCCeEEEEEeccCcccc-----------cccc------cHHHHHHHHHHHHhcCC--cCceEEEEEccc-
Confidence 34554 55556899999998874322 1334 78888888899998764 449999999984
Q ss_pred CCccchHHHHHc
Q 013076 179 EGGGGAHKVLEA 190 (450)
Q Consensus 179 Eg~~Ga~~l~~~ 190 (450)
..|+..++.+
T Consensus 178 --TIGsI~yLsk 187 (386)
T PF09940_consen 178 --TIGSITYLSK 187 (386)
T ss_dssp --THHHHHHHHH
T ss_pred --cHHHHHHHHH
Confidence 3466666654
No 105
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=28.36 E-value=80 Score=29.94 Aligned_cols=32 Identities=19% Similarity=0.109 Sum_probs=25.3
Q ss_pred ceEEEEEEecCCCCCCCCCeEEEEEEEecCChh
Q 013076 272 QVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKE 304 (450)
Q Consensus 272 ~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~ 304 (450)
..+.++.++=|.... +|-.|.+.+|+|+.|+-
T Consensus 160 ~~l~v~i~SFGfK~G-iP~dAD~VfDvRfLpNP 191 (284)
T PF03668_consen 160 SRLTVTIQSFGFKYG-IPPDADLVFDVRFLPNP 191 (284)
T ss_pred CceEEEEEEeccccC-CCCCCCEEEEcCcCCCC
Confidence 356677777787655 89999999999999864
No 106
>PRK02813 putative aminopeptidase 2; Provisional
Probab=28.04 E-value=71 Score=32.38 Aligned_cols=42 Identities=26% Similarity=0.200 Sum_probs=26.4
Q ss_pred eecccch--HHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc---chHH
Q 013076 140 MHACGHD--GHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGG---GAHK 186 (450)
Q Consensus 140 l~GrG~k--g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~---Ga~~ 186 (450)
+.|.+-| .++.+++.|+..++ . +..++++++..|| |+. ||..
T Consensus 228 i~s~~lDnr~~~~~~l~al~~~~----~-~~~~~~~~~d~EEVGs~~~~GA~s 275 (428)
T PRK02813 228 ISSGRLDNLSSCHAGLEALLAAA----S-DATNVLAAFDHEEVGSATKQGADS 275 (428)
T ss_pred EEEecchhHHHHHHHHHHHHhcC----C-CCeEEEEEEecCccCCCCCcccCc
Confidence 4344443 55555555554332 1 6789999999999 776 7763
No 107
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=26.60 E-value=84 Score=31.66 Aligned_cols=69 Identities=19% Similarity=0.258 Sum_probs=40.5
Q ss_pred ceEEEEeeccCCCC-cCcCCCcccc------CCCCcee-cccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc
Q 013076 111 PFVALRADMDSLPL-QEMVEWEYKS------KIPGKMH-ACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG 181 (450)
Q Consensus 111 ~~ill~~H~DvVp~-~~~~~w~~~~------~~~g~l~-GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~ 181 (450)
..+.|.||+|.||. +......+.+ +.+.++- .+|++- ++..+.. ..|. ....++...++++|| +.
T Consensus 62 ~~~~L~a~~d~V~~i~~~sh~Dt~~d~~~~~v~~~~l~~~~Gad~-i~~~~~~-a~L~----~~~~P~~~~~t~~~ei~~ 135 (414)
T COG2195 62 VPAVLQAHLDMVPEIGFISHHDTVPDPIGPNVNPQILKATLGADN-IGLAIGL-AVLS----PEHFPLEVLLTGDEEITT 135 (414)
T ss_pred eeEEeeccccccccccccccccccccccccccCCceeeeccCcch-hhhhhHH-hhcC----cccCCceeeeecceEEec
Confidence 56889999999994 3333333331 2344555 566643 3322211 1221 136789999999999 65
Q ss_pred cchH
Q 013076 182 GGAH 185 (450)
Q Consensus 182 ~Ga~ 185 (450)
.|+-
T Consensus 136 dGa~ 139 (414)
T COG2195 136 DGAT 139 (414)
T ss_pred cCcc
Confidence 6655
No 108
>PRK13883 conjugal transfer protein TrbH; Provisional
Probab=25.38 E-value=2.3e+02 Score=24.15 Aligned_cols=19 Identities=16% Similarity=0.128 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHhcCCceec
Q 013076 76 ETSQLIRSELDKMGIKYKH 94 (450)
Q Consensus 76 ~~~~~l~~~l~~~G~~~~~ 94 (450)
.....|.+.||+.|+-+..
T Consensus 64 ~Fg~aL~~aLR~~GYaV~e 82 (151)
T PRK13883 64 AFGQALVKALRDKGYALLE 82 (151)
T ss_pred HHHHHHHHHHHHcCeEEEe
Confidence 5688899999999998764
No 109
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=24.55 E-value=1.9e+02 Score=29.47 Aligned_cols=25 Identities=28% Similarity=0.480 Sum_probs=20.8
Q ss_pred EEEEecCCCCCCCCCeEEEEEEEec
Q 013076 276 VAKFQGGGAFNVIPDSVLIGGTFRA 300 (450)
Q Consensus 276 i~~i~gG~~~nviP~~a~~~idiR~ 300 (450)
+..|++|...|.+|..|++.+-.+.
