Query 013076
Match_columns 450
No_of_seqs 263 out of 1572
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 03:44:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013076.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013076hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xmb_A IAA-amino acid hydrolas 100.0 8.4E-63 2.9E-67 495.9 38.5 395 40-437 13-407 (418)
2 1ysj_A Protein YXEP; M20 famil 100.0 1.1E-60 3.6E-65 478.5 41.9 368 55-434 32-402 (404)
3 3io1_A Aminobenzoyl-glutamate 100.0 2.9E-60 9.8E-65 480.6 36.1 381 42-437 3-437 (445)
4 3pfo_A Putative acetylornithin 100.0 5.7E-55 2E-59 441.4 34.6 370 40-434 13-430 (433)
5 1cg2_A Carboxypeptidase G2; me 100.0 5E-54 1.7E-58 429.0 32.4 365 40-433 6-391 (393)
6 3ram_A HMRA protein; two-domai 100.0 1.6E-53 5.6E-58 424.5 35.9 360 40-435 3-376 (394)
7 3isz_A Succinyl-diaminopimelat 100.0 9.4E-53 3.2E-57 417.6 36.3 359 54-433 2-376 (377)
8 1vgy_A Succinyl-diaminopimelat 100.0 9.8E-53 3.4E-57 419.6 34.0 359 55-434 6-380 (393)
9 3dlj_A Beta-Ala-His dipeptidas 100.0 5.2E-52 1.8E-56 425.0 37.4 377 39-433 11-483 (485)
10 3rza_A Tripeptidase; phosphory 100.0 1.6E-52 5.4E-57 418.4 32.8 357 44-433 15-393 (396)
11 3gb0_A Peptidase T; NP_980509. 100.0 3.5E-51 1.2E-55 405.6 33.5 345 55-431 6-371 (373)
12 3tx8_A Succinyl-diaminopimelat 100.0 7E-52 2.4E-56 410.1 26.9 343 55-429 13-368 (369)
13 3pfe_A Succinyl-diaminopimelat 100.0 1.1E-50 3.7E-55 413.7 33.1 375 41-434 5-471 (472)
14 2zog_A Cytosolic non-specific 100.0 2.1E-50 7.1E-55 413.1 33.9 373 42-434 9-477 (479)
15 2pok_A Peptidase, M20/M25/M40 100.0 8.7E-51 3E-55 415.8 31.0 372 42-431 32-480 (481)
16 2f7v_A Aectylcitrulline deacet 100.0 2E-50 7E-55 399.4 28.7 339 48-429 4-366 (369)
17 3ct9_A Acetylornithine deacety 100.0 6.3E-50 2.2E-54 393.7 27.4 336 48-432 6-355 (356)
18 3khx_A Putative dipeptidase sa 100.0 2.5E-49 8.5E-54 405.1 29.9 362 40-434 21-491 (492)
19 3ife_A Peptidase T; metallopep 100.0 1.3E-48 4.6E-53 394.4 33.9 350 54-433 26-432 (434)
20 2rb7_A Peptidase, M20/M25/M40 100.0 2.4E-49 8.2E-54 390.8 27.4 336 55-434 6-361 (364)
21 1fno_A Peptidase T; metallo pe 100.0 1E-47 3.5E-52 386.3 31.3 347 55-435 2-408 (417)
22 1z2l_A Allantoate amidohydrola 100.0 5.7E-47 1.9E-51 381.6 33.6 349 47-434 3-412 (423)
23 2v8h_A Beta-alanine synthase; 100.0 3.8E-48 1.3E-52 394.9 25.1 358 55-448 32-462 (474)
24 3n5f_A L-carbamoylase, N-carba 100.0 4.1E-46 1.4E-50 373.4 35.3 340 55-432 5-406 (408)
25 2qyv_A XAA-His dipeptidase; YP 100.0 7.1E-46 2.4E-50 379.9 32.2 346 55-432 11-485 (487)
26 1lfw_A PEPV; hydrolase, dipept 100.0 3.8E-45 1.3E-49 373.2 33.8 359 44-434 5-467 (470)
27 3mru_A Aminoacyl-histidine dip 100.0 1.6E-45 5.4E-50 376.5 30.5 344 55-432 14-487 (490)
28 3t68_A Succinyl-diaminopimelat 100.0 1.2E-33 4E-38 266.6 20.0 248 55-433 6-268 (268)
29 4h2k_A Succinyl-diaminopimelat 100.0 2.4E-32 8.2E-37 257.7 22.7 249 54-433 5-268 (269)
30 1q7l_A Aminoacylase-1; catalys 99.9 9.2E-27 3.1E-31 209.2 14.7 170 55-229 10-198 (198)
31 2fvg_A Endoglucanase; TM1049, 99.9 2.2E-26 7.7E-31 224.3 14.9 248 60-433 3-335 (340)
32 1vhe_A Aminopeptidase/glucanas 99.9 1E-23 3.5E-28 208.0 21.3 256 55-434 7-355 (373)
33 2wyr_A Cobalt-activated peptid 99.9 4.7E-24 1.6E-28 207.3 17.2 239 57-430 4-331 (332)
34 2wzn_A TET3, 354AA long hypoth 99.9 7.2E-28 2.5E-32 234.1 -10.9 323 58-432 12-348 (354)
35 2gre_A Deblocking aminopeptida 99.9 1.7E-22 5.8E-27 197.5 20.0 239 55-429 6-343 (349)
36 1y0y_A FRV operon protein FRVX 99.9 3.9E-22 1.3E-26 195.3 21.1 247 57-433 8-350 (353)
37 1vho_A Endoglucanase; structur 99.9 1.1E-21 3.7E-26 191.8 18.6 246 56-434 6-337 (346)
38 3cpx_A Aminopeptidase, M42 fam 99.9 9.7E-22 3.3E-26 189.6 13.0 237 54-430 16-320 (321)
39 1ylo_A Hypothetical protein SF 99.9 2.8E-20 9.7E-25 181.8 22.4 250 59-433 7-338 (348)
40 1tkj_A Aminopeptidase, SGAP; d 99.8 2.4E-18 8.1E-23 163.1 21.2 119 55-190 7-144 (284)
41 3kl9_A PEPA, glutamyl aminopep 99.7 1.3E-16 4.5E-21 154.8 22.4 246 56-432 4-345 (355)
42 1rtq_A Bacterial leucyl aminop 99.7 9.6E-17 3.3E-21 153.2 15.4 140 41-190 7-164 (299)
43 2vpu_A TET3, 354AA long hypoth 99.7 4.6E-15 1.6E-19 143.8 19.8 244 57-432 11-348 (354)
44 3tc8_A Leucine aminopeptidase; 99.6 5.7E-15 1.9E-19 140.9 16.4 130 55-190 25-185 (309)
45 3isx_A Endoglucanase; TM1050, 99.6 2.3E-14 8E-19 137.9 19.5 244 55-428 11-341 (343)
46 3gux_A Putative Zn-dependent e 99.6 1.7E-14 5.7E-19 137.7 15.2 130 55-190 27-188 (314)
47 2afw_A Glutaminyl-peptide cycl 99.5 5.7E-14 2E-18 135.6 12.8 126 55-190 31-190 (329)
48 4fuu_A Leucine aminopeptidase; 99.2 1.8E-10 6.2E-15 110.0 16.2 130 55-190 25-186 (309)
49 3pb6_X Glutaminyl-peptide cycl 99.2 6.8E-11 2.3E-15 113.2 11.2 124 55-190 39-194 (330)
50 4f9u_A CG32412; alpha/beta hyd 99.1 2.8E-10 9.4E-15 109.0 13.1 122 57-191 13-164 (312)
51 1q7l_B Aminoacylase-1; catalys 99.1 9E-11 3.1E-15 90.1 6.4 79 348-434 2-81 (88)
52 4fai_A CG5976, isoform B; alph 99.1 1.9E-09 6.5E-14 103.7 16.4 135 41-190 25-187 (330)
53 3iib_A Peptidase M28; YP_92679 99.0 5.3E-09 1.8E-13 104.8 17.1 100 75-191 203-317 (444)
54 2ek8_A Aminopeptidase; metallo 98.7 4.6E-08 1.6E-12 97.4 10.0 106 65-190 162-285 (421)
55 3fed_A Glutamate carboxypeptid 98.0 8.1E-06 2.8E-10 85.5 8.4 78 98-191 312-395 (707)
56 3kas_A Transferrin receptor pr 98.0 1.9E-05 6.4E-10 81.9 10.0 78 98-191 266-350 (640)
57 2glf_A Probable M18-family ami 94.6 0.047 1.6E-06 54.0 6.5 77 345-430 368-449 (450)
58 3vat_A Dnpep, aspartyl aminope 94.3 0.079 2.7E-06 52.8 7.3 80 345-433 404-488 (496)
59 2ijz_A Probable M18-family ami 93.9 0.029 1E-06 55.2 3.2 76 345-429 343-423 (428)
60 3k9t_A Putative peptidase; str 92.3 0.93 3.2E-05 43.9 10.9 70 100-191 167-238 (435)
61 1y7e_A Probable M18-family ami 92.1 0.08 2.7E-06 52.5 3.4 75 345-428 377-456 (458)
62 4eme_A M18 aspartyl aminopepti 92.0 0.27 9.1E-06 49.6 6.9 81 345-433 472-562 (571)
63 2hc9_A Leucine aminopeptidase 91.0 4.8 0.00016 39.8 14.5 113 55-179 167-307 (491)
64 3h8g_F Cytosol aminopeptidase; 90.1 5.2 0.00018 39.6 13.9 121 47-179 172-322 (497)
65 1gyt_A Cytosol aminopeptidase; 89.8 5.8 0.0002 39.5 14.2 115 53-179 179-325 (503)
66 3ij3_A Cytosol aminopeptidase; 87.8 3.4 0.00012 40.5 10.6 118 55-179 167-305 (482)
67 1lam_A Leucine aminopeptidase; 87.6 7.4 0.00025 38.5 13.1 120 55-179 161-305 (484)
68 3jru_B Probable cytosol aminop 87.4 7.7 0.00026 38.3 13.0 114 54-179 175-317 (490)
69 3kzw_A Cytosol aminopeptidase; 87.4 6.5 0.00022 38.9 12.5 112 54-179 196-338 (515)
70 3kr4_A M17 leucyl aminopeptida 87.2 14 0.00046 36.7 14.5 116 53-179 203-349 (528)
71 3pei_A Cytosol aminopeptidase; 86.8 7 0.00024 38.6 12.3 113 55-179 164-306 (486)
72 2glj_A Probable M18-family ami 86.5 0.31 1.1E-05 48.3 2.7 75 345-428 380-459 (461)
73 4efd_A Aminopeptidase; structu 84.7 7.6 0.00026 38.4 11.4 111 55-179 204-345 (522)
74 2ijz_A Probable M18-family ami 81.5 0.44 1.5E-05 46.8 1.2 62 61-122 5-85 (428)
75 1rtq_A Bacterial leucyl aminop 80.4 7.7 0.00026 35.7 9.5 85 346-434 198-289 (299)
76 1y7e_A Probable M18-family ami 78.7 1.4 4.7E-05 43.6 3.8 57 64-122 25-99 (458)
77 2glf_A Probable M18-family ami 76.0 4 0.00014 40.1 6.2 53 70-122 29-96 (450)
78 3fed_A Glutamate carboxypeptid 71.8 7.1 0.00024 40.8 7.2 52 39-94 13-67 (707)
79 4f9u_A CG32412; alpha/beta hyd 71.0 6.9 0.00023 36.3 6.3 60 373-438 241-304 (312)
80 2ek8_A Aminopeptidase; metallo 68.5 18 0.00061 35.1 9.0 72 353-434 327-402 (421)
81 2jvf_A De novo protein M7; tet 62.8 35 0.0012 23.6 7.0 63 290-365 15-80 (96)
82 3mru_A Aminoacyl-histidine dip 58.2 17 0.00058 36.1 6.7 47 271-323 347-393 (490)
83 4fai_A CG5976, isoform B; alph 52.0 16 0.00055 34.2 5.1 57 374-436 267-327 (330)
84 3pb6_X Glutaminyl-peptide cycl 48.7 25 0.00084 32.9 5.7 56 372-433 270-329 (330)
85 2glj_A Probable M18-family ami 47.6 11 0.00038 37.2 3.2 35 147-185 264-299 (461)
86 3tc8_A Leucine aminopeptidase; 46.0 60 0.002 29.9 7.9 80 349-430 222-308 (309)
87 2afw_A Glutaminyl-peptide cycl 37.0 35 0.0012 31.7 4.8 53 375-433 272-328 (329)
88 3iib_A Peptidase M28; YP_92679 35.1 47 0.0016 32.4 5.6 82 349-437 351-436 (444)
89 3kas_A Transferrin receptor pr 27.9 48 0.0016 34.1 4.4 49 40-92 7-60 (640)
90 4fuu_A Leucine aminopeptidase; 27.0 1.6E+02 0.0055 26.8 7.5 79 348-429 222-306 (309)
No 1
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=8.4e-63 Score=495.90 Aligned_cols=395 Identities=65% Similarity=1.066 Sum_probs=320.1
Q ss_pred hhHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeec
Q 013076 40 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADM 119 (450)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~ 119 (450)
..+++.+++++++.++++++++++|++|||+|++|.++++||.++|+++|++++...+.+|+++++++++.|+|+|+|||
T Consensus 13 ~~~~i~~~~~~~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~~~i~l~aH~ 92 (418)
T 1xmb_A 13 IQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADM 92 (418)
T ss_dssp ---CHHHHHHSHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEEC
T ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCCCEEEEEecc
Confidence 34457777777422278999999999999999999999999999999999998875557899999976422899999999
Q ss_pred cCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCccchHHHHHcccccccceE
Q 013076 120 DSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAI 199 (450)
Q Consensus 120 DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~~Ga~~l~~~~~~~~~d~~ 199 (450)
||||+++...|||.++.||++||||+|++++++|+|+++|++.+.+++++|+|+|+++||++.|++++++++.++++|++
T Consensus 93 D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EEg~~G~~~~~~~g~~~~~d~~ 172 (418)
T 1xmb_A 93 DALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAI 172 (418)
T ss_dssp CCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEE
T ss_pred cccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEeccccccccHHHHHHcCCcCCCCEE
Confidence 99999887788999888999999999999999999999999988789999999999999977899999998876668999
Q ss_pred EEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEE
Q 013076 200 FGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKF 279 (450)
Q Consensus 200 i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i 279 (450)
+++|.+++.|+|.+....+..++|..+++|+++|+++|+|.|+.|+|||..+++++.+|+.+..+..++...++++++.|
T Consensus 173 i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t~~vg~i 252 (418)
T 1xmb_A 173 FGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKV 252 (418)
T ss_dssp EEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEEEEEEEE
T ss_pred EEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEE
Confidence 99887666677776556666788999999999999999999999999999999999999988655545555679999999
Q ss_pred ecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHh
Q 013076 280 QGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGD 359 (450)
Q Consensus 280 ~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 359 (450)
+||.+.|+||++|++.+|+|+.| +.+++.++|+++++..+..+++++++++.....+++|++.+|+++++.+++++++
T Consensus 253 ~gG~~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~~g~~~~~~~~~~~~~p~~~~~~d~~l~~~~~~~~~~ 330 (418)
T 1xmb_A 253 NGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRD 330 (418)
T ss_dssp C--------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHHTTEEEEEESSGGGCCCBCCEEECHHHHHHHHHHHHH
T ss_pred EecCcCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHHhCCeEEEEEccCCcccCCCccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999 8999999999999988878888888876211012367777899999999999999
Q ss_pred hcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhhcCC
Q 013076 360 MLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEFGP 437 (450)
Q Consensus 360 ~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~~~ 437 (450)
++|.+++..+...+|++|+++|.+.+|++++++|+.... +....+|++||+++++++.+++++|+.++.++++.++.
T Consensus 331 ~~g~~~~~~~~~~~g~tD~~~~~~~~P~~~~~~G~~~~~-~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~~~ 407 (418)
T 1xmb_A 331 LLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKAS 407 (418)
T ss_dssp HHCGGGEEECCCBCCCCTHHHHHTTSCEEEEEEEEECTT-CCSCCTTCTTCCCCGGGHHHHHHHHHHHHHHHHHHHHC
T ss_pred hcCCcceeccCCCCCcchHHHHHHHCCEEEEEEeCCCCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 778764322457889999999988899987778876421 22467999999999999999999999999999986555
No 2
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.1e-60 Score=478.52 Aligned_cols=368 Identities=42% Similarity=0.700 Sum_probs=310.0
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecc-cCCceEEEEEcCC-CCceEEEEeeccCCCCcCcCCCcc
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP-VAVTGVVGFIGTG-EPPFVALRADMDSLPLQEMVEWEY 132 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~~nvva~~~~~-~~~~ill~~H~DvVp~~~~~~w~~ 132 (450)
+++++++++|++|||+|++|.++++||.++|+++|++++.. .+++|++++++++ ++|+|+|+|||||||+++...+||
T Consensus 32 ~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~~~~i~l~~H~D~vp~~~~~~~Pf 111 (404)
T 1ysj_A 32 TRLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQTNLPF 111 (404)
T ss_dssp HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSCCCEEEEEEECCCBSCCCCCCCTT
T ss_pred HHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCCCCEEEEEEecccccCCCCCCCCc
Confidence 78999999999999999999999999999999999998653 3467999999654 468999999999999987555678
Q ss_pred ccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCccchHHHHHcccccccceEEEeccCCCCCCce
Q 013076 133 KSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGE 212 (450)
Q Consensus 133 ~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~ 212 (450)
....||++||||+|++++++|+|+++|++.+.+++++|+|+|+++||++.|++++++++.++++|+++++|.+|+.+.|.
T Consensus 112 ~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~G~~~~~~~g~~~~~d~~i~~h~ep~~~~g~ 191 (404)
T 1ysj_A 112 ASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLPVGT 191 (404)
T ss_dssp CCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTTTCHHHHHHHTTTTTTEEEEEEEEEETTSCTTE
T ss_pred ccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEecccccchhHHHHHhcCCCcCCCEEEEEecCCCCCCce
Confidence 87778999999999999999999999999877899999999999999878999999988766789999988777767777
Q ss_pred EEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeE
Q 013076 213 VASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSV 292 (450)
Q Consensus 213 ~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a 292 (450)
+....|..++|..+++|+++|+++|++.|+.|.|||..+++++.+|+++..+..++...++++++.|+||.+.|+||++|
T Consensus 192 v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~a 271 (404)
T 1ysj_A 192 IGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAVVSITRVQAGTSWNVIPDQA 271 (404)
T ss_dssp EEECSEEEECCEEEEEEEEECC--------CCCCHHHHHHHHHHHHC-----------CCEEEEEEEEECSCSSSCCSEE
T ss_pred EEeccChhhcccceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCCCCcEEEEEEEEcCCCCceecCce
Confidence 66665655679999999999999999999999999999999999998875554455567899999999999999999999
Q ss_pred EEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhh-cCCccccccCC
Q 013076 293 LIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDM-LDTQKVKVMAP 371 (450)
Q Consensus 293 ~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~g~~~~~~~~~ 371 (450)
++.+|+|++|.++.+++.++|+++++..+..+++++++++ ...+|++.+|+++++.++++++++ +|.++. . .
T Consensus 272 ~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~g~g~~~~--~-~ 344 (404)
T 1ysj_A 272 EMEGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQAEFKW----FPYLPSVQNDGTFLNAASEAAARLGYQTVHA--E-Q 344 (404)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE----EEEECCEEECGGGHHHHHHHHHHTTCEEEEC--C-C
T ss_pred EEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEE----ecCCCCccCCHHHHHHHHHHHHHhcCCcccc--c-c
Confidence 9999999999999999999999999988878888888876 345667777888999999999998 776653 3 6
Q ss_pred CcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhh
Q 013076 372 VMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLE 434 (450)
Q Consensus 372 ~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 434 (450)
.+|++|+++|.+.+|++++++||.. ...+|++||+++++++.+++++|+.++.+++++
T Consensus 345 ~~g~tD~~~~~~~~p~~~~~~G~~~-----~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~~ 402 (404)
T 1ysj_A 345 SPGGEDFALYQEKIPGFFVWMGTNG-----TEEWHHPAFTLDEEALTVASQYFAELAVIVLET 402 (404)
T ss_dssp BSSCCTHHHHHTTSCEEEEEEECCC-----SSCTTCTTCCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHCCeEEEEEcCCC-----CCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 7899999999988998877888653 356999999999999999999999999999864
No 3
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=2.9e-60 Score=480.65 Aligned_cols=381 Identities=27% Similarity=0.419 Sum_probs=304.1
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceeccc-------------------------
Q 013076 42 KKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV------------------------- 96 (450)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~------------------------- 96 (450)
.++.+++++.+ +++++++++|+++|+++++|.++++||.++|+++||++++..
T Consensus 3 ~~~~~~~~~~~--~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (445)
T 3io1_A 3 LQLDEYLRQLA--PSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAR 80 (445)
T ss_dssp CCHHHHHHTTH--HHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHH
T ss_pred chHHHHHHHHH--HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhc
Confidence 34677888877 999999999999999999999999999999999999987531
Q ss_pred --------------CCceEEEEEcCC-CCceEEEEeeccCCCCcCcCCCccc-------cCCCCceecccchHHHHHHHH
Q 013076 97 --------------AVTGVVGFIGTG-EPPFVALRADMDSLPLQEMVEWEYK-------SKIPGKMHACGHDGHVTMLLG 154 (450)
Q Consensus 97 --------------~~~nvva~~~~~-~~~~ill~~H~DvVp~~~~~~w~~~-------~~~~g~l~GrG~kg~~a~~l~ 154 (450)
+++||+|+++++ ++|+|+|++||||||+++..+|+++ +..+|++||||+|++++++|+
T Consensus 81 ~~g~~~~~~~~~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~ 160 (445)
T 3io1_A 81 EQGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLG 160 (445)
T ss_dssp TTTCCTTTGGGGTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHH
T ss_pred cccccccccccccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHH
Confidence 568999999765 4799999999999999888889533 456899999999999999999
Q ss_pred HHHHHHhccccCCceEEEEEecCCCCccchHHHHHcccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEec
Q 013076 155 AAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGK 234 (450)
Q Consensus 155 a~~~l~~~~~~~~~~i~~~~~~dEEg~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~ 234 (450)
|+++|++.+.+++++|+|+|+++||++.|++.|+++|.++++|+++++|+++..|.|.+.+..+... +..+++|+++|+
T Consensus 161 aa~~L~~~~~~~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g~~-a~~~~~i~v~Gk 239 (445)
T 3io1_A 161 LAHVLKQYAAQLNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNFM-ATTKFDVQFSGV 239 (445)
T ss_dssp HHHHHHHTGGGCCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCCBC-EEEEEEEEEECC
T ss_pred HHHHHHhCcCcCCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCCee-EEEEEEEEEEee
Confidence 9999999888899999999999999889999999999888899999998766566777665432211 247999999999
Q ss_pred CCCC-CCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHH
Q 013076 235 GGHA-AIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRI 313 (450)
Q Consensus 235 ~~Hs-s~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i 313 (450)
++|+ +.|+.|+|||..+++++..|+.+. +..+ ...+++++.|+||.+.|+||++|++.+|+|+.+.++.+++.++|
T Consensus 240 ~~HaGs~P~~g~nAi~~aa~~i~~l~~l~-~~~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i 316 (445)
T 3io1_A 240 AAHAGGKPEDGRNALLAAAQAALGLHAIP-PHSA--GASRVNVGVMQAGTGRNVVPSSALLKVETRGESEAINQYVFERA 316 (445)
T ss_dssp CSSTTCCGGGCCCHHHHHHHHHHHHHTCC-CBTT--BCEEEEEEEEEECSCTTSCCCEEEEEEEEEESSHHHHHHHHHHH
T ss_pred cCCCCCCCcCCcCHHHHHHHHHHHHHHHH-hhcC--CCeEEEEEEEecCCCCceeCCeEEEEEEEecCCHHHHHHHHHHH
Confidence 9998 699999999999999999999874 2222 35789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCcccccc-CCCcccchHHHHhhhcC-----e
Q 013076 314 EEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVM-APVMGSEDFSFYQEVMP-----G 387 (450)
Q Consensus 314 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~-~~~~g~tD~~~~~~~~p-----~ 387 (450)
+++++..+..+++++++++ ...+|+..+|+++++.+++++++++|.+++... ...+|++|+++|.+.+| .
T Consensus 317 ~~~~~~~a~~~g~~~~i~~----~~~~~~~~~d~~l~~~~~~a~~~~~g~~~v~~~~~~~~g~~D~~~~~~~~P~~gg~~ 392 (445)
T 3io1_A 317 QHVVAGAAAMYEARYELRM----MGAATASAPSPAWVDYLREQAARVPGVQQAVDRIAAPAGSEDATLMMARVQARGGLA 392 (445)
T ss_dssp HHHHHHHHHHTTCEEEEEE----EEEECCCCCCHHHHHHHHHHHHHSTTCCBCBSSCCCCCBCCTHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHhCCeEEEEE----ecCCCCcCCCHHHHHHHHHHHHHhcCCccceecCCCCccHHHHHHHHHHhcccCCce
Confidence 9999999888999998887 445677788999999999999998776543222 23589999999998876 5
Q ss_pred EEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhhcCC
Q 013076 388 YFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEFGP 437 (450)
Q Consensus 388 ~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~~~ 437 (450)
+++++|+.. ...+|++||++++++|..++++|+.++.+++..++-
T Consensus 393 ~~~~~G~~~-----~~~~H~~~E~i~~~~l~~g~~~~~~~~~~~~~~~~~ 437 (445)
T 3io1_A 393 SYMIFGTEL-----SAGHHNEKFDFDESVMAVAVETLARVALNFPWQRGV 437 (445)
T ss_dssp EEEEEEEEC----------------CCCHHHHHHHHHHHHHHTCCSCC--
T ss_pred EEEEEeCCC-----CCCCCCCCCcCCHHHHHHHHHHHHHHHHHHhhccCC
Confidence 677888653 356999999999999999999999999999876543
No 4
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=5.7e-55 Score=441.37 Aligned_cols=370 Identities=15% Similarity=0.168 Sum_probs=308.7
Q ss_pred hhHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecc---------------------cCC
Q 013076 40 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP---------------------VAV 98 (450)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~---------------------~~~ 98 (450)
..+++.+++++++ +++++++++|++|||+|++|.++++||+++|+++|+++++. +++
T Consensus 13 ~~~~i~~~i~~~~--~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (433)
T 3pfo_A 13 ITQSLRAAVDRNF--NDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGS 90 (433)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGC
T ss_pred HHHHHHHHHHhhH--HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCC
Confidence 5678999999988 99999999999999999999999999999999999998641 356
Q ss_pred ceEEEEEcCC-CCceEEEEeeccCCCCcCcCCCc---ccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceE
Q 013076 99 TGVVGFIGTG-EPPFVALRADMDSLPLQEMVEWE---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTV 170 (450)
Q Consensus 99 ~nvva~~~~~-~~~~ill~~H~DvVp~~~~~~w~---~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i 170 (450)
+||+|+++++ ++|+|+|+|||||||+++.+.|. |.+ +++|++||||+ |++++++|+|+++|++.+.+++++|
T Consensus 91 ~~via~~~g~~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~v 170 (433)
T 3pfo_A 91 MQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDARV 170 (433)
T ss_dssp EEEEEEECCCCCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSCE
T ss_pred cEEEEEEecCCCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCccE
Confidence 8999999754 46899999999999998877884 553 56899999998 8999999999999999887889999
Q ss_pred EEEEecCCC-CccchHHHHHcccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHH
Q 013076 171 VLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPIL 249 (450)
Q Consensus 171 ~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~ 249 (450)
.|+|+++|| ++.|++.+++++. ++|+++..+ |.. ..+. ..++|..+++|+++|+++|+|.|+.|+||+.
T Consensus 171 ~~~~~~~EE~g~~G~~~~~~~~~--~~d~~i~~e--p~~--~~i~----~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~ 240 (433)
T 3pfo_A 171 HVQTVTEEESTGNGALSTLMRGY--RADACLIPE--PTG--HTLT----RAQVGAVWFRLRVRGTPVHVAYSETGTSAIL 240 (433)
T ss_dssp EEEEESCTTTTCHHHHHHHHTTC--CCSEEEECC--CCS--SCEE----EEECEEEEEEEEEECCCCBGGGGGGSCCHHH
T ss_pred EEEEEecCccCChhHHHHHhcCC--CCCEEEEeC--CCC--CceE----EecceEEEEEEEEEcCCCccCCCCcCcCHHH
Confidence 999999999 6789999998764 578887643 321 1232 2357999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhccc-----CCC-----CCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 013076 250 AASNVIVSLQHLVSRE-----ADP-----LDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIG 319 (450)
Q Consensus 250 ~~~~~l~~l~~~~~~~-----~~~-----~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~ 319 (450)
.+++++..|+.+..+. .++ ....+++++.|+||.+.|+||++|++.+++|++|+++.+++.++|+++++.
T Consensus 241 ~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~ 320 (433)
T 3pfo_A 241 SAMHLIRAFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGGDWASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLAD 320 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEECSCTTBCCCEEEEEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccccCccccccCCCceEEeeeEECCCCCcccCcEEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 9999999998875321 122 234689999999999999999999999999999999999999999999998
Q ss_pred HHHhh----CCeEEEEeeccCCCCCCCcc--CChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh--cCeEEEE
Q 013076 320 QAAVQ----RCSATVDFLSKEKPFFPPTI--NNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV--MPGYFFF 391 (450)
Q Consensus 320 ~~~~~----~~~~~i~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--~p~~~~~ 391 (450)
.+..+ ++++++++.. ..+|++. .|+++++.+.+++++.+|.++. ...++|++|+++|.+. +|+++
T Consensus 321 ~~~~~~~~~~~~~~v~~~~---~~~p~~~~~~d~~~~~~~~~a~~~~~G~~~~--~~~~~g~~D~~~~~~~~giP~v~-- 393 (433)
T 3pfo_A 321 AQATDSFLSENPAELVWSG---FQADPAVCEPGGVAEDVLTAAHKAAFNAPLD--ARLSTAVNDTRYYSVDYGIPALC-- 393 (433)
T ss_dssp HHTTCHHHHHSCCEEEEEE---EEECCEECCTTCHHHHHHHHHHHHHHSSCCC--EEEESSCCTHHHHHHTTCCCEEE--
T ss_pred HhhhCcccccCCeEEEEec---ccCCcccCCCCCHHHHHHHHHHHHHhCCCCc--eeeeeeeccHHHHHhhCCCCEEE--
Confidence 76543 2445555421 2234443 4778999999999997788653 3567899999999874 99764
Q ss_pred ecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhh
Q 013076 392 LGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLE 434 (450)
Q Consensus 392 ~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 434 (450)
|||+. ..+|++||+++++++..++++|+.++.++++.
T Consensus 394 ~Gp~~------~~~H~~~E~i~~~~l~~~~~~~~~~i~~~~~~ 430 (433)
T 3pfo_A 394 YGPYG------QGPHAFDERIDLESLRKTTLSIALFVAEWCGL 430 (433)
T ss_dssp CCCCE------ECTTSTTCEEEHHHHHHHHHHHHHHHHHHHCE
T ss_pred ECCCC------ccCCCCCceEEHHHHHHHHHHHHHHHHHHhcc
Confidence 67542 56999999999999999999999999999864
No 5
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=5e-54 Score=428.95 Aligned_cols=365 Identities=17% Similarity=0.189 Sum_probs=304.9
Q ss_pred hhHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcch---HHHHHHHHHHHHhcCCceeccc-----CCceEEEEEcCCCCc
Q 013076 40 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQE---FETSQLIRSELDKMGIKYKHPV-----AVTGVVGFIGTGEPP 111 (450)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e---~~~~~~l~~~l~~~G~~~~~~~-----~~~nvva~~~~~~~~ 111 (450)
..+++.++++.+. +++++++++|++|||+|++| .++++||+++|+++|++++... .++|++++++++.+|
T Consensus 6 ~~~~~~~~~~~~~--~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~~~ 83 (393)
T 1cg2_A 6 RDNVLFQAATDEQ--PAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRGGK 83 (393)
T ss_dssp CCHHHHHHHHHHH--HHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSSCC
T ss_pred hhhHHHHHHHhhH--HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCCCc
Confidence 4678899999988 99999999999999999876 6799999999999999987643 246999999754348
Q ss_pred eEEEEeeccCCCCc-CcCCCccccCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHH
Q 013076 112 FVALRADMDSLPLQ-EMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHK 186 (450)
Q Consensus 112 ~ill~~H~DvVp~~-~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~ 186 (450)
+|+|++||||||.. +...|||. .+||++||||+ |++++++|+|+++|++.+.+++++|+|+|+++|| ++.|++.
T Consensus 84 ~i~l~aH~D~vp~~~~~~~~Pf~-~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~G~~~ 162 (393)
T 1cg2_A 84 NLLLMSHMDTVYLKGILAKAPFR-VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRD 162 (393)
T ss_dssp CEEEEEECCBSCCTTHHHHSCCE-EETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTTHH
T ss_pred eEEEEEecCcCCCCCccccCCee-eeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccccCCccHHH
Confidence 99999999999864 33457888 56899999996 7999999999999999887788899999999999 6689999
Q ss_pred HHHcccccccceEEEeccCCCC-CCceEEeecCcccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHhhhhcc
Q 013076 187 VLEAGVLEKVNAIFGLHVDPNL-PIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQHSIDPILAASNVIVSLQHLVSR 264 (450)
Q Consensus 187 l~~~~~~~~~d~~i~~~~~~~~-~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~~g~nAi~~~~~~l~~l~~~~~~ 264 (450)
+++++. .++|+++++++ +. +.+.+.. .++|..+++|+++|+++|+| .|+.|.|||..+++++.+|+.+..
T Consensus 163 ~~~~~~-~~~d~~i~~e~--~~~~~~~i~~----~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~~~- 234 (393)
T 1cg2_A 163 LIQEEA-KLADYVLSFEP--TSAGDEKLSL----GTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDD- 234 (393)
T ss_dssp HHHHHH-HHCSEEEECCC--EETTSCEEES----EECEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGCB-
T ss_pred HHHHHh-hcCCEEEEeCC--CCCCCCcEEE----eeeeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhhhC-
Confidence 988643 35788887643 22 3344322 35699999999999999997 799999999999999999988753
Q ss_pred cCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCcc
Q 013076 265 EADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTI 344 (450)
Q Consensus 265 ~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 344 (450)
+...++++++.|+||.+.|+||++|++.+|+|+++.++.+++.++|+++++.. ...++++++++ ...+|++.
T Consensus 235 ---~~~~~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~-~~~~~~~~~~~----~~~~~~~~ 306 (393)
T 1cg2_A 235 ---KAKNLRFNWTIAKAGNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQK-KLPEADVKVIV----TRGRPAFN 306 (393)
T ss_dssp ---TTTTEEEEEEEEEECSSTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHTSC-SSTTCEEEEEE----EECSCCEE
T ss_pred ---cccCceEEEEEEeCCCCCCEECcccEEEEEEeeCChhhHHHHHHHHHHHHhcc-cCCCcEEEEEe----ccccCCcc
Confidence 23567999999999999999999999999999999999999999999998762 34577777776 34566664
Q ss_pred C---ChHHHHHHHHHHHhhcCCccccccCC-CcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCC-CCcccCCCccH
Q 013076 345 N---NNDLHKYFQTVAGDMLDTQKVKVMAP-VMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHS-PYFTLNEDALP 418 (450)
Q Consensus 345 ~---d~~~~~~~~~~~~~~~g~~~~~~~~~-~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~-~~E~i~~~~l~ 418 (450)
+ ++++++.+++++++. |.++ .+.. .+|++|+++|... +|++ ++||+.. ..+|+ +||+++++++.
T Consensus 307 ~~~~~~~l~~~~~~~~~~~-g~~~--~~~~~~~g~tD~~~~~~~giP~~-~~~G~~~------~~~H~~~~E~i~~~~l~ 376 (393)
T 1cg2_A 307 AGEGGKKLVDKAVAYYKEA-GGTL--GVEERTGGGTDAAYAALSGKPVI-ESLGLPG------FGYHSDKAEYVDISAIP 376 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHT-TCCC--EEESCBSCCCTHHHHGGGSCCEE-CCCSCEE------ECTTSSSCCEEEGGGHH
T ss_pred CCcchHHHHHHHHHHHHHh-CCCC--ccccCCCcccHHHHHHhCCCCEE-EeCCCCC------CCccCCCcceEEehhHH
Confidence 4 367999999999865 8765 3446 7899999999988 8986 3677642 45999 99999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 013076 419 YGAALHASLALRYLL 433 (450)
Q Consensus 419 ~~~~~~~~~~~~l~~ 433 (450)
+++++|..++.++++
T Consensus 377 ~~~~~~~~~~~~l~~ 391 (393)
T 1cg2_A 377 RRLYMAARLIMDLGA 391 (393)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999875
No 6
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=1.6e-53 Score=424.54 Aligned_cols=360 Identities=23% Similarity=0.311 Sum_probs=310.4
Q ss_pred hhHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccC--CceEEEEEcCC-CCceEEEE
Q 013076 40 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVA--VTGVVGFIGTG-EPPFVALR 116 (450)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~--~~nvva~~~~~-~~~~ill~ 116 (450)
.++++.+++++++ +++++++++|++|||+|++|.++++||.++|+++||++++... ++||+|+++++ ++|+|+|.
T Consensus 3 ~~~~i~~~~~~~~--~~~~~~~~~l~~~pe~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~g~~i~l~ 80 (394)
T 3ram_A 3 EKQQILDYIETNK--YSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFL 80 (394)
T ss_dssp HHHHHHHHHHHTH--HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSSCEEEEE
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCCCCEEEEE
Confidence 4567889999988 9999999999999999999999999999999999999876433 56999999765 46999999
Q ss_pred eeccCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC--ccchH-HHHHcccc
Q 013076 117 ADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG--GGGAH-KVLEAGVL 193 (450)
Q Consensus 117 ~H~DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg--~~Ga~-~l~~~~~~ 193 (450)
+|||||| |++||||+|+..+++|+|+++|++.+..++++|.|+|+++||+ ..|++ .|++.|.+
T Consensus 81 ah~D~vp--------------g~~ha~G~d~~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~g~~ 146 (394)
T 3ram_A 81 AEYDALP--------------GLGHACGHNIIGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVI 146 (394)
T ss_dssp ECCCCCT--------------TTSSTTCHHHHHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHHTGG
T ss_pred EecccCC--------------CcceECCccHHHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHcCCc
Confidence 9999999 5679999999999999999999988778999999999999994 37999 99999888
Q ss_pred cccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCc
Q 013076 194 EKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQHSIDPILAASNVIVSLQHLVSREADPLDSQ 272 (450)
Q Consensus 194 ~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~ 272 (450)
+++|+++++|+++.. ..+..++|..+++|+++|+++|+| .|+.|+|||..+++++..|+.+.... ...+
T Consensus 147 ~~~d~~~~~h~~~~~-------~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~~---~~~~ 216 (394)
T 3ram_A 147 DQIDIALMIHPGNET-------YKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHI---KKDQ 216 (394)
T ss_dssp GGCSEEECCEEESSB-------BCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHHGGGS---CTTC
T ss_pred ccCCEEEEECCcccc-------CCCccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHHHhhC---CCCC
Confidence 789999998875431 233456799999999999999999 99999999999999999999875322 1235
Q ss_pred eEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHH
Q 013076 273 VVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKY 352 (450)
Q Consensus 273 t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~ 352 (450)
+++++.++||.+.|+||++|++.+++|+.+.++.+++.++|+++++..+..+++++++++. ...+|+..+|+++++.
T Consensus 217 ~~~~~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~ei~~~---~~~~~~~~~d~~l~~~ 293 (394)
T 3ram_A 217 RVHGVILDGGKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPI---QNGVNEFIKTPKLDDL 293 (394)
T ss_dssp EEEEEEEEBCSCTTBCCSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEES---SCCBCCCCCCHHHHHH
T ss_pred eeEEEEEECCCCCceeCCeEEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe---cCCCCCccCCHHHHHH
Confidence 7888899999999999999999999999999999999999999999998889999988762 3567778889999999
Q ss_pred HHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcc-------cCCCccHHHHHHHH
Q 013076 353 FQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFT-------LNEDALPYGAALHA 425 (450)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~-------i~~~~l~~~~~~~~ 425 (450)
++++++++ | .++.....++|++|+++|.+.+|++++++|.+.. ....|+| |+ ++.+.+..++++++
T Consensus 294 ~~~a~~~~-G-~~~~~~~~~~g~~D~~~~~~~~P~~~~~~g~~~~----~~~~H~~-ef~~~~~~~~~~~~l~~g~~~la 366 (394)
T 3ram_A 294 FAKYAEEV-G-EAVIDDDFGYGSTDTGNVSHVVPTIHPHIKIGSR----NLVGHTH-RFREAAASVHGDEALIKGAKIMA 366 (394)
T ss_dssp HHHHHHHT-T-CCBCCSCCCCBCCTHHHHTTTSCBCCCEEECSCT----TCCTTSH-HHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh-C-cccccCCCCcccccHHHHHHHhchheEEeeecCC----CCCCCCH-HHHhccCCCccHHHHHHHHHHHH
Confidence 99999985 8 4432245688999999999889998877776531 2468999 66 58999999999999
Q ss_pred HHHHHHHhhc
Q 013076 426 SLALRYLLEF 435 (450)
Q Consensus 426 ~~~~~l~~~~ 435 (450)
.++.++++.+
T Consensus 367 ~~~~~~l~~~ 376 (394)
T 3ram_A 367 LMGLELITNQ 376 (394)
T ss_dssp HHHHHHHHCH
T ss_pred HHHHHHhcCH
Confidence 9999998754
No 7
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=9.4e-53 Score=417.57 Aligned_cols=359 Identities=18% Similarity=0.241 Sum_probs=286.4
Q ss_pred HHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecc--cCCceEEEEEcCCCCceEEEEeeccCCCCcCcCCCc
Q 013076 54 VGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP--VAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWE 131 (450)
Q Consensus 54 ~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~ 131 (450)
.+++++++++|++|||+|++|.++++||+++|+++|++++.. ++.+|++|+++ .++|+|+|++||||||.++.+.|.
T Consensus 2 ~~~~~~~~~~L~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~g-~~~~~i~l~aH~D~vp~~~~~~w~ 80 (377)
T 3isz_A 2 KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHG-TSEPVIAFAGHTDVVPTGDENQWS 80 (377)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEEE-SSSCEEEEEEECCBCCCCCGGGCS
T ss_pred chHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEeC-CCCCEEEEeccccccCCCCcccCC
Confidence 377899999999999999999999999999999999998752 35689999984 346999999999999998777785
Q ss_pred ---cccC-CCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-c-cchHHHHHcccc--cccceEE
Q 013076 132 ---YKSK-IPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG-G-GGAHKVLEAGVL--EKVNAIF 200 (450)
Q Consensus 132 ---~~~~-~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg-~-~Ga~~l~~~~~~--~~~d~~i 200 (450)
|.+. +||++||||+ |++++++|.+++.+++.+.+++++|+|+|+++||+ + .|++.+++.... ..+|+++
T Consensus 81 ~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~ 160 (377)
T 3isz_A 81 SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM 160 (377)
T ss_dssp SCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccCccccHHHHHHHHHhcCCCCCEEE
Confidence 5544 5899999998 79999999999999887778899999999999994 4 699998875322 2468777
Q ss_pred EeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhccc-CCCCCCceEEEEEE
Q 013076 201 GLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRE-ADPLDSQVVTVAKF 279 (450)
Q Consensus 201 ~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~-~~~~~~~t~~i~~i 279 (450)
..++....+.+... . ...+|..+++|+++|+++|++.|+.|+||+..+++++.+|+++..+. ......++++++.|
T Consensus 161 ~~e~~~~~~~g~~i-~--~g~~g~~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~v~~i 237 (377)
T 3isz_A 161 VGEPSSAKNLGDVV-K--NGRRGSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANI 237 (377)
T ss_dssp ECCCCBSSSTTSEE-E--EEECEEEEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCCCCCCSSSCCCEEEEEEE
T ss_pred EcCCCCcccCCceE-E--EEcceEEEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhccccccccccCCceeEEEEE
Confidence 65443322333221 1 12468999999999999999999999999999999999998864332 22346789999999
Q ss_pred ecCC-CCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHH
Q 013076 280 QGGG-AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAG 358 (450)
Q Consensus 280 ~gG~-~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 358 (450)
+||. +.|+||++|++.+|+|+++.++.+++.++++++++. +++++++++. ....|...+|+++++.++++++
T Consensus 238 ~gg~~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~~~~----~g~~~~i~~~---~~~~p~~~~~~~l~~~l~~a~~ 310 (377)
T 3isz_A 238 HAGTGSNNVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEK----HNLKYRIEWN---LSGKPFLTKPGKLLDSITSAIE 310 (377)
T ss_dssp EECCSCSSCCCSEEEEEEEEEECTTSCHHHHHHHHHHHHHH----TTCCEEEEEE---ECCCCEECCTTHHHHHHHHHHH
T ss_pred ECCCCCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCeEEEEE---ecCCCCcCCCCHHHHHHHHHHH
Confidence 9998 899999999999999999999999999999998763 5777877762 1222323457789999999999
Q ss_pred hhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 359 DMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 359 ~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
+.+|.++. ....+|++|++++.+. +|++. |||.. ..+|++||+++++++.+++++|+.++.+|++
T Consensus 311 ~~~g~~~~--~~~~~g~tDa~~~~~~g~~~v~--~Gp~~------~~~H~~~E~i~~~~l~~~~~i~~~~i~~ll~ 376 (377)
T 3isz_A 311 ETIGITPK--AETGGGTSDGRFIALMGAEVVE--FGPLN------STIHKVNECVSVEDLGKCGEIYHKMLVNLLD 376 (377)
T ss_dssp HHHSCCCE--EEECSSCCSHHHHHTTTCEEEE--CCSBC------TTTTSTTCEEEHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhCCCCe--eeccCcccHHHHHHHcCCCEEE--ECCCC------CcccCCCCcEEHHHHHHHHHHHHHHHHHHhh
Confidence 97788764 3466899999999887 66544 77653 4599999999999999999999999999885
No 8
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=9.8e-53 Score=419.59 Aligned_cols=359 Identities=18% Similarity=0.271 Sum_probs=291.6
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecc--cCCceEEEEEcCCCCceEEEEeeccCCCCcCcCCC--
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP--VAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEW-- 130 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w-- 130 (450)
+++++++++|++|||+|++|.++++||.++|+++|++++.. +..+|++++++. ++|+|+|++||||||+++..+|
T Consensus 6 ~~~~~~l~~lv~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~Vp~~~~~~w~~ 84 (393)
T 1vgy_A 6 TQSLELAKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRRGT-KAPVVCFAGHTDVVPTGPVEKWDS 84 (393)
T ss_dssp SHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEECS-SSSEEEEEEECCBCCCCCGGGSSS
T ss_pred HHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEECC-CCCEEEEEcccCCcCCCCcccCCC
Confidence 56899999999999999999999999999999999998763 346899999943 3589999999999999877788
Q ss_pred -cccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-c-cchHHHHHccccc--ccceEEE
Q 013076 131 -EYKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG-G-GGAHKVLEAGVLE--KVNAIFG 201 (450)
Q Consensus 131 -~~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg-~-~Ga~~l~~~~~~~--~~d~~i~ 201 (450)
||.+ +.||++||||+ |++++++|.|++.|++.+.+++++|+|+|+++||+ + .|++.+++..... .+|++++
T Consensus 85 ~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (393)
T 1vgy_A 85 PPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIV 164 (393)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEE
Confidence 4554 46899999998 79999999999999987778899999999999994 3 7999888754322 4677776
Q ss_pred eccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhccc-CCCCCCceEEEEEEe
Q 013076 202 LHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRE-ADPLDSQVVTVAKFQ 280 (450)
Q Consensus 202 ~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~-~~~~~~~t~~i~~i~ 280 (450)
.++.+..+.+.. +. ..++|..+++|+++|+++|++.|+.|.|||..+++++.+|+.+..+. .+....++++++.|+
T Consensus 165 ~e~~~~~~~g~~-i~--~g~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~v~~i~ 241 (393)
T 1vgy_A 165 GEPTAVDKLGDM-IK--NGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNIN 241 (393)
T ss_dssp CCCCBSSSTTSE-EE--CEECEEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCCCSSCCCCEEEEEEEE
T ss_pred eCCCCcccCCce-eE--EeeeeEEEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhcccccccccccCCCeEEEeeEc
Confidence 543322223322 11 23579999999999999999999999999999999999998864322 233456799999999
Q ss_pred cCC-CCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHh
Q 013076 281 GGG-AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGD 359 (450)
Q Consensus 281 gG~-~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 359 (450)
||. +.|+||++|++.+|+|+++.++.+++.++|+++++. .++++++++.. ...|...+|+++++.+.+++++
T Consensus 242 gG~~~~NviP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~----~~~~~~~~~~~---~~~p~~~~~~~l~~~~~~~~~~ 314 (393)
T 1vgy_A 242 GGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDK----HGVQYDLQWSC---SGQPFLTQAGKLTDVARAAIAE 314 (393)
T ss_dssp ECCSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHHHH----TTCCEEEEEEE---EECCEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCcccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHH----hCCCeEEEEec---CCCcccCCCcHHHHHHHHHHHH
Confidence 997 899999999999999999999999999999998864 45666666521 1222234577899999999999
Q ss_pred hcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhh
Q 013076 360 MLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLE 434 (450)
Q Consensus 360 ~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 434 (450)
.+|.++. ...++|++|++++.+. +|+ +.|||.. ..+|++||+++++++.+++++|+.++.++++.
T Consensus 315 ~~g~~~~--~~~~~g~~D~~~~~~~~~P~--v~~Gp~~------~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 380 (393)
T 1vgy_A 315 TCGIEAE--LSTTGGTSDGRFIKAMAQEL--IELGPSN------ATIHQINENVRLNDIPKLSAVYEGILVRLLAG 380 (393)
T ss_dssp HHSSCCE--EECCSCCCTHHHHGGGEEEE--EECCSBC------TTTTSTTCEEETTHHHHHHHHHHHHHHHHC--
T ss_pred HcCCCce--EecCCccchHHHHHhCCCCE--EEECCCC------CCCCCCCCceeHHHHHHHHHHHHHHHHHHhcc
Confidence 8888763 4567899999999984 885 3478653 45999999999999999999999999999864
No 9
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=5.2e-52 Score=425.04 Aligned_cols=377 Identities=14% Similarity=0.163 Sum_probs=299.7
Q ss_pred ChhHHHHHHHHhhhhHHHHHHHHHHhHcCCCC--Ccc------hHHHHHHHHHHHHhcCCceeccc--------C-----
Q 013076 39 DIPKKLLNFAKRQELVGWMIGIRRKIHQNPEL--GYQ------EFETSQLIRSELDKMGIKYKHPV--------A----- 97 (450)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~ips~--s~~------e~~~~~~l~~~l~~~G~~~~~~~--------~----- 97 (450)
...+++.++++.++ +++++++++|++|||+ |++ |.++++||+++|+++|+++++.. +
T Consensus 11 ~~~~~i~~~i~~~~--~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~ 88 (485)
T 3dlj_A 11 ALLEKVFQYIDLHQ--DEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPI 88 (485)
T ss_dssp TTHHHHHHHHHHTH--HHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEEC
T ss_pred HHHHHHHHHHHHhH--HHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCC
Confidence 35678999999988 9999999999999999 887 57899999999999999987632 2
Q ss_pred CceEEEEEcCC-CCceEEEEeeccCCCCcCcCCC---cccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCce
Q 013076 98 VTGVVGFIGTG-EPPFVALRADMDSLPLQEMVEW---EYKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGT 169 (450)
Q Consensus 98 ~~nvva~~~~~-~~~~ill~~H~DvVp~~~~~~w---~~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~ 169 (450)
.+||+|+++++ ++|+|+|+|||||||+++.+.| ||.+ +++|+|||||+ |++++++|+|+++|++.+.+++++
T Consensus 89 ~~~v~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~ 168 (485)
T 3dlj_A 89 PPVILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVN 168 (485)
T ss_dssp CCEEEEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSE
T ss_pred CcEEEEEECCCCCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCcc
Confidence 25799999765 4689999999999999876678 4554 36899999998 799999999999999988889999
Q ss_pred EEEEEecCCC-CccchHHHHHccc---ccccceEEEeccCC-CCCCceEEeecCcccccceEEEEEEEecCC--CCCCCC
Q 013076 170 VVLVFQPAEE-GGGGAHKVLEAGV---LEKVNAIFGLHVDP-NLPIGEVASRPGPLLAGSGFFEAVIGGKGG--HAAIPQ 242 (450)
Q Consensus 170 i~~~~~~dEE-g~~Ga~~l~~~~~---~~~~d~~i~~~~~~-~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~--Hss~p~ 242 (450)
|+|+|+++|| ++.|++.+++++. ++++|+++++|+.. +.....+.. .++|..+++|+++|+++ |+|.
T Consensus 169 v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~----g~~g~~~~~i~v~G~~~~~H~~~-- 242 (485)
T 3dlj_A 169 IKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITY----GTRGNSYFMVEVKCRDQDFHSGT-- 242 (485)
T ss_dssp EEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCBCCC--CCEEEE----EECEEEEEEEEEESCSSCEETTT--
T ss_pred EEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCCccCCCCeeEEE----eccceEEEEEEEEECCCCCcCCC--
Confidence 9999999999 6789999998763 45789998876421 101122221 24699999999999999 9997
Q ss_pred CCCcHHHHHHHHHHHHhhhhccc-----------CCCC----------------------------------------CC
Q 013076 243 HSIDPILAASNVIVSLQHLVSRE-----------ADPL----------------------------------------DS 271 (450)
Q Consensus 243 ~g~nAi~~~~~~l~~l~~~~~~~-----------~~~~----------------------------------------~~ 271 (450)
.|.||+..++.++..|..+..+. .++. ..
T Consensus 243 ~g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 322 (485)
T 3dlj_A 243 FGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRY 322 (485)
T ss_dssp STTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHHTS
T ss_pred CCccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHhcC
Confidence 35555555555555555443221 1110 26
Q ss_pred ceEEEEEEecC----CCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhC--CeEEEEeeccCCCCCCCccC
Q 013076 272 QVVTVAKFQGG----GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQR--CSATVDFLSKEKPFFPPTIN 345 (450)
Q Consensus 272 ~t~~i~~i~gG----~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~ 345 (450)
++++++.|+|| .+.||||++|++.+++|+.+.++.+++.++|+++++..+..++ +++++++ ...+|++.+
T Consensus 323 ~~~~v~~i~gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~~~~v~~----~~~~pp~~~ 398 (485)
T 3dlj_A 323 PSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSM----TLGLHPWIA 398 (485)
T ss_dssp CEEEEEEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCSSEEEEEE----EEEECCEEC
T ss_pred CceEEEEEecCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccccCCCeeEEEEE----cCCCCceeC
Confidence 88999999999 8999999999999999999999999999999999999988887 4777776 345666655
Q ss_pred C--hHHHHHHHHHHHhhcCCccccccCCCcccchH-HHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHH
Q 013076 346 N--NDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDF-SFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAA 422 (450)
Q Consensus 346 d--~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~-~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~ 422 (450)
+ +++++.+++++++++|.+++. ...+|++|+ .+|.+.+|..++++|.+.. ....|+|||+++++++..+++
T Consensus 399 ~~d~~~~~~~~~a~~~~~G~~~~~--~~~ggs~Dfa~~~~~~~p~~~i~~g~g~~----~~~~H~p~E~i~~~~l~~g~~ 472 (485)
T 3dlj_A 399 NIDDTQYLAAKRAIRTVFGTEPDM--IRDGSTIPIAKMFQEIVHKSVVLIPLGAV----DDGEHSQNEKINRWNYIEGTK 472 (485)
T ss_dssp CTTSHHHHHHHHHHHHHHSSCCEE--EEESSCCHHHHHHHHHTC--CEECCCBCT----TCCTTSTTCEEEHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCcee--cCCCCchhHHHHHHHHhCCCEEEecCCCC----CCCCcCCCCCccHHHHHHHHH
Confidence 4 489999999999987987642 346788996 5777767766666676532 146999999999999999999
Q ss_pred HHHHHHHHHHh
Q 013076 423 LHASLALRYLL 433 (450)
Q Consensus 423 ~~~~~~~~l~~ 433 (450)
+|+.++.++.+
T Consensus 473 ~l~~~l~~la~ 483 (485)
T 3dlj_A 473 LFAAFFLEMAQ 483 (485)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 99999998864
No 10
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.6e-52 Score=418.41 Aligned_cols=357 Identities=18% Similarity=0.219 Sum_probs=295.2
Q ss_pred HHHHHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceeccc-------CCceEEEEEcCC----CCce
Q 013076 44 LLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV-------AVTGVVGFIGTG----EPPF 112 (450)
Q Consensus 44 ~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nvva~~~~~----~~~~ 112 (450)
+..+++.++ +++++++++|++|||+|++|.++++||.++|+++|++++.+. +.+||+|+++++ ++|+
T Consensus 15 ~~~~~~~~~--~~~~~~l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~ 92 (396)
T 3rza_A 15 LYFQGMINE--QRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPK 92 (396)
T ss_dssp ----CCSCH--HHHHHHHHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCC
T ss_pred eeEEEeecH--HHHHHHHHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCe
Confidence 445677777 999999999999999999999999999999999999988643 368999999764 4699
Q ss_pred EEEEeeccCCCCcCcCCCccccCCCCceecccc-------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cccch
Q 013076 113 VALRADMDSLPLQEMVEWEYKSKIPGKMHACGH-------DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGA 184 (450)
Q Consensus 113 ill~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~-------kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga 184 (450)
|+|+|||||||+++ .|+...+.+|++||||+ |++++++|+|+++|++.+. ++++|.|+|+++|| ++.|+
T Consensus 93 i~l~aH~D~vp~g~--~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~Ga 169 (396)
T 3rza_A 93 LYLTSHMDTVVPAI--NVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEESGLIGA 169 (396)
T ss_dssp EEEEEECCBCSSCS--SCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-CCCCEEEEEESCGGGTSHHH
T ss_pred EEEEEECCccCCCC--CcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEcccccccHhH
Confidence 99999999999864 46332333599999996 5999999999999998763 67999999999999 66899
Q ss_pred HHHHHcccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcc
Q 013076 185 HKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSR 264 (450)
Q Consensus 185 ~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~ 264 (450)
+.+..++. ..++.+. .++..+.+.+.+. .+|..+++|+++|+++|+|.|+.|+||+..+++++.+|+...
T Consensus 170 ~~~~~~~~--~~~~~~~--~~~~~~~g~i~~~----~~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~-- 239 (396)
T 3rza_A 170 KELNSELL--DADFGYA--IDASADVGTTVVG----APTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLGQ-- 239 (396)
T ss_dssp HHCCGGGC--CCSEEEE--EEESSCTTCEEEE----ECEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCCEE--
T ss_pred hhhchhhc--ccceEEE--EecCCCcceEEEc----CCceEEEEEEEEeEecCCCCccccccHHHHHHHHHHhcccCC--
Confidence 98865432 2344444 3444455655443 358899999999999999999999999999999999987631
Q ss_pred cCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCc-
Q 013076 265 EADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPT- 343 (450)
Q Consensus 265 ~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~- 343 (450)
.+ ...+++++.|+||.+.|+||++|++.+|+|+.+.++.+++.++|+++++..+..+++++++++ ...+|++
T Consensus 240 -~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~a~~~g~~~~i~~----~~~~p~~~ 312 (396)
T 3rza_A 240 -VD--EITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTV----EQSYPGFK 312 (396)
T ss_dssp -EE--TTEEEEEEEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE----EEEECCEE
T ss_pred -CC--CCceeeeeEEecCCCCcccCceEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEE----EeccCCcc
Confidence 12 347899999999999999999999999999999999999999999999998888899888877 3455555
Q ss_pred -cCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHH
Q 013076 344 -INNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGA 421 (450)
Q Consensus 344 -~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~ 421 (450)
.+|+++++.+++++++. |.++ ....++|++|+++|.+. +|++++++| . ..+|++||+++++++..++
T Consensus 313 ~~~d~~l~~~~~~~~~~~-g~~~--~~~~~~g~tD~~~~~~~giP~~~~g~g--~------~~~H~~~E~v~~~~l~~~~ 381 (396)
T 3rza_A 313 INDNEAVVKIAQESARNL-GLSA--NTIISGGGSDGSIINTFGIPSVILGVG--Y------EKIHTTNERMPIKSLNLLA 381 (396)
T ss_dssp CCTTSHHHHHHHHHHHHT-TCCC--CEEECSSCCHHHHHGGGTCCEEEEECC--C------BSTTSTTCEEEHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHc-CCCc--eecccceeccHHHHhhCCCcEEEECCC--C------CCCCCCcceeEHHHHHHHH
Confidence 45788999999999986 8765 24567899999999987 998875544 2 3599999999999999999
Q ss_pred HHHHHHHHHHHh
Q 013076 422 ALHASLALRYLL 433 (450)
Q Consensus 422 ~~~~~~~~~l~~ 433 (450)
++|+.++.++.+
T Consensus 382 ~~~~~~~~~l~~ 393 (396)
T 3rza_A 382 SQVLEIIKIVAR 393 (396)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999875
No 11
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=3.5e-51 Score=405.63 Aligned_cols=345 Identities=17% Similarity=0.234 Sum_probs=289.3
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceeccc-------CCceEEEEEcCC--CCceEEEEeeccCCCCc
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV-------AVTGVVGFIGTG--EPPFVALRADMDSLPLQ 125 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nvva~~~~~--~~~~ill~~H~DvVp~~ 125 (450)
+++++++++|++|||+|++|.++++||.++|+++|++++.+. +++|++|+++++ ++|+|+|++||||||++
T Consensus 6 ~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~ 85 (373)
T 3gb0_A 6 ERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPG 85 (373)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSSC
T ss_pred HHHHHHHHHHhcccCCCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCCC
Confidence 778999999999999999999999999999999999988653 258999999664 46999999999999986
Q ss_pred CcCCCccccCCCCceecccc-------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccc
Q 013076 126 EMVEWEYKSKIPGKMHACGH-------DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVN 197 (450)
Q Consensus 126 ~~~~w~~~~~~~g~l~GrG~-------kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d 197 (450)
+ .|+. ..++|++||||+ |++++++|.+++.|++.+. ++++|.|+|+++|| ++.|++.+..++. ++|
T Consensus 86 ~--~~~p-~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~~~ 159 (373)
T 3gb0_A 86 N--GIKP-SIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGLVGAKALDRERI--TAK 159 (373)
T ss_dssp S--SCCC-EEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEEEEESCGGGTSHHHHHSCGGGC--CCS
T ss_pred C--CcCc-EEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEeccccCchhhhhhCHHhc--CCC
Confidence 5 4532 346799999995 5999999999999998764 78999999999999 6689998855432 345
Q ss_pred eEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEE
Q 013076 198 AIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTV 276 (450)
Q Consensus 198 ~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i 276 (450)
+.+. .++..+.+.+... .+|..+++|+++|+++|++ .|+.|+||+..+++++.+|+.. ..+ ...++++
T Consensus 160 ~~~~--~~~~~~~g~i~~~----~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~~---~~~--~~~~~~v 228 (373)
T 3gb0_A 160 YGYA--LDSDGKVGEIVVA----APTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLG---RID--SETTANI 228 (373)
T ss_dssp EEEE--EEECSCTTEEEEE----ECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCCE---EEE--TTEEEEE
T ss_pred EEEE--EcCCCCCCeEEEc----CCCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhcccc---cCC--Cccccce
Confidence 4444 3444455655443 3589999999999999999 8999999999999999988652 111 3478999
Q ss_pred EEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCc--cCChHHHHHHH
Q 013076 277 AKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPT--INNNDLHKYFQ 354 (450)
Q Consensus 277 ~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~d~~~~~~~~ 354 (450)
+.|+||.+.|+||++|++.+|+|+.+.++.+++.++|+++++..+..+++++++++ ...+|++ .+|+++++.++
T Consensus 229 g~i~gG~~~Nvip~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~i~~----~~~~~~~~~~~~~~l~~~~~ 304 (373)
T 3gb0_A 229 GRFEGGTQTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVEV----NVMYPGFKFADGDHVVEVAK 304 (373)
T ss_dssp EEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE----EEEECCEECCTTCHHHHHHH
T ss_pred eEEecCcccccccceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCeEEEEE----ecccCCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999998888899888876 3445555 35788999999
Q ss_pred HHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHH
Q 013076 355 TVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRY 431 (450)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l 431 (450)
+++++. |.++. ....+|++|+++|.+. +|++++++| . ..+|++||+++++++..++++|+.++.++
T Consensus 305 ~~~~~~-g~~~~--~~~~~g~~D~~~~~~~gip~~~~g~~--~------~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 371 (373)
T 3gb0_A 305 RAAEKI-GRTPS--LHQSGGGSDANVIAGHGIPTVNLAVG--Y------EEIHTTNEKIPVEELAKTAELVVAIIEEV 371 (373)
T ss_dssp HHHHHT-TCCCE--EEECSSCCHHHHHHHTTCCEEEEECC--C------BSTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh-CCCce--EecccCcchHHHHHhCCCCEEEecCC--C------CcCcCCceEEEHHHHHHHHHHHHHHHHHh
Confidence 999985 87653 4567899999999987 998765443 2 35999999999999999999999999888
No 12
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=7e-52 Score=410.09 Aligned_cols=343 Identities=16% Similarity=0.162 Sum_probs=275.8
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCc-eecccCCceEEEEEcCCCCceEEEEeeccCCCCcCcCCCccc
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIK-YKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYK 133 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~~~ 133 (450)
+++++++++|++|||+|++|.++++||+++|+++|++ ++....++|++++++++++|+|+|+|||||||+++ .|++.
T Consensus 13 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~~~~~v~l~~H~D~vp~~~--~~~~~ 90 (369)
T 3tx8_A 13 GDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRGLASRVMLAGHIDTVPIAD--NLPSR 90 (369)
T ss_dssp SCHHHHHHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCCCSCEEEEEEECCBSCCCS--CCSCE
T ss_pred HHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCCCCCeEEEEcccCccCCCC--CCCCe
Confidence 6789999999999999999999999999999999884 44433467999999766669999999999999875 45554
Q ss_pred cCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc--cchHHHHHccc-ccccceEEEeccCC
Q 013076 134 SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG--GGAHKVLEAGV-LEKVNAIFGLHVDP 206 (450)
Q Consensus 134 ~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~--~Ga~~l~~~~~-~~~~d~~i~~~~~~ 206 (450)
. ++|++||||+ |++++++|+|+++|++. ..++++|.|+|+++|| ++ .|++.+++++. ..++|+++. .+|
T Consensus 91 ~-~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~~~~~~~~~~i~--~ep 166 (369)
T 3tx8_A 91 V-EDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALL--GEP 166 (369)
T ss_dssp E-CSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSSCTTSCHHHHHHHHCGGGGCCSEEEE--CCC
T ss_pred E-ECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccccCcccccHHHHHHhcccccCCCEEEE--eCC
Confidence 3 5899999998 69999999999999874 4789999999999999 54 69999998752 124565554 344
Q ss_pred CCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCC--CC-CCceEEEEEEecCC
Q 013076 207 NLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREAD--PL-DSQVVTVAKFQGGG 283 (450)
Q Consensus 207 ~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~--~~-~~~t~~i~~i~gG~ 283 (450)
.. +.+.. .++|..+++|+++|+++|+|.|+.|.||+..+++++.+|+++..+..+ +. ..++++++.|+||.
T Consensus 167 ~~--~~i~~----~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~vg~i~gG~ 240 (369)
T 3tx8_A 167 TG--GWIEA----GCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVNIDGLTYREGLNIVFCESGV 240 (369)
T ss_dssp CT--TCEEE----SBCEEEEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCEEEETTEEEECEEEEEEEEECS
T ss_pred CC--Cceee----ecceEEEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhcccccccCCcccCceEEEEEEECCC
Confidence 32 33332 357999999999999999999999999999999999999987543321 11 25789999999999
Q ss_pred CCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCC
Q 013076 284 AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDT 363 (450)
Q Consensus 284 ~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~ 363 (450)
+.|+||++|++.+|+|++|+++.+++.++|++++++.+ .+++++++... .+++++.. |+++++.+.+++ |.
T Consensus 241 ~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~-~~g~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~----g~ 311 (369)
T 3tx8_A 241 ANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELDG-QDGIEWAVEDG---AGGALPGL-GQQVTSGLIDAV----GR 311 (369)
T ss_dssp BTTBCCSEEEEEEEEEECTTSCHHHHHHHHHHHTTTTT-STTEEEEEEEE---ECCBCCCT-TSHHHHHHHHHH----CG
T ss_pred CCccccCcEEEEEEEecCCCCCHHHHHHHHHHHHHhcc-cCCeEEEEEec---CCCCCCCC-CCHHHHHHHHHc----CC
Confidence 99999999999999999999999999999999988765 56767766421 34444433 556666665553 55
Q ss_pred -ccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHH
Q 013076 364 -QKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLAL 429 (450)
Q Consensus 364 -~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~ 429 (450)
++ ....|++|+++|.+. +|++. |||+ ....+|++||+++++++.+++++|+.++.
T Consensus 312 ~~~----~~~~ggtD~~~~~~~giP~~~--~Gpg-----~~~~~H~~~E~v~~~~l~~~~~~l~~~l~ 368 (369)
T 3tx8_A 312 EKI----RAKFGWTDVSRFSAMGIPALN--FGAG-----DPSFAHKRDEQCPVEQITDVAAILKQYLS 368 (369)
T ss_dssp GGE----EECCSCCTHHHHHTTTCCEEE--ECSS-----CSSSSSCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred CCC----cccccccchHHHhhCCCCEEE--ECCC-----ChhhCCCCCcEEEHHHHHHHHHHHHHHhh
Confidence 32 246788999999987 99864 6754 34579999999999999999999999875
No 13
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=1.1e-50 Score=413.72 Aligned_cols=375 Identities=15% Similarity=0.079 Sum_probs=292.8
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcc----------hHHHHHHHHHHHHhcCCc---eec--ccC-CceEEEE
Q 013076 41 PKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQ----------EFETSQLIRSELDKMGIK---YKH--PVA-VTGVVGF 104 (450)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~----------e~~~~~~l~~~l~~~G~~---~~~--~~~-~~nvva~ 104 (450)
.+++.+++++++ .+++++++++|++|||+|++ |.++++|++++|+++||+ ++. ..+ ++||+|+
T Consensus 5 ~~~~~~~~~~~~-~~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~ 83 (472)
T 3pfe_A 5 PQGLYDYICQQW-QEEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFME 83 (472)
T ss_dssp HHHHHHHHHHHH-HHTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEE
T ss_pred HHHHHHHHHHhh-HHHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEE
Confidence 456788888752 15799999999999999965 889999999999999995 432 222 5899999
Q ss_pred EcCCCCceEEEEeeccCCCCcCcCCCc-----ccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEe
Q 013076 105 IGTGEPPFVALRADMDSLPLQEMVEWE-----YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQ 175 (450)
Q Consensus 105 ~~~~~~~~ill~~H~DvVp~~~~~~w~-----~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~ 175 (450)
+++.++|+|+|+|||||||++ +.|. |.+ ++||++||||+ |++++++|+|+++|++.+..++ +|+|+|+
T Consensus 84 ~~g~~~~~i~l~~H~D~vp~~--~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~-~v~~~~~ 160 (472)
T 3pfe_A 84 IPGQIDDTVLLYGHLDKQPEM--SGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYP-RCILIIE 160 (472)
T ss_dssp ECCSEEEEEEEEEECCBCCCC--SCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCE-EEEEEEE
T ss_pred EcCCCCCeEEEEccccCCCCc--CCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCC-cEEEEEE
Confidence 976446899999999999986 3564 554 46899999998 7999999999999998886666 9999999
Q ss_pred cCCC-CccchHHHHHcc--cccccceEEEeccCCCCCCceEEeecCcccccceEEE--EEEEecCCCCCCCCCC-CcHHH
Q 013076 176 PAEE-GGGGAHKVLEAG--VLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFE--AVIGGKGGHAAIPQHS-IDPIL 249 (450)
Q Consensus 176 ~dEE-g~~Ga~~l~~~~--~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~--i~v~G~~~Hss~p~~g-~nAi~ 249 (450)
++|| ++.|++.+++++ .+.++|++++.+.... +.+...+. ..++|..+++ |+++|+++|+|.|+.+ .|||.
T Consensus 161 ~~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~i~--~g~~G~~~~~~~v~~~G~~~H~~~~~~~~~nai~ 237 (472)
T 3pfe_A 161 ACEESGSYDLPFYIELLKERIGKPSLVICLDSGAG-NYEQLWMT--TSLRGNLVGKLTVELINEGVHSGSASGIVADSFR 237 (472)
T ss_dssp SCGGGTSTTHHHHHHHHHHHHCCCSEEEEECCBCS-CSSSCEEE--EEECEEEEEEEEEESCSSCBCHHHHTTTSCCHHH
T ss_pred eCCCCCChhHHHHHHHhHhhccCCCEEEEeCCCcC-CCCCeeEE--EeeeEEEEEEEEEEeCCCCcccCCCCCCCCCHHH
Confidence 9999 678999999875 3346899998864321 11111111 1245777766 5558999999988754 59999
Q ss_pred HHHHHHHHHhhhh-ccc--------C-----------------------------CCCC------------CceEEEEEE
Q 013076 250 AASNVIVSLQHLV-SRE--------A-----------------------------DPLD------------SQVVTVAKF 279 (450)
Q Consensus 250 ~~~~~l~~l~~~~-~~~--------~-----------------------------~~~~------------~~t~~i~~i 279 (450)
.+++++.+|+++. .+. . ++.. .++++++.|
T Consensus 238 ~~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i~~i 317 (472)
T 3pfe_A 238 VARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGA 317 (472)
T ss_dssp HHHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEEEEE
T ss_pred HHHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEEeee
Confidence 9999999998873 110 0 0010 579999999
Q ss_pred ecC----CCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCC-CCCCccC---ChHHHH
Q 013076 280 QGG----GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKP-FFPPTIN---NNDLHK 351 (450)
Q Consensus 280 ~gG----~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~---d~~~~~ 351 (450)
+|| .+.|+||++|++.+|+|+.++++.+++.++|+++++..+ .++++++++. .. .+|++.. ++.+++
T Consensus 318 ~gG~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~-~~g~~v~v~~----~~~~~pp~~~~~n~~~l~~ 392 (472)
T 3pfe_A 318 DGFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP-PYNAKVDFKI----QNGGSKGWNAPLLSDWLAK 392 (472)
T ss_dssp ESCCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC-GGGCEEEEEE----CSCCBCCEECCCCCHHHHH
T ss_pred ecCcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC-CCCeEEEEEe----cCCCCCcccCCCCChHHHH
Confidence 987 689999999999999999999999999999999998764 5688888876 44 5666543 455789
Q ss_pred HHHHHHHhhcCCccccccCCCcccch-H-HHHhhhcCeE-EEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHH
Q 013076 352 YFQTVAGDMLDTQKVKVMAPVMGSED-F-SFYQEVMPGY-FFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLA 428 (450)
Q Consensus 352 ~~~~~~~~~~g~~~~~~~~~~~g~tD-~-~~~~~~~p~~-~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~ 428 (450)
.+++++++++|.+++. ...|++| + ++|.+.+|.+ ++++|++... ..+|+|||+++++++.+++++|+.++
T Consensus 393 ~~~~a~~~~~G~~~~~---~~~gg~d~f~~~~~~~~Pg~p~v~~G~g~~~----~~~H~p~E~i~~~~l~~g~~~l~~~l 465 (472)
T 3pfe_A 393 AASEASMTYYDKPAAY---MGEGGTIPFMSMLGEQFPKAQFMITGVLGPH----SNAHGPNEFLHLDMVKKLTSCVSYVL 465 (472)
T ss_dssp HHHHHHHHHHSSCCEE---EEESSCCHHHHHHHHHCTTCEEEEECCBCTT----CCTTSTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcee---ccCCCchhhHHHHHHHcCCCCEEEecCCCCC----CCCcCCCcceeHHHHHHHHHHHHHHH
Confidence 9999999987987642 2356666 4 6677767765 6667765421 46999999999999999999999999
Q ss_pred HHHHhh
Q 013076 429 LRYLLE 434 (450)
Q Consensus 429 ~~l~~~ 434 (450)
.++.+.