T Consensus 193 i~~~~~Ge~tn~~p~~a~~~v~~~~ 217 (447)
T TIGR01887 193 LESFKAGEAFNMVPDHATAVISGKE 217 (447)
T ss_pred EEEEeCCCcCCccCcceEEEEeccc
Confidence 3446789999999999999998774
No 110
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=23.56 E-value=1.3e+02 Score=30.07 Aligned_cols=77 Identities=9% Similarity=-0.061 Sum_probs=50.6
Q ss_pred CChHHHHHHHHHHHhhcCCcccc--ccCCCcccchHHH-H-hhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHH
Q 013076 345 NNNDLHKYFQTVAGDMLDTQKVK--VMAPVMGSEDFSF-Y-QEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPY 419 (450)
Q Consensus 345 ~d~~~~~~~~~~~~~~~g~~~~~--~~~~~~g~tD~~~-~-~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~ 419 (450)
+|.+.+..+++++++. |.+.+. .-...++++-.+. + ++. ++++= +|+.- -.+|++.|-....++..
T Consensus 354 td~~~~a~~~~l~~~~-~Vp~Q~f~~~~d~~~Gstigpi~aa~tGi~tID--iG~~~------LsMHS~rE~~g~~D~~~ 424 (437)
T COG1362 354 TDSEGIALLRKLAQKA-GVPWQVFVLRNDVPCGSTIGPILAARTGIRTID--IGPAL------LSMHSIRELSGSADLYE 424 (437)
T ss_pred cCchHHHHHHHHHHHc-CCceEEEEecccCCCCcccchhHHhhcCCceee--cchhh------hhhccHHHHcchhHHHH
Confidence 4777888888888887 765432 1112233333333 3 333 77654 55542 45999999999999999
Q ss_pred HHHHHHHHHHH
Q 013076 420 GAALHASLALR 430 (450)
Q Consensus 420 ~~~~~~~~~~~ 430 (450)
..+.|.+++.+
T Consensus 425 ~~~~~~aFf~~ 435 (437)
T COG1362 425 AYKALSAFFEN 435 (437)
T ss_pred HHHHHHHHHhc
Confidence 99999887653
No 111
>PRK14864 putative biofilm stress and motility protein A; Provisional
Probab=22.01 E-value=61 Score=25.67 Aligned_cols=24 Identities=13% Similarity=0.195 Sum_probs=19.7
Q ss_pred CCcchHHHHHHHHHHHHhcCCcee
Q 013076 70 LGYQEFETSQLIRSELDKMGIKYK 93 (450)
Q Consensus 70 ~s~~e~~~~~~l~~~l~~~G~~~~ 93 (450)
..+...++.+-|.+..++.|-+.-
T Consensus 58 ~~gsp~d~~~~La~KAda~GA~yY 81 (104)
T PRK14864 58 VRGSPDDAEREIQAKANAAGADYY 81 (104)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEE
Confidence 346778899999999999998764
No 112
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=20.42 E-value=4.4e+02 Score=26.91 Aligned_cols=24 Identities=21% Similarity=0.181 Sum_probs=19.8
Q ss_pred EEEEEecCCCCCCCCCeEEEEEEE
Q 013076 275 TVAKFQGGGAFNVIPDSVLIGGTF 298 (450)
Q Consensus 275 ~i~~i~gG~~~nviP~~a~~~idi 298 (450)
.+..++||...|+||+.|.+.+..
T Consensus 203 ~~~~~~~g~~~~~v~~~~~~~i~~ 226 (466)
T TIGR01886 203 VLDSFKAGLAENMVPQVARAVISG 226 (466)
T ss_pred eEEEEEcCCcCCccCCeeEEEEec
Confidence 345688999999999999988743
No 113
>PRK05416 glmZ(sRNA)-inactivating NTPase; Provisional
Probab=20.36 E-value=1e+02 Score=29.33 Aligned_cols=32 Identities=19% Similarity=0.048 Sum_probs=25.2
Q ss_pred eEEEEEEecCCCCCCCCCeEEEEEEEecCChhh
Q 013076 273 VVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKES 305 (450)
Q Consensus 273 t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~ 305 (450)
.+.++.++=|.... +|-.|.+.+|+|+.|+--
T Consensus 164 ~~~i~~~SFg~k~g-~p~dad~vfDvR~lpNP~ 195 (288)
T PRK05416 164 GLTVTVESFGFKYG-IPLDADLVFDVRFLPNPH 195 (288)
T ss_pred ceEEEEEeecccCC-CCCCCCEEEEeCcCCCCC
Confidence 46677777787666 688999999999998643
Done!