T Consensus 466 ~~la~~ 471 (472)
T 3pfe_A 466 YSFSQK 471 (472)
T ss_dssp HHHHHC
T ss_pred HHHhhc
Confidence 998753
No 14
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=2.1e-50 Score=413.14 Aligned_cols=373 Identities=15% Similarity=0.128 Sum_probs=301.5
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcch------HHHHHHHHHHHHhcCCceeccc--------CC-----ceEE
Q 013076 42 KKLLNFAKRQELVGWMIGIRRKIHQNPELGYQE------FETSQLIRSELDKMGIKYKHPV--------AV-----TGVV 102 (450)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e------~~~~~~l~~~l~~~G~~~~~~~--------~~-----~nvv 102 (450)
+++.++++.+. +++++++++|++|||+|++| .++++||+++|+++|+++++.. +. +||+
T Consensus 9 ~~~~~~~~~~~--~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~ 86 (479)
T 2zog_A 9 KAVFQYIDENQ--DRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILL 86 (479)
T ss_dssp HHHHHHHHHTH--HHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEE
T ss_pred HHHHHHHHHhH--HHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEE
Confidence 46788888877 99999999999999999876 7899999999999999987642 22 8999
Q ss_pred EEEcCC-CCceEEEEeeccCCCCcCcCCCc---ccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEE
Q 013076 103 GFIGTG-EPPFVALRADMDSLPLQEMVEWE---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVF 174 (450)
Q Consensus 103 a~~~~~-~~~~ill~~H~DvVp~~~~~~w~---~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~ 174 (450)
++++++ ++|+|+|+|||||||+++...|. |.. +.||++||||+ |++++++|.|+++|++.+.+++++|+|+|
T Consensus 87 a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~ 166 (479)
T 2zog_A 87 GKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCL 166 (479)
T ss_dssp EEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEE
T ss_pred EEecCCCCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEEE
Confidence 999765 36899999999999997766784 554 36899999996 79999999999999998888899999999
Q ss_pred ecCCC-CccchHHHHHcc---cccccceEEEeccCC-CCCCceEEeecCcccccceEEEEEEEecC--CCCCCCCCCCcH
Q 013076 175 QPAEE-GGGGAHKVLEAG---VLEKVNAIFGLHVDP-NLPIGEVASRPGPLLAGSGFFEAVIGGKG--GHAAIPQHSIDP 247 (450)
Q Consensus 175 ~~dEE-g~~Ga~~l~~~~---~~~~~d~~i~~~~~~-~~~~g~~~~~~g~~~~G~~~~~i~v~G~~--~Hss~p~~g~nA 247 (450)
+++|| |+.|++.+++++ ++.++|++++.+... +...+.+.+ .++|..+++|+++|++ +|||.+ |.||
T Consensus 167 ~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~~----~~~G~~~~~i~v~G~~~~~Hs~~~--g~~a 240 (479)
T 2zog_A 167 EGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITY----GLRGICYFFIEVECSDKDLHSGVY--GGSV 240 (479)
T ss_dssp ESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEEE----EECEEEEEEEEEECCSSCEEHHHH--TTTS
T ss_pred ecccccCCccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEEE----ecceEEEEEEEEEeCCCCCccCCC--CCCc
Confidence 99999 678999999875 334678888765321 111233322 3579999999999999 999985 7899
Q ss_pred HHHHHHHHHHHhhhhcccC---------------------------C---------C-----------C----CCceEEE
Q 013076 248 ILAASNVIVSLQHLVSREA---------------------------D---------P-----------L----DSQVVTV 276 (450)
Q Consensus 248 i~~~~~~l~~l~~~~~~~~---------------------------~---------~-----------~----~~~t~~i 276 (450)
+..+++++..|+.+..+.. + . + ..+++++
T Consensus 241 i~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v 320 (479)
T 2zog_A 241 HEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSL 320 (479)
T ss_dssp CCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHHTSCEEEE
T ss_pred cCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhhcCCCeEE
Confidence 9999999988876643210 0 0 0 1578999
Q ss_pred EEEecC----CCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhh--CCeEEEEeeccCCCCCCCc--cCChH
Q 013076 277 AKFQGG----GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQ--RCSATVDFLSKEKPFFPPT--INNND 348 (450)
Q Consensus 277 ~~i~gG----~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~--~~d~~ 348 (450)
+.|+|| .+.|+||++|++.+++|+.|+++.+++.++|+++++..+..+ +..+++++. ..+|++ ..|++
T Consensus 321 ~~i~gg~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~d~~ 396 (479)
T 2zog_A 321 HGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVYMG----HGGKPWVSDFNHP 396 (479)
T ss_dssp EEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCSEEEEEEE----EEECCEECCTTSH
T ss_pred eeeecCCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhccCCCceEEEEec----CCCCceecCCCCH
Confidence 999998 799999999999999999999999999999999999877655 456666652 234454 34778
Q ss_pred HHHHHHHHHHhhcCCccccccCCCcccchH-HHHhhh--cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHH
Q 013076 349 LHKYFQTVAGDMLDTQKVKVMAPVMGSEDF-SFYQEV--MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHA 425 (450)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~-~~~~~~--~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~ 425 (450)
+++.+++++++++|.++. ....+|++|+ ++|.+. +|++++++|+.. ..+|++||+++++++.+++++|+
T Consensus 397 ~~~~~~~a~~~~~g~~~~--~~~~~gs~d~~~~~~~~~~~p~~~~g~g~~~------~~~H~~~E~i~~~~l~~~~~~~~ 468 (479)
T 2zog_A 397 HYQAGRRALKTVFGVEPD--LTREGGSIPVTLTFQEATGKNVMLLPVGSAD------DGAHSQNEKLNRLNYIEGTKMLA 468 (479)
T ss_dssp HHHHHHHHHHHHHSSCCE--EEEESSCCTHHHHHHHHHCSEEEECCCBCTT------CCTTSTTCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCce--ecCCCCccchHHHHHHHhCCCEEEecCCCCc------cCCCCCCCcEeHHHHHHHHHHHH
Confidence 999999999998888764 2345788997 577764 888776677532 46999999999999999999999
Q ss_pred HHHHHHHhh
Q 013076 426 SLALRYLLE 434 (450)
Q Consensus 426 ~~~~~l~~~ 434 (450)
.++.++++.
T Consensus 469 ~~~~~~~~~ 477 (479)
T 2zog_A 469 AYLYEVSQL 477 (479)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999999863
No 15
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=8.7e-51 Score=415.83 Aligned_cols=372 Identities=13% Similarity=0.119 Sum_probs=295.3
Q ss_pred HHHHHHHHhhhhHH-HHHHHHHHhHcCCCCCcch---HHHHHHHHHHHHhcCCceecc--cCCceEEEEEcCC--CCceE
Q 013076 42 KKLLNFAKRQELVG-WMIGIRRKIHQNPELGYQE---FETSQLIRSELDKMGIKYKHP--VAVTGVVGFIGTG--EPPFV 113 (450)
Q Consensus 42 ~~~~~~~~~~~~~~-~~~~~l~~l~~ips~s~~e---~~~~~~l~~~l~~~G~~~~~~--~~~~nvva~~~~~--~~~~i 113 (450)
+++.+++++++ + ++++++++|++|||+|++| .++++||+++|+++|++++.. .+.+||+++++++ ++|+|
T Consensus 32 ~~~~~~~~~~~--~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~~i 109 (481)
T 2pok_A 32 EQIEKFEKDHV--AQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKTL 109 (481)
T ss_dssp HHHHHHHHCHH--HHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCCEE
T ss_pred HHHHHHHHhhh--hHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCCeE
Confidence 57889999987 8 9999999999999999877 899999999999999998764 3468999999653 35899
Q ss_pred EEEeeccCCCCcCcCCC---cccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchH
Q 013076 114 ALRADMDSLPLQEMVEW---EYKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAH 185 (450)
Q Consensus 114 ll~~H~DvVp~~~~~~w---~~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~ 185 (450)
+|+|||||||+++.+.| ||.+ +.||++||||+ |++++++|.|+++|++.+..++++|+|+|+++|| |+.|++
T Consensus 110 ~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~g~~ 189 (481)
T 2pok_A 110 IFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDLD 189 (481)
T ss_dssp EEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESCGGGTTTTHH
T ss_pred EEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccccCchhHH
Confidence 99999999999876778 5654 45899999997 8999999999999998755788999999999999 678999
Q ss_pred HHHHccc--ccccceEEEeccCCCCCC-ceEEeecCcccccceEEEEEEEecC--CCCCCCCCCCcHHHHHHHHHHHHhh
Q 013076 186 KVLEAGV--LEKVNAIFGLHVDPNLPI-GEVASRPGPLLAGSGFFEAVIGGKG--GHAAIPQHSIDPILAASNVIVSLQH 260 (450)
Q Consensus 186 ~l~~~~~--~~~~d~~i~~~~~~~~~~-g~~~~~~g~~~~G~~~~~i~v~G~~--~Hss~p~~g~nAi~~~~~~l~~l~~ 260 (450)
.+++++. ++++|+++..+ +..+. +...+ ...++|..+++|+++|++ +||+.|+.|.|||..+++++.+|++
T Consensus 190 ~~~~~~~~~~~~~d~~i~~~--~~~~~~~~~~i--~~~~~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~ 265 (481)
T 2pok_A 190 KYLEKHADKLRGADLLVWEQ--GTKNALEQLEI--SGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRA 265 (481)
T ss_dssp HHHHHHHHHHTTCSEEECSC--CBBCTTSCEEE--ECCBCEEEEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHHTBC
T ss_pred HHHHHhHhhccCCCEEEECC--CCccCCCCeeE--EEecceeEEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHHhhC
Confidence 8887642 33378877643 32221 11222 235689999999999999 8999999999999999999999876
Q ss_pred hh-----------------------ccc--------------CCC-------------CCCceEEEEEEecCC----CCC
Q 013076 261 LV-----------------------SRE--------------ADP-------------LDSQVVTVAKFQGGG----AFN 286 (450)
Q Consensus 261 ~~-----------------------~~~--------------~~~-------------~~~~t~~i~~i~gG~----~~n 286 (450)
+. .+. .++ ...+++|++.|+||. +.|
T Consensus 266 ~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~gG~~~~~~~N 345 (481)
T 2pok_A 266 ADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQGVKT 345 (481)
T ss_dssp TTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEEECCSSSCCC
T ss_pred CCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeecCCCCCCCCe
Confidence 43 000 000 124799999999986 789
Q ss_pred CCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccc
Q 013076 287 VIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKV 366 (450)
Q Consensus 287 viP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~ 366 (450)
+||++|++.+|+|++|+++.+++.++|+++++..+. .++++++... .+++ ..+.|+++++.+++++++.+|.+++
T Consensus 346 vIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~-~~~~v~~~~~---~p~~-~~~~d~~l~~~~~~a~~~~~g~~~~ 420 (481)
T 2pok_A 346 ILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF-DKVELYYTLG---EMSY-RSDMSAPAILNVIELAKKFYPQGVS 420 (481)
T ss_dssp EECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-TTEEEEEEEE---ECCB-CCCSCSHHHHHHHHHHTTTCTTCEE
T ss_pred eccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhCC-CceEEEEccC---CCcc-cCCCCCHHHHHHHHHHHHHcCCCcc
Confidence 999999999999999999999999999999987543 4555554321 2222 2345788999999999998888763
Q ss_pred cccCCCcccchHHHHhhh--cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHH
Q 013076 367 KVMAPVMGSEDFSFYQEV--MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRY 431 (450)
Q Consensus 367 ~~~~~~~g~tD~~~~~~~--~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l 431 (450)
. ....+|++|+++|.+. +|++. +||+.. ...+|++||+++++++.+++++|+.++.++
T Consensus 421 ~-~~~~gg~~D~~~~~~~~g~p~v~--~G~g~~----~~~~H~~~E~i~i~~l~~~~~~~~~~l~~l 480 (481)
T 2pok_A 421 V-LPTTAGTGPMHTVFDALEVPMVA--FGLGNA----NSRDHGGDENVRIADYYTHIELVEELIRSY 480 (481)
T ss_dssp E-ESCBSSCCTHHHHHHHHCCCEEB--CCSBCT----TCCTTSTTCEEEHHHHHHHHHHHHHHHHTT
T ss_pred c-cccCCCCCchHHHHHHcCCCEEE--ecCCCc----ccCCCCCCCcEEHHHHHHHHHHHHHHHHhc
Confidence 2 2344455599999875 88754 565431 256999999999999999999999987653
No 16
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=2e-50 Score=399.40 Aligned_cols=339 Identities=15% Similarity=0.127 Sum_probs=272.8
Q ss_pred HHhhhhHHHHHHHHHHhHcCCCCC--c---chHHHHHHHHHHHHhcCCceeccc---CCceEEEEEcCCCCceEEEEeec
Q 013076 48 AKRQELVGWMIGIRRKIHQNPELG--Y---QEFETSQLIRSELDKMGIKYKHPV---AVTGVVGFIGTGEPPFVALRADM 119 (450)
Q Consensus 48 ~~~~~~~~~~~~~l~~l~~ips~s--~---~e~~~~~~l~~~l~~~G~~~~~~~---~~~nvva~~~~~~~~~ill~~H~ 119 (450)
++.++ +++++++++|++|||++ + +|.++++||.++|+ ||+++... +++|+++ ++++ |+|+|++||
T Consensus 4 ~~~~~--~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~--~~i~l~~H~ 76 (369)
T 2f7v_A 4 MTDLL--ASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT--PKYLFNVHL 76 (369)
T ss_dssp CCHHH--HHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC--CSEEEEEEC
T ss_pred hhhhh--HHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC--CeEEEEeee
Confidence 34455 88999999999999999 8 89999999999999 99987642 4689999 8654 789999999
Q ss_pred cCCCCcCcCCC---cccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-c-cchHHHHHc
Q 013076 120 DSLPLQEMVEW---EYKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG-G-GGAHKVLEA 190 (450)
Q Consensus 120 DvVp~~~~~~w---~~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg-~-~Ga~~l~~~ 190 (450)
||||+++ .| ||.. .+||++||||+ |++++++|.+++. ++++|+|+|+++||. + .|+++++++
T Consensus 77 D~vp~~~--~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~~~~~~~EE~~g~~G~~~~~~~ 147 (369)
T 2f7v_A 77 DTVPDSP--HWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAAFLFSSDEEANDPRCIAAFLAR 147 (369)
T ss_dssp CBCCCCS--SCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEEEEEESCTTSSSCCHHHHHHTT
T ss_pred cccCCCC--CCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCCCEEEEEEeCcccCCCcCHHHHHhc
Confidence 9999875 56 4554 46899999998 8999999988865 679999999999994 4 799999987
Q ss_pred ccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCC-CCCcHHHHHHHHHHHHhhhhcccC---
Q 013076 191 GVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQ-HSIDPILAASNVIVSLQHLVSREA--- 266 (450)
Q Consensus 191 ~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~-~g~nAi~~~~~~l~~l~~~~~~~~--- 266 (450)
+. ++|++++.+ +. .+.+ ...++|..+++|+++|+++|+|.|+ .|.|||..+++++.+|+.+..+..
T Consensus 148 ~~--~~d~~i~~e--~~--~~~i----~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~~~~~~~~ 217 (369)
T 2f7v_A 148 GL--PYDAVLVAE--PT--MSEA----VLAHRGISSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHVESLAHAR 217 (369)
T ss_dssp CC--CCSEEEECC--CS--TTCB----BCCBCCEEEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred CC--CCCEEEECC--CC--CCcc----eeecCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhhhhhcccc
Confidence 65 578877643 32 1222 2346799999999999999999999 999999999999999988754321
Q ss_pred -CCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccC
Q 013076 267 -DPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTIN 345 (450)
Q Consensus 267 -~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 345 (450)
++...++++++.|+||.+.|+||++|++.+|+|+++.++.+++.++|+++++.. +++++++.. ...+|++..
T Consensus 218 ~~~~~~~~~~vg~i~gG~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~---~~~~~~~~~ 290 (369)
T 2f7v_A 218 FGGLTGLRFNIGRVDGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFADPA----AAHFEETFR---GPSLPSGDI 290 (369)
T ss_dssp ETTEESCEEEEEEEEECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHHTCSSC----CSEEEEEEE---ECCBSCSSH
T ss_pred cCcccCCceEEEEeecCCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHHHHh----cCceEEEec---cCCCCccCC
Confidence 221127999999999999999999999999999999999999999999887543 456666652 134666666
Q ss_pred C-hHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHH
Q 013076 346 N-NDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAAL 423 (450)
Q Consensus 346 d-~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~ 423 (450)
+ +++++.+++++++.+|.++. ...+|++|+++|.+. +|++ .|||+ ....+|++||+++++++.+++++
T Consensus 291 ~~~~l~~~~~~a~~~~~g~~~~---~~~~g~~D~~~~~~~g~p~v--~~Gpg-----~~~~~H~~~E~~~~~~l~~~~~~ 360 (369)
T 2f7v_A 291 ARAEERRLAARDVADALDLPIG---NAVDFWTEASLFSAGGYTAL--VYGPG-----DIAQAHTADEFVTLAQLQRYVES 360 (369)
T ss_dssp HHHHHHHHHHHHHHHHTTCCBC---CCBSSCCTHHHHHHTTCCEE--ECCSS-----CGGGTTCTTCEEEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCCC---ccccccCcHHHHhhCCCCEE--EECCC-----CccccCCCCceEEHHHHHHHHHH
Confidence 6 78999999999998887653 347899999999988 9976 57753 34579999999999999999999
Q ss_pred HHHHHH
Q 013076 424 HASLAL 429 (450)
Q Consensus 424 ~~~~~~ 429 (450)
|+.++.
T Consensus 361 ~~~~~~ 366 (369)
T 2f7v_A 361 VNRIIN 366 (369)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998875
No 17
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=6.3e-50 Score=393.75 Aligned_cols=336 Identities=15% Similarity=0.143 Sum_probs=269.7
Q ss_pred HHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcC-C-CCceEEEEeeccCCCCc
Q 013076 48 AKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGT-G-EPPFVALRADMDSLPLQ 125 (450)
Q Consensus 48 ~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~-~-~~~~ill~~H~DvVp~~ 125 (450)
+++++ +++++++++|++|||+|++|.++++||.++|+++|++++.. .+|+++++++ + ++|+|+|.+||||||++
T Consensus 6 i~~~~--~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~--~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~ 81 (356)
T 3ct9_A 6 IPTMT--AEAVSLLKSLISIPSISREETQAADFLQNYIEAEGMQTGRK--GNNVWCLSPMFDLKKPTILLNSHIDTVKPV 81 (356)
T ss_dssp HHHHH--HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCCEEEE--TTEEEEECSSCCTTSCEEEEEEECCBCCCC
T ss_pred HhHHH--HHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHCCCeEEEE--eeeEEEEEecCCCCCCeEEEEccccccCCC
Confidence 34444 78999999999999999999999999999999999998765 7899999965 3 36899999999999987
Q ss_pred CcCCC---ccccC-CCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-c-cchHHHHHccccccc
Q 013076 126 EMVEW---EYKSK-IPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG-G-GGAHKVLEAGVLEKV 196 (450)
Q Consensus 126 ~~~~w---~~~~~-~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg-~-~Ga~~l~~~~~~~~~ 196 (450)
+ .| ||.+. +||++||||+ |++++++|+|++.|++.+ ++++|+|+|+++||. + .|++++++++ .++
T Consensus 82 ~--~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~~g~~G~~~~~~~~--~~~ 155 (356)
T 3ct9_A 82 N--GWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLASCEEEVSGKEGIESVLPGL--PPV 155 (356)
T ss_dssp ---------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEEECCGGGTCTTTHHHHGGGS--CCC
T ss_pred C--CCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEeCcccCCccCHHHHHhhC--CCC
Confidence 5 57 46543 5899999998 789999999999999876 889999999999995 4 8999998875 356
Q ss_pred ceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCC-CCCceEE
Q 013076 197 NAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADP-LDSQVVT 275 (450)
Q Consensus 197 d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~-~~~~t~~ 275 (450)
|+++.. ++.. +.+. ..++|..+++|+++|+++|++.| .|+|||..+++++.+|+.+..+..++ ...++++
T Consensus 156 d~~i~~--ep~~--~~i~----~~~~G~~~~~i~~~G~~~Ha~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 226 (356)
T 3ct9_A 156 SFAIVG--EPTE--MQPA----IAEKGLMVLDVTATGKAGHAARD-EGDNAIYKVLNDIAWFRDYRFEKESPLLGPVKMS 226 (356)
T ss_dssp SEEEEC--CSBT--TCCE----EEECCCEEEEEEEECBCCBTTSS-CCBCTTGGGHHHHHHHHHCCCSCCBTTTBSCEEE
T ss_pred CEEEEc--CCCC--ceEE----EeeeEEEEEEEEEECCCcccCCC-CCCCHHHHHHHHHHHHHhhhcccccccCCCCcEE
Confidence 766553 3321 2232 23568999999999999999999 99999999999999999876543333 3568999
Q ss_pred EEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCc--cCChHHHHHH
Q 013076 276 VAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPT--INNNDLHKYF 353 (450)
Q Consensus 276 i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~d~~~~~~~ 353 (450)
++.|+||.+.|+||++|++.+|+|+++.++.+++.++|+++++. +++++. ..+|++ ..|+++++.+
T Consensus 227 vg~i~gG~~~NviP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~-------~~~~~~-----~~~~~~~~~~~~~l~~~~ 294 (356)
T 3ct9_A 227 VTVINAGTQHNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIAC-------DAKARS-----FRLNSSRIDEKHPFVQKA 294 (356)
T ss_dssp EEEEEECSSTTBCCSEEEEEEEEECCTTCCHHHHHHHHHHHCCS-------EEEESC-----SCSCCEECCTTSHHHHHH
T ss_pred eeEEecCCcCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHhhC-------eEEEee-----ccCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999988752 333321 334443 3567788888
Q ss_pred HHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 354 QTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
++++++ + ...+|++|++. ..+|++ .|||+ ....+|++||+++++++.+++++|+.++.+++
T Consensus 295 ~~~~~~-----~----~~~~g~tD~~~--~~~p~v--~~G~g-----~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 355 (356)
T 3ct9_A 295 VKMGRI-----P----FGSPTLSDQAL--MSFASV--KIGPG-----RSSRSHTAEEYIMLKEIEEAIGIYLDLLDGLK 355 (356)
T ss_dssp HHTTCC-----C----EEECSCCGGGG--CCSCEE--ECCSS-----BGGGTTSTTCEEEHHHHHHHHHHHHHHHTTCC
T ss_pred HHHhcC-----C----cccccccchhh--cCCCEE--EECCC-----ccccCcCCCcEEEHHHHHHHHHHHHHHHHHhh
Confidence 766542 1 24678999993 248975 46754 23569999999999999999999999987653
No 18
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=2.5e-49 Score=405.05 Aligned_cols=362 Identities=12% Similarity=0.115 Sum_probs=250.1
Q ss_pred hhHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcch------------HHHHHHHHHHHHhcCCceecccCCceEEEEEc-
Q 013076 40 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQE------------FETSQLIRSELDKMGIKYKHPVAVTGVVGFIG- 106 (450)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e------------~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~- 106 (450)
.++++.+++++++ +++++++++|++|||+|++| .++++|++++|+++||+++..+ |+++.+.
T Consensus 21 m~~~i~~~i~~~~--~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~~---~~~~~~~~ 95 (492)
T 3khx_A 21 MASMWKEKVQQYE--DQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD---HIAGRIEA 95 (492)
T ss_dssp --CTTHHHHHTTH--HHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET---TTEEEEEE
T ss_pred hHHHHHHHHHHhH--HHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEeC---CEEEEEEe
Confidence 4556888999988 99999999999999999877 4899999999999999987542 4444432
Q ss_pred CCCCceEEEEeeccCCCCcCcCCC---cccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 107 TGEPPFVALRADMDSLPLQEMVEW---EYKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 107 ~~~~~~ill~~H~DvVp~~~~~~w---~~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
+..+|+|+|+|||||||+++ .| ||.+ ++||++||||+ |++++++|+|+++|++.+.+++++|+|+|++|||
T Consensus 96 g~~~~~i~l~~H~D~vp~~~--~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 173 (492)
T 3khx_A 96 GKGNDVLGILCHVDVVPAGD--GWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEE 173 (492)
T ss_dssp ECSSCEEEEEEECCCCCCCS--CCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEECCTT
T ss_pred CCCCCEEEEEEeccCCCCCC--CcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcc
Confidence 22358999999999999975 68 5654 57999999998 8999999999999999888899999999999999
Q ss_pred -CccchHHHHHcccccccceEEEeccCCCC------------------------------------------CCce--EE
Q 013076 180 -GGGGAHKVLEAGVLEKVNAIFGLHVDPNL------------------------------------------PIGE--VA 214 (450)
Q Consensus 180 -g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~------------------------------------------~~g~--~~ 214 (450)
++.|+++++++.. .+|+.+..+ ... |... +.
T Consensus 174 ~g~~g~~~~~~~~~--~~~~~~~~d--~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~aiv 249 (492)
T 3khx_A 174 SDWKCTDRYFKTEE--MPTLGFAPD--AEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARV 249 (492)
T ss_dssp CCCCTTSHHHHHSC--CCSEEECSS--CSSCSCCCBCEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEEE
T ss_pred CCCcCHHHHHHhCc--CCCEEEecC--CCccEEEecCcEEEEEEEEeccccccccccceeEEecccccCCcCCchHheEe
Confidence 7799999998643 233332211 100 1110 11
Q ss_pred eec---------------Ccccccce-----EEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHh------hhh------
Q 013076 215 SRP---------------GPLLAGSG-----FFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQ------HLV------ 262 (450)
Q Consensus 215 ~~~---------------g~~~~G~~-----~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~------~~~------ 262 (450)
..+ ...++|.. +++|+++|+++|+|+|+.|+|||..+++++.+|+ .+.
T Consensus 250 ~ept~~~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~ 329 (492)
T 3khx_A 250 LVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRY 329 (492)
T ss_dssp EECSCHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHH
T ss_pred ecccchHHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHHHHHHhcCCCchHHHHHHHHHHh
Confidence 111 12236888 9999999999999999999999999999999886 221
Q ss_pred -c-----------ccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEE
Q 013076 263 -S-----------READPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATV 330 (450)
Q Consensus 263 -~-----------~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 330 (450)
. ......+.+++|++.|++|. |++|++.+|+|+++.++.+++.++|+++++ ..++++++
T Consensus 330 ~~~~~~~~~l~i~~~d~~~G~~t~n~g~i~~g~-----P~~a~~~idiR~~~~~~~~~v~~~i~~~~~----~~g~~~~i 400 (492)
T 3khx_A 330 LFNSDFGEKMGMKFHTDVMGDVTTNIGVITYDN-----ENAGLFGINLRYPEGFEFEKAMDRFANEIQ----QYGFEVKL 400 (492)
T ss_dssp TTTCTTSGGGTCC-------CCEEEEEEEEEET-----TTCCEEEEEEEECTTCCHHHHHHHHHHHHG----GGTEEEEE
T ss_pred hCCCCCccccCCccccCCcCccEEeeeEEEEec-----CCEEEEEEEeeCCCCCCHHHHHHHHHHHHH----HcCCEEEE
Confidence 0 00112467899999999986 999999999999999999999999998875 35666666
Q ss_pred EeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCc
Q 013076 331 DFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYF 410 (450)
Q Consensus 331 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E 410 (450)
... .+++ ....|+++++.+++++++++|.++ .+..++|++|++++.+.+| +|+.. ||+...+|++||
T Consensus 401 ~~~---~~p~-~~~~d~~lv~~l~~a~~~~~G~~~--~~~~~gggtDa~~~~~~v~-----~G~~f--Pg~~~~~H~~dE 467 (492)
T 3khx_A 401 GKV---QPPH-YVDKNDPFVQKLVTAYRNQTNDMT--EPYTIGGGTYARNLDKGVA-----FGAMF--SDSEDLMHQKNE 467 (492)
T ss_dssp EEE---ECCB-CCGGGCHHHHHHHHHHHTTCC--------------------------------------------CCSC
T ss_pred ecc---CCce-ecCCCcHHHHHHHHHHHHHhCCCC--eEEeeehhHHHHHhhCceE-----ECCcC--CCCCCCCCCCcc
Confidence 541 2222 234578899999999999888876 4567899999999986433 55443 555678999999
Q ss_pred ccCCCccHHHHHHHHHHHHHHHhh
Q 013076 411 TLNEDALPYGAALHASLALRYLLE 434 (450)
Q Consensus 411 ~i~~~~l~~~~~~~~~~~~~l~~~ 434 (450)
+++++++.+++++|+.++.+++..
T Consensus 468 ~v~i~~l~~~~~i~~~~l~~l~~~ 491 (492)
T 3khx_A 468 YITKKQLFNATSIYLEAIYSLCVE 491 (492)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999753
No 19
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=1.3e-48 Score=394.38 Aligned_cols=350 Identities=13% Similarity=0.111 Sum_probs=279.9
Q ss_pred HHHHHHHHHHhHcCCCCCc----------chHHHHHHHHHHHHhcCCc-eecccCCceEEEEEcCC---CCceEEEEeec
Q 013076 54 VGWMIGIRRKIHQNPELGY----------QEFETSQLIRSELDKMGIK-YKHPVAVTGVVGFIGTG---EPPFVALRADM 119 (450)
Q Consensus 54 ~~~~~~~l~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvva~~~~~---~~~~ill~~H~ 119 (450)
.+++++++++|++|||+|+ +|.++++||.++|+++|++ ++.+ ..+||+|++++. .+|+|+|+|||
T Consensus 26 ~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~d-~~~nv~a~~~g~~~~~~~~v~l~~H~ 104 (434)
T 3ife_A 26 KEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMD-DNGYVMATLPANTDKDVPVIGFLAHL 104 (434)
T ss_dssp HHHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTSCEEEEECCBSSSCCCCEEEEEEC
T ss_pred HHHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEEC-CCcEEEEEeCCCCCCCCCeEEEEEEc
Confidence 3789999999999999998 5689999999999999997 7754 478999999654 25899999999
Q ss_pred cCCCCcCcCCCcccc----CC----------------------------CCceecccc-------hHHHHHHHHHHHHHH
Q 013076 120 DSLPLQEMVEWEYKS----KI----------------------------PGKMHACGH-------DGHVTMLLGAAKILQ 160 (450)
Q Consensus 120 DvVp~~~~~~w~~~~----~~----------------------------~g~l~GrG~-------kg~~a~~l~a~~~l~ 160 (450)
||||..+ .|++++ .. +|+|||||+ |++++++|+|+++|+
T Consensus 105 DtVp~~~--~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L~ 182 (434)
T 3ife_A 105 DTATDFT--GKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLI 182 (434)
T ss_dssp CBCTTSC--CSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCC--CCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHHH
Confidence 9999743 675543 11 258999995 899999999999999
Q ss_pred hccccCCceEEEEEecCCCCccchHHHHHcccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-
Q 013076 161 EHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA- 239 (450)
Q Consensus 161 ~~~~~~~~~i~~~~~~dEEg~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss- 239 (450)
+.+..++++|+|+|++|||++.|++.+..+. + ++|++++++.. +.|.+.+ .++|..+++|+++|+++||+
T Consensus 183 ~~~~~~~~~i~~if~~~EE~g~Ga~~~~~~~-~-~~d~~~~~d~~---~~g~i~~----~~~G~~~~~i~v~G~~~Hag~ 253 (434)
T 3ife_A 183 HNPQIKHGKIRVAFTPDEEIGRGPAHFDVEA-F-GASFAYMMDGG---PLGGLEY----ESFNAAGAKLTFNGTNTHPGT 253 (434)
T ss_dssp TCTTSCBCCEEEEEESCGGGTCTGGGCCHHH-H-CCSEEEECCCC---STTEEEC----CBCEEEEEEEEEECBCCCGGG
T ss_pred hCCCCCCCCEEEEEECCcccChHHHHhhhhh-c-CCCEEEEecCC---CCCceee----cCCCeEEEEEEEEEEecCCCC
Confidence 9887889999999999999558988875432 2 57888887632 3455543 34799999999999999988
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 013076 240 IPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIG 319 (450)
Q Consensus 240 ~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~ 319 (450)
.|+.|+|||..+++++.+|+.+.... ..+.+++.+++| ..|+||++|++.+|+|+.+.++.+++.++|++++++
T Consensus 254 ~P~~g~nAi~~aa~~i~~l~~~~~~~-----~~~~~~g~i~~g-~~n~iP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~ 327 (434)
T 3ife_A 254 AKNKMRNATKLAMEFNGHLPVEEAPE-----YTEGYEGFYHLL-SLNGDVEQSKAYYIIRDFDRKNFEARKNTIENIVKQ 327 (434)
T ss_dssp CTTTCBCHHHHHHHHHHTSCTTCSGG-----GCCTTCCEEEEE-EEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CcccchhHHHHHHHHHHhcccccCCC-----cceeeeEEEEee-eEeEecCeEEEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 79999999999999999998763111 112223334443 368899999999999999999999999999999998
Q ss_pred HHHhhC-CeEEEEeeccCCCCC-CCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccC
Q 013076 320 QAAVQR-CSATVDFLSKEKPFF-PPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKN 396 (450)
Q Consensus 320 ~~~~~~-~~~~i~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~ 396 (450)
.+..++ +++++++... .+++ ++..+|+++++.+++++++ +|.++. ...++|++|+++|.+. +|+++ +|++.
T Consensus 328 ~~~~~g~~~~~v~~~~~-~~~~~~~~~~d~~l~~~~~~a~~~-~G~~~~--~~~~~ggtD~~~~~~~GiP~~~--~g~g~ 401 (434)
T 3ife_A 328 MQEKYGQDAVVLEMNDQ-YYNMLEKIEPVREIVDIAYEAMKS-LNIEPN--IHPIRGGTDGSQLSYMGLPTPN--IFTGG 401 (434)
T ss_dssp HHHHHCGGGEEEEEEEE-ECCTHHHHGGGTHHHHHHHHHHHH-TTCCCE--ECCBSSCCHHHHHHHTTCCCCE--ECCSE
T ss_pred HHHhcCCceEEEEEeec-ccchhccccCCHHHHHHHHHHHHH-hCCCCE--EeecccCchHHHHhhCCCcEEE--eCCCC
Confidence 887777 5555555211 1211 1346788999999999998 487653 4567899999999988 99876 45432
Q ss_pred CCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 397 ETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 397 ~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
..+|++||+++++++.+++++|+.++.++.+
T Consensus 402 ------~~~H~~~E~i~~~~l~~~~~~~~~~l~~la~ 432 (434)
T 3ife_A 402 ------ENYHGKFEYVSVDVMEKAVQVIIEIARRFEE 432 (434)
T ss_dssp ------ESTTSTTCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred ------CCCcCCceeecHHHHHHHHHHHHHHHHHHhh
Confidence 2699999999999999999999999999875
No 20
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=2.4e-49 Score=390.79 Aligned_cols=336 Identities=15% Similarity=0.130 Sum_probs=273.9
Q ss_pred HHHHHHHHHhHcCCCCC---cchHHHHHHHHHHHHhcCCceecccCCceEEEEEcC---CCCceEEEEeeccCCCCcCcC
Q 013076 55 GWMIGIRRKIHQNPELG---YQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGT---GEPPFVALRADMDSLPLQEMV 128 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s---~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~---~~~~~ill~~H~DvVp~~~~~ 128 (450)
+++++++++|++|||+| ++|.++++||.++|+++|++++.. ..|+++.+.+ +++|+|+|.+||||||. .
T Consensus 6 ~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~--~~~~~~~~~~~~~~~~~~i~l~aH~D~vp~---~ 80 (364)
T 2rb7_A 6 QHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERM--DHDGIPSVMVLPEKGRAGLLLMAHIDVVDA---E 80 (364)
T ss_dssp HHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEE--EETTEEEEEECSBTTEEEEEEEEECCCCCC---C
T ss_pred HHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEe--cCCCceEEEEEcCCCCCeEEEECccCcCCC---C
Confidence 67899999999999999 889999999999999999998764 3678888753 33589999999999986 3
Q ss_pred CCccccC-CCCceecccc---hHHHHHHHHHHHHHHhccccC---Cce--EEEEEecCCC-Cc-cchHHHHHcccccccc
Q 013076 129 EWEYKSK-IPGKMHACGH---DGHVTMLLGAAKILQEHREEL---KGT--VVLVFQPAEE-GG-GGAHKVLEAGVLEKVN 197 (450)
Q Consensus 129 ~w~~~~~-~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~---~~~--i~~~~~~dEE-g~-~Ga~~l~~~~~~~~~d 197 (450)
..||.+. ++|++||||+ |++++++|+|++.|++.+.++ +++ |+|+|+++|| ++ .|++++++++ ++|
T Consensus 81 ~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~~---~~d 157 (364)
T 2rb7_A 81 DDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPLI---RAD 157 (364)
T ss_dssp GGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHHGGGC---EEE
T ss_pred CCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccccCchhhHHHHHhcC---CCC
Confidence 5678754 4899999998 789999999999999887666 568 9999999999 44 7999998865 455
Q ss_pred eEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCC--CCceEE
Q 013076 198 AIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPL--DSQVVT 275 (450)
Q Consensus 198 ~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~--~~~t~~ 275 (450)
+++ +.++++|.+ +.. .++|..+++|+++|+++|++.|+.|.|||..+++++.+|+.+.. .+.. +.++++
T Consensus 158 ~~i--~~d~~~p~~-i~~----~~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~--~~~~~~~~~~~~ 228 (364)
T 2rb7_A 158 YVV--ALDGGNPQQ-VIT----KEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA--EENEDHWHRTVN 228 (364)
T ss_dssp EEE--ECSSSBTTE-EEE----EECEEEEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC--CCCTTCCSCEEE
T ss_pred EEE--EccCCcccc-eEE----EeeeEEEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc--chhhcCCCceEE
Confidence 544 455667777 433 34699999999999999999999999999999999999988732 1112 468999
Q ss_pred EEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHH
Q 013076 276 VAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQT 355 (450)
Q Consensus 276 i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~ 355 (450)
++.|+||.+.|+||++|++.+|+|+++.++.+++.++|+++++. +++... .+++ ....|+++++.+++
T Consensus 229 vg~i~gG~~~NviP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-------~v~~~~----~~~~-~~~~~~~l~~~~~~ 296 (364)
T 2rb7_A 229 LGRIRAGESTNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTVSG-------TVSIVR----TVPV-FLAADSPYTERLLA 296 (364)
T ss_dssp EEEEEECSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHCSS-------EEEEEE----EECC-EECCCCHHHHHHHH
T ss_pred EEEEecCCcCcccCcceEEEEEEeeCCCCCHHHHHHHHHHHhhh-------hEEecc----CCcc-ccCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999998752 333211 2222 12336689999999
Q ss_pred HHHhhcCCccccccCCCcccchHHHHhh-hcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhh
Q 013076 356 VAGDMLDTQKVKVMAPVMGSEDFSFYQE-VMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLE 434 (450)
Q Consensus 356 ~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 434 (450)
+++ .+|. ...|++|+++|.+ .+|++. |||.. ....|++||++++++|.+++++|+.++.+++..
T Consensus 297 ~~~-~~g~-------~~~g~~D~~~~~~~~~p~v~--~Gp~~-----~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~~ 361 (364)
T 2rb7_A 297 LSG-ATAG-------KAHGASDARYLGENGLTGVV--WGAEG-----FNTLHSRDECLHIPSLQSIYDPLMQLAREMEEH 361 (364)
T ss_dssp HHC-CEEE-------EESSCCGGGGTGGGTCCEEE--CCCCC-----TTCTTSTTCEEETTHHHHHHHHHHHHHHHHHC-
T ss_pred HHH-hcCC-------CCCCCchHHHHHhcCCCEEE--ECCCC-----ccccCCCCccccHHHHHHHHHHHHHHHHHHHhh
Confidence 987 4453 1578899999998 489755 77543 213599999999999999999999999999853
No 21
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=1e-47 Score=386.29 Aligned_cols=347 Identities=13% Similarity=0.116 Sum_probs=282.8
Q ss_pred HHHHHHHHHhHcCCCCCc----------chHHHHHHHHHHHHhcCCc-eecccCCceEEEEEcCC---CCceEEEEeecc
Q 013076 55 GWMIGIRRKIHQNPELGY----------QEFETSQLIRSELDKMGIK-YKHPVAVTGVVGFIGTG---EPPFVALRADMD 120 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvva~~~~~---~~~~ill~~H~D 120 (450)
++++++|++|++|||+|+ +|.++++||+++|+++|++ ++.+ ..+||+++++++ ++|+|+|+||||
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~-~~~nvia~~~g~~~~~~~~i~l~aH~D 80 (417)
T 1fno_A 2 DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLS-EKGTLMATLPANVEGDIPAIGFISHVD 80 (417)
T ss_dssp CSHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTCCEEEEECCSSCSCCCCEEEEEECC
T ss_pred hHHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEEC-CCceEEEEECCCCCCCCCceEEEEecc
Confidence 347899999999999998 6889999999999999998 7654 468999999653 358999999999
Q ss_pred CCCCcCcCCCccc--------cC-----------------------CCCceeccc-----c--hHHHHHHHHHHHHHHhc
Q 013076 121 SLPLQEMVEWEYK--------SK-----------------------IPGKMHACG-----H--DGHVTMLLGAAKILQEH 162 (450)
Q Consensus 121 vVp~~~~~~w~~~--------~~-----------------------~~g~l~GrG-----~--kg~~a~~l~a~~~l~~~ 162 (450)
|||+++ .|.++ .. .||++|||| + |++++++|+|++.|++.
T Consensus 81 ~Vp~~~--~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~ 158 (417)
T 1fno_A 81 TSPDFS--GKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGN 158 (417)
T ss_dssp BCTTSC--CSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSS
T ss_pred ccCCCC--CCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhC
Confidence 999865 46432 11 356899999 5 69999999999999988
Q ss_pred cccCCceEEEEEecCCCCccchHHHHHcccccccceEEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCC-CC
Q 013076 163 REELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IP 241 (450)
Q Consensus 163 ~~~~~~~i~~~~~~dEEg~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss-~p 241 (450)
+ .++++|+|+|+++||.+.|++.++++++ ++|+++.++ +. +.+.+.. ..+|..+++|+++|+++|++ .|
T Consensus 159 ~-~~~~~v~~~~~~~EE~g~Ga~~~~~~~~--~~d~~i~~d--~~-~~g~i~~----~~~g~~~~~i~~~G~~~Hs~~~p 228 (417)
T 1fno_A 159 P-IPHGDIKVAFTPDEEVGKGAKHFDVEAF--GAQWAYTVD--GG-GVGELEF----ENFNAASVNIKIVGNNVHPGTAK 228 (417)
T ss_dssp S-CCCCCEEEEEESCGGGTCTTTTCCHHHH--CCSEEEECC--CC-STTBEEC----CBCEEEEEEEEEECBCCCGGGCT
T ss_pred C-CCCCcEEEEEEeccccCCChhhhchhhc--CCCEEEEeC--CC-CcCeeEE----ecCCceeEEEEEEeeccCCCCCc
Confidence 7 7889999999999994488888765543 467777654 32 4565532 35799999999999999999 69
Q ss_pred CCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHH
Q 013076 242 QHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQA 321 (450)
Q Consensus 242 ~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~ 321 (450)
+.|+|||..+++++.+|+.+..+.......++++++.|+|| |++|++.+|+|+.+.++.+++.++|+++++..+
T Consensus 229 ~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG------p~~a~~~~d~R~~~~~~~~~~~~~i~~~~~~~~ 302 (417)
T 1fno_A 229 GVMVNALSLAARIHAEVPADEAPETTEGYEGFYHLASMKGT------VDRAEMHYIIRDFDRKQFEARKRKMMEIAKKVG 302 (417)
T ss_dssp TTCBCHHHHHHHHHHTSCTTSSGGGCCTTCCEEEEEEEEEC------SSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCHHHHHHHHHHhhhccCCcccccccccEEEEEEEeec------cCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887543333344568999999998 999999999999999999999999999999877
Q ss_pred HhhCCe--EEEEeeccCCCCCCC----ccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecc
Q 013076 322 AVQRCS--ATVDFLSKEKPFFPP----TINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGM 394 (450)
Q Consensus 322 ~~~~~~--~~i~~~~~~~~~~~~----~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~ 394 (450)
..++.. +++++. ..+++ ...|+++++.+++++++. |.++. ....+|++|+++|... +|++. +||
T Consensus 303 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~ggtD~~~~~~~gip~v~--~G~ 373 (417)
T 1fno_A 303 KGLHPDCYIELVIE----DSYYNMREKVVEHPHILDIAQQAMRDC-HITPE--MKPIRGGTDGAQLSFMGLPCPN--LFT 373 (417)
T ss_dssp TTCCTTCCEEEEEE----EEECCCHHHHHTSTHHHHHHHHHHHHT-TCCCB--CCCBSSCCHHHHHTTTTCCCCE--ECC
T ss_pred HHcCCCceEEEEEe----ccccchhccccCCCHHHHHHHHHHHHc-CCCce--eccceeccchHhHHhcCCCEEE--EcC
Confidence 666643 555542 22222 356888999999999994 87753 4577899999999987 99875 665
Q ss_pred cCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhhc
Q 013076 395 KNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEF 435 (450)
Q Consensus 395 ~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~ 435 (450)
.. ..+|++||+++++++.+++++|..++.++++..
T Consensus 374 ~~------~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~~~ 408 (417)
T 1fno_A 374 GG------YNYHGKHEFVTLEGMEKAVQVIVRIAELTAKRG 408 (417)
T ss_dssp SE------ESTTSTTCEEEHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CC------CCCCCcccccCHHHHHHHHHHHHHHHHHHHhcC
Confidence 42 248999999999999999999999999998754
No 22
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=5.7e-47 Score=381.62 Aligned_cols=349 Identities=15% Similarity=0.132 Sum_probs=287.5
Q ss_pred HHHhhhhHHHHHHHHHHhHcCCCCC----------cchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC-C-CceEE
Q 013076 47 FAKRQELVGWMIGIRRKIHQNPELG----------YQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG-E-PPFVA 114 (450)
Q Consensus 47 ~~~~~~~~~~~~~~l~~l~~ips~s----------~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~-~-~~~il 114 (450)
+++.+. +++++++++|++|||++ ++|.++++||+++|+++|++++++. .+|++++++++ + +|+|+
T Consensus 3 ~~~~~~--~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~~-~gnv~a~~~g~~~~~~~i~ 79 (423)
T 1z2l_A 3 LITHFR--QAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDE-VGNLYGRLNGTEYPQEVVL 79 (423)
T ss_dssp CHHHHH--HHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEECT-TSCEEEEECCSSEEEEEEE
T ss_pred cccccH--HHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEec-CCcEEEEEcCCCCCCCEEE
Confidence 455555 88999999999999988 6789999999999999999987643 45999999654 3 38999
Q ss_pred EEeeccCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCc------cchHHHH
Q 013076 115 LRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGG------GGAHKVL 188 (450)
Q Consensus 115 l~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~------~Ga~~l~ 188 (450)
|.+||||||.+ +| .+.|++++++|+|+++|++.+.+++++|+|+|+++||++ .|++.+.
T Consensus 80 l~~H~D~Vp~~---g~------------~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~ 144 (423)
T 1z2l_A 80 SGSHIDTVVNG---GN------------LDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIF 144 (423)
T ss_dssp EEEECCCCTTB---CS------------STTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHT
T ss_pred EEEecCCCCCC---Cc------------cCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHH
Confidence 99999999975 22 133789999999999999988889999999999999953 3888877
Q ss_pred H----ccc--------------------c---------cccceEEEeccCCCC-------CCceEEeecCcccccceEEE
Q 013076 189 E----AGV--------------------L---------EKVNAIFGLHVDPNL-------PIGEVASRPGPLLAGSGFFE 228 (450)
Q Consensus 189 ~----~~~--------------------~---------~~~d~~i~~~~~~~~-------~~g~~~~~~g~~~~G~~~~~ 228 (450)
. ++. . .++|+++.+|.+++. +.+.+ ..++|..+++
T Consensus 145 ~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~~-----~~~~g~~~~~ 219 (423)
T 1z2l_A 145 GLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVV-----NAIVGQRRYT 219 (423)
T ss_dssp TCCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEEE-----EEECEEEEEE
T ss_pred cCCCHHHHhhhcCcCCcCHHHHHHHcCCccccccccCCCCceEEEEEEeccCchHHHCCCCeEEE-----eeEecceEEE
Confidence 5 221 1 135677888876541 22222 1356899999
Q ss_pred EEEEecCCCCC-CCC-CCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecC-CCCCCCCCeEEEEEEEecCChhh
Q 013076 229 AVIGGKGGHAA-IPQ-HSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKES 305 (450)
Q Consensus 229 i~v~G~~~Hss-~p~-~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~nviP~~a~~~idiR~~~~~~ 305 (450)
|+++|+++|+| .|+ .|.|||..+++++..|+++..+. ++ .++++++.|+|| .+.|+||++|++.+|+|+++.++
T Consensus 220 i~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~~-~~--~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~~~ 296 (423)
T 1z2l_A 220 VTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRM-GD--PLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAV 296 (423)
T ss_dssp EEEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHHH-CT--TCEEECCCEEEESCCTTEECCEEEEEEEEEESSHHH
T ss_pred EEEEeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHhc-CC--CceEEEEEEeecCCcceeECCEEEEEEEeeCCCHHH
Confidence 99999999999 796 89999999999999998875432 22 578999999997 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhc
Q 013076 306 FTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVM 385 (450)
Q Consensus 306 ~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~ 385 (450)
.+++.++|+++++..+..++++++++. ...+|++.+|+++++.++++++++ |.++. +..++|++|+++|.+.+
T Consensus 297 ~~~i~~~i~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~ggtD~~~~~~~~ 369 (423)
T 1z2l_A 297 LRDFTQQLENDMRAICDEMDIGIDIDL----WMDEEPVPMNKELVATLTELCERE-KLNYR--VMHSGAGHDAQIFAPRV 369 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCEEEEEE----EEEECCEECCHHHHHHHHHHHHHT-TCCEE--EEEESSCCTHHHHTTTS
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEEEEE----ecCCCCccCCHHHHHHHHHHHHHc-CCCeE--EecCCCcccHHHHHhhC
Confidence 999999999999988878888888776 345667778899999999999998 87653 45688999999999889
Q ss_pred CeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhh
Q 013076 386 PGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLE 434 (450)
Q Consensus 386 p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 434 (450)
|++++ |||.. ...+|++||+++++++.+++++|+.++.+++..
T Consensus 370 p~~~~-~~p~~-----~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 412 (423)
T 1z2l_A 370 PTCMI-FIPSI-----NGISHNPAERTNITDLAEGVKTLALMLYQLAWQ 412 (423)
T ss_dssp CEEEE-EECCG-----GGCCSSTTCCCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred CEEEE-EeCCC-----CCCCCCccccCCHHHHHHHHHHHHHHHHHHHhh
Confidence 98654 55432 246999999999999999999999999999864
No 23
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=3.8e-48 Score=394.90 Aligned_cols=358 Identities=15% Similarity=0.085 Sum_probs=289.2
Q ss_pred HHHHHHHHHh-HcCCCC-----------------CcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC-CCceEEE
Q 013076 55 GWMIGIRRKI-HQNPEL-----------------GYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG-EPPFVAL 115 (450)
Q Consensus 55 ~~~~~~l~~l-~~ips~-----------------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~-~~~~ill 115 (450)
++++++|++| ++|||+ +++|.++++||.++|+++||+++.+ ..+|+++++++. ++|+|+|
T Consensus 32 ~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d-~~gnvia~~~g~~~~~~i~l 110 (474)
T 2v8h_A 32 GRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVD-KIGNMFAVYPGKNGGKPTAT 110 (474)
T ss_dssp THHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEB-TTCCEEEEECCSSCCSCEEE
T ss_pred HHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEe-cCceEEEEECCCCCCCeEEE
Confidence 7799999999 999987 3678899999999999999998754 356899999654 4579999
Q ss_pred EeeccCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCc------cchHHHHH
Q 013076 116 RADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGG------GGAHKVLE 189 (450)
Q Consensus 116 ~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~------~Ga~~l~~ 189 (450)
+|||||||++ +| | +.|++++++|+|+++|++.+.+++++|+|+|+++||++ .|++.+.+
T Consensus 111 ~~H~DtVp~~---g~----------~--D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 111 GSHLDTQPEA---GK----------Y--DGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp EECCCCCSSB---CS----------S--TTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCSCSSSSCTTHHHHHHTT
T ss_pred EEecccCCCC---CC----------c--CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCCCCCcccHHHHHh
Confidence 9999999986 34 1 55799999999999999988888999999999999952 38888754
Q ss_pred c---------------------------ccc---------cccceEEEeccCCCCCCc----eEEeecCcccccceEEEE
Q 013076 190 A---------------------------GVL---------EKVNAIFGLHVDPNLPIG----EVASRPGPLLAGSGFFEA 229 (450)
Q Consensus 190 ~---------------------------~~~---------~~~d~~i~~~~~~~~~~g----~~~~~~g~~~~G~~~~~i 229 (450)
. |+. .++++.+.+|.+++...+ ..... ..++|..+++|
T Consensus 176 ~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~~~i~--~~~~G~~~~~i 253 (474)
T 2v8h_A 176 DLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIGIV--TGVQAYNWQKV 253 (474)
T ss_dssp SSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCTTTSCCSEEEEEEECCSSHHHHTTCSEEEE--EEECEEEEEEE
T ss_pred ccCHhhhhhhcccccccCccHHHHHHhcCCcccccccccccchhhheeeeeccCccccccCCcceeE--EeecceEEEEE
Confidence 1 111 245777888876542111 11111 23468999999
Q ss_pred EEEecCCCCC-CCC-CCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecC-CCCCCCCCeEEEEEEEecCChhhH
Q 013076 230 VIGGKGGHAA-IPQ-HSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESF 306 (450)
Q Consensus 230 ~v~G~~~Hss-~p~-~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~nviP~~a~~~idiR~~~~~~~ 306 (450)
+++|+++|+| .|+ .|.|||..+++++.+|+.+..+. .++++++.|+|| .+.|+||++|++.+|+|+++.++.
T Consensus 254 ~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-----~~t~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~ 328 (474)
T 2v8h_A 254 TVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-----NGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSDDVL 328 (474)
T ss_dssp EEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT-----TCEEECCCEEEESCCTTEECSEEEEEEEEEESCHHHH
T ss_pred EEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc-----CCEEEEEEEEecCCCCceeCCEEEEEEEecCCChHHH
Confidence 9999999999 597 89999999999999998875442 579999999998 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh---hCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcC-C-ccccccCCCcccchHHHH
Q 013076 307 TQLKQRIEEVIIGQAAV---QRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLD-T-QKVKVMAPVMGSEDFSFY 381 (450)
Q Consensus 307 ~~~~~~i~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g-~-~~~~~~~~~~g~tD~~~~ 381 (450)
+++.++|+++++..+.. ++++++++. ...+|++..|+++++.++++++++ | . ++ .....+|++|+++|
T Consensus 329 ~~i~~~i~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~d~~l~~~~~~a~~~~-G~~~~~--~~~~~~ggtD~~~~ 401 (474)
T 2v8h_A 329 ATMLKEAAAEFDRLIKINDGGALSYESET----LQVSPAVNFHEVCIECVSRSAFAQ-FKKDQV--RQIWSGAGHDSCQT 401 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCCCEEEEEE----EEEECCEECCHHHHHHHHHHHHHH-SCGGGE--EEEEESSCCTHHHH
T ss_pred HHHHHHHHHHHHHHHhhcccCCcEEEEEE----ecCCCCccCCHHHHHHHHHHHHHc-CCCCcc--eecCCcCCccHHHH
Confidence 99999999999887655 777777766 345566778899999999999998 8 6 54 34568899999999
Q ss_pred hhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 013076 382 QEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLEFGPEISLPEGNYRD 448 (450)
Q Consensus 382 ~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 448 (450)
.+.+|+++ .|||. ....+|+|||+++++++.+++++|+.++.+++.....++++.+|++.|
T Consensus 402 ~~~~P~~~-~fgp~-----~~~~~H~p~E~i~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 462 (474)
T 2v8h_A 402 APHVPTSM-IFIPS-----KDGLSHNYYEYSSPEEIENGFKVLLQAIINYDNYRVIRGHQFPGDDDD 462 (474)
T ss_dssp TTTSCEEE-EEECC-----GGGCCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred HhhCCEEE-EEeCC-----CCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHhHHHhhccCCCCccc
Confidence 98899854 35543 234699999999999999999999999999998766667777777655
No 24
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=4.1e-46 Score=373.45 Aligned_cols=340 Identities=20% Similarity=0.227 Sum_probs=284.8
Q ss_pred HHHHHHHHHhHcCCCC----------CcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC-C-CceEEEEeeccCC
Q 013076 55 GWMIGIRRKIHQNPEL----------GYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG-E-PPFVALRADMDSL 122 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~-~-~~~ill~~H~DvV 122 (450)
+++++++++|++|||. |++|.++++||.++|+++|++++.+. .+|++|+++++ + +|+|+|.+|||+|
T Consensus 5 ~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d~-~gnv~a~~~g~~~~~~~i~l~aH~D~v 83 (408)
T 3n5f_A 5 ERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDA-AGNLIGRKEGTNPDATVVLVGSHLDSV 83 (408)
T ss_dssp HHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEECT-TCCEEEEECCSSTTSCEEEEEEESCCC
T ss_pred HHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEcC-CCCEEEEecCCCCCCCEEEEEecCCCC
Confidence 6789999999999993 78999999999999999999988643 46999999764 3 6999999999999
Q ss_pred CCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCc------cchHHHHH-------
Q 013076 123 PLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGG------GGAHKVLE------- 189 (450)
Q Consensus 123 p~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEEg~------~Ga~~l~~------- 189 (450)
|.+. . .+.|++++++|.+++.|++.+.+++++|.|+|+++||++ .|++.++.
T Consensus 84 ~~~g------------~---~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~ 148 (408)
T 3n5f_A 84 YNGG------------C---FDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEAL 148 (408)
T ss_dssp TTBC------------S---STTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGGG
T ss_pred CCCC------------c---cCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHHh
Confidence 9641 1 134689999999999999988789999999999999942 48888872
Q ss_pred -----cc-----------c----c-----c--ccceEEEeccCCC-------CCCceEEeecCcccccceEEEEEEEecC
Q 013076 190 -----AG-----------V----L-----E--KVNAIFGLHVDPN-------LPIGEVASRPGPLLAGSGFFEAVIGGKG 235 (450)
Q Consensus 190 -----~~-----------~----~-----~--~~d~~i~~~~~~~-------~~~g~~~~~~g~~~~G~~~~~i~v~G~~ 235 (450)
+| + + + ++|+++.+|++++ .+.+.+. .++|..+++|+++|++
T Consensus 149 ~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~~-----~~~g~~~~~i~v~G~~ 223 (408)
T 3n5f_A 149 ECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVT-----GIAGLIWVKFTIEGKA 223 (408)
T ss_dssp SCBCTTCCBHHHHHHHTTCCGGGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEEE-----EECEEEEEEEEEECCC
T ss_pred hccCCCCCCHHHHHHHhCCChhhhhhcccCccCccEEEEEeeccchhHHHcCCCeEEEE-----EeccceEEEEEEEEEc
Confidence 11 1 1 1 5678888888764 1223221 2579999999999999
Q ss_pred CCC-CCC-CCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecC-CCCCCCCCeEEEEEEEecCChhhHHHHHHH
Q 013076 236 GHA-AIP-QHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQR 312 (450)
Q Consensus 236 ~Hs-s~p-~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~nviP~~a~~~idiR~~~~~~~~~~~~~ 312 (450)
+|+ +.| +.|.|||..+++++.+|+.+. +..+ ..+++++.|+|| .+.|+||++|++.+|+|+.+.++.+++.++
T Consensus 224 ~Hags~P~~~g~nAi~~aa~~i~~l~~~~-~~~~---~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~ 299 (408)
T 3n5f_A 224 EHAGATPMSLRRDPMAAAAQIIIVIEEEA-RRTG---TTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKA 299 (408)
T ss_dssp EETTTSCTTTCCCHHHHHHHHHHHHHHHH-HHHS---SCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHHHHHHHHHH
T ss_pred CcCCCCccccccCHHHHHHHHHHHHHHHH-HhcC---CcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHH
Confidence 999 589 589999999999999999876 3222 689999999997 899999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEe
Q 013076 313 IEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFL 392 (450)
Q Consensus 313 i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~ 392 (450)
|+++++..+..+++++++++ ...+|++.+|+++++.++++++++ |.++. ....+|++|+++|.+.+|+++++.
T Consensus 300 i~~~~~~~a~~~g~~~~i~~----~~~~p~~~~d~~l~~~~~~a~~~~-g~~~~--~~~~~ggtD~~~~~~~iP~~~~~~ 372 (408)
T 3n5f_A 300 IAVRAETIAKERNVRVTTER----LQEMPPVLCSDEVKRAAEAACQKL-GYPSF--WLPSGAAHDSVQLAPICPIGMIFV 372 (408)
T ss_dssp HHHHHHHHHHHHTCEEEEEE----EEEECCEECCHHHHHHHHHHHHHH-TCCCC--EEEESSCCTTTTTTTTSCEEEEEE
T ss_pred HHHHHHHHHHHhCCeEEEEE----ecCCCCcCCCHHHHHHHHHHHHHc-CCCcc--cCCCcCchHHHHHHHHCCEEEEEe
Confidence 99999998888899998887 456677788999999999999998 87653 345779999999998899877665
Q ss_pred cccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 393 GMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 393 G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
|... ..+|+|||+++++++..++++|+.++.++.
T Consensus 373 ~~~~------~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 406 (408)
T 3n5f_A 373 RSQD------GVSHSPAEWSTKEDCAAGAEVLYHTVWQLA 406 (408)
T ss_dssp CCGG------GCCSSTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCC------CCCCCccccCCHHHHHHHHHHHHHHHHHHh
Confidence 5432 359999999999999999999999998875
No 25
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=100.00 E-value=7.1e-46 Score=379.90 Aligned_cols=346 Identities=16% Similarity=0.181 Sum_probs=272.7
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC----CCceEEEEeeccCCCCcCcC--
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG----EPPFVALRADMDSLPLQEMV-- 128 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~----~~~~ill~~H~DvVp~~~~~-- 128 (450)
+++++++++|++|||+|++|.++++||.++|+++|++++.+. .+|++++++++ ++|+|+|+|||||||.++..
T Consensus 11 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~ 89 (487)
T 2qyv_A 11 KLLWQWFDQICAIPHPSYKEEQLAQFIINWAKTKGFFAERDE-VGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTN 89 (487)
T ss_dssp HHHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHTTCEEEECT-TCCEEEEECCCTTCTTBCCEEEEEESCBCCC------
T ss_pred HHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCc
Confidence 779999999999999999999999999999999999987653 57999999652 35899999999999997653
Q ss_pred -CCc---ccc-CCCCceecccc------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHccccccc
Q 013076 129 -EWE---YKS-KIPGKMHACGH------DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKV 196 (450)
Q Consensus 129 -~w~---~~~-~~~g~l~GrG~------kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~ 196 (450)
+|. |.. +.||++||||+ |++++++|.+++ +.+ .++++|.|+|+++|| |+.|++.+++++. ++
T Consensus 90 ~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~---~~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~~ 163 (487)
T 2qyv_A 90 HNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLE---SND-IAHPELEVLLTMTEERGMEGAIGLRPNWL--RS 163 (487)
T ss_dssp ----CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHH---CSS-SCCSSEEEEEESCTTTTCHHHHTCCSSCC--CC
T ss_pred cccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHH---hCC-CCCCCEEEEEEeccccCCHHHHHHHHhcc--CC
Confidence 674 543 46899999998 488999888875 333 477999999999999 6689999887653 36
Q ss_pred ceEEEeccCCCCCCceEE--eecC------------cccccceEEEEEEEe-cCCCCCCC-CCC-CcHHHHHHHHHHHHh
Q 013076 197 NAIFGLHVDPNLPIGEVA--SRPG------------PLLAGSGFFEAVIGG-KGGHAAIP-QHS-IDPILAASNVIVSLQ 259 (450)
Q Consensus 197 d~~i~~~~~~~~~~g~~~--~~~g------------~~~~G~~~~~i~v~G-~~~Hss~p-~~g-~nAi~~~~~~l~~l~ 259 (450)
|+++..+.+ +.+.+. .+.+ ..++| .+++|+++| +++|||.| +.| .|||..+++++.+|+
T Consensus 164 d~~~~~d~~---~~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~ 239 (487)
T 2qyv_A 164 EILINTDTE---ENGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQ 239 (487)
T ss_dssp SEEEECCCC---CTTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHH
T ss_pred CEEEEEccC---CCCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccCCccCCcccccCCCCHHHHHHHHHHHHh
Confidence 777765432 223332 1211 13456 889999999 89999986 776 699999999999998
Q ss_pred hhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEE----------------------------------------e
Q 013076 260 HLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTF----------------------------------------R 299 (450)
Q Consensus 260 ~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idi----------------------------------------R 299 (450)
.+. ...+++++.|+||.+.|+||++|++.+++ |
T Consensus 240 ~~~-------~~~~~~v~~i~gG~~~NvIP~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 312 (487)
T 2qyv_A 240 QNQ-------PHFDFTLANIRGGSIRNAIPRESVATLVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQ 312 (487)
T ss_dssp HHC-------TTCCEEEEEEEEESCTTBCCCCEEEEEEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCCSE
T ss_pred hcc-------CCCcEEEEEEeCCCcCcccCCceEEEEEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecccccc
Confidence 873 24579999999999999999999999999 8
Q ss_pred cCChhhHHHHHHHHHHH---------------------------------------------------HHHHHHhhCCeE
Q 013076 300 AFSKESFTQLKQRIEEV---------------------------------------------------IIGQAAVQRCSA 328 (450)
Q Consensus 300 ~~~~~~~~~~~~~i~~~---------------------------------------------------~~~~~~~~~~~~ 328 (450)
+.|.++.+.+.+.|+++ ++..+..+++++
T Consensus 313 ~~~~~~~~~i~~~i~~~~~gv~~~~~~~~~~~~~s~nl~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~~~ 392 (487)
T 2qyv_A 313 VFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSLSIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQGNI 392 (487)
T ss_dssp EECHHHHHHHHHHHHHSCCEEEEECSSSTTCEEEEEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTCEE
T ss_pred ccCHHHHHHHHHHHHhCCCcceeeccccCCceEeccceEEEEEcCCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCceE
Confidence 88888888888887765 334555667777
Q ss_pred EEEeeccCCCCCCCcc--CChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeE-EEEecccCCCCCCCCCC
Q 013076 329 TVDFLSKEKPFFPPTI--NNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGY-FFFLGMKNETLGKVESI 405 (450)
Q Consensus 329 ~i~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~-~~~~G~~~~~pg~~~~~ 405 (450)
++.. .+|++. .|+++++.+++++++++|.++. +...+|++|+++|.+.+|.+ ++.|||.. ..+
T Consensus 393 ~~~~------~~p~~~~~~d~~l~~~~~~~~~~~~G~~~~--~~~~~gg~D~~~~~~~~pg~~~v~~Gp~~------~~~ 458 (487)
T 2qyv_A 393 NLSG------DYPGWEPQSHSDILDLTKTIYAQVLGTDPE--IKVIHAGLECGLLKKIYPTIDMVSIGPTI------RNA 458 (487)
T ss_dssp EEEE------EECCBCCCSCCHHHHHHHHHHHHHHSSCCE--EEEESSCCTHHHHHHHCTTSEEEECCCCE------EST
T ss_pred EECC------CCCCCCCCCCCHHHHHHHHHHHHHhCCCCe--EEEEeccccHHHHHhhCCCCCEEEECCCC------CCC
Confidence 6643 234443 4788999999999998898763 45688999999999875543 45678642 469
Q ss_pred CCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 406 HSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 406 H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
|+|||+++++++.+++++|+.++.+++
T Consensus 459 H~~~E~v~~~~l~~~~~~~~~~l~~l~ 485 (487)
T 2qyv_A 459 HSPDEKVHIPAVETYWKVLTGILAHIP 485 (487)
T ss_dssp TSTTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998875
No 26
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=3.8e-45 Score=373.21 Aligned_cols=359 Identities=15% Similarity=0.135 Sum_probs=276.2
Q ss_pred HHHHHHhhhhHHHHHHHHHHhHcCCCCCcch------------HHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCc
Q 013076 44 LLNFAKRQELVGWMIGIRRKIHQNPELGYQE------------FETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPP 111 (450)
Q Consensus 44 ~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e------------~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~ 111 (450)
+.+++++++ +++++++++|++|||+|++| .++++||.++|+++||+++.. +..++++.++.+ +|
T Consensus 5 ~~~~~~~~~--~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~-~~~~~~~~~g~~-~~ 80 (470)
T 1lfw_A 5 FKELAEAKK--DAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF-ANYAGRVNFGAG-DK 80 (470)
T ss_dssp HHHHHHTTH--HHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE-TTTEEEEEECCC-SS
T ss_pred HHHHHHHhH--HHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEe-cCeEEEEEeCCC-CC
Confidence 567788877 99999999999999999876 689999999999999998754 346788888433 58
Q ss_pred eEEEEeeccCCCCcCcCCC---ccccC--CCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc
Q 013076 112 FVALRADMDSLPLQEMVEW---EYKSK--IPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGG 182 (450)
Q Consensus 112 ~ill~~H~DvVp~~~~~~w---~~~~~--~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~ 182 (450)
+|+|+|||||||+++ +| ||.+. +||+|||||+ |++++++|+|+++|++.+.+++++|+|+|+++|| ++.
T Consensus 81 ~i~l~~H~D~vp~~~--~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~EE~g~~ 158 (470)
T 1lfw_A 81 RLGIIGHMDVVPAGE--GWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWV 158 (470)
T ss_dssp EEEEEEECCBCCCCS--CCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEEESCTTTTCH
T ss_pred eEEEEEeecccCCCC--CccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCcccCCc
Confidence 999999999999875 67 56654 6999999996 7999999999999999888899999999999999 668
Q ss_pred chHHHHHccccc----ccce----EEEec--------cCCCCCCce---EEeecCc------------------------
Q 013076 183 GAHKVLEAGVLE----KVNA----IFGLH--------VDPNLPIGE---VASRPGP------------------------ 219 (450)
Q Consensus 183 Ga~~l~~~~~~~----~~d~----~i~~~--------~~~~~~~g~---~~~~~g~------------------------ 219 (450)
|++.+++++... .+|. +++.+ ..+....|. .....|.
T Consensus 159 G~~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~ 238 (470)
T 1lfw_A 159 GIDYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKNDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLA 238 (470)
T ss_dssp HHHHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECCCCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHH
T ss_pred cHHHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEccCCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHH
Confidence 999999864321 1232 22211 100000000 0000000
Q ss_pred --------ccccce-----EEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHh------hhh---ccc------------
Q 013076 220 --------LLAGSG-----FFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQ------HLV---SRE------------ 265 (450)
Q Consensus 220 --------~~~G~~-----~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~------~~~---~~~------------ 265 (450)
..+|.+ +++|+++|+++|++.|+.|.||+..+++++..|+ .+. .+.
T Consensus 239 ~~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 318 (470)
T 1lfw_A 239 YESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFYGKKLGI 318 (470)
T ss_dssp HHHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCTTSTTTTC
T ss_pred HHHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCCcccccCC
Confidence 124554 8999999999999999999999999999998875 221 110
Q ss_pred --CC-CCCCceEEEEEEecCCCCCCCCCe-EEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCC
Q 013076 266 --AD-PLDSQVVTVAKFQGGGAFNVIPDS-VLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFP 341 (450)
Q Consensus 266 --~~-~~~~~t~~i~~i~gG~~~nviP~~-a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 341 (450)
.+ ..+.+++|++.|++ +|++ |++.+|+|+++.++.+++.++|+++++. + +++++ ...+|
T Consensus 319 ~~~~~~~~~~t~~~g~i~~------~p~~~a~~~~diR~~~~~~~~~i~~~i~~~~~~-----g--~~v~~----~~~~~ 381 (470)
T 1lfw_A 319 FHHDDLMGDLASSPSMFDY------EHAGKASLLNNVRYPQGTDPDTMIKQVLDKFSG-----I--LDVTY----NGFEE 381 (470)
T ss_dssp CCEETTTEECEEEEEEEEE------ETTSCEEEEEEEEECTTCCHHHHHHHHHHHHTT-----T--EEEEC----SCCBC
T ss_pred cccccccccceEEEEEEEE------cCCceEEEEEEEecCCCCCHHHHHHHHHHHhcC-----C--eEEEE----EeCCC
Confidence 01 12456889998875 6999 9999999999999999999999998763 4 44444 34455
Q ss_pred Ccc--CChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHH
Q 013076 342 PTI--NNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPY 419 (450)
Q Consensus 342 ~~~--~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~ 419 (450)
++. .|+++++.+++++++++|.++. +..++|++|++++. |++ .||+.. ||+...+|+|||+++++++.+
T Consensus 382 ~~~~~~d~~l~~~~~~a~~~~~g~~~~--~~~~~g~~d~~~~~---~~v--~~G~~~--pg~~~~~H~~~E~i~~~~l~~ 452 (470)
T 1lfw_A 382 PHYVPGSDPMVQTLLKVYEKQTGKPGH--EVVIGGGTYGRLFE---RGV--AFGAQP--ENGPMVMHAANEFMMLDDLIL 452 (470)
T ss_dssp CEECCTTCHHHHHHHHHHHHHHCCCCC--EEEESSCCGGGGST---TCE--ECCEEC--TTCCCCTTSTTCEEEHHHHHH
T ss_pred ceeeCCCCHHHHHHHHHHHHHcCCCCc--eeeecCHhHHHhCC---CeE--EECCCC--CCCCCCCCCCCcceEHHHHHH
Confidence 553 4788999999999997787653 34678999999885 653 467654 455577999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 013076 420 GAALHASLALRYLLE 434 (450)
Q Consensus 420 ~~~~~~~~~~~l~~~ 434 (450)
++++|+.++.+++..
T Consensus 453 ~~~~~~~~~~~l~~~ 467 (470)
T 1lfw_A 453 SIAIYAEAIYELTKD 467 (470)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999999864
No 27
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=100.00 E-value=1.6e-45 Score=376.53 Aligned_cols=344 Identities=15% Similarity=0.160 Sum_probs=267.5
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC----CCceEEEEeeccCCCCcCcC--
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG----EPPFVALRADMDSLPLQEMV-- 128 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~----~~~~ill~~H~DvVp~~~~~-- 128 (450)
+++++++++|++|||+|++|.++++||.++|+++|++++.+. .+|++++++++ ++|+|+|+|||||||+++..
T Consensus 14 ~~~~~~~~~L~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~-~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~ 92 (490)
T 3mru_A 14 APLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRDP-TGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTD 92 (490)
T ss_dssp HHHHHHHHHHHHSCCBTTCCTTHHHHHHHHHHHTTCEEEECT-TCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSC
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCEEEEcC-CCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcc
Confidence 779999999999999999999999999999999999988643 57999999752 36899999999999997643
Q ss_pred -CCc---ccc-CCCCceecccc------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHccccccc
Q 013076 129 -EWE---YKS-KIPGKMHACGH------DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKV 196 (450)
Q Consensus 129 -~w~---~~~-~~~g~l~GrG~------kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~ 196 (450)
+|. |.. +++|++||||+ |+++|++|+++ ++. ..++++|.|+|++||| |+.|++.++++.. +.
T Consensus 93 ~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l---~~~-~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~~ 166 (490)
T 3mru_A 93 HDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVL---ASK-EIKHGPIEVLLTIDEEAGMTGAFGLEAGWL--KG 166 (490)
T ss_dssp CCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHH---HCS-SCCCCSEEEEEESCSSSTTGGGGTCCSSSC--CS
T ss_pred cccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHH---HhC-CCCCCCEEEEEEcccccccHhHHHhhhccc--CC
Confidence 685 443 46899999998 47788887665 333 3568999999999999 6689999876532 45
Q ss_pred ceEEEeccCCCCCCceE--Eee------------cCcccccceEEEEEEEe-cCCCCC-CCCCCC-cHHHHHHHHHHHHh
Q 013076 197 NAIFGLHVDPNLPIGEV--ASR------------PGPLLAGSGFFEAVIGG-KGGHAA-IPQHSI-DPILAASNVIVSLQ 259 (450)
Q Consensus 197 d~~i~~~~~~~~~~g~~--~~~------------~g~~~~G~~~~~i~v~G-~~~Hss-~p~~g~-nAi~~~~~~l~~l~ 259 (450)
++++.++.+ +.|.+ ++. ....++|..+++|+++| +++|++ .|+.|+ |||..+++++..|+
T Consensus 167 ~~~~~~d~~---~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~ 243 (490)
T 3mru_A 167 DILLNTDSE---QEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHA 243 (490)
T ss_dssp SEEEECCCC---CTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHT
T ss_pred CEEEEcCCC---CCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCCcccccccccCCcCHHHHHHHHHHHHH
Confidence 777765532 12221 100 02356799999999999 999999 599999 99999999999987
Q ss_pred hhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHH------------------
Q 013076 260 HLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQA------------------ 321 (450)
Q Consensus 260 ~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~------------------ 321 (450)
+. .+++++.|+||.+.|+||++|++.+++|....+..+++.+++.+.++...
T Consensus 244 ~~----------~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 313 (490)
T 3mru_A 244 QE----------LDLRLVEFRGGSLRNAIPREAFVTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDA 313 (490)
T ss_dssp TT----------TTCEEEEEEECSCTTEECCCEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEECCCCC
T ss_pred hc----------CcEEEEEEECCCCCcccCCccEEEEEECcccHHHHHHHHHHHHHHHHHHhhccCCCeEEEEEecCCcc
Confidence 62 36889999999999999999999998887666655555555554443221
Q ss_pred --------------------------------------------------------------------------HhhCCe
Q 013076 322 --------------------------------------------------------------------------AVQRCS 327 (450)
Q Consensus 322 --------------------------------------------------------------------------~~~~~~ 327 (450)
...|.+
T Consensus 314 ~~~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~~S~n~gv~~~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~ 393 (490)
T 3mru_A 314 QVFAIADQQRFIAALNACPNGVMRMSDEVEGVVETSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQ 393 (490)
T ss_dssp CEECHHHHHHHHHHHHHSCCEEEEECTTTTSCEEEEEEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCE
T ss_pred ccCCHHHHHHHHHHHHHCCCccceeccccCCCeeEEEEEEEEEEeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCe
Confidence 122334
Q ss_pred EEEEeeccCCCCCCCcc--CChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhhcCeE-EEEecccCCCCCCCCC
Q 013076 328 ATVDFLSKEKPFFPPTI--NNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGY-FFFLGMKNETLGKVES 404 (450)
Q Consensus 328 ~~i~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~-~~~~G~~~~~pg~~~~ 404 (450)
+++. ..+|++. .|+++++.+.+++++++|.++ ....++|++|++.|.+.+|.+ ++.|||.. ..
T Consensus 394 ~~~~------~~~p~~~~~~d~~lv~~l~~a~~~~~G~~~--~~~~~ggg~d~~~~~~~~p~~~~v~fGp~~------~~ 459 (490)
T 3mru_A 394 IEFS------GAYPGWKPDADSEIMAIFRDMYEGIYGHKP--NIMVIHAGLECGLFKEPYPNMDMVSFGPTI------KF 459 (490)
T ss_dssp EEEE------EEECCBCCCTTCHHHHHHHHHHHTTSSSCC--CCEEESSCCHHHHTTSSCTTCEEEECCCCE------ES
T ss_pred EEec------CCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--eEEEEEecHHHHHHHHhCCCCCEEEECCCC------CC
Confidence 3332 2344443 467899999999999999876 356789999999999887752 45678754 35
Q ss_pred CCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 405 IHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 405 ~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
+|+|||+++++++.+++++|..++.++.
T Consensus 460 ~H~p~E~v~i~~l~~~~~~l~~~l~~l~ 487 (490)
T 3mru_A 460 PHSPDEKVKIDTVQLFWDQMVALLEAIP 487 (490)
T ss_dssp TTSTTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCccccHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999988763
No 28
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=100.00 E-value=1.2e-33 Score=266.64 Aligned_cols=248 Identities=15% Similarity=0.211 Sum_probs=190.3
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecc--cCCceEEEEEcCCCCceEEEEeeccCCCCcCcCCC--
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP--VAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEW-- 130 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w-- 130 (450)
+++++++++|++|||+|++|.++++||+++|+++|++++.. .+.+|++++++. ++|+|+|+|||||||+++.+.|
T Consensus 6 ~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~vp~~~~~~w~~ 84 (268)
T 3t68_A 6 SPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGT-QSPLFVFAGHTDVVPAGPLSQWHT 84 (268)
T ss_dssp CHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEECS-SSCEEEEEEECCBCCCCCGGGCSS
T ss_pred HHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEeCC-CCCeEEEEccccccCCCCcccCCC
Confidence 67899999999999999999999999999999999998753 246799999943 3589999999999999887789
Q ss_pred -ccc-cCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-cchHHHHHccc--ccccceEEE
Q 013076 131 -EYK-SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG-GGAHKVLEAGV--LEKVNAIFG 201 (450)
Q Consensus 131 -~~~-~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~-~Ga~~l~~~~~--~~~~d~~i~ 201 (450)
||. .+++|++||||+ |++++++|.|+++|++.+.+++++|.|+|+++|| ++ .|++.+++... ..++|++|+
T Consensus 85 ~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (268)
T 3t68_A 85 PPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIV 164 (268)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEE
Confidence 455 356899999998 8999999999999998877788999999999999 55 49999887531 235677776
Q ss_pred eccCCCCCCc-eEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEe
Q 013076 202 LHVDPNLPIG-EVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQ 280 (450)
Q Consensus 202 ~~~~~~~~~g-~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~ 280 (450)
.++......+ .+.. ..+|.
T Consensus 165 ~ept~~~~~~~~i~~----g~~G~-------------------------------------------------------- 184 (268)
T 3t68_A 165 GEPSSTLAVGDVVKN----GRRGG-------------------------------------------------------- 184 (268)
T ss_dssp CSCCBSSSTTSEEEE----CCGGG--------------------------------------------------------
T ss_pred eCCCCCccCCceeEE----ecCCC--------------------------------------------------------
Confidence 5332111111 1100 01122
Q ss_pred cCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhh
Q 013076 281 GGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDM 360 (450)
Q Consensus 281 gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 360 (450)
|...+++++++.+.+++++.
T Consensus 185 ------------------------------------------------------------p~~~~~~~l~~~l~~a~~~~ 204 (268)
T 3t68_A 185 ------------------------------------------------------------GFLTDTGELLAAVVAAVEEV 204 (268)
T ss_dssp ------------------------------------------------------------GTSCCCCHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------cccCCchHHHHHHHHHHHHH
Confidence 00112346899999999985
Q ss_pred cCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 361 LDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 361 ~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
.|.++. ....+|++|++++.+. +|++. ||+.. ..+|+++|+++++++.++++++.+++.++++
T Consensus 205 ~gi~~~--~~~sgggtD~~~~~~~g~p~~~--~~~~~------~~~Hs~~E~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 205 NHQAPA--LLTTGGTSDGRFIAQMGAQVVE--LGPVN------ATIHKVNECVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp HSSCCE--EESSCCCHHHHHHHHHTCEEEE--CCSBC------TTTTSTTCEEEHHHHHHHHHHHHHHHHHHHC
T ss_pred hCCCcE--EecCccccHHHHHHhcCCCEEE--EeeCC------CCCCCccccccHHHHHHHHHHHHHHHHHHhC
Confidence 587764 3457799999999987 55444 56543 3479999999999999999999999999874
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=100.00 E-value=2.4e-32 Score=257.71 Aligned_cols=249 Identities=18% Similarity=0.236 Sum_probs=187.2
Q ss_pred HHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecc--cCCceEEEEEcCCCCceEEEEeeccCCCCcCcCCCc
Q 013076 54 VGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP--VAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWE 131 (450)
Q Consensus 54 ~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~ 131 (450)
.+++++++++|++|||+|++|.++++||+++|+++||+++.. .+.+|++++++. ++|+|+|+|||||||+++.+.|.
T Consensus 5 ~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~vp~~~~~~w~ 83 (269)
T 4h2k_A 5 KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGT-SEPVIAFAGHTDVVPTGDENQWS 83 (269)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEECS-SSCEEEEEEECCBCCCCCGGGCS
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEeCC-CCCEEEEEeeecccCCCCccccc
Confidence 378999999999999999999999999999999999998753 246899999843 45899999999999998877884
Q ss_pred ---ccc-CCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-cchHHHHHccc--ccccceEE
Q 013076 132 ---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG-GGAHKVLEAGV--LEKVNAIF 200 (450)
Q Consensus 132 ---~~~-~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~-~Ga~~l~~~~~--~~~~d~~i 200 (450)
|.+ +++|++||||+ |++++++|.|+++|++.+.+++++|.|+|+++|| ++ .|++.+++... ..++|+++
T Consensus 84 ~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i 163 (269)
T 4h2k_A 84 SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM 163 (269)
T ss_dssp SCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhcCCCCCEEE
Confidence 553 45899999998 7999999999999998877788999999999999 44 39999887421 13567777
Q ss_pred EeccCCCCCCc-eEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEE
Q 013076 201 GLHVDPNLPIG-EVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKF 279 (450)
Q Consensus 201 ~~~~~~~~~~g-~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i 279 (450)
..++......+ .+. . ..+|.
T Consensus 164 ~~Ept~~~~~~~~i~--~--g~~G~------------------------------------------------------- 184 (269)
T 4h2k_A 164 VGEPSSAKNLGDVVK--N--GRRGG------------------------------------------------------- 184 (269)
T ss_dssp ECCCCBSSSTTSEEE--C--SCTTC-------------------------------------------------------
T ss_pred EECCCCCCcCCceeE--E--ecccc-------------------------------------------------------
Confidence 64321111001 110 0 01111
Q ss_pred ecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHh
Q 013076 280 QGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGD 359 (450)
Q Consensus 280 ~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 359 (450)
| + . ..++++++.+.+++++
T Consensus 185 ---------------------------------------------G------~----~------~~~~~l~~~l~~aa~~ 203 (269)
T 4h2k_A 185 ---------------------------------------------G------F----L------TKPGKLLDSITSAIEE 203 (269)
T ss_dssp ---------------------------------------------C----------------------HHHHHHHHHHHH
T ss_pred ---------------------------------------------c------c----c------CCCcHHHHHHHHHHHH
Confidence 0 1 0 0124588999988888
Q ss_pred hcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 360 MLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 360 ~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
..|.++. ....+|++|++++... +|++. ||+.. ..+|+++|+++++++.+++++|..++.++++
T Consensus 204 ~~gi~~~--~~~~gggtDa~~~~~~g~p~~~--~~~~~------~~~Hs~~E~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 204 TIGITPK--AETGGGTSDGRFIALMGAEVVE--FGPLN------STIHKVNECVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp HHSCCCE--EECC--CHHHHHHHTTTCEEEE--CCSBC------TTTTSTTCEEEHHHHHHHHHHHHHHHHHHC-
T ss_pred HhCCCCE--EecCCCCchHHHHHhhCCCEEE--EEeCC------CCCcCCcccccHHHHHHHHHHHHHHHHHHhh
Confidence 4487764 3467899999999877 55544 56543 3479999999999999999999999999874
No 30
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.94 E-value=9.2e-27 Score=209.23 Aligned_cols=170 Identities=12% Similarity=0.114 Sum_probs=133.7
Q ss_pred HHHHHHHHHhHcCCCCCc--chHHHHHHHHHHHHhcCCceeccc---CCceEEEEEcCC-C-CceEEEEeeccCCCCcCc
Q 013076 55 GWMIGIRRKIHQNPELGY--QEFETSQLIRSELDKMGIKYKHPV---AVTGVVGFIGTG-E-PPFVALRADMDSLPLQEM 127 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~~~---~~~nvva~~~~~-~-~~~ill~~H~DvVp~~~~ 127 (450)
+++++++++|++|||+|+ +|.++++|++++|+++|++++... +++|+++++++. + +|+|+|+|||||||+++
T Consensus 10 ~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~- 88 (198)
T 1q7l_A 10 HPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFK- 88 (198)
T ss_dssp CHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCG-
T ss_pred HHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCc-
Confidence 568999999999999998 688999999999999999987642 567999999654 3 48999999999999865
Q ss_pred CCC---ccccC--CCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-C-ccchHHHHHccccc--c
Q 013076 128 VEW---EYKSK--IPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-G-GGGAHKVLEAGVLE--K 195 (450)
Q Consensus 128 ~~w---~~~~~--~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g-~~Ga~~l~~~~~~~--~ 195 (450)
..| ||... .||++||||+ |++++++|.|+++|++.+.+++++|.|+|+++|| | ..|++++++++.+. +
T Consensus 89 ~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~ 168 (198)
T 1q7l_A 89 EHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALR 168 (198)
T ss_dssp GGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGGTSTTTHHHHTTSHHHHTTC
T ss_pred ccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccccCccccHHHHHHhHHhccCC
Confidence 357 45533 5899999996 8999999999999999887889999999999999 5 48999998865422 3
Q ss_pred cceEEEeccCCCCCCceEEeecCcccccceEEEE
Q 013076 196 VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEA 229 (450)
Q Consensus 196 ~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i 229 (450)
+|+++ +....+|++...+. .++||..|++|
T Consensus 169 ~~~~i--d~g~~ept~~~~v~--~~~kG~~~~~v 198 (198)
T 1q7l_A 169 AGFAL--DEGIANPTDAFTVF--YSERSPWWVRV 198 (198)
T ss_dssp EEEEE--ECCCCCSSSSEEEE--ECCSSCGGGCC
T ss_pred cCEEE--ecCccCCCCCceEE--EEccEEEEEEC
Confidence 45555 22335666633222 34678877653
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.94 E-value=2.2e-26 Score=224.30 Aligned_cols=248 Identities=14% Similarity=0.102 Sum_probs=165.3
Q ss_pred HHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC-CCceEEEEeeccCCCCc-------------
Q 013076 60 IRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG-EPPFVALRADMDSLPLQ------------- 125 (450)
Q Consensus 60 ~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~-~~~~ill~~H~DvVp~~------------- 125 (450)
+|++|++|||+|++|.++++||+++|+++|++++.+. ..|+++.+++. ++|+|+|.||||+||.-
T Consensus 3 ~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d~-~gnlia~~~g~~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~ 81 (340)
T 2fvg_A 3 YLKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYTDV-LGNLIALKRGRDSSKKLLVSAHMDEVGFVVSKIEKDGKVSFL 81 (340)
T ss_dssp CHHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEECT-TSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTSCEEEE
T ss_pred HHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEeC-CCcEEEEecCCCCCceEEEEeccCcCcEEEEEECCCCEEEEE
Confidence 5889999999999999999999999999999988653 56999998654 34899999999999820
Q ss_pred CcCCCcc---cc------------------------------------------------CC-C-------------Cce
Q 013076 126 EMVEWEY---KS------------------------------------------------KI-P-------------GKM 140 (450)
Q Consensus 126 ~~~~w~~---~~------------------------------------------------~~-~-------------g~l 140 (450)
...+|.. .. +. + |++
T Consensus 82 ~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i 161 (340)
T 2fvg_A 82 PVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRA 161 (340)
T ss_dssp EESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEE
T ss_pred eeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEE
Confidence 0124532 11 11 4 899
Q ss_pred ecccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEeccCCCCCCceEEeec
Q 013076 141 HACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRP 217 (450)
Q Consensus 141 ~GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~ 217 (450)
|||.. |++++++|.|++.++ +++++|.|+|+++|| |+.|++++.+. ..+|+++..++ +..
T Consensus 162 ~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~---~~~~~~i~~d~-----~~~----- 224 (340)
T 2fvg_A 162 VGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQ---LKPTCAIVVET-----TTA----- 224 (340)
T ss_dssp EESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHH---HCCSEEEEEEE-----EEE-----
T ss_pred eeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhc---cCCCEEEEEec-----ccC-----
Confidence 99943 899999999998876 477999999999999 78899988763 24566665421 100
Q ss_pred CcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEE
Q 013076 218 GPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGT 297 (450)
Q Consensus 218 g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~id 297 (450)
+ ++.|+++|++.|+.|.|++..+ . + .+.
T Consensus 225 -----~------~~~G~~~h~~~~~~G~g~~i~~---------~-----~-------------~~~-------------- 252 (340)
T 2fvg_A 225 -----G------DNPELEERKWATHLGDGPAITF---------Y-----H-------------RGY-------------- 252 (340)
T ss_dssp -----C------SCSTTCCSSSSCCTTSCCEECS---------C-----C-------------SSS--------------
T ss_pred -----C------CCCCCccccCCcccCCCcEEEE---------e-----C-------------CCC--------------
Confidence 1 4578889988999888854100 0 0 000
Q ss_pred EecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccch
Q 013076 298 FRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSED 377 (450)
Q Consensus 298 iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD 377 (450)
..++.+.+.+++++++. |.+... ....+++||
T Consensus 253 ----------------------------------------------~~~~~l~~~l~~~a~~~-gi~~~~-~~~~~ggtD 284 (340)
T 2fvg_A 253 ----------------------------------------------VIPKEIFQTIVDTAKNN-DIPFQM-KRRTAGGTD 284 (340)
T ss_dssp ----------------------------------------------CCCHHHHHHHHHHHHHT-TCCCEE-CCCC-----
T ss_pred ----------------------------------------------CCCHHHHHHHHHHHHHc-CCCeEE-EecCCCCcc
Confidence 00122344444444443 444321 124678999
Q ss_pred HHHHhh--h-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 378 FSFYQE--V-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 378 ~~~~~~--~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
++.|.. . +|++.++.|. ..+|+++|+++++++..++++|..++.++++
T Consensus 285 a~~~~~~~~GiP~v~~g~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 285 AGRYARTAYGVPAGVISTPA--------RYIHSPNSIIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp --------CCSCEEEEEEEE--------EESSTTCEEEEHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHhhCCCCcEEEecccc--------cccCChhhcccHHHHHHHHHHHHHHHHhccc
Confidence 999885 3 9988766553 2399999999999999999999999998875
No 32
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.92 E-value=1e-23 Score=207.96 Aligned_cols=256 Identities=14% Similarity=0.122 Sum_probs=181.9
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC-CCceEEEEeeccCCCC---------
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG-EPPFVALRADMDSLPL--------- 124 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~-~~~~ill~~H~DvVp~--------- 124 (450)
++++++|++|++|||+|++|.++++||+++|+++|++++.+ ...|++|.+++. .+|+|+|.|||||||.
T Consensus 7 ~~~~~~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~~vll~aH~D~v~~~v~~i~~~G 85 (373)
T 1vhe_A 7 DETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTD-RLGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKG 85 (373)
T ss_dssp CHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEEC-TTCCEEEEEESSTTSCEEEEEEECCCCEEEEEEECTTS
T ss_pred HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEc-CCCcEEEEecCCCCCceEEEEecCCcCCEEEEEECCCC
Confidence 46899999999999999999999999999999999998765 467999988654 4589999999999982
Q ss_pred -------cC---------------cC-------CCc--c--cc----------------------------C--------
Q 013076 125 -------QE---------------MV-------EWE--Y--KS----------------------------K-------- 135 (450)
Q Consensus 125 -------~~---------------~~-------~w~--~--~~----------------------------~-------- 135 (450)
|. .+ .|. + +. .
T Consensus 86 ~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~ 165 (373)
T 1vhe_A 86 FIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVP 165 (373)
T ss_dssp CEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEE
T ss_pred eEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEE
Confidence 10 00 021 1 00 0
Q ss_pred --------CCCceecccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEecc
Q 013076 136 --------IPGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHV 204 (450)
Q Consensus 136 --------~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~ 204 (450)
++|++|||+. |++++++|.|++.|++.+ ++++|.|+|+++|| |+.|++.+... ..+|++++.++
T Consensus 166 ~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~G~~G~~~~~~~---~~~d~~i~~d~ 240 (373)
T 1vhe_A 166 HFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNIVYGVGTVQEEVGLRGAKTAAHT---IQPDIAFGVDV 240 (373)
T ss_dssp CCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSEEEEEEESCCTTTSHHHHHHHHH---HCCSEEEEEEE
T ss_pred ccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCceEEEEEECCcccChhhHHHHhcc---cCCCEEEEEec
Confidence 1689999976 899999999999998764 67999999999999 77899888542 24577766432
Q ss_pred CCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCC
Q 013076 205 DPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGA 284 (450)
Q Consensus 205 ~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~ 284 (450)
.. .+. .+|. .|+.+. ..++. |
T Consensus 241 ~~---~~~--------~~g~---------------~~~~~~---------------------~~lg~----------G-- 261 (373)
T 1vhe_A 241 GI---AGD--------TPGI---------------SEKEAQ---------------------SKMGK----------G-- 261 (373)
T ss_dssp EE---CCC--------STTC---------------CTTTCC---------------------CCTTS----------C--
T ss_pred cc---cCC--------CCCC---------------cccccc---------------------cccCC----------C--
Confidence 11 000 0111 111110 00000 1
Q ss_pred CCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCc
Q 013076 285 FNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQ 364 (450)
Q Consensus 285 ~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~ 364 (450)
| .+.+. .. ....++++++.+++++++. |.+
T Consensus 262 ----~-------------------------------------~i~~~-----~~---~~~~~~~l~~~l~~~a~~~-gi~ 291 (373)
T 1vhe_A 262 ----P-------------------------------------QIIVY-----DA---SMVSHKGLRDAVVATAEEA-GIP 291 (373)
T ss_dssp ----C-------------------------------------EEEEE-----ET---TEECCHHHHHHHHHHHHHH-TCC
T ss_pred ----c-------------------------------------eEEEe-----CC---CCCCCHHHHHHHHHHHHHc-CCC
Confidence 0 01111 11 2345788999999999887 876
Q ss_pred cccccCCCcccchHHHH--hhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhh
Q 013076 365 KVKVMAPVMGSEDFSFY--QEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLE 434 (450)
Q Consensus 365 ~~~~~~~~~g~tD~~~~--~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 434 (450)
+.. ....+|+||+++| ... +|++.++.|. ..+|+++|+++++++..+++++..++.++++.
T Consensus 292 ~~~-~~~~~ggtDa~~~~~~~~GiPtv~lg~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~~ 355 (373)
T 1vhe_A 292 YQF-DAIAGGGTDSGAIHLTANGVPALSITIAT--------RYIHTHAAMLHRDDYENAVKLITEVIKKLDRK 355 (373)
T ss_dssp CEE-EEETTCCCTHHHHTTSTTCCCEEEEEEEE--------BSTTSSCEEEEHHHHHHHHHHHHHHHHHCCHH
T ss_pred eEE-ecCCCCCccHHHHHHhCCCCcEEEEcccc--------ccCCChhheecHHHHHHHHHHHHHHHHHhcHH
Confidence 532 1346789999999 444 9998866552 34899999999999999999999999988653
No 33
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.91 E-value=4.7e-24 Score=207.28 Aligned_cols=239 Identities=21% Similarity=0.214 Sum_probs=175.2
Q ss_pred HHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCCC-------------
Q 013076 57 MIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLP------------- 123 (450)
Q Consensus 57 ~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp------------- 123 (450)
+++++++|++|||+|++|.++++||+++|+++|+ ++. +..+|++|.++++ +|+|+|.||||||+
T Consensus 4 ~~~~l~~l~~~~s~sg~e~~~~~~l~~~l~~~g~-~~~-d~~gnlia~~~~~-~~~i~l~aH~D~v~~~v~~i~~~G~l~ 80 (332)
T 2wyr_A 4 MIEKLKKFTQIPGISGYEERIREEIIREIKDFAD-YKV-DAIGNLIVELGEG-EERILFMAHMDEIGLLITGITDEGKLR 80 (332)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHHTTTCC-CEE-CTTCCEEEEEESS-SEEEEEEEECCBCEEEEEEECTTSCEE
T ss_pred HHHHHHHHHcCCCCCCcHHHHHHHHHHHHhhcCc-EEE-cCCCeEEEEecCC-CceEEEEeccCcccEEEEEECCCCeEE
Confidence 6789999999999999999999999999999999 765 4578999998764 48999999999994
Q ss_pred ---CcCcCCCc---------------------------------------------------------------------
Q 013076 124 ---LQEMVEWE--------------------------------------------------------------------- 131 (450)
Q Consensus 124 ---~~~~~~w~--------------------------------------------------------------------- 131 (450)
.|. |.
T Consensus 81 ~~~~Gg---~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~ 157 (332)
T 2wyr_A 81 FRKVGG---IDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKK 157 (332)
T ss_dssp EEEESC---CCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECC
T ss_pred EEecCC---cChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEcc
Confidence 442 21
Q ss_pred -cccCCCCceecccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEeccCCC
Q 013076 132 -YKSKIPGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPN 207 (450)
Q Consensus 132 -~~~~~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~ 207 (450)
|....+|++|||.. |++++++|.|++.|++.+ ++++|.|+|+++|| |+.|++++.+. ..+|+++..+ +.
T Consensus 158 ~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~---~~~~~~i~~d--~~ 230 (332)
T 2wyr_A 158 HFSVLNGKYVSTRGLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH---YYPQYAFAID--SF 230 (332)
T ss_dssp CCEEETTTEEECTTHHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT---CCCSEEEEEC--CE
T ss_pred ccEEecCCeEEcccCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc---cCCCEEEEEe--cc
Confidence 11125789999943 899999999999998764 67999999999999 77899988642 2467777643 21
Q ss_pred CCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCC
Q 013076 208 LPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNV 287 (450)
Q Consensus 208 ~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nv 287 (450)
.... ++| | .+.. +. |..
T Consensus 231 ~~~~---------~p~---------~------~~~l--------------------------g~----------G~~--- 247 (332)
T 2wyr_A 231 ACCS---------PLT---------G------DVKL--------------------------GK----------GPV--- 247 (332)
T ss_dssp ECCS---------GGG---------T------TCCT--------------------------TS----------CCE---
T ss_pred cccC---------CCC---------C------ceee--------------------------CC----------CCE---
Confidence 0000 011 0 0000 00 100
Q ss_pred CCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCcccc
Q 013076 288 IPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVK 367 (450)
Q Consensus 288 iP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~ 367 (450)
+... .. ....++++++.+++++++. |.++.
T Consensus 248 ------------------------------------------i~~~---d~---~~~~~~~l~~~l~~~~~~~-gi~~~- 277 (332)
T 2wyr_A 248 ------------------------------------------IRAV---DN---SAIYSRDLARKVWSIAEKN-GIEIQ- 277 (332)
T ss_dssp ------------------------------------------EEEE---CS---SCBCCHHHHHHHHHHHHHT-TCCCE-
T ss_pred ------------------------------------------EEEc---CC---CCCCCHHHHHHHHHHHHHc-CCCeE-
Confidence 0100 01 2345788999999999987 87653
Q ss_pred ccCCCcccchHHHHhhhcCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHH
Q 013076 368 VMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALR 430 (450)
Q Consensus 368 ~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~ 430 (450)
....+|+||+++|...+|++.++.|. ..+|+++|+++++++.++++++..++.+
T Consensus 278 -~~~~~ggtDa~~~~~GiPtv~lg~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~~~~ 331 (332)
T 2wyr_A 278 -IGVTGGGTDASAFQDRSKTLALSVPI--------KYLHSEVETLHLNDLEKLVKLIEALAFE 331 (332)
T ss_dssp -EEECSSCCGGGGGTTTSEEEEEECEE--------BSCSSTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred -EecCCCCchHHHHHcCCCEEEEcCCc--------CCCCChhhcccHHHHHHHHHHHHHHHHh
Confidence 34566899999987778987755442 3499999999999999999999998865
No 34
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.91 E-value=7.2e-28 Score=234.08 Aligned_cols=323 Identities=13% Similarity=0.006 Sum_probs=180.5
Q ss_pred HHHHHHhHcCCCCCcchH-HHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCCCCcCcCCCccccCC
Q 013076 58 IGIRRKIHQNPELGYQEF-ETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKI 136 (450)
Q Consensus 58 ~~~l~~l~~ips~s~~e~-~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~~~~~~w~~~~~~ 136 (450)
+++|++|++|||+|++|. ++++||+++|+++|++++++ ..+||+|+++++ +|+|+|.|||||||...... ..
T Consensus 12 ~elL~~Lv~ipS~sg~E~~~v~~~l~~~l~~~G~~v~~D-~~GNlia~~~g~-~p~lll~~H~Dtvp~~v~~~-----~~ 84 (354)
T 2wzn_A 12 WKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVD-KLGNVIAHFKGS-SPRIMVAAHMDKIGVMVNHI-----DK 84 (354)
T ss_dssp HHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTSSEEEEC-TTCCEEEEECCS-SSEEEEEEECCBCEEEEEEE-----CT
T ss_pred HHHHHHHhcCCCCCcchHHHHHHHHHHHHHHcCCEEEEe-CCCeEEEEECCC-CceEEEEeccccCCCcCCee-----ec
Confidence 479999999999999885 68999999999999999865 467999999875 48999999999998653221 24
Q ss_pred CCceecccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEeccCCCCCCceE
Q 013076 137 PGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEV 213 (450)
Q Consensus 137 ~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~ 213 (450)
+|.+++++. +.+.++...++..+.+.+ .+...+.++++.+|| +..+.+.+..+.......+..... ....+.
T Consensus 85 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~- 159 (354)
T 2wzn_A 85 DGYLHIVPIGGVLPETLVAQRIRFFTEKG-ERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSKEE---AEEMGF- 159 (354)
T ss_dssp TSCEEEEEESSCCGGGGTTCEEEEEETTE-EEEEEECCCCGGGC---------CCGGGCCEECSCSSHHH---HHHTTC-
T ss_pred CCceeeccCCCccHHHHHHHHHHHhhccC-CccceEEEeeeeeEecccccccchhhhhhhhhhcccchhh---hhcccc-
Confidence 577776654 222222222332333333 455678888899999 556666554332211111111000 000010
Q ss_pred EeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEE-EEec-----CCCCCC
Q 013076 214 ASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVA-KFQG-----GGAFNV 287 (450)
Q Consensus 214 ~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~-~i~g-----G~~~nv 287 (450)
. ....+.....+++.+...|++.+..+.+++..+..++.+|..... ......+ .... +...|.
T Consensus 160 --~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~ 228 (354)
T 2wzn_A 160 --R--VGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLGDHEA-------DIYIVGSVQEEVGLRGARVASYA 228 (354)
T ss_dssp --C--TTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCCCSS-------EEEEEEESCGGGTSHHHHHHHHH
T ss_pred --c--cceeeeeeeeeEeecccccccccccccchhhhHHHHHHHHHhccc-------cccccccceeeeeeecccccccc
Confidence 0 112244555667778888887766555555555555554433210 0111111 1111 234566
Q ss_pred CCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHH-HHhhcCCccc
Q 013076 288 IPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTV-AGDMLDTQKV 366 (450)
Q Consensus 288 iP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~g~~~~ 366 (450)
++..+....+.+......... ......+....... . ...++......... .....+..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~~~- 288 (354)
T 2wzn_A 229 INPEVGIAMDVTFAKQPHDKG----------KIVPELGKGPVMDV------G---PNINPKLRAFADEVAKKYEIPLQV- 288 (354)
T ss_dssp HCCSEEEEEEEEECCCTTSTT----------CCCCCTTSCCEEEE------S---TTSCHHHHHHHHHHHHHTTCCCEE-
T ss_pred cccccceeeeeeeccccchhh----------hhheeecccccccc------c---cccCcchhhhhHHHHHHhcCCCce-
Confidence 667777777766554322110 00000011111111 1 11122222222222 222223333
Q ss_pred cccCCCcccchHHHHhh--h-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 367 KVMAPVMGSEDFSFYQE--V-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 367 ~~~~~~~g~tD~~~~~~--~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
.....+|+||++++.. . +|++.+|+|. ..+|+++|+++++++.+++++|.+++.+|-
T Consensus 289 -~~~~~~ggTDa~~~~~~~~Giptv~~G~g~--------~~~Ht~~E~v~i~dl~~~~~ll~~~i~~L~ 348 (354)
T 2wzn_A 289 -EPSPRPTGTDANVMQINKEGVATAVLSIPI--------RYMHSQVELADARDVDNTIKLAKALLEELK 348 (354)
T ss_dssp -EECCSCCSSHHHHHHTSTTCCEEEEEEEEE--------BSTTSTTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred -EEEecccccHHHHHHHhcCCCCEEEECccc--------CCCCcccEEEEHHHHHHHHHHHHHHHHhCc
Confidence 3466789999998753 3 8988866653 238999999999999999999999998873
No 35
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.90 E-value=1.7e-22 Score=197.53 Aligned_cols=239 Identities=15% Similarity=0.132 Sum_probs=163.3
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC-CCceEEEEeeccCC-----------
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG-EPPFVALRADMDSL----------- 122 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~-~~~~ill~~H~DvV----------- 122 (450)
+++++++++|++|||+|++|.++++|++++|+++|++++++ ..+|++|++++. .+|+|+|.||||||
T Consensus 6 ~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~d-~~gnl~a~~~g~~~~~~ill~~H~Dtv~~~v~~i~~~G 84 (349)
T 2gre_A 6 KETMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRN-NKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEIKPDG 84 (349)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEEC-SSSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTS
T ss_pred HHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhCCEEEEe-cCCcEEEEecCCCCCceEEEEecccccceeEEEECCCC
Confidence 67899999999999999999999999999999999998765 467999999654 34899999999999
Q ss_pred -----CCcCcCCCccc----------------------------------------------------------------
Q 013076 123 -----PLQEMVEWEYK---------------------------------------------------------------- 133 (450)
Q Consensus 123 -----p~~~~~~w~~~---------------------------------------------------------------- 133 (450)
|.| +|...
T Consensus 85 ~l~~~~~G---g~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~ 161 (349)
T 2gre_A 85 RLSLSMIG---GFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIE 161 (349)
T ss_dssp CEEEEEES---SCCGGGTTTCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTCC
T ss_pred eEEEEecC---CCccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCC
Confidence 443 23210
Q ss_pred ------------cCCCCceecccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccce
Q 013076 134 ------------SKIPGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNA 198 (450)
Q Consensus 134 ------------~~~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~ 198 (450)
...+|++|||+. |++++++|.|++.+++.+.+++++|.|+|+++|| |+.|++.+ ..++|+
T Consensus 162 ~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~G~~g~~~~-----~~~~~~ 236 (349)
T 2gre_A 162 VGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNI-----PEETVE 236 (349)
T ss_dssp TTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCC-----CTTEEE
T ss_pred CCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccCCCCceEEEEEECcccCCchhhccc-----ccCCCE
Confidence 013578999966 8999999999999998877788999999999999 77888765 124566
Q ss_pred EEEeccCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEE
Q 013076 199 IFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAK 278 (450)
Q Consensus 199 ~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~ 278 (450)
++.++. ... +. |-..++.| ++
T Consensus 237 ~i~~D~--~~~-------------~~------------~p~~~~~g-----------------------------~~--- 257 (349)
T 2gre_A 237 YLAVDM--GAL-------------GD------------GQASDEYT-----------------------------VS--- 257 (349)
T ss_dssp EEEECC--CCC-------------SC------------C--CCTTS-----------------------------EE---
T ss_pred EEEEec--ccc-------------cC------------CCCCCCCc-----------------------------eE---
Confidence 665432 110 00 00000000 00
Q ss_pred EecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHH
Q 013076 279 FQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAG 358 (450)
Q Consensus 279 i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 358 (450)
+.+.. . . ...++.+.+.++++++
T Consensus 258 -------------------------------------------------i~~~~----~-~---~~~~~~l~~~l~~~a~ 280 (349)
T 2gre_A 258 -------------------------------------------------ICAKD----S-S---GPYHYALRKHLVELAK 280 (349)
T ss_dssp -------------------------------------------------EEEEE----T-T---EECCHHHHHHHHHHHH
T ss_pred -------------------------------------------------EEEcc----C-C---CCCCHHHHHHHHHHHH
Confidence 00000 0 0 0246778888888888
Q ss_pred hhcCCccccccCCCcccchHHHHhh--h-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHH
Q 013076 359 DMLDTQKVKVMAPVMGSEDFSFYQE--V-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLAL 429 (450)
Q Consensus 359 ~~~g~~~~~~~~~~~g~tD~~~~~~--~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~ 429 (450)
+. |.+... ....+|++|+..+.. . +|++.++.+. ..+|+ .|+++++++..+++++..++.
T Consensus 281 ~~-gi~~q~-~~~~ggGsDa~~~~~~~~GiPt~~lg~~~--------~~~Hs-~E~~~~~dl~~~~~ll~~~l~ 343 (349)
T 2gre_A 281 TN-HIEYKV-DIYPYYGSDASAAIRAGFDVKHALIGAGI--------DSSHA-FERTHESSIAHTEALVYAYVM 343 (349)
T ss_dssp HH-TCCEEE-EECSCC--------CCSSSCEEEEEEECC--------BSTTS-SEEEEHHHHHHHHHHHHHHHH
T ss_pred Hc-CCCcEE-eccCCCCccHHHHHHhCCCCcEEEeccCc--------ccccc-ceeccHHHHHHHHHHHHHHHh
Confidence 87 776532 134678999998853 3 8988766543 34999 999999999999999988865
No 36
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.89 E-value=3.9e-22 Score=195.27 Aligned_cols=247 Identities=17% Similarity=0.141 Sum_probs=174.8
Q ss_pred HHHHHHHhHcCCCCCcch-HHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCCC------------
Q 013076 57 MIGIRRKIHQNPELGYQE-FETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLP------------ 123 (450)
Q Consensus 57 ~~~~l~~l~~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp------------ 123 (450)
++++|++|+++||+|++| .++++||+++|+++|++++.+ ...|++|.++++ +|+|+|.||+|+|+
T Consensus 8 ~~~~l~~L~~~~s~sg~e~~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~-~~~i~l~aH~D~v~~~v~~i~~~G~l 85 (353)
T 1y0y_A 8 DYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVD-KLGNVIAHKKGE-GPKVMIAAHMDQIGLMVTHIEKNGFL 85 (353)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHGGGSSEEEEC-TTCCEEEEECCS-SCEEEEEEECCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhCCeEEEc-CCCCEEEEecCC-CccEEEEeccCcccEEEEEECCCceE
Confidence 578999999999999999 999999999999999998764 467999998655 58999999999995
Q ss_pred ----CcCcCCCccc------------------------------------------------------------------
Q 013076 124 ----LQEMVEWEYK------------------------------------------------------------------ 133 (450)
Q Consensus 124 ----~~~~~~w~~~------------------------------------------------------------------ 133 (450)
.|. |...
T Consensus 86 ~~~~~Gg---~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v 162 (353)
T 1y0y_A 86 RVAPIGG---VDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVI 162 (353)
T ss_dssp EEEEESS---CCGGGTTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTCCTTCEE
T ss_pred EEEEeCC---cchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEE
Confidence 332 2100
Q ss_pred -------cCCCCceecccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEec
Q 013076 134 -------SKIPGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLH 203 (450)
Q Consensus 134 -------~~~~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~ 203 (450)
...++++|||.. |++++++|.+++.|++ ++++|.|+|+++|| |+.|++.+... ..+|+++..+
T Consensus 163 ~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~g~~G~~~~~~~---~~~~~~i~~d 235 (353)
T 1y0y_A 163 TWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGLRGARTSAFG---IEPDYGFAID 235 (353)
T ss_dssp EECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTSHHHHHHHHH---HCCSEEEEEE
T ss_pred EeccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccchhHHHHHhhc---cCCCEEEEEe
Confidence 001467888844 8999999999998865 67899999999999 77899988642 2456666543
Q ss_pred cCCCCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCC
Q 013076 204 VDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGG 283 (450)
Q Consensus 204 ~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~ 283 (450)
+... .. .+ +. . .+.| . ..++ +|
T Consensus 236 ~~~~--~~----~p-----~~-------------~--~~~g---------------~------~~lg----------~G- 257 (353)
T 1y0y_A 236 VTIA--AD----IP-----GT-------------P--EHKQ---------------V------THLG----------KG- 257 (353)
T ss_dssp EEEC--CC----ST-----TC-------------C--GGGC---------------C------CCTT----------SC-
T ss_pred cccc--cC----CC-----CC-------------c--cccC---------------c------cccC----------CC-
Confidence 2110 00 00 00 0 0000 0 0000 11
Q ss_pred CCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCC
Q 013076 284 AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDT 363 (450)
Q Consensus 284 ~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~ 363 (450)
| . +.+.. . ....++++++.+++++++. |.
T Consensus 258 -----~---~----------------------------------i~~~d----~----~~~~~~~l~~~l~~~a~~~-gi 286 (353)
T 1y0y_A 258 -----T---A----------------------------------IKIMD----R----SVICHPTIVRWLEELAKKH-EI 286 (353)
T ss_dssp -----E---E----------------------------------EEEEE----T----TEECCHHHHHHHHHHHHHT-TC
T ss_pred -----c---E----------------------------------EEEeC----C----CCCCCHHHHHHHHHHHHHc-CC
Confidence 0 0 01100 1 2345788999999999987 87
Q ss_pred ccccccCCCcccchHHHH--hhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 364 QKVKVMAPVMGSEDFSFY--QEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 364 ~~~~~~~~~~g~tD~~~~--~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
+... ....+|+||++.| ... +|++.+++|. ..+|+++|+++++++..+++++..++.++.+
T Consensus 287 ~~~~-~~~~~ggsDa~~~~~~~~GiPtv~lg~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 287 PYQL-EILLGGGTDAGAIHLTKAGVPTGALSVPA--------RYIHSNTEVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp CEEE-EECSSCCCTHHHHTTSTTCCCEEEEEEEE--------BSCSSSCEEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred CEEE-eecCCCCchHHHHHHhCCCCcEEEEcccc--------cccCCHHHhcCHHHHHHHHHHHHHHHHhhhh
Confidence 6532 1346789999999 454 9998866542 3499999999999999999999999988753
No 37
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.88 E-value=1.1e-21 Score=191.75 Aligned_cols=246 Identities=15% Similarity=0.106 Sum_probs=166.8
Q ss_pred HHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCCCCc----------
Q 013076 56 WMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQ---------- 125 (450)
Q Consensus 56 ~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~~---------- 125 (450)
++++++++|+++||+|++|.++++||+++|+++|++++++ ...|+++.+++.+.|.|+|.||+|||+.-
T Consensus 6 ~~~~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~i~l~aH~DtV~~~v~~i~~G~l~ 84 (346)
T 1vho_A 6 ETGKLLMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKTT-RHGSLIGYKKGKGIGKLAFFAHVDEIGFVVSKVEGQFAR 84 (346)
T ss_dssp CHHHHHHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEEC-TTSCEEEEECCSSSCEEEEEEECCBCCEEEEEEETTEEE
T ss_pred HHHHHHHHHHcCCCCCcchHHHHHHHHHHHHhhCCEEEEe-cCCcEEEEEcCCCCceEEEEecCcccceEeEEecCCeEE
Confidence 4688999999999999999999999999999999998764 46799999865434899999999999520
Q ss_pred --CcCCCcccc-----------------------------------------------------------------CCCC
Q 013076 126 --EMVEWEYKS-----------------------------------------------------------------KIPG 138 (450)
Q Consensus 126 --~~~~w~~~~-----------------------------------------------------------------~~~g 138 (450)
....|.+.. ..+|
T Consensus 85 ~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~ 164 (346)
T 1vho_A 85 LEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNG 164 (346)
T ss_dssp EEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETT
T ss_pred EEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhhhcC
Confidence 001232110 0025
Q ss_pred ceecccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEeccCCCCCCceEEe
Q 013076 139 KMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVAS 215 (450)
Q Consensus 139 ~l~GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~ 215 (450)
+++||+. |.++++++.+++.+++.+ +++++.++|+.+|| |..|++.... . -.+|+++..+.
T Consensus 165 ~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~--~-i~~~~~i~~D~----------- 228 (346)
T 1vho_A 165 KVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETGCLGALTGAY--E-INPDAAIVMDV----------- 228 (346)
T ss_dssp EEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSSHHHHHHTTC--C-CCCSEEEEEEE-----------
T ss_pred eEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccchhhHHHHhc--c-cCCCEEEEeec-----------
Confidence 6888876 799999999999987653 66899999999999 6677765321 1 12344443211
Q ss_pred ecCcccccceEEEEEEEecCCCCC-CCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEE
Q 013076 216 RPGPLLAGSGFFEAVIGGKGGHAA-IPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLI 294 (450)
Q Consensus 216 ~~g~~~~G~~~~~i~v~G~~~Hss-~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~ 294 (450)
+ |++ .|. .+ . .. .+
T Consensus 229 --------------~------~~~~~~~--~~--~---------~~--------~~------------------------ 243 (346)
T 1vho_A 229 --------------T------FASEPPF--SD--H---------IE--------LG------------------------ 243 (346)
T ss_dssp --------------E------CCCCTTS--CC--C---------CC--------TT------------------------
T ss_pred --------------c------cccCCCC--Cc--c---------cc--------cC------------------------
Confidence 0 111 110 00 0 00 00
Q ss_pred EEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCC-c
Q 013076 295 GGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPV-M 373 (450)
Q Consensus 295 ~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~-~ 373 (450)
.+. .+++ ....|+++++.+++++++. |.+.. .... +
T Consensus 244 -----------------------------~g~--~i~~---------~~~~~~~l~~~~~~~a~~~-gi~~~--~~~~~g 280 (346)
T 1vho_A 244 -----------------------------KGP--VIGL---------GPVVDRNLVQKIIEIAKKH-NVSLQ--EEAVGG 280 (346)
T ss_dssp -----------------------------SCC--EEEC---------STTSCHHHHHHHHHHHHHT-TCCCE--EESSCC
T ss_pred -----------------------------CCc--eEEe---------CCcCCHHHHHHHHHHHHHC-CCCEE--EEeCCC
Confidence 011 1211 1245788999999999987 88764 2334 4
Q ss_pred -ccchHHHHhh--h-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHhh
Q 013076 374 -GSEDFSFYQE--V-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLLE 434 (450)
Q Consensus 374 -g~tD~~~~~~--~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 434 (450)
|+||++.+.. . +|++++++|. ..+|+++|+++++++..+++++..++.+++..
T Consensus 281 ~ggsDa~~~~~~~~gipt~~lg~~~--------~~~Hs~~E~~~~~dl~~~~~ll~~~~~~~~~~ 337 (346)
T 1vho_A 281 RSGTETDFVQLVRNGVRTSLISIPL--------KYMHTPVEMVDPRDVEELARLLSLVAVELEVE 337 (346)
T ss_dssp C----CTTHHHHHTTCEEEEEEEEC--------BSTTSTTEEECHHHHHHHHHHHHHHHHHCC--
T ss_pred CCCchHHHHHHhCCCCcEEEEehhh--------cccccHHHhcCHHHHHHHHHHHHHHHHHhhhh
Confidence 8999999964 3 9998866653 24999999999999999999999999988764
No 38
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.86 E-value=9.7e-22 Score=189.61 Aligned_cols=237 Identities=14% Similarity=0.018 Sum_probs=165.7
Q ss_pred HHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceeccc------CCceEEEEEcCCCCceEEEEeeccCCC----
Q 013076 54 VGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV------AVTGVVGFIGTGEPPFVALRADMDSLP---- 123 (450)
Q Consensus 54 ~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~nvva~~~~~~~~~ill~~H~DvVp---- 123 (450)
++++++++++|++|||+|++|.++++||+++|+++|++++++. +.+|+++.+++ . |+|+|.||||||+
T Consensus 16 ~~~~~~~l~~Lv~i~s~sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g-~-~~ill~aH~DtV~~~v~ 93 (321)
T 3cpx_A 16 YFQGMQLLKELCSIHAPSGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG-N-PRTAVFAHMDSIGFTVS 93 (321)
T ss_dssp GCCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES-S-CSEEEEEECCBCEEEEC
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC-C-ceEEEEecCCcCCeEec
Confidence 4678999999999999999999999999999999999876543 15789999866 4 8899999999993
Q ss_pred -------CcCcCCCc-----cccC-------------------------------------CCCceecccc--hHHHHHH
Q 013076 124 -------LQEMVEWE-----YKSK-------------------------------------IPGKMHACGH--DGHVTML 152 (450)
Q Consensus 124 -------~~~~~~w~-----~~~~-------------------------------------~~g~l~GrG~--kg~~a~~ 152 (450)
.|....|. .... .+|+++||+. |++++++
T Consensus 94 ~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~~g~i~~~~~D~k~G~aa~ 173 (321)
T 3cpx_A 94 YNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREEGDFILTPYLDDRLGVWTA 173 (321)
T ss_dssp STTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEETTEEECTTHHHHHHHHHH
T ss_pred ccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEEcCEEEEcCCcCHHHHHHH
Confidence 33211221 0000 0267888876 7999999
Q ss_pred HHHHHHHHhccccCCceEEEEEecCCC-CccchHHHH---HcccccccceEEEeccCCCCCCceEEeecCcccccceEEE
Q 013076 153 LGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVL---EAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFE 228 (450)
Q Consensus 153 l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~---~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~ 228 (450)
+.+++.++ . +.++|+++|| |+.|++... .+. -++|+++..+ +. . .+.
T Consensus 174 l~al~~l~------~--i~~~~t~~EEvG~~Ga~~a~~~~~~~--~~~~~~i~~D--~~---~----------~~~---- 224 (321)
T 3cpx_A 174 LELAKTLE------H--GIIAFTCWEEHGGGSVAYLARWIYET--FHVKQSLICD--IT---W----------VTE---- 224 (321)
T ss_dssp HHHTTTCC------S--EEEEEESSTTTTCCSHHHHHHHHHHH--HCCCEEEECC--CE---E----------CCS----
T ss_pred HHHHHHhc------C--cEEEEECCccCchhcchhhhhccccc--cCCCEEEEEe--Cc---c----------ccC----
Confidence 98887653 1 9999999999 778887532 111 1356666532 21 0 011
Q ss_pred EEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHH
Q 013076 229 AVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQ 308 (450)
Q Consensus 229 i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~ 308 (450)
.. .++
T Consensus 225 -------------------------------~~------~~~-------------------------------------- 229 (321)
T 3cpx_A 225 -------------------------------GV------EAG-------------------------------------- 229 (321)
T ss_dssp -------------------------------SS------CTT--------------------------------------
T ss_pred -------------------------------Cc------ccC--------------------------------------
Confidence 00 000
Q ss_pred HHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHHHHh--hh-c
Q 013076 309 LKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQ--EV-M 385 (450)
Q Consensus 309 ~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~--~~-~ 385 (450)
.| ..+... . . ...+.++++.+++++++. |.+.... ...+|+||++.+. .. +
T Consensus 230 ---------------~G--~~i~~~---~--~--~~~~~~l~~~~~~~a~~~-gi~~q~~-~~~~GGsD~~~~~~s~~Gi 283 (321)
T 3cpx_A 230 ---------------KG--VAISMR---D--R--MIPRKKYVNRIIELARQT-DIPFQLE-VEGAGASDGRELQLSPYPW 283 (321)
T ss_dssp ---------------SC--EEEEEE---S--S--SCCCHHHHHHHHHHHTTS-SCCEEEE-ECSSCCCHHHHHHHSSSCC
T ss_pred ---------------CC--cEEEEC---C--C--CCCCHHHHHHHHHHHHHc-CCCEEEE-eCCCCCccHHHHHHhCCCC
Confidence 01 112221 1 1 235788999999999987 8876421 2378999999994 34 8
Q ss_pred CeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHH
Q 013076 386 PGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALR 430 (450)
Q Consensus 386 p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~ 430 (450)
|++.+|+|. ..+|+++|++.++++...++++..++.+
T Consensus 284 pt~~lG~~~--------~~~Hs~~E~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 284 DWCFIGAPE--------KDAHTPNECVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp BCCBEECEE--------BSTTSTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred CEEEEchhh--------cccchhhhheeHHHHHHHHHHHHHHHHh
Confidence 987655442 3499999999999999999999998865
No 39
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.86 E-value=2.8e-20 Score=181.85 Aligned_cols=250 Identities=14% Similarity=0.100 Sum_probs=173.1
Q ss_pred HHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCCCC--------c-----
Q 013076 59 GIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPL--------Q----- 125 (450)
Q Consensus 59 ~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~--------~----- 125 (450)
++|++|++|||+|++|.++++||+++|+++|++++.+ ..+|+++.+++...|+|+|.||+|||+. +
T Consensus 7 ~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~v~~d-~~gnlia~~~g~~~~~vll~aH~DtV~~~v~~i~~~G~~~~~ 85 (348)
T 1ylo_A 7 SLLKALSEADAIASSEQEVRQILLEEAARLQKEVRFD-GLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 85 (348)
T ss_dssp HHHHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEEC-TTCCEEEECCCCSSCEEEEEEECCCCEEEEEEECTTCCEEEE
T ss_pred HHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEe-cCCCEEEEecCCCCceEEEEEcCCccceEEEEECCCCeEEEE
Confidence 7899999999999999999999999999999998754 4579999986544589999999999951 0
Q ss_pred CcCCCcc---------------------------------------------------------------ccCCCCceec
Q 013076 126 EMVEWEY---------------------------------------------------------------KSKIPGKMHA 142 (450)
Q Consensus 126 ~~~~w~~---------------------------------------------------------------~~~~~g~l~G 142 (450)
....|.+ ....+|+++|
T Consensus 86 ~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~ 165 (348)
T 1ylo_A 86 PVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 165 (348)
T ss_dssp EESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEE
T ss_pred ecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEe
Confidence 0001210 0114688999
Q ss_pred ccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEeccCCCCCCceEEeecCc
Q 013076 143 CGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGP 219 (450)
Q Consensus 143 rG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g~~~~~~g~ 219 (450)
|+. |+++++++.+++.+++.+ ++.++.++|+++|| |+.|++..... . .+|+++..+... .+
T Consensus 166 ~~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~~-i--~~~~~i~~D~~~---~~-------- 229 (348)
T 1ylo_A 166 KAFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGLRGGQTATRA-V--SPDVAIVLDTAC---WA-------- 229 (348)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSSHHHHHHHHH-H--CCSEEEEECCCC---CS--------
T ss_pred cCcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccchhHHHHhhcc-c--CCCEEEEEeccc---cC--------
Confidence 977 799999999999987643 66899999999999 77887765431 1 346666543211 00
Q ss_pred ccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCCeEEEEEEEe
Q 013076 220 LLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFR 299 (450)
Q Consensus 220 ~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~idiR 299 (450)
..|. .+. .. . ..++ .
T Consensus 230 -------------------~~~~--~~~-----------~~----~-~~~~----------~------------------ 244 (348)
T 1ylo_A 230 -------------------KNFD--YGA-----------AN----H-RQIG----------N------------------ 244 (348)
T ss_dssp -------------------STTC--CST-----------TC----C-CCTT----------S------------------
T ss_pred -------------------CCCC--CCc-----------cc----c-ccCC----------C------------------
Confidence 0111 010 00 0 0000 0
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccCCCcccchHH
Q 013076 300 AFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFS 379 (450)
Q Consensus 300 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~ 379 (450)
|..+++.. . ....|+.+++.+++++++. |.+... ....+|+||++
T Consensus 245 -------------------------G~~i~~~~-----~---~~~~~~~l~~~~~~~a~~~-gi~~~~-~~~~~ggsDa~ 289 (348)
T 1ylo_A 245 -------------------------GPMLVLSD-----K---SLIAPPKLTAWIETVAAEI-GVPLQA-DMFSNGGTDGG 289 (348)
T ss_dssp -------------------------CCEEEEEC-----S---SCBCCHHHHHHHHHHHHHH-TCCCEE-EECSSCCCHHH
T ss_pred -------------------------CcEEEEeC-----C---CCCCCHHHHHHHHHHHHHc-CCCeEE-eecCCCcchHH
Confidence 11112111 1 1235788999999999987 876642 13468999999
Q ss_pred HHhh--h-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHHh
Q 013076 380 FYQE--V-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 380 ~~~~--~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
.+.. . +|++++|+|. ..+|+++|+++++++..+++++..++..+.+
T Consensus 290 ~~~~~~~gipt~~lg~~~--------~~~Hs~~E~~~~~d~~~~~~ll~~~~~~l~~ 338 (348)
T 1ylo_A 290 AVHLTGTGVPTLVMGPAT--------RHGHCAASIADCRDILQMEQLLSALIQRLTR 338 (348)
T ss_dssp HHHTSTTCCCEEEEECCC--------BSCSSSCEEEEHHHHHHHHHHHHHHHHTCCH
T ss_pred HHHHhcCCCCEEEECccc--------CcCCCcceEeeHHHHHHHHHHHHHHHHHhhH
Confidence 9964 3 9988755442 2499999999999999999999999887653
No 40
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.81 E-value=2.4e-18 Score=163.08 Aligned_cols=119 Identities=13% Similarity=0.071 Sum_probs=103.5
Q ss_pred HHHHHHHHHhHcCCCCCc--------chHHHHHHHHHHHHhcCCceecccC------CceEEEEEcCC-CCceEEEEeec
Q 013076 55 GWMIGIRRKIHQNPELGY--------QEFETSQLIRSELDKMGIKYKHPVA------VTGVVGFIGTG-EPPFVALRADM 119 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~--------~e~~~~~~l~~~l~~~G~~~~~~~~------~~nvva~~~~~-~~~~ill~~H~ 119 (450)
+++++++++|++|||+++ .|.++++||+++|+++|++++.... .+||++++++. ++++|+|.+|+
T Consensus 7 ~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~~~~i~l~aH~ 86 (284)
T 1tkj_A 7 ANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDPNKVLMAGAHL 86 (284)
T ss_dssp HHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCCCCEEEEEeec
Confidence 678999999999999886 6789999999999999999876422 46999999764 35889999999
Q ss_pred cCCCCcCcCCCccccCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHc
Q 013076 120 DSLPLQEMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEA 190 (450)
Q Consensus 120 DvVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~ 190 (450)
|+||. |||+ |++++++|.+++.|++.+.+++++|+|+|+++|| |..|+++++++
T Consensus 87 D~v~~-----------------g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 144 (284)
T 1tkj_A 87 DSVSS-----------------GAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYVNN 144 (284)
T ss_dssp CCCTT-----------------SCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHH
T ss_pred CCCCC-----------------CCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCcCHHHHHhh
Confidence 99985 3554 7999999999999998877889999999999999 77899999875
No 41
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.75 E-value=1.3e-16 Score=154.85 Aligned_cols=246 Identities=15% Similarity=0.134 Sum_probs=171.0
Q ss_pred HHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCC--CCceEEEEeeccCCCC-----cC--
Q 013076 56 WMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG--EPPFVALRADMDSLPL-----QE-- 126 (450)
Q Consensus 56 ~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~--~~~~ill~~H~DvVp~-----~~-- 126 (450)
+++++|++|+++||+|+.|.++++|++++|+++|++++++ ..+|+++++++. ++|+|+|.||||+|+. .+
T Consensus 4 ~~~~~l~~L~~ips~SG~E~~v~~~l~~~l~~~g~~~~~D-~~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~I~~~G 82 (355)
T 3kl9_A 4 TLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTD-GLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPDG 82 (355)
T ss_dssp HHHHHHHHHHTSCCBTTCCHHHHHHHHHHHGGGSSEEEEC-TTSCEEEEECCCSTTCCEEEEEEECCBCEEEEEEECTTS
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCEEEEC-CCCeEEEEECCcCCCCCeEEEEeccccccceEEEECCCC
Confidence 5789999999999999999999999999999999998865 477999999764 3699999999999942 11
Q ss_pred ------cCCCccc----------cC-------------------------------------------------------
Q 013076 127 ------MVEWEYK----------SK------------------------------------------------------- 135 (450)
Q Consensus 127 ------~~~w~~~----------~~------------------------------------------------------- 135 (450)
-.+|... ..
T Consensus 83 ~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~ 162 (355)
T 3kl9_A 83 TFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIV 162 (355)
T ss_dssp CEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCTTCEEE
T ss_pred EEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEE
Confidence 0123100 00
Q ss_pred --------C-CCceecccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEec
Q 013076 136 --------I-PGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLH 203 (450)
Q Consensus 136 --------~-~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~ 203 (450)
. ++.+.|+.- +.++++++.+++.+++. +++.++.++|+..|| |..|++..... . .+|.+|+.+
T Consensus 163 ~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~~v~~~ft~qEEvG~~Ga~~a~~~-~--~pd~~i~~D 237 (355)
T 3kl9_A 163 PDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGNELYLGSNVQEEVGLRGAHTSTTK-F--DPEVFLAVD 237 (355)
T ss_dssp ECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSSEEEEEEESCCTTTSHHHHHHHHH-H--CCSEEEEEE
T ss_pred eccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEECccccCcchhHHHHhc-c--CCCEEEEec
Confidence 0 023445544 58899999999888754 478999999999999 77787655332 1 245544432
Q ss_pred cCCCCCCceEEeecCcccccceEEEEEEEecCCCCCC-CCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecC
Q 013076 204 VDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAI-PQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGG 282 (450)
Q Consensus 204 ~~~~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~-p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG 282 (450)
.. |+.. |.. . .
T Consensus 238 ~~-------------------------------~a~d~p~~----------------~------~--------------- 249 (355)
T 3kl9_A 238 CS-------------------------------PAGDVYGG----------------Q------G--------------- 249 (355)
T ss_dssp EE-------------------------------ECCGGGTS----------------S------C---------------
T ss_pred Cc-------------------------------cCCCCCCc----------------c------c---------------
Confidence 10 1110 100 0 0
Q ss_pred CCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcC
Q 013076 283 GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLD 362 (450)
Q Consensus 283 ~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g 362 (450)
..|....+... .. ....|+.+.+.+++++++. |
T Consensus 250 ----------------------------------------~lg~G~~i~~~---d~---~~~~~~~l~~~l~~~a~~~-g 282 (355)
T 3kl9_A 250 ----------------------------------------KIGDGTLIRFY---DP---GHLLLPGMKDFLLTTAEEA-G 282 (355)
T ss_dssp ----------------------------------------CTTSCEEEEEE---ET---TEECCHHHHHHHHHHHHHT-T
T ss_pred ----------------------------------------ccCCCcEEEEe---cC---CCCCCHHHHHHHHHHHHHc-C
Confidence 00111122221 11 1234788999999999987 8
Q ss_pred CccccccCCCcccchHHHHhh--h-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 363 TQKVKVMAPVMGSEDFSFYQE--V-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 363 ~~~~~~~~~~~g~tD~~~~~~--~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
.+... ...+|+||++.+.. . +|++.++++.. .+|++.|+++++++..+++++.+++.++.
T Consensus 283 Ip~q~--~~~ggGtDa~~i~~a~~Gipt~~igvp~~--------~~Hs~~E~~~~~Di~~~~~ll~~~l~~l~ 345 (355)
T 3kl9_A 283 IKYQY--YCGKGGTDAGAAHLKNGGVPSTTIGVCAR--------YIHSHQTLYAMDDFLEAQAFLQALVKKLD 345 (355)
T ss_dssp CCEEE--EECSSCCTHHHHTTSTTCCCEEEEEEEEB--------SCSSSCEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEE--ECCCcchHHHHHHHhCCCCCEEEEccCcC--------CCCCcceEeeHHHHHHHHHHHHHHHHHhC
Confidence 87642 34568999999875 3 99988777653 39999999999999999999999987653
No 42
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.71 E-value=9.6e-17 Score=153.19 Aligned_cols=140 Identities=14% Similarity=0.149 Sum_probs=111.7
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhHcCCC---CCcchHHHHHHHHHHHHhcCC--c-eeccc------CCceEEEEEcCC
Q 013076 41 PKKLLNFAKRQELVGWMIGIRRKIHQNPE---LGYQEFETSQLIRSELDKMGI--K-YKHPV------AVTGVVGFIGTG 108 (450)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~l~~l~~ips---~s~~e~~~~~~l~~~l~~~G~--~-~~~~~------~~~nvva~~~~~ 108 (450)
+.++.+.+.... .+++++++++|++||+ .++.|.++++||+++|+++|+ + ++.+. ..+||++++++.
T Consensus 7 ~~~~~~~~~~~~-~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~ 85 (299)
T 1rtq_A 7 QATVTAWLPQVD-ASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGS 85 (299)
T ss_dssp HHHHHHHGGGCC-HHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCS
T ss_pred hHHHHHHHHhcC-HHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECC
Confidence 344455554432 2779999999999995 456788999999999999874 3 32221 247999999664
Q ss_pred --CCceEEEEeeccCCCCcCcCCCccccCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc
Q 013076 109 --EPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGG 182 (450)
Q Consensus 109 --~~~~ill~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~ 182 (450)
+.++|+|.||+||||. .|+. +++||||+ |++++++|.+++.|++.+.+++++|.|+|+++|| |..
T Consensus 86 ~~~~~~v~l~aH~D~v~~----~~~~-----~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~ 156 (299)
T 1rtq_A 86 EAPDEWIVIGGHLDSTIG----SHTN-----EQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEVGLR 156 (299)
T ss_dssp SEEEEEEEEEEECCCCSS----TTCC-----TTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSH
T ss_pred CCCCCEEEEEeccccCCC----cCcC-----CCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCccCCch
Confidence 2478999999999983 4643 67899998 7999999999999998877889999999999999 778
Q ss_pred chHHHHHc
Q 013076 183 GAHKVLEA 190 (450)
Q Consensus 183 Ga~~l~~~ 190 (450)
|+++++++
T Consensus 157 Gs~~~~~~ 164 (299)
T 1rtq_A 157 GSQDLANQ 164 (299)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHh
Confidence 99998875
No 43
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.66 E-value=4.6e-15 Score=143.80 Aligned_cols=244 Identities=14% Similarity=0.111 Sum_probs=163.2
Q ss_pred HHHHHHHhHcCCCCCcchH-HHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCCCC-----cC----
Q 013076 57 MIGIRRKIHQNPELGYQEF-ETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPL-----QE---- 126 (450)
Q Consensus 57 ~~~~l~~l~~ips~s~~e~-~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~-----~~---- 126 (450)
++++|++|++|||+|+.|. ++++|++++|+++|++++++ ..+|+++++++.+ |+|+|.||||+|+. .+
T Consensus 11 ~~~~l~~L~~ipspSG~E~~~v~~~l~~~l~~~g~~~~~D-~~GNvi~~~~g~~-~~v~l~aHmDtVg~mV~~I~~~G~l 88 (354)
T 2vpu_A 11 DWKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVD-KLGNVIAHFKGSS-PRIMVAAHMDKIGVMVNHIDKDGYL 88 (354)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTCSEEEEC-TTCCEEEEECCSS-SEEEEECCCCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHhCCCCCcccHHHHHHHHHHHHHHhCCEEEEc-CCCeEEEEEcCCC-CEEEEEecccccceeEEEECCCCEE
Confidence 6789999999999999999 99999999999999988865 4789999997654 99999999999953 11
Q ss_pred ----cCCCccc-----------------------c------C-C------------------------------------
Q 013076 127 ----MVEWEYK-----------------------S------K-I------------------------------------ 136 (450)
Q Consensus 127 ----~~~w~~~-----------------------~------~-~------------------------------------ 136 (450)
-.+|... + . +
T Consensus 89 ~~~~iGG~~~~~~~~~~v~i~t~~g~~~Gvi~~~~~H~~~~~~~~~~~~~~~~l~iD~g~~s~ee~~~~GI~~Gd~v~~d 168 (354)
T 2vpu_A 89 HIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSKEEAEEMGFRVGTVGEFA 168 (354)
T ss_dssp EEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCSTTC---------CCGGGCCEECSCSSHHHHHHTTCCTTCEEEEC
T ss_pred EEEccCCcccccccCCEEEEEcCCCcEEEEEcCCCccccCcccccccCCCcceEEEEecCCCHHHHHhcCCCCCCEEEEe
Confidence 0233100 0 0 0
Q ss_pred -------CCceecccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEeccCC
Q 013076 137 -------PGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDP 206 (450)
Q Consensus 137 -------~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~ 206 (450)
++++.++.- +.++++++.+++.+++ ++.++.++|+..|| |+.|++..... . .+|.+|+.+..
T Consensus 169 ~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~----~~~~v~~~ft~qEEVG~~ga~~aa~~-i--~pd~~i~~Dv~- 240 (354)
T 2vpu_A 169 PNFTRLNEHRFATPYLDDRICLYAMIEAARQLGD----HEADIYIVGSVQEEVGLRGARVASYA-I--NPEVGIAMDVT- 240 (354)
T ss_dssp CCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCC----CSSEEEEEECSCCTTTSHHHHHHHHH-H--CCSEEEEEEEE-
T ss_pred eEEEEeCCceEEEecCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccCccchhhhhcc-c--CCCEEEEeccc-
Confidence 022334433 4778888877776643 67899999999999 77777654321 1 24544443210
Q ss_pred CCCCceEEeecCcccccceEEEEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCC
Q 013076 207 NLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFN 286 (450)
Q Consensus 207 ~~~~g~~~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~n 286 (450)
|+..|... ... ...+..|.
T Consensus 241 ------------------------------~a~dp~~~-------------------~~~---------~~~lg~Gp--- 259 (354)
T 2vpu_A 241 ------------------------------FAKQPHDK-------------------GKI---------VPELGKGP--- 259 (354)
T ss_dssp ------------------------------ECCCTTST-------------------TCC---------CCCTTSCC---
T ss_pred ------------------------------ccCCCCcc-------------------ccc---------CceECCcc---
Confidence 11112100 000 00001110
Q ss_pred CCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccc
Q 013076 287 VIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKV 366 (450)
Q Consensus 287 viP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~ 366 (450)
.+| . . ...|+.+.+.+++++++. |.+..
T Consensus 260 --------v~d----------------------------------~----~-----~~~~~~l~~~l~~~a~~~-gIp~q 287 (354)
T 2vpu_A 260 --------VMD----------------------------------V----G-----PNINPKLRAFADEVAKKY-EIPLQ 287 (354)
T ss_dssp --------EEE----------------------------------E----S-----TTSCHHHHHHHHHHHHHT-TCCCE
T ss_pred --------eEc----------------------------------C----C-----CCCCHHHHHHHHHHHHHc-CCCcE
Confidence 011 0 1 124778899999999887 87664
Q ss_pred cccCCCc-ccchHHHHhh--h-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHHHHHH
Q 013076 367 KVMAPVM-GSEDFSFYQE--V-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLALRYL 432 (450)
Q Consensus 367 ~~~~~~~-g~tD~~~~~~--~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 432 (450)
.. ...+ |+||++.+.. . +|++.++++.. .+|++.|+++++++..+++++..++.++.
T Consensus 288 ~~-~~~g~gGtDa~~i~~a~~Gipt~~Igvp~~--------~~Hs~~E~~~~~D~~~~~~ll~~~l~~l~ 348 (354)
T 2vpu_A 288 VE-PSPRPTGTDANVMQINKEGVATAVLSIPIR--------YMHSQVELADARDVDNTIKLAKALLEELK 348 (354)
T ss_dssp EE-ECCSCCSSTHHHHHTSTTCCEEEEEEEEEB--------STTSTTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred EE-eCCCCCccHHHHHHHhcCCCCEEEECcccc--------cCcCcceEeeHHHHHHHHHHHHHHHHhcc
Confidence 22 2234 7999999864 3 89988777653 39999999999999999999999987763
No 44
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.63 E-value=5.7e-15 Score=140.89 Aligned_cols=130 Identities=17% Similarity=0.096 Sum_probs=104.9
Q ss_pred HHHHHHHHHhHcCCC---CCcchHHHHHHHHHHHHhcCCceeccc-------C----CceEEEEEcCCCCceEEEEeecc
Q 013076 55 GWMIGIRRKIHQNPE---LGYQEFETSQLIRSELDKMGIKYKHPV-------A----VTGVVGFIGTGEPPFVALRADMD 120 (450)
Q Consensus 55 ~~~~~~l~~l~~ips---~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~----~~nvva~~~~~~~~~ill~~H~D 120 (450)
+.+.+.+++|+++.+ .|..+.++++||.++|+++|++++... + ..||+|++++.+.+.|+|.+|+|
T Consensus 25 ~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 104 (309)
T 3tc8_A 25 DSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPENSKRVLLFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEeccc
Confidence 557777788877643 355678999999999999999987521 1 37999999876568999999999
Q ss_pred CCCCcCcCCCccccCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-------------cc
Q 013076 121 SLPLQEMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG-------------GG 183 (450)
Q Consensus 121 vVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~-------------~G 183 (450)
+||.++. .|+. ..++++| +|+ ++++|++|.+++.|++.+ ++++|.|+|..+|| |. .|
T Consensus 105 sv~~~~~--~p~~-~~~~~~~-~Ga~D~~sGva~~Le~ar~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~G 178 (309)
T 3tc8_A 105 SRPYSDH--DPDP-SKHRTPL-DGADDGGSGVGALLEIARQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLG 178 (309)
T ss_dssp CCSCCTT--CSSG-GGTTSCC-CCTTTTHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCHH
T ss_pred CCCCCCC--Cccc-cCCCccc-cCcccchHhHHHHHHHHHHHHhCC--CCCcEEEEEECccccccccccccccccccchh
Confidence 9997642 2443 3467777 887 689999999999998874 88999999999999 76 89
Q ss_pred hHHHHHc
Q 013076 184 AHKVLEA 190 (450)
Q Consensus 184 a~~l~~~ 190 (450)
++++.++
T Consensus 179 S~~~~~~ 185 (309)
T 3tc8_A 179 TQFWAKN 185 (309)
T ss_dssp HHHHHHS
T ss_pred HHHHHhC
Confidence 9999875
No 45
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=99.61 E-value=2.3e-14 Score=137.87 Aligned_cols=244 Identities=17% Similarity=0.134 Sum_probs=159.6
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceecccCCceEEEEEcCCCCceEEEEeeccCCCC-----cC---
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPL-----QE--- 126 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvva~~~~~~~~~ill~~H~DvVp~-----~~--- 126 (450)
..+.++|++|+++||+||.|.++++|++++|+++|.+++++ ..+|+++.+++ ++|+|+|.||||+|.. .+
T Consensus 11 ~~~~~~l~~L~~~pspSG~E~~v~~~i~~~l~~~~~e~~~D-~~Gnvi~~~g~-~~~~v~l~aHmDevG~mV~~I~~~G~ 88 (343)
T 3isx_A 11 HHMKELIRKLTEAFGPSGREEEVRSIILEELEGHIDGHRID-GLGNLIVWKGS-GEKKVILDAHIDEIGVVVTNVDDKGF 88 (343)
T ss_dssp SCCHHHHHHHHHSCCBTTCCHHHHHHHHHHHTTTCSEEEEC-TTCCEEEEECC-CSSEEEEEEECCBCEEEEEEECTTSC
T ss_pred HHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhCCEEEEC-CCCCEEEEECC-CCCEEEEEecccccceEEEEECCCCe
Confidence 44678999999999999999999999999999999988765 46799999854 4599999999999932 11
Q ss_pred -----cCCCccc--------------------c---------------------------------CC------------
Q 013076 127 -----MVEWEYK--------------------S---------------------------------KI------------ 136 (450)
Q Consensus 127 -----~~~w~~~--------------------~---------------------------------~~------------ 136 (450)
-.+|... + +.
T Consensus 89 l~~~~vGG~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~~~~~~~l~iD~g~~s~ee~~~~I~vGd~v~~~~~~~ 168 (343)
T 3isx_A 89 LTIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVRKLSFDKLFIDIGANSREEAQKMCPIGSFGVYDSGFV 168 (343)
T ss_dssp EEEEEESSCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHHTCCGGGEEEECSCSSHHHHHHHSCTTCEEEESCCCE
T ss_pred EEEEecCCcCccccCCcEEEEeccEEEEEecccccccChhhcccCCCcceEEEEeCCCCHHHHHhcCCCCCEEEecCceE
Confidence 0133100 0 00
Q ss_pred --CCceecccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcccccccceEEEeccCCCCCCc
Q 013076 137 --PGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIG 211 (450)
Q Consensus 137 --~g~l~GrG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~~~~~~d~~i~~~~~~~~~~g 211 (450)
++++.|+.- +.++++++.+++.++ .+.++.++|+..|| |..|++..... . .+|.+|+.+..
T Consensus 169 ~~~~~i~s~~lDdR~g~~~~l~~l~~l~-----~~~~~~~~ft~qEEVG~~Ga~~aa~~-i--~pd~~i~vDv~------ 234 (343)
T 3isx_A 169 EVSGKYVSKAMDDRIGCAVIVEVFKRIK-----PAVTLYGVFSVQEEVGLVGASVAGYG-V--PADEAIAIDVT------ 234 (343)
T ss_dssp EETTEEEESCHHHHHHHHHHHHHHHHCC-----CSSEEEEEEECCCCTTSCCSTTTGGG-C--CCSEEEEEEEE------
T ss_pred EeccEEEeccCccHHHHHHHHHHHHhcc-----CCCeEEEEEECCcccCchhHHHHhhc-C--CCCEEEEEeCc------
Confidence 033444544 577887777776653 25789999999999 77776543221 1 23444432210
Q ss_pred eEEeecCcccccceEEEEEEEecCCCCCC-CCCCCcHHHHHHHHHHHHhhhhcccCCCCCCceEEEEEEecCCCCCCCCC
Q 013076 212 EVASRPGPLLAGSGFFEAVIGGKGGHAAI-PQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPD 290 (450)
Q Consensus 212 ~~~~~~g~~~~G~~~~~i~v~G~~~Hss~-p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~ 290 (450)
|+.. |.... + . . .
T Consensus 235 -------------------------~a~d~p~~~~--------------~----~-~---------~------------- 248 (343)
T 3isx_A 235 -------------------------DSADTPKAIK--------------R----H-A---------M------------- 248 (343)
T ss_dssp -------------------------ECCCSTTCCC--------------T----T-C---------C-------------
T ss_pred -------------------------CCCCCCCccc--------------c----c-c---------c-------------
Confidence 1111 10000 0 0 0 0
Q ss_pred eEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCChHHHHHHHHHHHhhcCCccccccC
Q 013076 291 SVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMA 370 (450)
Q Consensus 291 ~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~ 370 (450)
..|....+.. ... ....|+.+.+.+++++++. |.+.+. ..
T Consensus 249 --------------------------------~lg~GpvI~~----~d~--~~~~d~~l~~~l~~~A~~~-gIp~Q~-~v 288 (343)
T 3isx_A 249 --------------------------------RLSGGPALKV----KDR--ASISSKRILENLIEIAEKF-DIKYQM-EV 288 (343)
T ss_dssp --------------------------------CTTSCCEEEC----BTT--CCHHHHHHHHHHHHHHHHT-TCCCEE-CC
T ss_pred --------------------------------ccCCCcEEEE----cCC--CCCCCHHHHHHHHHHHHHC-CCCeEE-ec
Confidence 0011111222 111 1234677888898888887 877642 13
Q ss_pred CCcccchHHHHhh--h-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHHHH
Q 013076 371 PVMGSEDFSFYQE--V-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHASLA 428 (450)
Q Consensus 371 ~~~g~tD~~~~~~--~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~ 428 (450)
..+|+||++.+.. . +|++.+++|.. .+|++.|+++++++..+++++.+++
T Consensus 289 ~~ggGTDa~~i~~a~~Gipt~~Igvp~r--------~~Hs~~E~~~~~Di~~~~~ll~~~l 341 (343)
T 3isx_A 289 LTFGGTNAMGYQRTREGIPSATVSIPTR--------YVHSPSEMIAPDDVEATVDLLIRYL 341 (343)
T ss_dssp CBCCCSSHHHHHHHTSSCCEEEEEEEEB--------STTSTTEEECHHHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHhcCCCCEEEEccccc--------cccchhhEecHHHHHHHHHHHHHHH
Confidence 3468999988764 3 99999888754 3999999999999999999998875
No 46
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.59 E-value=1.7e-14 Score=137.68 Aligned_cols=130 Identities=18% Similarity=0.121 Sum_probs=94.5
Q ss_pred HHHHHHHHHhHcCCCC---CcchHHHHHHHHHHHHhcCCceeccc-------C----CceEEEEEcCCCCceEEEEeecc
Q 013076 55 GWMIGIRRKIHQNPEL---GYQEFETSQLIRSELDKMGIKYKHPV-------A----VTGVVGFIGTGEPPFVALRADMD 120 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~---s~~e~~~~~~l~~~l~~~G~~~~~~~-------~----~~nvva~~~~~~~~~ill~~H~D 120 (450)
+++.+++++|++|++. |..+.++++||.++|+++|+++++.. + ..||+|++++.+.+.|+|.+|+|
T Consensus 27 ~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 106 (314)
T 3gux_A 27 DSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPESKKRILLCAHWD 106 (314)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEcccc
Confidence 6688899999988753 44678899999999999999886521 1 37999999876568999999999
Q ss_pred CCCCcCcCCCccccCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc--------------c
Q 013076 121 SLPLQEMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG--------------G 182 (450)
Q Consensus 121 vVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~--------------~ 182 (450)
+||.++. -|+. ..++. +++|+ ++++|++|.+++.|++.+ ++++|.|++..+|| |. .
T Consensus 107 sv~~~~~--~p~~-~~~~~-~~~GA~D~~sGva~~Le~ar~l~~~~--~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~ 180 (314)
T 3gux_A 107 SRPYADN--DPDP-KNHHT-PILGVNDGASGVGVLLEIARQIQKEQ--PALGIDIVFFDSEDYGIPEFYDGKYKQDTWCL 180 (314)
T ss_dssp CCC------------------------CHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCCC-----------CTTSCH
T ss_pred CCCcCCC--Cccc-ccCCc-ccCCCcccHHHHHHHHHHHHHHHhCC--CCCcEEEEEECCccccccccccccccccccch
Confidence 9997642 1322 22333 45887 799999999999998864 88999999999999 76 8
Q ss_pred chHHHHHc
Q 013076 183 GAHKVLEA 190 (450)
Q Consensus 183 Ga~~l~~~ 190 (450)
|++++.++
T Consensus 181 GS~~~~~~ 188 (314)
T 3gux_A 181 GSQYWART 188 (314)
T ss_dssp HHHHHHHS
T ss_pred hHHHHHhC
Confidence 99999875
No 47
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.52 E-value=5.7e-14 Score=135.57 Aligned_cols=126 Identities=13% Similarity=0.195 Sum_probs=99.8
Q ss_pred HHH-HHHHHHhHcCCCC-CcchHHHHHHHHHHHHh--cCCceeccc----------CCceEEEEEcCCCCceEEEEeecc
Q 013076 55 GWM-IGIRRKIHQNPEL-GYQEFETSQLIRSELDK--MGIKYKHPV----------AVTGVVGFIGTGEPPFVALRADMD 120 (450)
Q Consensus 55 ~~~-~~~l~~l~~ips~-s~~e~~~~~~l~~~l~~--~G~~~~~~~----------~~~nvva~~~~~~~~~ill~~H~D 120 (450)
+.+ .+++++|+..+.. +..+.++++||.++|++ +|++++... ...||+|++++.+.+.|++.+|+|
T Consensus 31 ~~~~~~~l~~L~~~r~~~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~~~~~i~l~aH~D 110 (329)
T 2afw_A 31 SEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPTAKRHLVLACHYD 110 (329)
T ss_dssp HHHHHHTTGGGCSCCCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTTSSEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCCCCcEEEEEEecc
Confidence 668 8889999755544 33456799999999999 999887532 147999999776558999999999
Q ss_pred CCCCcCcCCCccccCCCCceecccc---hHHHHHHHHHHHHHHhc--------cccCCceEEEEEecCCCC--------c
Q 013076 121 SLPLQEMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEH--------REELKGTVVLVFQPAEEG--------G 181 (450)
Q Consensus 121 vVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~--------~~~~~~~i~~~~~~dEEg--------~ 181 (450)
+||.+ .|. |++ ++|+ ++|+|++|.+++.|++. +.+++++|.|++..+||. +
T Consensus 111 sv~~~---~~~------~~~-~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~g 180 (329)
T 2afw_A 111 SKYFS---HWN------NRV-FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDS 180 (329)
T ss_dssp CCCCC---CBT------TBC-CCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSS
T ss_pred CCCcC---ccc------CcC-CCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcccccccCCCcc
Confidence 99975 452 554 7888 79999999999999876 246889999999999995 3
Q ss_pred -cchHHHHHc
Q 013076 182 -GGAHKVLEA 190 (450)
Q Consensus 182 -~Ga~~l~~~ 190 (450)
.|+++++++
T Consensus 181 l~Gs~~~~~~ 190 (329)
T 2afw_A 181 LYGSRHLAAK 190 (329)
T ss_dssp CHHHHHHHHH
T ss_pred chhHHHHHHH
Confidence 699988775
No 48
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.23 E-value=1.8e-10 Score=110.01 Aligned_cols=130 Identities=16% Similarity=0.174 Sum_probs=97.4
Q ss_pred HHHHHHHHHhHcC-CCCCc--chHHHHHHHHHHHHhcCCceecc-------c----CCceEEEEEcCCCCceEEEEeecc
Q 013076 55 GWMIGIRRKIHQN-PELGY--QEFETSQLIRSELDKMGIKYKHP-------V----AVTGVVGFIGTGEPPFVALRADMD 120 (450)
Q Consensus 55 ~~~~~~l~~l~~i-ps~s~--~e~~~~~~l~~~l~~~G~~~~~~-------~----~~~nvva~~~~~~~~~ill~~H~D 120 (450)
+.+.+.++.|+++ |.+.+ ...++++||.++|+++|++++.. . ...||||++++...+.|+|.+|+|
T Consensus 25 ~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~~~~i~l~aH~D 104 (309)
T 4fuu_A 25 DSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPESKKRIALFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCCCceEEEEeecC
Confidence 6688888888886 44544 34679999999999999998641 1 135899999877568999999999
Q ss_pred CCCCcCcCCCccccCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc--------------c
Q 013076 121 SLPLQEMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG--------------G 182 (450)
Q Consensus 121 vVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~--------------~ 182 (450)
++|..+...... ++.....|+ -+|+|++|.+++.|++. +++.+|.|+|...|| |. .
T Consensus 105 s~~~~~~~~~~~----~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~ 178 (309)
T 4fuu_A 105 TRPWADNDADEK----NHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCL 178 (309)
T ss_dssp CCSCCTTCSSGG----GTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCH
T ss_pred CCCCCCCccccc----cccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEeecccccCccccccchhhhhhhhc
Confidence 998754221111 112234566 37999999999999875 578999999999999 53 5
Q ss_pred chHHHHHc
Q 013076 183 GAHKVLEA 190 (450)
Q Consensus 183 Ga~~l~~~ 190 (450)
|++++.+.
T Consensus 179 GS~~~~~~ 186 (309)
T 4fuu_A 179 GSQYWSRN 186 (309)
T ss_dssp HHHHHHHS
T ss_pred chhHHHhc
Confidence 77777764
No 49
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.19 E-value=6.8e-11 Score=113.22 Aligned_cols=124 Identities=16% Similarity=0.196 Sum_probs=92.8
Q ss_pred HHHHH-HHHHhHcCCCC--CcchHHHHHHHHHHHHhc--CCceecccC----------CceEEEEEcCCCCceEEEEeec
Q 013076 55 GWMIG-IRRKIHQNPEL--GYQEFETSQLIRSELDKM--GIKYKHPVA----------VTGVVGFIGTGEPPFVALRADM 119 (450)
Q Consensus 55 ~~~~~-~l~~l~~ips~--s~~e~~~~~~l~~~l~~~--G~~~~~~~~----------~~nvva~~~~~~~~~ill~~H~ 119 (450)
+.+.+ +|+.+ -+|.. |..+.++++||.++|+++ |++++.+.- ..||+|++++...+.|++.+|+
T Consensus 39 ~~~~~~~L~~~-~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~~~~ivl~aH~ 117 (330)
T 3pb6_X 39 QRLWSTYLRPL-LVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRAARHLTLACHY 117 (330)
T ss_dssp HHHHHHTTGGG-CSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTSSEEEEEEEEC
T ss_pred HHHHHHHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCCCceEEEEecc
Confidence 44554 56655 34444 345678999999999999 888765321 2699999987655899999999
Q ss_pred cCCCCcCcCCCccccCCCCceecccc---hHHHHHHHHHHHHHHhc-----cccCCceEEEEEecCCCC--------c-c
Q 013076 120 DSLPLQEMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEH-----REELKGTVVLVFQPAEEG--------G-G 182 (450)
Q Consensus 120 DvVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~-----~~~~~~~i~~~~~~dEEg--------~-~ 182 (450)
|+||..+ |.-...|+ .+|+|++|.+++.|++. +.+++.+|.|+|..+||+ + .
T Consensus 118 Dsv~~~~-----------g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~ 186 (330)
T 3pb6_X 118 DSKLFPP-----------GSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLY 186 (330)
T ss_dssp CCCCCCT-----------TSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCH
T ss_pred CCCCCCC-----------CCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCc
Confidence 9997421 11134565 48999999999999873 357889999999999996 5 6
Q ss_pred chHHHHHc
Q 013076 183 GAHKVLEA 190 (450)
Q Consensus 183 Ga~~l~~~ 190 (450)
|++++.++
T Consensus 187 GS~~~a~~ 194 (330)
T 3pb6_X 187 GSRHLAQL 194 (330)
T ss_dssp HHHHHHHH
T ss_pred cHHHHHHH
Confidence 99988764
No 50
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.15 E-value=2.8e-10 Score=109.01 Aligned_cols=122 Identities=20% Similarity=0.196 Sum_probs=92.2
Q ss_pred HHHHHHHhHcCCCCCcc--hHHHHHHHHHHHHhcCCceeccc-----------CCceEEEEEcCCCCceEEEEeeccCCC
Q 013076 57 MIGIRRKIHQNPELGYQ--EFETSQLIRSELDKMGIKYKHPV-----------AVTGVVGFIGTGEPPFVALRADMDSLP 123 (450)
Q Consensus 57 ~~~~l~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nvva~~~~~~~~~ill~~H~DvVp 123 (450)
+-++|+.++ +|.+.|. ..++++||.++|+++|++++... ...||||++++...+.|++.+|+|+++
T Consensus 13 ~~~~l~~il-~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~~~~vvl~aHyDs~~ 91 (312)
T 4f9u_A 13 FNRTLDSIL-VPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYDSKY 91 (312)
T ss_dssp HHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTSSEEEEEEEECCCCC
T ss_pred HHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCCCceEEEEEEEecCC
Confidence 344555553 6776664 46799999999999999986421 125999999876568899999999997
Q ss_pred CcCcCCCccccCCCCceecccc---hHHHHHHHHHHHHHHhc-----cccCCceEEEEEecCCC-C--------ccchHH
Q 013076 124 LQEMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEH-----REELKGTVVLVFQPAEE-G--------GGGAHK 186 (450)
Q Consensus 124 ~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~-----~~~~~~~i~~~~~~dEE-g--------~~Ga~~ 186 (450)
.++.. -..|+ -+|+|++|.+++.|.+. +.+++++|.|+|..+|| | ..|+++
T Consensus 92 ~~~~~------------~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~ 159 (312)
T 4f9u_A 92 FPNDP------------GFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKH 159 (312)
T ss_dssp CTTCT------------TCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHH
T ss_pred CCCCC------------CCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccChHH
Confidence 64211 13455 48999999999999753 34688999999999999 5 469999
Q ss_pred HHHcc
Q 013076 187 VLEAG 191 (450)
Q Consensus 187 l~~~~ 191 (450)
+.++.
T Consensus 160 ~a~~~ 164 (312)
T 4f9u_A 160 LAAKL 164 (312)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88753
No 51
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.11 E-value=9e-11 Score=90.08 Aligned_cols=79 Identities=18% Similarity=0.131 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHHHHHHHHH
Q 013076 348 DLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPYGAALHAS 426 (450)
Q Consensus 348 ~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~ 426 (450)
++++.++++++++ |.++ .+..++|+||+++|... +|++. |||+... ...+|++||+|+++++.+++++|+.
T Consensus 2 ~~v~~l~~a~~~~-g~~~--~~~~~~g~TDar~~~~~gip~v~--fGPg~~~---~~~~H~~dE~v~i~~l~~~~~iy~~ 73 (88)
T 1q7l_B 2 PWWAAFSRVCKDM-NLTL--EPEIMPAAGDNRYIRAVGVPALG--FSPMNRT---PVLLHDHDERLHEAVFLRGVDIYTR 73 (88)
T ss_dssp HHHHHHHHHHHHT-TCCE--EEEECCSCSHHHHHHHTTCCEEE--ECCCCSC---CCCTTSTTCEEEHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHc-CCee--EeeeeceeCcHHHHHHcCCCEEE--ECCCCCC---cccccCCCCeeEHHHHHHHHHHHHH
Confidence 5899999999998 8776 45788999999999876 88654 6755421 2469999999999999999999999
Q ss_pred HHHHHHhh
Q 013076 427 LALRYLLE 434 (450)
Q Consensus 427 ~~~~l~~~ 434 (450)
++.++++.
T Consensus 74 ~i~~~~~~ 81 (88)
T 1q7l_B 74 LLPALASV 81 (88)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHcC
Confidence 99999864
No 52
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.10 E-value=1.9e-09 Score=103.73 Aligned_cols=135 Identities=18% Similarity=0.207 Sum_probs=99.3
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcc--hHHHHHHHHHHHHhcCCceeccc-----------CCceEEEEEcC
Q 013076 41 PKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQ--EFETSQLIRSELDKMGIKYKHPV-----------AVTGVVGFIGT 107 (450)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nvva~~~~ 107 (450)
..+++++.+... ...+.++++.++ +|.+.|. ..++++||.+.|+++|++++... ...||||++++
T Consensus 25 ~~~~~~~~~~~~-~~~~~~~l~~il-~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~ 102 (330)
T 4fai_A 25 EPRFLEYSNLSD-KLHLREAIDKIL-IPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNP 102 (330)
T ss_dssp HHHHHHHHTCCC-HHHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCT
T ss_pred HHHHHhcccccH-HHHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECC
Confidence 345666555533 244556666653 6777664 46799999999999999986421 13589999987
Q ss_pred CCCceEEEEeeccCCCCcCcCCCccccCCCCceecccc---hHHHHHHHHHHHHHHhc---cccCCceEEEEEecCCC-C
Q 013076 108 GEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEH---REELKGTVVLVFQPAEE-G 180 (450)
Q Consensus 108 ~~~~~ill~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~dEE-g 180 (450)
+....|++.+|+|+++..+. ...|+ -+|+|++|.+++.|++. +.+++.+|.|+|..+|| |
T Consensus 103 ~~~~~i~l~aHyDs~~~~~~-------------~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~G 169 (330)
T 4fai_A 103 NAERYLVLSCHYDSKYMPGV-------------EFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAF 169 (330)
T ss_dssp TCSEEEEEEEECCCCCCTTS-------------CCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCS
T ss_pred CCCcEEEEEEeecccccccC-------------CCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEecccccc
Confidence 65578999999999975321 13465 38999999999998753 45688999999999999 5
Q ss_pred c--------cchHHHHHc
Q 013076 181 G--------GGAHKVLEA 190 (450)
Q Consensus 181 ~--------~Ga~~l~~~ 190 (450)
. .|++++.++
T Consensus 170 l~~~~~~~llGS~~~a~~ 187 (330)
T 4fai_A 170 EEWGPKDSIYGARHLAKK 187 (330)
T ss_dssp SSCBTTBSCHHHHHHHHH
T ss_pred ccccccchhhhhHHHHhc
Confidence 2 599998874
No 53
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.03 E-value=5.3e-09 Score=104.77 Aligned_cols=100 Identities=20% Similarity=0.216 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHhcC-Cceec--------ccCCceEEEEEcCCC--CceEEEEeeccCCCCcCcCCCccccCCCCceecc
Q 013076 75 FETSQLIRSELDKMG-IKYKH--------PVAVTGVVGFIGTGE--PPFVALRADMDSLPLQEMVEWEYKSKIPGKMHAC 143 (450)
Q Consensus 75 ~~~~~~l~~~l~~~G-~~~~~--------~~~~~nvva~~~~~~--~~~ill~~H~DvVp~~~~~~w~~~~~~~g~l~Gr 143 (450)
.+.++.|.+.|+.-. +.++. .....||++++++.. .+.|++.+|+|+|+. |+
T Consensus 203 ~~da~~L~~~l~~g~~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~-----------------g~ 265 (444)
T 3iib_A 203 NPDADLINAMLKRDKEVVISLELGSERRGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDE-----------------GT 265 (444)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSS-----------------SC
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCCEEEEEeecccCCC-----------------CC
Confidence 345677777775421 32221 112469999997753 478999999999984 34
Q ss_pred cc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHcc
Q 013076 144 GH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAG 191 (450)
Q Consensus 144 G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~~ 191 (450)
|+ +++++++|.+++.|++.+.+++++|+|++..+|| |..|+++++++.
T Consensus 266 Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~ 317 (444)
T 3iib_A 266 GAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGGKTYAKEH 317 (444)
T ss_dssp CTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHHHHHHHHT
T ss_pred CCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCHHHHHHhh
Confidence 44 6899999999999999887889999999999999 779999998864
No 54
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.69 E-value=4.6e-08 Score=97.45 Aligned_cols=106 Identities=17% Similarity=0.199 Sum_probs=77.8
Q ss_pred HcCCCCCcchHHHHHHHHHHH---Hh--cCCceeccc----CCceEEEEEcCC-----CCceEEEEeeccCCCCcCcCCC
Q 013076 65 HQNPELGYQEFETSQLIRSEL---DK--MGIKYKHPV----AVTGVVGFIGTG-----EPPFVALRADMDSLPLQEMVEW 130 (450)
Q Consensus 65 ~~ips~s~~e~~~~~~l~~~l---~~--~G~~~~~~~----~~~nvva~~~~~-----~~~~ill~~H~DvVp~~~~~~w 130 (450)
..||+..-. .+.+++|.+++ ++ .++.++.+. ...||++++++. +.+.|++.+|+|+|+.
T Consensus 162 ~~IP~~~Is-~~~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~------ 234 (421)
T 2ek8_A 162 SFVAAVGIT-KQEGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEK------ 234 (421)
T ss_dssp TCCEEEEEC-HHHHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTT------
T ss_pred CCccEEEeC-HHHHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCC------
Confidence 345554333 33577788888 32 233333221 146999999763 3588999999999985
Q ss_pred ccccCCCCceecccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchHHHHHc
Q 013076 131 EYKSKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEA 190 (450)
Q Consensus 131 ~~~~~~~g~l~GrG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~~l~~~ 190 (450)
|+|+ +++++++|.+++.|++. +++++|+|+++.+|| |..|+++++++
T Consensus 235 -----------g~Ga~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 285 (421)
T 2ek8_A 235 -----------APGANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGSKKYAAS 285 (421)
T ss_dssp -----------CCCTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHHHHHHTT
T ss_pred -----------CCCCCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhHHHHHHh
Confidence 3555 69999999999999874 577999999999999 77899999875
No 55
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.03 E-value=8.1e-06 Score=85.53 Aligned_cols=78 Identities=24% Similarity=0.239 Sum_probs=63.5
Q ss_pred CceEEEEEcCC--CCceEEEEeeccCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHh---ccccCCceEEE
Q 013076 98 VTGVVGFIGTG--EPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQE---HREELKGTVVL 172 (450)
Q Consensus 98 ~~nvva~~~~~--~~~~ill~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~---~~~~~~~~i~~ 172 (450)
-.||+|++++. +.+.|++.+|+|+++.| |-+..+|++++|.+++.|.+ .+.+++++|+|
T Consensus 312 ~~NVi~~i~G~~~~~~~vllgaH~Ds~~~G----------------a~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f 375 (707)
T 3fed_A 312 IYNVVGTIRGSVEPDRYVILGGHRDSWVFG----------------AIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIF 375 (707)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSSC----------------TTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred EEEEEEEEeCCCCCCceEEEeccccCCCCC----------------CccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEE
Confidence 45999999875 35789999999999732 11225899999999999876 35678999999
Q ss_pred EEecCCC-CccchHHHHHcc
Q 013076 173 VFQPAEE-GGGGAHKVLEAG 191 (450)
Q Consensus 173 ~~~~dEE-g~~Ga~~l~~~~ 191 (450)
++..+|| |..|+++++++.
T Consensus 376 ~~~~~EE~Gl~GS~~~~~~~ 395 (707)
T 3fed_A 376 ASWDAEEFGLLGSTEWAEEN 395 (707)
T ss_dssp EEESCGGGTSHHHHHHHHHH
T ss_pred EEeCCccccchhHHHHHHhc
Confidence 9999999 779999998853
No 56
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=97.99 E-value=1.9e-05 Score=81.94 Aligned_cols=78 Identities=18% Similarity=0.211 Sum_probs=63.6
Q ss_pred CceEEEEEcCC--CCceEEEEeeccCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhc----cccCCceEE
Q 013076 98 VTGVVGFIGTG--EPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEH----REELKGTVV 171 (450)
Q Consensus 98 ~~nvva~~~~~--~~~~ill~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~----~~~~~~~i~ 171 (450)
-.||+|++++. +.+.|++.+|+|++..|. -+..+|++++|.+++.|++. +.+++++|+
T Consensus 266 ~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~Ga----------------~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~ 329 (640)
T 3kas_A 266 ILNIFGVIKGFVEPDHYVVVGAQRDAWGPGA----------------AKSGVGTALLLKLAQMFSDMVLKDGFQPSRSII 329 (640)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSCCT----------------TTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEE
T ss_pred EEEEEEEEeCCcCCCCceeeecccCCCCCCC----------------CcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEE
Confidence 46999999775 347899999999984321 11247999999999999864 568999999
Q ss_pred EEEecCCC-CccchHHHHHcc
Q 013076 172 LVFQPAEE-GGGGAHKVLEAG 191 (450)
Q Consensus 172 ~~~~~dEE-g~~Ga~~l~~~~ 191 (450)
|++..+|| |..|+.+++++.
T Consensus 330 f~~~~~EE~gl~GS~~~~~~~ 350 (640)
T 3kas_A 330 FASWSAGDFGSVGATEWLEGY 350 (640)
T ss_dssp EEEESSGGGTSHHHHHHHHHT
T ss_pred EEEECCcccCchhHHHHHHhh
Confidence 99999999 779999999864
No 57
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=94.64 E-value=0.047 Score=53.96 Aligned_cols=77 Identities=10% Similarity=-0.015 Sum_probs=59.3
Q ss_pred CChHHHHHHHHHHHhhcCCccccccC---CCcccchHHHHhhh--cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHH
Q 013076 345 NNNDLHKYFQTVAGDMLDTQKVKVMA---PVMGSEDFSFYQEV--MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPY 419 (450)
Q Consensus 345 ~d~~~~~~~~~~~~~~~g~~~~~~~~---~~~g~tD~~~~~~~--~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~ 419 (450)
.|+.+...+++++++. |.+.+.... ..+|++|++.+... +|++-+|++.. .+|++.|-+..+++..
T Consensus 368 ~~~~~~~~~~~ia~~~-~Ip~Q~~~~gr~d~~gGstig~i~a~~Gi~tvdiGiP~l--------~MHS~~E~~~~~D~~~ 438 (450)
T 2glf_A 368 AHAEFVARVRKVLNEQ-GVIWQVATLGKVDQGGGGTIAKFFAERGSDVIDMGPALL--------GMHSPFEISSKADLFE 438 (450)
T ss_dssp CCHHHHHHHHHHHHHT-TCCEEECCSSSTTSCCCCCTHHHHHTTTSCEEEEECEEB--------STTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeccCCCCCCCcHHHHHhCCCCcEEEechhhc--------ccchHHHHhhHHHHHH
Confidence 4778889999999988 887542112 15567777666533 89988777654 4999999999999999
Q ss_pred HHHHHHHHHHH
Q 013076 420 GAALHASLALR 430 (450)
Q Consensus 420 ~~~~~~~~~~~ 430 (450)
+++++..++.+
T Consensus 439 ~~~l~~af~~~ 449 (450)
T 2glf_A 439 TYVAYRSLMEK 449 (450)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 58
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=94.33 E-value=0.079 Score=52.77 Aligned_cols=80 Identities=11% Similarity=-0.018 Sum_probs=61.4
Q ss_pred CChHHHHHHHHHHHhhcCCccccccCC---CcccchHHHHhh-h-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHH
Q 013076 345 NNNDLHKYFQTVAGDMLDTQKVKVMAP---VMGSEDFSFYQE-V-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPY 419 (450)
Q Consensus 345 ~d~~~~~~~~~~~~~~~g~~~~~~~~~---~~g~tD~~~~~~-~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~ 419 (450)
.|+.+...+++++++. |.+.+..... .+|+|++..... . +|++.++++.. .+|++.|-+..+++..
T Consensus 404 t~~~~~~~l~~ia~~~-~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tvdIGiP~r--------yMHS~~E~~~~~D~~~ 474 (496)
T 3vat_A 404 SNAVSEALIREVASSV-GVPLQDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQL--------AMHSIRETACTTGVLQ 474 (496)
T ss_dssp CCHHHHHHHHHHHHHH-TCCCEEECCCTTSCCCCCHHHHHHHHHTCEEEEEECEEE--------STTSSSEEEESHHHHH
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHhcccCCcEEEecHhhh--------ccccHHHHhhHHHHHH
Confidence 4788999999999988 8765422111 356777765543 3 99988777755 3999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 013076 420 GAALHASLALRYLL 433 (450)
Q Consensus 420 ~~~~~~~~~~~l~~ 433 (450)
+++++..++.++-.
T Consensus 475 ~v~Ll~af~~~~~~ 488 (496)
T 3vat_A 475 TITLFKGFFELFPS 488 (496)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHH
Confidence 99999999887754
No 59
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=93.86 E-value=0.029 Score=55.17 Aligned_cols=76 Identities=11% Similarity=0.037 Sum_probs=59.0
Q ss_pred CChHHHHHHHHHHHhhcCCccccccCC--CcccchHHHHhh--h-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHH
Q 013076 345 NNNDLHKYFQTVAGDMLDTQKVKVMAP--VMGSEDFSFYQE--V-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPY 419 (450)
Q Consensus 345 ~d~~~~~~~~~~~~~~~g~~~~~~~~~--~~g~tD~~~~~~--~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~ 419 (450)
.|..+.+.+++++++. |.+.+..... .+|+||++.+.. . +|++.+|++.. .+|++.|.+..+++..
T Consensus 343 ~~~~~~~~l~~~a~~~-~Ip~Q~~~~~~d~~gGsd~g~i~~~~~Gi~tvdiGip~~--------~mHS~~E~~~~~D~~~ 413 (428)
T 2ijz_A 343 TNSETAGFFRHLCQDS-EVPVQSFVTRSDMGCGSTIGPITASQVGVRTVDIGLPTF--------AMHSIRELAGSHDLAH 413 (428)
T ss_dssp CCHHHHTTTTHHHHHT-CCCCCBCCCCSSCCCCCCCSTTTGGGGSCCEEEECCCCC--------SCSSSSCCCCSSHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEEEeCCCCccchHHHHHHhCCCCCEEEEchhhc--------ccchHHHHhhHHHHHH
Confidence 5888899999999988 8775422111 668899888754 3 89888666643 4999999999999999
Q ss_pred HHHHHHHHHH
Q 013076 420 GAALHASLAL 429 (450)
Q Consensus 420 ~~~~~~~~~~ 429 (450)
.++++..++.
T Consensus 414 ~~~ll~af~~ 423 (428)
T 2ijz_A 414 LVKVLGAFYA 423 (428)
T ss_dssp HHTTHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999988754
No 60
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=92.32 E-value=0.93 Score=43.85 Aligned_cols=70 Identities=16% Similarity=0.066 Sum_probs=50.2
Q ss_pred eEEEEE--cCCCCceEEEEeeccCCCCcCcCCCccccCCCCceecccchHHHHHHHHHHHHHHhccccCCceEEEEEecC
Q 013076 100 GVVGFI--GTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPA 177 (450)
Q Consensus 100 nvva~~--~~~~~~~ill~~H~DvVp~~~~~~w~~~~~~~g~l~GrG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~d 177 (450)
.-++++ ++...+.|+|.+|+|+.-.. ++.. +|+|+++..+++|++. +++.+++|+|.++
T Consensus 167 l~y~e~~ipG~t~~~IllsaH~cHP~~A-----------NDNa------SG~a~lleLar~l~~~--~~~~t~rFvf~pg 227 (435)
T 3k9t_A 167 LTYGEYYIRGELEEEILLTTYTCHPSMC-----------NDNL------SGVALITFIAKALSKL--KTKYSYRFLFAPE 227 (435)
T ss_dssp EEEEEEEECCSSSCEEEEEEECCCCSCT-----------TTTH------HHHHHHHHHHHHHTTS--CCSSEEEEEEECT
T ss_pred eEEEEEEecCCCCCEEEEEEEcCCCCCC-----------Cccc------hHHHHHHHHHHHHhcC--CCCceEEEEEcCc
Confidence 345555 66555999999999983211 1112 7889999999999863 5789999999983
Q ss_pred CCCccchHHHHHcc
Q 013076 178 EEGGGGAHKVLEAG 191 (450)
Q Consensus 178 EEg~~Ga~~l~~~~ 191 (450)
..|+..++.+.
T Consensus 228 ---~iGS~~yl~~~ 238 (435)
T 3k9t_A 228 ---TIGSITWLSRN 238 (435)
T ss_dssp ---THHHHHHHHHC
T ss_pred ---cHHHHHHHHhC
Confidence 45778777653
No 61
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=92.09 E-value=0.08 Score=52.51 Aligned_cols=75 Identities=12% Similarity=0.012 Sum_probs=55.5
Q ss_pred CChHHHHHHHHHHHhhcCCccccccCC----CcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHH
Q 013076 345 NNNDLHKYFQTVAGDMLDTQKVKVMAP----VMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPY 419 (450)
Q Consensus 345 ~d~~~~~~~~~~~~~~~g~~~~~~~~~----~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~ 419 (450)
.|..+.+.+++++++. |.+.+..... .+|+|++..+++. +|++.+|++.. .+|++.|.+..+++..
T Consensus 377 ~~~~~~~~l~~~a~~~-~Ip~Q~~~~~r~d~~~GgT~~~~~a~~Gi~tvdiGiP~~--------~mHS~~E~~~~~Di~~ 447 (458)
T 1y7e_A 377 ADAELVSYIRQLLNKN-NIAWQVATLGKVEEGGGGTVAKFLAGYGIRTIDMGPAVI--------SMHSPMEITSKFDLYN 447 (458)
T ss_dssp -CHHHHHHHHHHHHHH-TCCEEEEEECC-----CHHHHHHHHHHTCEEEEECCEEB--------STTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEEeeccCCCCcCcHHHHHhCCCCCEEEEchhhc--------ccchHHHHhhHHHHHH
Confidence 3778899999999998 8775422121 4467766666655 89888666643 4999999999999999
Q ss_pred HHHHHHHHH
Q 013076 420 GAALHASLA 428 (450)
Q Consensus 420 ~~~~~~~~~ 428 (450)
.++++..++
T Consensus 448 ~~~ll~af~ 456 (458)
T 1y7e_A 448 AYLAYKAFY 456 (458)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHH
Confidence 999998764
No 62
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=91.97 E-value=0.27 Score=49.64 Aligned_cols=81 Identities=12% Similarity=-0.030 Sum_probs=59.2
Q ss_pred CChHHHHHHHHHHHhhc-----CCccccccC---CCcccchHHHHh-hh-cCeEEEEecccCCCCCCCCCCCCCCcccCC
Q 013076 345 NNNDLHKYFQTVAGDML-----DTQKVKVMA---PVMGSEDFSFYQ-EV-MPGYFFFLGMKNETLGKVESIHSPYFTLNE 414 (450)
Q Consensus 345 ~d~~~~~~~~~~~~~~~-----g~~~~~~~~---~~~g~tD~~~~~-~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~ 414 (450)
.|+.+...+++++++.. |.+.+.... ..+|+|++.... +. +|++.++++.. .+|++.|-+..
T Consensus 472 tn~~~~~~l~~iA~~~~~~~~~gIP~Q~~v~rnD~~gGgTig~i~~s~~GIpTvdIGiP~r--------yMHS~~E~~~~ 543 (571)
T 4eme_A 472 TSPLHASLIKRTFELYYNKYKQQIKYQNFMVKNDTPCGSTVGSMVAANLSMPGIDIGIPQL--------AMHSIREIAAV 543 (571)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCSSSCCCCCSHHHHHHHHTCCEEEEECEEE--------STTSSSEEEEH
T ss_pred cCHHHHHHHHHHHHhcccccCCCCCEEEEEEcCCCCCcchHHHHHHhCCCCcEEEechhhh--------ccchHHHHhhH
Confidence 46778888888887751 454331111 135777766554 33 99988777755 39999999999
Q ss_pred CccHHHHHHHHHHHHHHHh
Q 013076 415 DALPYGAALHASLALRYLL 433 (450)
Q Consensus 415 ~~l~~~~~~~~~~~~~l~~ 433 (450)
.++..+++++..++..+-.
T Consensus 544 ~Dv~~~vkLl~aFl~~~~~ 562 (571)
T 4eme_A 544 HDVFFLIKGVFAFYTYYNQ 562 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHH
Confidence 9999999999999987754
No 63
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=90.98 E-value=4.8 Score=39.75 Aligned_cols=113 Identities=14% Similarity=0.027 Sum_probs=70.9
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceeccc-------CCceEE--------------EEEcCC-CCce
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV-------AVTGVV--------------GFIGTG-EPPF 112 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nvv--------------a~~~~~-~~~~ 112 (450)
-+.+.+.|+|+..|.---.....+++.++.+++.|+++++.+ +.+.++ -+|.+. +.++
T Consensus 167 a~~~~~aR~L~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~~~~~~~~ 246 (491)
T 2hc9_A 167 SESVRETARLIDTPANILTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHEVPGSTEH 246 (491)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCTTCSCE
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeCCCCCCCc
Confidence 556789999999998666778899999999999999987521 111222 222221 1233
Q ss_pred EEEEeeccCCCCcCcCCCcccc-----CCCCceec-ccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 113 VALRADMDSLPLQEMVEWEYKS-----KIPGKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 113 ill~~H~DvVp~~~~~~w~~~~-----~~~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
|+|.|- +.+|++ +..+.|.+ +..++|.|+.+++++++.+. +++.+|..++...|=
T Consensus 247 i~LVGK----------GiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l--~l~vnv~~~l~~~EN 307 (491)
T 2hc9_A 247 IALVGK----------GVVYDTGGLQIKTKTGMPNMKRDMGGAAGMLEAYSALVKH--GFSQTLHACLCIVEN 307 (491)
T ss_dssp EEEEEE----------EEEEECCTTSCCCTTTSTTGGGGGHHHHHHHHHHHHHHTT--TCCSEEEEEEEEEEE
T ss_pred EEEEcC----------ceEecCCCccCCCCcChhhccccccHHHHHHHHHHHHHHc--CCCceEEEEEEeeec
Confidence 444332 223432 11122211 11159999999999999876 467888888776665
No 64
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=90.08 E-value=5.2 Score=39.61 Aligned_cols=121 Identities=11% Similarity=0.008 Sum_probs=75.6
Q ss_pred HHHhhhhHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhc-CCceeccc-------CC-------------ce-EEEE
Q 013076 47 FAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKM-GIKYKHPV-------AV-------------TG-VVGF 104 (450)
Q Consensus 47 ~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~~-------~~-------------~n-vva~ 104 (450)
.++.-....+-+.+.|+|+..|.---.....+++.++.++.. |+++++.+ +. +- ++-+
T Consensus 172 ~~~~~~~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~ 251 (497)
T 3h8g_F 172 AVKHASAIATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLN 251 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEE
Confidence 333333346678899999999987677788999999999998 99987521 11 11 2333
Q ss_pred EcC-C-CCceEEEEeeccCCCCcCcCCCcccc----CC-CCceec-ccchHHHHHHHHHHHHHHhccccCCceEEEEEec
Q 013076 105 IGT-G-EPPFVALRADMDSLPLQEMVEWEYKS----KI-PGKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQP 176 (450)
Q Consensus 105 ~~~-~-~~~~ill~~H~DvVp~~~~~~w~~~~----~~-~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 176 (450)
|.+ + ..++|+|.|- +.+|++ .+ .+.|.+ +...+|.|+.+++++++.+. +++.+|..++..
T Consensus 252 y~g~~~~~~~i~LVGK----------GiTFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l--~l~vnv~~~i~~ 319 (497)
T 3h8g_F 252 YQGGKKADKPFVLVGK----------GITFDTGGISLKPGAGMDEMKYDMCGAASVFGTLRAVLEL--QLPVNLVCLLAC 319 (497)
T ss_dssp EECSCTTSCCEEEEEE----------EEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHH--TCSSEEEEEEEE
T ss_pred ECCCCCCCCcEEEEcC----------ceEeccCCccCCCccchhhccccchHHHHHHHHHHHHHHc--CCCeEEEEEEEe
Confidence 322 2 1244555443 223432 11 111211 11149999999999999886 467888888777
Q ss_pred CCC
Q 013076 177 AEE 179 (450)
Q Consensus 177 dEE 179 (450)
.|=
T Consensus 320 ~EN 322 (497)
T 3h8g_F 320 AEN 322 (497)
T ss_dssp EEE
T ss_pred ecc
Confidence 665
No 65
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=89.81 E-value=5.8 Score=39.46 Aligned_cols=115 Identities=12% Similarity=0.034 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcC--Cceeccc-------CCce--------------EEEEEcC-C
Q 013076 53 LVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMG--IKYKHPV-------AVTG--------------VVGFIGT-G 108 (450)
Q Consensus 53 ~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G--~~~~~~~-------~~~n--------------vva~~~~-~ 108 (450)
...+-+.+.|+|+.-|.---.....+++.++.+++.| +++++.+ +.+. ++-+|.+ +
T Consensus 179 ~~a~~~~laRdL~n~P~N~~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~ 258 (503)
T 1gyt_A 179 AIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNA 258 (503)
T ss_dssp HHHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCC
Confidence 3466788999999999876677889999999999999 8887521 1111 2233322 1
Q ss_pred --CCceEEEEeeccCCCCcCcCCCcccc----CC-CCceec-ccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 109 --EPPFVALRADMDSLPLQEMVEWEYKS----KI-PGKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 109 --~~~~ill~~H~DvVp~~~~~~w~~~~----~~-~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
..++|+|.|- +.+|++ .+ .+.|.+ +...+|.|+.+++++++.+. +++.+|..++...|=
T Consensus 259 ~~~~~~i~LVGK----------GITFDsGGislKp~~~M~~MK~DM~GAAaVlg~~~aia~l--~l~vnV~~~i~~~EN 325 (503)
T 1gyt_A 259 SEDARPIVLVGK----------GLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAEL--QLPINVIGVLAGCEN 325 (503)
T ss_dssp CTTCCCEEEEEE----------EEEEECCTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHH--TCSSEEEEEEEEEEE
T ss_pred CCCCCcEEEEcC----------ceEecCCCccccCCcChhhcccccchHHHHHHHHHHHHHc--CCCeeEEEEEEeecc
Confidence 1234444432 234442 11 111211 11149999999999999886 466888888777665
No 66
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=87.77 E-value=3.4 Score=40.53 Aligned_cols=118 Identities=16% Similarity=0.139 Sum_probs=70.2
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceeccc------CCceEEEEEcCC-CCceEEEEeeccCCCCcCc
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV------AVTGVVGFIGTG-EPPFVALRADMDSLPLQEM 127 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~nvva~~~~~-~~~~ill~~H~DvVp~~~~ 127 (450)
-+.+.+.|+|+..|.---.....+++.++.+++.|+++++.+ +.+.+++.=.++ ..|.++...+ . |.+..
T Consensus 167 a~~~~laRdLvn~P~N~~tP~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~pPrli~l~y--~-~~~~~ 243 (482)
T 3ij3_A 167 LTTIYLIRDLINTPAEDMGPSELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSRPPLLIDLKW--G-DIKAP 243 (482)
T ss_dssp HHHHHHHHHHHHSCGGGSSHHHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSSCCEEEEEEE--S-CTTSC
T ss_pred HHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCCCCEEEEEEe--C-CCCCC
Confidence 557889999999998666677889999999999999987521 111122211122 1233333322 1 11100
Q ss_pred ------CCCccccCCCCc-e-ecc---cc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 128 ------VEWEYKSKIPGK-M-HAC---GH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 128 ------~~w~~~~~~~g~-l-~Gr---G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
.+.+|++ +|. | -+. ++ .+|.|+.+++++++.+. +++.+|..++...|=
T Consensus 244 ~i~LVGKGITFDs--GGlslKp~~~M~~MK~DMgGAAaVlg~~~aia~l--~lpvnv~~ii~~~EN 305 (482)
T 3ij3_A 244 KVTLVGKGVCFDS--GGLDIKTPGGMLLMKKDMGGAAHALGLARMIMLQ--QLPVRLRLLIPAVEN 305 (482)
T ss_dssp EEEEEECEEEEEC--CTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHT--TCSSEEEEEEEEEEE
T ss_pred eEEEEccceEeec--CCccCcCccchhhccccchHHHHHHHHHHHHHHc--CCCceEEEEEEeecc
Confidence 1223432 111 0 011 22 49999999999999886 467888888776655
No 67
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=87.63 E-value=7.4 Score=38.48 Aligned_cols=120 Identities=11% Similarity=0.060 Sum_probs=70.8
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcC--Cceeccc-------CCceEEEEEcCC-CCceEEEEeeccCCCC
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMG--IKYKHPV-------AVTGVVGFIGTG-EPPFVALRADMDSLPL 124 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G--~~~~~~~-------~~~nvva~~~~~-~~~~ill~~H~DvVp~ 124 (450)
.+-+.+.|+|+..|.---.....+++.++.+++.| +++++.+ +.+.+++.=.++ ..|.++..-+- |.
T Consensus 161 a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~---g~ 237 (484)
T 1lam_A 161 ASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYK---GS 237 (484)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEE---CS
T ss_pred HHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEEC---CC
Confidence 66788999999999876677889999999999999 8887521 111222221111 12333322221 11
Q ss_pred c-C--------cCCCcccc----CC-CCceec-ccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 125 Q-E--------MVEWEYKS----KI-PGKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 125 ~-~--------~~~w~~~~----~~-~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
+ . ..+.+|++ .+ .+.|.+ +...+|.|+.+++++++.+. +++.+|..++...|=
T Consensus 238 ~~~~~~~i~LVGKGITFDsGG~slKp~~~M~~MK~DMgGAAaVlg~~~aia~l--~l~vnv~~~i~~~EN 305 (484)
T 1lam_A 238 PNASEPPLVFVGKGITFDSGGISIKAAANMDLMRADMGGAATICSAIVSAAKL--DLPINIVGLAPLCEN 305 (484)
T ss_dssp SSTTSCCEEEEECEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHT--TCSSEEEEEEEEEEE
T ss_pred CCCCCCcEEEEecceEEcCCCcCCcCccchhhhhccchHHHHHHHHHHHHHHc--CCCeeEEEEEEeecc
Confidence 0 0 01233442 11 111211 11149999999999999886 466888888776655
No 68
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=87.43 E-value=7.7 Score=38.31 Aligned_cols=114 Identities=12% Similarity=0.037 Sum_probs=71.8
Q ss_pred HHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhc-CCceeccc-------CCce--------------EEEEEcCC-CC
Q 013076 54 VGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKM-GIKYKHPV-------AVTG--------------VVGFIGTG-EP 110 (450)
Q Consensus 54 ~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~~-------~~~n--------------vva~~~~~-~~ 110 (450)
..+-+.+.|+|+..|.---.....+++.++.+++. |+++++.+ +.+. ++-+|.+. ..
T Consensus 175 ~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~ 254 (490)
T 3jru_B 175 TAEGVEFARELGNLPPNYCTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGGDA 254 (490)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTTTS
T ss_pred HHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCCCC
Confidence 36678899999999987667788999999999887 99887521 1111 22233221 22
Q ss_pred ceEEEEeeccCCCCcCcCCCcccc----CC-CCceec-ccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 111 PFVALRADMDSLPLQEMVEWEYKS----KI-PGKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 111 ~~ill~~H~DvVp~~~~~~w~~~~----~~-~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
++|+|.|- +.+|++ .+ .+.|.+ +...+|.|+.+++++++.+. +++.+|..++...|=
T Consensus 255 ~~i~LVGK----------GiTFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l--~l~vnv~~~i~~~EN 317 (490)
T 3jru_B 255 RPYVLVGK----------GITFDTGGVNLKTQGGIEEMKYDMCGGATVIGTFVATVKA--ELPINLVVVVPAVEN 317 (490)
T ss_dssp CCEEEEEC----------EEEEECCTTSCCCSSCGGGGGGGGHHHHHHHHHHHHHHHT--TCSSEEEEEEEEEEE
T ss_pred CcEEEEcC----------eeEecCCCccCCCcccHhhCcccchHHHHHHHHHHHHHHc--CCCcEEEEEEEeecc
Confidence 44444432 233442 11 111211 11149999999999999886 466888888776655
No 69
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=87.41 E-value=6.5 Score=38.94 Aligned_cols=112 Identities=16% Similarity=0.123 Sum_probs=72.1
Q ss_pred HHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceeccc-------CC-------------ce-EEEEEcC-C-CC
Q 013076 54 VGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV-------AV-------------TG-VVGFIGT-G-EP 110 (450)
Q Consensus 54 ~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~-------------~n-vva~~~~-~-~~ 110 (450)
.-+.+.+.|+|+..|.---.....++++++.+++.|+++++.+ +. +- ++-+|.+ + ..
T Consensus 196 ~a~~~~~aRdL~n~P~n~ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~ 275 (515)
T 3kzw_A 196 IGQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDE 275 (515)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSSC
T ss_pred HHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCCC
Confidence 3567889999999998777778899999999999999987521 11 11 2223322 1 12
Q ss_pred ceEEEEeeccCCCCcCcCCCccccCCCCc-e-ec---ccc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 111 PFVALRADMDSLPLQEMVEWEYKSKIPGK-M-HA---CGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 111 ~~ill~~H~DvVp~~~~~~w~~~~~~~g~-l-~G---rG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
++|+|.|- +.+|++ +|. | -+ .++ .+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 276 ~~i~LVGK----------GiTFDs--GG~slKp~~~M~~MK~DM~GAAaVlg~~~a~a~l~--lpvnv~~~i~~~EN 338 (515)
T 3kzw_A 276 APIALVGK----------GITYDS--GGYSIKTKNGMATMKFDMCGAANVVGIIEAASRLQ--LPVNIVGVLACAEN 338 (515)
T ss_dssp CCEEEEEE----------EEEEEC--CTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTT--CSCEEEEEEEEEEE
T ss_pred CcEEEecC----------ceEEec--CCcCCCCccChhhchhchHHHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 44444433 223432 111 0 01 223 499999999999998864 66888887776655
No 70
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=87.17 E-value=14 Score=36.73 Aligned_cols=116 Identities=12% Similarity=0.042 Sum_probs=71.7
Q ss_pred hHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceeccc-------CC-------------ce-EEEEEcCC--C
Q 013076 53 LVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV-------AV-------------TG-VVGFIGTG--E 109 (450)
Q Consensus 53 ~~~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~-------------~n-vva~~~~~--~ 109 (450)
..-+-+.+.|+|+..|.---.....++..++.+++.|+++++.+ +. +- ++-+|.+. .
T Consensus 203 ~~a~~v~laRdLvn~P~N~ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~ 282 (528)
T 3kr4_A 203 VYYFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDV 282 (528)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCC
T ss_pred HHHHHHHHHHHHhhCCccccCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCC
Confidence 34667889999999998766777888999988899999987521 11 11 23333222 1
Q ss_pred CceEEEEeeccCCCCcCcCCCcccc----CC--CC-ceec-ccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 110 PPFVALRADMDSLPLQEMVEWEYKS----KI--PG-KMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 110 ~~~ill~~H~DvVp~~~~~~w~~~~----~~--~g-~l~G-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
.++|+|.|- +.+|++ .+ .| .|.. +...+|.|+.+++++++.+.+ ..+.+|..++...|=
T Consensus 283 ~~~iaLVGK----------GITFDsGG~slKp~~g~~M~~MK~DM~GAAaVlg~~~aia~l~-~~~vnv~~vi~~~EN 349 (528)
T 3kr4_A 283 KKKIALVGK----------GITFDSGGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCVGTLK-PENVEIHFLSAVCEN 349 (528)
T ss_dssp CEEEEEEEE----------EEEEECCTTSCSCSTTCCGGGGGGGGHHHHHHHHHHHHHHHHC-CSSEEEEEEEEEEEE
T ss_pred CCcEEEecC----------ceEeecCCcccCCCCCcCHHHhhcCcchHHHHHHHHHHHHhcC-CCCceEEEEEEeecc
Confidence 345555543 223432 11 11 1211 111499999999999998764 225677777766655
No 71
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=86.77 E-value=7 Score=38.56 Aligned_cols=113 Identities=14% Similarity=0.015 Sum_probs=70.6
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhc-CCceeccc-------CC-------------ce-EEEEEcC-C-CC
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKM-GIKYKHPV-------AV-------------TG-VVGFIGT-G-EP 110 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~~-------~~-------------~n-vva~~~~-~-~~ 110 (450)
.+-+.+.|+|+..|.---.....+++.++.++.. |+++++.+ +. +- ++-+|.+ + ..
T Consensus 164 a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~ 243 (486)
T 3pei_A 164 ACGQNYAKDLQNLPANICTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNEGD 243 (486)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCTTS
T ss_pred HHHHHHHHHHhcCChhhcCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCCCC
Confidence 6678899999999987667788999999999998 89887521 11 11 2233322 1 12
Q ss_pred ceEEEEeeccCCCCcCcCCCcccc----CC-CCceec-ccchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 111 PFVALRADMDSLPLQEMVEWEYKS----KI-PGKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 111 ~~ill~~H~DvVp~~~~~~w~~~~----~~-~g~l~G-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
++|.|.|- +.+|++ .+ .+.|.+ +...+|.|+.+++++++.+. +++.+|..+....|=
T Consensus 244 ~~i~LVGK----------GiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l--~l~vnv~~~i~~~EN 306 (486)
T 3pei_A 244 APIVLVGK----------GLVFDNGGICIKQAAGMDSMKMDMGGVAAVMGTMKAIAML--NLPVNVVGVMGLAEN 306 (486)
T ss_dssp CCEEEEEE----------EEETEECC------------EECSHHHHHHHHHHHHHHHH--TCSSEEEEEEEEEEC
T ss_pred CcEEEEcc----------ceEEecCCcccCCccchhhhhccchHHHHHHHHHHHHHHc--CCCcEEEEEEEeecc
Confidence 44554443 223432 11 111211 11149999999999999886 466888888777665
No 72
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=86.48 E-value=0.31 Score=48.30 Aligned_cols=75 Identities=8% Similarity=-0.027 Sum_probs=55.1
Q ss_pred CChHHHHHHHHHHHhhcCCccccccC---C-CcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCccHH
Q 013076 345 NNNDLHKYFQTVAGDMLDTQKVKVMA---P-VMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDALPY 419 (450)
Q Consensus 345 ~d~~~~~~~~~~~~~~~g~~~~~~~~---~-~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l~~ 419 (450)
.|..+...+++++++. |.+.+.-.. . .+|+|.+..+++. +|++.+|++.. .+|++.|.+..+++..
T Consensus 380 ~~~~~~~~l~~ia~~~-~Ip~Q~~~~gr~d~~~GgTig~~~a~~Gi~tvdiGiP~l--------~MHS~~E~~~~~Di~~ 450 (461)
T 2glj_A 380 ANPEYIAELRRILSKE-SVNWQTAELGKVDQGGGGTIAYILAEYGMQVIDCGVALL--------NMHAPWEISSKADIYE 450 (461)
T ss_dssp CCHHHHHHHHHHHHHT-CCCEEECCSSSSSSSCCCCTHHHHHTTTCBCCBBCCEEE--------STTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEeeeccCCCCcccHHHHHhCCCCCEEEEchhhc--------ccchHHHHhhHHHHHH
Confidence 3778899999999988 877542111 1 3466765555544 89887666643 4999999999999999
Q ss_pred HHHHHHHHH
Q 013076 420 GAALHASLA 428 (450)
Q Consensus 420 ~~~~~~~~~ 428 (450)
.++++..++
T Consensus 451 ~~~l~~af~ 459 (461)
T 2glj_A 451 TKNGYSAFL 459 (461)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHHH
Confidence 999988764
No 73
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=84.74 E-value=7.6 Score=38.39 Aligned_cols=111 Identities=11% Similarity=0.020 Sum_probs=71.1
Q ss_pred HHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhcCCceeccc-------CCce--------------EEEEEcCC--CCc
Q 013076 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV-------AVTG--------------VVGFIGTG--EPP 111 (450)
Q Consensus 55 ~~~~~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~n--------------vva~~~~~--~~~ 111 (450)
-+.+.+.|+|+..|.---.....++++++.+++.|+++++.+ +.+. ++-+|.+. ..+
T Consensus 204 a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~~ 283 (522)
T 4efd_A 204 ATSTQLCQRLVDAPPNLLTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPVK 283 (522)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCSE
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCCC
Confidence 446789999999998766778899999999999999987521 1111 22233221 124
Q ss_pred eEEEEeeccCCCCcCcCCCccccCCCCc-e-eccc---c---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013076 112 FVALRADMDSLPLQEMVEWEYKSKIPGK-M-HACG---H---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (450)
Q Consensus 112 ~ill~~H~DvVp~~~~~~w~~~~~~~g~-l-~GrG---~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (450)
+|.|.|- +.+|++ +|. | -+.| + .+|.|+.+++++++.+. +++.+|..++...|=
T Consensus 284 ~iaLVGK----------GITFDS--GGlsLKp~~~M~~MK~DMgGAAaVlga~~a~a~l--~lpvnV~~vl~~~EN 345 (522)
T 4efd_A 284 KVSLVGK----------GIVYDC--GGLALKPADYMKLMKHDMGGAAAVFCGFLTAVRL--QQPVQLSCTLCLAEN 345 (522)
T ss_dssp EEEEEEE----------EEETCC--CCSSSCHHHHHHHGGGTTHHHHHHHHHHHHHHHH--TCSEEEEEEEEEEEC
T ss_pred cEEEecC----------ceEeec--CCccCCCccchhhcccccchHHHHHHHHHHHHHc--CCCceEEEEEEEecc
Confidence 4444433 223432 121 0 0222 2 49999999999999876 467888888777665
No 74
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=81.52 E-value=0.44 Score=46.80 Aligned_cols=62 Identities=13% Similarity=0.142 Sum_probs=42.9
Q ss_pred HHHhHcCCCCCcchHHHHHHHHHHHHhcCCc---------------eecccCCceEEEEEcCCC----CceEEEEeeccC
Q 013076 61 RRKIHQNPELGYQEFETSQLIRSELDKMGIK---------------YKHPVAVTGVVGFIGTGE----PPFVALRADMDS 121 (450)
Q Consensus 61 l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~---------------~~~~~~~~nvva~~~~~~----~~~ill~~H~Dv 121 (450)
.++++.+=+-+..++.+.++++++|++.||. +..+....|++|...+.. .+.+++.+|+|.
T Consensus 5 ~~~~~~fl~~~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Ds 84 (428)
T 2ijz_A 5 NQGLIDFLKASPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDS 84 (428)
T ss_dssp ---CCCSSTTTHHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCc
Confidence 3456666666777888999999999999982 222223378999864422 378999999999
Q ss_pred C
Q 013076 122 L 122 (450)
Q Consensus 122 V 122 (450)
+
T Consensus 85 p 85 (428)
T 2ijz_A 85 P 85 (428)
T ss_dssp S
T ss_pred C
Confidence 8
No 75
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=80.43 E-value=7.7 Score=35.74 Aligned_cols=85 Identities=14% Similarity=0.120 Sum_probs=53.4
Q ss_pred ChHHHHHHHHHHHhhc-CCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcccCCCcc-----H
Q 013076 346 NNDLHKYFQTVAGDML-DTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFTLNEDAL-----P 418 (450)
Q Consensus 346 d~~~~~~~~~~~~~~~-g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~i~~~~l-----~ 418 (450)
++.+.+.+++.+++.. +.... ......+++|...|.+. +|++.++...... .....|++.+.++.-+. .
T Consensus 198 ~~~l~~~l~~~a~~~~~~i~~~-~~~~~~~~sD~~~f~~~GiP~~~~~~~~~~~---~~~~yHt~~Dt~~~~d~~~~~~~ 273 (299)
T 1rtq_A 198 DSNFTQYLTQLMDEYLPSLTYG-FDTCGYACSDHASWHNAGYPAAMPFESKFND---YNPRIHTTQDTLANSDPTGSHAK 273 (299)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEE-EECCSSCCSTHHHHHHTTCCEECEESSCGGG---SCTTTTSTTCCGGGSCTTCHHHH
T ss_pred CchHHHHHHHHHHHhCccCCcc-cCCCCCCCCcHHHHHHCCCCEEEeccccccc---CCCCCCCccccccccCccHHHHH
Confidence 4567777777766652 22211 11123367898888776 9987544321110 12458999988876655 7
Q ss_pred HHHHHHHHHHHHHHhh
Q 013076 419 YGAALHASLALRYLLE 434 (450)
Q Consensus 419 ~~~~~~~~~~~~l~~~ 434 (450)
..++++..++.++.+.
T Consensus 274 ~~~~l~~~~~~~La~~ 289 (299)
T 1rtq_A 274 KFTQLGLAYAIEMGSA 289 (299)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCC
Confidence 8889999999888754
No 76
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=78.72 E-value=1.4 Score=43.63 Aligned_cols=57 Identities=16% Similarity=0.048 Sum_probs=36.3
Q ss_pred hHcCCCCCcchHHHHHHHHHHHHhcCCc-------------eecccCCceEEEEE--cCC---CCceEEEEeeccCC
Q 013076 64 IHQNPELGYQEFETSQLIRSELDKMGIK-------------YKHPVAVTGVVGFI--GTG---EPPFVALRADMDSL 122 (450)
Q Consensus 64 l~~ips~s~~e~~~~~~l~~~l~~~G~~-------------~~~~~~~~nvva~~--~~~---~~~~ill~~H~DvV 122 (450)
++.+=+-|..++.+.++++++|++.||. +..+. ..+.++.+ +.. .++. ++.+|+|..
T Consensus 25 ~~~fl~~spT~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~r-~g~~i~a~~~G~~~~~~g~~-ii~AH~Dsp 99 (458)
T 1y7e_A 25 YKKFISKFKTEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYTC-REKSVAFAIIGKNPIEDGMN-FIVSHTDSP 99 (458)
T ss_dssp HHHHHHHCCSHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECBC-SSSCBCCEECCSSCGGGCCE-ECCCBCCCC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCeEEEEC-CCCEEEEEEeCCCCCCCCcE-EEEEccCcC
Confidence 3333333445678999999999999986 22222 23444433 332 2345 999999998
No 77
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=75.97 E-value=4 Score=40.14 Aligned_cols=53 Identities=19% Similarity=0.091 Sum_probs=38.6
Q ss_pred CCcchHHHHHHHHHHHHhcCCcee--c-----------ccCCceEEEEEcCCC--CceEEEEeeccCC
Q 013076 70 LGYQEFETSQLIRSELDKMGIKYK--H-----------PVAVTGVVGFIGTGE--PPFVALRADMDSL 122 (450)
Q Consensus 70 ~s~~e~~~~~~l~~~l~~~G~~~~--~-----------~~~~~nvva~~~~~~--~~~ill~~H~DvV 122 (450)
-+..++.+.+++++.|++.||.-- . +....|++|...+.+ .+.+++.+|+|-+
T Consensus 29 ~s~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp 96 (450)
T 2glf_A 29 KAKTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSP 96 (450)
T ss_dssp HCSSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCC
T ss_pred cCCCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccC
Confidence 344678899999999999999641 1 111358999764432 3789999999988
No 78
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=71.81 E-value=7.1 Score=40.78 Aligned_cols=52 Identities=23% Similarity=0.273 Sum_probs=42.4
Q ss_pred ChhHHHHHHHHhhhhHHHHHHHHHHhHcCCCCCcc--hHHHHHHHHHHHHhcCCc-eec
Q 013076 39 DIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQ--EFETSQLIRSELDKMGIK-YKH 94 (450)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~-~~~ 94 (450)
.+.+.+.+.++. +.+.+.++.|.++|..+|. +.++++|+++.|+++|++ ++.
T Consensus 13 ~l~~~~~~~~~~----~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~ 67 (707)
T 3fed_A 13 SIRWKLVSEMKA----ENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKL 67 (707)
T ss_dssp CHHHHHHHHCCH----HHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhCCH----HHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeE
Confidence 455666666666 6689999999999999885 467899999999999998 654
No 79
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=71.00 E-value=6.9 Score=36.34 Aligned_cols=60 Identities=12% Similarity=0.158 Sum_probs=45.3
Q ss_pred cccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCC---cccCCCccHHHHHHHHHHHHHHHhhcCCC
Q 013076 373 MGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPY---FTLNEDALPYGAALHASLALRYLLEFGPE 438 (450)
Q Consensus 373 ~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~---E~i~~~~l~~~~~~~~~~~~~l~~~~~~~ 438 (450)
.+.+|-..|.+. +|++.+..++.. ...|+++ |+|+.+.|....+++..++.+|++.+...
T Consensus 241 ~~~SDH~pF~~~GIP~l~~~~~~~~------~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~~~~~P 304 (312)
T 4f9u_A 241 LVDDDHRPFLDENVPVLHLVATPFP------DVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLKRHTSP 304 (312)
T ss_dssp CCCCTTHHHHTTTCCEEEEECSSCC------TTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCchHHHHHCCCCEEEEECCCCC------CCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 346787777777 998876544321 3478876 67889999999999999999999875543
No 80
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=68.50 E-value=18 Score=35.10 Aligned_cols=72 Identities=14% Similarity=0.140 Sum_probs=49.0
Q ss_pred HHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCCcc---cCCCccHHHHHHHHHHH
Q 013076 353 FQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPYFT---LNEDALPYGAALHASLA 428 (450)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~E~---i~~~~l~~~~~~~~~~~ 428 (450)
..+..+++ |.+ . .....+++|...|.+. +|++.+.-.+. ....|++... ++.+.+...++++..++
T Consensus 327 ~~~~~~~~-~~~-~--~~~~~~~SD~~~F~~~GIP~~~~~~~~~------~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~ 396 (421)
T 2ek8_A 327 GAAASSRL-SGV-L--PYGQEGRSDHESFHALGIPAALFIHAPV------EPWYHTPNDTLDKISKEKLDNVADIVGSAV 396 (421)
T ss_dssp HHHHHHHH-TSC-C--CEEECCSSTHHHHHTTTCCEEEEEEESC------CTTTTSTTCCGGGBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc-CCC-C--CCCCCCCCccHHHHHCCCCEEEEECCcC------CCCCCCcccchhhCCHHHHHHHHHHHHHHH
Confidence 33444554 554 2 2334578898888776 99876441221 1348998876 88899999999999999
Q ss_pred HHHHhh
Q 013076 429 LRYLLE 434 (450)
Q Consensus 429 ~~l~~~ 434 (450)
.++.+.
T Consensus 397 ~~la~~ 402 (421)
T 2ek8_A 397 YQAARP 402 (421)
T ss_dssp HHHHSS
T ss_pred HHHhCC
Confidence 998754
No 81
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=62.79 E-value=35 Score=23.57 Aligned_cols=63 Identities=13% Similarity=0.181 Sum_probs=42.4
Q ss_pred CeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhhCCeEEEEeeccCCCCCCCccCC---hHHHHHHHHHHHhhcCCcc
Q 013076 290 DSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINN---NDLHKYFQTVAGDMLDTQK 365 (450)
Q Consensus 290 ~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~g~~~ 365 (450)
+.-++++|+|...+...+...+++++.+..... -.+.++.. . .+| .++...+.+..+++ |...
T Consensus 15 dgqeieidirvstgkeleralqelekalaraga---rnvqitis----a-----endeqakelleliarllqkl-gykd 80 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARAGA---RNVQITIS----A-----ENDEQAKELLELIARLLQKL-GYKD 80 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHHTC---SEEEEEEE----C-----SSHHHHHHHHHHHHHHHHHH-TCSE
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhccc---cceEEEEE----e-----cChHHHHHHHHHHHHHHHHh-CCCc
Confidence 556899999999999999999999988876531 13444431 1 122 34666776777776 6543
No 82
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=58.22 E-value=17 Score=36.07 Aligned_cols=47 Identities=13% Similarity=0.080 Sum_probs=40.2
Q ss_pred CceEEEEEEecCCCCCCCCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHHh
Q 013076 271 SQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAV 323 (450)
Q Consensus 271 ~~t~~i~~i~gG~~~nviP~~a~~~idiR~~~~~~~~~~~~~i~~~~~~~~~~ 323 (450)
.+|+|++.+.. -++++++.+++|++++.+.+++.++++++++.....
T Consensus 347 ~~S~n~gv~~~------~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~ 393 (490)
T 3mru_A 347 ETSLNVGVITT------EENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQ 393 (490)
T ss_dssp EEEEEEEEEEE------ETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCE
T ss_pred eEEEEEEEEEE------eCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCe
Confidence 67888888864 368899999999999999999999999999875443
No 83
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=52.03 E-value=16 Score=34.19 Aligned_cols=57 Identities=18% Similarity=0.132 Sum_probs=40.1
Q ss_pred ccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCC---cccCCCccHHHHHHHHHHHHHHHhhcC
Q 013076 374 GSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPY---FTLNEDALPYGAALHASLALRYLLEFG 436 (450)
Q Consensus 374 g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~---E~i~~~~l~~~~~~~~~~~~~l~~~~~ 436 (450)
..+|-..|.+. +|++.+ ++... ....|+++ |+|+.+.+....+++..++.+|+..+.
T Consensus 267 ~~SDH~pF~~~GIP~l~~-i~~~~-----~~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~EyL~~~~ 327 (330)
T 4fai_A 267 IEDDHIPFLRRNVPILHL-IPVPF-----PSVWHTPDDNASVIDYATTDNLALIIRLFALEYLLAGT 327 (330)
T ss_dssp CCSTTHHHHTTTCCEEEE-CCSSC-----CTTTTSTTSSGGGCCHHHHHHHHHHHHHHHHHHHTC--
T ss_pred CCCchHHHHHCCCCEEEE-ECCCC-----CCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHHhhCC
Confidence 35787777776 998754 32221 23478876 567888899999999999999886544
No 84
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=48.69 E-value=25 Score=32.95 Aligned_cols=56 Identities=14% Similarity=0.084 Sum_probs=42.5
Q ss_pred CcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCC---cccCCCccHHHHHHHHHHHHHHHh
Q 013076 372 VMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPY---FTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 372 ~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~---E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
..+.+|-..|.+. +|++.+.-.+. ....|++. |+|+.+.+.+..+++..++.++|.
T Consensus 270 ~~~~SDH~pF~~~GIP~~~~~~~~f------~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~Eyl~ 329 (330)
T 3pb6_X 270 GSVEDDHIPFLRRGVPVLHLISTPF------PAVWHTPADTEVNLHPPTVHNLCRILAVFLAEYLG 329 (330)
T ss_dssp CCCSCTTHHHHTTTCCEEEEECSSC------CTTTTSTTCSGGGSCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCchHhHHHCCCCEEEEEcCCC------CCCCCCCcCchhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 4467887777777 99876543221 23578875 678999999999999999999984
No 85
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=47.55 E-value=11 Score=37.17 Aligned_cols=35 Identities=26% Similarity=0.216 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CccchH
Q 013076 147 GHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAH 185 (450)
Q Consensus 147 g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-g~~Ga~ 185 (450)
.++.++|.|++ +.. .++.++.++++..|| |+.|+.
T Consensus 264 ~~~~~~l~al~---~~~-~~~~~~~~~~~d~EEVGs~ga~ 299 (461)
T 2glj_A 264 ICAYTSFEAML---EMK-NAKKTCITILVDKEEVGSIGAT 299 (461)
T ss_dssp HHHHHHHHHHH---TCC-SCSSCEEEEEECCGGGTCCTTT
T ss_pred HHHHHHHHHHH---hhc-cCCCeEEEEEEccCCCCCcccc
Confidence 55566555544 432 467899999999999 766543
No 86
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=46.05 E-value=60 Score=29.88 Aligned_cols=80 Identities=11% Similarity=0.081 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhhcCCccc-cccCCCcccchHHHHhh-h-cCeEEEEe-cccCCCCCCCCCCCCCC---cccCCCccHHHH
Q 013076 349 LHKYFQTVAGDMLDTQKV-KVMAPVMGSEDFSFYQE-V-MPGYFFFL-GMKNETLGKVESIHSPY---FTLNEDALPYGA 421 (450)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~-~~~~~~~g~tD~~~~~~-~-~p~~~~~~-G~~~~~pg~~~~~H~~~---E~i~~~~l~~~~ 421 (450)
+++.+.+.++.+ |.... .........+|-..|.+ . +|++.+.. ++... .+.....|+++ |+|+.+.+....
T Consensus 222 l~~~~~~~a~~~-g~~~~f~~~~~g~~~sDh~~f~~~~GiP~~~li~~~~~~~-~~~~~~~Ht~~Dt~d~id~~~l~~~~ 299 (309)
T 3tc8_A 222 IVEMVWSAARDL-GYGKYFINAAGGAITDDHQYVISGRNIPSIDIINYDPESK-TGFASYWHTQKDNMENIDRETLKAAG 299 (309)
T ss_dssp HHHHHHHHHHHH-TCTTTEEEEECCCCCCHHHHHHHHHCCCEEEEEBCCTTSS-SSSCTTTTSTTCSGGGBCHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCcceeccCCCCCCCCccHHHHhcCCCCEEEEecccCccc-CCCCCCCCCCcCChhhCCHHHHHHHH
Confidence 455555555555 64321 11111223689888887 5 99876432 11000 01235699998 899999999999
Q ss_pred HHHHHHHHH
Q 013076 422 ALHASLALR 430 (450)
Q Consensus 422 ~~~~~~~~~ 430 (450)
+++..++++
T Consensus 300 ~~~~~~vy~ 308 (309)
T 3tc8_A 300 QTVLEVIYN 308 (309)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999988875
No 87
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=36.96 E-value=35 Score=31.72 Aligned_cols=53 Identities=17% Similarity=0.168 Sum_probs=39.6
Q ss_pred cchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCCC---cccCCCccHHHHHHHHHHHHHHHh
Q 013076 375 SEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSPY---FTLNEDALPYGAALHASLALRYLL 433 (450)
Q Consensus 375 ~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~~---E~i~~~~l~~~~~~~~~~~~~l~~ 433 (450)
.+|-..|.+. +|++.+..++.. ...|++. ++++.+.+....+++..++.+++.
T Consensus 272 ~sDh~~F~~~GiP~~~~~~~~~~------~~yHt~~Dt~~~ld~~~l~~~~~~~~~~v~eyl~ 328 (329)
T 2afw_A 272 QDDHIPFLRRGVPVLHLIPSPFP------EVWHTMDDNEENLDESTIDNLNKILQVFVLEYLH 328 (329)
T ss_dssp CSTTHHHHTTTCCEEEECCSSCC------TTTTSTTCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHhHHHCCCCEEEEEcCCCC------CCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 4787777766 998776554321 3578875 567888899999999999999874
No 88
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=35.07 E-value=47 Score=32.39 Aligned_cols=82 Identities=17% Similarity=0.076 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhhcCCccccccCCCcccchHHHHhhh-cCeEEEEecccCCCCCCCCCCCCC---CcccCCCccHHHHHHH
Q 013076 349 LHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEV-MPGYFFFLGMKNETLGKVESIHSP---YFTLNEDALPYGAALH 424 (450)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~---~E~i~~~~l~~~~~~~ 424 (450)
+++.+.+.++.. |..+ ......+++|...|.+. +|++.+...+.. .....|++ -++|+.+.|...++++
T Consensus 351 ~~~~~~~~~~~~-g~~~--~~~~~~~~SD~~~f~~~GiP~~~l~~~~~~----~~~~yHt~~Dt~d~id~~~l~~~~~~~ 423 (444)
T 3iib_A 351 PVINAMKVAEPL-GVAA--GNNKASGGPDVSMLPALGVPVASLRQDGSD----YFDYHHTPNDTLDKINPEALAQNVAVY 423 (444)
T ss_dssp HHHHHGGGGGGG-TCEE--CCSCCCCCGGGTTSGGGTCCEEEEEECCTT----GGGTTTSTTCCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc-CCcc--ccCCCCCCCccHHHHHCCCCEEEeecCCCc----CCCCCCCCccccccCCHHHHHHHHHHH
Confidence 444444443333 4432 13456788999888877 998766553221 12358998 5789999999999999
Q ss_pred HHHHHHHHhhcCC
Q 013076 425 ASLALRYLLEFGP 437 (450)
Q Consensus 425 ~~~~~~l~~~~~~ 437 (450)
+.++..+.+....
T Consensus 424 ~~~v~~lA~~~~~ 436 (444)
T 3iib_A 424 AQFAWVMANSKVE 436 (444)
T ss_dssp HHHHHHHHHCCCC
T ss_pred HHHHHHHhcCCCC
Confidence 9999999875443
No 89
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=27.95 E-value=48 Score=34.08 Aligned_cols=49 Identities=6% Similarity=0.107 Sum_probs=37.4
Q ss_pred hhHHHHHHHHhhhhHHHHHHHHHHhHc---CCCCCc--chHHHHHHHHHHHHhcCCce
Q 013076 40 IPKKLLNFAKRQELVGWMIGIRRKIHQ---NPELGY--QEFETSQLIRSELDKMGIKY 92 (450)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~l~~l~~---ips~s~--~e~~~~~~l~~~l~~~G~~~ 92 (450)
+.+.+.+.++.. .+.+.++.|.+ -|..+| .+.++++||++.|+++|++.
T Consensus 7 l~~~l~~~i~~~----~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~~ 60 (640)
T 3kas_A 7 LKRKLSEKLDST----DFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSK 60 (640)
T ss_dssp HHHHHHHHHHTC----CHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHhCCHH----HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCcc
Confidence 455677777774 48888888888 365555 45779999999999999974
No 90
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=26.95 E-value=1.6e+02 Score=26.78 Aligned_cols=79 Identities=11% Similarity=0.003 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhhcCCcc-ccccCCCcccchHHHHhh-h-cCeEEEEecccCCCCCCCCCCCCCC---cccCCCccHHHH
Q 013076 348 DLHKYFQTVAGDMLDTQK-VKVMAPVMGSEDFSFYQE-V-MPGYFFFLGMKNETLGKVESIHSPY---FTLNEDALPYGA 421 (450)
Q Consensus 348 ~~~~~~~~~~~~~~g~~~-~~~~~~~~g~tD~~~~~~-~-~p~~~~~~G~~~~~pg~~~~~H~~~---E~i~~~~l~~~~ 421 (450)
.+.+.+.+..... +... .........++|-..|.+ . +|++.+...... -+.....|++. |+|+.+.|....
T Consensus 222 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~sDh~~F~~~~GIP~l~~~~~~~~--~~~~~~yHT~~Dt~d~id~~~L~~vg 298 (309)
T 4fuu_A 222 DINKKVWKAAKKA-GYGKTFIDERGDTITDDHLFINRLARIKTIDIIPNDPE--TGFPPTWHTIHDNMDHIDKNTLKAVG 298 (309)
T ss_dssp HHHHHHHHHHHHT-TCTTTEEEEECCCCCCHHHHHHHHTCCCEEEECBC------CCCTTTTSTTCSGGGBCHHHHHHHH
T ss_pred HHHHHHHHHHHhc-CCcccccccCCCCCCCChHHHHhcCCCCEEEEeccCCC--CCCCCCCCCcccchhhCCHHHHHHHH
Confidence 4555555555554 3321 111223345678888875 3 998754322111 01123578886 456666666655
Q ss_pred HHHHHHHH
Q 013076 422 ALHASLAL 429 (450)
Q Consensus 422 ~~~~~~~~ 429 (450)
+++..++.
T Consensus 299 ~~vl~~ly 306 (309)
T 4fuu_A 299 QTVLEVIY 306 (309)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55555543
Done!